# RGD-PIPELINE: ftp-file-extracts # MODULE: genes build 2025-08-22 # GENERATED-ON: 2025/08/23 # PURPOSE: information about active Black Rat genes extracted from RGD database # SPECIES: Rattus rattus (black rat) NCBI:txid10117 # CONTACT: rgd.data@mcw.edu # FORMAT: tab delimited text # NOTES: multiple values in a single column are separated by ';' # #COLUMN INFORMATION: # (First 38 columns are in common between all species) # #1 GENE_RGD_ID the RGD_ID of the gene #2 SYMBOL official gene symbol #3 NAME gene name #4 GENE_DESC gene description (if available) #5 (UNUSED) blank #6 CHROMOSOME_1 chromosome for reference assembly build 1 #7 (UNUSED) blank #8 FISH_BAND fish band information #9 (UNUSED) blank #10 (UNUSED) blank #11 (UNUSED) blank #12 START_POS_1 start position for reference assembly build 1 #13 STOP_POS_1 stop position for reference assembly build 1 #14 STRAND_1 strand information for reference assembly build 1 #15 (UNUSED) blank #16 (UNUSED) blank #17 (UNUSED) blank #18 CURATED_REF_RGD_ID RGD_ID of paper(s) used to curate gene #19 CURATED_REF_PUBMED_ID PUBMED_ID of paper(s) used to curate gene #20 UNCURATED_PUBMED_ID PUBMED ids of papers associated with the gene at NCBI but not used for curation #21 NCBI_GENE_ID NCBI Gene ID #22 UNIPROT_ID UniProtKB id(s) #23 GENE_REFSEQ_STATUS gene RefSeq Status (from NCBI) #24 GENBANK_NUCLEOTIDE GenBank Nucleotide ID(s) #25 (UNUSED) blank #26 GENBANK_PROTEIN GenBank Protein ID(s) #27 CANONICAL_PROTEIN UniProt canonical protein(s) #28 MARKER_RGD_ID RGD_ID(s) of markers associated with given gene #29 MARKER_SYMBOL marker symbol #30 OLD_SYMBOL old symbol alias(es) #31 OLD_NAME old name alias(es) #32 QTL_RGD_ID RGD_ID(s) of QTLs associated with given gene #33 QTL_SYMBOL QTL symbol #34 NOMENCLATURE_STATUS nomenclature status #35 (UNUSED) blank #36 (UNUSED) blank #37 GENE_TYPE gene type #38 ENSEMBL_ID Ensembl Gene ID #39 CHROMOSOME_ENSEMBL chromosome for primary Ensembl assembly #40 START_POS_ENSEMBL start position for primary Ensembl assembly #41 STOP_POS_ENSEMBL stop position for primary Ensembl assembly #42 STRAND_ENSEMBL strand information for primary Ensembl assembly GENE_RGD_ID SYMBOL NAME GENE_DESC (UNUSED) CHROMOSOME_1 (UNUSED) FISH_BAND (UNUSED) (UNUSED) (UNUSED) START_POS_1 STOP_POS_1 STRAND_1 (UNUSED) (UNUSED) (UNUSED) CURATED_REF_RGD_ID CURATED_REF_PUBMED_ID UNCURATED_PUBMED_ID NCBI_GENE_ID UNIPROT_ID GENE_REFSEQ_STATUS GENBANK_NUCLEOTIDE (UNUSED) GENBANK_PROTEIN CANONICAL_PROTEIN MARKER_RGD_ID MARKER_SYMBOL OLD_SYMBOL OLD_NAME QTL_RGD_ID QTL_SYMBOL NOMENCLATURE_STATUS (UNUSED) (UNUSED) GENE_TYPE ENSEMBL_ID CHROMOSOME_ENSEMBL START_POS_ENSEMBL STOP_POS_ENSEMBL STRAND_ENSEMBL 625831825 Atp10a ATPase phospholipid transporting 10A (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN positive regulation of membrane tubulation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) 2 140515396 140675229 - 22301074;30032202 116892035 MODEL JAAIVD010000001;XM_032893496 XP_032749387 probable phospholipid-transporting ATPase VA protein-coding 625831850 Otud6b OTU deubiquitinase 6B ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); negative regulation of translation (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Intellectual Developmental Disorder with Dysmorphic Facies, Seizures, and Distal Limb Anomalies (ortholog); FOUND IN eukaryotic translation initiation factor 4F complex (ortholog) 1 128967657 128984459 + 30032202 116903227 MODEL JAAIVD010000025;XM_032905604;XM_032905612 XP_032761495;XP_032761503 deubiquitinase OTUD6B protein-coding 625831867 Rgr retinal G protein coupled receptor ASSOCIATED WITH cone dystrophy (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN plasma membrane (ortholog) 13 15507534 15521159 - 22301074 116914811 MODEL JAAIVD010000008;XM_032919266;XM_032919267 XP_032775157;XP_032775158 RPE-retinal G protein-coupled receptor protein-coding 625831878 LOC116911775 uncharacterized LOC116911775 10 17987385 17990312 - 116911775 MODEL JAAIVD010000005;XR_004389341 ncrna 625831884 Krt28 keratin 28 9 55071568 55081968 + 22301074;30032202 116908966 MODEL JAAIVD010000002;XM_032912427;XM_032912428 XP_032768318;XP_032768319 keratin, type I cytoskeletal 28 protein-coding 625831897 Marchf9 membrane associated ring-CH-type finger 9 ASSOCIATED WITH familial melanoma (ortholog); FOUND IN Golgi stack (ortholog); trans-Golgi network (ortholog) 1 205485322 205489574 - 22301074;30032202 116909782 MODEL JAAIVD010000025;XM_032913477 XP_032769368 E3 ubiquitin-protein ligase MARCH9 protein-coding 625831905 LOC116904666 U7 small nuclear RNA 6 41070870 41070928 - 116904666 MODEL JAAIVD010000024;XR_004388366 snrna 625831908 LOC116914866 neutrophil antibiotic peptide NP-4-like 13 64854640 64856811 - 22301074;30032202 116914866 MODEL JAAIVD010000008;XM_032919313 XP_032775204 protein-coding 625831915 Proser2 proline and serine rich 2 14 12423954 12436932 - 116883823 MODEL JAAIVD010000009;XM_032885077 XP_032740968 proline and serine-rich protein 2 protein-coding 625831922 Caln1 calneuron 1 FOUND IN trans-Golgi network membrane (ortholog) 16 23133275 23595767 - 22301074 116885565 MODEL JAAIVD010000004;XM_032886858;XM_032886859 XP_032742749;XP_032742750 calcium-binding protein 8 protein-coding 625831936 LOC116914142 small nucleolar RNA SNORA17 12 27118514 27118645 + 116914142 MODEL JAAIVD010000007;XR_004389700 snorna 625831939 Shf Src homology 2 domain containing F PARTICIPATES IN platelet-derived growth factor signaling pathway 5 100456841 100476437 - 30032202 116901888 MODEL JAAIVD010000023;XM_032904095;XM_032904096;XM_032904097 XP_032759986;XP_032759987;XP_032759988 SH2 domain-containing adapter protein F protein-coding 625831952 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 863712 863784 + 116910800 MODEL JAAIVD010000002 trna 625831953 Hoxd4 homeobox D4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog) 5 52053254 52070463 + 22301074;30032202 116901532 MODEL JAAIVD010000023;XM_032903512 XP_032759403 homeobox protein Hox-D4 protein-coding 625831963 Sorcs3 sortilin related VPS10 domain containing receptor 3 INVOLVED IN learning (ortholog); memory (ortholog); positive regulation of synaptic transmission (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 2 47724147 48341429 + 22301074;30032202 116891276 MODEL JAAIVD010000001;XM_032892177 XP_032748068 VPS10 domain-containing receptor SorCS3 protein-coding 625831994 Mrpl46 mitochondrial ribosomal protein L46 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); mitochondrial large ribosomal subunit (ortholog) 2 121461366 121470106 + 30032202 116891955 MODEL JAAIVD010000001;XM_032893397 XP_032749288 39S ribosomal protein L46, mitochondrial protein-coding 625832002 Gzma granzyme A ENCODES a protein that exhibits protein homodimerization activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN cytotoxic T cell pyroptotic cell death (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); negative regulation of endodeoxyribonuclease activity (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 3 183671524 183683071 + 22301074;30032202 116895651 MODEL JAAIVD010000012;XM_032896857 XP_032752748 protein-coding 625832011 LOC116898469 elongation factor 1-alpha 1-like 4 108133937 108197521 + 116898469 MODEL JAAIVD010000003 pseudo 625832012 Fancl FA complementation group L ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); gamete generation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nuclear body (ortholog) 11 91222600 91289554 + 30032202 116912388 MODEL JAAIVD010000006;XM_032916447 XP_032772338 E3 ubiquitin-protein ligase FANCL protein-coding 625832030 Dync1i2 dynein cytoplasmic 1 intermediate chain 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND STRUCTURAL BRAIN ANOMALIES (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); microtubule (ortholog) 5 48506236 48555946 + 22301074;30032202 116901502 MODEL JAAIVD010000023;XM_032903471;XM_032903472 XP_032759362;XP_032759363 cytoplasmic dynein 1 intermediate chain 2 protein-coding 625832057 LOC116908168 uncharacterized LOC116908168 8 45583973 45588418 - 116908168 MODEL JAAIVD010000027;XM_032911466 XP_032767357 uncharacterized protein LOC116908168 protein-coding 625832065 LOC116891645 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 2 88727669 88728101 + 116891645 MODEL JAAIVD010000001;XM_032892878 XP_032748769 protein-coding 625832070 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 80991408 80991480 - 116895144 MODEL JAAIVD010000001 trna 625832071 LOC116902044 protein PET117 homolog, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 19 (ortholog); FOUND IN mitochondrion (ortholog) 5 124009767 124014801 + 30032202 116902044 MODEL JAAIVD010000023;XM_032904329 XP_032760220 protein-coding 625832077 LOC116890410 U6 spliceosomal RNA 1 60469957 60470055 + 116890410 MODEL JAAIVD010000025 pseudo 625832078 LOC116906720 zinc finger protein 878-like 1 157258471 157262728 - 30032202 116906720 MODEL JAAIVD010000025;XM_032909534 XP_032765425 protein-coding 625832085 LOC116897839 zinc finger protein 136-like 4 13454044 13456189 + 30032202 116897839 MODEL JAAIVD010000003;XM_032899255 XP_032755146 protein-coding 625832091 Cd9 CD9 molecule ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast carcinoma (ortholog); cervix carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 6 22411190 22444271 + 22301074;30032202 116903247 MODEL JAAIVD010000024;XM_032905626 XP_032761517 CD9 antigen protein-coding 625832103 Rcan1 regulator of calcineurin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 52155120 52232081 + 22301074;30032202 116898980 MODEL JAAIVD010000003;XM_032900405;XM_032900406 XP_032756296;XP_032756297 calcipressin-1 protein-coding 625832114 LOC116890542 U1 spliceosomal RNA 1 58371886 58372047 + 116890542 MODEL JAAIVD010000025;XR_004386722 snrna 625832117 Scn2b sodium voltage-gated channel beta subunit 2 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); voltage-gated potassium channel activity involved in ventricular cardiac muscle cell action potential repolarization (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Experimental Seizures (ortholog); Familial Atrial Fibrillation 14 (ortholog); FOUND IN axon initial segment (ortholog); node of Ranvier (ortholog); plasma membrane (ortholog) 8 39651877 39664058 + 22301074;30032202 116906895 MODEL JAAIVD010000027;XM_032909806 XP_032765697 sodium channel subunit beta-2 protein-coding 625832125 LOC116908265 elongin-B-like 8 101588133 101590781 + 30032202 116908265 MODEL JAAIVD010000027;XM_032911515 XP_032767406 protein-coding 625832129 LOC116889620 igE-binding protein-like Y 1012637 1015150 + 22301074 116889620 MODEL JAAIVD010000015;XM_032890542 XP_032746433 protein-coding 625832134 Cnga1 cyclic nucleotide gated channel subunit alpha 1 ENCODES a protein that exhibits cAMP binding (ortholog); cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN membrane depolarization (ortholog); regulation of cytosolic calcium ion concentration (ortholog); spermatogenesis (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH retinitis pigmentosa (ortholog); retinitis pigmentosa 49 (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); membrane (ortholog); photoreceptor outer segment (ortholog) 11 29414558 29430401 - 30032202 116912467 MODEL JAAIVD010000006;XM_032916533 XP_032772424 cGMP-gated cation channel alpha-1 protein-coding 625832146 LOC116893266 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143681821 143682841 - 116893266 MODEL JAAIVD010000001 pseudo 625832147 Rint1 RAD50 interactor 1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 6 153018781 153050450 + 22301074;30032202 116904193 MODEL JAAIVD010000024;XM_032907106 XP_032762997 RAD50-interacting protein 1 protein-coding 625832166 Serpinb10 serpin family B member 10 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 86160303 86177912 - 30032202 116911443 MODEL JAAIVD010000005;XM_032915411 XP_032771302 serpin B10 protein-coding 625832178 LOC116903465 protein-L-isoaspartate O-methyltransferase domain-containing protein 1-like 6 47055407 47057052 - 116903465 MODEL JAAIVD010000024;XM_032906017 XP_032761908 protein-coding 625832183 Dmgdh dimethylglycine dehydrogenase ENCODES a protein that exhibits dimethylglycine dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); INVOLVED IN choline catabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH dimethylglycine dehydrogenase deficiency (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 3 202585920 202659552 - 22301074;30032202 116895686 MODEL JAAIVD010000012;XM_032896885 XP_032752776 dimethylglycine dehydrogenase, mitochondrial protein-coding 625832202 LOC116888364 protein PPP4R3C-like X 48958945 48961330 + 116888364 MODEL JAAIVD010000014 pseudo 625832203 LOC116901396 40S ribosomal protein S18-like 1 121724639 121725138 - 116901396 MODEL JAAIVD010000025 pseudo 625832204 Smim17 small integral membrane protein 17 2 179681947 179726301 - 116892737 MODEL JAAIVD010000001;XM_032894610;XM_032894611 XP_032750501;XP_032750502 protein-coding 625832216 Znf346 zinc finger protein 346 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme binding (ortholog); miRNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 73434501 73464036 + 22301074;30032202 116883430 MODEL JAAIVD010000009;XM_032884566 XP_032740457 protein-coding 625832227 Hmox1 heme oxygenase 1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); enzyme binding (ortholog); heme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to arsenic-containing substance (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme degradation pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 17 4482272 4489184 + 22301074;30032202 116886440 MODEL JAAIVD010000011;XM_032887929;XM_032887930;XM_032887931 XP_032743820;XP_032743821;XP_032743822 protein-coding 625832243 LOC116894097 olfactory receptor 52K1-like 2 103410883 103411836 - 22301074 116894097 MODEL JAAIVD010000001;XM_032895817 XP_032751708 protein-coding 625832246 C17H1orf198 chromosome 17 C1orf198 homolog FOUND IN cytosol (ortholog) 17 44155369 44181179 - 116886382 MODEL JAAIVD010000011;XM_032887849 XP_032743740 uncharacterized protein C1orf198 homolog protein-coding 625832254 Dusp16 dual specificity phosphatase 16 ENCODES a protein that exhibits JUN kinase binding (ortholog); mitogen-activated protein kinase binding (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 14651676 14730358 + 22301074;30032202 116903169 MODEL JAAIVD010000024;XM_032905539 XP_032761430 dual specificity protein phosphatase 16 protein-coding 625832265 LOC116907877 transcriptional activator ptaB-like 8 108987593 109160870 - 116907877 MODEL JAAIVD010000027;XM_032911063;XR_004388851 XP_032766954 protein-coding 625832274 LOC116903287 RNA-binding protein 12B-A-like 1 131424691 131432244 - 116903287 MODEL JAAIVD010000025;XR_004388269 pseudo 625832278 Zar1 zygote arrest 1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); mRNA 3'-UTR binding (ortholog); RNA sequestering activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); mRNA stabilization (ortholog); negative regulation of translation (ortholog); FOUND IN cytoplasm (ortholog) 11 29823757 29828114 + 30032202 116912725 MODEL JAAIVD010000006;XM_032916857 XP_032772748 zygote arrest protein 1 protein-coding 625832286 Mmp10 matrix metallopeptidase 10 INVOLVED IN regulation of cell migration (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); asthma (ortholog); contact dermatitis (ortholog) 8 3740635 3748468 + 22301074;30032202 116907372 MODEL JAAIVD010000027;XM_032910324 XP_032766215 stromelysin-2 protein-coding 625832300 LOC116887819 glyceraldehyde-3-phosphate dehydrogenase-like X 32353684 32420304 - 116887819 MODEL JAAIVD010000014 pseudo 625832301 LOC116891346 heat shock cognate 71 kDa protein-like 2 61290267 61292485 - 116891346 MODEL JAAIVD010000001 pseudo 625832302 LOC116897108 serine hydrolase RBBP9-like 3 162751427 162751986 + 116897108 MODEL JAAIVD010000012 pseudo 625832303 Hmg20a high mobility group 20A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); negative regulation of protein sumoylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog) 8 50327351 50410664 + 30032202 116906764 MODEL JAAIVD010000027;XM_032909607 XP_032765498 high mobility group protein 20A protein-coding 625832317 LOC116893131 ATP-binding cassette sub-family A member 3-like 2 81393936 81484755 - 22301074;30032202 116893131 MODEL JAAIVD010000001;XM_032895062 XP_032750953 protein-coding 625832349 Inka1 inka box actin regulator 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN neural tube development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 99315896 99317584 - 30032202 116907030 MODEL JAAIVD010000027;XM_032909972 XP_032765863 PAK4-inhibitor INKA1 protein-coding 625832355 LOC116900720 BPI fold-containing family A member 5 5 133500347 133506380 + 22301074;30032202 116900720 MODEL JAAIVD010000023;XM_032902427 XP_032758318 protein-coding 625832368 Taldo1 transaldolase 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glyceraldehyde-3-phosphate metabolic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); cataract (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 8080231 8090171 - 22301074;30032202 116890873 MODEL JAAIVD010000001;XM_032891454 XP_032747345 transaldolase protein-coding 625832380 LOC116911559 cysteine and glycine-rich protein 2-like 10 8635157 8635987 + 116911559 MODEL JAAIVD010000005 pseudo 625832381 LOC116904662 U7 small nuclear RNA 6 7746437 7746498 + 116904662 MODEL JAAIVD010000024;XR_004388362 snrna 625832384 Tmed3 transmembrane p24 trafficking protein 3 FOUND IN COPI vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 8 81687612 81695335 + 30032202 116907583 MODEL JAAIVD010000027;XM_032910622 XP_032766513 transmembrane emp24 domain-containing protein 3 protein-coding 625832391 LOC116906988 probable threonine protease PRSS50 8 101439700 101446140 + 22301074;30032202 116906988 MODEL JAAIVD010000027;XM_032909914 XP_032765805 protein-coding 625832399 LOC116898421 heat shock 70 kDa protein 14-like 4 88771185 88778871 - 116898421 MODEL JAAIVD010000003 pseudo 625832400 Hdlbp high density lipoprotein binding protein ASSOCIATED WITH autistic disorder (ortholog); chromosome 2q37 deletion syndrome (ortholog); COVID-19 (ortholog) 4 165340391 165410633 - 30032202 116899663 MODEL JAAIVD010000003;XM_032901675 XP_032757566 vigilin protein-coding 625832432 Prlh prolactin releasing hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); prolactin-releasing peptide receptor binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); eating behavior (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasm (ortholog) 4 162958446 162959818 + 30032202 116898263 MODEL JAAIVD010000003;XM_032899617 XP_032755508 prolactin-releasing peptide protein-coding 625832438 Clgn calmegin ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); protein-containing complex assembly (ortholog); single fertilization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) 17 16819066 16853068 - 22301074;30032202 116886501 MODEL JAAIVD010000011;XM_032888004;XM_032888006;XM_032888007 XP_032743895;XP_032743897;XP_032743898 protein-coding 625832464 Hkdc1 hexokinase domain containing 1 ENCODES a protein that exhibits glucokinase activity (ortholog); INVOLVED IN glucose 6-phosphate metabolic process (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Keratoconus 1 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); photoreceptor inner segment (ortholog) 18 28211986 28253452 - 22301074;30032202 116887298 MODEL JAAIVD010000013;XM_032888879 XP_032744770 hexokinase HKDC1 protein-coding 625832486 LOC116895003 small nucleolar RNA SNORA51 2 156739840 156739972 + 116895003 MODEL JAAIVD010000001;XR_004387191 snorna 625832489 Ubc ubiquitin C ASSOCIATED WITH COVID-19 (ortholog) 16 28520660 28525518 + 30032202 116885951 MODEL JAAIVD010000004;XM_032887270 XP_032743161 polyubiquitin-C protein-coding 625832495 LOC116900938 serine/arginine-rich splicing factor 3-like 5 86191643 86209961 + 116900938 MODEL JAAIVD010000023 pseudo 625832496 Spata6l spermatogenesis associated 6 like 2 28987470 29029236 - 30032202 116891067 MODEL JAAIVD010000001;XM_032891772 XP_032747663 spermatogenesis associated 6-like protein protein-coding 625832513 LOC116900724 60S ribosomal protein L12-like 5 134459483 134459990 - 22301074;30032202 116900724 MODEL JAAIVD010000023;XM_032902431 XP_032758322 protein-coding 625832517 LOC116907404 uncharacterized LOC116907404 8 101483477 101509655 + 116907404 MODEL JAAIVD010000027;XR_004388825 ncrna 625832522 Nfu1 NFU1 iron-sulfur cluster scaffold ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN iron-sulfur cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 93 (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 6 59284281 59305027 - 22301074;30032202 116903542 MODEL JAAIVD010000024;XM_032906156 XP_032762047 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial protein-coding 625832534 LOC116902554 U1 spliceosomal RNA 5 96208856 96209017 - 116902554 MODEL JAAIVD010000023;XR_004388153 snrna 625832537 LOC116892994 heat shock protein HSP 90-alpha-like 2 219029839 219031722 - 116892994 MODEL JAAIVD010000001 pseudo 625832538 LOC116907426 zinc finger protein 136-like 1 157283038 157285975 - 116907426 MODEL JAAIVD010000025 pseudo 625832539 Shank2 SH3 and multiple ankyrin repeat domains 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); SH3 domain binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN apical plasma membrane (ortholog); asymmetric synapse (ortholog); brush border membrane (ortholog) 2 5298441 5687447 - 30032202 116890824 MODEL JAAIVD010000001;XM_032891331;XM_032891332;XM_032891333 XP_032747222;XP_032747223;XP_032747224 SH3 and multiple ankyrin repeat domains protein 2 protein-coding 625832576 Akap3 A-kinase anchoring protein 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH spermatogenic failure 82 (ortholog); FOUND IN acrosomal vesicle (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) 6 21023966 21049437 - 30032202 116904584 MODEL JAAIVD010000024;XM_032907379;XM_032907380 XP_032763270;XP_032763271 A-kinase anchor protein 3 protein-coding 625832589 LOC116903363 adenosylhomocysteinase-like 6 30186952 30189274 - 116903363 MODEL JAAIVD010000024;XR_004388274 pseudo 625832593 LOC116895241 interferon-induced protein 44-like 3 25064216 25111724 - 116895241 MODEL JAAIVD010000012;XM_032896562 XP_032752453 protein-coding 625832602 LOC116890481 small nucleolar RNA SNORA55 1 34967702 34967834 - 116890481 MODEL JAAIVD010000025;XR_004386669 snorna 625832605 Tfap2c transcription factor AP-2 gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH microcephaly (ortholog); Stomach Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 145443363 145451099 - 22301074;30032202 116900753 MODEL JAAIVD010000023;XM_032902462;XM_032902463 XP_032758353;XP_032758354 protein-coding 625832618 LOC116904239 uncharacterized LOC116904239 6 157245773 157249082 + 116904239 MODEL JAAIVD010000024;XR_004388337;XR_004388338 ncrna 625832625 Ntrk1 neurotrophic receptor tyrosine kinase 1 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Alcohol-Related Disorders (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) 3 65766019 65782780 + 22301074;30032202 116896715 MODEL JAAIVD010000012;XM_032898134 XP_032754025 high affinity nerve growth factor receptor protein-coding 625832645 LOC116902700 cationic trypsin-3 6 41838377 41842272 - 22301074;30032202 116902700 MODEL JAAIVD010000024;XM_032905055 XP_032760946 protein-coding 625832654 Fgf14 fibroblast growth factor 14 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chemical synaptic transmission (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); cartilage disease (ortholog); cerebellar ataxia (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 12 430364 1015169 + 22301074;30032202 116913434 MODEL JAAIVD010000007;XM_032917630;XM_032917631;XM_032917632;XM_032917633 XP_032773521;XP_032773522;XP_032773523;XP_032773524 protein-coding 625832672 LOC116904155 protein piccolo-like 6 145292208 145336870 + 30032202 116904155 MODEL JAAIVD010000024;XM_032907053 XP_032762944 protein-coding 625832685 Gpc3 glypican 3 ENCODES a protein that exhibits peptidyl-dipeptidase inhibitor activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification (ortholog); body morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atypical teratoid rhabdoid tumor (ortholog); Coronary Vessel Anomalies (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) X 115450239 115803102 + 22301074;30032202 116889173 MODEL JAAIVD010000014;XM_032890339 XP_032746230 glypican-3 protein-coding 625832698 LOC116911992 PRAME family member 8-like 11 48582902 48585572 - 22301074;30032202 116911992 MODEL JAAIVD010000006;XM_032915897 XP_032771788 protein-coding 625832703 LOC116899944 U2 spliceosomal RNA 4 110022781 110022942 - 116899944 MODEL JAAIVD010000003 pseudo 625832704 LOC116883710 keratin, type II cuticular Hb5 1 261558788 261565421 + 22301074;30032202 116883710 MODEL JAAIVD010000025;XM_032884928;XM_032884935 XP_032740819;XP_032740826 protein-coding 625832717 Vgll2 vestigial like family member 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH epilepsy (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 28868931 28874960 - 22301074;30032202 116887526 MODEL JAAIVD010000013;XM_032889153;XM_032889154;XM_032889155 XP_032745044;XP_032745045;XP_032745046 transcription cofactor vestigial-like protein 2 protein-coding 625832730 Ints8 integrator complex subunit 8 INVOLVED IN protein localization to chromatin (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH CEREBELLAR HYPOPLASIA AND SPASTICITY (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 1 132459931 132506495 + 30032202 116903415 MODEL JAAIVD010000025;XM_032905941 XP_032761832 protein-coding 625832761 LOC116893845 guanylate cyclase 2G-like 2 60922203 60963600 + 22301074;30032202 116893845 MODEL JAAIVD010000001;XM_032895564 XP_032751455 protein-coding 625832785 Iqank1 IQ motif and ankyrin repeat containing 1 1 248337698 248364501 + 22301074;30032202 116889959 MODEL JAAIVD010000025;XM_032890762 XP_032746653 putative IQ motif and ankyrin repeat domain-containing protein LOC642574 homolog protein-coding 625832800 Daxx death domain associated protein ENCODES a protein that exhibits enzyme binding (ortholog); histone binding (ortholog); JUN kinase binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); apoptotic signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); appendiceal neoplasm (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell body (ortholog); cell cortex (ortholog); chromosome, centromeric region (ortholog) 18 6918531 6924249 + 22301074 116887575 MODEL JAAIVD010000013;XM_032889195;XM_032889196;XM_032889197;XM_032889198 XP_032745086;XP_032745087;XP_032745088;XP_032745089 death domain-associated protein 6 protein-coding 625832821 LOC116905608 zinc finger protein 844-like 7 13544919 13545599 - 116905608 MODEL JAAIVD010000026 pseudo 625832822 Ccdc150 coiled-coil domain containing 150 4 128953485 129014570 + 116898505 MODEL JAAIVD010000003;XM_032899737 XP_032755628 coiled-coil domain-containing protein 150 protein-coding 625832842 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41778371 41778442 + 116884216 MODEL JAAIVD010000009 trna 625832843 Crtam cytotoxic and regulatory T cell molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell recognition (ortholog); detection of stimulus (ortholog); FOUND IN immunological synapse (ortholog); plasma membrane (ortholog) 8 35559604 35572582 - 30032202 116906737 MODEL JAAIVD010000027;XM_032909559 XP_032765450 cytotoxic and regulatory T-cell molecule protein-coding 625832852 Lrch3 leucine rich repeats and calponin homology domain containing 3 INVOLVED IN septin cytoskeleton organization (ortholog); FOUND IN cytosol (ortholog) 4 17716450 17819172 + 22301074 116898786 MODEL JAAIVD010000003;XM_032900123;XM_032900124;XM_032900125;XM_032900126 XP_032756014;XP_032756015;XP_032756016;XP_032756017 DISP complex protein LRCH3 protein-coding 625832882 LOC116911434 ribose-phosphate pyrophosphokinase 1-like 10 83952825 83953616 + 116911434 MODEL JAAIVD010000005 pseudo 625832883 Trap1 TNF receptor associated protein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of cellular respiration (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); translational attenuation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); osteoarthritis (ortholog); Stomach Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) 9 17783008 17816525 + 22301074;30032202 116908830 MODEL JAAIVD010000002;XM_032912249 XP_032768140 heat shock protein 75 kDa, mitochondrial protein-coding 625832905 R3hcc1l R3H domain and coiled-coil containing 1 like FOUND IN exon-exon junction complex (ortholog) 2 41619747 41696210 + 116891181 MODEL JAAIVD010000001;XM_032891998 XP_032747889 coiled-coil domain-containing protein R3HCC1L protein-coding 625832916 LOC116911046 uncharacterized LOC116911046 10 61570970 61572351 - 116911046 MODEL JAAIVD010000005;XR_004389307 ncrna 625832920 LOC116898393 UPF0711 protein C18orf21 homolog 4 76337121 76337716 - 116898393 MODEL JAAIVD010000003 pseudo 625832921 Tc2n tandem C2 domains, nuclear FOUND IN nucleus (ortholog) 7 120108626 120161081 - 30032202 116905411 MODEL JAAIVD010000026;XM_032908371 XP_032764262 tandem C2 domains nuclear protein protein-coding 625832935 LOC116895002 small nucleolar RNA SNORA51 2 27869822 27869954 - 116895002 MODEL JAAIVD010000001;XR_004387190 snorna 625832938 LOC116889019 heterogeneous nuclear ribonucleoprotein A3-like X 16907761 16908787 - 116889019 MODEL JAAIVD010000014 pseudo 625832939 Raph1 Ras association (RalGDS/AF-6) and pleckstrin homology domains 1 INVOLVED IN axon extension (ortholog); ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); nuclear body (ortholog) 4 134602830 134676935 - 22301074;30032202 116899438 MODEL JAAIVD010000003;XM_032901195 XP_032757086 ras-associated and pleckstrin homology domains-containing protein 1 protein-coding 625832957 LOC116902481 U6 spliceosomal RNA 5 11972786 11972890 - 116902481 MODEL JAAIVD010000023;XR_004388097 snrna 625832960 L1cam L1 cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN axon development (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); aphasia (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell surface (ortholog) X 128699020 128724589 + 22301074;30032202 116888465 MODEL JAAIVD010000014;XM_032889745 XP_032745636 neural cell adhesion molecule L1 protein-coding 625832993 Lamc2 laminin subunit gamma 2 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN basement membrane (ortholog); cell cortex (ortholog); extracellular space (ortholog) 10 32601822 32663367 - 30032202 116911151 MODEL JAAIVD010000005;XM_032915006 XP_032770897 laminin subunit gamma-2 protein-coding 625833020 LOC116886916 RING-box protein 2-like 1 29150070 29150405 + 116886916 MODEL JAAIVD010000025 pseudo 625833021 Syngap1 synaptic Ras GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dendrite development (ortholog); maintenance of postsynaptic specialization structure (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 5 (ortholog); autosomal recessive intellectual developmental disorder 5 (ortholog); FOUND IN dendritic shaft (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 18 6832918 6862986 - 22301074 116887650 MODEL JAAIVD010000013;XM_032889237;XM_032889238;XM_032889239;XM_032889241;XM_032889242;XM_032889243;XM_032889244;XM_032889245;XM_032889246;XM_032889247;XM_032889248;XM_032889249;XM_032889250;XR_004386226 XP_032745128;XP_032745129;XP_032745130;XP_032745132;XP_032745133;XP_032745134;XP_032745135;XP_032745136;XP_032745137;XP_032745138;XP_032745139;XP_032745140;XP_032745141 ras/Rap GTPase-activating protein SynGAP protein-coding 625833080 Nol9 nucleolar protein 9 ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nucleolus (ortholog) 1 8682162 8700456 - 30032202 116892358 MODEL JAAIVD010000025;XM_032894016;XM_032894024 XP_032749907;XP_032749915 polynucleotide 5'-hydroxyl-kinase NOL9 protein-coding 625833098 LOC116900613 solute carrier organic anion transporter family member 6A1-like 5 104763948 104834476 - 22301074;30032202 116900613 MODEL JAAIVD010000023;XM_032902332 XP_032758223 protein-coding 625833113 Nudt18 nudix hydrolase 18 ENCODES a protein that exhibits 8-hydroxy-dADP phosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); 8-oxo-GDP phosphatase activity (ortholog); INVOLVED IN dADP catabolic process (ortholog); dGDP catabolic process (ortholog); GDP catabolic process (ortholog) 12 53774413 53777204 - 30032202 116913718 MODEL JAAIVD010000007;XM_032918018 XP_032773909 8-oxo-dGDP phosphatase NUDT18 protein-coding 625833120 Actrt2 actin related protein T2 ASSOCIATED WITH Keloid (ortholog) 1 6043937 6045348 + 116886069 MODEL JAAIVD010000025;XM_032887386 XP_032743277 actin-related protein T2 protein-coding 625833125 Slc25a19 solute carrier family 25 member 19 ENCODES a protein that exhibits deoxynucleotide transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN deoxynucleotide transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine pyrophosphate transmembrane transport (ortholog); ASSOCIATED WITH Amish Lethal Microcephaly (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 68477706 68488376 + 30032202 116910592 MODEL JAAIVD010000002;XM_032914516;XM_032914517 XP_032770407;XP_032770408 mitochondrial thiamine pyrophosphate carrier protein-coding 625833141 LOC116884076 small nucleolar RNA SNORA17 14 71350084 71350213 + 116884076 MODEL JAAIVD010000009;XR_004385822 snorna 625833144 LOC116903016 glycerol-3-phosphate dehydrogenase 1-like protein 6 153845358 153848632 + 22301074;30032202 116903016 MODEL JAAIVD010000024;XM_032905328;XM_032905329 XP_032761219;XP_032761220 protein-coding 625833154 LOC116899332 uncharacterized LOC116899332 4 118465707 118470101 + 116899332 MODEL JAAIVD010000003;XR_004387706 ncrna 625833158 Actl7a actin like 7A INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH bladder urothelial carcinoma (ortholog); male infertility (ortholog); spermatogenic failure 86 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 1 94867749 94869222 - 30032202 116888546 MODEL JAAIVD010000025;XM_032889858 XP_032745749 actin-like protein 7A protein-coding 625833163 Psmd1 proteasome 26S subunit, non-ATPase 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) 4 158202948 158276762 + 22301074;30032202 116898566 MODEL JAAIVD010000003;XM_032899772 XP_032755663 26S proteasome non-ATPase regulatory subunit 1 protein-coding 625833191 Cenpk centromere protein K INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); FOUND IN inner kinetochore (ortholog); nucleus (ortholog) 3 193109785 193132464 - 22301074;30032202 116897227 MODEL JAAIVD010000012;XM_032898946 XP_032754837 protein-coding 625833204 Ppp3ca protein phosphatase 3 catalytic subunit alpha ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Arthrogryposis, Cleft Palate, Craniosynostosis, and Impaired Intellectual Development (ortholog); autism spectrum disorder (ortholog); Brain Injuries (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 3 22179424 22452893 - 30032202 116896218 MODEL JAAIVD010000012;XM_032897274 XP_032753165 serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform protein-coding 625833222 LOC116910632 U6 spliceosomal RNA 9 83104331 83104434 + 116910632 MODEL JAAIVD010000002;XR_004389171 snrna 625833225 LOC116894080 olfactory receptor 52E2-like 2 103122820 103123754 + 116894080 MODEL JAAIVD010000001 pseudo 625833226 Ier5l immediate early response 5 like 5 5158869 5161519 + 116901178 MODEL JAAIVD010000023;XM_032902846 XP_032758737 immediate early response gene 5-like protein protein-coding 625833231 LOC116909295 collagen alpha-1(I) chain-like 9 17656228 17657081 - 116909295 MODEL JAAIVD010000002;XM_032912834 XP_032768725 protein-coding 625833235 LOC116903452 low molecular weight phosphotyrosine protein phosphatase-like 6 42463767 42464269 - 22301074 116903452 MODEL JAAIVD010000024;XM_032906005 XP_032761896 protein-coding 625833239 LOC116907865 ATP synthase F(0) complex subunit C1, mitochondrial-like 8 27969511 27969971 + 116907865 MODEL JAAIVD010000027 pseudo 625833240 LOC116899757 U6 spliceosomal RNA 4 120710253 120710356 - 116899757 MODEL JAAIVD010000003;XR_004387772 snrna 625833243 Sipa1 signal-induced proliferation-associated 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to water deprivation (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH chronic myeloid leukemia (ortholog); esophageal atresia (ortholog); melanoma (ortholog); FOUND IN protein-containing complex (ortholog) 2 2030540 2042579 + 22301074;30032202 116890701 MODEL JAAIVD010000001;XM_032891129;XM_032891131 XP_032747020;XP_032747022 signal-induced proliferation-associated protein 1 protein-coding 625833267 LOC116894342 orphan sodium- and chloride-dependent neurotransmitter transporter NTT5-like 2 154257757 154269294 - 22301074;30032202 116894342 MODEL JAAIVD010000001;XM_032896039;XM_032896040 XP_032751930;XP_032751931 sodium-dependent neutral amino acid transporter B(0)AT2-like protein-coding 625833289 LOC116889480 small nucleolar RNA SNORA2/SNORA34 family X 80547252 80547387 - 116889480 MODEL JAAIVD010000014;XR_004386431 snorna 625833292 LOC116895945 serine/arginine-rich splicing factor 10-like 3 135484160 135489486 - 116895945 MODEL JAAIVD010000012 pseudo 625833293 Anapc5 anaphase promoting complex subunit 5 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog); spindle (ortholog) 16 31003350 31036403 + 22301074;30032202 116885235 MODEL JAAIVD010000004;XM_032886473;XM_032886474 XP_032742364;XP_032742365 anaphase-promoting complex subunit 5 protein-coding 625833320 LOC116910427 uncharacterized LOC116910427 9 1004804 1007240 - 116910427 MODEL JAAIVD010000002;XR_004389150 ncrna 625833329 Irf2bp1 interferon regulatory factor 2 binding protein 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); protein polyubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 171615252 171617810 - 30032202 116892557 MODEL JAAIVD010000001;XM_032894336 XP_032750227 interferon regulatory factor 2-binding protein 1 protein-coding 625833334 Cimip7 ciliary microtubule inner protein 7 8 99765556 99775537 + 116907590 MODEL JAAIVD010000027;XM_032910630 XP_032766521 C8H3orf84 chromosome 8 C3orf84 homolog;uncharacterized protein C3orf84 homolog protein-coding 625833341 LOC116915087 uncharacterized LOC116915087 13 63419704 63421035 + 116915087 MODEL JAAIVD010000008;XR_004389795 ncrna 625833345 LOC116911541 ubiquitin-like 10 75997341 75997723 - 30032202 116911541 MODEL JAAIVD010000005;XM_032915529 XP_032771420 protein-coding 625833350 Plaat1 phospholipase A and acyltransferase 1 ENCODES a protein that exhibits N-acyltransferase activity (ortholog); O-acyltransferase activity (ortholog); phospholipase A1 activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); peroxisome organization (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope lumen (ortholog); nucleus (ortholog) 4 14129180 14147323 + 30032202 116898740 MODEL JAAIVD010000003;XM_032900052 XP_032755943 protein-coding 625833358 Cfap53 cilia and flagella associated protein 53 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH dextrocardia (ortholog); genetic disease (ortholog); hypoplastic left heart syndrome (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal A tubule inner sheath (ortholog) 15 57600995 57666412 - 116884303 MODEL JAAIVD010000010;XM_032885413 XP_032741304 cilia- and flagella-associated protein 53 protein-coding 625833370 Rhce Rh blood group CcEe antigens ASSOCIATED WITH congenital hemolytic anemia (ortholog); megacolon (ortholog); Rh-Null Disease, Amorph Type (ortholog); FOUND IN ankyrin-1 complex (ortholog) 1 23346891 23380665 - 22301074;30032202 116894623 MODEL JAAIVD010000025;XM_032896343;XM_032896349 XP_032752234;XP_032752240 blood group Rh(CE) polypeptide protein-coding 625833387 Yif1b Yip1 interacting factor homolog B, membrane trafficking protein INVOLVED IN cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kaya-Barakat-Masson Syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 2 166698221 166708400 - 22301074;30032202 116892356 MODEL JAAIVD010000001;XM_032894010;XM_032894011;XM_032894012 XP_032749901;XP_032749902;XP_032749903 protein YIF1B protein-coding 625833405 LOC116902981 60S ribosomal protein L21-like 6 15853103 15854094 - 116902981 MODEL JAAIVD010000024 pseudo 625833406 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 72019579 72019660 + 116904839 MODEL JAAIVD010000024 trna 625833407 Snrnp25 small nuclear ribonucleoprotein U11/U12 subunit 25 FOUND IN cytosol (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog) 9 3675131 3678437 - 30032202 116908882 MODEL JAAIVD010000002;XM_032912327 XP_032768218 U11/U12 small nuclear ribonucleoprotein 25 kDa protein protein-coding 625833416 LOC116886234 acylcarnitine hydrolase-like 17 24813314 24818916 + 116886234 MODEL JAAIVD010000011 pseudo 625833417 LOC116885541 uncharacterized LOC116885541 16 41758075 41759227 + 116885541 MODEL JAAIVD010000004;XR_004386020;XR_004386021 ncrna 625833424 LOC116883878 prolactin-5A1-like 14 47199106 47206391 + 22301074;30032202 116883878 MODEL JAAIVD010000009;XM_032885144 XP_032741035 protein-coding 625833432 Lpxn leupaxin ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of cell adhesion (ortholog); regulation of cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) 2 12843384 12874573 + 30032202 116890997 MODEL JAAIVD010000001;XM_032891675 XP_032747566 protein-coding 625833445 Gigyf2 GRB10 interacting GYF protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); feeding behavior (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Parkinson's Disease 11 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 4 159456826 159582260 + 22301074;30032202 116899604 MODEL JAAIVD010000003;XM_032901556;XM_032901557;XM_032901558;XM_032901560 XP_032757447;XP_032757448;XP_032757449;XP_032757451 GRB10-interacting GYF protein 2 protein-coding 625833489 Rhof ras homolog family member F, filopodia associated INVOLVED IN actin filament organization (ortholog) 16 30689504 30703790 + 22301074;30032202 116885316 MODEL JAAIVD010000004;XM_032886577 XP_032742468 rho-related GTP-binding protein RhoF protein-coding 625833498 LOC116910619 olfactory receptor 1A1-like 9 92999170 93000108 + 22301074;30032202 116910619 MODEL JAAIVD010000002;XM_032914568 XP_032770459 protein-coding 625833501 Nagk N-acetylglucosamine kinase ENCODES a protein that exhibits muramyl dipeptide kinase activity (ortholog); N-acetylglucosamine kinase activity (ortholog); N-acylmannosamine kinase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); N-acetylglucosamine catabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Neoplasm Metastasis (ortholog); Prostatic Neoplasms (ortholog) 6 62443880 62451496 - 30032202 116903596 MODEL JAAIVD010000024;XM_032906236;XM_032906237 XP_032762127;XP_032762128 N-acetyl-D-glucosamine kinase protein-coding 625833520 Fam220a family with sequence similarity 220 member A 16 9571243 9600721 - 30032202 116885563 MODEL JAAIVD010000004;XM_032886856 XP_032742747 protein FAM220A protein-coding 625833526 Unc80 unc-80 subunit of NALCN channel complex ASSOCIATED WITH autism spectrum disorder (ortholog); brain disease (ortholog); Developmental Disabilities (ortholog); FOUND IN plasma membrane (ortholog); sodium channel complex (ortholog) 4 140170953 140352994 - 30032202 116899470 MODEL JAAIVD010000003;XM_032901292 XP_032757183 protein unc-80 homolog;unc-80 homolog, NALCN channel complex subunit protein-coding 625833595 Tspan5 tetraspanin 5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 3 20245414 20405451 - 22301074;30032202 116896205 MODEL JAAIVD010000012;XM_032897253 XP_032753144 tetraspanin-5 protein-coding 625833607 Ofd1 OFD1 centriole and centriolar satellite protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN axoneme assembly (ortholog); centriole replication (ortholog); cilium assembly (ortholog); ASSOCIATED WITH CAKUT (ortholog); ciliopathy (ortholog); COACH syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) X 30514276 30556212 - 22301074;30032202 116889270 MODEL JAAIVD010000014;XM_032890413 XP_032746304 oral-facial-digital syndrome 1 protein protein-coding 625833635 LOC116904543 acidic proline-rich protein PRP33-like 6 16035086 16038275 - 30032202 116904543 MODEL JAAIVD010000024;XM_032907336 XP_032763227 protein-coding 625833641 LOC116888091 60S ribosomal protein L24-like X 94132879 94133330 + 116888091 MODEL JAAIVD010000014 pseudo 625833642 Acot7 acyl-CoA thioesterase 7 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); fatty acid catabolic process (ortholog); long-chain fatty-acyl-CoA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 1 8471544 8562634 - 30032202 116892305 MODEL JAAIVD010000025;XM_032893927;XM_032893935;XM_032893943 XP_032749818;XP_032749826;XP_032749834 cytosolic acyl coenzyme A thioester hydrolase protein-coding 625833661 Sf3a2 splicing factor 3a subunit 2 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 154080548 154086989 - 22301074;30032202 116904838 MODEL JAAIVD010000025;XM_032907451;XM_032907452 XP_032763342;XP_032763343 protein-coding 625833677 Gng14 G protein subunit gamma 14 17 15224824 15225428 + 22301074;30032202 116886419 MODEL JAAIVD010000011;XM_032887902 XP_032743793 putative guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-14 protein-coding 625833683 LOC116905259 acyl-coenzyme A thioesterase 3 7 98137181 98142580 + 22301074;30032202 116905259 MODEL JAAIVD010000026;XM_032908112;XM_032908113 XP_032764003;XP_032764004 protein-coding 625833692 Klhl23 kelch like family member 23 5 47119369 47130281 + 22301074 116901488 MODEL JAAIVD010000023;XM_032903451 XP_032759342 kelch-like protein 23 protein-coding 625833701 LOC116893312 mas-related G-protein coupled receptor member B4-like 2 152104453 152106541 + 116893312 MODEL JAAIVD010000001 pseudo 625833702 LOC116898012 protein SET-like 4 71862729 71863703 - 22301074;30032202 116898012 MODEL JAAIVD010000003;XM_032899405 XP_032755296 protein-coding 625833707 LOC116895506 GTP-binding nuclear protein Ran-like 3 108767890 108769620 - 116895506 MODEL JAAIVD010000012 pseudo 625833708 LOC116889983 uncharacterized LOC116889983 1 172837359 172839208 - 116889983 MODEL JAAIVD010000025;XR_004386520 ncrna 625833712 Spx spexin hormone ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); type 2 galanin receptor binding (ortholog); type 3 galanin receptor binding (ortholog); INVOLVED IN long-chain fatty acid import into cell (ortholog); negative regulation of appetite (ortholog); negative regulation of heart rate (ortholog); FOUND IN cytoplasm (ortholog); dense core granule (ortholog); extracellular space (ortholog) 6 163370 169370 + 22301074;30032202 116903066 MODEL JAAIVD010000024;XM_032905366 XP_032761257 spexin protein-coding 625833722 Ltc4s leukotriene C4 synthase ENCODES a protein that exhibits glutathione binding (ortholog); identical protein binding (ortholog); leukotriene-C4 synthase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to vitamin A (ortholog); leukotriene biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute promyelocytic leukemia (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 9 32900641 32902690 - 22301074;30032202 116909293 MODEL JAAIVD010000002;XM_032912831;XM_032912832 XP_032768722;XP_032768723 protein-coding 625833734 LOC116889302 melanoma-associated antigen B18-like X 129681891 129684147 - 30032202 116889302 MODEL JAAIVD010000014;XM_032890426 XP_032746317 protein-coding 625833740 Kcng2 potassium voltage-gated channel modifier subfamily G member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transport (ortholog) 15 51870090 51936455 + 22301074;30032202 116884790 MODEL AJ011020;JAAIVD010000010;XM_032886023;XM_032886024 CAB56852;XP_032741914;XP_032741915 Kv6.2 cardiac potassium channel subunit (Kv6.2);potassium voltage-gated channel subfamily G member 2 protein-coding 625833750 Mcm3 minichromosome maintenance complex component 3 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH Meier-Gorlin syndrome (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); MCM complex (ortholog) 4 98172509 98190605 - 22301074;30032202 116899242 MODEL JAAIVD010000003;XM_032900846 XP_032756737 DNA replication licensing factor MCM3 protein-coding 625833771 Srgap2 SLIT-ROBO Rho GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin filament severing (ortholog); dendritic spine development (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); myoclonic-atonic epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 10 4300992 4521966 + 22301074;30032202 116910992 MODEL JAAIVD010000005;XM_032914706;XM_032914707 XP_032770597;XP_032770598 SLIT-ROBO Rho GTPase-activating protein 2 protein-coding 625833804 LOC116912105 zinc finger protein DZIP1-like 11 1112363 1114422 - 30032202 116912105 MODEL JAAIVD010000006;XM_032916003 XP_032771894 protein-coding 625833809 Dnaaf9 dynein axonemal assembly factor 9 5 110444437 110576561 - 116901978 MODEL JAAIVD010000023;XM_032904223 XP_032760114 C5H20orf194 chromosome 5 C20orf194 homolog;uncharacterized protein C20orf194 homolog protein-coding 625833850 LOC116901379 low-density lipoprotein receptor-related protein 1B-like 5 18255250 18548275 - 30032202 116901379 MODEL JAAIVD010000023;XM_032903247 XP_032759138 protein-coding 625833860 LOC116907777 argininosuccinate synthase-like 8 73563417 73565012 - 22301074;30032202 116907777 MODEL JAAIVD010000027;XM_032910920 XP_032766811 protein-coding 625833865 Klf6 KLF transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to hydrogen peroxide (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); Hypotension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 14 18752601 18761618 - 30032202 116883348 MODEL JAAIVD010000009;XM_032884428 XP_032740319 Krueppel-like factor 6;Kruppel like factor 6 protein-coding 625833873 LOC116895814 grancalcin-like 3 71649233 71690381 + 116895814 MODEL JAAIVD010000012 pseudo 625833874 Eef1e1 eukaryotic translation elongation factor 1 epsilon 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); progeria (ortholog); stomach cancer (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 57707576 57718365 - 30032202 116883644 MODEL JAAIVD010000009;XM_032884834 XP_032740725 eukaryotic translation elongation factor 1 epsilon-1 protein-coding 625833882 Ccdc117 coiled-coil domain containing 117 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of DNA repair (ortholog); FOUND IN mitotic spindle (ortholog) 11 74474240 74485291 - 116912110 MODEL JAAIVD010000006;XM_032916011 XP_032771902 coiled-coil domain-containing protein 117 protein-coding 625833891 LOC116886985 60 kDa heat shock protein, mitochondrial-like 18 46871912 46873091 - 116886985 MODEL JAAIVD010000013 pseudo 625833892 LOC116908188 40S ribosomal protein S2-like 8 54830299 54830949 + 22301074 116908188 MODEL JAAIVD010000027;XM_032911476 XP_032767367 protein-coding 625833896 Psmg3 proteasome assembly chaperone 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); FOUND IN protein-containing complex (ortholog) 16 13365581 13368549 + 22301074;30032202 116885687 MODEL JAAIVD010000004;XM_032886994;XM_032886995 XP_032742885;XP_032742886 protein-coding 625833906 Prr36 proline rich 36 16 2340250 2347265 - 116885637 MODEL JAAIVD010000004;XM_032886944;XM_032886945;XM_032886946 XP_032742835;XP_032742836;XP_032742837 proline-rich protein 36 protein-coding 625833923 LOC116889744 neuropeptides B/W receptor type 2-like 22301074;30032202 116889744 MODEL JAAIVD010000076;XM_032890612 XP_032746503 protein-coding 625833924 Abtb3 ankyrin repeat and BTB domain containing 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN exploration behavior (ortholog); protein stabilization (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog) 1 162774546 162891050 - 22301074 116907347 MODEL JAAIVD010000025;XM_032910283;XM_032910290;XM_032910298 XP_032766174;XP_032766181;XP_032766189 Btbd11 BTB domain containing 11;ankyrin repeat and BTB/POZ domain-containing protein BTBD11 protein-coding 625833948 Fam234a family with sequence similarity 234 member A ASSOCIATED WITH basal cell carcinoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog) 9 3473510 3503313 - 116909156 MODEL JAAIVD010000002;XM_032912640 XP_032768531 protein FAM234A protein-coding 625833963 LOC116886669 uncharacterized LOC116886669 17 8041704 8069021 + 116886669 MODEL JAAIVD010000011;XR_004386118 ncrna 625833969 LOC116887982 fibroblast growth factor 13 X 70323200 70329610 + 22301074;30032202 116887982 MODEL JAAIVD010000014;XM_032889418 XP_032745309 protein-coding 625833975 Ghdc GH3 domain containing FOUND IN endoplasmic reticulum (ortholog) 9 60058000 60062133 - 30032202 116910014 MODEL JAAIVD010000002;XM_032913801 XP_032769692 GH3 domain-containing protein protein-coding 625833988 Grm4 glutamate metabotropic receptor 4 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); osteosarcoma (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytoplasmic vesicle (ortholog); dendritic shaft (ortholog) 18 6334291 6422553 + 22301074;30032202 116887146 MODEL JAAIVD010000013;XM_032888694 XP_032744585 metabotropic glutamate receptor 4 protein-coding 625834003 LOC116909256 uncharacterized LOC116909256 9 11402358 11493421 + 22301074 116909256 MODEL JAAIVD010000002;XM_032912778 XP_032768669 uncharacterized protein LOC116909256 protein-coding 625834064 Zbtb8a zinc finger and BTB domain containing 8A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 1 28779308 28797210 + 22301074;30032202 116896162 MODEL JAAIVD010000025;XM_032897170 XP_032753061 zinc finger and BTB domain-containing protein 8A protein-coding 625834072 LOC116888617 E3 ubiquitin-protein ligase RLIM-like X 39976640 40006192 + 22301074;30032202 116888617 MODEL JAAIVD010000014;XM_032889915 XP_032745806 protein-coding 625834078 LOC116887832 E3 ubiquitin-protein ligase RNF168-like X 37135520 37136854 + 30032202 116887832 MODEL JAAIVD010000014;XM_032889345 XP_032745236 protein-coding 625834081 Bod1l1 biorientation of chromosomes in cell division 1 like 1 INVOLVED IN DNA damage response (ortholog); replication fork processing (ortholog); FOUND IN nucleoplasm (ortholog); Set1C/COMPASS complex (ortholog) 11 63652704 63707832 + 116912849 MODEL JAAIVD010000006;XM_032917057;XM_032917058;XM_032917059;XM_032917060;XM_032917061;XM_032917063 XP_032772948;XP_032772949;XP_032772950;XP_032772951;XP_032772952;XP_032772954 biorientation of chromosomes in cell division protein 1-like 1 protein-coding 625834120 Rcor3 REST corepressor 3 ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 70135882 70175855 - 30032202 116910846 MODEL JAAIVD010000005;XM_032914596 XP_032770487 protein-coding 625834135 Denr density regulated re-initiation and release factor INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog) 16 29930378 29951335 - 22301074;30032202 116885441 MODEL JAAIVD010000004;XM_032886724 XP_032742615 density-regulated protein protein-coding 625834147 Adgrl4 adhesion G protein-coupled receptor L4 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hypertrophic cardiomyopathy (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 3 9445032 9549862 - 22301074;30032202 116895217 MODEL JAAIVD010000012;XM_032896548 XP_032752439 protein-coding 625834166 Cacnb2 calcium voltage-gated channel auxiliary subunit beta 2 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); chemical synaptic transmission (ortholog); membrane depolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); autism spectrum disorder (ortholog); Brugada syndrome (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog); photoreceptor ribbon synapse (ortholog); voltage-gated calcium channel complex (ortholog) 14 8757848 9099314 - 22301074;30032202 116883156 MODEL JAAIVD010000009;XM_032884170;XM_032884171;XM_032884172;XM_032884173;XM_032884174;XM_032884175;XM_032884176;XM_032884177;XM_032884178;XM_032884179;XM_032884180 XP_032740061;XP_032740062;XP_032740063;XP_032740064;XP_032740065;XP_032740066;XP_032740067;XP_032740068;XP_032740069;XP_032740070;XP_032740071 voltage-dependent L-type calcium channel subunit beta-2 protein-coding 625834210 LOC116894318 glyceraldehyde-3-phosphate dehydrogenase-like 2 149943218 149944159 - 116894318 MODEL JAAIVD010000001 pseudo 625834211 Adcy1 adenylate cyclase 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 44 (ortholog); genetic disease (ortholog); Hyperkinesis (ortholog); FOUND IN axon hillock (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 11 75972922 76078765 + 22301074;30032202 116912815 MODEL JAAIVD010000006;XM_032916983 XP_032772874 adenylate cyclase type 1 protein-coding 625834234 LOC116891908 ATP synthase subunit d, mitochondrial-like 1 5120018 5120612 + 22301074;30032202 116891908 MODEL JAAIVD010000025;XM_032893333 XP_032749224 protein-coding 625834239 LOC116897314 glyceraldehyde-3-phosphate dehydrogenase-like 3 206966774 206967763 + 116897314 MODEL JAAIVD010000012 pseudo 625834240 Golm2 golgi membrane protein 2 FOUND IN Golgi apparatus (ortholog) 5 99995606 100062030 + 116901875 MODEL JAAIVD010000023;XM_032904081;XM_032904082 XP_032759972;XP_032759973 protein CASC4 protein-coding 625834259 Ccdc12 coiled-coil domain containing 12 PARTICIPATES IN spliceosome pathway 8 101240924 101292400 + 30032202 116907677 MODEL JAAIVD010000027;XM_032910772 XP_032766663 coiled-coil domain-containing protein 12 protein-coding 625834270 Pdcd1 programmed cell death 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN negative regulation of B cell apoptotic process (ortholog); negative regulation of immune response (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocarditis (ortholog); anogenital venereal wart (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 165806356 165819479 - 30032202 116898283 MODEL JAAIVD010000003;XM_032899635 XP_032755526 programmed cell death protein 1 protein-coding 625834279 LOC116904146 uncharacterized LOC116904146 1 152670529 152676989 - 116904146 MODEL JAAIVD010000025;XR_004388332 ncrna 625834284 Kmt5b lysine methyltransferase 5B ENCODES a protein that exhibits chromatin binding (ortholog); histone H4K20 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN DNA repair (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 51 (ortholog); Developmental Disabilities (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 3828666 3845630 - 30032202 116894785 MODEL JAAIVD010000001;XM_032896436 XP_032752327 histone-lysine N-methyltransferase KMT5B protein-coding 625834294 LOC116889184 heat shock protein HSP 90-beta-like X 89059060 89061350 - 116889184 MODEL JAAIVD010000014 pseudo 625834295 Snapc4 small nuclear RNA activating complex polypeptide 4 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MOTOR REGRESSION, PROGRESSIVE SPASTIC PARAPLEGIA, AND OROMOTOR DYSFUNCTION (ortholog); FOUND IN snRNA-activating protein complex (ortholog) 5 10708642 10726080 + 116901273 MODEL JAAIVD010000023;XM_032903040 XP_032758931 snRNA-activating protein complex subunit 4 protein-coding 625834322 Impdh2 inosine monophosphate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); nucleotide binding (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); cellular response to interleukin-4 (ortholog); circadian rhythm (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dystonia (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 8 99890588 99895208 + 22301074;30032202 116907600 MODEL JAAIVD010000027;XM_032910650 XP_032766541 inosine-5'-monophosphate dehydrogenase 2 protein-coding 625834340 Trh thyrotropin releasing hormone ENCODES a protein that exhibits thyrotropin-releasing hormone activity (ortholog); INVOLVED IN adult walking behavior (ortholog); eating behavior (ortholog); histamine metabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amnestic disorder (ortholog); Bradycardia (ortholog); FOUND IN secretory granule (ortholog) 6 54717298 54720135 + 22301074 116902722 MODEL JAAIVD010000024;XM_032905072 XP_032760963 protein-coding 625834347 Tef TEF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 1 251542185 251566469 + 30032202 116914062 MODEL JAAIVD010000025;XM_032918356;XM_032918365 XP_032774247;XP_032774256 thyrotroph embryonic factor protein-coding 625834358 LOC116898385 transformer-2 protein homolog alpha-like 4 72259500 72303300 + 116898385 MODEL JAAIVD010000003 pseudo 625834359 LOC116883168 60S ribosomal protein L27a-like 14 60834332 60834764 + 116883168 MODEL JAAIVD010000009 pseudo 625834360 LOC116897928 olfactory receptor 5K3-like 4 42779404 42780330 - 116897928 MODEL JAAIVD010000003 pseudo 625834361 LOC116895658 uncharacterized LOC116895658 3 185922241 185972735 + 116895658 MODEL JAAIVD010000012;XR_004387297 ncrna 625834366 Gale UDP-galactose-4-epimerase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); UDP-glucose 4-epimerase activity (ortholog); INVOLVED IN galactose catabolic process (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH galactose epimerase deficiency (ortholog); galactosemia (ortholog); genetic disease (ortholog) 1 22261586 22264847 - 22301074;30032202 116894479 MODEL JAAIVD010000025;XM_032896192 XP_032752083 UDP-glucose 4-epimerase protein-coding 625834381 Mapk4 mitogen-activated protein kinase 4 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 57988683 58038315 + 22301074;30032202 116884321 MODEL JAAIVD010000010;XM_032885454 XP_032741345 protein-coding 625834390 LOC116893208 pantothenate kinase 1-like 2 108509510 108518883 - 116893208 MODEL JAAIVD010000001 pseudo 625834391 Papss2 3'-phosphoadenosine 5'-phosphosulfate synthase 2 ENCODES a protein that exhibits adenylylsulfate kinase activity (ortholog); sulfate adenylyltransferase (ATP) activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process (ortholog); blood coagulation (ortholog); bone development (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH brachyolmia (ortholog); genetic disease (ortholog); spondyloepimetaphyseal dysplasia, Pakistani type (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 32628119 32703725 + 22301074;30032202 116891092 MODEL JAAIVD010000001;XM_032891809 XP_032747700 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 2 protein-coding 625834408 LOC116911455 lymphotactin 10 44108169 44111831 - 22301074;30032202 116911455 MODEL JAAIVD010000005;XM_032915425 XP_032771316 protein-coding 625834415 Hoxc8 homeobox C8 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 260088960 260092019 - 22301074;30032202 116890186 MODEL JAAIVD010000025;XM_032890922 XP_032746813 homeobox protein Hox-C8 protein-coding 625834420 Ywhab tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Experimental Seizures (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 153958612 153981427 - 30032202 116902369 MODEL JAAIVD010000023;XM_032904865;XM_032904866 XP_032760756;XP_032760757 14-3-3 protein beta/alpha protein-coding 625834434 Xrn2 5'-3' exoribonuclease 2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); identical protein binding (ortholog); INVOLVED IN hippocampus development (ortholog); neuron differentiation (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; ribosome biogenesis pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); leiomyosarcoma (ortholog); lung cancer (ortholog); FOUND IN aggresome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 126636476 126674419 + 30032202 116902067 MODEL JAAIVD010000023;XM_032904356 XP_032760247 protein-coding 625834451 Ptp4a1 protein tyrosine phosphatase 4A1 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 4 107700100 107706973 - 22301074;30032202 116899262 MODEL JAAIVD010000003;XM_032900878;XM_032900879 XP_032756769;XP_032756770 protein tyrosine phosphatase type IVA 1 protein-coding 625834463 LOC116887279 ELAV-like protein 1 1 221090104 221120234 - 116887279 MODEL JAAIVD010000025 pseudo 625834464 Apba1 amyloid beta precursor protein binding family A member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); establishment of localization in cell (ortholog); gamma-aminobutyric acid secretion (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 23999610 24065051 + 22301074;30032202 116891043 MODEL JAAIVD010000001;XM_032891727;XM_032891728 XP_032747618;XP_032747619 amyloid-beta A4 precursor protein-binding family A member 1 protein-coding 625834483 Cuedc1 CUE domain containing 1 9 82620066 82637870 - 22301074 116909485 MODEL JAAIVD010000002;XM_032913082 XP_032768973 CUE domain-containing protein 1 protein-coding 625834496 Batf3 basic leucine zipper ATF-like transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dendritic cell differentiation (ortholog); myeloid dendritic cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH leprosy (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 10 69189042 69200720 + 22301074;30032202 116911233 MODEL JAAIVD010000005;XM_032915133 XP_032771024 basic leucine zipper transcriptional factor ATF-like 3 protein-coding 625834503 LOC116894414 40S ribosomal protein S20-like 2 158627051 158627412 - 116894414 MODEL JAAIVD010000001 pseudo 625834504 LOC116908773 signal recognition particle 19 kDa protein-like 9 65455163 65455636 + 22301074;30032202 116908773 MODEL JAAIVD010000002;XM_032912146 XP_032768037 protein-coding 625834508 Gsdmd gasdermin D ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); membrane (ortholog) 1 248175688 248180356 + 30032202 116912839 MODEL JAAIVD010000025;XM_032917035 XP_032772926 gasdermin-D protein-coding 625834524 LOC116892029 rho-related GTP-binding protein RhoG-like 2 139936299 139937593 + 22301074;30032202 116892029 MODEL JAAIVD010000001;XM_032893487 XP_032749378 protein-coding 625834529 Uba52 ubiquitin A-52 residue ribosomal protein fusion product 1 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to insecticide (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Brain Injuries (ortholog); colon carcinoma (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 13 12762939 12765169 - 22301074;30032202 116914665 MODEL JAAIVD010000008;XM_032919068;XM_032919069;XM_032919070 XP_032774959;XP_032774960;XP_032774961 ubiquitin-60S ribosomal protein L40 protein-coding 625834544 LOC116883932 cyclin-dependent kinases regulatory subunit 2-like 14 11033443 11033774 - 116883932 MODEL JAAIVD010000009 pseudo 625834545 LOC116900990 Ig kappa chain V-V region L7-like 5 109347224 109347815 - 116900990 MODEL JAAIVD010000023 pseudo 625834546 Rab37 RAB37, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); regulation of eye photoreceptor cell development (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); photoreceptor connecting cilium (ortholog); secretory granule (ortholog) 9 68940215 69008321 - 22301074;30032202 116909548 MODEL JAAIVD010000002;XM_032913165;XM_032913166 XP_032769056;XP_032769057 ras-related protein Rab-37 protein-coding 625834563 LOC116911976 protein transport protein Sec61 subunit gamma-like 11 39036912 39037172 - 116911976 MODEL JAAIVD010000006 pseudo 625834564 Cpa4 carboxypeptidase A4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN hormone catabolic process (ortholog); peptide catabolic process (ortholog); FOUND IN extracellular space (ortholog) 6 108970298 108992933 - 22301074;30032202 116902910 MODEL JAAIVD010000024;XM_032905237 XP_032761128 protein-coding 625834577 LOC116894052 olfactory receptor 51F2-like 2 102717090 102718034 + 22301074 116894052 MODEL JAAIVD010000001;XM_032895773 XP_032751664 protein-coding 625834580 LOC116899892 small nucleolar RNA SNORA17 4 119024703 119024821 - 116899892 MODEL JAAIVD010000003 pseudo 625834581 Ppfia4 PPFI scaffold protein A4 ASSOCIATED WITH atrial fibrillation (ortholog); gastrointestinal stromal tumor (ortholog) 10 1346447 1392589 + 22301074;30032202 116911097 MODEL JAAIVD010000005;XM_032914928 XP_032770819 PTPRF interacting protein alpha 4;liprin-alpha-4 protein-coding 625834614 Rhobtb3 Rho related BTB domain containing 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); small GTPase binding (ortholog); INVOLVED IN male gonad development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 3 221272863 221317086 + 22301074;30032202 116897362 MODEL JAAIVD010000012;XM_032899122 XP_032755013 rho-related BTB domain-containing protein 3 protein-coding 625834626 Sox18 SRY-box transcription factor 18 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); basal cell carcinoma (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 5 158768529 158770769 - 30032202 116900802 MODEL JAAIVD010000023;XM_032902518 XP_032758409 transcription factor SOX-18 protein-coding 625834632 Mindy4b MINDY family member 4B 4 100246785 100269323 + 30032202 116898110 MODEL JAAIVD010000003;XM_032899495 XP_032755386 inactive ubiquitin carboxyl-terminal hydrolase MINDY-4B protein-coding 625834644 Ppp2r2b protein phosphatase 2 regulatory subunit Bbeta ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial fission (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 15 2189174 2292650 - 22301074;30032202 116884783 MODEL JAAIVD010000010;XM_032886016 XP_032741907 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B beta isoform protein-coding 625834655 Kat6a lysine acetyltransferase 6A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); cellular senescence (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Arboleda-Tham syndrome (ortholog); FOUND IN cytosol (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nuclear speck (ortholog) 13 63485473 63563246 - 22301074;30032202 116914894 MODEL JAAIVD010000008;XM_032919337 XP_032775228 histone acetyltransferase KAT6A protein-coding 625834677 LOC116888728 ral guanine nucleotide dissociation stimulator-like X 84817802 84818365 - 116888728 MODEL JAAIVD010000014;XM_032890018 XP_032745909 protein-coding 625834682 LOC116895198 small proline-rich protein 2B 3 739387 739629 + 22301074 116895198 MODEL JAAIVD010000012;XM_032896539 XP_032752430 protein-coding 625834685 LOC116894665 trace amine-associated receptor 3 2 210010907 210011935 + 22301074;30032202 116894665 MODEL JAAIVD010000001;XM_032896368 XP_032752259 protein-coding 625834688 LOC116911547 GTP-binding nuclear protein Ran-like 10 3901920 3903326 - 116911547 MODEL JAAIVD010000005 pseudo 625834689 LOC116911653 G1/S-specific cyclin-D2-like 10 25543058 25544684 + 30032202 116911653 MODEL JAAIVD010000005;XM_032915609 XP_032771500 protein-coding 625834694 Muc19 mucin 19, oligomeric ENCODES a protein that exhibits hydroxyapatite binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); Sjogren's syndrome (ortholog) 1 264881066 264907040 + 22301074;30032202 116890335 MODEL JAAIVD010000025;XM_032891005 XP_032746896 mucin-19 protein-coding 625834725 Prag1 PEAK1 related, kinase-activating pseudokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of neuron projection development (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) 13 50929912 50980123 - 22301074;30032202 116914472 MODEL JAAIVD010000008;XM_032918771 XP_032774662 inactive tyrosine-protein kinase PRAG1 protein-coding 625834734 Tchh trichohyalin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intermediate filament organization (ortholog); ASSOCIATED WITH Uncombable Hair Syndrome (ortholog); Uncombable Hair Syndrome 3 (ortholog) 3 121227166 121234127 - 22301074;30032202 116895547 MODEL JAAIVD010000012;XM_032896788 XP_032752679 protein-coding 625834740 LOC116914059 ran guanine nucleotide release factor-like 12 67953590 67954148 + 116914059 MODEL JAAIVD010000007 pseudo 625834741 LOC116901816 heterogeneous nuclear ribonucleoprotein A3-like 5 2825560 2827058 + 116901816 MODEL JAAIVD010000023 pseudo 625834742 Tesk2 testis associated actin remodelling kinase 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); focal adhesion assembly (ortholog); protein phosphorylation (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 40377920 40440490 + 22301074;30032202 116898478 MODEL JAAIVD010000025;XM_032899728 XP_032755619 dual specificity testis-specific protein kinase 2 protein-coding 625834756 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889669 MODEL JAAIVD010000045 trna 625834757 Usp43 ubiquitin specific peptidase 43 ASSOCIATED WITH congenital heart disease (ortholog) 9 47462902 47524080 - 22301074 116908907 MODEL JAAIVD010000002;XM_032912362 XP_032768253 ubiquitin carboxyl-terminal hydrolase 43 protein-coding 625834776 LOC116899236 protection of telomeres protein 1-like 4 93148397 93215293 - 22301074;30032202 116899236 MODEL JAAIVD010000003;XM_032900838 XP_032756729 protein-coding 625834797 LOC116900409 olfactory receptor 140-like 5 70229970 70230908 + 22301074 116900409 MODEL JAAIVD010000023;XM_032902154 XP_032758045 protein-coding 625834800 LOC116902729 vomeronasal type-1 receptor 90 6 56676183 56677477 + 22301074;30032202 116902729 MODEL JAAIVD010000024;XM_032905079 XP_032760970 protein-coding 625834805 LOC116889481 small nucleolar RNA SNORA21 X 52125774 52125877 + 116889481 MODEL JAAIVD010000014;XR_004386432 snorna 625834808 LOC116893296 glyceraldehyde-3-phosphate dehydrogenase-like 2 149418761 149419857 + 116893296 MODEL JAAIVD010000001 pseudo 625834809 Sncg synuclein gamma ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggressive behavior (ortholog); cellular response to hydrostatic pressure (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); centrosome (ortholog) 13 10142247 10146667 - 30032202 116914404 MODEL JAAIVD010000008;XM_032918642 XP_032774533 gamma-synuclein protein-coding 625834818 LOC116906656 high mobility group protein B1-like 1 156539770 156540718 + 22301074;30032202 116906656 MODEL JAAIVD010000025;XM_032909445 XP_032765336 protein-coding 625834823 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 845072 845143 - 116910820 MODEL JAAIVD010000002 trna 625834824 Cenps centromere protein S ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); interstrand cross-link repair (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) 1 11637065 11646681 + 22301074;30032202 116892678 MODEL JAAIVD010000025;XM_032894520;XM_032894529 XP_032750411;XP_032750420 protein-coding 625834837 LOC116898309 60S acidic ribosomal protein P0-like 4 32915624 32916568 - 22301074;30032202 116898309 MODEL JAAIVD010000003;XM_032899651 XP_032755542 protein-coding 625834840 LOC116893723 olfactory receptor 1S1-like 2 13733064 13734053 + 22301074 116893723 MODEL JAAIVD010000001;XM_032895437 XP_032751328 protein-coding 625834843 LOC116897806 proteasome activator complex subunit 3-like 4 6940610 6941370 - 116897806 MODEL JAAIVD010000003 pseudo 625834844 LOC116907014 40S ribosomal protein S2-like 8 53103587 53104444 + 116907014 MODEL JAAIVD010000027 pseudo 625834845 Clec6a C-type lectin domain containing 6A ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); D-mannose binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); defense response to fungus (ortholog); detection of yeast (ortholog); FOUND IN plasma membrane (ortholog) 6 23997285 24012290 + 30032202 116903303 MODEL JAAIVD010000024;XM_032905727;XM_032905728;XM_032905729 XP_032761618;XP_032761619;XP_032761620 C-type lectin domain family 6 member A protein-coding 625834855 LOC116883506 prolactin-8A5 14 46304215 46310414 + 22301074;30032202 116883506 MODEL JAAIVD010000009;XM_032884675;XM_032884676;XM_032884677 XP_032740566;XP_032740567;XP_032740568 protein-coding 625834875 Cog6 component of oligomeric golgi complex 6 INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIl (ortholog); genetic disease (ortholog); FOUND IN Golgi transport complex (ortholog) 3 101412945 101448974 + 22301074;30032202 116896883 MODEL JAAIVD010000012;XM_032898428 XP_032754319 conserved oligomeric Golgi complex subunit 6 protein-coding 625834898 Knop1 lysine rich nucleolar protein 1 2 82788378 82804243 + 116891601 MODEL JAAIVD010000001;XM_032892793;XM_032892794;XM_032892795 XP_032748684;XP_032748685;XP_032748686 lysine-rich nucleolar protein 1 protein-coding 625834911 Grhl3 grainyhead like transcription factor 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); cochlea morphogenesis (ortholog); ectoderm development (ortholog); ASSOCIATED WITH cleft palate (ortholog); Fetal Death (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cilium (ortholog); cytosol (ortholog) 1 22649880 22682436 + 30032202 116886692 MODEL JAAIVD010000025;XM_032888192 XP_032744083 grainyhead-like protein 3 homolog protein-coding 625834930 LOC116912553 60S ribosomal protein L17-like 11 93104168 93104721 - 116912553 MODEL JAAIVD010000006 pseudo 625834931 LOC116887110 keratin-associated protein 12-1-like 18 1043536 1043928 + 22301074;30032202 116887110 MODEL JAAIVD010000013;XM_032888647;XM_032888648;XM_032888649;XM_032888650 XP_032744538;XP_032744539;XP_032744540;XP_032744541 protein-coding 625834943 LOC116893634 solute carrier family 22 member 19-like 2 9391883 9447967 + 22301074;30032202 116893634 MODEL JAAIVD010000001;XM_032895346;XM_032895347 XP_032751237;XP_032751238 protein-coding 625834961 LOC116902592 small nucleolar RNA SNORA17 5 68761102 68761222 + 116902592 MODEL JAAIVD010000023 pseudo 625834962 Dapk2 death associated protein kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN anoikis (ortholog); intracellular signal transduction (ortholog); neutrophil migration (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); colorectal cancer (ortholog); Hepatomegaly (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 8 60503259 60614319 + 22301074;30032202 116906831 MODEL JAAIVD010000027;XM_032909715;XM_032909716 XP_032765606;XP_032765607 death-associated protein kinase 2 protein-coding 625834980 Sprr4 small proline rich protein 4 3 1568980 1569223 + 116895264 MODEL JAAIVD010000012;XM_032896581 XP_032752472 small proline-rich protein 4 protein-coding 625834984 LOC116896250 zinc finger protein 728-like 3 28351955 28369899 + 116896250 MODEL JAAIVD010000012 pseudo 625834985 LOC116899271 uncharacterized LOC116899271 4 110365330 110367402 + 116899271 MODEL JAAIVD010000003;XM_032900893 XP_032756784 uncharacterized protein LOC116899271 protein-coding 625834990 LOC116907057 heat shock cognate 71 kDa protein-like 8 1765586 1767475 + 116907057 MODEL JAAIVD010000027 pseudo 625834991 LOC116913467 small nuclear ribonucleoprotein-associated protein N-like 12 27875418 27876247 - 22301074;30032202 116913467 MODEL JAAIVD010000007;XM_032917671 XP_032773562 protein-coding 625834995 Ffar4 free fatty acid receptor 4 ENCODES a protein that exhibits arrestin family protein binding (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); fat cell differentiation (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); endocytic vesicle (ortholog) 2 35645464 35664179 - 22301074 116891123 MODEL JAAIVD010000001;XM_032891845 XP_032747736 protein-coding 625835002 Tspear thrombospondin type laminin G domain and EAR repeats INVOLVED IN hair cycle process (ortholog); Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 98 (ortholog); ectodermal dysplasia 14 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); stereocilium (ortholog) 18 1027781 1191197 + 30032202 116887093 MODEL JAAIVD010000013;XM_032888604 XP_032744495 thrombospondin-type laminin G domain and EAR repeat-containing protein protein-coding 625835017 Dydc1 DPY30 domain containing 1 FOUND IN radial spoke (ortholog) 13 19592428 19606606 + 30032202 116915053 MODEL JAAIVD010000008;XM_032919469 XP_032775360 DPY30 domain-containing protein 1 protein-coding 625835026 LOC116896575 uncharacterized LOC116896575 3 62219122 62231790 - 116896575 MODEL JAAIVD010000012;XR_004387345 ncrna 625835031 LOC116888377 DNA-(apurinic or apyrimidinic site) lyase 2-like X 20021998 20036970 + 22301074;30032202 116888377 MODEL JAAIVD010000014;XM_032889655 XP_032745546 protein-coding 625835041 Rptor regulatory associated protein of MTOR complex 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme-substrate adaptor activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH developmental coordination disorder (ortholog); lung metastasis (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 64118897 64412297 - 22301074;30032202 116910238 MODEL JAAIVD010000002;XM_032914128 XP_032770019 regulatory-associated protein of mTOR protein-coding 625835079 LOC116883788 LIM domain kinase 2-like 1 206586899 206587789 + 116883788 MODEL JAAIVD010000025 pseudo 625835080 LOC116904417 myosin light polypeptide 6-like 6 105253938 105255614 - 116904417 MODEL JAAIVD010000024 pseudo 625835081 LOC116909502 40S ribosomal protein S3a-like 9 7849113 7850085 + 22301074;30032202 116909502 MODEL JAAIVD010000002;XM_032913107 XP_032768998 protein-coding 625835087 Alkbh8 alkB homolog 8, tRNA methyltransferase ENCODES a protein that exhibits iron ion binding (ortholog); tRNA (5-carboxymethyluridine(34)-5-O)-methyltransferase activity (ortholog); tRNA (uridine) methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); tRNA methylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 71 (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 228925 327548 - 22301074;30032202 116905723 MODEL JAAIVD010000026;XM_032908692;XM_032908693 XP_032764583;XP_032764584 alkylated DNA repair protein alkB homolog 8 protein-coding 625835107 Rpl21 ribosomal protein L21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 16 7603575 7604064 + 22301074;30032202 116885812 MODEL JAAIVD010000004;XM_032887152 XP_032743043 60S ribosomal protein L21 protein-coding 625835111 LOC116900756 uncharacterized LOC116900756 1 76112616 76442747 + 116900756 MODEL JAAIVD010000025;XR_004387949 ncrna 625835116 Slamf7 SLAM family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of natural killer cell activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 10 50815601 50829339 - 30032202 116911621 MODEL JAAIVD010000005;XM_032915588;XM_032915589 XP_032771479;XP_032771480 protein-coding 625835129 LOC116904786 small nucleolar RNA SNORD94 6 74908695 74908831 - 116904786 MODEL JAAIVD010000024;XR_004388450 snorna 625835132 LOC116888082 ribosome biogenesis protein NSA2 homolog X 91152718 91176104 + 116888082 MODEL JAAIVD010000014 pseudo 625835133 LOC116889550 U2 spliceosomal RNA X 109168269 109168374 - 116889550 MODEL JAAIVD010000014 pseudo 625835134 LOC116895356 60S ribosomal protein L23a-like 3 47721343 47724523 - 22301074;30032202 116895356 MODEL JAAIVD010000012;XM_032896654 XP_032752545 protein-coding 625835138 Surf4 surfeit 4 ENCODES a protein that exhibits cargo receptor activity (ortholog); COPII receptor activity (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); early endosome to Golgi transport (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 9721826 9734652 + 22301074;30032202 116901253 MODEL JAAIVD010000023;XM_032903008 XP_032758899 surfeit locus protein 4 protein-coding 625835148 LOC116889920 olfactory receptor 6C68-like 1 160692014 160692965 - 22301074;30032202 116889920 MODEL JAAIVD010000025;XM_032890737 XP_032746628 protein-coding 625835151 LOC116889592 RNA-binding motif protein, Y chromosome, family 1 member B-like Y 1835960 1846362 + 22301074;30032202 116889592 MODEL JAAIVD010000015;XM_032890528 XP_032746419 protein-coding 625835164 Bend5 BEN domain containing 5 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog) 1 44099136 44145140 + 22301074;30032202 116898894 MODEL JAAIVD010000025;XM_032900295;XM_032900303;XM_032900312;XM_032900320 XP_032756186;XP_032756194;XP_032756203;XP_032756211 BEN domain-containing protein 5 protein-coding 625835186 LOC116895480 arylacetamide deacetylase-like 2 3 95097479 95113631 - 22301074 116895480 MODEL JAAIVD010000012;XM_032896739 XP_032752630 protein-coding 625835193 LOC116891578 uncharacterized LOC116891578 2 80952660 80954946 + 116891578 MODEL JAAIVD010000001;XR_004386847 ncrna 625835197 Trpa1 transient receptor potential cation channel subfamily A member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); asthma (ortholog); Bronchial Hyperreactivity (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); plasma membrane (ortholog) 1 149359312 149407510 - 22301074 116889785 MODEL JAAIVD010000025;XM_032890638;XM_032890645 XP_032746529;XP_032746536 protein-coding 625835228 Ndufs8 NADH:ubiquinone oxidoreductase core subunit S8 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 3737423 3741358 + 22301074;30032202 116890800 MODEL JAAIVD010000001;XM_032891280;XM_032891281;XM_032891282 XP_032747171;XP_032747172;XP_032747173 NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial protein-coding 625835247 LOC116886496 uncharacterized LOC116886496 17 39320664 39329667 + 116886496 MODEL JAAIVD010000011;XM_032888000;XM_032888001 XP_032743891;XP_032743892 uncharacterized protein LOC116886496 protein-coding 625835260 LOC116890537 small nucleolar RNA SNORA17 1 237834916 237835047 + 116890537 MODEL JAAIVD010000025;XR_004386718 snorna 625835263 Cmtr2 cap methyltransferase 2 ENCODES a protein that exhibits methyltransferase cap2 activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); lung adenocarcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 29921737 29928644 + 30032202 116886353 MODEL JAAIVD010000011;XM_032887806 XP_032743697 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 2 protein-coding 625835269 LOC116897617 small nucleolar RNA SNORA17 3 161211525 161211656 + 116897617 MODEL JAAIVD010000012;XR_004387599 snorna 625835272 LOC116884811 glyceraldehyde-3-phosphate dehydrogenase-like 15 64550503 64551504 + 116884811 MODEL JAAIVD010000010 pseudo 625835273 Cibar1 CBY1 interacting BAR domain containing 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); inner mitochondrial membrane organization (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH ciliopathy (ortholog); polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 1 131402031 131421047 + 22301074;30032202 116903297 MODEL JAAIVD010000025;XM_032905724;XM_032905732 XP_032761615;XP_032761623 protein FAM92A protein-coding 625835290 LOC116891427 60S ribosomal protein L10-like 2 9785470 9861855 - 116891427 MODEL JAAIVD010000001 pseudo 625835291 Asic4 acid sensing ion channel subunit family member 4 ENCODES a protein that exhibits pH-gated sodium channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog) 4 148802920 148824567 + 22301074;30032202 116899535 MODEL JAAIVD010000003;XM_032901411 XP_032757302 acid-sensing ion channel 4 protein-coding 625835305 LOC116903041 vomeronasal type-1 receptor 100-like 6 159439600 159440517 + 22301074;30032202 116903041 MODEL JAAIVD010000024;XM_032905343 XP_032761234 protein-coding 625835308 Rcsd1 RCSD domain containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 10 44754886 44814927 - 30032202 116911548 MODEL JAAIVD010000005;XM_032915538 XP_032771429 capZ-interacting protein protein-coding 625835319 LOC116886589 putative RNA-binding protein Luc7-like 1 17 3049177 3050076 - 116886589 MODEL JAAIVD010000011 pseudo 625835320 LOC116894983 small nucleolar RNA SNORA9 2 175311265 175311393 + 116894983 MODEL JAAIVD010000001;XR_004387174 snorna 625835323 LOC116907586 olfactory receptor 7E24-like 8 15388752 15389711 + 22301074;30032202 116907586 MODEL JAAIVD010000027;XM_032910626 XP_032766517 protein-coding 625835326 LOC116902741 gastrokine-3-like 6 58930462 58936058 + 30032202 116902741 MODEL JAAIVD010000024;XM_032905089 XP_032760980 protein-coding 625835335 Dnajb11 DnaJ heat shock protein family (Hsp40) member B11 ENCODES a protein that exhibits misfolded protein binding (ortholog); signaling receptor binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN mRNA modification (ortholog); negative regulation of neurogenesis (ortholog); positive regulation of ATP-dependent activity (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 4 7533376 7549582 + 22301074;30032202 116898722 MODEL JAAIVD010000003;XM_032900020 XP_032755911 dnaJ homolog subfamily B member 11 protein-coding 625835349 Nfatc3 nuclear factor of activated T cells 3 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; endothelin signaling pathway; nuclear factor of activated T-cells signaling pathway; ASSOCIATED WITH keratoconus (ortholog); Left Ventricular Hypertrophy (ortholog); Right Ventricular Hypertrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 25804233 25870045 + 30032202 116886704 MODEL JAAIVD010000011;XM_032888212 XP_032744103 nuclear factor of activated T-cells, cytoplasmic 3 protein-coding 625835363 Gdi2 GDP dissociation inhibitor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); negative regulation of protein localization to cilium (ortholog); small GTPase-mediated signal transduction (ortholog); PARTICIPATES IN Rab family mediated signaling pathway; ASSOCIATED WITH Down syndrome (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); synapse (ortholog) 14 17891416 17917430 + 22301074;30032202 116883826 MODEL JAAIVD010000009;XM_032885083 XP_032740974 rab GDP dissociation inhibitor beta protein-coding 625835378 LOC116889497 small nucleolar RNA SNORA48 X 21429373 21429504 - 116889497 MODEL JAAIVD010000014 pseudo 625835379 LOC116907746 olfactory receptor 147-like 8 31656511 31657446 + 22301074;30032202 116907746 MODEL JAAIVD010000027;XM_032910883 XP_032766774 protein-coding 625835383 Sgk1 serum/glucocorticoid regulated kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to insulin stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN glucocorticoid signaling pathway; insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); perinuclear region of cytoplasm (ortholog) 2 208448634 208572960 + 22301074 116892937 MODEL JAAIVD010000001;XM_032894876;XM_032894877;XM_032894878;XM_032894879 XP_032750767;XP_032750768;XP_032750769;XP_032750770 serine/threonine-protein kinase Sgk1 protein-coding 625835410 LOC116894162 olfactory receptor 2D3-like 2 105028761 105029690 + 22301074 116894162 MODEL JAAIVD010000001;XM_032895879 XP_032751770 protein-coding 625835414 LOC116890606 small nucleolar RNA SNORA79 1 171786262 171786405 - 116890606 MODEL JAAIVD010000025;XR_004386757 snorna 625835417 LOC116885584 sulfotransferase 1C2-like 1 185211955 185213343 + 116885584 MODEL JAAIVD010000025 pseudo 625835418 LOC116890371 U6 spliceosomal RNA 1 13252373 13252479 - 116890371 MODEL JAAIVD010000025;XR_004386586 snrna 625835421 LOC116895494 60S ribosomal protein L18a-like 3 104126119 104126674 + 116895494 MODEL JAAIVD010000012 pseudo 625835422 Hnrnpl heterogeneous nuclear ribonucleoprotein L ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); pre-mRNA intronic binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH brain cancer (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 167180433 167193397 - 22301074;30032202 116892373 MODEL JAAIVD010000001;XM_032894033;XM_032894034;XM_032894035 XP_032749924;XP_032749925;XP_032749926 protein-coding 625835445 Npm3 nucleophosmin/nucleoplasmin 3 INVOLVED IN rRNA processing (ortholog); rRNA transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); nucleolus (ortholog) 2 45220794 45222762 - 30032202 116891231 MODEL JAAIVD010000001;XM_032892080 XP_032747971 nucleoplasmin-3 protein-coding 625835455 LOC116911873 U6 spliceosomal RNA 10 46592647 46592753 + 116911873 MODEL JAAIVD010000005;XR_004389387 snrna 625835458 LOC116914530 ribosomal oxygenase 2-like 13 32916519 32917990 - 116914530 MODEL JAAIVD010000008 pseudo 625835459 Grb10 growth factor receptor bound protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); insulin receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN protein-containing complex (ortholog) 11 80872579 80977917 - 30032202 116912889 MODEL JAAIVD010000006;XM_032917144;XM_032917145 XP_032773035;XP_032773036 growth factor receptor-bound protein 10 protein-coding 625835485 LOC116913810 mitochondrial pyruvate carrier 1-like 12 54095150 54095427 - 116913810 MODEL JAAIVD010000007 pseudo 625835486 Kcnmb3 potassium calcium-activated channel subfamily M regulatory beta subunit 3 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 3 122512979 122527781 + 22301074;30032202 116895553 MODEL JAAIVD010000012;XM_032896791 XP_032752682 calcium-activated potassium channel subunit beta-3 protein-coding 625835494 Des desmin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN intermediate filament organization (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN cardiac myofibril (ortholog); cell tip (ortholog); cell-cell junction (ortholog) 4 148712814 148720404 + 22301074;30032202 116899532 MODEL JAAIVD010000003;XM_032901402;XM_032901403 XP_032757293;XP_032757294 protein-coding 625835512 Lrit1 leucine rich repeat, Ig-like and transmembrane domains 1 INVOLVED IN phototransduction (ortholog); response to light stimulus (ortholog); synaptic signaling (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); synapse (ortholog); synaptic cleft (ortholog) 13 15527133 15534818 + 22301074;30032202 116915047 MODEL JAAIVD010000008;XM_032919457 XP_032775348 leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1 protein-coding 625835520 LOC116908826 keratin-associated protein 4-2-like 9 54572449 54573082 - 22301074;30032202 116908826 MODEL JAAIVD010000002;XM_032912246 XP_032768137 protein-coding 625835524 LOC116895623 60S ribosomal protein L9-like 3 172215190 172216213 + 116895623 MODEL JAAIVD010000012 pseudo 625835525 LOC116913345 cysteine and histidine-rich protein 1-like 1 248971465 248984485 - 22301074;30032202 116913345 MODEL JAAIVD010000025;XM_032917501 XP_032773392 protein-coding 625835533 LOC116890124 olfactory receptor 8K3-like 1 242004918 242005859 - 22301074;30032202 116890124 MODEL JAAIVD010000025;XM_032890863 XP_032746754 protein-coding 625835536 Kcnma1 potassium calcium-activated channel subfamily M alpha 1 ENCODES a protein that exhibits actin binding (ortholog); calcium-activated potassium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult walking behavior (ortholog); blood vessel diameter maintenance (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) 12 93034529 93729512 - 22301074;30032202 116913130 MODEL JAAIVD010000007;XM_032917294;XM_032917295;XM_032917296;XM_032917297;XM_032917298;XM_032917300;XM_032917301;XM_032917302;XM_032917303;XM_032917304;XM_032917305;XM_032917306;XM_032917307;XM_032917308;XM_032917309;XM_032917310;XM_032917311;XM_032917312;XM_032917313;XM_032917314;XM_032917316;XM_032917317;XM_032917318;XM_032917319;XM_032917320;XM_032917321;XM_032917322;XM_032917323;XM_032917324;XM_032917325;XM_032917326;XM_032917327;XM_032917328;XM_032917329;XM_032917330;XM_032917332;XM_032917333;XM_032917334;XM_032917335;XM_032917336 XP_032773185;XP_032773186;XP_032773187;XP_032773188;XP_032773189;XP_032773191;XP_032773192;XP_032773193;XP_032773194;XP_032773195;XP_032773196;XP_032773197;XP_032773198;XP_032773199;XP_032773200;XP_032773201;XP_032773202;XP_032773203;XP_032773204;XP_032773205;XP_032773207;XP_032773208;XP_032773209;XP_032773210;XP_032773211;XP_032773212;XP_032773213;XP_032773214;XP_032773215;XP_032773216;XP_032773217;XP_032773218;XP_032773219;XP_032773220;XP_032773221;XP_032773223;XP_032773224;XP_032773225;XP_032773226;XP_032773227 calcium-activated potassium channel subunit alpha-1 protein-coding 625835641 LOC116905081 lanosterol 14-alpha demethylase-like 7 72328823 72331002 - 22301074 116905081 MODEL JAAIVD010000026;XM_032907788 XP_032763679 protein-coding 625835646 Klf9 KLF transcription factor 9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to cortisol stimulus (ortholog); cellular response to endothelin (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH Body Weight (ortholog); diastolic heart failure (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 23203779 23227088 + 30032202 116891038 MODEL JAAIVD010000001;XM_032891720 XP_032747611 Krueppel-like factor 9;Kruppel like factor 9 protein-coding 625835652 Ntaq1 N-terminal glutamine amidase 1 ENCODES a protein that exhibits protein-N-terminal glutamine amidohydrolase activity (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 1 232689625 232741239 + 30032202 116911736 MODEL JAAIVD010000025;XM_032915720;XM_032915728;XM_032915737;XM_032915744;XM_032915751 XP_032771611;XP_032771619;XP_032771628;XP_032771635;XP_032771642 protein N-terminal glutamine amidohydrolase protein-coding 625835677 LOC116890425 U7 small nuclear RNA 1 242789080 242789139 + 116890425 MODEL JAAIVD010000025;XR_004386624 snrna 625835680 Pgm5 phosphoglucomutase 5 ENCODES a protein that exhibits phosphoglucomutase activity (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); costamere (ortholog) 2 24814901 24988742 - 22301074;30032202 116891051 MODEL JAAIVD010000001;XM_032891741 XP_032747632 phosphoglucomutase-like protein 5 protein-coding 625835695 Tpx2 TPX2 microtubule nucleation factor ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon hillock (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 5 132171740 132212675 + 30032202 116902128 MODEL JAAIVD010000023;XM_032904452;XM_032904453;XM_032904454;XM_032904455 XP_032760343;XP_032760344;XP_032760345;XP_032760346 targeting protein for Xklp2 protein-coding 625835722 Galnt13 polypeptide N-acetylgalactosaminyltransferase 13 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); obsolete protein O-linked glycosylation via threonine (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); Zimmermann-Laband Syndrome 3 (ortholog) 5 32046156 32675481 + 30032202 116901418 MODEL JAAIVD010000023;XM_032903304 XP_032759195 protein-coding 625835739 LOC116906689 peroxisomal multifunctional enzyme type 2-like 8 234357 236586 + 116906689 MODEL JAAIVD010000027;XM_032909480 XP_032765371 protein-coding 625835744 Cdsn corneodesmosin ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cell-cell adhesion (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); hypotrichosis 2 (ortholog); FOUND IN cornified envelope (ortholog); desmosome (ortholog); extracellular region (ortholog) 18 8759327 8763527 + 30032202 116887457 MODEL JAAIVD010000013;XM_032889065 XP_032744956 protein-coding 625835749 Znf335 zinc finger protein 335 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog); cerebral cortex neuron differentiation (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN histone methyltransferase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 153047499 153067755 + 30032202 116902340 MODEL JAAIVD010000023;XM_032904818;XM_032904819;XM_032904820;XM_032904821;XM_032904822 XP_032760709;XP_032760710;XP_032760711;XP_032760712;XP_032760713 protein-coding 625835794 Tmc1 transmembrane channel like 1 ENCODES a protein that exhibits calcium channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); calcium ion transmembrane transport (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 36 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 7 (ortholog); FOUND IN external side of plasma membrane (ortholog); stereocilium (ortholog); stereocilium tip (ortholog) 2 20883240 21046161 - 30032202 116891026 MODEL JAAIVD010000001;XM_032891708 XP_032747599 transmembrane channel-like protein 1 protein-coding 625835818 LOC116895116 small nucleolar RNA U3 2 127754421 127754635 - 116895116 MODEL JAAIVD010000001;XR_004387264 snorna 625835821 Amtn amelotin INVOLVED IN odontogenesis of dentin-containing tooth (ortholog); positive regulation of biomineral tissue development (ortholog); positive regulation of enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 3A (ortholog); amelogenesis imperfecta type 3B (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) 11 1898640 1911219 + 22301074;30032202 116912662 MODEL JAAIVD010000006;XM_032916781 XP_032772672 protein-coding 625835834 LOC116893108 neuromedin-U receptor 1-like 2 67703507 67704725 - 116893108 MODEL JAAIVD010000001 pseudo 625835835 LOC116904388 small nuclear ribonucleoprotein-associated protein B-like 6 93340383 93343268 + 116904388 MODEL JAAIVD010000024 pseudo 625835836 LOC116911144 thrombospondin type-1 domain-containing protein 7B-like 10 6610488 6624474 - 116911144 MODEL JAAIVD010000005;XM_032914997 XP_032770888 protein-coding 625835843 LOC116896101 transcription elongation factor A protein-like 3 3 223219902 223255832 - 116896101 MODEL JAAIVD010000012;XR_004387309 pseudo 625835847 Nps neuropeptide S INVOLVED IN positive regulation of action potential (ortholog); positive regulation of circadian sleep/wake cycle, wakefulness (ortholog); positive regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Alcoholic Intoxication (ortholog); anxiety disorder (ortholog); Cocaine-Related Disorders (ortholog) 2 66643442 66648389 - 22301074;30032202 116893107 MODEL JAAIVD010000001;XM_032895046 XP_032750937 protein-coding 625835853 Smap2 small ArfGAP2 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 36004900 36052079 + 22301074;30032202 116897232 MODEL JAAIVD010000025;XM_032898959 XP_032754850 stromal membrane-associated protein 2 protein-coding 625835867 LOC116904489 neuroepithelial cell-transforming gene 1 protein-like 6 150408031 150408709 + 116904489 MODEL JAAIVD010000024 pseudo 625835868 LOC116907802 olfactory receptor 1174-like 8 16266175 16267170 + 22301074;30032202 116907802 MODEL JAAIVD010000027;XM_032910947 XP_032766838 protein-coding 625835871 LOC116883949 actin-related protein 2/3 complex subunit 5-like 14 17721000 17729976 - 116883949 MODEL JAAIVD010000009 pseudo 625835872 Pole DNA polymerase epsilon, catalytic subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH ascending colon cancer (ortholog); astroblastoma (ortholog); breast cancer (ortholog); FOUND IN epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 44023944 44072437 - 22301074;30032202 116885592 MODEL JAAIVD010000004;XM_032886896 XP_032742787 DNA polymerase epsilon catalytic subunit A protein-coding 625835925 Micall2 MICAL like 2 ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Joubert syndrome 1 (ortholog); FOUND IN actin filament bundle (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 16 13453953 13482780 + 22301074 116885633 MODEL JAAIVD010000004;XM_032886937 XP_032742828 MICAL-like protein 2 protein-coding 625835946 LOC116907187 40S ribosomal protein S6-like 8 10963900 10964674 + 22301074;30032202 116907187 MODEL JAAIVD010000027;XM_032910148 XP_032766039 protein-coding 625835950 LOC116909605 olfactory receptor 2T4-like 9 39687405 39688352 + 22301074 116909605 MODEL JAAIVD010000002;XM_032913227 XP_032769118 protein-coding 625835953 Pnpla8 patatin like domain 8, phospholipase A2 ENCODES a protein that exhibits calcium-independent phospholipase A2 activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cardiolipin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Mitochondrial Myopathy with Lactic Acidosis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) 7 57906912 57969205 + 30032202 116905007 MODEL JAAIVD010000026;XM_032907691 XP_032763582 calcium-independent phospholipase A2-gamma;patatin like phospholipase domain containing 8 protein-coding 625835967 LOC116900642 proteasome subunit beta type-3-like 5 111168866 111169574 - 22301074 116900642 MODEL JAAIVD010000023;XM_032902352 XP_032758243 protein-coding 625835971 LOC116910135 60S acidic ribosomal protein P0-like 9 17020537 17021554 + 116910135 MODEL JAAIVD010000002 pseudo 625835972 Usf2 upstream transcription factor 2, c-fos interacting ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); glucose mediated signaling pathway (ortholog); lactation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 165082555 165093652 + 22301074;30032202 116892296 MODEL JAAIVD010000001;XM_032893905 XP_032749796 upstream stimulatory factor 2 protein-coding 625835986 Rbpj recombination signal binding protein for immunoglobulin kappa J region ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve development (ortholog); arterial endothelial cell fate commitment (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 3 (ortholog); aortic valve disease (ortholog); FOUND IN cytoplasm (ortholog); MAML1-RBP-Jkappa- ICN1 complex (ortholog); nucleolus (ortholog) 11 52493689 52556515 - 22301074;30032202 116912084 MODEL JAAIVD010000006;XM_032915963;XM_032915964;XM_032915965;XM_032915966 XP_032771854;XP_032771855;XP_032771856;XP_032771857 recombining binding protein suppressor of hairless protein-coding 625836011 LOC116897068 ubiquitin-conjugating enzyme E2 L3-like 3 154868645 154869541 - 116897068 MODEL JAAIVD010000012;XM_032898692 XP_032754583 protein-coding 625836016 LOC116913916 DNA replication complex GINS protein SLD5-like 12 27756144 27756664 - 116913916 MODEL JAAIVD010000007 pseudo 625836017 LOC116887912 alpha- and gamma-adaptin-binding protein p34-like X 54661025 54662255 - 116887912 MODEL JAAIVD010000014 pseudo 625836018 Lrp3 LDL receptor related protein 3 INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog) 2 163464780 163477677 + 22301074;30032202 116892272 MODEL JAAIVD010000001;XM_032893862 XP_032749753 low-density lipoprotein receptor-related protein 3 protein-coding 625836029 Ctbp2 C-terminal binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); nuclear retinoic acid receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); Neoplastic Cell Transformation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 2 68830118 68859382 + 22301074 116891389 MODEL JAAIVD010000001;XM_032892407 XP_032748298 C-terminal-binding protein 2 protein-coding 625836041 Ccn1 cellular communication network factor 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); INVOLVED IN apoptotic process involved in heart morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Heart Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 3 15225394 15228374 + 22301074 116896180 MODEL JAAIVD010000012;XM_032897219 XP_032753110 CCN family member 1 protein-coding 625836050 LOC116888067 vacuolar ATPase assembly integral membrane protein VMA21-like X 88866595 88868190 - 116888067 MODEL JAAIVD010000014 pseudo 625836051 LOC116887843 uncharacterized LOC116887843 X 40130532 40135850 - 116887843 MODEL JAAIVD010000014 pseudo 625836052 Dapk3 death associated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); FOUND IN actin filament (ortholog); chromosome, centromeric region (ortholog); cilium (ortholog) 1 153697736 153705155 - 22301074;30032202 116904526 MODEL JAAIVD010000025;XM_032907320;XM_032907327 XP_032763211;XP_032763218 death-associated protein kinase 3 protein-coding 625836067 LOC116899920 U1 spliceosomal RNA 4 53069801 53069961 + 116899920 MODEL JAAIVD010000003;XR_004387891 snrna 625836070 LOC116887625 olfactory receptor 12D2-like 18 10346401 10348755 + 22301074 116887625 MODEL JAAIVD010000013;XM_032889227 XP_032745118 protein-coding 625836075 LOC116898390 serine/Arginine-related protein 53-like 4 74438522 74515561 + 116898390 MODEL JAAIVD010000003 pseudo 625836076 LOC116909054 ATP synthase subunit g, mitochondrial-like 9 55608496 55609259 + 116909054 MODEL JAAIVD010000002 pseudo 625836077 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48657160 48657241 - 116910836 MODEL JAAIVD010000002 trna 625836078 Nnat neuronatin INVOLVED IN establishment of localization in cell (ortholog); neuron differentiation (ortholog); positive regulation of insulin secretion (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN cytoplasm (ortholog) 5 136903575 136906038 + 30032202 116902228 MODEL JAAIVD010000023;XM_032904633;XM_032904634;XM_032904635;XM_032904636 XP_032760524;XP_032760525;XP_032760526;XP_032760527 protein-coding 625836095 LOC116897911 uncharacterized LOC116897911 4 36262712 36263916 - 116897911 MODEL JAAIVD010000003;XR_004387629 ncrna 625836099 Ctnna3 catenin alpha 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); regulation of heart rate by cardiac conduction (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 13 (ortholog); asthma (ortholog); congenital heart disease (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); lamellipodium (ortholog) 18 21725648 23220892 - 22301074;30032202 116886938 MODEL JAAIVD010000013;XM_032888434 XP_032744325 catenin alpha-3 protein-coding 625836121 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 44858752 44858823 - 116914206 MODEL JAAIVD010000007 trna 625836122 LOC116913731 olfactory receptor 11H4-like 12 72618941 72619915 + 22301074 116913731 MODEL JAAIVD010000007;XM_032918036 XP_032773927 protein-coding 625836125 LOC116909294 olfactory receptor 1361-like 9 38403356 38404297 + 22301074;30032202 116909294 MODEL JAAIVD010000002;XM_032912833 XP_032768724 protein-coding 625836128 Meis2 Meis homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye development (ortholog); negative regulation of myeloid cell differentiation (ortholog); pancreas development (ortholog); ASSOCIATED WITH brain infarction (ortholog); Calcification of Aortic Valve (ortholog); cleft palate (ortholog); FOUND IN nucleus (ortholog) 5 94073904 94277146 - 30032202 116901766 MODEL JAAIVD010000023;XM_032903903;XM_032903904;XM_032903905;XM_032903906;XM_032903907;XM_032903908 XP_032759794;XP_032759795;XP_032759796;XP_032759797;XP_032759798;XP_032759799 homeobox protein Meis2 protein-coding 625836159 Begain brain enriched guanylate kinase associated INVOLVED IN evoked excitatory postsynaptic potential (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 7 126715140 126750174 - 30032202 116905461 MODEL JAAIVD010000026;XM_032908418;XM_032908419;XM_032908420;XM_032908422 XP_032764309;XP_032764310;XP_032764311;XP_032764313 brain-enriched guanylate kinase-associated protein protein-coding 625836180 LOC116900539 olfactory receptor 4F15-like 5 89623635 89624573 + 22301074 116900539 MODEL JAAIVD010000023;XM_032902266 XP_032758157 protein-coding 625836183 Wfdc2 WAP four-disulfide core domain 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Bronchiectasis and Nasal Polyposis (ortholog); Experimental Liver Cirrhosis (ortholog) 5 153403246 153409212 - 22301074;30032202 116902356 MODEL JAAIVD010000023;XM_032904844 XP_032760735 WAP four-disulfide core domain protein 2 protein-coding 625836192 LOC116904545 uncharacterized protein DDB_G0290685-like 6 16737436 16779561 - 116904545 MODEL JAAIVD010000024;XM_032907339 XP_032763230 protein-coding 625836202 Tafazzin tafazzin, phospholipid-lysophospholipid transacylase ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); cardiolipin metabolic process (ortholog); cristae formation (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Barth syndrome (ortholog); cardiomyopathy (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) X 128285410 128293938 + 30032202 116888439 MODEL JAAIVD010000014;XM_032889713;XM_032889714;XM_032889715 XP_032745604;XP_032745605;XP_032745606 Taz protein-coding 625836223 Cldn4 claudin 4 INVOLVED IN circadian rhythm (ortholog); establishment of skin barrier (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); invasive ductal carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); basal plasma membrane (ortholog) 16 19099054 19101031 + 22301074;30032202 116885740 MODEL JAAIVD010000004;XM_032887047 XP_032742938 claudin-4 protein-coding 625836228 LOC116906495 U1 spliceosomal RNA 7 107002625 107002780 - 116906495 MODEL JAAIVD010000026;XR_004388736 snrna 625836231 Kcnq2 potassium voltage-gated channel subfamily Q member 2 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); apoptosome assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); node of Ranvier (ortholog) 5 158187800 158240745 - 22301074;30032202 116902429 MODEL JAAIVD010000023;XM_032904960;XM_032904961;XM_032904962;XM_032904963;XR_004388071 XP_032760851;XP_032760852;XP_032760853;XP_032760854 potassium voltage-gated channel subfamily KQT member 2 protein-coding 625836262 LOC116910018 olfactory receptor 2A12-like 1 38024755 38025696 + 22301074 116910018 MODEL JAAIVD010000025;XM_032914162 XP_032770053 protein-coding 625836265 Ndufa10 NADH:ubiquinone oxidoreductase subunit A10 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 4 164404750 164440467 - 22301074;30032202 116899645 MODEL JAAIVD010000003;XM_032901654 XP_032757545 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 10, mitochondrial protein-coding 625836279 LOC116913980 60S ribosomal protein L35a-like 1 251219471 251219843 + 22301074;30032202 116913980 MODEL JAAIVD010000025;XM_032918258 XP_032774149 protein-coding 625836284 LOC116894419 keratin-associated protein 6-3-like 2 158754721 158754945 - 116894419 MODEL JAAIVD010000001;XM_032896124 XP_032752015 protein-coding 625836287 LOC116911296 ankyrin repeat domain-containing protein 49-like 10 12399479 12400478 - 116911296 MODEL JAAIVD010000005 pseudo 625836288 LOC116898319 caprin-1-like 4 40514861 40551840 + 116898319 MODEL JAAIVD010000003 pseudo 625836289 Dpp9 dipeptidyl peptidase 9 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CARD8 inflammasome complex assembly (ortholog); negative regulation of programmed cell death (ortholog); NLRP1 inflammasome complex assembly (ortholog); ASSOCIATED WITH idiopathic pulmonary fibrosis (ortholog); Immunodeficiency 111 (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); microtubule (ortholog) 4 87571389 87605686 - 22301074;30032202 116899172 MODEL JAAIVD010000003;XM_032900741;XM_032900742;XM_032900743 XP_032756632;XP_032756633;XP_032756634 protein-coding 625836323 Gnas GNAS complex locus ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase regulator activity (ortholog); alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; corticotropin-releasing hormone signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH acromegaly (ortholog); ACTH-independent macronodular adrenal hyperplasia (ortholog); ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); FOUND IN COPI-coated Golgi to ER transport vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 143634838 143686469 - 22301074;30032202 116902268 MODEL JAAIVD010000023;XM_032904688;XM_032904689;XM_032904690;XM_032904691;XM_032904692;XM_032904693;XM_032904695;XM_032904696;XM_032904697 XP_032760579;XP_032760580;XP_032760581;XP_032760582;XP_032760583;XP_032760584;XP_032760586;XP_032760587;XP_032760588 guanine nucleotide-binding protein G(s) subunit alpha;guanine nucleotide-binding protein G(s) subunit alpha isoforms XLas protein-coding 625836358 LOC116888984 60S ribosomal protein L19-like X 12263777 12264931 + 116888984 MODEL JAAIVD010000014 pseudo 625836359 Ufm1 ubiquitin fold modifier 1 INVOLVED IN brain development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of protein import into nucleus (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 14 (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 3 100546930 100555226 + 30032202 116896876 MODEL JAAIVD010000012;XM_032898422 XP_032754313 ubiquitin-fold modifier 1 protein-coding 625836369 Tram2 translocation associated membrane protein 2 INVOLVED IN collagen biosynthetic process (ortholog); protein insertion into ER membrane (ortholog) 4 98374997 98448263 - 22301074;30032202 116898106 MODEL JAAIVD010000003;XM_032899491 XP_032755382 translocating chain-associated membrane protein 2 protein-coding 625836384 LOC116910300 60S ribosomal protein L30-like 9 48504012 48506649 + 116910300 MODEL JAAIVD010000002 pseudo 625836385 LOC116912922 60S ribosomal protein L15-like 1 175485753 175488538 + 116912922 MODEL JAAIVD010000025 pseudo 625836386 LOC116898595 60S ribosomal protein L24-like 4 178490978 178492227 + 116898595 MODEL JAAIVD010000003 pseudo 625836387 Cep250 centrosomal protein 250 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium assembly (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH Cone-Rod Dystrophy and Hearing Loss 2 (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 135315738 135360876 + 30032202 116902181 MODEL JAAIVD010000023;XM_032904538;XM_032904539;XM_032904541;XM_032904542;XM_032904543;XM_032904544 XP_032760429;XP_032760430;XP_032760432;XP_032760433;XP_032760434;XP_032760435 centrosome-associated protein CEP250 protein-coding 625836441 LOC116903172 uncharacterized LOC116903172 6 14735148 14736063 - 116903172 MODEL JAAIVD010000024;XR_004388257 ncrna 625836445 Mllt3 MLLT3 super elongation complex subunit ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K18ac reader activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 66061261 66316355 + 22301074;30032202 116900423 MODEL JAAIVD010000025;XM_032902169;XM_032902174 XP_032758060;XP_032758065 protein AF-9 protein-coding 625836463 LOC116890547 small nucleolar RNA SNORA17 1 176929123 176929267 - 116890547 MODEL JAAIVD010000025 pseudo 625836464 LOC116904442 60S ribosomal protein L21-like 6 122752425 122752943 + 116904442 MODEL JAAIVD010000024 pseudo 625836465 Psmb10 proteasome 20S subunit beta 10 INVOLVED IN cell morphogenesis (ortholog); T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); immunodeficiency 121 (ortholog); FOUND IN proteasome core complex (ortholog); spermatoproteasome complex (ortholog) 17 25676071 25678622 - 22301074 116886397 MODEL JAAIVD010000011;XM_032887866 XP_032743757 proteasome subunit beta type-10 protein-coding 625836477 Myo1b myosin IB ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament organization (ortholog); actin filament-based movement (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Hepatomegaly (ortholog); Weight Gain (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); brush border (ortholog) 4 123529900 123694861 + 22301074;30032202 116899375 MODEL JAAIVD010000003;XM_032901091 XP_032756982 unconventional myosin-Ib protein-coding 625836512 C9H16orf91 chromosome 9 C16orf91 homolog INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 2440932 2452159 + 116909138 MODEL JAAIVD010000002;XM_032912625 XP_032768516 protein CCSMST1 protein-coding 625836517 Cabp2 calcium binding protein 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN sensory perception of sound (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 93 (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 2 3555308 3561059 - 22301074 116893600 MODEL JAAIVD010000001;XM_032895302;XM_032895303;XM_032895304;XM_032895305 XP_032751193;XP_032751194;XP_032751195;XP_032751196 calcium-binding protein 2 protein-coding 625836536 C17H16orf46 chromosome 17 C16orf46 homolog FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 36606008 36616458 - 116886096 MODEL JAAIVD010000011;XM_032887421 XP_032743312 uncharacterized protein C16orf46 homolog protein-coding 625836543 Alg1 ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase ENCODES a protein that exhibits chitobiosyldiphosphodolichol beta-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH brain disease (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog) 9 16671174 16681330 - 30032202 116909224 MODEL JAAIVD010000002;XM_032912725 XP_032768616 chitobiosyldiphosphodolichol beta-mannosyltransferase protein-coding 625836560 LOC116903304 C-type lectin domain family 4 member A-like 6 24134930 24145126 - 116903304 MODEL JAAIVD010000024;XM_032905730 XP_032761621 protein-coding 625836570 Znf622 zinc finger protein 622 ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of JNK cascade (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) 3 154817443 154828973 - 22301074;30032202 116897065 MODEL JAAIVD010000012;XM_032898690 XP_032754581 protein-coding 625836580 Gimap1 GTPase, IMAP family member 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN B cell differentiation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 92230460 92234546 - 22301074;30032202 116903847 MODEL JAAIVD010000024;XM_032906578;XM_032906579 XP_032762469;XP_032762470 GTPase IMAP family member 1 protein-coding 625836591 LOC116901695 UPF0606 protein KIAA1549L-like 5 82081475 82324361 - 116901695 MODEL JAAIVD010000023;XM_032903824 XP_032759715 protein-coding 625836612 LOC116912955 small nucleolar RNA SNORA36 family 11 15245642 15245773 + 116912955 MODEL JAAIVD010000006;XR_004389522 snorna 625836615 LOC116903792 endogenous retrovirus group K member 6 Gag polyprotein-like 6 17471745 17480159 - 22301074 116903792 MODEL JAAIVD010000024;XM_032906485 XP_032762376 protein-coding 625836619 LOC116892878 nesprin-1 2 197461723 197565342 + 22301074 116892878 MODEL JAAIVD010000001;XM_032894788 XP_032750679 protein-coding 625836670 Cd28 CD28 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); negative regulation of gene expression (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 4 134828884 134854658 + 22301074;30032202 116898191 MODEL JAAIVD010000003;XM_032899554 XP_032755445 T-cell-specific surface glycoprotein CD28 protein-coding 625836678 Tmem79 transmembrane protein 79 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cornification (ortholog); cuticle development (ortholog); epithelial cell maturation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); trans-Golgi network membrane (ortholog) 3 65217943 65222759 + 30032202 116896693 MODEL JAAIVD010000012;XM_032898085;XM_032898087;XM_032898088;XM_032898089;XM_032898090;XM_032898091;XM_032898092 XP_032753976;XP_032753978;XP_032753979;XP_032753980;XP_032753981;XP_032753982;XP_032753983 protein-coding 625836699 Efcab12 EF-hand calcium binding domain 12 ASSOCIATED WITH autistic disorder (ortholog) 6 30886216 30902215 + 22301074 116904632 MODEL JAAIVD010000024;XM_032907424 XP_032763315 EF-hand calcium-binding domain-containing protein 12 protein-coding 625836711 LOC116890976 uncharacterized LOC116890976 2 10529244 10530183 - 116890976 MODEL JAAIVD010000001;XR_004386802 ncrna 625836715 LOC116912689 protein MEMO1 11 28349926 28351428 - 116912689 MODEL JAAIVD010000006;XM_032916824;XM_032916825 XP_032772715;XP_032772716 protein-coding 625836724 Sash1 SAM and SH3 domain containing 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of JUN kinase activity (ortholog); ASSOCIATED WITH Cancer, Alopecia, Pigment Dyscrasia, Onychodystrophy, and Keratoderma (ortholog); developmental and epileptic encephalopathy 13 (ortholog); Dyschromatosis Universalis Hereditaria 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 228217023 228382492 + 22301074 116893030 MODEL JAAIVD010000001;XM_032894991;XM_032894993 XP_032750882;XP_032750884 SAM and SH3 domain-containing protein 1 protein-coding 625836751 Ubl3 ubiquitin like 3 16 5296113 5342537 + 22301074 116885133 MODEL JAAIVD010000004;XM_032886308 XP_032742199 ubiquitin-like protein 3 protein-coding 625836760 LOC116887879 glucocorticoid modulatory element-binding protein 1-like X 49008573 49009688 + 116887879 MODEL JAAIVD010000014 pseudo 625836761 LOC116904252 28S ribosomal protein S21, mitochondrial-like 6 28878701 28884686 + 116904252 MODEL JAAIVD010000024 pseudo 625836762 Psen1 presenilin 1 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); aspartic-type endopeptidase activity (ortholog); ATPase binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 3 (ortholog); Alzheimer's disease 4 (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cell cortex (ortholog) 7 97779759 97829705 + 22301074;30032202 116905252 MODEL JAAIVD010000026;XM_032908099 XP_032763990 presenilin-1 protein-coding 625836778 LOC116910032 spermatid-specific linker histone H1-like protein 9 59414275 59415065 - 22301074 116910032 I6TS27 MODEL JAAIVD010000002;JQ914269;XM_032913818 AFM97411;XP_032769709 Hils1 histone H1-like protein in spermatids 1 protein-coding 625836783 Cdca4 cell division cycle associated 4 FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 130416073 130425272 - 30032202 116905522 MODEL JAAIVD010000026;XM_032908544;XM_032908545 XP_032764435;XP_032764436 cell division cycle-associated protein 4 protein-coding 625836792 Ndc80 NDC80 kinetochore complex component ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); kinetochore adaptor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); centrosome duplication (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 180953010 180984404 - 22301074;30032202 116899720 MODEL JAAIVD010000003;XM_032901760 XP_032757651 kinetochore protein NDC80 homolog protein-coding 625836813 Stk10 serine/threonine kinase 10 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN lymphocyte aggregation (ortholog); protein autophosphorylation (ortholog); regulation of lymphocyte migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 9 5377827 5466280 + 22301074 116909278 MODEL JAAIVD010000002;XM_032912813 XP_032768704 serine/threonine-protein kinase 10 protein-coding 625836836 Fcgrt Fc gamma receptor and transporter ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); IgG binding (ortholog); peptide antigen binding (ortholog) 2 154443009 154452871 + 2911353;30032202 116892170 MODEL JAAIVD010000001;X14323;XM_032893675;XM_032893676 CAA32503;XP_032749566;XP_032749567 Fc fragment of IgG receptor and transporter;IgG receptor FcRn large subunit p51;precursor polypetide (AA -22 to 344) protein-coding 625836850 LOC116890374 U6 spliceosomal RNA 1 36109341 36109441 - 116890374 MODEL JAAIVD010000025 pseudo 625836851 LOC116890505 small nucleolar RNA SNORA48 1 229192404 229192546 - 116890505 MODEL JAAIVD010000025;XR_004386690 snorna 625836854 LOC116888053 ras-related protein Rab-18-like X 87724266 87727148 - 116888053 MODEL JAAIVD010000014 pseudo 625836855 LOC116897606 small nucleolar RNA SNORA17 3 196907611 196907724 + 116897606 MODEL JAAIVD010000012 pseudo 625836856 Il6r interleukin 6 receptor ENCODES a protein that exhibits ciliary neurotrophic factor binding (ortholog); ciliary neurotrophic factor receptor activity (ortholog); cytokine receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); ciliary neurotrophic factor-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); ciliary neurotrophic factor receptor complex (ortholog) 3 63738759 63787388 + 22301074;30032202 116896631 MODEL JAAIVD010000012;XM_032897940;XM_032897941 XP_032753831;XP_032753832 interleukin-6 receptor subunit alpha protein-coding 625836872 Cd244 CD244 molecule ENCODES a protein that exhibits MHC class I protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN myeloid dendritic cell activation (ortholog); natural killer cell activation (ortholog); natural killer cell activation involved in immune response (ortholog); ASSOCIATED WITH prostate cancer (ortholog); rheumatoid arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog) 10 50732147 50753627 + 30032202 116911543 MODEL JAAIVD010000005;XM_032915532 XP_032771423 natural killer cell receptor 2B4 protein-coding 625836885 Tasor2 transcription activation suppressor family member 2 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 14 17917910 17967365 - 30032202 116883825 MODEL JAAIVD010000009;XM_032885079;XM_032885080;XM_032885081 XP_032740970;XP_032740971;XP_032740972 protein TASOR 2 protein-coding 625836917 LOC116902992 RNA-binding protein EWS-like 6 138605369 138607325 - 116902992 MODEL JAAIVD010000024 pseudo 625836918 LOC116911003 uncharacterized LOC116911003 10 18262260 18295713 + 116911003 MODEL JAAIVD010000005;XR_004389295 ncrna 625836923 Adam10 ADAM metallopeptidase domain 10 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallodipeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adherens junction organization (ortholog); amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 18 (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); dendritic spine (ortholog) 8 65020269 65132222 + 30032202 116907958 MODEL JAAIVD010000027;XM_032911186 XP_032767077 disintegrin and metalloproteinase domain-containing protein 10 protein-coding 625836943 LOC116909448 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial 9 4550054 4550588 + 22301074;30032202 116909448 MODEL JAAIVD010000002;XM_032913026 XP_032768917 protein-coding 625836948 Aldh1a2 aldehyde dehydrogenase 1 family member A2 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); retinal binding (ortholog); retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Coronary Occlusion (ortholog); Diaphragmatic Hernia 4 (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 8 65525687 65605800 + 30032202 116906699 MODEL JAAIVD010000027;XM_032909495 XP_032765386 retinal dehydrogenase 2 protein-coding 625836966 Klhl28 kelch like family member 28 7 78646748 78672400 - 22301074 116905102 MODEL JAAIVD010000026;XM_032907833 XP_032763724 kelch-like protein 28 protein-coding 625836975 LOC116905537 PRELI domain containing protein 3B-like 7 9643666 9644961 - 30032202 116905537 MODEL JAAIVD010000026;XM_032908576 XP_032764467 protein-coding 625836981 LOC116890553 small nucleolar RNA SNORA17 1 27468364 27468463 + 116890553 MODEL JAAIVD010000025 pseudo 625836982 LOC116894836 U6 spliceosomal RNA 2 101339789 101339895 + 116894836 MODEL JAAIVD010000001;XR_004387051 snrna 625836985 LOC116888702 actin, cytoplasmic 1-like X 3886673 3887685 + 116888702 MODEL JAAIVD010000014 pseudo 625836986 LOC116887963 mitochondrial glycine transporter-like X 66080360 66081439 - 30032202 116887963 MODEL JAAIVD010000014;XM_032889408 XP_032745299 protein-coding 625836989 COX2 MT 6999 7682 + 7751802 B7SE64 REVIEWED EU273707 ABX45236;YP_002791019 COII cytochrome c oxidase subunit II protein-coding 625836990 LOC116899884 small nucleolar RNA SNORA17 4 173351771 173351895 + 116899884 MODEL JAAIVD010000003 pseudo 625836991 P2ry1 purinergic receptor P2Y1 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); blood vessel diameter maintenance (ortholog); cellular response to purine-containing compound (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); impotence (ortholog); thrombosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell body (ortholog) 3 94056980 94061973 - 22301074;30032202 116896834 MODEL JAAIVD010000012;XM_032898315 XP_032754206 P2Y purinoceptor 1 protein-coding 625836997 LOC116884094 small nucleolar RNA SNORA17 14 25506084 25506211 - 116884094 MODEL JAAIVD010000009;XR_004385833 snorna 625837000 LOC116889501 small nucleolar RNA SNORA48 X 12032155 12032294 - 116889501 MODEL JAAIVD010000014;XR_004386448 snorna 625837003 Rgs18 regulator of G protein signaling 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 10 24611427 24634681 - 116911164 MODEL JAAIVD010000005;XM_032915026 XP_032770917 regulator of G-protein signaling 18 protein-coding 625837012 B4galt2 beta-1,4-galactosyltransferase 2 INVOLVED IN brain development (ortholog); cerebellar Purkinje cell layer development (ortholog); locomotory behavior (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 1 39138586 39148428 + 22301074;30032202 116898039 MODEL JAAIVD010000025;XM_032899435 XP_032755326 protein-coding 625837023 LOC116887533 ribosyldihydronicotinamide dehydrogenase [quinone]-like 18 15255046 15255844 + 116887533 MODEL JAAIVD010000013 pseudo 625837024 LOC116904390 hsc70-interacting protein-like 6 95780147 95781221 - 116904390 MODEL JAAIVD010000024 pseudo 625837025 LOC116906637 olfactory receptor 6X1 8 34784021 34784959 + 22301074;30032202 116906637 MODEL JAAIVD010000027;XM_032909414 XP_032765305 protein-coding 625837028 LOC116902446 uncharacterized LOC116902446 5 158588102 158592582 - 116902446 MODEL JAAIVD010000023;XR_004388075 ncrna 625837033 LOC116890538 small nucleolar RNA SNORA17 1 45307215 45307341 - 116890538 MODEL JAAIVD010000025;XR_004386719 snorna 625837036 Ppm1l protein phosphatase, Mg2+/Mn2+ dependent 1L ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); MAPK cascade (ortholog); ASSOCIATED WITH obesity (ortholog) 3 85756567 85761334 - 30032202 116896792 MODEL JAAIVD010000012;XM_032898261 XP_032754152 protein phosphatase 1L protein-coding 625837042 LOC116890452 small nucleolar RNA SNORD38 1 40778068 40778137 - 116890452 MODEL JAAIVD010000025;XR_004386644 snorna 625837045 LOC116897885 heterogeneous nuclear ribonucleoprotein Q-like 4 29689849 29691337 - 116897885 MODEL JAAIVD010000003 pseudo 625837046 C2H10orf143 chromosome 2 C10orf143 homolog 2 64531703 64566556 + 116891376 MODEL JAAIVD010000001;XM_032892377 XP_032748268 uncharacterized protein C10orf143 homolog protein-coding 625837054 LOC116886551 uncharacterized LOC116886551 17 23920895 23924468 + 116886551 MODEL JAAIVD010000011;XR_004386112 ncrna 625837058 Xpo5 exportin 5 ENCODES a protein that exhibits mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); pre-miRNA binding (ortholog); INVOLVED IN pre-miRNA export from nucleus (ortholog); protein export from nucleus (ortholog); PARTICIPATES IN microRNA pathway; ribosome biogenesis pathway; ASSOCIATED WITH breast cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 83627678 83665371 - 22301074;30032202 116899118 MODEL JAAIVD010000003;XM_032900640 XP_032756531 exportin-5 protein-coding 625837094 LOC116889814 endoplasmic reticulum-Golgi intermediate compartment protein 2-like 1 150203568 150204614 + 116889814 MODEL JAAIVD010000025 pseudo 625837095 LOC116894324 40S ribosomal protein S24-like 2 151464749 151465248 + 22301074;30032202 116894324 MODEL JAAIVD010000001;XM_032896020 XP_032751911 protein-coding 625837100 Nkx2-4 NK2 homeobox 4 5 126680045 126681588 - 22301074;30032202 116900664 MODEL JAAIVD010000023;XM_032902367 XP_032758258 homeobox protein Nkx-2.4 protein-coding 625837105 Ate1 arginyltransferase 1 ENCODES a protein that exhibits arginyl-tRNA--protein transferase activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); protein K27-linked ubiquitination (ortholog); protein K63-linked ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 71570421 71685201 + 22301074;30032202 116891422 MODEL JAAIVD010000001;XM_032892456;XM_032892457;XM_032892459;XM_032892460;XM_032892461;XM_032892462;XM_032892463 XP_032748347;XP_032748348;XP_032748350;XP_032748351;XP_032748352;XP_032748353;XP_032748354 arginyl-tRNA--protein transferase 1 protein-coding 625837135 LOC116900140 olfactory receptor 1L4-like 5 14744822 14745814 - 22301074 116900140 MODEL JAAIVD010000023;XM_032901914 XP_032757805 protein-coding 625837138 LOC116887794 small nucleolar RNA SNORA48 18 45431889 45432032 - 116887794 MODEL JAAIVD010000013;XR_004386289 snorna 625837141 LOC116884943 apoptosis inhibitor 5-like 15 23310489 23327853 - 30032202 116884943 MODEL JAAIVD010000010;XM_032886151 XP_032742042 protein-coding 625837148 Pdzk1ip1 PDZK1 interacting protein 1 ASSOCIATED WITH Prostatic Neoplasms (ortholog) 1 41489580 41501501 - 116887537 MODEL JAAIVD010000025;XM_032889372 XP_032745263 PDZK1-interacting protein 1 protein-coding 625837156 Il17b interleukin 17B ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Keratoconus 1 (ortholog) 15 70264651 70269103 - 22301074 116884700 MODEL JAAIVD010000010;XM_032885888 XP_032741779 interleukin-17B protein-coding 625837163 LOC116893837 pancreatic lipase-related protein 2 2 57339547 57357943 - 22301074;30032202 116893837 MODEL JAAIVD010000001;XM_032895553 XP_032751444 protein-coding 625837179 LOC116888874 U1 small nuclear ribonucleoprotein C-like X 88241957 88242426 - 116888874 MODEL JAAIVD010000014 pseudo 625837180 Sdk1 sidekick cell adhesion molecule 1 INVOLVED IN behavioral response to cocaine (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); megacolon (ortholog); prostate cancer (ortholog) 16 10947789 11377723 - 22301074 116885874 MODEL JAAIVD010000004;XM_032887198 XP_032743089 protein sidekick-1 protein-coding 625837227 Sntn sentan, cilia apical structure protein FOUND IN cilium (ortholog) 12 83635695 83648914 + 22301074 116914005 MODEL JAAIVD010000007;XM_032918277 XP_032774168 sentan protein-coding 625837235 Slc39a13 solute carrier family 39 member 13 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); connective tissue development (ortholog); intracellular zinc ion homeostasis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); bone disease (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 5 65230153 65238186 - 22301074;30032202 116901609 MODEL JAAIVD010000023;XM_032903646;XR_004388007 XP_032759537 zinc transporter ZIP13 protein-coding 625837253 Adgrf4 adhesion G protein-coupled receptor F4 INVOLVED IN erythrocyte development (ortholog); gene expression (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH schizophrenia (ortholog) 4 93392834 93424390 + 22301074 116898084 MODEL JAAIVD010000003;XM_032899471 XP_032755362 protein-coding 625837267 LOC116906448 small nucleolar RNA SNORA17 7 44417982 44418116 + 116906448 MODEL JAAIVD010000026;XR_004388707 snorna 625837270 LOC116909165 olfactory receptor 1468-like 9 44559868 44560803 + 22301074;30032202 116909165 MODEL JAAIVD010000002;XM_032912655 XP_032768546 protein-coding 625837273 LOC116895431 Fc receptor-like protein 1 3 66175995 66209056 - 22301074;30032202 116895431 MODEL JAAIVD010000012;XM_032896708;XM_032896709;XM_032896710;XM_032896712;XM_032896713 XP_032752599;XP_032752600;XP_032752601;XP_032752603;XP_032752604 CD5 antigen-like protein-coding 625837303 C2H19orf84 chromosome 2 C19orf84 homolog INVOLVED IN transposable element silencing (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) 2 156050147 156051141 - 116894369 MODEL JAAIVD010000001;XM_032896074 XP_032751965 uncharacterized protein C19orf84 homolog protein-coding 625837307 LOC116894388 olfactory receptor 13A1-like 2 156852174 156853124 + 22301074 116894388 MODEL JAAIVD010000001;XM_032896095 XP_032751986 protein-coding 625837311 LOC116910664 small nucleolar RNA R38 9 67398916 67398991 - 116910664 MODEL JAAIVD010000002;XR_004389196 snorna 625837314 Duoxa1 dual oxidase maturation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); positive regulation of hydrogen peroxide biosynthetic process (ortholog); FOUND IN cell leading edge (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 5 100409682 100420192 - 22301074;30032202 116900606 MODEL JAAIVD010000023;XM_032902322;XM_032902323 XP_032758213;XP_032758214 protein-coding 625837330 LOC116904749 small nucleolar RNA SNORA17 6 92051008 92051130 - 116904749 MODEL JAAIVD010000024 pseudo 625837331 LOC116900256 olfactory receptor 2G3-like 5 63138526 63139461 + 22301074 116900256 MODEL JAAIVD010000023;XM_032902008 XP_032757899 protein-coding 625837334 Trpv3 transient receptor potential cation channel subfamily V member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN negative regulation of hair cycle (ortholog); positive regulation of calcium ion import (ortholog); response to temperature stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); atopic dermatitis (ortholog); autosomal dominant mutilating palmoplantar keratoderma with periorificial keratotic plaques (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) 9 42215606 42247894 - 22301074;30032202 116909568 MODEL JAAIVD010000002;XM_032913186 XP_032769077 protein-coding 625837356 Yaf2 YY1 associated factor 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 266217465 266271712 - 30032202 116884264 MODEL JAAIVD010000025;XM_032885352 XP_032741243 YY1-associated factor 2 protein-coding 625837364 LOC116908928 keratin-associated protein 2-1-like 9 54434927 54435325 - 116908928 MODEL JAAIVD010000002 pseudo 625837365 Dexi Dexi homolog 9 11808466 11811953 + 116909118 MODEL JAAIVD010000002;XM_032912594 XP_032768485 dexamethasone-induced protein protein-coding 625837371 Timp4 TIMP metallopeptidase inhibitor 4 INVOLVED IN Notch signaling pathway (ortholog); ovulation cycle (ortholog); response to cytokine (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arteriovenous Fistula (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog); sarcomere (ortholog) 6 31460689 31467850 + 22301074;30032202 116903388 MODEL JAAIVD010000024;XM_032905884;XM_032905885 XP_032761775;XP_032761776 metalloproteinase inhibitor 4 protein-coding 625837385 Rtbdn retbindin ENCODES a protein that exhibits riboflavin binding (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN external side of plasma membrane (ortholog); interphotoreceptor matrix (ortholog) 17 15332370 15339196 - 30032202 116886039 MODEL JAAIVD010000011;XM_032887342 XP_032743233 protein-coding 625837395 Aig1 androgen induced 1 ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN long-chain fatty acid catabolic process (ortholog); FOUND IN membrane (ortholog) 2 223314406 223537553 + 22301074;30032202 116893006 MODEL JAAIVD010000001;XM_032894968;XM_032894969 XP_032750859;XP_032750860 androgen-induced gene 1 protein protein-coding 625837410 LOC116904765 small nucleolar RNA SNORA17 6 49260751 49260882 - 116904765 MODEL JAAIVD010000024;XR_004388438 snorna 625837413 Htr3b 5-hydroxytryptamine receptor 3B ENCODES a protein that exhibits serotonin-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); inorganic cation transmembrane transport (ortholog); positive regulation of ion transmembrane transporter activity (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); neuronal cell body (ortholog) 8 43426717 43456607 - 22301074;30032202 116907999 MODEL JAAIVD010000027;XM_032911255 XP_032767146 protein-coding 625837425 LOC116894208 olfactory receptor 502-like 2 106445593 106446538 + 22301074;30032202 116894208 MODEL JAAIVD010000001;XM_032895920 XP_032751811 protein-coding 625837428 Prelid1 PRELI domain containing 1 ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of release of cytochrome c from mitochondria (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 14 73646732 73649802 + 30032202 116883466 MODEL JAAIVD010000009;XM_032884618;XM_032884619 XP_032740509;XP_032740510 PRELI domain-containing protein 1, mitochondrial protein-coding 625837440 Cdpf1 cysteine rich DPF motif domain containing 1 1 255151979 255161042 - 116914688 MODEL JAAIVD010000025;XM_032919112;XM_032919119;XM_032919126 XP_032775003;XP_032775010;XP_032775017 cysteine-rich DPF motif domain-containing protein 1 protein-coding 625837458 LOC116890519 U1 spliceosomal RNA 1 157285093 157285259 - 116890519 MODEL JAAIVD010000025;XR_004386701 snrna 625837461 LOC116895846 phosphoserine aminotransferase-like 3 85661335 85662370 + 116895846 MODEL JAAIVD010000012 pseudo 625837462 LOC116893355 zinc finger protein 709-like 2 160143636 160157490 - 30032202 116893355 MODEL JAAIVD010000001;XM_032895160 XP_032751051 protein-coding 625837471 Phkb phosphorylase kinase regulatory subunit beta INVOLVED IN glucose homeostasis (ortholog); positive regulation of glycogen catabolic process (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease IXB (ortholog); FOUND IN phosphorylase kinase complex (ortholog) 17 13263325 13438974 + 30032202 116886321 MODEL JAAIVD010000011;XM_032887765;XM_032887766;XM_032887767;XM_032887768;XM_032887769 XP_032743656;XP_032743657;XP_032743658;XP_032743659;XP_032743660 phosphorylase b kinase regulatory subunit beta protein-coding 625837522 LOC116913228 alpha-enolase-like 12 71391573 71392531 - 116913228 MODEL JAAIVD010000007 pseudo 625837523 Carnmt1 carnosine N-methyltransferase 1 ENCODES a protein that exhibits carnosine N-methyltransferase activity (ortholog); protein homodimerization activity (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN carnosine metabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 18683517 18713409 + 22301074;30032202 116891017 MODEL JAAIVD010000001;XM_032891695;XM_032891696;XM_032891697 XP_032747586;XP_032747587;XP_032747588 carnosine N-methyltransferase protein-coding 625837542 Mst1r macrophage stimulating 1 receptor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to virus (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); multiple myeloma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN plasma membrane (ortholog); stress fiber (ortholog); vacuole (ortholog) 8 99239186 99252726 + 22301074;30032202 116907554 MODEL JAAIVD010000027;XM_032910576 XP_032766467 macrophage-stimulating protein receptor protein-coding 625837566 Lrig1 leucine rich repeats and immunoglobulin like domains 1 INVOLVED IN hair cycle process (ortholog); innervation (ortholog); otolith morphogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog) 6 52262013 52363909 + 22301074 116903482 MODEL JAAIVD010000024;XM_032906048 XP_032761939 leucine-rich repeats and immunoglobulin-like domains protein 1 protein-coding 625837589 LOC116908355 small nucleolar RNA SNORD50 8 81415775 81415846 + 116908355 MODEL JAAIVD010000027;XR_004388905 snorna 625837592 LOC116894840 U6 spliceosomal RNA 2 186304876 186304982 + 116894840 MODEL JAAIVD010000001;XR_004387055 snrna 625837595 LOC116888789 E3 ubiquitin-protein ligase Topors-like 1 102466342 102468890 + 30032202 116888789 MODEL JAAIVD010000025;XM_032890072 XP_032745963 protein-coding 625837600 LOC116895771 zinc finger protein 431-like 1 26628071 26635959 - 22301074 116895771 MODEL JAAIVD010000025;XM_032896925;XM_032896930 XP_032752816;XP_032752821 protein-coding 625837613 Klrk1 killer cell lectin like receptor K1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to Gram-positive bacterium (ortholog); natural killer cell activation (ortholog); ASSOCIATED WITH Adenoviridae Infections (ortholog); AIDS-Related Complex (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 17976229 17986037 + 30032202 116903189 MODEL JAAIVD010000024;XM_032905563;XM_032905564;XM_032905565 XP_032761454;XP_032761455;XP_032761456 NKG2-D type II integral membrane protein protein-coding 625837632 Tex11 testis expressed 11 INVOLVED IN chiasma assembly (ortholog); ectopic germ cell programmed cell death (ortholog); fertilization (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); condensed nuclear chromosome (ortholog) X 59461661 59622674 + 22301074;30032202 116887927 MODEL JAAIVD010000014;XM_032889391 XP_032745282 testis-expressed protein 11 protein-coding 625837653 Ube2q2 ubiquitin conjugating enzyme E2 Q2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog) 8 49207530 49262153 + 22301074 116907992 MODEL JAAIVD010000027;XM_032911244;XM_032911245 XP_032767135;XP_032767136 ubiquitin-conjugating enzyme E2 Q2 protein-coding 625837673 LOC116902520 U7 small nuclear RNA 5 17445345 17445406 + 116902520 MODEL JAAIVD010000023;XR_004388129 snrna 625837676 Arr3 arrestin 3 ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; visual phototransduction pathway; ASSOCIATED WITH genetic disease (ortholog); Myopia 26, X-Linked, Female-Limited (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); synapse (ortholog) X 58358902 58366647 + 22301074;30032202 116887920 MODEL JAAIVD010000014;XM_032889386 XP_032745277 arrestin-C protein-coding 625837692 Lmod2 leiomodin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1BB (ortholog); dilated cardiomyopathy 2G (ortholog); FOUND IN actin filament (ortholog); cardiac myofibril (ortholog); M band (ortholog) 6 114735860 114743628 - 22301074;30032202 116902928 MODEL JAAIVD010000024;XM_032905251;XM_032905252 XP_032761142;XP_032761143 leiomodin-2 protein-coding 625837703 Pfdn1 prefoldin subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein folding chaperone (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell activation (ortholog); cerebellum development (ortholog); FOUND IN centrosome (ortholog); prefoldin complex (ortholog) 15 7916190 7973693 + 22301074;30032202 116885003 MODEL JAAIVD010000010;XM_032886235;XM_032886236;XM_032886237;XM_032886238 XP_032742126;XP_032742127;XP_032742128;XP_032742129 protein-coding 625837720 LOC116898130 cryptic protein-like 4 110763059 110770324 + 30032202 116898130 MODEL JAAIVD010000003;XM_032899504;XM_032899505 XP_032755395;XP_032755396 protein-coding 625837734 Smim18 small integral membrane protein 18 13 53266761 53274224 + 116914501 MODEL JAAIVD010000008;XM_032918815;XM_032918816;XM_032918817;XM_032918818 XP_032774706;XP_032774707;XP_032774708;XP_032774709 protein-coding 625837750 LOC116890265 sugar transporter SWEET1-like 1 14008484 14010665 - 116890265 MODEL JAAIVD010000025 pseudo 625837751 Cryba4 crystallin beta A4 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 23 (ortholog); genetic disease (ortholog) 16 41717887 41730347 + 30032202 116885717 MODEL JAAIVD010000004;XM_032887027;XM_032887028 XP_032742918;XP_032742919 beta-crystallin A4 protein-coding 625837764 Arb2a ARB2 cotranscriptional regulator A INVOLVED IN neural crest cell development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 3 217521713 217790291 - 30032202 116896090 MODEL JAAIVD010000012;XM_032897067 XP_032752958 Fam172a cotranscriptional regulator FAM172A;family with sequence similarity 172 member A protein-coding 625837775 Tbrg4 transforming growth factor beta regulator 4 INVOLVED IN mitochondrial mRNA processing (ortholog); mRNA metabolic process (ortholog); regulation of mitochondrial mRNA stability (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 11 75546214 75554359 - 22301074;30032202 116912358 MODEL JAAIVD010000006;XM_032916413;XM_032916414;XM_032916415;XM_032916416;XM_032916417 XP_032772304;XP_032772305;XP_032772306;XP_032772307;XP_032772308 FAST kinase domain-containing protein 4 protein-coding 625837806 LOC116907211 uncharacterized LOC116907211 1 159654287 159659332 + 116907211 MODEL JAAIVD010000025;XR_004388810 ncrna 625837810 Efcab14 EF-hand calcium binding domain 14 1 39426325 39466176 + 22301074 116898087 MODEL JAAIVD010000025;XM_032899477 XP_032755368 EF-hand calcium-binding domain-containing protein 14 protein-coding 625837826 LOC116889157 peroxiredoxin-4-like X 37050253 37111339 + 116889157 MODEL JAAIVD010000014 pseudo 625837827 LOC116910308 protein transport protein Sec61 subunit gamma-like 9 49681118 49683012 - 22301074;30032202 116910308 MODEL JAAIVD010000002;XM_032914174 XP_032770065 protein-coding 625837831 Cd4 CD4 molecule ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); AIDS-Related Opportunistic Infections (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 6 23009495 23027872 + 22301074;30032202 116903269 MODEL JAAIVD010000024;XM_032905682 XP_032761573 T-cell surface glycoprotein CD4 protein-coding 625837844 Sugct succinyl-CoA:glutarate-CoA transferase ENCODES a protein that exhibits succinate-hydroxymethylglutarate CoA-transferase activity (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); glutaric acidemia type 3 (ortholog); migraine (ortholog); FOUND IN mitochondrion (ortholog) 14 35630113 36422333 - 22301074 116883191 MODEL JAAIVD010000009;XM_032884226 XP_032740117 succinate--hydroxymethylglutarate CoA-transferase protein-coding 625837861 Evc2 EvC ciliary complex subunit 2 INVOLVED IN smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); Beemer-Langer syndrome (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); nucleus (ortholog) 11 67731686 67818857 - 22301074;30032202 116912792 MODEL JAAIVD010000006;XM_032916954 XP_032772845 limbin protein-coding 625837884 Snx1 sorting nexin 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal transport (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); early endosome (ortholog) 8 60422208 60460329 - 22301074;30032202 116906721 MODEL JAAIVD010000027;XM_032909530 XP_032765421 sorting nexin-1 protein-coding 625837903 Myl6 myosin light chain 6 ENCODES a protein that exhibits microfilament motor activity (ortholog); structural constituent of muscle (ortholog); FOUND IN brush border (ortholog); unconventional myosin complex (ortholog) 1 155954367 155957400 - 22301074;30032202 116906148 MODEL JAAIVD010000025;XM_032909133;XM_032909140;XM_032909143;XM_032909149 XP_032765024;XP_032765031;XP_032765034;XP_032765040 myosin light polypeptide 6 protein-coding 625837923 LOC116913160 Y-linked testis-specific protein 1-like 12 45937083 45941982 - 116913160 MODEL JAAIVD010000007 pseudo 625837924 Pde6a phosphodiesterase 6A INVOLVED IN photoreceptor cell maintenance (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog) 15 70659965 70728824 - 22301074 116884769 MODEL JAAIVD010000010;XM_032885986 XP_032741877 rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha protein-coding 625837950 LOC116887659 60S ribosomal protein L17-like 1 53520783 53521355 - 116887659 MODEL JAAIVD010000025 pseudo 625837951 LOC116883456 serine/threonine-protein kinase NLK-like 14 40945956 40947525 - 116883456 MODEL JAAIVD010000009 pseudo 625837952 N4bp2l1 NEDD4 binding protein 2 like 1 16 125762 149406 - 116885560 MODEL JAAIVD010000004;XM_032886853 XP_032742744 NEDD4-binding protein 2-like 1 protein-coding 625837961 LOC116895057 small nucleolar RNA SNORA17 2 204419544 204419666 - 116895057 MODEL JAAIVD010000001 pseudo 625837962 Tep1 telomerase associated protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); p53 binding (ortholog); RNA binding (ortholog); INVOLVED IN telomere maintenance via recombination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); intrahepatic cholangiocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); ribonucleoprotein complex (ortholog) 12 72441490 72488924 + 22301074;30032202 116913428 MODEL JAAIVD010000007;XM_032917620 XP_032773511 telomerase protein component 1 protein-coding 625838021 LOC116895375 60S acidic ribosomal protein P0-like 3 53679377 53680321 - 22301074;30032202 116895375 MODEL JAAIVD010000012;XM_032896669 XP_032752560 protein-coding 625838024 LOC116897432 U6 spliceosomal RNA 3 179757404 179757510 - 116897432 MODEL JAAIVD010000012;XR_004387473 snrna 625838027 Nde1 nudE neurodevelopment protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN centrosome duplication (ortholog); cerebral cortex development (ortholog); establishment of mitotic spindle orientation (ortholog); ASSOCIATED WITH Familial Thoracic Aortic Aneurysm 4 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); kinetochore (ortholog); microtubule organizing center (ortholog) 9 8038031 8077922 - 30032202 116909883 MODEL JAAIVD010000002;XM_032913621 XP_032769512 nuclear distribution protein nudE homolog 1 protein-coding 625838040 LOC116913650 olfactory receptor 8G1-like 12 56615 62312 - 22301074;30032202 116913650 MODEL JAAIVD010000007;XM_032917919 XP_032773810 protein-coding 625838046 Jph4 junctophilin 4 INVOLVED IN learning (ortholog); neuromuscular process controlling balance (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN dendritic shaft (ortholog); smooth endoplasmic reticulum (ortholog) 12 69882280 69891655 + 22301074;30032202 116913499 MODEL JAAIVD010000007;XM_032917701 XP_032773592 junctophilin-4 protein-coding 625838056 Utp20 UTP20 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); FOUND IN nucleolus (ortholog); plasma membrane (ortholog); small-subunit processome (ortholog) 1 167797561 167879274 - 30032202 116907812 MODEL JAAIVD010000025;XM_032910993 XP_032766884 small subunit processome component 20 homolog protein-coding 625838122 LOC116893680 olfactory receptor 5AN1-like 2 12379707 12380648 - 22301074;30032202 116893680 MODEL JAAIVD010000001;XM_032895397 XP_032751288 protein-coding 625838125 Ssbp3 single stranded DNA binding protein 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN head development (ortholog); head morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN protein-containing complex (ortholog); transcription regulator complex (ortholog) 1 47763856 47900553 - 22301074;30032202 116899333 MODEL JAAIVD010000025;XM_032901023;XM_032901029;XM_032901037;XM_032901047;XM_032901057;XM_032901066 XP_032756914;XP_032756920;XP_032756928;XP_032756938;XP_032756948;XP_032756957 single-stranded DNA-binding protein 3 protein-coding 625838162 LOC116904470 transcription termination factor 1, mitochondrial-like 6 136482080 136483146 + 116904470 MODEL JAAIVD010000024 pseudo 625838163 LOC116904796 U2 spliceosomal RNA 6 42870562 42870701 - 116904796 MODEL JAAIVD010000024 pseudo 625838164 Flrt3 fibronectin leucine rich transmembrane protein 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); embryonic morphogenesis (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 21 with or without anosmia (ortholog); Spontaneous Abortions (ortholog); FOUND IN axon terminus (ortholog); axonal growth cone (ortholog); cell junction (ortholog) 5 119923154 119936491 - 22301074;30032202 116899995 MODEL JAAIVD010000023;XM_032901804 XP_032757695 leucine-rich repeat transmembrane protein FLRT3 protein-coding 625838171 Sptlc1 serine palmitoyltransferase long chain base subunit 1 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); positive regulation of lipophagy (ortholog); regulation of fat cell apoptotic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); serine palmitoyltransferase complex (ortholog) 14 71644251 71683239 - 22301074;30032202 116883375 MODEL JAAIVD010000009;XM_032884491 XP_032740382 serine palmitoyltransferase 1 protein-coding 625838190 Cdhr2 cadherin related family member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell-cell adhesion mediated by cadherin (ortholog); epithelial cell differentiation (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 14 73043061 73080094 + 22301074;30032202 116915229 MODEL JAAIVD010000009;XM_032919618 XP_032775509 cadherin-related family member 2 protein-coding 625838226 Znf688 zinc finger protein 688 2 74469903 74473131 + 22301074 116891475 MODEL JAAIVD010000001;XM_032892576 XP_032748467 protein-coding 625838233 LOC116900935 60S ribosomal protein L6-like 5 83212157 83213038 - 116900935 MODEL JAAIVD010000023 pseudo 625838234 LOC116897731 NEDD4-binding protein 1-like 4 93204675 93207179 - 116897731 MODEL JAAIVD010000003 pseudo 625838235 Bend6 BEN domain containing 6 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN nucleus (ortholog) 4 110107321 110137250 - 22301074;30032202 116899269 MODEL JAAIVD010000003;XM_032900892 XP_032756783 BEN domain-containing protein 6 protein-coding 625838245 Plag1 PLAG1 zinc finger ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gland morphogenesis (ortholog); multicellular organism growth (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); nuclear speck (ortholog) 7 72775543 72819129 + 30032202 116905087 MODEL JAAIVD010000026;XM_032907806;XM_032907807;XM_032907808 XP_032763697;XP_032763698;XP_032763699 zinc finger protein PLAG1 protein-coding 625838261 Naa35 N-alpha-acetyltransferase 35, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); smooth muscle cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatC complex (ortholog) 14 78494326 78548133 - 22301074;30032202 116883805 MODEL JAAIVD010000009;XM_032885052;XM_032885053;XM_032885054 XP_032740943;XP_032740944;XP_032740945 protein-coding 625838292 LOC116894999 small nucleolar RNA SNORA29 2 191647120 191647256 + 116894999 MODEL JAAIVD010000001;XR_004387188 snorna 625838295 LOC116889072 protein FAM156A/FAM156B-like X 17396279 17396691 + 116889072 MODEL JAAIVD010000014 pseudo 625838296 LOC116902589 small nucleolar RNA SNORA17 5 107650102 107650228 + 116902589 MODEL JAAIVD010000023;XR_004388181 snorna 625838299 LOC116910679 small nucleolar RNA SNORA44 9 3510078 3510183 - 116910679 MODEL JAAIVD010000002;XR_004389210 snorna 625838302 LOC116893614 tumor necrosis factor receptor superfamily member 22-like 2 6032845 6046585 + 22301074;30032202 116893614 MODEL JAAIVD010000001;XM_032895322;XM_032895323;XM_032895324;XM_032895325 XP_032751213;XP_032751214;XP_032751215;XP_032751216 protein-coding 625838320 LOC116890313 U4 spliceosomal RNA 1 38446875 38446987 + 116890313 MODEL JAAIVD010000025 pseudo 625838321 Plpp7 phospholipid phosphatase 7 (inactive) INVOLVED IN negative regulation of myotube differentiation (ortholog); FOUND IN nuclear envelope (ortholog) 5 3522410 3537041 - 30032202 116901156 MODEL JAAIVD010000023;XM_032902797 XP_032758688 inactive phospholipid phosphatase 7 protein-coding 625838327 Cabp1 calcium binding protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of cell communication by electrical coupling (ortholog); negative regulation of protein import into nucleus (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); schizophrenia (ortholog); Serotonin Syndrome (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 16 38634337 38660134 + 22301074 116885387 MODEL JAAIVD010000004;XM_032886667 XP_032742558 calcium-binding protein 1 protein-coding 625838337 LOC116908305 serine protease 42-like 8 101378434 101383547 + 22301074 116908305 MODEL JAAIVD010000027;XM_032911582 XP_032767473 protein-coding 625838345 Ankrd30a ankyrin repeat domain 30A ASSOCIATED WITH Breast Cancer, Familial (ortholog) 6 28178338 28250474 + 22301074 116903347 MODEL JAAIVD010000024;XM_032905809 XP_032761700 ankyrin repeat domain-containing protein 30A protein-coding 625838383 Cct4 chaperonin containing TCP1 subunit 4 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH hereditary sensory neuropathy (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) 11 93889264 93901736 - 22301074;30032202 116912289 MODEL JAAIVD010000006;XM_032916288 XP_032772179 T-complex protein 1 subunit delta protein-coding 625838401 Chkb choline kinase beta ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN muscle organ development (ortholog); phosphatidylcholine biosynthetic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); megaconial type congenital muscular dystrophy (ortholog); muscular dystrophy (ortholog) 1 258732697 258736121 - 30032202 116915162 MODEL JAAIVD010000025;XM_032919567;XM_032919569 XP_032775458;XP_032775460 choline/ethanolamine kinase protein-coding 625838419 Slc38a5 solute carrier family 38 member 5 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); amino acid import across plasma membrane (ortholog); asparagine transmembrane transport (ortholog); ASSOCIATED WITH Endotoxemia (ortholog); FOUND IN plasma membrane (ortholog) X 15681661 15689739 + 30032202 116889011 MODEL JAAIVD010000014;XM_032890221 XP_032746112 sodium-coupled neutral amino acid transporter 5 protein-coding 625838437 LOC116889059 rhox homeobox family member 1-like X 103414119 103418290 - 22301074 116889059 MODEL JAAIVD010000014;XM_032890247 XP_032746138 protein-coding 625838444 Pde8b phosphodiesterase 8B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN behavioral fear response (ortholog); negative regulation of insulin secretion (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH basal ganglia disease (ortholog); congenital adrenal hyperplasia (ortholog); Dysarthria (ortholog) 3 201115445 201314526 + 22301074;30032202 116897281 MODEL JAAIVD010000012;XM_032899014 XP_032754905 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8B protein-coding 625838470 Capns2 calpain small subunit 2 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog) 22301074 116889777 MODEL JAAIVD010000238;XM_032890633 XP_032746524 protein-coding 625838471 Chst4 carbohydrate sulfotransferase 4 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN leukocyte tethering or rolling (ortholog); N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN trans-Golgi network (ortholog) 17 29730011 29741173 - 22301074;30032202 116886435 MODEL JAAIVD010000011;XM_032887918;XM_032887920 XP_032743809;XP_032743811 protein-coding 625838480 Ccr9 C-C motif chemokine receptor 9 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) 8 114886727 114889414 + 22301074;30032202 116907068 MODEL JAAIVD010000027;XM_032910023 XP_032765914 C-C chemokine receptor type 9 protein-coding 625838485 LOC116894110 olfactory receptor 52N4 2 103606945 103607910 + 22301074 116894110 MODEL JAAIVD010000001;XM_032895829 XP_032751720 protein-coding 625838488 LOC116913150 putative sperm motility kinase W 12 41496990 41498510 + 22301074;30032202 116913150 MODEL JAAIVD010000007;XM_032917362 XP_032773253 protein-coding 625838491 Ttll12 tubulin tyrosine ligase like 12 ENCODES a protein that exhibits histone H4K20 trimethyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); tubulin-tyrosine ligase activity (ortholog); INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 252994448 253013655 - 22301074 116914447 MODEL JAAIVD010000025;XM_032918752 XP_032774643 tubulin--tyrosine ligase-like protein 12 protein-coding 625838509 LOC116888823 eukaryotic translation initiation factor 4B-like X 107997933 107999926 - 116888823 MODEL JAAIVD010000014;XR_004386341 pseudo 625838512 LOC116891025 aldehyde dehydrogenase, cytosolic 1 2 20779399 20833376 - 30032202 116891025 MODEL JAAIVD010000001;XM_032891706;XM_032891707 XP_032747597;XP_032747598 protein-coding 625838533 Slc39a6 solute carrier family 39 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); lymphocyte activation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); lamellipodium membrane (ortholog) 15 19267922 19288840 + 22301074;30032202 116884265 MODEL JAAIVD010000010;XM_032885349 XP_032741240 zinc transporter ZIP6 protein-coding 625838547 Stom stomatin ENCODES a protein that exhibits identical protein binding (ortholog); ion channel inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN host-mediated activation of viral genome replication (ortholog); positive regulation of protein targeting to membrane (ortholog); positive regulation of viral process (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 5 302515 324939 + 30032202 116901101 MODEL JAAIVD010000023;XM_032902664 XP_032758555 erythrocyte band 7 integral membrane protein protein-coding 625838558 LOC116904273 polymerase delta-interacting protein 2-like 6 41823917 41825599 + 116904273 MODEL JAAIVD010000024 pseudo 625838559 C4bpa complement component 4 binding protein alpha INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Radiation Pneumonitis (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal vesicle (ortholog); cell body (ortholog) 10 5154874 5189274 + 30032202 116911290 MODEL JAAIVD010000005;XM_032915196;XM_032915197 XP_032771087;XP_032771088 C4b-binding protein alpha chain protein-coding 625838580 LOC116894632 serine/arginine-rich splicing factor 3-like 2 194009094 194009549 + 116894632 MODEL JAAIVD010000001 pseudo 625838581 Mmp8 matrix metallopeptidase 8 ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell differentiation (ortholog); ossification (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); brain infarction (ortholog); breast cancer (ortholog); FOUND IN extracellular space (ortholog) 8 3781693 3790685 + 22301074;30032202 116907693 MODEL JAAIVD010000027;XM_032910800 XP_032766691 neutrophil collagenase protein-coding 625838593 Esd esterase D ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); osteoarthritis (ortholog) 12 49635852 49654809 - 22301074;30032202 116913512 MODEL JAAIVD010000007;XM_032917717 XP_032773608 S-formylglutathione hydrolase protein-coding 625838606 Rapgef4 Rap guanine nucleotide exchange factor 4 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Burns (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 5 49281236 49569224 + 22301074;30032202 116901511 MODEL JAAIVD010000023;XM_032903483;XM_032903485 XP_032759374;XP_032759376 protein-coding 625838646 LOC116887693 ralA-binding protein 1-like 18 23966178 23995625 - 22301074;30032202 116887693 MODEL JAAIVD010000013;XM_032889288 XP_032745179 protein-coding 625838662 Mettl3 methyltransferase 3, N6-adenosine-methyltransferase complex catalytic subunit ENCODES a protein that exhibits mRNA binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to UV (ortholog); circadian rhythm (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Emphysema (ortholog); multiple myeloma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nuclear body (ortholog) 12 71588597 71599277 + 22301074;30032202 116913945 MODEL JAAIVD010000007;XM_032918209;XM_032918210 XP_032774100;XP_032774101 N6-adenosine-methyltransferase catalytic subunit;methyltransferase like 3 protein-coding 625838683 Zmynd15 zinc finger MYND-type containing 15 ENCODES a protein that exhibits histone deacetylase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); spermatogenic failure 14 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog) 9 50070359 50076459 + 30032202 116909678 MODEL JAAIVD010000002;XM_032913336;XM_032913337;XM_032913338 XP_032769227;XP_032769228;XP_032769229 zinc finger MYND domain-containing protein 15 protein-coding 625838706 LOC116893751 uncharacterized LOC116893751 2 26328972 26337812 - 116893751 MODEL JAAIVD010000001;XR_004387003 ncrna 625838711 Afap1l1 actin filament associated protein 1 like 1 ASSOCIATED WITH neuromuscular disease (ortholog) 15 70165440 70227496 + 30032202 116884724 MODEL JAAIVD010000010;XM_032885911;XM_032885912 XP_032741802;XP_032741803 actin filament-associated protein 1-like 1 protein-coding 625838738 Ntm neurotrimin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); connective tissue disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); excitatory synapse (ortholog) 8 24829138 25780641 - 30032202 116906853 MODEL JAAIVD010000027;XM_032909747;XM_032909748;XM_032909749 XP_032765638;XP_032765639;XP_032765640 protein-coding 625838758 Ccr8 C-C motif chemokine receptor 8 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); ASSOCIATED WITH asthma (ortholog); pulmonary fibrosis (ortholog); status epilepticus (ortholog) 8 111332033 111333094 + 22301074;30032202 116906655 MODEL JAAIVD010000027;XM_032909440 XP_032765331 C-C chemokine receptor type 8 protein-coding 625838761 Vps11 VPS11 core subunit of CORVET and HOPS complexes ENCODES a protein that exhibits protein domain specific binding (ortholog); syntaxin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN endosomal vesicle fusion (ortholog); endosome to lysosome transport (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH dystonia 32 (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 12 (ortholog); FOUND IN actin filament (ortholog); AP-3 adaptor complex (ortholog); CORVET complex (ortholog) 8 38904381 38918556 - 22301074;30032202 116906956 MODEL JAAIVD010000027;XM_032909877;XM_032909878;XM_032909879 XP_032765768;XP_032765769;XP_032765770 vacuolar protein sorting-associated protein 11 homolog protein-coding 625838790 LOC116900968 60S ribosomal protein L7a-like 1 119225709 119226473 - 116900968 MODEL JAAIVD010000025 pseudo 625838791 LOC116894137 olfactory receptor 52E4 2 104009385 104010329 + 22301074 116894137 MODEL JAAIVD010000001;XM_032895855 XP_032751746 protein-coding 625838795 Sun5 Sad1 and UNC84 domain containing 5 INVOLVED IN protein-containing complex assembly (ortholog); regulation of protein localization (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 16 (ortholog); FOUND IN nuclear inner membrane (ortholog); sperm head-tail coupling apparatus (ortholog) 5 133185739 133206122 - 30032202 116900710 MODEL JAAIVD010000023;XM_032902413;XM_032902414;XM_032902415 XP_032758304;XP_032758305;XP_032758306 SUN domain-containing protein 5 protein-coding 625838818 LOC116905028 uncharacterized LOC116905028 7 64225733 64231371 - 116905028 MODEL JAAIVD010000026;XR_004388480 ncrna 625838824 LOC116910629 U6 spliceosomal RNA 9 13663833 13663937 - 116910629 MODEL JAAIVD010000002;XR_004389168 snrna 625838827 Emid1 EMI domain containing 1 FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) 11 74081633 74127189 - 22301074 116912406 MODEL JAAIVD010000006;XM_032916466;XM_032916468 XP_032772357;XP_032772359 EMI domain-containing protein 1 protein-coding 625838848 Cln3 CLN3 lysosomal/endosomal transmembrane protein, battenin ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); glycolipid binding (ortholog); sulfatide binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); action potential (ortholog); amino acid transport (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Disease Progression (ortholog); fundus dystrophy (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); caveola (ortholog) 2 75340955 75352557 + 22301074;30032202 116891520 MODEL JAAIVD010000001;XM_032892658 XP_032748549 battenin protein-coding 625838869 LOC116912750 ATP-binding cassette sub-family G member 3-like 11 14628157 14679282 + 22301074;30032202 116912750 MODEL JAAIVD010000006;XM_032916897 XP_032772788 protein-coding 625838888 LOC116902422 uncharacterized LOC116902422 5 158000796 158002883 - 116902422 MODEL JAAIVD010000023;XR_004388070 ncrna 625838893 LOC116895719 60S ribosomal protein L17-like 3 221876298 221876863 - 116895719 MODEL JAAIVD010000012 pseudo 625838894 LOC116894507 60S ribosomal protein L23a-like 2 173234779 173235300 - 116894507 MODEL JAAIVD010000001 pseudo 625838895 LOC116911466 60S ribosomal protein L37-like 10 69781092 69781412 + 22301074;30032202 116911466 MODEL JAAIVD010000005;XM_032915445 XP_032771336 protein-coding 625838899 Avpr1b arginine vasopressin receptor 1B ENCODES a protein that exhibits identical protein binding (ortholog); peptide hormone binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN dendrite (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 10 4214511 4226088 - 22301074;30032202 116911417 MODEL JAAIVD010000005;XM_032915378 XP_032771269 vasopressin V1b receptor protein-coding 625838906 LOC116892714 ubiquitin carboxyl-terminal hydrolase 29-like 2 179149692 179155738 - 22301074;30032202 116892714 MODEL JAAIVD010000001;XM_032894580 XP_032750471 protein-coding 625838911 Zc3h7a zinc finger CCCH-type containing 7A ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog) 9 11154314 11193417 + 22301074;30032202 116908573 MODEL JAAIVD010000002;XM_032911783;XM_032911784 XP_032767674;XP_032767675 zinc finger CCCH domain-containing protein 7A protein-coding 625838941 LOC116895745 60S ribosomal protein L7-like 3 35319613 35321126 - 116895745 MODEL JAAIVD010000012 pseudo 625838942 Rbm7 RNA binding motif protein 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); pre-mRNA intronic binding (ortholog); RNA binding (ortholog); INVOLVED IN snRNA catabolic process (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 42990114 42996604 - 30032202 116906871 MODEL JAAIVD010000027;XM_032909780;XM_032909782;XM_032909783 XP_032765671;XP_032765673;XP_032765674 RNA-binding protein 7 protein-coding 625838958 LOC116898364 pescadillo homolog 4 59404012 59427816 - 116898364 MODEL JAAIVD010000003 pseudo 625838959 LOC116893653 mortality factor 4-like protein 1 2 11025403 11026130 - 30032202 116893653 MODEL JAAIVD010000001;XM_032895370 XP_032751261 protein-coding 625838963 Zbp1 Z-DNA binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); defense response to fungus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 144773566 144781390 + 22301074;30032202 116900749 MODEL JAAIVD010000023;XM_032902455 XP_032758346 Z-DNA-binding protein 1 protein-coding 625838971 LOC116889948 zinc finger protein 844-like 1 247605182 247606123 + 116889948 MODEL JAAIVD010000025;XM_032890755 XP_032746646 protein-coding 625838976 Ckap4 cytoskeleton associated protein 4 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); mitochondrion (ortholog) 1 163914425 163922720 + 30032202 116907483 MODEL JAAIVD010000025;XM_032910474 XP_032766365 cytoskeleton-associated protein 4 protein-coding 625838981 LOC116905235 disintegrin and metalloproteinase domain-containing protein 21-like 7 95631309 95633856 - 22301074;30032202 116905235 MODEL JAAIVD010000026;XM_032908060 XP_032763951 protein-coding 625838986 LOC116912103 up-regulator of cell proliferation 11 74677294 74721135 - 22301074 116912103 MODEL JAAIVD010000006;XM_032915998;XM_032915999;XM_032916000 XP_032771889;XP_032771890;XP_032771891 protein-coding 625839000 Mettl1 methyltransferase 1, tRNA methylguanosine ENCODES a protein that exhibits internal mRNA (guanine-N7-)-methyltransferase activity (ortholog); tRNA (guanine(46)-N7)-methyltransferase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); intracellular mRNA localization (ortholog); mRNA transport (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 205471714 205476052 + 22301074;30032202 116909767 MODEL JAAIVD010000025;XM_032913458;XM_032913467 XP_032769349;XP_032769358 methyltransferase like 1;tRNA (guanine-N(7)-)-methyltransferase protein-coding 625839013 Nxnl2 nucleoredoxin like 2 INVOLVED IN sensory perception of smell (ortholog); visual perception (ortholog) 14 69564480 69568818 + 30032202 116883663 MODEL JAAIVD010000009;XM_032884859 XP_032740750 nucleoredoxin-like protein 2 protein-coding 625839018 LOC116905697 high mobility group protein B1-like 1 35599558 35600199 - 116905697 MODEL JAAIVD010000025 pseudo 625839019 LOC116897546 small nucleolar RNA SNORA17 3 221235359 221235490 + 116897546 MODEL JAAIVD010000012;XR_004387560 snorna 625839022 Rnpc3 RNA binding region (RNP1, RRM) containing 3 ASSOCIATED WITH combined or isolated pituitary growth hormone deficiency 7 (ortholog); genetic disease (ortholog); isolated growth hormone deficiency (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 3 45905513 45928547 + 22301074;30032202 116896344 MODEL JAAIVD010000012;XM_032897446 XP_032753337 RNA-binding region-containing protein 3 protein-coding 625839040 Chd6 chromodomain helicase DNA binding protein 6 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH neuroblastoma (ortholog); Prostatic Neoplasms (ortholog); transitional cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog) 5 140234934 140348593 - 22301074 116902253 MODEL JAAIVD010000023;XM_032904670;XM_032904672;XM_032904673 XP_032760561;XP_032760563;XP_032760564 chromodomain-helicase-DNA-binding protein 6 protein-coding 625839085 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12105605 12105677 + 116895153 MODEL JAAIVD010000001 trna 625839086 Dnaja1 DnaJ heat shock protein family (Hsp40) member A1 ENCODES a protein that exhibits ATPase activator activity (ortholog); C3HC4-type RING finger domain binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); flagellated sperm motility (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH galactosemia (ortholog); mouth disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); microtubule cytoskeleton (ortholog) 1 117501746 117511282 - 22301074;30032202 116902591 MODEL JAAIVD010000025;XM_032905033;XM_032905034 XP_032760924;XP_032760925 dnaJ homolog subfamily A member 1 protein-coding 625839104 Tex261 testis expressed 261 INVOLVED IN positive regulation of apoptotic process (ortholog) 6 62471448 62478325 + 22301074;30032202 116903597 MODEL JAAIVD010000024;XM_032906238;XM_032906240 XP_032762129;XP_032762131 protein TEX261 protein-coding 625839116 LOC116894677 non-histone chromosomal protein HMG-17-like 1 73757660 73757987 - 116894677 MODEL JAAIVD010000025 pseudo 625839117 Defb124 defensin beta 124 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to peptidoglycan (ortholog); positive regulation of chemokine (C-C motif) ligand 5 production (ortholog) 5 131952045 131953002 - 22301074;30032202 116900702 MODEL JAAIVD010000023;XM_032902405 XP_032758296 beta-defensin 124 protein-coding 625839123 Cfap251 cilia and flagella associated protein 251 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); spermatogenic failure 18 (ortholog); spermatogenic failure 33 (ortholog); FOUND IN sperm flagellum (ortholog) 16 30524049 30593216 - 22301074;30032202 116885436 MODEL JAAIVD010000004;XM_032886720 XP_032742611 cilia- and flagella-associated protein 251 protein-coding 625839147 LOC116910294 60S ribosomal protein L15-like 9 46377449 46378070 + 116910294 MODEL JAAIVD010000002 pseudo 625839148 Mrps18c mitochondrial ribosomal protein S18C FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 11 11022860 11028879 + 22301074;30032202 116912145 MODEL JAAIVD010000006;XM_032916060 XP_032771951 28S ribosomal protein S18c, mitochondrial protein-coding 625839158 Ptpre protein tyrosine phosphatase receptor type E ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine phosphatase signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); regulation of mast cell activation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 2 66236783 66277941 - 22301074 116891379 MODEL JAAIVD010000001;XM_032892391;XM_032892392;XM_032892393 XP_032748282;XP_032748283;XP_032748284 receptor-type tyrosine-protein phosphatase epsilon protein-coding 625839189 Znf367 zinc finger protein 367 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 14 75398245 75417631 + 30032202 116883627 MODEL JAAIVD010000009;XM_032884815;XM_032884816 XP_032740706;XP_032740707 protein-coding 625839201 LOC116907428 olfactory receptor 7G2-like 8 15782681 15783653 + 22301074;30032202 116907428 MODEL JAAIVD010000027;XM_032910396 XP_032766287 protein-coding 625839206 LOC116906220 Ig heavy chain V region 186-1-like 7 121566462 121566933 - 116906220 MODEL JAAIVD010000026 pseudo 625839207 Cntln centlein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 1 68788052 69041193 - 30032202 116900547 MODEL JAAIVD010000025;XM_032902276 XP_032758167 protein-coding 625839237 Haus6 HAUS augmin like complex subunit 6 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 1 67374389 67408613 + 30032202 116900517 MODEL JAAIVD010000025;XM_032902249 XP_032758140 HAUS augmin-like complex subunit 6 protein-coding 625839258 LOC116890394 U6 spliceosomal RNA 1 54739538 54739636 + 116890394 MODEL JAAIVD010000025 pseudo 625839259 Snrk SNF related kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN nucleus (ortholog) 8 113276666 113330694 + 22301074;30032202 116907990 MODEL JAAIVD010000027;XM_032911237;XM_032911238;XM_032911239;XM_032911240;XM_032911241 XP_032767128;XP_032767129;XP_032767130;XP_032767131;XP_032767132 SNF-related serine/threonine-protein kinase protein-coding 625839279 S1pr3 sphingosine-1-phosphate receptor 3 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); inflammatory response (ortholog); negative regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; FOUND IN plasma membrane (ortholog); presynapse (ortholog) 14 69795980 69809233 + 22301074 116883824 MODEL JAAIVD010000009;XM_032885078 XP_032740969 sphingosine 1-phosphate receptor 3 protein-coding 625839285 LOC116886676 zinc finger CCCH-type antiviral protein 1-like 17 14749063 14750580 - 116886676 MODEL JAAIVD010000011 pseudo 625839286 LOC116906432 U1 spliceosomal RNA 7 68092745 68092911 - 116906432 MODEL JAAIVD010000026;XR_004388693 snrna 625839289 LOC116888132 fumarate hydratase, mitochondrial-like X 105888099 105889503 - 116888132 MODEL JAAIVD010000014 pseudo 625839290 LOC116889770 uncharacterized LOC116889770 116889770 MODEL JAAIVD010000242;XR_004386507 ncrna 625839291 Erf ETS2 repressor factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chorio-allantoic fusion (ortholog); ectodermal cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Arnold-Chiari Malformation (ortholog); brain disease (ortholog); CHITAYAT SYNDROME (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 169463375 169471826 + 22301074;30032202 116892466 MODEL JAAIVD010000001;XM_032894182 XP_032750073 ETS domain-containing transcription factor ERF protein-coding 625839299 Crtc1 CREB regulated transcription coactivator 1 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); INVOLVED IN energy homeostasis (ortholog); entrainment of circadian clock by photoperiod (ortholog); memory (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog); major depressive disorder (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 13 12639690 12695535 - 22301074;30032202 116914260 MODEL JAAIVD010000008;XM_032918472;XM_032918473 XP_032774363;XP_032774364 CREB-regulated transcription coactivator 1 protein-coding 625839320 Slc2a8 solute carrier family 2 member 8 ENCODES a protein that exhibits D-glucose binding (ortholog); D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); dehydroascorbic acid transport (ortholog); fructose transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog); synaptic vesicle (ortholog) 5 2649659 2658598 + 22301074 116901126 MODEL JAAIVD010000023;XM_032902715;XM_032902717;XM_032902718 XP_032758606;XP_032758608;XP_032758609 solute carrier family 2, facilitated glucose transporter member 8 protein-coding 625839338 LOC116903648 60S ribosomal protein L10a-like 6 156341720 156352217 + 116903648 MODEL JAAIVD010000024 pseudo 625839339 Gnat2 G protein subunit alpha transducin 2 INVOLVED IN background adaptation (ortholog); camera-type eye development (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 4 (ortholog); color blindness (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog); synapse (ortholog) 3 50156459 50166111 - 22301074;30032202 116896372 MODEL JAAIVD010000012;XM_032897492 XP_032753383 guanine nucleotide-binding protein G(t) subunit alpha-2 protein-coding 625839351 LOC116885616 40S ribosomal protein S13-like 16 18468710 18469165 + 22301074;30032202 116885616 MODEL JAAIVD010000004;XM_032886915 XP_032742806 protein-coding 625839354 LOC116907210 olfactory receptor 10G9 8 82813257 82814192 - 22301074 116907210 MODEL JAAIVD010000027;XM_032910179 XP_032766070 protein-coding 625839357 LOC116899854 small nucleolar RNA SNORA17 4 132208732 132208859 + 116899854 MODEL JAAIVD010000003;XR_004387850 snorna 625839360 Wdr88 WD repeat domain 88 2 163400860 163439947 + 22301074 116893362 MODEL JAAIVD010000001;XM_032895164 XP_032751055 WD repeat-containing protein 88 protein-coding 625839376 LOC116888134 40S ribosomal protein S29-like 1 70390687 70390857 + 116888134 MODEL JAAIVD010000025 pseudo 625839377 Krt10 keratin 10 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); protein heterodimerization activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); epidermis development (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Annular Epidermolytic Ichthyosis (ortholog); Annular Epidermolytic Ichthyosis 1 (ortholog); Arsenic Poisoning (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); keratin filament (ortholog) 9 55057397 55061912 + 30032202 116909681 MODEL JAAIVD010000002;XM_032913340 XP_032769231 keratin, type I cytoskeletal 10 protein-coding 625839389 Arhgap45 Rho GTPase activating protein 45 ASSOCIATED WITH disease of cellular proliferation (ortholog); pre-eclampsia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 154843813 154859016 - 22301074;30032202 116905444 MODEL JAAIVD010000025;XM_032908392;XM_032908400;XM_032908409 XP_032764283;XP_032764291;XP_032764300 rho GTPase-activating protein 45 protein-coding 625839421 LOC116906446 small nucleolar RNA SNORA17 7 79141286 79141414 - 116906446 MODEL JAAIVD010000026;XR_004388704 snorna 625839424 LOC116911289 60S ribosomal protein L22-like 1 223048003 223053718 + 116911289 MODEL JAAIVD010000025 pseudo 625839425 LOC116898628 RIMS-binding protein 3 4 2484697 2489921 + 22301074;30032202 116898628 MODEL JAAIVD010000003;XM_032899842 XP_032755733 protein-coding 625839429 LOC116883985 zinc finger CCCH domain-containing protein 15-like 14 41574536 41575821 - 22301074;30032202 116883985 MODEL JAAIVD010000009;XM_032885220 XP_032741111 protein-coding 625839433 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60869111 60869183 - 116897687 MODEL JAAIVD010000012 trna 625839434 LOC116903314 heat shock cognate 71 kDa protein-like 6 24931086 24933199 + 22301074;30032202 116903314 MODEL JAAIVD010000024;XM_032905749 XP_032761640 protein-coding 625839439 Proc protein C, inactivator of coagulation factors Va and VIIIa ENCODES a protein that exhibits identical protein binding (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN liver development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 15 12095696 12107547 + 22301074;30032202 116884558 MODEL JAAIVD010000010;XM_032885699 XP_032741590 vitamin K-dependent protein C protein-coding 625839452 Wrnip1 WRN helicase interacting protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN DNA synthesis involved in DNA repair (ortholog); regulation of DNA-templated DNA replication initiation (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 14 51834756 51854732 + 22301074;30032202 116883447 MODEL JAAIVD010000009;XM_032884594 XP_032740485 ATPase WRNIP1 protein-coding 625839463 Zdhhc9 zDHHC palmitoyltransferase 9 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); Ras palmitoyltransferase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); ERAD pathway (ortholog); host-mediated activation of viral process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) X 110201898 110237261 + 30032202 116888429 MODEL JAAIVD010000014;XM_032889704;XM_032889705 XP_032745595;XP_032745596 palmitoyltransferase ZDHHC9;zinc finger DHHC-type palmitoyltransferase 9 protein-coding 625839480 LOC116912713 cytochrome c oxidase subunit 7B2, mitochondrial INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 11 28271362 28339542 - 22301074;30032202 116912713 MODEL JAAIVD010000006;XM_032916840 XP_032772731 protein-coding 625839486 LOC116914951 ral guanine nucleotide dissociation stimulator-like 13 11833341 11835370 + 116914951 MODEL JAAIVD010000008 pseudo 625839487 LOC116889039 uncharacterized LOC116889039 X 19888501 19890783 + 30032202 116889039 MODEL JAAIVD010000014;XM_032890234 XP_032746125 uncharacterized protein LOC116889039 protein-coding 625839491 LOC116893499 vomeronasal type-2 receptor 116-like 2 184934201 184947781 + 116893499 MODEL JAAIVD010000001 pseudo 625839492 LOC116902998 KH homology domain-containing protein 1-like 6 102115549 102115965 - 22301074;30032202 116902998 MODEL JAAIVD010000024;XM_032905311 XP_032761202 protein-coding 625839495 Pitpnm1 phosphatidylinositol transfer protein membrane associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN phospholipid transport (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog) 2 3528061 3541694 - 22301074;30032202 116890788 MODEL JAAIVD010000001;XM_032891259;XM_032891260;XM_032891261 XP_032747150;XP_032747151;XP_032747152 membrane-associated phosphatidylinositol transfer protein 1 protein-coding 625839527 LOC116899146 obg-like ATPase 1 1 102992142 102992923 + 116899146 MODEL JAAIVD010000025 pseudo 625839528 LOC116896080 60S ribosomal protein L19-like 3 214124629 214129420 - 116896080 MODEL JAAIVD010000012 pseudo 625839529 Kdr kinase insert domain receptor ENCODES a protein that exhibits cadherin binding (ortholog); coreceptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN blood vessel endothelial cell differentiation (ortholog); branching involved in blood vessel morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adhesions of uterus (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cell surface (ortholog) 11 32697838 32740235 - 22301074;30032202 116912596 MODEL JAAIVD010000006;XM_032916717 XP_032772608 vascular endothelial growth factor receptor 2 protein-coding 625839563 Vgll4 vestigial like family member 4 INVOLVED IN negative regulation of cardiac muscle cell proliferation (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 6 31736278 31807142 + 30032202 116903391 MODEL JAAIVD010000024;XM_032905888;XM_032905889 XP_032761779;XP_032761780 transcription cofactor vestigial-like protein 4 protein-coding 625839575 LOC116889646 adenosine kinase-like 22301074 116889646 MODEL JAAIVD010000041;XM_032890551 XP_032746442 protein-coding 625839576 LOC116892947 zinc finger protein 260-like 1 13038316 13066957 + 30032202 116892947 MODEL JAAIVD010000025;XM_032894900 XP_032750791 protein-coding 625839583 LOC116884601 O-acyltransferase like protein 15 65520889 65573190 - 22301074 116884601 MODEL JAAIVD010000010;XM_032885741 XP_032741632 protein-coding 625839602 LOC116909550 uncharacterized LOC116909550 9 41845950 41852387 - 116909550 MODEL JAAIVD010000002;XR_004389080 ncrna 625839607 Dsg3 desmoglein 3 ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN actin filament organization (ortholog); adherens junction assembly (ortholog); desmosome assembly (ortholog); ASSOCIATED WITH BLISTERING, ACANTHOLYTIC, OF ORAL AND LARYNGEAL MUCOSA (ortholog); pemphigus vulgaris (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 15 23114486 23144874 - 22301074;30032202 116884544 MODEL JAAIVD010000010;XM_032885681;XM_032885682 XP_032741572;XP_032741573 desmoglein-3 protein-coding 625839629 LOC116899964 E3 SUMO-protein ligase PIAS2-like 5 71813090 71814189 + 116899964 MODEL JAAIVD010000023 pseudo 625839630 LOC116898270 olfactory receptor 6B2-like 4 164456220 164457155 - 22301074 116898270 MODEL JAAIVD010000003;XM_032899622 XP_032755513 protein-coding 625839633 Ccdc106 coiled-coil domain containing 106 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 177634911 177639499 + 30032202 116892685 MODEL JAAIVD010000001;XM_032894534;XM_032894535;XM_032894536;XM_032894537;XM_032894538;XM_032894539;XM_032894540;XM_032894541 XP_032750425;XP_032750426;XP_032750427;XP_032750428;XP_032750429;XP_032750430;XP_032750431;XP_032750432 coiled-coil domain-containing protein 106 protein-coding 625839664 LOC116889307 synaptobrevin homolog YKT6-like X 38438930 38439496 + 116889307 MODEL JAAIVD010000014 pseudo 625839665 LOC116913170 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 12 51935629 51936128 - 116913170 MODEL JAAIVD010000007 pseudo 625839666 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41781488 41781559 + 116884217 MODEL JAAIVD010000009 trna 625839667 LOC116904650 U6 spliceosomal RNA 6 15711326 15711431 - 116904650 MODEL JAAIVD010000024;XR_004388353 snrna 625839670 Irak2 interleukin 1 receptor associated kinase 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway 6 32841469 32898597 - 22301074;30032202 116903401 MODEL JAAIVD010000024;XM_032905912 XP_032761803 interleukin-1 receptor-associated kinase-like 2 protein-coding 625839687 LOC116888070 transformer-2 protein homolog beta-like X 89041694 89042403 - 116888070 MODEL JAAIVD010000014 pseudo 625839688 LOC116910902 platelet-activating factor acetylhydrolase IB subunit gamma-like 10 47254347 47254971 - 116910902 MODEL JAAIVD010000005 pseudo 625839689 LOC116911033 uncharacterized LOC116911033 10 40326378 40327893 + 116911033 MODEL JAAIVD010000005;XR_004389303;XR_004389304;XR_004389305 ncrna 625839699 Ccdc14 coiled-coil domain containing 14 INVOLVED IN protein localization to centrosome (ortholog); substantia nigra development (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 19470240 19504658 + 30032202 116898801 MODEL JAAIVD010000003;XM_032900151 XP_032756042 coiled-coil domain-containing protein 14 protein-coding 625839716 Tmbim4 transmembrane BAX inhibitor motif containing 4 INVOLVED IN locomotory behavior (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) 1 198185541 198200747 + 30032202 116909427 MODEL JAAIVD010000025;XM_032913005 XP_032768896 protein lifeguard 4 protein-coding 625839727 Spata45 spermatogenesis associated 45 10 69124863 69130624 + 116911504 MODEL JAAIVD010000005;XM_032915491 XP_032771382 spermatogenesis-associated protein 45 protein-coding 625839734 LOC116898926 programmed cell death protein 7-like 4 46421884 46427000 + 116898926 MODEL JAAIVD010000003 pseudo 625839735 Tacc2 transforming acidic coiled-coil containing protein 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 71320382 71511691 - 30032202 116891420 MODEL JAAIVD010000001;XM_032892446;XM_032892447;XM_032892449;XM_032892450;XM_032892451;XM_032892452;XM_032892453;XM_032892454;XM_032892455 XP_032748337;XP_032748338;XP_032748340;XP_032748341;XP_032748342;XP_032748343;XP_032748344;XP_032748345;XP_032748346 transforming acidic coiled-coil-containing protein 2 protein-coding 625839782 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 110176329 110176400 - 116904859 MODEL JAAIVD010000024 trna 625839783 LOC116897394 U6 spliceosomal RNA 3 52052864 52052970 + 116897394 MODEL JAAIVD010000012;XR_004387438 snrna 625839786 Ube2f ubiquitin conjugating enzyme E2 F (putative) ENCODES a protein that exhibits NEDD8 conjugating enzyme activity (ortholog); NEDD8 transferase activity (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog) 4 163251524 163286835 + 30032202 116899635 MODEL JAAIVD010000003;XM_032901623;XM_032901624;XM_032901626;XM_032901627 XP_032757514;XP_032757515;XP_032757517;XP_032757518 NEDD8-conjugating enzyme UBE2F protein-coding 625839807 LOC116903436 regenerating islet-derived protein 3-gamma 6 37614872 37617146 - 30032202 116903436 MODEL JAAIVD010000024;XM_032905989 XP_032761880 protein-coding 625839816 Mcts1 MCTS1 re-initiation and release factor ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); RNA cap binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 118 (ortholog); FOUND IN cytoplasm (ortholog) X 101771315 101781386 - 22301074;30032202 116889394 MODEL JAAIVD010000014;XM_032890496;XM_032890497;XM_032890498 XP_032746387;XP_032746388;XP_032746389 malignant T-cell-amplified sequence 1 protein-coding 625839832 Nhej1 non-homologous end joining factor 1 ENCODES a protein that exhibits DNA end binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); double-strand break repair via nonhomologous end joining (ortholog); immunoglobulin V(D)J recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH choroid disease (ortholog); genetic disease (ortholog); Microphthalmia/Coloboma 13 (ortholog); FOUND IN DNA-dependent protein kinase-DNA ligase 4 complex (ortholog); fibrillar center (ortholog); nonhomologous end joining complex (ortholog) 4 148387911 148485324 - 22301074;30032202 116899520 MODEL JAAIVD010000003;XM_032901378 XP_032757269 non-homologous end-joining factor 1 protein-coding 625839845 Gtf3c2 general transcription factor IIIC subunit 2 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); transcription factor TFIIIC complex (ortholog) 7 22906713 22931044 + 22301074;30032202 116905981 MODEL JAAIVD010000026;XM_032908992;XM_032908993;XM_032908995;XM_032908996;XM_032908997;XM_032908998 XP_032764883;XP_032764884;XP_032764886;XP_032764887;XP_032764888;XP_032764889 general transcription factor 3C polypeptide 2 protein-coding 625839881 LOC116905884 60S ribosomal protein L19-like 7 117639237 117639773 - 22301074;30032202 116905884 MODEL JAAIVD010000026;XM_032908874 XP_032764765 protein-coding 625839884 LOC116892566 destrin-like 2 171813334 171813856 - 116892566 MODEL JAAIVD010000001 pseudo 625839885 LOC116889876 40S ribosomal protein S15-like 1 156008438 156008844 - 22301074;30032202 116889876 MODEL JAAIVD010000025;XM_032890701 XP_032746592 protein-coding 625839890 LOC116894387 olfactory receptor 13A1-like 2 156836658 156837608 - 22301074 116894387 MODEL JAAIVD010000001;XM_032896093 XP_032751984 protein-coding 625839894 LOC116890575 small nucleolar RNA SNORA17 1 102020108 102020232 + 116890575 MODEL JAAIVD010000025 pseudo 625839895 Trim37 tripartite motif containing 37 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aggresome assembly (ortholog); negative regulation of centriole replication (ortholog); negative regulation of gene expression, epigenetic (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Dwarfism (ortholog); Fibrous Dysplasia of Bone (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 83519659 83661336 - 22301074;30032202 116908620 MODEL JAAIVD010000002;XM_032911859;XM_032911860;XM_032911861;XM_032911862;XM_032911863;XM_032911865;XM_032911866;XM_032911867;XR_004389001;XR_004389002;XR_004389003 XP_032767750;XP_032767751;XP_032767752;XP_032767753;XP_032767754;XP_032767756;XP_032767757;XP_032767758 E3 ubiquitin-protein ligase TRIM37 protein-coding 625839954 LOC116894511 vomeronasal type-1 receptor 4-like 2 173785320 173786267 - 22301074;30032202 116894511 MODEL JAAIVD010000001;XM_032896213 XP_032752104 protein-coding 625839957 LOC116911266 60S ribosomal protein L17-like 10 56694237 56694853 - 22301074;30032202 116911266 MODEL JAAIVD010000005;XM_032915172 XP_032771063 protein-coding 625839962 Gpr84 G protein-coupled receptor 84 FOUND IN receptor complex (ortholog) 1 259772899 259775045 + 22301074;30032202 116890184 MODEL JAAIVD010000025;XM_032890919;XM_032890920 XP_032746810;XP_032746811 G-protein coupled receptor 84 protein-coding 625839971 LOC116894905 small nucleolar RNA SNORA73 family 2 108475893 108476019 + 116894905 MODEL JAAIVD010000001;XR_004387107 snorna 625839974 LOC116911508 olfactory receptor 6K3-like 10 52810713 52811669 + 22301074 116911508 MODEL JAAIVD010000005;XM_032915495 XP_032771386 protein-coding 625839978 LOC116893711 olfactory receptor 5B3-like 2 13422892 13423809 + 22301074;30032202 116893711 MODEL JAAIVD010000001;XM_032895428 XP_032751319 protein-coding 625839982 LOC116900296 olfactory receptor 8K3-like 5 63678915 63679856 - 22301074;30032202 116900296 MODEL JAAIVD010000023;XM_032902051 XP_032757942 protein-coding 625839985 Cdkn2aip CDKN2A interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of cell growth (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN granular component (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 13 40313005 40318232 + 30032202 116914551 MODEL JAAIVD010000008;XM_032918900;XM_032918901 XP_032774791;XP_032774792 CDKN2A-interacting protein protein-coding 625839997 Camk2a calcium/calmodulin dependent protein kinase II alpha ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); calcium ion transport (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); dendrite (ortholog) 15 70959958 71023712 - 22301074;30032202 116884968 MODEL JAAIVD010000010;XM_032886176 XP_032742067 calcium/calmodulin-dependent protein kinase type II subunit alpha protein-coding 625840019 LOC116889315 mitochondrial intermembrane space import and assembly protein 40-like X 51885896 51886756 + 30032202 116889315 MODEL JAAIVD010000014;XM_032890441 XP_032746332 protein-coding 625840022 LOC116904305 60S ribosomal protein L23a-like 6 49513352 49520018 + 116904305 MODEL JAAIVD010000024 pseudo 625840023 LOC116907017 baculoviral IAP repeat-containing protein 3 8 4048952 4076232 - 22301074;30032202 116907017 MODEL JAAIVD010000027;XM_032909952;XM_032909953;XM_032909954;XM_032909955 XP_032765843;XP_032765844;XP_032765845;XP_032765846 protein-coding 625840045 LOC116899551 cytochrome c, somatic-like 4 152811271 152813150 - 116899551 MODEL JAAIVD010000003 pseudo 625840046 LOC116914167 U6 spliceosomal RNA 12 38494729 38494835 - 116914167 MODEL JAAIVD010000007;XR_004389712 snrna 625840049 Psmb7 proteasome 20S subunit beta 7 ASSOCIATED WITH atrial fibrillation (ortholog); coat/hair pigmentation trait (ortholog); COVID-19 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 16358787 16417261 - 22301074 116901366 MODEL JAAIVD010000023;XM_032903228 XP_032759119 proteasome subunit beta type-7 protein-coding 625840061 LOC116898075 uncharacterized protein C9orf40 homolog 4 90359407 90359901 - 116898075 MODEL JAAIVD010000003 pseudo 625840062 Eps15 epidermal growth factor receptor pathway substrate 15 ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytic recycling (ortholog); Golgi to endosome transport (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; Notch signaling pathway; FOUND IN aggresome (ortholog); AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog) 1 45472958 45572794 - 22301074;30032202 116898979 MODEL JAAIVD010000025;XM_032900408 XP_032756299 epidermal growth factor receptor substrate 15 protein-coding 625840091 LOC116883697 probable G-protein coupled receptor 141 14 38482029 38482928 - 22301074;30032202 116883697 MODEL JAAIVD010000009;XM_032884910 XP_032740801 protein-coding 625840094 LOC116905092 60S ribosomal protein L21-like 7 124050876 124051356 - 116905092 MODEL JAAIVD010000026 pseudo 625840095 LOC116908344 U7 small nuclear RNA 8 44744954 44745013 - 116908344 MODEL JAAIVD010000027;XR_004388895 snrna 625840098 LOC116894861 U6 spliceosomal RNA 2 206548532 206548638 + 116894861 MODEL JAAIVD010000001;XR_004387075 snrna 625840101 LOC116900591 high mobility group protein B4-like 5 94595334 94595880 + 116900591 MODEL JAAIVD010000023 pseudo 625840102 LOC116883308 olfactory receptor 14A16-like 14 74504383 74505330 - 22301074;30032202 116883308 MODEL JAAIVD010000009;XM_032884362 XP_032740253 protein-coding 625840105 LOC116898697 EEF1AKMT4-ECE2 readthrough transcript protein ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN peptide hormone processing (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) 4 5436309 5472018 + 22301074;30032202 116898697 MODEL JAAIVD010000003;XM_032899959;XM_032899961 XP_032755850;XP_032755852 EEF1A lysine methyltransferase 4 protein-coding 625840131 LOC116904607 murinoglobulin-1 6 24959100 25009014 - 22301074;30032202 116904607 MODEL JAAIVD010000024;XM_032907403 XP_032763294 protein-coding 625840171 LOC116902349 protein BEX4-like 1 128521382 128571879 + 30032202 116902349 MODEL JAAIVD010000025;XM_032904877 XP_032760768 protein-coding 625840175 LOC116900373 olfactory receptor 5W2-like 5 69481677 69482624 + 22301074;30032202 116900373 MODEL JAAIVD010000023;XM_032902121 XP_032758012 protein-coding 625840179 LOC116892791 vomeronasal type-2 receptor 116-like 2 186155197 186164637 + 116892791 MODEL JAAIVD010000001 pseudo 625840180 LOC116906019 transcription factor BTF3-like 7 24303492 24303973 - 116906019 MODEL JAAIVD010000026 pseudo 625840181 Grin2b glutamate ionotropic receptor NMDA type subunit 2B ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium channel activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN action potential (ortholog); associative learning (ortholog); auditory behavior (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); astigmatism (ortholog); FOUND IN apical dendrite (ortholog); cell surface (ortholog); cytoplasm (ortholog) 6 13267567 13771078 + 22301074;30032202 116903157 MODEL JAAIVD010000024;XM_032905523;XM_032905524;XM_032905525 XP_032761414;XP_032761415;XP_032761416 glutamate receptor ionotropic, NMDA 2B protein-coding 625840205 Npc1 NPC intracellular cholesterol transporter 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN adult walking behavior (ortholog); autophagy (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); atherosclerosis (ortholog); brucellosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome (ortholog); extracellular region (ortholog) 15 31427147 31471931 + 22301074 116884258 MODEL JAAIVD010000010;XM_032885343 XP_032741234 protein-coding 625840234 LOC116898471 RCC1 and BTB domain-containing protein 1-like 4 110792543 110808683 + 116898471 MODEL JAAIVD010000003 pseudo 625840235 Appbp2 amyloid beta precursor protein binding protein 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of beige fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle membrane (ortholog); nucleoplasm (ortholog) 9 85487662 85527624 + 22301074;30032202 116908562 MODEL JAAIVD010000002;XM_032911766 XP_032767657 amyloid protein-binding protein 2 protein-coding 625840252 LOC116895721 ATP synthase F(0) complex subunit C2, mitochondrial-like 3 222624104 222624700 - 22301074;30032202 116895721 MODEL JAAIVD010000012;XM_032896904 XP_032752795 protein-coding 625840257 Kbtbd4 kelch repeat and BTB domain containing 4 5 65076257 65082332 + 22301074 116901602 MODEL JAAIVD010000023;XM_032903628;XM_032903629;XM_032903630 XP_032759519;XP_032759520;XP_032759521 kelch repeat and BTB domain-containing protein 4 protein-coding 625840271 Syne2 spectrin repeat containing nuclear envelope protein 2 ENCODES a protein that exhibits actin binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN centrosome localization (ortholog); establishment or maintenance of cell polarity (ortholog); fibroblast migration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant Emery-Dreifuss muscular dystrophy 2 (ortholog); autosomal dominant Emery-Dreifuss muscular dystrophy 5 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); fibrillar center (ortholog) 7 90016791 90284940 + 22301074 116905176 MODEL JAAIVD010000026;XM_032907953;XM_032907954 XP_032763844;XP_032763845 nesprin-2 protein-coding 625840395 LOC116886644 cytosolic purine 5'-nucleotidase-like 17 20601014 20603870 + 116886644 MODEL JAAIVD010000011 pseudo 625840396 Cdc45 cell division cycle 45 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH androgen insensitivity syndrome (ortholog); Androgen Insensitivity Syndrome due to Coactivator Deficiency (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); CMG complex (ortholog) 4 4049378 4074361 - 22301074;30032202 116898677 MODEL JAAIVD010000003;XM_032899928 XP_032755819 cell division control protein 45 homolog protein-coding 625840419 LOC116885994 small nucleolar RNA SNORD102 16 7056749 7056819 - 116885994 MODEL JAAIVD010000004;XR_004386067 snorna 625840422 Chpt1 choline phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); platelet activating factor biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 167524589 167579338 - 30032202 116907758 MODEL JAAIVD010000025;XM_032910900;XM_032910907;XM_032910915;XR_004388844 XP_032766791;XP_032766798;XP_032766806 cholinephosphotransferase 1 protein-coding 625840445 Pi4k2a phosphatidylinositol 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); AP-3 adaptor complex binding (ortholog); ATP binding (ortholog); INVOLVED IN basophil degranulation (ortholog); phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPERKINETIC MOVEMENTS, SEIZURES, AND STRUCTURAL BRAIN ABNORMALITIES (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) 2 41205864 41233909 + 30032202 116891174 MODEL JAAIVD010000001;XM_032891988 XP_032747879 phosphatidylinositol 4-kinase type 2-alpha protein-coding 625840458 Cacna1e calcium voltage-gated channel subunit alpha1 E ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Coma (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 69 (ortholog); FOUND IN GABA-ergic synapse (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) 10 33842224 34146488 - 22301074;30032202 116910875 MODEL JAAIVD010000005;XM_032914632;XM_032914633;XM_032914634;XM_032914635;XM_032914636;XM_032914637;XM_032914638;XM_032914640 XP_032770523;XP_032770524;XP_032770525;XP_032770526;XP_032770527;XP_032770528;XP_032770529;XP_032770531 voltage-dependent R-type calcium channel subunit alpha-1E protein-coding 625840523 LOC116899397 uncharacterized LOC116899397 4 130285563 130310492 + 116899397 MODEL JAAIVD010000003;XR_004387727 ncrna 625840528 LOC116894066 GTPase NRas-like 2 102893694 102894391 - 116894066 MODEL JAAIVD010000001 pseudo 625840529 Glipr1l2 GLIPR1 like 2 1 190234684 190264155 - 30032202 116890011 MODEL JAAIVD010000025;XM_032890795;XM_032890796 XP_032746686;XP_032746687 GLIPR1-like protein 2 protein-coding 625840542 Sec63 SEC63 homolog, protein translocation regulator INVOLVED IN liver development (ortholog); nitrogen cycle metabolic process (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 2 (ortholog); genetic disease (ortholog); Glanzmann Thrombasthenia 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 18 42469585 42537977 + 30032202 116886818 MODEL JAAIVD010000013;XM_032888245;XM_032888246 XP_032744136;XP_032744137 translocation protein SEC63 homolog protein-coding 625840569 Ttll6 tubulin tyrosine ligase like 6 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule bundle formation (ortholog); microtubule severing (ortholog); positive regulation of cilium movement (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog); cilium (ortholog) 9 58215890 58250209 - 30032202 116910091 MODEL JAAIVD010000002;XM_032913916 XP_032769807 tubulin polyglutamylase TTLL6 protein-coding 625840589 LOC116914559 uncharacterized LOC116914559 13 2173698 2182310 - 116914559 MODEL JAAIVD010000008;XM_032918912 XP_032774803 uncharacterized protein LOC116914559 protein-coding 625840595 Etaa1 ETAA1 activator of ATR kinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); G2/M transition of mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN cytosol (ortholog); nuclear replication fork (ortholog); nuclear speck (ortholog) 11 86322721 86337233 - 116912483 MODEL JAAIVD010000006;XM_032916549;XM_032916550 XP_032772440;XP_032772441 ewing's tumor-associated antigen 1 protein-coding 625840609 LOC116901770 protein NipSnap homolog 3B 1 96798040 96806931 + 30032202 116901770 MODEL JAAIVD010000025;XM_032903912 XP_032759803 protein-coding 625840619 LOC116900397 olfactory receptor 4C11-like 5 69938502 69941439 + 22301074 116900397 MODEL JAAIVD010000023;XM_032902143;XM_032902144 XP_032758034;XP_032758035 protein-coding 625840625 Nicol1 NELL2 interacting cell ontogeny regulator 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); spermatogenesis (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 11 70884469 70886079 - 116912597 MODEL JAAIVD010000006;XM_032916718;XM_032916719 XP_032772609;XP_032772610 C11H4orf48 chromosome 11 C4orf48 homolog;neuropeptide-like protein C4orf48 homolog protein-coding 625840636 Arpin actin related protein 2/3 complex inhibitor INVOLVED IN directional locomotion (ortholog); negative regulation of actin nucleation (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN lamellipodium (ortholog) 2 120316868 120325130 + 22301074;30032202 116891933 MODEL JAAIVD010000001;XM_032893373 XP_032749264 protein-coding 625840646 LOC116910203 olfactory receptor 3A1 9 93045142 93046089 - 22301074;30032202 116910203 MODEL JAAIVD010000002;XM_032914066 XP_032769957 protein-coding 625840649 Laptm4a lysosomal protein transmembrane 4 alpha FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 7 29167234 29185133 + 30032202 116904862 MODEL JAAIVD010000026;XM_032907453 XP_032763344 lysosomal-associated transmembrane protein 4A protein-coding 625840660 Lyrm9 LYR motif containing 9 ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 9 91603215 91616581 - 116909998 MODEL JAAIVD010000002;XM_032913783;XM_032913784 XP_032769674;XP_032769675 LYR motif-containing protein 9 protein-coding 625840672 Bace2 beta-secretase 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN astrocyte activation (ortholog); glucose homeostasis (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); frontotemporal dementia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN dense core granule (ortholog); Golgi apparatus (ortholog); melanosome membrane (ortholog) 4 47136476 47218535 - 22301074;30032202 116898941 MODEL JAAIVD010000003;XM_032900357 XP_032756248 protein-coding 625840685 Fes FES proto-oncogene, tyrosine kinase ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); microtubule binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to vitamin D (ortholog); centrosome cycle (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH coronary artery disease (ortholog); esophagus squamous cell carcinoma (ortholog); female breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) 2 119857126 119866284 + 22301074;30032202 116891917 MODEL JAAIVD010000001;XM_032893341 XP_032749232 tyrosine-protein kinase Fes/Fps protein-coding 625840708 Vav2 vav guanine nucleotide exchange factor 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cell migration (ortholog); cell projection assembly (ortholog); lamellipodium assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 5 9232935 9401315 + 22301074;30032202 116901240 MODEL JAAIVD010000023;XM_032902989;XM_032902990;XM_032902991 XP_032758880;XP_032758881;XP_032758882 guanine nucleotide exchange factor VAV2 protein-coding 625840744 LOC116902567 small nucleolar RNA SNORA48 5 129022023 129022165 + 116902567 MODEL JAAIVD010000023;XR_004388163 snorna 625840747 Trnar-gcg transfer RNA arginine (anticodon GCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889723 MODEL JAAIVD010000061 trna 625840748 Klhdc8b kelch domain containing 8B INVOLVED IN mitotic cytokinetic process (ortholog); mitotic nuclear division (ortholog); nuclear chromosome segregation (ortholog); ASSOCIATED WITH Hodgkin's lymphoma (ortholog); FOUND IN cellularization cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 99776235 99781180 - 22301074 116907588 MODEL JAAIVD010000027;XM_032910629 XP_032766520 kelch domain-containing protein 8B protein-coding 625840758 Msl1 MSL complex subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN MSL complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 9 55631308 55640839 - 30032202 116908808 MODEL JAAIVD010000002;XM_032912213;XM_032912214 XP_032768104;XP_032768105 male-specific lethal 1 homolog protein-coding 625840772 Cblc Cbl proto-oncogene C ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron apoptotic process (ortholog) 2 170819082 170834454 + 22301074;30032202 116892521 MODEL JAAIVD010000001;XM_032894276 XP_032750167 E3 ubiquitin-protein ligase CBL-C protein-coding 625840785 LOC116899844 small nucleolar RNA SNORA17 4 41961077 41961209 - 116899844 MODEL JAAIVD010000003;XR_004387841 snorna 625840788 LOC116910681 U1 spliceosomal RNA 9 42633397 42633557 - 116910681 MODEL JAAIVD010000002;XR_004389212 snrna 625840791 Abcc8 ATP binding cassette subfamily C member 8 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to nutrient levels (ortholog); female pregnancy (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); brain edema (ortholog); Brain Injuries (ortholog); FOUND IN inward rectifying potassium channel (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) 2 153324398 153405223 + 22301074;30032202 116892109 MODEL JAAIVD010000001;XM_032893587;XM_032893588 XP_032749478;XP_032749479 ATP-binding cassette sub-family C member 8 protein-coding 625840837 LOC116896611 ATP synthase F(0) complex subunit C2, mitochondrial-like 1 83613362 83624422 - 116896611 MODEL JAAIVD010000025 pseudo 625840838 LOC116888505 uncharacterized LOC116888505 X 18070689 18087260 - 116888505 MODEL JAAIVD010000014;XM_032889797;XM_032889798 XP_032745688;XP_032745689 uncharacterized protein LOC116888505 protein-coding 625840850 LOC116896176 sorting nexin-6-like 3 14913910 14915488 + 22301074;30032202 116896176 MODEL JAAIVD010000012;XM_032897214 XP_032753105 protein-coding 625840855 LOC116883677 spermatogenesis-associated protein 31D3-like 14 78397680 78403565 + 116883677 MODEL JAAIVD010000009;XM_032884886 XP_032740777 protein-coding 625840863 LOC116899652 uncharacterized LOC116899652 4 164909491 164910491 - 116899652 MODEL JAAIVD010000003;XR_004387747 ncrna 625840867 LOC116900447 olfactory receptor 4C15-like 5 70973969 70974904 - 22301074 116900447 MODEL JAAIVD010000023;XM_032902188 XP_032758079 protein-coding 625840870 Rs1 retinoschisin 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN protein homooligomerization (ortholog); retina layer formation (ortholog); visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinoschisis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) X 32127270 32156640 + 116888304 MODEL JAAIVD010000014;XM_032889578 XP_032745469 retinoschisin protein-coding 625840879 Arl3 ARF like GTPase 3 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi to plasma membrane transport (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 45999920 46045153 - 22301074;30032202 116891252 MODEL JAAIVD010000001;XM_032892132 XP_032748023 ADP ribosylation factor like GTPase 3;ADP-ribosylation factor-like protein 3 protein-coding 625840889 LOC116904255 uncharacterized protein C9orf85 homolog 6 29668868 29669106 - 116904255 MODEL JAAIVD010000024 pseudo 625840890 LOC116887734 small nucleolar RNA SNORA17 18 15035258 15035381 - 116887734 MODEL JAAIVD010000013 pseudo 625840891 Rspo3 R-spondin 3 ENCODES a protein that exhibits frizzled binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog) 5 5580500 5617681 - 116900001 MODEL JAAIVD010000023;XM_032901806 XP_032757697 R-spondin-3 protein-coding 625840898 LOC116887733 small nucleolar RNA SNORA17 18 40928920 40929053 + 116887733 MODEL JAAIVD010000013;XR_004386245 snorna 625840901 Kctd8 potassium channel tetramerization domain containing 8 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynapse (ortholog); presynaptic active zone membrane (ortholog); presynaptic membrane (ortholog) 11 26170394 26406463 - 22301074;30032202 116912140 MODEL JAAIVD010000006;XM_032916054 XP_032771945 BTB/POZ domain-containing protein KCTD8 protein-coding 625840907 LOC116887807 small nuclear ribonucleoprotein G-like X 82292937 82293092 + 30032202 116887807 MODEL JAAIVD010000014;XM_032889332 XP_032745223 protein-coding 625840910 Dusp8 dual specificity phosphatase 8 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway 2 7424047 7440622 + 22301074;30032202 116890850 MODEL JAAIVD010000001;XM_032891391;XM_032891392 XP_032747282;XP_032747283 dual specificity protein phosphatase 8 protein-coding 625840924 LOC116900738 stress-70 protein, mitochondrial-like 5 141994041 141996094 + 116900738 MODEL JAAIVD010000023 pseudo 625840925 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92643699 92643770 + 116904830 MODEL JAAIVD010000024 trna 625840926 Spred1 sprouty related EVH1 domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH Cafe-au-Lait Spots (ortholog); Costello syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 5 95268323 95332960 + 22301074;30032202 116901771 MODEL JAAIVD010000023;XM_032903911 XP_032759802 sprouty-related, EVH1 domain-containing protein 1 protein-coding 625840937 Krt12 keratin 12 INVOLVED IN cornea development in camera-type eye (ortholog); epithelium development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); genetic disease (ortholog); Meesmann corneal dystrophy (ortholog) 9 55022332 55029363 + 22301074;30032202 116908916 MODEL JAAIVD010000002;XM_032912372 XP_032768263 keratin, type I cytoskeletal 12 protein-coding 625840949 Pecam1 platelet and endothelial cell adhesion molecule 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN angiogenesis (ortholog); bicellular tight junction assembly (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) 9 72417008 72476718 + 30032202 116909861 MODEL JAAIVD010000002;XM_032913587 XP_032769478 platelet endothelial cell adhesion molecule protein-coding 625840969 Cct8l2 chaperonin containing TCP1 subunit 8 like 2 6 154695698 154697778 + 22301074;30032202 116903020 MODEL JAAIVD010000024;XM_032905333 XP_032761224 T-complex protein 1 subunit theta-like 2 protein-coding 625840974 LOC116911519 olfactory receptor 6K3-like 10 52840454 52841401 + 22301074 116911519 MODEL JAAIVD010000005;XM_032915512 XP_032771403 protein-coding 625840977 LOC116893391 interferon alpha-C-like 1 65584241 65584822 + 22301074;30032202 116893391 MODEL JAAIVD010000025;XM_032895203 XP_032751094 protein-coding 625840980 LOC116909564 olfactory receptor 1361-like 9 38640844 38641785 - 22301074;30032202 116909564 MODEL JAAIVD010000002;XM_032913183 XP_032769074 protein-coding 625840983 Klhl10 kelch like family member 10 INVOLVED IN cell morphogenesis (ortholog); fertilization (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH spermatogenic failure 11 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog) 9 59745304 59761659 + 22301074 116910621 MODEL JAAIVD010000002;XM_032914570 XP_032770461 kelch-like protein 10 protein-coding 625840992 LOC116903005 vomeronasal type-1 receptor 95 6 146637570 146638514 - 22301074;30032202 116903005 MODEL JAAIVD010000024;XM_032905317 XP_032761208 protein-coding 625840995 Cnbd1 cyclic nucleotide binding domain containing 1 1 124506434 124827286 + 116889224 MODEL JAAIVD010000025;XM_032890379 XP_032746270 cyclic nucleotide-binding domain-containing protein 1 protein-coding 625841010 Zmynd8 zinc finger MYND-type containing 8 ENCODES a protein that exhibits histone H3K14ac reader activity (ortholog); histone H3K4me1 reader activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); modulation of excitatory postsynaptic potential (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) 5 152079713 152182971 + 22301074 116902328 MODEL JAAIVD010000023;XM_032904782;XM_032904783;XM_032904784;XM_032904785;XM_032904786;XM_032904787;XM_032904788;XM_032904790;XM_032904791;XM_032904792;XM_032904793;XM_032904794;XM_032904795;XM_032904796;XM_032904797;XM_032904798;XM_032904799;XM_032904800 XP_032760673;XP_032760674;XP_032760675;XP_032760676;XP_032760677;XP_032760678;XP_032760679;XP_032760681;XP_032760682;XP_032760683;XP_032760684;XP_032760685;XP_032760686;XP_032760687;XP_032760688;XP_032760689;XP_032760690;XP_032760691 protein kinase C-binding protein 1 protein-coding 625841076 Zdhhc15 zDHHC palmitoyltransferase 15 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of dendrite development (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 91 (ortholog); oculocutaneous albinism type IB (ortholog); spastic diplegia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) X 67124965 67220296 - 30032202 116887973 MODEL JAAIVD010000014;XM_032889412 XP_032745303 palmitoyltransferase ZDHHC15;zinc finger DHHC-type palmitoyltransferase 15 protein-coding 625841090 Pcm1 pericentriolar material 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centrosome cycle (ortholog); cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH schizophrenia (ortholog); Thyroid Carcinoma, Nonmedullary 1 (ortholog); FOUND IN apical part of cell (ortholog); centriolar satellite (ortholog); centriole (ortholog) 13 46236555 46331171 - 30032202 116914617 MODEL JAAIVD010000008;XM_032918979 XP_032774870 pericentriolar material 1 protein protein-coding 625841133 LOC116889172 ribosome biogenesis protein NSA2 homolog X 60732669 60733442 - 116889172 MODEL JAAIVD010000014 pseudo 625841134 Prc1 protein regulator of cytokinesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN contractile ring (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 2 119931853 119952852 - 30032202 116891921 MODEL JAAIVD010000001;XM_032893348;XM_032893349;XM_032893350;XM_032893351;XM_032893352;XM_032893353 XP_032749239;XP_032749240;XP_032749241;XP_032749242;XP_032749243;XP_032749244 protein-coding 625841165 LOC116885719 60S ribosome subunit biogenesis protein NIP7 homolog 16 11993273 11993808 + 116885719 MODEL JAAIVD010000004 pseudo 625841166 Usp40 ubiquitin specific peptidase 40 4 160054653 160123592 - 22301074;30032202 116899616 MODEL JAAIVD010000003;XM_032901577 XP_032757468 ubiquitin carboxyl-terminal hydrolase 40 protein-coding 625841201 LOC116914766 cytochrome P450 4V2 INVOLVED IN fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Bietti crystalline corneoretinal dystrophy (ortholog); Choroideremia (ortholog); corneal dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 42513127 42539162 + 22301074 116914766 MODEL JAAIVD010000008;XM_032919215 XP_032775106 protein-coding 625841216 LOC116912490 uncharacterized LOC116912490 1 247115616 247159450 - 116912490 MODEL JAAIVD010000025;XR_004389463;XR_004389464 ncrna 625841224 Ppm1b protein phosphatase, Mg2+/Mn2+ dependent 1B ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN N-terminal protein myristoylation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH hypotonia-cystinuria syndrome (ortholog); Lynch syndrome (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleolus (ortholog) 7 7907651 7965953 - 22301074;30032202 116905775 MODEL JAAIVD010000026;XM_032908747;XM_032908748;XM_032908749;XM_032908750 XP_032764638;XP_032764639;XP_032764640;XP_032764641 protein phosphatase 1B protein-coding 625841247 LOC116895773 ATP synthase subunit O, mitochondrial-like 3 48102593 48103156 - 116895773 MODEL JAAIVD010000012 pseudo 625841248 Stac SH3 and cysteine rich domain ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN cellular response to heat (ortholog); muscle contraction (ortholog); positive regulation of cation channel activity (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); T-tubule (ortholog) 8 102542679 102662401 - 30032202 116906881 MODEL JAAIVD010000027;XM_032909793 XP_032765684 SH3 and cysteine-rich domain-containing protein protein-coding 625841264 Sapcd2 suppressor APC domain containing 2 INVOLVED IN establishment of mitotic spindle orientation (ortholog); negative regulation of protein localization to cell cortex (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN apical cortex (ortholog); apical junction complex (ortholog); cytosol (ortholog) 5 11806501 11811666 - 116901305 MODEL JAAIVD010000023;XM_032903107 XP_032758998 suppressor APC domain-containing protein 2 protein-coding 625841274 LOC116906231 la-related protein 4B-like 7 121778047 121780453 - 116906231 MODEL JAAIVD010000026 pseudo 625841275 LOC116889947 olfactory receptor 10P1-like 1 161550243 161551166 + 22301074 116889947 MODEL JAAIVD010000025;XM_032890753 XP_032746644 protein-coding 625841278 Bmpr1b bone morphogenetic protein receptor type 1B ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acromesomelic dysplasia 3 (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog); asthma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 3 19327175 19369915 - 22301074;30032202 116896201 MODEL JAAIVD010000012;XM_032897250;XM_032897251 XP_032753141;XP_032753142 bone morphogenetic protein receptor type-1B protein-coding 625841295 LOC116897579 small nucleolar RNA SNORA17 3 66501677 66501806 - 116897579 MODEL JAAIVD010000012;XR_004387587 snorna 625841298 LOC116883310 uncharacterized LOC116883310 14 52567192 52576961 - 116883310 MODEL JAAIVD010000009;XR_004385744 ncrna 625841303 LOC116898345 elongin-B-like 4 48941900 48943018 - 22301074;30032202 116898345 MODEL JAAIVD010000003;XM_032899666 XP_032755557 protein-coding 625841309 LOC116897635 small Cajal body-specific RNA 2 3 49708320 49708739 + 116897635 MODEL JAAIVD010000012;XR_004387614 ncrna 625841312 Pno1 partner of NOB1 homolog INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) 11 85672944 85680791 - 22301074;30032202 116912661 MODEL JAAIVD010000006;XM_032916780 XP_032772671 RNA-binding protein PNO1 protein-coding 625841323 Arrdc1 arrestin domain containing 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN extracellular transport (ortholog); extracellular vesicle biogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular exosome (ortholog); extracellular vesicle (ortholog) 5 12255399 12262542 + 30032202 116901332 MODEL JAAIVD010000023;XM_032903153;XM_032903154;XM_032903155 XP_032759044;XP_032759045;XP_032759046 arrestin domain-containing protein 1 protein-coding 625841342 Tex14 testis expressed 14, intercellular bridge forming factor ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to leukemia inhibitory factor (ortholog); intercellular bridge organization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 23 (ortholog); spermatogenic failure 3 (ortholog); FOUND IN intercellular bridge (ortholog); kinetochore (ortholog); midbody (ortholog) 9 83244030 83339632 - 22301074;30032202 116910101 MODEL JAAIVD010000002;XM_032913928 XP_032769819 inactive serine/threonine-protein kinase TEX14 protein-coding 625841375 Kif4a kinesin family member 4A INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); cerebellar hypoplasia (ortholog); COVID-19 (ortholog); FOUND IN midbody (ortholog) X 58740239 58798787 - 22301074;30032202 116887923 MODEL JAAIVD010000014;XM_032889389 XP_032745280 chromosome-associated kinesin KIF4A protein-coding 625841403 LOC116890232 testis-specific H1 histone INVOLVED IN sperm DNA condensation (ortholog); spermatid nucleus elongation (ortholog); FOUND IN chromatin (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) 1 271085553 271086881 - 116890232 MODEL JAAIVD010000025;XM_032890962 XP_032746853 protein-coding 625841408 LOC116895834 voltage-dependent anion-selective channel protein 1-like 3 78807135 78807927 - 116895834 MODEL JAAIVD010000012 pseudo 625841409 Grin2d glutamate ionotropic receptor NMDA type subunit 2D ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); glutamate-gated receptor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 46 (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); NMDA selective glutamate receptor complex (ortholog) 2 153648088 153684948 + 22301074;30032202 116892121 MODEL JAAIVD010000001;XM_032893602;XM_032893603 XP_032749493;XP_032749494 glutamate receptor ionotropic, NMDA 2D protein-coding 625841432 LOC116895832 heterogeneous nuclear ribonucleoprotein A3-like 3 78129776 78130910 - 116895832 MODEL JAAIVD010000012 pseudo 625841433 Ralgapa2 Ral GTPase activating protein catalytic subunit alpha 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 125865805 126136191 - 22301074;30032202 116902064 MODEL JAAIVD010000023;XM_032904353 XP_032760244 ral GTPase-activating protein subunit alpha-2 protein-coding 625841478 Rsc1a1 regulator of solute carriers 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); INVOLVED IN intestinal absorption (ortholog); negative regulation of D-glucose transmembrane transport (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN brush border (ortholog); cell junction (ortholog); membrane (ortholog) 1 16459061 16468303 + 116893252 MODEL JAAIVD010000025;XM_032895116 XP_032751007 regulatory solute carrier protein family 1 member 1 protein-coding 625841485 LOC116900934 gamma-aminobutyric acid receptor-associated protein-like 2 5 83003490 83020082 + 116900934 MODEL JAAIVD010000023 pseudo 625841486 Kiaa1210 KIAA1210 ortholog FOUND IN acrosomal vesicle (ortholog); basal ectoplasmic specialization (ortholog) X 102601173 102645643 - 116888735 MODEL JAAIVD010000014;XM_032890026 XP_032745917 acrosomal protein KIAA1210 homolog protein-coding 625841504 LOC116903569 importin-7-like 6 60637741 60642467 + 22301074;30032202 116903569 MODEL JAAIVD010000024;XM_032906188 XP_032762079 protein-coding 625841509 LOC116893202 olfactory receptor-like protein COR9 2 106746882 106750737 + 116893202 MODEL JAAIVD010000001 pseudo 625841510 LOC116901085 uncharacterized LOC116901085 5 151971048 151973367 + 116901085 MODEL JAAIVD010000023;XM_032902648 XP_032758539 uncharacterized protein LOC116901085 protein-coding 625841516 Lrrc29 Leucine-rich repeat-containing protein 29 ASSOCIATED WITH pneumoconiosis (ortholog) 17 25038263 25052255 - 22301074;30032202 116886375 MODEL JAAIVD010000011;XM_032887840;XM_032887841;XM_032887842 XP_032743731;XP_032743732;XP_032743733 leucine rich repeat containing 29 protein-coding 625841531 LOC116888015 dystrophin-like X 79927226 79946852 - 30032202 116888015 MODEL JAAIVD010000014;XM_032889429 XP_032745320 protein-coding 625841538 LOC116914363 zinc finger protein Pegasus-like 13 75072413 75073603 - 30032202 116914363 MODEL JAAIVD010000008;XM_032918572 XP_032774463 protein-coding 625841541 LOC116888929 uncharacterized LOC116888929 X 63370 96993 - 22301074;30032202 116888929 MODEL JAAIVD010000014;XM_032890171 XP_032746062 uncharacterized protein LOC116888929 protein-coding 625841551 Abcf1 ATP binding cassette subfamily F member 1 ENCODES a protein that exhibits ATP binding (ortholog); ribosome binding (ortholog); translation activator activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); ribosome biogenesis (ortholog); translational initiation (ortholog); ASSOCIATED WITH allergic disease (ortholog); Disease Progression (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) 18 9149234 9162109 - 22301074;30032202 116887479 MODEL JAAIVD010000013;XM_032889098;XM_032889099 XP_032744989;XP_032744990 ATP-binding cassette sub-family F member 1 protein-coding 625841582 LOC116914444 uncharacterized LOC116914444 1 188555521 188588991 - 116914444 MODEL JAAIVD010000025 pseudo 625841583 LOC116904684 small nucleolar RNA SNORA2/SNORA34 family 6 59525822 59525958 - 116904684 MODEL JAAIVD010000024;XR_004388382 snorna 625841586 LOC116889886 vomeronasal type-1 receptor 4-like 1 158278863 158279795 - 22301074;30032202 116889886 MODEL JAAIVD010000025;XM_032890708 XP_032746599 protein-coding 625841590 Psmc5 proteasome 26S subunit, ATPase 5 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); DNA-binding transcription factor binding (ortholog); general transcription initiation factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of inclusion body assembly (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosolic proteasome complex (ortholog) 9 72857877 72863803 - 22301074;30032202 116908757 MODEL JAAIVD010000002;XM_032912108 XP_032767999 26S proteasome regulatory subunit 8 protein-coding 625841606 LOC116900251 olfactory receptor 1013-like 5 63075229 63076164 - 22301074;30032202 116900251 MODEL JAAIVD010000023;XM_032902003 XP_032757894 protein-coding 625841609 Txndc5 thioredoxin domain containing 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Arthritis (ortholog); Neoplasm Metastasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 14 57558303 57585087 - 22301074;30032202 116883277 MODEL JAAIVD010000009;XM_032884265 XP_032740156 thioredoxin domain-containing protein 5 protein-coding 625841623 LOC116884043 uncharacterized LOC116884043 14 569726 572104 - 116884043 MODEL JAAIVD010000009;XR_004385812 ncrna 625841627 Fbxo34 F-box protein 34 12 75509616 75576547 - 22301074 116913099 MODEL JAAIVD010000007;XM_032917232;XM_032917233;XM_032917234;XM_032917235;XM_032917236;XR_004389597 XP_032773123;XP_032773124;XP_032773125;XP_032773126;XP_032773127 F-box only protein 34 protein-coding 625841650 Icam2 intercellular adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); malignant mesothelioma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cleavage furrow (ortholog); microvillus (ortholog) 9 72741031 72745700 + 22301074;30032202 116909952 MODEL JAAIVD010000002;XM_032913727 XP_032769618 protein-coding 625841659 LOC116896860 uncharacterized LOC116896860 3 98356912 98360692 - 116896860 MODEL JAAIVD010000012;XR_004387374 ncrna 625841664 LOC116904692 small nucleolar RNA SNORA48 6 76278418 76278557 + 116904692 MODEL JAAIVD010000024;XR_004388388 snorna 625841667 Nosip nitric oxide synthase interacting protein ENCODES a protein that exhibits molecular sequestering activity (ortholog); INVOLVED IN negative regulation of catalytic activity (ortholog); negative regulation of nitric-oxide synthase activity (ortholog); regulation of nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH holoprosencephaly (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 154468341 154483279 - 22301074;30032202 116892172 MODEL JAAIVD010000001;XM_032893678;XM_032893679 XP_032749569;XP_032749570 nitric oxide synthase-interacting protein protein-coding 625841684 Has3 hyaluronan synthase 3 ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); hyaluronan biosynthetic process (ortholog); polysaccharide biosynthetic process (ortholog); ASSOCIATED WITH pulmonary hypertension (ortholog); steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); hyaluranon cable (ortholog) 17 26594899 26603626 + 30032202 116886068 MODEL JAAIVD010000011;XM_032887382 XP_032743273 protein-coding 625841692 Ptk7 protein tyrosine kinase 7 (inactive) INVOLVED IN actin cytoskeleton organization (ortholog); axis elongation (ortholog); cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); membrane (ortholog) 4 83231613 83299402 + 22301074;30032202 116898405 MODEL JAAIVD010000003;XM_032899693 XP_032755584 inactive tyrosine-protein kinase 7 protein-coding 625841717 LOC116890412 small nucleolar RNA SNORA73 family 1 25900439 25900642 + 116890412 MODEL JAAIVD010000025;XR_004386613 snorna 625841720 Terb2 telomere repeat binding bouquet formation protein 2 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH spermatogenic failure 3 (ortholog); spermatogenic failure 59 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 5 100296579 100314670 + 30032202 116900605 MODEL JAAIVD010000023;XM_032902321 XP_032758212 telomere repeats-binding bouquet formation protein 2 protein-coding 625841731 KEG97_t06 tRNA-Met MT 3833 3901 + 64988240 trna 625841732 LOC116909465 uncharacterized LOC116909465 9 35012228 35102540 + 116909465 MODEL JAAIVD010000002;XR_004389074 ncrna 625841737 Ttc22 tetratricopeptide repeat domain 22 1 48167935 48184930 - 22301074 116899403 MODEL JAAIVD010000025;XM_032901140 XP_032757031 tetratricopeptide repeat protein 22 protein-coding 625841748 Emc10 ER membrane protein complex subunit 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Dysmorphic Facies and Variable Seizures (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); extracellular region (ortholog) 2 155037537 155043796 + 30032202 116892207 MODEL JAAIVD010000001;XM_032893761 XP_032749652 protein-coding 625841759 Cdh15 cadherin 15 ASSOCIATED WITH autosomal dominant intellectual developmental disorder 1 (ortholog); autosomal dominant intellectual developmental disorder 3 (ortholog); intellectual disability (ortholog); FOUND IN caveola (ortholog); Golgi apparatus (ortholog); neuromuscular junction (ortholog) 17 42479094 42499380 + 22301074;30032202 116886485 MODEL JAAIVD010000011;XM_032887988 XP_032743879 cadherin-15 protein-coding 625841777 Cfi complement factor I INVOLVED IN cellular response to interleukin-6 (ortholog); complement activation (ortholog); ASSOCIATED WITH age related macular degeneration 13 (ortholog); atypical hemolytic-uremic syndrome (ortholog); C3 Glomerulopathy 3 (ortholog); FOUND IN extracellular space (ortholog) 3 29430890 29466129 - 22301074 116895318 MODEL JAAIVD010000012;XM_032896627 XP_032752518 protein-coding 625841795 Diaph2 diaphanous related formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); axon midline choice point recognition (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); primary ovarian insufficiency 2A (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleolus (ortholog) X 82907463 83094166 - 22301074;30032202 116888029 MODEL JAAIVD010000014;XM_032889437 XP_032745328 protein diaphanous homolog 2 protein-coding 625841815 Pipox pipecolic acid and sarcosine oxidase ENCODES a protein that exhibits L-pipecolate oxidase activity (ortholog); sarcosine oxidase activity (ortholog); INVOLVED IN L-lysine catabolic process to acetyl-CoA via L-pipecolate (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH peroxisomal disease (ortholog); FOUND IN peroxisome (ortholog) 9 96561757 96575286 - 22301074;30032202 116908701 MODEL JAAIVD010000002;XM_032912031 XP_032767922 peroxisomal sarcosine oxidase protein-coding 625841827 LOC116912208 ribosomal protein 63, mitochondrial-like 11 79570820 79571133 - 116912208 MODEL JAAIVD010000006 pseudo 625841828 LOC116913878 60S ribosomal protein L29-like 1 250544201 250544885 + 22301074;30032202 116913878 MODEL JAAIVD010000025;XM_032918170 XP_032774061 protein-coding 625841832 Vpreb1 V-set pre-B cell surrogate light chain 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell proliferation (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 2152833 2153666 - 30032202 116897771 MODEL JAAIVD010000003;XM_032899201 XP_032755092 immunoglobulin iota chain protein-coding 625841838 Pom121l12 POM121 transmembrane nucleoporin like 12 11 83330722 83331747 + 116912225 MODEL JAAIVD010000006;XM_032916184 XP_032772075 POM121-like protein 12 protein-coding 625841842 LOC116896957 uncharacterized LOC116896957 1 34494469 34507903 - 116896957 MODEL JAAIVD010000025;XR_004387386;XR_004387387 ncrna 625841850 Abi3 ABI family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); negative regulation of lamellipodium assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 9 58551393 58562473 + 30032202 116909461 MODEL JAAIVD010000002;XM_032913045 XP_032768936 ABI gene family member 3 protein-coding 625841862 Trim2 tripartite motif containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease type 2R (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog) 3 69321276 69434428 + 22301074;30032202 116896738 MODEL JAAIVD010000012;XM_032898167;XM_032898168;XM_032898169;XM_032898170;XM_032898171;XM_032898172 XP_032754058;XP_032754059;XP_032754060;XP_032754061;XP_032754062;XP_032754063 tripartite motif-containing protein 2 protein-coding 625841894 LOC116911287 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45655214 45673500 - 22301074;30032202 116911287 MODEL JAAIVD010000005;XM_032915194 XP_032771085 protein-coding 625841904 Mcoln3 mucolipin TRP cation channel 3 ENCODES a protein that exhibits monoatomic anion channel activity (ortholog); potassium channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); locomotory behavior (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 14762626 14797548 - 30032202 116896173 MODEL JAAIVD010000012;XM_032897210;XM_032897211 XP_032753101;XP_032753102 mucolipin 3;mucolipin-3 protein-coding 625841924 LOC116902451 uncharacterized LOC116902451 1 116673525 116675371 + 116902451 MODEL JAAIVD010000025;XR_004388077 ncrna 625841928 Selenom selenoprotein M INVOLVED IN adipose tissue development (ortholog); corticosterone secretion (ortholog); hormone metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 11 72512212 72514745 + 30032202 116912209 MODEL JAAIVD010000006;XM_032916156 XP_032772047 protein-coding 625841937 LOC116908515 60S ribosomal protein L29-like 9 32403342 32403811 + 116908515 MODEL JAAIVD010000002 pseudo 625841938 LOC116902733 60S ribosomal protein L34-like 6 58419891 58420237 + 116902733 MODEL JAAIVD010000024 pseudo 625841939 Edn1 endothelin 1 ENCODES a protein that exhibits cytokine activity (ortholog); endothelin A receptor binding (ortholog); endothelin B receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; inflammatory response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN basal part of cell (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 14 61273066 61279563 + 22301074;30032202 116883784 MODEL JAAIVD010000009;XM_032885026 XP_032740917 endothelin-1 protein-coding 625841948 Eif4b eukaryotic translation initiation factor 4B PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); major depressive disorder (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 1 260977264 260998285 - 22301074 116883603 MODEL JAAIVD010000025;XM_032884789;XM_032884798 XP_032740680;XP_032740689 protein-coding 625841969 Hao1 hydroxyacid oxidase 1 ENCODES a protein that exhibits (S)-2-hydroxy-acid oxidase activity (ortholog); FMN binding (ortholog); glyoxylate oxidase activity (ortholog); INVOLVED IN fatty acid alpha-oxidation (ortholog); glycolate catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); nephrolithiasis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) 5 114194421 114250905 - 22301074 116900650 MODEL JAAIVD010000023;XM_032902361 XP_032758252 protein-coding 625841981 LOC116912212 non-histone chromosomal protein HMG-14-like 11 55144132 55144424 - 116912212 MODEL JAAIVD010000006 pseudo 625841982 LOC116898526 pumilio homolog 3-like 4 139878515 139891831 - 116898526 MODEL JAAIVD010000003 pseudo 625841983 LOC116892896 zinc finger protein 208-like 2 199667394 199683033 + 22301074 116892896 MODEL JAAIVD010000001;XM_032894808 XP_032750699 protein-coding 625841991 Elf2 E74 like ETS transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cerebellar Ataxia, Neuropathy, and Vestibular Areflexia Syndrome (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 3 103111374 103199643 + 22301074;30032202 116896893 MODEL JAAIVD010000012;XM_032898439 XP_032754330 ETS-related transcription factor Elf-2 protein-coding 625842005 LOC116901889 sodium/nucleoside cotransporter 2 5 100523322 100546871 + 22301074;30032202 116901889 MODEL JAAIVD010000023;XM_032904098 XP_032759989 protein-coding 625842027 LOC116897413 U6 spliceosomal RNA 3 144243212 144243318 - 116897413 MODEL JAAIVD010000012;XR_004387455 snrna 625842030 LOC116889512 small nucleolar RNA SNORA17 X 83412332 83412462 - 116889512 MODEL JAAIVD010000014;XR_004386457 snorna 625842033 LOC116915187 small nucleolar RNA SNORD113/SNORD114 family 13 6512159 6512234 + 116915187 MODEL JAAIVD010000008 pseudo 625842034 Crnkl1 crooked neck pre-mRNA splicing factor 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 5 125555750 125573485 - 22301074;30032202 116902057 MODEL JAAIVD010000023;XM_032904347 XP_032760238 crooked neck-like protein 1 protein-coding 625842052 Il12rb2 interleukin 12 receptor subunit beta 2 ENCODES a protein that exhibits coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN interleukin-12-mediated signaling pathway (ortholog); positive regulation of type II interferon production (ortholog); response to cytokine (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); primary biliary cholangitis 3 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 76839956 76906237 - 22301074;30032202 116903711 MODEL JAAIVD010000024;XM_032906387 XP_032762278 interleukin-12 receptor subunit beta-2 protein-coding 625842071 Mbp myelin basic protein ENCODES a protein that exhibits calmodulin binding (ortholog); lipid binding (ortholog); protease binding (ortholog); INVOLVED IN maintenance of blood-brain barrier (ortholog); MAPK cascade (ortholog); membrane organization (ortholog); ASSOCIATED WITH angiostrongyliasis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cell periphery (ortholog); cell projection (ortholog); cell surface (ortholog) 15 49732626 49818803 - 22301074;30032202 116884849 MODEL JAAIVD010000010;XM_032886088;XM_032886089;XM_032886090;XM_032886091;XM_032886092;XM_032886093;XM_032886094 XP_032741979;XP_032741980;XP_032741981;XP_032741982;XP_032741983;XP_032741984;XP_032741985 protein-coding 625842092 LOC116891811 heat shock cognate 71 kDa protein-like 2 103877478 103879680 + 116891811 MODEL JAAIVD010000001 pseudo 625842093 Nthl1 nth like DNA glycosylase 1 ENCODES a protein that exhibits class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); nucleotide-excision repair (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); familial adenomatous polyposis (ortholog); familial adenomatous polyposis 1 (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 9 1914150 1920028 + 22301074;30032202 116909157 MODEL JAAIVD010000002;XM_032912641;XM_032912643;XM_032912644 XP_032768532;XP_032768534;XP_032768535 endonuclease III-like protein 1 protein-coding 625842109 Prodh proline dehydrogenase 1 ENCODES a protein that exhibits amino acid binding (ortholog); FAD binding (ortholog); proline dehydrogenase activity (ortholog); INVOLVED IN regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 4 3328494 3345633 - 30032202 116898660 MODEL JAAIVD010000003;XM_032899895 XP_032755786 proline dehydrogenase 1, mitochondrial protein-coding 625842127 LOC116892565 peptidyl-prolyl cis-trans isomerase FKBP1A-like 2 171811526 171812838 - 22301074 116892565 MODEL JAAIVD010000001;XM_032894343 XP_032750234 protein-coding 625842132 Taar1 trace amine associated receptor 1 ENCODES a protein that exhibits G protein-coupled amine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); trace-amine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) 2 209982371 209983412 + 22301074;30032202 116894662 MODEL JAAIVD010000001;XM_032896365 XP_032752256 trace amine-associated receptor 1 protein-coding 625842136 Bdp1 BDP1 general transcription factor IIIB subunit PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 112 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN nucleoplasm (ortholog) 3 196495038 196587349 + 30032202 116896045 MODEL JAAIVD010000012;XM_032897045 XP_032752936 B double prime 1, subunit of RNA polymerase III transcription initiation factor IIIB;transcription factor TFIIIB component B'' homolog protein-coding 625842179 Nnt nicotinamide nucleotide transhydrogenase ENCODES a protein that exhibits NADP binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular oxidant detoxification (ortholog); intracellular oxygen homeostasis (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); glucocorticoid deficiency 1 (ortholog); Glucocorticoid Deficiency 4 (ortholog); FOUND IN mitochondrion (ortholog) 3 177364721 177458712 + 22301074;30032202 116897172 MODEL JAAIVD010000012;XM_032898851;XM_032898852;XM_032898853;XM_032898854;XM_032898856;XM_032898857 XP_032754742;XP_032754743;XP_032754744;XP_032754745;XP_032754747;XP_032754748 NAD(P) transhydrogenase, mitochondrial protein-coding 625842220 Plxnd1 plexin D1 ENCODES a protein that exhibits protein domain specific binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); aorta development (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH Congenital Heart Defects, Multiple Types, 9 (ortholog); diastolic heart failure (ortholog); DiGeorge syndrome (ortholog); FOUND IN axon (ortholog); cell body (ortholog); glutamatergic synapse (ortholog) 6 30735991 30776018 + 22301074;30032202 116903373 MODEL JAAIVD010000024;XM_032905860 XP_032761751 plexin-D1 protein-coding 625842260 Gdf10 growth differentiation factor 10 INVOLVED IN cerebellum development (ortholog); fat cell differentiation (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Breast Neoplasms (ortholog); Mesothelioma (ortholog); FOUND IN extracellular space (ortholog) 13 9693479 9705477 + 22301074;30032202 116914813 MODEL JAAIVD010000008;XM_032919269 XP_032775160 growth/differentiation factor 10 protein-coding 625842267 LOC116894961 small nucleolar RNA SNORA31 2 225355529 225355655 - 116894961 MODEL JAAIVD010000001;XR_004387155 snorna 625842270 Polr2i RNA polymerase II subunit I INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) 2 165775587 165777029 - 22301074;30032202 116892330 MODEL JAAIVD010000001;XM_032893958 XP_032749849 DNA-directed RNA polymerase II subunit RPB9 protein-coding 625842280 LOC116890122 huntingtin-interacting protein K-like 1 241720075 241720443 + 30032202 116890122 MODEL JAAIVD010000025;XM_032890860 XP_032746751 protein-coding 625842284 LOC116904435 nucleoside diphosphate kinase B-like 6 118565237 118565692 - 116904435 MODEL JAAIVD010000024 pseudo 625842285 Flywch1 FLYWCH-type zinc finger 1 ENCODES a protein that exhibits transcription coactivator binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Silver-Russell syndrome (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 1054092 1076830 - 116909112 MODEL JAAIVD010000002;XM_032912588 XP_032768479 FLYWCH-type zinc finger-containing protein 1 protein-coding 625842295 LOC116912494 14-3-3 protein sigma-like 11 18733869 18734823 - 116912494 MODEL JAAIVD010000006 pseudo 625842296 C6 complement C6 INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); C6 Deficiency, Subtotal (ortholog); calcinosis (ortholog); FOUND IN extracellular space (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 3 175474927 175542057 - 22301074 116895633 MODEL JAAIVD010000012;XM_032896841 XP_032752732 complement component C6 protein-coding 625842317 Itpkc inositol-trisphosphate 3-kinase C ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); coronary aneurysm (ortholog); Kawasaki disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 168714290 168736017 + 22301074;30032202 116892439 MODEL JAAIVD010000001;XM_032894128 XP_032750019 protein-coding 625842328 LOC116892215 40S ribosomal protein S27-like 1 8286964 8287215 - 116892215 MODEL JAAIVD010000025 pseudo 625842329 LOC116903015 COMM domain-containing protein 1-like 6 153833722 153834335 + 22301074;30032202 116903015 MODEL JAAIVD010000024;XM_032905327 XP_032761218 protein-coding 625842334 Gadl1 glutamate decarboxylase like 1 ASSOCIATED WITH Liver Neoplasms (ortholog) 8 107197595 107338990 + 22301074;30032202 116907083 MODEL JAAIVD010000027;XM_032910039 XP_032765930 acidic amino acid decarboxylase GADL1 protein-coding 625842352 LOC116895298 alcohol dehydrogenase 6 3 20759623 20788633 - 22301074;30032202 116895298 MODEL JAAIVD010000012;XM_032896610 XP_032752501 protein-coding 625842362 LOC116912993 small nucleolar RNA SNORA17 11 8808928 8809059 + 116912993 MODEL JAAIVD010000006;XR_004389556 snorna 625842365 Plagl1 PLAG1 like zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); Stomach Neoplasms (ortholog); transient neonatal diabetes mellitus 1 (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear body (ortholog) 2 224070399 224076797 - 30032202 116893012 MODEL JAAIVD010000001;XM_032894975 XP_032750866 zinc finger protein PLAGL1 protein-coding 625842371 Haus4 HAUS augmin like complex subunit 4 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 12 70453507 70464714 + 22301074;30032202 116913821 MODEL JAAIVD010000007;XM_032918133 XP_032774024 HAUS augmin-like complex subunit 4 protein-coding 625842385 LOC116893352 protein Mis18-beta-like 2 157954426 157957512 - 116893352 MODEL JAAIVD010000001 pseudo 625842386 Rab11fip4 RAB11 family interacting protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN neural retina development (ortholog); positive regulation of G1 to G0 transition (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cleavage furrow (ortholog); endocytic vesicle (ortholog); endosome (ortholog) 9 90744211 90849494 - 22301074;30032202 116908586 MODEL JAAIVD010000002;XM_032911802 XP_032767693 rab11 family-interacting protein 4 protein-coding 625842404 LOC116897990 keratin-associated protein 13-2-like 4 55066454 55067585 - 116897990 MODEL JAAIVD010000003;XM_032899393 XP_032755284 protein-coding 625842409 LOC116887863 phosphoenolpyruvate carboxykinase [GTP], mitochondrial-like X 45141519 45146599 + 116887863 MODEL JAAIVD010000014 pseudo 625842410 Ahi1 Abelson helper integration site 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cilium assembly (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar disease (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); centriole (ortholog) 2 215493701 215626061 - 22301074;30032202 116892970 MODEL JAAIVD010000001;XM_032894926;XM_032894927;XM_032894928;XM_032894929;XR_004386990 XP_032750817;XP_032750818;XP_032750819;XP_032750820 jouberin protein-coding 625842450 Tnfrsf25 TNF receptor superfamily member 25 FOUND IN plasma membrane (ortholog) 1 8621482 8626657 - 22301074;30032202 116892352 MODEL JAAIVD010000025;XM_032894005 XP_032749896 tumor necrosis factor receptor superfamily member 25 protein-coding 625842463 LOC116893560 DDB1- and CUL4-associated factor 12-like 2 215078160 215080860 + 116893560 MODEL JAAIVD010000001 pseudo 625842464 Pdk4 pyruvate dehydrogenase kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); pyruvate dehydrogenase (acetyl-transferring) kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to starvation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 6 133130842 133142939 + 30032202 116904096 MODEL JAAIVD010000024;XM_032906966 XP_032762857 pyruvate dehydrogenase kinase, isozyme 4 protein-coding 625842479 Cox7a2l cytochrome c oxidase subunit 7A2 like ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrial respirasome assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 7 9443813 9455337 + 22301074;30032202 116905790 MODEL JAAIVD010000026;XM_032908768 XP_032764659 cytochrome c oxidase subunit 7A-related protein, mitochondrial protein-coding 625842486 Nrl neural retina leucine zipper ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH enhanced S-cone syndrome (ortholog); Foveal Hypoplasia (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 12 69486146 69488147 + 30032202 116913805 MODEL JAAIVD010000007;XM_032918111;XM_032918112 XP_032774002;XP_032774003 neural retina-specific leucine zipper protein protein-coding 625842494 LOC116886728 small nucleolar RNA SNORA19 17 151030 151139 - 116886728 MODEL JAAIVD010000011 pseudo 625842495 Huwe1 HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits DNA binding (ortholog); histone ubiquitin ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); canonical NF-kappaB signal transduction (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); blepharophimosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 12830320 12958759 - 22301074;30032202 116888416 MODEL JAAIVD010000014;XM_032889688 XP_032745579 E3 ubiquitin-protein ligase HUWE1 protein-coding 625842584 Cenpu centromere protein U INVOLVED IN chordate embryonic development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); inner kinetochore (ortholog) 13 41343979 41366602 - 30032202 116914316 MODEL JAAIVD010000008;XM_032918551 XP_032774442 protein-coding 625842600 Cacna1a calcium voltage-gated channel subunit alpha1 A ENCODES a protein that exhibits calmodulin binding (ortholog); high voltage-gated calcium channel activity (ortholog); syntaxin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); behavioral response to pain (ortholog); calcium ion import (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alternating Hemiplegia of Childhood 1 (ortholog); amyotrophic lateral sclerosis (ortholog); Ataxia (ortholog); FOUND IN calyx of Held (ortholog); cell projection (ortholog); cytoplasm (ortholog) 17 15653693 15949541 - 22301074;30032202 116886239 MODEL JAAIVD010000011;XM_032887650 XP_032743541 voltage-dependent P/Q-type calcium channel subunit alpha-1A protein-coding 625842654 LOC116908635 olfactory receptor 2T27-like 9 39734050 39735057 + 22301074 116908635 MODEL JAAIVD010000002;XM_032911890 XP_032767781 protein-coding 625842657 LOC116908322 U6 spliceosomal RNA 8 16373204 16373310 - 116908322 MODEL JAAIVD010000027;XR_004388879 snrna 625842660 LOC116884120 U6 spliceosomal RNA 14 12696007 12696108 - 116884120 MODEL JAAIVD010000009;XR_004385850 snrna 625842663 LOC116889305 heterogeneous nuclear ribonucleoprotein A1-like X 16458050 16458983 - 116889305 MODEL JAAIVD010000014 pseudo 625842664 LOC116893824 pyrethroid hydrolase Ces2e-like 2 54823785 54831184 - 30032202 116893824 MODEL JAAIVD010000001;XM_032895538;XM_032895539 XP_032751429;XP_032751430 protein-coding 625842679 Gmeb1 glucocorticoid modulatory element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); Hsp27 protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 25986545 26027501 + 30032202 116895595 MODEL JAAIVD010000025;XM_032896819;XM_032896822;XM_032896823 XP_032752710;XP_032752713;XP_032752714 glucocorticoid modulatory element-binding protein 1 protein-coding 625842699 LOC116889146 protein FAM156A/FAM156B-like 1 121912538 121913160 + 116889146 MODEL JAAIVD010000025 pseudo 625842700 LOC116906361 small nucleolar RNA SNORD113/SNORD114 family 7 127261794 127261868 + 116906361 MODEL JAAIVD010000026;XR_004388632 snorna 625842703 LOC116884389 mitogen-activated protein kinase 4-like 15 58049478 58064661 + 116884389 MODEL JAAIVD010000010 pseudo 625842704 LOC116906661 prothymosin alpha-like 1 35792331 35792789 - 30032202 116906661 MODEL JAAIVD010000025;XM_032909843 XP_032765734 protein-coding 625842708 Zfhx4 zinc finger homeobox 4 ASSOCIATED WITH Congenital Corneal Opacities, Cornea Guttata, and Corectopia (ortholog); hereditary congenital ptosis 1 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) 3 138148134 138329670 - 22301074;30032202 116897015 MODEL JAAIVD010000012;XM_032898618 XP_032754509 zinc finger homeobox protein 4 protein-coding 625842723 LOC116910094 ubiquitin-like protein FUBI 9 82693928 82694424 + 22301074;30032202 116910094 MODEL JAAIVD010000002;XM_032913918 XP_032769809 protein-coding 625842728 C4H3orf70 chromosome 4 C3orf70 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 4 6320320 6367884 - 116898709 MODEL JAAIVD010000003;XM_032900000 XP_032755891 UPF0524 protein C3orf70 homolog protein-coding 625842734 LOC116908248 proline-rich protein 23B-like 8 90249866 90250588 + 116908248 MODEL JAAIVD010000027;XM_032911504 XP_032767395 protein-coding 625842738 LOC116890026 transmembrane protein 186-like 1 196044240 196044890 - 30032202 116890026 MODEL JAAIVD010000025;XM_032890804 XP_032746695 protein-coding 625842741 Gtf2a2 general transcription factor IIA subunit 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 64355473 64368417 + 22301074;30032202 116908146 MODEL JAAIVD010000027;XM_032911440;XM_032911441 XP_032767331;XP_032767332 transcription initiation factor IIA subunit 2 protein-coding 625842753 LOC116886817 40S ribosomal protein S20-like 1 24391055 24391444 + 22301074;30032202 116886817 MODEL JAAIVD010000025;XM_032888248 XP_032744139 protein-coding 625842757 Tbx21 T-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN lymphocyte migration (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of interleukin-2 production (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); Asthma and Nasal Polyps (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) 9 57275432 57291934 + 22301074;30032202 116909374 MODEL JAAIVD010000002;XM_032912928 XP_032768819 T-box transcription factor TBX21 protein-coding 625842767 LOC116885842 CD209 antigen-like protein E 16 1928306 1939406 + 116885842 MODEL JAAIVD010000004;XM_032887181 XP_032743072 protein-coding 625842775 Plbd1 phospholipase B domain containing 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); phospholipase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog) 6 12795783 12854406 + 22301074;30032202 116903155 MODEL JAAIVD010000024;XM_032905519 XP_032761410 phospholipase B-like 1 protein-coding 625842790 LOC116914197 U1 spliceosomal RNA 12 38125091 38125251 - 116914197 MODEL JAAIVD010000007;XR_004389732 snrna 625842793 LOC116909848 secreted and transmembrane protein 1A-like 9 62952980 62964061 + 30032202 116909848 MODEL JAAIVD010000002;XM_032913573 XP_032769464 protein-coding 625842803 LOC116907880 uncharacterized LOC116907880 8 46613799 46654153 - 116907880 MODEL JAAIVD010000027;XR_004388852 ncrna 625842808 Hpse2 heparanase 2 (inactive) ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparanase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); urofacial syndrome (ortholog); FOUND IN extracellular matrix (ortholog) 2 41882475 42887080 - 22301074;30032202 116891183 MODEL JAAIVD010000001;XM_032892000;XM_032892001;XM_032892002 XP_032747891;XP_032747892;XP_032747893 inactive heparanase-2 protein-coding 625842825 Myo19 myosin XIX ENCODES a protein that exhibits actin binding (ortholog); ATP hydrolysis activity (ortholog); myosin light chain binding (ortholog); INVOLVED IN mitochondrion migration along actin filament (ortholog); mitocytosis (ortholog); regulation of cytokinesis (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 85793670 85823146 - 22301074;30032202 116909192 MODEL JAAIVD010000002;XM_032912690 XP_032768581 unconventional myosin-XIX protein-coding 625842855 LOC116908238 40S ribosomal protein S2-like 8 84347885 84363191 + 116908238 MODEL JAAIVD010000027 pseudo 625842856 Ei24 EI24 autophagy associated transmembrane protein ENCODES a protein that exhibits importin-alpha family protein binding (ortholog); INVOLVED IN autophagy (ortholog); cellular response to UV-C (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 8 32960494 32972729 - 30032202 116906908 MODEL JAAIVD010000027;XM_032909825 XP_032765716 etoposide-induced protein 2.4 homolog protein-coding 625842870 Rpl37 ribosomal protein L37 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 3 175203321 175205365 - 22301074;30032202 116897153 MODEL JAAIVD010000012;XM_032898823 XP_032754714 60S ribosomal protein L37 protein-coding 625842878 Ushbp1 USH1 protein network component harmonin binding protein 1 ENCODES a protein that exhibits PDZ domain binding (ortholog) 13 13605883 13616251 + 116915105 MODEL JAAIVD010000008;XM_032919535 XP_032775426 Usher syndrome type-1C protein-binding protein 1 protein-coding 625842894 LOC116898814 E3 ubiquitin-protein ligase DTX3L-like 4 20911053 20920899 - 30032202 116898814 MODEL JAAIVD010000003;XM_032900167;XM_032900168 XP_032756058;XP_032756059 protein-coding 625842906 Polr2g RNA polymerase II subunit G INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II, core complex (ortholog) 2 9148556 9152088 + 22301074;30032202 116890926 MODEL JAAIVD010000001;XM_032891566 XP_032747457 DNA-directed RNA polymerase II subunit RPB7 protein-coding 625842918 Pacs1 phosphofurin acidic cluster sorting protein 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN lymphocyte homeostasis (ortholog); positive regulation of protein binding (ortholog); protein localization to Golgi apparatus (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN COPI-coated vesicle (ortholog); perinuclear region of cytoplasm (ortholog) 2 2390668 2520331 + 30032202 116890738 MODEL JAAIVD010000001;XM_032891196 XP_032747087 protein-coding 625842947 Usp24 ubiquitin specific peptidase 24 ASSOCIATED WITH Dwarfism (ortholog) 1 48377278 48506353 - 22301074;30032202 116899426 MODEL JAAIVD010000025;XM_032901177 XP_032757068 ubiquitin carboxyl-terminal hydrolase 24 protein-coding 625843019 LOC116884962 DNA methyltransferase 1-associated protein 1-like 15 45729839 45732865 - 116884962 MODEL JAAIVD010000010 pseudo 625843020 Ciapin1 cytokine induced apoptosis inhibitor 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); iron ion binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 17 1702762 1718423 - 22301074;30032202 116886209 MODEL JAAIVD010000011;XM_032887597;XM_032887598;XM_032887599;XM_032887600 XP_032743488;XP_032743489;XP_032743490;XP_032743491 anamorsin protein-coding 625843041 Usp1 ubiquitin specific peptidase 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); monoubiquitinated protein deubiquitination (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 55579022 55596221 - 22301074;30032202 116899923 MODEL JAAIVD010000025;XM_032901787;XM_032901788 XP_032757678;XP_032757679 ubiquitin carboxyl-terminal hydrolase 1 protein-coding 625843059 Acly ATP citrate lyase ENCODES a protein that exhibits ATP citrate synthase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA metabolic process (ortholog); acyl-CoA biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH congestive heart failure (ortholog); hepatocellular carcinoma (ortholog); obesity (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 59780983 59823393 - 22301074;30032202 116910565 MODEL JAAIVD010000002;XM_032914478;XM_032914479 XP_032770369;XP_032770370 ATP-citrate synthase protein-coding 625843091 Spata3 spermatogenesis associated 3 FOUND IN sperm flagellum (ortholog) 4 158152541 158164838 + 116898250 MODEL JAAIVD010000003;XM_032899600;XM_032899601 XP_032755491;XP_032755492 spermatogenesis-associated protein 3 protein-coding 625843105 LOC116890071 olfactory receptor 12-like 1 214990307 214991254 + 22301074;30032202 116890071 MODEL JAAIVD010000025;XM_032890833 XP_032746724 protein-coding 625843108 LOC116906403 small nucleolar RNA SNORD113/SNORD114 family 7 127249212 127249285 + 116906403 MODEL JAAIVD010000026;XR_004388669 snorna 625843111 LOC116885839 rho guanine nucleotide exchange factor 18-like 16 1272306 1305640 + 116885839 MODEL JAAIVD010000004;XM_032887178 XP_032743069 protein-coding 625843125 Chst2 carbohydrate sulfotransferase 2 ENCODES a protein that exhibits N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); positive regulation of leukocyte tethering or rolling (ortholog); sulfur compound metabolic process (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 8 86865821 86872170 - 22301074;30032202 116907001 MODEL JAAIVD010000027;XM_032909929 XP_032765820 protein-coding 625843131 LOC116883582 histone H4-like 14 42572942 42573259 - 22301074;30032202 116883582 MODEL JAAIVD010000009;XM_032884762 XP_032740653 protein-coding 625843135 Kpna4 karyopherin subunit alpha 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN dopamine secretion (ortholog); gene expression (ortholog); NLS-bearing protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); NLS-dependent protein nuclear import complex (ortholog) 3 86169707 86226079 + 22301074;30032202 116896794 MODEL JAAIVD010000012;XM_032898263 XP_032754154 importin subunit alpha-3 protein-coding 625843156 LOC116895783 glyceraldehyde-3-phosphate dehydrogenase-like 3 55043468 55067491 - 116895783 MODEL JAAIVD010000012 pseudo 625843157 LOC116906171 protein LSM14 homolog A-like 7 103819679 103822829 - 116906171 MODEL JAAIVD010000026 pseudo 625843158 Ern2 endoplasmic reticulum to nucleus signaling 2 ENCODES a protein that exhibits ATP binding (ortholog); endonuclease activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum quality control compartment (ortholog) 2 79642929 79659331 + 22301074;30032202 116891556 MODEL JAAIVD010000001;XM_032892728;XM_032892729 XP_032748619;XP_032748620 serine/threonine-protein kinase/endoribonuclease IRE2 protein-coding 625843186 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 170258382 170258453 - 116890645 MODEL JAAIVD010000025 trna 625843187 LOC116887788 small nucleolar RNA SNORA18 18 27317345 27317475 + 116887788 MODEL JAAIVD010000013;XR_004386284 snorna 625843190 LOC116904573 ovostatin homolog 6 19118445 19160645 + 22301074 116904573 MODEL JAAIVD010000024;XM_032907372 XP_032763263 protein-coding 625843227 Socs7 suppressor of cytokine signaling 7 ENCODES a protein that exhibits phosphorylation-dependent protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); fat cell differentiation (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 56986837 57024993 - 22301074;30032202 116908627 MODEL JAAIVD010000002;XM_032911879 XP_032767770 protein-coding 625843241 LOC116887183 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 18 470081 470515 + 116887183 MODEL JAAIVD010000013 pseudo 625843242 Spag4 sperm associated antigen 4 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN microtubule (ortholog) 5 135426434 135431058 + 30032202 116902194 MODEL JAAIVD010000023;XM_032904558;XM_032904559 XP_032760449;XP_032760450 sperm-associated antigen 4 protein protein-coding 625843261 LOC116889841 28S ribosomal protein L42, mitochondrial 30032202 116889841 MODEL JAAIVD010001822;XM_032890674 XP_032746565 protein-coding 625843262 Ehd1 EH domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); high grade glioma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN ciliary pocket membrane (ortholog); cilium (ortholog); early endosome (ortholog) 2 1388026 1410637 - 22301074;30032202 116890667 MODEL JAAIVD010000001;XM_032891073 XP_032746964 EH domain-containing protein 1 protein-coding 625843271 Dmkn dermokine INVOLVED IN cornified envelope assembly (ortholog); FOUND IN extracellular space (ortholog) 2 165236045 165252000 - 30032202 116894454 MODEL JAAIVD010000001;XM_032896158;XM_032896159;XM_032896160;XM_032896161 XP_032752049;XP_032752050;XP_032752051;XP_032752052 protein-coding 625843298 LOC116889685 elongation factor Tu-like 22301074;30032202 116889685 MODEL JAAIVD010000051;XM_032890573 XP_032746464 protein-coding 625843299 Dsc1 desmocollin 1 INVOLVED IN desmosome maintenance (ortholog); establishment of skin barrier (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH Chronic Periodontitis (ortholog); melanoma (ortholog); FOUND IN desmosome (ortholog) 15 23417776 23443229 + 22301074;30032202 116884690 MODEL JAAIVD010000010;XM_032885873;XM_032885874;XM_032885875;XM_032885876 XP_032741764;XP_032741765;XP_032741766;XP_032741767 desmocollin-1 protein-coding 625843323 Fam163b family with sequence similarity 163 member B 5 9517577 9547857 + 116901243 MODEL JAAIVD010000023;XM_032902993 XP_032758884 protein FAM163B protein-coding 625843330 Pnoc prepronociceptin ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to ethanol (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN synaptic membrane (ortholog) 12 59006224 59033496 + 22301074;30032202 116913822 MODEL JAAIVD010000007;XM_032918134;XM_032918135;XM_032918136 XP_032774025;XP_032774026;XP_032774027 protein-coding 625843344 Tfe3 transcription factor binding to IGHM enhancer 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN humoral immune response (ortholog); lysosome organization (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, SYNDROMIC, WITH PIGMENTARY MOSAICISM AND COARSE FACIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) X 14357966 14370491 - 22301074;30032202 116888741 MODEL JAAIVD010000014;XM_032890034 XP_032745925 transcription factor E3 protein-coding 625843358 Hrg histidine rich glycoprotein ENCODES a protein that exhibits heme binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to fungus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Atherosclerosis (ortholog); hemorrhagic disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 4 7621990 7632672 + 22301074;30032202 116897810 MODEL JAAIVD010000003;XM_032899225 XP_032755116 histidine-rich glycoprotein protein-coding 625843369 LOC116888561 spindlin-2-like X 19291502 19292331 - 22301074;30032202 116888561 MODEL JAAIVD010000014;XM_032889866 XP_032745757 protein-coding 625843374 Inpp5f inositol polyphosphate-5-phosphatase F ENCODES a protein that exhibits inositol monophosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 4-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); clathrin-dependent endocytosis (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) 2 73250815 73329728 - 30032202 116891431 MODEL JAAIVD010000001;XM_032892484;XM_032892485;XM_032892486 XP_032748375;XP_032748376;XP_032748377 phosphatidylinositide phosphatase SAC2 protein-coding 625843404 Tigar TP53 induced glycolysis regulatory phosphatase ENCODES a protein that exhibits fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to hypoxia (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 6 20799726 20814642 + 30032202 116903829 MODEL JAAIVD010000024;XM_032906541 XP_032762432 fructose-2,6-bisphosphatase TIGAR protein-coding 625843414 Psmc2 proteasome 26S subunit, ATPase 2 ENCODES a protein that exhibits general transcription initiation factor binding (ortholog); proteasome-activating activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); P-body (ortholog) 6 151089514 151104003 + 22301074;30032202 116904181 MODEL JAAIVD010000024;XM_032907090 XP_032762981 26S proteasome regulatory subunit 7 protein-coding 625843430 LOC116886667 histone H3.3A-like 17 8089275 8089794 + 22301074;30032202 116886667 MODEL JAAIVD010000011;XM_032888161 XP_032744052 protein-coding 625843435 LOC116885032 small Cajal body-specific RNA 17 15 57217500 57217639 + 116885032 MODEL JAAIVD010000010;XR_004385919 ncrna 625843438 LOC116889165 melanoma-associated antigen 10-like X 124417275 124422624 + 30032202 116889165 MODEL JAAIVD010000014;XM_032890333 XP_032746224 protein-coding 625843446 LOC116886593 dynactin subunit 6-like 17 5581742 5657387 - 116886593 MODEL JAAIVD010000011 pseudo 625843447 LOC116904681 small nucleolar RNA SNORA44 6 53079525 53079655 - 116904681 MODEL JAAIVD010000024;XR_004388379 snorna 625843450 LOC116897637 small Cajal body-specific RNA 7 3 86213578 86213904 + 116897637 MODEL JAAIVD010000012;XR_004387616 ncrna 625843453 Arhgef15 Rho guanine nucleotide exchange factor 15 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of synapse maturation (ortholog); positive regulation of stress fiber assembly (ortholog); regulation of postsynapse assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 9 48541099 48554210 - 22301074;30032202 116910100 MODEL JAAIVD010000002;XM_032913927 XP_032769818 protein-coding 625843474 Nkx6-2 NK6 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system myelination (ortholog); endocrine pancreas development (ortholog); negative regulation of cell fate commitment (ortholog); ASSOCIATED WITH genetic disease (ortholog); spastic ataxia 8 (ortholog); FOUND IN nucleus (ortholog) 2 62275057 62276603 + 22301074;30032202 116891360 MODEL JAAIVD010000001;XM_032892356 XP_032748247 homeobox protein Nkx-6.2 protein-coding 625843481 LOC116900850 40S ribosomal protein S7-like 5 61824229 61827063 - 116900850 MODEL JAAIVD010000023 pseudo 625843482 LOC116887613 HLA class I histocompatibility antigen, alpha chain F-like 18 9711504 9720744 - 116887613 MODEL JAAIVD010000013 pseudo 625843483 LOC116894328 growth factor receptor-bound protein 2-like 2 151697731 151698845 + 116894328 MODEL JAAIVD010000001 pseudo 625843484 Ppef2 protein phosphatase with EF-hand domain 2 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog) 11 5072798 5098579 - 22301074;30032202 116912648 MODEL JAAIVD010000006;XM_032916766 XP_032772657 serine/threonine-protein phosphatase with EF-hands 2 protein-coding 625843503 Casp4 caspase 4 ENCODES a protein that exhibits CARD domain binding (ortholog); cysteine-type endopeptidase activity (ortholog); lipid binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); defense response to bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 8 2175169 2210060 - 22301074;30032202 116907192 MODEL JAAIVD010000027;XM_032910154;XM_032910155;XR_004388809 XP_032766045;XP_032766046 caspase-4 protein-coding 625843521 LOC116885119 small nucleolar RNA SNORA2/SNORA34 family 15 36225631 36225759 + 116885119 MODEL JAAIVD010000010 pseudo 625843522 LOC116885380 cytochrome P450 3A1-like 1 43281079 43316027 + 22301074;30032202 116885380 MODEL JAAIVD010000025;XM_032886661 XP_032742552 protein-coding 625843537 Bmal1 basic helix-loop-helix ARNT like 1 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); bHLH transcription factor binding (ortholog); DNA binding (ortholog); INVOLVED IN autophagy (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN chromatoid body (ortholog); CLOCK-BMAL transcription complex (ortholog); cytoplasm (ortholog) 2 88215187 88280082 - 22301074;30032202 116891641 MODEL JAAIVD010000001;XM_032892855;XM_032892856;XM_032892857;XM_032892858;XM_032892859;XM_032892860 XP_032748746;XP_032748747;XP_032748748;XP_032748749;XP_032748750;XP_032748751 Arntl aryl hydrocarbon receptor nuclear translocator like;aryl hydrocarbon receptor nuclear translocator-like protein 1 protein-coding 625843577 LOC116912058 zinc finger protein 54-like 11 96658411 96688939 - 30032202 116912058 MODEL JAAIVD010000006;XM_032915923 XP_032771814 protein-coding 625843585 LOC116904056 26S proteasome non-ATPase regulatory subunit 1-like 1 142770625 142812345 - 116904056 MODEL JAAIVD010000025 pseudo 625843586 Faf1 Fas associated factor 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); NF-kappaB binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN Fas signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of DNA replication (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear envelope (ortholog) 1 42324655 42660984 + 22301074;30032202 116890141 MODEL JAAIVD010000025;XM_032890912 XP_032746803 FAS-associated factor 1 protein-coding 625843611 LOC116887355 ferritin heavy polypeptide-like 17 18 44996042 44997130 + 22301074;30032202 116887355 MODEL JAAIVD010000013;XM_032888949 XP_032744840 protein-coding 625843615 LOC116905701 glyceraldehyde-3-phosphate dehydrogenase-like 7 20601571 20602575 + 116905701 MODEL JAAIVD010000026 pseudo 625843616 Prg3 proteoglycan 3, pro eosinophil major basic protein 2 INVOLVED IN basophil activation (ortholog); histamine biosynthetic process (ortholog); leukotriene biosynthetic process (ortholog) 5 62357871 62362888 + 22301074;30032202 116900231 MODEL JAAIVD010000023;XM_032901982 XP_032757873 proteoglycan 3 protein-coding 625843625 Fry FRY microtubule binding protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of tubulin deacetylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog); intellectual disability (ortholog) 16 3350452 3588001 - 30032202 116885536 MODEL JAAIVD010000004;XM_032886834 XP_032742725 protein furry homolog protein-coding 625843690 Iqgap2 IQ motif containing GTPase activating protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); calmodulin binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); regulation of actin cytoskeleton organization (ortholog); thrombin-activated receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium (ortholog) 3 200637845 200912264 + 22301074;30032202 116896052 MODEL JAAIVD010000012;XM_032897047 XP_032752938 ras GTPase-activating-like protein IQGAP2 protein-coding 625843727 LOC116913187 ATP synthase F(0) complex subunit C3, mitochondrial-like 12 63154823 63157668 - 116913187 MODEL JAAIVD010000007 pseudo 625843728 LOC116914787 ubiquitin-40S ribosomal protein S27a-like 13 30585427 30586773 + 116914787 MODEL JAAIVD010000008 pseudo 625843729 Hif1an hypoxia inducible factor 1 subunit alpha inhibitor ENCODES a protein that exhibits [protein]-asparagine 3-dioxygenase activity (ortholog); ankyrin repeat binding (ortholog); carboxylic acid binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of myoblast differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 44066280 44080152 + 30032202 116891214 MODEL JAAIVD010000001;XM_032892048 XP_032747939 hypoxia-inducible factor 1-alpha inhibitor protein-coding 625843741 Ccdc157 coiled-coil domain containing 157 ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog) 11 73125209 73143689 - 116912845 MODEL JAAIVD010000006;XM_032917051 XP_032772942 coiled-coil domain-containing protein 157 protein-coding 625843757 LOC116888311 developmental pluripotency-associated protein 4-like X 48163444 48164255 + 116888311 MODEL JAAIVD010000014 pseudo 625843758 LOC116889332 uncharacterized LOC116889332 X 17145460 17147517 + 30032202 116889332 MODEL JAAIVD010000014;XM_032890450 XP_032746341 uncharacterized protein LOC116889332 protein-coding 625843762 Cdkn1c cyclin dependent kinase inhibitor 1C ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein kinase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adrenal gland development (ortholog); camera-type eye development (ortholog); digestive system development (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Beckwith-Wiedemann syndrome (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 6238583 6241274 + 22301074 116890834 MODEL JAAIVD010000001;XM_032891355;XM_032891356;XM_032891357;XM_032891358 XP_032747246;XP_032747247;XP_032747248;XP_032747249 cyclin-dependent kinase inhibitor 1C protein-coding 625843777 Rsf1 remodeling and spacing factor 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); histone binding (ortholog); histone octamer slider activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA-templated transcription initiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RSF complex (ortholog) 2 95902178 96018058 + 30032202 116891704 MODEL JAAIVD010000001;XM_032892968 XP_032748859 protein-coding 625843797 LOC116905573 polyadenylate-binding protein 1-like 7 97130596 97131892 + 116905573 MODEL JAAIVD010000026 pseudo 625843798 Ptdss2 phosphatidylserine synthase 2 ENCODES a protein that exhibits CDP-diacylglycerol-serine O-phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 2 8317419 8341587 - 22301074 116890885 MODEL JAAIVD010000001;XM_032891495;XM_032891496;XM_032891497 XP_032747386;XP_032747387;XP_032747388 protein-coding 625843820 Ttll4 tubulin tyrosine ligase like 4 ENCODES a protein that exhibits protein-glutamic acid ligase activity (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN peptidyl-glutamic acid modification (ortholog); protein polyglutamylation (ortholog); regulation of blastocyst development (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog) 4 148086070 148122439 + 30032202 116899510 MODEL JAAIVD010000003;XM_032901365 XP_032757256 tubulin polyglutamylase TTLL4 protein-coding 625843844 LOC116911892 U6 spliceosomal RNA 10 29141328 29141433 - 116911892 MODEL JAAIVD010000005;XR_004389402 snrna 625843847 LOC116897765 DNA-directed RNA polymerase II subunit GRINL1A-like 4 736183 737217 - 22301074;30032202 116897765 MODEL JAAIVD010000003;XM_032899196;XM_032899197 XP_032755087;XP_032755088 protein-coding 625843853 Nrarp NOTCH regulated ankyrin repeat protein INVOLVED IN blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); negative regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog) 5 12002334 12004896 - 22301074;30032202 116901321 MODEL JAAIVD010000023;XM_032903134 XP_032759025 notch-regulated ankyrin repeat-containing protein protein-coding 625843858 LOC116899290 glyceraldehyde-3-phosphate dehydrogenase-like 1 103144136 103144532 + 116899290 MODEL JAAIVD010000025 pseudo 625843859 Brms1l BRMS1 like transcriptional repressor 7 69215367 69247454 + 30032202 116905065 MODEL JAAIVD010000026;XM_032907768 XP_032763659 breast cancer metastasis-suppressor 1-like protein protein-coding 625843873 LOC116893909 60S ribosomal protein L13-like 2 76951102 76951732 - 116893909 MODEL JAAIVD010000001 pseudo 625843874 LOC116896485 myomegalin 3 59420730 59617156 + 22301074 116896485 MODEL JAAIVD010000012;XM_032897650 XP_032753541 protein-coding 625843925 LOC116909407 hemoglobin subunit alpha-like 9 3565561 3566407 - 22301074;30032202 116909407 MODEL JAAIVD010000002;XM_032912974 XP_032768865 protein-coding 625843932 Crot carnitine O-octanoyltransferase ENCODES a protein that exhibits carnitine O-octanoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); coenzyme A metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN peroxisome (ortholog) 6 140816792 140848807 - 30032202 116904145 MODEL JAAIVD010000024;XM_032907040;XM_032907041;XM_032907042 XP_032762931;XP_032762932;XP_032762933 peroxisomal carnitine O-octanoyltransferase protein-coding 625843961 Kif22 kinesin family member 22 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic metaphase chromosome alignment (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); spondyloepimetaphyseal dysplasia with joint laxity type 2 (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); mitotic spindle (ortholog) 2 74852172 74865678 + 22301074;30032202 116891489 MODEL JAAIVD010000001;XM_032892593 XP_032748484 kinesin-like protein KIF22 protein-coding 625843979 LOC116886937 eukaryotic translation initiation factor 3 subunit G-like 18 23003140 23004058 + 116886937 MODEL JAAIVD010000013 pseudo 625843980 LOC116889875 uncharacterized LOC116889875 1 155727117 155728573 + 30032202 116889875 MODEL JAAIVD010000025;XM_032890700 XP_032746591 uncharacterized protein LOC116889875 protein-coding 625843986 Lpar2 lysophosphatidic acid receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of Rho protein signal transduction (ortholog); FOUND IN cell surface (ortholog); endocytic vesicle (ortholog); glutamatergic synapse (ortholog) 13 12084722 12089667 + 22301074 116914905 MODEL JAAIVD010000008;XM_032919345 XP_032775236 protein-coding 625843993 LOC116890734 stimulated by retinoic acid gene 6 protein-like 1 620783 661027 - 22301074;30032202 116890734 MODEL JAAIVD010000025;XM_032891193 XP_032747084 protein-coding 625844015 Kdelr2 KDEL endoplasmic reticulum protein retention receptor 2 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN maintenance of protein localization in endoplasmic reticulum (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 21 (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) 16 9724803 9742963 - 22301074;30032202 116885346 MODEL JAAIVD010000004;XM_032886621;XM_032886622 XP_032742512;XP_032742513 ER lumen protein-retaining receptor 2 protein-coding 625844028 Lax1 lymphocyte transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell activation (ortholog); immune response (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 10 1999452 2010173 + 22301074;30032202 116911315 MODEL JAAIVD010000005;XM_032915230 XP_032771121 lymphocyte transmembrane adapter 1 protein-coding 625844038 LOC116906498 U2 spliceosomal RNA 7 52855738 52855913 + 116906498 MODEL JAAIVD010000026 pseudo 625844039 LOC116907184 nucleolysin TIAR-like 8 1557434 1558222 - 116907184 MODEL JAAIVD010000027 pseudo 625844040 LOC116908110 zinc finger protein 345-like 8 16751492 16759691 + 30032202 116908110 MODEL JAAIVD010000027;XM_032911390;XM_032911391 XP_032767281;XP_032767282 protein-coding 625844052 Cfap418 cilia and flagella associated protein 418 INVOLVED IN photoreceptor cell morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 21 (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 16 (ortholog); FOUND IN ciliary base (ortholog); cytoplasm (ortholog); photoreceptor inner segment (ortholog) 1 132796044 132814729 - 30032202 116903472 MODEL JAAIVD010000025;XM_032906042;XM_032906049 XP_032761933;XP_032761940 C1H8orf37 chromosome 1 C8orf37 homolog;protein C8orf37 homolog protein-coding 625844064 Dyrk2 dual specificity tyrosine phosphorylation regulated kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 196815645 196828812 - 22301074;30032202 116909378 MODEL JAAIVD010000025;XM_032912935 XP_032768826 dual specificity tyrosine-phosphorylation-regulated kinase 2 protein-coding 625844071 Ptchd1 patched domain containing 1 INVOLVED IN cognition (ortholog); excitatory chemical synaptic transmission (ortholog); inhibitory chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); plasma membrane (ortholog); synapse (ortholog) X 34543288 34598627 - 30032202 116888542 MODEL JAAIVD010000014;XM_032889853 XP_032745744 patched domain-containing protein 1 protein-coding 625844078 Casz1 castor zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of amacrine cell differentiation (ortholog); negative regulation of glial cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); chromosome 1p36 deletion syndrome (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 11819391 11870936 - 30032202 116892709 MODEL JAAIVD010000025;XM_032894574 XP_032750465 zinc finger protein castor homolog 1 protein-coding 625844101 LOC116884348 G2/mitotic-specific cyclin-B2-like 15 34626127 34627986 - 116884348 MODEL JAAIVD010000010 pseudo 625844102 Neurl2 neuralized E3 ubiquitin protein ligase 2 INVOLVED IN myofibril assembly (ortholog); sarcomere organization (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN muscle tendon junction (ortholog); VCB complex (ortholog) 5 153125596 153128328 + 22301074;30032202 116902343 MODEL JAAIVD010000023;XM_032904825 XP_032760716 neuralized-like protein 2 protein-coding 625844108 LOC116894727 serine/threonine-protein kinase PAK 1-like 2 42087154 42089575 - 116894727 MODEL JAAIVD010000001 pseudo 625844109 LOC116914327 60S ribosomal protein L7-like 13 45887755 45893334 - 116914327 MODEL JAAIVD010000008 pseudo 625844110 LOC116910362 uncharacterized LOC116910362 9 74152568 74167868 - 116910362 MODEL JAAIVD010000002;XM_032914214 XP_032770105 uncharacterized protein LOC116910362 protein-coding 625844121 LOC116899805 small nucleolar RNA SNORA63 4 7902103 7902231 + 116899805 MODEL JAAIVD010000003;XR_004387807 snorna 625844124 Polr1b RNA polymerase I subunit B ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); zinc ion binding (ortholog); INVOLVED IN embryo implantation (ortholog); nucleologenesis (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Mandibulofacial Dysostosis (ortholog); Treacher Collins syndrome (ortholog); Treacher Collins syndrome 4 (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); fibrillar center (ortholog) 5 107871216 107894762 + 22301074;30032202 116901955 MODEL JAAIVD010000023;XM_032904192 XP_032760083 DNA-directed RNA polymerase I subunit RPA2 protein-coding 625844143 Stat1 signal transducer and activator of transcription 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blood circulation (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH angiomyolipoma (ortholog); Brain Injuries (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) 4 123267793 123306466 - 30032202 116899374 MODEL JAAIVD010000003;XM_032901090 XP_032756981 signal transducer and activator of transcription 1-alpha/beta protein-coding 625844172 Barhl1 BarH like homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN midbrain development (ortholog); negative regulation of neuron apoptotic process (ortholog); negative regulation of outer hair cell apoptotic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hearing Loss (ortholog); high grade glioma (ortholog); FOUND IN nucleus (ortholog) 5 7756803 7764300 + 22301074;30032202 116901222 MODEL JAAIVD010000023;XM_032902947 XP_032758838 barH-like 1 homeobox protein protein-coding 625844179 LOC116900131 olfactory receptor 3 5 14518505 14519446 - 22301074;30032202 116900131 MODEL JAAIVD010000023;XM_032901904 XP_032757795 protein-coding 625844182 Eva1b eva-1 homolog B 1 32140911 32142471 - 116896680 MODEL JAAIVD010000025;XM_032898065;XM_032898078;XM_032898086;XM_032898095;XR_004387356 XP_032753956;XP_032753969;XP_032753977;XP_032753986 protein eva-1 homolog B protein-coding 625844203 Pdcl2 phosducin like 2 INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 33050233 33070264 - 30032202 116912351 MODEL JAAIVD010000006;XM_032916405 XP_032772296 phosducin-like protein 2 protein-coding 625844213 Fam83b family with sequence similarity 83 member B ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase catalytic subunit binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); INVOLVED IN cell population proliferation (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 8 70753567 70805257 - 30032202 116907493 MODEL JAAIVD010000027;XM_032910485 XP_032766376 protein FAM83B protein-coding 625844221 LOC116891950 uncharacterized LOC116891950 2 121197611 121226518 + 116891950 MODEL JAAIVD010000001;XR_004386874;XR_004386875 ncrna 625844229 LOC116893271 sperm motility kinase X-like 2 143819929 143820983 + 116893271 MODEL JAAIVD010000001 pseudo 625844230 Ppp1r36 protein phosphatase 1 regulatory subunit 36 ASSOCIATED WITH autistic disorder (ortholog) 7 90574185 90594005 + 22301074;30032202 116905183 MODEL JAAIVD010000026;XM_032907967 XP_032763858 protein-coding 625844245 Ly6d lymphocyte antigen 6 family member D INVOLVED IN lymphocyte differentiation (ortholog); response to stilbenoid (ortholog); FOUND IN cell surface (ortholog) 1 247500793 247502327 - 30032202 116890133 MODEL JAAIVD010000025;XM_032890870 XP_032746761 lymphocyte antigen 6D protein-coding 625844252 Marveld1 MARVEL domain containing 1 ASSOCIATED WITH COVID-19 (ortholog); disease of cellular proliferation (ortholog) 2 41257123 41261725 + 22301074;30032202 116893071 MODEL JAAIVD010000001;XM_032895029 XP_032750920 MARVEL domain-containing protein 1 protein-coding 625844258 Grin3a glutamate ionotropic receptor NMDA type subunit 3A ENCODES a protein that exhibits calcium channel activity (ortholog); glutamate-gated receptor activity (ortholog); glycine binding (ortholog); INVOLVED IN calcium ion transport (ortholog); dendrite development (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH impotence (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 7 57041420 57234313 + 22301074;30032202 116904994 MODEL JAAIVD010000026;XM_032907677;XM_032907678;XM_032907679 XP_032763568;XP_032763569;XP_032763570 glutamate receptor ionotropic, NMDA 3A protein-coding 625844275 LOC116893566 60S ribosomal protein L10a-like 2 217772833 217773535 - 22301074 116893566 MODEL JAAIVD010000001;XM_032895272 XP_032751163 protein-coding 625844278 LOC116905267 40S ribosomal protein S25-like 7 51035754 51036130 + 116905267 MODEL JAAIVD010000026 pseudo 625844279 Asb1 ankyrin repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male genitalia development (ortholog); protein ubiquitination (ortholog); FOUND IN ubiquitin ligase complex (ortholog) 4 163526328 163542123 + 22301074;30032202 116899643 MODEL JAAIVD010000003;XM_032901644;XM_032901645 XP_032757535;XP_032757536 ankyrin repeat and SOCS box protein 1 protein-coding 625844292 Mtcl2 microtubule crosslinking factor 2 INVOLVED IN chromosome segregation (ortholog); insulin receptor signaling pathway (ortholog); negative regulation of gluconeogenesis (ortholog); FOUND IN extracellular space (ortholog); microtubule (ortholog); midbody (ortholog) 5 136350615 136418522 - 22301074;30032202 116902216 MODEL JAAIVD010000023;XM_032904619 XP_032760510 Soga1 protein SOGA1;suppressor of glucose, autophagy associated 1 protein-coding 625844311 LOC116900663 60S ribosomal protein L18-like 5 126587233 126587804 - 116900663 MODEL JAAIVD010000023 pseudo 625844312 LOC116887447 selection and upkeep of intraepithelial T-cells protein 7-like 1 44563192 44571629 + 30032202 116887447 MODEL JAAIVD010000025;XM_032889058 XP_032744949 protein-coding 625844320 LOC116900675 cystatin-9-like 5 128376249 128379073 + 22301074;30032202 116900675 MODEL JAAIVD010000023;XM_032902380 XP_032758271 protein-coding 625844327 Timm8a translocase of inner mitochondrial membrane 8A ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); protein targeting to mitochondrion (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); Auditory Neuropathy (ortholog); deafness-dystonia-optic neuronopathy syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog); mitochondrion (ortholog) X 86843307 86847478 - 116888954 MODEL JAAIVD010000014;XM_032890182 XP_032746073 mitochondrial import inner membrane translocase subunit Tim8 A protein-coding 625844333 LOC116888904 eukaryotic translation initiation factor 5-like X 99860498 99861998 - 22301074;30032202 116888904 MODEL JAAIVD010000014;XM_032890162 XP_032746053 protein-coding 625844338 Gucy2c guanylate cyclase 2C ENCODES a protein that exhibits guanylate cyclase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Colorectal Neoplasms (ortholog); congenital diarrhea 6 (ortholog) 6 12683005 12760992 + 22301074;30032202 116903154 MODEL JAAIVD010000024;XM_032905518 XP_032761409 heat-stable enterotoxin receptor protein-coding 625844369 Ripk3 receptor interacting serine/threonine kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); amyloid fibril formation (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); avian influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 12 69214912 69218677 + 22301074;30032202 116913783 MODEL JAAIVD010000007;XM_032918089 XP_032773980 receptor-interacting serine/threonine-protein kinase 3 protein-coding 625844382 LOC116907651 microtubule-associated protein 4 8 100546833 100642999 + 30032202 116907651 MODEL JAAIVD010000027;XM_032910739;XM_032910740;XM_032910741 XP_032766630;XP_032766631;XP_032766632 protein-coding 625844402 Fgf3 fibroblast growth factor 3 INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of cardiac muscle tissue development (ortholog); organ induction (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Breast Neoplasms (ortholog); cleft lip (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 2 4891468 4895673 - 22301074;30032202 116893611 MODEL JAAIVD010000001;XM_032895318 XP_032751209 protein-coding 625844409 Steep1 STING1 ER exit protein 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); endoplasmic reticulum membrane organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 107 (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); cytoplasm (ortholog) X 103031032 103042325 - 116889351 MODEL JAAIVD010000014;XM_032890461 XP_032746352 CXHXorf56 UPF0428 protein CXorf56 homolog;chromosome X CXorf56 homolog protein-coding 625844420 Asb16 ankyrin repeat and SOCS box containing 16 9 61565892 61572000 + 22301074;30032202 116910244 MODEL JAAIVD010000002;XM_032914131 XP_032770022 ankyrin repeat and SOCS box protein 16 protein-coding 625844428 LOC116889200 60S ribosomal protein L35-like X 51558167 51558563 + 116889200 MODEL JAAIVD010000014 pseudo 625844429 Vps54 VPS54 subunit of GARP complex INVOLVED IN apoptotic DNA fragmentation (ortholog); astrocyte differentiation (ortholog); cellular response to progesterone stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Nerve Degeneration (ortholog); tooth agenesis (ortholog); FOUND IN cytoplasm (ortholog); GARP complex (ortholog); Golgi apparatus (ortholog) 11 89428683 89504206 + 22301074;30032202 116912431 MODEL JAAIVD010000006;XM_032916499 XP_032772390 vacuolar protein sorting-associated protein 54 protein-coding 625844455 LOC116885601 40S ribosomal protein S13-like 16 19061764 19062326 + 116885601 MODEL JAAIVD010000004 pseudo 625844456 Gpr65 G protein-coupled receptor 65 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) 7 111442599 111444521 + 22301074 116905853 MODEL JAAIVD010000026;XM_032908830 XP_032764721 psychosine receptor protein-coding 625844461 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92691004 92691075 + 116904836 MODEL JAAIVD010000024 trna 625844462 LOC116907366 olfactory receptor 143-like 8 32167141 32168094 + 22301074;30032202 116907366 MODEL JAAIVD010000027;XM_032910317 XP_032766208 protein-coding 625844466 Cnksr2 connector enhancer of kinase suppressor of Ras 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); postsynapse organization (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) X 36461492 36688780 + 22301074 116887830 MODEL JAAIVD010000014;XM_032889343 XP_032745234 protein-coding 625844491 LOC116889106 BTB/POZ domain-containing protein 10-like X 90355848 90357145 - 22301074;30032202 116889106 MODEL JAAIVD010000014;XM_032890272 XP_032746163 protein-coding 625844495 Prelid3b PRELI domain containing 3B FOUND IN mitochondrion (ortholog) 5 143506126 143514150 + 30032202 116902263 MODEL JAAIVD010000023;XM_032904683 XP_032760574 PRELI domain containing protein 3B protein-coding 625844505 Prdm10 PR/SET domain 10 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Birt-Hogg-Dube syndrome (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) 8 27002378 27103109 + 30032202 116906633 MODEL JAAIVD010000027;XM_032909393;XM_032909394 XP_032765284;XP_032765285 PR domain zinc finger protein 10 protein-coding 625844532 LOC116893066 cytochrome P450 2C6-like 2 38843396 38851537 + 116893066 MODEL JAAIVD010000001 pseudo 625844533 LOC116913283 elongation factor Tu, mitochondrial-like 12 87632218 87633584 - 116913283 MODEL JAAIVD010000007 pseudo 625844534 Syn2 synapsin II ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle clustering (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 6 31427870 31542973 - 22301074;30032202 116903386 MODEL JAAIVD010000024;XM_032905883 XP_032761774 synapsin-2 protein-coding 625844551 LOC116887628 olfactory receptor 11A1-like 18 10409057 10409624 - 116887628 MODEL JAAIVD010000013 pseudo 625844552 Plekhh2 pleckstrin homology, MyTH4 and FERM domain containing H2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of actin filament depolymerization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 8291196 8395806 - 22301074;30032202 116905779 MODEL JAAIVD010000026;XM_032908753 XP_032764644 pleckstrin homology domain-containing family H member 2 protein-coding 625844586 LOC116904668 small nucleolar RNA SNORA72 6 157806357 157806484 - 116904668 MODEL JAAIVD010000024;XR_004388368 snorna 625844589 LOC116895510 serine/arginine-rich splicing factor 3-like 3 113412735 113413320 + 116895510 MODEL JAAIVD010000012 pseudo 625844590 LOC116890328 U6 spliceosomal RNA 1 17062487 17062593 - 116890328 MODEL JAAIVD010000025;XR_004386551 snrna 625844593 Srrm3 serine/arginine repetitive matrix 3 16 18149174 18189841 - 30032202 116885236 MODEL JAAIVD010000004;XM_032886475;XM_032886476 XP_032742366;XP_032742367 serine/arginine repetitive matrix protein 3 protein-coding 625844617 Nyap1 neuronal tyrosine phosphorylated phosphoinositide-3-kinase adaptor 1 INVOLVED IN neuron projection morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) 16 16282132 16293479 + 30032202 116885472 MODEL JAAIVD010000004;XM_032886754 XP_032742645 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adapter 1 protein-coding 625844628 Siglec1 sialic acid binding Ig like lectin 1 ENCODES a protein that exhibits virion binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); clathrin-dependent endocytosis of virus by host cell (ortholog); negative regulation of phagocytosis (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN early endosome (ortholog); endocytic vesicle (ortholog); late endosome (ortholog) 5 110804315 110823391 - 116900638 MODEL JAAIVD010000023;XM_032902350 XP_032758241 sialoadhesin protein-coding 625844652 LOC116888397 claudin-34-like X 36839482 36840117 - 30032202 116888397 MODEL JAAIVD010000014;XM_032889674 XP_032745565 protein-coding 625844655 Tslp thymic stromal lymphopoietin ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-7 receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Albuminuria (ortholog); allergic contact dermatitis (ortholog); allergic disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 15 11440205 11445795 - 22301074;30032202 116884921 MODEL JAAIVD010000010;XM_032886143 XP_032742034 protein-coding 625844663 C3H1orf54 chromosome 3 C1orf54 homolog INVOLVED IN epithelial cell proliferation involved in renal tubule morphogenesis (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to wounding (ortholog) 3 61397518 61407431 + 116896532 MODEL JAAIVD010000012;XM_032897712;XM_032897713 XP_032753603;XP_032753604 uncharacterized protein C1orf54 homolog protein-coding 625844678 Srgn serglycin ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN granzyme-mediated programmed cell death signaling pathway (ortholog); maintenance of granzyme B location in T cell secretory granule (ortholog); maintenance of protease location in mast cell secretory granule (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 18 28323067 28343154 - 30032202 116887033 MODEL JAAIVD010000013;XM_032888525 XP_032744416 protein-coding 625844687 Spn sialophorin ENCODES a protein that exhibits heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); chronic inflammatory response (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); calcinosis (ortholog); Experimental Arthritis (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); cleavage furrow (ortholog) 2 74744429 74755537 + 30032202 116893898 MODEL JAAIVD010000001;XM_032895620;XM_032895621 XP_032751511;XP_032751512 leukosialin protein-coding 625844695 Dele1 DAP3 binding cell death enhancer 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to stress (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) 15 6665118 6678217 - 22301074 116884501 MODEL JAAIVD010000010;XM_032885631;XM_032885632 XP_032741522;XP_032741523 death ligand signal enhancer protein-coding 625844713 Pptc7 protein phosphatase targeting COQ7 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); negative regulation of mitophagy (ortholog); positive regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 31525594 31564035 - 116885806 MODEL JAAIVD010000004;XM_032887139 XP_032743030 protein phosphatase PTC7 homolog protein-coding 625844723 Rem2 RRAD and GEM like GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog) 12 70518872 70523118 - 22301074;30032202 116913826 MODEL JAAIVD010000007;XM_032918139 XP_032774030 GTP-binding protein REM 2 protein-coding 625844732 Rpl19 ribosomal protein L19 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 9 56354298 56357678 - 22301074;30032202 116909511 MODEL JAAIVD010000002;XM_032913115 XP_032769006 60S ribosomal protein L19 protein-coding 625844742 LOC116888678 forkhead box protein E1 1 99423772 99426586 + 30032202 116888678 MODEL JAAIVD010000025;XM_032889976 XP_032745867 protein-coding 625844747 Hfm1 helicase for meiosis 1 INVOLVED IN resolution of meiotic recombination intermediates (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog) 11 16607398 16689392 - 22301074 116912477 MODEL JAAIVD010000006;XM_032916541 XP_032772432 probable ATP-dependent DNA helicase HFM1 protein-coding 625844789 LOC116907978 zinc finger and SCAN domain containing protein 4F-like 1 158346396 158349552 + 30032202 116907978 MODEL JAAIVD010000025;XM_032911257 XP_032767148 protein-coding 625844795 LOC116895010 small nucleolar RNA SNORA48 2 177749160 177749301 + 116895010 MODEL JAAIVD010000001;XR_004387198 snorna 625844798 Ccdc87 coiled-coil domain containing 87 INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of fertilization (ortholog) 2 2817324 2819923 - 116893596 MODEL JAAIVD010000001;XM_032895299 XP_032751190 coiled-coil domain-containing protein 87 protein-coding 625844802 Kif1b kinesin family member 1B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); kinase binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); anterograde synaptic vesicle transport (ortholog); apoptotic process involved in development (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH adrenal gland pheochromocytoma (ortholog); amyotrophic lateral sclerosis (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrion (ortholog); neuron projection (ortholog) 1 11468855 11599593 + 22301074 116892686 MODEL JAAIVD010000025;XM_032894543 XP_032750434 kinesin-like protein KIF1B protein-coding 625844855 Znf473 zinc finger protein 473 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); negative regulation of transcription initiation by RNA polymerase II (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog) 2 154783729 154802801 + 22301074;30032202 116892195 MODEL JAAIVD010000001;XM_032893726;XM_032893727 XP_032749617;XP_032749618 protein-coding 625844867 LOC116909001 60S ribosomal protein L31 9 16924948 16925390 - 22301074;30032202 116909001 MODEL JAAIVD010000002;XM_032912470 XP_032768361 protein-coding 625844872 LOC116893951 guanylate cyclase 2D 2 96716817 96751571 + 22301074;30032202 116893951 MODEL JAAIVD010000001;XM_032895668 XP_032751559 protein-coding 625844895 Postn periostin ENCODES a protein that exhibits heparin binding (ortholog); metal ion binding (ortholog); INVOLVED IN bone regeneration (ortholog); cell adhesion (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aggressive periodontitis (ortholog); aspirin-induced respiratory disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); neuromuscular junction (ortholog) 3 100025138 100056220 - 22301074 116896874 MODEL JAAIVD010000012;XM_032898416;XM_032898417;XM_032898418;XM_032898419 XP_032754307;XP_032754308;XP_032754309;XP_032754310 protein-coding 625844925 LOC116913861 uncharacterized LOC116913861 12 23966 25415 - 116913861 MODEL JAAIVD010000007 pseudo 625844926 Fkbp8 FKBP prolyl isomerase 8 ENCODES a protein that exhibits calmodulin binding (ortholog); disordered domain specific binding (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate specification (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH clubfoot (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); spina bifida (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 12780672 12787661 + 22301074 116914262 MODEL JAAIVD010000008;XM_032918475;XM_032918476;XM_032918477;XM_032918478;XM_032918479;XM_032918480;XM_032918481 XP_032774366;XP_032774367;XP_032774368;XP_032774369;XP_032774370;XP_032774371;XP_032774372 peptidyl-prolyl cis-trans isomerase FKBP8 protein-coding 625844954 LOC116889254 ADP/ATP translocase 2-like X 73537157 73538045 - 116889254 MODEL JAAIVD010000014 pseudo 625844955 Prr14 proline rich 14 FOUND IN nucleoplasm (ortholog) 2 74424049 74429536 - 30032202 116891473 MODEL JAAIVD010000001;XM_032892572;XM_032892573;XM_032892574 XP_032748463;XP_032748464;XP_032748465 proline-rich protein 14 protein-coding 625844977 LOC116903664 regenerating islet-derived protein 3-alpha 6 67941212 67943985 - 30032202 116903664 MODEL JAAIVD010000024;XM_032906320 XP_032762211 protein-coding 625844987 Ubxn10 UBX domain protein 10 INVOLVED IN cilium assembly (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle B (ortholog) 1 19483689 19489337 + 30032202 116893815 MODEL JAAIVD010000025;XM_032895533 XP_032751424 UBX domain-containing protein 10 protein-coding 625844993 Ms4a2 membrane spanning 4-domains A2 ENCODES a protein that exhibits IgE binding (ortholog); phosphoprotein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytokine production (ortholog); immune response (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) 2 11238992 11245945 + 30032202 116893658 MODEL JAAIVD010000001;XM_032895374;XM_032895375;XM_032895376 XP_032751265;XP_032751266;XP_032751267 high affinity immunoglobulin epsilon receptor subunit beta protein-coding 625845010 LOC116914847 zinc finger protein 844-like 13 20212408 20215033 - 116914847 MODEL JAAIVD010000008;XM_032919300 XP_032775191 protein-coding 625845017 Sumo3 small ubiquitin like modifier 3 ENCODES a protein that exhibits SUMO transferase activity (ortholog); INVOLVED IN positive regulation of ubiquitin-dependent protein catabolic process (ortholog); protein localization to nucleus (ortholog); protein sumoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear body (ortholog); nucleus (ortholog) 18 950517 961210 + 30032202 116887039 MODEL JAAIVD010000013;XM_032888532 XP_032744423 small ubiquitin-related modifier 3 protein-coding 625845025 Ddit3 DNA damage inducible transcript 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); apoptotic process (ortholog); artery development (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Acute-Phase Reaction (ortholog); FOUND IN CHOP-ATF3 complex (ortholog); CHOP-ATF4 complex (ortholog); CHOP-C/EBP complex (ortholog) 1 205725495 205730292 + 30032202 116909986 MODEL JAAIVD010000025;XM_032913772;XM_032913780 XP_032769663;XP_032769671 DNA damage-inducible transcript 3 protein protein-coding 625845036 Slc25a20 solute carrier family 25 member 20 ENCODES a protein that exhibits carnitine:O-acyl-L-carnitine antiporter activity (ortholog); O-acyl-L-carnitine transmembrane transporter activity (ortholog); INVOLVED IN carnitine shuttle (ortholog); carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); carnitine-acylcarnitine translocase deficiency (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 8 99998410 100018298 + 30032202 116907607 MODEL JAAIVD010000027;XM_032910662 XP_032766553 mitochondrial carnitine/acylcarnitine carrier protein protein-coding 625845049 Amhr2 anti-Mullerian hormone receptor type 2 ENCODES a protein that exhibits anti-Mullerian hormone receptor activity (ortholog); hormone binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); female gonad development (ortholog); male gonad development (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); dysgerminoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 1 260626136 260635210 - 22301074;30032202 116883449 MODEL JAAIVD010000025;XM_032884599;XM_032884606;XM_032884614 XP_032740490;XP_032740497;XP_032740505 anti-Muellerian hormone type-2 receptor protein-coding 625845069 Wdr43 WD repeat domain 43 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); regulation of stem cell population maintenance (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 7 21558804 21597710 - 22301074;30032202 116905956 MODEL JAAIVD010000026;XM_032908956 XP_032764847 WD repeat-containing protein 43 protein-coding 625845091 LOC116885306 60S ribosomal protein L39-like 1 2836699 2837932 - 116885306 MODEL JAAIVD010000025 pseudo 625845092 LOC116903451 ubiquitin-conjugating enzyme E2 variant 1-like 6 42380499 42380943 - 116903451 MODEL JAAIVD010000024 pseudo 625845093 Rps8 ribosomal protein S8 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Parkinson's disease (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 1 40777798 40780233 - 22301074;30032202 116898646 MODEL JAAIVD010000025;XM_032899876 XP_032755767 40S ribosomal protein S8 protein-coding 625845103 Tpd52l1 TPD52 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 2 205429322 205544025 - 30032202 116892931 MODEL JAAIVD010000001;XM_032894867;XM_032894868;XM_032894869 XP_032750758;XP_032750759;XP_032750760 tumor protein D53 protein-coding 625845119 Abhd2 abhydrolase domain containing 2, acylglycerol lipase ENCODES a protein that exhibits acetylesterase activity (ortholog); diacylglycerol lipase activity (ortholog); hormone binding (ortholog); INVOLVED IN acrosome reaction (ortholog); acylglycerol catabolic process (ortholog); negative regulation of smooth muscle cell migration (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm plasma membrane (ortholog) 2 120886942 120944564 - 30032202 116891946 MODEL JAAIVD010000001;XM_032893386 XP_032749277 monoacylglycerol lipase ABHD2 protein-coding 625845132 Ar androgen receptor ENCODES a protein that exhibits androgen binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); animal organ formation (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN altered androgen signaling pathway; androgen signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); acute kidney failure (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); cytoplasm (ortholog) X 56136390 56301529 + 22301074;30032202 116888632 MODEL JAAIVD010000014;XM_032889926 XP_032745817 protein-coding 625845144 LOC116907796 uncharacterized LOC116907796 8 66441510 66449714 - 116907796 MODEL JAAIVD010000027;XR_004388847 ncrna 625845152 LOC116908394 small nucleolar RNA SNORA17 8 98490471 98490601 + 116908394 MODEL JAAIVD010000027;XR_004388938 snorna 625845155 LOC116913951 WW domain-binding protein 11-like 12 70154271 70156070 + 30032202 116913951 MODEL JAAIVD010000007;XM_032918216 XP_032774107 protein-coding 625845158 Sap30l SAP30 like ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); non-sequence-specific DNA binding, bending (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN fibrillar center (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) 9 40423441 40430791 - 22301074;30032202 116909142 MODEL JAAIVD010000002;XM_032912628 XP_032768519 histone deacetylase complex subunit SAP30L protein-coding 625845166 LOC116915165 U6 spliceosomal RNA 13 24310500 24310606 - 116915165 MODEL JAAIVD010000008;XR_004389827 snrna 625845169 LOC116888200 tyrosine-protein phosphatase non-receptor type 12-like X 126384592 126386097 - 116888200 MODEL JAAIVD010000014 pseudo 625845170 Ogfr opioid growth factor receptor 5 157690618 157696834 + 22301074;30032202 116902413 MODEL JAAIVD010000023;XM_032904943;XM_032904944 XP_032760834;XP_032760835 protein-coding 625845185 Arl6ip4 ARF like GTPase 6 interacting protein 4 ENCODES a protein that exhibits identical protein binding (ortholog) 16 29747078 29750061 - 116885517 MODEL JAAIVD010000004;XM_032886812 XP_032742703 ADP ribosylation factor like GTPase 6 interacting protein 4;ADP-ribosylation factor-like protein 6-interacting protein 4 protein-coding 625845194 LOC116885091 U1 spliceosomal RNA 15 53451130 53451281 - 116885091 MODEL JAAIVD010000010 pseudo 625845195 LOC116889076 chromobox protein homolog 1-like X 25041334 25043170 + 116889076 MODEL JAAIVD010000014 pseudo 625845196 Nprl2 NPR2 like, GATOR1 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); familial focal epilepsy with variable foci (ortholog); familial focal epilepsy with variable foci 1 (ortholog); FOUND IN GATOR1 complex (ortholog); lysosomal membrane (ortholog) 8 98858335 98861578 + 30032202 116907526 MODEL JAAIVD010000027;XM_032910539 XP_032766430 GATOR complex protein NPRL2 protein-coding 625845211 Ifrd1 interferon related developmental regulator 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcoplasm (ortholog) 7 53429003 53447099 - 30032202 116904988 MODEL JAAIVD010000026;XM_032907670 XP_032763561 interferon-related developmental regulator 1 protein-coding 625845227 Inpp1 inositol polyphosphate-1-phosphatase PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cleft palate (ortholog); retinal disease (ortholog) 4 122505277 122537153 + 22301074;30032202 116899368 MODEL JAAIVD010000003;XM_032901076;XM_032901077;XM_032901078;XM_032901079 XP_032756967;XP_032756968;XP_032756969;XP_032756970 inositol polyphosphate 1-phosphatase protein-coding 625845244 LOC116894921 small nucleolar RNA SNORD15 2 97754009 97754156 - 116894921 MODEL JAAIVD010000001;XR_004387120 snorna 625845247 LOC116895691 uncharacterized LOC116895691 3 204357929 204360209 + 116895691 MODEL JAAIVD010000012;XR_004387301 ncrna 625845252 LOC116898430 ER membrane protein complex subunit 2-like 4 91592916 91593459 - 116898430 MODEL JAAIVD010000003 pseudo 625845253 Inip INTS3 and NABP interacting protein INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of double-strand break (ortholog) 1 91631542 91645441 + 22301074;30032202 116901471 MODEL JAAIVD010000025;XM_032903423;XM_032903432 XP_032759314;XP_032759323 SOSS complex subunit C protein-coding 625845267 LOC116906948 uncharacterized LOC116906948 8 11110738 11111445 + 116906948 MODEL JAAIVD010000027;XR_004388787 ncrna 625845271 LOC116911993 PRAME family member 8-like 11 48608834 48611499 + 22301074;30032202 116911993 MODEL JAAIVD010000006;XM_032915898 XP_032771789 protein-coding 625845276 LOC116904759 small nucleolar RNA SNORA17 6 113064774 113064904 + 116904759 MODEL JAAIVD010000024;XR_004388435 snorna 625845279 LOC116899724 zinc finger protein 431-like 4 182318898 182334129 + 22301074 116899724 MODEL JAAIVD010000003;XM_032901764 XP_032757655 protein-coding 625845285 LOC116906050 40S ribosomal protein SA-like 7 46845603 46887828 - 116906050 MODEL JAAIVD010000026 pseudo 625845286 LOC116908891 40S ribosomal protein S15-like 9 50931426 50931907 - 22301074;30032202 116908891 MODEL JAAIVD010000002;XM_032912339 XP_032768230 protein-coding 625845291 Klhl42 kelch like family member 42 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein polyubiquitination (ortholog); regulation of microtubule-based process (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) 6 4756344 4775114 + 22301074 116903101 MODEL JAAIVD010000024;XM_032905425 XP_032761316 kelch-like protein 42 protein-coding 625845298 Tlr6 toll like receptor 6 ENCODES a protein that exhibits diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); lipopeptide binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); receptor complex (ortholog) 11 21952804 21960343 - 22301074;30032202 116912545 MODEL JAAIVD010000006;XM_032916647 XP_032772538 toll-like receptor 6 protein-coding 625845304 Atp6v1g1 ATPase H+ transporting V1 subunit G1 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN ATPase complex (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 1 90032563 90038724 - 22301074;30032202 116901252 MODEL JAAIVD010000025;XM_032903009 XP_032758900 V-type proton ATPase subunit G 1 protein-coding 625845311 Clec12b C-type lectin domain family 12 member B ENCODES a protein that exhibits protein phosphatase binding (ortholog); signaling receptor inhibitor activity (ortholog); INVOLVED IN melanocyte proliferation (ortholog); natural killer cell inhibitory signaling pathway (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 6 18210717 18221743 + 30032202 116904566 MODEL JAAIVD010000024;XM_032907364 XP_032763255 protein-coding 625845321 LOC116895948 pre-mRNA-splicing factor 38A-like 3 136094644 136095524 - 116895948 MODEL JAAIVD010000012 pseudo 625845322 LOC116914614 60S ribosomal protein L27a-like 1 190388848 190396036 + 116914614 MODEL JAAIVD010000025 pseudo 625845323 Lpin2 lipin 2 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Majeed Syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 4 180645604 180719326 + 30032202 116899715 MODEL JAAIVD010000003;XM_032901755;XM_032901756;XM_032901757;XM_032901758 XP_032757646;XP_032757647;XP_032757648;XP_032757649 phosphatidate phosphatase LPIN2 protein-coding 625845355 LOC116913746 60S ribosomal protein L27-like 12 61615843 61616277 + 22301074;30032202 116913746 MODEL JAAIVD010000007;XM_032918054 XP_032773945 protein-coding 625845360 Tent2 terminal nucleotidyltransferase 2 ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN dark adaptation (ortholog); hematopoietic progenitor cell differentiation (ortholog); hippocampus development (ortholog); FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); perforant pathway to dendrate granule cell synapse (ortholog) 3 203136083 203181797 + 30032202 116897294 MODEL JAAIVD010000012;XM_032899026;XM_032899027;XM_032899029 XP_032754917;XP_032754918;XP_032754920 poly(A) RNA polymerase GLD2 protein-coding 625845386 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60800244 60800315 + 116897674 MODEL JAAIVD010000012 trna 625845387 Ewsr1 EWS RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Ewing sarcoma (ortholog); Neoplastic Processes (ortholog); FOUND IN Cajal body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 11 74046921 74075128 - 22301074;30032202 116912837 MODEL JAAIVD010000006;XM_032917024;XM_032917025;XM_032917026;XM_032917027;XM_032917028 XP_032772915;XP_032772916;XP_032772917;XP_032772918;XP_032772919 RNA-binding protein EWS protein-coding 625845420 LOC116909182 uncharacterized LOC116909182 9 51392433 51400728 - 116909182 MODEL JAAIVD010000002;XR_004389054;XR_004389055 ncrna 625845427 LOC116894993 small nucleolar RNA SNORA32 2 222015338 222015460 - 116894993 MODEL JAAIVD010000001;XR_004387184 snorna 625845430 Pak5 p21 (RAC1) activated kinase 5 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN learning (ortholog); locomotory behavior (ortholog); memory (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear membrane (ortholog) 5 115714765 115905362 - 22301074;30032202 116902017 MODEL JAAIVD010000023;XM_032904288 XP_032760179 serine/threonine-protein kinase PAK 5 protein-coding 625845444 LOC116914848 glyceraldehyde-3-phosphate dehydrogenase-like 13 33050928 33052043 + 116914848 MODEL JAAIVD010000008 pseudo 625845445 Atp6v1d ATPase H+ transporting V1 subunit D INVOLVED IN cilium assembly (ortholog); protein localization to cilium (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 7 92957034 92972752 - 22301074;30032202 116905198 MODEL JAAIVD010000026;XM_032907994 XP_032763885 V-type proton ATPase subunit D protein-coding 625845458 LOC116908933 keratin-associated protein 2-1 9 54442576 54442968 - 22301074 116908933 MODEL JAAIVD010000002;XM_032912390 XP_032768281 protein-coding 625845461 Agk acylglycerol kinase ENCODES a protein that exhibits acylglycerol kinase activity (ortholog); ATP-dependent diacylglycerol kinase activity (ortholog); ceramide kinase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); lipid phosphorylation (ortholog); protein insertion into mitochondrial inner membrane (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 38 (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 6 99409395 99483160 - 30032202 116903918 MODEL JAAIVD010000024;XM_032906690 XP_032762581 acylglycerol kinase, mitochondrial protein-coding 625845481 Ppp1r15a protein phosphatase 1 regulatory subunit 15A ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); protein kinase binding (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Amaurosis Fugax (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 2 153986308 153989424 + 30032202 116892144 MODEL JAAIVD010000001;XM_032893634 XP_032749525 protein-coding 625845488 LOC116899001 uncharacterized LOC116899001 4 53396279 53408506 + 116899001 MODEL JAAIVD010000003;XR_004387679;XR_004387680 ncrna 625845496 LOC116893677 olfactory receptor 5AN1-like 2 12322647 12323585 + 22301074;30032202 116893677 MODEL JAAIVD010000001;XM_032895394 XP_032751285 protein-coding 625845499 LOC116885956 40S ribosomal protein S29-like 16 21119805 21119978 - 116885956 MODEL JAAIVD010000004 pseudo 625845500 Tcea3 transcription elongation factor A3 PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleus (ortholog) 1 21957730 21990441 - 22301074;30032202 116894401 MODEL JAAIVD010000025;XM_032896111 XP_032752002 transcription elongation factor A protein 3 protein-coding 625845515 LOC116894911 U7 small nuclear RNA 2 111075072 111075131 + 116894911 MODEL JAAIVD010000001;XR_004387113 snrna 625845518 Kcnt2 potassium sodium-activated channel subfamily T member 2 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); developmental and epileptic encephalopathy 57 (ortholog); epilepsy (ortholog); FOUND IN plasma membrane (ortholog) 10 20506211 20773224 + 22301074;30032202 116911591 MODEL JAAIVD010000005;XM_032915567 XP_032771458 potassium channel subfamily T member 2 protein-coding 625845544 LOC116909567 olfactory receptor 2W3-like 9 39378644 39379627 - 22301074 116909567 MODEL JAAIVD010000002;XM_032913185 XP_032769076 protein-coding 625845547 Dffa DNA fragmentation factor subunit alpha ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); protein domain specific binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN negative regulation of apoptotic DNA fragmentation (ortholog); negative regulation of deoxyribonuclease activity (ortholog); negative regulation of execution phase of apoptosis (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) 1 11657463 11670523 - 22301074;30032202 116892693 MODEL JAAIVD010000025;XM_032894553 XP_032750444 protein-coding 625845557 LOC116893273 alcohol sulfotransferase A-like 2 143840322 143969769 + 22301074;30032202 116893273 MODEL JAAIVD010000001;XM_032895120 XP_032751011 protein-coding 625845570 LOC116902793 gamma-aminobutyric acid receptor-associated protein-like 2 6 77768143 77768626 - 30032202 116902793 MODEL JAAIVD010000024;XM_032905130 XP_032761021 protein-coding 625845575 Mpc1l mitochondrial pyruvate carrier 1 like INVOLVED IN pyruvate import into mitochondria (ortholog); FOUND IN mitochondrial inner membrane (ortholog) X 8733158 8734061 - 22301074 116888989 MODEL JAAIVD010000014;XM_032890207 XP_032746098 mitochondrial pyruvate carrier 1-like protein protein-coding 625845580 LOC116910451 olfactory receptor 6C6-like 1 161658870 161659823 - 116910451 MODEL JAAIVD010000025 pseudo 625845581 Gsap gamma-secretase activating protein ENCODES a protein that exhibits amyloid-beta binding (ortholog); INVOLVED IN positive regulation of amyloid-beta formation (ortholog); regulation of proteolysis (ortholog); FOUND IN trans-Golgi network (ortholog) 6 150469661 150563594 + 30032202 116904170 MODEL JAAIVD010000024;XM_032907071 XP_032762962 gamma-secretase-activating protein protein-coding 625845618 LOC116912749 ATP-binding cassette sub-family G member 3-like 11 14693856 14728837 + 116912749 MODEL JAAIVD010000006;XR_004389476 pseudo 625845636 LOC116895910 TD and POZ domain-containing protein 2-like 3 120717018 120717699 - 116895910 MODEL JAAIVD010000012 pseudo 625845637 LOC116897583 small nucleolar RNA SNORA17 3 98327961 98328089 - 116897583 MODEL JAAIVD010000012;XR_004387589 snorna 625845640 Acan aggrecan ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cellular response to growth factor stimulus (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Brain Injuries (ortholog); congestive heart failure (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 2 121135373 121168301 - 22301074 116891949 MODEL JAAIVD010000001;XM_032893390 XP_032749281 aggrecan core protein protein-coding 625845660 LOC116907108 phosphoglycerate kinase 1-like 8 1309658 1310900 - 22301074;30032202 116907108 MODEL JAAIVD010000027;XM_032910076 XP_032765967 protein-coding 625845663 LOC116890344 U6 spliceosomal RNA 1 190845323 190845426 + 116890344 MODEL JAAIVD010000025;XR_004386566 snrna 625845666 Ch25h cholesterol 25-hydroxylase ENCODES a protein that exhibits cholesterol 25-hydroxylase activity (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol metabolic process (ortholog); negative regulation of cholesterol metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway 2 34108766 34110300 - 22301074;30032202 116893781 MODEL JAAIVD010000001;XM_032895484 XP_032751375 protein-coding 625845671 Oxsm 3-oxoacyl-ACP synthase, mitochondrial ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); medium-chain fatty acid biosynthetic process (ortholog); short-chain fatty acid biosynthetic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 12 85613367 85616693 - 22301074;30032202 116913680 MODEL JAAIVD010000007;XM_032917968;XM_032917969 XP_032773859;XP_032773860 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial protein-coding 625845681 LOC116897286 small nuclear ribonucleoprotein-associated protein N-like 3 202155924 202156807 - 116897286 MODEL JAAIVD010000012 pseudo 625845682 Fasn fatty acid synthase ENCODES a protein that exhibits (3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activity (ortholog); 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); [acyl-carrier-protein] S-acetyltransferase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to interleukin-4 (ortholog); epithelial cell development (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glycogen granule (ortholog) 9 63208861 63226963 + 22301074;30032202 116909856 MODEL JAAIVD010000002;XM_032913583 XP_032769474 protein-coding 625845729 Nrk Nik related kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); parturition (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog) X 91416192 91509624 + 22301074 116889163 MODEL JAAIVD010000014;XM_032890331 XP_032746222 nik-related protein kinase protein-coding 625845760 Unc13b unc-13 homolog B ENCODES a protein that exhibits calmodulin binding (ortholog); GTP-dependent protein binding (ortholog); syntaxin binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN calyx of Held (ortholog); cytosol (ortholog); early phagosome (ortholog) 1 3237871 3320818 - 22301074;30032202 116891132 MODEL JAAIVD010000025;XM_032891862;XM_032891871;XM_032891880;XM_032891890;XM_032891899;XM_032891909;XM_032891920 XP_032747753;XP_032747762;XP_032747771;XP_032747781;XP_032747790;XP_032747800;XP_032747811 protein unc-13 homolog B protein-coding 625845814 LOC116886051 small nuclear ribonucleoprotein G-like 17 20396187 20396485 - 116886051 MODEL JAAIVD010000011 pseudo 625845815 LOC116914941 cofilin-1-like 13 10556189 10556860 - 116914941 MODEL JAAIVD010000008 pseudo 625845816 LOC116889469 small Cajal body-specific RNA 13 X 100888297 100888536 + 116889469 MODEL JAAIVD010000014;XR_004386421 ncrna 625845819 Fbxl3 F-box and leucine rich repeat protein 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN entrainment of circadian clock by photoperiod (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein destabilization (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE, FACIAL ANOMALIES, AND SPEECH DEFECTS (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleus (ortholog) 12 21619467 21639924 + 22301074;30032202 116913145 MODEL JAAIVD010000007;XM_032917350;XM_032917351;XM_032917352 XP_032773241;XP_032773242;XP_032773243 F-box/LRR-repeat protein 3 protein-coding 625845834 LOC116885006 60S ribosomal protein L31-like 15 74127198 74127611 + 22301074;30032202 116885006 MODEL JAAIVD010000010;XM_032886244 XP_032742135 protein-coding 625845838 LOC116896081 rRNA 2'-O-methyltransferase fibrillarin-like 3 214215190 214217187 + 116896081 MODEL JAAIVD010000012 pseudo 625845839 LOC116893104 nucleolin-like 2 64566972 64619466 - 116893104 MODEL JAAIVD010000001 pseudo 625845840 LOC116893525 nesprin-1-like 2 197566080 197580353 + 116893525 MODEL JAAIVD010000001;XM_032895250 XP_032751141 protein-coding 625845849 Fam53c family with sequence similarity 53 member C ASSOCIATED WITH autistic disorder (ortholog) 15 9585745 9597575 - 30032202 116884536 MODEL JAAIVD010000010;XM_032885672 XP_032741563 protein FAM53C protein-coding 625845858 LOC116884650 uncharacterized LOC116884650 15 71854430 71862211 + 116884650 MODEL JAAIVD010000010;XR_004385887 ncrna 625845863 Folr2 folate receptor beta ENCODES a protein that exhibits folic acid binding (ortholog); folic acid receptor activity (ortholog); INVOLVED IN folic acid transport (ortholog); monocyte chemotaxis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 2 100134189 100139896 - 30032202 116891769 MODEL JAAIVD010000001;XM_032893093;XM_032893094 XP_032748984;XP_032748985 protein-coding 625845876 Ythdf2 YTH N6-methyladenosine RNA binding protein F2 ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN gamete generation (ortholog); hematopoietic stem cell proliferation (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 26039050 26064542 + 30032202 116895617 MODEL JAAIVD010000025;XM_032896831 XP_032752722 YTH N6-methyladenosine RNA binding protein 2;YTH domain-containing family protein 2 protein-coding 625845885 Kcnj9 potassium inwardly rectifying channel subfamily J member 9 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN regulation of presynaptic membrane potential (ortholog); FOUND IN inward rectifier potassium channel complex (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynaptic membrane (ortholog) 10 51433065 51439671 - 22301074;30032202 116911009 MODEL JAAIVD010000005;XM_032914738 XP_032770629 G protein-activated inward rectifier potassium channel 3 protein-coding 625845893 Arln allregulin FOUND IN endoplasmic reticulum membrane (ortholog) 3 36897832 36899605 - 116896294 MODEL JAAIVD010000012;XM_032897377 XP_032753268 C3H4orf3 chromosome 3 C4orf3 homolog;uncharacterized protein C4orf3 homolog protein-coding 625845899 LOC116899738 U4 spliceosomal RNA 4 60681499 60681639 + 116899738 MODEL JAAIVD010000003;XR_004387754 snrna 625845902 Tcf20 transcription factor 20 ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Delay with Variable Intellectual Impairment and Behavioral Abnormalities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 252217388 252317309 - 30032202 116914343 MODEL JAAIVD010000025;XM_032918562;XM_032918567;XM_032918570 XP_032774453;XP_032774458;XP_032774461 protein-coding 625845917 C2H10orf88 chromosome 2 C10orf88 homolog ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 2 70476729 70494613 + 116891406 MODEL JAAIVD010000001;XM_032892433;XM_032892434 XP_032748324;XP_032748325 ATPase PAAT protein-coding 625845929 Yjefn3 YjeF N-terminal domain containing 3 ASSOCIATED WITH urinary bladder cancer (ortholog) 13 12155846 12162004 - 30032202 116914541 MODEL JAAIVD010000008;XM_032918872 XP_032774763 yjeF N-terminal domain-containing protein 3 protein-coding 625845939 LOC116910910 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 10 50464105 50464369 + 116910910 MODEL JAAIVD010000005 pseudo 625845940 Iqcf3 IQ motif containing F3 8 97846500 97857593 - 30032202 116907950 MODEL JAAIVD010000027;XM_032911171;XM_032911172 XP_032767062;XP_032767063 IQ domain-containing protein F3 protein-coding 625845956 Hnrnpul2 heterogeneous nuclear ribonucleoprotein U like 2 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 2 9115657 9127571 - 22301074;30032202 116890923 MODEL JAAIVD010000001;XM_032891558;XM_032891559 XP_032747449;XP_032747450 heterogeneous nuclear ribonucleoprotein U-like protein 2 protein-coding 625845978 Mfsd2b MFSD2 lysolipid transporter B, sphingolipid ENCODES a protein that exhibits sphingolipid transporter activity (ortholog); INVOLVED IN lipid transport (ortholog); positive regulation of platelet aggregation (ortholog); sphingosine-1-phosphate receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 7 25503127 25514296 - 30032202 116905671 MODEL JAAIVD010000026;XM_032908654 XP_032764545 major facilitator superfamily domain containing 2B;major facilitator superfamily domain-containing protein 2B protein-coding 625845994 LOC116902553 small nucleolar RNA SNORA48 5 17011274 17011406 + 116902553 MODEL JAAIVD010000023 pseudo 625845995 Rab40b RAB40B, member RAS oncogene family ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular detoxification (ortholog); negative regulation of actin filament bundle assembly (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); lamellipodium membrane (ortholog) 9 62641646 62669271 + 22301074;30032202 116909671 MODEL JAAIVD010000002;XM_032913326 XP_032769217 ras-related protein Rab-40B protein-coding 625846005 Igfbp3 insulin like growth factor binding protein 3 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular space (ortholog); heterochromatin (ortholog); insulin-like growth factor binary complex (ortholog) 11 76113887 76121525 - 22301074;30032202 116912685 MODEL JAAIVD010000006;XM_032916820 XP_032772711 insulin-like growth factor-binding protein 3 protein-coding 625846014 LOC116890096 catenin beta-1-like 1 231220648 231222902 - 116890096 MODEL JAAIVD010000025 pseudo 625846015 LOC116893481 migration and invasion enhancer 1-like 1 17066494 17066906 - 116893481 MODEL JAAIVD010000025 pseudo 625846016 Mb21d2 Mab-21 domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) 4 13758808 13858068 - 116898739 MODEL JAAIVD010000003;XM_032900051 XP_032755942 protein MB21D2 protein-coding 625846022 LOC116912687 ruvB-like 2 11 17699961 17701372 - 116912687 MODEL JAAIVD010000006 pseudo 625846023 Dpep2nb DPEP2 neighbor 17 25742161 25752155 - 116886658 MODEL JAAIVD010000011;XM_032888152 XP_032744043 DPEP2 neighbor protein protein-coding 625846027 Slx1a structure-specific endonuclease subunit SLX1A ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH Fanconi-like syndrome (ortholog); FOUND IN nucleoplasm (ortholog); Slx1-Slx4 complex (ortholog) 2 75208625 75213515 + 22301074;30032202 116891513 MODEL JAAIVD010000001;XM_032892650 XP_032748541 SLX1 homolog A, structure-specific endonuclease subunit;structure-specific endonuclease subunit SLX1 protein-coding 625846037 Socs2 suppressor of cytokine signaling 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); erythropoietin-mediated signaling pathway (ortholog); growth hormone receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 1 174575601 174611915 - 22301074;30032202 116908425 MODEL JAAIVD010000025;XM_032911620;XM_032911621;XM_032911622;XM_032911623 XP_032767511;XP_032767512;XP_032767513;XP_032767514 protein-coding 625846056 Uroc1 urocanate hydratase 1 ENCODES a protein that exhibits urocanate hydratase activity (ortholog); INVOLVED IN L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Ataxia (ortholog); hepatocellular carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog) 6 56547860 56577810 - 22301074;30032202 116902724 MODEL JAAIVD010000024;XM_032905075 XP_032760966 urocanate hydratase protein-coding 625846078 LOC116914499 pinin-like 13 34281810 34284151 - 116914499 MODEL JAAIVD010000008;XR_004389754 pseudo 625846081 LOC116894988 U1 spliceosomal RNA 2 122427446 122427608 + 116894988 MODEL JAAIVD010000001;XR_004387179 snrna 625846084 LOC116913769 olfactory receptor 10G3-like 12 71535623 71536564 + 22301074 116913769 MODEL JAAIVD010000007;XM_032918075 XP_032773966 protein-coding 625846087 LOC116885891 cytochrome P450 3A9-like 16 15050689 15077872 + 22301074;30032202 116885891 MODEL JAAIVD010000004;XM_032887213 XP_032743104 protein-coding 625846104 LOC116888885 40S ribosomal protein SA-like X 63477132 63478005 + 116888885 MODEL JAAIVD010000014 pseudo 625846105 LOC116900459 olfactory receptor 4A15 5 71191210 71192157 - 22301074 116900459 MODEL JAAIVD010000023;XM_032902200 XP_032758091 protein-coding 625846109 LOC116884919 bromodomain-containing protein 8-like 15 9758282 9779504 + 22301074;30032202 116884919 MODEL JAAIVD010000010;XM_032886141 XP_032742032 protein-coding 625846118 Gpr27 G protein-coupled receptor 27 INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN plasma membrane (ortholog) 6 47377993 47380505 - 22301074;30032202 116903466 MODEL JAAIVD010000024;XM_032906018 XP_032761909 probable G-protein coupled receptor 27 protein-coding 625846123 Slc22a8 solute carrier family 22 member 8 ENCODES a protein that exhibits antiporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN glutathione transport (ortholog); prostaglandin transport (ortholog); quaternary ammonium group transport (ortholog); PARTICIPATES IN ibuprofen pharmacodynamics pathway; ibuprofen pharmacokinetics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 9318762 9339310 - 22301074 116890940 MODEL JAAIVD010000001;XM_032891582 XP_032747473 protein-coding 625846139 LOC116908866 uncharacterized LOC116908866 9 31946234 31956149 + 116908866 MODEL JAAIVD010000002;XR_004389035 ncrna 625846144 Arsi arylsulfatase family member I ASSOCIATED WITH autism spectrum disorder (ortholog); hereditary spastic paraplegia (ortholog); paraplegia (ortholog) 15 71030077 71036861 - 116884590 MODEL JAAIVD010000010;XM_032885733 XP_032741624 arylsulfatase I protein-coding 625846149 Arl14ep ARF like GTPase 14 effector protein ASSOCIATED WITH Developmental Disabilities (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); nucleolus (ortholog) 5 84865484 84875993 - 30032202 116901720 MODEL JAAIVD010000023;XM_032903854 XP_032759745 ADP ribosylation factor like GTPase 14 effector protein;ARL14 effector protein protein-coding 625846158 LOC116891014 40S ribosomal protein S15-like 2 18650030 18650440 + 116891014 MODEL JAAIVD010000001 pseudo 625846159 Misp mitotic spindle positioning ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cell migration (ortholog); establishment of centrosome localization (ortholog); establishment of mitotic spindle orientation (ortholog); FOUND IN actin filament (ortholog); cortical actin cytoskeleton (ortholog); focal adhesion (ortholog) 1 155044198 155054456 - 116905609 MODEL JAAIVD010000025;XM_032908602;XM_032908604 XP_032764493;XP_032764495 mitotic interactor and substrate of PLK1 protein-coding 625846170 LOC116898321 histidine triad nucleotide-binding protein 1-like 1 97744561 97744987 - 30032202 116898321 MODEL JAAIVD010000025;XM_032899673 XP_032755564 protein-coding 625846174 Amz1 archaelysin family metallopeptidase 1 16 12456264 12482703 - 22301074 116885618 MODEL JAAIVD010000004;XM_032886918 XP_032742809 archaemetzincin-1 protein-coding 625846186 Smagp small cell adhesion glycoprotein FOUND IN cell junction (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 1 262474098 262490939 + 116883938 MODEL JAAIVD010000025;XM_032885188;XM_032885196 XP_032741079;XP_032741087 protein-coding 625846197 Ppp1r2 protein phosphatase 1 regulatory inhibitor subunit 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of protein binding (ortholog); FOUND IN dendritic spine (ortholog); growth cone (ortholog) 4 16156390 16180166 - 22301074;30032202 116898754 MODEL JAAIVD010000003;XM_032900072 XP_032755963 protein phosphatase inhibitor 2 protein-coding 625846207 Ldb2 LIM domain binding 2 ENCODES a protein that exhibits enzyme binding (ortholog); LIM domain binding (ortholog); INVOLVED IN epithelial structure maintenance (ortholog); hair follicle development (ortholog); positive regulation of cellular component biogenesis (ortholog); FOUND IN cell leading edge (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 11 61003534 61328529 + 30032202 116912525 MODEL JAAIVD010000006;XM_032916616;XM_032916618;XM_032916619;XM_032916620;XM_032916621;XM_032916622;XM_032916623;XM_032916624;XM_032916625;XM_032916626 XP_032772507;XP_032772509;XP_032772510;XP_032772511;XP_032772512;XP_032772513;XP_032772514;XP_032772515;XP_032772516;XP_032772517 LIM domain-binding protein 2 protein-coding 625846242 LOC116895585 fatty acid-binding protein 9 3 144245366 144259849 - 30032202 116895585 MODEL JAAIVD010000012;XM_032896810;XM_032896811;XM_032896812 XP_032752701;XP_032752702;XP_032752703 fatty acid-binding protein, adipocyte protein-coding 625846259 LOC116898998 mitogen-activated protein kinase kinase kinase kinase 4-like 1 30836500 30839056 - 116898998 MODEL JAAIVD010000025 pseudo 625846260 LOC116890556 small nucleolar RNA SNORA17 1 270877985 270878110 + 116890556 MODEL JAAIVD010000025;XR_004386730 snorna 625846263 Thap6 THAP domain containing 6 FOUND IN microtubule cytoskeleton (ortholog) 11 4790928 4801336 + 116912134 MODEL JAAIVD010000006;XM_032916045;XM_032916046;XM_032916047 XP_032771936;XP_032771937;XP_032771938 THAP domain-containing protein 6 protein-coding 625846280 Kdm4a lysine demethylase 4A ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of astrocyte differentiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); breast cancer (ortholog); Cardiomegaly (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 1 38841799 38884163 + 30032202 116897934 MODEL JAAIVD010000025;XM_032899337 XP_032755228 lysine-specific demethylase 4A protein-coding 625846305 LOC116888166 cancer/testis antigen 55-like X 116892785 116904086 + 116888166 MODEL JAAIVD010000014;XM_032889489 XP_032745380 protein-coding 625846312 LOC116894581 vomeronasal type-1 receptor 2-like 2 180372680 180373600 - 22301074;30032202 116894581 MODEL JAAIVD010000001;XM_032896302 XP_032752193 protein-coding 625846315 LOC116906331 U6 spliceosomal RNA 7 79259920 79260024 + 116906331 MODEL JAAIVD010000026;XR_004388617 snrna 625846318 Hsd17b8 hydroxysteroid 17-beta dehydrogenase 8 ENCODES a protein that exhibits (3R)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); NADH binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen biosynthetic process (ortholog); estrogen metabolic process (ortholog); FOUND IN membrane (ortholog); mitochondrial envelope (ortholog); mitochondrial matrix (ortholog) 18 8298301 8300328 + 30032202 116887421 MODEL JAAIVD010000013;XM_032889032;XM_032889033;XM_032889035;XM_032889036;XM_032889037;XR_004386213 XP_032744923;XP_032744924;XP_032744926;XP_032744927;XP_032744928 estradiol 17-beta-dehydrogenase 8 protein-coding 625846342 LOC116903860 SCO-spondin-like 6 92467598 92520601 - 22301074;30032202 116903860 MODEL JAAIVD010000024;XM_032906603 XP_032762494 protein-coding 625846448 LOC116885972 5S ribosomal RNA 16 33744449 33744557 - 116885972 MODEL JAAIVD010000004 pseudo 625846449 LOC116913540 translation initiation factor IF-2-like 12 83844957 83882731 + 116913540 MODEL JAAIVD010000007;XM_032917740 XP_032773631 protein-coding 625846454 LOC116884897 serine protease inhibitor Kazal-type 1-like 15 1273221 1283130 - 22301074 116884897 MODEL JAAIVD010000010;XM_032886126 XP_032742017 protein-coding 625846461 Hapstr2 HUWE1 associated protein modifying stress responses 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN protein stabilization (ortholog); FOUND IN nucleus (ortholog) X 119623377 119625447 + 116889236 MODEL JAAIVD010000014;XM_032890386 XP_032746277 UPF0472 protein C16orf72 protein-coding 625846466 Ssbp2 single stranded DNA binding protein 2 ASSOCIATED WITH bipolar disorder (ortholog); prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 3 204527838 204781784 - 22301074;30032202 116897304 MODEL JAAIVD010000012;XM_032899048;XM_032899049;XM_032899050;XM_032899051;XM_032899052;XM_032899053;XM_032899054 XP_032754939;XP_032754940;XP_032754941;XP_032754942;XP_032754943;XP_032754944;XP_032754945 single-stranded DNA-binding protein 2 protein-coding 625846501 Lmtk3 lemur tyrosine kinase 3 2 153712513 153731912 - 22301074;30032202 116893322 MODEL JAAIVD010000001;XM_032895140 XP_032751031 serine/threonine-protein kinase LMTK3 protein-coding 625846521 LOC116914931 ubiquitin-conjugating enzyme E2 R1-like 13 6629390 6630020 - 116914931 MODEL JAAIVD010000008 pseudo 625846522 LOC116883732 serine/threonine-protein phosphatase 2A catalytic subunit 14 46608626 46609561 + 116883732 MODEL JAAIVD010000009 pseudo 625846523 LOC116904373 creatine kinase U-type, mitochondrial-like 6 87889336 87897334 + 116904373 MODEL JAAIVD010000024 pseudo 625846524 Fgl2 fibrinogen like 2 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of dendritic cell antigen processing and presentation (ortholog); negative regulation of macrophage antigen processing and presentation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autoimmune glomerulonephritis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog) 6 150654550 150660308 + 30032202 116904172 MODEL JAAIVD010000024;XM_032907073 XP_032762964 fibroleukin protein-coding 625846530 Pccb propionyl-CoA carboxylase subunit beta ENCODES a protein that exhibits propionyl-CoA carboxylase activity (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN catalytic complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 92347217 92397477 - 30032202 116907249 MODEL JAAIVD010000027;XM_032910206 XP_032766097 propionyl-CoA carboxylase beta chain, mitochondrial protein-coding 625846549 LOC116889097 nucleophosmin-like X 113342838 113343690 - 116889097 MODEL JAAIVD010000014 pseudo 625846550 LOC116895890 eukaryotic initiation factor 4A-I-like 3 114392887 114393660 + 116895890 MODEL JAAIVD010000012 pseudo 625846551 Ccer2 coiled-coil glutamate rich protein 2 2 167247505 167250366 - 116892383 MODEL JAAIVD010000001;XM_032894048 XP_032749939 coiled-coil domain-containing glutamate-rich protein 2 protein-coding 625846559 Znf513 zinc finger protein 513 ENCODES a protein that exhibits DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN retina development in camera-type eye (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN nucleus (ortholog) 7 22883899 22887202 + 30032202 116905980 MODEL JAAIVD010000026;XM_032908991 XP_032764882 protein-coding 625846566 C7 complement C7 INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); intracellular sodium ion homeostasis (ortholog); ASSOCIATED WITH complement component 7 deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); FOUND IN membrane attack complex (ortholog); other organism cell membrane (ortholog); transmembrane transporter complex (ortholog) 3 175254868 175329097 + 22301074 116896010 MODEL JAAIVD010000012;XM_032897030 XP_032752921 complement component C7 protein-coding 625846587 Commd8 COMM domain containing 8 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 11 28979103 28989576 - 116912547 MODEL JAAIVD010000006;XM_032916648 XP_032772539 COMM domain-containing protein 8 protein-coding 625846596 LOC116887745 small nucleolar RNA SNORD98 18 28576891 28576955 - 116887745 MODEL JAAIVD010000013;XR_004386251 snorna 625846599 Ctrl chymotrypsin like ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN extracellular space (ortholog) 17 25672342 25675679 - 22301074;30032202 116886398 MODEL JAAIVD010000011;XM_032887867 XP_032743758 chymotrypsin-like protease CTRL-1 protein-coding 625846610 LOC116895962 prefoldin subunit 3-like 3 144788144 144788792 - 116895962 MODEL JAAIVD010000012 pseudo 625846611 Chmp5 charged multivesicular body protein 5 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) 1 117217009 117234144 - 30032202 116902527 MODEL JAAIVD010000025;XM_032905029 XP_032760920 protein-coding 625846623 Hexa hexosaminidase subunit alpha ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GM2 gangliosidosis (ortholog); FOUND IN azurophil granule (ortholog); beta-N-acetylhexosaminidase complex (ortholog); cytosol (ortholog) 8 53376633 53402727 + 22301074;30032202 116906709 MODEL JAAIVD010000027;XM_032909515 XP_032765406 beta-hexosaminidase subunit alpha protein-coding 625846641 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 67678153 67678225 - 116889588 MODEL JAAIVD010000014 trna 625846642 LOC116892028 small nuclear ribonucleoprotein-associated protein N 2 139967084 139972658 + 22301074;30032202 116892028 MODEL JAAIVD010000001;XM_032893486 XP_032749377 protein-coding 625846653 LOC116911569 ubiquitin-conjugating enzyme E2 S-A-like 10 11392641 11400727 + 116911569 MODEL JAAIVD010000005 pseudo 625846654 LOC116885293 2'-5'-oligoadenylate synthase 1A-like 16 33029717 33038295 - 30032202 116885293 MODEL JAAIVD010000004;XM_032886542 XP_032742433 protein-coding 625846665 LOC116912764 zinc finger protein GLI4-like 1 247959924 247965259 + 30032202 116912764 MODEL JAAIVD010000025;XM_032916918;XM_032916925 XP_032772809;XP_032772816 protein-coding 625846677 Cdca2 cell division cycle associated 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); myoepithelioma (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 12 56764464 56810087 + 30032202 116913781 MODEL JAAIVD010000007;XM_032918087 XP_032773978 cell division cycle-associated protein 2 protein-coding 625846696 LOC116888101 leucine-rich repeat and calponin homology domain-containing protein 2-like X 98247377 98268818 - 22301074 116888101 MODEL JAAIVD010000014;XM_032889462 XP_032745353 protein-coding 625846706 Flt3 fms related receptor tyrosine kinase 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); nuclear glucocorticoid receptor binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 16 6442365 6517263 + 22301074;30032202 116885690 MODEL JAAIVD010000004;XM_032886997 XP_032742888 receptor-type tyrosine-protein kinase FLT3 protein-coding 625846734 LOC116903863 uncharacterized LOC116903863 1 144703781 144705926 - 116903863 MODEL JAAIVD010000025;XR_004388306;XR_004388307 ncrna 625846742 LOC116900122 olfactory receptor 50-like 5 14298162 14299085 + 22301074;30032202 116900122 MODEL JAAIVD010000023;XM_032901897 XP_032757788 protein-coding 625846745 Pkm pyruvate kinase M1/2 ENCODES a protein that exhibits ADP binding (ortholog); histone H3T11 kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); canonical glycolysis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN glycolysis pathway; hypoxia inducible factor pathway; pyruvate metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); COVID-19 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 53497467 53518958 + 22301074;30032202 116906546 MODEL JAAIVD010000027;XM_032909248;XM_032909251 XP_032765139;XP_032765142 pyruvate kinase PKM protein-coding 625846762 Ppp2r2c protein phosphatase 2 regulatory subunit Bgamma ASSOCIATED WITH Emphysema (ortholog) 11 68195668 68280249 - 22301074;30032202 116912082 MODEL JAAIVD010000006;XM_032915961;XM_032915962 XP_032771852;XP_032771853 protein phosphatase 2, regulatory subunit B, gamma protein-coding 625846778 Rnase6 ribonuclease A family member 6 ENCODES a protein that exhibits RNA nuclease activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH liver disease (ortholog); toxic encephalopathy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular space (ortholog) 12 72147213 72149790 + 22301074;30032202 116914042 MODEL JAAIVD010000007;XM_032918321 XP_032774212 ribonuclease A family member k6;ribonuclease K6 protein-coding 625846784 Ngef neuronal guanine nucleotide exchange factor ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of dendritic spine morphogenesis (ortholog); regulation of synapse pruning (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 4 159601397 159698108 - 22301074;30032202 116899606 MODEL JAAIVD010000003;XM_032901562;XM_032901563 XP_032757453;XP_032757454 ephexin-1 protein-coding 625846806 LOC116891840 probable ribosome biogenesis protein RLP24 2 108246249 108246739 + 30032202 116891840 MODEL JAAIVD010000001;XM_032893207 XP_032749098 protein-coding 625846809 Phykpl 5-phosphohydroxy-L-lysine phospho-lyase ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Phosphohydroxylysinuria (ortholog) 9 34171646 34193134 + 22301074;30032202 116910512 MODEL JAAIVD010000002;XM_032914410;XM_032914411;XM_032914412;XM_032914413 XP_032770301;XP_032770302;XP_032770303;XP_032770304 protein-coding 625846841 LOC116897725 Y-box-binding protein 1-like 4 75276944 75281398 - 116897725 MODEL JAAIVD010000003 pseudo 625846842 Crtap cartilage associated protein INVOLVED IN negative regulation of post-translational protein modification (ortholog); protein stabilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog) 8 104971377 104987090 - 22301074;30032202 116907811 MODEL JAAIVD010000027;XM_032910989 XP_032766880 cartilage-associated protein protein-coding 625846853 LOC116910015 60S ribosomal protein L12-like 9 90461262 90461778 + 116910015 MODEL JAAIVD010000002 pseudo 625846854 LOC116889599 probable ubiquitin carboxyl-terminal hydrolase FAF-X Y 2135647 2265417 + 22301074;30032202 116889599 MODEL JAAIVD010000015;XM_032890532 XP_032746423 protein-coding 625846900 Pnmt phenylethanolamine N-methyltransferase ENCODES a protein that exhibits phenylethanolamine N-methyltransferase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Contusions (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 9 56005929 56007492 - 30032202 116909705 MODEL JAAIVD010000002;XM_032913375 XP_032769266 protein-coding 625846907 Rpap3 RNA polymerase II associated protein 3 FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytosol (ortholog) 1 270491380 270521785 - 22301074 116884529 MODEL JAAIVD010000025;XM_032885668 XP_032741559 RNA polymerase II-associated protein 3 protein-coding 625846928 Arfip1 ARF interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of retrograde transport, endosome to Golgi (ortholog); regulation of protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); trans-Golgi network membrane (ortholog) 3 69017132 69100281 + 22301074;30032202 116896736 MODEL JAAIVD010000012;XM_032898160;XM_032898161;XM_032898163;XM_032898164 XP_032754051;XP_032754052;XP_032754054;XP_032754055 ADP ribosylation factor interacting protein 1;arfaptin-1 protein-coding 625846952 Arhgef28 Rho guanine nucleotide exchange factor 28 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system neuron axonogenesis (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH Meniere's disease (ortholog) 3 198385056 198681000 + 22301074;30032202 116897261 MODEL JAAIVD010000012;XM_032898997 XP_032754888 protein-coding 625846992 Gtf3c1 general transcription factor IIIC subunit 1 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); ribonucleoprotein complex (ortholog) 2 76222545 76289272 + 30032202 116891535 MODEL JAAIVD010000001;XM_032892690 XP_032748581 general transcription factor 3C polypeptide 1 protein-coding 625847033 LOC116885177 autism susceptibility gene 2 protein homolog 16 21435849 21922337 + 116885177 MODEL JAAIVD010000004;XM_032886391 XP_032742282 protein-coding 625847041 LOC116913136 cytochrome b-c1 complex subunit 10-like 12 7719943 7720109 + 22301074;30032202 116913136 MODEL JAAIVD010000007;XM_032917340 XP_032773231 protein-coding 625847044 LOC116888169 mRNA decay activator protein ZFP36L3-like X 116926801 116931990 + 22301074;30032202 116888169 MODEL JAAIVD010000014;XM_032889491 XP_032745382 protein-coding 625847050 Ffar2 free fatty acid receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH essential hypertension (ortholog); FOUND IN cell projection (ortholog); plasma membrane (ortholog) 2 165194515 165195591 + 22301074;30032202 116894451 MODEL JAAIVD010000001;XM_032896156 XP_032752047 protein-coding 625847054 Ube2h ubiquitin conjugating enzyme E2 H ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); polycystic ovary syndrome (ortholog) 6 109251481 109344630 + 30032202 116904004 MODEL JAAIVD010000024;XM_032906813;XM_032906814 XP_032762704;XP_032762705 ubiquitin-conjugating enzyme E2 H protein-coding 625847066 Nme9 NME/NM23 family member 9 8 90795779 90813108 + 116908253 MODEL JAAIVD010000027;XM_032911507 XP_032767398 thioredoxin domain-containing protein 6 protein-coding 625847082 Gtf2e1 general transcription factor IIE subunit 1 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 22484101 22515328 - 22301074;30032202 116898832 MODEL JAAIVD010000003;XM_032900185 XP_032756076 protein-coding 625847091 Gltp glycolipid transfer protein ENCODES a protein that exhibits glycolipid binding (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); response to immobilization stress (ortholog); FOUND IN cytosol (ortholog) 16 39259163 39279641 + 22301074;30032202 116885604 MODEL JAAIVD010000004;XM_032886906 XP_032742797 protein-coding 625847100 LOC116888684 KAT8 regulatory NSL complex subunit 2-like X 70132196 70133460 + 30032202 116888684 MODEL JAAIVD010000014;XM_032889978 XP_032745869 protein-coding 625847103 Tbr1 T-box brain transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN amygdala development (ortholog); cerebral cortex development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN nucleus (ortholog) 5 39447955 39459135 + 22301074;30032202 116901445 MODEL JAAIVD010000023;XM_032903379 XP_032759270 T-box brain protein 1 protein-coding 625847113 LOC116886177 uncharacterized LOC116886177 1 11326093 11327599 + 116886177 MODEL JAAIVD010000025;XR_004386092 ncrna 625847117 Stk38 serine/threonine kinase 38 ENCODES a protein that exhibits ATP binding (ortholog); histone reader activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 18 4859673 4892819 + 22301074;30032202 116886922 MODEL JAAIVD010000013;XM_032888402 XP_032744293 serine/threonine-protein kinase 38 protein-coding 625847135 Fetub fetuin B ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); negative regulation of endopeptidase activity (ortholog); single fertilization (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) 4 7601630 7612579 + 22301074;30032202 116897809 MODEL JAAIVD010000003;XM_032899222;XM_032899223 XP_032755113;XP_032755114 fetuin-B protein-coding 625847150 Moap1 modulator of apoptosis 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 7 114015323 114031033 - 30032202 116905361 MODEL JAAIVD010000026;XM_032908283;XM_032908284;XM_032908285 XP_032764174;XP_032764175;XP_032764176 protein-coding 625847161 LOC116900352 olfactory receptor 5W2-like 5 69175078 69176019 - 22301074;30032202 116900352 MODEL JAAIVD010000023;XM_032902105 XP_032757996 protein-coding 625847165 Rarg retinoic acid receptor gamma ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Cardiotoxicity (ortholog); cleft palate (ortholog); heart disease (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 260817589 260839271 + 22301074;30032202 116883531 MODEL JAAIVD010000025;XM_032884707;XM_032884713 XP_032740598;XP_032740604 protein-coding 625847182 LOC116900887 olfactory receptor 4S2-like 5 70000213 70001070 + 116900887 MODEL JAAIVD010000023 pseudo 625847183 LOC116897736 uncharacterized LOC116897736 4 102583151 102588524 - 116897736 MODEL JAAIVD010000003;XM_032899180 XP_032755071 uncharacterized protein LOC116897736 protein-coding 625847191 Utp11 UTP11 small subunit processome component INVOLVED IN nervous system development (ortholog); positive regulation of apoptotic process (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 1 33607740 33623379 + 22301074;30032202 116896904 MODEL JAAIVD010000025;XM_032898460 XP_032754351 probable U3 small nucleolar RNA-associated protein 11 protein-coding 625847203 LOC116898528 splicing regulatory glutamine/lysine-rich protein 1-like 4 140780134 140822235 + 116898528 MODEL JAAIVD010000003 pseudo 625847204 Jhy junctional cadherin complex regulator INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cell differentiation (ortholog) 8 35494430 35552223 - 30032202 116907906 MODEL JAAIVD010000027;XM_032911106 XP_032766997 jhy protein homolog protein-coding 625847217 LOC116889556 U2 spliceosomal RNA X 98688015 98688182 - 116889556 MODEL JAAIVD010000014 pseudo 625847218 LOC116904798 U4 spliceosomal RNA 6 43116298 43116418 + 116904798 MODEL JAAIVD010000024 pseudo 625847219 LOC116894022 olfactory receptor 51V1-like 2 101963824 101964768 + 22301074 116894022 MODEL JAAIVD010000001;XM_032895738 XP_032751629 protein-coding 625847222 Plekhm3 pleckstrin homology domain containing M3 INVOLVED IN myoblast differentiation (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 4 138675018 138833587 - 116899455 MODEL JAAIVD010000003;XM_032901233;XM_032901234;XM_032901236;XM_032901237 XP_032757124;XP_032757125;XP_032757127;XP_032757128 pleckstrin homology domain-containing family M member 3 protein-coding 625847243 LOC116895608 RNA-binding protein FUS-like 3 158437852 158439384 + 116895608 MODEL JAAIVD010000012 pseudo 625847244 Eipr1 EARP complex and GARP complex interacting protein 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of endocytic recycling (ortholog); positive regulation of retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); trans-Golgi network (ortholog) 7 42276265 42319286 + 22301074;30032202 116904933 MODEL JAAIVD010000026;XM_032907565 XP_032763456 EARP and GARP complex-interacting protein 1 protein-coding 625847255 LOC116893404 uncharacterized LOC116893404 2 173184441 173192051 - 30032202 116893404 MODEL JAAIVD010000001;XM_032895189 XP_032751080 uncharacterized protein LOC116893404 protein-coding 625847263 Spin1 spindlin 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of Wnt signaling pathway (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 14 69494165 69544662 + 22301074;30032202 116884025 MODEL JAAIVD010000009;XM_032885261 XP_032741152 spindlin-1 protein-coding 625847273 Marchf11 membrane associated ring-CH-type finger 11 3 154414257 154513756 - 22301074;30032202 116897064 MODEL JAAIVD010000012;XM_032898688;XM_032898689 XP_032754579;XP_032754580 E3 ubiquitin-protein ligase MARCH11 protein-coding 625847286 Ciita class II major histocompatibility complex transactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to electrical stimulus (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Addison's disease (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 11822224 11869434 - 22301074;30032202 116908900 MODEL JAAIVD010000002;XM_032912353;XM_032912354 XP_032768244;XP_032768245 MHC class II transactivator protein-coding 625847312 LOC116902728 vomeronasal type-1 receptor 94-like 6 56638940 56639942 - 22301074;30032202 116902728 MODEL JAAIVD010000024;XM_032905078 XP_032760969 protein-coding 625847316 LOC116907749 uncharacterized LOC116907749 8 33256694 33327790 - 116907749 MODEL JAAIVD010000027;XR_004388841 ncrna 625847320 Serac1 serine active site containing 1 INVOLVED IN extracellular matrix organization (ortholog); intracellular cholesterol transport (ortholog); phosphatidylglycerol acyl-chain remodeling (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria with deafness, encephalopathy, and Leigh-like syndrome (ortholog); Deafness (ortholog); dystonia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular matrix (ortholog) 2 192736383 192771966 + 116892855 MODEL JAAIVD010000001;XM_032894750 XP_032750641 protein SERAC1 protein-coding 625847341 Bdh2 3-hydroxybutyrate dehydrogenase 2 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); NAD binding (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); siderophore biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 23789971 23806497 - 30032202 116895311 MODEL JAAIVD010000012;XM_032896621 XP_032752512 3-hydroxybutyrate dehydrogenase type 2 protein-coding 625847354 LOC116903870 uncharacterized LOC116903870 1 144661901 144670162 - 116903870 MODEL JAAIVD010000025;XR_004388308 ncrna 625847359 Upp2 uridine phosphorylase 2 ENCODES a protein that exhibits deoxyuridine phosphorylase activity (ortholog); identical protein binding (ortholog); uridine phosphorylase activity (ortholog); INVOLVED IN CMP catabolic process (ortholog); dCMP catabolic process (ortholog); UMP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); type III intermediate filament (ortholog) 5 36518187 36556034 + 22301074;30032202 116900181 MODEL JAAIVD010000023;XM_032901935;XM_032901937;XM_032901938 XP_032757826;XP_032757828;XP_032757829 protein-coding 625847377 Vipr1 vasoactive intestinal peptide receptor 1 ENCODES a protein that exhibits peptide hormone binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); vasoactive intestinal polypeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH achalasia (ortholog); Crohn's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 8 112806203 112832742 + 22301074;30032202 116907972 MODEL JAAIVD010000027;XM_032911202;XM_032911203;XM_032911204 XP_032767093;XP_032767094;XP_032767095 vasoactive intestinal polypeptide receptor 1 protein-coding 625847401 Ahrr aryl-hydrocarbon receptor repressor INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nitric oxide metabolic process (ortholog); ASSOCIATED WITH hypertension (ortholog); Prenatal Exposure Delayed Effects (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 203675214 203720673 - 22301074;30032202 116893540 MODEL JAAIVD010000001;XM_032895260 XP_032751151 aryl hydrocarbon receptor repressor protein-coding 625847410 Rbm25 RNA binding motif protein 25 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of apoptotic process (ortholog); FOUND IN nuclear speck (ortholog) 7 97726586 97774233 + 22301074;30032202 116905250 MODEL JAAIVD010000026;XM_032908096;XM_032908097;XM_032908098 XP_032763987;XP_032763988;XP_032763989 RNA-binding protein 25 protein-coding 625847438 LOC116899841 5S ribosomal RNA 4 132337952 132338070 - 116899841 MODEL JAAIVD010000003;XR_004387838 rrna 625847441 LOC116902620 small nucleolar RNA SNORD67 5 65747738 65747847 + 116902620 MODEL JAAIVD010000023;XR_004388198 snorna 625847444 LOC116895850 serine/Arginine-related protein 53-like 3 87935855 88241292 - 30032202 116895850 MODEL JAAIVD010000012;XM_032896959 XP_032752850 protein-coding 625847456 Ilf2 interleukin enhancer binding factor 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 63131372 63142970 - 116896604 MODEL JAAIVD010000012;XM_032897855 XP_032753746 interleukin enhancer-binding factor 2 protein-coding 625847474 LOC116908211 60S ribosomal protein L27a-like 8 71994130 71994657 - 116908211 MODEL JAAIVD010000027 pseudo 625847475 LOC116894529 vomeronasal type-1 receptor 4-like 2 175754120 175755046 + 22301074;30032202 116894529 MODEL JAAIVD010000001;XM_032896233 XP_032752124 protein-coding 625847479 LOC116902276 GA-binding protein subunit beta-1-like 1 127668756 127696421 + 116902276 MODEL JAAIVD010000025 pseudo 625847480 LOC116898945 translin-associated protein X-like 4 47605775 47606654 - 116898945 MODEL JAAIVD010000003 pseudo 625847481 LOC116913847 ribosome biogenesis protein NOP53-like 12 58593623 58598061 + 116913847 MODEL JAAIVD010000007 pseudo 625847482 LOC116907248 heterogeneous nuclear ribonucleoprotein A1-like 8 12776159 12780413 + 116907248 MODEL JAAIVD010000027 pseudo 625847483 Dlg5 discs large MAGUK scaffold protein 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apical protein localization (ortholog); epithelial to mesenchymal transition (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH YUKSEL-VOGEL-BAUER SYNDROME (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); ciliary basal body (ortholog) 12 93851074 93958807 - 22301074 116914073 MODEL JAAIVD010000007;XM_032918379;XM_032918380 XP_032774270;XP_032774271 disks large homolog 5 protein-coding 625847522 Ccdc102a coiled-coil domain containing 102A 17 1780474 1796087 - 22301074 116886535 MODEL JAAIVD010000011;XM_032888055 XP_032743946 coiled-coil domain-containing protein 102A protein-coding 625847535 Trim7 tripartite motif containing 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 31436695 31450529 + 22301074 116909963 MODEL JAAIVD010000002;XM_032913738 XP_032769629 E3 ubiquitin-protein ligase TRIM7 protein-coding 625847546 Icmt isoprenylcysteine carboxyl methyltransferase ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity (ortholog); INVOLVED IN bone mineralization (ortholog); C-terminal protein methylation (ortholog); CAAX-box protein maturation (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); large ribosomal subunit (ortholog) 1 8439684 8446505 - 22301074;30032202 116892271 MODEL JAAIVD010000025;XM_032893863 XP_032749754 protein-S-isoprenylcysteine O-methyltransferase protein-coding 625847555 Bmp4 bone morphogenetic protein 4 ENCODES a protein that exhibits BMP receptor binding (ortholog); chemoattractant activity (ortholog); co-receptor binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure regression (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glypican signaling pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); vesicle (ortholog) 12 76673818 76680803 + 22301074;30032202 116913799 MODEL JAAIVD010000007;XM_032918105 XP_032773996 protein-coding 625847563 Zeb2 zinc finger E-box binding homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); R-SMAD binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell proliferation in forebrain (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); Breast Neoplasms (ortholog); cerebellar disease (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 22989056 23120256 - 30032202 116901386 MODEL JAAIVD010000023;XM_032903254;XM_032903256;XM_032903257 XP_032759145;XP_032759147;XP_032759148 zinc finger E-box-binding homeobox 2 protein-coding 625847585 LOC116890524 small nucleolar RNA SNORA17 1 138041768 138041898 - 116890524 MODEL JAAIVD010000025;XR_004386706 snorna 625847588 LOC116889107 26S proteasome regulatory subunit 10B-like X 110657965 110659274 - 22301074;30032202 116889107 MODEL JAAIVD010000014;XM_032890273 XP_032746164 protein-coding 625847593 LOC116900290 olfactory receptor 8K3-like 5 63608041 63608856 - 22301074;30032202 116900290 MODEL JAAIVD010000023;XM_032902045 XP_032757936 protein-coding 625847596 LOC116915059 beta-defensin 39 13 65049697 65053421 + 22301074;30032202 116915059 MODEL JAAIVD010000008;XM_032919476 XP_032775367 protein-coding 625847601 Rab12 RAB12, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endosome to lysosome transport (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN autophagosome (ortholog); lysosome (ortholog); phagocytic vesicle (ortholog) 4 176165321 176191384 - 22301074;30032202 116899700 MODEL JAAIVD010000003;XM_032901724 XP_032757615 ras-related protein Rab-12 protein-coding 625847611 Slc50a1 solute carrier family 50 member 1 ENCODES a protein that exhibits glucoside transmembrane transporter activity (ortholog); FOUND IN endomembrane system (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 3 64404434 64406829 + 22301074;30032202 116896653 MODEL JAAIVD010000012;XM_032897985 XP_032753876 sugar transporter SWEET1 protein-coding 625847621 Scamp5 secretory carrier membrane protein 5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN negative regulation of endocytosis (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 41 (ortholog); basal cell carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 8 51333005 51359163 - 22301074;30032202 116908084 MODEL JAAIVD010000027;XM_032911361;XM_032911362;XM_032911363;XM_032911364 XP_032767252;XP_032767253;XP_032767254;XP_032767255 secretory carrier-associated membrane protein 5 protein-coding 625847640 LOC116906874 eukaryotic translation initiation factor 1-like 8 67637061 67637711 - 22301074;30032202 116906874 MODEL JAAIVD010000027;XM_032909786 XP_032765677 protein-coding 625847645 Mlc1 modulator of VRAC current 1 ENCODES a protein that exhibits identical protein binding (ortholog); monoatomic ion channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN caveolin-mediated endocytosis (ortholog); cellular response to cholesterol (ortholog); monoatomic ion transmembrane transport (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); basolateral plasma membrane (ortholog) 1 258274350 258294156 - 30032202 116914893 MODEL JAAIVD010000025;XM_032919340 XP_032775231 membrane protein MLC1 protein-coding 625847661 Eif4ebp1 eukaryotic translation initiation factor 4E binding protein 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein phosphatase 2A binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN insulin signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); human immunodeficiency virus infectious disease (ortholog); Inflammation (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) 13 59257609 59272187 - 22301074;30032202 116914480 MODEL JAAIVD010000008;XM_032918783 XP_032774674 eukaryotic translation initiation factor 4E-binding protein 1 protein-coding 625847668 Ptcra pre T cell antigen receptor alpha INVOLVED IN alpha-beta T cell differentiation (ortholog); negative regulation of thymocyte apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Immunodeficiency 126 (ortholog); polycystic ovary syndrome (ortholog); FOUND IN plasma membrane (ortholog) 4 83103882 83112599 + 30032202 116898045 MODEL JAAIVD010000003;XM_032899438 XP_032755329 pre T-cell antigen receptor alpha protein-coding 625847675 Zic1 Zic family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); brain development (ortholog); central nervous system development (ortholog); ASSOCIATED WITH craniosynostosis (ortholog); craniosynostosis 6 (ortholog); Dandy-Walker syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 83101629 83106418 - 30032202 116906914 MODEL JAAIVD010000027;XM_032909834;XM_032909835 XP_032765725;XP_032765726 Zic family member 1;zinc finger protein ZIC 1 protein-coding 625847686 LOC116890487 small nucleolar RNA SNORD37 1 153709773 153709836 - 116890487 MODEL JAAIVD010000025;XR_004386674 snorna 625847689 Wls Wnt ligand secretion mediator ENCODES a protein that exhibits identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cementum mineralization (ortholog); exocrine pancreas development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Zaki syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 3 2283674 2380963 + 30032202 116896121 MODEL JAAIVD010000012;XM_032897085;XM_032897086 XP_032752976;XP_032752977 protein wntless homolog protein-coding 625847710 LOC116903747 MICOS complex subunit Mic26-like 6 84968983 84969571 - 116903747 MODEL JAAIVD010000024 pseudo 625847711 LOC116886616 carboxylesterase 1C-like 17 14592218 14601258 - 30032202 116886616 MODEL JAAIVD010000011;XM_032888124 XP_032744015 protein-coding 625847718 LOC116892742 protein phosphatase 1 regulatory subunit 14C-like 2 180474210 180476121 - 22301074;30032202 116892742 MODEL JAAIVD010000001;XM_032894615 XP_032750506 protein-coding 625847723 Slc7a7 solute carrier family 7 member 7 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); INVOLVED IN L-arginine transmembrane transport (ortholog); L-leucine transport (ortholog); regulation of arginine metabolic process (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog) 12 70583774 70631829 + 22301074;30032202 116913432 MODEL JAAIVD010000007;XM_032917624;XM_032917625;XM_032917627;XM_032917628 XP_032773515;XP_032773516;XP_032773518;XP_032773519 Y+L amino acid transporter 1 protein-coding 625847747 LOC116915156 U4 spliceosomal RNA 13 59967401 59967528 + 116915156 MODEL JAAIVD010000008 pseudo 625847748 LOC116899752 U6 spliceosomal RNA 4 103561121 103561224 + 116899752 MODEL JAAIVD010000003;XR_004387767 snrna 625847751 LOC116908465 U6 spliceosomal RNA 8 106879007 106879112 - 116908465 MODEL JAAIVD010000027;XR_004388983 snrna 625847754 Jph1 junctophilin 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN muscle organ development (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2K (ortholog); congenital myopathy (ortholog); Congenital myopathy 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) 1 151112238 151208794 - 22301074;30032202 116904100 MODEL JAAIVD010000025;XM_032906972;XM_032906981;XM_032906990;XM_032906998 XP_032762863;XP_032762872;XP_032762881;XP_032762889 junctophilin-1 protein-coding 625847771 LOC116885680 leukosialin-like 16 14659960 14664771 - 116885680 MODEL JAAIVD010000004 pseudo 625847772 LOC116889159 ubiquitin-conjugating enzyme E2 variant 1-like X 51941375 51941876 - 116889159 MODEL JAAIVD010000014 pseudo 625847773 Mgst2 microsomal glutathione S-transferase 2 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN glutathione biosynthetic process (ortholog); leukotriene biosynthetic process (ortholog); lipid metabolic process (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 3 102777246 102799051 - 22301074;30032202 116896886 MODEL JAAIVD010000012;XM_032898432;XM_032898433 XP_032754323;XP_032754324 protein-coding 625847787 Dand5 DAN domain BMP antagonist family member 5 ENCODES a protein that exhibits morphogen activity (ortholog); INVOLVED IN atrial septum development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right asymmetry in lateral mesoderm (ortholog); ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 13 (ortholog); visceral heterotaxy 5 (ortholog) 17 15470943 15476893 + 30032202 116886029 MODEL JAAIVD010000011;XM_032887320 XP_032743211 DAN domain family member 5 protein-coding 625847792 LOC116889347 barrier-to-autointegration factor-like X 54685655 54685917 + 116889347 MODEL JAAIVD010000014 pseudo 625847793 LOC116888423 embryonic testis differentiation protein-like X 130338623 130338812 - 116888423 MODEL JAAIVD010000014;XM_032889692 XP_032745583 protein-coding 625847798 LOC116909435 casein kinase II subunit alpha-like 9 36593675 36594617 - 116909435 MODEL JAAIVD010000002 pseudo 625847799 LOC116900273 olfactory receptor 1038 5 63357370 63358329 + 22301074;30032202 116900273 MODEL JAAIVD010000023;XM_032902025 XP_032757916 protein-coding 625847802 LOC116887876 actin, clone 302-like X 48469802 48490708 - 116887876 MODEL JAAIVD010000014 pseudo 625847803 LOC116900805 kunitz-type protease inhibitor 4-like 5 153260048 153262366 - 22301074 116900805 MODEL JAAIVD010000023;XM_032902521 XP_032758412 protein-coding 625847807 Chpf chondroitin polymerizing factor ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 4 148824836 148829538 - 22301074;30032202 116899536 MODEL JAAIVD010000003;XM_032901412;XM_032901413 XP_032757303;XP_032757304 chondroitin sulfate synthase 2 protein-coding 625847818 Ppp2ca protein phosphatase 2 catalytic subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); enzyme binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to calcium ion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH asthma (ortholog); congestive heart failure (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 9 34685976 34706593 + 2554256;30032202 116908563 MODEL JAAIVD010000002;X16043;XM_032911767 CAA34166;XP_032767658 serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform protein-coding 625847829 Aldoa aldolase, fructose-bisphosphate A ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); binding of sperm to zona pellucida (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); Endotoxemia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); extracellular exosome (ortholog) 2 75098106 75102098 + 22301074;30032202 116891506 MODEL JAAIVD010000001;XM_032892639 XP_032748530 fructose-bisphosphate aldolase A protein-coding 625847843 Megf8 multiple EGF like domains 8 INVOLVED IN aorta development (ortholog); BMP signaling pathway (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Carpenter syndrome (ortholog); Carpenter syndrome 2 (ortholog); craniosynostosis (ortholog); FOUND IN nucleus (ortholog); ubiquitin ligase complex (ortholog) 2 169350586 169398556 - 22301074 116892461 MODEL JAAIVD010000001;XM_032894177 XP_032750068 multiple epidermal growth factor-like domains protein 8 protein-coding 625847888 LOC116893889 integrin alpha-X 2 73775368 73795930 - 22301074;30032202 116893889 MODEL JAAIVD010000001;XM_032895608;XM_032895609 XP_032751499;XP_032751500 protein-coding 625847925 Si sucrase-isomaltase ENCODES a protein that exhibits beta-fructofuranosidase activity (ortholog); oligo-1,6-glucosidase activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); intestinal epithelial cell maturation (ortholog); response to cortisone (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH colitis (ortholog); congenital sucrase-isomaltase deficiency (ortholog); exocrine pancreatic insufficiency (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 3 83222673 83303117 + 22301074;30032202 116895461 MODEL JAAIVD010000012;XM_032896729 XP_032752620 sucrase-isomaltase, intestinal protein-coding 625847976 LOC116897776 60S ribosomal protein L31-like 4 3001422 3001808 + 116897776 MODEL JAAIVD010000003 pseudo 625847977 Ccl22 C-C motif chemokine ligand 22 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog) 17 1634770 1640980 + 22301074;30032202 116886467 MODEL JAAIVD010000011;XM_032887969 XP_032743860 C-C motif chemokine 22 protein-coding 625847984 LOC116902688 HIG1 domain family member 1A, mitochondrial-like 6 39855511 39855785 + 116902688 MODEL JAAIVD010000024 pseudo 625847985 Rgmb repulsive guidance molecule BMP co-receptor b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell adhesion (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); plasma membrane (ortholog) 14 186946 213168 + 30032202 116883300 MODEL JAAIVD010000009;XM_032884345;XM_032884346;XM_032884347;XM_032884348 XP_032740236;XP_032740237;XP_032740238;XP_032740239 RGM domain family member B protein-coding 625848002 Panx1 pannexin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ATP transport (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the electrical synapse; ASSOCIATED WITH Acute Liver Failure (ortholog); autosomal recessive polycystic kidney disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN bleb (ortholog); endoplasmic reticulum (ortholog); gap junction (ortholog) 8 10803798 10841293 - 30032202 116906795 MODEL JAAIVD010000027;XM_032909661 XP_032765552 pannexin-1 protein-coding 625848011 Atad5 ATPase family AAA domain containing 5 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); neurilemmoma (ortholog); ovarian carcinoma (ortholog); FOUND IN Elg1 RFC-like complex (ortholog); nucleus (ortholog) 9 90293627 90341150 - 22301074;30032202 116909126 MODEL JAAIVD010000002;XM_032912602;XM_032912603 XP_032768493;XP_032768494 ATPase family AAA domain-containing protein 5 protein-coding 625848039 LOC116903054 taste receptor type 2 member 129-like 6 15918645 15919608 + 22301074;30032202 116903054 MODEL JAAIVD010000024;XM_032905353 XP_032761244 protein-coding 625848042 Tigd5 tigger transposable element derived 5 1 248228932 248233030 + 22301074;30032202 116912694 MODEL JAAIVD010000025;XM_032916828 XP_032772719 tigger transposable element-derived protein 5 protein-coding 625848047 Tceal9 transcription elongation factor A like 9 ENCODES a protein that exhibits WW domain binding (ortholog) X 88249168 88251199 + 116888875 MODEL JAAIVD010000014;XM_032890139;XM_032890140;XM_032890141 XP_032746030;XP_032746031;XP_032746032 transcription elongation factor A protein-like 9 protein-coding 625848062 Med14 mediator complex subunit 14 ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN cortisol signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH endometriosis (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) X 8631948 8714990 + 22301074;30032202 116888990 MODEL JAAIVD010000014;XM_032890208 XP_032746099 mediator of RNA polymerase II transcription subunit 14 protein-coding 625848097 Supt7l SPT7 like, STAGA complex subunit gamma ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH FISCHER-ZIRNSAK PROGEROID SYNDROME (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) 7 22642572 22653525 + 22301074;30032202 116905967 MODEL JAAIVD010000026;XM_032908972 XP_032764863 STAGA complex 65 subunit gamma protein-coding 625848106 Igfbp6 insulin like growth factor binding protein 6 ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of MAPK cascade (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); breast cancer (ortholog); contact dermatitis (ortholog); FOUND IN extracellular space (ortholog); insulin-like growth factor binary complex (ortholog) 1 260925911 260930882 - 22301074;30032202 116890197 MODEL JAAIVD010000025;XM_032890932 XP_032746823 insulin-like growth factor-binding protein 6 protein-coding 625848114 LOC116910036 macrophage migration inhibitory factor-like 9 69918357 69918706 + 30032202 116910036 MODEL JAAIVD010000002;XM_032913821 XP_032769712 protein-coding 625848118 Pkdcc protein kinase domain containing, cytoplasmic ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); embryonic digestive tract development (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); RHIZOMELIC LIMB SHORTENING WITH DYSMORPHIC FEATURES (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) 7 9714142 9723883 - 22301074;30032202 116905799 MODEL JAAIVD010000026;XM_032908773 XP_032764664 extracellular tyrosine-protein kinase PKDCC protein-coding 625848129 LOC116904614 taste receptor type 2 member 7 6 16728006 16728944 + 22301074;30032202 116904614 MODEL JAAIVD010000024;XM_032907407 XP_032763298 protein-coding 625848132 Lsm1 LSM1 homolog, mRNA degradation associated ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); negative regulation of neuron differentiation (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); developmental and epileptic encephalopathy 11 (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 13 60697417 60713458 - 30032202 116914278 MODEL JAAIVD010000008;XM_032918501 XP_032774392 U6 snRNA-associated Sm-like protein LSm1 protein-coding 625848140 LOC116900257 40S ribosomal protein S15-like 5 63150002 63150425 - 116900257 MODEL JAAIVD010000023 pseudo 625848141 LOC116911895 U6 spliceosomal RNA 10 22092688 22092749 + 116911895 MODEL JAAIVD010000005 pseudo 625848142 Tor3a torsin family 3 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 10 35998738 36024525 - 22301074;30032202 116911106 MODEL JAAIVD010000005;XM_032914948 XP_032770839 torsin-3A protein-coding 625848152 LOC116908260 40S ribosomal protein SA-like 8 98610871 98611729 - 116908260 MODEL JAAIVD010000027 pseudo 625848153 Pcid2 PCI domain containing 2 INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); negative regulation of lymphoid progenitor cell differentiation (ortholog); poly(A)+ mRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore nuclear basket (ortholog); nucleus (ortholog) 13 70581986 70609113 + 30032202 116914593 MODEL JAAIVD010000008;XM_032918954 XP_032774845 PCI domain-containing protein 2 protein-coding 625848171 Tmem207 transmembrane protein 207 ASSOCIATED WITH epidermal appendage tumor (ortholog); FOUND IN early endosome membrane (ortholog) 4 13677043 13696052 + 116897840 MODEL JAAIVD010000003;XM_032899256 XP_032755147 protein-coding 625848179 Kcnk3 potassium two pore domain channel subfamily K member 3 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); open rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to hypoxia (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 7 23453006 23490667 - 22301074;30032202 116906005 MODEL JAAIVD010000026;XM_032909045 XP_032764936 potassium channel subfamily K member 3 protein-coding 625848185 LOC116905618 L-lactate dehydrogenase A chain-like 7 17651183 17652166 - 116905618 MODEL JAAIVD010000026 pseudo 625848186 LOC116883597 cathepsin R 14 77109100 77114623 + 30032202 116883597 MODEL JAAIVD010000009;XM_032884778 XP_032740669 protein-coding 625848198 LOC116914607 uncharacterized LOC116914607 13 14415757 14427928 + 116914607 MODEL JAAIVD010000008;XR_004389756 ncrna 625848203 Epb41l2 erythrocyte membrane protein band 4.1 like 2 ENCODES a protein that exhibits PH domain binding (ortholog); spectrin binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); COP9 signalosome (ortholog) 2 211413571 211576492 + 22301074;30032202 116892955 MODEL JAAIVD010000001;XM_032894906 XP_032750797 band 4.1-like protein 2 protein-coding 625848227 LOC116885933 purine nucleoside phosphorylase-like 16 21232594 21233498 - 116885933 MODEL JAAIVD010000004 pseudo 625848228 LOC116891804 olfactory receptor 52B4-like 2 102491373 102492323 + 22301074 116891804 MODEL JAAIVD010000001;XM_032893160 XP_032749051 protein-coding 625848231 Adgrg5 adhesion G protein-coupled receptor G5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 17 1801665 1820506 + 22301074;30032202 116886263 MODEL JAAIVD010000011;XM_032887685 XP_032743576 adhesion G-protein coupled receptor G5 protein-coding 625848247 LOC116913239 dnaJ homolog subfamily B member 6-like 12 75413997 75415697 + 30032202 116913239 MODEL JAAIVD010000007;XM_032917403 XP_032773294 protein-coding 625848253 LOC116893470 homeobox protein ceh-37-like 2 180228423 180229920 + 22301074;30032202 116893470 MODEL JAAIVD010000001;XM_032895228 XP_032751119 protein-coding 625848258 LOC116912722 neo-calmodulin-like 11 58254509 58254751 - 116912722 MODEL JAAIVD010000006;XM_032916855 XP_032772746 protein-coding 625848261 Zp2 zona pellucida glycoprotein 2 ENCODES a protein that exhibits acrosin binding (ortholog); identical protein binding (ortholog); structural constituent of egg coat (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); prevention of polyspermy (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 6 (ortholog); FOUND IN egg coat (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 2 81535856 81553831 + 30032202 116891586 MODEL JAAIVD010000001;XM_032892766 XP_032748657 zona pellucida sperm-binding protein 2 protein-coding 625848283 Stim1 stromal interaction molecule 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); channel activator activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); detection of calcium ion (ortholog); enamel mineralization (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); common variable immunodeficiency 10 (ortholog); congenital structural myopathy (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 102173443 102331809 + 22301074;30032202 116891800 MODEL JAAIVD010000001;XM_032893154;XM_032893155;XM_032893157 XP_032749045;XP_032749046;XP_032749048 protein-coding 625848307 LOC116897532 small nucleolar RNA SNORA48 3 19987980 19988121 - 116897532 MODEL JAAIVD010000012;XR_004387547 snorna 625848310 Aqp7 aquaporin 7 ENCODES a protein that exhibits glycerol channel activity (ortholog); urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); renal water absorption (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH colitis (ortholog); Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN brush border membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 117127798 117141913 + 30032202 116889046 MODEL JAAIVD010000025;XM_032890240;XM_032890245;XM_032890248 XP_032746131;XP_032746136;XP_032746139 aquaporin-7 protein-coding 625848327 Grik5 glutamate ionotropic receptor kainate type subunit 5 ENCODES a protein that exhibits glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); chemical synaptic transmission (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Seizures (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 2 169634743 169695614 + 22301074;30032202 116892472 MODEL JAAIVD010000001;XM_032894197 XP_032750088 glutamate receptor ionotropic, kainate 5 protein-coding 625848351 Rab2b RAB2B, member RAS oncogene family INVOLVED IN defense response to virus (ortholog); Golgi organization (ortholog); innate immune response (ortholog); FOUND IN acrosomal vesicle (ortholog); autophagosome membrane (ortholog); Golgi apparatus (ortholog) 12 71612996 71630679 + 22301074;30032202 116913946 MODEL JAAIVD010000007;XM_032918211 XP_032774102 ras-related protein Rab-2B protein-coding 625848363 LOC116913460 tumor necrosis factor receptor superfamily member 10B-like 12 54551834 54572256 - 22301074;30032202 116913460 MODEL JAAIVD010000007;XM_032917662 XP_032773553 protein-coding 625848375 Cfap77 cilia and flagella associated protein 77 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 5 7624577 7746851 + 116900064 MODEL JAAIVD010000023;XM_032901853 XP_032757744 cilia- and flagella-associated protein 77 protein-coding 625848385 LOC116900323 olfactory receptor 1052-like 5 64403585 64404523 - 22301074;30032202 116900323 MODEL JAAIVD010000023;XM_032902079 XP_032757970 protein-coding 625848388 LOC116898976 uncharacterized LOC116898976 4 51922059 51924354 + 116898976 MODEL JAAIVD010000003;XM_032900401 XP_032756292 uncharacterized protein LOC116898976 protein-coding 625848393 Apaf1 apoptotic peptidase activating factor 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cardiac muscle cell apoptotic process (ortholog); cell differentiation (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); colon cancer (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 170071689 170158638 - 22301074 116908116 MODEL JAAIVD010000025;XM_032911402 XP_032767293 apoptotic protease-activating factor 1 protein-coding 625848424 Mybbp1a MYB binding protein 1a ENCODES a protein that exhibits E-box binding (ortholog); sequence-specific DNA binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); circadian regulation of gene expression (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Meniere's disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN B-WICH complex (ortholog); cytoplasm (ortholog); NLS-dependent protein nuclear import complex (ortholog) 9 43068873 43079620 - 22301074;30032202 116908517 MODEL JAAIVD010000002;XM_032911692 XP_032767583 myb-binding protein 1A protein-coding 625848454 LOC116887665 60S ribosomal protein L39-like 18 28354948 28355104 + 116887665 MODEL JAAIVD010000013 pseudo 625848455 LOC116895836 glyceraldehyde-3-phosphate dehydrogenase-like 3 80778503 80779494 - 116895836 MODEL JAAIVD010000012 pseudo 625848456 LOC116903646 microtubule-associated proteins 1A/1B light chain 3B-like 6 154587959 154588565 + 116903646 MODEL JAAIVD010000024 pseudo 625848457 LOC116885848 vomeronasal type-2 receptor 116-like 16 2997157 3144659 + 116885848 MODEL JAAIVD010000004 pseudo 625848458 LOC116907762 olfactory receptor 10S1 8 82837836 82838801 + 22301074 116907762 MODEL JAAIVD010000027;XM_032910901 XP_032766792 protein-coding 625848461 LOC116884421 60S ribosomal protein L32-like 15 75521800 75522183 - 116884421 MODEL JAAIVD010000010 pseudo 625848462 Zfat zinc finger and AT-hook domain containing ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); hemopoiesis (ortholog); spongiotrophoblast layer development (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog) 14 40197556 40376092 + 30032202 116883743 MODEL JAAIVD010000009;XM_032884972;XM_032884973;XM_032884974;XM_032884975;XM_032884977 XP_032740863;XP_032740864;XP_032740865;XP_032740866;XP_032740868 zinc finger protein ZFAT protein-coding 625848499 Mamdc4 MAM domain containing 4 ENCODES a protein that exhibits protein histidine phosphatase activity (ortholog); INVOLVED IN protein localization to nucleus (ortholog); Wnt signaling pathway (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Wnt signalosome (ortholog) 5 11607446 11615662 + 22301074 116900025 MODEL JAAIVD010000023;XM_032901822 XP_032757713 apical endosomal glycoprotein protein-coding 625848530 LOC116900381 olfactory receptor 5D18-like 5 69610264 69611205 - 22301074;30032202 116900381 MODEL JAAIVD010000023;XM_032902129 XP_032758020 protein-coding 625848533 Dpep1 dipeptidase 1 ENCODES a protein that exhibits beta-lactamase activity (ortholog); dipeptidase activity (ortholog); GPI anchor binding (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); cellular response to calcium ion (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH Chemically-Induced Disorders (ortholog); hepatoblastoma (ortholog); osteoarthritis (ortholog); FOUND IN apical part of cell (ortholog); cell junction (ortholog); endoplasmic reticulum membrane (ortholog) 17 42799093 42806711 + 22301074;30032202 116886453 MODEL JAAIVD010000011;XM_032887953 XP_032743844 protein-coding 625848547 Tmem127 transmembrane protein 127 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of TOR signaling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); plasma membrane (ortholog) 5 106027481 106040580 + 30032202 116901932 MODEL JAAIVD010000023;XM_032904155;XM_032904156 XP_032760046;XP_032760047 protein-coding 625848558 LOC116905752 high mobility group protein B1-like 7 77843233 77843869 + 116905752 MODEL JAAIVD010000026 pseudo 625848559 LOC116888291 DDB1- and CUL4-associated factor 12-like protein 1 X 108554754 108556910 - 22301074;30032202 116888291 MODEL JAAIVD010000014;XM_032889565 XP_032745456 protein-coding 625848565 Pygm glycogen phosphorylase, muscle associated ENCODES a protein that exhibits AMP binding (ortholog); carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN sarcoplasmic reticulum (ortholog) 2 1284896 1299491 - 22301074;30032202 116890658 MODEL JAAIVD010000001;XM_032891046 XP_032746937 glycogen phosphorylase, muscle form protein-coding 625848589 Arhgef12 Rho guanine nucleotide exchange factor 12 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of blood pressure (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH glaucoma (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog) 8 37558533 37681501 - 22301074;30032202 116907118 MODEL JAAIVD010000027;XM_032910092 XP_032765983 protein-coding 625848634 LOC116895469 40S ribosomal protein S6-like 3 85348169 85348893 + 116895469 MODEL JAAIVD010000012 pseudo 625848635 Hrct1 histidine rich carboxyl terminus 1 1 2768371 2769147 - 116885852 MODEL JAAIVD010000025;XM_032887188 XP_032743079 histidine-rich carboxyl terminus protein 1 protein-coding 625848640 Tbx2 T-box transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); apoptotic process (ortholog); atrioventricular canal development (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); Conotruncal Cardiac Defects (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 9 84902637 84911457 - 22301074;30032202 116908904 MODEL JAAIVD010000002;XM_032912359 XP_032768250 T-box transcription factor TBX2 protein-coding 625848650 LOC116898829 uncharacterized LOC116898829 1 41661761 41673088 - 116898829 MODEL JAAIVD010000025;XR_004387665;XR_004387666 ncrna 625848658 Glt6d1 glycosyltransferase 6 domain containing 1 5 11269920 11278385 + 22301074;30032202 116900085 MODEL JAAIVD010000023;XM_032901867 XP_032757758 putative glycosyltransferase 6 domain-containing protein 1 protein-coding 625848665 Thsd1 thrombospondin type 1 domain containing 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Hydrops Fetalis (ortholog); intracranial berry aneurysm 12 (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 64179257 64215666 - 30032202 116914796 MODEL JAAIVD010000008;XM_032919244;XM_032919245;XM_032919246 XP_032775135;XP_032775136;XP_032775137 thrombospondin type-1 domain-containing protein 1 protein-coding 625848678 Rgs7bp regulator of G protein signaling 7 binding protein INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of postsynaptic membrane potential (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) 3 192303938 192420453 + 30032202 116897220 MODEL JAAIVD010000012;XM_032898939;XM_032898940;XM_032898941 XP_032754830;XP_032754831;XP_032754832 regulator of G-protein signaling 7-binding protein protein-coding 625848696 Ptpn13 protein tyrosine phosphatase non-receptor type 13 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular response to toxic substance (ortholog); negative regulation of excitatory synapse assembly (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH breast cancer (ortholog); colon cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); lamellipodium (ortholog) 11 13519095 13693416 + 22301074;30032202 116912376 MODEL JAAIVD010000006;XM_032916433 XP_032772324 tyrosine-protein phosphatase non-receptor type 13 protein-coding 625848748 LOC116886427 leptin receptor overlapping transcript-like 1 17 22865141 22866603 - 30032202 116886427 MODEL JAAIVD010000011;XM_032887913 XP_032743804 protein-coding 625848753 LOC116910754 U12 minor spliceosomal RNA 9 78127964 78128114 - 116910754 MODEL JAAIVD010000002;XR_004389265 snrna 625848756 LOC116914109 small nucleolar RNA SNORA32 12 28383885 28384006 - 116914109 MODEL JAAIVD010000007;XR_004389675 snorna 625848759 LOC116891076 uncharacterized LOC116891076 2 29774694 29776255 - 116891076 MODEL JAAIVD010000001;XR_004386810 ncrna 625848764 Junb JunB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anaplastic large cell lymphoma (ortholog); colon cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 17 15311823 15313722 + 30032202 116886037 MODEL JAAIVD010000011;XM_032887333 XP_032743224 transcription factor jun-B protein-coding 625848769 LOC116886858 heterogeneous nuclear ribonucleoprotein A3-like 1 217059710 217060376 + 116886858 MODEL JAAIVD010000025 pseudo 625848770 LOC116900504 olfactory receptor 8K3-like 5 72354720 72355661 + 22301074;30032202 116900504 MODEL JAAIVD010000023;XM_032902240 XP_032758131 protein-coding 625848773 LOC116886726 small nucleolar RNA SNORA2/SNORA34 family 17 43518235 43518364 + 116886726 MODEL JAAIVD010000011 pseudo 625848774 LOC116896670 gametogenetin-like 3 64729280 64736750 + 116896670 MODEL JAAIVD010000012;XM_032898039 XP_032753930 protein-coding 625848780 LOC116905690 acyl-coenzyme A amino acid N-acyltransferase 2 7 57440314 57444430 + 22301074;30032202 116905690 MODEL JAAIVD010000026;XM_032908674 XP_032764565 protein-coding 625848787 LOC116901337 uncharacterized LOC116901337 5 12789531 12790066 - 116901337 MODEL JAAIVD010000023;XR_004387978 ncrna 625848791 Celsr2 cadherin EGF LAG seven-pass G-type receptor 2 INVOLVED IN cerebrospinal fluid secretion (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Developmental Disabilities (ortholog); endometrial hyperplasia (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 49842272 49866622 + 22301074 116896362 MODEL JAAIVD010000012;XM_032897471;XM_032897472;XM_032897473;XM_032897474 XP_032753362;XP_032753363;XP_032753364;XP_032753365 protein-coding 625848836 LOC116897067 60S ribosomal protein L7a-like 3 154940555 154941343 + 116897067 MODEL JAAIVD010000012 pseudo 625848837 Ankrd13d ankyrin repeat domain 13D ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 2 3362959 3375076 + 22301074;30032202 116890773 MODEL JAAIVD010000001;XM_032891239 XP_032747130 ankyrin repeat domain-containing protein 13D protein-coding 625848856 LOC116908385 small nucleolar RNA SNORA48 8 30688934 30689066 + 116908385 MODEL JAAIVD010000027 pseudo 625848857 Pcca propionyl-CoA carboxylase subunit alpha ENCODES a protein that exhibits enzyme binding (ortholog); propionyl-CoA carboxylase activity (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); pontocerebellar hypoplasia type 2D (ortholog); FOUND IN catalytic complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 2006261 2310828 - 22301074;30032202 116913625 MODEL JAAIVD010000007;XM_032917889;XM_032917890;XM_032917891 XP_032773780;XP_032773781;XP_032773782 propionyl-CoA carboxylase alpha chain, mitochondrial protein-coding 625848893 LOC116888283 interferon-stimulated 20 kDa exonuclease-like 2 X 23335595 23336684 - 116888283 MODEL JAAIVD010000014 pseudo 625848894 Vsig10 V-set and immunoglobulin domain containing 10 16 36474638 36510656 - 30032202 116885499 MODEL JAAIVD010000004;XM_032886791 XP_032742682 V-set and immunoglobulin domain-containing protein 10 protein-coding 625848907 Znf324 zinc finger protein 324 INVOLVED IN cell population proliferation (ortholog); G1/S transition of mitotic cell cycle (ortholog) 2 174215257 174221117 - 30032202 116892620 MODEL JAAIVD010000001;XM_032894426;XM_032894427 XP_032750317;XP_032750318 zinc finger protein 324A protein-coding 625848919 LOC116888130 60S ribosomal protein L15-like X 105514511 105517481 + 116888130 MODEL JAAIVD010000014 pseudo 625848920 LOC116893759 tektin-5-like 2 29037861 29039322 - 30032202 116893759 MODEL JAAIVD010000001;XM_032895462 XP_032751353 protein-coding 625848925 Pik3c2g phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 gamma ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN chemotaxis (ortholog); phosphatidylinositol-3-phosphate biosynthetic process (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog) 6 9599769 9895190 - 22301074;30032202 116904527 MODEL JAAIVD010000024;XM_032907317;XM_032907318;XM_032907319 XP_032763208;XP_032763209;XP_032763210 phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit gamma protein-coding 625848969 LOC116911511 olfactory receptor 10J1-like 10 52231139 52232070 - 22301074 116911511 MODEL JAAIVD010000005;XM_032915500 XP_032771391 protein-coding 625848972 LOC116883450 putative olfactory receptor 2W6 14 41279080 41280027 - 22301074 116883450 MODEL JAAIVD010000009;XM_032884596 XP_032740487 protein-coding 625848976 Srsf9 serine and arginine rich splicing factor 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); response to alkaloid (ortholog); response to toxic substance (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); human immunodeficiency virus infectious disease (ortholog); urinary bladder cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 16 38489549 38495673 - 30032202 116885967 MODEL JAAIVD010000004;XM_032887302;XM_032887303 XP_032743193;XP_032743194 serine/arginine-rich splicing factor 9 protein-coding 625848986 Chmp4c charged multivesicular body protein 4C ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); Flemming body (ortholog) 3 144415334 144442628 + 30032202 116897037 MODEL JAAIVD010000012;XM_032898658 XP_032754549 protein-coding 625848995 Awat1 acyl-CoA wax alcohol acyltransferase 1 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway X 58321199 58327277 + 30032202 116888252 MODEL JAAIVD010000014;XM_032889535 XP_032745426 protein-coding 625849006 LOC116906066 N-alpha-acetyltransferase 10-like 7 54093072 54093601 + 116906066 MODEL JAAIVD010000026 pseudo 625849007 Matn2 matrilin 2 INVOLVED IN axon guidance (ortholog); dendrite regeneration (ortholog); glial cell migration (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); matrilin complex (ortholog) 1 207998810 208136952 + 22301074 116910461 MODEL JAAIVD010000025;XM_032914335 XP_032770226 matrilin-2 protein-coding 625849030 Mael maelstrom spermatogenic transposon silencer INVOLVED IN cell morphogenesis (ortholog); DNA damage response (ortholog); ectopic germ cell programmed cell death (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN autosome (ortholog); chromatin (ortholog); chromatoid body (ortholog) 10 45297232 45336669 - 22301074;30032202 116911160 MODEL JAAIVD010000005;XM_032915021;XM_032915022 XP_032770912;XP_032770913 protein maelstrom homolog protein-coding 625849050 Pde2a phosphodiesterase 2A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); aorta development (ortholog); cardiac septum development (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 99730216 99822123 + 30032202 116891760 MODEL JAAIVD010000001;XM_032893083;XM_032893084;XM_032893085;XM_032893086 XP_032748974;XP_032748975;XP_032748976;XP_032748977 cGMP-dependent 3',5'-cyclic phosphodiesterase protein-coding 625849096 Kiaa0825 KIAA0825 ortholog ASSOCIATED WITH Postaxial Polydactyly (ortholog); Postaxial Polydactyly, Type A1 (ortholog); Postaxial Polydactyly, Type A10 (ortholog) 3 217873504 218256517 - 116897343 MODEL JAAIVD010000012;XM_032899100 XP_032754991 uncharacterized protein KIAA0825 homolog protein-coding 625849117 Mkln1 muskelin 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell-matrix adhesion (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Lung Injury (ortholog); pulmonary fibrosis (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 108085157 108234117 - 22301074;30032202 116903992 MODEL JAAIVD010000024;XM_032906798;XM_032906799;XM_032906800 XP_032762689;XP_032762690;XP_032762691 muskelin protein-coding 625849145 Kprp keratinocyte proline rich protein INVOLVED IN desmosome organization (ortholog); epidermis development (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 3 120182822 120187124 - 116895524 MODEL JAAIVD010000012;XM_032896768;XM_032896769 XP_032752659;XP_032752660 keratinocyte proline-rich protein protein-coding 625849154 LOC116909317 brain-specific serine protease 4 9 1292335 1297534 - 22301074;9722524 116909317 O88781 MODEL AJ005642;JAAIVD010000002;XM_032912852 CAA06644;XP_032768743 bsp2 serine protease protein-coding 625849164 Dnajb4 DnaJ heat shock protein family (Hsp40) member B4 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); ASSOCIATED WITH congenital myopathy 21 (ortholog); distal myopathy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 9402503 9430857 + 22301074;30032202 116896159 MODEL JAAIVD010000012;XM_032897150;XM_032897151;XM_032897152 XP_032753041;XP_032753042;XP_032753043 dnaJ homolog subfamily B member 4 protein-coding 625849178 Naalad2 N-acetylated alpha-linked acidic dipeptidase 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); N-formylglutamate deformylase activity (ortholog); peptidase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); proteolysis (ortholog); FOUND IN membrane (ortholog) 8 14077948 14146428 - 30032202 116906857 MODEL JAAIVD010000027;XM_032909755 XP_032765646 N-acetylated-alpha-linked acidic dipeptidase 2 protein-coding 625849204 Pla2g6 phospholipase A2 group VI ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); calcium-independent phospholipase A2 activity (ortholog); identical protein binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cardiolipin acyl-chain remodeling (ortholog); maternal process involved in female pregnancy (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Binge Drinking (ortholog); cerebellar hypoplasia (ortholog); FOUND IN extracellular space (ortholog); microtubule cytoskeleton (ortholog); mitochondrion (ortholog) 1 262937882 262946092 - 22301074;30032202 116890219 MODEL JAAIVD010000025;XM_032890956 XP_032746847 85/88 kDa calcium-independent phospholipase A2 protein-coding 625849215 Angptl6 angiopoietin like 6 ASSOCIATED WITH COVID-19 (ortholog); gestational diabetes (ortholog); hepatocellular carcinoma (ortholog); FOUND IN secretory granule (ortholog) 8 17141956 17147953 - 30032202 116907093 MODEL JAAIVD010000027;XM_032910059;XM_032910060;XR_004388804 XP_032765950;XP_032765951 angiopoietin-related protein 6 protein-coding 625849230 Nkx6-3 NK6 homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell fate determination (ortholog); enteroendocrine cell differentiation (ortholog); glandular epithelial cell differentiation (ortholog) 13 63267425 63272565 - 22301074;30032202 116914738 MODEL JAAIVD010000008;XM_032919174 XP_032775065 homeobox protein Nkx-6.3 protein-coding 625849237 LOC116908242 40S ribosomal protein S24-like 8 84782246 84787033 - 116908242 MODEL JAAIVD010000027 pseudo 625849238 LOC116906937 platelet-activating factor acetylhydrolase IB subunit beta-like 8 77373367 77374194 + 116906937 MODEL JAAIVD010000027 pseudo 625849239 Rbbp9 RB binding protein 9, serine hydrolase ENCODES a protein that exhibits serine hydrolase activity (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); regulation of cell population proliferation (ortholog); response to nematode (ortholog); FOUND IN nucleoplasm (ortholog) 5 124188119 124194352 - 22301074 116902048 MODEL JAAIVD010000023;XM_032904334 XP_032760225 serine hydrolase RBBP9 protein-coding 625849248 Ncbp3 nuclear cap binding subunit 3 ENCODES a protein that exhibits mRNA binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); RNA cap binding (ortholog); INVOLVED IN defense response to virus (ortholog); mRNA export from nucleus (ortholog); snRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); nuclear cap binding complex (ortholog); nuclear speck (ortholog) 9 42432147 42462233 - 22301074;30032202 116909763 MODEL JAAIVD010000002;XM_032913449 XP_032769340 nuclear cap-binding protein subunit 3 protein-coding 625849265 Msh6 mutS homolog 6 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA repair (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); B-lymphoblastic leukemia/lymphoma with BCR-ABL1 (ortholog); bilateral breast cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 7 5010975 5027614 - 22301074;30032202 116905742 MODEL JAAIVD010000026;XM_032908709 XP_032764600 DNA mismatch repair protein Msh6 protein-coding 625849279 Matr3 matrin 3 ENCODES a protein that exhibits identical protein binding (ortholog); miRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); blastocyst formation (ortholog); heart valve development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 21 (ortholog); distal myopathy (ortholog); FOUND IN nuclear matrix (ortholog); nucleus (ortholog) 15 8777040 8805189 - 22301074;30032202 116884965 MODEL JAAIVD010000010;XM_032886170;XM_032886171;XM_032886172;XM_032886173 XP_032742061;XP_032742062;XP_032742063;XP_032742064 matrin-3 protein-coding 625849306 LOC116907901 40S ribosomal protein S21-like 1 158254994 158258870 + 116907901 MODEL JAAIVD010000025 pseudo 625849307 Ube3a ubiquitin protein ligase E3A ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to nutrient levels (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 2 140190254 140280280 + 22301074;30032202 116892034 MODEL JAAIVD010000001;XM_032893490;XM_032893491;XM_032893492;XM_032893493;XM_032893494;XR_004386906 XP_032749381;XP_032749382;XP_032749383;XP_032749384;XP_032749385 ubiquitin-protein ligase E3A protein-coding 625849339 LOC116890433 U7 small nuclear RNA 1 63381148 63381211 - 116890433 MODEL JAAIVD010000025;XR_004386631 snrna 625849342 Pinx1 PIN2 (TERF1) interacting telomerase inhibitor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); kinetochore (ortholog); mitochondrion (ortholog) 12 60486456 60544879 - 22301074;30032202 116914038 MODEL JAAIVD010000007;XM_032918318 XP_032774209 PIN2/TERF1-interacting telomerase inhibitor 1 protein-coding 625849353 Cd109 CD109 molecule INVOLVED IN hair follicle development (ortholog); negative regulation of keratinocyte proliferation (ortholog); negative regulation of stem cell proliferation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); High Myopia (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 8 72871786 72979922 + 22301074;30032202 116907960 MODEL JAAIVD010000027;XM_032911187 XP_032767078 CD109 antigen protein-coding 625849390 LOC116894602 vomeronasal type-1 receptor 2-like 2 181844681 181845575 - 116894602 MODEL JAAIVD010000001 pseudo 625849391 LOC116893907 uncharacterized LOC116893907 2 75591760 75592871 + 116893907 MODEL JAAIVD010000001;XR_004387011 ncrna 625849396 Glce glucuronic acid epimerase ENCODES a protein that exhibits calcium ion binding (ortholog); heparosan-N-sulfate-glucuronate 5-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan biosynthetic process (ortholog); negative regulation of cell projection organization (ortholog); ASSOCIATED WITH cerebrovascular disease (ortholog); hypertension (ortholog); FOUND IN Golgi apparatus (ortholog) 8 56365608 56435991 - 30032202 116906616 MODEL JAAIVD010000027;XM_032909374 XP_032765265 D-glucuronyl C5-epimerase protein-coding 625849405 LOC116914287 uncharacterized LOC116914287 13 42179527 42245748 - 116914287 MODEL JAAIVD010000008;XR_004389742 ncrna 625849410 Pbx2 PBX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); proximal/distal pattern formation (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 18 7275352 7280481 + 22301074;30032202 116886826 MODEL JAAIVD010000013;XM_032888258 XP_032744149 pre-B-cell leukemia transcription factor 2 protein-coding 625849423 LOC116889840 DNA polymerase I-like 22301074;30032202 116889840 MODEL JAAIVD010001803;XM_032890673 XP_032746564 protein-coding 625849424 Ndufb9 NADH:ubiquinone oxidoreductase subunit B9 ASSOCIATED WITH mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 24 (ortholog); Weight Gain (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 233459498 233465965 + 30032202 116911850 MODEL JAAIVD010000025;XM_032915805 XP_032771696 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 9 protein-coding 625849432 Ano6 anoctamin 6 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); bleb assembly (ortholog); blood coagulation (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chloride channel complex (ortholog); cholinergic synapse (ortholog); cytosol (ortholog) 1 268613213 268793707 + 22301074;30032202 116884372 MODEL JAAIVD010000025;XM_032885493;XM_032885496;XM_032885498;XM_032885502 XP_032741384;XP_032741387;XP_032741389;XP_032741393 anoctamin-6 protein-coding 625849466 LOC116898612 rRNA-processing protein FCF1 homolog 4 1507101 1507776 - 116898612 MODEL JAAIVD010000003 pseudo 625849467 Rxfp1 relaxin family peptide receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH endometriosis (ortholog) 3 73645875 73766849 + 22301074 116896759 MODEL JAAIVD010000012;XM_032898205;XM_032898206;XM_032898207 XP_032754096;XP_032754097;XP_032754098 relaxin receptor 1 protein-coding 625849494 LOC116908186 thrombospondin type-1 domain-containing protein 4-like 8 53830484 53856547 - 30032202 116908186 MODEL JAAIVD010000027;XM_032911473 XP_032767364 protein-coding 625849502 C1galt1c1 C1GALT1 specific chaperone 1 ENCODES a protein that exhibits glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity (ortholog); INVOLVED IN platelet activation (ortholog); platelet morphogenesis (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); congenital disorder of glycosylation (ortholog); HEMOLYTIC UREMIC SYNDROME, ATYPICAL, 8, WITH RHIZOMELIC SHORT STATURE (ortholog) X 101750834 101756060 + 30032202 116888807 MODEL JAAIVD010000014;XM_032890086;XM_032890087 XP_032745977;XP_032745978 C1GALT1-specific chaperone 1 protein-coding 625849513 LOC116888177 eukaryotic translation initiation factor 5-like X 117886945 117888325 + 30032202 116888177 MODEL JAAIVD010000014;XM_032889497 XP_032745388 protein-coding 625849517 LOC116912233 sulfotransferase 1 family member D1 11 1328185 1361325 + 22301074;30032202 116912233 MODEL JAAIVD010000006;XM_032916208 XP_032772099 protein-coding 625849529 LOC116889624 ribosome biogenesis regulatory protein homolog Y 1413058 1418304 + 116889624 MODEL JAAIVD010000015 pseudo 625849530 LOC116884597 40S ribosomal protein S23-like 15 40334124 40335278 + 116884597 MODEL JAAIVD010000010 pseudo 625849531 Spata2 spermatogenesis associated 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor complex adaptor activity (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN necroptotic process (ortholog); protein K63-linked deubiquitination (ortholog); protein linear deubiquitination (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 5 150500774 150508788 + 30032202 116902311 MODEL JAAIVD010000023;XM_032904756 XP_032760647 spermatogenesis-associated protein 2 protein-coding 625849537 LOC116890461 small nucleolar RNA SNORD104 1 22665753 22665822 + 116890461 MODEL JAAIVD010000025;XR_004386653 snorna 625849540 Rfc1 replication factor C subunit 1 ENCODES a protein that exhibits DNA clamp unloader activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN FasL mediated signaling pathway; mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Bilateral Vestibulopathy (ortholog); cerebellar ataxia (ortholog); Cerebellar Ataxia, Neuropathy, and Vestibular Areflexia Syndrome (ortholog); FOUND IN DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog); nucleoplasm (ortholog) 11 22279164 22352880 - 22301074;30032202 116912211 MODEL JAAIVD010000006;XM_032916158;XM_032916159;XM_032916160;XM_032916161 XP_032772049;XP_032772050;XP_032772051;XP_032772052 protein-coding 625849574 Irs1 insulin receptor substrate 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); coronary artery disease (ortholog); FOUND IN caveola (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 4 155129339 155184611 - 30032202 116899561 MODEL JAAIVD010000003;XM_032901457 XP_032757348 protein-coding 625849580 LOC116912565 uncharacterized LOC116912565 11 10638077 10639964 - 116912565 MODEL JAAIVD010000006;XR_004389468 ncrna 625849584 Arx aristaless related homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex GABAergic interneuron migration (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Aicardi syndrome (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) 7 113217391 113229272 - 22301074;30032202 116905353 MODEL JAAIVD010000026;XM_032908268 XP_032764159 homeobox protein ARX protein-coding 625849593 LOC116913897 cytochrome b-c1 complex subunit 9-like 12 22958141 22958525 + 22301074;30032202 116913897 MODEL JAAIVD010000007;XM_032918180 XP_032774071 protein-coding 625849597 Slc12a3 solute carrier family 12 member 3 ENCODES a protein that exhibits enzyme binding (ortholog); protein serine/threonine kinase binding (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); renal sodium ion absorption (ortholog); response to aldosterone (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH aortic disease (ortholog); Bartter disease (ortholog); essential hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular exosome (ortholog) 17 1236697 1272974 + 22301074;30032202 116886442 MODEL JAAIVD010000011;XM_032887934 XP_032743825 protein-coding 625849626 LOC116899824 small nucleolar RNA SNORA43 4 150370879 150371008 + 116899824 MODEL JAAIVD010000003;XR_004387824 snorna 625849629 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 38164973 38165054 - 116906526 MODEL JAAIVD010000026 trna 625849630 LOC116890073 olfactory receptor 9K2-like 1 215025684 215026679 - 22301074;30032202 116890073 MODEL JAAIVD010000025;XM_032890836 XP_032746727 protein-coding 625849634 LOC116907015 C-C chemokine receptor type 1 8 115025981 115031536 - 22301074;30032202 116907015 MODEL JAAIVD010000027;XM_032909949 XP_032765840 protein-coding 625849640 LOC116910929 vomeronasal type-1 receptor 51-like 10 60479441 60491921 - 116910929 MODEL JAAIVD010000005 pseudo 625849641 LOC116886748 small nucleolar RNA SNORD71 17 29550585 29550668 + 116886748 MODEL JAAIVD010000011;XR_004386151 snorna 625849644 LOC116883995 NSFL1 cofactor p47-like 14 27561909 27563031 + 116883995 MODEL JAAIVD010000009 pseudo 625849645 Coasy Coenzyme A synthase ENCODES a protein that exhibits dephospho-CoA kinase activity (ortholog); pantetheine-phosphate adenylyltransferase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); mucopolysaccharidosis III (ortholog); Myopathy with Abnormal Lipid Metabolism (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 60377139 60381193 + 22301074;30032202 116908877 MODEL JAAIVD010000002;XM_032912322 XP_032768213 bifunctional coenzyme A synthase protein-coding 625849659 Bhlhe40 basic helix-loop-helix family member e40 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); bipolar disorder (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) 6 38132293 38138492 - 22301074;30032202 116903439 MODEL JAAIVD010000024;XM_032905992 XP_032761883 class E basic helix-loop-helix protein 40 protein-coding 625849668 Srcin1 SRC kinase signaling inhibitor 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); conditioned place preference (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cytoplasm (ortholog) 9 56810422 56872647 + 30032202 116908748 MODEL JAAIVD010000002;XM_032912101 XP_032767992 protein-coding 625849692 LOC116906075 Ig heavy chain V region 108A-like 7 62731592 62732100 - 116906075 MODEL JAAIVD010000026 pseudo 625849693 Atp13a4 ATPase 13A4 INVOLVED IN intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH congenital myopathy 1A (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); late endosome membrane (ortholog) 4 14297726 14434361 - 22301074;30032202 116897842 MODEL JAAIVD010000003;XM_032899257 XP_032755148 probable cation-transporting ATPase 13A4 protein-coding 625849727 Cttnbp2 cortactin binding protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN regulation of modification of postsynaptic actin cytoskeleton (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog); glutamatergic synapse (ortholog) 6 120190256 120348485 - 22301074;30032202 116904053 MODEL JAAIVD010000024;XM_032906912 XP_032762803 cortactin-binding protein 2 protein-coding 625849754 Eef2 eukaryotic translation elongation factor 2 ENCODES a protein that exhibits 5S rRNA binding (ortholog); actin filament binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); glial cell proliferation (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN mTOR signaling pathway; translation elongation pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); brain glioblastoma multiforme (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 153706645 153712126 - 22301074;30032202 116904541 MODEL JAAIVD010000025;XM_032907338 XP_032763229 elongation factor 2 protein-coding 625849769 Slc4a9 solute carrier family 4 member 9 ENCODES a protein that exhibits chloride:bicarbonate antiporter activity (ortholog); sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN monoatomic anion transport (ortholog); saliva secretion (ortholog); sodium ion transmembrane transport (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 15 7839642 7855574 - 22301074;30032202 116884496 MODEL JAAIVD010000010;XM_032885619;XM_032885620;XM_032885621;XM_032885622;XM_032885623;XM_032885624 XP_032741510;XP_032741511;XP_032741512;XP_032741513;XP_032741514;XP_032741515 anion exchange protein 4 protein-coding 625849806 Alcam activated leukocyte cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 4 36516752 36710837 - 30032202 116898892 MODEL JAAIVD010000003;XM_032900289;XM_032900290 XP_032756180;XP_032756181 CD166 antigen protein-coding 625849829 Pde3a phosphodiesterase 3A ENCODES a protein that exhibits 3',5'-cGMP-inhibited cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to cGMP (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); hypertension and brachydactyly syndrome (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 6 8075290 8341783 - 30032202 116903135 MODEL JAAIVD010000024;XM_032905490 XP_032761381 cGMP-inhibited 3',5'-cyclic phosphodiesterase A protein-coding 625849849 LOC116894002 olfactory receptor 51Q1-like 2 101622788 101623753 - 22301074 116894002 MODEL JAAIVD010000001;XM_032895718 XP_032751609 protein-coding 625849852 Tinag tubulointerstitial nephritis antigen INVOLVED IN cell adhesion (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog) 8 71217446 71303425 - 22301074;30032202 116907734 MODEL JAAIVD010000027;XM_032910861 XP_032766752 protein-coding 625849867 LOC116905020 Ig heavy chain V region 102-like 7 62640115 62640568 + 116905020 MODEL JAAIVD010000026 pseudo 625849868 Ikzf2 IKAROS family zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cochlear outer hair cell electromotile response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); COVID-19 (ortholog); FOUND IN nucleus (ortholog) 4 143297280 143434990 - 30032202 116899473 MODEL JAAIVD010000003;XM_032901295 XP_032757186 zinc finger protein Helios protein-coding 625849880 Hsbp1l1 heat shock factor binding protein 1 like 1 15 51990486 51996342 + 22301074;30032202 116884607 MODEL JAAIVD010000010;XM_032885748 XP_032741639 heat shock factor-binding protein 1-like protein 1 protein-coding 625849889 LOC116907571 placenta-expressed transcript 1 protein 8 44964517 44976376 + 30032202 116907571 MODEL JAAIVD010000027;XM_032910603 XP_032766494 protein-coding 625849897 Spink5 serine peptidase inhibitor Kazal type 5 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); negative regulation of antibacterial peptide biosynthetic process (ortholog); negative regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Exfoliative Dermatitis (ortholog); genetic disease (ortholog); Netherton syndrome (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 121162 181554 + 22301074 116895250 MODEL JAAIVD010000012;XM_032896569 XP_032752460 serine protease inhibitor Kazal-type 5 protein-coding 625849933 Nsun2 NOP2/Sun RNA methyltransferase 2 ENCODES a protein that exhibits mRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA (cytidine-5-)-methyltransferase activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); in utero embryonic development (ortholog); meiotic cell cycle checkpoint signaling (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 5 (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); extracellular exosome (ortholog) 2 201028829 201050661 + 22301074;30032202 116892907 MODEL JAAIVD010000001;XM_032894827;XM_032894828 XP_032750718;XP_032750719 RNA cytosine C(5)-methyltransferase NSUN2 protein-coding 625849957 LOC116887354 ubiquinol-cytochrome-c reductase complex assembly factor 2 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 7 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) 18 6675724 6687561 + 22301074;30032202 116887354 MODEL JAAIVD010000013;XM_032888948 XP_032744839 protein-coding 625849965 Paxx PAXX non-homologous end joining factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN Ku70:Ku80 complex (ortholog); nonhomologous end joining complex (ortholog); nucleoplasm (ortholog) 5 11721526 11723706 + 22301074;30032202 116901298 MODEL JAAIVD010000023;XM_032903096 XP_032758987 protein PAXX protein-coding 625849976 Nfil3 nuclear factor, interleukin 3 regulated ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); natural killer cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); inflammatory bowel disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 14 71275429 71288833 - 22301074;30032202 116883675 MODEL JAAIVD010000009;XM_032884883;XM_032884884;XM_032884885 XP_032740774;XP_032740775;XP_032740776 nuclear factor interleukin-3-regulated protein protein-coding 625849988 LOC116884636 60S ribosomal protein L32-like 15 43421403 43422698 + 116884636 MODEL JAAIVD010000010 pseudo 625849989 Ttc4 tetratricopeptide repeat domain 4 INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 48127644 48143803 + 22301074 116899379 MODEL JAAIVD010000025;XM_032901099 XP_032756990 tetratricopeptide repeat protein 4 protein-coding 625850003 LOC116893443 leukocyte immunoglobulin-like receptor subfamily B member 3 2 176772075 176774243 + 116893443 MODEL JAAIVD010000001;XM_032895210 XP_032751101 protein-coding 625850010 LOC116894663 trace amine-associated receptor 2 2 209997818 210001778 + 22301074;30032202 116894663 MODEL JAAIVD010000001;XM_032896366 XP_032752257 protein-coding 625850014 Eif5a eukaryotic translation initiation factor 5A ENCODES a protein that exhibits RNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); cellular response to virus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 49526286 49530815 - 22301074;30032202 116908506 MODEL JAAIVD010000002;XM_032911678;XM_032911679;XM_032911680 XP_032767569;XP_032767570;XP_032767571 eukaryotic translation initiation factor 5A-1 protein-coding 625850033 LOC116902531 U1 spliceosomal RNA 5 134810397 134810560 - 116902531 MODEL JAAIVD010000023;XR_004388135 snrna 625850036 LOC116904335 syntaxin-binding protein 3-like 6 67791673 67834406 - 116904335 MODEL JAAIVD010000024 pseudo 625850037 Akap11 A-kinase anchoring protein 11 ENCODES a protein that exhibits kinase regulator activity (ortholog); protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); intracellular protein localization (ortholog); positive regulation of establishment of endothelial barrier (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Mouth Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); peroxisome (ortholog) 12 45761415 45804472 + 30032202 116913910 MODEL JAAIVD010000007;XM_032918185;XM_032918187 XP_032774076;XP_032774078 A-kinase anchor protein 11 protein-coding 625850056 LOC116910311 ganglioside-induced differentiation-associated protein 1-like 9 50724049 50728307 - 116910311 MODEL JAAIVD010000002 pseudo 625850057 Muc7 mucin 7, secreted INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 11 1878321 1879285 + 116912641 MODEL JAAIVD010000006;XM_032916760 XP_032772651 mucin-7 protein-coding 625850060 LOC116885066 small nucleolar RNA SNORA17 15 45226782 45226913 - 116885066 MODEL JAAIVD010000010;XR_004385942 snorna 625850063 Znf274 zinc finger protein 274 ENCODES a protein that exhibits chromatin binding (ortholog); neurotrophin p75 receptor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); extrinsic apoptotic signaling pathway (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 174337546 174352493 - 30032202 116892616 MODEL JAAIVD010000001;XM_032894421;XM_032894422;XM_032894423 XP_032750312;XP_032750313;XP_032750314 neurotrophin receptor-interacting factor homolog protein-coding 625850081 LOC116912249 60S ribosomal protein L17-like 11 18884812 18885440 - 22301074;30032202 116912249 MODEL JAAIVD010000006;XM_032916232 XP_032772123 protein-coding 625850086 C2H2orf78 chromosome 2 C2orf78 homolog 2 156478038 156483402 + 116893342 MODEL JAAIVD010000001;XM_032895152 XP_032751043 uncharacterized protein C2orf78 homolog protein-coding 625850091 LOC116888945 ribosome biogenesis protein NSA2 homolog X 16955980 16956770 - 116888945 MODEL JAAIVD010000014 pseudo 625850092 LOC116907178 protein NDRG2-like 8 889449 890688 - 30032202 116907178 MODEL JAAIVD010000027;XM_032910137 XP_032766028 protein-coding 625850099 LOC116895875 uncharacterized LOC116895875 3 106045122 106114071 - 22301074;30032202 116895875 MODEL JAAIVD010000012;XM_032896972 XP_032752863 uncharacterized protein LOC116895875 protein-coding 625850127 LOC116898504 alpha-enolase-like 4 127875400 127993127 + 116898504 MODEL JAAIVD010000003 pseudo 625850128 Armh1 armadillo like helical domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 40828270 40852957 - 116887409 MODEL JAAIVD010000025;XM_032889013 XP_032744904 armadillo-like helical domain containing protein 1 protein-coding 625850143 LOC116889677 transcription elongation factor GreA-like 22301074;30032202 116889677 MODEL JAAIVD010000048;XM_032890567 XP_032746458 protein-coding 625850144 Pex5 peroxisomal biogenesis factor 5 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-1 binding (ortholog); peroxisome membrane targeting sequence binding (ortholog); INVOLVED IN cell development (ortholog); cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH Cerebrohepatorenal Syndrome, Variant Types (ortholog); Fanconi anemia complementation group D2 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 6 23380257 23405950 + 22301074;30032202 116903294 MODEL JAAIVD010000024;XM_032905715;XM_032905716;XM_032905717;XM_032905718 XP_032761606;XP_032761607;XP_032761608;XP_032761609 protein-coding 625850171 Gp9 glycoprotein IX platelet INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); Bernard-Soulier Syndrome, Type C (ortholog); genetic disease (ortholog); FOUND IN glycoprotein Ib-IX-V complex (ortholog) 6 58539507 58540850 - 22301074 116902735 MODEL JAAIVD010000024;XM_032905084 XP_032760975 platelet glycoprotein IX protein-coding 625850176 Galc galactosylceramidase ENCODES a protein that exhibits galactosylceramidase activity (ortholog); INVOLVED IN galactosylceramide catabolic process (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Creutzfeldt-Jakob disease (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog) 7 111371949 111428439 - 22301074;30032202 116905342 MODEL JAAIVD010000026;XM_032908240 XP_032764131 galactocerebrosidase protein-coding 625850197 Ppil1 peptidylprolyl isomerase like 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); protein peptidyl-prolyl isomerization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog); U2-type catalytic step 2 spliceosome (ortholog) 18 4610082 4625535 + 22301074;30032202 116887292 MODEL JAAIVD010000013;XM_032888873 XP_032744764 peptidyl-prolyl cis-trans isomerase-like 1 protein-coding 625850205 Pfkfb3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3 ENCODES a protein that exhibits 6-phosphofructo-2-kinase activity (ortholog); INVOLVED IN fructose 2,6-bisphosphate metabolic process (ortholog); PARTICIPATES IN glycolysis pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Arsenic Poisoning (ortholog); extrinsic cardiomyopathy (ortholog); FOUND IN 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex (ortholog); nucleoplasm (ortholog) 14 17505557 17535962 - 22301074;30032202 116883428 MODEL JAAIVD010000009;XM_032884558;XM_032884559;XM_032884561;XM_032884562;XM_032884563;XM_032884564 XP_032740449;XP_032740450;XP_032740452;XP_032740453;XP_032740454;XP_032740455 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 3 protein-coding 625850234 Tln2 talin 2 INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN fascia adherens (ortholog); presynapse (ortholog); synapse (ortholog) 8 61564959 61802014 - 22301074;30032202 116907982 MODEL JAAIVD010000027;XM_032911227 XP_032767118 talin-2 protein-coding 625850295 Bhlhe41 basic helix-loop-helix family member e41 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH esophageal cancer (ortholog); Familial Natural Short Sleep 1 (ortholog); lung adenocarcinoma (ortholog) 6 3593438 3597843 - 22301074;30032202 116903083 MODEL JAAIVD010000024;XM_032905404 XP_032761295 class E basic helix-loop-helix protein 41 protein-coding 625850304 Slc10a6 solute carrier family 10 member 6 ENCODES a protein that exhibits sodium-dependent organic anion transmembrane transporter activity (ortholog); INVOLVED IN sodium-dependent organic anion transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 11 13699875 13722570 - 22301074;30032202 116912446 MODEL JAAIVD010000006;XM_032916515 XP_032772406 protein-coding 625850313 LOC116902573 small nucleolar RNA SNORA17 5 93462222 93462353 + 116902573 MODEL JAAIVD010000023;XR_004388167 snorna 625850316 LOC116893216 cell division cycle-associated protein 4-like 2 114568805 114569658 - 116893216 MODEL JAAIVD010000001 pseudo 625850317 Tlk1 tousled like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); intracellular signal transduction (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Neoplasm Recurrence, Local (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 47992381 48112393 - 22301074;30032202 116901498 MODEL JAAIVD010000023;XM_032903465;XM_032903467;XM_032903468 XP_032759356;XP_032759358;XP_032759359 serine/threonine-protein kinase tousled-like 1 protein-coding 625850349 Fbxo33 F-box protein 33 7 72490009 72521554 - 22301074;30032202 116905085 MODEL JAAIVD010000026;XM_032907803 XP_032763694 F-box only protein 33 protein-coding 625850357 Lsm2 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); Lsm2-8 complex (ortholog) 18 7576883 7580842 + 22301074;30032202 116887181 MODEL JAAIVD010000013;XM_032888735;XM_032888736 XP_032744626;XP_032744627 U6 snRNA-associated Sm-like protein LSm2 protein-coding 625850369 LOC116893888 integrin alpha-D 2 73727822 73756019 - 22301074;30032202 116893888 MODEL JAAIVD010000001;XM_032895607 XP_032751498 protein-coding 625850402 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 154633133 154633205 + 116890637 MODEL JAAIVD010000025 trna 625850403 LOC116906183 cofilin-1-like 7 110743529 110744246 - 116906183 MODEL JAAIVD010000026 pseudo 625850404 LOC116912697 60S ribosomal protein L13a-like 11 19230056 19230702 - 116912697 MODEL JAAIVD010000006 pseudo 625850405 LOC116903291 uncharacterized LOC116903291 6 23275188 23278108 + 116903291 MODEL JAAIVD010000024;XR_004388270 ncrna 625850410 Aanat aralkylamine N-acetyltransferase ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); aralkylamine N-acetyltransferase activity (ortholog); arylamine N-acetyltransferase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); circadian rhythm (ortholog); melatonin biosynthetic process (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH advanced sleep phase syndrome (ortholog); delayed sleep phase syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 9 67472313 67476908 - 30032202 116909693 MODEL JAAIVD010000002;XM_032913356 XP_032769247 serotonin N-acetyltransferase protein-coding 625850418 LOC116913023 U2 spliceosomal RNA 11 7365323 7365515 - 116913023 MODEL JAAIVD010000006;XR_004389570 snrna 625850421 Atp5pf ATP synthase peripheral stalk subunit F6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); negative regulation of prostaglandin secretion (ortholog); positive regulation of blood pressure (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH essential hypertension (ortholog); Experimental Diabetes Mellitus (ortholog); heart disease (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); mitochondrion (ortholog) 4 57425849 57433595 + 22301074;30032202 116899036 MODEL JAAIVD010000003;XM_032900496;XM_032900497;XM_032900499;XM_032900500;XM_032900501 XP_032756387;XP_032756388;XP_032756390;XP_032756391;XP_032756392 ATP synthase-coupling factor 6, mitochondrial protein-coding 625850443 LOC116911546 60S ribosomal protein L21-like 10 64003240 64003746 + 22301074;30032202 116911546 MODEL JAAIVD010000005;XM_032915536 XP_032771427 protein-coding 625850447 LOC116907861 heat shock protein HSP 90-beta-like 8 77416933 77419105 + 116907861 MODEL JAAIVD010000027 pseudo 625850448 LOC116906776 olfactory receptor 7A17-like 1 156701179 156702138 - 22301074;30032202 116906776 MODEL JAAIVD010000025;XM_032909626 XP_032765517 protein-coding 625850451 LOC116887601 alpha/beta hydrolase domain-containing protein 17C-like 18 9360239 9360853 - 116887601 MODEL JAAIVD010000013 pseudo 625850452 Robo3 roundabout guidance receptor 3 INVOLVED IN axon guidance (ortholog); axon midline choice point recognition (ortholog); commissural neuron axon guidance (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Brain Injuries (ortholog); conjugate gaze palsy (ortholog); FOUND IN axon (ortholog) 8 33597691 33614297 - 22301074;30032202 116907752 MODEL JAAIVD010000027;XM_032910890 XP_032766781 roundabout homolog 3 protein-coding 625850484 LOC116909352 activated RNA polymerase II transcriptional coactivator p15-like 9 28760663 28761136 - 116909352 MODEL JAAIVD010000002 pseudo 625850485 LOC116902160 uncharacterized LOC116902160 5 133853239 133853837 + 116902160 MODEL JAAIVD010000023;XR_004388048 ncrna 625850489 LOC116894963 small nucleolar RNA SNORA3/SNORA45 family 2 91960983 91961113 - 116894963 MODEL JAAIVD010000001;XR_004387156 snorna 625850492 LOC116900673 cystatin-8 5 128330955 128337587 + 22301074;30032202 116900673 MODEL JAAIVD010000023;XM_032902377 XP_032758268 protein-coding 625850500 Cfl2 cofilin 2 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); actin filament organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); centronuclear myopathy (ortholog); genetic disease (ortholog); FOUND IN I band (ortholog); Z disc (ortholog) 7 68222476 68226535 - 22301074;30032202 116905052 MODEL JAAIVD010000026;XM_032907742;XM_032907743 XP_032763633;XP_032763634 cofilin-2 protein-coding 625850511 LOC116894365 sialic acid-binding Ig-like lectin 10 2 155973503 155984052 + 30032202 116894365 MODEL JAAIVD010000001;XM_032896069 XP_032751960 protein-coding 625850524 Lhfpl6 LHFPL tetraspan subfamily member 6 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 3 101191396 101388032 - 30032202 116896882 MODEL JAAIVD010000012;XM_032898427 XP_032754318 LHFPL tetraspan subfamily member 6 protein protein-coding 625850532 LOC116885290 2'-5'-oligoadenylate synthase 1A-like 16 32895134 32907774 + 30032202 116885290 MODEL JAAIVD010000004;XM_032886539 XP_032742430 protein-coding 625850542 LOC116912121 ribosome biogenesis protein NSA2 homolog 11 4864584 4865614 - 30032202 116912121 MODEL JAAIVD010000006;XM_032916031 XP_032771922 protein-coding 625850547 LOC116887028 uncharacterized LOC116887028 18 39474372 39535473 - 116887028 MODEL JAAIVD010000013;XR_004386197 ncrna 625850551 Cfap20dc CFAP20 domain containing 12 78849291 79089929 - 116913406 MODEL JAAIVD010000007;XM_032917591 XP_032773482 uncharacterized protein C3orf67 homolog protein-coding 625850571 LOC116884956 40S ribosomal protein S10-like 15 32945289 32945801 + 116884956 MODEL JAAIVD010000010 pseudo 625850572 LOC116912037 transmembrane protein 69-like 11 79568399 79569143 + 116912037 MODEL JAAIVD010000006 pseudo 625850573 Rgs10 regulator of G protein signaling 10 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); response to amphetamine (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); opioid abuse (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendritic spine (ortholog) 2 73533559 73575340 + 22301074;30032202 116891435 MODEL JAAIVD010000001;XM_032892496;XM_032892497 XP_032748387;XP_032748388 regulator of G-protein signaling 10 protein-coding 625850585 LOC116906980 olfactory receptor 150-like 8 82634773 82635744 + 22301074;30032202 116906980 MODEL JAAIVD010000027;XM_032909901 XP_032765792 protein-coding 625850589 LOC116884411 interferon-inducible GTPase 1-like 15 71489309 71493412 - 116884411 MODEL JAAIVD010000010 pseudo 625850590 Dars2 aspartyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aspartate-tRNA ligase activity (ortholog); aspartate-tRNA(Asn) ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial asparaginyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); clubfoot (ortholog); Gait Ataxia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 10 40329329 40358694 - 22301074;30032202 116911322 MODEL JAAIVD010000005;XM_032915240 XP_032771131 aspartate--tRNA ligase, mitochondrial protein-coding 625850611 LOC116905414 chromatin target of PRMT1 protein-like 7 120249495 120250299 + 116905414 MODEL JAAIVD010000026 pseudo 625850612 LOC116898108 cellular tumor antigen p53-like 4 98729960 98730738 + 116898108 MODEL JAAIVD010000003 pseudo 625850613 LOC116913017 small nucleolar RNA ACA64 11 81752538 81752676 - 116913017 MODEL JAAIVD010000006;XR_004389569 snorna 625850616 LOC116894568 glyceraldehyde-3-phosphate dehydrogenase-like 2 178755080 178756004 + 116894568 MODEL JAAIVD010000001 pseudo 625850617 Cul5 cullin 5 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cerebral cortex radially oriented cell migration (ortholog); cGAS/STING signaling pathway (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Brain Injuries (ortholog); Breast Neoplasms (ortholog); Hemorrhagic Shock (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 8 47605252 47655978 - 22301074;30032202 116908306 MODEL JAAIVD010000027;XM_032911583;XM_032911584 XP_032767474;XP_032767475 cullin-5 protein-coding 625850643 LOC116907163 olfactory receptor 7G2-like 8 14382122 14383060 + 22301074;30032202 116907163 MODEL JAAIVD010000027;XM_032910121 XP_032766012 protein-coding 625850646 Tsen2 tRNA splicing endonuclease subunit 2 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 31134195 31187664 - 22301074;30032202 116903382 MODEL JAAIVD010000024;XM_032905875;XM_032905876;XM_032905877 XP_032761766;XP_032761767;XP_032761768 tRNA-splicing endonuclease subunit Sen2 protein-coding 625850671 LOC116906139 40S ribosomal protein S7-like 7 91142638 91153428 + 116906139 MODEL JAAIVD010000026 pseudo 625850672 LOC116898034 triggering receptor expressed on myeloid cells 1-like 4 81686912 81702473 - 30032202 116898034 MODEL JAAIVD010000003;XM_032899424;XM_032899426 XP_032755315;XP_032755317 protein-coding 625850681 LOC116910883 regulating synaptic membrane exocytosis protein 2-like 1 212609129 212646304 - 30032202 116910883 MODEL JAAIVD010000025;XM_032914658 XP_032770549 protein-coding 625850689 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60893194 60893265 - 116897688 MODEL JAAIVD010000012 trna 625850690 Mbtps2 membrane bound transcription factor peptidase, site 2 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); transcription regulator activator activity (ortholog); INVOLVED IN bone maturation (ortholog); membrane protein intracellular domain proteolysis (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); ichthyosis follicularis-alopecia-photophobia syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog) X 35252114 35298749 - 22301074;30032202 116888387 MODEL JAAIVD010000014;XM_032889661 XP_032745552 membrane-bound transcription factor site-2 protease protein-coding 625850705 Dxo decapping exoribonuclease ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); magnesium ion binding (ortholog); mRNA 5'-diphosphatase activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); NAD-cap decapping (ortholog); nuclear mRNA surveillance (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 7429918 7432056 + 30032202 116887317 MODEL JAAIVD010000013;XM_032888906 XP_032744797 decapping and exoribonuclease protein protein-coding 625850716 Gnmt glycine N-methyltransferase ENCODES a protein that exhibits folic acid binding (ortholog); glycine binding (ortholog); glycine N-methyltransferase activity (ortholog); INVOLVED IN glycine metabolic process (ortholog); glycogen metabolic process (ortholog); methionine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH Chronic Hepatitis (ortholog); glycine N-methyltransferase deficiency (ortholog); hepatitis (ortholog); FOUND IN cytosol (ortholog); methyltransferase complex (ortholog) 4 83138621 83141693 + 22301074;30032202 116899096 MODEL JAAIVD010000003;XM_032900605 XP_032756496 protein-coding 625850726 Dusp23 dual specificity phosphatase 23 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); FOUND IN nucleoplasm (ortholog) 10 51745755 51747757 - 22301074;30032202 116911132 MODEL JAAIVD010000005;XM_032914979 XP_032770870 dual specificity protein phosphatase 23 protein-coding 625850732 LOC116899833 small nucleolar RNA SNORA48 4 87318763 87318899 + 116899833 MODEL JAAIVD010000003 pseudo 625850733 Tbc1d2b TBC1 domain family member 2B INVOLVED IN endocytosis (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with seizures and gingival overgrowth (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) 12 5419514 5488527 - 116913067 MODEL JAAIVD010000007;XM_032917194 XP_032773085 protein-coding 625850750 Hecw2 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 INVOLVED IN regulation of mitotic metaphase/anaphase transition (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN mitotic spindle (ortholog) 4 128531764 128906466 - 22301074;30032202 116899385 MODEL JAAIVD010000003;XM_032901104;XM_032901105;XM_032901106 XP_032756995;XP_032756996;XP_032756997 E3 ubiquitin-protein ligase HECW2 protein-coding 625850791 LOC116913205 uncharacterized LOC116913205 12 67814093 67827651 + 116913205 MODEL JAAIVD010000007;XM_032917389 XP_032773280 uncharacterized protein LOC116913205 protein-coding 625850799 LOC116914230 probable ATP-dependent RNA helicase DDX60 13 26946458 27106412 - 22301074;30032202 116914230 MODEL JAAIVD010000008;XM_032918425 XP_032774316 protein-coding 625850841 Btg4 BTG anti-proliferation factor 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 8 (ortholog) 8 45494222 45561559 + 30032202 116907401 MODEL JAAIVD010000027;XM_032910355 XP_032766246 protein BTG4 protein-coding 625850851 LOC116898389 G protein-coupled receptor kinase 6-like 4 74199127 74202202 + 116898389 MODEL JAAIVD010000003 pseudo 625850852 LOC116891672 uncharacterized LOC116891672 2 91708715 91716533 - 116891672 MODEL JAAIVD010000001;XR_004386858 ncrna 625850856 LOC116901477 uncharacterized LOC116901477 5 46419657 46420342 - 116901477 MODEL JAAIVD010000023;XR_004388000 ncrna 625850860 Ankrd63 ankyrin repeat domain 63 5 96856791 96857963 - 22301074 116901783 MODEL JAAIVD010000023;XM_032903927 XP_032759818 ankyrin repeat domain-containing protein 63 protein-coding 625850863 Tnfrsf8 TNF receptor superfamily member 8 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH AIDS-Related Opportunistic Infections (ortholog); anaplastic large cell lymphoma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 1 13514359 13558747 + 22301074 116886203 MODEL JAAIVD010000025;XM_032887593 XP_032743484 tumor necrosis factor receptor superfamily member 8 protein-coding 625850880 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56398180 56398251 + 116910807 MODEL JAAIVD010000002 trna 625850881 Bicdl1 BICD family like cargo adaptor 1 ENCODES a protein that exhibits dynactin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to secretory granule transport (ortholog); neuron projection development (ortholog); FOUND IN centrosome (ortholog) 16 38092125 38178154 + 30032202 116885760 MODEL JAAIVD010000004;XM_032887074;XM_032887075;XM_032887076;XM_032887077;XM_032887078;XR_004386041 XP_032742965;XP_032742966;XP_032742967;XP_032742968;XP_032742969 BICD family-like cargo adapter 1 protein-coding 625850907 Cchcr1 coiled-coil alpha-helical rod protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH alopecia areata (ortholog); amphetamine abuse (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 8725394 8738172 + 22301074;30032202 116887454 MODEL JAAIVD010000013;XM_032889062;XM_032889063 XP_032744953;XP_032744954 protein-coding 625850933 LOC116909261 olfactory receptor 1468-like 9 31725628 31726569 - 22301074;30032202 116909261 MODEL JAAIVD010000002;XM_032912784 XP_032768675 protein-coding 625850936 Ppp1r3b protein phosphatase 1 regulatory subunit 3B ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN negative regulation of glycogen catabolic process (ortholog); positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glycogen granule (ortholog); protein phosphatase type 1 complex (ortholog) 13 51660239 51671723 - 22301074;30032202 116914747 MODEL JAAIVD010000008;XM_032919193 XP_032775084 protein-coding 625850942 Tsnaxip1 translin associated factor X interacting protein 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) 17 25568138 25581074 + 30032202 116886505 MODEL JAAIVD010000011;XM_032888013 XP_032743904 translin-associated factor X-interacting protein 1 protein-coding 625850961 Rhob ras homolog family member B ENCODES a protein that exhibits GDP binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH Avian Sarcoma (ortholog); breast cancer (ortholog); cerebral palsy (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); early endosome (ortholog) 7 28824059 28826458 - 22301074;30032202 116906298 MODEL JAAIVD010000026;XM_032909192 XP_032765083 rho-related GTP-binding protein RhoB protein-coding 625850966 LOC116910375 40S ribosomal protein S6-like 9 82944893 82950237 + 116910375 MODEL JAAIVD010000002 pseudo 625850967 LOC116894718 60S ribosomal protein L7a-like 2 2984348 2994568 + 116894718 MODEL JAAIVD010000001 pseudo 625850968 LOC116893699 olfactory receptor 5B3-like 2 13133360 13134295 - 22301074;30032202 116893699 MODEL JAAIVD010000001;XM_032895416 XP_032751307 protein-coding 625850972 Mfn1 mitofusin 1 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH Acute Heart Injury (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog) 3 122420736 122465784 - 22301074;30032202 116896962 MODEL JAAIVD010000012;XM_032898540 XP_032754431 mitofusin-1 protein-coding 625850994 P2rx1 purinergic receptor P2X 1 ENCODES a protein that exhibits ATP binding (ortholog); extracellularly ATP-gated monoatomic cation channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of localization in cell (ortholog); insemination (ortholog); ASSOCIATED WITH toxic encephalopathy (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) 9 42495535 42511191 - 22301074;30032202 116909765 MODEL JAAIVD010000002;XM_032913453 XP_032769344 P2X purinoceptor 1 protein-coding 625851010 Lratd1 LRAT domain containing 1 INVOLVED IN cell morphogenesis (ortholog); cell motility (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 7 34095320 34099823 - 116904888 MODEL JAAIVD010000026;XM_032907489 XP_032763380 protein LRATD1 protein-coding 625851016 Hint2 histidine triad nucleotide binding protein 2 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); INVOLVED IN lipid catabolic process (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 2845392 2847810 + 30032202 116890963 MODEL JAAIVD010000025;XM_032891628 XP_032747519 histidine triad nucleotide-binding protein 2, mitochondrial protein-coding 625851025 Kcnh6 potassium voltage-gated channel subfamily H member 6 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH glucose metabolism disease (ortholog) 9 73078937 73101434 - 22301074;30032202 116910013 MODEL JAAIVD010000002;XM_032913800 XP_032769691 protein-coding 625851043 Ctxn1 cortexin 1 16 2390844 2392449 - 116885363 MODEL JAAIVD010000004;XM_032886636 XP_032742527 cortexin-1 protein-coding 625851049 LOC116903629 thyroid hormone receptor-associated protein 3-like 6 115173491 115177370 + 116903629 MODEL JAAIVD010000024 pseudo 625851050 Rps9 ribosomal protein S9 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Liver Failure (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 2 178292139 178295611 + 22301074;30032202 116892705 MODEL JAAIVD010000001;XM_032894571 XP_032750462 40S ribosomal protein S9 protein-coding 625851059 LOC116900187 xin actin-binding repeat-containing protein 2 5 44801292 44882591 + 22301074;30032202 116900187 MODEL JAAIVD010000023;XM_032901945;XM_032901946;XM_032901947 XP_032757836;XP_032757837;XP_032757838 protein-coding 625851078 LOC116897636 small nucleolar RNA U89 3 62362170 62362403 - 116897636 MODEL JAAIVD010000012;XR_004387615 snorna 625851081 Prpf6 pre-mRNA processing factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); RNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 60 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 158691168 158754943 + 22301074;30032202 116902452 MODEL JAAIVD010000023;XM_032905013 XP_032760904 pre-mRNA-processing factor 6 protein-coding 625851106 Ghitm growth hormone inducible transmembrane protein ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); inner mitochondrial membrane organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 13 15594004 15605219 - 30032202 116914388 MODEL JAAIVD010000008;XM_032918603;XM_032918605 XP_032774494;XP_032774496 growth hormone-inducible transmembrane protein protein-coding 625851124 Tmem215 transmembrane protein 215 INVOLVED IN angiogenesis (ortholog); negative regulation of retinal cell programmed cell death (ortholog); sprouting angiogenesis (ortholog) 1 117727874 117730738 - 116902643 MODEL JAAIVD010000025;XM_032905037 XP_032760928 protein-coding 625851130 Mtor mechanistic target of rapamycin kinase ENCODES a protein that exhibits identical protein binding (ortholog); inositol hexakisphosphate binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); antibacterial innate immune response (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-4 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); AIDS-Associated Nephropathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 1 12214101 12318272 - 22301074;30032202 116892792 MODEL JAAIVD010000025;XM_032894667 XP_032750558 serine/threonine-protein kinase mTOR protein-coding 625851191 LOC116904571 elongin-C-like 6 19032991 19033324 + 116904571 MODEL JAAIVD010000024 pseudo 625851192 LOC116883200 sperm motility kinase X-like 14 40764108 40782183 - 22301074;30032202 116883200 MODEL JAAIVD010000009;XM_032884228 XP_032740119 protein-coding 625851196 LOC116885386 cytochrome P450 3A2-like 16 7820585 7866316 - 22301074;30032202 116885386 MODEL JAAIVD010000004;XM_032886666 XP_032742557 protein-coding 625851211 LOC116910689 small Cajal body-specific RNA 16 9 67009484 67009667 - 116910689 MODEL JAAIVD010000002;XR_004389218 ncrna 625851214 LOC116899942 U2 spliceosomal RNA 4 182739802 182739952 - 116899942 MODEL JAAIVD010000003 pseudo 625851215 LOC116884019 glyceraldehyde-3-phosphate dehydrogenase 14 1303916 1304926 + 22301074;30032202 116884019 MODEL JAAIVD010000009;XM_032885257 XP_032741148 protein-coding 625851219 LOC116895842 uncharacterized LOC116895842 3 82948544 82957026 - 116895842 MODEL JAAIVD010000012;XM_032896956 XP_032752847 uncharacterized protein LOC116895842 protein-coding 625851226 LOC116893660 membrane-spanning 4-domains subfamily A member 4D-like 2 11297427 11328633 - 22301074;30032202 116893660 MODEL JAAIVD010000001;XM_032895378;XM_032895379 XP_032751269;XP_032751270 protein-coding 625851242 LOC116889313 melanoma-associated antigen 10-like X 121523663 121528727 + 30032202 116889313 MODEL JAAIVD010000014;XM_032890435 XP_032746326 protein-coding 625851250 LOC116885106 small nucleolar RNA SNORD58 15 56982057 56982121 - 116885106 MODEL JAAIVD010000010;XR_004385971 snorna 625851253 LOC116894951 small nucleolar RNA SNORA70 2 225892672 225892809 + 116894951 MODEL JAAIVD010000001;XR_004387147 snorna 625851256 Cdk19 cyclin dependent kinase 19 INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 87 (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 40134824 40275098 + 22301074;30032202 116886844 MODEL JAAIVD010000013;XM_032888295;XM_032888296;XM_032888297 XP_032744186;XP_032744187;XP_032744188 cyclin-dependent kinase 19 protein-coding 625851279 LOC116906029 40S ribosomal protein S15a-like 7 32672669 32706577 - 116906029 MODEL JAAIVD010000026 pseudo 625851280 Zbtb33 zinc finger and BTB domain containing 33 ENCODES a protein that exhibits methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 101521516 101528686 + 22301074;30032202 116888431 MODEL JAAIVD010000014;XM_032889707 XP_032745598 transcriptional regulator Kaiso protein-coding 625851286 Mettl22 methyltransferase 22, Kin17 lysine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN protein methylation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 13526183 13542792 - 30032202 116909682 MODEL JAAIVD010000002;XM_032913341 XP_032769232 methyltransferase like 22;methyltransferase-like protein 22 protein-coding 625851301 Slc24a2 solute carrier family 24 member 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 1 66791134 67016689 + 22301074;30032202 116900441 MODEL JAAIVD010000025;XM_032902185 XP_032758076 sodium/potassium/calcium exchanger 2 protein-coding 625851316 LOC116904664 U7 small nuclear RNA 6 79972440 79972503 + 116904664 MODEL JAAIVD010000024;XR_004388364 snrna 625851319 LOC116893406 uncharacterized LOC116893406 2 173301059 173307862 + 30032202 116893406 MODEL JAAIVD010000001;XM_032895191 XP_032751082 uncharacterized protein LOC116893406 protein-coding 625851324 LOC116906668 endothelial differentiation-related factor 1-like 8 23874310 23874893 - 116906668 MODEL JAAIVD010000027 pseudo 625851325 LOC116884369 ATP synthase F(0) complex subunit B1, mitochondrial-like 15 43846478 43847080 + 116884369 MODEL JAAIVD010000010 pseudo 625851326 LOC116889652 elongation factor P-like 22301074;30032202 116889652 MODEL JAAIVD010000045;XM_032890556 XP_032746447 protein-coding 625851327 Dusp3 dual specificity phosphatase 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); MAP kinase phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); dephosphorylation (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); cytosol (ortholog); immunological synapse (ortholog) 9 61263528 61275308 - 22301074;30032202 116909105 MODEL JAAIVD010000002;XM_032912580 XP_032768471 dual specificity protein phosphatase 3 protein-coding 625851335 LOC116886557 eukaryotic translation initiation factor 4E-like 17 43593929 43600414 + 116886557 MODEL JAAIVD010000011 pseudo 625851336 LOC116899620 UDP-glucuronosyltransferase 1-5 4 160208751 160210522 + 22301074 116899620 MODEL JAAIVD010000003;XM_032901582 XP_032757473 protein-coding 625851341 Slc32a1 solute carrier family 32 member 1 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:proton antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN beta-alanine transport (ortholog); gamma-aminobutyric acid import (ortholog); gamma-aminobutyric acid transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); Developmental and Epileptic Encephalopathy 114 (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); cell tip (ortholog); cone cell pedicle (ortholog) 5 137955482 137960126 + 30032202 116902239 MODEL JAAIVD010000023;XM_032904656 XP_032760547 vesicular inhibitory amino acid transporter protein-coding 625851347 LOC116911305 POU domain, class 5, transcription factor 1-like 10 20111506 20112563 + 116911305 MODEL JAAIVD010000005 pseudo 625851348 Klk8 kallikrein related peptidase 8 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN ERBB4 signaling pathway (ortholog); keratinocyte proliferation (ortholog); memory (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); serine protease inhibitor complex (ortholog) 2 155588055 155594955 - 22301074;30032202;9722524 116892226 MODEL AJ005641;JAAIVD010000001;XM_032893790;XM_032893792 CAA06643;XP_032749681;XP_032749683 bsp1 kallikrein-8;serine protease protein-coding 625851361 LOC116915038 uncharacterized LOC116915038 13 31546949 31548018 + 116915038 MODEL JAAIVD010000008;XR_004389791 ncrna 625851365 LOC116887408 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8432447 8507767 - 22301074;30032202 116887408 MODEL JAAIVD010000013;XM_032889005;XM_032889006;XM_032889007;XM_032889008;XM_032889009;XM_032889010;XM_032889011;XM_032889012;XM_032889014;XM_032889015;XM_032889016;XM_032889017 XP_032744896;XP_032744897;XP_032744898;XP_032744899;XP_032744900;XP_032744901;XP_032744902;XP_032744903;XP_032744905;XP_032744906;XP_032744907;XP_032744908 protein-coding 625851414 Necab1 N-terminal EF-hand calcium binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 128605680 128793707 + 22301074;30032202 116903208 MODEL JAAIVD010000025;XM_032905585 XP_032761476 N-terminal EF-hand calcium-binding protein 1 protein-coding 625851431 LOC116889879 olfactory receptor 9-like 1 156481844 156482780 + 22301074 116889879 MODEL JAAIVD010000025;XM_032890703 XP_032746594 protein-coding 625851434 LOC116902504 U6 spliceosomal RNA 5 158521467 158521567 - 116902504 MODEL JAAIVD010000023 pseudo 625851435 Rgs14 regulator of G protein signaling 14 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN cell division (ortholog); chromosome segregation (ortholog); learning (ortholog); ASSOCIATED WITH nephrolithiasis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) 14 73691654 73705350 + 22301074;30032202 116883331 MODEL JAAIVD010000009;XM_032884401;XM_032884402 XP_032740292;XP_032740293 regulator of G-protein signaling 14 protein-coding 625851458 LOC116893227 vomeronasal type-2 receptor 116-like 2 115252567 115255130 - 116893227 MODEL JAAIVD010000001 pseudo 625851459 LOC116912940 U7 small nuclear RNA 11 59597757 59597819 - 116912940 MODEL JAAIVD010000006;XR_004389508 snrna 625851462 LOC116897562 U1 spliceosomal RNA 3 107039028 107039201 + 116897562 MODEL JAAIVD010000012 pseudo 625851463 LOC116907911 3-ketoacyl-CoA thiolase A, peroxisomal-like 8 110576033 110584985 + 30032202 116907911 MODEL JAAIVD010000027;XM_032911111 XP_032767002 protein-coding 625851479 Cdk2 cyclin dependent kinase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); centriole replication (ortholog); DNA damage response (ortholog); PARTICIPATES IN G1/S transition pathway; interleukin-2 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Embryo Loss (ortholog); Endometrial Neoplasms (ortholog); FOUND IN Cajal body (ortholog); centrosome (ortholog); chromosome, telomeric region (ortholog) 1 156174352 156182293 - 22301074;30032202;7862443 116906352 Q63700 MODEL D28753;D28754;JAAIVD010000025;XM_032909214;XM_032909215;XM_032909216;XR_004388647 BAA05947;BAA05948;XP_032765105;XP_032765106;XP_032765107 cyclin dependent kinase 2-alpha;cyclin dependent kinase 2-beta;cyclin-dependent kinase 2 protein-coding 625851499 LOC116894780 proteasome subunit alpha type-3-like 2 2881625 2884068 - 116894780 MODEL JAAIVD010000001 pseudo 625851500 LOC116887630 olfactory receptor 14J1-like 18 10535136 10537816 - 22301074;30032202 116887630 MODEL JAAIVD010000013;XM_032889230 XP_032745121 protein-coding 625851505 LOC116913923 voltage-dependent anion-selective channel protein 1-like 12 30469686 30486559 + 116913923 MODEL JAAIVD010000007 pseudo 625851506 LOC116910314 transmembrane protein 92-like 9 50773983 50776712 + 30032202 116910314 MODEL JAAIVD010000002;XM_032914178 XP_032770069 protein-coding 625851515 Creb3 cAMP responsive element binding protein 3 ENCODES a protein that exhibits cAMP response element binding protein binding (ortholog); CCR1 chemokine receptor binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); induction of positive chemotaxis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 2930078 2934617 - 30032202 116891001 MODEL JAAIVD010000025;XM_032891683 XP_032747574 cyclic AMP-responsive element-binding protein 3 protein-coding 625851528 Tatdn1 TatD DNase domain containing 1 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 233428516 233459512 - 30032202 116911866 MODEL JAAIVD010000025;XM_032915806;XM_032915807;XM_032915808;XM_032915809 XP_032771697;XP_032771698;XP_032771699;XP_032771700 putative deoxyribonuclease TATDN1 protein-coding 625851553 LOC116900608 60S ribosomal protein L7-like 5 101248122 101248894 - 116900608 MODEL JAAIVD010000023 pseudo 625851554 Trim63 tripartite motif containing 63 ENCODES a protein that exhibits titin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle contraction (ortholog); myotube cell development (ortholog); ASSOCIATED WITH Atrophy (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN contractile muscle fiber (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 1 23916950 23931001 - 22301074 116886735 MODEL JAAIVD010000025;XM_032888229 XP_032744120 E3 ubiquitin-protein ligase TRIM63 protein-coding 625851567 LOC116894678 carcinoembryonic antigen-related cell adhesion molecule 5-like 2 210160774 210185260 + 30032202 116894678 MODEL JAAIVD010000001;XM_032896380;XM_032896381;XM_032896382 XP_032752271;XP_032752272;XP_032752273 protein-coding 625851580 LOC116885074 small nucleolar RNA U13 15 9043431 9043532 - 116885074 MODEL JAAIVD010000010;XR_004385948 snorna 625851583 Cd74 CD74 molecule ENCODES a protein that exhibits amyloid-beta binding (ortholog); CD4 receptor binding (ortholog); cytokine binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 15 71132199 71141584 - 22301074;2499873;30032202 116884619 MODEL JAAIVD010000010;X14254;XM_032885760 CAA32468;XP_032741651 HLA class II histocompatibility antigen gamma chain protein-coding 625851596 Dner delta/notch like EGF repeat containing ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN central nervous system development (ortholog); glial cell differentiation (ortholog); Notch receptor processing (ortholog); PARTICIPATES IN Notch signaling pathway; FOUND IN dendrite (ortholog); early endosome (ortholog); neuronal cell body (ortholog) 4 157122078 157401849 - 22301074;30032202 116899572 MODEL JAAIVD010000003;XM_032901487 XP_032757378 delta and Notch-like epidermal growth factor-related receptor protein-coding 625851613 Slc66a2 solute carrier family 66 member 2 15 51938982 51976311 - 30032202 116884551 MODEL JAAIVD010000010;XM_032885688;XM_032885689;XM_032885690;XM_032885691 XP_032741579;XP_032741580;XP_032741581;XP_032741582 protein-coding 625851631 Ttc32 tetratricopeptide repeat domain 32 7 29271196 29277991 + 22301074 116904865 MODEL JAAIVD010000026;XM_032907456 XP_032763347 tetratricopeptide repeat protein 32 protein-coding 625851638 Il34 interleukin 34 ENCODES a protein that exhibits identical protein binding (ortholog); macrophage colony-stimulating factor receptor binding (ortholog); INVOLVED IN interleukin-34-mediated signaling pathway (ortholog); microglial cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN extracellular space (ortholog) 17 30450781 30512906 - 22301074;30032202 116886065 MODEL JAAIVD010000011;XM_032887377 XP_032743268 interleukin-34 protein-coding 625851649 Jaml junction adhesion molecule like ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamma-delta T cell activation (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); monocyte extravasation (ortholog); FOUND IN bicellular tight junction (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 8 39614837 39642296 + 30032202 116906896 MODEL JAAIVD010000027;XM_032909807 XP_032765698 junctional adhesion molecule-like protein-coding 625851663 LOC116898500 60S ribosomal protein L22-like 1 1 40391792 40392239 + 22301074;30032202 116898500 MODEL JAAIVD010000025;XM_032899736 XP_032755627 protein-coding 625851667 LOC116894024 olfactory receptor 52Z1-like 2 101986104 101987069 - 22301074 116894024 MODEL JAAIVD010000001;XM_032895740 XP_032751631 protein-coding 625851670 Oit3 oncoprotein induced transcript 3 INVOLVED IN renal system process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog) 18 25270691 25291733 - 22301074 116887267 MODEL JAAIVD010000013;XM_032888834 XP_032744725 oncoprotein-induced transcript 3 protein protein-coding 625851683 LOC116904365 thioredoxin reductase-like selenoprotein T 6 83798354 83801903 - 116904365 MODEL JAAIVD010000024 pseudo 625851684 LOC116893198 olfactory receptor 472 2 105966277 105969026 + 22301074;30032202 116893198 MODEL JAAIVD010000001;XM_032895095 XP_032750986 protein-coding 625851688 Kcne3 potassium voltage-gated channel subfamily E regulatory subunit 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN intracellular chloride ion homeostasis (ortholog); negative regulation of delayed rectifier potassium channel activity (ortholog); negative regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 6 (ortholog); hypokalemic periodic paralysis (ortholog); FOUND IN basolateral part of cell (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 98474087 98480940 + 22301074;30032202 116891735 MODEL JAAIVD010000001;XM_032893036;XM_032893037;XM_032893038 XP_032748927;XP_032748928;XP_032748929 potassium voltage-gated channel subfamily E member 3 protein-coding 625851703 Meiob meiosis specific with OB-fold ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); fertilization (ortholog); ASSOCIATED WITH Premature Ovarian Failure 23 (ortholog); spermatogenic failure 22 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 2092785 2124500 + 30032202 116910142 MODEL JAAIVD010000002;XM_032913987 XP_032769878 meiosis-specific with OB domain-containing protein protein-coding 625851721 LOC116900368 olfactory receptor 10AG1-like 5 69427626 69428631 + 22301074 116900368 MODEL JAAIVD010000023;XM_032902117 XP_032758008 protein-coding 625851725 Ccl28 C-C motif chemokine ligand 28 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); bronchial disease (ortholog); FOUND IN extracellular space (ortholog); secretory granule (ortholog) 3 177247259 177268851 - 22301074;30032202 116897168 MODEL JAAIVD010000012;XM_032898845 XP_032754736 C-C motif chemokine 28 protein-coding 625851732 Aacs acetoacetyl-CoA synthetase ENCODES a protein that exhibits acetoacetate-CoA ligase activity (ortholog); short-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to cholesterol (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN ketone bodies metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog) 16 28396929 28439905 - 22301074;30032202 116885355 MODEL JAAIVD010000004;XM_032886629 XP_032742520 protein-coding 625851754 LOC116899017 keratin-associated protein 26-1-like 4 55211624 55212487 + 30032202 116899017 MODEL JAAIVD010000003;XM_032900465 XP_032756356 protein-coding 625851759 Plekha2 pleckstrin homology domain containing A2 ENCODES a protein that exhibits fibronectin binding (ortholog); laminin binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of cell-matrix adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); membrane (ortholog); protein-containing complex (ortholog) 13 61359058 61417776 + 30032202 116914745 MODEL JAAIVD010000008;XM_032919190;XM_032919191 XP_032775081;XP_032775082 pleckstrin homology domain-containing family A member 2 protein-coding 625851778 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31456446 31456517 + 116910791 MODEL JAAIVD010000002 trna 625851779 Smarca2 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 2 ENCODES a protein that exhibits chromatin binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN aortic smooth muscle cell differentiation (ortholog); hematopoietic stem cell homeostasis (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Arnold-Chiari Malformation (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); intermediate filament cytoskeleton (ortholog); nBAF complex (ortholog) 2 26661872 26810885 + 22301074;30032202 116891056 MODEL JAAIVD010000001;XM_032891750 XP_032747641 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2;probable global transcription activator SNF2L2 protein-coding 625851815 LOC116903821 C-type lectin domain family 2 member E-like 6 18615236 18619676 + 30032202 116903821 MODEL JAAIVD010000024;XM_032906534 XP_032762425 protein-coding 625851822 LOC116900594 cyclin-dependent kinases regulatory subunit 2-like 5 96198061 96198299 - 116900594 MODEL JAAIVD010000023 pseudo 625851823 LOC116895177 40S ribosomal protein S18-like 3 117922271 117922839 - 116895177 MODEL JAAIVD010000012 pseudo 625851824 LOC116908938 arachidonate 15-lipoxygenase 9 49963857 49972528 - 22301074;30032202 116908938 MODEL JAAIVD010000002;XM_032912396 XP_032768287 protein-coding 625851842 Sigirr single Ig and TIR domain containing INVOLVED IN acute-phase response (ortholog); negative regulation of chemokine production (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN membrane (ortholog) 2 8373230 8383172 + 22301074 116890886 MODEL JAAIVD010000001;XM_032891498;XM_032891499 XP_032747389;XP_032747390 single Ig IL-1-related receptor protein-coding 625851859 LOC116912698 vomeronasal type-2 receptor 116-like 11 19326032 19347635 - 116912698 MODEL JAAIVD010000006 pseudo 625851860 Fdft1 farnesyl-diphosphate farnesyltransferase 1 ENCODES a protein that exhibits squalene synthase [NAD(P)H] activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis abuse (ortholog); cataract (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 12 61199609 61225915 + 30032202 116913120 MODEL JAAIVD010000007;XM_032917277 XP_032773168 squalene synthase protein-coding 625851872 LOC116884114 U6 spliceosomal RNA 14 19699657 19699763 + 116884114 MODEL JAAIVD010000009;XR_004385845 snrna 625851875 LOC116902831 uncharacterized LOC116902831 6 88900247 88904118 - 116902831 MODEL JAAIVD010000024;XR_004388238 ncrna 625851879 LOC116897402 U6 spliceosomal RNA 3 196050125 196050231 - 116897402 MODEL JAAIVD010000012;XR_004387445 snrna 625851882 Cfap52 cilia and flagella associated protein 52 INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); gene expression (ortholog); ASSOCIATED WITH visceral heterotaxy 10 (ortholog); visceral heterotaxy 5 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) 9 47526612 47566753 - 22301074;30032202 116909964 MODEL JAAIVD010000002;XM_032913739 XP_032769630 cilia- and flagella-associated protein 52 protein-coding 625851900 LOC116883568 histone H2B type 1-C/E/F/G/I 14 42683415 42683931 + 22301074;30032202 116883568 MODEL JAAIVD010000009;XM_032884750 XP_032740641 protein-coding 625851905 Rab43 RAB43, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 6 58505851 58528707 + 22301074;30032202 116903536 MODEL JAAIVD010000024;XM_032906150 XP_032762041 ras-related protein Rab-43 protein-coding 625851912 LOC116885112 small Cajal body-specific RNA 18 15 57217713 57217791 + 116885112 MODEL JAAIVD010000010;XR_004385977 ncrna 625851915 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92762622 92762693 - 116904856 MODEL JAAIVD010000024 trna 625851916 LOC116890019 60S ribosomal protein L30-like 1 194825670 194826123 - 22301074;30032202 116890019 MODEL JAAIVD010000025;XM_032890800 XP_032746691 protein-coding 625851921 Atpaf1 ATP synthase mitochondrial F1 complex assembly factor 1 ENCODES a protein that exhibits protein-containing complex stabilizing activity (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 39473436 39494712 + 22301074;30032202 116898098 MODEL JAAIVD010000025;XM_032899486;XM_032899493 XP_032755377;XP_032755384 protein-coding 625851938 LOC116901467 sodium channel protein type 1 subunit alpha-like 5 43733024 43847508 - 22301074;30032202 116901467 MODEL JAAIVD010000023;XM_032903418 XP_032759309 protein-coding 625851969 Grwd1 glutamate rich WD repeat containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA replication origin binding (ortholog); histone binding (ortholog); INVOLVED IN DNA replication (ortholog); nucleosome assembly (ortholog); nucleosome disassembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congenital diarrhea (ortholog); congenital diarrhea 14 (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 153685992 153691619 + 22301074 116892122 MODEL JAAIVD010000001;XM_032893605 XP_032749496 glutamate-rich WD repeat-containing protein 1 protein-coding 625851980 LOC116896241 cytochrome P450 2U1 ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); INVOLVED IN omega-hydroxylase P450 pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog) 3 27569225 27583615 + 22301074;30032202 116896241 MODEL JAAIVD010000012;XM_032897308;XR_004387318 XP_032753199 protein-coding 625851992 LOC116913541 pyruvate kinase PKM-like 12 36390943 36392521 - 22301074;30032202 116913541 MODEL JAAIVD010000007;XM_032917741 XP_032773632 protein-coding 625851995 LOC116887592 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 8685452 8688993 + 116887592 MODEL JAAIVD010000013 pseudo 625851996 LOC116913710 olfactory receptor 10G2 12 71484480 71485436 + 22301074 116913710 MODEL JAAIVD010000007;XM_032918007 XP_032773898 protein-coding 625851999 Bpifc BPI fold containing family C 1 162603809 162646614 + 22301074;30032202 116889969 MODEL JAAIVD010000025;XM_032890765 XP_032746656 BPI fold-containing family C protein protein-coding 625852017 Ect2l epithelial cell transforming 2 like 2 218689269 218761615 + 22301074 116893569 MODEL JAAIVD010000001;XM_032895276 XP_032751167 epithelial cell-transforming sequence 2 oncogene-like protein-coding 625852040 LOC116910981 kinesin-like protein KIF13A 10 94129063 94135079 + 116910981 MODEL JAAIVD010000005 pseudo 625852041 LOC116892434 peptidyl-prolyl cis-trans isomerase A-like 1 62486062 62488232 - 116892434 MODEL JAAIVD010000025 pseudo 625852042 LOC116884262 rRNA-processing protein FCF1 homolog 15 44793033 44793609 - 116884262 MODEL JAAIVD010000010 pseudo 625852043 Arhgef11 Rho guanine nucleotide exchange factor 11 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of L-glutamate import across plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 65823685 65945132 - 22301074;30032202 116896720 MODEL JAAIVD010000012;XM_032898138 XP_032754029 protein-coding 625852090 Clcc1 chloride channel CLIC like 1 ENCODES a protein that exhibits chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa 32 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 49581171 49605528 - 30032202 116896355 MODEL JAAIVD010000012;XM_032897459;XM_032897460;XM_032897461;XM_032897462 XP_032753350;XP_032753351;XP_032753352;XP_032753353 chloride channel CLIC-like protein 1 protein-coding 625852116 LOC116884997 putative Polycomb group protein ASXL3 15 21341601 21390625 - 30032202 116884997 MODEL JAAIVD010000010;XM_032886224 XP_032742115 protein-coding 625852123 LOC116898258 60S ribosomal protein L39-like 4 160358453 160358608 - 116898258 MODEL JAAIVD010000003 pseudo 625852124 LOC116887046 60S ribosomal protein L21-like 1 35115894 35116396 + 116887046 MODEL JAAIVD010000025 pseudo 625852125 Slc17a4 solute carrier family 17 member 4 ENCODES a protein that exhibits thyroid hormone transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN sodium-dependent phosphate transport (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) 14 42894629 42916996 - 22301074;30032202 116883395 MODEL JAAIVD010000009;XM_032884519;XM_032884520;XM_032884521;XM_032884522 XP_032740410;XP_032740411;XP_032740412;XP_032740413 probable small intestine urate exporter protein-coding 625852149 LOC116894739 UPF0461 protein C5orf24 homolog 2 108228523 108234186 - 116894739 MODEL JAAIVD010000001 pseudo 625852150 LOC116904554 natural killer cells antigen CD94-like 6 17797746 17809161 + 30032202 116904554 MODEL JAAIVD010000024;XM_032907349 XP_032763240 protein-coding 625852160 Hps1 HPS1 biogenesis of lysosomal organelles complex 3 subunit 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); cell morphogenesis (ortholog); eye pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 2 41851657 41874732 - 22301074;30032202 116891191 MODEL JAAIVD010000001;XM_032892011 XP_032747902 Hermansky-Pudlak syndrome 1 protein protein-coding 625852182 Kremen2 kringle containing transmembrane protein 2 INVOLVED IN limb development (ortholog); negative regulation of ossification (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Ependymomas (ortholog) 9 1039720 1044135 - 22301074;30032202 116910224 MODEL JAAIVD010000002;XM_032914113;XM_032914114;XM_032914115 XP_032770004;XP_032770005;XP_032770006 kremen protein 2 protein-coding 625852202 Grik2 glutamate ionotropic receptor kainate type subunit 2 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); detection of cold stimulus involved in thermoception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 6 (ortholog); bipolar disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite cytoplasm (ortholog) 18 47719014 48377165 - 22301074;30032202 116887507 MODEL JAAIVD010000013;XM_032889127;XM_032889128;XM_032889129;XM_032889130;XM_032889131;XM_032889133 XP_032745018;XP_032745019;XP_032745020;XP_032745021;XP_032745022;XP_032745024 glutamate receptor ionotropic, kainate 2 protein-coding 625852248 LOC116887475 alpha-enolase-like 1 45278513 45280089 + 116887475 MODEL JAAIVD010000025 pseudo 625852249 LOC116912152 60S ribosomal protein L36-like 11 54075306 54075932 + 116912152 MODEL JAAIVD010000006 pseudo 625852250 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50220273 50220343 + 116911903 MODEL JAAIVD010000005 trna 625852251 LOC116895282 calmodulin-1-like 3 9978034 9978477 + 22301074;30032202 116895282 MODEL JAAIVD010000012;XM_032896597 XP_032752488 protein-coding 625852254 Il2 interleukin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cytokine activity (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN extracellular space (ortholog) 3 116891667 116896372 + 22301074 116895518 MODEL JAAIVD010000012;XM_032896763 XP_032752654 interleukin-2 protein-coding 625852262 LOC116908824 olfactory receptor 1L4-like 9 92839010 92839954 - 22301074;30032202 116908824 MODEL JAAIVD010000002;XM_032912245 XP_032768136 protein-coding 625852265 Fam53a family with sequence similarity 53 member A 11 71222766 71241237 + 30032202 116912385 MODEL JAAIVD010000006;XM_032916442;XM_032916443 XP_032772333;XP_032772334 protein FAM53A protein-coding 625852276 Lyar Ly1 antibody reactive ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN erythrocyte development (ortholog); negative regulation of innate immune response (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 66952543 66967611 - 30032202 116912562 MODEL JAAIVD010000006;XM_032916665 XP_032772556 cell growth-regulating nucleolar protein protein-coding 625852289 Trio trio Rho guanine nucleotide exchange factor ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of fat cell differentiation (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynaptic active zone (ortholog) 3 152719261 153009831 + 22301074;30032202 116897057 MODEL JAAIVD010000012;XM_032898677 XP_032754568 triple functional domain protein protein-coding 625852350 Apbb3 amyloid beta precursor protein binding family B member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of cell cycle phase transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of protein secretion (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) 15 7708440 7715582 + 30032202 116884343 MODEL JAAIVD010000010;XM_032885475 XP_032741366 amyloid-beta A4 precursor protein-binding family B member 3 protein-coding 625852367 LOC116889897 olfactory receptor 2AP1-like 1 159990403 159991341 + 22301074;30032202 116889897 MODEL JAAIVD010000025;XM_032890720 XP_032746611 protein-coding 625852370 LOC116887935 interferon alpha-1-like 1 65142304 65142852 + 22301074;30032202 116887935 MODEL JAAIVD010000025;XM_032889397 XP_032745288 protein-coding 625852373 LOC116889993 glyceraldehyde-3-phosphate dehydrogenase-like 1 175895929 175896912 - 116889993 MODEL JAAIVD010000025 pseudo 625852374 LOC116889798 galectin-1 22301074;30032202 116889798 MODEL JAAIVD010000604;XM_032890647 XP_032746538 protein-coding 625852375 Smurf1 SMAD specific E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits activin receptor binding (ortholog); I-SMAD binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN autophagy (ortholog); BMP signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Spinal Cord Injuries (ortholog); withdrawal disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 16 8230555 8321137 + 22301074;30032202 116885183 MODEL JAAIVD010000004;XM_032886398 XP_032742289 E3 ubiquitin-protein ligase SMURF1 protein-coding 625852398 Gata3 GATA binding protein 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 15891615 15911548 - 22301074;30032202 116883888 MODEL JAAIVD010000009;XM_032885155;XM_032885156;XM_032885157;XM_032885158 XP_032741046;XP_032741047;XP_032741048;XP_032741049 trans-acting T-cell-specific transcription factor GATA-3 protein-coding 625852413 Lta4h leukotriene A4 hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); epoxide hydrolase activity (ortholog); leukotriene-A4 hydrolase activity (ortholog); INVOLVED IN leukotriene biosynthetic process (ortholog); leukotriene metabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 172502063 172533672 + 22301074;30032202 116908233 MODEL JAAIVD010000025;XM_032911498;XM_032911500 XP_032767389;XP_032767391 leukotriene A-4 hydrolase protein-coding 625852440 LOC116912653 protein Shroom3-like 11 5501427 5597706 + 30032202 116912653 MODEL JAAIVD010000006;XM_032916773 XP_032772664 protein-coding 625852446 LOC116889498 small nucleolar RNA SNORA48 X 50228155 50228299 + 116889498 MODEL JAAIVD010000014;XR_004386446 snorna 625852449 Mmp28 matrix metallopeptidase 28 INVOLVED IN negative regulation of macrophage chemotaxis (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); FOUND IN cytoplasm (ortholog) 9 87221250 87242281 + 22301074;30032202 116909593 MODEL JAAIVD010000002;XM_032913216 XP_032769107 matrix metalloproteinase-28 protein-coding 625852461 LOC116893415 vomeronasal type-2 receptor 26-like 2 174453066 174461586 + 22301074;30032202 116893415 MODEL JAAIVD010000001;XM_032895197 XP_032751088 protein-coding 625852466 Adrb3 adrenoceptor beta 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); beta-adrenergic receptor activity (ortholog); beta3-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Alzheimer's disease (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN membrane (ortholog); receptor complex (ortholog) 13 59302722 59305461 + 22301074;30032202 116914760 MODEL JAAIVD010000008;XM_032919211 XP_032775102 beta-3 adrenergic receptor protein-coding 625852473 Tmem167b transmembrane protein 167B INVOLVED IN constitutive secretory pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 3 49700260 49706161 + 116896357 MODEL JAAIVD010000012;XM_032897464 XP_032753355 protein kish-B protein-coding 625852480 LOC116888327 melanoma-associated antigen B5-like X 50018681 50019781 + 30032202 116888327 MODEL JAAIVD010000014;XM_032889599 XP_032745490 protein-coding 625852483 LOC116902492 U6 spliceosomal RNA 5 112416299 112416406 + 116902492 MODEL JAAIVD010000023;XR_004388107 snrna 625852486 Sdc4 syndecan 4 ENCODES a protein that exhibits fibronectin binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN inner ear receptor cell stereocilium organization (ortholog); negative regulation of T cell proliferation (ortholog); neural tube closure (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bacterial infectious disease (ortholog); COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cell surface (ortholog); costamere (ortholog); focal adhesion (ortholog) 5 153522211 153539195 + 30032202 116902362 MODEL JAAIVD010000023;XM_032904856 XP_032760747 syndecan-4 protein-coding 625852495 LOC116905161 60S ribosomal protein L26-like 7 87571241 87620157 - 22301074;30032202 116905161 MODEL JAAIVD010000026;XM_032907935 XP_032763826 protein-coding 625852500 Mob3c MOB kinase activator 3C 1 39513101 39516786 + 30032202 116898141 MODEL JAAIVD010000025;XM_032899521 XP_032755412 protein-coding 625852507 Arhgef26 Rho guanine nucleotide exchange factor 26 INVOLVED IN endothelial cell morphogenesis (ortholog); ruffle assembly (ortholog) 3 92752686 92862117 - 22301074;30032202 116896831 MODEL JAAIVD010000012;XM_032898313 XP_032754204 protein-coding 625852525 LOC116911883 U6 spliceosomal RNA 10 59496646 59496751 + 116911883 MODEL JAAIVD010000005;XR_004389397 snrna 625852528 LOC116911124 potassium channel subfamily T member 2-like 10 20474761 20505499 + 116911124 MODEL JAAIVD010000005;XM_032914971 XP_032770862 protein-coding 625852537 Luzp2 leucine zipper protein 2 2 144807512 145179767 - 116892059 MODEL JAAIVD010000001;XM_032893527 XP_032749418 protein-coding 625852553 LOC116893194 olfactory receptor 6-like 2 105113194 105114075 - 116893194 MODEL JAAIVD010000001 pseudo 625852554 Hcn3 hyperpolarization activated cyclic nucleotide gated potassium channel 3 ENCODES a protein that exhibits intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to dopamine (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Dental Pulp Exposure (ortholog); Experimental Diabetes Mellitus (ortholog); Parkinson's disease (ortholog); FOUND IN axon (ortholog); cone cell pedicle (ortholog); dendrite (ortholog) 3 64515988 64529912 + 22301074 116896666 MODEL JAAIVD010000012;XM_032898025 XP_032753916 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3 protein-coding 625852565 LOC116906523 U6 spliceosomal RNA 7 55354378 55354484 - 116906523 MODEL JAAIVD010000026;XR_004388745 snrna 625852568 LOC116896381 60S ribosomal protein L36-like 1 28763404 28764709 - 22301074;30032202 116896381 MODEL JAAIVD010000025;XM_032897912 XP_032753803 protein-coding 625852573 Ddhd2 DDHD domain containing 2 ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog); INVOLVED IN lipid droplet organization (ortholog); locomotory behavior (ortholog); positive regulation of mitochondrial fission (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 54 (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); membrane (ortholog) 13 60744087 60773449 + 22301074;30032202 116915114 MODEL JAAIVD010000008;XM_032919548;XM_032919549;XR_004389799 XP_032775439;XP_032775440 phospholipase DDHD2 protein-coding 625852602 LOC116897951 olfactory receptor 187-like 4 43122812 43123747 + 22301074;30032202 116897951 MODEL JAAIVD010000003;XM_032899350 XP_032755241 protein-coding 625852606 LOC116914020 uncharacterized LOC116914020 12 62745017 62768384 - 116914020 MODEL JAAIVD010000007;XR_004389657 ncrna 625852611 Praf2 PRA1 domain family member 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) X 14400017 14402635 - 30032202 116888610 MODEL JAAIVD010000014;XM_032889909 XP_032745800 PRA1 family protein 2 protein-coding 625852618 LOC116897341 uncharacterized protein KIAA0825 homolog 3 215765497 215785527 + 116897341 MODEL JAAIVD010000012;XM_032899098;XM_032899099 XP_032754989;XP_032754990 protein-coding 625852628 LOC116890369 U6 spliceosomal RNA 1 144770212 144770312 - 116890369 MODEL JAAIVD010000025 pseudo 625852629 LOC116908415 small nucleolar RNA SNORA17 8 59188578 59188705 - 116908415 MODEL JAAIVD010000027;XR_004388954 snorna 625852632 Fam240a family with sequence similarity 240 member A 8 101492249 101494270 - 116907403 MODEL JAAIVD010000027;XM_032910357 XP_032766248 protein FAM240A protein-coding 625852638 LOC116891410 protein FAM24A 2 70502228 70511357 - 116891410 MODEL JAAIVD010000001;XM_032892437 XP_032748328 protein-coding 625852647 LOC116883499 uncharacterized LOC116883499 14 48081129 48108283 + 116883499 MODEL JAAIVD010000009;XR_004385766 ncrna 625852652 Dop1a DOP1 leucine zipper like protein A FOUND IN Golgi-associated vesicle (ortholog) 8 80497986 80599440 + 30032202 116906807 MODEL JAAIVD010000027;XM_032909682 XP_032765573 protein dopey-1 protein-coding 625852696 LOC116895837 heterogeneous nuclear ribonucleoprotein A1-like 3 80814719 80815689 - 116895837 MODEL JAAIVD010000012 pseudo 625852697 LOC116889346 ran guanine nucleotide release factor-like X 105253939 105254483 + 116889346 MODEL JAAIVD010000014 pseudo 625852698 Polr3e RNA polymerase III subunit E PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 2 80850711 80878877 - 22301074;30032202 116891576 MODEL JAAIVD010000001;XM_032892755;XM_032892756 XP_032748646;XP_032748647 DNA-directed RNA polymerase III subunit RPC5 protein-coding 625852725 LOC116889796 60S ribosomal protein L37a-like 116889796 MODEL JAAIVD010000499 pseudo 625852726 LOC116898494 small membrane A-kinase anchor protein-like 4 122298491 122319513 + 116898494 MODEL JAAIVD010000003 pseudo 625852727 Acsf2 acyl-CoA synthetase family member 2 ENCODES a protein that exhibits medium-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrion (ortholog) 9 50943078 50985279 + 30032202 116909283 MODEL JAAIVD010000002;XM_032912820 XP_032768711 medium-chain acyl-CoA ligase ACSF2, mitochondrial protein-coding 625852747 LOC116899904 U1 spliceosomal RNA 4 95524419 95524576 - 116899904 MODEL JAAIVD010000003;XR_004387876 snrna 625852750 Itgb6 integrin subunit beta 6 ENCODES a protein that exhibits integrin binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN bone development (ortholog); bronchiole development (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH amelogenesis imperfecta type 1H (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); focal adhesion (ortholog) 5 38244518 38319850 - 30032202 116901441 MODEL JAAIVD010000023;XM_032903369 XP_032759260 integrin beta-6 protein-coding 625852770 LOC116884491 ferritin light chain 1 1 269619556 269620461 + 22301074;30032202 116884491 MODEL JAAIVD010000025;XM_032885615 XP_032741506 protein-coding 625852775 Osr1 odd-skipped related transcription factor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); cell proliferation involved in kidney development (ortholog); cellular response to retinoic acid (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); nucleus (ortholog) 7 29802566 29809465 + 30032202 116905627 MODEL JAAIVD010000026;XM_032908608 XP_032764499 protein odd-skipped-related 1 protein-coding 625852782 LOC116907334 rho GTPase-activating protein 33-like 8 31816121 31820101 + 116907334 MODEL JAAIVD010000027 pseudo 625852783 LOC116896594 protein S100-A6 3 63002990 63004308 - 22301074;30032202 116896594 MODEL JAAIVD010000012;XM_032897835 XP_032753726 protein-coding 625852790 Slc4a8 solute carrier family 4 member 8 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN basolateral protein secretion (ortholog); bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH prediabetes syndrome (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) 1 262276861 262347742 - 22301074;30032202 116883889 MODEL JAAIVD010000025;XM_032885161;XM_032885164 XP_032741052;XP_032741055 electroneutral sodium bicarbonate exchanger 1 protein-coding 625852824 Afmid arylformamidase INVOLVED IN L-tryptophan catabolic process to kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; FOUND IN cytoplasm (ortholog) 9 66225041 66239986 - 22301074 116908868 MODEL JAAIVD010000002;XM_032912308;XM_032912309 XP_032768199;XP_032768200 kynurenine formamidase protein-coding 625852844 LOC116900674 cystatin-13 5 128357996 128364848 + 22301074 116900674 MODEL JAAIVD010000023;XM_032902379 XP_032758270 protein-coding 625852849 Rnf214 ring finger protein 214 8 40392307 40427147 - 30032202 116906702 MODEL JAAIVD010000027;XM_032909500;XM_032909501;XM_032909502;XM_032909503;XM_032909504;XM_032909505;XM_032909507 XP_032765391;XP_032765392;XP_032765393;XP_032765394;XP_032765395;XP_032765396;XP_032765398 protein-coding 625852882 LOC116897397 U6 spliceosomal RNA 3 45305695 45305801 - 116897397 MODEL JAAIVD010000012;XR_004387441 snrna 625852885 LOC116913209 transcription factor BTF3-like 12 68163909 68165619 + 116913209 MODEL JAAIVD010000007 pseudo 625852886 Cracr2b calcium release activated channel regulator 2B INVOLVED IN store-operated calcium entry (ortholog) 2 8021407 8026787 - 22301074 116890864 MODEL JAAIVD010000001;XM_032891432;XM_032891433;XM_032891434 XP_032747323;XP_032747324;XP_032747325 EF-hand calcium-binding domain-containing protein 4A protein-coding 625852906 Casp2 caspase 2 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to mechanical stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Autosomal Recessive Intellectual Developmental Disorder 80 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endopeptidase complex (ortholog); nucleus (ortholog) 6 97937054 97954856 - 22301074;30032202 116903899 MODEL JAAIVD010000024;XM_032906667;XM_032906668 XP_032762558;XP_032762559 caspase-2 protein-coding 625852923 LOC116888232 aristaless homeobox protein-like X 101448081 101455506 - 30032202 116888232 MODEL JAAIVD010000014;XM_032889518 XP_032745409 protein-coding 625852931 Rapsn receptor associated protein of the synapse ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of protein localization to postsynaptic membrane (ortholog); neuromuscular junction development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autoimmune disease (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 11 (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 5 65205561 65215071 + 22301074 116900336 MODEL JAAIVD010000023;XM_032902090 XP_032757981 43 kDa receptor-associated protein of the synapse protein-coding 625852943 LOC116893974 40S ribosomal protein S29-like 2 100554910 100555088 - 116893974 MODEL JAAIVD010000001 pseudo 625852944 LOC116913739 mast cell protease 2-like 12 68981895 68983978 - 116913739 MODEL JAAIVD010000007 pseudo 625852945 LOC116908165 uncharacterized LOC116908165 8 40816979 40828351 - 116908165 MODEL JAAIVD010000027;XM_032911463 XP_032767354 uncharacterized protein LOC116908165 protein-coding 625852958 Ambn ameloblastin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 1F (ortholog) 11 1952005 1964959 + 22301074;30032202 116912607 MODEL JAAIVD010000006;XM_032916731;XM_032916732 XP_032772622;XP_032772623 protein-coding 625852977 Mgat5b alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B ENCODES a protein that exhibits alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) 9 67099441 67165051 - 22301074;30032202 116909476 MODEL JAAIVD010000002;XM_032913070 XP_032768961 protein-coding 625852999 LOC116896011 septin-7-like 3 175465001 175466431 + 116896011 MODEL JAAIVD010000012 pseudo 625853000 C3H1orf52 chromosome 3 C1orf52 homolog FOUND IN nucleoplasm (ortholog) 3 14946789 14953463 - 116896177 MODEL JAAIVD010000012;XM_032897215 XP_032753106 UPF0690 protein C1orf52 homolog protein-coding 625853007 Tacstd2 tumor associated calcium signal transducer 2 INVOLVED IN negative regulation of branching involved in ureteric bud morphogenesis (ortholog); negative regulation of cell motility (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); gelatinous drop-like corneal dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); extracellular space (ortholog); lateral plasma membrane (ortholog) 6 77089669 77091375 - 30032202 116902787 MODEL JAAIVD010000024;XM_032905125 XP_032761016 tumor-associated calcium signal transducer 2 protein-coding 625853012 LOC116888056 chromobox protein homolog 1-like X 87807121 87811157 - 116888056 MODEL JAAIVD010000014 pseudo 625853013 LOC116909684 tryptase 9 2609522 2611930 - 22301074 116909684 MODEL JAAIVD010000002;XM_032913343;XM_032913344 XP_032769234;XP_032769235 protein-coding 625853027 Erbb3 erb-b2 receptor tyrosine kinase 3 ENCODES a protein that exhibits ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); amblyopia (ortholog); Breast Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 1 156035846 156057450 - 22301074;30032202 116906256 MODEL JAAIVD010000025;XM_032909155 XP_032765046 receptor tyrosine-protein kinase erbB-3 protein-coding 625853059 Gpcpd1 glycerophosphocholine phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); INVOLVED IN skeletal muscle tissue development (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog) 5 112238572 112283213 - 22301074;30032202 116902003 MODEL JAAIVD010000023;XM_032904267;XM_032904268;XM_032904269 XP_032760158;XP_032760159;XP_032760160 glycerophosphocholine phosphodiesterase GPCPD1 protein-coding 625853088 LOC116914108 small nucleolar RNA SNORA19 12 12820645 12820773 - 116914108 MODEL JAAIVD010000007;XR_004389674 snorna 625853091 LOC116888257 surfeit locus protein 6-like X 10068240 10069300 - 116888257 MODEL JAAIVD010000014 pseudo 625853092 LOC116913963 60S ribosomal protein L21-like 12 46528835 46529355 - 116913963 MODEL JAAIVD010000007 pseudo 625853093 Elovl6 ELOVL fatty acid elongase 6 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); obesity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fatty acid elongase complex (ortholog) 3 29671927 29783252 - 22301074;30032202 116896267 MODEL JAAIVD010000012;XM_032897344 XP_032753235 elongation of very long chain fatty acids protein 6 protein-coding 625853102 LOC116909073 heterogeneous nuclear ribonucleoprotein A3-like 1 193585630 193587155 - 116909073 MODEL JAAIVD010000025 pseudo 625853103 LOC116900612 mortality factor 4-like protein 1 5 104608945 104609979 + 116900612 MODEL JAAIVD010000023;XR_004387938 pseudo 625853106 LOC116896039 trifunctional nucleotide phosphoesterase protein YfkN-like 3 192224450 192289749 - 116896039 MODEL JAAIVD010000012 pseudo 625853107 Pcare photoreceptor cilium actin regulator INVOLVED IN photoreceptor cell outer segment organization (ortholog); protein localization to photoreceptor outer segment (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cilium (ortholog); cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog) 7 21462560 21470976 + 30032202 116905643 MODEL JAAIVD010000026;XM_032908619 XP_032764510 protein-coding 625853112 Thap7 THAP domain containing 7 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); general transcription initiation factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) 4 2779467 2782505 - 30032202 116898642 MODEL JAAIVD010000003;XM_032899868;XM_032899869 XP_032755759;XP_032755760 THAP domain-containing protein 7 protein-coding 625853122 LOC116911192 nuclear receptor corepressor 1-like 10 8018557 8020096 - 30032202 116911192 MODEL JAAIVD010000005;XM_032915062 XP_032770953 protein-coding 625853129 Fosb FosB proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to calcium ion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 171311080 171318457 + 22301074;30032202 116892537 MODEL JAAIVD010000001;XM_032894298;XM_032894299 XP_032750189;XP_032750190 protein fosB protein-coding 625853141 LOC116908934 keratin-associated protein 9-3-like 9 54413758 54414126 - 22301074 116908934 MODEL JAAIVD010000002;XM_032912391 XP_032768282 protein-coding 625853144 Dusp1 dual specificity phosphatase 1 ENCODES a protein that exhibits growth factor binding (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to hormone stimulus (ortholog); ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Amyloid Neuropathies (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 4946337 4949155 + 22301074;30032202 116909607 MODEL JAAIVD010000002;XM_032913229 XP_032769120 dual specificity protein phosphatase 1 protein-coding 625853152 Jun Jun proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon regeneration (ortholog); cellular response to anisomycin (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcohol-Related Disorders (ortholog); angiosarcoma (ortholog); Asphyxia (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 1 58027600 58030788 - 30032202 116900104 MODEL JAAIVD010000025;XM_032901885 XP_032757776 transcription factor AP-1 protein-coding 625853157 LOC116893348 keratin-associated protein 21-2 2 157308631 157309001 - 116893348 MODEL JAAIVD010000001;XM_032895156 XP_032751047 protein-coding 625853161 C8H21orf58 chromosome 8 C21orf58 homolog 8 106675907 106687501 - 116907299 MODEL JAAIVD010000027;XM_032910247 XP_032766138 uncharacterized protein C21orf58 homolog protein-coding 625853172 Iqsec1 IQ motif and Sec7 domain ArfGEF 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN dendritic spine development (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); intellectual developmental disorder with short stature and behavioral abnormalities (ortholog); Liver Metastasis (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 6 55939370 56256777 + 22301074;30032202 116903505 MODEL JAAIVD010000024;XM_032906103;XM_032906104;XM_032906105;XM_032906106;XM_032906107;XM_032906108 XP_032761994;XP_032761995;XP_032761996;XP_032761997;XP_032761998;XP_032761999 IQ motif and SEC7 domain-containing protein 1 protein-coding 625853211 LOC116914973 polyadenylate-binding protein-interacting protein 2-like 13 20106978 20108687 - 30032202 116914973 MODEL JAAIVD010000008;XM_032919380 XP_032775271 protein-coding 625853215 P2ry14 purinergic receptor P2Y14 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 3 95779623 95795507 + 22301074;30032202 116896840 MODEL JAAIVD010000012;XM_032898345 XP_032754236 P2Y purinoceptor 14 protein-coding 625853221 Arhgef37 Rho guanine nucleotide exchange factor 37 15 70408985 70455213 + 22301074 116884629 MODEL JAAIVD010000010;XM_032885770 XP_032741661 protein-coding 625853238 LOC116889513 U1 spliceosomal RNA X 34803634 34803740 + 116889513 MODEL JAAIVD010000014 pseudo 625853239 LOC116896071 voltage-dependent anion-selective channel protein 1-like 3 210351764 210352690 - 116896071 MODEL JAAIVD010000012 pseudo 625853240 Klhl13 kelch like family member 13 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of cytokinesis (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) X 99467684 99580480 - 30032202 116888666 MODEL JAAIVD010000014;XM_032889961;XM_032889962;XM_032889963;XM_032889964 XP_032745852;XP_032745853;XP_032745854;XP_032745855 kelch-like protein 13 protein-coding 625853260 LOC116883208 PDZ domain-containing protein 4-like 14 42170333 42175311 - 116883208 MODEL JAAIVD010000009 pseudo 625853261 LOC116895922 hornerin-like 3 121301401 121354906 - 22301074;30032202 116895922 MODEL JAAIVD010000012;XM_032896997 XP_032752888 protein-coding 625853272 Trappc4 trafficking protein particle complex subunit 4 INVOLVED IN autophagy (ortholog); dendrite development (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Epilepsy, Spasticity, and Brain Atrophy (ortholog); Neurodevelopmental Disorder with Progressive Microcephaly, Spasticity, and Brain Anomalies (ortholog); FOUND IN dendrite (ortholog); Golgi stack (ortholog); postsynaptic density membrane (ortholog) 8 38951190 38954420 - 22301074;30032202 116906583 MODEL JAAIVD010000027;XM_032909320;XM_032909321;XM_032909322 XP_032765211;XP_032765212;XP_032765213 trafficking protein particle complex 4 protein-coding 625853287 LOC116908463 U6 spliceosomal RNA 8 51594958 51595064 - 116908463 MODEL JAAIVD010000027;XR_004388981 snrna 625853290 Hsdl1 hydroxysteroid dehydrogenase like 1 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); mitochondrion (ortholog) 17 39206759 39222598 - 116886317 MODEL JAAIVD010000011;XM_032887759 XP_032743650 inactive hydroxysteroid dehydrogenase-like protein 1 protein-coding 625853299 Gng13 G protein subunit gamma 13 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); sensory perception of taste (ortholog); FOUND IN dendrite (ortholog); heterotrimeric G-protein complex (ortholog); synapse (ortholog) 9 2982589 2984547 + 30032202 116909887 MODEL JAAIVD010000002;XM_032913626;XM_032913627 XP_032769517;XP_032769518 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-13 protein-coding 625853309 Pla2g4c phospholipase A2 group IVC ENCODES a protein that exhibits calcium-independent phospholipase A2 activity (ortholog); O-acyltransferase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); lipid droplet formation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 173654632 173689152 - 30032202 116893411 MODEL JAAIVD010000001;XM_032895193 XP_032751084 cytosolic phospholipase A2 gamma protein-coding 625853327 LOC116904556 killer cell lectin-like receptor subfamily I member 2 6 17843819 17852397 + 30032202 116904556 MODEL JAAIVD010000024;XM_032907351 XP_032763242 protein-coding 625853336 LOC116897506 small nucleolar RNA SNORA44 3 181798500 181798604 + 116897506 MODEL JAAIVD010000012;XR_004387526 snorna 625853339 LOC116890115 uncharacterized LOC116890115 1 237055160 237118380 - 116890115 MODEL JAAIVD010000025;XR_004386529 ncrna 625853347 Mknk2 MAPK interacting serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); hemopoiesis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 1 154209863 154220813 + 22301074;30032202 116904951 MODEL JAAIVD010000025;XM_032907606 XP_032763497 MAP kinase-interacting serine/threonine-protein kinase 2 protein-coding 625853365 Tmem156 transmembrane protein 156 11 22071704 22100003 - 116912402 MODEL JAAIVD010000006;XM_032916461;XM_032916462 XP_032772352;XP_032772353 protein-coding 625853379 LOC116889025 rab proteins geranylgeranyltransferase component A 1-like X 70459226 70519352 + 22301074;30032202 116889025 MODEL JAAIVD010000014;XM_032890228 XP_032746119 protein-coding 625853387 Senp5 SUMO specific peptidase 5 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); FOUND IN postsynaptic cytosol (ortholog); presynaptic cytosol (ortholog) 4 16798672 16831091 - 30032202 116898763 MODEL JAAIVD010000003;XM_032900090;XM_032900091;XM_032900092 XP_032755981;XP_032755982;XP_032755983 sentrin-specific protease 5 protein-coding 625853406 LOC116889309 testin-like X 98701242 98714872 - 22301074 116889309 MODEL JAAIVD010000014;XM_032890429 XP_032746320 protein-coding 625853412 Gpc6 glypican 6 INVOLVED IN cell migration (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Congenital Limb Deformities (ortholog); Congenital Micromelic Dysplasia with Dislocation of Radius (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 12 7971376 8990482 - 22301074;30032202 116913395 MODEL JAAIVD010000007;XM_032917577;XM_032917578 XP_032773468;XP_032773469 glypican-6 protein-coding 625853427 LOC116913493 olfactory receptor 1537-like 12 159842 160889 - 22301074;30032202 116913493 MODEL JAAIVD010000007;XM_032917696 XP_032773587 protein-coding 625853431 Anxa5 annexin A5 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); P-type calcium transporter activity (ortholog); INVOLVED IN cellular response to gonadotropin-releasing hormone (ortholog); cellular response to lead ion (ortholog); negative regulation of blood coagulation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autoimmune disease of the nervous system (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); dendrite (ortholog) 3 117508000 117538898 + 22301074;30032202 116896930 MODEL JAAIVD010000012;XM_032898499 XP_032754390 protein-coding 625853448 LOC116886487 S-phase kinase-associated protein 1-like 17 33483948 33484999 - 116886487 MODEL JAAIVD010000011 pseudo 625853449 LOC116914832 uncharacterized LOC116914832 13 846377 853602 + 116914832 MODEL JAAIVD010000008;XR_004389775 ncrna 625853453 LOC116894326 gamma-aminobutyric acid receptor-associated protein-like 2 151547886 151548229 - 116894326 MODEL JAAIVD010000001 pseudo 625853454 LOC116895809 glyceraldehyde-3-phosphate dehydrogenase-like 3 68429052 68449014 + 116895809 MODEL JAAIVD010000012 pseudo 625853455 Cenpn centromere protein N FOUND IN inner kinetochore (ortholog); nucleoplasm (ortholog) 17 36554115 36576191 + 22301074 116886335 MODEL JAAIVD010000011;XM_032887789 XP_032743680 protein-coding 625853471 Dclre1a DNA cross-link repair 1A ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); beta-lactamase activity (ortholog); INVOLVED IN nucleotide-excision repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog) 2 59616555 59636268 + 30032202 116891332 MODEL JAAIVD010000001;XM_032892263 XP_032748154 DNA cross-link repair 1A protein protein-coding 625853485 Rsbn1l round spermatid basic protein 1 like ASSOCIATED WITH COVID-19 (ortholog) 6 150189268 150247339 - 30032202 116904167 MODEL JAAIVD010000024;XM_032907068;XM_032907069 XP_032762959;XP_032762960 lysine-specific demethylase RSBN1L protein-coding 625853501 Rassf6 Ras association domain family member 6 INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of apoptotic process (ortholog) 11 4037995 4068917 - 22301074;30032202 116912352 MODEL JAAIVD010000006;XM_032916406 XP_032772297 ras association domain-containing protein 6 protein-coding 625853516 LOC116887917 uncharacterized LOC116887917 X 56870354 56871540 - 116887917 MODEL JAAIVD010000014 pseudo 625853517 LOC116909715 transmembrane protein 134-like 9 5162516 5163101 - 116909715 MODEL JAAIVD010000002 pseudo 625853518 Zbtb49 zinc finger and BTB domain containing 49 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); transcription coactivator binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 11 66972040 66989407 + 22301074;30032202 116912403 MODEL JAAIVD010000006;XM_032916463 XP_032772354 zinc finger and BTB domain-containing protein 49 protein-coding 625853529 LOC116912580 actin, cytoplasmic 2-like 11 41323611 41324733 + 116912580 MODEL JAAIVD010000006 pseudo 625853530 LOC116885903 enoyl-CoA hydratase domain-containing protein 2, mitochondrial-like 16 16317733 16318431 + 116885903 MODEL JAAIVD010000004 pseudo 625853531 Acss2 acyl-CoA synthetase short chain family member 2 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); chromatin binding (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); lipid biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; Leigh disease pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); Inflammation (ortholog); lymphangioleiomyomatosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 134852118 134894795 + 30032202 116902178 MODEL JAAIVD010000023;XM_032904530;XM_032904532 XP_032760421;XP_032760423 acetyl-coenzyme A synthetase, cytoplasmic protein-coding 625853557 Bmx BMX non-receptor tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); signal transduction (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog); ruffle membrane (ortholog) X 24782440 24836964 - 22301074;30032202 116888544 MODEL JAAIVD010000014;XM_032889854 XP_032745745 cytoplasmic tyrosine-protein kinase BMX protein-coding 625853579 Tspan13 tetraspanin 13 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN regulation of calcium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 7 49274906 49302180 - 22301074;30032202 116904974 MODEL JAAIVD010000026;XM_032907655 XP_032763546 tetraspanin-13 protein-coding 625853589 Cdh3 cadherin 3 INVOLVED IN cell-cell adhesion (ortholog); hair cycle process (ortholog); keratinization (ortholog); ASSOCIATED WITH congenital hypotrichosis with juvenile macular dystrophy (ortholog); ectodermal dysplasia, ectrodactyly, and macular dystrophy syndrome (ortholog); exotropia (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) 17 26226310 26275076 + 22301074;30032202 116886523 MODEL JAAIVD010000011;XM_032888035 XP_032743926 cadherin-3 protein-coding 625853609 Tagln3 transgelin 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog); synapse (ortholog) 4 30433746 30447472 - 22301074 116898880 MODEL JAAIVD010000003;XM_032900252 XP_032756143 transgelin-3 protein-coding 625853618 LOC116904188 uncharacterized LOC116904188 6 152070746 152085920 + 116904188 MODEL JAAIVD010000024;XR_004388334 ncrna 625853623 Ctse cathepsin E ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); protein autoprocessing (ortholog); proteolysis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endosome (ortholog) 10 4162770 4185596 - 22301074;30032202;7574663 116911539 MODEL D45187;JAAIVD010000005;XM_032915527 BAA08128;XP_032771418 protein-coding 625853637 LOC116894854 U6 spliceosomal RNA 2 30347687 30347794 - 116894854 MODEL JAAIVD010000001;XR_004387069 snrna 625853640 Ppp2cb protein phosphatase 2 catalytic subunit beta ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN dopamine signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); protein phosphatase type 2A complex (ortholog) 13 53395935 53417240 - 2554256;30032202 116914483 MODEL JAAIVD010000008;X16044;XM_032918794 CAA34167;XP_032774685 serine/threonine-protein phosphatase 2A catalytic subunit beta isoform protein-coding 625853651 LOC116907336 olfactory receptor 7E24-like 8 15458259 15459213 + 116907336 MODEL JAAIVD010000027 pseudo 625853652 Rassf7 Ras association domain family member 7 FOUND IN centriolar satellite (ortholog) 2 8259572 8262371 - 22301074 116890882 MODEL JAAIVD010000001;XM_032891486;XM_032891487 XP_032747377;XP_032747378 ras association domain-containing protein 7 protein-coding 625853665 Dnttip1 deoxynucleotidyltransferase terminal interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); nucleosome binding (ortholog); protein homodimerization activity (ortholog); FOUND IN chromosome (ortholog); histone deacetylase complex (ortholog); nucleolus (ortholog) 5 153189283 153212729 - 22301074;30032202 116902353 MODEL JAAIVD010000023;XM_032904839 XP_032760730 deoxynucleotidyltransferase terminal-interacting protein 1 protein-coding 625853682 LOC116895787 60S ribosomal protein L21-like 3 55535390 55535862 + 116895787 MODEL JAAIVD010000012 pseudo 625853683 Tmem67 transmembrane protein 67 ENCODES a protein that exhibits filamin binding (ortholog); misfolded protein binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autosomal recessive polycystic kidney disease (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary membrane (ortholog) 1 131445491 131499534 + 22301074;30032202 116903334 MODEL JAAIVD010000025;XM_032905782 XP_032761673 meckelin protein-coding 625853715 LOC116889275 protein tyrosine phosphatase type IVA 1-like X 103637529 103638061 - 22301074;30032202 116889275 MODEL JAAIVD010000014;XM_032890416;XM_032890417 XP_032746307;XP_032746308 protein-coding 625853723 LOC116888999 uncharacterized LOC116888999 X 88105763 88109964 - 116888999 MODEL JAAIVD010000014;XR_004386359 ncrna 625853727 LOC116887698 uncharacterized LOC116887698 18 13054824 13441604 - 116887698 MODEL JAAIVD010000013;XR_004386232 ncrna 625853732 Hddc2 HD domain containing 2 2 205404848 205425481 + 30032202 116892930 MODEL JAAIVD010000001;XM_032894866 XP_032750757 HD domain-containing protein 2 protein-coding 625853742 Mgam maltase-glucoamylase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); amylase activity (ortholog); INVOLVED IN dextrin catabolic process (ortholog); maltose catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; FOUND IN apical plasma membrane (ortholog) 6 41451559 41595343 + 22301074;30032202 116903448 MODEL JAAIVD010000024;XM_032906004 XP_032761895 maltase-glucoamylase, intestinal protein-coding 625853840 LOC116909851 cytochrome b-245 chaperone 1 INVOLVED IN innate immune response (ortholog); respiratory burst after phagocytosis (ortholog); ASSOCIATED WITH autosomal recessive chronic granulomatous disease 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 62795198 62802115 + 116909851 MODEL JAAIVD010000002;XM_032913577 XP_032769468 protein-coding 625853851 LOC116894680 39S ribosomal protein L30, mitochondrial-like 2 210397826 210398359 + 22301074;30032202 116894680 MODEL JAAIVD010000001;XM_032896384 XP_032752275 protein-coding 625853855 LOC116892018 uncharacterized LOC116892018 2 137723396 137726464 + 116892018 MODEL JAAIVD010000001;XR_004386887;XR_004386888 ncrna 625853864 LOC116883311 spermatogenesis-associated protein 31D4-like 14 74620906 74624972 - 116883311 MODEL JAAIVD010000009;XM_032884364 XP_032740255 protein-coding 625853870 Dzank1 double zinc ribbon and ankyrin repeat domains 1 FOUND IN centrosome (ortholog) 5 124121779 124169742 - 22301074;30032202 116902046 MODEL JAAIVD010000023;XM_032904331 XP_032760222 double zinc ribbon and ankyrin repeat-containing protein 1 protein-coding 625853895 Sh2d4a SH2 domain containing 4A ENCODES a protein that exhibits phosphatase binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 13 21038619 21100994 - 30032202 116914667 MODEL JAAIVD010000008;XM_032919072 XP_032774963 SH2 domain-containing protein 4A protein-coding 625853908 Cep85l centrosomal protein 85L INVOLVED IN neuron migration (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); epilepsy (ortholog); FOUND IN pericentriolar material (ortholog) 18 30197065 30352800 - 30032202 116886846 MODEL JAAIVD010000013;XM_032888299 XP_032744190 centrosomal protein 85 like;centrosomal protein of 85 kDa-like protein-coding 625853925 Znf668 zinc finger protein 668 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Ependymomas (ortholog); Failure to Thrive (ortholog); microcephaly (ortholog) 2 74030152 74039491 + 30032202 116891452 MODEL JAAIVD010000001;XM_032892522;XM_032892523;XM_032892524;XM_032892525 XP_032748413;XP_032748414;XP_032748415;XP_032748416 protein-coding 625853941 Cxxc5 CXXC finger protein 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of generation of precursor metabolites and energy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 15 8517711 8548880 - 22301074;30032202 116884515 MODEL JAAIVD010000010;XM_032885644;XM_032885645;XM_032885646;XM_032885647 XP_032741535;XP_032741536;XP_032741537;XP_032741538 CXXC-type zinc finger protein 5 protein-coding 625853960 LOC116895478 ferritin light chain 1-like 3 94682307 94682856 - 116895478 MODEL JAAIVD010000012 pseudo 625853961 Angptl3 angiopoietin like 3 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); growth factor activity (ortholog); integrin binding (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); artery morphogenesis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypobetalipoproteinemia 2 (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular space (ortholog) 1 55476089 55484222 - 30032202 116899975 MODEL JAAIVD010000025;XM_032901796 XP_032757687 angiopoietin-related protein 3 protein-coding 625853972 Dgke diacylglycerol kinase epsilon ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 9 81736235 81756673 + 22301074;30032202 116910191 MODEL JAAIVD010000002;XM_032914054 XP_032769945 protein-coding 625853987 LOC116884471 multifunctional methyltransferase subunit TRM112-like protein 15 63021075 63021442 + 116884471 MODEL JAAIVD010000010 pseudo 625853988 Cul3 cullin 3 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; Wnt signaling, canonical pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant pseudohypoaldosteronism type 1 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 153303041 153377377 - 22301074;30032202 116899554 MODEL JAAIVD010000003;XM_032901449;XM_032901450;XM_032901451 XP_032757340;XP_032757341;XP_032757342 cullin-3 protein-coding 625854015 LOC116886547 C-terminal-binding protein 2-like 17 12564954 12566265 + 116886547 MODEL JAAIVD010000011 pseudo 625854016 LOC116908221 olfactory receptor 7G2-like 8 75765264 75766194 + 116908221 MODEL JAAIVD010000027 pseudo 625854017 Plppr3 phospholipid phosphatase related 3 1 154998152 155012709 + 30032202 116905562 MODEL JAAIVD010000025;XM_032908587;XM_032908589 XP_032764478;XP_032764480 phospholipid phosphatase-related protein type 3 protein-coding 625854035 Tmbim6 transmembrane BAX inhibitor motif containing 6 ENCODES a protein that exhibits endoribonuclease inhibitor activity (ortholog); enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); invasive ductal carcinoma (ortholog); prostate carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 272195086 272212542 + 30032202 116885140 MODEL JAAIVD010000025;XM_032886328;XM_032886337 XP_032742219;XP_032742228 bax inhibitor 1 protein-coding 625854052 LOC116907261 N-alpha-acetyltransferase 11-like 8 14435167 14435771 - 116907261 MODEL JAAIVD010000027 pseudo 625854053 LOC116887595 mucin-21-like 18 8838096 8851292 - 116887595 MODEL JAAIVD010000013;XM_032889217 XP_032745108 protein-coding 625854060 Gpr18 G protein-coupled receptor 18 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); CD8-positive, alpha-beta intraepithelial T cell differentiation (ortholog); CD8-positive, gamma-delta intraepithelial T cell differentiation (ortholog) 12 2980307 2984037 + 22301074;30032202 116914031 MODEL JAAIVD010000007;XM_032918300 XP_032774191 N-arachidonyl glycine receptor protein-coding 625854066 Fgb fibrinogen beta chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein-folding chaperone binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); carotid artery disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70469986 70477329 + 22301074;30032202 116896745 MODEL JAAIVD010000012;XM_032898184;XM_032898186;XM_032898187 XP_032754075;XP_032754077;XP_032754078 protein-coding 625854084 LOC116910920 olfactory receptor 6N1-like 10 52741271 52742321 + 116910920 MODEL JAAIVD010000005 pseudo 625854085 LOC116894428 keratin-associated protein 20-2-like 2 158868187 158868345 + 116894428 MODEL JAAIVD010000001;XM_032896133 XP_032752024 protein-coding 625854088 LOC116889503 small nucleolar RNA SNORA48 X 87397647 87397790 + 116889503 MODEL JAAIVD010000014;XR_004386449 snorna 625854091 LOC116902985 taste receptor type 2 member 41 6 97773965 97774891 - 22301074;30032202 116902985 MODEL JAAIVD010000024;XM_032905304 XP_032761195 protein-coding 625854094 Ctbp1 C-terminal binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); HYPOTONIA, ATAXIA, DEVELOPMENTAL DELAY, AND TOOTH ENAMEL DEFECT SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); GABA-ergic synapse (ortholog) 11 71565492 71593052 + 22301074 116912091 MODEL JAAIVD010000006;XM_032915977;XM_032915978;XM_032915979;XM_032915980;XM_032915981;XM_032915982 XP_032771868;XP_032771869;XP_032771870;XP_032771871;XP_032771872;XP_032771873 C-terminal-binding protein 1 protein-coding 625854122 LOC116898398 potassium channel subfamily K member 16-like 4 80008022 80011656 - 116898398 MODEL JAAIVD010000003 pseudo 625854123 LOC116887371 60S ribosomal protein L9-like 18 12548684 12549261 + 116887371 MODEL JAAIVD010000013 pseudo 625854124 Myoz2 myozenin 2 ENCODES a protein that exhibits actin binding (ortholog); telethonin binding (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); Z disc (ortholog) 3 36785360 36812528 + 22301074;30032202 116895333 MODEL JAAIVD010000012;XM_032896641 XP_032752532 myozenin-2 protein-coding 625854134 Trmt61a tRNA methyltransferase 61A ENCODES a protein that exhibits mRNA (adenine-N1-)-methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); FOUND IN tRNA (m1A) methyltransferase complex (ortholog) 7 129273599 129279753 + 22301074;30032202 116905496 MODEL JAAIVD010000026;XM_032908501 XP_032764392 tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A protein-coding 625854141 Cers4 ceramide synthase 4 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphingolipid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 16 2640315 2673277 + 22301074;30032202 116885189 MODEL JAAIVD010000004;XM_032886406 XP_032742297 protein-coding 625854157 LOC116913163 uncharacterized LOC116913163 12 47141672 47268598 - 116913163 MODEL JAAIVD010000007;XM_032917369 XP_032773260 uncharacterized protein LOC116913163 protein-coding 625854162 Ptrh1 peptidyl-tRNA hydrolase 1 homolog ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN rescue of stalled ribosome (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 5 2858813 2865811 - 22301074;30032202 116901134 MODEL JAAIVD010000023;XM_032902733;XM_032902735 XP_032758624;XP_032758626 probable peptidyl-tRNA hydrolase protein-coding 625854175 Tp53i11 tumor protein p53 inducible protein 11 5 67364975 67370560 + 116901649 MODEL JAAIVD010000023;XM_032903756;XM_032903757;XM_032903758 XP_032759647;XP_032759648;XP_032759649 tumor protein p53-inducible protein 11 protein-coding 625854193 LOC116906595 uncharacterized LOC116906595 8 63002204 63002548 + 116906595 MODEL JAAIVD010000027;XR_004388753 ncrna 625854197 Fndc1 fibronectin type III domain containing 1 INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); mitochondrial membrane (ortholog) 2 192027132 192090463 - 22301074 116892842 MODEL JAAIVD010000001;XM_032894731 XP_032750622 fibronectin type III domain-containing protein 1 protein-coding 625854221 Sergef secretion regulating guanine nucleotide exchange factor INVOLVED IN negative regulation of protein secretion (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 152732496 152929609 + 116892102 MODEL JAAIVD010000001;XM_032893580 XP_032749471 secretion-regulating guanine nucleotide exchange factor protein-coding 625854235 LOC116910297 pancreatic progenitor cell differentiation and proliferation factor-like 9 46875804 46876231 - 116910297 MODEL JAAIVD010000002 pseudo 625854236 Dsg1 desmoglein 1 ENCODES a protein that exhibits gamma-catenin binding (ortholog); INVOLVED IN maternal process involved in female pregnancy (ortholog); protein stabilization (ortholog); response to progesterone (ortholog); ASSOCIATED WITH allergic disease (ortholog); Chronic Periodontitis (ortholog); Congenital Erythroderma with Palmoplantar Keratoderma, Hypotrichosis, and Hyper-IgE (ortholog); FOUND IN apical plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 15 23246762 23276209 - 22301074;30032202 116884817 MODEL JAAIVD010000010;XM_032886045;XM_032886046;XM_032886048 XP_032741936;XP_032741937;XP_032741939 desmoglein-1 protein-coding 625854261 LOC116912707 uncharacterized LOC116912707 11 19782163 19847066 - 116912707 MODEL JAAIVD010000006 pseudo 625854262 B4gat1 beta-1,4-glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); protein glycosylation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); congenital muscular dystrophy-dystroglycanopathy type A13 (ortholog); FOUND IN Golgi apparatus (ortholog) 2 2612457 2615292 - 30032202 116890745 MODEL JAAIVD010000001;XM_032891201 XP_032747092 protein-coding 625854268 Adamts13 ADAM metallopeptidase with thrombospondin type 1 motif 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autoimmune thrombocytopenic purpura (ortholog); cholestasis (ortholog); FOUND IN extracellular space (ortholog) 5 9646535 9683169 - 22301074;30032202 116901245 MODEL JAAIVD010000023;XM_032902995;XM_032902996 XP_032758886;XP_032758887 A disintegrin and metalloproteinase with thrombospondin motifs 13 protein-coding 625854301 Kctd14 potassium channel tetramerization domain containing 14 2 95769536 95774731 + 22301074 116891697 MODEL JAAIVD010000001;XM_032892964 XP_032748855 BTB/POZ domain-containing protein KCTD14 protein-coding 625854307 LOC116888179 high mobility group protein B4-like X 118046411 118046911 - 116888179 MODEL JAAIVD010000014 pseudo 625854308 Gramd4 GRAM domain containing 4 INVOLVED IN negative regulation of toll-like receptor 9 signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN mitochondrion (ortholog) 1 255438325 255481269 + 30032202 116914750 MODEL JAAIVD010000025;XM_032919201 XP_032775092 GRAM domain-containing protein 4 protein-coding 625854330 LOC116904429 ATP-dependent RNA helicase DDX50-like 6 116440701 116441953 - 116904429 MODEL JAAIVD010000024 pseudo 625854331 Satl1 spermidine/spermine N1-acetyl transferase like 1 X 62204183 62217199 - 30032202 116888591 MODEL JAAIVD010000014;XM_032889890 XP_032745781 spermidine/spermine N(1)-acetyltransferase-like protein 1 protein-coding 625854340 LOC116890264 zinc finger protein 25-like 1 13390153 13408607 + 30032202 116890264 MODEL JAAIVD010000025;XM_032890985 XP_032746876 protein-coding 625854348 Fzd2 frizzled class receptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell-cell signaling (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 9 61900270 61902432 + 30032202 116909973 MODEL JAAIVD010000002;XM_032913751 XP_032769642 frizzled-2 protein-coding 625854353 LOC116911293 eukaryotic elongation factor 2 kinase-like 10 84948890 84951054 + 116911293 MODEL JAAIVD010000005 pseudo 625854354 Cracdl CRACD like 4 113803537 113862268 - 116899301 MODEL JAAIVD010000003;XM_032900957;XM_032900958 XP_032756848;XP_032756849 uncharacterized protein KIAA1211-like homolog protein-coding 625854372 LOC116912800 60S ribosomal protein L23a-like 11 51714937 51715459 + 22301074;30032202 116912800 MODEL JAAIVD010000006;XM_032916963 XP_032772854 protein-coding 625854376 Nav2 neuron navigator 2 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Hirschsprung's disease (ortholog); FOUND IN nucleoplasm (ortholog) 2 150233279 150601338 - 22301074;30032202 116892073 MODEL JAAIVD010000001;XM_032893544;XM_032893545;XM_032893546 XP_032749435;XP_032749436;XP_032749437 protein-coding 625854424 Chmp1a charged multivesicular body protein 1A ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); centrosome (ortholog) 17 42809699 42817381 - 30032202 116886132 MODEL JAAIVD010000011;XM_032887474;XM_032887475 XP_032743365;XP_032743366 protein-coding 625854439 Nlrp9 NLR family pyrin domain containing 9 INVOLVED IN blastocyst development (ortholog); defense response to virus (ortholog); innate immune response (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); FOUND IN canonical inflammasome complex (ortholog) 2 180253555 180291942 + 30032202 116894577 MODEL JAAIVD010000001;XM_032896299;XM_032896300 XP_032752190;XP_032752191 NACHT, LRR and PYD domains-containing protein 9 protein-coding 625854451 LOC116904163 bromodomain-containing protein 4-like 6 149700739 149703624 - 22301074 116904163 MODEL JAAIVD010000024;XM_032907060 XP_032762951 protein-coding 625854457 LOC116889961 olfactory receptor 6C2-like 1 161928876 161929795 - 116889961 MODEL JAAIVD010000025 pseudo 625854458 Cdh11 cadherin 11 INVOLVED IN aortic valve formation (ortholog); cell migration (ortholog); cell-substrate adhesion (ortholog); ASSOCIATED WITH Elsahy-Waters syndrome (ortholog); genetic disease (ortholog); Moebius syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 17 10994489 11149179 - 22301074;30032202 116886122 MODEL JAAIVD010000011;XM_032887461;XM_032887462 XP_032743352;XP_032743353 cadherin-11 protein-coding 625854478 LOC116913548 60S ribosomal protein L23a-like 12 61390029 61390568 - 22301074;30032202 116913548 MODEL JAAIVD010000007;XM_032917755 XP_032773646 protein-coding 625854483 LOC116892753 vomeronasal type-1 receptor 2-like 2 181036995 181037924 - 22301074;30032202 116892753 MODEL JAAIVD010000001;XM_032894631 XP_032750522 protein-coding 625854487 Tmem38a transmembrane protein 38A ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to caffeine (ortholog); endoplasmic reticulum organization (ortholog); inorganic cation transmembrane transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nuclear membrane (ortholog); sarcoplasmic reticulum (ortholog) 13 14389077 14405313 + 22301074;30032202 116914440 MODEL JAAIVD010000008;XM_032918739 XP_032774630 trimeric intracellular cation channel type A protein-coding 625854497 Adgrv1 adhesion G protein-coupled receptor V1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autosomal recessive nonsyndromic deafness (ortholog); beta-mannosidosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); periciliary membrane compartment (ortholog) 3 214774131 214855522 + 22301074;30032202 116897338 MODEL JAAIVD010000012;XM_032899093 XP_032754984 adhesion G-protein coupled receptor V1 protein-coding 625854540 LOC116900018 salivary lipocalin-like 5 11319914 11328504 - 30032202 116900018 MODEL JAAIVD010000023;XM_032901816 XP_032757707 protein-coding 625854548 Lrig2 leucine rich repeats and immunoglobulin like domains 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN innervation (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); urofacial syndrome (ortholog); Urofacial Syndrome 2 (ortholog); FOUND IN growth cone (ortholog); intracellular vesicle (ortholog); membrane (ortholog) 3 53595598 53653480 + 22301074 116896433 MODEL JAAIVD010000012;XM_032897582;XM_032897583 XP_032753473;XP_032753474 leucine-rich repeats and immunoglobulin-like domains protein 2 protein-coding 625854572 LOC116889381 probable peptide chain release factor C12orf65 homolog, mitochondrial X 62755138 62755672 - 116889381 MODEL JAAIVD010000014 pseudo 625854573 Atp8b2 ATPase phospholipid transporting 8B2 ENCODES a protein that exhibits phosphatidylcholine flippase activity (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) 3 63684545 63707839 + 22301074;30032202 116896629 MODEL JAAIVD010000012;XM_032897939 XP_032753830 phospholipid-transporting ATPase ID protein-coding 625854605 Cavin1 caveolae associated protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA primary transcript binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); protein secretion (ortholog); rRNA transcription (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 4 (ortholog); diabetes mellitus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 9 60248354 60262130 - 30032202 116909615 MODEL JAAIVD010000002;XM_032913239;XM_032913240 XP_032769130;XP_032769131 caveolae-associated protein 1 protein-coding 625854613 Pex11b peroxisomal biogenesis factor 11 beta ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peroxisome fission (ortholog); peroxisome organization (ortholog); regulation of peroxisome size (ortholog); ASSOCIATED WITH cataract (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); peroxisomal membrane (ortholog) 3 60660450 60669638 - 22301074;30032202 116896504 MODEL JAAIVD010000012;XM_032897680 XP_032753571 peroxisomal membrane protein 11B protein-coding 625854621 Ankrd11 ankyrin repeat domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); cardiac neural crest cell differentiation involved in heart development (ortholog); cognition (ortholog); ASSOCIATED WITH astigmatism (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 42514178 42667399 - 22301074;30032202 116886157 MODEL JAAIVD010000011;XM_032887524;XM_032887525;XM_032887526 XP_032743415;XP_032743416;XP_032743417 ankyrin repeat domain 11;ankyrin repeat domain-containing protein 11 protein-coding 625854644 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 171622537 171622609 - 116895151 MODEL JAAIVD010000001 trna 625854645 Psma3 proteasome 20S subunit alpha 3 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH proteasome-associated autoinflammatory syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) 7 84633037 84653290 + 22301074;2249692;2403356;30032202 116905137 MODEL D90258;JAAIVD010000026;X55985;XM_032907899;XM_032907900 BAA14302;CAA39457;XP_032763790;XP_032763791 proteasome subunit alpha type-3 protein-coding 625854663 LOC116887633 olfactory receptor 2B11-like 18 11051508 11054883 + 116887633 MODEL JAAIVD010000013 pseudo 625854664 Ndfip2 Nedd4 family interacting protein 2 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of protein transport (ortholog); negative regulation of transporter activity (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 12 19544514 19591176 - 22301074;30032202 116913332 MODEL JAAIVD010000007;XM_032917480 XP_032773371 NEDD4 family-interacting protein 2 protein-coding 625854676 Ccdc170 coiled-coil domain containing 170 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Estrogen Resistance (ortholog); FOUND IN cell junction (ortholog); ciliary basal body (ortholog); Golgi apparatus (ortholog) 2 199234737 199337668 + 30032202 116893528 MODEL JAAIVD010000001;XM_032895254 XP_032751145 coiled-coil domain-containing protein 170 protein-coding 625854690 Mtf1 metal regulatory transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cartilage homeostasis (ortholog); cellular response to zinc ion (ortholog); DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 33451190 33493028 - 30032202 116896847 MODEL JAAIVD010000025;XM_032898356 XP_032754247 protein-coding 625854705 Stoml3 stomatin like 3 INVOLVED IN signal transduction (ortholog); FOUND IN cilium (ortholog); membrane raft (ortholog); neuron projection (ortholog) 3 100935889 100952694 - 30032202 116895491 MODEL JAAIVD010000012;XM_032896749 XP_032752640 stomatin-like protein 3 protein-coding 625854716 LOC116885867 fructose-bisphosphate aldolase A-like 16 9349733 9351884 - 116885867 MODEL JAAIVD010000004 pseudo 625854717 Dtnb dystrobrevin beta ENCODES a protein that exhibits DNA binding (ortholog); phosphatase binding (ortholog); INVOLVED IN neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) 7 24255710 24448503 + 22301074;30032202 116906017 MODEL JAAIVD010000026;XM_032909065;XM_032909066;XM_032909067;XM_032909068;XM_032909069 XP_032764956;XP_032764957;XP_032764958;XP_032764959;XP_032764960 protein-coding 625854747 Snap23 synaptosome associated protein 23 ENCODES a protein that exhibits SNAP receptor activity (ortholog); syntaxin binding (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); exocytosis (ortholog); histamine secretion by mast cell (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Myocardial Ischemia (ortholog); FOUND IN adherens junction (ortholog); azurophil granule (ortholog); cilium (ortholog) 5 98698534 98727185 + 30032202 116901839 MODEL JAAIVD010000023;XM_032904015;XM_032904016;XM_032904017;XM_032904018 XP_032759906;XP_032759907;XP_032759908;XP_032759909 synaptosomal-associated protein 23 protein-coding 625854769 LOC116904698 small nucleolar RNA SNORA48 6 87881862 87882001 - 116904698 MODEL JAAIVD010000024;XR_004388394 snorna 625854772 Wnt11 Wnt family member 11 ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN adrenal gland development (ortholog); artery morphogenesis (ortholog); atrial septum development (ortholog); PARTICIPATES IN the Wnt/calcium signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); Animal Disease Models (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 2 97111938 97128000 + 22301074;30032202 116893956 MODEL JAAIVD010000001;XM_032895672;XM_032895673 XP_032751563;XP_032751564 protein Wnt-11 protein-coding 625854787 LOC116908886 protein SCO1 homolog, mitochondrial INVOLVED IN copper ion homeostasis (ortholog); cyclooxygenase pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); brain disease (ortholog); cytochrome-c oxidase deficiency disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) 9 46653958 46666425 + 30032202 116908886 MODEL JAAIVD010000002;XM_032912332 XP_032768223 protein-coding 625854797 Sin3b SIN3 transcription regulator family member B ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); negative regulation of DNA-templated transcription (ortholog); skeletal muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN autosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 13 19766697 19810348 - 30032202 116914378 MODEL JAAIVD010000008;XM_032918583 XP_032774474 paired amphipathic helix protein Sin3b protein-coding 625854820 Imp3 IMP U3 small nucleolar ribonucleoprotein 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); Mpp10 complex (ortholog); nucleolus (ortholog) 8 50845953 50846882 + 22301074;30032202 116907761 MODEL JAAIVD010000027;XM_032910899 XP_032766790 U3 small nucleolar ribonucleoprotein protein IMP3 protein-coding 625854825 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 24758180 24758251 - 116897677 MODEL JAAIVD010000012 trna 625854826 LOC116903864 mitochondrial import receptor subunit TOM7 homolog 6 22490283 22493300 - 22301074 116903864 MODEL JAAIVD010000024;XM_032906612 XP_032762503 protein-coding 625854830 Atrnl1 attractin like 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway 2 58003148 58543337 - 22301074;30032202 116891322 MODEL JAAIVD010000001;XM_032892245;XM_032892246 XP_032748136;XP_032748137 attractin-like protein 1 protein-coding 625854867 Eif3b eukaryotic translation initiation factor 3 subunit B ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); regulation of translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasmic stress granule (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) 16 12755739 12779051 - 22301074;30032202 116885407 MODEL JAAIVD010000004;XM_032886693 XP_032742584 protein-coding 625854890 Slit2 slit guidance ligand 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); GTPase inhibitor activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); axon extension involved in axon guidance (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); anti-basement membrane glomerulonephritis (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cell projection (ortholog) 11 57665902 57993742 - 22301074;30032202 116912754 MODEL JAAIVD010000006;XM_032916900;XM_032916902;XM_032916903;XM_032916904 XP_032772791;XP_032772793;XP_032772794;XP_032772795 slit homolog 2 protein protein-coding 625854936 Tes testin LIM domain protein ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH breast cancer (ortholog); childhood acute lymphocytic leukemia (ortholog); colitis (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 121870830 121908820 - 22301074 116904063 MODEL JAAIVD010000024;XM_032906925 XP_032762816 testin protein-coding 625854947 Fam3c FAM3 metabolism regulating signaling molecule C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN epidermal cell differentiation (ortholog); ERK1 and ERK2 cascade (ortholog); gene expression (ortholog); FOUND IN Golgi apparatus (ortholog) 6 116830686 116867838 + 30032202 116904044 MODEL JAAIVD010000024;XM_032906901 XP_032762792 protein FAM3C protein-coding 625854960 Dydc2 DPY30 domain containing 2 13 19573585 19587021 - 30032202 116915042 MODEL JAAIVD010000008;XM_032919446 XP_032775337 DPY30 domain-containing protein 2 protein-coding 625854967 LOC116908564 40S ribosomal protein S26-like 1 178250453 178250854 + 22301074;30032202 116908564 MODEL JAAIVD010000025;XM_032911771 XP_032767662 protein-coding 625854971 Ptges2 prostaglandin E synthase 2 ENCODES a protein that exhibits DNA binding (ortholog); lyase activity (ortholog); prostaglandin-E synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); lipid metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; type II interferon signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Carbon Tetrachloride Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); mitochondrion (ortholog) 5 3229844 3236980 - 22301074;30032202 116901147 MODEL JAAIVD010000023;XM_032902760 XP_032758651 protein-coding 625854982 Fndc3b fibronectin type III domain containing 3B INVOLVED IN fibroblast migration (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); keratoconus (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 126962291 127288290 + 22301074 116896988 MODEL JAAIVD010000012;XM_032898582 XP_032754473 fibronectin type III domain-containing protein 3B protein-coding 625855012 Ell2 elongation factor for RNA polymerase II 2 INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) 3 222150379 222219159 + 22301074;30032202 116897366 MODEL JAAIVD010000012;XM_032899125;XM_032899126 XP_032755016;XP_032755017 RNA polymerase II elongation factor ELL2 protein-coding 625855031 Pgpep1l pyroglutamyl-peptidase I like 2 132098382 132104057 + 30032202 116893253 MODEL JAAIVD010000001;XM_032895114 XP_032751005 pyroglutamyl-peptidase 1-like protein protein-coding 625855037 Slc25a32 solute carrier family 25 member 32 ENCODES a protein that exhibits FAD transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial FAD transmembrane transport (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH Exercise Intolerance (ortholog); prostate cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 212066972 212082641 + 30032202 116910825 MODEL JAAIVD010000025;XM_032914591 XP_032770482 mitochondrial folate transporter/carrier protein-coding 625855048 LOC116893220 olfactory receptor 14C36-like 2 114692052 114701601 + 22301074;30032202 116893220 MODEL JAAIVD010000001;XM_032895102 XP_032750993 protein-coding 625855052 Psmd11 proteasome 26S subunit, non-ATPase 11 INVOLVED IN proteasome assembly (ortholog); stem cell differentiation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 9 89941889 89986053 - 22301074;30032202 116908706 MODEL JAAIVD010000002;XM_032912038 XP_032767929 26S proteasome non-ATPase regulatory subunit 11 protein-coding 625855070 Ankdd1b ankyrin repeat and death domain containing 1B 3 200032092 200096702 + 22301074 116895679 MODEL JAAIVD010000012;XM_032896882 XP_032752773 ankyrin repeat and death domain-containing protein 1B protein-coding 625855089 LOC116901116 40S ribosomal protein S7-like 5 1197189 1197754 + 116901116 MODEL JAAIVD010000023 pseudo 625855090 LOC116891372 40-kDa huntingtin-associated protein 2 63068479 63070225 - 22301074;30032202 116891372 MODEL JAAIVD010000001;XM_032892372 XP_032748263 protein-coding 625855095 LOC116893007 malate dehydrogenase, mitochondrial-like 1 13053571 13054880 + 116893007 MODEL JAAIVD010000025 pseudo 625855096 LOC116913751 triosephosphate isomerase-like 12 71342153 71342942 + 116913751 MODEL JAAIVD010000007 pseudo 625855097 Rptn repetin FOUND IN cornified envelope (ortholog) 3 121274536 121278776 - 22301074;30032202 116895549 MODEL JAAIVD010000012;XM_032896789 XP_032752680 protein-coding 625855102 LOC116884111 U6 spliceosomal RNA 14 42449945 42450051 - 116884111 MODEL JAAIVD010000009;XR_004385842 snrna 625855105 LOC116899393 uncharacterized LOC116899393 4 129621672 129623458 + 116899393 MODEL JAAIVD010000003;XR_004387725 ncrna 625855110 Fbxl15 F-box and leucine rich repeat protein 15 INVOLVED IN bone mineralization (ortholog); G2/M transition of mitotic cell cycle (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 2 45789746 45792123 + 22301074 116891242 MODEL JAAIVD010000001;XM_032892110 XP_032748001 F-box/LRR-repeat protein 15 protein-coding 625855118 Ndrg3 NDRG family member 3 INVOLVED IN decidualization (ortholog); FOUND IN cytoplasm (ortholog) 5 136266784 136329042 - 30032202 116902213 MODEL JAAIVD010000023;XM_032904614 XP_032760505 protein NDRG3 protein-coding 625855139 LOC116910318 uncharacterized LOC116910318 9 52404586 52405618 - 116910318 MODEL JAAIVD010000002;XM_032914182 XP_032770073 uncharacterized protein LOC116910318 protein-coding 625855144 LOC116899599 intestinal-type alkaline phosphatase 1 4 159221593 159232688 - 30032202 116899599 MODEL JAAIVD010000003;XM_032901544;XM_032901545 XP_032757435;XP_032757436 alkaline phosphatase, germ cell type protein-coding 625855172 LOC116904704 small nucleolar RNA SNORA17 6 150860216 150860343 - 116904704 MODEL JAAIVD010000024;XR_004388399 snorna 625855175 Sgsm1 small G protein signaling modulator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) 16 40661018 40728262 + 22301074;30032202 116885161 MODEL JAAIVD010000004;XM_032886372;XM_032886373;XM_032886374;XM_032886375 XP_032742263;XP_032742264;XP_032742265;XP_032742266 protein-coding 625855213 LOC116914929 farnesyl pyrophosphate synthase-like 13 6417936 6449284 + 116914929 MODEL JAAIVD010000008 pseudo 625855214 LOC116914148 small nucleolar RNA SNORA17 12 18214388 18214471 - 116914148 MODEL JAAIVD010000007 pseudo 625855215 Ccnb3 cyclin B3 ASSOCIATED WITH autistic disorder (ortholog); Habitual Abortions (ortholog); osteosarcoma (ortholog); FOUND IN nucleoplasm (ortholog) X 15082728 15133698 + 30032202 116889237 MODEL JAAIVD010000014;XM_032890387 XP_032746278 G2/mitotic-specific cyclin-B3 protein-coding 625855230 Rb1 RB transcriptional corepressor 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); apoptotic process (ortholog); cell division (ortholog); PARTICIPATES IN ceramide signaling pathway; G1/S transition pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN chromatin lock complex (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog); cytoplasm (ortholog) 12 51063499 51215976 + 22301074;30032202 116913678 MODEL JAAIVD010000007;XM_032917967 XP_032773858 retinoblastoma-associated protein protein-coding 625855262 LOC116906216 Ig heavy chain V region PJ14-like 7 121373585 121374098 + 116906216 MODEL JAAIVD010000026 pseudo 625855263 LOC116904374 60S ribosomal protein L21-like 6 88985049 88985533 - 116904374 MODEL JAAIVD010000024 pseudo 625855264 Tesc tescalcin ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); phosphatase inhibitor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); male gonad development (ortholog); megakaryocyte development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lamellipodium (ortholog) 16 35769878 35803187 - 22301074 116885721 MODEL JAAIVD010000004;XM_032887029 XP_032742920 calcineurin B homologous protein 3 protein-coding 625855276 Zdhhc21 zDHHC palmitoyltransferase 21 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); hair follicle development (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 1 70869582 70921113 + 30032202 116900682 MODEL JAAIVD010000025;XM_032902389;XM_032902394;XM_032902401 XP_032758280;XP_032758285;XP_032758292 palmitoyltransferase ZDHHC21;zinc finger DHHC-type palmitoyltransferase 21 protein-coding 625855293 Stxbp3 syntaxin binding protein 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); syntaxin binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to type II interferon (ortholog); exocytosis (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH IMMUNE DYSREGULATION, AUTOIMMUNITY, AND AUTOINFLAMMATION (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytosol (ortholog) 3 49435758 49477023 + 22301074;30032202 116896354 MODEL JAAIVD010000012;XM_032897457 XP_032753348 syntaxin-binding protein 3 protein-coding 625855316 LOC116908330 U6 spliceosomal RNA 8 104992354 104992456 - 116908330 MODEL JAAIVD010000027;XR_004388886 snrna 625855319 Alox15b arachidonate 15-lipoxygenase type B ENCODES a protein that exhibits arachidonate 15-lipoxygenase activity (ortholog); arachidonate 8(S)-lipoxygenase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); endocannabinoid signaling pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN adherens junction (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 9 48783817 48792778 - 22301074;30032202 116910211 MODEL JAAIVD010000002;XM_032914089;XM_032914090;XM_032914092 XP_032769980;XP_032769981;XP_032769983 arachidonate 15-lipoxygenase B protein-coding 625855342 LOC116912645 alpha-enolase-like 11 4272707 4282553 - 116912645 MODEL JAAIVD010000006 pseudo 625855343 Arnt2 aryl hydrocarbon receptor nuclear translocator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH atrial fibrillation (ortholog); chronic obstructive pulmonary disease (ortholog); Webb-Dattani Syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 2 115945070 116098782 + 22301074;30032202 116891877 MODEL JAAIVD010000001;XM_032893284;XM_032893285;XM_032893286;XM_032893287 XP_032749175;XP_032749176;XP_032749177;XP_032749178 protein-coding 625855377 LOC116900375 olfactory receptor 5I1-like 5 69496702 69497655 - 22301074;30032202 116900375 MODEL JAAIVD010000023;XM_032902123 XP_032758014 protein-coding 625855381 Gpatch11 G-patch domain containing 11 FOUND IN kinetochore (ortholog) 7 14390511 14401596 - 22301074;30032202 116905902 MODEL JAAIVD010000026;XM_032908891;XM_032908892 XP_032764782;XP_032764783 G patch domain-containing protein 11 protein-coding 625855397 LOC116896367 cytochrome b561 domain-containing protein 1 3 50056207 50059740 + 30032202 116896367 MODEL JAAIVD010000012;XM_032897483;XM_032897484 XP_032753374;XP_032753375 protein-coding 625855406 Fbxo17 F-box protein 17 FOUND IN SCF ubiquitin ligase complex (ortholog) 2 167270073 167285191 - 22301074;30032202 116894467 MODEL JAAIVD010000001;XM_032896178;XM_032896179 XP_032752069;XP_032752070 F-box only protein 17 protein-coding 625855420 C1qtnf1 C1q and TNF related 1 ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of platelet activation (ortholog); negative regulation of platelet aggregation (ortholog); positive regulation of aldosterone secretion (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 9 65612174 65634256 - 22301074;30032202 116910021 MODEL JAAIVD010000002;XM_032913803;XR_004389122 XP_032769694 complement C1q tumor necrosis factor-related protein 1 protein-coding 625855431 LOC116900741 zinc finger protein 120-like 5 142459684 142462540 + 22301074 116900741 MODEL JAAIVD010000023;XM_032902446 XP_032758337 protein-coding 625855437 Tbc1d12 TBC1 domain family member 12 2 34868814 34946858 - 116891116 MODEL JAAIVD010000001;XM_032891831;XM_032891832 XP_032747722;XP_032747723 protein-coding 625855457 LOC116902538 small nucleolar RNA SNORA21 5 66376368 66376500 - 116902538 MODEL JAAIVD010000023;XR_004388141 snorna 625855460 Taf9 TATA-box binding protein associated factor 9 ENCODES a protein that exhibits ATPase binding (ortholog); C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 158034972 158038824 + 22301074;30032202 116897094 MODEL JAAIVD010000012;XM_032898733;XM_032898734 XP_032754624;XP_032754625 transcription initiation factor TFIID subunit 9 protein-coding 625855470 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889732 MODEL JAAIVD010000065 trna 625855471 LOC116900687 galactokinase-like 5 129701940 129703108 + 116900687 MODEL JAAIVD010000023 pseudo 625855472 Plin2 perilipin 2 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); Insulin Resistance (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 1 67346065 67371139 + 30032202 116900493 MODEL JAAIVD010000025;XM_032902231;XM_032902239;XM_032902241 XP_032758122;XP_032758130;XP_032758132 perilipin-2 protein-coding 625855491 LOC116914194 U6 spliceosomal RNA 12 63073152 63073253 + 116914194 MODEL JAAIVD010000007;XR_004389730 snrna 625855494 Cela1 chymotrypsin like elastase 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN digestive system development (ortholog); elastin catabolic process (ortholog); exocrine pancreas development (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog) 1 262423025 262436240 + 22301074;30032202 116883927 MODEL JAAIVD010000025;XM_032885182 XP_032741073 chymotrypsin-like elastase family member 1 protein-coding 625855506 Dus4l dihydrouridine synthase 4 like INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIi (ortholog) 7 45013075 45027997 - 22301074;30032202 116904956 MODEL JAAIVD010000026;XM_032907614;XM_032907615;XM_032907616 XP_032763505;XP_032763506;XP_032763507 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like protein-coding 625855523 LOC116904725 small nucleolar RNA SNORA17 6 149443845 149443974 - 116904725 MODEL JAAIVD010000024;XR_004388417 snorna 625855526 Far2 fatty acyl-CoA reductase 2 ENCODES a protein that exhibits alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH alopecia (ortholog); dry eye syndrome (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 6 5704576 5811723 + 30032202 116903103 MODEL JAAIVD010000024;XM_032905427 XP_032761318 protein-coding 625855542 LOC116889438 U6 spliceosomal RNA X 45803682 45803791 - 116889438 MODEL JAAIVD010000014;XR_004386400 snrna 625855545 LOC116909492 olfactory receptor 2T29-like 9 39556204 39557166 + 22301074 116909492 MODEL JAAIVD010000002;XM_032913090 XP_032768981 protein-coding 625855549 LOC116888882 vitamin K epoxide reductase complex subunit 1-like protein 1 X 86805026 86805460 - 22301074;30032202 116888882 MODEL JAAIVD010000014;XM_032890145 XP_032746036 protein-coding 625855554 LOC116885943 eukaryotic translation initiation factor 1-like 16 29183582 29183924 + 116885943 MODEL JAAIVD010000004 pseudo 625855555 C8H3orf18 chromosome 8 C3orf18 homolog 8 98655834 98663524 + 116907515 MODEL JAAIVD010000027;XM_032910517 XP_032766408 uncharacterized protein C3orf18 homolog protein-coding 625855564 Ptbp1 polypyrimidine tract binding protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); regulatory region RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac ventricle development (ortholog); gene expression (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN neuron projection terminus (ortholog); nucleus (ortholog) 1 155009877 155019662 - 22301074;30032202 116905578 MODEL JAAIVD010000025;XM_032908592;XM_032908594 XP_032764483;XP_032764485 polypyrimidine tract-binding protein 1 protein-coding 625855585 LOC116898370 60S ribosomal protein L9-like 4 63375016 63375632 + 116898370 MODEL JAAIVD010000003 pseudo 625855586 LOC116883182 60S ribosomal protein L27a-like 14 30607640 30609543 + 116883182 MODEL JAAIVD010000009 pseudo 625855587 Fam50a family with sequence similarity 50 member A INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH Armfield syndrome (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 128315005 128321823 + 30032202 116888978 MODEL JAAIVD010000014;XM_032890200 XP_032746091 protein FAM50A protein-coding 625855604 Ubap1l ubiquitin associated protein 1 like ASSOCIATED WITH fundus dystrophy (ortholog) 8 59674556 59686806 + 30032202 116907557 MODEL JAAIVD010000027;XM_032910580 XP_032766471 ubiquitin-associated protein 1-like protein-coding 625855613 LOC116889580 U6 spliceosomal RNA X 86178697 86178800 + 116889580 MODEL JAAIVD010000014;XR_004386496 snrna 625855616 Glb1 galactosidase beta 1 ENCODES a protein that exhibits beta-galactosidase activity (ortholog); galactoside binding (ortholog); hydrolase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); galactose catabolic process (ortholog); ganglioside catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH atopic dermatitis (ortholog); bone development disease (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 8 105006464 105078319 + 22301074;30032202 116907815 MODEL JAAIVD010000027;XM_032910991 XP_032766882 beta-galactosidase protein-coding 625855636 LOC116901092 zinc finger protein 844-like 5 155084638 155085919 + 116901092 MODEL JAAIVD010000023 pseudo 625855637 LOC116906191 mitogen-activated protein kinase 3-like 7 117331213 117332567 + 116906191 MODEL JAAIVD010000026 pseudo 625855638 LOC116910687 small nucleolar RNA SNORA43 9 90279055 90279201 - 116910687 MODEL JAAIVD010000002;XR_004389216 snorna 625855641 Tax1bp1 Tax1 binding protein 1 ENCODES a protein that exhibits kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 6 88299917 88355394 - 30032202 116903785 MODEL JAAIVD010000024;XM_032906475;XM_032906476;XM_032906477;XM_032906478;XM_032906479 XP_032762366;XP_032762367;XP_032762368;XP_032762369;XP_032762370 tax1-binding protein 1 protein-coding 625855670 Tmem71 transmembrane protein 71 ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) 1 240644520 240677971 - 116912205 MODEL JAAIVD010000025;XM_032916155 XP_032772046 protein-coding 625855684 Socs1 suppressor of cytokine signaling 1 ENCODES a protein that exhibits insulin-like growth factor receptor binding (ortholog); kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcoholic hepatitis (ortholog); allergic contact dermatitis (ortholog); FOUND IN nucleoplasm (ortholog) 9 11569765 11571469 + 22301074;30032202 116910160 MODEL JAAIVD010000002;XM_032914018 XP_032769909 protein-coding 625855690 LOC116911715 olfactory receptor 6Y1 10 53030875 53031852 + 22301074 116911715 MODEL JAAIVD010000005;XM_032915686 XP_032771577 protein-coding 625855693 C1H1orf141 chromosome 1 C1orf141 homolog 1 51286799 51339573 + 116887651 MODEL JAAIVD010000025;XM_032889253 XP_032745144 uncharacterized protein C1orf141 homolog protein-coding 625855703 Celf2 CUGBP Elav-like family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); post-transcriptional gene silencing (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); developmental and epileptic encephalopathy 97 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); Flemming body (ortholog); nucleoplasm (ortholog) 14 12877149 13699054 - 22301074;30032202 116883365 MODEL JAAIVD010000009;XM_032884454;XM_032884455;XM_032884456;XM_032884457;XM_032884458;XM_032884459;XM_032884460;XM_032884461;XM_032884462;XM_032884463;XM_032884465;XM_032884466;XM_032884467;XM_032884468;XM_032884469;XM_032884470;XM_032884471;XM_032884472;XM_032884473;XM_032884474;XM_032884476;XM_032884477;XM_032884478 XP_032740345;XP_032740346;XP_032740347;XP_032740348;XP_032740349;XP_032740350;XP_032740351;XP_032740352;XP_032740353;XP_032740354;XP_032740356;XP_032740357;XP_032740358;XP_032740359;XP_032740360;XP_032740361;XP_032740362;XP_032740363;XP_032740364;XP_032740365;XP_032740367;XP_032740368;XP_032740369 protein-coding 625855779 Prkar2b protein kinase cAMP-dependent type II regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); learning (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); granulosa cell tumor (ortholog); obesity (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) 7 45351669 45441765 - 22301074 116904960 MODEL JAAIVD010000026;XM_032907621 XP_032763512 cAMP-dependent protein kinase type II-beta regulatory subunit protein-coding 625855794 Cnbp CCHC-type zinc finger nucleic acid binding protein ENCODES a protein that exhibits G-quadruplex DNA binding (ortholog); single-stranded DNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN G-quadruplex DNA formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); myotonic disease (ortholog); myotonic dystrophy type 1 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 6 58464494 58473202 + 22301074;30032202 116903533 MODEL JAAIVD010000024;XM_032906144;XM_032906145;XM_032906146;XM_032906147 XP_032762035;XP_032762036;XP_032762037;XP_032762038 cellular nucleic acid-binding protein protein-coding 625855812 LOC116897521 small nucleolar RNA SNORA48 3 48692115 48692257 - 116897521 MODEL JAAIVD010000012;XR_004387537 snorna 625855815 LOC116912883 SMR1 protein-like 11 869778 874593 - 30032202 116912883 MODEL JAAIVD010000006;XM_032917121 XP_032773012 protein-coding 625855819 Mastl microtubule associated serine/threonine kinase like ENCODES a protein that exhibits kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN female meiosis II (ortholog); G2/M transition of mitotic cell cycle (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH thrombocytopenia (ortholog); Thrombocytopenia 2 (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); meiotic spindle (ortholog) 14 1438987 1473930 + 22301074;30032202 116883744 MODEL JAAIVD010000009;XM_032884978;XM_032884979;XM_032884980 XP_032740869;XP_032740870;XP_032740871 serine/threonine-protein kinase greatwall protein-coding 625855838 Mtch1 mitochondrial carrier 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein insertion into mitochondrial outer membrane (ortholog); FOUND IN mitochondrion (ortholog) 18 4521574 4537568 + 30032202 116887004 MODEL JAAIVD010000013;XM_032888487;XM_032888488 XP_032744378;XP_032744379 mitochondrial carrier homolog 1 protein-coding 625855859 Rpia ribose 5-phosphate isomerase A ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); Ribose 5-Phosphate Isomerase Deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 6 73723810 73749557 - 22301074;30032202 116903675 MODEL JAAIVD010000024;XM_032906334 XP_032762225 ribose-5-phosphate isomerase protein-coding 625855872 Rtl3 retrotransposon Gag like 3 X 63759080 63760956 - 22301074 116888339 MODEL JAAIVD010000014;XM_032889610 XP_032745501 retrotransposon Gag-like protein 3 protein-coding 625855877 LOC116898333 NACHT, LRR and PYD domains-containing protein 4A-like 4 43285386 43287186 - 116898333 MODEL JAAIVD010000003 pseudo 625855878 Plpp3 phospholipid phosphatase 3 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); delta-catenin binding (ortholog); integrin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); coronary artery disease (ortholog); Ventricular Dysfunction, Left (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum exit site (ortholog) 1 49380740 49455873 - 30032202 116899432 MODEL JAAIVD010000025;XM_032901190 XP_032757081 protein-coding 625855888 LOC116895742 heat shock cognate 71 kDa protein-like 3 34349151 34350665 + 116895742 MODEL JAAIVD010000012 pseudo 625855889 Cirop ciliated left-right organizer metallopeptidase ASSOCIATED WITH photosensitive trichothiodystrophy 1 (ortholog); visceral heterotaxy 12 (ortholog) 12 70302523 70308594 + 22301074;30032202 116913935 MODEL JAAIVD010000007;XM_032918198 XP_032774089 Lmln2 leishmanolysin like peptidase 2;leishmanolysin-like peptidase 2 protein-coding 625855906 LOC116913911 ski oncogene-like 12 27012995 27015118 - 116913911 MODEL JAAIVD010000007 pseudo 625855907 LOC116905572 60S ribosomal protein L39-like 7 96903478 96904190 + 22301074;30032202 116905572 MODEL JAAIVD010000026;XM_032908590 XP_032764481 protein-coding 625855911 LOC116885997 small nucleolar RNA SNORA67 16 4175589 4175731 - 116885997 MODEL JAAIVD010000004;XR_004386069 snorna 625855914 LOC116894697 activated RNA polymerase II transcriptional coactivator p15-like 2 217049369 217049753 - 116894697 MODEL JAAIVD010000001 pseudo 625855915 LOC116893826 acylcarnitine hydrolase-like 2 54890848 54917369 - 30032202 116893826 MODEL JAAIVD010000001;XM_032895540;XM_032895541;XM_032895542 XP_032751431;XP_032751432;XP_032751433 protein-coding 625855932 LOC116899838 small nucleolar RNA SNORA48 4 11503684 11503826 - 116899838 MODEL JAAIVD010000003;XR_004387835 snorna 625855935 Ccn4 cellular communication network factor 4 INVOLVED IN bone development (ortholog); glucose homeostasis (ortholog); negative regulation of chondrocyte differentiation (ortholog); ASSOCIATED WITH Airway Remodeling (ortholog); Experimental Liver Cirrhosis (ortholog); Hyperoxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 1 241006003 241034648 + 22301074;30032202 116890121 MODEL JAAIVD010000025;XM_032890859 XP_032746750 WNT1-inducible-signaling pathway protein 1 protein-coding 625855944 LOC116902849 uncharacterized LOC116902849 6 97378537 97381349 + 116902849 MODEL JAAIVD010000024;XR_004388243 ncrna 625855948 LOC116905843 ATP synthase subunit g, mitochondrial-like 7 109700175 109700646 - 22301074;30032202 116905843 MODEL JAAIVD010000026;XM_032908815 XP_032764706 protein-coding 625855953 Cfap107 cilia and flagella associated protein 107 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 1 14383245 14402777 + 116886266 MODEL JAAIVD010000025;XM_032887692 XP_032743583 C1H1orf158 chromosome 1 C1orf158 homolog;uncharacterized protein C1orf158 homolog protein-coding 625855961 LOC116893137 60S ribosomal protein L27a-like 2 87366075 87366502 + 116893137 MODEL JAAIVD010000001 pseudo 625855962 Wipf2 WAS/WASL interacting protein family member 2 9 55538975 55575442 - 22301074 116909209 MODEL JAAIVD010000002;XM_032912708;XM_032912709;XM_032912710 XP_032768599;XP_032768600;XP_032768601 WAS/WASL-interacting protein family member 2 protein-coding 625855978 LOC116885151 39S ribosomal protein L17, mitochondrial-like 16 3743716 3744210 + 116885151 MODEL JAAIVD010000004 pseudo 625855979 LOC116902214 uncharacterized LOC116902214 5 136224852 136225455 - 116902214 MODEL JAAIVD010000023;XR_004388050 ncrna 625855983 LOC116895835 60S ribosomal protein L7-like 3 80763494 80769573 - 116895835 MODEL JAAIVD010000012 pseudo 625855984 Gdap1l1 ganglioside induced differentiation associated protein 1 like 1 FOUND IN mitochondrion (ortholog) 5 154513233 154531426 - 116902382 MODEL JAAIVD010000023;XM_032904893;XM_032904894;XM_032904896 XP_032760784;XP_032760785;XP_032760787 ganglioside-induced differentiation-associated protein 1-like 1 protein-coding 625856002 LOC116914977 golgin subfamily A member 4-like 13 21933068 21938083 - 116914977 MODEL JAAIVD010000008 pseudo 625856003 LOC116895917 TD and POZ domain-containing protein 2-like 3 120866529 120867629 + 30032202 116895917 MODEL JAAIVD010000012;XM_032896992 XP_032752883 protein-coding 625856007 LOC116907712 40S ribosomal protein S25-like 8 91351115 91351547 - 30032202 116907712 MODEL JAAIVD010000027;XM_032910838 XP_032766729 protein-coding 625856011 Ly6k lymphocyte antigen 6 family member K INVOLVED IN binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytoplasm (ortholog) 1 247536412 247539905 - 30032202 116890134 MODEL JAAIVD010000025;XM_032890871 XP_032746762 lymphocyte antigen 6K protein-coding 625856019 Arhgap30 Rho GTPase activating protein 30 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); polycystic ovary syndrome (ortholog) 10 50559842 50580108 + 30032202 116911604 MODEL JAAIVD010000005;XM_032915580 XP_032771471 rho GTPase-activating protein 30 protein-coding 625856035 LOC116899408 uncharacterized LOC116899408 4 132865066 132872015 - 116899408 MODEL JAAIVD010000003 pseudo 625856036 Uso1 USO1 vesicle transport factor INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); membrane fusion (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Prostatic Neoplasms (ortholog); skin disease (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); Golgi apparatus (ortholog) 11 4969986 5034952 + 22301074;30032202 116912424 MODEL JAAIVD010000006;XM_032916492 XP_032772383 general vesicular transport factor p115 protein-coding 625856064 Rap1gap2 RAP1 GTPase activating protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); regulation of cell size (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 93125011 93345115 - 22301074;30032202 116909891 MODEL JAAIVD010000002;XM_032913630;XM_032913631;XM_032913632;XM_032913633;XM_032913634;XM_032913636;XM_032913637 XP_032769521;XP_032769522;XP_032769523;XP_032769524;XP_032769525;XP_032769527;XP_032769528 rap1 GTPase-activating protein 2 protein-coding 625856110 LOC116887068 60S ribosomal protein L35a-like 1 36395207 36395543 + 22301074;30032202 116887068 MODEL JAAIVD010000025;XM_032888573 XP_032744464 protein-coding 625856114 LOC116891279 insulin-1 2 51693947 51694512 + 22301074;30032202 116891279 MODEL JAAIVD010000001;XM_032892182 XP_032748073 protein-coding 625856120 Tigit T cell immunoreceptor with Ig and ITIM domains ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); negative regulation of interleukin-12 production (ortholog); negative regulation of natural killer cell mediated cytotoxicity (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 28553928 28570148 - 30032202 116897881 MODEL JAAIVD010000003;XM_032899285 XP_032755176 T-cell immunoreceptor with Ig and ITIM domains protein-coding 625856128 LOC116901070 ribosome biogenesis protein NSA2 homolog 1 119271442 119275659 - 116901070 MODEL JAAIVD010000025 pseudo 625856129 Mapk8ip1 mitogen-activated protein kinase 8 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of JNK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cytoplasm (ortholog) 5 66521880 66531447 - 22301074;30032202 116901643 MODEL JAAIVD010000023;XM_032903743;XM_032903744 XP_032759634;XP_032759635 C-Jun-amino-terminal kinase-interacting protein 1 protein-coding 625856147 Rad51ap2 RAD51 associated protein 2 FOUND IN protein-containing complex (ortholog) 7 31451394 31458155 + 116905722 MODEL JAAIVD010000026;XM_032908690 XP_032764581 RAD51-associated protein 2 protein-coding 625856153 Ctla4 cytotoxic T-lymphocyte associated protein 4 INVOLVED IN B cell receptor signaling pathway (ortholog); DNA damage response (ortholog); negative regulation of B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) 4 134979731 134985687 + 22301074;30032202 116898192 MODEL JAAIVD010000003;XM_032899555;XM_032899556 XP_032755446;XP_032755447 cytotoxic T-lymphocyte protein 4 protein-coding 625856162 LOC116905602 uncharacterized LOC116905602 7 28819677 28822468 - 116905602 MODEL JAAIVD010000026;XR_004388554 ncrna 625856167 Dhrs13 dehydrogenase/reductase 13 9 92407787 92412948 - 116908798 MODEL JAAIVD010000002;XM_032912200 XP_032768091 dehydrogenase/reductase SDR family member 13 protein-coding 625856176 Znf445 zinc finger protein 445 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded methylated DNA binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); negative regulation of gene expression via chromosomal CpG island methylation (ortholog); FOUND IN nucleus (ortholog) 8 113951066 113970468 - 22301074 116908007 MODEL JAAIVD010000027;XM_032911264 XP_032767155 protein-coding 625856187 LOC116887683 fatty acid-binding protein 5-like 18 25545277 25545671 - 116887683 MODEL JAAIVD010000013 pseudo 625856188 Atg2b autophagy related 2B ENCODES a protein that exhibits lipid transfer activity (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN endoplasmic reticulum (ortholog) 7 123274840 123344936 - 30032202 116905440 MODEL JAAIVD010000026;XM_032908381 XP_032764272 autophagy-related protein 2 homolog B protein-coding 625856234 LOC116887930 small nuclear ribonucleoprotein Sm D2-like X 59960495 59964777 - 116887930 MODEL JAAIVD010000014 pseudo 625856235 LOC116889614 elongin-B-like Y 2072280 2072783 - 116889614 MODEL JAAIVD010000015 pseudo 625856236 LOC116888879 40S ribosomal protein SA-like X 35610039 35610902 + 116888879 MODEL JAAIVD010000014 pseudo 625856237 Tmem114 transmembrane protein 114 FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 9 13581408 13597667 + 30032202 116909530 MODEL JAAIVD010000002;XM_032913136 XP_032769027 protein-coding 625856245 LOC116909351 uncharacterized LOC116909351 9 54342866 54347074 + 116909351 MODEL JAAIVD010000002;XR_004389068 ncrna 625856249 Taf1d TATA-box binding protein associated factor, RNA polymerase I subunit D ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); mitotic spindle (ortholog) 8 11101316 11106899 + 22301074;30032202 116907237 MODEL JAAIVD010000027;XM_032910199 XP_032766090 TATA box-binding protein-associated factor RNA polymerase I subunit D protein-coding 625856258 LOC116915002 transcription factor Sp2-like 13 31659875 31662473 - 116915002 MODEL JAAIVD010000008 pseudo 625856259 LOC116889282 dnaJ homolog subfamily A member 1-like 1 129325849 129326616 + 116889282 MODEL JAAIVD010000025 pseudo 625856260 Tlr3 toll like receptor 3 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to interferon-beta (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); alcohol dependence (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 13 42428925 42441404 + 22301074;30032202 116914649 MODEL JAAIVD010000008;XM_032919046;XR_004389758 XP_032774937 toll-like receptor 3 protein-coding 625856272 Ftl ferritin light chain ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN response to lead ion (ortholog); PARTICIPATES IN iron storage pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); basal ganglia disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN autolysosome (ortholog); ferritin complex (ortholog) 2 154051659 154053516 + 22301074;30032202 116892150 MODEL JAAIVD010000001;XM_032893645 XP_032749536 protein-coding 625856280 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28508270 28508341 + 116886019 MODEL JAAIVD010000004 trna 625856281 LOC116911670 60S ribosomal protein L37-like 1 232229354 232240987 - 116911670 MODEL JAAIVD010000025 pseudo 625856282 LOC116887510 acyl-protein thioesterase 1-like 18 49691053 49691738 - 116887510 MODEL JAAIVD010000013 pseudo 625856283 Pak3 p21 (RAC1) activated kinase 3 ENCODES a protein that exhibits GTPase binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite development (ortholog); dendritic spine development (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN endosome (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) X 95703579 95815497 + 22301074;30032202 116888567 MODEL JAAIVD010000014;XM_032889871 XP_032745762 serine/threonine-protein kinase PAK 3 protein-coding 625856304 Orai2 ORAI calcium release-activated calcium modulator 2 ENCODES a protein that exhibits store-operated calcium channel activity (ortholog); INVOLVED IN store-operated calcium entry (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN growth cone (ortholog); membrane (ortholog); plasma membrane (ortholog) 16 17843125 17861139 + 30032202 116885683 MODEL JAAIVD010000004;XM_032886991 XP_032742882 protein orai-2 protein-coding 625856311 LOC116911797 olfactory receptor 10X1-like 10 52966235 52967197 + 22301074 116911797 MODEL JAAIVD010000005;XM_032915799 XP_032771690 protein-coding 625856315 LOC116894210 olfactory receptor 494 2 106498020 106498964 + 22301074;30032202 116894210 MODEL JAAIVD010000001;XM_032895923 XP_032751814 protein-coding 625856318 LOC116884654 poly(A) polymerase alpha-like 1 211570820 211579836 - 116884654 MODEL JAAIVD010000025 pseudo 625856319 Suclg2 succinate-CoA ligase GDP-forming subunit beta ENCODES a protein that exhibits GDP binding (ortholog); protein-containing complex binding (ortholog); succinate-CoA ligase (GDP-forming) activity (ortholog); INVOLVED IN succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); endometriosis (ortholog); lung adenocarcinoma (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 6 51233582 51380915 + 22301074;30032202 116903479 MODEL JAAIVD010000024;XM_032906046 XP_032761937 succinate--CoA ligase [GDP-forming] subunit beta, mitochondrial protein-coding 625856331 LOC116904627 olfactory receptor 6C74-like 6 30179926 30180909 - 22301074;30032202 116904627 MODEL JAAIVD010000024;XM_032907418 XP_032763309 protein-coding 625856334 LOC116886755 5S ribosomal RNA 17 43160616 43160734 - 116886755 MODEL JAAIVD010000011;XR_004386157 rrna 625856337 Mterf4 mitochondrial transcription termination factor 4 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); heart development (ortholog); mitochondrial ribosome assembly (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 4 165227614 165232347 - 22301074;30032202 116899658 MODEL JAAIVD010000003;XM_032901669 XP_032757560 transcription termination factor 4, mitochondrial protein-coding 625856345 Plpp5 phospholipid phosphatase 5 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN phospholipid dephosphorylation (ortholog) 13 60773903 60778029 - 30032202 116915116 MODEL JAAIVD010000008;XM_032919562 XP_032775453 protein-coding 625856356 Tenm1 teneurin transmembrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); positive regulation of filopodium assembly (ortholog); positive regulation of MAP kinase activity (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); nucleus (ortholog) X 109386643 109561648 - 30032202 116888146 MODEL JAAIVD010000014;XM_032889476 XP_032745367 teneurin-1 protein-coding 625856379 LOC116904615 uncharacterized LOC116904615 6 29113248 29120009 - 116904615 MODEL JAAIVD010000024;XR_004388344 ncrna 625856383 LOC116896053 peroxiredoxin-1-like 3 200988719 200989469 - 116896053 MODEL JAAIVD010000012 pseudo 625856384 LOC116906182 polyglutamine-binding protein 1-like 7 110728660 110738053 + 116906182 MODEL JAAIVD010000026 pseudo 625856385 LOC116889077 thyroid hormone receptor-associated protein 3-like X 25342311 25345199 - 116889077 MODEL JAAIVD010000014 pseudo 625856386 Shtn1 shootin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle retrograde transport (ortholog); axonogenesis (ortholog); Cdc42 protein signal transduction (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); cell leading edge (ortholog) 2 57037958 57142287 + 116891316 MODEL JAAIVD010000001;XM_032892230;XM_032892233;XM_032892234 XP_032748121;XP_032748124;XP_032748125 shootin-1 protein-coding 625856416 LOC116890233 olfactory receptor 8S1-like 1 271139306 271140265 - 22301074 116890233 MODEL JAAIVD010000025;XM_032890963 XP_032746854 protein-coding 625856419 Mettl21c methyltransferase 21C, AARS1 lysine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); hormone-mediated apoptotic signaling pathway (ortholog); peptidyl-lysine methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 4 120062609 120070393 - 30032202 116898483 MODEL JAAIVD010000003;XM_032899730 XP_032755621 methyltransferase like 21C;protein-lysine methyltransferase METTL21C protein-coding 625856425 LOC116912057 uncharacterized LOC116912057 11 95439187 95440645 - 116912057 MODEL JAAIVD010000006 pseudo 625856426 LOC116886230 arylacetamide deacetylase-like 4 1 14019492 14045793 + 22301074 116886230 MODEL JAAIVD010000025;XM_032887630 XP_032743521 protein-coding 625856432 LOC116890569 small nucleolar RNA SNORA17 1 175128488 175128618 + 116890569 MODEL JAAIVD010000025;XR_004386738 snorna 625856435 Mcf2 MCF.2 cell line derived transforming sequence ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); dendrite development (ortholog); ASSOCIATED WITH Failure to Thrive (ortholog) X 119145614 119236534 - 22301074;30032202 116888182 MODEL JAAIVD010000014;XM_032889498 XP_032745389 proto-oncogene DBL protein-coding 625856466 LOC116905464 uncharacterized LOC116905464 7 127151556 127199164 + 116905464 MODEL JAAIVD010000026;XM_032908429;XM_032908430;XM_032908431;XM_032908432;XR_004388528;XR_004388529;XR_004388530;XR_004388531;XR_004388532;XR_004388533;XR_004388534;XR_004388535 XP_032764320;XP_032764321;XP_032764322;XP_032764323 uncharacterized protein LOC116905464 protein-coding 625856510 LOC116905806 zinc finger protein 431-like 1 155382183 155383277 - 30032202 116905806 MODEL JAAIVD010000025;XM_032908777 XP_032764668 protein-coding 625856515 Necab2 N-terminal EF-hand calcium binding protein 2 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); identical protein binding (ortholog); type 5 metabotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor internalization (ortholog); positive regulation of adenosine receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN plasma membrane (ortholog); postsynapse (ortholog); presynapse (ortholog) 17 39093781 39119653 + 22301074;30032202 116886314 MODEL JAAIVD010000011;XM_032887756 XP_032743647 N-terminal EF-hand calcium-binding protein 2 protein-coding 625856532 LOC116884931 39S ribosomal protein L30, mitochondrial-like 15 15378253 15423477 + 116884931 MODEL JAAIVD010000010 pseudo 625856533 Rtp4 receptor transporter protein 4 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog) 4 8413643 8417475 + 30032202 116898728 MODEL JAAIVD010000003;XM_032900036 XP_032755927 receptor-transporting protein 4 protein-coding 625856539 LOC116913947 protein mago nashi homolog 12 71618202 71618763 - 116913947 MODEL JAAIVD010000007 pseudo 625856540 LOC116885863 olfactory receptor 13J1 1 2788929 2789867 + 22301074 116885863 MODEL JAAIVD010000025;XM_032887192 XP_032743083 protein-coding 625856543 LOC116898605 translation machinery-associated protein 16-like 4 1152727 1153458 - 116898605 MODEL JAAIVD010000003 pseudo 625856544 LOC116905647 uncharacterized LOC116905647 7 5447333 5461249 - 116905647 MODEL JAAIVD010000026;XR_004388556 ncrna 625856548 LOC116887357 olfactory receptor 14J1-like 18 10767360 10768331 + 22301074;30032202 116887357 MODEL JAAIVD010000013;XM_032888952 XP_032744843 protein-coding 625856551 Smn1 survival of motor neuron 1, telomeric ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); DNA-templated transcription termination (ortholog); PARTICIPATES IN apoptotic cell death pathway; ASSOCIATED WITH adult spinal muscular atrophy (ortholog); childhood spinal muscular atrophy (ortholog); genetic disease (ortholog); FOUND IN Cajal body (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) 3 196465716 196475682 - 22301074;30032202 116897243 MODEL JAAIVD010000012;XM_032898974 XP_032754865 survival motor neuron protein protein-coding 625856564 Ddx56 DEAD-box helicase 56 ENCODES a protein that exhibits protein sequestering activity (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); defense response to virus (ortholog); host-mediated perturbation of viral RNA genome replication (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) 11 75182740 75191432 - 22301074;30032202 116912586 MODEL JAAIVD010000006;XM_032916702 XP_032772593 probable ATP-dependent RNA helicase DDX56 protein-coding 625856582 Dcun1d3 defective in cullin neddylation 1 domain containing 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of protein neddylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 81782233 81825198 + 30032202 116891591 MODEL JAAIVD010000001;XM_032892773;XM_032892774;XM_032892775;XM_032892777 XP_032748664;XP_032748665;XP_032748666;XP_032748668 DCN1-like protein 3 protein-coding 625856597 Tmf1 TATA element modulatory factor 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN acrosome assembly (ortholog); androgen receptor signaling pathway (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 6 49857317 49883134 + 30032202 116903474 MODEL JAAIVD010000024;XM_032906038 XP_032761929 TATA element modulatory factor protein-coding 625856618 LOC116903609 FAD-linked sulfhydryl oxidase ALR-like 6 106176195 106177231 + 116903609 MODEL JAAIVD010000024 pseudo 625856619 Tekt4 tektin 4 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); regulation of brood size (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 9 2735561 2740642 + 22301074;30032202 116909290 MODEL JAAIVD010000002;XM_032912829 XP_032768720 tektin-4 protein-coding 625856629 Cyth3 cytohesin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); Golgi vesicle transport (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 16 9410814 9502253 - 22301074 116885582 MODEL JAAIVD010000004;XM_032886878;XM_032886879;XM_032886880;XM_032886881 XP_032742769;XP_032742770;XP_032742771;XP_032742772 cytohesin-3 protein-coding 625856658 Slit1 slit guidance ligand 1 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); Roundabout binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Monomelic Amyotrophy (ortholog); Spinal Cord Injuries (ortholog); FOUND IN extracellular space (ortholog) 2 40708454 40852731 - 22301074;30032202 116891161 MODEL JAAIVD010000001;XM_032891963 XP_032747854 slit homolog 1 protein protein-coding 625856699 Luzp1 leucine zipper protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule binding (ortholog); INVOLVED IN apical constriction (ortholog); artery development (ortholog); contractile ring contraction (ortholog); FOUND IN actin filament (ortholog); centrosome (ortholog); CERF complex (ortholog) 1 21688134 21763044 - 116894283 MODEL JAAIVD010000025;XM_032895994;XM_032895999 XP_032751885;XP_032751890 protein-coding 625856711 LOC116913734 60S ribosomal protein L31-like 12 53329614 53330009 + 116913734 MODEL JAAIVD010000007 pseudo 625856712 LOC116911277 uncharacterized LOC116911277 10 59096984 59098080 - 116911277 MODEL JAAIVD010000005;XR_004389320 ncrna 625856716 Pitpnb phosphatidylinositol transfer protein beta ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); phosphatidylcholine transfer activity (ortholog); phosphatidylcholine transporter activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); phospholipid transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 16 42588705 42640632 - 22301074;30032202 116885164 MODEL JAAIVD010000004;XM_032886378;XM_032886379;XM_032886380 XP_032742269;XP_032742270;XP_032742271 phosphatidylinositol transfer protein beta isoform protein-coding 625856738 Ldlr low density lipoprotein receptor ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); artery development (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Animal Toxoplasmosis (ortholog); aortic atherosclerosis (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 8 17993107 18017686 + 22301074 116906732 MODEL JAAIVD010000027;XM_032909545 XP_032765436 low-density lipoprotein receptor protein-coding 625856760 Fos Fos proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute myocardial infarction (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nuclear matrix (ortholog) 7 99575709 99579136 + 22301074;30032202;3325886 116905298 MODEL JAAIVD010000026;X06769;XM_032908166 CAA29937;XP_032764057 proto-oncogene c-Fos protein-coding 625856768 Abca4 ATP binding cassette subfamily A member 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN phospholipid transfer to membrane (ortholog); phospholipid translocation (ortholog); photoreceptor cell maintenance (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 14 (ortholog); age related macular degeneration 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); photoreceptor outer segment (ortholog) 3 37640360 37773718 - 22301074;30032202 116895336 MODEL JAAIVD010000012;XM_032896643 XP_032752534 retinal-specific phospholipid-transporting ATPase ABCA4 protein-coding 625856821 LOC116900535 olfactory receptor 4F15-like 5 89580687 89581625 + 22301074 116900535 MODEL JAAIVD010000023;XM_032902262 XP_032758153 protein-coding 625856824 LOC116910924 60S ribosomal protein L34-like 10 55795276 55804286 + 116910924 MODEL JAAIVD010000005 pseudo 625856825 LOC116892904 zinc finger protein 54-like 1 63943824 63952978 + 116892904 MODEL JAAIVD010000025 pseudo 625856826 LOC116914685 histone PARylation factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); protein ADP-ribosyltransferase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 13 28103365 28119100 - 22301074;30032202 116914685 MODEL JAAIVD010000008;XM_032919102;XM_032919103 XP_032774993;XP_032774994 protein-coding 625856841 LOC116893982 prohibitin-like 1 70410802 70417276 + 116893982 MODEL JAAIVD010000025 pseudo 625856842 LOC116904757 small nucleolar RNA SNORA17 6 97660275 97660405 + 116904757 MODEL JAAIVD010000024;XR_004388433 snorna 625856845 Capn8 calpain 8 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); ASSOCIATED WITH celiac disease (ortholog) 10 60861998 60927322 + 22301074;30032202 116911530 MODEL JAAIVD010000005;XM_032915520 XP_032771411 calpain-8 protein-coding 625856870 LOC116897429 U6 spliceosomal RNA 3 120294680 120294783 - 116897429 MODEL JAAIVD010000012;XR_004387470 snrna 625856873 Tspan1 tetraspanin 1 INVOLVED IN protein stabilization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); membrane (ortholog) 1 39846074 39850464 - 22301074;30032202 116898268 MODEL JAAIVD010000025;XM_032899624 XP_032755515 tetraspanin-1 protein-coding 625856884 Lrrc25 leucine rich repeat containing 25 INVOLVED IN canonical NF-kappaB signal transduction (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); gene expression (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); microtubule cytoskeleton (ortholog) 13 12870988 12873741 + 22301074 116914956 MODEL JAAIVD010000008;XM_032919373 XP_032775264 leucine-rich repeat-containing protein 25 protein-coding 625856889 LOC116890334 U6 spliceosomal RNA 1 13071237 13071343 - 116890334 MODEL JAAIVD010000025;XR_004386557 snrna 625856892 Picalm phosphatidylinositol binding clathrin assembly protein ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); axonogenesis (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cell surface (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) 2 110968328 111050711 - 22301074;30032202 116891855 MODEL JAAIVD010000001;XM_032893230;XM_032893233;XM_032893234;XM_032893235;XM_032893236;XM_032893237;XM_032893238;XM_032893239;XM_032893240;XM_032893241;XM_032893242;XM_032893244;XM_032893245;XM_032893246;XM_032893247;XM_032893248;XM_032893249 XP_032749121;XP_032749124;XP_032749125;XP_032749126;XP_032749127;XP_032749128;XP_032749129;XP_032749130;XP_032749131;XP_032749132;XP_032749133;XP_032749135;XP_032749136;XP_032749137;XP_032749138;XP_032749139;XP_032749140 phosphatidylinositol-binding clathrin assembly protein protein-coding 625856939 Rab9a RAB9A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of exocytosis (ortholog); receptor-mediated endocytosis (ortholog); regulation of protein localization (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome (ortholog); lysosome (ortholog) X 30571270 30592204 - 22301074;30032202 116889271 MODEL JAAIVD010000014;XM_032890414 XP_032746305 ras-related protein Rab-9A protein-coding 625856946 Anapc4 anaphase promoting complex subunit 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) 11 53290089 53321620 - 22301074;30032202 116912157 MODEL JAAIVD010000006;XM_032916078 XP_032771969 anaphase-promoting complex subunit 4 protein-coding 625856978 Wif1 WNT inhibitory factor 1 INVOLVED IN positive regulation of fat cell differentiation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); Colorectal Neoplasms (ortholog); Endometrioid Carcinomas (ortholog) 1 199023685 199094277 + 30032202 116909470 MODEL JAAIVD010000025;XM_032913062 XP_032768953 protein-coding 625856992 Trmt11 tRNA methyltransferase 11 ENCODES a protein that exhibits tRNA (guanine(10)-N2)-methyltransferase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); tRNA (m2G10) methyltransferase complex (ortholog) 2 204217901 204663316 - 22301074;30032202 116892924 MODEL JAAIVD010000001;XM_032894850;XM_032894852;XM_032894853 XP_032750741;XP_032750743;XP_032750744 tRNA (guanine(10)-N2)-methyltransferase homolog;tRNA methyltransferase 11 homolog protein-coding 625857014 LOC116885672 cytochrome c oxidase assembly factor 3 homolog, mitochondrial-like 16 8101952 8102871 + 116885672 MODEL JAAIVD010000004 pseudo 625857015 LOC116914494 defensin alpha-like protein 1 13 64745355 64775960 + 22301074;30032202 116914494 MODEL JAAIVD010000008;XM_032918807;XM_032918808;XM_032918809 XP_032774698;XP_032774699;XP_032774700 protein-coding 625857025 LOC116888680 eukaryotic peptide chain release factor subunit 1-like X 121565477 121566898 - 116888680 MODEL JAAIVD010000014 pseudo 625857026 Gbx1 gastrulation brain homeobox 1 INVOLVED IN adult walking behavior (ortholog); neuron fate commitment (ortholog); proprioception (ortholog); FOUND IN nucleus (ortholog) 6 153700487 153724998 - 22301074;30032202 116903012 MODEL JAAIVD010000024;XM_032905322 XP_032761213 homeobox protein GBX-1 protein-coding 625857032 LOC116913481 kelch repeat and BTB domain-containing protein 7-like 12 44922591 44927644 - 22301074 116913481 MODEL JAAIVD010000007;XM_032917683 XP_032773574 protein-coding 625857037 LOC116902647 U2 spliceosomal RNA 5 45878405 45878565 + 116902647 MODEL JAAIVD010000023 pseudo 625857038 Txk TXK tyrosine kinase INVOLVED IN adaptive immune response (ortholog); NK T cell differentiation (ortholog); positive regulation of cytokine production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 11 29503607 29549787 - 22301074;30032202 116912290 MODEL JAAIVD010000006;XM_032916289 XP_032772180 tyrosine-protein kinase TXK protein-coding 625857056 Dagla diacylglycerol lipase alpha ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); diacylglycerol catabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN dendrite membrane (ortholog); dendritic spine membrane (ortholog); early endosome membrane (ortholog) 2 9722741 9779350 - 22301074;30032202 116890950 MODEL JAAIVD010000001;XM_032891596 XP_032747487 sn1-specific diacylglycerol lipase alpha protein-coding 625857080 LOC116913756 endosome-associated-trafficking regulator 1-like 12 25004816 25006758 + 30032202 116913756 MODEL JAAIVD010000007;XM_032918063 XP_032773954 protein-coding 625857085 LOC116914136 small nucleolar RNA SNORA17 12 34072344 34072473 - 116914136 MODEL JAAIVD010000007;XR_004389697 snorna 625857088 LOC116911998 dnaJ homolog subfamily A member 3, mitochondrial-like 11 48757248 48757967 - 116911998 MODEL JAAIVD010000006 pseudo 625857089 LOC116899716 uncharacterized LOC116899716 1 53206616 53208331 + 116899716 MODEL JAAIVD010000025;XR_004387751 ncrna 625857093 LOC116899574 small EDRK-rich factor 2-like 1 51565198 51565400 - 116899574 MODEL JAAIVD010000025 pseudo 625857094 LOC116910425 interleukin-3 9 36725730 36728469 - 22301074 116910425 MODEL JAAIVD010000002;XM_032914269;XM_032914270 XP_032770160;XP_032770161 protein-coding 625857105 Ppig peptidylprolyl isomerase G ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN cytosol (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) 5 47023149 47051713 + 22301074;30032202 116901484 MODEL JAAIVD010000023;XM_032903439;XM_032903440;XM_032903441;XM_032903442;XM_032903443;XM_032903444;XM_032903445;XM_032903447;XM_032903448 XP_032759330;XP_032759331;XP_032759332;XP_032759333;XP_032759334;XP_032759335;XP_032759336;XP_032759338;XP_032759339 peptidyl-prolyl cis-trans isomerase G protein-coding 625857151 LOC116910189 uncharacterized LOC116910189 9 54913488 54919397 + 116910189 MODEL JAAIVD010000002;XR_004389141 ncrna 625857156 Wac WW domain containing adaptor with coiled-coil ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH DeSanto-Shinawi syndrome (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog) 14 27947754 28008458 - 30032202 116883717 MODEL JAAIVD010000009;XM_032884933;XM_032884934;XM_032884936;XM_032884937;XM_032884938;XM_032884939;XM_032884940;XM_032884941;XM_032884942 XP_032740824;XP_032740825;XP_032740827;XP_032740828;XP_032740829;XP_032740830;XP_032740831;XP_032740832;XP_032740833 WW domain-containing adapter protein with coiled-coil protein-coding 625857192 Blvra biliverdin reductase A ENCODES a protein that exhibits biliberdin reductase (NADH) activity (ortholog); biliverdin reductase [NAD(P)H] activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); canonical NF-kappaB signal transduction (ortholog); chemotaxis (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cholestasis (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 105908551 105928074 + 22301074 116901925 MODEL JAAIVD010000023;XM_032904147;XM_032904148 XP_032760038;XP_032760039 protein-coding 625857208 Mrap melanocortin 2 receptor accessory protein ENCODES a protein that exhibits corticotropin hormone receptor binding (ortholog); identical protein binding (ortholog); type 1 melanocortin receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH adrenal gland disease (ortholog); genetic disease (ortholog); glucocorticoid deficiency 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 4 53838011 53848614 - 30032202 116897982 MODEL JAAIVD010000003;XM_032899386 XP_032755277 melanocortin-2 receptor accessory protein protein-coding 625857215 Eif1b eukaryotic translation initiation factor 1B 8 111706228 111708925 + 22301074;30032202 116907945 MODEL JAAIVD010000027;XM_032911165 XP_032767056 protein-coding 625857223 LOC116894857 U6 spliceosomal RNA 2 38793581 38793683 - 116894857 MODEL JAAIVD010000001;XR_004387071 snrna 625857226 LOC116894152 uncharacterized LOC116894152 2 104852993 104888531 + 116894152 MODEL JAAIVD010000001;XR_004387020 ncrna 625857230 LOC116899867 small nucleolar RNA SNORA17 4 143581034 143581161 - 116899867 MODEL JAAIVD010000003;XR_004387861 snorna 625857233 Znf608 zinc finger protein 608 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 15 75766745 75873841 - 30032202 116884984 MODEL JAAIVD010000010;XM_032886203;XM_032886204 XP_032742094;XP_032742095 protein-coding 625857249 Ankrd45 ankyrin repeat domain 45 INVOLVED IN cell population proliferation (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) 10 40446006 40461949 + 22301074 116911272 MODEL JAAIVD010000005;XM_032915176 XP_032771067 ankyrin repeat domain-containing protein 45 protein-coding 625857258 Kdm7a lysine demethylase 7A ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 6 100584737 100649411 + 30032202 116903934 MODEL JAAIVD010000024;XM_032906712 XP_032762603 lysine-specific demethylase 7A protein-coding 625857282 LOC116909536 keratin-associated protein 4-12-like 9 54549611 54550183 - 22301074;30032202 116909536 MODEL JAAIVD010000002;XM_032913151;XM_032913153 XP_032769042;XP_032769044 protein-coding 625857289 Srpk2 SRSF protein kinase 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN angiogenesis (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 152663209 152823701 - 22301074;30032202 116904189 MODEL JAAIVD010000024;XM_032907098;XM_032907099;XM_032907100;XM_032907101 XP_032762989;XP_032762990;XP_032762991;XP_032762992 protein-coding 625857318 Msrb3 methionine sulfoxide reductase B3 ENCODES a protein that exhibits peptide-methionine (R)-S-oxide reductase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein repair (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 74 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 1 198846995 198908926 - 22301074;30032202 116883301 MODEL JAAIVD010000025;XM_032884391 XP_032740282 methionine-R-sulfoxide reductase B3 protein-coding 625857329 LOC116902837 60S ribosomal protein L36a-like 6 90315497 90315866 - 22301074;30032202 116902837 MODEL JAAIVD010000024;XM_032905167 XP_032761058 protein-coding 625857334 Sra1 steroid receptor RNA activator 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); steroid receptor RNA activator RNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); Kallmann syndrome (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 7715494 7719604 + 30032202 116884345 MODEL JAAIVD010000010;XM_032885480 XP_032741371 protein-coding 625857343 LOC116891640 40S ribosomal protein S5-like 2 88139643 88140352 - 116891640 MODEL JAAIVD010000001;XR_004386853 pseudo 625857346 LOC116902603 small nucleolar RNA SNORA17 5 57880688 57880808 + 116902603 MODEL JAAIVD010000023 pseudo 625857347 Ippk inositol-pentakisphosphate 2-kinase ENCODES a protein that exhibits inositol-1,3,4,5,6-pentakisphosphate 2-kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN nucleolus (ortholog) 14 68403022 68441738 + 22301074;30032202 116883420 MODEL JAAIVD010000009;XM_032884548;XM_032884549 XP_032740439;XP_032740440 protein-coding 625857368 Tagln transgelin INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Carotid Artery Injuries (ortholog); Colonic Neoplasms (ortholog) 8 40450401 40455927 - 22301074 116906704 MODEL JAAIVD010000027;XM_032909508 XP_032765399 protein-coding 625857377 Alg3 ALG3 alpha-1,3- mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Id (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 4 5430172 5435491 - 30032202 116898696 MODEL JAAIVD010000003;XM_032899957;XM_032899958 XP_032755848;XP_032755849 dol-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase protein-coding 625857393 Nucks1 nuclear casein kinase and cyclin dependent kinase substrate 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); chromatin organization (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 10 3908113 3936761 - 30032202 116910982 MODEL JAAIVD010000005;XM_032914693;XM_032914695 XP_032770584;XP_032770586 nuclear ubiquitous casein and cyclin-dependent kinase substrate 1 protein-coding 625857408 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 170259067 170259138 - 116890647 MODEL JAAIVD010000025 trna 625857409 Suco SUN domain containing ossification factor INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of bone remodeling (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 5 (ortholog); FOUND IN membrane (ortholog); rough endoplasmic reticulum (ortholog) 10 41118182 41182540 - 30032202 116910878 MODEL JAAIVD010000005;XM_032914643;XM_032914644;XM_032914645;XM_032914646;XM_032914647;XM_032914648;XR_004389289 XP_032770534;XP_032770535;XP_032770536;XP_032770537;XP_032770538;XP_032770539 SUN domain-containing ossification factor protein-coding 625857451 LOC116915028 neutrophil antibiotic peptide NP-2-like 13 64843794 64844635 - 22301074;30032202 116915028 MODEL JAAIVD010000008;XM_032919436 XP_032775327 protein-coding 625857455 Ddias DNA damage induced apoptosis suppressor INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); cellular response to hydroperoxide (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 108320533 108344355 + 30032202 116891842 MODEL JAAIVD010000001;XM_032893209 XP_032749100 DNA damage-induced apoptosis suppressor protein protein-coding 625857465 Cdhr3 cadherin related family member 3 ASSOCIATED WITH asthma (ortholog); COVID-19 (ortholog); otitis media (ortholog); FOUND IN plasma membrane (ortholog) 7 46379159 46439272 - 22301074 116905665 MODEL JAAIVD010000026;XM_032908649 XP_032764540 cadherin-related family member 3 protein-coding 625857486 LOC116896242 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 3 27572494 27573488 + 116896242 MODEL JAAIVD010000012 pseudo 625857487 Ap2b1 adaptor related protein complex 2 subunit beta 1 ENCODES a protein that exhibits clathrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin adaptor complex (ortholog); clathrin coat (ortholog) 9 87279064 87384500 - 22301074;30032202 116909236 MODEL JAAIVD010000002;XM_032912737;XM_032912739;XM_032912740;XM_032912741;XM_032912742 XP_032768628;XP_032768630;XP_032768631;XP_032768632;XP_032768633 AP-2 complex subunit beta protein-coding 625857526 C3H4orf17 chromosome 3 C4orf17 homolog 3 20976366 20991982 + 116895302 MODEL JAAIVD010000012;XM_032896614 XP_032752505 uncharacterized protein C4orf17 homolog protein-coding 625857535 Ubfd1 ubiquitin family domain containing 1 2 79733882 79760952 - 30032202 116891560 MODEL JAAIVD010000001;XM_032892737;XM_032892738;XM_032892739;XM_032892740 XP_032748628;XP_032748629;XP_032748630;XP_032748631 ubiquitin domain-containing protein UBFD1 protein-coding 625857556 Cdk17 cyclin dependent kinase 17 ASSOCIATED WITH multiple sclerosis (ortholog) 1 172222546 172298964 + 22301074;30032202;9370357 116908184 MODEL AB005540;JAAIVD010000025;XM_032911475 BAA22332;XP_032767366 PCTAIRE2 cyclin-dependent kinase 17 protein-coding 625857577 Nme6 NME/NM23 nucleoside diphosphate kinase 6 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of mitotic nuclear division (ortholog); nucleotide metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 100454195 100460025 + 22301074;30032202 116907795 MODEL JAAIVD010000027;XM_032910936;XM_032910937;XM_032910938;XM_032910939;XM_032910941;XM_032910942 XP_032766827;XP_032766828;XP_032766829;XP_032766830;XP_032766832;XP_032766833 nucleoside diphosphate kinase 6 protein-coding 625857602 Mdm4 MDM4 regulator of p53 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN atrial septum development (ortholog); atrioventricular valve morphogenesis (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Bone Marrow Failure Syndrome 6 (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); transcription repressor complex (ortholog) 10 2817249 2851805 + 22301074;30032202 116911707 MODEL JAAIVD010000005;XM_032915671;XM_032915672 XP_032771562;XP_032771563 protein Mdm4 protein-coding 625857620 Abitram actin binding transcription modulator ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); regulation of actin filament polymerization (ortholog); regulation of filopodium assembly (ortholog); FOUND IN dendrite (ortholog); filopodium tip (ortholog); growth cone (ortholog) 1 94808985 94814091 - 30032202 116901682 MODEL JAAIVD010000025;XM_032903808 XP_032759699 protein Abitram protein-coding 625857630 LOC116889783 zinc finger protein 501-like 30032202 116889783 MODEL JAAIVD010000269;XM_032890635 XP_032746526 protein-coding 625857631 LOC116900146 olfactory receptor 5C1 5 14908632 14912348 + 22301074;30032202 116900146 MODEL JAAIVD010000023;XM_032901920 XP_032757811 protein-coding 625857637 Ccdc194 coiled-coil domain containing 194 13 13465365 13468363 + 116914461 MODEL JAAIVD010000008;XM_032918761 XP_032774652 coiled-coil domain-containing protein 194 protein-coding 625857643 LOC116890308 U4 spliceosomal RNA 1 271353389 271353518 + 116890308 MODEL JAAIVD010000025 pseudo 625857644 Znf18 zinc finger protein 18 9 45411688 45435134 + 30032202 116910517 MODEL JAAIVD010000002;XM_032914419 XP_032770310 protein-coding 625857655 LOC116885889 zinc finger protein 25-like 16 14837572 14857433 - 22301074 116885889 MODEL JAAIVD010000004;XM_032887212 XP_032743103 protein-coding 625857664 Ldhal6b lactate dehydrogenase A like 6B INVOLVED IN lactate metabolic process (ortholog); PARTICIPATES IN malonic aciduria pathway; methylmalonic aciduria, cobalamin-related pathway; propanoate metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 2 193393060 193394477 + 22301074 116892860 MODEL JAAIVD010000001;XM_032894756;XM_032894757 XP_032750647;XP_032750648 L-lactate dehydrogenase A-like 6B protein-coding 625857674 Mall mal, T cell differentiation protein like FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic vesicle (ortholog); Golgi membrane (ortholog) 5 106486462 106511001 - 22301074;30032202 116901940 MODEL JAAIVD010000023;XM_032904171 XP_032760062 MAL-like protein protein-coding 625857682 LOC116912498 uncharacterized LOC116912498 11 18711310 18713583 + 116912498 MODEL JAAIVD010000006;XR_004389465 ncrna 625857686 LOC116905664 neurexin-3-beta 7 103048944 103574571 + 116905664 MODEL JAAIVD010000026;XM_032908640;XM_032908641;XM_032908642;XM_032908643;XM_032908645;XM_032908646;XM_032908647;XM_032908648 XP_032764531;XP_032764532;XP_032764533;XP_032764534;XP_032764536;XP_032764537;XP_032764538;XP_032764539 protein-coding 625857707 Tsnare1 t-SNARE domain containing 1 1 247180326 247181222 - 30032202 116889926 MODEL JAAIVD010000025;XM_032890742 XP_032746633 t-SNARE domain-containing protein 1 protein-coding 625857711 Msl3 MSL complex subunit 3 ENCODES a protein that exhibits DNA binding (ortholog); histone H4K16ac reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Basilicata-Akhtar syndrome (ortholog); Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); FOUND IN MSL complex (ortholog); nucleus (ortholog) X 28065980 28083302 + 30032202 116888282 MODEL JAAIVD010000014;XM_032889561 XP_032745452 male-specific lethal 3 homolog protein-coding 625857728 LOC116885722 40S ribosomal protein S26-like 16 9948418 9948838 + 116885722 MODEL JAAIVD010000004 pseudo 625857729 Acsbg2 acyl-CoA synthetase bubblegum family member 2 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 88224983 88254695 - 30032202 116899200 MODEL JAAIVD010000003;XM_032900785 XP_032756676 long-chain-fatty-acid--CoA ligase ACSBG2 protein-coding 625857748 LOC116912696 importin subunit alpha-4-like 11 18899402 18905587 - 22301074;30032202 116912696 MODEL JAAIVD010000006;XM_032916827 XP_032772718 protein-coding 625857754 Prdx1 peroxiredoxin 1 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); peroxidase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); erythrocyte homeostasis (ortholog); fibroblast proliferation (ortholog); ASSOCIATED WITH asbestosis (ortholog); COVID-19 (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); mitochondrial matrix (ortholog) 1 40326188 40336515 + 30032202 116898445 MODEL JAAIVD010000025;XM_032899713 XP_032755604 peroxiredoxin-1 protein-coding 625857764 Rplp0 ribosomal protein lateral stalk subunit P0 ENCODES a protein that exhibits peptide binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to interleukin-4 (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Down syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 16 38264591 38267967 - 1742361;22301074;30032202 116885424 MODEL JAAIVD010000004;X15096;XM_032886710 CAA33199;XP_032742601 60S acidic ribosomal protein P0 protein-coding 625857775 LOC116912994 small nucleolar RNA SNORA17 11 68460956 68461085 - 116912994 MODEL JAAIVD010000006;XR_004389557 snorna 625857778 LOC116883935 glyceraldehyde-3-phosphate dehydrogenase-like 14 3473085 3474070 + 116883935 MODEL JAAIVD010000009 pseudo 625857779 LOC116904286 immunoglobulin kappa variable 2-29-like 6 42461761 42462558 + 116904286 MODEL JAAIVD010000024 pseudo 625857780 Usp19 ubiquitin specific peptidase 19 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); Hsp90 protein binding (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); long QT syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 8 99824616 99834985 + 22301074 116907593 MODEL JAAIVD010000027;XM_032910634 XP_032766525 ubiquitin carboxyl-terminal hydrolase 19 protein-coding 625857810 Smim38 small integral membrane protein 38 2 4529547 4530048 + 116893605 MODEL JAAIVD010000001;XM_032895313 XP_032751204 protein-coding 625857813 Pdik1l PDLIM1 interacting kinase 1 like FOUND IN nucleoplasm (ortholog) 1 23957876 23968725 + 22301074;30032202 116894797 MODEL JAAIVD010000025;XM_032896456 XP_032752347 serine/threonine-protein kinase PDIK1L protein-coding 625857820 Sst somatostatin ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN hyperosmotic response (ortholog); regulation of cell migration (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); disease of cellular proliferation (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) 4 8680393 8681663 - 22301074;30032202 116898730 MODEL JAAIVD010000003;XM_032900037 XP_032755928 protein-coding 625857826 Il17rb interleukin 17 receptor B INVOLVED IN positive regulation of inflammatory response (ortholog); positive regulation of interleukin-13 production (ortholog); positive regulation of interleukin-5 production (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 13 5711294 5723870 - 30032202 116914818 MODEL JAAIVD010000008;XM_032919275 XP_032775166 interleukin-17 receptor B protein-coding 625857841 LOC116902744 cytochrome P450 2C55-like 6 59984328 59994106 + 22301074;30032202 116902744 MODEL JAAIVD010000024;XM_032905092 XP_032760983 protein-coding 625857847 Ebpl EBP like FOUND IN endoplasmic reticulum (ortholog) 12 63053878 63077209 + 30032202 116913782 MODEL JAAIVD010000007;XM_032918088 XP_032773979 emopamil-binding protein-like protein-coding 625857855 Tmem38b transmembrane protein 38B INVOLVED IN bone development (ortholog); bone mineralization (ortholog); cellular response to caffeine (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 97587575 97622963 + 22301074;30032202 116901841 MODEL JAAIVD010000025;XM_032904026 XP_032759917 trimeric intracellular cation channel type B protein-coding 625857865 Trnan-auu transfer RNA asparagine (anticodon AUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 13303665 13303739 + 116911914 MODEL JAAIVD010000005 trna 625857866 LOC116889525 small nucleolar RNA SNORA17 X 74702965 74703089 - 116889525 MODEL JAAIVD010000014 pseudo 625857867 Morn4 MORN repeat containing 4 INVOLVED IN response to axon injury (ortholog); FOUND IN cytoplasm (ortholog); filopodium tip (ortholog); stereocilium tip (ortholog) 2 41192635 41194562 - 116891173 MODEL JAAIVD010000001;XM_032891987 XP_032747878 MORN repeat-containing protein 4 protein-coding 625857875 LOC116900640 40S ribosomal protein S15-like 5 110829530 110830037 + 22301074;30032202 116900640 MODEL JAAIVD010000023;XM_032902351 XP_032758242 protein-coding 625857880 Rab6a RAB6A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); early endosome to Golgi transport (ortholog); peptidyl-cysteine methylation (ortholog); FOUND IN acrosomal membrane (ortholog); ciliary basal body (ortholog); cytoplasmic vesicle (ortholog) 2 98908736 98946349 + 22301074 116891746 MODEL JAAIVD010000001;XM_032893055;XM_032893057 XP_032748946;XP_032748948 ras-related protein Rab-6A protein-coding 625857896 Nit1 nitrilase 1 ENCODES a protein that exhibits deaminated glutathione amidase activity (ortholog); INVOLVED IN amide catabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 10 50507204 50510660 - 22301074 116910851 MODEL JAAIVD010000005;XM_032914608 XP_032770499 deaminated glutathione amidase protein-coding 625857906 Rpgr retinitis pigmentosa GTPase regulator ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); cilium assembly (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH Ciliary Motility Disorders (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN cell projection (ortholog); centrosome (ortholog); ciliary basal body (ortholog) X 11048535 11135423 + 30032202 116888359 MODEL JAAIVD010000014;XM_032889628 XP_032745519 X-linked retinitis pigmentosa GTPase regulator protein-coding 625857917 LOC116891149 thymosin beta-4 1 3416691 3417188 + 22301074;30032202 116891149 MODEL JAAIVD010000025;XM_032891936 XP_032747827 protein-coding 625857922 Tom1 target of myb1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); clathrin heavy chain binding (ortholog); myosin VI binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endosomal transport (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH immunodeficiency 85 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 17 4419819 4454179 + 22301074;30032202 116886337 MODEL JAAIVD010000011;XM_032887790 XP_032743681 target of Myb protein 1 protein-coding 625857941 LOC116892767 olfactory receptor 10A3-like 2 182574427 182575384 + 116892767 MODEL JAAIVD010000001 pseudo 625857942 Pcnp PEST proteolytic signal containing nuclear protein INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 40148269 40162306 - 22301074;30032202 116898901 MODEL JAAIVD010000003;XM_032900299;XM_032900300;XM_032900301;XM_032900302 XP_032756190;XP_032756191;XP_032756192;XP_032756193 PEST proteolytic signal-containing nuclear protein protein-coding 625857959 Tmem88 transmembrane protein 88 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein stabilization (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 49008747 49010488 - 30032202 116910605 MODEL JAAIVD010000002;XM_032914547 XP_032770438 protein-coding 625857965 LOC116883619 heat shock cognate 71 kDa protein-like 14 20257178 20259159 - 116883619 MODEL JAAIVD010000009 pseudo 625857966 Nsun7 NOP2/Sun RNA methyltransferase family member 7 INVOLVED IN flagellated sperm motility (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH male infertility (ortholog) 11 23363076 23420160 + 22301074 116912896 MODEL JAAIVD010000006;XM_032917154 XP_032773045 putative methyltransferase NSUN7 protein-coding 625857983 LOC116912419 eukaryotic translation initiation factor 3 subunit C-like 11 585680 588691 + 22301074;30032202 116912419 MODEL JAAIVD010000006;XM_032916485 XP_032772376 protein-coding 625857988 Lman2 lectin, mannose binding 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); D-mannose binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN positive regulation of phagocytosis (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cell surface (ortholog); COPI-coated vesicle (ortholog); cytoplasmic vesicle (ortholog) 14 73667447 73685401 - 30032202 116883332 MODEL JAAIVD010000009;XM_032884403 XP_032740294 vesicular integral-membrane protein VIP36 protein-coding 625858000 Tnik TRAF2 and NCK interacting kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); autosomal recessive intellectual developmental disorder 54 (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 3 126006757 126399096 - 22301074 116896986 MODEL JAAIVD010000012;XM_032898578 XP_032754469 TRAF2 and NCK-interacting protein kinase protein-coding 625858037 LOC116907139 C-type lectin domain family 4 member A 8 10994162 11010863 - 116907139 MODEL JAAIVD010000027;XM_032910109;XM_032910110 XP_032766000;XP_032766001 protein-coding 625858053 Tm6sf2 transmembrane 6 superfamily member 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of lipid metabolic process (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); myocardial infarction (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 13 12339327 12347055 + 30032202 116914853 MODEL JAAIVD010000008;XM_032919303 XP_032775194 protein-coding 625858067 LOC116914110 small nucleolar RNA SNORA51 12 90475016 90475128 + 116914110 MODEL JAAIVD010000007 pseudo 625858068 LOC116893239 60S ribosomal protein L36-like 2 124674255 124674610 + 116893239 MODEL JAAIVD010000001 pseudo 625858069 LOC116905025 uncharacterized LOC116905025 7 64202061 64204221 - 116905025 MODEL JAAIVD010000026;XR_004388479 ncrna 625858073 LOC116895017 small nucleolar RNA SNORA48 2 2647562 2647696 - 116895017 MODEL JAAIVD010000001 pseudo 625858074 LOC116900129 olfactory receptor 50 5 14501509 14502447 + 22301074;30032202 116900129 MODEL JAAIVD010000023;XM_032901903 XP_032757794 protein-coding 625858077 LOC116914502 arylamine N-acetyltransferase 1 13 21860069 21874624 - 22301074;30032202 116914502 MODEL JAAIVD010000008;XM_032918819;XM_032918821;XM_032918822;XM_032918823 XP_032774710;XP_032774712;XP_032774713;XP_032774714 protein-coding 625858092 Pomgnt2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN neuron migration (ortholog); protein O-linked glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A8 (ortholog); exotropia (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 113141940 113157748 - 22301074;30032202 116907989 MODEL JAAIVD010000027;XM_032911235;XM_032911236 XP_032767126;XP_032767127 protein O-linked-mannose beta-1,4-N-acetylglucosaminyltransferase 2 protein-coding 625858100 LOC116915024 tubulin alpha-1B chain-like 13 229997 231503 + 116915024 MODEL JAAIVD010000008;XR_004389790 pseudo 625858103 LOC116884707 luc7-like protein 3 15 64528094 64529329 - 116884707 MODEL JAAIVD010000010 pseudo 625858104 LOC116888306 ubiquitin-40S ribosomal protein S27a-like X 31725282 31725752 - 22301074;30032202 116888306 MODEL JAAIVD010000014;XM_032889579 XP_032745470 protein-coding 625858107 LOC116904547 killer cell lectin-like receptor 4 6 17298250 17317563 - 116904547 MODEL JAAIVD010000024;XM_032907341;XM_032907342;XM_032907343;XM_032907344 XP_032763232;XP_032763233;XP_032763234;XP_032763235 protein-coding 625858124 Chad chondroadherin INVOLVED IN bone development (ortholog); cartilage condensation (ortholog); negative regulation of bone trabecula formation (ortholog) 9 50974939 50978790 - 22301074;30032202 116909284 MODEL JAAIVD010000002;XM_032912821 XP_032768712 protein-coding 625858132 LOC116883718 NUT family member 2-like 14 69164715 69172124 - 116883718 MODEL JAAIVD010000009;XM_032884943 XP_032740834 protein-coding 625858141 LOC116912509 60S ribosomal protein L19-like 11 98517395 98517998 - 116912509 MODEL JAAIVD010000006 pseudo 625858142 Mapk8ip2 mitogen-activated protein kinase 8 interacting protein 2 ENCODES a protein that exhibits kinesin binding (ortholog); MAP-kinase scaffold activity (ortholog); protein kinase activator activity (ortholog); INVOLVED IN behavioral fear response (ortholog); dendrite morphogenesis (ortholog); JNK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog) 1 258759019 258769603 + 22301074;30032202 116915188 MODEL JAAIVD010000025;XM_032919570 XP_032775461 C-Jun-amino-terminal kinase-interacting protein 2 protein-coding 625858158 LOC116914576 ATP synthase subunit d, mitochondrial-like 13 44055144 44055662 - 22301074;30032202 116914576 MODEL JAAIVD010000008;XM_032918935 XP_032774826 protein-coding 625858162 Tubgcp2 tubulin gamma complex component 2 INVOLVED IN brain development (ortholog); neuron migration (ortholog); ASSOCIATED WITH pachygyria, microcephaly, developmental delay, and dysmorphic facies, with or without seizures (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); microtubule organizing center (ortholog) 2 61834632 61860243 + 22301074;30032202 116891354 MODEL JAAIVD010000001;XM_032892347;XM_032892348;XM_032892349 XP_032748238;XP_032748239;XP_032748240 gamma-tubulin complex component 2;tubulin gamma complex associated protein 2 protein-coding 625858190 LOC116887702 class I histocompatibility antigen, Gogo-A*0501 alpha chain-like 18 9688926 9690855 - 30032202 116887702 MODEL JAAIVD010000013;XM_032889300 XP_032745191 protein-coding 625858198 LOC116893212 phosphoglycerate kinase 1-like 2 112210310 112243818 + 116893212 MODEL JAAIVD010000001 pseudo 625858199 Mmachc metabolism of cobalamin associated C ENCODES a protein that exhibits cyanocobalamin reductase (cyanide-eliminating) (NADP+) activity (ortholog); demethylase activity (ortholog); FAD binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); demethylation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 40339969 40346059 - 30032202 116898456 MODEL JAAIVD010000025;XM_032899716 XP_032755607 methylmalonic aciduria and homocystinuria type C protein protein-coding 625858207 LOC116902637 small nucleolar RNA U13 5 95070967 95071076 + 116902637 MODEL JAAIVD010000023;XR_004388214 snorna 625858210 Acad8 acyl-CoA dehydrogenase family member 8 PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); Isobutyryl-CoA Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 8 22869360 22893140 - 22301074 116906962 MODEL JAAIVD010000027;XM_032909883 XP_032765774 isobutyryl-CoA dehydrogenase, mitochondrial protein-coding 625858225 Use1 unconventional SNARE in the ER 1 INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); SNARE complex (ortholog) 13 13631808 13634454 - 30032202 116915100 MODEL JAAIVD010000008;XM_032919528;XM_032919529 XP_032775419;XP_032775420 vesicle transport protein USE1 protein-coding 625858239 LOC116903774 uncharacterized LOC116903774 6 15999255 16006806 + 116903774 MODEL JAAIVD010000024;XM_032906464 XP_032762355 uncharacterized protein LOC116903774 protein-coding 625858247 LOC116888395 uncharacterized LOC116888395 X 39000836 39003093 + 30032202 116888395 MODEL JAAIVD010000014;XM_032889669 XP_032745560 uncharacterized protein LOC116888395 protein-coding 625858251 Ppfibp1 PPFIB scaffold protein 1 INVOLVED IN cortical microtubule organization (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Neurodevelopmental Disorder with Seizures, Microcephaly, and Brain Abnormalities (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog) 6 4561125 4700446 + 22301074;30032202 116903098 MODEL JAAIVD010000024;XM_032905420;XM_032905421 XP_032761311;XP_032761312 PPFIA binding protein 1;liprin-beta-1 protein-coding 625858290 LOC116890965 density-regulated protein 2 10112689 10113469 + 22301074;30032202 116890965 MODEL JAAIVD010000001;XM_032891626 XP_032747517 protein-coding 625858295 Rnf40 ring finger protein 40 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); protein homodimerization activity (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of protein polyubiquitination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH nephrogenic diabetes insipidus (ortholog); FOUND IN HULC complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 74296679 74312025 - 22301074;30032202 116891465 MODEL JAAIVD010000001;XM_032892555;XM_032892556 XP_032748446;XP_032748447 E3 ubiquitin-protein ligase BRE1B protein-coding 625858321 Kcnj13 potassium inwardly rectifying channel subfamily J member 13 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Leber congenital amaurosis 16 (ortholog); snowflake vitreoretinal degeneration (ortholog); FOUND IN plasma membrane (ortholog) 4 159518435 159526557 - 22301074;30032202 116899605 MODEL JAAIVD010000003;XM_032901561 XP_032757452 inward rectifier potassium channel 13 protein-coding 625858328 Tp53i3 tumor protein p53 inducible protein 3 ENCODES a protein that exhibits NADPH binding (ortholog); protein homodimerization activity (ortholog); quinone binding (ortholog); INVOLVED IN NADP+ metabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autism spectrum disorder (ortholog); carcinoma (ortholog) 7 25448953 25460752 + 30032202 116905638 MODEL JAAIVD010000026;XM_032908616 XP_032764507 quinone oxidoreductase PIG3 protein-coding 625858338 LOC116894466 galectin-7 2 167138459 167141586 - 22301074 116894466 MODEL JAAIVD010000001;XM_032896177 XP_032752068 protein-coding 625858347 Cyrib CYFIP related Rac1 interactor B ENCODES a protein that exhibits MHC class Ib protein binding, via antigen binding groove (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cilium (ortholog); mitochondrion (ortholog) 1 238158043 238284855 - 22301074;30032202 116912101 MODEL JAAIVD010000025;XM_032916001;XM_032916009;XM_032916017;XM_032916024;XM_032916032;XM_032916039;XM_032916048 XP_032771892;XP_032771900;XP_032771908;XP_032771915;XP_032771923;XP_032771930;XP_032771939 protein FAM49B protein-coding 625858379 LOC116904825 U6 spliceosomal RNA 6 34917499 34917603 - 116904825 MODEL JAAIVD010000024;XR_004388474 snrna 625858382 Nln neurolysin ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); oligopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); protein catabolic process (ortholog); regulation of gluconeogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 3 193258751 193350025 + 22301074;30032202 116897234 MODEL JAAIVD010000012;XM_032898958 XP_032754849 neurolysin, mitochondrial protein-coding 625858399 LOC116893480 zinc finger protein 665-like 2 180772910 180773639 - 116893480 MODEL JAAIVD010000001 pseudo 625858400 LOC116889510 small nucleolar RNA SNORA17 X 93227228 93227354 - 116889510 MODEL JAAIVD010000014;XR_004386455 snorna 625858403 Cnmd chondromodulin INVOLVED IN endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell proliferation (ortholog) 12 44683146 44708184 + 30032202 116913443 MODEL JAAIVD010000007;XM_032917642;XM_032917643 XP_032773533;XP_032773534 leukocyte cell-derived chemotaxin 1 protein-coding 625858418 Tbx22 T-box transcription factor 22 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Abruzzo-Erickson syndrome (ortholog); cleft palate (ortholog); Cleft Palate with Ankyloglossia (ortholog); FOUND IN nucleus (ortholog) X 61303568 61321752 - 22301074;30032202 116888949 MODEL JAAIVD010000014;XM_032890179;XM_032890181 XP_032746070;XP_032746072 T-box transcription factor TBX22 protein-coding 625858432 Kcnk4 potassium two pore domain channel subfamily K member 4 ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to alkaline pH (ortholog); cellular response to arachidonate (ortholog); ASSOCIATED WITH Facial Dysmorphism, Hypertrichosis, Epilepsy, Intellectual/Developmental Delay, and Gingival Overgrowth Syndrome (ortholog); FOUND IN node of Ranvier (ortholog); plasma membrane (ortholog); potassium channel complex (ortholog) 2 860319 868810 + 22301074;30032202 116894817 MODEL JAAIVD010000001;XM_032896487;XM_032896488;XM_032896489;XM_032896490 XP_032752378;XP_032752379;XP_032752380;XP_032752381 potassium channel subfamily K member 4 protein-coding 625858451 LOC116908410 small nucleolar RNA SNORA17 8 64514388 64514518 - 116908410 MODEL JAAIVD010000027;XR_004388952 snorna 625858454 Inmt indolethylamine N-methyltransferase ENCODES a protein that exhibits amine N-methyltransferase activity (ortholog); thioether S-methyltransferase activity (ortholog); INVOLVED IN amine metabolic process (ortholog); methylation (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog) 6 85888502 85892824 + 30032202 116902823 MODEL JAAIVD010000024;XM_032905153 XP_032761044 protein-coding 625858461 Ap1g2 adaptor related protein complex 1 subunit gamma 2 FOUND IN Golgi-associated vesicle (ortholog); membrane (ortholog); synapse (ortholog) 12 69891761 69899337 + 22301074;30032202 116913498 MODEL JAAIVD010000007;XM_032917699;XM_032917700 XP_032773590;XP_032773591 AP-1 complex subunit gamma-like 2 protein-coding 625858490 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48629546 48629627 + 116910797 MODEL JAAIVD010000002 trna 625858491 Trim9 tripartite motif containing 9 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); SNARE binding (ortholog); INVOLVED IN negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of dense core granule exocytosis (ortholog); negative regulation of SNARE complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) 7 83924177 84023634 - 22301074 116905132 MODEL JAAIVD010000026;XM_032907883;XM_032907884;XM_032907885;XM_032907886;XM_032907888;XM_032907889;XM_032907890;XM_032907891;XM_032907892;XM_032907893 XP_032763774;XP_032763775;XP_032763776;XP_032763777;XP_032763779;XP_032763780;XP_032763781;XP_032763782;XP_032763783;XP_032763784 E3 ubiquitin-protein ligase TRIM9 protein-coding 625858527 LOC116911075 60S ribosomal protein L5-like 10 32613493 32614225 - 116911075 MODEL JAAIVD010000005 pseudo 625858528 LOC116890526 small nucleolar RNA SNORA17 1 149493704 149493831 - 116890526 MODEL JAAIVD010000025;XR_004386708 snorna 625858531 LOC116910658 small nucleolar RNA SNORA70 9 2571313 2571448 + 116910658 MODEL JAAIVD010000002;XR_004389192 snorna 625858534 Dnttip2 deoxynucleotidyltransferase terminal interacting protein 2 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 37562678 37573841 - 30032202 116896299 MODEL JAAIVD010000012;XM_032897386 XP_032753277 deoxynucleotidyltransferase terminal-interacting protein 2 protein-coding 625858545 LOC116913817 olfactory receptor 10G2-like 12 71501735 71502683 + 116913817 MODEL JAAIVD010000007 pseudo 625858546 Hspa14 heat shock protein family A (Hsp70) member 14 ASSOCIATED WITH mouth disease (ortholog); FOUND IN cytosol (ortholog); ribosome (ortholog) 14 9935360 9956169 - 22301074;30032202 116883413 MODEL JAAIVD010000009;XM_032884540;XM_032884541 XP_032740431;XP_032740432 heat shock 70 kDa protein 14 protein-coding 625858566 Lama4 laminin subunit alpha 4 INVOLVED IN blood vessel development (ortholog); brown fat cell differentiation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); Brugada syndrome (ortholog); Brugada syndrome 9 (ortholog); FOUND IN basement membrane (ortholog); neuromuscular junction (ortholog); synaptic cleft (ortholog) 18 38783750 38925963 + 22301074 116887175 MODEL JAAIVD010000013;XM_032888727 XP_032744618 laminin subunit alpha-4 protein-coding 625858608 Oprl1 opioid related nociceptin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); nociceptin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); behavioral response to cocaine (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Anorexia (ortholog); FOUND IN plasma membrane (ortholog); synaptic membrane (ortholog) 5 158816461 158822804 + 22301074;30032202 116902455 MODEL JAAIVD010000023;XM_032905019;XM_032905020;XM_032905021;XM_032905022;XM_032905023 XP_032760910;XP_032760911;XP_032760912;XP_032760913;XP_032760914 nociceptin receptor protein-coding 625858631 LOC116891277 heat shock cognate 71 kDa protein-like 2 49239514 49241461 - 116891277 MODEL JAAIVD010000001 pseudo 625858632 Tspyl2 TSPY like 2 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA replication (ortholog); regulation of protein kinase activity (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) X 13483119 13488978 - 22301074;30032202 116888345 MODEL JAAIVD010000014;XM_032889616 XP_032745507 testis-specific Y-encoded-like protein 2 protein-coding 625858643 LOC116887091 sorting nexin-3 18 42173536 42206390 + 30032202 116887091 MODEL JAAIVD010000013;XM_032888602 XP_032744493 protein-coding 625858651 Tmprss11b transmembrane serine protease 11B ENCODES a protein that exhibits serine-type peptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 11 279966 293486 + 22301074 116911928 MODEL JAAIVD010000006;XM_032915819 XP_032771710 transmembrane protease serine 11B protein-coding 625858663 LOC116888105 SIN3-HDAC complex-associated factor-like X 99143336 99252991 + 116888105 MODEL JAAIVD010000014 pseudo 625858664 Pfkl phosphofructokinase, liver type ENCODES a protein that exhibits 6-phosphofructokinase activity (ortholog); ATP binding (ortholog); fructose binding (ortholog); INVOLVED IN fructose 1,6-bisphosphate metabolic process (ortholog); fructose 6-phosphate metabolic process (ortholog); glycolytic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; glycolysis pathway; ASSOCIATED WITH hemolytic anemia (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); cytosol (ortholog) 18 1278332 1300763 - 22301074;30032202 116887137 MODEL JAAIVD010000013;XM_032888686 XP_032744577 ATP-dependent 6-phosphofructokinase, liver type protein-coding 625858690 LOC116898937 interferon-induced GTP-binding protein Mx2-like 4 47011656 47032921 - 22301074;30032202 116898937 MODEL JAAIVD010000003;XM_032900352 XP_032756243 protein-coding 625858707 Rbmx RNA binding motif protein X-linked ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); membrane protein ectodomain proteolysis (ortholog); mRNA splice site recognition (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); Spinal Cord Injuries (ortholog); syndromic X-linked intellectual disability Shashi type (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); euchromatin (ortholog); extracellular exosome (ortholog) X 117822539 117829168 - 22301074;30032202 116888834 MODEL JAAIVD010000014;XM_032890108 XP_032745999 RNA-binding motif protein, X chromosome protein-coding 625858720 Scgb2a2 secretoglobin family 2A member 2 2 151543232 151545970 + 30032202 116892082 MODEL JAAIVD010000001;XM_032893556 XP_032749447 mammaglobin-A protein-coding 625858727 LOC116906306 U6 spliceosomal RNA 7 86705851 86705957 + 116906306 MODEL JAAIVD010000026;XR_004388594 snrna 625858730 Ypel4 yippee like 4 INVOLVED IN negative regulation of erythrocyte clearance (ortholog); negative regulation of erythrocyte differentiation (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 62113712 62118252 + 116901587 MODEL JAAIVD010000023;XM_032903603 XP_032759494 protein yippee-like 4 protein-coding 625858739 LOC116912079 glyceraldehyde-3-phosphate dehydrogenase-like 1 167715468 167727129 - 116912079 MODEL JAAIVD010000025 pseudo 625858740 Haspin histone H3 associated protein kinase ENCODES a protein that exhibits ATP binding (ortholog); DNA binding (ortholog); histone H3T3 kinase activity (ortholog); INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); gene expression (ortholog); homologous chromosome segregation (ortholog); FOUND IN centrosome (ortholog); male germ cell nucleus (ortholog); nucleoplasm (ortholog) 9 42374467 42377262 + 22301074;30032202 116909762 MODEL JAAIVD010000002;XM_032913448 XP_032769339 serine/threonine-protein kinase haspin protein-coding 625858745 LOC116910693 small nucleolar RNA SNORA55 9 89142077 89142194 + 116910693 MODEL JAAIVD010000002;XR_004389222 snorna 625858748 LOC116887836 60S ribosomal protein L18-like X 37678311 37680023 + 116887836 MODEL JAAIVD010000014 pseudo 625858749 Slc7a1 solute carrier family 7 member 1 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); L-amino acid transport (ortholog); L-arginine import across plasma membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 16 5491669 5523242 + 22301074;30032202 116885276 MODEL JAAIVD010000004;XM_032886507 XP_032742398 high affinity cationic amino acid transporter 1 protein-coding 625858765 LOC116903832 protein tyrosine phosphatase type IVA 1 6 91552621 91554284 - 22301074;30032202 116903832 MODEL JAAIVD010000024;XM_032906544 XP_032762435 protein-coding 625858770 Galr2 galanin receptor 2 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); galanin-activated signaling pathway (ortholog); ASSOCIATED WITH depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN cilium (ortholog) 9 67786885 67789747 - 22301074;30032202 116908695 MODEL JAAIVD010000002;XM_032912014 XP_032767905 galanin receptor type 2 protein-coding 625858776 LOC116897768 olfactory receptor Olfr180-like 4 1945366 1946292 + 22301074;30032202 116897768 MODEL JAAIVD010000003;XM_032899198 XP_032755089 protein-coding 625858779 Arhgap42 Rho GTPase activating protein 42 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of Rho protein signal transduction (ortholog); negative regulation of systemic arterial blood pressure (ortholog) 8 4780434 5005059 + 22301074;30032202 116906593 MODEL JAAIVD010000027;XM_032909333 XP_032765224 rho GTPase-activating protein 42 protein-coding 625858807 Pdcd4 programmed cell death 4 INVOLVED IN BMP signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Arterial Injury (ortholog); Lung Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 53344434 53367464 + 30032202 116891288 MODEL JAAIVD010000001;XM_032892192;XM_032892193;XR_004386826 XP_032748083;XP_032748084 programmed cell death protein 4 protein-coding 625858829 Scn4b sodium voltage-gated channel beta subunit 4 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN AV node cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Atrial Fibrillation 17 (ortholog); long QT syndrome (ortholog); FOUND IN intercalated disc (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 8 39672844 39685184 + 30032202 116907560 MODEL JAAIVD010000027;XM_032910583 XP_032766474 sodium channel subunit beta-4 protein-coding 625858838 Pgbd1 piggyBac transposable element derived 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH schizophrenia (ortholog) 14 41020551 41047491 + 30032202 116883204 MODEL JAAIVD010000009;XM_032884231 XP_032740122 piggyBac transposable element-derived protein 1 protein-coding 625858848 LOC116909551 olfactory receptor 10-like 9 32067408 32068354 + 22301074 116909551 MODEL JAAIVD010000002;XM_032913167 XP_032769058 protein-coding 625858852 LOC116887658 cadherin-23-like 18 26130611 26144282 - 22301074 116887658 MODEL JAAIVD010000013;XM_032889258 XP_032745149 protein-coding 625858869 LOC116883391 aldo-keto reductase family 1 member C3 homolog 14 18590303 18607431 - 30032202 116883391 MODEL JAAIVD010000009;XM_032884511;XM_032884512;XM_032884514 XP_032740402;XP_032740403;XP_032740405 protein-coding 625858885 LOC116903871 zinc finger protein 212-like 6 92954959 92967158 - 22301074 116903871 MODEL JAAIVD010000024;XM_032906623;XM_032906624 XP_032762514;XP_032762515 protein-coding 625858896 Myom2 myomesin 2 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); sarcomere organization (ortholog); ASSOCIATED WITH Contracture (ortholog); FOUND IN M band (ortholog) 13 68695237 68764803 - 22301074 116914825 MODEL JAAIVD010000008;XM_032919280 XP_032775171 myomesin-2 protein-coding 625858937 Serinc2 serine incorporator 2 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine metabolic process (ortholog); plasma membrane phospholipid scrambling (ortholog); FOUND IN plasma membrane (ortholog) 1 27884165 27906064 + 22301074;30032202 116895967 MODEL JAAIVD010000025;XM_032897013 XP_032752904 protein-coding 625858951 Hs6st3 heparan sulfate 6-O-sulfotransferase 3 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 12 6353571 6735515 - 22301074;30032202 116913672 MODEL JAAIVD010000007;XM_032917959 XP_032773850 heparan-sulfate 6-O-sulfotransferase 3 protein-coding 625858957 Ecm2 extracellular matrix protein 2 ENCODES a protein that exhibits collagen binding (ortholog); collagen V binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 14 68478758 68512615 + 22301074;30032202 116915220 MODEL JAAIVD010000009;XM_032919608 XP_032775499 protein-coding 625858971 LOC116902693 olfactory receptor 9A4-like 6 41396375 41397319 + 22301074 116902693 MODEL JAAIVD010000024;XM_032905048 XP_032760939 protein-coding 625858974 LOC116900483 olfactory receptor 4C3-like 5 71630934 71631860 - 22301074 116900483 MODEL JAAIVD010000023;XM_032902218 XP_032758109 protein-coding 625858977 Hoxa13 homeobox A13 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); artery morphogenesis (ortholog); ASSOCIATED WITH Anorectal Malformations (ortholog); Congenital Hand Deformities (ortholog); Female Urogenital Diseases (ortholog); FOUND IN chromosome (ortholog); intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog) 6 88801731 88804856 + 22301074;30032202 116903797 MODEL JAAIVD010000024;XM_032906489 XP_032762380 homeobox protein Hox-A13 protein-coding 625858983 LOC116887322 glutathione S-transferase theta-2 18 11608876 11612203 + 30032202 116887322 MODEL JAAIVD010000013;XM_032888916 XP_032744807 protein-coding 625858992 LOC116906736 low molecular weight phosphotyrosine protein phosphatase 8 61145982 61147369 + 22301074 116906736 MODEL JAAIVD010000027;XM_032909558 XP_032765449 protein-coding 625858997 LOC116883502 olfactory receptor 2W3-like 14 41196526 41203742 - 22301074 116883502 MODEL JAAIVD010000009;XM_032884670;XM_032884671 XP_032740561;XP_032740562 protein-coding 625859004 Snx21 sorting nexin family member 21 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); FOUND IN early endosome membrane (ortholog) 5 153163817 153172084 - 22301074;30032202 116902352 MODEL JAAIVD010000023;XM_032904836;XM_032904837 XP_032760727;XP_032760728 sorting nexin-21 protein-coding 625859014 LOC116900548 olfactory receptor 4F17-like 5 89780432 89781370 + 22301074 116900548 MODEL JAAIVD010000023;XM_032902274 XP_032758165 protein-coding 625859017 Cep76 centrosomal protein 76 INVOLVED IN regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 15 63636905 63664584 + 116884793 MODEL JAAIVD010000010;XM_032886028 XP_032741919 centrosomal protein of 76 kDa protein-coding 625859033 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92610087 92610158 + 116904850 MODEL JAAIVD010000024 trna 625859034 LOC116896095 glutathione S-transferase kappa 1-like 3 222229042 222236670 - 116896095 MODEL JAAIVD010000012 pseudo 625859035 Mrpl28 mitochondrial ribosomal protein L28 ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog) 9 3387889 3390802 + 22301074;30032202 116908802 MODEL JAAIVD010000002;XM_032912204 XP_032768095 39S ribosomal protein L28, mitochondrial protein-coding 625859044 Gpr3 G protein-coupled receptor 3 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway coupled to cGMP nucleotide second messenger (ortholog); negative regulation of cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) 1 25038865 25042417 + 22301074 116895273 MODEL JAAIVD010000025;XM_032896593 XP_032752484 G-protein coupled receptor 3 protein-coding 625859050 Pus7l pseudouridine synthase 7 like ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog) 1 267406471 267425761 - 22301074;30032202 116884316 MODEL JAAIVD010000025;XM_032885429 XP_032741320 pseudouridylate synthase 7 homolog-like protein protein-coding 625859062 LOC116888071 splicing factor, proline- and glutamine-rich-like X 89166145 89169397 + 116888071 MODEL JAAIVD010000014 pseudo 625859063 LOC116911523 uncharacterized LOC116911523 10 51302391 51305715 - 116911523 MODEL JAAIVD010000005;XR_004389328 ncrna 625859067 Erc1 ELKS/RAB6-interacting/CAST family member 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); small GTPase binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Macrocephaly, Dysmorphic Facies, and Psychomotor Retardation (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 6 26887633 27174363 + 30032202 116903339 MODEL JAAIVD010000024;XM_032905787;XM_032905788;XM_032905789;XM_032905790;XM_032905791;XM_032905792;XM_032905793;XM_032905794 XP_032761678;XP_032761679;XP_032761680;XP_032761681;XP_032761682;XP_032761683;XP_032761684;XP_032761685 protein-coding 625859103 LOC116912854 uncharacterized LOC116912854 11 72282889 72325230 - 116912854 MODEL JAAIVD010000006;XR_004389484 ncrna 625859108 LOC116895580 chromobox protein homolog 3-like 3 139256036 139256584 + 116895580 MODEL JAAIVD010000012 pseudo 625859109 LOC116899803 U7 small nuclear RNA 4 108891849 108891910 - 116899803 MODEL JAAIVD010000003;XR_004387805 snrna 625859112 Rps23 ribosomal protein S23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); maintenance of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH brachycephaly, trichomegaly, and developmental delay (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 3 205306966 205308580 - 22301074;30032202 116897307 MODEL JAAIVD010000012;XM_032899056 XP_032754947 40S ribosomal protein S23 protein-coding 625859120 LOC116888248 high mobility group protein B4-like X 108239662 108240207 + 116888248 MODEL JAAIVD010000014 pseudo 625859121 LOC116914069 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating-like 12 90125450 90126615 + 116914069 MODEL JAAIVD010000007 pseudo 625859122 C5ar1 complement C5a receptor 1 ENCODES a protein that exhibits complement component C5a binding (ortholog); complement component C5a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 2 172803089 172813257 + 22301074;30032202 116894500 MODEL JAAIVD010000001;XM_032896207 XP_032752098 C5a anaphylatoxin chemotactic receptor 1 protein-coding 625859128 Ercc6l2 ERCC excision repair 6 like 2 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bone marrow disease (ortholog); Bone Marrow Failure Syndrome 2 (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 14 75649339 75743684 - 22301074 116884037 MODEL JAAIVD010000009;XM_032885275;XM_032885276 XP_032741166;XP_032741167 DNA excision repair protein ERCC-6-like 2 protein-coding 625859155 LOC116912293 uncharacterized LOC116912293 11 12626934 12699369 + 116912293 MODEL JAAIVD010000006;XR_004389440 ncrna 625859159 LOC116894762 60S ribosomal protein L19-like 2 187593644 187594242 - 116894762 MODEL JAAIVD010000001 pseudo 625859160 Plxnb1 plexin B1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of osteoblast proliferation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) 8 100368722 100388642 + 22301074;30032202 116907640 MODEL JAAIVD010000027;XM_032910704 XP_032766595 plexin-B1 protein-coding 625859200 Kcnmb4 potassium calcium-activated channel subfamily M regulatory beta subunit 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 1 194570739 194625964 - 22301074;30032202 116909143 MODEL JAAIVD010000025;XM_032912632 XP_032768523 calcium-activated potassium channel subunit beta-4 protein-coding 625859207 LOC116891587 uncharacterized LOC116891587 2 81555576 81557846 - 116891587 MODEL JAAIVD010000001;XR_004386848 ncrna 625859212 LOC116894158 olfactory receptor 2AG1-like 2 104966675 104967622 + 22301074 116894158 MODEL JAAIVD010000001;XM_032895876 XP_032751767 protein-coding 625859215 LOC116894281 ribosome biogenesis protein BRX1 homolog 2 124747044 124748169 + 116894281 MODEL JAAIVD010000001 pseudo 625859216 Atp6v0e1 ATPase H+ transporting V0 subunit e1 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); response to amino acid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN proton-transporting V-type ATPase complex (ortholog) 9 4750734 4773340 - 22301074;30032202 116909896 MODEL JAAIVD010000002;XM_032913647 XP_032769538 V-type proton ATPase subunit e 1 protein-coding 625859224 LOC116894706 L-lactate dehydrogenase A chain-like 2 225028950 225029981 + 116894706 MODEL JAAIVD010000001 pseudo 625859225 LOC116890282 uncharacterized LOC116890282 1 21949641 21950713 + 116890282 MODEL JAAIVD010000025;XM_032890995 XP_032746886 uncharacterized protein LOC116890282 protein-coding 625859231 Krt23 keratin 23 9 54305266 54321717 - 22301074;30032202 116909272 MODEL JAAIVD010000002;XM_032912800 XP_032768691 keratin, type I cytoskeletal 23 protein-coding 625859243 Mocs3 molybdenum cofactor synthesis 3 ENCODES a protein that exhibits molybdopterin-synthase sulfurtransferase activity (ortholog); nucleotidyltransferase activity (ortholog); sulfurtransferase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (ortholog); tRNA thio-modification (ortholog); tRNA wobble uridine modification (ortholog); PARTICIPATES IN molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH Hydrops Fetalis (ortholog); FOUND IN cytosol (ortholog) 5 149777274 149779704 - 22301074;30032202 116902301 MODEL JAAIVD010000023;XM_032904745 XP_032760636 adenylyltransferase and sulfurtransferase MOCS3 protein-coding 625859248 LOC116885277 uncharacterized LOC116885277 16 5523672 5526287 + 116885277 MODEL JAAIVD010000004;XR_004386000 ncrna 625859252 LOC116893330 kallikrein-15-like 2 155377051 155385415 - 116893330 MODEL JAAIVD010000001 pseudo 625859253 LOC116908069 60S ribosomal protein L7a-like 8 64964843 64965936 - 116908069 MODEL JAAIVD010000027 pseudo 625859254 Map2k1 mitogen-activated protein kinase kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); cell motility (ortholog); cellular senescence (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH arteriovenous malformation (ortholog); autism spectrum disorder (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); ciliary basal body (ortholog) 8 58490586 58560952 - 22301074 116906565 MODEL JAAIVD010000027;XM_032909280;XM_032909282 XP_032765171;XP_032765173 dual specificity mitogen-activated protein kinase kinase 1 protein-coding 625859274 LOC116904776 small nucleolar RNA SNORA17 6 37748991 37749101 + 116904776 MODEL JAAIVD010000024 pseudo 625859275 LOC116900849 ADP/ATP translocase 2-like 5 61561844 61562763 + 116900849 MODEL JAAIVD010000023 pseudo 625859276 LOC116897504 small nucleolar RNA SNORA25 3 190492994 190493122 - 116897504 MODEL JAAIVD010000012;XR_004387524 snorna 625859279 Cracd capping protein inhibiting regulator of actin dynamics INVOLVED IN epithelial structure maintenance (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of barbed-end actin filament capping (ortholog) 11 33595740 33624139 + 30032202 116911961 MODEL JAAIVD010000006;XM_032915881;XM_032915882;XM_032915884;XM_032915885;XM_032915886 XP_032771772;XP_032771773;XP_032771775;XP_032771776;XP_032771777 cancer-related regulator of actin dynamics protein-coding 625859303 LOC116889170 alpha-enolase-like X 94648004 94649658 + 22301074;30032202 116889170 MODEL JAAIVD010000014;XM_032890337;XM_032890338 XP_032746228;XP_032746229 protein-coding 625859311 Mapre2 microtubule associated protein RP/EB family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN positive regulation of ARF protein signal transduction (ortholog); positive regulation of focal adhesion disassembly (ortholog); positive regulation of keratinocyte migration (ortholog); ASSOCIATED WITH congenital symmetric circumferential skin creases 2 (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN focal adhesion (ortholog); microtubule cytoskeleton (ortholog) 15 19934061 20076091 - 30032202 116884828 MODEL JAAIVD010000010;XM_032886066;XM_032886067;XM_032886068 XP_032741957;XP_032741958;XP_032741959 microtubule-associated protein RP/EB family member 2 protein-coding 625859329 LOC116893303 ubiquitin domain-containing protein 2-like 2 151387234 151388242 - 116893303 MODEL JAAIVD010000001 pseudo 625859330 LOC116901914 uncharacterized LOC116901914 5 104304350 104309654 - 116901914 MODEL JAAIVD010000023;XR_004388030 ncrna 625859336 Arhgap15 Rho GTPase activating protein 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cell shape (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 5 21444223 22062143 + 22301074;30032202 116901383 MODEL JAAIVD010000023;XM_032903250 XP_032759141 rho GTPase-activating protein 15 protein-coding 625859354 LOC116888749 uncharacterized LOC116888749 X 18955809 18965870 - 116888749 MODEL JAAIVD010000014;XR_004386339 ncrna 625859359 Klhdc7b kelch domain containing 7B 1 258684251 258688054 + 22301074 116890174 MODEL JAAIVD010000025;XM_032890908 XP_032746799 kelch domain-containing protein 7B protein-coding 625859362 Wdr49 WD repeat domain 49 ASSOCIATED WITH prostate cancer (ortholog) 3 78410306 78592480 + 22301074 116895833 MODEL JAAIVD010000012;XM_032896953 XP_032752844 WD repeat-containing protein 49 protein-coding 625859382 Cfd complement factor D ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN complement activation, alternative pathway (ortholog); Notch signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); arthus reaction (ortholog); asbestosis (ortholog); FOUND IN extracellular space (ortholog) 1 154980418 154982310 - 22301074 116889865 MODEL JAAIVD010000025;XM_032890690 XP_032746581 protein-coding 625859391 LOC116900444 olfactory receptor 4C15-like 5 70881395 70882333 - 22301074 116900444 MODEL JAAIVD010000023;XM_032902184 XP_032758075 protein-coding 625859395 Nabp1 nucleic acid binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 123962621 123970047 + 30032202 116899377 MODEL JAAIVD010000003;XM_032901092;XM_032901093;XM_032901094 XP_032756983;XP_032756984;XP_032756985 SOSS complex subunit B2 protein-coding 625859411 LOC116884885 60S ribosomal protein L31-like 15 40905556 40906038 - 116884885 MODEL JAAIVD010000010 pseudo 625859412 LOC116900094 odorant-binding protein 2a-like 5 11489737 11493070 - 30032202 116900094 MODEL JAAIVD010000023;XM_032901872 XP_032757763 protein-coding 625859423 LOC116901060 cytochrome c oxidase assembly factor 6 homolog 5 142178017 142178253 + 116901060 MODEL JAAIVD010000023 pseudo 625859424 Dgkz diacylglycerol kinase zeta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); enzyme inhibitor activity (ortholog); kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Hypoxia (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 5 66077198 66118831 - 22301074;30032202 116901634 MODEL JAAIVD010000023;XM_032903720;XM_032903721;XM_032903722;XM_032903723 XP_032759611;XP_032759612;XP_032759613;XP_032759614 protein-coding 625859468 Hars1 histidyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); histidine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN histidyl-tRNA aminoacylation (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH autoimmune disease (ortholog); cerebellar ataxia (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytosol (ortholog) 15 7597631 7614029 + 22301074;30032202 116884286 MODEL JAAIVD010000010;XM_032885382 XP_032741273 histidine--tRNA ligase, cytoplasmic protein-coding 625859485 LOC116889328 60S ribosomal protein L7a-like 1 132232810 132233620 + 116889328 MODEL JAAIVD010000025 pseudo 625859486 Man1c1 mannosidase alpha class 1C member 1 1 23550737 23689709 + 22301074;30032202 116894672 MODEL JAAIVD010000025;XM_032896378 XP_032752269 mannosyl-oligosaccharide 1,2-alpha-mannosidase IC protein-coding 625859502 LOC116893980 40S ribosomal protein S2-like 2 101297580 101298446 - 116893980 MODEL JAAIVD010000001 pseudo 625859503 LOC116886608 zinc finger CCCH-type antiviral protein 1-like 17 12999729 13001381 + 116886608 MODEL JAAIVD010000011 pseudo 625859504 LOC116902355 eppin 5 153376904 153391422 + 22301074;30032202 116902355 MODEL JAAIVD010000023;XM_032904841;XM_032904842;XM_032904843 XP_032760732;XP_032760733;XP_032760734 WAP four-disulfide core domain protein 6A protein-coding 625859520 LOC116888338 claudin-34-like X 78268599 78269252 + 30032202 116888338 MODEL JAAIVD010000014;XM_032889608 XP_032745499 protein-coding 625859524 Tbc1d24 TBC1 domain family member 24 INVOLVED IN axon development (ortholog); cellular response to oxidative stress (ortholog); dendrite development (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nonsyndromic deafness 65 (ortholog); autosomal recessive nonsyndromic deafness 86 (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 9 1477395 1482669 - 116908693 MODEL JAAIVD010000002;XM_032912011;XM_032912012 XP_032767902;XP_032767903 protein-coding 625859538 LOC116913988 olfactory receptor 6S1 12 72242337 72243539 + 22301074;30032202 116913988 MODEL JAAIVD010000007;XM_032918263 XP_032774154 protein-coding 625859542 LOC116888281 rho GTPase-activating protein 6 X 27801833 27817112 - 30032202 116888281 MODEL JAAIVD010000014;XM_032889559;XM_032889560 XP_032745450;XP_032745451 protein-coding 625859556 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42527713 42527785 - 116884193 MODEL JAAIVD010000009 trna 625859557 Tdrd7 tudor domain containing 7 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN germ cell development (ortholog); lens fiber cell differentiation (ortholog); lens morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 36 (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); P granule (ortholog) 1 474551 538658 - 30032202 116890712 MODEL JAAIVD010000025;XM_032891157;XM_032891166;XM_032891175;XM_032891182 XP_032747048;XP_032747057;XP_032747066;XP_032747073 tudor domain-containing protein 7 protein-coding 625859586 Islr2 immunoglobulin superfamily containing leucine rich repeat 2 INVOLVED IN positive regulation of axon extension (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cell surface (ortholog) 8 52071626 52079704 - 22301074;30032202 116907206 MODEL JAAIVD010000027;XM_032910165;XM_032910166;XM_032910167;XM_032910168;XM_032910169;XM_032910170;XM_032910172;XM_032910173;XM_032910174;XM_032910175;XM_032910176 XP_032766056;XP_032766057;XP_032766058;XP_032766059;XP_032766060;XP_032766061;XP_032766063;XP_032766064;XP_032766065;XP_032766066;XP_032766067 immunoglobulin superfamily containing leucine-rich repeat protein 2 protein-coding 625859617 Slc35b4 solute carrier family 35 member B4 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); UDP-xylose transmembrane transporter activity (ortholog); INVOLVED IN regulation of gluconeogenesis (ortholog); UDP-N-acetylglucosamine transmembrane transport (ortholog); UDP-xylose transmembrane transport (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 105509053 105529538 + 22301074;30032202 116903982 MODEL JAAIVD010000024;XM_032906790 XP_032762681 UDP-xylose and UDP-N-acetylglucosamine transporter protein-coding 625859631 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 80879053 80879134 - 116895143 MODEL JAAIVD010000001 trna 625859632 LOC116891442 zinc finger protein 239-like 2 73699011 73700585 + 116891442 MODEL JAAIVD010000001;XM_032892506 XP_032748397 protein-coding 625859637 LOC116897574 small nucleolar RNA SNORA17 3 137081698 137081829 - 116897574 MODEL JAAIVD010000012;XR_004387583 snorna 625859640 LOC116914911 60S ribosomal protein L18-like 13 28488716 28489259 + 116914911 MODEL JAAIVD010000008 pseudo 625859641 LOC116889656 elongation factor Tu-like 22301074;30032202 116889656 MODEL JAAIVD010000045;XM_032890561 XP_032746452 protein-coding 625859642 Lrp6 LDL receptor related protein 6 ENCODES a protein that exhibits apolipoprotein binding (ortholog); coreceptor activity (ortholog); frizzled binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis elongation (ortholog); axis elongation involved in somitogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); autosomal dominant polycystic kidney disease (ortholog); coronary artery disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 6 14880437 15004551 + 22301074;30032202 116903175 MODEL JAAIVD010000024;XM_032905546 XP_032761437 low-density lipoprotein receptor-related protein 6 protein-coding 625859669 LOC116895416 ADP-sugar pyrophosphatase-like 3 62902309 62902952 + 116895416 MODEL JAAIVD010000012 pseudo 625859670 Mzb1 marginal zone B and B1 cell specific protein INVOLVED IN integrin activation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) 15 8728946 8731042 + 30032202 116884745 MODEL JAAIVD010000010;XM_032885964 XP_032741855 marginal zone B- and B1-cell-specific protein protein-coding 625859678 Il27ra interleukin 27 receptor subunit alpha ENCODES a protein that exhibits interleukin-27 receptor activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cellular extravasation (ortholog); negative regulation of interleukin-17 production (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); pneumoconiosis (ortholog); pulmonary tuberculosis (ortholog) 17 16241637 16252615 + 30032202 116886510 MODEL JAAIVD010000011;XM_032888018 XP_032743909 interleukin-27 receptor subunit alpha protein-coding 625859695 Efs embryonal Fyn-associated substrate ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH Crohn's disease (ortholog) 12 70064950 70075208 + 22301074;30032202 116913779 MODEL JAAIVD010000007;XM_032918085 XP_032773976 protein-coding 625859705 LOC116894592 vomeronasal type-1 receptor 2-like 2 181379214 181380149 + 22301074;30032202 116894592 MODEL JAAIVD010000001;XM_032896311 XP_032752202 protein-coding 625859708 Isoc1 isochorismatase domain containing 1 FOUND IN peroxisome (ortholog) 15 73143931 73164699 - 30032202 116884561 MODEL JAAIVD010000010;XM_032885702 XP_032741593 isochorismatase domain-containing protein 1 protein-coding 625859716 LOC116914739 zinc finger protein 239-like 13 11946318 11959090 + 30032202 116914739 MODEL JAAIVD010000008;XM_032919175;XM_032919176 XP_032775066;XP_032775067 zinc finger protein 627-like protein-coding 625859727 Pgm1 phosphoglucomutase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); phosphoglucomutase activity (ortholog); INVOLVED IN cellular response to magnetism (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; fructose-1,6-bisphosphatase deficiency pathway; galactokinase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN Z disc (ortholog) 1 54571055 54630538 - 22301074;30032202 116899793 MODEL JAAIVD010000025;XM_032901777 XP_032757668 phosphoglucomutase-1 protein-coding 625859742 LOC116891871 olfactory receptor 14C36-like 2 114373282 114374368 - 22301074;30032202 116891871 MODEL JAAIVD010000001;XM_032893272 XP_032749163 protein-coding 625859746 LOC116909268 olfactory receptor 10-like 9 32110537 32111472 + 22301074 116909268 MODEL JAAIVD010000002;XM_032912796 XP_032768687 protein-coding 625859749 Bach1 BTB domain and CNC homolog 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cardiotoxicity (ortholog); Fibrosis (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 4 56136911 56169873 - 22301074;30032202 116899027 MODEL JAAIVD010000003;XM_032900478 XP_032756369 transcription regulator protein BACH1 protein-coding 625859758 Chd4 chromodomain helicase DNA binding protein 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); brain disease (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cerebellar granule cell to Purkinje cell synapse (ortholog); chromosome, telomeric region (ortholog) 6 22767955 22801030 - 22301074;30032202 116903262 MODEL JAAIVD010000024;XM_032905654 XP_032761545 chromodomain-helicase-DNA-binding protein 4 protein-coding 625859802 Lsm14b LSM family member 14B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN maternal mRNA clearance (ortholog); meiotic cell cycle process involved in oocyte maturation (ortholog); membraneless organelle assembly (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) 5 157112186 157122929 + 30032202 116902398 MODEL JAAIVD010000023;XM_032904918;XM_032904919;XM_032904920;XM_032904921 XP_032760809;XP_032760810;XP_032760811;XP_032760812 protein LSM14 homolog B protein-coding 625859821 LOC116902840 amiloride-sensitive amine oxidase [copper-containing]-like 6 91985171 91990306 - 22301074;30032202 116902840 MODEL JAAIVD010000024;XM_032905169;XM_032905170 XP_032761060;XP_032761061 protein-coding 625859833 Srrd SRR1 domain containing INVOLVED IN regulation of circadian rhythm (ortholog); regulation of heme biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog) 16 41631871 41637396 + 30032202 116885127 MODEL JAAIVD010000004;XM_032886282;XM_032886283 XP_032742173;XP_032742174 SRR1-like protein protein-coding 625859849 Trappc14 trafficking protein particle complex subunit 14 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH primary autosomal recessive microcephaly 25 (ortholog); FOUND IN centriolar satellite (ortholog); midbody (ortholog); mitotic spindle (ortholog) 16 16039715 16044065 + 22301074;30032202 116885729 MODEL JAAIVD010000004;XM_032887039 XP_032742930 Map11 microtubule associated protein 11;microtubule-associated protein 11;trafficking protein particle complex 14 protein-coding 625859864 LOC116889757 uncharacterized protein KIAA2012-like 116889757 MODEL JAAIVD010000081;XM_032890619 XP_032746510 protein-coding 625859865 LOC116902756 40S ribosomal protein S25-like 6 63259559 63259997 + 30032202 116902756 MODEL JAAIVD010000024;XM_032905102 XP_032760993 protein-coding 625859870 LOC116883882 prolactin-3C1 14 46594032 46599769 - 22301074;30032202 116883882 MODEL JAAIVD010000009;XM_032885148 XP_032741039 protein-coding 625859879 LOC116897780 PCNA-associated factor-like 4 7919043 7940099 + 116897780 MODEL JAAIVD010000003 pseudo 625859880 Agxt2 alanine--glyoxylate aminotransferase 2 ENCODES a protein that exhibits (R)-3-amino-2-methylpropionate-pyruvate transaminase activity (ortholog); alanine-glyoxylate transaminase activity (ortholog); beta-alanine:pyruvate transaminase activity (ortholog); INVOLVED IN glycine biosynthetic process, by transamination of glyoxylate (ortholog); glyoxylate catabolic process (ortholog); L-alanine catabolic process, by transamination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Beta-Aminoisobutyric Acid, Urinary Excretion of (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN mitochondrion (ortholog) 3 170322094 170363885 - 22301074;30032202 116895619 MODEL JAAIVD010000012;XM_032896829;XM_032896830 XP_032752720;XP_032752721 alanine--glyoxylate aminotransferase 2, mitochondrial protein-coding 625859901 Rras2 RAS related 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of Schwann cell migration (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); genetic disease (ortholog); juvenile myelomonocytic leukemia (ortholog); FOUND IN plasma membrane (ortholog) 2 87399083 87466741 + 22301074;30032202 116891635 MODEL JAAIVD010000001;XM_032892850 XP_032748741 ras-related protein R-Ras2 protein-coding 625859911 LOC116890622 U1 spliceosomal RNA 1 53278525 53278678 - 116890622 MODEL JAAIVD010000025 pseudo 625859912 LOC116915121 small nucleolar RNA SNORA17 13 34641196 34641327 + 116915121 MODEL JAAIVD010000008;XR_004389802 snorna 625859915 Igsf23 immunoglobulin superfamily member 23 INVOLVED IN osteoclast differentiation (ortholog); FOUND IN plasma membrane (ortholog) 2 170670382 170683803 + 116892523 MODEL JAAIVD010000001;XM_032894278 XP_032750169 protein-coding 625859924 C2H16orf92 chromosome 2 C16orf92 homolog INVOLVED IN fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); lymphopenia (ortholog); neutropenia (ortholog) 2 75064419 75065404 + 22301074;30032202 116891503 MODEL JAAIVD010000001;XM_032892635 XP_032748526 uncharacterized protein C16orf92 homolog protein-coding 625859931 LOC116903884 uncharacterized LOC116903884 6 95324229 95330169 - 116903884 MODEL JAAIVD010000024;XR_004388309 ncrna 625859936 LOC116895647 nucleolar protein 16-like 3 183038221 183038777 + 116895647 MODEL JAAIVD010000012 pseudo 625859937 Vav1 vav guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN B cell proliferation (ortholog); G protein-coupled receptor signaling pathway (ortholog); immune response (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autistic disorder (ortholog); endometriosis (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog) 4 88682952 88731710 + 22301074;30032202 116898420 MODEL JAAIVD010000003;XM_032899701 XP_032755592 proto-oncogene vav protein-coding 625859967 Rbm3 RNA binding motif protein 3 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); INVOLVED IN miRNA processing (ortholog); positive regulation of translation (ortholog); regulation of translation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); large ribosomal subunit (ortholog) X 15545712 15549212 - 22301074;30032202 116888663 MODEL JAAIVD010000014;XM_032889954;XM_032889955;XM_032889956;XM_032889957 XP_032745845;XP_032745846;XP_032745847;XP_032745848 RNA-binding protein 3 protein-coding 625859986 Tsfm Ts translation elongation factor, mitochondrial INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 3 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 205452996 205460805 - 10397682;22301074;30032202 116909757 MODEL AJ005161;JAAIVD010000025;XM_032913446 CAB56708;XP_032769337 EF-Ts elongation factor;elongation factor Ts, mitochondrial protein-coding 625859996 Aunip aurora kinase A and ninein interacting protein ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of double-strand break repair via nonhomologous end joining (ortholog); spindle organization (ortholog); FOUND IN centrosome (ortholog); site of DNA damage (ortholog); spindle pole (ortholog) 1 23729053 23742686 - 30032202 116894719 MODEL JAAIVD010000025;XM_032896416;XM_032896418 XP_032752307;XP_032752309 aurora kinase A and ninein-interacting protein protein-coding 625860006 Dhx36 DEAH-box helicase 36 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); catalytic activity, acting on a nucleic acid (ortholog); DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); FOUND IN axon (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 3 92708340 92747104 + 22301074;30032202 116896830 MODEL JAAIVD010000012;XM_032898312 XP_032754203 ATP-dependent DNA/RNA helicase DHX36 protein-coding 625860035 LOC116911721 left-right determination factor 2 10 59207272 59211945 + 22301074;30032202 116911721 MODEL JAAIVD010000005;XM_032915694 XP_032771585 protein-coding 625860043 Ccdc85a coiled-coil domain containing 85A FOUND IN adherens junction (ortholog) 11 95923794 96148241 - 30032202 116912740 MODEL JAAIVD010000006;XM_032916880;XM_032916881;XM_032916882;XM_032916883;XM_032916885 XP_032772771;XP_032772772;XP_032772773;XP_032772774;XP_032772776 coiled-coil domain-containing protein 85A protein-coding 625860060 C1H19orf25 chromosome 1 C19orf25 homolog 1 154561015 154563183 + 116905214 MODEL JAAIVD010000025;XM_032908032 XP_032763923 UPF0449 protein C19orf25 homolog protein-coding 625860066 Fzd7 frizzled class receptor 7 ENCODES a protein that exhibits frizzled binding (ortholog); PDZ domain binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); mesenchymal to epithelial transition (ortholog); negative regulation of cardiac muscle cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; Wnt signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN plasma membrane (ortholog); recycling endosome membrane (ortholog) 4 133017959 133022330 - 30032202 116899412 MODEL JAAIVD010000003;XM_032901148 XP_032757039 frizzled-7 protein-coding 625860071 LOC116883693 40S ribosomal protein S21-like 14 71602873 71603218 - 116883693 MODEL JAAIVD010000009 pseudo 625860072 Eif3j eukaryotic translation initiation factor 3 subunit J ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) 5 100144516 100167234 + 22301074;30032202 116901880 MODEL JAAIVD010000023;XM_032904087 XP_032759978 protein-coding 625860084 Mllt1 MLLT1 super elongation complex subunit PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Hypertelorism (ortholog); nephroblastoma (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 4 88271708 88316610 - 22301074;30032202 116899201 MODEL JAAIVD010000003;XM_032900787;XM_032900788;XM_032900789 XP_032756678;XP_032756679;XP_032756680 protein ENL protein-coding 625860106 Znf334 zinc finger protein 334 5 152571678 152582109 + 22301074 116902334 MODEL JAAIVD010000023;XM_032904808 XP_032760699 protein-coding 625860114 Zbtb3 zinc finger and BTB domain containing 3 2 9142620 9144986 - 22301074;30032202 116890925 MODEL JAAIVD010000001;XM_032891564;XM_032891565 XP_032747455;XP_032747456 zinc finger and BTB domain-containing protein 3 protein-coding 625860125 LOC116908458 U6 spliceosomal RNA 8 99200222 99200328 - 116908458 MODEL JAAIVD010000027;XR_004388976 snrna 625860128 LOC116890430 U7 small nuclear RNA 1 199585923 199585984 + 116890430 MODEL JAAIVD010000025;XR_004386628 snrna 625860131 Lipa lipase A, lysosomal acid type ENCODES a protein that exhibits lipase activity (ortholog); sterol ester esterase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); adaptive thermogenesis (ortholog); adipose tissue development (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); coronary artery disease (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); lysosome (ortholog) 2 34118133 34148930 - 30032202 116891104 MODEL JAAIVD010000001;XM_032891817 XP_032747708 lysosomal acid lipase/cholesteryl ester hydrolase protein-coding 625860144 LOC116902595 small nucleolar RNA SNORA17 5 40388146 40388277 - 116902595 MODEL JAAIVD010000023;XR_004388185 snorna 625860147 LOC116893615 tumor necrosis factor receptor superfamily member 26-like 2 6064874 6094507 + 22301074;30032202 116893615 MODEL JAAIVD010000001;XM_032895326;XM_032895327 XP_032751217;XP_032751218 protein-coding 625860163 LOC116900062 ATP synthase subunit g, mitochondrial-like 5 6848375 6848749 + 116900062 MODEL JAAIVD010000023 pseudo 625860164 Plcxd3 phosphatidylinositol specific phospholipase C X domain containing 3 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 3 175643564 175811753 - 22301074;30032202 116897155 MODEL JAAIVD010000012;XM_032898825 XP_032754716 PI-PLC X domain-containing protein 3 protein-coding 625860171 Prr3 proline rich 3 18 9164651 9171775 - 22301074;30032202 116887481 MODEL JAAIVD010000013;XM_032889101;XM_032889102;XM_032889103;XM_032889104 XP_032744992;XP_032744993;XP_032744994;XP_032744995 proline-rich protein 3 protein-coding 625860187 Alkbh1 alkB homolog 1, histone H2A dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); chemoattractant activity (ortholog); INVOLVED IN cell differentiation (ortholog); developmental growth (ortholog); DNA repair (ortholog); FOUND IN endoplasmic reticulum (ortholog); euchromatin (ortholog); mitochondrion (ortholog) 7 101522645 101541770 - 30032202 116905326 MODEL JAAIVD010000026;XM_032908219 XP_032764110 nucleic acid dioxygenase ALKBH1 protein-coding 625860197 LOC116912666 40S ribosomal protein SA-like 11 9872117 9872923 - 116912666 MODEL JAAIVD010000006 pseudo 625860198 LOC116893106 serine/arginine repetitive matrix protein 3-like 2 66319275 66386159 - 116893106 MODEL JAAIVD010000001;XM_032895045 XP_032750936 protein-coding 625860204 LOC116889036 uncharacterized LOC116889036 X 19789161 19789956 - 116889036 MODEL JAAIVD010000014;XM_032890233 XP_032746124 uncharacterized protein LOC116889036 protein-coding 625860207 Aqp1 aquaporin 1 (Colton blood group) ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); camera-type eye morphogenesis (ortholog); carbon dioxide transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Aquaporin 1 Deficiency (ortholog); FOUND IN ankyrin-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 6 85726131 85738471 - 22301074;30032202 116903755 MODEL JAAIVD010000024;XM_032906446 XP_032762337 aquaporin-1 protein-coding 625860215 Prickle4 prickle planar cell polarity protein 4 4 82181786 82188111 + 22301074 116899076 MODEL JAAIVD010000003;XM_032900567;XM_032900568;XM_032900569;XM_032900570;XM_032900571;XM_032900572 XP_032756458;XP_032756459;XP_032756460;XP_032756461;XP_032756462;XP_032756463 prickle-like protein 4 protein-coding 625860242 Rexo1 RNA exonuclease 1 homolog ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 1 154325423 154344900 + 22301074;30032202 116905042 MODEL JAAIVD010000025;XM_032907726 XP_032763617 protein-coding 625860262 Dse dermatan sulfate epimerase ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome musculocontractural type 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 18 24187014 24258253 - 30032202 116886892 MODEL JAAIVD010000013;XM_032888349;XM_032888351;XM_032888352 XP_032744240;XP_032744242;XP_032744243 dermatan-sulfate epimerase protein-coding 625860278 L3mbtl4 L3MBTL histone methyl-lysine binding protein 4 ASSOCIATED WITH megacolon (ortholog) 4 178073835 178397200 + 22301074 116898594 MODEL JAAIVD010000003;XM_032899789 XP_032755680 lethal(3)malignant brain tumor-like protein 4 protein-coding 625860296 Fabp2 fatty acid binding protein 2 ENCODES a protein that exhibits fatty acid binding (ortholog); long-chain fatty acid binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); carotid stenosis (ortholog); coronary artery disease (ortholog); FOUND IN apical cortex (ortholog); microvillus (ortholog) 3 36912425 36916413 - 22301074;30032202 116896295 MODEL JAAIVD010000012;XM_032897378 XP_032753269 fatty acid-binding protein, intestinal protein-coding 625860304 Sdhd succinate dehydrogenase complex subunit D ENCODES a protein that exhibits heme binding (ortholog); protein-membrane adaptor activity (ortholog); succinate dehydrogenase (quinone) activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); regulation of catecholamine secretion (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; electron transport chain pathway; ASSOCIATED WITH Carney-Stratakis syndrome (ortholog); combined oxidative phosphorylation deficiency 8 (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex II (succinate dehydrogenase) (ortholog) 8 45067220 45076645 - 22301074;30032202 116906844 MODEL JAAIVD010000027;XM_032909739 XP_032765630 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial protein-coding 625860312 LOC116901296 uncharacterized LOC116901296 5 11677391 11677744 + 116901296 MODEL JAAIVD010000023;XR_004387974 ncrna 625860316 LOC116889801 histone H2A-Bbd type 2/3-like 22301074;30032202 116889801 MODEL JAAIVD010000626;XM_032890650 XP_032746541 protein-coding 625860317 Gtf2e2 general transcription factor IIE subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH genetic disease (ortholog); nonphotosensitive trichothiodystrophy 6 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); transcription factor TFIID complex (ortholog) 13 53236603 53284180 - 22301074;30032202 116914500 MODEL JAAIVD010000008;XM_032918813;XM_032918814 XP_032774704;XP_032774705 transcription initiation factor IIE subunit beta protein-coding 625860332 Il1r1 interleukin 1 receptor type 1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); heat acclimation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); aortic dissection (ortholog); Bacterial Keratitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 4 116514784 116555966 + 22301074;30032202 116899324 MODEL JAAIVD010000003;XM_032901011;XM_032901012;XM_032901013;XM_032901014;XM_032901015 XP_032756902;XP_032756903;XP_032756904;XP_032756905;XP_032756906 interleukin-1 receptor type 1 protein-coding 625860364 LOC116893526 nesprin-1-like 2 197580382 197716620 + 22301074 116893526 MODEL JAAIVD010000001;XM_032895251 XP_032751142 protein-coding 625860416 LOC116887946 interferon alpha-1-like 1 65163596 65164165 + 22301074;30032202 116887946 MODEL JAAIVD010000025;XM_032889401 XP_032745292 protein-coding 625860419 LOC116891902 uncharacterized LOC116891902 2 118727334 118730518 - 116891902 MODEL JAAIVD010000001;XR_004386868 ncrna 625860423 Mpv17 mitochondrial inner membrane protein MPV17 ENCODES a protein that exhibits channel activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); homeostatic process (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal recessive Alport syndrome (ortholog); Charcot-Marie-Tooth disease type 2EE (ortholog); cochlear disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 7 22931697 22944762 + 22301074;30032202 116905982 MODEL JAAIVD010000026;XM_032908999;XM_032909000;XM_032909001;XM_032909002;XM_032909003;XM_032909004;XM_032909005;XM_032909006 XP_032764890;XP_032764891;XP_032764892;XP_032764893;XP_032764894;XP_032764895;XP_032764896;XP_032764897 protein Mpv17 protein-coding 625860454 LOC116893721 fatty acid-binding protein 5-like 2 13682409 13682796 + 116893721 MODEL JAAIVD010000001 pseudo 625860455 LOC116897444 U6 spliceosomal RNA 3 200424566 200424670 + 116897444 MODEL JAAIVD010000012;XR_004387479 snrna 625860458 LOC116893255 40S ribosomal protein S27-like 2 132555846 132557067 - 116893255 MODEL JAAIVD010000001 pseudo 625860459 LOC116891780 short transient receptor potential channel 2 2 100379622 100397295 + 22301074;30032202 116891780 MODEL JAAIVD010000001;XM_032893122 XP_032749013 protein-coding 625860476 Tceal8 transcription elongation factor A like 8 ASSOCIATED WITH autistic disorder (ortholog) X 88163795 88165957 - 116888903 MODEL JAAIVD010000014;XM_032890161 XP_032746052 transcription elongation factor A protein-like 8 protein-coding 625860483 LOC116890231 heterogeneous nuclear ribonucleoprotein A1-like 1 271072434 271073532 + 116890231 MODEL JAAIVD010000025 pseudo 625860484 LOC116895337 glyceraldehyde-3-phosphate dehydrogenase-like 3 38696574 38697386 + 116895337 MODEL JAAIVD010000012 pseudo 625860485 Klhl41 kelch like family member 41 INVOLVED IN myofibril assembly (ortholog); protein ubiquitination (ortholog); pseudopodium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); nemaline myopathy (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 5 46972821 46986015 + 22301074 116901483 MODEL JAAIVD010000023;XM_032903438 XP_032759329 kelch-like protein 41 protein-coding 625860495 LOC116895601 heterogeneous nuclear ribonucleoprotein M-like 3 154804479 154806873 + 116895601 MODEL JAAIVD010000012 pseudo 625860496 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 95772802 95772874 + 116890636 MODEL JAAIVD010000025 trna 625860497 LOC116898001 40S ribosomal protein S6-like 4 61785954 61786720 + 116898001 MODEL JAAIVD010000003 pseudo 625860498 LOC116885547 cytochrome c oxidase assembly protein COX19 INVOLVED IN intracellular copper ion homeostasis (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 16 13856152 13864402 + 30032202 116885547 MODEL JAAIVD010000004;XM_032886841 XP_032742732 protein-coding 625860505 Pigk phosphatidylinositol glycan anchor biosynthesis class K ENCODES a protein that exhibits GPI-anchor transamidase activity (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Hypotonia and Cerebellar Atrophy, with or without Seizures (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog) 3 8843082 8925553 - 22301074;30032202 116896148 MODEL JAAIVD010000012;XM_032897133 XP_032753024 GPI-anchor transamidase protein-coding 625860520 LOC116883167 serine/arginine-rich splicing factor 3-like 14 19877965 19878376 - 116883167 MODEL JAAIVD010000009 pseudo 625860521 LOC116893099 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61540099 61564805 + 22301074 116893099 MODEL JAAIVD010000001;XM_032895040 XP_032750931 protein-coding 625860535 LOC116908232 olfactory receptor 10G6 8 82828666 82829622 + 22301074 116908232 MODEL JAAIVD010000027;XM_032911495 XP_032767386 protein-coding 625860539 Exoc6 exocyst complex component 6 INVOLVED IN erythrocyte differentiation (ortholog); PARTICIPATES IN insulin signaling pathway 2 36077804 36222944 - 22301074;30032202 116891128 MODEL JAAIVD010000001;XM_032891851 XP_032747742 protein-coding 625860565 Mvk mevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Arthralgia (ortholog); Chediak-Higashi syndrome (ortholog); exanthem (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisome (ortholog) 16 39492331 39510297 - 22301074;30032202 116885550 MODEL JAAIVD010000004;XM_032886843 XP_032742734 protein-coding 625860580 Wdr13 WD repeat domain 13 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN centriolar satellite (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) X 15524002 15535197 - 22301074;30032202 116888466 MODEL JAAIVD010000014;XM_032889746;XM_032889747 XP_032745637;XP_032745638 WD repeat-containing protein 13 protein-coding 625860597 Tmem54 transmembrane protein 54 1 29029348 29036235 - 116896281 MODEL JAAIVD010000025;XM_032897364 XP_032753255 protein-coding 625860607 LOC116897412 U6 spliceosomal RNA 3 2730255 2730361 - 116897412 MODEL JAAIVD010000012;XR_004387454 snrna 625860610 LOC116895689 heterogeneous nuclear ribonucleoprotein K-like 3 203701499 203703145 - 116895689 MODEL JAAIVD010000012;XR_004387300 pseudo 625860613 LOC116903699 mesoderm-specific transcript homolog protein-like 6 6781251 6782068 + 116903699 MODEL JAAIVD010000024 pseudo 625860614 Ftsj3 FtsJ RNA 2'-O-methyltransferase 3 ENCODES a protein that exhibits RNA 2'-O-methyltransferase activity (ortholog); INVOLVED IN RNA methylation (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 72863871 72870590 + 22301074;30032202 116909829 MODEL JAAIVD010000002;XM_032913546 XP_032769437 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3 protein-coding 625860639 LOC116885907 mucin-3A-like 16 16776856 16791413 + 30032202 116885907 MODEL JAAIVD010000004;XM_032887222 XP_032743113 protein-coding 625860653 LOC116893050 nuclear transport factor 2-like 2 32467373 32467749 + 116893050 MODEL JAAIVD010000001 pseudo 625860654 LOC116909020 C-C motif chemokine 7 9 88421098 88422954 - 22301074;30032202 116909020 MODEL JAAIVD010000002;XM_032912496 XP_032768387 protein-coding 625860661 Dll1 delta like canonical Notch ligand 1 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell-cell signaling (ortholog); cerebellar molecular layer formation (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); Chronic Pancreatitis (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog) 14 632774 640362 + 22301074;30032202 116884042 MODEL JAAIVD010000009;XM_032885288 XP_032741179 delta-like protein 1 protein-coding 625860676 Tubb2a tubulin beta 2A class IIa INVOLVED IN cerebral cortex development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); cerebellar hypoplasia (ortholog); complex cortical dysplasia with other brain malformations 5 (ortholog); FOUND IN intercellular bridge (ortholog); microtubule (ortholog); microtubule cytoskeleton (ortholog) 14 52646114 52649786 - 22301074;30032202 116884059 MODEL JAAIVD010000009;XM_032885306 XP_032741197 tubulin beta-2A chain protein-coding 625860684 LOC116887145 small nuclear ribonucleoprotein G-like 18 977783 981224 - 116887145 MODEL JAAIVD010000013 pseudo 625860685 Gpr150 G protein-coupled receptor 150 ASSOCIATED WITH Ovarian Neoplasms (ortholog) 3 221145094 221147232 + 22301074;30032202 116897357 MODEL JAAIVD010000012;XM_032899115;XM_032899116 XP_032755006;XP_032755007 probable G-protein coupled receptor 150 protein-coding 625860694 LOC116914581 short transmembrane mitochondrial protein 1-like 13 69562709 69562852 + 116914581 MODEL JAAIVD010000008;XM_032918940 XP_032774831 protein-coding 625860697 Trappc3 trafficking protein particle complex subunit 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog); TRAPP complex (ortholog) 1 32011959 32026296 - 22301074;30032202 116896643 MODEL JAAIVD010000025;XM_032897969;XM_032897978 XP_032753860;XP_032753869 trafficking protein particle complex 3 protein-coding 625860709 Tmem170b transmembrane protein 170B INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 14 60588753 60621269 + 30032202 116883426 MODEL JAAIVD010000009;XM_032884557 XP_032740448 protein-coding 625860716 LOC116914798 non-specific lipid-transfer protein-like 13 28566668 28567461 + 30032202 116914798 MODEL JAAIVD010000008;XM_032919248 XP_032775139 protein-coding 625860721 LOC116894754 40S ribosomal protein S24-like 2 165827354 165827969 + 116894754 MODEL JAAIVD010000001 pseudo 625860722 Mrps9 mitochondrial ribosomal protein S9 FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 4 119010566 119062683 + 22301074;30032202 116899338 MODEL JAAIVD010000003;XM_032901025 XP_032756916 28S ribosomal protein S9, mitochondrial protein-coding 625860737 LOC116907969 uncharacterized LOC116907969 1 168893316 168901478 + 116907969 MODEL JAAIVD010000025;XR_004388859 ncrna 625860742 LOC116900835 deoxycytidylate deaminase-like 5 49982612 49983166 - 116900835 MODEL JAAIVD010000023 pseudo 625860743 Ctnnd1 catenin delta 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH blepharocheilodontic syndrome 2 (ortholog); COVID-19 (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 5 61982929 62033046 - 30032202 116901581 MODEL JAAIVD010000023;XM_032903584;XM_032903585;XM_032903586;XM_032903587;XM_032903588;XM_032903589;XM_032903590;XM_032903591;XM_032903592;XM_032903594 XP_032759475;XP_032759476;XP_032759477;XP_032759478;XP_032759479;XP_032759480;XP_032759481;XP_032759482;XP_032759483;XP_032759485 catenin delta-1 protein-coding 625860786 Ptprn2 protein tyrosine phosphatase receptor type N2 INVOLVED IN insulin secretion involved in cellular response to glucose stimulus (ortholog); negative regulation of GTPase activity (ortholog); neurotransmitter secretion (ortholog); ASSOCIATED WITH prediabetes syndrome (ortholog); prostate cancer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); presynapse (ortholog); receptor complex (ortholog) 7 118845382 119570869 - 22301074;30032202 116905399 MODEL JAAIVD010000026;XM_032908352 XP_032764243 receptor-type tyrosine-protein phosphatase N2 protein-coding 625860813 LOC116888289 heterogeneous nuclear ribonucleoprotein A1-like X 116935475 116936710 + 116888289 MODEL JAAIVD010000014 pseudo 625860814 Twist1 twist family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone development (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acrocephalosyndactylia (ortholog); anaplastic large cell lymphoma (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog) 7 47301838 47302508 + 22301074;30032202 116905668 MODEL JAAIVD010000026;XM_032908652 XP_032764543 twist-related protein 1 protein-coding 625860818 Mro maestro ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 15 58112656 58128738 - 30032202 116884739 MODEL JAAIVD010000010;XM_032885952;XM_032885953;XM_032885954;XM_032885955;XM_032885956;XM_032885957;XM_032885958 XP_032741843;XP_032741844;XP_032741845;XP_032741846;XP_032741847;XP_032741848;XP_032741849 protein maestro protein-coding 625860847 LOC116893508 60S ribosomal protein L19-like 2 187130914 187131479 - 116893508 MODEL JAAIVD010000001 pseudo 625860848 LOC116887541 40S ribosomal protein S14-like 18 19984120 19984628 + 116887541 MODEL JAAIVD010000013 pseudo 625860849 Thy1 Thy-1 cell surface antigen ENCODES a protein that exhibits enzyme binding (ortholog); GPI anchor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Reperfusion Injury (ortholog); retinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); cell surface (ortholog) 8 38607326 38612426 + 116907076 MODEL JAAIVD010000027;XM_032910030 XP_032765921 thy-1 membrane glycoprotein protein-coding 625860857 Odam odontogenic, ameloblast associated INVOLVED IN inflammatory response (ortholog); odontogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 1078909 1088205 - 116912797 MODEL JAAIVD010000006;XM_032916962 XP_032772853 odontogenic ameloblast-associated protein protein-coding 625860873 LOC116896943 60S ribosomal protein L19-like 3 119212530 119213171 + 116896943 MODEL JAAIVD010000012 pseudo 625860874 LOC116913966 olfactory receptor 1509 ENCODES a protein that exhibits copper ion binding (ortholog); odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 12 71442670 71443596 - 22301074 116913966 MODEL JAAIVD010000007;XM_032918234 XP_032774125 protein-coding 625860877 Pagr1 PAXIP1 associated glutamate rich protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN chorion development (ortholog); DNA damage response (ortholog); positive regulation of cell cycle G1/S phase transition (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); esophagus squamous cell carcinoma (ortholog); lung metastasis (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) 2 74876388 74878376 + 116891492 MODEL JAAIVD010000001;XM_032892598 XP_032748489 PAXIP1-associated glutamate-rich protein 1 protein-coding 625860884 LOC116889860 glyceraldehyde-3-phosphate dehydrogenase-like 1 154066614 154067622 - 116889860 MODEL JAAIVD010000025 pseudo 625860885 Slc46a3 solute carrier family 46 member 3 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); vacuolar transmembrane transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN lysosomal membrane (ortholog) 16 5960832 5976304 + 22301074;30032202 116885791 MODEL JAAIVD010000004;XM_032887123 XP_032743014 protein-coding 625860895 Strn4 striatin 4 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); protein domain specific binding (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); regulation of modification of postsynaptic structure (ortholog); FOUND IN dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog); GABA-ergic synapse (ortholog) 2 172251724 172276833 - 30032202 116892567 MODEL JAAIVD010000001;XM_032894344;XM_032894345 XP_032750235;XP_032750236 striatin-4 protein-coding 625860921 Cilp cartilage intermediate layer protein ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH Intervertebral Disc Disease (ortholog); osteoarthritis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 8 59563061 59577815 + 22301074 116907301 MODEL JAAIVD010000027;XM_032910249 XP_032766140 cartilage intermediate layer protein 1 protein-coding 625860934 LOC116885516 vomeronasal type-1 receptor 3-like 1 214784576 214789390 - 116885516 MODEL JAAIVD010000025 pseudo 625860935 LOC116895041 small nucleolar RNA SNORA17 2 211333549 211333672 - 116895041 MODEL JAAIVD010000001 pseudo 625860936 C1H1orf94 chromosome 1 C1orf94 homolog 1 30161105 30204340 + 116886932 MODEL JAAIVD010000025;XM_032888430 XP_032744321 uncharacterized protein C1orf94 homolog protein-coding 625860946 Trim41 tripartite motif containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); defense response to virus (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 9 31407117 31417859 - 22301074;30032202 116908982 MODEL JAAIVD010000002;XM_032912452 XP_032768343 E3 ubiquitin-protein ligase TRIM41 protein-coding 625860956 Fam110b family with sequence similarity 110 member B FOUND IN cytosol (ortholog); mitochondrion (ortholog) 1 137093295 137227508 - 116903632 MODEL JAAIVD010000025;XM_032906296 XP_032762187 protein FAM110B protein-coding 625860963 Ddi2 DDI proteasomal shuttling factor 2 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); protein processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 16428745 16462251 + 22301074 116893263 MODEL JAAIVD010000025;XM_032895119 XP_032751010 DNA damage inducible 1 homolog 2;protein DDI1 homolog 2 protein-coding 625860976 Nipa1 NIPA magnesium transporter 1 INVOLVED IN magnesium ion transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog) 2 143179904 143219390 + 22301074;30032202 116892043 MODEL JAAIVD010000001;XM_032893507 XP_032749398 magnesium transporter NIPA1 protein-coding 625860985 LOC116904218 kinesin-like protein KIF1C 1 143268408 143271181 + 116904218 MODEL JAAIVD010000025 pseudo 625860986 Alkbh4 alkB homolog 4, lysine demethylase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); actin binding (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cleavage furrow ingression (ortholog); positive regulation of gene expression, epigenetic (ortholog); FOUND IN contractile ring (ortholog); midbody (ortholog) 16 17867789 17874828 - 30032202 116885753 MODEL JAAIVD010000004;XM_032887069 XP_032742960 alpha-ketoglutarate-dependent dioxygenase alkB homolog 4 protein-coding 625860993 Cabp4 calcium binding protein 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN photoreceptor cell morphogenesis (ortholog); phototransduction (ortholog); retinal bipolar neuron differentiation (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH achromatopsia (ortholog); Aland Island eye disease (ortholog); cone dystrophy (ortholog); FOUND IN cytosol (ortholog) 2 3502653 3507269 + 22301074 116890787 MODEL JAAIVD010000001;XM_032891257 XP_032747148 calcium-binding protein 4 protein-coding 625861003 Tigd3 tigger transposable element derived 3 2 1802440 1805226 + 22301074;30032202 116890691 MODEL JAAIVD010000001;XM_032891107;XM_032891109 XP_032746998;XP_032747000 tigger transposable element-derived protein 3 protein-coding 625861013 Pgghg protein-glucosylgalactosylhydroxylysine glucosidase ENCODES a protein that exhibits protein-glucosylgalactosylhydroxylysine glucosidase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); FOUND IN cytosol (ortholog) 2 8533900 8539209 - 22301074 116890893 MODEL JAAIVD010000001;XM_032891508;XM_032891509 XP_032747399;XP_032747400 protein-coding 625861033 Dnaaf3 dynein axonemal assembly factor 3 INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) 2 177125036 177132715 - 30032202 116892654 MODEL JAAIVD010000001;XM_032894477 XP_032750368 dynein assembly factor 3, axonemal protein-coding 625861049 Ptf1a pancreas associated transcription factor 1a ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell fate commitment (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH cerebellar disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Decreased Urinary Activity of Kallikrein (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 14 4650658 4652493 - 22301074;30032202 116884048 MODEL JAAIVD010000009;XM_032885294 XP_032741185 pancreas transcription factor 1 subunit alpha protein-coding 625861055 LOC116899893 small nucleolar RNA SNORA17 4 103736851 103736958 + 116899893 MODEL JAAIVD010000003 pseudo 625861056 LOC116884881 ATP synthase subunit g, mitochondrial-like 15 31112611 31113547 - 116884881 MODEL JAAIVD010000010 pseudo 625861057 LOC116902761 lithostathine-2-like 6 67904364 67906632 - 30032202 116902761 MODEL JAAIVD010000024;XM_032905109 XP_032761000 protein-coding 625861064 LOC116896546 40S ribosomal protein S20-like 3 61688327 61688839 - 22301074;30032202 116896546 MODEL JAAIVD010000012;XM_032897735 XP_032753626 protein-coding 625861069 Atp9b ATPase phospholipid transporting 9B (putative) ASSOCIATED WITH Cocaine-Related Disorders (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) 15 51307616 51496015 + 22301074;30032202 116884605 MODEL JAAIVD010000010;XM_032885744;XM_032885745 XP_032741635;XP_032741636 probable phospholipid-transporting ATPase IIB protein-coding 625861104 Tnni3 troponin I3, cardiac type ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart contraction (ortholog); heart development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); cardiac amyloidosis (ortholog); FOUND IN cardiac myofibril (ortholog); cardiac Troponin complex (ortholog); contractile muscle fiber (ortholog) 2 177120565 177125037 - 22301074;30032202 116893446 MODEL JAAIVD010000001;XM_032895213 XP_032751104 troponin I, cardiac muscle protein-coding 625861115 LOC116914021 high mobility group protein B1-like 12 79849642 79850249 + 116914021 MODEL JAAIVD010000007 pseudo 625861116 Fam161a FAM161 centrosomal protein A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN astral microtubule (ortholog); centriole (ortholog); centrosome (ortholog) 11 93871571 93877524 - 30032202 116912773 MODEL JAAIVD010000006;XM_032916924 XP_032772815 protein FAM161A protein-coding 625861123 Lhfpl7 LHFPL tetraspan subfamily member 7 16 40734567 40739195 - 30032202 116885246 MODEL JAAIVD010000004;XM_032886485 XP_032742376 Tmem211 transmembrane protein 211 protein-coding 625861128 LOC116885691 protein CUSTOS-like 16 2135923 2136795 + 116885691 MODEL JAAIVD010000004 pseudo 625861129 Bnip2 BCL2 interacting protein 2 INVOLVED IN blastocyst development (ortholog); centrosome cycle (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN centriole (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 64333782 64354828 + 30032202 116908145 MODEL JAAIVD010000027;XM_032911437;XM_032911438 XP_032767328;XP_032767329 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 protein-coding 625861147 LOC116889547 U2 spliceosomal RNA X 15971648 15971839 + 116889547 MODEL JAAIVD010000014;XR_004386481 snrna 625861150 LOC116900105 uncharacterized LOC116900105 5 12799984 12803522 - 116900105 MODEL JAAIVD010000023;XR_004387918 ncrna 625861154 Prss37 serine protease 37 INVOLVED IN binding of sperm to zona pellucida (ortholog); germ cell migration (ortholog); positive regulation of acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog) 6 99278563 99286227 + 22301074;30032202 116902884 MODEL JAAIVD010000024;XM_032905216 XP_032761107 probable inactive serine protease 37 protein-coding 625861164 LOC116898502 T-complex protein 1 subunit zeta-like 4 126612335 126613010 - 116898502 MODEL JAAIVD010000003 pseudo 625861165 LOC116894914 U7 small nuclear RNA 2 103895856 103895918 + 116894914 MODEL JAAIVD010000001;XR_004387116 snrna 625861168 LOC116889211 40S ribosomal protein S27-like X 107570990 107571245 + 116889211 MODEL JAAIVD010000014 pseudo 625861169 LOC116906592 uncharacterized LOC116906592 8 64549001 64565170 - 116906592 MODEL JAAIVD010000027;XR_004388752 ncrna 625861174 Jph3 junctophilin 3 INVOLVED IN exploration behavior (ortholog); learning (ortholog); locomotion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); genetic disease (ortholog); Huntington's disease-like 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); junctional membrane complex (ortholog) 17 41381644 41443174 + 22301074;30032202 116886199 MODEL JAAIVD010000011;XM_032887585 XP_032743476 junctophilin-3 protein-coding 625861183 Pacrgl parkin coregulated like 11 57584133 57602552 - 116911946 MODEL JAAIVD010000006;XM_032915857;XM_032915858;XM_032915859;XR_004389410;XR_004389411 XP_032771748;XP_032771749;XP_032771750 PACRG-like protein protein-coding 625861204 Arl11 ARF like GTPase 11 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Ovarian Neoplasms (ortholog) 12 63101725 63102715 - 22301074;30032202 116913629 MODEL JAAIVD010000007;XM_032917895 XP_032773786 ADP ribosylation factor like GTPase 11;ADP-ribosylation factor-like protein 11 protein-coding 625861209 LOC116915098 histone-binding protein RBBP7-like 13 13589216 13590665 - 116915098 MODEL JAAIVD010000008 pseudo 625861210 LOC116901751 60S ribosomal protein L30-like 5 90922945 90923333 + 116901751 MODEL JAAIVD010000023 pseudo 625861211 LOC116893333 glandular kallikrein-10-like 2 155443233 155445765 - 116893333 MODEL JAAIVD010000001 pseudo 625861212 Ankrd13a ankyrin repeat domain 13A ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of protein localization to endosome (ortholog); negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) 16 39149746 39179646 - 22301074;30032202 116885197 MODEL JAAIVD010000004;XM_032886421;XM_032886422 XP_032742312;XP_032742313 ankyrin repeat domain-containing protein 13A protein-coding 625861233 LOC116884001 elongation factor 1-gamma-like 14 20660 21946 - 116884001 MODEL JAAIVD010000009 pseudo 625861234 Dcaf10 DDB1 and CUL4 associated factor 10 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 1 1126189 1163024 - 22301074;30032202 116890776 MODEL JAAIVD010000025;XM_032891247 XP_032747138 DDB1- and CUL4-associated factor 10 protein-coding 625861245 LOC116913506 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 1 249151666 249152216 - 30032202 116913506 MODEL JAAIVD010000025;XM_032917714 XP_032773605 protein-coding 625861251 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42416447 42416519 - 116884178 MODEL JAAIVD010000009 trna 625861252 Ddx18 DEAD-box helicase 18 INVOLVED IN cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN chromosome (ortholog); nucleolus (ortholog) 10 14143619 14157220 - 22301074;30032202 116911406 MODEL JAAIVD010000005;XM_032915367 XP_032771258 ATP-dependent RNA helicase DDX18 protein-coding 625861269 Klhl15 kelch like family member 15 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); nuclear protein quality control by the ubiquitin-proteasome system (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); non-syndromic X-linked intellectual disability 103 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) X 52189535 52236848 + 22301074;30032202 116888498 MODEL JAAIVD010000014;XM_032889782;XM_032889783;XM_032889784;XM_032889785;XM_032889786;XM_032889787;XM_032889788;XM_032889789 XP_032745673;XP_032745674;XP_032745675;XP_032745676;XP_032745677;XP_032745678;XP_032745679;XP_032745680 kelch-like protein 15 protein-coding 625861298 LOC116895078 small nucleolar RNA SNORD23 2 173008610 173008718 - 116895078 MODEL JAAIVD010000001;XR_004387247 snorna 625861301 Tgfb3 transforming growth factor beta 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cell-cell junction organization (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN glypican signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); Brugada syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 7 100152665 100174682 - 22301074;30032202 116905303 MODEL JAAIVD010000026;XM_032908186;XM_032908187 XP_032764077;XP_032764078 transforming growth factor beta-3 proprotein protein-coding 625861316 LOC116893704 olfactory receptor 5B12-like 2 13228036 13228988 + 22301074;30032202 116893704 MODEL JAAIVD010000001;XM_032895420 XP_032751311 protein-coding 625861319 LOC116892051 vomeronasal type-1 receptor 4-like 2 143737636 143738597 + 22301074;30032202 116892051 MODEL JAAIVD010000001;XM_032893522 XP_032749413 protein-coding 625861322 LOC116898352 protein CEBPZOS-like 4 54298098 54298325 + 116898352 MODEL JAAIVD010000003 pseudo 625861323 Ccdc80 coiled-coil domain containing 80 ENCODES a protein that exhibits fibronectin binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); response to bacterium (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); interstitial matrix (ortholog) 4 29856597 29890041 + 116898869 MODEL JAAIVD010000003;XM_032900237 XP_032756128 coiled-coil domain-containing protein 80 protein-coding 625861335 Pyroxd1 pyridine nucleotide-disulphide oxidoreductase domain 1 ENCODES a protein that exhibits NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcomere (ortholog) 6 100298 116627 + 22301074 116903064 MODEL JAAIVD010000024;XM_032905363 XP_032761254 pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1 protein-coding 625861351 Glipr1l1 GLIPR1 like 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); protein localization involved in acrosome reaction (ortholog); FOUND IN acrosomal vesicle (ortholog); outer acrosomal membrane (ortholog); protein complex involved in cell-cell adhesion (ortholog) 1 190268864 190292029 - 22301074;30032202 116890013 MODEL JAAIVD010000025;XM_032890797 XP_032746688 GLIPR1-like protein 1 protein-coding 625861360 Gpr15lg G protein-coupled receptor 15 ligand ENCODES a protein that exhibits chemokine activity (ortholog); G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); defense response to fungus (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 13 15574859 15582422 - 22301074 116914751 MODEL JAAIVD010000008;XM_032919198 XP_032775089 C13H10orf99 chromosome 13 C10orf99 homolog;protein GPR15L protein-coding 625861367 LOC116914041 uncharacterized LOC116914041 12 76654153 76655277 - 116914041 MODEL JAAIVD010000007;XR_004389661 ncrna 625861372 LOC116889264 40S ribosomal protein S17-like X 95323367 95323864 + 116889264 MODEL JAAIVD010000014 pseudo 625861373 Serpina10 serpin family A member 10 INVOLVED IN liver regeneration (ortholog); regulation of acrosome reaction (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Liver Metastasis (ortholog); nephrotic syndrome type 5 (ortholog); small intestine carcinoid neuroendocrine tumor (ortholog) 7 114890414 114898871 - 22301074;30032202 116905376 MODEL JAAIVD010000026;XM_032908313;XM_032908314 XP_032764204;XP_032764205 protein Z-dependent protease inhibitor protein-coding 625861385 LOC116899956 ribosome biogenesis regulatory protein homolog 5 15004278 15005442 + 116899956 MODEL JAAIVD010000023 pseudo 625861386 LOC116894746 U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like 2 118862270 118871820 - 116894746 MODEL JAAIVD010000001 pseudo 625861387 LOC116894397 keratin-associated protein 20-2-like 2 157174883 157175044 + 116894397 MODEL JAAIVD010000001;XM_032896105 XP_032751996 protein-coding 625861390 Pik3r3 phosphoinositide-3-kinase regulatory subunit 3 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); insulin receptor signaling pathway (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN phosphatidylinositol 3-kinase complex (ortholog) 1 39901346 39970818 + 30032202 116898326 MODEL JAAIVD010000025;XM_032899661 XP_032755552 phosphatidylinositol 3-kinase regulatory subunit gamma protein-coding 625861404 Nhlh1 nescient helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 10 51170000 51175355 - 22301074;30032202 116911379 MODEL JAAIVD010000005;XM_032915321 XP_032771212 helix-loop-helix protein 1 protein-coding 625861410 LOC116905587 FUN14 domain-containing protein 2-like 7 3954937 3956139 - 116905587 MODEL JAAIVD010000026 pseudo 625861411 LOC116897051 uncharacterized LOC116897051 3 149568700 149607778 - 116897051 MODEL JAAIVD010000012;XR_004387391 ncrna 625861416 Slc67a2 solute carrier family 67 member 2 4 116988393 117007421 - 22301074 116899329 MODEL JAAIVD010000003;XM_032901020;XM_032901021;XM_032901022 XP_032756911;XP_032756912;XP_032756913 Mfsd9 major facilitator superfamily domain containing 9;major facilitator superfamily domain-containing protein 9 protein-coding 625861432 LOC116895581 glyceraldehyde-3-phosphate dehydrogenase-like 3 141901289 141902299 - 116895581 MODEL JAAIVD010000012 pseudo 625861433 Gpank1 G-patch domain and ankyrin repeats 1 18 7720773 7724115 + 22301074 116887078 MODEL JAAIVD010000013;XM_032888584;XM_032888585;XM_032888586;XM_032888587;XM_032888588 XP_032744475;XP_032744476;XP_032744477;XP_032744478;XP_032744479 G patch domain and ankyrin repeat-containing protein 1 protein-coding 625861452 LOC116893591 non-structural maintenance of chromosomes element 3 homolog 2 2170047 2171218 + 30032202 116893591 MODEL JAAIVD010000001;XM_032895289 XP_032751180 protein-coding 625861457 LOC116912055 probable ATP-dependent RNA helicase DDX5 11 92439587 92444684 + 116912055 MODEL JAAIVD010000006 pseudo 625861458 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12105946 12106018 + 116895126 MODEL JAAIVD010000001 trna 625861459 Cdc26 cell division cycle 26 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) 1 91125220 91140016 + 22301074;30032202 116901416 MODEL JAAIVD010000025;XM_032903307;XM_032903315;XM_032903322 XP_032759198;XP_032759206;XP_032759213 anaphase-promoting complex subunit CDC26 protein-coding 625861474 Prxl2a peroxiredoxin like 2A ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN regulation of osteoclast differentiation (ortholog); FOUND IN cytoplasm (ortholog) 13 19508763 19528262 - 116914672 MODEL JAAIVD010000008;XM_032919078;XM_032919079 XP_032774969;XP_032774970 peroxiredoxin-like 2A protein-coding 625861488 Ca10 carbonic anhydrase 10 9 51914947 52404770 - 30032202 116908475 MODEL JAAIVD010000002;XM_032911624 XP_032767515 carbonic anhydrase-related protein 10 protein-coding 625861501 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42523918 42523990 - 116884190 MODEL JAAIVD010000009 trna 625861502 LOC116910356 actin, cytoskeletal 4-like 9 71937261 71937910 - 116910356 MODEL JAAIVD010000002 pseudo 625861503 Dmrtb1 DMRT like family B with proline rich C-terminal 1 1 47141714 47149369 + 30032202 116887550 MODEL JAAIVD010000025;XM_032889184 XP_032745075 doublesex- and mab-3-related transcription factor B1 protein-coding 625861511 Mmd2 monocyte to macrophage differentiation associated 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); positive regulation of protein kinase activity (ortholog); positive regulation of Ras protein signal transduction (ortholog); FOUND IN Golgi membrane (ortholog); perinuclear region of cytoplasm (ortholog) 16 10532046 10577466 + 22301074;30032202 116885590 MODEL JAAIVD010000004;XM_032886894;XM_032886895 XP_032742785;XP_032742786 monocyte to macrophage differentiation factor 2 protein-coding 625861527 LOC116913384 olfactory receptor 49 ENCODES a protein that exhibits isoprenoid binding (ortholog); olfactory receptor activity (ortholog) 12 70716593 70717537 + 22301074;30032202 116913384 MODEL JAAIVD010000007;XM_032917563 XP_032773454 protein-coding 625861530 LOC116898391 chromobox protein homolog 2-like 4 75997646 75999268 + 116898391 MODEL JAAIVD010000003 pseudo 625861531 Mov10 Mov10 RNA helicase ENCODES a protein that exhibits 5'-3' RNA helicase activity (ortholog); RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); ASSOCIATED WITH hypertension (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); nucleus (ortholog) 3 53297916 53319607 + 22301074 116896426 MODEL JAAIVD010000012;XM_032897572 XP_032753463 Mov10 RISC complex RNA helicase;helicase MOV-10 protein-coding 625861556 Mynn myoneurin INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); FOUND IN nucleoplasm (ortholog) 3 124832013 124848150 + 22301074;30032202 116896973 MODEL JAAIVD010000012;XM_032898552;XM_032898553;XM_032898554;XM_032898555 XP_032754443;XP_032754444;XP_032754445;XP_032754446 protein-coding 625861573 Nmi N-myc and STAT interactor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 5 29729268 29745070 - 30032202 116901402 MODEL JAAIVD010000023;XM_032903278 XP_032759169 N-myc-interactor protein-coding 625861585 Ift43 intraflagellar transport 43 INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); ciliary basal body (ortholog) 7 100206007 100255581 + 22301074;30032202 116905305 MODEL JAAIVD010000026;XM_032908188;XM_032908189 XP_032764079;XP_032764080 intraflagellar transport protein 43 homolog protein-coding 625861599 Rsph4a radial spoke head component 4A INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); radial spoke head (ortholog) 18 28647279 28663331 + 22301074;30032202 116887050 MODEL JAAIVD010000013;XM_032888541 XP_032744432 radial spoke head protein 4 homolog A protein-coding 625861609 LOC116890562 small nucleolar RNA SNORA17 1 198539342 198539461 - 116890562 MODEL JAAIVD010000025 pseudo 625861610 Znhit3 zinc finger HIT-type containing 3 ASSOCIATED WITH genetic disease (ortholog); PEHO syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 85785650 85793852 + 22301074;30032202 116909191 MODEL JAAIVD010000002;XM_032912689 XP_032768580 zinc finger HIT domain-containing protein 3 protein-coding 625861619 LOC116904486 dimethyladenosine transferase 1, mitochondrial-like 6 146713183 146788197 + 116904486 MODEL JAAIVD010000024 pseudo 625861620 LOC116902815 putative vomeronasal receptor-like protein 4 6 83981755 83982666 - 22301074;30032202 116902815 MODEL JAAIVD010000024;XM_032905147 XP_032761038 protein-coding 625861623 LOC116891190 cytochrome P450 2B12 2 42693867 42704719 - 22301074;30032202 116891190 MODEL JAAIVD010000001;XM_032892010 XP_032747901 protein-coding 625861634 LOC116892872 LIM and senescent cell antigen-like-containing domain protein 1 2 195927951 195928940 - 116892872 MODEL JAAIVD010000001 pseudo 625861635 Tent5c terminal nucleotidyltransferase 5C ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mRNA stabilization (ortholog); negative regulation of cell differentiation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 3 57603139 57622056 + 22301074;30032202 116896469 MODEL JAAIVD010000012;XM_032897630 XP_032753521 protein-coding 625861641 LOC116904889 cytochrome c oxidase subunit 7C, mitochondrial-like 7 32504260 32504457 + 22301074;30032202 116904889 MODEL JAAIVD010000026;XM_032907490 XP_032763381 protein-coding 625861644 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41982873 41982944 - 116884170 MODEL JAAIVD010000009 trna 625861645 Afg1l AFG1 like ATPase INVOLVED IN mitochondrial protein catabolic process (ortholog); mitochondrial protein quality control (ortholog); mitochondrion organization (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 18 41990134 42149548 - 22301074;30032202 116887199 MODEL JAAIVD010000013;XM_032888755 XP_032744646 AFG1-like ATPase protein-coding 625861662 Ctxn2 cortexin 2 5 103460269 103460666 + 116900610 MODEL JAAIVD010000023;XM_032902327 XP_032758218 cortexin-2 protein-coding 625861667 LOC116885811 PCNA-associated factor-like 16 15454573 15454958 + 116885811 MODEL JAAIVD010000004 pseudo 625861668 LOC116900905 uncharacterized LOC116900905 5 78412895 78424012 + 30032202 116900905 MODEL JAAIVD010000023;XM_032902573 XP_032758464 uncharacterized protein LOC116900905 protein-coding 625861675 LOC116888701 protein FAM205A-2-like 1 3721412 3727756 + 116888701 MODEL JAAIVD010000025;XM_032889993 XP_032745884 protein-coding 625861681 LOC116900202 ras GTPase-activating protein-binding protein 2-like 5 51803771 51805419 + 116900202 MODEL JAAIVD010000023 pseudo 625861682 LOC116890456 small nucleolar RNA SNORD59 1 155566164 155566235 + 116890456 MODEL JAAIVD010000025;XR_004386648 snorna 625861685 Glod4 glyoxalase domain containing 4 FOUND IN mitochondrion (ortholog) 9 94931851 94949921 - 116910497 MODEL JAAIVD010000002;XM_032914389 XP_032770280 glyoxalase domain-containing protein 4 protein-coding 625861698 Tpgs2 tubulin polyglutamylase complex subunit 2 INVOLVED IN cilium disassembly (ortholog); microtubule cytoskeleton organization (ortholog); microtubule polymerization (ortholog) 15 18692980 18740026 + 30032202 116884698 MODEL JAAIVD010000010;XM_032885882;XM_032885884 XP_032741773;XP_032741775 protein-coding 625861712 C9H17orf99 chromosome 9 C17orf99 homolog INVOLVED IN mature B cell differentiation involved in immune response (ortholog); positive regulation of immunoglobulin production in mucosal tissue (ortholog); FOUND IN extracellular space (ortholog) 9 66257631 66269871 - 116910340 MODEL JAAIVD010000002;XM_032914196 XP_032770087 protein IL-40 protein-coding 625861720 Per1 period circadian regulator 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); E-box binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 48699910 48709309 + 30032202 116909221 MODEL JAAIVD010000002;XM_032912722 XP_032768613 period circadian protein homolog 1 protein-coding 625861746 Ndufa3 NADH:ubiquinone oxidoreductase subunit A3 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 178205862 178208535 + 22301074;30032202 116892698 MODEL JAAIVD010000001;XM_032894556 XP_032750447 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3 protein-coding 625861754 LOC116914360 microtubule-associated proteins 1A/1B light chain 3B-like 13 70479284 70479908 - 116914360 MODEL JAAIVD010000008 pseudo 625861755 Pex26 peroxisomal biogenesis factor 26 ENCODES a protein that exhibits ATPase binding (ortholog); protein-containing complex binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN protein import into peroxisome matrix (ortholog); protein import into peroxisome matrix, receptor recycling (ortholog); protein to membrane docking (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 6 25544457 25556348 - 22301074;30032202 116903321 MODEL JAAIVD010000024;XM_032905756;XM_032905757 XP_032761647;XP_032761648 peroxisome assembly protein 26 protein-coding 625861767 LOC116910310 chromobox protein homolog 3-like 9 50654192 50655059 - 116910310 MODEL JAAIVD010000002 pseudo 625861768 LOC116899998 60S ribosomal protein L17-like 5 120298433 120299000 - 116899998 MODEL JAAIVD010000023 pseudo 625861769 Marco macrophage receptor with collagenous structure ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amyloid-beta clearance (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Bacterial Lung Diseases (ortholog); Clostridium Infections (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 10 13070930 13104621 - 22301074 116911673 MODEL JAAIVD010000005;XM_032915627 XP_032771518 macrophage receptor MARCO protein-coding 625861790 Asprv1 aspartic peptidase retroviral like 1 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); skin development (ortholog); ASSOCIATED WITH genetic disease (ortholog); ichthyosis (ortholog); Lamellar Ichthyosis, Autosomal Dominant Form (ortholog) 6 59678433 59679959 - 22301074;30032202 116902743 MODEL JAAIVD010000024;XM_032905091 XP_032760982 retroviral-like aspartic protease 1 protein-coding 625861794 Sgsm2 small G protein signaling modulator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN late endosome to Golgi transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog) 9 93591343 93634170 - 22301074 116910540 MODEL JAAIVD010000002;XM_032914447;XM_032914448 XP_032770338;XP_032770339 protein-coding 625861825 Nsd1 nuclear receptor binding SET domain protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN gastrulation with mouth forming second (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); autistic disorder (ortholog); FOUND IN nucleus (ortholog) 14 73532826 73638872 + 22301074;30032202 116883446 MODEL JAAIVD010000009;XM_032884593 XP_032740484 histone-lysine N-methyltransferase, H3 lysine-36 and H4 lysine-20 specific protein-coding 625861853 Acer2 alkaline ceramidase 2 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ceramide catabolic process (ortholog); DNA damage response (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 67101172 67144922 - 22301074;30032202 116900452 MODEL JAAIVD010000025;XM_032902196 XP_032758087 protein-coding 625861863 LOC116893739 fructose-bisphosphate aldolase A-like 2 19994516 19995640 + 116893739 MODEL JAAIVD010000001;XR_004387002 pseudo 625861866 LOC116897105 uncharacterized protein C12orf29 homolog 3 159505986 159506927 + 116897105 MODEL JAAIVD010000012 pseudo 625861867 Adsl adenylosuccinate lyase ENCODES a protein that exhibits (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity (ortholog); identical protein binding (ortholog); N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenylosuccinase lyase deficiency (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) 1 250698722 250719763 + 22301074;30032202 116913889 MODEL JAAIVD010000025;XM_032918177 XP_032774068 protein-coding 625861884 Mki67 marker of proliferation Ki-67 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); RNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adult pineal parenchymal tumor (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 2 66204377 66229870 + 22301074;30032202 116891378 MODEL JAAIVD010000001;XM_032892390 XP_032748281 proliferation marker protein Ki-67 protein-coding 625861902 P2rx3 purinergic receptor P2X 3 ENCODES a protein that exhibits ATP binding (ortholog); extracellularly ATP-gated monoatomic cation channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral response to formalin induced pain (ortholog); behavioral response to pain (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Hyperalgesia (ortholog); Nervous System Trauma (ortholog); FOUND IN axon (ortholog); dendritic spine (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 5 62367309 62407428 - 22301074;30032202 116900232 MODEL JAAIVD010000023;XM_032901983 XP_032757874 P2X purinoceptor 3 protein-coding 625861919 C1qa complement C1q A chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte activation (ortholog); complement activation, classical pathway (ortholog); complement-mediated synapse pruning (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Injuries (ortholog); C1q Deficiency (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) 1 21333395 21336302 + 22301074 116886638 MODEL JAAIVD010000025;XM_032888144 XP_032744035 complement C1q subcomponent subunit A protein-coding 625861926 LOC116906128 pecanex-like protein 4 7 86707271 86740401 + 116906128 MODEL JAAIVD010000026 pseudo 625861927 LOC116898748 60S ribosomal protein L17-like 4 15505202 15505744 + 116898748 MODEL JAAIVD010000003 pseudo 625861928 Phtf1 putative homeodomain transcription factor 1 FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog) 3 54073189 54112026 - 30032202 116896437 MODEL JAAIVD010000012;XM_032897588;XM_032897589;XM_032897590;XM_032897591 XP_032753479;XP_032753480;XP_032753481;XP_032753482 protein-coding 625861956 LOC116906479 small nucleolar RNA SNORA17 7 20032647 20032762 - 116906479 MODEL JAAIVD010000026 pseudo 625861957 LOC116900671 cystatin-14 5 128311141 128317960 + 22301074 116900671 MODEL JAAIVD010000023;XM_032902375 XP_032758266 protein-coding 625861964 LOC116884918 ATP synthase F(0) complex subunit C1, mitochondrial-like 15 808793 809197 + 22301074;30032202 116884918 MODEL JAAIVD010000010;XM_032886140 XP_032742031 protein-coding 625861967 LOC116890302 U4 spliceosomal RNA 1 135093982 135094113 - 116890302 MODEL JAAIVD010000025 pseudo 625861968 LOC116886793 U6 spliceosomal RNA 17 12780493 12780599 + 116886793 MODEL JAAIVD010000011;XR_004386184 snrna 625861971 LOC116905167 V-type proton ATPase subunit E 1-like 1 147380675 147383173 + 116905167 MODEL JAAIVD010000025 pseudo 625861972 Ccar2 cell cycle and apoptosis regulator 2 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN mitochondrial fragmentation involved in apoptotic process (ortholog); negative regulation of catalytic activity (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Wallerian Degeneration (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); DBIRD complex (ortholog) 12 54194054 54209417 + 30032202 116913060 MODEL JAAIVD010000007;XM_032917188;XM_032917189 XP_032773079;XP_032773080 cell cycle and apoptosis regulator protein 2 protein-coding 625861999 Melk maternal embryonic leucine zipper kinase ENCODES a protein that exhibits calcium ion binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell population proliferation (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 1 2148942 2209014 - 22301074;30032202 116890861 MODEL JAAIVD010000025;XM_032891431 XP_032747322 protein-coding 625862022 Nrbp1 nuclear receptor binding protein 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); epithelial cell differentiation (ortholog); epithelial cell proliferation (ortholog); FOUND IN endomembrane system (ortholog); perinuclear region of cytoplasm (ortholog) 7 22828966 22839414 - 22301074;30032202 116905974 MODEL JAAIVD010000026;XM_032908984;XM_032908985 XP_032764875;XP_032764876 nuclear receptor-binding protein protein-coding 625862048 LOC116887983 ribosome biogenesis protein NSA2 homolog X 70596830 70598069 + 116887983 MODEL JAAIVD010000014 pseudo 625862049 LOC116883974 alpha-actinin-2-like 14 25728742 25738226 + 22301074;30032202 116883974 MODEL JAAIVD010000009;XM_032885208 XP_032741099 protein-coding 625862059 LOC116898339 proline/serine-rich coiled-coil protein 1-like 4 46394075 46396970 + 116898339 MODEL JAAIVD010000003 pseudo 625862060 Eif4a2 eukaryotic translation initiation factor 4A2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RNA-dependent RNA polymerase activity (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Neoplasm Metastasis (ortholog); neurodevelopmental disorder with hypotonia and speech delay (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 4 7898082 7904742 + 22301074;30032202 116898724 MODEL JAAIVD010000003;XM_032900026;XM_032900028;XM_032900029;XR_004387654;XR_004387655 XP_032755917;XP_032755919;XP_032755920 eukaryotic initiation factor 4A-II protein-coding 625862088 Cog3 component of oligomeric golgi complex 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); glycosylation (ortholog); Golgi organization (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIbb (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi transport complex (ortholog) 12 48653474 48704131 + 30032202 116914074 MODEL JAAIVD010000007;XM_032918381 XP_032774272 conserved oligomeric Golgi complex subunit 3 protein-coding 625862115 LOC116897856 60S ribosomal protein L35a-like 4 17962847 17963271 - 116897856 MODEL JAAIVD010000003 pseudo 625862116 Ccdc85c coiled-coil domain containing 85C INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); cell junction (ortholog) 7 125873822 125946237 - 30032202 116906270 MODEL JAAIVD010000026;XM_032909158 XP_032765049 coiled-coil domain-containing protein 85C protein-coding 625862126 LOC116890815 ceramide synthase-like 1 47909461 47910225 + 116890815 MODEL JAAIVD010000025 pseudo 625862127 LOC116905218 transcription initiation factor TFIID subunit 8-like 7 94589692 94590618 - 22301074;30032202 116905218 MODEL JAAIVD010000026;XM_032908033 XP_032763924 protein-coding 625862130 LOC116894042 olfactory receptor 51G2-like 2 102519054 102520004 + 22301074 116894042 MODEL JAAIVD010000001;XM_032895762 XP_032751653 protein-coding 625862133 Rragd Ras related GTP binding D ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); cellular response to leucine starvation (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); renal hypomagnesemia 7, with or without dilated cardiomyopathy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); lysosome (ortholog) 1 110023215 110057908 - 22301074;30032202 116902341 MODEL JAAIVD010000025;XM_032904826 XP_032760717 ras-related GTP-binding protein D protein-coding 625862144 LOC116884351 ATP synthase subunit a-like 15 36406200 36406774 - 116884351 MODEL JAAIVD010000010 pseudo 625862145 Ss18l2 SS18 like 2 8 112871388 112875985 + 30032202 116907975 MODEL JAAIVD010000027;XM_032911206;XR_004388860;XR_004388861 XP_032767097 SS18-like protein 2 protein-coding 625862158 Gpr139 G protein-coupled receptor 139 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog) 2 82470247 82510687 + 22301074 116893927 MODEL JAAIVD010000001;XM_032895648 XP_032751539 probable G-protein coupled receptor 139 protein-coding 625862163 LOC116883574 heterogeneous nuclear ribonucleoprotein A1-like 14 42080937 42082087 - 116883574 MODEL JAAIVD010000009 pseudo 625862164 LOC116886987 glucosamine 6-phosphate N-acetyltransferase-like 18 48690762 48693560 + 116886987 MODEL JAAIVD010000013 pseudo 625862165 LOC116906130 uncharacterized LOC116906130 7 86884724 86915769 - 116906130 MODEL JAAIVD010000026 pseudo 625862166 Gria3 glutamate ionotropic receptor AMPA type subunit 3 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN cellular response to glycine (ortholog); long-term synaptic potentiation (ortholog); protein heterotetramerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); dendrite (ortholog) X 107600728 107882569 + 22301074;30032202 116888373 MODEL JAAIVD010000014;XM_032889648;XM_032889649 XP_032745539;XP_032745540 glutamate receptor 3 protein-coding 625862192 Insl3 insulin like 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); in utero embryonic development (ortholog); male gonad development (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 13 13275785 13277722 - 22301074;30032202 116914269 MODEL JAAIVD010000008;XM_032918491 XP_032774382 insulin-like 3 protein-coding 625862198 Mrpl23 mitochondrial ribosomal protein L23 FOUND IN fibrillar center (ortholog); mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 6935100 6942881 - 22301074;30032202 116890844 MODEL JAAIVD010000001;XM_032891373 XP_032747264 39S ribosomal protein L23, mitochondrial protein-coding 625862207 LOC116885632 uncharacterized LOC116885632 16 19480652 19482591 - 116885632 MODEL JAAIVD010000004;XR_004386028 ncrna 625862211 LOC116899851 small nucleolar RNA SNORA17 4 8164896 8165026 - 116899851 MODEL JAAIVD010000003;XR_004387847 snorna 625862214 LOC116888036 alpha-adducin-like X 84463061 84465490 - 116888036 MODEL JAAIVD010000014 pseudo 625862215 LOC116895883 60S ribosomal protein L34-like 1 79977719 80096173 + 116895883 MODEL JAAIVD010000025 pseudo 625862216 Prtg protogenin ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of neurogenesis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 8 67155702 67257725 + 22301074;30032202 116906897 MODEL JAAIVD010000027;XM_032909808;XM_032909809 XP_032765699;XP_032765700 protein-coding 625862244 LOC116915003 claudin-22-like 13 40207868 40208530 - 30032202 116915003 MODEL JAAIVD010000008;XM_032919403 XP_032775294 protein-coding 625862247 LOC116905304 prohibitin-like 1 148497311 148498202 - 116905304 MODEL JAAIVD010000025 pseudo 625862248 LOC116895448 protein/nucleic acid deglycase DJ-1-like 3 74402238 74402833 - 116895448 MODEL JAAIVD010000012 pseudo 625862249 LOC116893076 PRAME family member 8-like 1 14730356 14742120 - 22301074;30032202 116893076 MODEL JAAIVD010000025;XM_032895031 XP_032750922 protein-coding 625862257 Abcf3 ATP binding cassette subfamily F member 3 ASSOCIATED WITH prostate cancer (ortholog) 4 5386060 5397783 + 22301074;30032202 116898694 MODEL JAAIVD010000003;XM_032899954;XM_032899955 XP_032755845;XP_032755846 ATP-binding cassette sub-family F member 3 protein-coding 625862285 LOC116889289 zinc finger protein 32-like X 98148316 98149474 + 116889289 MODEL JAAIVD010000014 pseudo 625862286 LOC116889490 U1 spliceosomal RNA X 23436951 23437097 - 116889490 MODEL JAAIVD010000014 pseudo 625862287 LOC116913843 GTP-binding nuclear protein Ran-like 12 48311954 48312651 - 116913843 MODEL JAAIVD010000007 pseudo 625862288 Gpr32 G protein-coupled receptor 32 ASSOCIATED WITH autism spectrum disorder (ortholog) 2 155260098 155261130 + 30032202 116893328 MODEL JAAIVD010000001;XM_032895145 XP_032751036 probable G-protein coupled receptor 32 protein-coding 625862291 Zdhhc6 zDHHC palmitoyltransferase 6 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-stearoyltransferase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 60844338 60863496 + 22301074;30032202 116891343 MODEL JAAIVD010000001;XM_032892332;XM_032892333;XM_032892334;XM_032892335 XP_032748223;XP_032748224;XP_032748225;XP_032748226 palmitoyltransferase ZDHHC6;zinc finger DHHC-type palmitoyltransferase 6 protein-coding 625862317 LOC116912934 U7 small nuclear RNA 11 61660366 61660427 - 116912934 MODEL JAAIVD010000006;XR_004389504 snrna 625862320 LOC116906103 inorganic pyrophosphatase 2, mitochondrial-like 7 75544107 75599936 - 116906103 MODEL JAAIVD010000026 pseudo 625862321 Sclt1 sodium channel and clathrin linker 1 ENCODES a protein that exhibits clathrin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH astigmatism (ortholog); autosomal recessive polycystic kidney disease (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 112199004 112332174 + 30032202 116896902 MODEL JAAIVD010000012;XM_032898450;XM_032898451;XM_032898452;XM_032898453 XP_032754341;XP_032754342;XP_032754343;XP_032754344 protein-coding 625862354 Papln papilin, proteoglycan like sulfated glycoprotein FOUND IN basement membrane (ortholog) 7 97856330 97887002 + 22301074;30032202 116906154 MODEL JAAIVD010000026;XM_032909135 XP_032765026 papilin protein-coding 625862384 LOC116887755 U6 spliceosomal RNA 18 1069049 1069155 - 116887755 MODEL JAAIVD010000013;XR_004386255 snrna 625862387 Slc27a4 solute carrier family 27 member 4 ENCODES a protein that exhibits long-chain fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); fatty acid metabolic process (ortholog); fatty acid transport (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); genetic disease (ortholog); Ichthyosis Prematurity Syndrome (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 6918882 6931706 - 30032202 116901213 MODEL JAAIVD010000023;XM_032902929 XP_032758820 long-chain fatty acid transport protein 4 protein-coding 625862404 Pparg peroxisome proliferator activated receptor gamma ENCODES a protein that exhibits alpha-actinin binding (ortholog); arachidonate binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); beige fat cell differentiation (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN DNA modification pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 31222604 31347537 - 22301074;30032202 116903385 MODEL JAAIVD010000024;XM_032905878;XM_032905879;XM_032905881;XM_032905882 XP_032761769;XP_032761770;XP_032761772;XP_032761773 peroxisome proliferator-activated receptor gamma protein-coding 625862424 LOC116885114 U1 spliceosomal RNA 15 47628577 47628730 + 116885114 MODEL JAAIVD010000010 pseudo 625862425 LOC116902469 U6 spliceosomal RNA 5 122732299 122732402 - 116902469 MODEL JAAIVD010000023;XR_004388087 snrna 625862428 Snta1 syntrophin alpha 1 ENCODES a protein that exhibits ATPase binding (ortholog); nitric-oxide synthase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); regulation of heart rate (ortholog); regulation of sodium ion transmembrane transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Becker muscular dystrophy (ortholog); Brugada syndrome (ortholog); FOUND IN neuromuscular junction (ortholog); postsynaptic membrane (ortholog); protein-containing complex (ortholog) 5 133739884 133770294 - 22301074;30032202 116902157 MODEL JAAIVD010000023;XM_032904492;XM_032904493 XP_032760383;XP_032760384 alpha-1-syntrophin protein-coding 625862442 Sinhcaf SIN3-HDAC complex associated factor INVOLVED IN negative regulation of cell differentiation (ortholog); negative regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN Sin3-type complex (ortholog) 6 6563468 6588201 - 30032202 116903113 MODEL JAAIVD010000024;XM_032905446;XM_032905447 XP_032761337;XP_032761338 SIN3-HDAC complex-associated factor protein-coding 625862455 Baiap2l1 BAR/IMD domain containing adaptor protein 2 like 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN positive regulation of actin filament polymerization (ortholog); regulation of actin cytoskeleton organization (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 8829780 8918469 + 22301074;30032202 116885219 MODEL JAAIVD010000004;XM_032886455;XM_032886456 XP_032742346;XP_032742347 brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1 protein-coding 625862478 Trpm6 transient receptor potential cation channel subfamily M member 6 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); magnesium ion transmembrane transport (ortholog); metal ion transport (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Eye Abnormalities (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); nucleus (ortholog) 2 18760619 18901122 + 22301074;30032202 116891019 MODEL JAAIVD010000001;XM_032891699 XP_032747590 protein-coding 625862521 LOC116898480 histone H3.3-like 4 116470507 116470917 - 22301074;30032202 116898480 MODEL JAAIVD010000003;XM_032899727 XP_032755618 protein-coding 625862524 LOC116889105 solute carrier family 25 member 39-like X 1248889 1250030 - 116889105 MODEL JAAIVD010000014 pseudo 625862525 Nup188 nucleoporin 188 INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); respiratory failure (ortholog); FOUND IN nuclear envelope (ortholog) 5 5287533 5344279 - 22301074;30032202 116901186 MODEL JAAIVD010000023;XM_032902870 XP_032758761 nucleoporin NUP188 homolog protein-coding 625862573 Ngb neuroglobin ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); nitrite reductase activity (ortholog); oxygen binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); encephalitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); perikaryon (ortholog) 7 101198563 101203698 - 22301074 116905316 MODEL JAAIVD010000026;XM_032908205 XP_032764096 protein-coding 625862581 Mtdh metadherin ENCODES a protein that exhibits double-stranded RNA binding (ortholog); NF-kappaB binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 1 207824863 207883150 + 22301074;30032202 116910419 MODEL JAAIVD010000025;XM_032914266;XM_032914272;XM_032914278;XM_032914285;XM_032914293;XM_032914299;XM_032914309 XP_032770157;XP_032770163;XP_032770169;XP_032770176;XP_032770184;XP_032770190;XP_032770200 protein LYRIC protein-coding 625862604 Fam110a family with sequence similarity 110 member A INVOLVED IN mitotic spindle organization (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytosol (ortholog) 5 131334018 131344884 - 116902111 MODEL JAAIVD010000023;XM_032904422;XM_032904423 XP_032760313;XP_032760314 protein FAM110A protein-coding 625862613 LOC116893918 ATP-binding cassette sub-family A member 3-like 2 81299185 81390960 - 22301074;30032202 116893918 MODEL JAAIVD010000001;XM_032895640 XP_032751531 protein-coding 625862648 LOC116903435 poly [ADP-ribose] polymerase 1-like 6 37552322 37556090 - 22301074 116903435 MODEL JAAIVD010000024;XM_032905988 XP_032761879 protein-coding 625862653 Tmco2 transmembrane and coiled-coil domains 2 1 35911633 35916235 + 30032202 116897205 MODEL JAAIVD010000025;XM_032898916 XP_032754807 transmembrane and coiled-coil domain-containing protein 2 protein-coding 625862659 LOC116888646 collagen alpha-5(IV) chain-like X 91703619 92464155 - 22301074;30032202 116888646 MODEL JAAIVD010000014;XM_032889937 XP_032745828 protein-coding 625862716 Vwc2 von Willebrand factor C domain containing 2 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of cell-substrate adhesion (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) 11 80096521 80218281 + 22301074;30032202 116912334 MODEL JAAIVD010000006;XM_032916379 XP_032772270 brorin protein-coding 625862724 Lysmd2 LysM domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) 8 69905363 69920430 + 116907413 MODEL JAAIVD010000027;XM_032910374;XM_032910375 XP_032766265;XP_032766266 lysM and putative peptidoglycan-binding domain-containing protein 2 protein-coding 625862734 LOC116903459 E3 ubiquitin-protein ligase PDZRN3 6 45856447 45903810 + 22301074;30032202 116903459 MODEL JAAIVD010000024;XM_032906013 XP_032761904 protein-coding 625862746 LOC116893582 ETS translocation variant 5-like 2 228901133 228913172 - 116893582 MODEL JAAIVD010000001 pseudo 625862747 Hlf HLF transcription factor, PAR bZIP family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); prostate cancer (ortholog); stomach cancer (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) 9 80428729 80485116 + 30032202 116908763 MODEL JAAIVD010000002;XM_032912115;XM_032912116 XP_032768006;XP_032768007 hepatic leukemia factor protein-coding 625862757 LOC116897942 olfactory receptor 5AC1-like 4 43000736 43001656 - 22301074;30032202 116897942 MODEL JAAIVD010000003;XM_032899342 XP_032755233 protein-coding 625862760 Klf3 KLF transcription factor 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) 11 21822611 21853060 + 30032202 116912085 MODEL JAAIVD010000006;XM_032915967;XM_032915968 XP_032771858;XP_032771859 Krueppel-like factor 3;Kruppel like factor 3 protein-coding 625862773 LOC116891333 uncharacterized LOC116891333 2 59561329 59565576 - 116891333 MODEL JAAIVD010000001;XR_004386830 ncrna 625862777 LOC116888964 peptidyl-prolyl cis-trans isomerase A-like X 7067030 7067518 - 116888964 MODEL JAAIVD010000014 pseudo 625862778 Tnfsf10 TNF superfamily member 10 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); TRAIL binding (ortholog); INVOLVED IN male gonad development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); Brain Injuries (ortholog); FOUND IN extracellular space (ortholog) 3 127369263 127385999 - 22301074;30032202 116896991 MODEL JAAIVD010000012;XM_032898584 XP_032754475 tumor necrosis factor ligand superfamily member 10 protein-coding 625862787 LOC116894337 L-lactate dehydrogenase C chain 2 152494027 152510528 - 22301074 116894337 MODEL JAAIVD010000001;XM_032896030;XM_032896031;XM_032896032;XM_032896033 XP_032751921;XP_032751922;XP_032751923;XP_032751924 protein-coding 625862806 LOC116894106 olfactory receptor 52D1-like 2 103559821 103560807 + 22301074 116894106 MODEL JAAIVD010000001;XM_032895825 XP_032751716 protein-coding 625862810 LOC116902844 39S ribosomal protein L17, mitochondrial-like 6 92656193 92656879 - 22301074;30032202 116902844 MODEL JAAIVD010000024;XM_032905174 XP_032761065 protein-coding 625862814 LOC116895901 serine hydroxymethyltransferase, mitochondrial-like 3 120250002 120251297 + 116895901 MODEL JAAIVD010000012 pseudo 625862815 LOC116909327 asialoglycoprotein receptor 2-like 9 49707303 49719383 + 30032202 116909327 MODEL JAAIVD010000002;XM_032912867 XP_032768758 protein-coding 625862826 LOC116903910 uncharacterized LOC116903910 6 98959943 98971125 - 116903910 MODEL JAAIVD010000024;XR_004388310 ncrna 625862832 LOC116914023 WW domain-binding protein 11-like 12 81148960 81150672 + 116914023 MODEL JAAIVD010000007 pseudo 625862833 Arpc2 actin related protein 2/3 complex subunit 2 ENCODES a protein that exhibits actin filament binding (ortholog); AP-1 adaptor complex binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); invasive ductal carcinoma (ortholog); melanoma (ortholog); FOUND IN actin filament branch point (ortholog); apical dendrite (ortholog); Arp2/3 protein complex (ortholog) 4 147690454 147720652 + 22301074;30032202 116899494 MODEL JAAIVD010000003;XM_032901326;XM_032901327;XM_032901329 XP_032757217;XP_032757218;XP_032757220 actin-related protein 2/3 complex subunit 2 protein-coding 625862853 LOC116900355 olfactory receptor 5W2-like 5 69236961 69237899 - 22301074;30032202 116900355 MODEL JAAIVD010000023;XM_032902109 XP_032758000 protein-coding 625862856 Bglap bone gamma-carboxyglutamate protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); hormone activity (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH asthma (ortholog); autosomal dominant hypocalcemia (ortholog); Bone Fractures (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) 3 65181043 65181965 + 22301074;30032202 116896690 MODEL JAAIVD010000012;XM_032898082 XP_032753973 osteocalcin protein-coding 625862864 Slco1c1 solute carrier organic anion transporter family member 1C1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); positive regulation of thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); primary biliary cholangitis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 6 8008086 8054010 - 22301074;30032202 116903126 MODEL JAAIVD010000024;XM_032905478;XM_032905479 XP_032761369;XP_032761370 protein-coding 625862885 Itpr3 inositol 1,4,5-trisphosphate receptor type 3 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acrodermatitis (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) 18 6688666 6753405 - 22301074 116886886 MODEL JAAIVD010000013;XM_032888344 XP_032744235 protein-coding 625862947 LOC116910345 translation machinery-associated protein 7-like 9 68042356 68042844 + 116910345 MODEL JAAIVD010000002 pseudo 625862948 LOC116911624 40S ribosomal protein S3a-like 10 30929687 30933319 + 116911624 MODEL JAAIVD010000005 pseudo 625862949 Arhgap23 Rho GTPase activating protein 23 ASSOCIATED WITH COVID-19 (ortholog); polycystic ovary syndrome (ortholog) 9 56883139 56937075 - 22301074 116908587 MODEL JAAIVD010000002;XM_032911803 XP_032767694 rho GTPase-activating protein 23 protein-coding 625862974 Krtap29-1 keratin associated like protein 29-1 9 54717282 54718304 - 116909042 MODEL JAAIVD010000002;XM_032912523 XP_032768414 keratin-associated protein 29-1 protein-coding 625862977 LOC116913193 T-cell receptor alpha chain V region 2B4-like 12 65714911 65715857 - 116913193 MODEL JAAIVD010000007;XR_004389600 pseudo 625862981 LOC116884362 60S acidic ribosomal protein P0-like 15 39279961 39280701 - 116884362 MODEL JAAIVD010000010 pseudo 625862982 Rev1 REV1 DNA directed polymerase ENCODES a protein that exhibits deoxycytidyl transferase activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN DNA repair (ortholog); error-prone translesion synthesis (ortholog); response to UV (ortholog); FOUND IN nuclear replication fork (ortholog); nucleus (ortholog) 4 114241228 114313530 - 22301074;30032202 116899309 MODEL JAAIVD010000003;XM_032900969;XM_032900970;XM_032900971;XM_032900972;XM_032900973;XM_032900974 XP_032756860;XP_032756861;XP_032756862;XP_032756863;XP_032756864;XP_032756865 DNA repair protein REV1 protein-coding 625863023 Agtpbp1 ATP/GTP binding carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); ASSOCIATED WITH Childhood-Onset Neurodegeneration with Cerebellar Atrophy (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) 14 78580921 78699019 + 22301074;30032202 116883757 MODEL JAAIVD010000009;XM_032885002;XM_032885003;XM_032885004;XM_032885005 XP_032740893;XP_032740894;XP_032740895;XP_032740896 ATP/GTP binding protein 1;cytosolic carboxypeptidase 1 protein-coding 625863068 LOC116885607 ribosomal L1 domain-containing protein 1-like 1 214808593 214809436 + 116885607 MODEL JAAIVD010000025 pseudo 625863069 Tns2 tensin 2 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); collagen metabolic process (ortholog); kidney development (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); Pierson syndrome (ortholog); FOUND IN focal adhesion (ortholog) 1 260957940 260972013 - 22301074;30032202 116883626 MODEL JAAIVD010000025;XM_032884818 XP_032740709 tensin-2 protein-coding 625863102 LOC116900399 olfactory receptor 4P4-like 5 70025807 70026749 - 22301074 116900399 MODEL JAAIVD010000023;XM_032902146 XP_032758037 protein-coding 625863106 Rpl18a ribosomal protein L18a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to antineoplastic agent (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 13 13139771 13140727 - 22301074;30032202;7654221 116914794 MODEL JAAIVD010000008;X14181;XM_032919241 CAA32385;XP_032775132 60S ribosomal protein L18a protein-coding 625863114 LOC116903841 amiloride-sensitive amine oxidase [copper-containing] 6 92095749 92102157 - 22301074;30032202 116903841 MODEL JAAIVD010000024;XM_032906557;XM_032906559;XM_032906560 XP_032762448;XP_032762450;XP_032762451 protein-coding 625863130 LOC116897369 polycomb group RING finger protein 6-like 1 37174550 37175363 + 116897369 MODEL JAAIVD010000025 pseudo 625863131 LOC116908239 aldose reductase-related protein 2-like 8 84364651 84432390 + 116908239 MODEL JAAIVD010000027 pseudo 625863132 Colq collagen like tail subunit of asymmetric acetylcholinesterase ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); regulation of synaptic assembly at neuromuscular junction (ortholog); skeletal muscle acetylcholine-gated channel clustering (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 5 (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 13 7247179 7283609 - 30032202 116914487 MODEL JAAIVD010000008;XM_032918799 XP_032774690 acetylcholinesterase collagenic tail peptide protein-coding 625863152 Eif1ax eukaryotic translation initiation factor 1A X-linked INVOLVED IN ribosome assembly (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH multiple myeloma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog); multi-eIF complex (ortholog) X 33870231 33884852 - 22301074;30032202 116887822 MODEL JAAIVD010000014;XM_032889341 XP_032745232 eukaryotic translation initiation factor 1A, X-chromosomal protein-coding 625863161 Ccdc127 coiled-coil domain containing 127 INVOLVED IN lipid homeostasis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 203777827 203784340 + 116892917 MODEL JAAIVD010000001;XM_032894844 XP_032750735 coiled-coil domain-containing protein 127 protein-coding 625863168 Nsun3 NOP2/Sun RNA methyltransferase 3 ENCODES a protein that exhibits tRNA (cytidine-5-)-methyltransferase activity (ortholog); INVOLVED IN regulation of mitochondrial translation (ortholog); tRNA wobble base cytosine methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 48 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 46397618 46458814 - 22301074;30032202 116898927 MODEL JAAIVD010000003;XM_032900335 XP_032756226 tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial protein-coding 625863178 Col11a1 collagen type XI alpha 1 chain ENCODES a protein that exhibits heparan sulfate binding (ortholog); heparin binding (ortholog); INVOLVED IN cartilage condensation (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); angle-closure glaucoma (ortholog); autistic disorder (ortholog); FOUND IN collagen trimer (ortholog); collagen type II trimer (ortholog); collagen type XI trimer (ortholog) 3 45375548 45565416 - 22301074;30032202 116896343 MODEL JAAIVD010000012;XM_032897445 XP_032753336 collagen alpha-1(XI) chain protein-coding 625863249 Fa2h fatty acid 2-hydroxylase ENCODES a protein that exhibits 4-hydroxysphinganine ceramide fatty acyl 2-hydroxylase activity (ortholog); fatty acid 2-hydroxylase activity (ortholog); free fatty acid 2-hydroxylase activity (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 35 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 17 31043207 31093673 - 22301074;30032202 116886328 MODEL JAAIVD010000011;XM_032887777 XP_032743668 protein-coding 625863260 Tmem176b transmembrane protein 176B INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog) 6 92151874 92159696 + 22301074;30032202 116903842 MODEL JAAIVD010000024;XM_032906561;XM_032906562;XM_032906563;XM_032906564;XM_032906565;XM_032906566;XM_032906567;XM_032906568;XM_032906569 XP_032762452;XP_032762453;XP_032762454;XP_032762455;XP_032762456;XP_032762457;XP_032762458;XP_032762459;XP_032762460 protein-coding 625863297 Bmp15 bone morphogenetic protein 15 INVOLVED IN ovarian cumulus expansion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) X 16445005 16449830 + 22301074;30032202 116889341 MODEL JAAIVD010000014;XM_032890456 XP_032746347 protein-coding 625863301 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 68687246 68687318 - 116910785 MODEL JAAIVD010000002 trna 625863302 Hyi hydroxypyruvate isomerase (putative) 1 38663761 38666369 - 30032202 116897831 MODEL JAAIVD010000025;XM_032899251 XP_032755142 putative hydroxypyruvate isomerase protein-coding 625863314 LOC116898136 60S ribosomal protein L7a-like 4 112246122 112246924 - 116898136 MODEL JAAIVD010000003 pseudo 625863315 LOC116892000 vomeronasal type-2 receptor 116-like 2 134741131 134748510 + 22301074;30032202 116892000 MODEL JAAIVD010000001;XM_032893454;XM_032893455;XM_032893456 XP_032749345;XP_032749346;XP_032749347 protein-coding 625863329 Tmem68 transmembrane protein 68 ENCODES a protein that exhibits phospholipid:diacylglycerol acyltransferase activity (ortholog); INVOLVED IN triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 73191609 73210191 + 22301074;30032202 116905091 MODEL JAAIVD010000026;XM_032907815 XP_032763706 protein-coding 625863339 LOC116887571 uncharacterized LOC116887571 18 4344057 4356158 + 116887571 MODEL JAAIVD010000013 pseudo 625863340 Mlxip MLX interacting protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 30394532 30452883 - 22301074;30032202 116885195 MODEL JAAIVD010000004;XM_032886415 XP_032742306 MLX-interacting protein protein-coding 625863361 LOC116887771 U7 small nuclear RNA 18 24085123 24085183 + 116887771 MODEL JAAIVD010000013;XR_004386268 snrna 625863364 LOC116906627 28S ribosomal protein S16, mitochondrial-like 8 56595411 56595836 - 116906627 MODEL JAAIVD010000027 pseudo 625863365 Bicdl2 BICD family like cargo adaptor 2 ENCODES a protein that exhibits small GTPase binding (ortholog) 9 967171 975519 + 30032202 116908951 MODEL JAAIVD010000002;XM_032912411 XP_032768302 BICD family-like cargo adapter 2 protein-coding 625863379 LOC116910699 small nucleolar RNA SNORA48 9 52583422 52583561 - 116910699 MODEL JAAIVD010000002;XR_004389227 snorna 625863382 LOC116884932 ADP/ATP translocase 2-like 15 16969829 16970663 + 116884932 MODEL JAAIVD010000010 pseudo 625863383 LOC116887842 F-box-like/WD repeat-containing protein TBL1X X 39876687 39879500 + 22301074;30032202 116887842 MODEL JAAIVD010000014;XM_032889351 XP_032745242 protein-coding 625863390 Ints9 integrator complex subunit 9 INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA 3'-end processing (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) 12 59375718 59460661 - 30032202 116913956 MODEL JAAIVD010000007;XM_032918222 XP_032774113 protein-coding 625863411 LOC116893630 ubiquitin-60S ribosomal protein L40-like 2 9084645 9085043 - 22301074;30032202 116893630 MODEL JAAIVD010000001;XM_032895343 XP_032751234 protein-coding 625863415 LOC116893306 nocturnin-like 2 151558573 151561076 + 30032202 116893306 MODEL JAAIVD010000001;XM_032895132 XP_032751023 protein-coding 625863420 LOC116913280 glyceraldehyde-3-phosphate dehydrogenase-like 12 87192359 87201344 - 116913280 MODEL JAAIVD010000007 pseudo 625863421 LOC116908154 cytochrome b-c1 complex subunit 7-like 1 170241352 170242116 - 116908154 MODEL JAAIVD010000025 pseudo 625863422 Batf basic leucine zipper ATF-like transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); DNA damage response (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 99802463 99825170 + 22301074;30032202 116905818 MODEL JAAIVD010000026;XM_032908785 XP_032764676 basic leucine zipper transcriptional factor ATF-like protein-coding 625863429 LOC116886598 ATP-dependent RNA helicase DDX3X-like 17 8217070 8217862 - 116886598 MODEL JAAIVD010000011 pseudo 625863430 Hand1 heart and neural crest derivatives expressed 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); blastocyst development (ortholog); cardiac left ventricle formation (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); hypoplastic left heart syndrome (ortholog); Poisoning (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 40401962 40404527 + 22301074;30032202 116909797 MODEL JAAIVD010000002;XM_032913491 XP_032769382 heart- and neural crest derivatives-expressed protein 1 protein-coding 625863436 Hip1r huntingtin interacting protein 1 related ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); clathrin adaptor activity (ortholog); INVOLVED IN clathrin coat assembly (ortholog); digestive system development (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN apical plasma membrane (ortholog); cell cortex (ortholog); clathrin-coated pit (ortholog) 16 29857819 29886180 - 30032202 116885957 MODEL JAAIVD010000004;XM_032887273;XM_032887274 XP_032743164;XP_032743165 huntingtin-interacting protein 1-related protein protein-coding 625863476 Pth parathyroid hormone ENCODES a protein that exhibits hormone activity (ortholog); parathyroid hormone receptor binding (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular space (ortholog) 2 88133074 88136091 + 22301074;30032202 116893939 MODEL JAAIVD010000001;XM_032895658 XP_032751549 protein-coding 625863483 LOC116903728 prohibitin-like 6 12222289 12225045 + 116903728 MODEL JAAIVD010000024 pseudo 625863484 Zc3hav1l ZC3HAV1 like FOUND IN cytosol (ortholog) 6 101528335 101535152 + 22301074 116903952 MODEL JAAIVD010000024;XM_032906738 XP_032762629 zinc finger CCCH-type antiviral protein 1-like;zinc finger CCCH-type containing, antiviral 1 like protein-coding 625863492 LOC116906236 uncharacterized LOC116906236 1 156016663 156018839 - 116906236 MODEL JAAIVD010000025;XR_004388588 ncrna 625863497 LOC116894504 zinc finger protein 541-like 2 172981039 172990671 - 30032202 116894504 MODEL JAAIVD010000001;XM_032896208 XP_032752099 protein-coding 625863510 Drd4 dopamine receptor D4 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); INVOLVED IN adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; excitatory synaptic transmission pathway; ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) 2 8183864 8187103 - 22301074;30032202 116893620 MODEL JAAIVD010000001;XM_032895333;XM_032895334 XP_032751224;XP_032751225 D(4) dopamine receptor protein-coding 625863522 LOC116884798 cytochrome P450 4A12 15 71628565 71662914 + 22301074;30032202 116884798 MODEL JAAIVD010000010;XM_032886032;XM_032886033;XM_032886034 XP_032741923;XP_032741924;XP_032741925 protein-coding 625863545 LOC116887618 von Hippel-Lindau disease tumor suppressor-like 18 10123407 10124081 - 116887618 MODEL JAAIVD010000013;XM_032889224 XP_032745115 protein-coding 625863548 Mst1 macrophage stimulating 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone kinase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to type II interferon (ortholog); embryo implantation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Crohn's disease (ortholog); FOUND IN extracellular space (ortholog); vacuole (ortholog) 8 99409868 99414439 + 22301074;30032202 116907181 MODEL JAAIVD010000027;XM_032910140;XM_032910141 XP_032766031;XP_032766032 hepatocyte growth factor-like protein protein-coding 625863575 Clrn3 clarin 3 2 66392359 66408548 + 116891380 MODEL JAAIVD010000001;XM_032892394 XP_032748285 clarin-3 protein-coding 625863582 Nhsl3 NHS like 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 28893765 28922993 + 30032202 116896204 MODEL JAAIVD010000025;XM_032897256;XM_032897265;XM_032897273 XP_032753147;XP_032753156;XP_032753164 Kiaa1522 uncharacterized protein KIAA1522 homolog protein-coding 625863599 LOC116896073 elongation factor 1-delta-like 3 210686440 210686888 + 116896073 MODEL JAAIVD010000012 pseudo 625863600 Galk1 galactokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); galactokinase activity (ortholog); galactose binding (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); galactitol metabolic process (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH cataract (ortholog); COVID-19 (ortholog); galactokinase deficiency (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 9 68047335 68051514 + 22301074;30032202 116908738 MODEL JAAIVD010000002;XM_032912085 XP_032767976 galactokinase protein-coding 625863612 LOC116884785 aminomethyltransferase, mitochondrial-like 15 78588099 78589300 + 116884785 MODEL JAAIVD010000010 pseudo 625863613 Kif27 kinesin family member 27 INVOLVED IN cilium assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN cilium (ortholog) 14 79768763 79842418 + 22301074;30032202 116883760 MODEL JAAIVD010000009;XM_032885006 XP_032740897 kinesin-like protein KIF27 protein-coding 625863636 Rel REL proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of interferon-beta production (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atrophic gastritis (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 93202509 93228653 + 22301074;30032202 116912832 MODEL JAAIVD010000006;XM_032917019 XP_032772910 proto-oncogene c-Rel protein-coding 625863650 LOC116895556 eukaryotic translation initiation factor 4E-like 3 124940792 124941576 - 116895556 MODEL JAAIVD010000012 pseudo 625863651 LOC116898963 60S ribosomal protein L11-like 4 50132085 50132707 - 116898963 MODEL JAAIVD010000003 pseudo 625863652 LOC116894181 olfactory receptor 481-like 2 105950369 105951310 - 22301074;30032202 116894181 MODEL JAAIVD010000001;XM_032895898 XP_032751789 protein-coding 625863656 Tcl1a TCL1 family AKT coactivator A ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); intracellular signal transduction (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 122886168 122892171 - 22301074;30032202 116905984 MODEL JAAIVD010000026;XM_032909007 XP_032764898 T cell leukemia/lymphoma 1A;T-cell leukemia/lymphoma protein 1A protein-coding 625863664 LOC116908361 small nucleolar RNA SNORA28 8 20238764 20238889 + 116908361 MODEL JAAIVD010000027;XR_004388911 snorna 625863667 Ndor1 NADPH dependent diflavin oxidoreductase 1 ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); FMN binding (ortholog); INVOLVED IN electron transport chain (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) 5 11926888 11934993 + 22301074;30032202 116901315 MODEL JAAIVD010000023;XM_032903126;XM_032903127;XR_004387976 XP_032759017;XP_032759018 NADPH-dependent diflavin oxidoreductase 1 protein-coding 625863692 Nacc2 NACC family member 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 5 10963553 11029870 + 22301074;30032202 116901279 MODEL JAAIVD010000023;XM_032903051 XP_032758942 nucleus accumbens-associated protein 2 protein-coding 625863702 Ush2a usherin ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); myosin binding (ortholog); INVOLVED IN establishment of localization in cell (ortholog); establishment of protein localization (ortholog); hair cell differentiation (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 36 (ortholog); Bardet-Biedl syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); ciliary basal body (ortholog) 10 66389009 67059300 + 22301074 116911492 MODEL JAAIVD010000005;XM_032915475 XP_032771366 protein-coding 625863777 LOC116913732 olfactory receptor 11H6-like 12 72855699 72858545 - 116913732 MODEL JAAIVD010000007 pseudo 625863778 Gpr20 G protein-coupled receptor 20 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 1 246458263 246468368 - 22301074;30032202 116912453 MODEL JAAIVD010000025;XM_032916524 XP_032772415 G-protein coupled receptor 20 protein-coding 625863784 LOC116911482 cytochrome c, somatic-like 10 10965473 10966349 - 116911482 MODEL JAAIVD010000005;XR_004389327 pseudo 625863787 LOC116910667 small nucleolar RNA SNORA69 9 52352945 52353078 - 116910667 MODEL JAAIVD010000002;XR_004389199 snorna 625863790 Capn12 calpain 12 2 167108955 167120174 - 22301074;30032202 116892368 MODEL JAAIVD010000001;XM_032894031 XP_032749922 calpain-12 protein-coding 625863815 Mpv17l2 MPV17 mitochondrial inner membrane protein like 2 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 12999339 13001717 - 22301074;30032202 116914422 MODEL JAAIVD010000008;XM_032918692 XP_032774583 mpv17-like protein 2 protein-coding 625863824 LOC116906378 small nucleolar RNA SNORD113/SNORD114 family 7 127262504 127262578 + 116906378 MODEL JAAIVD010000026;XR_004388648 snorna 625863827 Tmem186 transmembrane protein 186 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrion (ortholog) 9 13397537 13402312 + 30032202 116910438 MODEL JAAIVD010000002;XM_032914284;XM_032914286 XP_032770175;XP_032770177 protein-coding 625863836 LOC116893563 ceramide-1-phosphate transfer protein-like 2 217162169 217165765 - 116893563 MODEL JAAIVD010000001 pseudo 625863837 Zkscan5 zinc finger with KRAB and SCAN domains 5 16 8073592 8092674 - 30032202 116885935 MODEL JAAIVD010000004;XM_032887246;XM_032887247 XP_032743137;XP_032743138 zinc finger protein with KRAB and SCAN domains 5 protein-coding 625863851 Agbl3 AGBL carboxypeptidase 3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN protein side chain deglutamylation (ortholog) 6 104797926 104874448 - 22301074 116903973 MODEL JAAIVD010000024;XM_032906774;XM_032906775;XM_032906776;XM_032906777;XM_032906778;XM_032906779;XM_032906780;XM_032906781;XR_004388315;XR_004388316 XP_032762665;XP_032762666;XP_032762667;XP_032762668;XP_032762669;XP_032762670;XP_032762671;XP_032762672 ATP/GTP binding protein like 3;cytosolic carboxypeptidase 3 protein-coding 625863897 LOC116893960 uncharacterized LOC116893960 2 97995408 97998110 + 116893960 MODEL JAAIVD010000001;XR_004387018 ncrna 625863902 LOC116891144 cytochrome P450 2C7 2 38934934 38988058 + 22301074;30032202 116891144 MODEL JAAIVD010000001;X12595;XM_032891892;XM_032891893 CAA31108;XP_032747783;XP_032747784 cytochrome P-450 protein-coding 625863919 Ak8 adenylate kinase 8 ENCODES a protein that exhibits AMP binding (ortholog); AMP kinase activity (ortholog); dCMP kinase activity (ortholog); INVOLVED IN ventricular system development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); sperm flagellum (ortholog) 5 7860187 7974429 - 22301074;30032202 116901227 MODEL JAAIVD010000023;XM_032902964 XP_032758855 protein-coding 625863936 LOC116904805 U6 spliceosomal RNA 6 67684176 67684282 - 116904805 MODEL JAAIVD010000024;XR_004388457 snrna 625863939 Cdc14a cell division cycle 14A INVOLVED IN sensory perception of sound (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 32 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 3 43278928 43431615 + 22301074;30032202 116896333 MODEL JAAIVD010000012;XM_032897431;XM_032897432;XM_032897433 XP_032753322;XP_032753323;XP_032753324 dual specificity protein phosphatase CDC14A protein-coding 625863967 LOC116890213 keratin, type II cuticular Hb1-like 1 261633209 261639505 - 30032202 116890213 MODEL JAAIVD010000025;XM_032890949 XP_032746840 protein-coding 625863976 Pias1 protein inhibitor of activated STAT 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA double-strand break processing (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN aldosterone signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Brain Injuries (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear periphery (ortholog); nucleoplasm (ortholog) 8 57171731 57268595 - 22301074;30032202 116908045 MODEL JAAIVD010000027;XM_032911319 XP_032767210 E3 SUMO-protein ligase PIAS1 protein-coding 625863994 Ska1 spindle and kinetochore associated complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 57742036 57752298 + 22301074;30032202 116884510 MODEL JAAIVD010000010;XM_032885640 XP_032741531 spindle and kinetochore-associated protein 1 protein-coding 625864005 LOC116887770 glucose-induced degradation protein 8 homolog 1 57545174 57545861 + 116887770 MODEL JAAIVD010000025 pseudo 625864006 Ppp1r16b protein phosphatase 1 regulatory subunit 16B ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); FOUND IN cell projection (ortholog); nuclear speck (ortholog); nucleus (ortholog) 5 138012203 138106806 + 22301074;30032202 116902241 MODEL JAAIVD010000023;XM_032904658;XM_032904659 XP_032760549;XP_032760550 protein phosphatase 1 regulatory inhibitor subunit 16B protein-coding 625864024 Afg3l2 AFG3 like matrix AAA peptidase subunit 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN axonogenesis (ortholog); calcium import into the mitochondrion (ortholog); cellular response to glutathione (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); dystonia (ortholog); fundus dystrophy (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 15 63842239 63886299 + 22301074;30032202 116884994 MODEL JAAIVD010000010;XM_032886220 XP_032742111 AFG3-like protein 2 protein-coding 625864045 Cdk5r1 cyclin dependent kinase 5 regulatory subunit 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cadherin binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); brain development (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); brain disease (ortholog); FOUND IN axon (ortholog); contractile muscle fiber (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 9 89933526 89937616 - 22301074;30032202 116909421 MODEL JAAIVD010000002;XM_032912996 XP_032768887 cyclin-dependent kinase 5 activator 1 protein-coding 625864051 Slc11a2 solute carrier family 11 member 2 ENCODES a protein that exhibits cadmium ion binding (ortholog); cadmium ion transmembrane transporter activity (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); cellular response to hypoxia (ortholog); cellular response to iron ion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; iron uptake pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); anemia (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basal part of cell (ortholog) 1 262668273 262705975 + 22301074;30032202 116884041 MODEL JAAIVD010000025;XM_032885289 XP_032741180 natural resistance-associated macrophage protein 2 protein-coding 625864072 LOC116908683 ATP synthase subunit e, mitochondrial-like 9 93375602 93375816 + 116908683 MODEL JAAIVD010000002 pseudo 625864073 LOC116884412 60S ribosomal protein L13-like 15 71724180 71734616 - 116884412 MODEL JAAIVD010000010 pseudo 625864074 Gdf2 growth differentiation factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); hepatocellular carcinoma (ortholog); hereditary hemorrhagic telangiectasia (ortholog); FOUND IN extracellular space (ortholog) 13 9712166 9716335 + 22301074;30032202 116914272 MODEL JAAIVD010000008;XM_032918493 XP_032774384 growth/differentiation factor 2 protein-coding 625864078 LOC116910275 olfactory receptor 1361-like 9 38382446 38383390 - 116910275 MODEL JAAIVD010000002 pseudo 625864079 LOC116896198 guanylate-binding protein 5-like 3 18305949 18317063 - 22301074;30032202 116896198 MODEL JAAIVD010000012;XM_032897245 XP_032753136 protein-coding 625864093 Fhad1 forkhead associated phosphopeptide binding domain 1 INVOLVED IN apoptotic process (ortholog); spermatogenesis (ortholog); FOUND IN sperm flagellum (ortholog) 1 16154283 16273271 + 22301074 116893183 MODEL JAAIVD010000025;XM_032895089 XP_032750980 forkhead-associated domain-containing protein 1 protein-coding 625864130 LOC116909796 uncharacterized LOC116909796 9 46564769 46573859 + 116909796 MODEL JAAIVD010000002;XR_004389099 ncrna 625864134 LOC116908269 40S ribosomal protein S27-like 8 110667752 110678107 + 22301074;30032202 116908269 MODEL JAAIVD010000027;XM_032911518 XP_032767409 protein-coding 625864139 Fcer2 Fc fragment of IgE receptor II ENCODES a protein that exhibits IgE binding (ortholog); low-affinity IgE receptor activity (ortholog); protease binding (ortholog); INVOLVED IN B cell antigen processing and presentation (ortholog); defense response to bacterium (ortholog); Fc receptor-mediated immune complex endocytosis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH encephalitis (ortholog); human immunodeficiency virus infectious disease (ortholog); Immediate Hypersensitivity (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 16 1608545 1615541 - 116885423 MODEL JAAIVD010000004;XM_032886709 XP_032742600 low affinity immunoglobulin epsilon Fc receptor protein-coding 625864153 Gpr101 G protein-coupled receptor 101 ASSOCIATED WITH growth hormone secreting pituitary adenoma (ortholog); growth hormone secreting pituitary adenoma 2 (ortholog); FOUND IN receptor complex (ortholog) X 39210379 39214569 - 22301074;30032202 116888745 MODEL JAAIVD010000014;XM_032890040 XP_032745931 probable G-protein coupled receptor 101 protein-coding 625864159 LOC116889098 protein BEX2 X 87463514 87464564 + 30032202 116889098 MODEL JAAIVD010000014;XM_032890267 XP_032746158 protein-coding 625864165 Cldn14 claudin 14 ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness 29 (ortholog); Deafness (ortholog); FOUND IN bicellular tight junction (ortholog); plasma membrane (ortholog) 4 50723492 50733743 + 30032202 116897969 MODEL JAAIVD010000003;XM_032899369 XP_032755260 claudin-14 protein-coding 625864171 Cntd1 cyclin N-terminal domain containing 1 INVOLVED IN reciprocal meiotic recombination (ortholog); regulation of meiotic cell cycle (ortholog); spermatogenesis (ortholog); FOUND IN chromosome (ortholog) 9 60583092 60592287 + 30032202 116910177 MODEL JAAIVD010000002;XM_032914036;XM_032914037 XP_032769927;XP_032769928 cyclin N-terminal domain-containing protein 1 protein-coding 625864185 Mtm1 myotubularin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); intermediate filament organization (ortholog); mitochondrion distribution (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy (ortholog); centronuclear myopathy X-linked (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); filopodium (ortholog) 7 353311 370899 - 22301074;30032202 116905728 MODEL JAAIVD010000026;XM_032908696;XM_032908697 XP_032764587;XP_032764588 myotubularin protein-coding 625864208 Poc1b POC1 centriolar protein B INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 20 (ortholog); fundus dystrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 178225752 178322352 + 22301074;30032202 116908571 MODEL JAAIVD010000025;XM_032911782 XP_032767673 POC1 centriolar protein homolog B protein-coding 625864224 LOC116902579 U1 spliceosomal RNA 5 3276516 3276671 + 116902579 MODEL JAAIVD010000023;XR_004388172 snrna 625864227 Fam149a family with sequence similarity 149 member A 13 42455386 42507318 + 116914670 MODEL JAAIVD010000008;XM_032919075 XP_032774966 protein FAM149A protein-coding 625864244 Cd40lg CD40 ligand ENCODES a protein that exhibits CD40 receptor binding (ortholog); cytokine activity (ortholog); integrin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); CD40 signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; obesity pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) X 117649712 117661154 + 22301074 116888835 MODEL JAAIVD010000014;XM_032890109 XP_032746000 protein-coding 625864251 LOC116897732 40S ribosomal protein S12-like 4 94953836 94954499 + 116897732 MODEL JAAIVD010000003 pseudo 625864252 Vti1b vesicle transport through interaction with t-SNAREs 1B ENCODES a protein that exhibits chloride channel inhibitor activity (ortholog); SNARE binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); regulation of protein localization to plasma membrane (ortholog); FOUND IN early endosome membrane (ortholog); Golgi apparatus (ortholog); late endosome membrane (ortholog) 7 93263255 93278483 - 22301074;30032202 116905204 MODEL JAAIVD010000026;XM_032908016;XM_032908017 XP_032763907;XP_032763908 vesicle transport through interaction with t-SNAREs homolog 1B protein-coding 625864266 LOC116915147 small nucleolar RNA SNORD69 13 6714506 6714585 - 116915147 MODEL JAAIVD010000008;XR_004389817 snorna 625864269 LOC116900553 olfactory receptor 4K14-like 5 89886713 89887654 - 22301074 116900553 MODEL JAAIVD010000023;XM_032902279 XP_032758170 protein-coding 625864273 Trak1 trafficking kinesin protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 68 (ortholog); genetic disease (ortholog); schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) 8 112540352 112634007 + 30032202 116907967 MODEL JAAIVD010000027;XM_032911194 XP_032767085 trafficking kinesin-binding protein 1 protein-coding 625864293 Znf704 zinc finger protein 704 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 3 143511243 143685794 - 30032202 116897029 MODEL JAAIVD010000012;XM_032898647 XP_032754538 protein-coding 625864306 LOC116908285 gamma-secretase subunit APH-1B-like 8 61178749 61195924 - 22301074;30032202 116908285 MODEL JAAIVD010000027;XM_032911545 XP_032767436 protein-coding 625864316 Dnajc15 DnaJ heat shock protein family (Hsp40) member C15 INVOLVED IN cellular response to starvation (ortholog); negative regulation of mitochondrial electron transport, NADH to ubiquinone (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 12 46538325 46597531 + 30032202 116913413 MODEL JAAIVD010000007;XM_032917597 XP_032773488 dnaJ homolog subfamily C member 15 protein-coding 625864326 LOC116884890 60S ribosomal protein L21-like 15 60462028 60463636 - 116884890 MODEL JAAIVD010000010 pseudo 625864327 Mpdz multiple PDZ domain crumbs cell polarity complex component INVOLVED IN cell adhesion (ortholog); dendrite development (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 21 (ortholog); Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 1 72186554 72333973 + 22301074 116900731 MODEL JAAIVD010000025;XM_032902440 XP_032758331 multiple PDZ domain protein protein-coding 625864379 Slc35d2 solute carrier family 35 member D2 ENCODES a protein that exhibits nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 14 75421391 75454909 + 30032202 116883721 MODEL JAAIVD010000009;XM_032884944 XP_032740835 UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter protein-coding 625864395 LOC116892239 RNA-binding protein with serine-rich domain 1-like 2 18469861 18575973 + 116892239 MODEL JAAIVD010000001 pseudo 625864396 Smim10l1 small integral membrane protein 10 like 1 FOUND IN mitochondrion (ortholog) 6 15712010 15715266 - 116903180 MODEL JAAIVD010000024;XM_032905550 XP_032761441 small integral membrane protein 10-like protein 1 protein-coding 625864402 Parp14 poly(ADP-ribose) polymerase family member 14 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN NAD+ catabolic process (ortholog); negative regulation of gene expression (ortholog); negative regulation of type II interferon-mediated signaling pathway (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; interleukin-4 signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 4 20608169 20639726 - 22301074;30032202 116898813 MODEL JAAIVD010000003;XM_032900165;XM_032900166 XP_032756056;XP_032756057 protein mono-ADP-ribosyltransferase PARP14 protein-coding 625864426 Kdm1b lysine demethylase 1B ENCODES a protein that exhibits FAD binding (ortholog); FAD-dependent H3K4me/H3K4me3 demethylase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epigenetic programing of female pronucleus (ortholog); genomic imprinting (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); retinoblastoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 14 66036583 66075921 + 22301074;30032202 116883369 MODEL JAAIVD010000009;XM_032884483 XP_032740374 lysine-specific histone demethylase 1B protein-coding 625864451 LOC116898313 clusterin-associated protein 1-like 4 37000233 37023171 + 116898313 MODEL JAAIVD010000003 pseudo 625864452 Fmn2 formin 2 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 47 (ortholog); genetic disease (ortholog); Hirschsprung's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); cytoplasmic vesicle membrane (ortholog) 10 53089979 53399429 + 22301074;30032202 116911021 MODEL JAAIVD010000005;XM_032914755 XP_032770646 formin-2 protein-coding 625864474 LOC116883653 uncharacterized LOC116883653 14 61025617 61095389 + 116883653 MODEL JAAIVD010000009;XR_004385777 ncrna 625864479 Gde1 glycerophosphodiester phosphodiesterase 1 ENCODES a protein that exhibits glycerophosphodiester phosphodiesterase activity (ortholog); glycerophosphoinositol glycerophosphodiesterase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN ethanolamine metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 82946849 82962299 + 22301074 116891607 MODEL JAAIVD010000001;XM_032892806 XP_032748697 protein-coding 625864489 Frem2 FRAS1 related extracellular matrix 2 INVOLVED IN cell adhesion (ortholog); embryonic digit morphogenesis (ortholog); eye development (ortholog); ASSOCIATED WITH CAKUT (ortholog); Childhood Schizophrenia (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN basement membrane (ortholog) 3 100785571 100925320 + 22301074 116896877 MODEL JAAIVD010000012;XM_032898423 XP_032754314 FRAS1-related extracellular matrix protein 2 protein-coding 625864516 LOC116894220 olfactory receptor 510-like 2 106687193 106688137 + 22301074;30032202 116894220 MODEL JAAIVD010000001;XM_032895931 XP_032751822 protein-coding 625864519 LOC116906363 small nucleolar RNA SNORD113/SNORD114 family 7 127205492 127205572 + 116906363 MODEL JAAIVD010000026 pseudo 625864520 LOC116885803 CD209 antigen-like protein E 16 2208494 2211493 + 116885803 MODEL JAAIVD010000004;XM_032887137 XP_032743028 protein-coding 625864531 Mtres1 mitochondrial transcription rescue factor 1 ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); RNA binding (ortholog); tRNA binding (ortholog); INVOLVED IN regulation of mitochondrial transcription (ortholog); rescue of stalled ribosome (ortholog); FOUND IN mitochondrial matrix (ortholog) 18 43239757 43257603 - 116887166 MODEL JAAIVD010000013;XM_032888716;XM_032888717 XP_032744607;XP_032744608 protein-coding 625864543 Gabrp gamma-aminobutyric acid type A receptor subunit pi ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); FOUND IN plasma membrane (ortholog) 9 6363133 6388983 - 22301074;30032202 116909093 MODEL JAAIVD010000002;XM_032912563;XM_032912564 XP_032768454;XP_032768455 gamma-aminobutyric acid receptor subunit pi protein-coding 625864563 LOC116902760 macrophage migration inhibitory factor-like 6 47230527 47230874 + 30032202 116902760 MODEL JAAIVD010000024;XM_032905108 XP_032760999 protein-coding 625864566 LOC116910933 60S ribosomal protein L29-like 10 65588900 65589244 + 116910933 MODEL JAAIVD010000005;XM_032914679 XP_032770570 protein-coding 625864569 LOC116888545 40S ribosomal protein S2-like X 8481597 8482310 - 116888545 MODEL JAAIVD010000014 pseudo 625864570 LOC116887486 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9266243 9269828 - 30032202 116887486 MODEL JAAIVD010000013;XM_032889110 XP_032745001 protein-coding 625864581 LOC116886307 uncharacterized LOC116886307 17 28250691 28252233 - 116886307 MODEL JAAIVD010000011;XR_004386097 ncrna 625864585 Usp13 ubiquitin specific peptidase 13 ENCODES a protein that exhibits BAT3 complex binding (ortholog); cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); maintenance of unfolded protein (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog) 3 122097232 122201045 - 22301074 116896958 MODEL JAAIVD010000012;XM_032898534;XR_004387385 XP_032754425 ubiquitin carboxyl-terminal hydrolase 13 protein-coding 625864614 Rrh retinal pigment epithelium-derived rhodopsin homolog 3 29480714 29494886 + 22301074;30032202 116896265 MODEL JAAIVD010000012;XM_032897341 XP_032753232 visual pigment-like receptor peropsin protein-coding 625864625 LOC116889820 small nucleolar RNA SNORD116 116889820 MODEL JAAIVD010001126;XR_004386511 snorna 625864626 Commd5 COMM domain containing 5 INVOLVED IN positive regulation of cell growth (ortholog); positive regulation of epithelial cell differentiation (ortholog); proximal tubule morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 249227631 249229037 + 30032202 116913461 MODEL JAAIVD010000025;XM_032917666;XM_032917672;XM_032917678;XM_032917684;XM_032917692 XP_032773557;XP_032773563;XP_032773569;XP_032773575;XP_032773583 COMM domain-containing protein 5 protein-coding 625864645 Pdlim2 PDZ and LIM domain 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); filamin binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN protein catabolic process (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); stress fiber (ortholog) 12 54171581 54190207 + 30032202 116913623 MODEL JAAIVD010000007;XM_032917884;XM_032917885;XM_032917886;XM_032917887 XP_032773775;XP_032773776;XP_032773777;XP_032773778 PDZ and LIM domain protein 2 protein-coding 625864670 LOC116908206 nucleoporin NUP35-like 8 67105775 67106743 - 116908206 MODEL JAAIVD010000027 pseudo 625864671 Nbl1 NBL1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); morphogen activity (ortholog); INVOLVED IN determination of dorsal identity (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of monocyte chemotaxis (ortholog); FOUND IN extracellular space (ortholog) 1 19108493 19119710 + 30032202 116893763 MODEL JAAIVD010000025;XM_032895469 XP_032751360 neuroblastoma suppressor of tumorigenicity 1 protein-coding 625864679 LOC116905610 glyceraldehyde-3-phosphate dehydrogenase-like 7 13736283 13755652 + 116905610 MODEL JAAIVD010000026 pseudo 625864680 Slc25a11 solute carrier family 25 member 11 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); oxoglutarate:malate antiporter activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); malate-aspartate shuttle (ortholog); PARTICIPATES IN fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; glycogen storage disease type Ia pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Paragangliomas 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 50255146 50257992 - 30032202 116910491 MODEL JAAIVD010000002;XM_032914382 XP_032770273 mitochondrial 2-oxoglutarate/malate carrier protein protein-coding 625864692 LOC116895871 rho GTPase-activating protein 20-like 3 105089825 105121571 - 22301074;30032202 116895871 MODEL JAAIVD010000012;XM_032896970 XP_032752861 protein-coding 625864707 LOC116897740 hypoxanthine-guanine phosphoribosyltransferase-like 4 175405513 175411218 - 116897740 MODEL JAAIVD010000003 pseudo 625864708 Ubxn8 UBX domain protein 8 INVOLVED IN ERAD pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleolus (ortholog) 13 53374848 53394749 + 30032202 116914709 MODEL JAAIVD010000008;XM_032919139 XP_032775030 UBX domain-containing protein 8 protein-coding 625864720 Pcolce procollagen C-endopeptidase enhancer ENCODES a protein that exhibits collagen binding (ortholog); heparin binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); proteolysis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); liver cirrhosis (ortholog) 16 16410923 16417648 + 22301074 116885763 MODEL JAAIVD010000004;XM_032887081 XP_032742972 procollagen C-endopeptidase enhancer 1 protein-coding 625864733 Dnajc8 DnaJ heat shock protein family (Hsp40) member C8 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog) 1 25684379 25702122 - 30032202 116895455 MODEL JAAIVD010000025;XM_032896727 XP_032752618 dnaJ homolog subfamily C member 8 protein-coding 625864746 Trnas-cga transfer RNA serine (anticodon CGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 155924358 155924439 - 116890644 MODEL JAAIVD010000025 trna 625864747 Col15a1 collagen type XV alpha 1 chain PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog) 1 100337644 100407534 + 30032202 116898918 MODEL JAAIVD010000025;XM_032900364 XP_032756255 collagen alpha-1(XV) chain protein-coding 625864789 LOC116905533 protein FAM167B-like 7 76243713 76244158 - 116905533 MODEL JAAIVD010000026 pseudo 625864790 Crybb2 crystallin beta B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of eye lens (ortholog); INVOLVED IN camera-type eye development (ortholog); visual perception (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 3 multiple types (ortholog) 16 40909927 40919533 + 30032202 116885479 MODEL JAAIVD010000004;XM_032886768 XP_032742659 beta-crystallin B2 protein-coding 625864799 Anxa1 annexin A1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell differentiation (ortholog); arachidonate secretion (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); asthma (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 2 20396186 20412032 - 22301074;30032202 116891023 MODEL JAAIVD010000001;XM_032891703 XP_032747594 protein-coding 625864816 Pcnx3 pecanex 3 ASSOCIATED WITH systemic lupus erythematosus (ortholog) 2 2007914 2029823 + 22301074 116890699 MODEL JAAIVD010000001;XM_032891118;XM_032891119;XM_032891121;XM_032891122;XM_032891123 XP_032747009;XP_032747010;XP_032747012;XP_032747013;XP_032747014 pecanex-like protein 3 protein-coding 625864862 LOC116912744 zinc finger protein 431-like 11 14706093 14776292 - 30032202 116912744 MODEL JAAIVD010000006;XM_032916888;XM_032916889;XM_032916890;XM_032916891;XM_032916892;XM_032916893 XP_032772779;XP_032772780;XP_032772781;XP_032772782;XP_032772783;XP_032772784 zinc finger protein 120-like protein-coding 625864893 LOC116899614 uncharacterized LOC116899614 4 159961502 159967067 - 116899614 MODEL JAAIVD010000003;XR_004387746 ncrna 625864898 LOC116890227 translationally-controlled tumor protein-like 1 270266060 270266549 - 116890227 MODEL JAAIVD010000025 pseudo 625864899 Rcan2 regulator of calcineurin 2 INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); locomotion involved in locomotory behavior (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH metabolic dysfunction-associated steatotic liver disease (ortholog) 4 85827742 86044813 - 22301074;30032202 116899145 MODEL JAAIVD010000003;XM_032900686;XM_032900687 XP_032756577;XP_032756578 calcipressin-2 protein-coding 625864911 LOC116905567 protein BEX4-like 7 89500553 89502054 - 116905567 MODEL JAAIVD010000026 pseudo 625864912 Id1 inhibitor of DNA binding 1, HLH protein ENCODES a protein that exhibits identical protein binding (ortholog); proteasome binding (ortholog); transcription factor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-abiotic substrate adhesion (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; ASSOCIATED WITH cholestasis (ortholog); disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 5 132063621 132064787 + 22301074;30032202 116902126 MODEL JAAIVD010000023;XM_032904442;XM_032904443 XP_032760333;XP_032760334 DNA-binding protein inhibitor ID-1 protein-coding 625864922 LOC116895007 small nucleolar RNA SNORA48 2 72068311 72068454 + 116895007 MODEL JAAIVD010000001;XR_004387195 snorna 625864925 Erc2 ELKS/RAB6-interacting/CAST family member 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); synapse organization (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi-associated vesicle (ortholog) 13 3343360 4227341 + 30032202 116914409 MODEL JAAIVD010000008;XM_032918651;XM_032918652;XM_032918653;XM_032918654;XM_032918655;XM_032918656;XM_032918657;XM_032918658;XM_032918660;XM_032918661;XM_032918662;XM_032918663;XM_032918664;XM_032918665;XM_032918666;XM_032918667;XM_032918668;XR_004389747 XP_032774542;XP_032774543;XP_032774544;XP_032774545;XP_032774546;XP_032774547;XP_032774548;XP_032774549;XP_032774551;XP_032774552;XP_032774553;XP_032774554;XP_032774555;XP_032774556;XP_032774557;XP_032774558;XP_032774559 ERC protein 2 protein-coding 625864981 Gpx2 glutathione peroxidase 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); negative regulation of inflammatory response to antigenic stimulus (ortholog); response to salicylic acid (ortholog); ASSOCIATED WITH alcoholic gastritis (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); mitotic spindle (ortholog) 7 90925119 90928234 - 22301074;30032202 116905188 MODEL JAAIVD010000026;XM_032907978 XP_032763869 protein-coding 625864987 LOC116897858 dynein light chain 1, cytoplasmic-like 4 18620394 18620657 - 116897858 MODEL JAAIVD010000003 pseudo 625864988 LOC116908715 uncharacterized LOC116908715 9 64934976 64936765 - 116908715 MODEL JAAIVD010000002;XR_004389015 ncrna 625864993 LOC116889682 ribosome-binding ATPase YchF-like 22301074;30032202 116889682 MODEL JAAIVD010000051;XM_032890571 XP_032746462 protein-coding 625864994 Cdkal1 CDKAL1 threonylcarbamoyladenosine tRNA methylthiotransferase ENCODES a protein that exhibits tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase activity (ortholog); INVOLVED IN maintenance of translational fidelity (ortholog); tRNA methylthiolation (ortholog); ASSOCIATED WITH Birth Weight (ortholog); Body Weight (ortholog); diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); rough endoplasmic reticulum (ortholog) 14 48501711 48769138 - 22301074;30032202 116883220 MODEL JAAIVD010000009;XM_032884235 XP_032740126 CDK5 regulatory subunit associated protein 1 like 1;threonylcarbamoyladenosine tRNA methylthiotransferase protein-coding 625865006 LOC116912708 uncharacterized LOC116912708 1 173452177 173473491 - 116912708 MODEL JAAIVD010000025 pseudo 625865007 LOC116906434 small nucleolar RNA SNORA48 7 46143200 46143343 - 116906434 MODEL JAAIVD010000026;XR_004388694 snorna 625865010 LOC116888824 uncharacterized LOC116888824 X 6395438 6398950 + 116888824 MODEL JAAIVD010000014 pseudo 625865011 Rhot2 ras homolog family member T2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); GDP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); mitochondrial outer membrane permeabilization (ortholog); mitochondrion transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 3104812 3109667 - 22301074;30032202 116908548 MODEL JAAIVD010000002;XM_032911748 XP_032767639 mitochondrial Rho GTPase 2 protein-coding 625865034 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889713 MODEL JAAIVD010000060 trna 625865035 C14H6orf120 chromosome 14 C6orf120 homolog 14 990893 993086 - 116884007 MODEL JAAIVD010000009;XM_032885244;XM_032885245;XM_032885246 XP_032741135;XP_032741136;XP_032741137 UPF0669 protein C6orf120 homolog protein-coding 625865049 LOC116909251 dedicator of cytokinesis protein 2 9 7309235 7458043 - 30032202 116909251 MODEL JAAIVD010000002;XM_032912772 XP_032768663 protein-coding 625865079 Gucy2d guanylate cyclase 2D, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); cGMP-mediated signaling (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH choroidal sclerosis (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); photoreceptor outer segment (ortholog); photoreceptor outer segment membrane (ortholog) 9 48847463 48862705 - 22301074;30032202 116909633 MODEL JAAIVD010000002;XM_032913274 XP_032769165 retinal guanylyl cyclase 1 protein-coding 625865103 LOC116893692 olfactory receptor 5B2-like 2 12953713 12954633 - 22301074;30032202 116893692 MODEL JAAIVD010000001;XM_032895408 XP_032751299 protein-coding 625865106 Catsperz catsper channel auxiliary subunit zeta INVOLVED IN flagellated sperm motility (ortholog); male meiotic nuclear division (ortholog); sperm capacitation (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm principal piece (ortholog) 2 868572 872168 + 30032202 116894778 MODEL JAAIVD010000001;XM_032896431 XP_032752322 cation channel sperm-associated protein subunit zeta protein-coding 625865114 Neurog1 neurogenin 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); E-box binding (ortholog); INVOLVED IN auditory behavior (ortholog); cell fate commitment (ortholog); cochlea development (ortholog); ASSOCIATED WITH CRANIAL DYSINNERVATION DISORDER, CONGENITAL, WITH ABSENT CORNEAL REFLEX AND DEVELOPMENTAL DELAY (ortholog); FOUND IN neuronal cell body (ortholog); perikaryon (ortholog) 14 81828153 81829668 + 22301074 116915208 MODEL JAAIVD010000009;XM_032919578 XP_032775469 neurogenin-1 protein-coding 625865119 Mgat4b alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase B ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN protein glycosylation (ortholog); protein N-linked glycosylation (ortholog) 9 32889628 32899382 + 30032202 116909514 MODEL JAAIVD010000002;XM_032913119;XM_032913120 XP_032769010;XP_032769011 protein-coding 625865142 LOC116885187 protein POLR1D-like 16 6760888 6793652 - 116885187 MODEL JAAIVD010000004;XM_032886405 XP_032742296 protein-coding 625865149 Copg1 coat protein complex I subunit gamma 1 INVOLVED IN establishment of Golgi localization (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH combined immunodeficiency (ortholog); immunodeficiency 128 (ortholog); malignant mesothelioma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 6 58390670 58416653 - 22301074;30032202 116903532 MODEL JAAIVD010000024;XM_032906142;XM_032906143 XP_032762033;XP_032762034 COPI coat complex subunit gamma 1;coatomer subunit gamma-1 protein-coding 625865182 LOC116914120 small nucleolar RNA SNORA17 12 20194494 20194624 + 116914120 MODEL JAAIVD010000007;XR_004389684 snorna 625865185 F10 coagulation factor X ENCODES a protein that exhibits phospholipid binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of TOR signaling (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); breast cancer (ortholog); factor X deficiency (ortholog) 13 70631495 70650566 - 22301074;30032202 116914519 MODEL JAAIVD010000008;XM_032918850 XP_032774741 protein-coding 625865197 LOC116900241 olfactory receptor 998-like 5 62926750 62927694 + 22301074;30032202 116900241 MODEL JAAIVD010000023;XM_032901992 XP_032757883 protein-coding 625865200 Gdpd1 glycerophosphodiester phosphodiesterase domain containing 1 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phospholipid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 9 83722334 83764639 + 22301074;30032202 116909021 MODEL JAAIVD010000002;XM_032912497 XP_032768388 lysophospholipase D GDPD1 protein-coding 625865214 Gclc glutamate-cysteine ligase catalytic subunit ENCODES a protein that exhibits ADP binding (ortholog); glutamate binding (ortholog); glutamate-cysteine ligase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); cell redox homeostasis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cataract (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); glutamate-cysteine ligase complex (ortholog) 8 72004657 72040891 + 22301074;30032202 116906644 MODEL JAAIVD010000027;XM_032909420 XP_032765311 glutamate--cysteine ligase catalytic subunit protein-coding 625865234 Pus3 pseudouridine synthase 3 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); tRNA pseudouridine(38/39) synthase activity (ortholog); INVOLVED IN tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly and Gray Sclerae (ortholog) 8 31097411 31105620 + 22301074;30032202 116906789 MODEL JAAIVD010000027;XM_032909650 XP_032765541 tRNA pseudouridine(38/39) synthase protein-coding 625865242 LOC116907102 olfactory receptor 8B3-like 8 32369333 32370477 - 22301074;30032202 116907102 MODEL JAAIVD010000027;XM_032910069 XP_032765960 protein-coding 625865247 LOC116884479 ribosome production factor 1-like 15 161411 162649 - 30032202 116884479 MODEL JAAIVD010000010;XM_032885595 XP_032741486 protein-coding 625865252 Atp5me ATP synthase membrane subunit e ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH heart disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 11 18211152 18212364 - 22301074;30032202 116912560 MODEL JAAIVD010000006;XM_032916662 XP_032772553 ATP synthase subunit e, mitochondrial protein-coding 625865260 LOC116910482 uncharacterized LOC116910482 9 92145212 92146129 + 116910482 MODEL JAAIVD010000002;XR_004389153 ncrna 625865264 Abcc2 ATP binding cassette subfamily C member 2 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN antibiotic metabolic process (ortholog); benzylpenicillin metabolic process (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alopecia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) 2 43309922 43366112 + 22301074;30032202 116891199 MODEL JAAIVD010000001;XM_032892024 XP_032747915 canalicular multispecific organic anion transporter 1 protein-coding 625865300 LOC116889824 small nucleolar RNA SNORD116 116889824 MODEL JAAIVD010001336;XR_004386513 snorna 625865301 Ly86 lymphocyte antigen 86 INVOLVED IN positive regulation of lipopolysaccharide-mediated signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); calcinosis (ortholog); Experimental Liver Cirrhosis (ortholog) 14 56388178 56455071 + 30032202 116883600 MODEL JAAIVD010000009;XM_032884782 XP_032740673 protein-coding 625865310 LOC116897384 U6 spliceosomal RNA 3 202569397 202569503 + 116897384 MODEL JAAIVD010000012;XR_004387428 snrna 625865313 LOC116910404 carboxypeptidase Q-like 1 207235015 207321523 + 30032202 116910404 MODEL JAAIVD010000025;XM_032914247 XP_032770138 protein-coding 625865319 Wasf3 WASP family member 3 INVOLVED IN cytoskeleton organization (ortholog); lamellipodium assembly (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN glial cell projection (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 16 7337213 7375945 - 22301074;30032202 116885406 MODEL JAAIVD010000004;XM_032886691;XM_032886692 XP_032742582;XP_032742583 wiskott-Aldrich syndrome protein family member 3 protein-coding 625865333 LOC116888484 T-complex protein 1 subunit zeta-like X 31627989 31629637 - 22301074;30032202 116888484 MODEL JAAIVD010000014;XM_032889759 XP_032745650 protein-coding 625865338 Nebl nebulette ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); filamin binding (ortholog); INVOLVED IN cardiac muscle thin filament assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); Digeorge Syndrome/Velocardiofacial Syndrome Complex 2 (ortholog); FOUND IN stress fiber (ortholog); Z disc (ortholog) 14 6519453 6633693 + 30032202 116883461 MODEL JAAIVD010000009;XM_032884610 XP_032740501 protein-coding 625865371 LOC116888539 ubiquinol-cytochrome-c reductase complex assembly factor 3-like 1 94256049 94256550 + 22301074;30032202 116888539 MODEL JAAIVD010000025;XM_032889848 XP_032745739 protein-coding 625865376 LOC116897597 small nucleolar RNA SNORA17 3 140728539 140728674 - 116897597 MODEL JAAIVD010000012;XR_004387597 snorna 625865379 Tcp1 t-complex 1 ENCODES a protein that exhibits protein folding chaperone (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH POLYMICROGYRIA AND SEIZURES (ortholog); Prostatic Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); centrosome (ortholog) 2 191644267 191651978 + 22301074;30032202 116892832 MODEL JAAIVD010000001;XM_032894720 XP_032750611 T-complex protein 1 subunit alpha protein-coding 625865395 LOC116900831 60S ribosomal protein L12-like 5 46645157 46645946 + 116900831 MODEL JAAIVD010000023 pseudo 625865396 Aaas aladin WD repeat nucleoporin INVOLVED IN fertilization (ortholog); glutathione metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); achalasia (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); mitotic spindle (ortholog) 1 260731116 260743383 + 22301074;30032202 116883484 MODEL JAAIVD010000025;XM_032884644;XM_032884651 XP_032740535;XP_032740542 aladin protein-coding 625865418 LOC116906088 mitochondrial-processing peptidase subunit beta-like 7 69918372 69923724 + 116906088 MODEL JAAIVD010000026 pseudo 625865419 LOC116888118 elongin-B-like X 102830738 102884183 + 116888118 MODEL JAAIVD010000014 pseudo 625865420 Slc37a1 solute carrier family 37 member 1 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 18 2529003 2584135 - 22301074;30032202 116886950 MODEL JAAIVD010000013;XM_032888449 XP_032744340 glucose-6-phosphate exchanger SLC37A1 protein-coding 625865444 Fn1 fibronectin 1 ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); mercury ion binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); calcium-independent cell-matrix adhesion (ortholog); cell adhesion (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Otitis Media (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basement membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 4 145148471 145216240 - 22301074;30032202 116899477 MODEL JAAIVD010000003;XM_032901302;XM_032901303;XM_032901304;XM_032901305;XM_032901306;XM_032901307;XM_032901308;XM_032901309;XM_032901310;XM_032901311 XP_032757193;XP_032757194;XP_032757195;XP_032757196;XP_032757197;XP_032757198;XP_032757199;XP_032757200;XP_032757201;XP_032757202 fibronectin protein-coding 625865505 LOC116883326 uncharacterized LOC116883326 14 20736762 20750984 + 116883326 MODEL JAAIVD010000009;XR_004385747 ncrna 625865510 Adk adenosine kinase ENCODES a protein that exhibits adenosine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); AMP salvage (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 90845847 91227965 + 22301074;30032202 116913673 MODEL JAAIVD010000007;XM_032917960;XM_032917961 XP_032773851;XP_032773852 protein-coding 625865528 LOC116914882 uncharacterized LOC116914882 13 72379566 72381319 - 116914882 MODEL JAAIVD010000008;XR_004389784 ncrna 625865533 Tagap T cell activation RhoGTPase activating protein INVOLVED IN defense response to virus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); psoriasis (ortholog) 2 192208095 192215784 + 22301074;30032202 116892844 MODEL JAAIVD010000001;XM_032894733 XP_032750624 T-cell activation Rho GTPase-activating protein protein-coding 625865545 LOC116883720 uncharacterized LOC116883720 14 33725701 33903248 + 116883720 MODEL JAAIVD010000009;XR_004385778 ncrna 625865550 LOC116913651 olfactory receptor 1537-like 12 252785 253727 - 22301074;30032202 116913651 MODEL JAAIVD010000007;XM_032917920 XP_032773811 protein-coding 625865553 LOC116913447 actin-related protein 2/3 complex subunit 1B-like 12 67078829 67080018 - 116913447 MODEL JAAIVD010000007 pseudo 625865554 LOC116894156 olfactory receptor 2D3-like 2 104927005 104927943 - 22301074 116894156 MODEL JAAIVD010000001;XM_032895873 XP_032751764 protein-coding 625865558 Fbln7 fibulin 7 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 5 107656389 107691458 + 22301074 116901950 MODEL JAAIVD010000023;XM_032904184 XP_032760075 fibulin-7 protein-coding 625865570 LOC116898661 uncharacterized LOC116898661 4 3383012 3388463 - 116898661 MODEL JAAIVD010000003;XR_004387652 ncrna 625865575 LOC116888618 olfactory receptor 13D1 1 96753755 96754693 + 22301074 116888618 MODEL JAAIVD010000025;XM_032889919 XP_032745810 protein-coding 625865578 Cebpd CCAAT enhancer binding protein delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 4 1448811 1450521 - 30032202 116898610 MODEL JAAIVD010000003;XM_032899808 XP_032755699 CCAAT/enhancer-binding protein delta protein-coding 625865583 Abcc10 ATP binding cassette subfamily C member 10 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN leukotriene metabolic process (ortholog); leukotriene transport (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; neviparine pharmacokinetics pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Recurrence (ortholog); Thyroid Neoplasms (ortholog); Zellweger syndrome (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 4 83543136 83563337 + 22301074;30032202 116899113 MODEL JAAIVD010000003;XM_032900633 XP_032756524 multidrug resistance-associated protein 7 protein-coding 625865608 Rps6kb2 ribosomal protein S6 kinase B2 ENCODES a protein that exhibits ATP binding (ortholog); peptide binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of translational initiation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog) 2 3478744 3485674 + 22301074 116890782 MODEL JAAIVD010000001;XM_032891252 XP_032747143 ribosomal protein S6 kinase beta-2 protein-coding 625865627 Slc38a8 solute carrier family 38 member 8 INVOLVED IN aspartate metabolic process (ortholog); neuron projection development (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Foveal Hypoplasia (ortholog); foveal hypoplasia 2 (ortholog); genetic disease (ortholog) 17 39127569 39147603 - 30032202 116886422 MODEL JAAIVD010000011;XM_032887907 XP_032743798 putative sodium-coupled neutral amino acid transporter 8 protein-coding 625865640 Decr2 2,4-dienoyl-CoA reductase 2 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN unsaturated fatty acid biosynthetic process (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 9 3341913 3351033 - 30032202 116909862 MODEL JAAIVD010000002;XM_032913588;XM_032913589 XP_032769479;XP_032769480 peroxisomal 2,4-dienoyl-CoA reductase protein-coding 625865657 LOC116906638 60S ribosomal protein L35-like 8 5429433 5429790 - 116906638 MODEL JAAIVD010000027 pseudo 625865658 Rps6ka2 ribosomal protein S6 kinase A2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to carbohydrate stimulus (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) 2 186684234 186828845 - 22301074;30032202 116892806 MODEL JAAIVD010000001;XM_032894681 XP_032750572 ribosomal protein S6 kinase alpha-2 protein-coding 625865683 Map7d2 MAP7 domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axon development (ortholog); microtubule cytoskeleton organization (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); microtubule (ortholog) X 33768680 33824209 - 22301074;30032202 116888362 MODEL JAAIVD010000014;XM_032889631 XP_032745522 MAP7 domain-containing protein 2 protein-coding 625865701 LOC116914071 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like 12 53178706 53179023 + 22301074;30032202 116914071 MODEL JAAIVD010000007;XM_032918378 XP_032774269 protein-coding 625865704 Rabl3 RAB, member of RAS oncogene family like 3 ENCODES a protein that exhibits GTP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); natural killer cell differentiation (ortholog); protein stabilization (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog) 4 22515387 22543725 + 30032202 116898833 MODEL JAAIVD010000003;XM_032900186 XP_032756077 rab-like protein 3 protein-coding 625865716 Mcm8 minichromosome maintenance 8 homologous recombination repair factor ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); MutLbeta complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); genetic disease (ortholog); primary ovarian insufficiency 10 (ortholog); FOUND IN MCM8-MCM9 complex (ortholog); nucleus (ortholog) 5 112522930 112553358 + 22301074;30032202 116902008 MODEL JAAIVD010000023;XM_032904275 XP_032760166 DNA helicase MCM8 protein-coding 625865739 LOC116890571 small nucleolar RNA SNORA17 1 72276588 72276710 + 116890571 MODEL JAAIVD010000025 pseudo 625865740 Qrich2 glutamine rich 2 INVOLVED IN cell projection assembly (ortholog); flagellated sperm motility (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH spermatogenic failure 35 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 9 67624671 67637480 + 116910158 MODEL JAAIVD010000002;XM_032914017 XP_032769908 glutamine-rich protein 2 protein-coding 625865756 LOC116914823 60S ribosomal protein L9-like 13 52262937 52263514 + 116914823 MODEL JAAIVD010000008 pseudo 625865757 Rmi2 RecQ mediated genome instability 2 INVOLVED IN double-strand break repair via homologous recombination (ortholog); regulation of sister chromatid segregation (ortholog); resolution of DNA recombination intermediates (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); RecQ family helicase-topoisomerase III complex (ortholog) 9 11517126 11524086 - 30032202 116910179 MODEL JAAIVD010000002;XM_032914039 XP_032769930 recQ-mediated genome instability protein 2 protein-coding 625865763 Mnat1 MNAT1 component of CDK activating kinase INVOLVED IN adult heart development (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN CAK-ERCC2 complex (ortholog); chromosome (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 7 87388057 87530683 + 22301074;30032202 116905159 MODEL JAAIVD010000026;XM_032907934 XP_032763825 CDK-activating kinase assembly factor MAT1 protein-coding 625865775 LOC116904726 small nucleolar RNA SNORA17 6 100784414 100784544 - 116904726 MODEL JAAIVD010000024;XR_004388418 snorna 625865778 LOC116909041 protein SET-like 9 8851509 8853591 - 22301074;30032202 116909041 MODEL JAAIVD010000002;XM_032912522 XP_032768413 protein-coding 625865783 Polr1a RNA polymerase I subunit A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleolus (ortholog); rRNA transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH acrofacial dysostosis Cincinnati type (ortholog); genetic disease (ortholog); Hypomyelinating Leukodystrophy 27 (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) 6 74934138 74997846 + 22301074;30032202 116903691 MODEL JAAIVD010000024;XM_032906363 XP_032762254 DNA-directed RNA polymerase I subunit RPA1 protein-coding 625865821 LOC116906806 ribosome biogenesis protein NSA2 homolog 8 22808363 22809115 + 30032202 116906806 MODEL JAAIVD010000027;XM_032909681 XP_032765572 protein-coding 625865825 Lrfn2 leucine rich repeat and fibronectin type III domain containing 2 INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); postsynapse (ortholog); postsynaptic density membrane (ortholog) 4 80831606 80997634 - 22301074;30032202 116899064 MODEL JAAIVD010000003;XM_032900535 XP_032756426 leucine-rich repeat and fibronectin type-III domain-containing protein 2 protein-coding 625865832 Adcy9 adenylate cyclase 9 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Rubinstein-Taybi syndrome (ortholog); FOUND IN axon (ortholog); ciliary basal body (ortholog); cilium (ortholog) 9 17461910 17587561 + 22301074;30032202 116910448 MODEL JAAIVD010000002;XM_032914298;XM_032914300 XP_032770189;XP_032770191 adenylate cyclase type 9 protein-coding 625865851 LOC116903300 vomeronasal type-2 receptor 26-like 6 23759073 23798495 + 22301074;30032202 116903300 MODEL JAAIVD010000024;XM_032905723 XP_032761614 protein-coding 625865859 Ruvbl2 RuvB like AAA ATPase 2 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 2 154074751 154087804 + 22301074;30032202 116892153 MODEL JAAIVD010000001;XM_032893647 XP_032749538 ruvB-like 2 protein-coding 625865877 LOC116886989 ubiquitin-conjugating enzyme E2 N-like 18 49326380 49326929 - 116886989 MODEL JAAIVD010000013 pseudo 625865878 LOC116914640 oogenesin-3-like 13 55118056 55118613 + 30032202 116914640 MODEL JAAIVD010000008;XM_032919034 XP_032774925 protein-coding 625865881 Mrpl11 mitochondrial ribosomal protein L11 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 2691224 2694085 - 22301074;30032202 116890750 MODEL JAAIVD010000001;XM_032891206;XR_004386783 XP_032747097 39S ribosomal protein L11, mitochondrial protein-coding 625865892 LOC116915199 small nucleolar RNA SNORA48 13 31365158 31365301 + 116915199 MODEL JAAIVD010000008;XR_004389853 snorna 625865895 LOC116888448 olfactory receptor 1052-like X 112848371 112849294 + 22301074;30032202 116888448 MODEL JAAIVD010000014;XM_032889725 XP_032745616 protein-coding 625865898 LOC116902879 anionic trypsin-2-like 6 99143762 99147426 - 22301074;30032202 116902879 MODEL JAAIVD010000024;XM_032905209 XP_032761100 protein-coding 625865905 LOC116890414 U7 small nuclear RNA 1 57568760 57568821 - 116890414 MODEL JAAIVD010000025;XR_004386615 snrna 625865908 LOC116886746 5S ribosomal RNA 17 43153678 43153796 - 116886746 MODEL JAAIVD010000011;XR_004386150 rrna 625865911 LOC116913871 40S ribosomal protein S11-like 12 11479401 11481700 - 116913871 MODEL JAAIVD010000007 pseudo 625865912 LOC116911964 acetyl-CoA acetyltransferase, cytosolic-like 11 26040694 26042502 - 116911964 MODEL JAAIVD010000006 pseudo 625865913 Ints6 integrator complex subunit 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); chromatin (ortholog); INTAC complex (ortholog) 12 61609928 61724024 + 30032202 116913744 MODEL JAAIVD010000007;XM_032918051;XM_032918052;XM_032918053 XP_032773942;XP_032773943;XP_032773944 protein-coding 625865943 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889659 MODEL JAAIVD010000045 trna 625865944 LOC116898053 24-hydroxycholesterol 7-alpha-hydroxylase ENCODES a protein that exhibits steroid 7-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog) 4 86099363 86175312 - 22301074;30032202 116898053 MODEL JAAIVD010000003;XM_032899445;XM_032899447 XP_032755336;XP_032755338 protein-coding 625865965 Tmem63b transmembrane protein 63B ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN drinking behavior (ortholog); intestinal stem cell homeostasis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); alveolar lamellar body membrane (ortholog); early endosome membrane (ortholog) 4 84202464 84230053 + 30032202 116899127 MODEL JAAIVD010000003;XM_032900656;XM_032900657;XM_032900659;XM_032900660 XP_032756547;XP_032756548;XP_032756550;XP_032756551 CSC1-like protein 2 protein-coding 625866000 Cct8 chaperonin containing TCP1 subunit 8 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) 4 56367464 56378934 + 22301074;30032202 116899029 MODEL JAAIVD010000003;XM_032900482 XP_032756373 T-complex protein 1 subunit theta protein-coding 625866019 Fam110d family with sequence similarity 110 member D 1 23991450 23992953 + 116894803 MODEL JAAIVD010000025;XM_032896468 XP_032752359 protein FAM110D protein-coding 625866024 LOC116889071 protein transport protein Sec61 subunit gamma-like 1 117763001 117763362 + 22301074;30032202 116889071 MODEL JAAIVD010000025;XM_032890255 XP_032746146 protein-coding 625866029 LOC116888354 ATP-dependent RNA helicase DDX3X X 38836613 38849890 - 22301074;30032202 116888354 MODEL JAAIVD010000014;XM_032889622;XM_032889623 XP_032745513;XP_032745514 protein-coding 625866052 LOC116912019 ubiquitin-conjugating enzyme E2 variant 1-like 11 69940449 69940940 + 116912019 MODEL JAAIVD010000006;XM_032915908 XP_032771799 protein-coding 625866055 LOC116910926 sphingolipid delta(4)-desaturase DES1-like 10 59404498 59409348 + 116910926 MODEL JAAIVD010000005 pseudo 625866056 Stard13 StAR related lipid transfer domain containing 13 INVOLVED IN endothelial cell migration (ortholog); endothelial tube lumen extension (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 16 579196 789917 - 22301074;30032202 116885308 MODEL JAAIVD010000004;XM_032886562;XM_032886563;XM_032886564;XM_032886565;XM_032886566 XP_032742453;XP_032742454;XP_032742455;XP_032742456;XP_032742457 stAR-related lipid transfer protein 13 protein-coding 625866082 LOC116893436 vomeronasal type-1 receptor 4-like 2 176036424 176037243 + 116893436 MODEL JAAIVD010000001 pseudo 625866083 LOC116884003 spermatogenesis-associated protein 31D3-like 14 78420143 78426024 + 116884003 MODEL JAAIVD010000009;XM_032885239 XP_032741130 protein-coding 625866089 Txlna taxilin alpha INVOLVED IN B cell activation (ortholog); FOUND IN cytoplasm (ortholog) 1 28509001 28523424 + 22301074;30032202 116896058 MODEL JAAIVD010000025;XM_032897053 XP_032752944 alpha-taxilin protein-coding 625866104 LOC116886545 40S ribosomal protein S14-like 17 36035468 36035929 - 116886545 MODEL JAAIVD010000011 pseudo 625866105 Icam1 intercellular adhesion molecule 1 ENCODES a protein that exhibits integrin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN eicosanoid signaling pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) 8 17279224 17290965 + 22301074;30032202 116907803 MODEL JAAIVD010000027;XM_032910948 XP_032766839 protein-coding 625866116 LOC116883250 uncharacterized LOC116883250 14 68903671 68932196 - 116883250 MODEL JAAIVD010000009 pseudo 625866117 Dnm2 dynamin 2 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GTPase activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN actin filament bundle organization (ortholog); aorta development (ortholog); autophagy (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; syndecan signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); centriole (ortholog) 8 17696581 17779603 + 22301074;30032202 116907680 MODEL JAAIVD010000027;XM_032910776;XM_032910777;XM_032910778;XM_032910779;XM_032910780;XM_032910781;XM_032910782;XM_032910784;XM_032910785;XM_032910786 XP_032766667;XP_032766668;XP_032766669;XP_032766670;XP_032766671;XP_032766672;XP_032766673;XP_032766675;XP_032766676;XP_032766677 dynamin-2 protein-coding 625866161 LOC116912049 F-box only protein 48-like 11 85462129 85463032 + 116912049 MODEL JAAIVD010000006 pseudo 625866162 Tmem120b transmembrane protein 120B ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); protein heterooligomerization (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN nuclear inner membrane (ortholog) 16 30704638 30746630 - 30032202 116885317 MODEL JAAIVD010000004;XM_032886578 XP_032742469 protein-coding 625866178 Mcrs1 microspherule protein 1 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); poly(G) binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytoplasm (ortholog); dendrite (ortholog); histone acetyltransferase complex (ortholog) 1 272048890 272057740 - 22301074;30032202 116885132 MODEL JAAIVD010000025;XM_032886299 XP_032742190 protein-coding 625866197 LOC116896906 la-related protein 1B-like 3 112955740 112988910 - 30032202 116896906 MODEL JAAIVD010000012;XM_032898459;XM_032898461;XM_032898462;XM_032898463 XP_032754350;XP_032754352;XP_032754353;XP_032754354 protein-coding 625866218 LOC116894533 vomeronasal type-2 receptor 116-like 2 176054763 176079283 - 22301074;30032202 116894533 MODEL JAAIVD010000001;XM_032896235;XM_032896236;XM_032896237 XP_032752126;XP_032752127;XP_032752128 protein-coding 625866231 LOC116906968 uncharacterized LOC116906968 8 11345686 11347766 + 116906968 MODEL JAAIVD010000027;XR_004388789 ncrna 625866236 LOC116883201 sperm motility kinase X-like 14 40792872 40794682 - 22301074;30032202 116883201 MODEL JAAIVD010000009;XM_032884230 XP_032740121 protein-coding 625866240 LOC116906480 small nucleolar RNA SNORA17 7 87409844 87409893 - 116906480 MODEL JAAIVD010000026 pseudo 625866241 Radil Rap associating with DIL domain INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); FOUND IN microtubule (ortholog); protein-containing complex (ortholog) 16 10598984 10660048 + 22301074;30032202 116885569 MODEL JAAIVD010000004;XM_032886861 XP_032742752 ras-associating and dilute domain-containing protein protein-coding 625866259 Tmprss4 transmembrane serine protease 4 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN negative regulation of growth rate (ortholog); protein processing (ortholog); proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); FOUND IN extracellular space (ortholog); secretory granule (ortholog) 8 39702948 39735574 - 22301074 116907011 MODEL JAAIVD010000027;XM_032909944;XM_032909945;XM_032909946;XM_032909947 XP_032765835;XP_032765836;XP_032765837;XP_032765838 transmembrane protease serine 4 protein-coding 625866287 LOC116895682 40S ribosomal protein S27-like 3 200952413 200952737 + 116895682 MODEL JAAIVD010000012 pseudo 625866288 Ccdc25 coiled-coil domain containing 25 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of cell motility (ortholog); FOUND IN endomembrane system (ortholog); plasma membrane (ortholog) 12 58575339 58609293 - 116913415 MODEL JAAIVD010000007;XM_032917600 XP_032773491 coiled-coil domain-containing protein 25 protein-coding 625866301 Stc1 stanniocalcin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to cAMP (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 12 55096179 55108212 - 22301074;30032202 116913676 MODEL JAAIVD010000007;XM_032917964 XP_032773855 stanniocalcin-1 protein-coding 625866309 Ak5 adenylate kinase 5 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog) 3 8968091 9161994 + 22301074;30032202 116896149 MODEL JAAIVD010000012;XM_032897134;XM_032897135 XP_032753025;XP_032753026 adenylate kinase isoenzyme 5 protein-coding 625866332 Fmo5 flavin containing dimethylaniline monoxygenase 5 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN regulation of cholesterol metabolic process (ortholog); xenobiotic metabolic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 3 59657196 59684053 - 22301074;30032202 116896487 MODEL JAAIVD010000012;XM_032897657 XP_032753548 dimethylaniline monooxygenase [N-oxide-forming] 5 protein-coding 625866344 LOC116896695 ATP synthase subunit g, mitochondrial-like 3 65229052 65229672 - 116896695 MODEL JAAIVD010000012 pseudo 625866345 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 155085736 155085809 + 116897676 MODEL JAAIVD010000012 trna 625866346 LOC116904453 non-histone chromosomal protein HMG-14-like 6 128528545 128537919 + 116904453 MODEL JAAIVD010000024 pseudo 625866347 LOC116887509 olfactory receptor 12D2-like 18 10250356 10251282 - 22301074 116887509 MODEL JAAIVD010000013;XM_032889135 XP_032745026 protein-coding 625866350 LOC116904224 60S ribosomal protein L30-like 6 154448580 154448961 - 116904224 MODEL JAAIVD010000024 pseudo 625866351 LOC116911618 mothers against decapentaplegic homolog 2-like 10 28838872 28841106 + 116911618 MODEL JAAIVD010000005 pseudo 625866352 Serbp1 SERPINE1 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); PML body organization (ortholog); regulation of apoptotic process (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 6 76814694 76834807 + 30032202 116903710 MODEL JAAIVD010000024;XM_032906383;XM_032906384;XM_032906385;XM_032906386 XP_032762274;XP_032762275;XP_032762276;XP_032762277 plasminogen activator inhibitor 1 RNA-binding protein protein-coding 625866369 Vstm4 V-set and transmembrane domain containing 4 INVOLVED IN endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); retina blood vessel maintenance (ortholog) 13 8581485 8663646 + 116914497 MODEL JAAIVD010000008;XM_032918811 XP_032774702 V-set and transmembrane domain-containing protein 4 protein-coding 625866380 Bloc1s3 biogenesis of lysosomal organelles complex 1 subunit 3 ENCODES a protein that exhibits protein transmembrane transporter activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); blood coagulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 8 (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 171116453 171118192 + 30032202 116892528 MODEL JAAIVD010000001;XM_032894286;XM_032894287 XP_032750177;XP_032750178 biogenesis of lysosome-related organelles complex 1 subunit 3 protein-coding 625866389 Lypd3 LY6/PLAUR domain containing 3 ENCODES a protein that exhibits laminin binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); FOUND IN membrane (ortholog) 2 170075343 170079941 - 30032202 116894488 MODEL JAAIVD010000001;XM_032896198 XP_032752089 ly6/PLAUR domain-containing protein 3 protein-coding 625866398 LOC116898543 cilia- and flagella-associated protein 65-like 4 148351878 148353831 - 116898543 MODEL JAAIVD010000003;XM_032899758 XP_032755649 protein-coding 625866403 LOC116886602 40S ribosomal protein S11-like 17 10530251 10530723 - 116886602 MODEL JAAIVD010000011 pseudo 625866404 Ttc12 tetratricopeptide repeat domain 12 INVOLVED IN axonemal dynein complex assembly (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alcohol dependence (ortholog); Asthenozoospermia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 43923675 43970945 - 22301074 116907875 MODEL JAAIVD010000027;XM_032911062 XP_032766953 tetratricopeptide repeat protein 12 protein-coding 625866430 LOC116907579 40S ribosomal protein S15a-like 8 99661901 99662669 + 116907579 MODEL JAAIVD010000027 pseudo 625866431 Tuba8 tubulin alpha 8 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant isolated macrothrombocytopenia 2 (ortholog); Duane retraction syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) 6 25513840 25530501 - 22301074;30032202 116903320 MODEL JAAIVD010000024;XM_032905755 XP_032761646 tubulin alpha-8 chain protein-coding 625866441 LOC116887238 olfactory receptor 2H2-like 18 10089171 10092850 - 22301074 116887238 MODEL JAAIVD010000013;XM_032888800;XM_032888802 XP_032744691;XP_032744693 protein-coding 625866447 Slc25a33 solute carrier family 25 member 33 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); mitochondria-nucleus signaling pathway (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 10996299 11021663 + 30032202 116892559 MODEL JAAIVD010000025;XM_032894341 XP_032750232 protein-coding 625866458 Gorab golgin, RAB6 interacting INVOLVED IN dorsal/ventral neural tube patterning (ortholog); hair follicle morphogenesis (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); geroderma osteodysplasticum (ortholog); osteoporosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 10 42647556 42664278 - 30032202 116911174 MODEL JAAIVD010000005;XM_032915034;XM_032915035;XM_032915036 XP_032770925;XP_032770926;XP_032770927 RAB6-interacting golgin protein-coding 625866473 LOC116883513 histone H1.5 14 41903800 41904851 + 22301074 116883513 MODEL JAAIVD010000009;XM_032884684 XP_032740575 protein-coding 625866478 Lrrc8b leucine rich repeat containing 8 VRAC subunit B ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN monoatomic anion transmembrane transport (ortholog); FOUND IN cytoplasm (ortholog); monoatomic ion channel complex (ortholog); plasma membrane (ortholog) 11 15149601 15214447 + 22301074 116912778 MODEL JAAIVD010000006;XM_032916936;XM_032916937;XM_032916938;XM_032916940;XM_032916941 XP_032772827;XP_032772828;XP_032772829;XP_032772831;XP_032772832 volume-regulated anion channel subunit LRRC8B protein-coding 625866503 LOC116890138 lymphocyte antigen 6B-like 1 247728839 247731922 + 30032202 116890138 MODEL JAAIVD010000025;XM_032890875 XP_032746766 protein-coding 625866508 LOC116914773 sperm-associated antigen 11-like 13 64988488 64990617 - 22301074;30032202 116914773 MODEL JAAIVD010000008;XM_032919218;XM_032919219 XP_032775109;XP_032775110 protein-coding 625866516 Tmem183a transmembrane protein 183A ASSOCIATED WITH prostate cancer (ortholog) 10 1328305 1345095 + 22301074;30032202 116911084 MODEL JAAIVD010000005;XM_032914870;XM_032914871;XM_032914872 XP_032770761;XP_032770762;XP_032770763 protein-coding 625866533 LOC116900266 olfactory receptor 5M11-like 5 63268453 63269427 + 22301074;30032202 116900266 MODEL JAAIVD010000023;XM_032902018 XP_032757909 protein-coding 625866536 Tshb thyroid stimulating hormone subunit beta INVOLVED IN response to calcium ion (ortholog); response to estrogen (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Coma (ortholog); congenital hypothyroidism (ortholog); FOUND IN cytoplasm (ortholog) 3 55313780 55314719 + 22301074;30032202 116895379 MODEL JAAIVD010000012;XM_032896671 XP_032752562 thyrotropin subunit beta protein-coding 625866542 LOC116911590 heterogeneous nuclear ribonucleoproteins C1/C2-like 10 20350667 20351552 + 116911590 MODEL JAAIVD010000005 pseudo 625866543 Eid2b EP300 interacting inhibitor of differentiation 2B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of myoblast differentiation (ortholog); FOUND IN nucleus (ortholog) 2 167736720 167738534 - 30032202 116892400 MODEL JAAIVD010000001;XM_032894075 XP_032749966 EP300-interacting inhibitor of differentiation 2B protein-coding 625866548 Cacna2d3 calcium voltage-gated channel auxiliary subunit alpha2delta 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); regulation of presynapse organization (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog) 13 4635233 5439935 - 30032202 116914975 MODEL JAAIVD010000008;XM_032919383 XP_032775274 voltage-dependent calcium channel subunit alpha-2/delta-3 protein-coding 625866590 LOC116886734 5S ribosomal RNA 17 43151982 43152100 - 116886734 MODEL JAAIVD010000011;XR_004386143 rrna 625866593 LOC116897467 U7 small nuclear RNA 3 121039835 121039899 + 116897467 MODEL JAAIVD010000012;XR_004387495 snrna 625866596 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42399374 42399446 - 116884175 MODEL JAAIVD010000009 trna 625866597 Ypel1 yippee like 1 ASSOCIATED WITH COVID-19 (ortholog) 4 2345322 2358238 + 116898624 MODEL JAAIVD010000003;XM_032899838;XM_032899839 XP_032755729;XP_032755730 protein yippee-like 1 protein-coding 625866609 Dnmbp dynamin binding protein ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cilium assembly (ortholog); regulation of cell shape (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH cataract 48 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 2 43378870 43472696 - 22301074 116891200 MODEL JAAIVD010000001;XM_032892025;XM_032892026 XP_032747916;XP_032747917 dynamin-binding protein protein-coding 625866633 Pou2f2 POU class 2 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); mature B cell differentiation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 169531289 169616279 + 22301074;30032202 116892470 MODEL JAAIVD010000001;XM_032894188;XM_032894189;XM_032894190;XM_032894191;XM_032894192;XM_032894194 XP_032750079;XP_032750080;XP_032750081;XP_032750082;XP_032750083;XP_032750085 POU domain, class 2, transcription factor 2 protein-coding 625866665 Serinc4 serine incorporator 4 5 99607636 99613445 - 22301074;30032202 116901867 MODEL JAAIVD010000023;XM_032904067;XM_032904068 XP_032759958;XP_032759959 protein-coding 625866684 Slc7a6 solute carrier family 7 member 6 ENCODES a protein that exhibits arginine binding (ortholog); basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); INVOLVED IN glycine betaine transport (ortholog); L-arginine transmembrane transport (ortholog); L-leucine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway 17 25911548 25935896 + 22301074;30032202 116886198 MODEL JAAIVD010000011;XM_032887579;XM_032887580;XM_032887582;XM_032887583;XM_032887584;XR_004386094 XP_032743470;XP_032743471;XP_032743473;XP_032743474;XP_032743475 Y+L amino acid transporter 2 protein-coding 625866713 LOC116897834 fibroblast growth factor 12-like 4 12153282 12168118 - 22301074;30032202 116897834 MODEL JAAIVD010000003;XM_032899250 XP_032755141 protein-coding 625866718 C10H1orf21 chromosome 10 C1orf21 homolog ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 10 31343430 31439697 - 116911071 MODEL JAAIVD010000005;XM_032914843 XP_032770734 uncharacterized protein C1orf21 homolog protein-coding 625866725 Cir1 corepressor interacting with RBPJ, CIR1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 5 50632496 50663205 - 30032202 116901519 MODEL JAAIVD010000023;XM_032903496 XP_032759387 corepressor interacting with RBPJ 1 protein-coding 625866739 LOC116890578 small nucleolar RNA SNORA17 1 183435265 183435397 - 116890578 MODEL JAAIVD010000025;XR_004386741 snorna 625866742 Nudt21 nudix hydrolase 21 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 17 928387 948151 - 22301074;30032202 116886570 MODEL JAAIVD010000011;XM_032888091 XP_032743982 cleavage and polyadenylation specificity factor subunit 5 protein-coding 625866753 LOC116902646 U2 spliceosomal RNA 5 22029176 22029304 + 116902646 MODEL JAAIVD010000023 pseudo 625866754 Arhgdig Rho GDP dissociation inhibitor gamma ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); regulation of protein localization (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 9 3459398 3461549 - 22301074;30032202 116910558 MODEL JAAIVD010000002;XM_032914470;XM_032914471 XP_032770361;XP_032770362 rho GDP-dissociation inhibitor 3 protein-coding 625866768 Dkk4 dickkopf WNT signaling pathway inhibitor 4 INVOLVED IN negative regulation of hair follicle placode formation (ortholog); Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway 13 63803549 63806420 - 22301074;30032202 116914471 MODEL JAAIVD010000008;XM_032918770 XP_032774661 dickkopf-related protein 4 protein-coding 625866775 Acadsb acyl-CoA dehydrogenase short/branched chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); electron transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid metabolic process (ortholog); L-isoleucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 2-Methylbutyryl-CoA Dehydrogenase Deficiency (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 2 70397435 70437555 - 22301074;30032202 116891403 MODEL JAAIVD010000001;XM_032892429 XP_032748320 short/branched chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 625866790 Cnot7 CCR4-NOT transcription complex subunit 7 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-binding transcription factor binding (ortholog); piRNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); defense response to virus (ortholog); miRNA-mediated gene silencing by mRNA destabilization (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 13 46959308 46978336 + 22301074;30032202 116914382 MODEL JAAIVD010000008;XM_032918589;XM_032918590;XM_032918591;XM_032918592;XM_032918593;XM_032918594 XP_032774480;XP_032774481;XP_032774482;XP_032774483;XP_032774484;XP_032774485 protein-coding 625866814 Tln1 talin 1 ENCODES a protein that exhibits integrin binding (ortholog); LIM domain binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN cell-substrate junction assembly (ortholog); cortical actin cytoskeleton organization (ortholog); cortical microtubule organization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH capillary leak syndrome (ortholog); Neoplasm Invasiveness (ortholog); osteoporosis (ortholog); FOUND IN adherens junction (ortholog); focal adhesion (ortholog) 1 2934685 2964721 + 22301074;30032202 116890972 MODEL JAAIVD010000025;XM_032891640;XM_032891647 XP_032747531;XP_032747538 talin-1 protein-coding 625866878 Fgfr1op2 FGFR1 oncogene partner 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN wound healing (ortholog); ASSOCIATED WITH myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog) 6 4253240 4274375 + 30032202 116903089 MODEL JAAIVD010000024;XM_032905409;XM_032905410 XP_032761300;XP_032761301 protein-coding 625866890 Mtfr2 mitochondrial fission regulator 2 INVOLVED IN aerobic respiration (ortholog); mitochondrial fission (ortholog); mitochondrion organization (ortholog); FOUND IN mitochondrion (ortholog) 2 216222329 216237413 - 30032202 116892973 MODEL JAAIVD010000001;XM_032894931 XP_032750822 protein-coding 625866902 Upk3b uroplakin 3B INVOLVED IN negative regulation of D-glucose import (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 16 17969421 17975887 - 116885608 MODEL JAAIVD010000004;XM_032886909 XP_032742800 uroplakin-3b protein-coding 625866912 Pou2f1 POU class 2 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN lens induction in camera-type eye (ortholog); liver regeneration (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN forkhead class A signaling pathway; RNA polymerase III transcription pathway; FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 44968725 45107130 - 22301074;30032202 116911380 MODEL JAAIVD010000005;XM_032915322;XM_032915323;XM_032915324;XM_032915325;XM_032915326;XM_032915327;XM_032915328;XM_032915329;XM_032915330;XR_004389324 XP_032771213;XP_032771214;XP_032771215;XP_032771216;XP_032771217;XP_032771218;XP_032771219;XP_032771220;XP_032771221 POU domain, class 2, transcription factor 1 protein-coding 625866960 LOC116906423 small nucleolar RNA SNORA19 7 82996686 82996817 - 116906423 MODEL JAAIVD010000026;XR_004388685 snorna 625866963 LOC116886678 disks large homolog 5-like 17 14769295 14773995 + 116886678 MODEL JAAIVD010000011;XM_032888169 XP_032744060 protein-coding 625866973 Stbd1 starch binding domain 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); enzyme binding (ortholog); glycogen binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycophagy (ortholog); lysosomal transport (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 11 5428813 5432229 + 22301074;30032202 116912563 MODEL JAAIVD010000006;XM_032916666 XP_032772557 starch-binding domain-containing protein 1 protein-coding 625866979 Sntg2 syntrophin gamma 2 ENCODES a protein that exhibits neuroligin family protein binding (ortholog); PDZ domain binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); High Myopia (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 7 43591052 43793776 - 22301074;30032202 116904939 MODEL JAAIVD010000026;XM_032907580;XM_032907581 XP_032763471;XP_032763472 gamma-2-syntrophin protein-coding 625867004 LOC116911978 sperm motility kinase-like 11 41795882 41809011 + 116911978 MODEL JAAIVD010000006 pseudo 625867005 Akap6 A-kinase anchoring protein 6 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to cAMP (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH anorexia nervosa (ortholog); atrial fibrillation (ortholog); congestive heart failure (ortholog); FOUND IN calcium channel complex (ortholog); caveola (ortholog); cytoplasm (ortholog) 7 66154586 66546220 + 30032202 116905044 MODEL JAAIVD010000026;XM_032907724;XM_032907725 XP_032763615;XP_032763616 A-kinase anchor protein 6 protein-coding 625867025 Arhgap31 Rho GTPase activating protein 31 ENCODES a protein that exhibits GTPase activator activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 1 (ortholog); cerebral palsy (ortholog); FOUND IN lamellipodium (ortholog) 4 23542762 23656029 - 30032202 116898849 MODEL JAAIVD010000003;XM_032900203 XP_032756094 rho GTPase-activating protein 31 protein-coding 625867041 Jpt2 Jupiter microtubule associated homolog 2 INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); regulation of calcium-mediated signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 9 2222254 2240474 - 30032202 116909383 MODEL JAAIVD010000002;XM_032912938;XM_032912939 XP_032768829;XP_032768830 protein-coding 625867053 Tmem214 transmembrane protein 214 ASSOCIATED WITH autistic disorder (ortholog); Contracture (ortholog); FOUND IN cytoplasmic microtubule (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 23207139 23216153 - 30032202 116905998 MODEL JAAIVD010000026;XM_032909036 XP_032764927 protein-coding 625867074 LOC116900467 uncharacterized LOC116900467 1 116455585 116513982 + 116900467 MODEL JAAIVD010000025 pseudo 625867075 LOC116904481 uncharacterized LOC116904481 6 142148887 142252958 + 116904481 MODEL JAAIVD010000024 pseudo 625867076 LOC116897915 UBX domain-containing protein 2A 4 39552703 39553630 - 30032202 116897915 MODEL JAAIVD010000003;XM_032899316 XP_032755207 protein-coding 625867081 LOC116898062 40S ribosomal protein S27-like 4 87712558 87712865 + 22301074;30032202 116898062 MODEL JAAIVD010000003;XM_032899458 XP_032755349 protein-coding 625867085 Fblim1 filamin binding LIM protein 1 ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); regulation of integrin activation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 1 16546267 16574574 + 30032202 116893315 MODEL JAAIVD010000025;XM_032895138;XM_032895143;XM_032895147 XP_032751029;XP_032751034;XP_032751038 filamin-binding LIM protein 1 protein-coding 625867102 LOC116903796 uncharacterized LOC116903796 6 88797085 88801650 - 116903796 MODEL JAAIVD010000024;XR_004388295 ncrna 625867107 Nedd4l NEDD4 like E3 ubiquitin protein ligase ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); sodium channel inhibitor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); negative regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cleft palate (ortholog); Developmental Disease (ortholog); FOUND IN apical plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 15 66057102 66380876 - 22301074;30032202 116884299 MODEL JAAIVD010000010;XM_032885399 XP_032741290 E3 ubiquitin-protein ligase NEDD4-like protein-coding 625867142 LOC116887775 small nucleolar RNA SNORD52 18 7546332 7546397 - 116887775 MODEL JAAIVD010000013;XR_004386272 snorna 625867145 Znf32 zinc finger protein 32 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleus (ortholog) 6 28891579 28895914 - 30032202 116903357 MODEL JAAIVD010000024;XM_032905830 XP_032761721 protein-coding 625867152 LOC116894304 inactive hydroxysteroid dehydrogenase-like protein 1 2 141377889 141378868 + 116894304 MODEL JAAIVD010000001 pseudo 625867153 Pla2g12a phospholipase A2 group XIIA ENCODES a protein that exhibits phospholipase A2 activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 3 29409425 29425128 - 22301074;30032202 116896262 MODEL JAAIVD010000012;XM_032897338 XP_032753229 group XIIA secretory phospholipase A2 protein-coding 625867161 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41454033 41454104 - 116884158 MODEL JAAIVD010000009 trna 625867162 Tut7 terminal uridylyl transferase 7 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); miRNA metabolic process (ortholog); oocyte maturation (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 78304534 78358921 + 22301074;30032202 116883815 MODEL JAAIVD010000009;XM_032885065 XP_032740956 terminal uridylyltransferase 7 protein-coding 625867195 Foxo4 forkhead box O4 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); insulin receptor signaling pathway (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH alcohol-induced mental disorder (ortholog); gastric ulcer (ortholog); hemangioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) X 59282133 59288854 - 30032202 116888817 MODEL JAAIVD010000014;XM_032890096 XP_032745987 forkhead box protein O4 protein-coding 625867202 Tbkbp1 TBK1 binding protein 1 ASSOCIATED WITH ankylosing spondylitis (ortholog) 9 57241284 57254635 + 30032202 116909344 MODEL JAAIVD010000002;XM_032912893;XM_032912894 XP_032768784;XP_032768785 TANK-binding kinase 1-binding protein 1 protein-coding 625867217 LOC116900645 cytochrome c, somatic-like 5 111646346 111646660 + 22301074;30032202 116900645 MODEL JAAIVD010000023;XM_032902355 XP_032758246 protein-coding 625867220 LOC116914684 fructose-bisphosphate aldolase A-like 13 43108601 43109741 - 116914684 MODEL JAAIVD010000008 pseudo 625867221 LOC116894196 olfactory receptor 490-like 2 106198049 106198993 - 22301074;30032202 116894196 MODEL JAAIVD010000001;XM_032895909 XP_032751800 protein-coding 625867224 LOC116907819 olfactory receptor 145-like 8 31763402 31764341 + 116907819 MODEL JAAIVD010000027 pseudo 625867225 LOC116890128 60S ribosomal protein L29-like 1 247382535 247382936 + 22301074;30032202 116890128 MODEL JAAIVD010000025;XM_032890866 XP_032746757 protein-coding 625867228 LOC116887851 dystrophin-like X 42122163 42354377 - 22301074;30032202 116887851 MODEL JAAIVD010000014;XM_032889355 XP_032745246 protein-coding 625867239 G3bp2 G3BP stress granule assembly factor 2 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN protein homooligomerization (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog) 11 4886698 4917216 - 30032202 116912425 MODEL JAAIVD010000006;XM_032916493 XP_032772384 ras GTPase-activating protein-binding protein 2 protein-coding 625867255 Igfbpl1 insulin like growth factor binding protein like 1 INVOLVED IN cellular response to tumor cell (ortholog); FOUND IN extracellular space (ortholog) 1 676058 691653 + 22301074;30032202 116885718 MODEL JAAIVD010000025;XM_032887030 XP_032742921 insulin-like growth factor-binding protein-like 1 protein-coding 625867264 LOC116889474 small nucleolar RNA SNORA36 family X 102950557 102950688 + 116889474 MODEL JAAIVD010000014;XR_004386426 snorna 625867267 LOC116902027 L-lactate dehydrogenase A chain-like 5 119072068 119073161 - 22301074 116902027 MODEL JAAIVD010000023;XM_032904303 XP_032760194 protein-coding 625867272 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48723533 48723621 - 116910839 MODEL JAAIVD010000002 trna 625867273 Sec14l2 SEC14 like lipid binding 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN positive regulation of cholesterol biosynthetic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 11 73085152 73104936 - 30032202 116912369 MODEL JAAIVD010000006;XM_032916428;XM_032916429 XP_032772319;XP_032772320 SEC14-like protein 2 protein-coding 625867292 LOC116887782 small nucleolar RNA SNORA4 18 35520821 35520967 - 116887782 MODEL JAAIVD010000013;XR_004386279 snorna 625867295 LOC116908413 small nucleolar RNA SNORA17 8 94322236 94322363 - 116908413 MODEL JAAIVD010000027;XR_004388953 snorna 625867298 Nt5c2 5'-nucleotidase, cytosolic II ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); amide catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 46358619 46538231 - 30032202 116891258 MODEL JAAIVD010000001;XM_032892141;XM_032892142;XM_032892143;XM_032892144 XP_032748032;XP_032748033;XP_032748034;XP_032748035 cytosolic purine 5'-nucleotidase protein-coding 625867331 LOC116889472 small nucleolar RNA SNORD61 X 117827515 117827585 - 116889472 MODEL JAAIVD010000014;XR_004386424 snorna 625867334 Cmklr2 chemerin chemokine-like receptor 2 ENCODES a protein that exhibits adipokinetic hormone binding (ortholog); adipokinetic hormone receptor activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 4 137170710 137171809 - 22301074;30032202 116898196 MODEL JAAIVD010000003;XM_032899559 XP_032755450 Gpr1 G protein-coupled receptor 1;G-protein coupled receptor 1 protein-coding 625867338 LOC116887744 small Cajal body-specific RNA 14 18 4822877 4822957 + 116887744 MODEL JAAIVD010000013;XR_004386250 ncrna 625867341 Bmp5 bone morphogenetic protein 5 ENCODES a protein that exhibits BMP receptor binding (ortholog); INVOLVED IN allantois development (ortholog); anterior head development (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); Meier-Gorlin syndrome (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) 8 70038275 70164632 + 22301074;30032202 116907231 MODEL JAAIVD010000027;XM_032910196;XM_032910197 XP_032766087;XP_032766088 protein-coding 625867351 LOC116904512 thymosin beta-10-like 6 6149091 6149337 - 22301074;30032202 116904512 MODEL JAAIVD010000024;XM_032907302 XP_032763193 protein-coding 625867355 Edrf1 erythroid differentiation regulatory factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog) 2 68203772 68240806 - 30032202 116891388 MODEL JAAIVD010000001;XM_032892404;XM_032892405;XM_032892406 XP_032748295;XP_032748296;XP_032748297 erythroid differentiation-related factor 1 protein-coding 625867389 Ncl nucleolin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA topoisomerase binding (ortholog); ErbB-4 class receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autistic disorder (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); chromosome (ortholog) 4 158486212 158494452 - 22301074;30032202 116899589 MODEL JAAIVD010000003;XM_032901530 XP_032757421 protein-coding 625867407 Lenep lens epithelial protein 3 64264838 64265514 + 22301074;30032202 116896644 MODEL JAAIVD010000012;XM_032897965 XP_032753856 lens epithelial cell protein LEP503 protein-coding 625867413 Tex29 testis expressed 29 13 71993929 72007987 - 116915111 MODEL JAAIVD010000008;XM_032919541 XP_032775432 testis-expressed protein 29 protein-coding 625867423 LOC116911551 voltage-dependent L-type calcium channel subunit alpha-1S-like 10 6628657 6634474 - 22301074;30032202 116911551 MODEL JAAIVD010000005;XM_032915541 XP_032771432 protein-coding 625867433 Npc2 NPC intracellular cholesterol transporter 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); enzyme binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol storage (ortholog); ASSOCIATED WITH genetic disease (ortholog); Niemann-Pick disease (ortholog); Niemann-Pick disease type A (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog) 7 98860259 98881423 - 22301074;30032202 116905278 MODEL JAAIVD010000026;XM_032908137 XP_032764028 protein-coding 625867441 Sebox SEBOX homeobox INVOLVED IN embryo development ending in birth or egg hatching (ortholog); oogenesis (ortholog) 9 91938213 91939227 - 22301074 116910418 MODEL JAAIVD010000002;XM_032914261 XP_032770152 homeobox protein SEBOX protein-coding 625867447 Rpl22 ribosomal protein L22 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); translation at presynapse (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 1 8407117 8415703 - 22301074;30032202 116892256 MODEL JAAIVD010000025;XM_032893840 XP_032749731 60S ribosomal protein L22 protein-coding 625867455 LOC116906038 probable glutathione peroxidase 8 7 40076592 40108232 - 116906038 MODEL JAAIVD010000026 pseudo 625867456 Mylk myosin light chain kinase ENCODES a protein that exhibits enzyme binding (ortholog); myosin light chain kinase activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN aorta smooth muscle tissue morphogenesis (ortholog); bleb assembly (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); allergic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cleavage furrow (ortholog) 4 19595180 19775758 + 22301074 116898803 MODEL JAAIVD010000003;XM_032900154 XP_032756045 myosin light chain kinase, smooth muscle protein-coding 625867491 Ift88 intraflagellar transport 88 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); autosomal recessive polycystic kidney disease (ortholog); basal cell carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); axonemal basal plate (ortholog); axoneme (ortholog) 12 67310745 67402944 - 30032202 116913310 MODEL JAAIVD010000007;XM_032917447;XM_032917448;XM_032917449;XM_032917450 XP_032773338;XP_032773339;XP_032773340;XP_032773341 intraflagellar transport protein 88 homolog protein-coding 625867529 LOC116892966 zinc finger protein 431-like 1 12930236 12936936 + 22301074;30032202 116892966 MODEL JAAIVD010000025;XM_032894920 XP_032750811 protein-coding 625867537 C11H5orf52 chromosome 11 C5orf52 homolog 11 72899163 72905954 - 116912072 MODEL JAAIVD010000006;XM_032915936 XP_032771827 uncharacterized protein C5orf52 homolog protein-coding 625867544 LOC116905834 importin subunit alpha-1-like 7 106772040 106773669 - 116905834 MODEL JAAIVD010000026 pseudo 625867545 KEG97_t13 tRNA-Asp MT 6930 6997 + 64988245 trna 625867546 LOC116888952 40S ribosomal protein S17-like X 44950121 44950526 - 116888952 MODEL JAAIVD010000014 pseudo 625867547 Gprc5c G protein-coupled receptor class C group 5 member C FOUND IN centriolar satellite (ortholog); cilium (ortholog); plasma membrane (ortholog) 9 74448196 74470113 - 22301074;30032202 116909752 MODEL JAAIVD010000002;XM_032913432;XM_032913433;XM_032913435;XM_032913436;XM_032913437;XM_032913438 XP_032769323;XP_032769324;XP_032769326;XP_032769327;XP_032769328;XP_032769329 G-protein coupled receptor family C group 5 member C protein-coding 625867573 LOC116914392 histone deacetylase 1-like 1 187489791 187493328 + 116914392 MODEL JAAIVD010000025 pseudo 625867574 Tuft1 tuftelin 1 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); ASSOCIATED WITH genetic disease (ortholog); palmoplantar keratoderma and woolly hair (ortholog); palmoplantar keratosis (ortholog); FOUND IN cytoplasm (ortholog) 3 62507972 62553328 + 30032202 116896582 MODEL JAAIVD010000012;XM_032897808;XM_032897809 XP_032753699;XP_032753700 tuftelin protein-coding 625867594 LOC116912435 heterogeneous nuclear ribonucleoprotein F-like 11 13368009 13369983 + 22301074;30032202 116912435 MODEL JAAIVD010000006;XM_032916503 XP_032772394 protein-coding 625867599 LOC116910079 angiotensin-converting enzyme-like protein Ace3 9 73102332 73116505 - 22301074;30032202 116910079 MODEL JAAIVD010000002;XM_032913895 XP_032769786 protein-coding 625867618 Pcsk1 proprotein convertase subtilisin/kexin type 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN insulin processing (ortholog); neurogenesis (ortholog); pancreas development (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered melanocortin system pathway; melanocortin system pathway; ASSOCIATED WITH Body Weight (ortholog); Dehydration (ortholog); Dwarfism (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); extracellular space (ortholog) 3 221645815 221689571 - 22301074;30032202 116897365 MODEL JAAIVD010000012;XM_032899124 XP_032755015 neuroendocrine convertase 1 protein-coding 625867636 Nfatc2 nuclear factor of activated T cells 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); calcineurin-NFAT signaling cascade (ortholog); cartilage development (ortholog); PARTICIPATES IN calcineurin signaling pathway; nuclear factor of activated T-cells signaling pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH dilated cardiomyopathy 1A (ortholog); JOINT CONTRACTURES, OSTEOCHONDROMAS, AND B-CELL LYMPHOMA (ortholog); nervous system disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 149394076 149523168 + 30032202 116902298 MODEL JAAIVD010000023;XM_032904736;XM_032904737;XM_032904738 XP_032760627;XP_032760628;XP_032760629 nuclear factor of activated T-cells, cytoplasmic 2 protein-coding 625867656 LOC116898247 40S ribosomal protein S10-like 4 157914482 157914972 - 116898247 MODEL JAAIVD010000003 pseudo 625867657 LOC116907154 olfactory receptor 8B3-like 8 32196284 32197213 + 22301074;30032202 116907154 MODEL JAAIVD010000027;XM_032910116 XP_032766007 protein-coding 625867660 Castor1 cytosolic arginine sensor for mTORC1 subunit 1 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); molecular sensor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to L-arginine (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) 11 73198263 73202928 + 30032202 116912248 MODEL JAAIVD010000006;XM_032916231 XP_032772122 protein-coding 625867674 LOC116884110 U4 spliceosomal RNA 14 54839472 54839610 + 116884110 MODEL JAAIVD010000009;XR_004385841 snrna 625867677 Ncoa3 nuclear receptor coactivator 3 ENCODES a protein that exhibits chromatin binding (ortholog); disordered domain specific binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cellular response to estradiol stimulus (ortholog); cerebellum development (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Bone Neoplasms (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 151889903 151931166 - 22301074;30032202 116902326 MODEL JAAIVD010000023;XM_032904776;XM_032904777;XM_032904778;XM_032904780 XP_032760667;XP_032760668;XP_032760669;XP_032760671 protein-coding 625867714 Aven apoptosis and caspase activation inhibitor INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN membrane (ortholog) 5 90820016 90946043 + 30032202 116901749 MODEL JAAIVD010000023;XM_032903889 XP_032759780 cell death regulator Aven protein-coding 625867724 Catsperd cation channel sperm associated auxiliary subunit delta INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) 4 88012493 88039595 + 22301074;30032202 116899189 MODEL JAAIVD010000003;XM_032900769 XP_032756660 cation channel sperm-associated protein subunit delta protein-coding 625867743 LOC116900768 60S ribosomal protein L13-like 5 153230323 153230948 - 116900768 MODEL JAAIVD010000023 pseudo 625867744 LOC116898145 protein transport protein Sec61 subunit gamma-like 4 115257960 115258176 - 22301074;30032202 116898145 MODEL JAAIVD010000003;XM_032899523 XP_032755414 protein-coding 625867748 LOC116906519 U4 spliceosomal RNA 7 60943227 60943309 + 116906519 MODEL JAAIVD010000026 pseudo 625867749 LOC116912678 zinc finger protein 120-like 11 14884607 14895410 - 22301074;30032202 116912678 MODEL JAAIVD010000006;XM_032916795 XP_032772686 protein-coding 625867755 LOC116902585 small nucleolar RNA SNORA17 5 90332763 90332890 + 116902585 MODEL JAAIVD010000023;XR_004388177 snorna 625867758 Rpl10 ribosomal protein L10 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation regulator activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); embryonic brain development (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) X 128274210 128276314 + 22301074;30032202 116888844 MODEL JAAIVD010000014;XM_032890113 XP_032746004 60S ribosomal protein L10 protein-coding 625867768 LOC116891656 uncharacterized LOC116891656 2 90542404 90547002 - 116891656 MODEL JAAIVD010000001;XR_004386855 ncrna 625867773 LOC116888044 60S ribosomal protein L31-like X 86617968 86619294 - 116888044 MODEL JAAIVD010000014 pseudo 625867774 LOC116894609 leukocyte-associated immunoglobulin-like receptor 1 2 184917846 184919850 + 116894609 MODEL JAAIVD010000001;XM_032896325 XP_032752216 protein-coding 625867783 Plppr1 phospholipid phosphatase related 1 ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN nervous system development (ortholog); phospholipid dephosphorylation (ortholog); FOUND IN neuron projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 7 57455622 57578205 - 30032202 116905004 MODEL JAAIVD010000026;XM_032907689 XP_032763580 phospholipid phosphatase-related protein type 1 protein-coding 625867794 Ctsh cathepsin H ENCODES a protein that exhibits aminopeptidase activity (ortholog); cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); bradykinin catabolic process (ortholog); cellular response to thyroid hormone stimulus (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Contusions (ortholog); FOUND IN acrosomal vesicle (ortholog); alveolar lamellar body (ortholog); axoneme (ortholog) 12 5281772 5300233 + 30032202 116913647 MODEL JAAIVD010000007;XM_032917916 XP_032773807 pro-cathepsin H protein-coding 625867810 Sema5a semaphorin 5A ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chondroitin sulfate proteoglycan binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog) 3 148146000 148579266 - 30032202 116897044 MODEL JAAIVD010000012;XM_032898665;XM_032898666 XP_032754556;XP_032754557 semaphorin-5A protein-coding 625867840 LOC116897460 U1 spliceosomal RNA 3 149653696 149653856 + 116897460 MODEL JAAIVD010000012;XR_004387490 snrna 625867843 Hnmt histamine N-methyltransferase ENCODES a protein that exhibits histamine N-methyltransferase activity (ortholog); N-methyltransferase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); histamine catabolic process (ortholog); histamine metabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; homocysteine metabolic pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 33547298 33580148 - 22301074 116901420 MODEL JAAIVD010000023;XM_032903308 XP_032759199 protein-coding 625867853 Wdr24 WD repeat domain 24 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog); lysosomal membrane (ortholog) 9 3089144 3094267 + 22301074;30032202 116908688 MODEL JAAIVD010000002;XM_032912002 XP_032767893 GATOR complex protein WDR24 protein-coding 625867866 LOC116895726 CCR4-NOT transcription complex subunit 8-like 3 223039033 223039893 - 116895726 MODEL JAAIVD010000012 pseudo 625867867 LOC116889838 bifunctional purine biosynthesis protein PURH-like 1 150968117 150969886 - 116889838 MODEL JAAIVD010000025 pseudo 625867868 LOC116912426 uncharacterized LOC116912426 11 4941540 4969931 - 116912426 MODEL JAAIVD010000006;XR_004389460 ncrna 625867872 Spata6 spermatogenesis associated 6 ENCODES a protein that exhibits myosin light chain binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); spermatogenesis (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) 1 44391810 44474761 + 30032202 116898929 MODEL JAAIVD010000025;XM_032900342 XP_032756233 spermatogenesis-associated protein 6 protein-coding 625867889 LOC116906272 small nuclear ribonucleoprotein E-like 7 127619812 127620807 + 22301074;30032202 116906272 MODEL JAAIVD010000026;XM_032909161 XP_032765052 protein-coding 625867893 Rps6kb1 ribosomal protein S6 kinase B1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); behavioral fear response (ortholog); cell migration (ortholog); PARTICIPATES IN insulin signaling pathway; insulin-like growth factor signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Atrophy (ortholog); autosomal dominant polycystic kidney disease (ortholog); Burns (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 9 84229507 84272843 + 22301074;30032202 116910499 MODEL JAAIVD010000002;XM_032914392;XM_032914393;XR_004389154;XR_004389155;XR_004389156 XP_032770283;XP_032770284 ribosomal protein S6 kinase beta-1 protein-coding 625867927 Slc15a3 solute carrier family 15 member 3 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); peptidoglycan transmembrane transporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); peptidoglycan transport (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) 2 10323207 10337934 + 22301074;30032202 116890970 MODEL JAAIVD010000001;XM_032891635 XP_032747526 protein-coding 625867939 LOC116911259 60 kDa heat shock protein, mitochondrial-like 10 74646460 74648204 + 22301074;30032202 116911259 MODEL JAAIVD010000005;XM_032915162 XP_032771053 protein-coding 625867944 Ppil6 peptidylprolyl isomerase like 6 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog) 18 41183334 41213820 + 22301074 116886947 MODEL JAAIVD010000013;XM_032888446;XM_032888447 XP_032744337;XP_032744338 probable inactive peptidyl-prolyl cis-trans isomerase-like 6 protein-coding 625867957 LOC116909210 dedicator of cytokinesis protein 2-like 9 7043377 7125531 - 22301074;30032202 116909210 MODEL JAAIVD010000002;XM_032912712 XP_032768603 protein-coding 625867985 LOC116886720 small nucleolar RNA SNORA65 17 16270438 16270567 + 116886720 MODEL JAAIVD010000011;XR_004386132 snorna 625867988 Atad2 ATPase family AAA domain containing 2 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 232640244 232682381 - 22301074;30032202 116911726 MODEL JAAIVD010000025;XM_032915705;XM_032915712 XP_032771596;XP_032771603 ATPase family AAA domain-containing protein 2 protein-coding 625868025 Timm17b translocase of inner mitochondrial membrane 17B FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) X 14228994 14235962 - 30032202 116889169 MODEL JAAIVD010000014;XM_032890335 XP_032746226 mitochondrial import inner membrane translocase subunit Tim17-B protein-coding 625868034 LOC116914714 beta-defensin 4 13 64941033 64943405 - 22301074;30032202 116914714 MODEL JAAIVD010000008;XM_032919145 XP_032775036 protein-coding 625868040 LOC116907690 suppressor of SWI4 1 homolog 8 17151653 17155633 + 22301074;30032202 116907690 MODEL JAAIVD010000027;XM_032910796 XP_032766687 protein-coding 625868056 LOC116889551 U2 spliceosomal RNA X 75885725 75885932 + 116889551 MODEL JAAIVD010000014 pseudo 625868057 LOC116906619 transcription initiation factor TFIID subunit 13-like 8 115012387 115012812 - 22301074;30032202 116906619 MODEL JAAIVD010000027;XM_032909376 XP_032765267 protein-coding 625868061 LOC116907097 alpha-enolase-like 8 31069292 31070445 + 116907097 MODEL JAAIVD010000027 pseudo 625868062 Foxd3 forkhead box D3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); embryonic placenta development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH glaucoma (ortholog); intellectual disability (ortholog); vitiligo (ortholog); FOUND IN chromatin (ortholog) 1 54872273 54873681 - 30032202 116887688 MODEL JAAIVD010000025;XM_032889286 XP_032745177 forkhead box protein D3 protein-coding 625868065 Pgs1 phosphatidylglycerophosphate synthase 1 PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH High Myopia (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 9 66035268 66070936 - 30032202 116908717 MODEL JAAIVD010000002;XM_032912055 XP_032767946 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, mitochondrial protein-coding 625868079 LOC116896953 metaxin-3-like 3 120700983 120702052 + 116896953 MODEL JAAIVD010000012 pseudo 625868080 Btnl2 butyrophilin like 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of interleukin-2 production (ortholog); positive regulation of T cell proliferation (ortholog); ASSOCIATED WITH berylliosis (ortholog); coronary artery disease (ortholog); Graves' disease (ortholog) 18 7058234 7071945 + 30032202 116887270 MODEL JAAIVD010000013;XM_032888840 XP_032744731 butyrophilin-like protein 2 protein-coding 625868094 LOC116898582 40S ribosomal protein S25-like 4 166510731 166511107 + 116898582 MODEL JAAIVD010000003 pseudo 625868095 LOC116895963 olfactory receptor 10AG1-like 3 145016689 145055853 + 116895963 MODEL JAAIVD010000012 pseudo 625868096 Crhr2 corticotropin releasing hormone receptor 2 ENCODES a protein that exhibits corticotrophin-releasing factor receptor activity (ortholog); corticotropin-releasing hormone receptor activity (ortholog); hormone activity (ortholog); INVOLVED IN actin filament organization (ortholog); catecholamine biosynthetic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Anorexia (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body fiber (ortholog) 6 85957104 85984188 + 22301074;30032202 116902825 MODEL JAAIVD010000024;XM_032905154;XM_032905155 XP_032761045;XP_032761046 corticotropin-releasing factor receptor 2 protein-coding 625868114 Oprd1 opioid receptor delta 1 ENCODES a protein that exhibits G protein-coupled enkephalin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon terminus (ortholog); dendrite membrane (ortholog); membrane (ortholog) 1 26103521 26137249 + 22301074;30032202 116895625 MODEL JAAIVD010000025;XM_032896837 XP_032752728 delta-type opioid receptor protein-coding 625868121 LOC116897737 nucleoside diphosphate kinase, mitochondrial-like 4 114692753 114693242 + 116897737 MODEL JAAIVD010000003 pseudo 625868122 LOC116910712 small nucleolar RNA SNORA17 9 44184575 44184706 + 116910712 MODEL JAAIVD010000002;XR_004389239 snorna 625868125 LOC116884567 protocadherin beta-15-like 15 1146107 1149722 + 22301074 116884567 MODEL JAAIVD010000010;XM_032885709 XP_032741600 protein-coding 625868130 LOC116884883 UBA-like domain-containing protein 2 15 33298394 33300500 + 116884883 MODEL JAAIVD010000010 pseudo 625868131 LOC116904993 thyroid hormone receptor-associated protein 3 7 55370962 55374465 + 30032202 116904993 MODEL JAAIVD010000026;XM_032907676 XP_032763567 protein-coding 625868136 LOC116901388 uncharacterized LOC116901388 5 23129950 23164897 + 116901388 MODEL JAAIVD010000023;XR_004387985 ncrna 625868141 Klhl22 kelch like family member 22 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell division (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN centrosome (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 3018982 3058024 + 22301074;30032202 116898651 MODEL JAAIVD010000003;XM_032899881;XM_032899882 XP_032755772;XP_032755773 kelch-like protein 22 protein-coding 625868155 LOC116899157 zinc finger protein 431-like 4 87307208 87334874 - 22301074 116899157 MODEL JAAIVD010000003;XM_032900715;XM_032900716 XP_032756606;XP_032756607 protein-coding 625868166 Zfand2b zinc finger AN1-type containing 2B ENCODES a protein that exhibits K48-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein targeting to ER (ortholog); regulation of insulin-like growth factor receptor signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); proteasome complex (ortholog) 4 148527732 148530796 + 22301074;30032202 116899521 MODEL JAAIVD010000003;XM_032901380;XM_032901381 XP_032757271;XP_032757272 AN1-type zinc finger protein 2B protein-coding 625868183 Emc4 ER membrane protein complex subunit 4 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 90685952 90690543 - 30032202 116901742 MODEL JAAIVD010000023;XM_032903877 XP_032759768 protein-coding 625868192 Hpcal1 hippocalcin like 1 INVOLVED IN liver development (ortholog); ASSOCIATED WITH cataract 13 with adult i phenotype (ortholog); Experimental Liver Cirrhosis (ortholog) 7 37483327 37588867 + 22301074;30032202 116904904 MODEL JAAIVD010000026;XM_032907510;XM_032907511;XM_032907513 XP_032763401;XP_032763402;XP_032763404 hippocalcin-like protein 1 protein-coding 625868205 LOC116901012 39S ribosomal protein L47, mitochondrial-like 5 118372484 118373344 + 116901012 MODEL JAAIVD010000023 pseudo 625868206 Ak2 adenylate kinase 2 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleobase-containing compound kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); dATP metabolic process (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo purine biosynthetic pathway; tenofovir pharmacokinetics pathway; ASSOCIATED WITH COVID-19 (ortholog); Deafness (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) 1 29119757 29138078 - 22301074;30032202 116896313 MODEL JAAIVD010000025;XM_032897406;XM_032897412 XP_032753297;XP_032753303 adenylate kinase 2, mitochondrial protein-coding 625868222 LOC116901074 zinc finger protein 844-like 5 142849238 142863880 - 116901074 MODEL JAAIVD010000023 pseudo 625868223 Ccnb2 cyclin B2 INVOLVED IN G2/MI transition of meiotic cell cycle (ortholog); in utero embryonic development (ortholog); negative regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 64766911 64780130 - 22301074;30032202 116907344 MODEL JAAIVD010000027;XM_032910280 XP_032766171 G2/mitotic-specific cyclin-B2 protein-coding 625868236 LOC116910440 60S ribosomal protein L7a-like 9 6510808 6511605 + 116910440 MODEL JAAIVD010000002 pseudo 625868237 Rassf2 Ras association domain family member 2 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bone remodeling (ortholog); canonical NF-kappaB signal transduction (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Lymphatic Metastasis (ortholog); Nasopharyngeal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 5 111711257 111748765 - 22301074;30032202 116901996 MODEL JAAIVD010000023;XM_032904255 XP_032760146 ras association domain-containing protein 2 protein-coding 625868252 Fgfbp1 fibroblast growth factor binding protein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 11 61787514 61788599 + 30032202 116912802 MODEL JAAIVD010000006;XM_032916968 XP_032772859 fibroblast growth factor-binding protein 1 protein-coding 625868257 Ptchd3 patched domain containing 3 FOUND IN endoplasmic reticulum (ortholog); sperm midpiece (ortholog) 9 62193256 62204277 - 22301074;30032202 116910059 MODEL JAAIVD010000002;XM_032913870 XP_032769761 patched domain-containing protein 3 protein-coding 625868265 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 842244 842316 - 116910819 MODEL JAAIVD010000002 trna 625868266 Znf831 zinc finger protein 831 ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog) 5 143271529 143342522 - 116902262 MODEL JAAIVD010000023;XM_032904681;XM_032904682 XP_032760572;XP_032760573 protein-coding 625868278 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31433633 31433704 - 116910829 MODEL JAAIVD010000002 trna 625868279 LOC116911859 small nucleolar RNA U109 10 23698308 23698442 + 116911859 MODEL JAAIVD010000005;XR_004389381 snorna 625868282 LOC116896216 histone H2A.Z ENCODES a protein that exhibits chromatin DNA binding (ortholog); nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to insulin stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Barr body (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 3 21308641 21310975 - 22301074;30032202 116896216 MODEL JAAIVD010000012;XM_032897271 XP_032753162 protein-coding 625868291 Ubash3b ubiquitin associated and SH3 domain containing B ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN collagen-activated signaling pathway (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); establishment of localization in cell (ortholog) 8 35598313 35745065 - 22301074;30032202 116908299 MODEL JAAIVD010000027;XM_032911579 XP_032767470 ubiquitin-associated and SH3 domain-containing protein B protein-coding 625868309 Cog1 component of oligomeric golgi complex 1 INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIg (ortholog); Enterovirus Infections (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi transport complex (ortholog) 9 75643804 75656192 - 30032202 116909176 MODEL JAAIVD010000002;XM_032912666 XP_032768557 conserved oligomeric Golgi complex subunit 1 protein-coding 625868326 LOC116887111 keratin-associated protein 12-1 18 1060704 1061066 + 22301074;30032202 116887111 MODEL JAAIVD010000013;XM_032888651;XM_032888652 XP_032744542;XP_032744543 protein-coding 625868332 LOC116913036 U6 spliceosomal RNA 11 8288157 8288263 + 116913036 MODEL JAAIVD010000006;XR_004389573 snrna 625868335 Cnn3 calponin 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of ATP-dependent activity (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); dendrite (ortholog) 3 38405219 38444924 - 22301074 116896310 MODEL JAAIVD010000012;XM_032897398 XP_032753289 calponin-3 protein-coding 625868346 LOC116900369 olfactory receptor 10AG1-like 5 69435421 69436371 + 22301074 116900369 MODEL JAAIVD010000023;XM_032902118 XP_032758009 protein-coding 625868350 LOC116911389 uncharacterized LOC116911389 10 57846117 57848242 - 116911389 MODEL JAAIVD010000005;XR_004389325 ncrna 625868355 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 101748121 101748193 - 116897696 MODEL JAAIVD010000012 trna 625868356 LOC116890212 transmembrane and death domain protein 1-like 1 262047703 262048788 + 22301074 116890212 MODEL JAAIVD010000025;XM_032890952 XP_032746843 protein-coding 625868359 LOC116909330 olfactory receptor 1361-like 9 25767906 25768884 + 22301074;30032202 116909330 MODEL JAAIVD010000002;XM_032912871 XP_032768762 protein-coding 625868362 Znf385d zinc finger protein 385D ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); substance-related disorder (ortholog) 12 87715183 88066422 - 22301074;30032202 116914051 MODEL JAAIVD010000007;XM_032918333 XP_032774224 protein-coding 625868374 Oasl 2'-5'-oligoadenylate synthetase like ENCODES a protein that exhibits 2'-5'-oligoadenylate synthetase activity (ortholog); DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN interleukin-27-mediated signaling pathway (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of RIG-I signaling pathway (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 16 38888529 38900051 - 22301074;30032202 116885530 MODEL JAAIVD010000004;XM_032886827;XM_032886828 XP_032742718;XP_032742719 2'-5'-oligoadenylate synthase-like protein protein-coding 625868388 Dtd1 D-aminoacyl-tRNA deacylase 1 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN mitochondrion (ortholog) 5 124247921 124283112 + 22301074;30032202 116902052 MODEL JAAIVD010000023;XM_032904337 XP_032760228 protein-coding 625868396 Polr1c RNA polymerase I and III subunit C PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH genetic disease (ortholog); Hearing Loss (ortholog); hypomyelinating leukodystrophy 11 (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 4 83623241 83627326 + 22301074;30032202 116899115 MODEL JAAIVD010000003;XM_032900635 XP_032756526 DNA-directed RNA polymerases I and III subunit RPAC1 protein-coding 625868409 Slc46a1 solute carrier family 46 member 1 ENCODES a protein that exhibits folic acid transmembrane transporter activity (ortholog); folic acid:proton symporter activity (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN folate import across plasma membrane (ortholog); folate transmembrane transport (ortholog); folic acid transport (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH anemia (ortholog); chronic kidney disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 9 91970461 91976917 - 22301074;30032202 116909634 MODEL JAAIVD010000002;XM_032913275 XP_032769166 proton-coupled folate transporter protein-coding 625868418 Tmsb15b thymosin beta 15B INVOLVED IN positive regulation of cell migration (ortholog) X 88890543 88893043 + 22301074;30032202 116888513 MODEL JAAIVD010000014;XM_032889813 XP_032745704 thymosin beta-15B protein-coding 625868425 LOC116894081 olfactory receptor 52D1-like 2 103152829 103153815 + 116894081 MODEL JAAIVD010000001 pseudo 625868426 LOC116900011 tetratricopeptide repeat protein 14-like 5 10178116 10179035 - 116900011 MODEL JAAIVD010000023 pseudo 625868427 LOC116911934 alpha-centractin-like 11 88316233 88317245 - 116911934 MODEL JAAIVD010000006 pseudo 625868428 LOC116888996 40S ribosomal protein S12-like 1 113437863 113438260 - 116888996 MODEL JAAIVD010000025 pseudo 625868429 LOC116897785 60S ribosomal protein L13a-like 4 8566411 8566960 - 116897785 MODEL JAAIVD010000003 pseudo 625868430 LOC116904263 spermatogenesis-associated protein 31A3-like 6 37848972 37854401 + 116904263 MODEL JAAIVD010000024;XM_032907213 XP_032763104 protein-coding 625868436 LOC116898171 tRNA N(3)-methylcytidine methyltransferase METTL6-like 4 125202260 125203234 - 116898171 MODEL JAAIVD010000003 pseudo 625868437 Spsb1 splA/ryanodine receptor domain and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog) 1 10802456 10860685 + 22301074;30032202 116892538 MODEL JAAIVD010000025;XM_032894303;XM_032894311;XM_032894320;XM_032894329 XP_032750194;XP_032750202;XP_032750211;XP_032750220 SPRY domain-containing SOCS box protein 1 protein-coding 625868452 LOC116896513 histone H2A type 2-A 3 61036600 61037078 - 22301074;30032202 116896513 MODEL JAAIVD010000012;XM_032897694 XP_032753585 protein-coding 625868457 Ube2k ubiquitin conjugating enzyme E2 K ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); free ubiquitin chain polymerization (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); FOUND IN cytoplasm (ortholog); filopodium tip (ortholog); nucleus (ortholog) 11 22585575 22643442 + 22301074;30032202 116912824 MODEL JAAIVD010000006;XM_032917004;XM_032917005 XP_032772895;XP_032772896 ubiquitin-conjugating enzyme E2 K protein-coding 625868471 Ms4a14 membrane spanning 4-domains A14 ASSOCIATED WITH essential tremor (ortholog) 2 10755141 10770177 - 30032202 116893644 MODEL JAAIVD010000001;XM_032895361 XP_032751252 membrane-spanning 4-domains subfamily A member 14 protein-coding 625868479 Dnd1 DND microRNA-mediated repression inhibitor 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); germ cell development (ortholog); negative regulation of miRNA-mediated gene silencing (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); teratocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); focal adhesion (ortholog) 15 7614144 7616974 + 22301074;30032202 116884288 MODEL JAAIVD010000010;XM_032885385 XP_032741276 dead end protein homolog 1 protein-coding 625868487 LOC116885984 U6 spliceosomal RNA 16 20088379 20088478 + 116885984 MODEL JAAIVD010000004 pseudo 625868488 LOC116895254 serine protease inhibitor Kazal-type 12 3 255911 259199 + 22301074 116895254 MODEL JAAIVD010000012;XM_032896572 XP_032752463 protein-coding 625868495 Sdhc succinate dehydrogenase complex subunit C ENCODES a protein that exhibits heme binding (ortholog); protein-membrane adaptor activity (ortholog); PARTICIPATES IN citric acid cycle pathway; electron transport chain pathway; fumaric aciduria pathway; ASSOCIATED WITH breast cancer (ortholog); Carney Triad (ortholog); Carney-Stratakis syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex II (succinate dehydrogenase) (ortholog) 10 50290245 50311185 - 22301074;30032202 116911095 MODEL JAAIVD010000005;XM_032914926 XP_032770817 succinate dehydrogenase cytochrome b560 subunit, mitochondrial protein-coding 625868505 Parn poly(A)-specific ribonuclease ENCODES a protein that exhibits cation binding (ortholog); poly(A)-specific ribonuclease activity (ortholog); protein kinase binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA 3'-end processing (ortholog); lncRNA processing (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 6 (ortholog); dyskeratosis congenita (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 8604998 8734897 - 22301074;30032202 116908588 MODEL JAAIVD010000002;XM_032911804;XM_032911805;XM_032911806;XM_032911807 XP_032767695;XP_032767696;XP_032767697;XP_032767698 poly(A)-specific ribonuclease PARN protein-coding 625868543 Kcnt1 potassium sodium-activated channel subfamily T member 1 ENCODES a protein that exhibits chloride-activated potassium channel activity (ortholog); intracellular sodium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); protein homotetramerization (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy 1 (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN plasma membrane (ortholog); postsynaptic density membrane (ortholog) 5 11169421 11222230 - 22301074;30032202 116901282 MODEL JAAIVD010000023;XM_032903060;XM_032903061;XM_032903062;XM_032903063;XM_032903064;XM_032903065;XM_032903066;XM_032903067;XM_032903068;XM_032903070;XM_032903071;XM_032903072 XP_032758951;XP_032758952;XP_032758953;XP_032758954;XP_032758955;XP_032758956;XP_032758957;XP_032758958;XP_032758959;XP_032758961;XP_032758962;XP_032758963 potassium channel subfamily T member 1 protein-coding 625868598 Leng9 leukocyte receptor cluster member 9 ASSOCIATED WITH myoepithelioma (ortholog) 2 176658512 176661070 - 22301074 116892641 MODEL JAAIVD010000001;XM_032894461 XP_032750352 protein-coding 625868603 Ccdc184 coiled-coil domain containing 184 FOUND IN cytoplasm (ortholog) 1 270985146 270987452 + 30032202 116884687 MODEL JAAIVD010000025;XM_032885872 XP_032741763 coiled-coil domain-containing protein 184 protein-coding 625868608 Rab33a RAB33A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); X-linked deafness 5 (ortholog) X 109884167 109895167 - 22301074;30032202 116889024 MODEL JAAIVD010000014;XM_032890227 XP_032746118 ras-related protein Rab-33A protein-coding 625868614 LOC116899935 U2 spliceosomal RNA 4 145832661 145832851 + 116899935 MODEL JAAIVD010000003;XR_004387902 snrna 625868617 Pdcd11 programmed cell death 11 ENCODES a protein that exhibits NF-kappaB binding (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleus (ortholog) 2 46624930 46662771 + 22301074;30032202 116891264 MODEL JAAIVD010000001;XM_032892153 XP_032748044 protein RRP5 homolog protein-coding 625868656 Prrc1 proline rich coiled-coil 1 ENCODES a protein that exhibits identical protein binding (ortholog) 15 74468861 74497354 - 30032202 116884568 MODEL JAAIVD010000010;XM_032885710 XP_032741601 protein PRRC1 protein-coding 625868669 Tmco4 transmembrane and coiled-coil domains 4 1 19143980 19209190 - 116893783 MODEL JAAIVD010000025;XM_032895488 XP_032751379 transmembrane and coiled-coil domain-containing protein 4 protein-coding 625868686 Iqgap3 IQ motif containing GTPase activating protein 3 ENCODES a protein that exhibits calmodulin binding (ortholog); myosin VI light chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); lateral plasma membrane (ortholog) 3 65441713 65484447 - 22301074;30032202 116896701 MODEL JAAIVD010000012;XM_032898108 XP_032753999 ras GTPase-activating-like protein IQGAP3 protein-coding 625868728 Duoxa2 dual oxidase maturation factor 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN hydrogen peroxide metabolic process (ortholog); intracellular protein localization (ortholog); positive regulation of cell motility (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); familial thyroid dyshormonogenesis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cytosol (ortholog) 5 100405135 100408917 + 22301074;30032202 116901886 MODEL JAAIVD010000023;XM_032904093 XP_032759984 protein-coding 625868738 Aoc2 amine oxidase copper containing 2 ENCODES a protein that exhibits primary methylamine oxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); silicosis (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 9 60626917 60632538 + 22301074;30032202 116910574 MODEL JAAIVD010000002;XM_032914498 XP_032770389 retina-specific copper amine oxidase protein-coding 625868746 Filip1l filamin A interacting protein 1 like INVOLVED IN gene expression (ortholog); hindgut development (ortholog); intracellular protein localization (ortholog); FOUND IN centrosome (ortholog) 4 41672042 41675192 + 116898910 MODEL JAAIVD010000003;XM_032900317 XP_032756208 filamin A-interacting protein 1-like protein-coding 625868751 Osgep O-sialoglycoprotein endopeptidase ENCODES a protein that exhibits tRNA N(6)-L-threonylcarbamoyladenine synthase activity (ortholog); INVOLVED IN tRNA modification (ortholog); tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); EKC/KEOPS complex (ortholog) 12 72390594 72398047 + 22301074;30032202 116913377 MODEL JAAIVD010000007;XM_032917547 XP_032773438 probable tRNA N6-adenosine threonylcarbamoyltransferase protein-coding 625868766 Actmap actin maturation protease ENCODES a protein that exhibits cysteine-type aminopeptidase activity (ortholog); initiator methionyl aminopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog) 2 168737131 168746375 - 116892440 MODEL JAAIVD010000001;XM_032894129;XM_032894130;XM_032894132;XM_032894133 XP_032750020;XP_032750021;XP_032750023;XP_032750024 C2H19orf54 UPF0692 protein C19orf54 homolog;chromosome 2 C19orf54 homolog protein-coding 625868787 Wdr47 WD repeat domain 47 INVOLVED IN adult locomotory behavior (ortholog); anterior commissure morphogenesis (ortholog); autophagy (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 3 49613200 49673156 - 22301074 116896356 MODEL JAAIVD010000012;XM_032897463 XP_032753354 WD repeat-containing protein 47 protein-coding 625868806 LOC116902663 U6 spliceosomal RNA 5 131834128 131834234 + 116902663 MODEL JAAIVD010000023;XR_004388225 snrna 625868809 Cep152 centrosomal protein 152 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); primary autosomal recessive microcephaly 9 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 103889253 103959748 - 30032202 116901905 MODEL JAAIVD010000023;XM_032904119 XP_032760010 centrosomal protein of 152 kDa protein-coding 625868841 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 30018395 30018466 + 116904827 MODEL JAAIVD010000024 trna 625868842 Ntpcr nucleoside-triphosphatase, cancer-related ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); PARTICIPATES IN thiamine metabolic pathway; FOUND IN mitochondrion (ortholog) 17 45250405 45264361 + 22301074;30032202 116886464 MODEL JAAIVD010000011;XM_032887965 XP_032743856 cancer-related nucleoside-triphosphatase protein-coding 625868851 LOC116886214 60S ribosomal protein L27-like 17 44528746 44529153 - 116886214 MODEL JAAIVD010000011 pseudo 625868852 LOC116906830 60S ribosomal protein L17-like 8 60554194 60554751 - 116906830 MODEL JAAIVD010000027 pseudo 625868853 Dusp7 dual specificity phosphatase 7 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog) 8 97670276 97677403 + 22301074;30032202 116907478 MODEL JAAIVD010000027;XM_032910465 XP_032766356 dual specificity protein phosphatase 7 protein-coding 625868860 LOC116912635 kelch repeat and BTB domain-containing protein 8-like 11 1485617 1487407 + 116912635 MODEL JAAIVD010000006 pseudo 625868861 LOC116893067 cytochrome P450 2C12, female-specific 2 39119164 39177051 + 22301074;30032202 116893067 MODEL JAAIVD010000001;XM_032895025 XP_032750916 protein-coding 625868874 LOC116890579 U1 spliceosomal RNA 1 233345129 233345284 - 116890579 MODEL JAAIVD010000025;XR_004386742 snrna 625868877 Pik3r5 phosphoinositide-3-kinase regulatory subunit 5 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH ataxia with oculomotor apraxia type 3 (ortholog); colon cancer (ortholog); spastic ataxia (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 48033244 48097934 + 22301074;30032202 116909050 MODEL JAAIVD010000002;XM_032912530 XP_032768421 phosphoinositide 3-kinase regulatory subunit 5 protein-coding 625868900 Pm20d2 peptidase M20 domain containing 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); FOUND IN nucleoplasm (ortholog) 1 109850366 109867026 + 22301074;30032202 116902316 MODEL JAAIVD010000025;XM_032904766 XP_032760657 peptidase M20 domain-containing protein 2 protein-coding 625868911 LOC116912620 60S ribosomal protein L18-like 11 71073914 71076529 - 116912620 MODEL JAAIVD010000006 pseudo 625868912 LOC116889454 U6 spliceosomal RNA X 56634756 56634862 - 116889454 MODEL JAAIVD010000014;XR_004386412 snrna 625868915 LOC116886497 40S ribosomal protein S18-like 17 4136825 4137309 + 116886497 MODEL JAAIVD010000011 pseudo 625868916 LOC116889122 protein ARMCX6-like X 87047162 87050160 - 30032202 116889122 MODEL JAAIVD010000014;XM_032890294 XP_032746185 protein-coding 625868924 Col4a4 collagen type IV alpha 4 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); molecular adaptor activity (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Alport syndrome (ortholog); atypical hemolytic-uremic syndrome (ortholog); autosomal dominant Alport syndrome (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) 4 155331751 155450325 - 22301074 116899563 MODEL JAAIVD010000003;XM_032901460 XP_032757351 collagen alpha-4(IV) chain protein-coding 625868976 Dhdds dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN dolichyl diphosphate biosynthetic process (ortholog); obsolete dolichol biosynthetic process (ortholog); ASSOCIATED WITH developmental delay and seizures with or without movement abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog) 1 24240539 24267851 + 30032202 116894920 MODEL JAAIVD010000025;XM_032896503;XM_032896504 XP_032752394;XP_032752395 dehydrodolichyl diphosphate synthase complex subunit DHDDS protein-coding 625868992 Plekhm2 pleckstrin homology and RUN domain containing M2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosome localization (ortholog); natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN endosome membrane (ortholog); lysosomal membrane (ortholog) 1 16485195 16521995 + 30032202 116893274 MODEL JAAIVD010000025;XM_032895122;XM_032895123 XP_032751013;XP_032751014 pleckstrin homology domain-containing family M member 2 protein-coding 625869017 LOC116886371 thymosin beta-10 1 14922604 14923073 + 22301074;30032202 116886371 MODEL JAAIVD010000025;XM_032887838 XP_032743729 protein-coding 625869022 Mrpl12 mitochondrial ribosomal protein L12 INVOLVED IN mitochondrial transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); combined oxidative phosphorylation deficiency 45 (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 63536053 63540108 - 22301074;30032202 116909586 MODEL JAAIVD010000002;XM_032913209 XP_032769100 39S ribosomal protein L12, mitochondrial protein-coding 625869030 LOC116907168 olfactory receptor 7G2-like 8 15256239 15257198 + 22301074;30032202 116907168 MODEL JAAIVD010000027;XM_032910123 XP_032766014 protein-coding 625869034 LOC116908216 myosin light polypeptide 6-like 8 73020039 73024204 - 116908216 MODEL JAAIVD010000027 pseudo 625869035 LOC116900950 olfactory receptor 4F15-like 5 90479325 90481506 + 116900950 MODEL JAAIVD010000023 pseudo 625869036 LOC116899849 small nucleolar RNA SNORA17 4 77582345 77582477 - 116899849 MODEL JAAIVD010000003;XR_004387845 snorna 625869039 LOC116893072 lamin tail domain-containing protein 1-like 1 64429511 64444001 + 116893072 MODEL JAAIVD010000025 pseudo 625869040 Bbs5 Bardet-Biedl syndrome 5 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 5 (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centriolar satellite (ortholog) 5 46950280 46970556 + 22301074;30032202 116901482 MODEL JAAIVD010000023;XM_032903436;XM_032903437 XP_032759327;XP_032759328 Bardet-Biedl syndrome 5 protein protein-coding 625869058 Topbp1 DNA topoisomerase II binding protein 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); identical protein binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN actin cytoskeleton (ortholog); BRCA1-B complex (ortholog); chromosome (ortholog) 8 94606198 94650510 + 30032202 116907407 MODEL JAAIVD010000027;XM_032910364 XP_032766255 DNA topoisomerase 2-binding protein 1 protein-coding 625869090 Taf11 TATA-box binding protein associated factor 11 ENCODES a protein that exhibits DNA binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 5949883 5957898 + 22301074;30032202 116886853 MODEL JAAIVD010000013;XM_032888308 XP_032744199 transcription initiation factor TFIID subunit 11 protein-coding 625869100 Setdb2 SET domain bifurcated histone lysine methyltransferase 2 ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cell cycle (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 64937264 64969122 + 22301074;30032202 116913071 MODEL JAAIVD010000007;XM_032917203 XP_032773094 histone-lysine N-methyltransferase SETDB2 protein-coding 625869118 LOC116915160 U6 spliceosomal RNA 13 34084436 34084542 - 116915160 MODEL JAAIVD010000008;XR_004389824 snrna 625869121 LOC116908060 olfactory receptor 8D2-like 8 82752722 82753654 + 22301074;30032202 116908060 MODEL JAAIVD010000027;XM_032911330 XP_032767221 protein-coding 625869124 Sulf2 sulfatase 2 ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); endometriosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 5 151832009 151889224 + 22301074;30032202 116902327 MODEL JAAIVD010000023;XM_032904781 XP_032760672 extracellular sulfatase Sulf-2 protein-coding 625869148 Dao D-amino acid oxidase ENCODES a protein that exhibits D-amino-acid dehydrogenase activity (ortholog); D-amino-acid oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN D-alanine catabolic process (ortholog); D-amino acid catabolic process (ortholog); D-serine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 16 39936946 39957596 - 22301074;30032202 116885348 MODEL JAAIVD010000004;XM_032886623 XP_032742514 D-amino-acid oxidase protein-coding 625869164 LOC116900874 alpha-enolase-like 5 68966195 68967029 - 116900874 MODEL JAAIVD010000023 pseudo 625869165 Itgae integrin subunit alpha E PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 9 42366293 42422662 - 22301074;30032202 116909768 MODEL JAAIVD010000002;XM_032913455 XP_032769346 integrin alpha-E protein-coding 625869200 LOC116885295 inactive 2'-5' oligoadenylate synthetase 1C-like 16 33004251 33013201 + 30032202 116885295 MODEL JAAIVD010000004;XM_032886543 XP_032742434 protein-coding 625869210 LOC116914952 ral guanine nucleotide dissociation stimulator-like 13 11845415 11846866 + 116914952 MODEL JAAIVD010000008;XM_032919371 XP_032775262 protein-coding 625869215 G6pd glucose-6-phosphate dehydrogenase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-glucose binding (ortholog); glucose-6-phosphate dehydrogenase activity (ortholog); INVOLVED IN angiotensin-mediated vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); ALAD-Deficiency Porphyria (ortholog); anemia (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) X 128410427 128430194 - 22301074;30032202 116888340 MODEL JAAIVD010000014;XM_032889611 XP_032745502 glucose-6-phosphate 1-dehydrogenase protein-coding 625869232 LOC116900324 olfactory receptor 1052-like 5 64425942 64426880 - 22301074;30032202 116900324 MODEL JAAIVD010000023;XM_032902080 XP_032757971 protein-coding 625869235 LOC116904368 40S ribosomal protein SA-like 6 84455615 84456499 + 116904368 MODEL JAAIVD010000024 pseudo 625869236 Brcc3 BRCA1/BRCA2-containing complex subunit 3 ENCODES a protein that exhibits enzyme regulator activity (ortholog); K63-linked deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); chromatin remodeling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Occupational Diseases (ortholog); Pregnancy in Diabetics (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) 4 88526427 88529274 + 22301074;30032202 116899214 MODEL JAAIVD010000003;XM_032900808 XP_032756699 lys-63-specific deubiquitinase BRCC36 protein-coding 625869241 Znf384 zinc finger protein 384 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); positive regulation of protein secretion (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN focal adhesion (ortholog) 6 22857543 22887258 - 30032202 116903265 MODEL JAAIVD010000024;XM_032905661;XM_032905662;XM_032905664;XM_032905665;XM_032905666;XM_032905667;XM_032905668;XM_032905669;XM_032905670;XM_032905671;XM_032905672;XM_032905673;XM_032905675 XP_032761552;XP_032761553;XP_032761555;XP_032761556;XP_032761557;XP_032761558;XP_032761559;XP_032761560;XP_032761561;XP_032761562;XP_032761563;XP_032761564;XP_032761566 protein-coding 625869279 Gmcl1 germ cell-less 1, spermatogenesis associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear matrix (ortholog) 6 59577777 59617459 + 22301074;30032202 116903546 MODEL JAAIVD010000024;XM_032906159 XP_032762050 germ cell-less protein-like 1 protein-coding 625869297 Lrfn1 leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN regulation of postsynaptic density assembly (ortholog); FOUND IN cell surface (ortholog); postsynaptic density membrane (ortholog) 2 167525814 167543571 - 22301074 116892388 MODEL JAAIVD010000001;XM_032894054;XM_032894055;XM_032894056;XM_032894057;XM_032894058 XP_032749945;XP_032749946;XP_032749947;XP_032749948;XP_032749949 leucine-rich repeat and fibronectin type III domain-containing protein 1 protein-coding 625869318 Oga O-GlcNAcase ENCODES a protein that exhibits [protein]-3-O-(N-acetyl-D-glucosaminyl)-L-serine/L-threonine O-N-acetyl-alpha-D-glucosaminase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN dATP metabolic process (ortholog); N-acetylglucosamine metabolic process (ortholog); negative regulation of cardiac muscle adaptation (ortholog); PARTICIPATES IN hexosamine biosynthetic pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 2 45223444 45260179 - 30032202 116891230 MODEL JAAIVD010000001;XM_032892079 XP_032747970 protein O-GlcNAcase protein-coding 625869338 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92711659 92711730 + 116904841 MODEL JAAIVD010000024 trna 625869339 LOC116894031 olfactory receptor 52Z1-like 2 102081536 102082501 - 22301074 116894031 MODEL JAAIVD010000001;XM_032895749 XP_032751640 protein-coding 625869342 Rfx8 regulatory factor X8 4 115916749 115977797 - 30032202 116898146 MODEL JAAIVD010000003;XM_032899524 XP_032755415 DNA-binding protein RFX8;RFX family member 8, lacking RFX DNA binding domain protein-coding 625869361 Fsip2 fibrous sheath interacting protein 2 INVOLVED IN flagellated sperm motility (ortholog); protein localization to cilium (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH spermatogenic failure 34 (ortholog); FOUND IN sperm end piece (ortholog); sperm head-tail coupling apparatus (ortholog); sperm midpiece (ortholog) 5 59986184 60058140 + 116900219 MODEL JAAIVD010000023;XM_032901974 XP_032757865 fibrous sheath-interacting protein 2 protein-coding 625869387 Minpp1 multiple inositol-polyphosphate phosphatase 1 ENCODES a protein that exhibits bisphosphoglycerate 3-phosphatase activity (ortholog); inositol bisphosphate phosphatase activity (ortholog); inositol hexakisphosphate phosphatase activity (ortholog); INVOLVED IN bone mineralization (ortholog); intracellular monoatomic cation homeostasis (ortholog); ossification (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Follicular Thyroid Cancer (ortholog); pontocerebellar hypoplasia type 16 (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 2 32528799 32553560 + 30032202 116891091 MODEL JAAIVD010000001;XM_032891807;XM_032891808 XP_032747698;XP_032747699 multiple inositol polyphosphate phosphatase 1 protein-coding 625869400 LOC116896160 transmembrane protein 256-like 3 9365622 9366109 - 116896160 MODEL JAAIVD010000012;XM_032897153 XP_032753044 protein-coding 625869405 LOC116888538 transcriptional regulator ATRX-like X 65343023 65348676 - 116888538 MODEL JAAIVD010000014;XM_032889844 XP_032745735 protein-coding 625869413 LOC116908053 apoptosis regulator BAX-like 8 88498757 88499269 + 116908053 MODEL JAAIVD010000027 pseudo 625869414 Nt5c3a 5'-nucleotidase, cytosolic IIIA ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); CMP catabolic process (ortholog); ASSOCIATED WITH Chloracne (ortholog); congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 6 84094785 84135388 + 22301074;30032202 116903741 MODEL JAAIVD010000024;XM_032906423;XM_032906424;XM_032906426 XP_032762314;XP_032762315;XP_032762317 cytosolic 5'-nucleotidase 3A protein-coding 625869434 Sumf2 sulfatase modifying factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH mucosulfatidosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 16 24155444 24173275 - 30032202 116885233 MODEL JAAIVD010000004;XM_032886471 XP_032742362 inactive C-alpha-formylglycine-generating enzyme 2 protein-coding 625869447 Ssh1 slingshot protein phosphatase 1 ENCODES a protein that exhibits actin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell morphogenesis (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Neointima (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cell leading edge (ortholog); cell projection (ortholog); cytoplasm (ortholog) 16 39965375 40021875 + 22301074;30032202 116885360 MODEL JAAIVD010000004;XM_032886634 XP_032742525 protein phosphatase Slingshot homolog 1 protein-coding 625869466 Blzf1 basic leucine zipper nuclear factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) 10 43516537 43527513 - 30032202 116911068 MODEL JAAIVD010000005;XM_032914836 XP_032770727 golgin-45 protein-coding 625869475 Kmt2d lysine methyltransferase 2D ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone H3K4 methyltransferase activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); in utero embryonic development (ortholog); oocyte growth (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 26 (ortholog); FOUND IN MLL3/4 complex (ortholog) 1 271653647 271692887 - 22301074;30032202 116884869 MODEL JAAIVD010000025;XM_032886113 XP_032742004 histone-lysine N-methyltransferase 2D protein-coding 625869535 LOC116903815 MICOS complex subunit MIC13-like 6 89552591 89552910 + 30032202 116903815 MODEL JAAIVD010000024;XM_032906519 XP_032762410 protein-coding 625869539 LOC116895190 40S ribosomal protein S6-like 3 206270249 206279967 - 22301074;30032202 116895190 MODEL JAAIVD010000012;XM_032896534 XP_032752425 protein-coding 625869543 LOC116910657 U1 spliceosomal RNA 9 83347509 83347672 - 116910657 MODEL JAAIVD010000002;XR_004389191 snrna 625869546 Il22 interleukin 22 INVOLVED IN response to glucocorticoid (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); asthma (ortholog); autoimmune hepatitis (ortholog); FOUND IN extracellular space (ortholog) 1 196297650 196302835 + 22301074 116890028 MODEL JAAIVD010000025;XM_032890806 XP_032746697 interleukin-22 protein-coding 625869554 LOC116912938 U7 small nuclear RNA 11 59724793 59724852 + 116912938 MODEL JAAIVD010000006;XR_004389507 snrna 625869557 LOC116913692 histone deacetylase 1-like 12 53976877 53978315 - 116913692 MODEL JAAIVD010000007;XR_004389637 pseudo 625869560 Myh7b myosin heavy chain 7B INVOLVED IN regulation of calcium-mediated signaling (ortholog); regulation of CAMKK-AMPK signaling cascade (ortholog); regulation of cardiac muscle cell contraction (ortholog); ASSOCIATED WITH Contracture (ortholog); Dilated Cardiomyopathy with Left Ventricular Noncompaction (ortholog); Dwarfism (ortholog); FOUND IN cardiac myofibril (ortholog) 5 134944726 134969017 + 22301074 116902188 MODEL JAAIVD010000023;XM_032904553 XP_032760444 myosin-7B protein-coding 625869604 Dhtkd1 dehydrogenase E1 and transketolase domain containing 1 ENCODES a protein that exhibits 2-oxoadipate dehydrogenase activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Charcot-Marie-Tooth disease axonal type 2Q (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN mitochondrion (ortholog); oxoadipate dehydrogenase complex (ortholog) 14 12212260 12260543 - 22301074;30032202 116883645 MODEL JAAIVD010000009;XM_032884835;XM_032884836;XM_032884837 XP_032740726;XP_032740727;XP_032740728 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial protein-coding 625869633 LOC116884065 uncharacterized LOC116884065 14 56545800 56559174 + 116884065 MODEL JAAIVD010000009;XR_004385814 ncrna 625869638 Camk2b calcium/calmodulin dependent protein kinase II beta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); phospholipase binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); calcium ion transport (ortholog); cell projection morphogenesis (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; p38 MAPK signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH Apnea (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 40 (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); cytosol (ortholog); dendrite (ortholog) 11 74919784 75007241 - 22301074;30032202 116912810 MODEL JAAIVD010000006;XM_032916973;XM_032916974;XM_032916975;XM_032916976;XM_032916977 XP_032772864;XP_032772865;XP_032772866;XP_032772867;XP_032772868 calcium/calmodulin-dependent protein kinase type II subunit beta protein-coding 625869675 LOC116900520 uncharacterized LOC116900520 5 82933051 82935840 + 116900520 MODEL JAAIVD010000023;XR_004387935 ncrna 625869679 LOC116887281 uncharacterized LOC116887281 18 23676492 23677928 + 116887281 MODEL JAAIVD010000013;XR_004386208 ncrna 625869683 Mtfmt mitochondrial methionyl-tRNA formyltransferase ENCODES a protein that exhibits methionyl-tRNA formyltransferase activity (ortholog); INVOLVED IN conversion of methionyl-tRNA to N-formyl-methionyl-tRNA (ortholog); PARTICIPATES IN folate metabolic pathway; glycine N-methyltransferase deficiency pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 15 (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 8 59742089 59760536 + 22301074;30032202 116907306 MODEL JAAIVD010000027;XM_032910251 XP_032766142 methionyl-tRNA formyltransferase, mitochondrial protein-coding 625869696 LOC116903150 single-pass membrane and coiled-coil domain-containing protein 3-like 6 12631645 12635217 + 116903150 MODEL JAAIVD010000024 pseudo 625869697 R3hdml R3H domain containing like 5 154460839 154471741 - 30032202 116902379 MODEL JAAIVD010000023;XM_032904891 XP_032760782 peptidase inhibitor R3HDML protein-coding 625869705 Wipf1 WAS/WASL interacting protein family member 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); protein folding chaperone (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); positive regulation of protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog) 5 50781010 50821309 - 22301074 116900837 MODEL JAAIVD010000023;XM_032902537 XP_032758428 WAS/WASL-interacting protein family member 1 protein-coding 625869716 Ralgapa1 Ral GTPase activating protein catalytic subunit alpha 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); long QT syndrome (ortholog); Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 68844343 69200969 - 22301074;30032202 116905062 MODEL JAAIVD010000026;XM_032907755;XM_032907757;XM_032907758;XM_032907759;XM_032907760;XM_032907761;XM_032907762;XM_032907763;XM_032907764;XM_032907765;XR_004388482 XP_032763646;XP_032763648;XP_032763649;XP_032763650;XP_032763651;XP_032763652;XP_032763653;XP_032763654;XP_032763655;XP_032763656 ral GTPase-activating protein subunit alpha-1 protein-coding 625869781 Naa10 N-alpha-acetyltransferase 10, NatA catalytic subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN N-terminal protein amino acid acetylation (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, centromeric (ortholog); protein acetylation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant intellectual developmental disorder (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) X 128661296 128666778 + 30032202 116888665 MODEL JAAIVD010000014;XM_032889960 XP_032745851 N-alpha-acetyltransferase 10 protein-coding 625869793 Ccdc51 coiled-coil domain containing 51 ENCODES a protein that exhibits mitochondrial ATP-gated potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 100342315 100361152 + 116907638 MODEL JAAIVD010000027;XM_032910701;XM_032910702;XM_032910703 XP_032766592;XP_032766593;XP_032766594 mitochondrial potassium channel protein-coding 625869807 LOC116912546 uncharacterized LOC116912546 11 21942561 21944557 - 116912546 MODEL JAAIVD010000006;XR_004389467 ncrna 625869812 Fkbp2 FKBP prolyl isomerase 2 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog) 2 815536 818208 + 22301074;30032202 116894812 MODEL JAAIVD010000001;XM_032896477;XM_032896478;XM_032896479;XM_032896480 XP_032752368;XP_032752369;XP_032752370;XP_032752371 peptidyl-prolyl cis-trans isomerase FKBP2 protein-coding 625869829 Mtif3 mitochondrial translational initiation factor 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation factor activity, RNA binding (ortholog); INVOLVED IN ribosome disassembly (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) 16 6919452 6924614 + 22301074;30032202 116885344 MODEL JAAIVD010000004;XM_032886618;XM_032886619 XP_032742509;XP_032742510 translation initiation factor IF-3, mitochondrial protein-coding 625869839 LOC116906512 small nucleolar RNA U3 7 75313427 75313519 + 116906512 MODEL JAAIVD010000026 pseudo 625869840 Mgat3 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); cellular response to oxidative stress (ortholog); cognition (ortholog); PARTICIPATES IN E-cadherin signaling pathway 1 249942187 249984117 + 22301074;30032202 116913713 MODEL JAAIVD010000025;XM_032918012;XM_032918021;XM_032918030;XM_032918037;XM_032918042;XM_032918050 XP_032773903;XP_032773912;XP_032773921;XP_032773928;XP_032773933;XP_032773941 protein-coding 625869860 LOC116908192 ubiquitin-conjugating enzyme E2 L3-like 8 57065388 57065898 - 116908192 MODEL JAAIVD010000027 pseudo 625869861 Wars1 tryptophanyl-tRNA synthetase 1 ENCODES a protein that exhibits kinase inhibitor activity (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of gene expression (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 9 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 7 126544488 126575042 - 22301074;30032202 116905458 MODEL JAAIVD010000026;XM_032908415 XP_032764306 tryptophan--tRNA ligase, cytoplasmic protein-coding 625869876 E2f2 E2F transcription factor 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); lens fiber cell apoptotic process (ortholog); negative regulation of sprouting angiogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 1 22047080 22066935 - 22301074;30032202 116894422 MODEL JAAIVD010000025;XM_032896130 XP_032752021 transcription factor E2F2 protein-coding 625869888 Selenof selenoprotein F ENCODES a protein that exhibits selenium binding (ortholog); thioredoxin peroxidase activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); sperm DNA condensation (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 3 16115481 16147092 - 30032202 116896188 MODEL JAAIVD010000012;XM_032897233 XP_032753124 protein-coding 625869897 LOC116905656 60 kDa heat shock protein, mitochondrial-like 7 16471827 16473510 - 116905656 MODEL JAAIVD010000026 pseudo 625869898 LOC116915154 U4 spliceosomal RNA 13 63069121 63069253 - 116915154 MODEL JAAIVD010000008 pseudo 625869899 Col9a1 collagen type IX alpha 1 chain ENCODES a protein that exhibits carbohydrate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); dilated cardiomyopathy (ortholog); fundus dystrophy (ortholog); FOUND IN collagen type IX trimer (ortholog) 4 101513526 101602414 + 116898460 MODEL JAAIVD010000003;XM_032899717 XP_032755608 collagen alpha-1(IX) chain protein-coding 625869940 LOC116885101 small nucleolar RNA SNORA74 15 8811349 8811545 - 116885101 MODEL JAAIVD010000010;XR_004385967 snorna 625869943 Kctd5 potassium channel tetramerization domain containing 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); FOUND IN cytosol (ortholog) 9 1342340 1370062 - 22301074;30032202 116909180 MODEL JAAIVD010000002;XM_032912672 XP_032768563 BTB/POZ domain-containing protein KCTD5 protein-coding 625869953 Lrrc39 leucine rich repeat containing 39 3 43138713 43157073 - 22301074 116896328 MODEL JAAIVD010000012;XM_032897424;XM_032897425 XP_032753315;XP_032753316 leucine-rich repeat-containing protein 39 protein-coding 625869971 Htra1 HtrA serine peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function activator activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of defense response to virus (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); age related macular degeneration 7 (ortholog); CADASIL (ortholog); FOUND IN extracellular matrix (ortholog); plasma membrane (ortholog) 2 71102434 71151993 - 22301074;30032202 116891416 MODEL JAAIVD010000001;XM_032892442 XP_032748333 serine protease HTRA1 protein-coding 625869984 LOC116903922 60S ribosomal protein L26-like 6 100177706 100178146 - 116903922 MODEL JAAIVD010000024 pseudo 625869985 Usp44 ubiquitin specific peptidase 44 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); chromosome segregation (ortholog); negative regulation of mitotic metaphase/anaphase transition (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; FOUND IN nucleus (ortholog) 1 172926528 172940524 + 22301074;30032202 116889985 MODEL JAAIVD010000025;XM_032890776 XP_032746667 ubiquitin carboxyl-terminal hydrolase 44 protein-coding 625869994 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92911344 92911415 - 116904857 MODEL JAAIVD010000024 trna 625869995 Myo3a myosin IIIA ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cochlea morphogenesis (ortholog); inner ear development (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 30 (ortholog); autosomal dominant nonsyndromic deafness 90 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN cytoplasm (ortholog); filamentous actin (ortholog); filopodium (ortholog) 14 1939394 2125796 - 22301074 116883479 MODEL JAAIVD010000009;XM_032884634 XP_032740525 myosin-IIIa protein-coding 625870031 LOC116891423 glyceraldehyde-3-phosphate dehydrogenase-like 2 71635085 71636084 - 116891423 MODEL JAAIVD010000001 pseudo 625870032 Tmem132b transmembrane protein 132B ASSOCIATED WITH melanoma (ortholog) 16 28116286 28378429 - 116885787 MODEL JAAIVD010000004;XM_032887118;XM_032887119;XM_032887120 XP_032743009;XP_032743010;XP_032743011 protein-coding 625870051 Paqr7 progestin and adipoQ receptor family member 7 1 23744526 23755774 - 30032202 116894737 MODEL JAAIVD010000025;XM_032896420;XM_032896423 XP_032752311;XP_032752314 membrane progestin receptor alpha protein-coding 625870060 Cyth2 cytohesin 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN negative regulation of dendrite development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); extrinsic component of postsynaptic specialization membrane (ortholog) 2 153701849 153708705 + 22301074 116892124 MODEL JAAIVD010000001;XM_032893607 XP_032749498 cytohesin-2 protein-coding 625870076 LOC116914912 60S ribosomal protein L10-like 13 20641831 20642813 - 116914912 MODEL JAAIVD010000008 pseudo 625870077 Ppp6r1 protein phosphatase 6 regulatory subunit 1 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); small GTPase binding (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) 2 177209741 177235439 - 22301074;30032202 116892658 MODEL JAAIVD010000001;XM_032894481 XP_032750372 serine/threonine-protein phosphatase 6 regulatory subunit 1 protein-coding 625870105 LOC116886597 protein HEXIM2-like 17 8116623 8144778 - 116886597 MODEL JAAIVD010000011 pseudo 625870106 Fhip2a FHF complex subunit HOOK interacting protein 2A ASSOCIATED WITH melanoma (ortholog); syndromic intellectual disability (ortholog) 2 58770294 58795740 - 116891325 MODEL JAAIVD010000001;XM_032892249 XP_032748140 Fam160b1 family with sequence similarity 160 member B1;protein FAM160B1 protein-coding 625870127 LOC116907732 olfactory receptor 145-like 8 82857771 82858718 - 22301074;30032202 116907732 MODEL JAAIVD010000027;XM_032910859 XP_032766750 protein-coding 625870130 LOC116887154 uncharacterized LOC116887154 18 6779694 6786356 - 116887154 MODEL JAAIVD010000013;XR_004386201 ncrna 625870134 LOC116898368 poly(rC)-binding protein 2-like 4 61959371 61968153 - 30032202 116898368 MODEL JAAIVD010000003;XM_032899680 XP_032755571 protein-coding 625870138 LOC116887455 60S ribosomal protein L6-like 1 221290754 221291421 + 116887455 MODEL JAAIVD010000025 pseudo 625870139 LOC116897381 U4 spliceosomal RNA 3 28977331 28977461 + 116897381 MODEL JAAIVD010000012 pseudo 625870140 Frs2 fibroblast growth factor receptor substrate 2 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); neurotrophin TRKA receptor binding (ortholog); transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 195229589 195242763 - 30032202 116909232 MODEL JAAIVD010000025;XM_032912738 XP_032768629 protein-coding 625870150 LOC116889308 uncharacterized LOC116889308 X 57222157 57241609 - 116889308 MODEL JAAIVD010000014;XR_004386374;XR_004386375 ncrna 625870158 Fbxo40 F-box protein 40 INVOLVED IN muscle cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog) 4 21836453 21843697 - 22301074;30032202 116897972 MODEL JAAIVD010000003;XM_032899373 XP_032755264 F-box only protein 40 protein-coding 625870163 Ccr10 C-C motif chemokine receptor 10 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH status epilepticus (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) 9 60471478 60472882 - 22301074;30032202 116910522 MODEL JAAIVD010000002;XM_032914426 XP_032770317 C-C chemokine receptor type 10 protein-coding 625870168 LOC116887224 D-dopachrome decarboxylase 18 11666304 11668655 + 30032202 116887224 MODEL JAAIVD010000013;XM_032888787 XP_032744678 protein-coding 625870175 LOC116888920 transcription factor Sp3-like X 56637959 56642241 - 116888920 MODEL JAAIVD010000014 pseudo 625870176 LOC116906433 small nucleolar RNA SNORA48 7 79045186 79045321 + 116906433 MODEL JAAIVD010000026 pseudo 625870177 LOC116906496 U2 spliceosomal RNA 7 72334567 72334757 + 116906496 MODEL JAAIVD010000026;XR_004388737 snrna 625870180 LOC116903045 uncharacterized LOC116903045 6 55115890 55116517 - 116903045 MODEL JAAIVD010000024;XR_004388248 ncrna 625870184 LOC116914633 activated RNA polymerase II transcriptional coactivator p15-like 13 64146394 64146784 + 116914633 MODEL JAAIVD010000008 pseudo 625870185 LOC116890359 U6 spliceosomal RNA 1 181869062 181869166 - 116890359 MODEL JAAIVD010000025;XR_004386577 snrna 625870188 LOC116892112 nodal modulator 1 2 153437526 153488707 - 22301074;30032202 116892112 MODEL JAAIVD010000001;XM_032893591 XP_032749482 protein-coding 625870223 LOC116913246 ankyrin repeat domain-containing protein 26-like 12 78151603 78161186 - 116913246 MODEL JAAIVD010000007;XM_032917406 XP_032773297 protein-coding 625870229 Slc35a5 solute carrier family 35 member A5 ENCODES a protein that exhibits pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN Golgi membrane (ortholog) 4 29901173 29921876 - 22301074;30032202 116898870 MODEL JAAIVD010000003;XM_032900238;XM_032900239 XP_032756129;XP_032756130 probable UDP-sugar transporter protein SLC35A5 protein-coding 625870242 LOC116892646 uncharacterized LOC116892646 2 176578939 176628751 - 116892646 MODEL JAAIVD010000001;XR_004386960 ncrna 625870246 LOC116884758 protocadherin-3-like 15 1042487 1045616 + 22301074 116884758 MODEL JAAIVD010000010;XM_032885976 XP_032741867 protein-coding 625870251 Leprotl1 leptin receptor overlapping transcript like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 13 52881338 52892154 + 30032202 116914740 MODEL JAAIVD010000008;XM_032919177 XP_032775068 leptin receptor overlapping transcript-like 1 protein-coding 625870259 Map3k8 mitogen-activated protein kinase kinase kinase 8 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); gap junction-mediated intercellular transport (ortholog); MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH background diabetic retinopathy (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 30708501 30728765 - 22301074 116883957 MODEL JAAIVD010000009;XM_032885201 XP_032741092 protein-coding 625870271 LOC116894900 U6 spliceosomal RNA 2 177314022 177314080 + 116894900 MODEL JAAIVD010000001 pseudo 625870272 LOC116884505 elongation factor 1-alpha 1-like 15 65227726 65229490 - 116884505 MODEL JAAIVD010000010;XR_004385873 pseudo 625870275 Dnaaf4 dynein axonemal assembly factor 4 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH dyslexia (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 67298969 67312484 + 22301074;30032202 116907019 MODEL JAAIVD010000027;XM_032909957;XM_032909958;XM_032909959 XP_032765848;XP_032765849;XP_032765850 dynein assembly factor 4, axonemal protein-coding 625870298 C1H8orf89 chromosome 1 C8orf89 homolog 1 150423879 150444410 - 116889827 MODEL JAAIVD010000025;XM_032890666 XP_032746557 putative uncharacterized protein C8orf89 homolog protein-coding 625870307 LOC116902890 60S ribosomal protein L23-like 6 101279144 101279567 - 116902890 MODEL JAAIVD010000024 pseudo 625870308 Iqsec2 IQ motif and Sec7 domain ArfGEF 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of long-term synaptic depression (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Atkin Syndrome (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor ribbon synapse (ortholog); postsynaptic density membrane (ortholog) X 13293411 13375249 + 22301074;30032202 116889312 MODEL JAAIVD010000014;XM_032890431;XM_032890432;XM_032890433;XM_032890434 XP_032746322;XP_032746323;XP_032746324;XP_032746325 IQ motif and SEC7 domain-containing protein 2 protein-coding 625870338 Mid1 midline 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); positive regulation of stress-activated MAPK cascade (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytoplasmic microtubule (ortholog) X 26665848 26753944 - 22301074 116889080 MODEL JAAIVD010000014;XM_032890258 XP_032746149 E3 ubiquitin-protein ligase Midline-1 protein-coding 625870350 LOC116884852 uncharacterized LOC116884852 15 30742464 30749447 - 116884852 MODEL JAAIVD010000010;XR_004385903 ncrna 625870355 LOC116885733 paired immunoglobulin-like type 2 receptor beta-2 16 15912354 15915549 - 30032202 116885733 MODEL JAAIVD010000004;XM_032887043 XP_032742934 protein-coding 625870362 LOC116912011 40S ribosomal protein S6-like 11 58119901 58120599 + 116912011 MODEL JAAIVD010000006 pseudo 625870363 Ror1 receptor tyrosine kinase like orphan receptor 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); cell population proliferation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 108 (ortholog); Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN axon terminus (ortholog); cell surface (ortholog); plasma membrane (ortholog) 1 54121691 54475210 - 22301074;30032202 116899777 MODEL JAAIVD010000025;XM_032901776 XP_032757667 inactive tyrosine-protein kinase transmembrane receptor ROR1 protein-coding 625870376 LOC116887340 olfactory receptor 14J1-like 18 10742263 10743234 + 22301074 116887340 MODEL JAAIVD010000013;XM_032888933 XP_032744824 protein-coding 625870379 LOC116884476 L-lactate dehydrogenase A chain-like 1 209830050 209830661 + 116884476 MODEL JAAIVD010000025 pseudo 625870380 LOC116884127 U6 spliceosomal RNA 14 42219648 42219742 + 116884127 MODEL JAAIVD010000009 pseudo 625870381 Aprt adenine phosphoribosyltransferase ENCODES a protein that exhibits adenine binding (ortholog); adenine phosphoribosyltransferase activity (ortholog); AMP binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); Breast Neoplasms (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 42203352 42205626 - 22301074;30032202 116886123 MODEL JAAIVD010000011;XM_032887463 XP_032743354 protein-coding 625870390 Atxn7l3b ataxin 7 like 3B INVOLVED IN regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog) 1 190981606 190985150 - 30032202 116908985 MODEL JAAIVD010000025;XM_032912459 XP_032768350 ataxin-7-like protein 3B protein-coding 625870395 LOC116888870 immunoglobulin superfamily member 1-like X 113047083 113052115 + 116888870 MODEL JAAIVD010000014;XM_032890131;XM_032890132;XM_032890133 XP_032746022;XP_032746023;XP_032746024 protein-coding 625870412 C14H7orf25 chromosome 14 C7orf25 homolog 14 33504661 33506596 + 116883727 MODEL JAAIVD010000009;XM_032884960 XP_032740851 UPF0415 protein C7orf25 homolog protein-coding 625870417 Ncan neurocan INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of postsynapse organization (ortholog); regulation of synapse structural plasticity (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); dyslexia (ortholog); urinary bladder cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); perineuronal net (ortholog) 13 12363847 12388206 - 22301074 116914398 MODEL JAAIVD010000008;XM_032918625 XP_032774516 neurocan core protein protein-coding 625870436 LOC116914374 uncharacterized LOC116914374 13 20356489 20364267 + 116914374 MODEL JAAIVD010000008;XR_004389744;XR_004389745 ncrna 625870443 Rxfp2 relaxin family peptide receptor 2 ENCODES a protein that exhibits peptide hormone binding (ortholog); protein-hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); male gonad development (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); disorder of sexual development (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN plasma membrane (ortholog) 16 3768171 3830493 - 22301074 116885365 MODEL JAAIVD010000004;XM_032886638 XP_032742529 relaxin receptor 2 protein-coding 625870465 Qki QKI, KH domain containing RNA binding ENCODES a protein that exhibits internal N(7)-methylguanine-containing RNA reader activity (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); axon ensheathment (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 2 189028049 189136838 - 30032202 116892816 MODEL JAAIVD010000001;XM_032894696;XM_032894697;XM_032894698;XM_032894699;XM_032894700;XM_032894701 XP_032750587;XP_032750588;XP_032750589;XP_032750590;XP_032750591;XP_032750592 protein quaking protein-coding 625870494 C4H2orf72 chromosome 4 C2orf72 homolog 4 158184436 158192683 + 116899585 MODEL JAAIVD010000003;XM_032901524;XM_032901525 XP_032757415;XP_032757416 uncharacterized protein C2orf72 homolog protein-coding 625870503 LOC116908263 uncharacterized LOC116908263 8 100643809 100648938 + 30032202 116908263 MODEL JAAIVD010000027;XM_032911513 XP_032767404 uncharacterized protein LOC116908263 protein-coding 625870508 LOC116884442 40S ribosomal protein S13-like 1 269487230 269487643 - 116884442 MODEL JAAIVD010000025 pseudo 625870509 Sez6l2 seizure related 6 homolog like 2 INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN endoplasmic reticulum (ortholog); neuronal cell body (ortholog) 2 74923385 74943349 - 30032202 116891495 MODEL JAAIVD010000001;XM_032892603;XM_032892604 XP_032748494;XP_032748495 seizure 6-like protein 2 protein-coding 625870534 LOC116914188 U6 spliceosomal RNA 12 90509762 90509866 + 116914188 MODEL JAAIVD010000007;XR_004389727 snrna 625870537 LOC116887552 40S ribosomal protein S12-like 18 3175847 3176229 + 116887552 MODEL JAAIVD010000013 pseudo 625870538 LOC116889688 inosine-5'-monophosphate dehydrogenase-like 30032202 116889688 MODEL JAAIVD010000052;XM_032890574 XP_032746465 protein-coding 625870539 LOC116904347 glyceraldehyde-3-phosphate dehydrogenase-like 6 72634224 72666145 - 22301074;30032202 116904347 MODEL JAAIVD010000024;XM_032907241 XP_032763132 protein-coding 625870543 Trim28 tripartite motif containing 28 ENCODES a protein that exhibits chromatin binding (ortholog); chromo shadow domain binding (ortholog); DNA binding (ortholog); INVOLVED IN convergent extension involved in axis elongation (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); DNA repair (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); nephroblastoma (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 2 174155178 174161797 - 22301074 116892634 MODEL JAAIVD010000001;XM_032894454 XP_032750345 transcription intermediary factor 1-beta protein-coding 625870564 Poll DNA polymerase lambda ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); DNA biosynthetic process (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog) 2 45033587 45041951 - 22301074;30032202 116891227 MODEL JAAIVD010000001;XM_032892071;XM_032892073;XM_032892074 XP_032747962;XP_032747964;XP_032747965 protein-coding 625870582 Hecw1 HECT, C2 and WW domain containing E3 ubiquitin protein ligase 1 14 32957085 33324139 - 22301074;30032202 116883328 MODEL JAAIVD010000009;XM_032884396;XM_032884397;XM_032884399 XP_032740287;XP_032740288;XP_032740290 E3 ubiquitin-protein ligase HECW1 protein-coding 625870619 Tnp2 transition protein 2 ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleosome (ortholog); nucleus (ortholog) 9 11566920 11567643 + 22301074;30032202 116909583 MODEL JAAIVD010000002;XM_032913204 XP_032769095 nuclear transition protein 2 protein-coding 625870625 LOC116900289 olfactory receptor 8K3-like 5 63599007 63599945 - 22301074;30032202 116900289 MODEL JAAIVD010000023;XM_032902044 XP_032757935 protein-coding 625870628 LOC116900176 olfactory receptor 1B1 5 14764053 14765006 - 22301074;30032202 116900176 MODEL JAAIVD010000023;XM_032901932 XP_032757823 protein-coding 625870631 LOC116896150 60S ribosomal protein L9-like 3 9129793 9130370 - 116896150 MODEL JAAIVD010000012 pseudo 625870632 Gpn1 GPN-loop GTPase 1 ASSOCIATED WITH Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 22656158 22673997 - 22301074;30032202 116905968 MODEL JAAIVD010000026;XM_032908973 XP_032764864 protein-coding 625870650 LOC116886647 40S ribosomal protein S25-like 17 21933923 21934561 + 116886647 MODEL JAAIVD010000011 pseudo 625870651 LOC116914063 eukaryotic translation initiation factor 3 subunit K-like 12 22211503 22212126 + 116914063 MODEL JAAIVD010000007 pseudo 625870652 LOC116913354 cysteine and histidine-rich protein 1-like 1 248985621 248987473 - 116913354 MODEL JAAIVD010000025;XM_032917511 XP_032773402 protein-coding 625870659 LOC116908122 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 8 115187018 115187410 + 116908122 MODEL JAAIVD010000027 pseudo 625870660 Kctd16 potassium channel tetramerization domain containing 16 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN behavioral fear response (ortholog); memory (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN postsynaptic membrane (ortholog); presynaptic membrane (ortholog); receptor complex (ortholog) 15 4446309 4703033 - 22301074;30032202 116884958 MODEL JAAIVD010000010;XM_032886158;XM_032886159;XM_032886160;XM_032886161 XP_032742049;XP_032742050;XP_032742051;XP_032742052 BTB/POZ domain-containing protein KCTD16 protein-coding 625870676 Kif13b kinesin family member 13B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of axonogenesis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 59597697 59750703 - 22301074;30032202 116913850 MODEL JAAIVD010000007;XM_032918154 XP_032774045 kinesin-like protein KIF13B protein-coding 625870720 Herpud2 HERPUD family member 2 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog) 8 21043542 21082167 - 22301074;30032202 116906696 MODEL JAAIVD010000027;XM_032909486 XP_032765377 homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein protein-coding 625870732 Nckap5l NCK associated protein 5 like INVOLVED IN microtubule bundle formation (ortholog); microtubule depolymerization (ortholog); FOUND IN centrosome (ortholog); microtubule plus-end (ortholog) 1 272223446 272248427 - 30032202 116885147 MODEL JAAIVD010000025;XM_032886356;XR_004385982 XP_032742247 nck-associated protein 5-like protein-coding 625870752 Rpl7l1 ribosomal protein L7 like 1 INVOLVED IN blastocyst formation (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 4 83083862 83090763 + 22301074;30032202 116898404 MODEL JAAIVD010000003;XM_032899692 XP_032755583 60S ribosomal protein L7-like 1 protein-coding 625870762 LOC116909425 olfactory receptor 10-like 9 32005099 32006034 + 22301074 116909425 MODEL JAAIVD010000002;XM_032912999 XP_032768890 protein-coding 625870765 LOC116900871 olfactory receptor 10AG1-like 5 68896372 68897316 + 22301074 116900871 MODEL JAAIVD010000023;XM_032902553 XP_032758444 protein-coding 625870769 LOC116899199 long-chain-fatty-acid--CoA ligase ACSBG2-like 4 88240434 88268285 + 30032202 116899199 MODEL JAAIVD010000003;XM_032900784 XP_032756675 protein-coding 625870788 Spef2 sperm flagellar 2 INVOLVED IN brain morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); schizophrenia (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 170952825 171129875 + 22301074;30032202 116897130 MODEL JAAIVD010000012;XM_032898791;XM_032898792 XP_032754682;XP_032754683 sperm flagellar protein 2 protein-coding 625870834 LOC116899986 60S ribosomal protein L7a-like 1 55415995 55416799 - 116899986 MODEL JAAIVD010000025 pseudo 625870835 LOC116884813 snRNA-activating protein complex subunit 5-like 15 43522909 43523187 - 116884813 MODEL JAAIVD010000010 pseudo 625870836 LOC116911274 cytochrome c oxidase subunit 7C, mitochondrial-like 10 40451095 40451334 - 22301074;30032202 116911274 MODEL JAAIVD010000005;XM_032915179 XP_032771070 protein-coding 625870840 Dyrk3 dual specificity tyrosine phosphorylation regulated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 10 4666789 4677231 + 22301074;30032202 116911533 MODEL JAAIVD010000005;XM_032915522;XM_032915523;XM_032915524 XP_032771413;XP_032771414;XP_032771415 dual specificity tyrosine-phosphorylation-regulated kinase 3 protein-coding 625870853 LOC116899922 U1 spliceosomal RNA 4 138867710 138867865 - 116899922 MODEL JAAIVD010000003;XR_004387893 snrna 625870856 Etfa electron transfer flavoprotein subunit alpha ENCODES a protein that exhibits electron transfer activity (ortholog); flavin adenine dinucleotide binding (ortholog); oxidoreductase activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glutaric acidemia type 3 (ortholog); Glutaric Aciduria 2 (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrion (ortholog) 8 49515191 49578260 - 22301074;30032202 116906630 MODEL JAAIVD010000027;XM_032909388 XP_032765279 electron transfer flavoprotein subunit alpha, mitochondrial protein-coding 625870872 LOC116915063 SIN3-HDAC complex-associated factor-like 13 18680038 18680812 - 30032202 116915063 MODEL JAAIVD010000008;XM_032919481 XP_032775372 protein-coding 625870876 LOC116893857 olfactory receptor 13A1-like 2 61482212 61483141 - 22301074 116893857 MODEL JAAIVD010000001;XM_032895577 XP_032751468 protein-coding 625870879 Marcol MARCO like 3 274485 278495 + 116895194 MODEL JAAIVD010000012;XM_032896535 XP_032752426 MARCO-like protein protein-coding 625870885 Maged1 MAGE family member D1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of epithelial cell proliferation (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); protein-containing complex (ortholog) X 88967130 88973830 + 30032202 116888517 MODEL JAAIVD010000014;XM_032889816 XP_032745707 melanoma-associated antigen D1 protein-coding 625870902 Agrp agouti related neuropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); circadian rhythm (ortholog); eating behavior (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH Hyperphagia (ortholog); obesity (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN extracellular space (ortholog); Golgi lumen (ortholog); neuronal cell body (ortholog) 17 25297685 25370111 - 22301074;30032202 116886445 MODEL JAAIVD010000011;XM_032887943;XM_032887944;XM_032887945 XP_032743834;XP_032743835;XP_032743836 agouti-related protein protein-coding 625870918 LOC116903022 protein transport protein Sec61 subunit gamma-like 6 154743905 154744135 + 116903022 MODEL JAAIVD010000024 pseudo 625870919 Vgll1 vestigial like family member 1 FOUND IN nucleoplasm (ortholog) X 117511951 117527830 + 22301074;30032202 116888175 MODEL JAAIVD010000014;XM_032889496 XP_032745387 transcription cofactor vestigial-like protein 1 protein-coding 625870923 LOC116886540 uncharacterized LOC116886540 17 28977446 28979418 + 116886540 MODEL JAAIVD010000011;XR_004386110 ncrna 625870928 Mrps33 mitochondrial ribosomal protein S33 ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN mitochondrion (ortholog) 6 99975644 99984384 + 30032202 116903921 MODEL JAAIVD010000024;XM_032906692 XP_032762583 28S ribosomal protein S33, mitochondrial protein-coding 625870935 Fscn1 fascin actin-bundling protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cell migration (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Bile Duct Neoplasms (ortholog); cholangiocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell projection membrane (ortholog); cell-cell junction (ortholog) 16 10172024 10184796 - 22301074;30032202 116885505 MODEL JAAIVD010000004;XM_032886797 XP_032742688 fascin protein-coding 625870944 Nin ninein ENCODES a protein that exhibits microtubule minus-end binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome localization (ortholog); centrosome-templated microtubule nucleation (ortholog); ASSOCIATED WITH Seckel syndrome (ortholog); Seckel syndrome 7 (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); axonal growth cone (ortholog) 7 83699489 83800596 - 22301074;30032202 116905130 MODEL JAAIVD010000026;XM_032907873;XM_032907874;XM_032907875;XM_032907876;XM_032907878;XM_032907879;XM_032907880;XM_032907881 XP_032763764;XP_032763765;XP_032763766;XP_032763767;XP_032763769;XP_032763770;XP_032763771;XP_032763772 protein-coding 625870997 LOC116913070 transaldolase-like 1 176003483 176004466 - 116913070 MODEL JAAIVD010000025 pseudo 625870998 Vps13b vacuolar protein sorting 13 homolog B ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN acrosome assembly (ortholog); adipose tissue development (ortholog); brain development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cataract (ortholog); Cohen syndrome (ortholog); FOUND IN acrosomal membrane (ortholog); cis-Golgi network membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 1 208955272 209499265 + 116910526 MODEL JAAIVD010000025;XM_032914433;XM_032914442 XP_032770324;XP_032770333 vacuolar protein sorting-associated protein 13B protein-coding 625871068 Septin3 septin 3 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN protein catabolic process at presynapse (ortholog); FOUND IN presynapse (ortholog); presynaptic membrane (ortholog); septin complex (ortholog) 1 251998924 252022724 + 22301074;30032202 116914244 MODEL JAAIVD010000025;XM_032918456;XM_032918461;XM_032918468 XP_032774347;XP_032774352;XP_032774359 neuronal-specific septin-3 protein-coding 625871088 Hormad2 HORMA domain containing 2 INVOLVED IN meiotic cell cycle (ortholog); meiotic sister chromatid cohesion (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); cytosol (ortholog) 11 73326327 73411887 - 116912728 MODEL JAAIVD010000006;XM_032916861;XM_032916862;XM_032916863 XP_032772752;XP_032772753;XP_032772754 HORMA domain-containing protein 2 protein-coding 625871108 LOC116888822 dnaJ homolog subfamily A member 1-like X 11835554 11836976 + 116888822 MODEL JAAIVD010000014 pseudo 625871109 Acot11 acyl-CoA thioesterase 11 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); response to cold (ortholog); response to temperature stimulus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 1 48040256 48063682 + 22301074;30032202 116890869 MODEL JAAIVD010000025;XM_032891492 XP_032747383 acyl-coenzyme A thioesterase 11 protein-coding 625871128 Bhlha15 basic helix-loop-helix family member a15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell differentiation (ortholog); cell-cell adhesion mediated by cadherin (ortholog); FOUND IN nucleus (ortholog) 16 8996946 9001101 - 22301074 116885243 MODEL JAAIVD010000004;XM_032886481 XP_032742372 class A basic helix-loop-helix protein 15 protein-coding 625871134 Rundc3a RUN domain containing 3A INVOLVED IN positive regulation of cGMP-mediated signaling (ortholog) 9 61690896 61700019 + 30032202 116908781 MODEL JAAIVD010000002;XM_032912153;XM_032912154;XM_032912155;XM_032912157;XM_032912158;XM_032912159;XM_032912160;XM_032912161;XM_032912162 XP_032768044;XP_032768045;XP_032768046;XP_032768048;XP_032768049;XP_032768050;XP_032768051;XP_032768052;XP_032768053 RUN domain-containing protein 3A protein-coding 625871163 Kif18a kinesin family member 18A ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); male meiotic nuclear division (ortholog); microtubule depolymerization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); kinetochore (ortholog) 5 87593678 87649835 + 22301074;30032202 116901724 MODEL JAAIVD010000023;XM_032903860 XP_032759751 kinesin-like protein KIF18A protein-coding 625871184 Proser1 proline and serine rich 1 3 100963681 100983325 - 116896878 MODEL JAAIVD010000012;XM_032898424 XP_032754315 proline and serine-rich protein 1 protein-coding 625871201 LOC116901346 tubulin polyglutamylase TTLL11-like 5 13672489 13720171 + 116901346 MODEL JAAIVD010000023;XM_032903182 XP_032759073 protein-coding 625871208 Prrt3 proline rich transmembrane protein 3 6 33032870 33041208 + 116903407 MODEL JAAIVD010000024;XM_032905921 XP_032761812 proline-rich transmembrane protein 3 protein-coding 625871216 LOC116898337 pyruvate kinase PKM-like 4 45657024 45658685 + 116898337 MODEL JAAIVD010000003 pseudo 625871217 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889712 MODEL JAAIVD010000059 trna 625871218 Rpl22l1 ribosomal protein L22 like 1 3 125868417 125873760 - 22301074;30032202 116895932 MODEL JAAIVD010000012;XM_032897002 XP_032752893 60S ribosomal protein L22-like 1 protein-coding 625871226 Rhoj ras homolog family member J ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 7 89480783 89565994 + 22301074;30032202 116905171 MODEL JAAIVD010000026;XM_032907945 XP_032763836 rho-related GTP-binding protein RhoJ protein-coding 625871235 LOC116883274 60S ribosomal protein L30-like 14 74741801 74742717 - 116883274 MODEL JAAIVD010000009 pseudo 625871236 Zscan18 zinc finger and SCAN domain containing 18 2 174426472 174441339 + 116892636 MODEL JAAIVD010000001;XM_032894456 XP_032750347 zinc finger and SCAN domain-containing protein 18 protein-coding 625871249 Galnt1 polypeptide N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); obsolete protein O-linked glycosylation via threonine (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH heart valve disease (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 15 19567927 19612786 - 30032202 116884992 MODEL JAAIVD010000010;XM_032886218 XP_032742109 protein-coding 625871265 Pole2 DNA polymerase epsilon 2, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN epsilon DNA polymerase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 7 82862022 82886596 - 22301074;30032202 116905115 MODEL JAAIVD010000026;XM_032907854 XP_032763745 DNA polymerase epsilon subunit 2 protein-coding 625871288 Atg13 autophagy related 13 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); mitophagy (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); prostate cancer (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) 5 65819514 65854600 - 22301074;30032202 116901627 MODEL JAAIVD010000023;XM_032903698;XM_032903699;XM_032903700;XM_032903701;XM_032903702;XM_032903703;XM_032903704 XP_032759589;XP_032759590;XP_032759591;XP_032759592;XP_032759593;XP_032759594;XP_032759595 autophagy-related protein 13 protein-coding 625871325 LOC116912013 ER lumen protein-retaining receptor 1-like 11 60598567 60599153 - 116912013 MODEL JAAIVD010000006 pseudo 625871326 LOC116905432 60S ribosomal protein L3-like 7 122301593 122302885 - 22301074;30032202 116905432 MODEL JAAIVD010000026;XM_032908378 XP_032764269 protein-coding 625871331 LOC116900345 olfactory receptor 10AG1-like 5 68955568 68956512 + 22301074 116900345 MODEL JAAIVD010000023;XM_032902099 XP_032757990 protein-coding 625871334 LOC116902219 heat shock cognate 71 kDa protein-like 5 136518830 136520934 - 116902219 MODEL JAAIVD010000023;XR_004388051 pseudo 625871337 Tfg trafficking from ER to golgi regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum exit site (ortholog) 4 40788027 40809959 - 30032202 116898905 MODEL JAAIVD010000003;XM_032900307;XM_032900308;XM_032900309;XM_032900310;XM_032900311 XP_032756198;XP_032756199;XP_032756200;XP_032756201;XP_032756202 protein TFG protein-coding 625871359 LOC116907074 uncharacterized LOC116907074 8 88151286 88159504 + 116907074 MODEL JAAIVD010000027;XR_004388803 ncrna 625871363 Nfkbiz NFKB inhibitor zeta ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell proliferation (ortholog); B cell receptor apoptotic signaling pathway (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog); nucleus (ortholog) 4 39914855 39925700 - 22301074;30032202 116898893 MODEL JAAIVD010000003;XM_032900291 XP_032756182 NF-kappa-B inhibitor zeta protein-coding 625871379 LOC116887446 rano class II histocompatibility antigen, B alpha chain 18 7934227 7938569 + 22301074;30032202 116887446 MODEL JAAIVD010000013;XM_032889056 XP_032744947 protein-coding 625871387 Olfm3 olfactomedin 3 INVOLVED IN eye photoreceptor cell development (ortholog); ASSOCIATED WITH strabismus (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 3 44553579 44593840 - 30032202 116896342 MODEL JAAIVD010000012;XM_032897444 XP_032753335 noelin-3 protein-coding 625871397 Rab22a RAB22A, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endocytosis (ortholog); endosome organization (ortholog); regulation of vesicle size (ortholog); FOUND IN actin cytoskeleton (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) 5 144275351 144315966 - 22301074 116902273 MODEL JAAIVD010000023;XM_032904706 XP_032760597 ras-related protein Rab-22A protein-coding 625871408 Cfap161 cilia and flagella associated protein 161 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 2 116543573 116568505 + 30032202 116894262 MODEL JAAIVD010000001;XM_032895967 XP_032751858 cilia- and flagella-associated protein 161 protein-coding 625871419 Glt8d2 glycosyltransferase 8 domain containing 2 ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) 1 165763454 165785096 + 22301074;30032202 116907653 MODEL JAAIVD010000025;XM_032910747 XP_032766638 glycosyltransferase 8 domain-containing protein 2 protein-coding 625871432 Neil2 nei like DNA glycosylase 2 ENCODES a protein that exhibits microtubule binding (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); mitotic spindle (ortholog) 12 61186770 61194813 + 22301074;30032202 116913457 MODEL JAAIVD010000007;XM_032917659 XP_032773550 endonuclease 8-like 2 protein-coding 625871440 Mff mitochondrial fission factor ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mitochondrial fission (ortholog); mitochondrion organization (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH encephalopathy due to defective mitochondrial and peroxisomal fission 2 (ortholog); genetic disease (ortholog); mitochondrial encephalomyopathy (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 4 155581225 155609464 + 30032202 116899565 MODEL JAAIVD010000003;XM_032901462;XM_032901463;XM_032901464;XM_032901465;XM_032901466;XM_032901467;XM_032901468;XM_032901469;XM_032901470;XM_032901471;XM_032901472;XM_032901474;XM_032901475;XM_032901476 XP_032757353;XP_032757354;XP_032757355;XP_032757356;XP_032757357;XP_032757358;XP_032757359;XP_032757360;XP_032757361;XP_032757362;XP_032757363;XP_032757365;XP_032757366;XP_032757367 protein-coding 625871474 LOC116896040 spliceosome-associated protein CWC27 homolog 3 192623925 192732702 + 116896040 MODEL JAAIVD010000012;XM_032897041 XP_032752932 protein-coding 625871482 LOC116898569 UDP-glucuronosyltransferase 1-9-like 4 160140961 160144846 + 22301074 116898569 MODEL JAAIVD010000003;XM_032899776 XP_032755667 protein-coding 625871486 C1H1orf174 chromosome 1 C1orf174 homolog FOUND IN nucleoplasm (ortholog) 1 6757911 6762527 - 116892184 MODEL JAAIVD010000025;XM_032893709 XP_032749600 UPF0688 protein C1orf174 homolog protein-coding 625871494 LOC116888951 ADP-ribosylation factor-like protein 2-binding protein X 4296758 4297247 - 116888951 MODEL JAAIVD010000014 pseudo 625871495 Uros uroporphyrinogen III synthase ENCODES a protein that exhibits folic acid binding (ortholog); uroporphyrinogen-III synthase activity (ortholog); INVOLVED IN cellular response to amine stimulus (ortholog); cellular response to arsenic-containing substance (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH cutaneous porphyria (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 2 68169314 68191428 + 22301074;30032202 116891387 MODEL JAAIVD010000001;XM_032892402;XM_032892403 XP_032748293;XP_032748294 uroporphyrinogen-III synthase protein-coding 625871512 LOC116893534 heterogeneous nuclear ribonucleoprotein A1-like 2 200714089 200808771 + 116893534 MODEL JAAIVD010000001 pseudo 625871513 LOC116914971 pleckstrin homology domain-containing family F member 2-like 13 19669326 19674446 + 116914971 MODEL JAAIVD010000008 pseudo 625871514 LOC116900555 olfactory receptor 4K3-like 5 89932213 89933151 + 22301074 116900555 MODEL JAAIVD010000023;XM_032902281 XP_032758172 protein-coding 625871517 Zmiz2 zinc finger MIZ-type containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); SMAD protein signal transduction (ortholog); transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Infant Death (ortholog); FOUND IN mitochondrion (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) 11 75313587 75330513 + 22301074;30032202 116912218 MODEL JAAIVD010000006;XM_032916167;XM_032916168;XM_032916169;XM_032916170;XM_032916171;XM_032916172;XM_032916173 XP_032772058;XP_032772059;XP_032772060;XP_032772061;XP_032772062;XP_032772063;XP_032772064 zinc finger MIZ domain-containing protein 2 protein-coding 625871555 Rmi1 RecQ mediated genome instability 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); glucose homeostasis (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); RecQ family helicase-topoisomerase III complex (ortholog) 14 79725891 79732879 - 22301074;30032202 116884032 MODEL JAAIVD010000009;XM_032885266;XM_032885267;XM_032885268 XP_032741157;XP_032741158;XP_032741159 recQ-mediated genome instability protein 1 protein-coding 625871568 LOC116914922 histone H3.3C-like 13 1881172 1881563 + 116914922 MODEL JAAIVD010000008 pseudo 625871569 Rora RAR related orphan receptor A ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH OR WITHOUT EPILEPSY OR CEREBELLAR ATAXIA (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 8 62996100 63719057 + 22301074;30032202 116906594 MODEL JAAIVD010000027;XM_032909335;XM_032909336;XM_032909337 XP_032765226;XP_032765227;XP_032765228 nuclear receptor ROR-alpha protein-coding 625871588 Tubal3 tubulin alpha like 3 14 18236000 18247710 + 22301074;30032202 116883876 MODEL JAAIVD010000009;XM_032885142 XP_032741033 tubulin alpha chain-like 3 protein-coding 625871596 LOC116904434 uncharacterized LOC116904434 6 117913351 117927912 - 116904434 MODEL JAAIVD010000024;XM_032907265 XP_032763156 uncharacterized protein LOC116904434 protein-coding 625871602 Keap1 kelch like ECH associated protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); cellular response to interleukin-4 (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); amyotrophic lateral sclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); centriolar satellite (ortholog) 8 17492211 17501358 - 30032202 116906876 MODEL JAAIVD010000027;XM_032909788;XM_032909789 XP_032765679;XP_032765680 kelch-like ECH-associated protein 1 protein-coding 625871615 LOC116898310 T-cell receptor-associated transmembrane adapter 1 INVOLVED IN negative regulation of receptor recycling (ortholog); negative regulation of transport (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN centriolar satellite (ortholog); mitotic spindle (ortholog); plasma membrane (ortholog) 4 33247034 33263682 - 30032202 116898310 MODEL JAAIVD010000003;XM_032899652 XP_032755543 protein-coding 625871623 LOC116900443 olfactory receptor 4C15-like 5 70862172 70863110 - 22301074 116900443 MODEL JAAIVD010000023;XM_032902183 XP_032758074 protein-coding 625871627 Capzb capping actin protein of muscle Z-line subunit beta ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); barbed-end actin filament capping (ortholog); cell projection organization (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN asymmetric synapse (ortholog); brush border (ortholog); cortical cytoskeleton (ortholog) 1 18905789 19005456 - 22301074;30032202 116893735 MODEL JAAIVD010000025;XM_032895451;XM_032895454 XP_032751342;XP_032751345 F-actin-capping protein subunit beta protein-coding 625871645 LOC116893437 glyceraldehyde-3-phosphate dehydrogenase-like 2 176082583 176099819 + 116893437 MODEL JAAIVD010000001 pseudo 625871646 LOC116889560 U2 spliceosomal RNA X 37767418 37767492 - 116889560 MODEL JAAIVD010000014 pseudo 625871647 LOC116890415 U7 small nuclear RNA 1 168508389 168508450 + 116890415 MODEL JAAIVD010000025;XR_004386616 snrna 625871650 Sdr39u1 short chain dehydrogenase/reductase family 39U member 1 FOUND IN mitochondrion (ortholog) 12 69121386 69124326 + 116913344 MODEL JAAIVD010000007;XM_032917495;XM_032917496 XP_032773386;XP_032773387 epimerase family protein SDR39U1 protein-coding 625871663 Elf5 E74 like ETS transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN ectoderm development (ortholog); ectodermal cell fate commitment (ortholog); mammary gland epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 81255855 81281950 + 22301074;30032202 116900515 MODEL JAAIVD010000023;XM_032902244;XM_032902245 XP_032758135;XP_032758136 ETS-related transcription factor Elf-5 protein-coding 625871676 LOC116910266 uncharacterized LOC116910266 9 33812242 33829999 + 116910266 MODEL JAAIVD010000002;XM_032914150 XP_032770041 uncharacterized protein LOC116910266 protein-coding 625871683 Rassf3 Ras association domain family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 199429117 199901288 - 22301074;30032202 116909509 MODEL JAAIVD010000025;XM_032913117 XP_032769008 ras association domain-containing protein 3 protein-coding 625871692 Mink1 misshapen like kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); brain development (ortholog); chemical synaptic transmission (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 9 50176513 50229092 + 22301074 116910537 MODEL JAAIVD010000002;XM_032914444 XP_032770335 misshapen-like kinase 1 protein-coding 625871729 Abhd16b abhydrolase domain containing 16B FOUND IN nucleoplasm (ortholog) 5 158578412 158580336 + 30032202 116902442 MODEL JAAIVD010000023;XM_032904983 XP_032760874 protein ABHD16B protein-coding 625871734 Klhl4 kelch like family member 4 FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) X 53002404 53084243 + 22301074 116889100 MODEL JAAIVD010000014;XM_032890268;XM_032890269 XP_032746159;XP_032746160 kelch-like protein 4 protein-coding 625871751 LOC116906174 transformer-2 protein homolog alpha-like 7 106335292 106337014 - 116906174 MODEL JAAIVD010000026 pseudo 625871752 LOC116904559 killer cell lectin-like receptor subfamily E member 1 6 18013691 18021774 - 30032202 116904559 MODEL JAAIVD010000024;XM_032907353;XM_032907354 XP_032763244;XP_032763245 protein-coding 625871768 Il17f interleukin 17F ENCODES a protein that exhibits cytokine activity (ortholog); cytokine binding (ortholog); cytokine receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Candidiasis, Familial, 6 (ortholog); FOUND IN extracellular space (ortholog) 4 98143131 98154596 - 22301074 116898104 MODEL JAAIVD010000003;XM_032899489 XP_032755380 interleukin-17F protein-coding 625871777 Ctnnd2 catenin delta 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); learning (ortholog); morphogenesis of a branching structure (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); perikaryon (ortholog); postsynaptic density (ortholog) 3 149788323 150184779 - 30032202 116897053 MODEL JAAIVD010000012;XM_032898675 XP_032754566 catenin delta-2 protein-coding 625871801 Atp6v1f ATPase H+ transporting V1 subunit F INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) 6 110096672 110099386 - 22301074;30032202 116904015 MODEL JAAIVD010000024;XM_032906836 XP_032762727 V-type proton ATPase subunit F protein-coding 625871807 LOC116887341 pyridoxal kinase 18 1764605 1788304 + 22301074;30032202 116887341 MODEL JAAIVD010000013;XM_032888934 XP_032744825 protein-coding 625871822 Cstf2 cleavage stimulation factor subunit 2 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH X-Linked Intellectual Developmental Disorder 113 (ortholog); FOUND IN cleavage body (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear body (ortholog) X 86385575 86410709 + 30032202 116888382 MODEL JAAIVD010000014;XM_032889658 XP_032745549 protein-coding 625871840 LOC116894062 olfactory receptor 51H1 2 102851816 102852766 - 22301074 116894062 MODEL JAAIVD010000001;XM_032895785 XP_032751676 protein-coding 625871843 LOC116906391 small nucleolar RNA SNORD113/SNORD114 family 7 127204009 127204090 + 116906391 MODEL JAAIVD010000026 pseudo 625871844 Cldn10 claudin 10 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); HELIX syndrome (ortholog); hypokalemia (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 12 7040685 7130615 - 22301074;30032202 116913721 MODEL JAAIVD010000007;XM_032918022;XM_032918023;XM_032918024;XM_032918025 XP_032773913;XP_032773914;XP_032773915;XP_032773916 claudin-10 protein-coding 625871859 LOC116889835 elongin-B-like 22301074;30032202 116889835 MODEL JAAIVD010001623;XM_032890670 XP_032746561 protein-coding 625871860 LOC116914026 40S ribosomal protein S29-like 12 48066798 48066968 + 22301074;30032202 116914026 MODEL JAAIVD010000007;XM_032918290 XP_032774181 protein-coding 625871863 Cphxl cytoplasmic polyadenylated homeobox like 17 19154097 19162532 - 22301074 116886639 MODEL JAAIVD010000011;XM_032888142 XP_032744033 cytoplasmic polyadenylated homeobox-like protein-coding 625871868 LOC116886430 uncharacterized LOC116886430 17 17687251 17710291 + 116886430 MODEL JAAIVD010000011;XR_004386103 ncrna 625871873 LOC116906177 60S ribosomal protein L18a-like 7 107747294 107784662 - 116906177 MODEL JAAIVD010000026 pseudo 625871874 LOC116903674 transcription elongation factor A protein 1-like 6 4891371 4892228 + 116903674 MODEL JAAIVD010000024 pseudo 625871875 Rimkla ribosomal modification protein rimK like family member A ENCODES a protein that exhibits N-acetyl-L-aspartate-L-glutamate ligase activity (ortholog); FOUND IN cytoplasm (ortholog) 1 37471137 37492454 + 22301074;30032202 116897446 MODEL JAAIVD010000025;XM_032899135 XP_032755026 N-acetylaspartylglutamate synthase A protein-coding 625871884 Zbtb16 zinc finger and BTB domain containing 16 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); central nervous system development (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); acute promyelocytic leukemia with PLZF/RARA (ortholog); caudal regression syndrome (ortholog); FOUND IN male germ cell nucleus (ortholog); nuclear body (ortholog); nuclear speck (ortholog) 8 43145301 43324830 - 22301074;30032202 116906553 MODEL JAAIVD010000027;XM_032909267;XM_032909268 XP_032765158;XP_032765159 zinc finger and BTB domain-containing protein 16 protein-coding 625871900 Fem1c fem-1 homolog C ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 15 40525872 40550680 + 22301074 116884456 MODEL JAAIVD010000010;XM_032885555 XP_032741446 protein fem-1 homolog C protein-coding 625871907 LOC116896944 uncharacterized LOC116896944 3 119153204 119327832 - 116896944 MODEL JAAIVD010000012;XR_004387380;XR_004387381;XR_004387382 ncrna 625871918 LOC116909428 olfactory receptor 1468-like 9 31734889 31735827 - 22301074;30032202 116909428 MODEL JAAIVD010000002;XM_032913003 XP_032768894 protein-coding 625871921 Aspscr1 ASPSCR1 tether for SLC2A4, UBX domain containing INVOLVED IN glucose homeostasis (ortholog); intracellular protein transport (ortholog); positive regulation of protein modification process (ortholog); ASSOCIATED WITH alveolar soft part sarcoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 63309993 63349624 - 22301074 116908960 MODEL JAAIVD010000002;XM_032912419;XM_032912420 XP_032768310;XP_032768311 tether containing UBX domain for GLUT4 protein-coding 625871944 Tspan7 tetraspanin 7 INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); non-syndromic X-linked intellectual disability 58 (ortholog); FOUND IN postsynapse (ortholog) X 10683062 10783747 - 22301074;30032202 116889214 MODEL JAAIVD010000014;XM_032890365 XP_032746256 tetraspanin-7 protein-coding 625871956 LOC116900859 olfactory receptor 8H1-like 5 63955563 63957275 - 22301074;30032202 116900859 MODEL JAAIVD010000023;XM_032902546 XP_032758437 protein-coding 625871960 LOC116890055 60S ribosomal protein L27a-like 1 210079328 210079764 + 116890055 MODEL JAAIVD010000025 pseudo 625871961 Khnyn KH and NYN domain containing 12 69126457 69136802 - 30032202 116913343 MODEL JAAIVD010000007;XM_032917493;XM_032917494;XR_004389609 XP_032773384;XP_032773385 protein KHNYN protein-coding 625871982 LOC116895509 40S ribosomal protein S21-like 3 111754006 111754260 + 22301074;30032202 116895509 MODEL JAAIVD010000012;XM_032896758 XP_032752649 protein-coding 625871985 LOC116900914 protein MAK16 homolog 5 78725731 78726380 + 116900914 MODEL JAAIVD010000023 pseudo 625871986 Chic2 cysteine rich hydrophobic domain 2 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog); plasma membrane (ortholog) 11 31781244 31816567 - 116912077 MODEL JAAIVD010000006;XM_032915956 XP_032771847 cysteine-rich hydrophobic domain-containing protein 2 protein-coding 625871996 LOC116892026 leukosialin-like 2 139570844 139572067 - 30032202 116892026 MODEL JAAIVD010000001;XM_032893484 XP_032749375 protein-coding 625872001 LOC116901048 60S ribosomal protein L7-like 5 133584180 133584967 - 116901048 MODEL JAAIVD010000023 pseudo 625872002 Slc25a28 solute carrier family 25 member 28 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); PARTICIPATES IN iron uptake pathway; FOUND IN mitochondrion (ortholog) 2 43183853 43195029 - 30032202 116891195 MODEL JAAIVD010000001;XM_032892016;XM_032892017;XM_032892019 XP_032747907;XP_032747908;XP_032747910 mitoferrin-2 protein-coding 625872015 Upk3a uroplakin 3A INVOLVED IN cell morphogenesis (ortholog); epithelial cell differentiation (ortholog); kidney development (ortholog); ASSOCIATED WITH CAKUT1 (ortholog); renal agenesis (ortholog); Renal Hypodysplasia/Aplasia 1 (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog) 1 254393989 254399035 + 116890165 MODEL JAAIVD010000025;XM_032890900 XP_032746791 uroplakin-3a protein-coding 625872025 Il7r interleukin 7 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-7 receptor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell proliferation (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colon cancer (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); nucleoplasm (ortholog) 3 171164655 171187524 + 22301074;30032202 116897131 MODEL JAAIVD010000012;XM_032898793 XP_032754684 interleukin-7 receptor subunit alpha protein-coding 625872036 Gpr45 G protein-coupled receptor 45 4 119182093 119188202 + 22301074;30032202 116899339 MODEL JAAIVD010000003;XM_032901026 XP_032756917 probable G-protein coupled receptor 45 protein-coding 625872041 LOC116887598 serine/arginine-rich splicing factor 6-like 18 9312987 9323840 + 116887598 MODEL JAAIVD010000013 pseudo 625872042 LOC116899866 small nucleolar RNA SNORA17 4 96549534 96549661 - 116899866 MODEL JAAIVD010000003;XR_004387860 snorna 625872045 Ccin calicin INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 91 (ortholog); FOUND IN cytoskeletal calyx (ortholog) 1 2540481 2542391 - 22301074 116885767 MODEL JAAIVD010000025;XM_032887087 XP_032742978 protein-coding 625872050 LOC116914246 uncharacterized LOC116914246 13 9418165 9419555 + 116914246 MODEL JAAIVD010000008;XR_004389737 ncrna 625872055 LOC116911625 AP-3 complex subunit sigma-1-like 10 32244227 32249042 + 116911625 MODEL JAAIVD010000005 pseudo 625872056 Psmc3 proteasome 26S subunit, ATPase 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); host-mediated perturbation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cataract (ortholog); DEAFNESS, CATARACT, IMPAIRED INTELLECTUAL DEVELOPMENT, AND POLYNEUROPATHY (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog); P-body (ortholog); perinuclear region of cytoplasm (ortholog) 5 65222466 65227836 + 22301074;30032202;9473711 116901608 MODEL AB005895;JAAIVD010000023;XM_032903645 BAE97632;XP_032759536 TBP-1 26S proteasome regulatory subunit 6A;Tat-binding protein-1 protein-coding 625872072 Shroom2 shroom family member 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical plasma membrane (ortholog) X 6228154 6386193 + 22301074;30032202 116888425 MODEL JAAIVD010000014;XM_032889695 XP_032745586 protein Shroom2 protein-coding 625872086 LOC116887280 phenazine biosynthesis-like domain-containing protein 2 18 23628124 23680987 - 22301074;30032202 116887280 MODEL JAAIVD010000013;XM_032888860 XP_032744751 protein-coding 625872100 LOC116909539 40S ribosomal protein S23-like 9 71645635 71646144 - 116909539 MODEL JAAIVD010000002 pseudo 625872101 LOC116906824 olfactory receptor 1078-like 1 156731511 156732440 - 22301074;30032202 116906824 MODEL JAAIVD010000025;XM_032909708 XP_032765599 protein-coding 625872104 Rcor1 REST corepressor 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Joubert syndrome (ortholog); FOUND IN DNA repair complex (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) 7 128612549 128687760 + 22301074;30032202 116905485 MODEL JAAIVD010000026;XM_032908482 XP_032764373 protein-coding 625872120 LOC116901897 uncharacterized LOC116901897 5 102443715 102823878 + 116901897 MODEL JAAIVD010000023;XR_004388029 ncrna 625872126 Ovca2 OVCA2 serine hydrolase domain containing ENCODES a protein that exhibits carboxylesterase activity (ortholog); INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 9 93900524 93901765 - 30032202 116910545 MODEL JAAIVD010000002;XM_032914452 XP_032770343 esterase OVCA2 protein-coding 625872132 LOC116914050 snRNA-activating protein complex subunit 5-like 12 87818395 87818582 + 116914050 MODEL JAAIVD010000007 pseudo 625872133 LOC116897427 U6 spliceosomal RNA 3 46502975 46503077 - 116897427 MODEL JAAIVD010000012;XR_004387468 snrna 625872136 LOC116897863 ran-specific GTPase-activating protein-like 4 21087374 21088186 - 22301074;30032202 116897863 MODEL JAAIVD010000003;XM_032899271 XP_032755162 protein-coding 625872141 LOC116900353 olfactory receptor 5W2-like 5 69219501 69220436 + 22301074;30032202 116900353 MODEL JAAIVD010000023;XM_032902107 XP_032757998 protein-coding 625872145 LOC116910265 zinc finger protein 354A 9 33723417 33737688 + 22301074;30032202 116910265 MODEL JAAIVD010000002;XM_032914148 XP_032770039 protein-coding 625872152 Wasl WASP like actin nucleation promoting factor ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); dendritic spine morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cap (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) 6 114678779 114727518 + 22301074;30032202;9322739 116904033 MODEL D88461;JAAIVD010000024;XM_032906868 BAA21534;XP_032762759 neural Wiskott-Aldrich syndrome protein protein-coding 625872167 LOC116914341 circumsporozoite protein-like 13 50980089 50986907 - 116914341 MODEL JAAIVD010000008;XM_032918561 XP_032774452 protein-coding 625872173 Fam133b family with sequence similarity 133 member B 6 135809292 135836206 + 116904113 MODEL JAAIVD010000024;XM_032906992;XM_032906993 XP_032762883;XP_032762884 protein FAM133B protein-coding 625872189 LOC116898562 uncharacterized LOC116898562 4 157633504 157636151 + 116898562 MODEL JAAIVD010000003;XM_032899769 XP_032755660 uncharacterized protein LOC116898562 protein-coding 625872195 LOC116888977 PC4 and SFRS1-interacting protein-like X 10890564 10929347 + 116888977 MODEL JAAIVD010000014 pseudo 625872196 LOC116904654 U6 spliceosomal RNA 6 44470439 44470552 - 116904654 MODEL JAAIVD010000024 pseudo 625872197 Rpl30 ribosomal protein L30 ENCODES a protein that exhibits selenocysteine insertion sequence binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH herpes simplex (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 1 208140642 208143715 - 22301074;30032202 116910470 MODEL JAAIVD010000025;XM_032914346 XP_032770237 60S ribosomal protein L30 protein-coding 625872206 LOC116902660 U6 spliceosomal RNA 5 17321796 17321902 - 116902660 MODEL JAAIVD010000023;XR_004388222 snrna 625872209 LOC116902805 putative vomeronasal receptor-like protein 4 6 83755054 83755995 + 22301074;30032202 116902805 MODEL JAAIVD010000024;XM_032905139 XP_032761030 protein-coding 625872213 Znf483 zinc finger protein 483 1 92479354 92492332 - 30032202 116901580 MODEL JAAIVD010000025;XM_032903582;XM_032903593;XM_032903600;XM_032903608 XP_032759473;XP_032759484;XP_032759491;XP_032759499 protein-coding 625872232 Popdc1 popeye domain cAMP effector 1 ENCODES a protein that exhibits cAMP binding (ortholog); structural molecule activity (ortholog); INVOLVED IN cell migration involved in heart development (ortholog); epithelial cell-cell adhesion (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2X (ortholog); genetic disease (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell junction (ortholog) 3 219221836 219256636 + 30032202 116895715 MODEL JAAIVD010000012;XM_032896902 XP_032752793 Bves blood vessel epicardial substance protein-coding 625872243 LOC116898058 glyceraldehyde-3-phosphate dehydrogenase-like 4 87164529 87165509 - 116898058 MODEL JAAIVD010000003 pseudo 625872244 Pard6g par-6 family cell polarity regulator gamma PARTICIPATES IN protein kinase C (PKC) signaling pathway; FOUND IN protein-containing complex (ortholog) 15 52115666 52184932 - 30032202 116884257 MODEL JAAIVD010000010;XM_032885341 XP_032741232 partitioning defective 6 homolog gamma protein-coding 625872251 LOC116907337 HAUS augmin-like complex subunit 8 8 31934101 31948936 - 116907337 MODEL JAAIVD010000027 pseudo 625872252 LOC116883546 prolactin-8A9-like 14 46454226 46462225 - 22301074;30032202 116883546 MODEL JAAIVD010000009;XM_032884716;XM_032884717 XP_032740607;XP_032740608 protein-coding 625872266 Kat8 lysine acetyltransferase 8 ENCODES a protein that exhibits acetyltransferase activity (ortholog); enzyme binding (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); epithelial to mesenchymal transition (ortholog); membraneless organelle assembly (ortholog); PARTICIPATES IN histone modification pathway; p53 signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Cardiomegaly (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome (ortholog); histone acetyltransferase complex (ortholog); kinetochore (ortholog) 2 73979103 73991276 - 22301074 116891447 MODEL JAAIVD010000001;XM_032892513 XP_032748404 histone acetyltransferase KAT8 protein-coding 625872281 Farsa phenylalanyl-tRNA synthetase subunit alpha ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Rajab Interstitial Lung Disease with Brain Calcifications 2 (ortholog); FOUND IN cytoplasm (ortholog); phenylalanine-tRNA ligase complex (ortholog) 17 15425203 15436650 - 22301074;30032202 116886399 MODEL JAAIVD010000011;XM_032887869 XP_032743760 phenylalanine--tRNA ligase alpha subunit protein-coding 625872298 LOC116884128 U6 spliceosomal RNA 14 75263167 75263265 + 116884128 MODEL JAAIVD010000009 pseudo 625872299 Tnc tenascin C ENCODES a protein that exhibits integrin binding (ortholog); syndecan binding (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cellular response to prostaglandin D stimulus (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asbestosis (ortholog); asthma (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix of synaptic cleft (ortholog); extracellular region (ortholog) 1 89557438 89641373 + 22301074 116901211 MODEL JAAIVD010000025;XM_032902931;XM_032902939;XM_032902948;XM_032902958 XP_032758822;XP_032758830;XP_032758839;XP_032758849 tenascin protein-coding 625872333 Me2 malic enzyme 2 ENCODES a protein that exhibits malate dehydrogenase (decarboxylating) (NAD+) activity (ortholog); malic enzyme activity (ortholog); INVOLVED IN regulation of NADP metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH Right Ventricular Hypertrophy (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 15 58180098 58224483 + 22301074;30032202 116884333 MODEL JAAIVD010000010;XM_032885468 XP_032741359 NAD-dependent malic enzyme, mitochondrial protein-coding 625872353 Nanos1 nanos C2HC-type zinc finger 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN cell migration (ortholog); cerebellar neuron development (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); spermatogenic failure 12 (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 2 55393305 55397252 - 30032202 116891307 MODEL JAAIVD010000001;XM_032892218 XP_032748109 nanos homolog 1 protein-coding 625872358 LOC116889911 olfactory receptor 6C2-like 1 160370576 160371522 - 116889911 MODEL JAAIVD010000025 pseudo 625872359 C2H19orf48 chromosome 2 C19orf48 homolog 2 155281389 155283627 - 116892220 MODEL JAAIVD010000001;XM_032893784 XP_032749675 uncharacterized protein C19orf48 homolog protein-coding 625872365 Smim1 small integral membrane protein 1 (Vel blood group) ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 1 6692079 6694735 + 116886094 MODEL JAAIVD010000025;XM_032887423;XM_032887432;XM_032887439;XM_032887447 XP_032743314;XP_032743323;XP_032743330;XP_032743338 small integral membrane protein 1 protein-coding 625872383 Alg2 ALG2 alpha-1,3/1,6-mannosyltransferase ENCODES a protein that exhibits alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(1)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase activity (ortholog); GDP-Man:Man(2)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein glycosylation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog) 1 100558845 100563403 - 30032202 116901991 MODEL JAAIVD010000025;XM_032904248 XP_032760139 alpha-1,3/1,6-mannosyltransferase ALG2 protein-coding 625872389 Wdr35 WD repeat domain 35 INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); connective tissue disease (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 7 29218333 29269757 + 22301074;30032202 116904864 MODEL JAAIVD010000026;XM_032907454;XM_032907455 XP_032763345;XP_032763346 WD repeat-containing protein 35 protein-coding 625872422 LOC116900302 olfactory receptor 141 5 63833449 63834384 - 22301074;30032202 116900302 MODEL JAAIVD010000023;XM_032902058 XP_032757949 protein-coding 625872425 Abca2 ATP binding cassette subfamily A member 2 ENCODES a protein that exhibits ATP binding (ortholog); ceramide floppase activity (ortholog); endopeptidase regulator activity (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); ceramide translocation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH POOR GROWTH AND WITH OR WITHOUT SEIZURES OR ATAXIA (ortholog); sensory ataxic neuropathy, dysarthria, and ophthalmoparesis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) 5 11734070 11753850 - 22301074;30032202 116901301 MODEL JAAIVD010000023;XM_032903098 XP_032758989 ATP-binding cassette sub-family A member 2 protein-coding 625872478 Cacna1h calcium voltage-gated channel subunit alpha1 H ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN aldosterone biosynthetic process (ortholog); calcium ion import (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); autistic disorder (ortholog); beta thalassemia (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 9 2638294 2696463 - 22301074;30032202 116908574 MODEL JAAIVD010000002;XM_032911785;XM_032911786 XP_032767676;XP_032767677 voltage-dependent T-type calcium channel subunit alpha-1H protein-coding 625872522 Zswim1 zinc finger SWIM-type containing 1 FOUND IN nucleus (ortholog) 5 153132586 153137040 - 22301074 116902347 MODEL JAAIVD010000023;XM_032904830 XP_032760721 zinc finger SWIM domain-containing protein 1 protein-coding 625872528 LOC116884081 small nucleolar RNA SNORA17 14 4386686 4386808 - 116884081 MODEL JAAIVD010000009 pseudo 625872529 LOC116886543 uncharacterized LOC116886543 17 13659273 13665704 + 116886543 MODEL JAAIVD010000011;XR_004386111 ncrna 625872533 Clasp1 cytoplasmic linker associated protein 1 ENCODES a protein that exhibits dystroglycan binding (ortholog); kinetochore binding (ortholog); microtubule binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); basement membrane organization (ortholog); cell division (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Cough (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); centrosomal corona (ortholog) 10 10972310 11193945 + 30032202 116911086 MODEL JAAIVD010000005;XM_032914877;XM_032914878;XM_032914879;XM_032914880;XM_032914881;XM_032914882;XM_032914884;XM_032914885;XM_032914886;XM_032914887;XM_032914888;XM_032914889;XM_032914890;XM_032914891;XM_032914892;XM_032914893;XM_032914894;XM_032914895;XM_032914896;XM_032914897;XM_032914898;XM_032914900;XM_032914901;XM_032914902;XM_032914903;XM_032914904;XM_032914905;XM_032914906;XM_032914907;XM_032914908;XM_032914909;XM_032914911 XP_032770768;XP_032770769;XP_032770770;XP_032770771;XP_032770772;XP_032770773;XP_032770775;XP_032770776;XP_032770777;XP_032770778;XP_032770779;XP_032770780;XP_032770781;XP_032770782;XP_032770783;XP_032770784;XP_032770785;XP_032770786;XP_032770787;XP_032770788;XP_032770789;XP_032770791;XP_032770792;XP_032770793;XP_032770794;XP_032770795;XP_032770796;XP_032770797;XP_032770798;XP_032770799;XP_032770800;XP_032770802 CLIP-associating protein 1 protein-coding 625872612 Tdg thymine DNA glycosylase ENCODES a protein that exhibits ATP binding (ortholog); chloride ion binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 1 165785910 165805563 - 22301074;30032202 116907641 MODEL JAAIVD010000025;XM_032910709;XM_032910718 XP_032766600;XP_032766609 G/T mismatch-specific thymine DNA glycosylase protein-coding 625872631 LOC116890739 uncharacterized LOC116890739 2 2520768 2533513 - 116890739 MODEL JAAIVD010000001;XR_004386781 ncrna 625872636 LOC116887772 small nucleolar RNA SNORD83 18 7842121 7842199 + 116887772 MODEL JAAIVD010000013;XR_004386269 snorna 625872639 LOC116886524 thymosin beta-10-like 17 2723861 2724107 - 22301074;30032202 116886524 MODEL JAAIVD010000011;XM_032888036 XP_032743927 protein-coding 625872644 Rab18 RAB18, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); import into nucleus (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Warburg micro syndrome (ortholog); Warburg micro syndrome 3 (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) 14 29077298 29109691 - 22301074 116883159 MODEL JAAIVD010000009;XM_032884183 XP_032740074 ras-related protein Rab-18 protein-coding 625872655 Cep55 centrosomal protein 55 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); establishment of protein localization (ortholog); midbody abscission (ortholog); ASSOCIATED WITH COVID-19 (ortholog); encephalopathy due to defective mitochondrial and peroxisomal fission 1 (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); Flemming body (ortholog); intercellular bridge (ortholog) 2 35688987 35704121 - 30032202 116891125 MODEL JAAIVD010000001;XM_032891846;XM_032891847;XM_032891848 XP_032747737;XP_032747738;XP_032747739 centrosomal protein of 55 kDa protein-coding 625872673 Whr1 winged helix repair factor 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN positive regulation of Ras protein signal transduction (ortholog); positive regulation of single strand break repair (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 18 7420031 7429820 - 30032202 116886839 MODEL JAAIVD010000013;XM_032888287 XP_032744178 Stk19 serine/threonine kinase 19;serine/threonine-protein kinase 19 protein-coding 625872684 Zbtb11 zinc finger and BTB domain containing 11 ASSOCIATED WITH autosomal recessive intellectual developmental disorder 69 (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN nucleoplasm (ortholog) 4 40103612 40139462 + 22301074;30032202 116898899 MODEL JAAIVD010000003;XM_032900297 XP_032756188 zinc finger and BTB domain-containing protein 11 protein-coding 625872699 LOC116883242 ADP/ATP translocase 4-like 14 62580493 62584731 + 116883242 MODEL JAAIVD010000009 pseudo 625872700 LOC116911252 small nuclear ribonucleoprotein G-like 10 59173974 59174323 - 22301074;30032202 116911252 MODEL JAAIVD010000005;XM_032915152 XP_032771043 protein-coding 625872705 LOC116912944 U7 small nuclear RNA 11 76714580 76714633 - 116912944 MODEL JAAIVD010000006 pseudo 625872706 Lin52 lin-52 DREAM MuvB core complex component 7 98563531 98657027 + 22301074;30032202 116905273 MODEL JAAIVD010000026;XM_032908125;XM_032908126;XM_032908127;XM_032908129;XM_032908130;XM_032908131;XM_032908132 XP_032764016;XP_032764017;XP_032764018;XP_032764020;XP_032764021;XP_032764022;XP_032764023 protein lin-52 homolog protein-coding 625872741 LOC116888599 olfactory receptor 13C9 FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 1 96719743 96720693 - 22301074 116888599 MODEL JAAIVD010000025;XM_032889899 XP_032745790 protein-coding 625872744 LOC116890525 small nucleolar RNA SNORA17 1 267557659 267557790 - 116890525 MODEL JAAIVD010000025;XR_004386707 snorna 625872747 Nme2 NME/NM23 nucleoside diphosphate kinase 2 ENCODES a protein that exhibits coenzyme A binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo pyrimidine biosynthetic pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 9 51573624 51579064 + 22301074;30032202 116908822 MODEL JAAIVD010000002;XM_032912240 XP_032768131 nucleoside diphosphate kinase B protein-coding 625872756 Slc25a42 solute carrier family 25 member 42 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); AMP transport (ortholog); ATP transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial myopathy (ortholog); Recurrent Metabolic Crises with Variable Encephalomyopathic Features and Neurologic Regression (ortholog); FOUND IN mitochondrion (ortholog) 13 12451060 12474224 - 22301074 116914598 MODEL JAAIVD010000008;XM_032918959 XP_032774850 mitochondrial coenzyme A transporter SLC25A42 protein-coding 625872768 LOC116889479 U1 spliceosomal RNA X 12472300 12472461 + 116889479 MODEL JAAIVD010000014;XR_004386430 snrna 625872771 Sanbr SANT and BTB domain regulator of CSR ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN isotype switching (ortholog) 11 93333621 93382751 + 116912915 MODEL JAAIVD010000006;XM_032917176 XP_032773067 Kiaa1841 uncharacterized protein KIAA1841 homolog protein-coding 625872797 Hrob homologous recombination factor with OB-fold ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA synthesis involved in DNA repair (ortholog); female gamete generation (ortholog); ASSOCIATED WITH Ovarian Dysgenesis 11 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN site of DNA damage (ortholog) 9 61546016 61562098 + 22301074;30032202 116909170 MODEL JAAIVD010000002;XM_032912661 XP_032768552 uncharacterized protein C17orf53 homolog protein-coding 625872811 Ica1l islet cell autoantigen 1 like INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN acrosomal vesicle (ortholog) 5 6320202 6367818 + 22301074;30032202 116901197 MODEL JAAIVD010000023;XM_032902893;XM_032902894;XM_032902895;XM_032902896;XM_032902897;XM_032902898;XM_032902899;XM_032902900;XM_032902901;XM_032902902;XM_032902903 XP_032758784;XP_032758785;XP_032758786;XP_032758787;XP_032758788;XP_032758789;XP_032758790;XP_032758791;XP_032758792;XP_032758793;XP_032758794 islet cell autoantigen 1-like protein protein-coding 625872848 LOC116896379 glutathione S-transferase Yb-3 3 50327821 50333276 + 22301074;30032202 116896379 MODEL JAAIVD010000012;XM_032897502 XP_032753393 protein-coding 625872860 Mrpl20 mitochondrial ribosomal protein L20 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 1 4824778 4829278 - 22301074;30032202 116891775 MODEL JAAIVD010000025;XM_032893120 XP_032749011 39S ribosomal protein L20, mitochondrial protein-coding 625872868 LOC116896015 annexin-2 receptor-like 3 176954221 176954730 + 116896015 MODEL JAAIVD010000012 pseudo 625872869 Cnn1 calponin 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); FOUND IN cytoskeleton (ortholog) 8 18349443 18359215 + 22301074 116906815 MODEL JAAIVD010000027;XM_032909694 XP_032765585 calponin-1 protein-coding 625872880 LOC116892349 uncharacterized LOC116892349 2 165966765 165970075 + 116892349 MODEL JAAIVD010000001;XR_004386945 ncrna 625872885 LOC116903658 purine nucleoside phosphorylase-like 6 1010334 1163788 + 116903658 MODEL JAAIVD010000024 pseudo 625872886 Ube2e2 ubiquitin conjugating enzyme E2 E2 ENCODES a protein that exhibits ISG15 transferase activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ISG15-protein conjugation (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH hepatocellular adenoma (ortholog); hepatocellular carcinoma (ortholog); type 2 diabetes mellitus (ortholog) 12 89149205 89419365 + 30032202 116913543 MODEL JAAIVD010000007;XM_032917744 XP_032773635 ubiquitin-conjugating enzyme E2 E2 protein-coding 625872894 LOC116884834 protocadherin beta-2-like 15 921836 924627 + 22301074 116884834 MODEL JAAIVD010000010;XM_032886072 XP_032741963 protein-coding 625872899 Slc6a9 solute carrier family 6 member 9 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN glycine import across plasma membrane (ortholog); glycine secretion, neurotransmission (ortholog); glycine transport (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN apical plasma membrane (ortholog); asymmetric synapse (ortholog); basal plasma membrane (ortholog) 1 39152247 39172357 - 22301074;30032202 116898065 MODEL JAAIVD010000025;XM_032899463 XP_032755354 sodium- and chloride-dependent glycine transporter 1 protein-coding 625872915 Odf4 outer dense fiber of sperm tails 4 FOUND IN motile cilium (ortholog); outer dense fiber (ortholog) 9 48520447 48526145 - 30032202 116909699 MODEL JAAIVD010000002;XM_032913364;XM_032913365 XP_032769255;XP_032769256 outer dense fiber protein 4 protein-coding 625872929 Myh10 myosin heavy chain 10 ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament bundle distribution (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital fibrosis of the extraocular muscles (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN actomyosin (ortholog); axon (ortholog); brush border (ortholog) 9 48288229 48415067 + 22301074 116909538 MODEL JAAIVD010000002;XM_032913155 XP_032769046 myosin-10 protein-coding 625872975 Tm9sf4 transmembrane 9 superfamily member 4 INVOLVED IN cell adhesion (ortholog); phagocytosis (ortholog); positive regulation of protein exit from endoplasmic reticulum (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog) 5 132477912 132525601 + 22301074;30032202 116902137 MODEL JAAIVD010000023;XM_032904464;XM_032904465 XP_032760355;XP_032760356 protein-coding 625873001 LOC116908190 peptidyl-prolyl cis-trans isomerase A-like 8 54997329 54997734 - 116908190 MODEL JAAIVD010000027 pseudo 625873002 LOC116900092 beta-lactoglobulin-1A/1C-like 5 11460589 11463848 + 30032202 116900092 MODEL JAAIVD010000023;XM_032901871 XP_032757762 protein-coding 625873012 Zbtb24 zinc finger and BTB domain containing 24 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency-centromeric instability-facial anomalies syndrome 2 (ortholog); Kabuki Syndrome 1 (ortholog) 18 41142495 41156441 + 22301074;30032202 116887182 MODEL JAAIVD010000013;XM_032888737 XP_032744628 zinc finger and BTB domain-containing protein 24 protein-coding 625873023 Kif3b kinesin family member 3B ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); oligospermia (ortholog); optic atrophy (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cilium (ortholog) 5 132606621 132646196 + 22301074;30032202 116902142 MODEL JAAIVD010000023;XM_032904471 XP_032760362 kinesin-like protein KIF3B protein-coding 625873036 Arsk arylsulfatase family member K ENCODES a protein that exhibits arylsulfatase activity (ortholog); glucuronate-2-sulfatase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); mucopolysaccharidosis (ortholog); mucopolysaccharidosis X (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 3 221071571 221132545 + 116897356 MODEL JAAIVD010000012;XM_032899114 XP_032755005 arylsulfatase K protein-coding 625873048 Lgals3bp galectin 3 binding protein ASSOCIATED WITH liver cirrhosis (ortholog); FOUND IN extracellular space (ortholog) 9 65666743 65674131 + 22301074;30032202 116909794 MODEL JAAIVD010000002;XM_032913490 XP_032769381 galectin-3-binding protein protein-coding 625873057 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 13 31413421 31413492 + 116915200 MODEL JAAIVD010000008 trna 625873058 Deup1 deuterosome assembly protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH glioblastoma (ortholog); lung non-small cell carcinoma (ortholog); polycystic kidney disease (ortholog); FOUND IN deuterosome (ortholog) 8 11328976 11373240 - 30032202 116906966 MODEL JAAIVD010000027;XM_032909886;XM_032909887;XM_032909888;XM_032909889;XM_032909890 XP_032765777;XP_032765778;XP_032765779;XP_032765780;XP_032765781 protein-coding 625873080 Sel1l3 SEL1L family member 3 11 52923958 53030414 + 22301074 116911926 MODEL JAAIVD010000006;XM_032915812 XP_032771703 protein sel-1 homolog 3 protein-coding 625873108 LOC116897544 small nucleolar RNA SNORA17 3 71681366 71681497 - 116897544 MODEL JAAIVD010000012;XR_004387558 snorna 625873111 Hoxb3 homeobox B3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); cartilage development (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleoplasm (ortholog) 9 58035914 58042746 - 22301074;30032202 116908483 MODEL JAAIVD010000002;XM_032911637;XM_032911638 XP_032767528;XP_032767529 homeobox protein Hox-B3 protein-coding 625873120 Npffr1 neuropeptide FF receptor 1 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); plasma membrane (ortholog) 18 27420667 27451376 + 22301074;30032202 116887345 MODEL JAAIVD010000013;XM_032888939 XP_032744830 protein-coding 625873127 Apc APC regulator of WNT signaling pathway ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); axis specification (ortholog); axonogenesis (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Abdominal Fibromatosis (ortholog); Aberrant Crypt Foci (ortholog); acinar cell carcinoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); axonal growth cone (ortholog) 15 10036601 10128388 - 22301074;30032202 116884282 MODEL JAAIVD010000010;XM_032885365;XM_032885366;XM_032885367;XM_032885368;XM_032885369;XM_032885370;XM_032885371;XM_032885372;XM_032885373;XM_032885374;XM_032885375;XM_032885377;XM_032885378;XM_032885379 XP_032741256;XP_032741257;XP_032741258;XP_032741259;XP_032741260;XP_032741261;XP_032741262;XP_032741263;XP_032741264;XP_032741265;XP_032741266;XP_032741268;XP_032741269;XP_032741270 adenomatous polyposis coli protein protein-coding 625873178 LOC116900125 olfactory receptor 50-like 5 14393240 14394171 + 22301074;30032202 116900125 MODEL JAAIVD010000023;XM_032901899 XP_032757790 protein-coding 625873181 Ghrhr growth hormone releasing hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone-releasing hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); membrane (ortholog) 6 85684312 85697608 - 22301074;30032202 116902822 MODEL JAAIVD010000024;XM_032905151;XM_032905152 XP_032761042;XP_032761043 growth hormone-releasing hormone receptor protein-coding 625873202 LOC116884910 flavin reductase (NADPH)-like 15 7674062 7679162 - 116884910 MODEL JAAIVD010000010;XM_032886133 XP_032742024 protein-coding 625873207 LOC116898429 eukaryotic translation initiation factor 4 gamma 1-like 4 91578693 91589269 + 116898429 MODEL JAAIVD010000003 pseudo 625873208 Ttk TTK protein kinase ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN female meiosis chromosome segregation (ortholog); meiotic spindle assembly checkpoint signaling (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog) 8 77965343 78002941 + 22301074;30032202 116907793 MODEL JAAIVD010000027;XM_032910935 XP_032766826 dual specificity protein kinase TTK protein-coding 625873235 LOC116901711 reticulocalbin-1-like 5 83320813 83326150 - 116901711 MODEL JAAIVD010000023 pseudo 625873236 LOC116894527 vomeronasal type-2 receptor 116-like 2 175499056 175524922 + 22301074;30032202 116894527 MODEL JAAIVD010000001;XM_032896227;XM_032896228;XM_032896229 XP_032752118;XP_032752119;XP_032752120 protein-coding 625873251 Fuom fucose mutarotase ENCODES a protein that exhibits fucose binding (ortholog); L-fucose mutarotase activity (ortholog); racemase and epimerase activity, acting on carbohydrates and derivatives (ortholog); INVOLVED IN female mating behavior (ortholog); fucose metabolic process (ortholog); GDP-L-fucose salvage (ortholog); FOUND IN cytosol (ortholog) 2 61766429 61769505 + 30032202 116893863 MODEL JAAIVD010000001;XM_032895583 XP_032751474 protein-coding 625873261 Josd1 Josephin domain containing 1 ENCODES a protein that exhibits deubiquitinase activity (ortholog); INVOLVED IN cell motility (ortholog); endocytosis (ortholog); membrane biogenesis (ortholog); FOUND IN plasma membrane (ortholog) X 76500529 76502994 + 22301074;30032202 116888004 MODEL JAAIVD010000014;XM_032889425 XP_032745316 josephin-1 protein-coding 625873266 LOC116895790 histone H3.3A-like 3 58960427 58961113 + 116895790 MODEL JAAIVD010000012 pseudo 625873267 Serp1 stress associated endoplasmic reticulum protein 1 INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); glucose metabolic process (ortholog); muscle organ morphogenesis (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 3 97034963 97038941 - 22301074;30032202 116896852 MODEL JAAIVD010000012;XM_032898362 XP_032754253 stress-associated endoplasmic reticulum protein 1 protein-coding 625873274 Stk33 serine/threonine kinase 33 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN manchette assembly (ortholog); protein autophosphorylation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); depressive disorder (ortholog); spermatogenic failure 93 (ortholog); FOUND IN manchette (ortholog) 2 92142990 92215460 + 22301074;30032202 116893943 MODEL JAAIVD010000001;XM_032895660 XP_032751551 serine/threonine-protein kinase 33 protein-coding 625873290 LOC116897824 myosin light polypeptide 6-like 4 9155729 9156102 - 116897824 MODEL JAAIVD010000003 pseudo 625873291 LOC116911860 U2 spliceosomal RNA 10 3682963 3683182 + 116911860 MODEL JAAIVD010000005 pseudo 625873292 LOC116889149 glycine receptor subunit alpha-4-like X 88515430 88532214 - 22301074;30032202 116889149 MODEL JAAIVD010000014;XM_032890317 XP_032746208 protein-coding 625873303 Gkap1 G kinase anchoring protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cGMP-mediated signaling (ortholog); positive regulation of insulin receptor signaling pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 14 79854961 79891927 + 22301074;30032202 116883399 MODEL JAAIVD010000009;XM_032884526 XP_032740417 G kinase-anchoring protein 1 protein-coding 625873318 Ca13 carbonic anhydrase 13 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); FOUND IN cytosol (ortholog); myelin sheath (ortholog) 3 157529653 157553703 - 22301074;30032202 116897082 MODEL JAAIVD010000012;XM_032898705 XP_032754596 protein-coding 625873329 Gpr152 G protein-coupled receptor 152 ENCODES a protein that exhibits identical protein binding (ortholog) 2 3498852 3500411 - 22301074;30032202 116893599 MODEL JAAIVD010000001;XM_032895301 XP_032751192 probable G-protein coupled receptor 152 protein-coding 625873332 Trim33 tripartite motif containing 33 ENCODES a protein that exhibits co-SMAD binding (ortholog); promoter-specific chromatin binding (ortholog); R-SMAD binding (ortholog); INVOLVED IN gene expression (ortholog); negative regulation of BMP signaling pathway (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH developmental dysplasia of the hip (ortholog); ovarian cancer (ortholog); FOUND IN nucleus (ortholog) 3 54679254 54755637 - 22301074 116896447 MODEL JAAIVD010000012;XM_032897601;XM_032897602 XP_032753492;XP_032753493 E3 ubiquitin-protein ligase TRIM33 protein-coding 625873356 Rergl RERG like ASSOCIATED WITH prostate cancer (ortholog) 6 10012842 10021885 + 22301074 116904528 MODEL JAAIVD010000024;XM_032907321 XP_032763212 ras-related and estrogen-regulated growth inhibitor-like protein protein-coding 625873365 LOC116913032 U4 spliceosomal RNA 11 73320042 73320126 + 116913032 MODEL JAAIVD010000006 pseudo 625873366 LOC116888415 40S ribosomal protein S9-like X 12985969 12986598 - 116888415 MODEL JAAIVD010000014 pseudo 625873367 Ccr2 C-C motif chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); CCR2 chemokine receptor binding (ortholog); chemokine (C-C motif) ligand 12 binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cellular defense response (ortholog); cellular homeostasis (ortholog); ASSOCIATED WITH age related macular degeneration (ortholog); aggressive periodontitis (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) 8 115176474 115177595 + 22301074;30032202 116907709 MODEL JAAIVD010000027;XM_032910833 XP_032766724 C-C chemokine receptor type 2 protein-coding 625873370 LOC116900811 60S ribosomal protein L29-like 5 30522338 30523032 + 22301074;30032202 116900811 MODEL JAAIVD010000023;XM_032902524 XP_032758415 protein-coding 625873374 Cited4 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 4 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); response to estrogen (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 36330100 36331311 - 22301074;30032202 116887062 MODEL JAAIVD010000025;XM_032888560 XP_032744451 cbp/p300-interacting transactivator 4 protein-coding 625873379 LOC116895112 U2 spliceosomal RNA 2 172045178 172045355 - 116895112 MODEL JAAIVD010000001 pseudo 625873380 Xkrx XK related X-linked X 86480249 86492062 - 22301074 116888693 MODEL JAAIVD010000014;XM_032889983 XP_032745874 XK-related protein 2 protein-coding 625873387 LOC116894986 small nucleolar RNA SNORA19 2 55377827 55377958 + 116894986 MODEL JAAIVD010000001;XR_004387177 snorna 625873390 Poglut1 protein O-glucosyltransferase 1 ENCODES a protein that exhibits glucosyltransferase activity (ortholog); UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN axial mesoderm development (ortholog); circulatory system development (ortholog); muscle tissue development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2Z (ortholog); Dowling-Degos disease (ortholog); Dowling-Degos Disease 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 4 23476440 23497827 - 30032202 116898845 MODEL JAAIVD010000003;XM_032900200 XP_032756091 protein-coding 625873405 Tnnc2 troponin C2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH congenital myopathy 15 (ortholog); FOUND IN troponin complex (ortholog) 5 153178318 153181219 + 22301074;30032202 116900766 MODEL JAAIVD010000023;XM_032902477;XM_032902478 XP_032758368;XP_032758369 troponin C, skeletal muscle protein-coding 625873418 LOC116883243 60S ribosomal protein L29-like 14 62761150 62761627 - 116883243 MODEL JAAIVD010000009 pseudo 625873419 R3hcc1 R3H domain and coiled-coil containing 1 12 54625259 54632797 + 22301074 116913173 MODEL JAAIVD010000007;XM_032917375 XP_032773266 R3H and coiled-coil domain-containing protein 1 protein-coding 625873430 LOC116883621 proteasome activator complex subunit 1-like 14 34612738 34613468 + 116883621 MODEL JAAIVD010000009;XR_004385774 pseudo 625873433 Gtpbp4 GTP binding protein 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); preribosome binding (ortholog); INVOLVED IN maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH end stage renal disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 14 23152897 23172556 + 22301074;30032202 116883601 MODEL JAAIVD010000009;XM_032884783 XP_032740674 nucleolar GTP-binding protein 1 protein-coding 625873454 LOC116883354 histone H2B type 1-C/E/F/G/I-like 14 41630707 41642405 - 22301074;30032202 116883354 MODEL JAAIVD010000009;XM_032884433 XP_032740324 protein-coding 625873460 LOC116892232 zinc finger protein 175-like 2 155785867 155792511 - 30032202 116892232 MODEL JAAIVD010000001;XM_032893803 XP_032749694 protein-coding 625873468 Syp synaptophysin ENCODES a protein that exhibits cholesterol binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); modulation of chemical synaptic transmission (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); cochlear disease (ortholog); FOUND IN basal part of cell (ortholog); excitatory synapse (ortholog); membrane (ortholog) X 14476414 14496989 - 22301074;30032202 116888361 MODEL JAAIVD010000014;XM_032889630 XP_032745521 protein-coding 625873479 LOC116890463 olfactory receptor 10AD1-like 1 271003936 271013294 - 22301074 116890463 MODEL JAAIVD010000025;XM_032891008 XP_032746899 protein-coding 625873484 Sars2 seryl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH HUPRA Syndrome (ortholog); FOUND IN mitochondrion (ortholog) 2 167253514 167265693 - 22301074;30032202 116892379 MODEL JAAIVD010000001;XM_032894042 XP_032749933 serine--tRNA ligase, mitochondrial protein-coding 625873504 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 2615751 2615832 + 116895125 MODEL JAAIVD010000001 trna 625873505 LOC116904348 SHC-transforming protein 1-like 6 72667832 72708235 - 22301074;30032202 116904348 MODEL JAAIVD010000024;XM_032907242 XP_032763133 protein-coding 625873509 Rexo4 REX4 homolog, 3'-5' exonuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); double-stranded DNA binding (ortholog); endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN nuclear speck (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 9692818 9703131 + 22301074;30032202 116901250 MODEL JAAIVD010000023;XM_032903003 XP_032758894 RNA exonuclease 4 protein-coding 625873521 LOC116905914 uncharacterized LOC116905914 7 128555306 128560003 - 116905914 MODEL JAAIVD010000026;XR_004388577 ncrna 625873525 LOC116889439 U6 spliceosomal RNA X 88602236 88602338 - 116889439 MODEL JAAIVD010000014;XR_004386401 snrna 625873528 LOC116906922 uncharacterized LOC116906922 1 157548953 157552998 - 116906922 MODEL JAAIVD010000025;XR_004388781 ncrna 625873532 Usp53 ubiquitin specific peptidase 53 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN action potential (ortholog); epithelial cell apoptotic process (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); genetic disease (ortholog); primary ovarian insufficiency (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog) 3 36836197 36895878 + 22301074;30032202 116896293 MODEL JAAIVD010000012;XM_032897376 XP_032753267 inactive ubiquitin carboxyl-terminal hydrolase 53 protein-coding 625873552 LOC116900954 60S ribosomal protein L19-like 5 96139588 96153956 + 116900954 MODEL JAAIVD010000023 pseudo 625873553 LOC116884649 60S ribosomal protein L9-like 15 40915056 40920637 + 116884649 MODEL JAAIVD010000010 pseudo 625873554 Vma21 vacuolar ATPase assembly factor VMA21 INVOLVED IN lysosomal lumen acidification (ortholog); vacuolar proton-transporting V-type ATPase complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Vacuolar Myopathy (ortholog); X-linked myopathy with excessive autophagy (ortholog); FOUND IN lysosome (ortholog) 13 402287 408984 - 22301074;30032202 116915026 MODEL JAAIVD010000008;XM_032919435 XP_032775326 vacuolar ATPase assembly integral membrane protein VMA21 protein-coding 625873561 Inafm1 InaF motif containing 1 2 172786869 172787613 + 116892603 MODEL JAAIVD010000001;XM_032894397 XP_032750288 putative transmembrane protein INAFM1 protein-coding 625873566 LOC116905373 interferon alpha-inducible protein 27, mitochondrial-like 7 114730348 114736735 + 22301074;30032202 116905373 MODEL JAAIVD010000026;XM_032908311 XP_032764202 protein-coding 625873576 LOC116900450 olfactory receptor 4C15-like 5 71021695 71022663 - 22301074 116900450 MODEL JAAIVD010000023;XM_032902191 XP_032758082 protein-coding 625873579 LOC116884024 small EDRK-rich factor 2-like 14 12630540 12630712 + 116884024 MODEL JAAIVD010000009 pseudo 625873580 LOC116904353 cytochrome c oxidase subunit 6B1-like 6 76488870 76489293 - 116904353 MODEL JAAIVD010000024 pseudo 625873581 Trim3 tripartite motif containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of toll-like receptor 3 signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 104448114 104470797 - 22301074;30032202 116891820 MODEL JAAIVD010000001;XM_032893182 XP_032749073 tripartite motif-containing protein 3 protein-coding 625873597 Piezo2 piezo type mechanosensitive ion channel component 2 ENCODES a protein that exhibits mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN detection of mechanical stimulus involved in sensory perception (ortholog); monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 3 (ortholog); FOUND IN cuticular plate (ortholog); neuronal cell body membrane (ortholog); stereocilium (ortholog) 15 68905324 69272499 - 30032202 116884327 MODEL JAAIVD010000010;XM_032885461;XM_032885462;XM_032885463 XP_032741352;XP_032741353;XP_032741354 piezo-type mechanosensitive ion channel component 2 protein-coding 625873659 LOC116912253 glyceraldehyde-3-phosphate dehydrogenase-like 11 24654134 24655176 - 116912253 MODEL JAAIVD010000006 pseudo 625873660 Mafb MAF bZIP transcription factor B ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN abducens nerve formation (ortholog); brain segmentation (ortholog); cornified envelope assembly (ortholog); ASSOCIATED WITH BROWN SYNDROME (ortholog); cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog); transcription regulator complex (ortholog) 5 139652425 139655783 - 30032202 116902245 MODEL JAAIVD010000023;XM_032904663 XP_032760554 transcription factor MafB protein-coding 625873665 LOC116887149 olfactory receptor 2B6-like 18 10917520 10918629 - 22301074 116887149 MODEL JAAIVD010000013;XM_032888696 XP_032744587 protein-coding 625873669 Slc26a10p Solute carrier family 26 member 10 1 205608464 205616623 - 22301074;30032202 116909868 MODEL JAAIVD010000025;XM_032913602 XP_032769493 Slc26a10 protein-coding 625873691 LOC116901260 histone acetyltransferase KAT2B-like 1 121461630 121462902 + 116901260 MODEL JAAIVD010000025 pseudo 625873692 LOC116892760 formyl peptide receptor-related sequence 4 2 182409008 182409979 - 28652375;30032202 116892760 A0A220QSC3 MODEL JAAIVD010000001;MF175623;XM_032894638 ASK09533;XP_032750529 Fpr-rs4 protein-coding 625873695 LOC116891837 uncharacterized LOC116891837 1 4866464 4867548 - 116891837 MODEL JAAIVD010000025;XR_004386863 ncrna 625873699 LOC116887382 olfactory receptor 2B11-like 18 11122582 11123510 + 116887382 MODEL JAAIVD010000013 pseudo 625873700 Il23a interleukin 23 subunit alpha ENCODES a protein that exhibits interleukin-23 receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); defense response to Gram-negative bacterium (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Amebic Liver Abscess (ortholog); Animal Toxoplasmosis (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog); interleukin-23 complex (ortholog) 1 155765926 155768132 - 22301074;30032202 116905971 MODEL JAAIVD010000025;XM_032908982 XP_032764873 interleukin-23 subunit alpha protein-coding 625873708 LOC116900426 olfactory receptor 4C15-like 5 70577027 70577962 + 22301074 116900426 MODEL JAAIVD010000023;XM_032902168 XP_032758059 protein-coding 625873711 Mrpl36 mitochondrial ribosomal protein L36 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 11 75671632 75672090 - 22301074;30032202 116912032 MODEL JAAIVD010000006;XM_032915916 XP_032771807 39S ribosomal protein L36, mitochondrial protein-coding 625873714 Dlgap4 DLG associated protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); regulation of synapse maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cholinergic synapse (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 5 135961509 136107807 + 22301074;30032202 116902207 MODEL JAAIVD010000023;XM_032904598;XM_032904599;XM_032904600;XM_032904601;XM_032904602;XM_032904603;XM_032904604 XP_032760489;XP_032760490;XP_032760491;XP_032760492;XP_032760493;XP_032760494;XP_032760495 disks large-associated protein 4 protein-coding 625873751 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92884273 92884344 + 116904844 MODEL JAAIVD010000024 trna 625873752 LOC116885555 general transcription factor II-I repeat domain-containing protein 2 16 19833073 19868051 - 30032202 116885555 MODEL JAAIVD010000004;XM_032886847 XP_032742738 protein-coding 625873772 Samm50 SAMM50 sorting and assembly machinery component INVOLVED IN cristae formation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 253579225 253603989 + 22301074;30032202 116914518 MODEL JAAIVD010000025;XM_032918852 XP_032774743 sorting and assembly machinery component 50 homolog protein-coding 625873791 Herc6 HECT and RLD domain containing E3 ubiquitin protein ligase family member 6 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 83428035 83482939 + 30032202 116903733 MODEL JAAIVD010000024;XM_032906418 XP_032762309 probable E3 ubiquitin-protein ligase HERC6 protein-coding 625873819 LOC116893463 short coiled-coil protein-like 2 179695680 179710040 + 30032202 116893463 MODEL JAAIVD010000001;XM_032895223 XP_032751114 protein-coding 625873825 Zc3h7b zinc finger CCCH-type containing 7B ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog) 1 251487874 251535583 + 22301074;30032202 116914046 MODEL JAAIVD010000025;XM_032918329;XM_032918337;XM_032918344 XP_032774220;XP_032774228;XP_032774235 zinc finger CCCH domain-containing protein 7B protein-coding 625873858 LOC116899885 small nucleolar RNA SNORA17 4 67388662 67388789 - 116899885 MODEL JAAIVD010000003;XR_004387869 snorna 625873861 Hey1 hes related family bHLH transcription factor with YRPW motif 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving promoters; Notch signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 142817894 142821577 - 22301074;30032202 116897025 MODEL JAAIVD010000012;XM_032898638 XP_032754529 hairy/enhancer-of-split related with YRPW motif protein 1 protein-coding 625873870 LOC116900961 ubiquitin-40S ribosomal protein S27a-like 5 98950436 98950960 + 116900961 MODEL JAAIVD010000023 pseudo 625873871 LOC116884880 40S ribosomal protein S26-like 15 22811457 22811834 + 116884880 MODEL JAAIVD010000010 pseudo 625873872 LOC116897560 small nucleolar RNA SNORA17 3 134979832 134979963 + 116897560 MODEL JAAIVD010000012;XR_004387573 snorna 625873875 Slc22a17 solute carrier family 22 member 17 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN siderophore transport (ortholog); FOUND IN organelle membrane (ortholog); plasma membrane (ortholog) 12 70078116 70085135 + 22301074 116913531 MODEL JAAIVD010000007;XM_032917730;XM_032917731 XP_032773621;XP_032773622 protein-coding 625873891 LOC116909132 olfactory receptor 2B11 9 69327334 69329149 - 22301074 116909132 MODEL JAAIVD010000002;XM_032912617 XP_032768508 protein-coding 625873896 LOC116886107 uncharacterized LOC116886107 17 16132907 16139904 - 116886107 MODEL JAAIVD010000011;XR_004386089 ncrna 625873901 LOC116883831 zinc finger protein 844-like 14 76820807 76830153 + 22301074 116883831 MODEL JAAIVD010000009;XM_032885092 XP_032740983 protein-coding 625873908 LOC116914837 uncharacterized LOC116914837 13 17976595 17983995 + 116914837 MODEL JAAIVD010000008;XR_004389776;XR_004389777 ncrna 625873915 Fktn fukutin ENCODES a protein that exhibits phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2M (ortholog); cardiomyopathy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 1 97478841 97530576 + 30032202 116901814 MODEL JAAIVD010000025;XM_032903975;XM_032903983;XM_032903991;XM_032904000 XP_032759866;XP_032759874;XP_032759882;XP_032759891 protein-coding 625873938 Sucla2 succinate-CoA ligase ADP-forming subunit beta ENCODES a protein that exhibits succinate-CoA ligase (ADP-forming) activity (ortholog); INVOLVED IN succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); mitochondrial DNA depletion syndrome (ortholog); FOUND IN mitochondrion (ortholog); succinate-CoA ligase complex (ADP-forming) (ortholog) 12 50768006 50815281 - 22301074;30032202 116913358 MODEL JAAIVD010000007;XM_032917516 XP_032773407 succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial protein-coding 625873953 Mecom MDS1 and EVI1 complex locus ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 3 124187577 124735766 - 22301074;30032202 116896972 MODEL JAAIVD010000012;XM_032898551 XP_032754442 histone-lysine N-methyltransferase MECOM protein-coding 625873974 LOC116908940 40S ribosomal protein S17-like 9 50038117 50038586 + 22301074;30032202 116908940 MODEL JAAIVD010000002;XM_032912398 XP_032768289 protein-coding 625873979 LOC116908243 NACHT, LRR and PYD domains-containing protein 4A-like 8 84891697 84893357 - 116908243 MODEL JAAIVD010000027 pseudo 625873980 Prkaa2 protein kinase AMP-activated catalytic subunit alpha 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); ciliary basal body (ortholog) 1 49503773 49573781 + 22301074;30032202 116899441 MODEL JAAIVD010000025;XM_032901203;XM_032901213;XM_032901222 XP_032757094;XP_032757104;XP_032757113 5'-AMP-activated protein kinase catalytic subunit alpha-2 protein-coding 625873999 LOC116913182 60S ribosomal protein L37-like 12 59938455 59938802 - 116913182 MODEL JAAIVD010000007 pseudo 625874000 LOC116897529 U1 spliceosomal RNA 3 156068867 156069029 - 116897529 MODEL JAAIVD010000012;XR_004387544 snrna 625874003 Qpctl glutaminyl-peptide cyclotransferase like ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); FOUND IN Golgi apparatus (ortholog) 2 171473271 171482785 + 22301074;30032202 116892548 MODEL JAAIVD010000001;XM_032894317;XM_032894318 XP_032750208;XP_032750209 glutaminyl-peptide cyclotransferase-like protein protein-coding 625874015 LOC116884673 40S ribosomal protein SA-like 15 38966626 38967518 + 116884673 MODEL JAAIVD010000010 pseudo 625874016 Tbx6 T-box transcription factor 6 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN mesoderm formation (ortholog); mesodermal cell fate specification (ortholog); negative regulation of neuron maturation (ortholog); ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 75111878 75116001 - 22301074;30032202 116891510 MODEL JAAIVD010000001;XM_032892644 XP_032748535 T-box transcription factor TBX6 protein-coding 625874028 LOC116912451 60S ribosomal protein L9-like 11 40893779 40894366 + 116912451 MODEL JAAIVD010000006 pseudo 625874029 LOC116895969 actin-related protein 3-like 3 151568343 151569441 + 116895969 MODEL JAAIVD010000012 pseudo 625874030 Vstm2b V-set and transmembrane domain containing 2B 2 158349141 158378691 - 116892242 MODEL JAAIVD010000001;XM_032893811 XP_032749702 V-set and transmembrane domain-containing protein 2B protein-coding 625874040 Il12rb1 interleukin 12 receptor subunit beta 1 ENCODES a protein that exhibits coreceptor activity (ortholog); cytokine binding (ortholog); interleukin-12 receptor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); interleukin-12-mediated signaling pathway (ortholog); interleukin-23-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); genetic disease (ortholog); immunodeficiency 27A (ortholog); FOUND IN external side of plasma membrane (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) 13 13051491 13063841 + 22301074 116914616 MODEL JAAIVD010000008;XM_032918978 XP_032774869 interleukin-12 receptor subunit beta-1 protein-coding 625874059 Plxna4 plexin A4 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) 6 107053859 107494200 + 22301074;30032202 116903989 MODEL JAAIVD010000024;XM_032906796 XP_032762687 plexin-A4 protein-coding 625874095 LOC116915110 formin-like protein 5 13 10276420 10281365 + 116915110 MODEL JAAIVD010000008;XM_032919540;XR_004389797;XR_004389798 XP_032775431 protein-coding 625874106 Amn amnion associated transmembrane protein ENCODES a protein that exhibits cargo receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); cobalamin transport (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Edema (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) 7 128849254 128855561 + 30032202 116905915 MODEL JAAIVD010000026;XM_032908901;XM_032908902 XP_032764792;XP_032764793 protein amnionless protein-coding 625874124 Psca prostate stem cell antigen ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); regulation of neurotransmitter receptor activity (ortholog); ASSOCIATED WITH duodenal ulcer (ortholog); Helicobacter Infections (ortholog); linitis plastica (ortholog); FOUND IN plasma membrane (ortholog) 1 247458334 247460290 + 116890129 MODEL JAAIVD010000025;XM_032890867 XP_032746758 protein-coding 625874131 Myh1 myosin heavy chain 1 INVOLVED IN muscle contraction (ortholog); sensory perception of sound (ortholog); FOUND IN A band (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); intercalated disc (ortholog) 9 46802537 46826361 + 22301074;8227143 116908642 MODEL JAAIVD010000002;X72591;XM_032911904;XM_032911905 CAA51189;XP_032767795;XP_032767796 myosin-1 protein-coding 625874179 Capza2 capping actin protein of muscle Z-line subunit alpha 2 ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); renal cell carcinoma (ortholog); FOUND IN brush border (ortholog); cortical cytoskeleton (ortholog); F-actin capping protein complex (ortholog) 6 121291079 121325682 - 22301074;30032202 116904059 MODEL JAAIVD010000024;XM_032906919 XP_032762810 F-actin-capping protein subunit alpha-2 protein-coding 625874193 Eef1akmt3 EEF1A lysine methyltransferase 3 ENCODES a protein that exhibits heat shock protein binding (ortholog); methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); cytoplasm (ortholog) 1 205462381 205471176 - 30032202 116890040 MODEL JAAIVD010000025;XM_032890811 XP_032746702 protein-coding 625874199 Dnah8 dynein axonemal heavy chain 8 ENCODES a protein that exhibits microtubule motor activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cocaine-Related Disorders (ortholog); gestational diabetes (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) 18 3000003 3245325 - 22301074;30032202 116887301 MODEL JAAIVD010000013;XM_032888883 XP_032744774 dynein heavy chain 8, axonemal protein-coding 625874294 LOC116913525 eukaryotic peptide chain release factor subunit 1-like 12 68812077 68813320 - 116913525 MODEL JAAIVD010000007 pseudo 625874295 LOC116909086 phospholipid hydroperoxide glutathione peroxidase-like 9 94334997 94335946 - 116909086 MODEL JAAIVD010000002 pseudo 625874296 LOC116911867 U4 spliceosomal RNA 10 22572490 22572623 + 116911867 MODEL JAAIVD010000005;XR_004389382 snrna 625874299 LOC116888025 heat shock transcription factor, X-linked member 3-like X 81702126 81704683 + 22301074 116888025 MODEL JAAIVD010000014;XM_032889435 XP_032745326 protein-coding 625874305 Ppp4r3b protein phosphatase 4 regulatory subunit 3B INVOLVED IN positive regulation of gluconeogenesis (ortholog); regulation of double-strand break repair (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 11 96789986 96838306 + 30032202 116912115 MODEL JAAIVD010000006;XM_032916019 XP_032771910 serine/threonine-protein phosphatase 4 regulatory subunit 3B protein-coding 625874325 LOC116913154 microfibrillar-associated protein 1-like 12 44815026 44858567 - 116913154 MODEL JAAIVD010000007 pseudo 625874326 Kif24 kinesin family member 24 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); microtubule depolymerization (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); neuropathy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 1 4117304 4156002 + 22301074;30032202 116891398 MODEL JAAIVD010000025;XM_032892426 XP_032748317 kinesin-like protein KIF24 protein-coding 625874342 Spib Spi-B transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN immature B cell differentiation (ortholog); macrophage differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mycoplasma pneumoniae pneumonia (ortholog); primary biliary cholangitis (ortholog) 2 155001457 155007268 + 22301074;30032202 116892205 MODEL JAAIVD010000001;XM_032893754;XM_032893755;XM_032893756;XM_032893757;XM_032893758 XP_032749645;XP_032749646;XP_032749647;XP_032749648;XP_032749649 transcription factor Spi-B protein-coding 625874361 Rnf38 ring finger protein 38 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN male gonad development (ortholog); protein ubiquitination (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 1 2279432 2386938 + 116890868 MODEL JAAIVD010000025;XM_032891446;XM_032891455;XM_032891464;XM_032891474;XM_032891483;XM_032891493;XM_032891502;XM_032891510;XM_032891519 XP_032747337;XP_032747346;XP_032747355;XP_032747365;XP_032747374;XP_032747384;XP_032747393;XP_032747401;XP_032747410 E3 ubiquitin-protein ligase RNF38 protein-coding 625874393 Edc4 enhancer of mRNA decapping 4 PARTICIPATES IN microRNA pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 25620824 25632836 + 22301074;30032202 116886250 MODEL JAAIVD010000011;XM_032887665;XM_032887666;XM_032887667;XM_032887668 XP_032743556;XP_032743557;XP_032743558;XP_032743559 enhancer of mRNA-decapping protein 4 protein-coding 625874431 LOC116896462 signal recognition particle subunit SRP72-like 1 82070209 82177590 + 116896462 MODEL JAAIVD010000025 pseudo 625874432 Kcnk2 potassium two pore domain channel subfamily K member 2 ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated channel activity (ortholog); mechanosensitive potassium channel activity (ortholog); INVOLVED IN cardiac ventricle development (ortholog); cellular response to arachidonate (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH brain ischemia (ortholog); congestive heart failure (ortholog); depressive disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); axon (ortholog) 10 67310818 67444747 - 22301074;30032202 116911098 MODEL JAAIVD010000005;XM_032914929 XP_032770820 potassium channel subfamily K member 2 protein-coding 625874443 Ndrg1 N-myc downstream regulated 1 ENCODES a protein that exhibits cadherin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mast cell activation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); cytoplasm (ortholog) 1 241045135 241086590 - 30032202 116912299 MODEL JAAIVD010000025;XM_032916310 XP_032772201 protein NDRG1 protein-coding 625874463 Amn1 antagonist of mitotic exit network 1 homolog FOUND IN microvillus membrane (ortholog) 6 6816782 6843294 - 22301074;30032202 116903117 MODEL JAAIVD010000024;XM_032905453;XM_032905454 XP_032761344;XP_032761345 protein AMN1 homolog protein-coding 625874477 Ripor3 RIPOR family member 3 ASSOCIATED WITH prostate cancer (ortholog) 5 150001594 150028870 + 116902304 MODEL JAAIVD010000023;XM_032904748 XP_032760639 protein-coding 625874501 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889661 MODEL JAAIVD010000045 trna 625874502 LOC116886556 uncharacterized LOC116886556 17 14224301 14229546 + 116886556 MODEL JAAIVD010000011;XR_004386115 ncrna 625874506 LOC116889773 olfactory receptor 1J2-like 22301074 116889773 MODEL JAAIVD010000124;XM_032890630 XP_032746521 protein-coding 625874507 Esyt3 extended synaptotagmin 3 FOUND IN cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 90656930 90701893 - 22301074 116907217 MODEL JAAIVD010000027;XM_032910183 XP_032766074 extended synaptotagmin-3 protein-coding 625874534 LOC116897527 small nucleolar RNA SNORA48 3 85630073 85630212 + 116897527 MODEL JAAIVD010000012;XR_004387543 snorna 625874537 Gabrg1 gamma-aminobutyric acid type A receptor subunit gamma1 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); ASSOCIATED WITH prostate cancer (ortholog); trigeminal neuralgia (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 11 27634095 27709557 - 22301074;30032202 116912411 MODEL JAAIVD010000006;XM_032916472;XM_032916473 XP_032772363;XP_032772364 gamma-aminobutyric acid receptor subunit gamma-1 protein-coding 625874553 LOC116909059 keratin-associated protein 17-1 9 54732518 54732838 - 116909059 MODEL JAAIVD010000002;XM_032912537 XP_032768428 protein-coding 625874556 Gpr160 G protein-coupled receptor 160 FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 3 125080930 125124326 + 30032202 116896978 MODEL JAAIVD010000012;XM_032898561;XM_032898562 XP_032754452;XP_032754453 probable G-protein coupled receptor 160 protein-coding 625874569 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50240822 50240893 - 116911918 MODEL JAAIVD010000005 trna 625874570 LOC116892060 heat shock cognate 71 kDa protein-like 2 148289753 148291379 - 116892060 MODEL JAAIVD010000001 pseudo 625874571 Atg16l2 autophagy related 16 like 2 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); cytosol (ortholog) 2 99597811 99610345 - 22301074;30032202 116891754 MODEL JAAIVD010000001;XM_032893069;XM_032893070;XM_032893071;XM_032893072;XM_032893073;XM_032893074;XM_032893075;XM_032893076;XM_032893077;XM_032893078 XP_032748960;XP_032748961;XP_032748962;XP_032748963;XP_032748964;XP_032748965;XP_032748966;XP_032748967;XP_032748968;XP_032748969 autophagy-related protein 16-2 protein-coding 625874622 LOC116894251 olfactory receptor 14A2-like 2 114915615 114916554 - 116894251 MODEL JAAIVD010000001 pseudo 625874623 LOC116891934 AP-3 complex subunit sigma-2 2 120330545 120370169 + 22301074;30032202 116891934 MODEL JAAIVD010000001;XM_032893374 XP_032749265 protein-coding 625874633 Abr ABR activator of RhoGEF and GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 9 95122214 95318103 - 22301074;30032202 116908894 MODEL JAAIVD010000002;XM_032912343;XM_032912344;XM_032912345;XM_032912346;XM_032912348;XM_032912349 XP_032768234;XP_032768235;XP_032768236;XP_032768237;XP_032768239;XP_032768240 active breakpoint cluster region-related protein protein-coding 625874678 Tfpi2 tissue factor pathway inhibitor 2 INVOLVED IN cellular response to fluid shear stress (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog) 6 134641348 134646223 + 22301074;30032202 116902984 MODEL JAAIVD010000024;XM_032905303 XP_032761194 protein-coding 625874687 LOC116889639 Y-linked testis-specific protein 1-like 22301074;30032202 116889639 MODEL JAAIVD010000021;XM_032890548 XP_032746439 protein-coding 625874688 LOC116903705 kinetochore-associated protein NSL1 homolog 6 7048916 7050369 + 116903705 MODEL JAAIVD010000024 pseudo 625874689 LOC116906438 small nucleolar RNA SNORA17 7 41799030 41799164 + 116906438 MODEL JAAIVD010000026;XR_004388698 snorna 625874692 Vax2 ventral anterior homeobox 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); camera-type eye development (ortholog); dorsal/ventral axis specification (ortholog); ASSOCIATED WITH syndromic microphthalmia 5 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 62512103 62536423 - 22301074;30032202 116903600 MODEL JAAIVD010000024;XM_032906242 XP_032762133 protein-coding 625874698 Fjx1 four-jointed box kinase 1 INVOLVED IN retina layer formation (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); FOUND IN extracellular space (ortholog) 5 80286301 80289028 - 30032202 116901678 MODEL JAAIVD010000023;XM_032903791 XP_032759682 four-jointed box protein 1 protein-coding 625874703 LOC116906847 nuclear transport factor 2-like 1 157365405 157367129 + 30032202 116906847 MODEL JAAIVD010000025;XM_032909745 XP_032765636 protein-coding 625874708 Ncoa2 nuclear receptor coactivator 2 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); chromatin binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Chronobiology Disorders (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); nuclear body (ortholog) 1 147788299 147868292 - 22301074;30032202 116903968 MODEL JAAIVD010000025;XM_032906771 XP_032762662 protein-coding 625874733 Adam19 ADAM metallopeptidase domain 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metalloendopeptidase activity involved in amyloid precursor protein catabolic process (ortholog); SH3 domain binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); heart development (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH congenital heart disease (ortholog); lung adenocarcinoma (ortholog); squamous cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); nucleus (ortholog) 9 28777995 28868181 + 22301074;30032202 116908728 MODEL JAAIVD010000002;XM_032912071 XP_032767962 disintegrin and metalloproteinase domain-containing protein 19 protein-coding 625874760 LOC116885413 40S ribosomal protein S27 16 9322598 9322926 - 22301074;30032202 116885413 MODEL JAAIVD010000004;XM_032886700 XP_032742591 protein-coding 625874764 Cimip2a ciliary microtubule inner protein 2A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); sperm flagellum (ortholog) 5 11958606 11962893 - 116901318 MODEL JAAIVD010000023;XM_032903130 XP_032759021 Fam166a family with sequence similarity 166 member A;protein FAM166A protein-coding 625874774 Kdm5b lysine demethylase 5B ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone H3K4 demethylase activity (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 65 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 1078328 1150141 - 22301074;30032202 116911737 MODEL JAAIVD010000005;XM_032915717 XP_032771608 lysine-specific demethylase 5B protein-coding 625874805 Glmp glycosylated lysosomal membrane protein INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein localization to lysosome (ortholog); protein stabilization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); lysosome (ortholog); membrane (ortholog) 3 65223151 65226641 - 30032202 116896692 MODEL JAAIVD010000012;XM_032898084 XP_032753975 protein-coding 625874815 LOC116885130 acyl-CoA-binding protein-like 16 36399560 36399976 + 22301074;30032202 116885130 MODEL JAAIVD010000004;XM_032886287 XP_032742178 protein-coding 625874820 LOC116896003 UDP-glucuronosyltransferase 3A2-like 3 171252882 171270482 - 116896003 MODEL JAAIVD010000012 pseudo 625874821 Smim40 small integral membrane protein 40 18 6914865 6915107 + 116887500 MODEL JAAIVD010000013;XM_032889119 XP_032745010 protein-coding 625874824 LOC116896688 polyamine-modulated factor 1 3 65153702 65172767 + 22301074;30032202 116896688 MODEL JAAIVD010000012;XM_032898077 XP_032753968 protein-coding 625874833 Hbegf heparin binding EGF like growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell migration (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); Cardiotoxicity (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 15 7867903 7878942 + 30032202 116884645 MODEL JAAIVD010000010;XM_032885793 XP_032741684 proheparin-binding EGF-like growth factor protein-coding 625874843 LOC116915052 elongin-B-like 13 46598494 46598849 - 116915052 MODEL JAAIVD010000008 pseudo 625874844 LOC116906061 exosome complex component RRP4-like 7 50489790 50490679 - 116906061 MODEL JAAIVD010000026 pseudo 625874845 Tnip3 TNFAIP3 interacting protein 3 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog) 6 75983458 76026992 - 30032202 116902778 MODEL JAAIVD010000024;XM_032905120 XP_032761011 TNFAIP3-interacting protein 3 protein-coding 625874856 Itih6 inter-alpha-trypsin inhibitor heavy chain family member 6 ASSOCIATED WITH Dwarfism (ortholog); Neurodevelopmental Disorders (ortholog) X 12184710 12214231 + 22301074 116889333 MODEL JAAIVD010000014;XM_032890451 XP_032746342 inter-alpha-trypsin inhibitor heavy chain H6 protein-coding 625874872 Il18 interleukin 18 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-18 receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell population proliferation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog) 8 45029011 45055185 + 22301074 116906731 MODEL JAAIVD010000027;XM_032909544 XP_032765435 interleukin-18 protein-coding 625874883 Pcna proliferating cell nuclear antigen ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); dinucleotide insertion or deletion binding (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to UV (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alcoholic Liver Diseases (ortholog); Ataxia Telangiectasia Like Disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 5 111963794 111967807 - 22301074;30032202 116902001 MODEL JAAIVD010000023;XM_032904265 XP_032760156 protein-coding 625874893 LOC116898511 poly(rC)-binding protein 4-like 4 132765696 132766633 + 116898511 MODEL JAAIVD010000003 pseudo 625874894 Cnr1 cannabinoid receptor 1 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); axonal fasciculation (ortholog); cannabinoid signaling pathway (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); GABA-ergic synapse (ortholog) 1 109070115 109095467 - 22301074 116902250 MODEL JAAIVD010000025;XM_032904671;XM_032904678;XM_032904685;XM_032904694;XM_032904704 XP_032760562;XP_032760569;XP_032760576;XP_032760585;XP_032760595 protein-coding 625874913 LOC116898540 40S ribosomal protein S8-like 4 146586534 146589880 - 116898540 MODEL JAAIVD010000003 pseudo 625874914 LOC116907873 60S ribosomal protein L27-like 8 93858785 93859185 + 116907873 MODEL JAAIVD010000027 pseudo 625874915 Peak1 pseudopodium enriched atypical kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); focal adhesion assembly (ortholog); protein autophosphorylation (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); focal adhesion (ortholog) 8 50124096 50327380 - 22301074;30032202 116906763 MODEL JAAIVD010000027;XM_032909600;XM_032909603;XM_032909604;XM_032909605;XM_032909606 XP_032765491;XP_032765494;XP_032765495;XP_032765496;XP_032765497 inactive tyrosine-protein kinase PEAK1 protein-coding 625874937 Dtymk deoxythymidylate kinase ENCODES a protein that exhibits ATP binding (ortholog); dTMP kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); dTDP biosynthetic process (ortholog); dTTP biosynthetic process (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); NEURODEGENERATION, CHILDHOOD-ONSET, WITH PROGRESSIVE MICROCEPHALY (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 165706723 165715245 - 22301074;30032202 116899672 MODEL JAAIVD010000003;XM_032901688;XM_032901689;XM_032901690 XP_032757579;XP_032757580;XP_032757581 thymidylate kinase protein-coding 625874955 Fcmr Fc mu receptor ENCODES a protein that exhibits high-affinity IgM receptor activity (ortholog); IgM binding (ortholog); polymeric immunoglobulin binding (ortholog); INVOLVED IN Fc receptor-mediated immune complex endocytosis (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); immunoglobulin transcytosis in epithelial cells (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); centrosome (ortholog); early endosome membrane (ortholog) 10 4925501 4942997 - 30032202 116911235 MODEL JAAIVD010000005;XM_032915135 XP_032771026 Fc fragment of IgM receptor;fas apoptotic inhibitory molecule 3 protein-coding 625874967 LOC116896066 casein kinase I-like 3 207916028 207917039 + 116896066 MODEL JAAIVD010000012 pseudo 625874968 Rps6ka4 ribosomal protein S6 kinase A4 ENCODES a protein that exhibits ATP binding (ortholog); histone H3S10 kinase activity (ortholog); histone H3S28 kinase activity (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 957011 967842 + 22301074;30032202 116894823 MODEL JAAIVD010000001;XM_032896496 XP_032752387 ribosomal protein S6 kinase alpha-4 protein-coding 625874989 LOC116909902 olfactory receptor 2AK2-like 9 39350058 39350978 - 22301074 116909902 MODEL JAAIVD010000002;XM_032913653 XP_032769544 protein-coding 625874992 LOC116913464 complement C1q and tumor necrosis factor-related protein 9 12 63650962 63662855 - 22301074 116913464 MODEL JAAIVD010000007;XM_032917668;XM_032917669 XP_032773559;XP_032773560 protein-coding 625875003 Kcnq5 potassium voltage-gated channel subfamily Q member 5 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 46 (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN calyx of Held (ortholog); clathrin coat (ortholog); plasma membrane (ortholog) 4 98752531 99302666 - 22301074;30032202 116899250 MODEL JAAIVD010000003;XM_032900855 XP_032756746 potassium voltage-gated channel subfamily KQT member 5 protein-coding 625875021 LOC116893084 protein crumbs homolog 1-like 2 51406384 51478818 - 116893084 MODEL JAAIVD010000001 pseudo 625875022 LOC116887153 60S ribosomal protein L21 1 38036969 38037451 - 22301074;30032202 116887153 MODEL JAAIVD010000025;XM_032888704 XP_032744595 protein-coding 625875025 Mnt MAX network transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular senescence (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Classical Lissencephalies and Subcortical Band Heterotopias (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleoplasm (ortholog) 9 93572982 93588075 + 22301074;30032202 116908977 MODEL JAAIVD010000002;XM_032912442 XP_032768333 max-binding protein MNT protein-coding 625875035 LOC116892918 ADP-ribosylation factor 1-like 2 203566651 203568399 + 116892918 MODEL JAAIVD010000001;XR_004386985 pseudo 625875039 LOC116886754 5S ribosomal RNA 17 43155405 43155523 - 116886754 MODEL JAAIVD010000011;XR_004386156 rrna 625875042 Aldh9a1 aldehyde dehydrogenase 9 family member A1 ENCODES a protein that exhibits 4-trimethylammoniobutyraldehyde dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); amine binding (ortholog); INVOLVED IN aldehyde metabolic process (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 46674132 46689653 + 30032202 116911209 MODEL JAAIVD010000005;XM_032915086 XP_032770977 4-trimethylaminobutyraldehyde dehydrogenase protein-coding 625875057 Mafg MAF bZIP transcription factor G ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); in utero embryonic development (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); intrahepatic cholestasis (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 9 63390223 63397791 + 30032202 116908519 MODEL JAAIVD010000002;XM_032911694 XP_032767585 transcription factor MafG protein-coding 625875065 Pkig cAMP-dependent protein kinase inhibitor gamma ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein import into nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 5 154244215 154310860 - 22301074;30032202 116902375 MODEL JAAIVD010000023;XM_032904874;XM_032904875;XM_032904876;XM_032904878 XP_032760765;XP_032760766;XP_032760767;XP_032760769 protein-coding 625875081 LOC116884941 tubulin alpha-1C chain-like 15 23155318 23157432 - 116884941 MODEL JAAIVD010000010 pseudo 625875082 LOC116886277 40S ribosomal protein S2-like 17 16716234 16716882 - 22301074;30032202 116886277 MODEL JAAIVD010000011;XM_032887698 XP_032743589 protein-coding 625875087 LOC116904256 olfactory receptor 6C76-like 6 30199136 30203064 - 22301074;30032202 116904256 MODEL JAAIVD010000024;XM_032907210 XP_032763101 protein-coding 625875092 LOC116887962 GTPase HRas-like X 65922007 65922961 - 116887962 MODEL JAAIVD010000014 pseudo 625875093 LOC116884854 nucleolar protein 4-like 15 20834078 20871981 + 116884854 MODEL JAAIVD010000010;XM_032886097 XP_032741988 protein-coding 625875101 LOC116910870 uncharacterized LOC116910870 10 52072243 52074380 - 116910870 MODEL JAAIVD010000005;XR_004389287 ncrna 625875106 Armc3 armadillo repeat containing 3 INVOLVED IN flagellated sperm motility (ortholog); ribophagy (ortholog); spermatid development (ortholog); ASSOCIATED WITH Familial Persistent Stuttering 4 (ortholog) 14 4780799 4865338 - 22301074 116883437 MODEL JAAIVD010000009;XM_032884577;XM_032884578;XM_032884579;XM_032884580 XP_032740468;XP_032740469;XP_032740470;XP_032740471 armadillo repeat-containing protein 3 protein-coding 625875137 Tmem165 transmembrane protein 165 INVOLVED IN calcium ion transport (ortholog); Golgi calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIk (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endosome membrane (ortholog); Golgi apparatus (ortholog) 11 32928671 32954061 + 30032202 116912652 MODEL JAAIVD010000006;XM_032916772 XP_032772663 protein-coding 625875147 Utp14a UTP14A small subunit processome component FOUND IN cytosol (ortholog); nucleolus (ortholog) X 110125805 110152203 - 30032202 116888650 MODEL JAAIVD010000014;XM_032889940 XP_032745831 U3 small nucleolar RNA-associated protein 14 homolog A protein-coding 625875166 LOC116896612 protein argonaute-1 1 31833722 31868472 + 22301074 116896612 MODEL JAAIVD010000025;XM_032897871;XM_032897879;XM_032897887;XM_032897897 XP_032753762;XP_032753770;XP_032753778;XP_032753788 protein-coding 625875198 Nalf2 NALCN channel auxiliary factor 2 X 58450839 58474547 + 30032202 116889238 MODEL JAAIVD010000014;XM_032890388 XP_032746279 Fam155b family with sequence similarity 155 member B;transmembrane protein FAM155B protein-coding 625875205 LOC116894463 ubiquitin-conjugating enzyme E2 C-like 2 165666843 165667246 - 116894463 MODEL JAAIVD010000001 pseudo 625875206 LOC116899947 U2 spliceosomal RNA 4 43815716 43815817 - 116899947 MODEL JAAIVD010000003 pseudo 625875207 Nsg1 neuronal vesicle trafficking associated 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); apoptotic process (ortholog); endosomal transport (ortholog); FOUND IN dendrite (ortholog); early endosome (ortholog); early endosome membrane (ortholog) 11 67029277 67051142 + 22301074;30032202 116912789 MODEL JAAIVD010000006;XM_032916951 XP_032772842 neuronal vesicle trafficking-associated protein 1 protein-coding 625875216 Arid1b AT-rich interaction domain 1B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); dendritic cell dendrite assembly (ortholog); dendritic spine development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); blepharophimosis (ortholog); FOUND IN cytosol (ortholog); nBAF complex (ortholog); nucleoplasm (ortholog) 2 193471622 193817118 - 22301074;30032202 116892862 MODEL AJ005202;JAAIVD010000001;XM_032894759 CAC43233;XP_032750650 6A3-5 protein;AT-rich interactive domain-containing protein 1B protein-coding 625875240 Fam43a family with sequence similarity 43 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 4 15528176 15531355 + 116898750 MODEL JAAIVD010000003;XM_032900068 XP_032755959 protein FAM43A protein-coding 625875245 Osbpl1a oxysterol binding protein like 1A ENCODES a protein that exhibits cholesterol binding (ortholog); FOUND IN endosome (ortholog); late endosome (ortholog); organelle membrane contact site (ortholog) 15 30762551 30949460 + 22301074;30032202 116884777 MODEL JAAIVD010000010;XM_032886004;XM_032886005;XM_032886006;XM_032886007 XP_032741895;XP_032741896;XP_032741897;XP_032741898 oxysterol-binding protein-related protein 1 protein-coding 625875284 Cuta cutA divalent cation tolerance homolog ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 18 6864785 6866409 + 22301074;30032202 116887653 MODEL JAAIVD010000013;XM_032889254;XM_032889255;XM_032889256 XP_032745145;XP_032745146;XP_032745147 protein CutA protein-coding 625875303 Rpl8 ribosomal protein L8 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 1 249231651 249234027 + 22301074;30032202 116913452 MODEL JAAIVD010000025;X62145;XM_032917654 CAA44071;XP_032773545 60S ribosomal protein L8 protein-coding 625875313 Cald1 caldesmon 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); positive regulation of protein binding (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Experimental Diabetes Mellitus (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); dendrite (ortholog) 6 104882693 105057953 - 22301074;30032202 116903975 MODEL JAAIVD010000024;XM_032906782 XP_032762673 caldesmon protein-coding 625875331 LOC116896145 geranylgeranyl transferase type-2 subunit beta-like 3 7734898 7737584 + 116896145 MODEL JAAIVD010000012;XR_004387316 pseudo 625875336 Septin5 septin 5 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); negative regulation of regulated secretory pathway (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Polyarteritis Nodosa, Childhood-Onset (ortholog); FOUND IN axon terminus (ortholog); calyx of Held (ortholog); cell cortex (ortholog) 4 3873065 3881305 - 22301074;30032202 116898674 MODEL JAAIVD010000003;XM_032899923;XM_032899924 XP_032755814;XP_032755815 septin-5 protein-coding 625875357 LOC116888293 THO complex subunit 2-like X 108702827 108775064 - 30032202 116888293 MODEL JAAIVD010000014;XM_032889566 XP_032745457 protein-coding 625875383 Col4a6 collagen type IV alpha 6 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Epithelioid Leiomyoma (ortholog); Spontaneous Abortions (ortholog); X-linked deafness 6 (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) X 93845112 93916885 + 22301074;30032202 116888090 MODEL JAAIVD010000014;XM_032889457 XP_032745348 collagen alpha-6(IV) chain protein-coding 625875429 LOC116896047 60S ribosomal protein L7a-like 3 199287133 199290352 + 116896047 MODEL JAAIVD010000012 pseudo 625875430 Faf2 Fas associated factor family member 2 ENCODES a protein that exhibits lipase binding (ortholog); lipase inhibitor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet organization (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 14 72964938 73007868 + 30032202 116883282 MODEL JAAIVD010000009;XM_032884273;XM_032884274 XP_032740164;XP_032740165 FAS-associated factor 2 protein-coding 625875447 Rps24 ribosomal protein S24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); translation initiation factor binding (ortholog); INVOLVED IN erythrocyte homeostasis (ortholog); liver regeneration (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 3 (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 13 654984 659656 + 22301074;2275563;30032202 116914638 MODEL JAAIVD010000008;X51538;XM_032919027;XM_032919028;XM_032919029;XM_032919030;XM_032919032 CAA35918;XP_032774918;XP_032774919;XP_032774920;XP_032774921;XP_032774923 40S ribosomal protein S24 protein-coding 625875465 Mta3 metastasis associated 1 family member 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 9125385 9244426 - 22301074;30032202 116905788 MODEL JAAIVD010000026;XM_032908765 XP_032764656 metastasis-associated protein MTA3 protein-coding 625875487 LOC116905811 acyl-coenzyme A thioesterase 1 7 98092439 98100434 + 22301074;30032202 116905811 MODEL JAAIVD010000026;XM_032908779;XM_032908780;XM_032908781 XP_032764670;XP_032764671;XP_032764672 protein-coding 625875501 LOC116911628 60S ribosomal protein L15-like 10 32392337 32392986 + 116911628 MODEL JAAIVD010000005 pseudo 625875502 Cdh22 cadherin 22 INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog) 5 152726833 152850017 + 22301074;30032202 116902337 MODEL JAAIVD010000023;XM_032904814 XP_032760705 cadherin-22 protein-coding 625875518 Zbtb20 zinc finger and BTB domain containing 20 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); lipid homeostasis (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 4 28271708 28529209 + 22301074;30032202 116898854 MODEL JAAIVD010000003;XM_032900207;XM_032900208;XM_032900209;XM_032900211;XM_032900212;XM_032900213;XM_032900214;XM_032900215;XM_032900216 XP_032756098;XP_032756099;XP_032756100;XP_032756102;XP_032756103;XP_032756104;XP_032756105;XP_032756106;XP_032756107 zinc finger and BTB domain-containing protein 20 protein-coding 625875546 Gpr35 G protein-coupled receptor 35 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); cytoskeleton organization (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 4 164910599 164930881 + 22301074;30032202 116899653 MODEL JAAIVD010000003;XM_032901661 XP_032757552 G-protein coupled receptor 35 protein-coding 625875552 LOC116887709 patr class I histocompatibility antigen, A-2 alpha chain-like 18 9744670 9746801 + 30032202 116887709 MODEL JAAIVD010000013;XM_032889308;XM_032889309 XP_032745199;XP_032745200 protein-coding 625875562 Brat1 BRCA1 associated ATM activator 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 12488236 12499668 - 22301074;30032202 116885554 MODEL JAAIVD010000004;XM_032886846 XP_032742737 BRCA1-associated ATM activator 1 protein-coding 625875579 Zfyve28 zinc finger FYVE-type containing 28 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN negative regulation of epidermal growth factor receptor signaling pathway (ortholog); negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog) 11 77076466 77161727 - 22301074;30032202 116912098 MODEL JAAIVD010000006;XM_032915991;XM_032915992;XR_004389422;XR_004389423 XP_032771882;XP_032771883 lateral signaling target protein 2 homolog protein-coding 625875606 LOC116901472 uncharacterized LOC116901472 5 44921537 45098756 + 116901472 MODEL JAAIVD010000023;XR_004387998 ncrna 625875611 Casc3 CASC3 exon junction complex subunit ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular mRNA localization (ortholog); mRNA splicing, via spliceosome (ortholog); regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN cytoplasm (ortholog); exon-exon junction complex (ortholog); nuclear membrane (ortholog) 9 55605639 55628327 - 22301074;30032202 116908851 MODEL JAAIVD010000002;XM_032912291 XP_032768182 protein CASC3 protein-coding 625875629 LOC116904334 L-lactate dehydrogenase A chain-like 6 65743483 65744488 + 116904334 MODEL JAAIVD010000024 pseudo 625875630 Smim5 small integral membrane protein 5 9 68154859 68160596 - 116909816 MODEL JAAIVD010000002;XM_032913519;XR_004389100 XP_032769410 protein-coding 625875640 LOC116884069 small nucleolar RNA SNORA48 14 41213876 41214016 + 116884069 MODEL JAAIVD010000009;XR_004385817 snorna 625875643 Rpe ribulose-5-phosphate-3-epimerase ENCODES a protein that exhibits carbohydrate binding (ortholog); D-ribulose-phosphate 3-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, non-oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; FOUND IN cytosol (ortholog) 4 140150241 140170085 - 22301074;30032202 116899469 MODEL JAAIVD010000003;XM_032901280;XM_032901281;XM_032901282;XM_032901283;XM_032901284;XM_032901285;XM_032901286;XM_032901287;XM_032901289;XM_032901290;XM_032901291 XP_032757171;XP_032757172;XP_032757173;XP_032757174;XP_032757175;XP_032757176;XP_032757177;XP_032757178;XP_032757180;XP_032757181;XP_032757182 ribulose-phosphate 3-epimerase protein-coding 625875684 Sdr9c7 short chain dehydrogenase/reductase family 9C member 7 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 13 (ortholog); genetic disease (ortholog) 1 206296736 206308406 + 22301074 116910315 MODEL JAAIVD010000025;XM_032914181 XP_032770072 short-chain dehydrogenase/reductase family 9C member 7 protein-coding 625875691 Nrdc nardilysin convertase ENCODES a protein that exhibits endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); positive regulation of axonogenesis (ortholog); positive regulation of membrane protein ectodomain proteolysis (ortholog); FOUND IN mitochondrial matrix (ortholog) 1 45796456 45858337 - 22301074 116899025 MODEL JAAIVD010000025;XM_032900477;XM_032900484 XP_032756368;XP_032756375 nardilysin protein-coding 625875731 Rngtt RNA guanylyltransferase and 5'-phosphatase ENCODES a protein that exhibits inorganic triphosphate phosphatase activity (ortholog); mRNA guanylyltransferase activity (ortholog); RNA guanylyltransferase activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); RNA processing (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway 1 109533141 109728279 - 22301074;30032202 116902294 MODEL JAAIVD010000025;XM_032904734;XM_032904743 XP_032760625;XP_032760634 mRNA-capping enzyme protein-coding 625875754 LOC116899939 U2 spliceosomal RNA 4 52456817 52456996 + 116899939 MODEL JAAIVD010000003 pseudo 625875755 LOC116885857 60S ribosomal protein L28-like 16 4477979 4478482 + 116885857 MODEL JAAIVD010000004 pseudo 625875756 Calr3 calreticulin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) 13 14242602 14267268 - 22301074;30032202 116914297 MODEL JAAIVD010000008;XM_032918539 XP_032774430 calreticulin-3 protein-coding 625875769 LOC116888948 egl nine homolog 1-like X 4021628 4023096 + 116888948 MODEL JAAIVD010000014 pseudo 625875770 LOC116902606 small nucleolar RNA SNORA17 5 24530942 24531086 - 116902606 MODEL JAAIVD010000023 pseudo 625875771 LOC116888047 osteoclast-stimulating factor 1-like X 86821330 86831854 - 116888047 MODEL JAAIVD010000014 pseudo 625875772 LOC116899842 small nucleolar RNA SNORA48 4 92179716 92179856 + 116899842 MODEL JAAIVD010000003;XR_004387839 snorna 625875775 LOC116896301 ADP/ATP translocase 1-like 1 81632791 81633418 - 116896301 MODEL JAAIVD010000025 pseudo 625875776 LOC116889776 von Willebrand factor A domain-containing protein 5B1-like 116889776 MODEL JAAIVD010000185;XM_032890632 XP_032746523 protein-coding 625875777 Stat6 signal transducer and activator of transcription 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to reactive nitrogen species (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-4 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH asthma (ortholog); atopic dermatitis (ortholog); autoimmune disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 206088546 206108072 + 30032202 116910192 MODEL JAAIVD010000025;XM_032914058 XP_032769949 protein-coding 625875803 LOC116895077 small nucleolar RNA SNORA76 2 118714457 118714589 - 116895077 MODEL JAAIVD010000001;XR_004387246 snorna 625875806 CXHXorf38 chromosome X CXorf38 homolog FOUND IN mitochondrion (ortholog) X 8715280 8737463 + 116888991 MODEL JAAIVD010000014;XM_032890209 XP_032746100 uncharacterized protein CXorf38 homolog protein-coding 625875817 Lrrc1 leucine rich repeat containing 1 ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 8 71671964 71790301 - 22301074;30032202 116906614 MODEL JAAIVD010000027;XM_032909372 XP_032765263 leucine-rich repeat-containing protein 1 protein-coding 625875835 Capn2 calpain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blastocyst development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Anthracycline-induced Cardiotoxicity (ortholog); FOUND IN calpain complex (ortholog); cell projection (ortholog); chromatin (ortholog) 10 60756499 60806979 - 22301074;30032202 116911755 MODEL JAAIVD010000005;XM_032915749 XP_032771640 calpain-2 catalytic subunit protein-coding 625875860 Riok3 RIO kinase 3 ENCODES a protein that exhibits caspase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to dsDNA (ortholog); cellular response to dsRNA (ortholog); cellular response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); FOUND IN preribosome, small subunit precursor (ortholog) 15 31498536 31524003 - 22301074;30032202 116884269 MODEL JAAIVD010000010;XM_032885353 XP_032741244 serine/threonine-protein kinase RIO3 protein-coding 625875877 LOC116895204 cytochrome c oxidase assembly protein COX11, mitochondrial-like 3 1664413 1667405 + 116895204 MODEL JAAIVD010000012 pseudo 625875878 LOC116891872 olfactory receptor 14A2-like 2 114404700 114412243 + 116891872 MODEL JAAIVD010000001 pseudo 625875879 LOC116914926 40S ribosomal protein S7-like 13 5557878 5615281 + 116914926 MODEL JAAIVD010000008 pseudo 625875880 LOC116889990 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 1 174951893 174952375 + 116889990 MODEL JAAIVD010000025;XM_032890779 XP_032746670 protein-coding 625875885 Ermap erythroblast membrane associated protein (Scianna blood group) FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 37761189 37771962 + 30032202 116887098 MODEL JAAIVD010000025;XM_032888623;XM_032888633 XP_032744514;XP_032744524 erythroid membrane-associated protein protein-coding 625875901 LOC116902922 hyaluronidase-5-like 6 114470778 114485460 - 22301074;30032202 116902922 MODEL JAAIVD010000024;XM_032905245 XP_032761136 protein-coding 625875906 LOC116915041 beta-defensin 12 13 65009166 65038421 + 22301074 116915041 MODEL JAAIVD010000008;XM_032919445 XP_032775336 protein-coding 625875912 Gna15 G protein subunit alpha 15 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family 1 153366501 153386293 + 22301074;30032202 116904210 MODEL JAAIVD010000025;XM_032907140 XP_032763031 guanine nucleotide-binding protein subunit alpha-15 protein-coding 625875923 LOC116883438 protein PIMREG-like 14 4831924 4832613 + 116883438 MODEL JAAIVD010000009;XM_032884581 XP_032740472 protein-coding 625875926 Nenf neudesin neurotrophic factor ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN negative regulation of appetite (ortholog); positive regulation of MAPK cascade (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); mitochondrion (ortholog) 10 69399017 69405822 - 30032202 116911513 MODEL JAAIVD010000005;XM_032915502 XP_032771393 neudesin protein-coding 625875934 Gnl3l G protein nucleolar 3 like INVOLVED IN negative regulation of protein sumoylation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 12364682 12395931 - 22301074;30032202 116888986 MODEL JAAIVD010000014;XM_032890204 XP_032746095 guanine nucleotide-binding protein-like 3-like protein protein-coding 625875952 LOC116884875 protocadherin gamma-B5-like 15 7190613 7195223 - 22301074 116884875 MODEL JAAIVD010000010;XM_032886121 XP_032742012 protein-coding 625875956 LOC116896460 uncharacterized LOC116896460 3 56454309 56459960 - 116896460 MODEL JAAIVD010000012;XR_004387338 ncrna 625875961 LOC116890632 U2 spliceosomal RNA 1 109076423 109076561 + 116890632 MODEL JAAIVD010000025 pseudo 625875962 Drc1 dynein regulatory complex subunit 1 INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); sperm flagellum (ortholog) 7 23717325 23753095 - 30032202 116906008 MODEL JAAIVD010000026;XM_032909048 XP_032764939 dynein regulatory complex protein 1 protein-coding 625875983 LOC116887634 olfactory receptor 2J1-like 18 11088556 11099959 - 116887634 MODEL JAAIVD010000013 pseudo 625875984 Mkrn1 makorin ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein polyubiquitination (ortholog) 6 100371969 100393192 + 22301074;30032202 116903931 MODEL JAAIVD010000024;XM_032906701;XM_032906702;XM_032906703;XM_032906704 XP_032762592;XP_032762593;XP_032762594;XP_032762595 E3 ubiquitin-protein ligase makorin-1 protein-coding 625876005 Tmem256 transmembrane protein 256 FOUND IN mitochondrion (ortholog) 9 49445066 49446551 + 116908596 MODEL JAAIVD010000002;XM_032911819 XP_032767710 protein-coding 625876013 Swsap1 SWIM-type zinc finger 7 associated protein 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); protein stabilization (ortholog); FOUND IN Shu complex (ortholog) 8 18206026 18208617 + 30032202 116907661 MODEL JAAIVD010000027;XM_032910753;XM_032910754 XP_032766644;XP_032766645 ATPase SWSAP1 protein-coding 625876023 Isca2 iron-sulfur cluster assembly 2 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) 7 98881614 98883185 + 22301074;30032202 116905279 MODEL JAAIVD010000026;XM_032908138 XP_032764029 iron-sulfur cluster assembly 2 homolog, mitochondrial protein-coding 625876031 LOC116889379 60S ribosomal protein L11-like 1 132674011 132674566 + 116889379 MODEL JAAIVD010000025 pseudo 625876032 LOC116902138 putative testis-specific Y-encoded-like protein 3 5 132539275 132542003 - 22301074;30032202 116902138 MODEL JAAIVD010000023;XM_032904466 XP_032760357 protein-coding 625876037 LOC116897442 U6 spliceosomal RNA 3 7606524 7606632 - 116897442 MODEL JAAIVD010000012;XR_004387478 snrna 625876040 Sh3pxd2b SH3 and PX domains 2B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); Animal Disease Models (ortholog); bone development disease (ortholog); FOUND IN cytoplasm (ortholog); podosome (ortholog) 9 5181723 5261997 + 22301074;30032202 116908780 MODEL JAAIVD010000002;XM_032912152 XP_032768043 SH3 and PX domain-containing protein 2B protein-coding 625876057 Crispld1 cysteine rich secretory protein LCCL domain containing 1 INVOLVED IN face morphogenesis (ortholog); hematopoietic stem cell homeostasis (ortholog) 1 151278641 151315955 + 22301074 116889845 MODEL JAAIVD010000025;XM_032890677;XM_032890678 XP_032746568;XP_032746569 cysteine-rich secretory protein LCCL domain-containing 1 protein-coding 625876080 LOC116912568 lymphocyte antigen 6D-like 1 247643010 247644830 - 30032202 116912568 MODEL JAAIVD010000025;XM_032916684 XP_032772575 protein-coding 625876087 LOC116902615 small nucleolar RNA SNORA40 5 138933608 138933731 + 116902615 MODEL JAAIVD010000023;XR_004388194 snorna 625876090 Ddx39a DExD-box helicase 39A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 17 16552819 16561469 - 22301074;30032202 116886186 MODEL JAAIVD010000011;XM_032887556;XM_032887558;XM_032887559 XP_032743447;XP_032743449;XP_032743450 ATP-dependent RNA helicase DDX39A protein-coding 625876112 LOC116898383 protein O-glucosyltransferase 2-like 4 71891033 71892031 + 116898383 MODEL JAAIVD010000003 pseudo 625876113 LOC116889451 U6 spliceosomal RNA X 70605815 70605916 + 116889451 MODEL JAAIVD010000014;XR_004386409 snrna 625876116 Metrnl meteorin like, glial cell differentiation regulator ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); energy homeostasis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); glucose intolerance (ortholog); Insulin Resistance (ortholog); FOUND IN extracellular space (ortholog) 9 62321854 62335766 - 30032202 116909635 MODEL JAAIVD010000002;XM_032913276;XM_032913277 XP_032769167;XP_032769168 meteorin-like protein protein-coding 625876127 Fermt1 FERM domain containing kindlin 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell adhesion (ortholog); establishment of epithelial cell polarity (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Atrophy (ortholog); Erythema (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 5 112609324 112643724 - 22301074;30032202 116902010 MODEL JAAIVD010000023;XM_032904277 XP_032760168 fermitin family homolog 1;fermitin family member 1 protein-coding 625876145 LOC116890902 vacuole membrane protein 1-like 2 8692072 8693587 - 116890902 MODEL JAAIVD010000001;XM_032891523 XP_032747414 protein-coding 625876150 LOC116893380 interferon lambda-2-like 2 167475660 167477231 - 22301074;30032202 116893380 MODEL JAAIVD010000001;XM_032895178 XP_032751069 protein-coding 625876157 Pkd1l3 polycystin 1 like 3, transient receptor potential channel interacting ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); cellular response to acidic pH (ortholog); detection of chemical stimulus involved in sensory perception of sour taste (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cation channel complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) 17 29334718 29394536 + 22301074;30032202 116886055 MODEL JAAIVD010000011;XM_032887359 XP_032743250 polycystic kidney disease protein 1-like 3 protein-coding 625876194 LOC116911562 ferritin light chain 1-like 10 8718001 8721690 - 116911562 MODEL JAAIVD010000005 pseudo 625876195 LOC116888444 ralBP1-associated Eps domain-containing protein 2-like X 22306840 22342871 + 116888444 MODEL JAAIVD010000014;XM_032889719 XP_032745610 protein-coding 625876203 LOC116894569 vomeronasal type-1 receptor 4-like 2 178757205 178758146 - 22301074;30032202 116894569 MODEL JAAIVD010000001;XM_032896285 XP_032752176 protein-coding 625876207 Slc35a2 solute carrier family 35 member A2 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-galactose transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIm (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) X 14240643 14250440 - 22301074;30032202 116888462 MODEL JAAIVD010000014;XM_032889741;XR_004386312 XP_032745632 UDP-galactose translocator protein-coding 625876219 KEG97_t10 tRNA-Cys MT 5179 5246 - 64988243 trna 625876220 LOC116900446 olfactory receptor 4C15-like 5 70939759 70940697 - 22301074 116900446 MODEL JAAIVD010000023;XM_032902187 XP_032758078 protein-coding 625876224 Celsr3 cadherin EGF LAG seven-pass G-type receptor 3 INVOLVED IN axonal fasciculation (ortholog); cilium assembly (ortholog); dopaminergic neuron axon guidance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); CAKUT1 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); presynaptic active zone membrane (ortholog) 8 100157973 100184768 + 22301074 116907622 MODEL JAAIVD010000027;XM_032910678;XM_032910679 XP_032766569;XP_032766570 protein-coding 625876265 LOC116897069 succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial-like 1 35137553 35139546 - 22301074;30032202 116897069 MODEL JAAIVD010000025;XM_032898697 XP_032754588 protein-coding 625876270 LOC116901068 zinc finger protein 431-like 5 142551485 142596256 - 22301074 116901068 MODEL JAAIVD010000023;XM_032902638 XP_032758529 protein-coding 625876275 LOC116900393 olfactory receptor 5D13-like 5 69814319 69815266 + 22301074;30032202 116900393 MODEL JAAIVD010000023;XM_032902138 XP_032758029 protein-coding 625876278 LOC116889040 protein FAM104A-like X 20111774 20138958 - 116889040 MODEL JAAIVD010000014 pseudo 625876279 Myf5 myogenic factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cartilage condensation (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH OPHTHALMOPLEGIA, EXTERNAL, WITH RIB AND VERTEBRAL ANOMALIES (ortholog); scoliosis (ortholog); FOUND IN nucleoplasm (ortholog) 1 185758506 185761691 - 22301074;30032202 116890007 MODEL JAAIVD010000025;XM_032890792 XP_032746683 protein-coding 625876286 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60834939 60835012 + 116897665 MODEL JAAIVD010000012 trna 625876287 LOC116894874 U6 spliceosomal RNA 2 168237174 168237283 + 116894874 MODEL JAAIVD010000001;XR_004387086 snrna 625876290 LOC116885419 CD209 antigen-like protein B 16 1768294 1776779 - 116885419 MODEL JAAIVD010000004;XM_032886706 XP_032742597 protein-coding 625876302 LOC116910741 small nucleolar RNA SNORD124 9 55725053 55725156 + 116910741 MODEL JAAIVD010000002;XR_004389254 snorna 625876305 LOC116888855 uncharacterized LOC116888855 X 97845090 97951002 + 116888855 MODEL JAAIVD010000014;XR_004386346 ncrna 625876311 Tnfsf11 TNF superfamily member 11 ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); bone resorption (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 2 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) 12 46102801 46132348 + 22301074 116913970 MODEL JAAIVD010000007;XM_032918238;XM_032918239 XP_032774129;XP_032774130 tumor necrosis factor ligand superfamily member 11 protein-coding 625876321 LOC116902813 vomeronasal type-1 receptor 100-like 6 83949474 83950373 - 22301074;30032202 116902813 MODEL JAAIVD010000024;XM_032905145 XP_032761036 protein-coding 625876324 Macrod2 mono-ADP ribosylhydrolase 2 ENCODES a protein that exhibits ADP-ribosylglutamate hydrolase activity (ortholog); deacetylase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN brain development (ortholog); DNA damage response (ortholog); peptidyl-glutamate ADP-deribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Liver Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 119664165 121873709 + 30032202 116901013 MODEL JAAIVD010000023;XM_032902613 XP_032758504 ADP-ribose glycohydrolase MACROD2 protein-coding 625876348 LOC116883606 isopentenyl-diphosphate delta-isomerase 2-like 14 12533 14969 - 22301074;30032202 116883606 MODEL JAAIVD010000009;XM_032884791 XP_032740682 protein-coding 625876354 Stk32c serine/threonine kinase 32C 2 62660909 62741288 + 22301074;30032202 116891365 MODEL JAAIVD010000001;XM_032892362 XP_032748253 serine/threonine-protein kinase 32C protein-coding 625876370 Svopl SVOP like ASSOCIATED WITH Hydrops Fetalis (ortholog) 6 101769788 101818947 + 22301074 116904414 MODEL JAAIVD010000024;XM_032907259 XP_032763150 putative transporter SVOPL protein-coding 625876387 Ranbp2 RAN binding protein 2 ENCODES a protein that exhibits kinase activator activity (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN centrosome localization (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); intracellular glucose homeostasis (ortholog); PARTICIPATES IN CRM1 export pathway; mitochondria transport pathway; ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); genetic disease (ortholog); glucose metabolism disease (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasmic periphery of the nuclear pore complex (ortholog); cytosol (ortholog) 18 24602895 24652758 + 22301074;30032202 116886908 MODEL JAAIVD010000013;XM_032888374 XP_032744265 E3 SUMO-protein ligase RanBP2 protein-coding 625876420 LOC116907169 40S ribosomal protein S27-like 8 110883320 110885848 + 22301074;30032202 116907169 MODEL JAAIVD010000027;XM_032910124 XP_032766015 protein-coding 625876424 LOC116907256 uncharacterized LOC116907256 8 92550139 92554109 + 116907256 MODEL JAAIVD010000027;XR_004388816 ncrna 625876429 LOC116909904 tryptase beta-2 9 2629650 2631431 + 22301074 116909904 MODEL JAAIVD010000002;XM_032913655 XP_032769546 protein-coding 625876439 LOC116895918 TD and POZ domain-containing protein 2-like 3 120914225 120915348 - 30032202 116895918 MODEL JAAIVD010000012;XM_032896993 XP_032752884 protein-coding 625876443 Odf1 outer dense fiber of sperm tails 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN manchette (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) 1 211676419 211684023 + 30032202 116910777 MODEL JAAIVD010000025;XM_032914588 XP_032770479 outer dense fiber protein 1 protein-coding 625876448 Rlig1 RNA 5'-phosphate and 3'-OH ligase 1 ENCODES a protein that exhibits RNA ligase (ATP) activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to reactive oxygen species (ortholog); ASSOCIATED WITH Joubert syndrome 1 (ortholog) 1 178907093 178918637 - 22301074;30032202 116908594 MODEL JAAIVD010000025;XM_032911818;XM_032911825;XM_032911832 XP_032767709;XP_032767716;XP_032767723 C1H12orf29 chromosome 1 C12orf29 homolog;uncharacterized protein C12orf29 homolog protein-coding 625876467 LOC116889540 small nucleolar RNA SNORA26 X 15692478 15692601 - 116889540 MODEL JAAIVD010000014;XR_004386475 snorna 625876470 Bpifb4 BPI fold containing family B member 4 FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog) 5 133273375 133298673 + 1915264;22301074 116900713 MODEL JAAIVD010000023;X60660;XM_032902419 CAA43067;XP_032758310 RY2G5 BPI fold-containing family B member 4;potential ligand-binding protein protein-coding 625876489 Tra2a transformer 2 alpha homolog ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 91716404 91734510 + 22301074;30032202 116903835 MODEL JAAIVD010000024;XM_032906546;XM_032906547;XM_032906548;XM_032906549;XM_032906551;XM_032906552 XP_032762437;XP_032762438;XP_032762439;XP_032762440;XP_032762442;XP_032762443 transformer-2 protein homolog alpha protein-coding 625876516 Ptch1 patched 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cyclin binding (ortholog); hedgehog family protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); anterior segment dysgenesis 5 (ortholog); Axenfeld-Rieger syndrome (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); caveola (ortholog) 14 75965435 76029418 + 22301074;30032202 116883163 MODEL JAAIVD010000009;XM_032884188;XM_032884189;XM_032884190;XM_032884192 XP_032740079;XP_032740080;XP_032740081;XP_032740083 protein patched homolog 1 protein-coding 625876553 Parvb parvin beta INVOLVED IN actin cytoskeleton organization (ortholog); cell projection assembly (ortholog); establishment or maintenance of cell polarity regulating cell shape (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 1 253623124 253705085 + 22301074;30032202 116914529 MODEL JAAIVD010000025;XM_032918861 XP_032774752 beta-parvin protein-coding 625876570 LOC116898111 protein phosphatase 1 regulatory subunit 14B-like 4 100470283 100471915 - 22301074;30032202 116898111 MODEL JAAIVD010000003;XM_032899496 XP_032755387 protein-coding 625876575 Lin28a lin-28 RNA binding posttranscriptional regulator A ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); miRNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); germ cell development (ortholog); miRNA catabolic process (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Neoplasm Invasiveness (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 1 24222209 24235392 + 22301074 116886809 MODEL JAAIVD010000025;XM_032888240 XP_032744131 lin-28 homolog A;protein lin-28 homolog A protein-coding 625876583 LOC116887949 zinc finger protein 532-like X 63596704 63603237 + 116887949 MODEL JAAIVD010000014 pseudo 625876584 LOC116900086 eukaryotic translation initiation factor 4E-like 5 11292260 11292921 - 116900086 MODEL JAAIVD010000023 pseudo 625876585 LOC116914345 40S ribosomal protein S17-like 13 52951679 52974109 - 116914345 MODEL JAAIVD010000008 pseudo 625876586 Map2 microtubule associated protein 2 ENCODES a protein that exhibits actin binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN axonogenesis (ortholog); central nervous system neuron development (ortholog); dendrite development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); arteriovenous malformation (ortholog); asphyxia neonatorum (ortholog); FOUND IN actin cytoskeleton (ortholog); apical dendrite (ortholog); apical distal dendrite (ortholog) 4 140382053 140640979 - 30032202 116899471 Q63724 MODEL JAAIVD010000003;X53455;XM_032901293 CAA37535;XP_032757184 microtubule-associated protein 2 protein-coding 625876605 LOC116904710 small nucleolar RNA SNORA17 6 72253129 72253260 - 116904710 MODEL JAAIVD010000024;XR_004388405 snorna 625876608 Znf326 zinc finger protein 326 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II complex binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription elongation (ortholog); regulation of RNA splicing (ortholog); FOUND IN DBIRD complex (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) 11 15583784 15622845 + 22301074;30032202 116912682 MODEL JAAIVD010000006;XM_032916819 XP_032772710 DBIRD complex subunit ZNF326 protein-coding 625876625 Sag S-antigen visual arrestin ENCODES a protein that exhibits opsin binding (ortholog); phosphoprotein binding (ortholog); spectrin binding (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH cone dystrophy (ortholog); congenital stationary night blindness (ortholog); fundus dystrophy (ortholog); FOUND IN photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 4 159919549 159957850 + 22301074;30032202 116899612 MODEL JAAIVD010000003;XM_032901571 XP_032757462 S-arrestin protein-coding 625876644 LOC116886650 histone H3.3A-like 17 22562548 22574611 - 116886650 MODEL JAAIVD010000011 pseudo 625876645 LOC116900574 transcriptional repressor NF-X1-like 1 117152272 117162932 - 30032202 116900574 MODEL JAAIVD010000025;XM_032902324 XP_032758215 protein-coding 625876655 LOC116902804 putative vomeronasal receptor-like protein 4 6 83728924 83729862 - 116902804 MODEL JAAIVD010000024 pseudo 625876656 Elavl1 ELAV like RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lncRNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell population proliferation (ortholog); lncRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH degenerative disc disease (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoplasmic vesicle (ortholog) 16 2420527 2464406 - 22301074 116885940 MODEL JAAIVD010000004;XM_032887253 XP_032743144 ELAV-like protein 1 protein-coding 625876666 LOC116897411 U6 spliceosomal RNA 3 74193725 74193831 - 116897411 MODEL JAAIVD010000012;XR_004387453 snrna 625876669 Bdkrb2 bradykinin receptor B2 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); bradykinin receptor activity (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); arachidonate secretion (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); asthma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 7 123225047 123254809 + 22301074;30032202 116905891 MODEL JAAIVD010000026;XM_032908877;XM_032908879 XP_032764768;XP_032764770 B2 bradykinin receptor protein-coding 625876680 Smim3 small integral membrane protein 3 ENCODES a protein that exhibits identical protein binding (ortholog) 15 71466608 71467983 + 116884742 MODEL JAAIVD010000010;XM_032885960 XP_032741851 protein-coding 625876685 LOC116913699 olfactory receptor 11G2-like 12 72727451 72728419 - 22301074 116913699 MODEL JAAIVD010000007;XM_032917995 XP_032773886 protein-coding 625876689 LOC116886737 small nucleolar RNA SNORA17 17 22314059 22314186 - 116886737 MODEL JAAIVD010000011;XR_004386145 snorna 625876692 Flnc filamin C ENCODES a protein that exhibits ankyrin binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN muscle cell development (ortholog); sarcomere organization (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); cardiovascular system disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 6 110105242 110132893 - 30032202 116904017 MODEL JAAIVD010000024;XM_032906837 XP_032762728 filamin-C protein-coding 625876743 Ms4a12 membrane spanning 4-domains A12 2 10693802 10705633 - 30032202 116890979 MODEL JAAIVD010000001;XM_032891645;XM_032891646 XP_032747536;XP_032747537 membrane-spanning 4-domains subfamily A member 12 protein-coding 625876757 LOC116898372 histone deacetylase 1-like 4 63813725 63835079 - 116898372 MODEL JAAIVD010000003 pseudo 625876758 Igsf6 immunoglobulin superfamily member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) 2 80722547 80733670 + 116891573 MODEL JAAIVD010000001;XM_032892753 XP_032748644 protein-coding 625876768 LOC116910635 U6 spliceosomal RNA 9 68498803 68498912 - 116910635 MODEL JAAIVD010000002;XR_004389173 snrna 625876771 Phc1 polyhomeotic homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to retinoic acid (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); intellectual disability (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 24767731 24790120 + 22301074;30032202 116903312 MODEL JAAIVD010000024;XM_032905741;XM_032905742;XM_032905743;XM_032905744;XM_032905746 XP_032761632;XP_032761633;XP_032761634;XP_032761635;XP_032761637 polyhomeotic-like protein 1 protein-coding 625876802 LOC116887051 CD99 antigen-like 18 49355163 49358983 + 30032202 116887051 MODEL JAAIVD010000013;XM_032888542 XP_032744433 protein-coding 625876813 LOC116913230 signal peptidase complex subunit 1-like 12 71474318 71477306 - 116913230 MODEL JAAIVD010000007 pseudo 625876814 Zbtb43 zinc finger and BTB domain containing 43 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 2176304 2191932 + 22301074;30032202 116901119 MODEL JAAIVD010000023;XM_032902693;XM_032902694;XM_032902695 XP_032758584;XP_032758585;XP_032758586 zinc finger and BTB domain-containing protein 43 protein-coding 625876826 Acsl4 acyl-CoA synthetase long chain family member 4 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); dendritic spine development (ortholog); embryonic process involved in female pregnancy (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); depressive disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) X 94428295 94491757 - 30032202 116889314 MODEL JAAIVD010000014;XM_032890436;XM_032890437;XM_032890438;XM_032890439;XM_032890440 XP_032746327;XP_032746328;XP_032746329;XP_032746330;XP_032746331 long-chain-fatty-acid--CoA ligase 4 protein-coding 625876855 LOC116894224 trace amine-associated receptor 7h 2 106822906 106823982 - 22301074;30032202 116894224 MODEL JAAIVD010000001;XM_032895935 XP_032751826 protein-coding 625876858 LOC116899820 small nucleolar RNA SNORA13 4 5112514 5112648 + 116899820 MODEL JAAIVD010000003;XR_004387820 snorna 625876861 LOC116910732 small Cajal body-specific RNA 21 9 48960427 48960566 - 116910732 MODEL JAAIVD010000002;XR_004389250 ncrna 625876864 LOC116889303 histone H3.3A-like X 33245080 33245490 + 116889303 MODEL JAAIVD010000014 pseudo 625876865 C7H3orf38 chromosome 7 C3orf38 homolog INVOLVED IN positive regulation of apoptotic process (ortholog); FOUND IN nucleus (ortholog) 7 109663351 109668143 + 116905341 MODEL JAAIVD010000026;XM_032908239 XP_032764130 uncharacterized protein C3orf38 homolog protein-coding 625876872 LOC116911255 low affinity immunoglobulin gamma Fc region receptor II 10 50141612 50156055 - 30032202 116911255 MODEL JAAIVD010000005;XM_032915155;XM_032915156 XP_032771046;XP_032771047 protein-coding 625876885 LOC116898659 protein DGCR6 4 3322996 3328069 + 116898659 MODEL JAAIVD010000003;XM_032899893;XM_032899894 XP_032755784;XP_032755785 protein-coding 625876896 Myt1l myelin transcription factor 1 like ENCODES a protein that exhibits cobalt ion binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); neuron development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 39 (ortholog); FOUND IN nucleus (ortholog) 7 43067788 43359030 + 22301074;30032202 116904936 MODEL JAAIVD010000026;XM_032907568;XM_032907569;XM_032907570;XM_032907571;XM_032907572;XM_032907573;XM_032907574;XM_032907575;XM_032907576;XM_032907577 XP_032763459;XP_032763460;XP_032763461;XP_032763462;XP_032763463;XP_032763464;XP_032763465;XP_032763466;XP_032763467;XP_032763468 myelin transcription factor 1-like protein protein-coding 625876942 Prex1 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); neutrophil chemotaxis (ortholog); positive regulation of cell adhesion (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Lymphatic Metastasis (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); dendritic shaft (ortholog); growth cone (ortholog) 5 151249232 151400100 + 22301074 116902325 MODEL JAAIVD010000023;XM_032904775 XP_032760666 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 1 protein protein-coding 625876986 LOC116897013 uncharacterized LOC116897013 3 136988574 136995411 + 116897013 MODEL JAAIVD010000012;XR_004387389 ncrna 625876990 LOC116894440 major allergen I polypeptide chain 1-like 2 164593402 164594703 - 30032202 116894440 MODEL JAAIVD010000001;XM_032896143 XP_032752034 protein-coding 625876997 LOC116885354 putative fidgetin-like protein 2 16 3215332 3217081 + 116885354 MODEL JAAIVD010000004 pseudo 625876998 Gpr161 G protein-coupled receptor 161 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of smoothened signaling pathway involved in dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); medulloblastoma (ortholog); Pituitary Stalk Interruption Syndrome (ortholog); FOUND IN cilium (ortholog); glial cell projection (ortholog); neuron projection (ortholog) 10 44427179 44468895 + 22301074;30032202 116911220 MODEL JAAIVD010000005;XM_032915113;XM_032915114;XM_032915115 XP_032771004;XP_032771005;XP_032771006 G-protein coupled receptor 161 protein-coding 625877014 Obi1 ORC ubiquitin ligase 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); protein autoubiquitination (ortholog); protein monoubiquitination (ortholog); FOUND IN chromatin (ortholog) 12 20292880 20329880 + 30032202 116913603 MODEL JAAIVD010000007;XM_032917853 XP_032773744 protein-coding 625877024 LOC116910194 transcription initiation factor TFIID subunit 11-like 9 81828165 81830032 + 22301074;30032202 116910194 MODEL JAAIVD010000002;XM_032914056 XP_032769947 protein-coding 625877029 LOC116908268 solute carrier family 5 member 4A-like 8 107066700 107164323 + 22301074;30032202 116908268 MODEL JAAIVD010000027;XM_032911517 XP_032767408 protein-coding 625877040 Rims1 regulating synaptic membrane exocytosis 1 ENCODES a protein that exhibits protein kinase binding (ortholog); SH3 domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN extrinsic component of presynaptic active zone membrane (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 4 99593141 100090913 - 22301074;30032202 116899251 MODEL JAAIVD010000003;XM_032900856 XP_032756747 regulating synaptic membrane exocytosis protein 1 protein-coding 625877078 LOC116908389 small nucleolar RNA SNORA48 8 48015486 48015626 + 116908389 MODEL JAAIVD010000027;XR_004388934 snorna 625877081 Galnt2 polypeptide N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); obsolete protein O-linked glycosylation via threonine (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIt (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi stack (ortholog); perinuclear region of cytoplasm (ortholog) 17 43767450 43879881 + 30032202 116886086 MODEL JAAIVD010000011;XM_032887406 XP_032743297 protein-coding 625877101 Fsaf1 40S small subunit processome assembly factor 1 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); small-subunit processome (ortholog) 17 44362077 44375325 - 116886027 MODEL JAAIVD010000011;XM_032887319 XP_032743210 C17H1orf131 chromosome 17 C1orf131 homolog;uncharacterized protein C1orf131 homolog protein-coding 625877112 LOC116914247 uncharacterized LOC116914247 13 64897672 64900166 + 116914247 MODEL JAAIVD010000008;XR_004389738 ncrna 625877118 LOC116908493 uncharacterized LOC116908493 9 83204996 83207271 - 116908493 MODEL JAAIVD010000002;XR_004388988 ncrna 625877123 Sox11 SRY-box transcription factor 11 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN closure of optic fissure (ortholog); cornea development in camera-type eye (ortholog); embryonic digestive tract morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 9 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 7 40872669 40881013 - 30032202 116904925 MODEL JAAIVD010000026;XM_032907554 XP_032763445 transcription factor SOX-11 protein-coding 625877128 LOC116911929 sentrin-specific protease 2-like 11 46347777 46349204 + 30032202 116911929 MODEL JAAIVD010000006;XM_032915820 XP_032771711 protein-coding 625877131 Samd9l sterile alpha motif domain containing 9 like INVOLVED IN common myeloid progenitor cell proliferation (ortholog); endosomal vesicle fusion (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN early endosome (ortholog); mitochondrion (ortholog) 6 135197616 135207009 + 22301074;30032202 116904108 MODEL JAAIVD010000024;XM_032906984 XP_032762875 sterile alpha motif domain-containing protein 9-like protein-coding 625877137 LOC116894765 cytochrome c, somatic-like 2 198672232 198672588 + 22301074;30032202 116894765 MODEL JAAIVD010000001;XM_032896427 XP_032752318 protein-coding 625877140 LOC116899020 keratin-associated protein 13-1-like 4 55111183 55111781 - 116899020 MODEL JAAIVD010000003;XM_032900468 XP_032756359 protein-coding 625877145 LOC116908271 40S ribosomal protein S15-like 8 111726448 111726882 - 116908271 MODEL JAAIVD010000027 pseudo 625877146 LOC116897846 ferritin light chain 1-like 4 15003092 15003661 - 116897846 MODEL JAAIVD010000003 pseudo 625877147 Trim50 tripartite motif containing 50 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of establishment of protein localization (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog) 16 18642567 18659498 - 22301074 116885617 MODEL JAAIVD010000004;XM_032886916;XM_032886917 XP_032742807;XP_032742808 E3 ubiquitin-protein ligase TRIM50 protein-coding 625877163 LOC116901540 tetratricopeptide repeat protein 30B 5 53285503 53288257 - 22301074;30032202 116901540 MODEL JAAIVD010000023;XM_032903524 XP_032759415 protein-coding 625877168 Cntfr ciliary neurotrophic factor receptor ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); cytokine binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN brainstem development (ortholog); ciliary neurotrophic factor-mediated signaling pathway (ortholog); negative regulation of motor neuron apoptotic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN apical plasma membrane (ortholog); ciliary neurotrophic factor receptor complex (ortholog); CNTFR-CLCF1 complex (ortholog) 1 3867675 3893847 + 22301074;30032202 116891327 MODEL JAAIVD010000025;XM_032892260 XP_032748151 ciliary neurotrophic factor receptor subunit alpha protein-coding 625877181 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31457175 31457256 - 116910830 MODEL JAAIVD010000002 trna 625877182 LOC116912117 uncharacterized LOC116912117 11 96758958 96789941 - 116912117 MODEL JAAIVD010000006;XR_004389424;XR_004389425 ncrna 625877191 Nkiras2 NFKB inhibitor interacting Ras like 2 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); lung alveolus development (ortholog); Ral protein signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 9 59922553 59926699 + 22301074;30032202 116909422 MODEL JAAIVD010000002;XM_032912997 XP_032768888 NF-kappa-B inhibitor-interacting Ras-like protein 2 protein-coding 625877199 LOC116898563 odorant receptor 131-2-like 4 157669196 157670086 + 22301074 116898563 MODEL JAAIVD010000003;XM_032899770 XP_032755661 protein-coding 625877202 LOC116884939 elongation factor 2-like 15 22216612 22257617 + 116884939 MODEL JAAIVD010000010 pseudo 625877203 LOC116913786 eosinophil cationic protein-like 12 72048819 72049678 + 22301074;30032202 116913786 MODEL JAAIVD010000007;XM_032918092 XP_032773983 protein-coding 625877209 Sri sorcin ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); heart development (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromaffin granule membrane (ortholog) 6 140049228 140060012 + 22301074 116904136 MODEL JAAIVD010000024;XM_032907026 XP_032762917 protein-coding 625877219 Septin12 septin 12 ENCODES a protein that exhibits GTP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH spermatogenic failure 10 (ortholog); FOUND IN microtubule cytoskeleton (ortholog); midbody (ortholog); perinuclear region of cytoplasm (ortholog) 9 16908290 16918494 + 22301074;30032202 116909187 MODEL JAAIVD010000002;XM_032912678;XM_032912679 XP_032768569;XP_032768570 septin-12 protein-coding 625877236 Itgb4 integrin subunit beta 4 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); insulin-like growth factor I binding (ortholog); neuregulin binding (ortholog); INVOLVED IN autophagy (ortholog); cell adhesion (ortholog); cell motility (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Congenital Myopathy with Neuropathy and Deafness (ortholog); ectodermal dysplasia (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); cell cortex (ortholog) 9 68051638 68087645 - 22301074;30032202 116908739 MODEL JAAIVD010000002;XM_032912086 XP_032767977 integrin beta-4 protein-coding 625877280 LOC116894145 olfactory receptor 2AG1-like 2 104153187 104154137 + 22301074 116894145 MODEL JAAIVD010000001;XM_032895862 XP_032751753 protein-coding 625877283 Tsc2 TSC complex subunit 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); GTPase activator activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN anoikis (ortholog); cell projection organization (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN mitogen activated protein kinase signaling pathway; mTOR signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell projection (ortholog); cytoplasm (ortholog) 9 1879761 1914129 - 22301074;30032202 116909159 MODEL JAAIVD010000002;XM_032912646 XP_032768537 tuberin protein-coding 625877329 LOC116896554 histone-lysine N-methyltransferase SETDB1-like 3 61832789 61838098 - 30032202 116896554 MODEL JAAIVD010000012;XM_032897745;XM_032897746 XP_032753636;XP_032753637 protein-coding 625877345 LOC116894026 putative olfactory receptor 52P1 2 102024408 102025361 + 22301074 116894026 MODEL JAAIVD010000001;XM_032895742 XP_032751633 protein-coding 625877348 LOC116893324 uncharacterized LOC116893324 2 154089388 154091308 - 116893324 MODEL JAAIVD010000001;XM_032895142 XP_032751033 uncharacterized protein LOC116893324 protein-coding 625877355 Itga6 integrin subunit alpha 6 ENCODES a protein that exhibits insulin-like growth factor I binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell adhesion mediated by integrin (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH epidermolysis bullosa (ortholog); genetic disease (ortholog); junctional epidermolysis bullosa (ortholog); FOUND IN adherens junction (ortholog); basal part of cell (ortholog); basal plasma membrane (ortholog) 5 49081813 49154347 + 22301074;30032202 116901509 MODEL JAAIVD010000023;XM_032903479;XM_032903480 XP_032759370;XP_032759371 integrin alpha-6 protein-coding 625877387 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41358377 41358482 - 116884152 MODEL JAAIVD010000009 trna 625877388 LOC116900593 H/ACA ribonucleoprotein complex subunit 3-like 5 60785833 60786978 + 22301074;30032202 116900593 MODEL JAAIVD010000023;XM_032902309 XP_032758200 protein-coding 625877393 Tmem61 transmembrane protein 61 1 48315011 48320634 + 116890933 MODEL JAAIVD010000025;XM_032891615 XP_032747506 protein-coding 625877398 LOC116902780 putative vomeronasal receptor-like protein 4 6 76377697 76378554 - 22301074;30032202 116902780 MODEL JAAIVD010000024;XM_032905122 XP_032761013 protein-coding 625877401 Zic4 Zic family zinc finger 4 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 8 83108373 83129837 + 30032202 116906916 MODEL JAAIVD010000027;XM_032909836;XM_032909837;XM_032909838;XM_032909840;XM_032909841 XP_032765727;XP_032765728;XP_032765729;XP_032765731;XP_032765732 Zic family member 4;zinc finger protein ZIC 4 protein-coding 625877425 LOC116911571 glyceraldehyde-3-phosphate dehydrogenase-like 10 11735466 11736464 + 116911571 MODEL JAAIVD010000005 pseudo 625877426 LOC116885597 phosphoglycerate mutase 1-like 16 38355825 38356597 - 116885597 MODEL JAAIVD010000004 pseudo 625877427 Rnpepl1 arginyl aminopeptidase like 1 ENCODES a protein that exhibits metalloaminopeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 4 164871106 164880657 + 22301074;30032202 116899649 MODEL JAAIVD010000003;XM_032901658 XP_032757549 aminopeptidase RNPEPL1 protein-coding 625877442 Dgat2l6 diacylglycerol O-acyltransferase 2 like 6 ENCODES a protein that exhibits diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog) X 58273952 58297105 + 22301074;30032202 116889362 MODEL JAAIVD010000014;XM_032890469 XP_032746360 diacylglycerol O-acyltransferase 2-like protein 6 protein-coding 625877453 LOC116908266 translation initiation factor IF-2-like 8 101683087 101703718 - 116908266 MODEL JAAIVD010000027;XM_032911516 XP_032767407 protein-coding 625877459 LOC116894085 olfactory receptor 52A1-like 2 103215053 103216012 + 22301074 116894085 MODEL JAAIVD010000001;XM_032895806 XP_032751697 protein-coding 625877462 Gngt1 G protein subunit gamma transducin 1 INVOLVED IN cardiac muscle cell apoptotic process (ortholog); cellular response to hypoxia (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); prostate cancer (ortholog); FOUND IN heterotrimeric G-protein complex (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 6 134616316 134619416 - 22301074;30032202 116902983 MODEL JAAIVD010000024;XM_032905302 XP_032761193 guanine nucleotide-binding protein G(T) subunit gamma-T1 protein-coding 625877469 LOC116914163 U4 spliceosomal RNA 12 66637582 66637665 + 116914163 MODEL JAAIVD010000007 pseudo 625877470 LOC116906952 olfactory receptor 143-like 8 32084237 32085178 + 22301074;30032202 116906952 MODEL JAAIVD010000027;XM_032909873 XP_032765764 protein-coding 625877473 LOC116885909 leucine-rich repeat and WD repeat-containing protein 1-like 16 17877621 17887803 + 22301074;30032202 116885909 MODEL JAAIVD010000004;XM_032887225 XP_032743116 protein-coding 625877488 LOC116904980 alkylglycerol monooxygenase-like 7 50521821 50538795 + 30032202 116904980 MODEL JAAIVD010000026;XM_032907660 XP_032763551 protein-coding 625877495 Hnrnpll heterogeneous nuclear ribonucleoprotein L like ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of RNA splicing (ortholog); FOUND IN synapse (ortholog) 7 13010521 13041335 + 22301074;30032202 116905859 MODEL JAAIVD010000026;XM_032908841 XP_032764732 heterogeneous nuclear ribonucleoprotein L-like protein-coding 625877512 LOC116906915 zinc finger protein 883-like 1 157533789 157553282 - 30032202 116906915 MODEL JAAIVD010000025;XM_032909839 XP_032765730 protein-coding 625877520 Tedc1 tubulin epsilon and delta complex 1 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) 7 130759686 130766852 + 116905529 MODEL JAAIVD010000026;XM_032908566 XP_032764457 tubulin epsilon and delta complex protein 1 protein-coding 625877532 LOC116897894 zinc finger CCHC domain-containing protein 10-like 4 32512987 32513600 + 22301074 116897894 MODEL JAAIVD010000003;XM_032899299;XM_032899300 XP_032755190;XP_032755191 protein-coding 625877539 Pole3 DNA polymerase epsilon 3, accessory subunit INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); pericentric heterochromatin (ortholog) 1 91008731 91012038 + 22301074;30032202 116901355 MODEL JAAIVD010000025;XM_032903208 XP_032759099 DNA polymerase epsilon subunit 3 protein-coding 625877547 Hddc3 HD domain containing 3 2 119902818 119904420 - 30032202 116891919 MODEL JAAIVD010000001;XM_032893344;XM_032893346 XP_032749235;XP_032749237 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1 protein-coding 625877558 Ttpa alpha tocopherol transfer protein ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN embryonic placenta development (ortholog); intermembrane lipid transfer (ortholog); intracellular pH reduction (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Animal Disease Models (ortholog); Ataxia (ortholog); FOUND IN late endosome (ortholog) 1 122998219 123019357 - 30032202 116903010 MODEL JAAIVD010000025;XM_032905324;XM_032905332 XP_032761215;XP_032761223 alpha-tocopherol transfer protein protein-coding 625877571 Nemp1 nuclear envelope integral membrane protein 1 INVOLVED IN erythrocyte enucleation (ortholog); erythrocyte maturation (ortholog); nuclear membrane organization (ortholog); FOUND IN nuclear envelope (ortholog) 1 206124303 206149091 + 30032202 116910210 MODEL JAAIVD010000025;XM_032914091;XM_032914104;XM_032914110;XR_004389143 XP_032769982;XP_032769995;XP_032770001 protein-coding 625877593 LOC116909049 small nuclear ribonucleoprotein G-like 9 42845686 42846316 + 116909049 MODEL JAAIVD010000002 pseudo 625877594 Zfp28 ZFP28 zinc finger protein 2 179729414 179741684 - 30032202 116892720 MODEL JAAIVD010000001;XM_032894587 XP_032750478 zinc finger protein 28 homolog protein-coding 625877605 Plk5 polo like kinase 5 (inactive) ENCODES a protein that exhibits kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); defense response to tumor cell (ortholog); DNA damage response (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 1 154518338 154526122 - 22301074;30032202 116905118 MODEL JAAIVD010000025;XM_032907862;XM_032907870;XM_032907877;XM_032907887;XM_032907896;XR_004388492 XP_032763753;XP_032763761;XP_032763768;XP_032763778;XP_032763787 inactive serine/threonine-protein kinase PLK5 protein-coding 625877634 Sptbn1 spectrin beta, non-erythrocytic 1 ENCODES a protein that exhibits ankyrin binding (ortholog); GTPase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); central nervous system development (ortholog); central nervous system formation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); Bone Fractures (ortholog); DEVELOPMENTAL DELAY, IMPAIRED SPEECH, AND BEHAVIORAL ABNORMALITIES (ortholog); FOUND IN axolemma (ortholog); cortical cytoskeleton (ortholog); cuticular plate (ortholog) 11 97674860 97847142 - 22301074;30032202 116912875 MODEL JAAIVD010000006;XM_032917109;XM_032917110;XM_032917111 XP_032773000;XP_032773001;XP_032773002 spectrin beta chain, non-erythrocytic 1 protein-coding 625877680 Csnk1g3 casein kinase 1 gamma 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway 15 77824532 77911435 - 22301074;30032202 116884952 MODEL JAAIVD010000010;XM_032886156 XP_032742047 casein kinase I protein-coding 625877698 LOC116898785 cytochrome P450 4X1 1 41439285 41468387 + 22301074 116898785 MODEL JAAIVD010000025;XM_032900128 XP_032756019 protein-coding 625877714 LOC116885738 uncharacterized LOC116885738 16 15646362 15648886 - 116885738 MODEL JAAIVD010000004;XR_004386039 ncrna 625877719 LOC116894215 olfactory receptor 510 2 106578934 106579878 + 22301074;30032202 116894215 MODEL JAAIVD010000001;XM_032895928 XP_032751819 protein-coding 625877722 LOC116907288 phosphatidylinositol-glycan biosynthesis class X protein-like 8 17783168 17787055 + 116907288 MODEL JAAIVD010000027 pseudo 625877723 LOC116887827 nucleoside diphosphate kinase A-like X 36119079 36142560 + 116887827 MODEL JAAIVD010000014 pseudo 625877724 Polr2b RNA polymerase II subunit B ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); RNA-directed RNA polymerase activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 34068837 34106227 + 22301074;30032202 116912128 MODEL JAAIVD010000006;XM_032916037 XP_032771928 DNA-directed RNA polymerase II subunit RPB2 protein-coding 625877753 LOC116893365 androgen-binding protein homolog 2 164602606 164604385 + 22301074;30032202 116893365 MODEL JAAIVD010000001;XM_032895167 XP_032751058 protein-coding 625877758 LOC116912122 protein transport protein Sec61 subunit gamma-like 11 4865705 4866344 - 116912122 MODEL JAAIVD010000006 pseudo 625877759 Znf292 zinc finger protein 292 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 64 (ortholog); FOUND IN nucleus (ortholog) 1 107910468 107987895 + 30032202 116902170 MODEL JAAIVD010000025;XM_032904517 XP_032760408 protein-coding 625877771 LOC116889143 ribosome biogenesis protein NSA2 homolog X 64130716 64131643 - 116889143 MODEL JAAIVD010000014 pseudo 625877772 LOC116910611 tubulin gamma-2 chain 9 60454125 60460068 + 22301074;30032202 116910611 MODEL JAAIVD010000002;XM_032914558 XP_032770449 protein-coding 625877786 Pag1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of T cell activation (ortholog); regulation of T cell activation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); schizophrenia (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) 3 143779891 143865387 - 22301074;30032202 116897032 MODEL JAAIVD010000012;XM_032898649;XM_032898650 XP_032754540;XP_032754541 phosphoprotein associated with glycosphingolipid-enriched microdomains 1 protein-coding 625877799 LOC116885072 small nucleolar RNA SNORA76 15 76287558 76287693 + 116885072 MODEL JAAIVD010000010;XR_004385946 snorna 625877802 LOC116895038 small nucleolar RNA SNORA17 2 191041475 191041612 + 116895038 MODEL JAAIVD010000001;XR_004387224 snorna 625877805 Ptx4 pentraxin 4 9 2389221 2393575 + 116910561 MODEL JAAIVD010000002;XM_032914473;XM_032914475 XP_032770364;XP_032770366 pentraxin-4 protein-coding 625877812 LOC116907514 olfactory receptor 867-like 8 16032637 16033632 + 22301074;30032202 116907514 MODEL JAAIVD010000027;XM_032910516 XP_032766407 protein-coding 625877815 LOC116907442 olfactory receptor 143-like 8 31982798 31983754 + 22301074;30032202 116907442 MODEL JAAIVD010000027;XM_032910413 XP_032766304 protein-coding 625877819 Cnpy1 canopy FGF signaling regulator 1 6 157003874 157012574 - 30032202 116904235 MODEL JAAIVD010000024;XM_032907179 XP_032763070 protein canopy homolog 1 protein-coding 625877827 Fam168b family with sequence similarity 168 member B INVOLVED IN axonogenesis (ortholog); gene expression (ortholog); neurogenesis (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN membrane (ortholog) 4 111022781 111055437 - 116899280 MODEL JAAIVD010000003;XM_032900912 XP_032756803 myelin-associated neurite-outgrowth inhibitor protein-coding 625877839 Slc12a9 solute carrier family 12 member 9 16 16698571 16716383 + 22301074;30032202 116885204 MODEL JAAIVD010000004;XM_032886436 XP_032742327 protein-coding 625877857 Atp1a3 ATPase Na+/K+ transporting subunit alpha 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); D1 dopamine receptor binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); blood circulation (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH alternating hemiplegia of childhood (ortholog); Alternating Hemiplegia of Childhood 2 (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); cell surface (ortholog) 2 169699584 169728408 + 22301074;30032202 116892473 MODEL JAAIVD010000001;XM_032894198 XP_032750089 sodium/potassium-transporting ATPase subunit alpha-3 protein-coding 625877884 LOC116906353 small nucleolar RNA SNORD113/SNORD114 family 7 127212206 127212286 + 116906353 MODEL JAAIVD010000026 pseudo 625877885 Cav2 caveolin 2 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); heterotrimeric G-protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN basement membrane organization (ortholog); caveola assembly (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; syndecan signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Autoimmune Myocarditis (ortholog); high grade glioma (ortholog); FOUND IN acrosomal membrane (ortholog); caveola (ortholog); caveolar macromolecular signaling complex (ortholog) 6 121674749 121682372 - 22301074;30032202 116904062 MODEL JAAIVD010000024;XM_032906924 XP_032762815 caveolin-2 protein-coding 625877892 LOC116889718 probable GTP-binding protein EngB 22301074 116889718 MODEL JAAIVD010000061;XM_032890597 XP_032746488 protein-coding 625877893 LOC116898496 post-GPI attachment to proteins factor 2-like 4 122555919 122556445 - 116898496 MODEL JAAIVD010000003 pseudo 625877894 LOC116897245 uncharacterized LOC116897245 3 196483112 196489484 - 116897245 MODEL JAAIVD010000012;XR_004387405 ncrna 625877899 Zdhhc2 zDHHC palmitoyltransferase 2 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-cysteine S-myristoyltransferase activity (ortholog); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of AMPA glutamate receptor clustering (ortholog); positive regulation of endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); Weight Gain (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) 13 46990896 47053866 - 30032202 116914265 MODEL JAAIVD010000008;XM_032918486 XP_032774377 palmitoyltransferase ZDHHC2;zinc finger DHHC-type palmitoyltransferase 2 protein-coding 625877916 LOC116895744 glyceraldehyde-3-phosphate dehydrogenase-like 3 35005161 35005586 + 22301074;30032202 116895744 MODEL JAAIVD010000012;XM_032896914 XP_032752805 protein-coding 625877919 Rhpn2 rhophilin Rho GTPase binding protein 2 INVOLVED IN glomerular filtration (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 2 163273876 163333089 - 22301074;30032202 116892268 MODEL JAAIVD010000001;XM_032893857 XP_032749748 rhophilin-2 protein-coding 625877938 LOC116888356 elongation factor 1-alpha 1-like 1 87124881 87126284 + 116888356 MODEL JAAIVD010000025 pseudo 625877939 LOC116905003 bile acid-CoA:amino acid N-acyltransferase 7 57384431 57391990 + 22301074;30032202 116905003 MODEL JAAIVD010000026;XM_032907688 XP_032763579 protein-coding 625877946 Casp3 caspase 3 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); apoptotic process (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN apoptotic cell death pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); death-inducing signaling complex (ortholog) 13 41290923 41309762 - 22301074;30032202 116914546 MODEL JAAIVD010000008;XM_032918881 XP_032774772 caspase-3 protein-coding 625877957 LOC116899463 60S ribosomal protein L29-like 4 139072483 139072973 - 22301074;30032202 116899463 MODEL JAAIVD010000003;XM_032901261 XP_032757152 protein-coding 625877961 Mfap3l microfibril associated protein 3 like FOUND IN cell junction (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 13 28304317 28349325 - 116914220 MODEL JAAIVD010000008;XM_032918416 XP_032774307 microfibrillar-associated protein 3-like protein-coding 625877968 LOC116895109 U2 spliceosomal RNA 2 42446823 42446909 + 116895109 MODEL JAAIVD010000001 pseudo 625877969 Pld1 phospholipase D1 ENCODES a protein that exhibits phospholipase D activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); defense response to Gram-positive bacterium (ortholog); phosphatidic acid biosynthetic process (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); developmental cardiac valvular defect (ortholog); Experimental Seizures (ortholog); FOUND IN apical plasma membrane (ortholog); cholinergic synapse (ortholog); endocytic vesicle (ortholog) 3 126531701 126733956 - 22301074;30032202 116896987 MODEL JAAIVD010000012;XM_032898579;XM_032898580;XM_032898581 XP_032754470;XP_032754471;XP_032754472 protein-coding 625878007 LOC116889619 ribosome biogenesis regulatory protein homolog Y 681521 682465 - 116889619 MODEL JAAIVD010000015 pseudo 625878008 Samd7 sterile alpha motif domain containing 7 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH macular degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); PRC1 complex (ortholog) 3 124981475 124996193 + 22301074 116895557 MODEL JAAIVD010000012;XM_032896793 XP_032752684 sterile alpha motif domain-containing protein 7 protein-coding 625878017 Gnrhr gonadotropin releasing hormone receptor ENCODES a protein that exhibits gonadotropin-releasing hormone receptor activity (ortholog); growth hormone-releasing hormone receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); amenorrhea (ortholog); Delayed Puberty (ortholog) 11 559545 579065 - 22301074;30032202 116912421 MODEL JAAIVD010000006;XM_032916488;XM_032916489 XP_032772379;XP_032772380 gonadotropin-releasing hormone receptor protein-coding 625878028 LOC116912634 alpha-S2-casein-like B 11 1133182 1150690 - 22301074;30032202 116912634 MODEL JAAIVD010000006;XM_032916752 XP_032772643 protein-coding 625878040 Pxn paxillin ENCODES a protein that exhibits beta-catenin binding (ortholog); BH4 domain binding (ortholog); integrin binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; integrin mediated signaling pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); lung non-small cell carcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cytosol (ortholog) 16 38270797 38318050 - 30032202 116885304 MODEL JAAIVD010000004;XM_032886554;XM_032886555;XM_032886556;XM_032886557;XM_032886558 XP_032742445;XP_032742446;XP_032742447;XP_032742448;XP_032742449 protein-coding 625878070 LOC116893236 60S ribosomal protein L27a-like 2 121077688 121078141 + 116893236 MODEL JAAIVD010000001 pseudo 625878071 LOC116908183 cyclin-dependent kinases regulatory subunit 2-like 8 53321398 53348525 - 116908183 MODEL JAAIVD010000027 pseudo 625878072 Bub1 BUB1 mitotic checkpoint serine/threonine kinase ENCODES a protein that exhibits histone H2A kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); cytosol (ortholog) 5 106577954 106608655 - 22301074;30032202 116901943 MODEL JAAIVD010000023;XM_032904176 XP_032760067 mitotic checkpoint serine/threonine-protein kinase BUB1 protein-coding 625878101 Gpbp1 GC-rich promoter binding protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) 3 185554276 185619418 + 22301074;30032202 116897197 MODEL JAAIVD010000012;XM_032898900;XM_032898901;XM_032898902 XP_032754791;XP_032754792;XP_032754793 vasculin protein-coding 625878121 Thrb thyroid hormone receptor beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cellular response to thyroid hormone stimulus (ortholog); embryonic organ development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); breast cancer (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 12 87040043 87133169 + 22301074;30032202 116913108 MODEL JAAIVD010000007;XM_032917248;XM_032917249;XM_032917250 XP_032773139;XP_032773140;XP_032773141 protein-coding 625878140 LOC116905054 uncharacterized LOC116905054 7 68406673 68439803 - 30032202 116905054 MODEL JAAIVD010000026;XM_032907745;XM_032907746 XP_032763636;XP_032763637 uncharacterized protein LOC116905054 protein-coding 625878154 Cpne3 copine 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to growth factor stimulus (ortholog); ERBB2 signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 124160441 124192667 + 30032202 116903111 MODEL JAAIVD010000025;XM_032905448 XP_032761339 copine-3 protein-coding 625878173 LOC116898450 interleukin-17A-like 4 98080468 98082434 + 116898450 MODEL JAAIVD010000003 pseudo 625878174 Map2k5 mitogen-activated protein kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); ERK5 cascade (ortholog); heart development (ortholog); PARTICIPATES IN altered Erk5 MAPK signaling pathway; Erk5 MAPK signaling pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Body Weight (ortholog); Cardiomegaly (ortholog); FOUND IN spindle (ortholog) 8 57453510 57674322 - 22301074 116907769 MODEL JAAIVD010000027;XM_032910908;XM_032910909 XP_032766799;XP_032766800 dual specificity mitogen-activated protein kinase kinase 5 protein-coding 625878203 LOC116889090 fumarate hydratase, mitochondrial-like X 28485062 28486371 - 116889090 MODEL JAAIVD010000014 pseudo 625878204 Dgkq diacylglycerol kinase theta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); diacylglycerol metabolic process (ortholog); ASSOCIATED WITH Sjogren's syndrome (ortholog); Usher syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 11 18434365 18448304 - 22301074;30032202 116912171 MODEL JAAIVD010000006;XM_032916097 XP_032771988 protein-coding 625878230 LOC116906418 small nucleolar RNA SNORA28 7 129130975 129131100 + 116906418 MODEL JAAIVD010000026;XR_004388680 snorna 625878233 Ogfod2 2-oxoglutarate and iron dependent oxygenase domain containing 2 16 29750368 29753339 - 22301074 116885518 MODEL JAAIVD010000004;XM_032886813;XM_032886814 XP_032742704;XP_032742705 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 2 protein-coding 625878248 LOC116889869 60S ribosomal protein L7a-like 1 155176140 155176927 - 116889869 MODEL JAAIVD010000025 pseudo 625878249 Sepsecs Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebellar hypoplasia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 53466641 53495550 + 22301074;30032202 116912217 MODEL JAAIVD010000006;XM_032916165;XM_032916166 XP_032772056;XP_032772057 O-phosphoseryl-tRNA(Sec) selenium transferase protein-coding 625878267 Pja2 praja ring finger ubiquitin ligase 2 ENCODES a protein that exhibits protein kinase A catalytic subunit binding (ortholog); protein kinase A regulatory subunit binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN inflammatory response (ortholog); innate immune response (ortholog); long-term memory (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 174369716 174419425 - 30032202 116899692 MODEL JAAIVD010000003;XM_032901715;XM_032901716 XP_032757606;XP_032757607 E3 ubiquitin-protein ligase Praja-2 protein-coding 625878282 Bmal2 basic helix-loop-helix ARNT like 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); positive regulation of circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); FOUND IN CLOCK-BMAL transcription complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 4453528 4500051 + 22301074;30032202 116903094 MODEL JAAIVD010000024;XM_032905416 XP_032761307 Arntl2 aryl hydrocarbon receptor nuclear translocator like 2;aryl hydrocarbon receptor nuclear translocator-like protein 2 protein-coding 625878302 Llph LLP homolog, long-term synaptic facilitation factor ENCODES a protein that exhibits basal RNA polymerase II transcription machinery binding (ortholog); INVOLVED IN dendrite extension (ortholog); positive regulation of dendritic spine development (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 1 198202822 198208108 + 30032202 116909437 MODEL JAAIVD010000025;XM_032913015 XP_032768906 protein LLP homolog protein-coding 625878309 LOC116895289 uricase 3 14275710 14310536 - 22301074;30032202 116895289 MODEL JAAIVD010000012;X13098;XM_032896601 CAA31490;XP_032752492 protein-coding 625878321 Gcdh glutaryl-CoA dehydrogenase ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); glutaryl-CoA dehydrogenase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); fatty acid oxidation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH congenital dyserythropoietic anemia type IVa (ortholog); genetic disease (ortholog); glutaric acidemia I (ortholog); FOUND IN mitochondrion (ortholog) 17 15396972 15402841 + 22301074;30032202 116886242 MODEL JAAIVD010000011;XM_032887652;XM_032887653 XP_032743543;XP_032743544 glutaryl-CoA dehydrogenase, mitochondrial protein-coding 625878340 Cd247 CD247 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); Fc-gamma receptor signaling pathway (ortholog); positive regulation of protein localization to cell surface (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); immunodeficiency 25 (ortholog); severe combined immunodeficiency (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cytoplasm (ortholog); Fc-gamma receptor III complex (ortholog) 10 44891658 44966442 + 22301074 116911382 MODEL JAAIVD010000005;XM_032915331;XM_032915332 XP_032771222;XP_032771223 T-cell surface glycoprotein CD3 zeta chain protein-coding 625878354 Mgat5 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of receptor signaling pathway via STAT (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Enterovirus Infections (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 10 8256105 8542572 - 22301074;30032202 116911250 MODEL JAAIVD010000005;XM_032915150 XP_032771041 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase A protein-coding 625878377 LOC116910886 RNA-binding protein FUS-like 10 7832779 7834358 - 116910886 MODEL JAAIVD010000005 pseudo 625878378 Mfsd12 major facilitator superfamily domain containing 12 ENCODES a protein that exhibits cysteine transmembrane transporter activity (ortholog); INVOLVED IN cysteine transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); pigment metabolic process involved in pigmentation (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); melanosome (ortholog) 1 153528484 153535205 - 30032202 116904337 MODEL JAAIVD010000025;XM_032907239;XM_032907240;XM_032907243 XP_032763130;XP_032763131;XP_032763134 major facilitator superfamily domain-containing protein 12 protein-coding 625878399 Colec12 collectin subfamily member 12 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); pattern recognition receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); phagocytosis, recognition (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); substance-related disorder (ortholog) 15 34205609 34237754 - 30032202 116884748 MODEL JAAIVD010000010;XM_032885967 XP_032741858 collectin-12 protein-coding 625878411 Kif13a kinesin family member 13A ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); Golgi to plasma membrane protein transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN centrosome (ortholog); endosome membrane (ortholog); midbody (ortholog) 14 65733688 65918225 - 22301074;30032202 116884056 MODEL JAAIVD010000009;XM_032885303 XP_032741194 kinesin-like protein KIF13A protein-coding 625878455 LOC116892835 2'-deoxynucleoside 5'-phosphate N-hydrolase 1-like 2 191661030 191661586 - 116892835 MODEL JAAIVD010000001 pseudo 625878456 LOC116895975 40S ribosomal protein S14-like 3 156616846 156617276 + 116895975 MODEL JAAIVD010000012 pseudo 625878457 Pcgf5 polycomb group ring finger 5 ENCODES a protein that exhibits histone H2AK119 ubiquitin ligase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); random inactivation of X chromosome (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 2 37358418 37475913 - 30032202 116891140 MODEL JAAIVD010000001;XM_032891881;XM_032891882;XM_032891883 XP_032747772;XP_032747773;XP_032747774 polycomb group RING finger protein 5 protein-coding 625878477 LOC116886249 pyruvate kinase PKM-like 1 14295158 14299540 + 116886249 MODEL JAAIVD010000025 pseudo 625878478 LOC116884623 40S ribosomal protein S2-like 15 43431202 43432446 + 116884623 MODEL JAAIVD010000010 pseudo 625878479 Enoph1 enolase-phosphatase 1 ENCODES a protein that exhibits acireductone synthase activity (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog) 11 10286461 10313268 + 22301074;30032202 116912893 MODEL JAAIVD010000006;XM_032917151;XM_032917152 XP_032773042;XP_032773043 enolase-phosphatase E1 protein-coding 625878494 LOC116909193 histone H3.3A-like 1 195045908 195046354 - 116909193 MODEL JAAIVD010000025 pseudo 625878495 LOC116905989 uncharacterized LOC116905989 1 155798311 155805745 + 116905989 MODEL JAAIVD010000025;XR_004388582 ncrna 625878500 Pwwp3b PWWP domain containing 3B ASSOCIATED WITH factor VIII deficiency (ortholog) X 93618621 93622454 - 116889162 MODEL JAAIVD010000014;XM_032890330 XP_032746221 PWWP domain-containing DNA repair factor 3B protein-coding 625878505 LOC116885446 protein DBF4 homolog A-like 1 70729253 70731192 + 116885446 MODEL JAAIVD010000025 pseudo 625878506 Chrnb4 cholinergic receptor nicotinic beta 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); locomotory behavior (ortholog); neuronal action potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); chronic obstructive pulmonary disease (ortholog); cocaine abuse (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 8 49105759 49124647 - 22301074;30032202 116907753 MODEL JAAIVD010000027;XM_032910891 XP_032766782 neuronal acetylcholine receptor subunit beta-4 protein-coding 625878516 Ifi35 interferon induced protein 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN macrophage activation involved in immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Human Influenza (ortholog); Spontaneous Abortions (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 9 60738104 60747335 + 30032202 116908828 MODEL JAAIVD010000002;XM_032912248 XP_032768139 interferon-induced 35 kDa protein protein-coding 625878527 Tfap2d transcription factor AP-2 delta ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN inferior colliculus development (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN transcription regulator complex (ortholog) 4 96681357 96740197 + 30032202 116898101 MODEL JAAIVD010000003;XM_032899485 XP_032755376 transcription factor AP-2-delta protein-coding 625878538 Socs6 suppressor of cytokine signaling 6 INVOLVED IN negative regulation of T cell activation (ortholog); proteasomal protein catabolic process (ortholog); regulation of growth (ortholog); PARTICIPATES IN insulin signaling pathway; Jak-Stat signaling pathway; FOUND IN immunological synapse (ortholog) 15 43869524 43892695 + 22301074;30032202 116884312 MODEL JAAIVD010000010;XM_032885420;XM_032885421;XM_032885422 XP_032741311;XP_032741312;XP_032741313 protein-coding 625878549 Prkag1 protein kinase AMP-activated non-catalytic subunit gamma 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); import into nucleus (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 271636179 271653287 - 116884859 MODEL JAAIVD010000025;XM_032886101 XP_032741992 5'-AMP-activated protein kinase subunit gamma-1 protein-coding 625878565 LOC116908339 small nucleolar RNA SNORA73 family 8 111357146 111357348 + 116908339 MODEL JAAIVD010000027;XR_004388891 snorna 625878568 LOC116887305 60S ribosomal protein L15-like 18 33265764 33266372 + 116887305 MODEL JAAIVD010000013 pseudo 625878569 Zmat5 zinc finger matrin-type 5 FOUND IN nucleoplasm (ortholog); U12-type spliceosomal complex (ortholog) 11 73676669 73715929 + 22301074;30032202 116912278 MODEL JAAIVD010000006;XM_032916273;XM_032916274 XP_032772164;XP_032772165 zinc finger matrin-type protein 5 protein-coding 625878582 LOC116910884 uncharacterized protein C9orf85 homolog 10 88060403 88065609 + 116910884 MODEL JAAIVD010000005 pseudo 625878583 Minar1 membrane integral NOTCH2 associated receptor 1 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN plasma membrane (ortholog) 8 81766327 81798718 + 30032202 116907829 MODEL JAAIVD010000027;XM_032911014;XM_032911015 XP_032766905;XP_032766906 major intrinsically disordered Notch2-binding receptor 1 protein-coding 625878596 LOC116890631 U2 spliceosomal RNA 1 228257063 228257249 - 116890631 MODEL JAAIVD010000025;XR_004386774 snrna 625878599 Pimreg PICALM interacting mitotic regulator FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 9 43458705 43463523 - 116909915 MODEL JAAIVD010000002;XM_032913676 XP_032769567 protein PIMREG protein-coding 625878609 Idnk IDNK gluconokinase 14 79960200 79967260 - 30032202 116883755 MODEL JAAIVD010000009;XM_032884999;XM_032885000 XP_032740890;XP_032740891 probable gluconokinase protein-coding 625878620 LOC116905160 PCNA-interacting partner-like 7 87620062 87621643 + 116905160 MODEL JAAIVD010000026 pseudo 625878621 Muc13 mucin 13, cell surface associated ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN maintenance of gastrointestinal epithelium (ortholog); ASSOCIATED WITH ischemia (ortholog); Nematode Infections (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); extracellular space (ortholog) 4 18592306 18611206 + 116898796 MODEL JAAIVD010000003;XM_032900147 XP_032756038 mucin-13 protein-coding 625878635 LOC116902088 vitamin K epoxide reductase complex subunit 1-like protein 1 5 130127377 130127830 - 116902088 MODEL JAAIVD010000023 pseudo 625878636 Limch1 LIM and calponin homology domains 1 ENCODES a protein that exhibits myosin II head/neck binding (ortholog); INVOLVED IN cytoplasmic actin-based contraction involved in cell motility (ortholog); negative regulation of cell migration (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); myosin II complex (ortholog); stress fiber (ortholog) 11 23871928 24181227 + 22301074;30032202 116912086 MODEL JAAIVD010000006;XM_032915969;XM_032915970;XM_032915971 XP_032771860;XP_032771861;XP_032771862 LIM and calponin homology domains-containing protein 1 protein-coding 625878674 LOC116895888 60S ribosomal protein L23-like 3 114236879 114237325 - 116895888 MODEL JAAIVD010000012 pseudo 625878675 LOC116904052 60S ribosomal protein L3-like 6 117688079 117688797 - 22301074;30032202 116904052 MODEL JAAIVD010000024;XM_032906911 XP_032762802 protein-coding 625878679 LOC116897409 U6 spliceosomal RNA 3 90519823 90519925 + 116897409 MODEL JAAIVD010000012;XR_004387452 snrna 625878682 Mpp2 MAGUK p55 scaffold protein 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); structural constituent of postsynaptic density (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN excitatory postsynaptic potential (ortholog); long-term synaptic potentiation (ortholog); protein homooligomerization (ortholog); FOUND IN cytoskeleton (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 9 61352358 61379435 - 22301074;30032202 116909196 MODEL JAAIVD010000002;XM_032912695;XM_032912696 XP_032768586;XP_032768587 MAGUK p55 subfamily member 2;membrane palmitoylated protein 2 protein-coding 625878701 LOC116888612 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like X 42471731 42472649 - 116888612 MODEL JAAIVD010000014 pseudo 625878702 LOC116885078 U6 spliceosomal RNA 15 22703082 22703184 - 116885078 MODEL JAAIVD010000010;XR_004385951 snrna 625878705 Dnajc21 DnaJ heat shock protein family (Hsp40) member C21 ASSOCIATED WITH Bone Marrow Failure Syndrome 3 (ortholog); Congenital Bone Marrow Failure Syndromes (ortholog); Funnel Chest (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) 3 170266092 170287051 + 22301074;30032202 116896002 MODEL JAAIVD010000012;XM_032897027 XP_032752918 dnaJ homolog subfamily C member 21 protein-coding 625878720 Lrrn3 leucine rich repeat neuronal 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN positive regulation of protein phosphorylation (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN clathrin adaptor complex (ortholog) 7 54614478 54617509 - 22301074 116904991 MODEL JAAIVD010000026;XM_032907672 XP_032763563 leucine-rich repeat neuronal protein 3 protein-coding 625878725 Lrp2 LDL receptor related protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium ion binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); animal organ regeneration (ortholog); aorta development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); acute kidney failure (ortholog); Albuminuria (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) 5 46732163 46887606 - 22301074 116901481 MODEL JAAIVD010000023;XM_032903435 XP_032759326 low-density lipoprotein receptor-related protein 2 protein-coding 625878809 LOC116902681 taste receptor type 2 member 123 6 15794785 15795786 + 22301074;30032202 116902681 MODEL JAAIVD010000024;XM_032905040 XP_032760931 protein-coding 625878812 Ptpn6 protein tyrosine phosphatase non-receptor type 6 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cytokine receptor binding (ortholog); natural killer cell lectin-like receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell differentiation (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anogenital venereal wart (ortholog); autism spectrum disorder (ortholog); calcinosis (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); apical dendrite (ortholog); cell-cell junction (ortholog) 6 23144870 23163426 + 22301074 116903284 MODEL JAAIVD010000024;XM_032905707 XP_032761598 tyrosine-protein phosphatase non-receptor type 6 protein-coding 625878832 LOC116913048 U6 spliceosomal RNA 11 4087954 4088065 - 116913048 MODEL JAAIVD010000006;XR_004389583 snrna 625878835 Spmip10 sperm microtubule inner protein 10 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); sperm flagellum (ortholog) 15 75232636 75236398 - 30032202 116884604 MODEL JAAIVD010000010;XM_032885743 XP_032741634 Tex43 sperm associated microtubule inner protein 10;testis expressed 43;testis-expressed protein 43 protein-coding 625878842 LOC116903788 submandibular gland secretory Glx-rich protein CB-like 6 17029672 17032050 - 30032202 116903788 MODEL JAAIVD010000024;XM_032906482 XP_032762373 protein-coding 625878847 Ficd FIC domain protein adenylyltransferase ENCODES a protein that exhibits AMPylase activity (ortholog); ATP binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN protein adenylylation (ortholog); regulation of IRE1-mediated unfolded protein response (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 92 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 40235661 40239167 - 22301074 116885615 MODEL JAAIVD010000004;XM_032886914 XP_032742805 protein adenylyltransferase FICD protein-coding 625878853 Kcnk9 potassium two pore domain channel subfamily K member 9 ENCODES a protein that exhibits identical protein binding (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); negative regulation of aldosterone secretion (ortholog); potassium ion import across plasma membrane (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Birk-Barel syndrome (ortholog); childhood absence epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog); synaptic vesicle (ortholog) 1 245301291 245343362 - 22301074;30032202 116912348 MODEL JAAIVD010000025;XM_032916403;XM_032916409 XP_032772294;XP_032772300 potassium channel subfamily K member 9 protein-coding 625878863 Supt3h SPT3 homolog, SAGA and STAGA complex component ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) 4 84766194 85092383 - 22301074;30032202 116899140 MODEL JAAIVD010000003;XM_032900678;XM_032900679;XM_032900680 XP_032756569;XP_032756570;XP_032756571 transcription initiation protein SPT3 homolog protein-coding 625878885 LOC116894638 glyceraldehyde-3-phosphate dehydrogenase-like 2 196763105 196764108 - 116894638 MODEL JAAIVD010000001 pseudo 625878886 Tmem230 transmembrane protein 230 INVOLVED IN axonal transport (ortholog); synaptic vesicle transport (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); prostate cancer (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); late endosome (ortholog) 5 111913102 111962375 - 30032202 116902000 MODEL JAAIVD010000023;XM_032904259;XM_032904261;XM_032904262;XM_032904263;XM_032904264 XP_032760150;XP_032760152;XP_032760153;XP_032760154;XP_032760155 protein-coding 625878904 Nipa2 NIPA magnesium transporter 2 INVOLVED IN magnesium ion transport (ortholog); FOUND IN plasma membrane (ortholog) 2 143231835 143257963 + 22301074;30032202 116892046 MODEL JAAIVD010000001;XM_032893511;XM_032893513;XM_032893514;XM_032893515;XM_032893516;XM_032893517;XM_032893518;XM_032893519 XP_032749402;XP_032749404;XP_032749405;XP_032749406;XP_032749407;XP_032749408;XP_032749409;XP_032749410 magnesium transporter NIPA2 protein-coding 625878939 LOC116887844 60S ribosomal protein L10-3-like X 40802045 40895440 - 116887844 MODEL JAAIVD010000014 pseudo 625878940 LOC116890072 olfactory receptor 12-like 1 215008912 215009856 - 22301074;30032202 116890072 MODEL JAAIVD010000025;XM_032890835 XP_032746726 protein-coding 625878943 Ddx11 DEAD/H-box helicase 11 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent activity, acting on RNA (ortholog); INVOLVED IN cellular response to bleomycin (ortholog); cellular response to cisplatin (ortholog); cellular response to hydroxyurea (ortholog); ASSOCIATED WITH Chromosome Breakage (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); midbody (ortholog) 4 154905926 154932010 - 22301074;30032202 116899560 MODEL JAAIVD010000003;XM_032901456 XP_032757347 ATP-dependent DNA helicase DDX11 protein-coding 625878973 Spmap1 sperm microtubule associated protein 1 9 56609537 56613545 + 116910168 MODEL JAAIVD010000002;XM_032914027 XP_032769918 C9H17orf98 chromosome 9 C17orf98 homolog;uncharacterized protein C17orf98 homolog protein-coding 625878980 Ddx39b DExD-box helicase 39B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN liver development (ortholog); mRNA export from nucleus (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; spliceosome pathway; ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) 18 7841145 7854098 + 22301074;30032202 116886924 MODEL JAAIVD010000013;XM_032888403 XP_032744294 spliceosome RNA helicase DDX39B protein-coding 625878995 Mov10l1 Mov10 like RNA helicase 1 ENCODES a protein that exhibits piRNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN germ cell development (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH azoospermia (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN P granule (ortholog); pi-body (ortholog) 1 258297723 258363122 + 22301074 116914884 MODEL JAAIVD010000025;XM_032919328 XP_032775219 Mov10 like RISC complex RNA helicase 1;RNA helicase Mov10l1 protein-coding 625879023 Slc43a1 solute carrier family 43 member 1 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); podocyte foot (ortholog) 5 62222412 62246533 + 22301074;30032202 116900227 MODEL JAAIVD010000023;XM_032901978 XP_032757869 large neutral amino acids transporter small subunit 3 protein-coding 625879042 Jdp2 Jun dimerization protein 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of fat cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 7 99708448 99750539 + 22301074;30032202 116905299 MODEL JAAIVD010000026;XM_032908167 XP_032764058 protein-coding 625879050 Gas2l2 growth arrest specific 2 like 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 3 (ortholog); primary ciliary dyskinesia 41 (ortholog); FOUND IN actin filament (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 9 87254861 87261853 + 22301074;30032202 116909482 MODEL JAAIVD010000002;XM_032913078 XP_032768969 GAS2-like protein 2 protein-coding 625879059 Atp6v1g2 ATPase H+ transporting V1 subunit G2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); synaptic vesicle membrane (ortholog); vacuolar proton-transporting V-type ATPase complex (ortholog) 18 7836265 7838495 + 22301074;30032202 116887071 MODEL JAAIVD010000013;XM_032888575;XM_032888576 XP_032744466;XP_032744467 V-type proton ATPase subunit G 2 protein-coding 625879069 Btg2 BTG anti-proliferation factor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); associative learning (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); brain ischemia (ortholog); breast cancer (ortholog) 10 1609721 1613478 + 30032202 116911313 MODEL JAAIVD010000005;XM_032915228 XP_032771119 protein BTG2 protein-coding 625879075 LOC116914774 sperm-associated antigen 11 13 64971981 64973713 - 22301074;30032202 116914774 MODEL JAAIVD010000008;XM_032919221 XP_032775112 protein-coding 625879081 Fyb2 FYN binding protein 2 INVOLVED IN cell adhesion mediated by integrin (ortholog); T cell receptor signaling pathway (ortholog); FOUND IN immunological synapse (ortholog); membrane raft (ortholog) 1 49580784 49702145 - 22301074;30032202 116891015 MODEL JAAIVD010000025;XM_032891730 XP_032747621 FYN-binding protein 2 protein-coding 625879105 Scaper S-phase cyclin A associated protein in the ER INVOLVED IN antral ovarian follicle growth (ortholog); ovarian follicle development (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 1 (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 8 49619016 49884259 - 22301074 116908061 MODEL JAAIVD010000027;XM_032911331;XM_032911332 XP_032767222;XP_032767223 S phase cyclin A-associated protein in the endoplasmic reticulum protein-coding 625879136 LOC116894409 keratin-associated protein 13-1-like 2 158550117 158550881 + 116894409 MODEL JAAIVD010000001 pseudo 625879137 LOC116889844 ADP/ATP translocase 2-like 22301074;30032202 116889844 MODEL JAAIVD010001995;XM_032890676 XP_032746567 protein-coding 625879138 Trnaa-cgc transfer RNA alanine (anticodon CGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41435765 41435836 + 116884198 MODEL JAAIVD010000009 trna 625879139 LOC116908210 malate dehydrogenase, mitochondrial-like 8 70925423 70926650 + 116908210 MODEL JAAIVD010000027 pseudo 625879140 LOC116907235 40S ribosomal protein SA-like 8 15589731 15590617 + 116907235 MODEL JAAIVD010000027 pseudo 625879141 Runx1t1 RUNX1 partner transcriptional co-repressor 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); Dwarfism (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 129780787 129925848 - 22301074;30032202 116903258 MODEL JAAIVD010000025;XM_032905643;XM_032905653;XM_032905663;XM_032905674;XM_032905683;XM_032905691 XP_032761534;XP_032761544;XP_032761554;XP_032761565;XP_032761574;XP_032761582 protein CBFA2T1 protein-coding 625879173 LOC116908371 small nucleolar RNA SNORA32 8 77831256 77831377 - 116908371 MODEL JAAIVD010000027;XR_004388919 snorna 625879176 Ednra endothelin receptor type A ENCODES a protein that exhibits endothelin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); aorta development (ortholog); PARTICIPATES IN endothelin signaling pathway; inflammatory response pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); asthma (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog); T-tubule (ortholog) 17 22389030 22442843 + 22301074 116886648 MODEL JAAIVD010000011;XM_032888147 XP_032744038 endothelin-1 receptor protein-coding 625879189 LOC116914309 peptidyl-prolyl cis-trans isomerase A-like 13 37090607 37091175 + 116914309 MODEL JAAIVD010000008 pseudo 625879190 Tysnd1 trypsin like peroxisomal matrix peptidase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); proteolysis (ortholog); regulation of fatty acid beta-oxidation (ortholog); FOUND IN peroxisome (ortholog) 18 27519096 27525003 + 30032202 116887176 MODEL JAAIVD010000013;XM_032888728 XP_032744619 peroxisomal leader peptide-processing protease;trypsin domain containing 1 protein-coding 625879198 Treml1 triggering receptor expressed on myeloid cells like 1 INVOLVED IN calcium-mediated signaling (ortholog); platelet activation (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 4 81564676 81570933 - 30032202 116898029 MODEL JAAIVD010000003;XM_032899418 XP_032755309 trem-like transcript 1 protein protein-coding 625879207 Slc45a4 solute carrier family 45 member 4 ENCODES a protein that exhibits sucrose:proton symporter activity (ortholog); INVOLVED IN sucrose transport (ortholog) 1 246338958 246406339 - 22301074;30032202 116912428 MODEL JAAIVD010000025;XM_032916498;XM_032916505 XP_032772389;XP_032772396 protein-coding 625879222 Ppp1r12c protein phosphatase 1 regulatory subunit 12C 2 177081262 177104319 - 22301074;30032202 116892653 MODEL JAAIVD010000001;XM_032894475;XM_032894476 XP_032750366;XP_032750367 protein-coding 625879250 Sar1a secretion associated Ras related GTPase 1A ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coating (ortholog); COPII-coated vesicle cargo loading (ortholog); FOUND IN COPII vesicle coat (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 18 27503713 27516730 + 22301074;30032202 116886860 MODEL JAAIVD010000013;XM_032888313 XP_032744204 GTP-binding protein SAR1a protein-coding 625879261 Ccdc40 coiled-coil domain 40 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hyper IgE recurrent infection syndrome 2 (ortholog); hyper IgE syndrome (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 9 64762936 64802638 - 30032202 116910136 MODEL JAAIVD010000002;XM_032913971 XP_032769862 coiled-coil domain containing 40;coiled-coil domain-containing protein 40 protein-coding 625879286 Lrriq4 leucine rich repeats and IQ motif containing 4 3 124873644 124895798 + 22301074 116895926 MODEL JAAIVD010000012;XM_032897000 XP_032752891 leucine-rich repeat and IQ domain-containing protein 4 protein-coding 625879296 LOC116898472 small nuclear ribonucleoprotein Sm D1-like 4 111236827 111237253 - 116898472 MODEL JAAIVD010000003 pseudo 625879297 Sap30bp SAP30 binding protein ASSOCIATED WITH schizophrenia (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 68095022 68129061 - 22301074;30032202 116909813 MODEL JAAIVD010000002;XM_032913515;XM_032913516 XP_032769406;XP_032769407 SAP30-binding protein protein-coding 625879315 LOC116902638 small nucleolar RNA U85 5 127714624 127714935 + 116902638 MODEL JAAIVD010000023;XR_004388215 snorna 625879318 Elmo1 engulfment and cell motility 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based process (ortholog); cell motility (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophagus adenocarcinoma (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 14 39133130 39662452 - 30032202 116883890 MODEL JAAIVD010000009;XM_032885159;XM_032885160;XM_032885162;XM_032885163 XP_032741050;XP_032741051;XP_032741053;XP_032741054 engulfment and cell motility protein 1 protein-coding 625879353 LOC116897377 U4 spliceosomal RNA 3 94702256 94702423 + 116897377 MODEL JAAIVD010000012 pseudo 625879354 Eid1 EP300 interacting inhibitor of differentiation 1 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Mesothelioma (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 5 104004078 104005845 + 30032202 116901906 MODEL JAAIVD010000023;XM_032904120 XP_032760011 EP300-interacting inhibitor of differentiation 1 protein-coding 625879359 Ywhaz tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN angiogenesis (ortholog); antibacterial innate immune response (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; histone modification pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH absence epilepsy (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 210289055 210313838 - 30032202 116910615 MODEL JAAIVD010000025;XM_032914565 XP_032770456 14-3-3 protein zeta/delta protein-coding 625879369 Fam110c family with sequence similarity 110 member C ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of cell projection assembly (ortholog); FOUND IN cell cortex (ortholog) 7 44431330 44436007 + 30032202 116904945 MODEL JAAIVD010000026;XM_032907590 XP_032763481 protein FAM110C protein-coding 625879375 Dbr1 debranching RNA lariats 1 ENCODES a protein that exhibits RNA lariat debranching enzyme activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); RNA fragment catabolic process (ortholog); RNA splicing, via transesterification reactions (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); ENCEPHALITIS, ACUTE, INFECTION (VIRAL)-INDUCED, SUSCEPTIBILITY TO, 11 (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 90921555 90933688 + 30032202 116907312 MODEL JAAIVD010000027;XM_032910258 XP_032766149 lariat debranching enzyme protein-coding 625879387 LOC116907340 secreted seminal-vesicle Ly-6 protein 1-like 8 32767940 32769317 - 116907340 MODEL JAAIVD010000027;XM_032910278 XP_032766169 protein-coding 625879392 Ormdl3 ORMDL sphingolipid biosynthesis regulator 3 INVOLVED IN ceramide metabolic process (ortholog); motor behavior (ortholog); myelination (ortholog); ASSOCIATED WITH asthma (ortholog); ulcerative colitis (ortholog); FOUND IN endoplasmic reticulum (ortholog); serine palmitoyltransferase complex (ortholog) 9 55800767 55806785 + 22301074;30032202 116909584 MODEL JAAIVD010000002;XM_032913206;XM_032913207 XP_032769097;XP_032769098 ORM1-like protein 3 protein-coding 625879404 Cep63 centrosomal protein 63 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); innate immune response (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Seckel syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 8 93882813 93925531 - 30032202 116907359 MODEL JAAIVD010000027;XM_032910293;XM_032910294;XM_032910295;XM_032910296;XM_032910297;XM_032910299;XM_032910300;XM_032910301;XM_032910302;XM_032910303;XM_032910304 XP_032766184;XP_032766185;XP_032766186;XP_032766187;XP_032766188;XP_032766190;XP_032766191;XP_032766192;XP_032766193;XP_032766194;XP_032766195 centrosomal protein of 63 kDa protein-coding 625879451 LOC116888074 RPA-related protein RADX X 90081868 90108849 + 22301074;30032202 116888074 MODEL JAAIVD010000014;XM_032889452 XP_032745343 protein-coding 625879460 LOC116902564 small nucleolar RNA SNORA48 5 51851000 51851145 + 116902564 MODEL JAAIVD010000023;XR_004388160 snorna 625879463 Wdr6 WD repeat domain 6 ENCODES a protein that exhibits enzyme regulator activity (ortholog); insulin receptor substrate binding (ortholog); tRNA binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); negative regulation of autophagy (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 99901942 99908459 - 22301074;30032202 116907598 MODEL JAAIVD010000027;XM_032910646;XM_032910648 XP_032766537;XP_032766539 WD repeat-containing protein 6 protein-coding 625879478 LOC116885938 nidogen-2-like 16 44360500 44412286 + 116885938 MODEL JAAIVD010000004 pseudo 625879479 Ramp3 receptor activity modifying protein 3 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); amylin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); amylin receptor 3 signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); amylin receptor complex 3 (ortholog); cell surface (ortholog) 11 75590119 75607698 + 22301074;30032202 116912029 MODEL JAAIVD010000006;XM_032915915 XP_032771806 receptor activity-modifying protein 3 protein-coding 625879485 Ammecr1 AMMECR nuclear protein 1 ASSOCIATED WITH Dwarfism (ortholog); midface hypoplasia, hearing impairment, elliptocytosis, and nephrocalcinosis (ortholog); nephrocalcinosis (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 94955156 95056647 - 30032202 116889220 MODEL JAAIVD010000014;XM_032890374 XP_032746265 AMME syndrome candidate gene 1 protein protein-coding 625879495 Fhip1b FHF complex subunit HOOK interacting protein 1B INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN FHF complex (ortholog) 2 104214144 104235621 - 30032202 116891813 MODEL JAAIVD010000001;XM_032893168;XM_032893169;XM_032893170 XP_032749059;XP_032749060;XP_032749061 Fam160a2 FTS and Hook-interacting protein;family with sequence similarity 160 member A2 protein-coding 625879517 Hps4 HPS4 biogenesis of lysosomal organelles complex 3 subunit 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein dimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood coagulation (ortholog); lysosome organization (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak syndrome 1 (ortholog); FOUND IN BLOC-3 complex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 16 41601675 41631955 - 22301074 116885128 MODEL JAAIVD010000004;XM_032886284 XP_032742175 Hermansky-Pudlak syndrome 4 protein protein-coding 625879535 LOC116888104 homeobox protein orthopedia B-like X 98398495 98406578 + 30032202 116888104 MODEL JAAIVD010000014;XM_032889464 XP_032745355 protein-coding 625879541 LOC116913019 U1 spliceosomal RNA 11 50863483 50863634 + 116913019 MODEL JAAIVD010000006 pseudo 625879542 LOC116911388 NHP2-like protein 1 10 57319013 57319487 + 22301074;30032202 116911388 MODEL JAAIVD010000005;XM_032915342 XP_032771233 protein-coding 625879546 Mep1a meprin A subunit alpha ENCODES a protein that exhibits metallodipeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN epidermal growth factor receptor ligand maturation (ortholog); epidermal growth factor receptor signaling pathway (ortholog); signaling receptor ligand precursor processing (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN membrane (ortholog); meprin A complex (ortholog); plasma membrane (ortholog) 4 86340028 86366552 + 22301074;30032202 116899149 MODEL JAAIVD010000003;XM_032900700;XM_032900702 XP_032756591;XP_032756593 protein-coding 625879566 LOC116912018 MORF4 family-associated protein 1 11 68351901 68353748 + 116912018 MODEL JAAIVD010000006;XM_032915907 XP_032771798 protein-coding 625879571 LOC116895597 histone acetyltransferase KAT8-like 3 152071746 152073085 + 116895597 MODEL JAAIVD010000012 pseudo 625879572 LOC116899081 cAMP-dependent protein kinase inhibitor gamma-like 4 82216008 82216329 + 116899081 MODEL JAAIVD010000003 pseudo 625879573 Rnf17 ring finger protein 17 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog) 12 68328647 68447384 - 116913630 MODEL JAAIVD010000007;XM_032917896;XM_032917897;XM_032917898 XP_032773787;XP_032773788;XP_032773789 protein-coding 625879617 Tnrc6a trinucleotide repeat containing adaptor 6A INVOLVED IN cellular response to starvation (ortholog); endoderm development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH familial adult myoclonic epilepsy 6 (ortholog); Myoclonic Epilepsies (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); P-body (ortholog) 2 78681527 78834121 - 22301074;30032202 116891550 MODEL JAAIVD010000001;XM_032892712;XM_032892713;XM_032892714;XM_032892715;XM_032892716 XP_032748603;XP_032748604;XP_032748605;XP_032748606;XP_032748607 trinucleotide repeat-containing gene 6A protein protein-coding 625879659 LOC116888911 coiled-coil domain-containing protein 43-like X 23357885 23358829 - 116888911 MODEL JAAIVD010000014 pseudo 625879660 Ropn1 rhophilin associated tail protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); protein localization to cilium (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog); sperm principal piece (ortholog) 4 19431771 19460549 + 116897859 MODEL JAAIVD010000003;XM_032899266 XP_032755157 ropporin-1A protein-coding 625879670 LOC116908652 diazepam-binding inhibitor-like 5 9 94927738 94928822 + 22301074;30032202 116908652 MODEL JAAIVD010000002;XM_032911922 XP_032767813 protein-coding 625879676 LOC116883840 uncharacterized LOC116883840 14 18475790 18478776 - 116883840 MODEL JAAIVD010000009;XR_004385796 ncrna 625879681 Rnf7 ring finger protein 7 ENCODES a protein that exhibits cullin family protein binding (ortholog); NEDD8 ligase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cerebral cortex radially oriented cell migration (ortholog); cGAS/STING signaling pathway (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 87907795 87915974 - 22301074;30032202 116907220 MODEL JAAIVD010000027;XM_032910184;XM_032910185 XP_032766075;XP_032766076 RING-box protein 2 protein-coding 625879692 LOC116902665 U6 spliceosomal RNA 5 151263275 151263381 - 116902665 MODEL JAAIVD010000023;XR_004388227 snrna 625879695 LOC116886520 60S ribosomal protein L24-like 1 1391760 1392318 - 116886520 MODEL JAAIVD010000025 pseudo 625879696 LOC116887433 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8428203 8534838 + 30032202 116887433 MODEL JAAIVD010000013;XM_032889048;XM_032889049 XP_032744939;XP_032744940 protein-coding 625879710 Hspb1 heat shock protein family B (small) member 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to butyrate (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); FOUND IN axon (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) 16 18133564 18135215 - 30032202 116885307 MODEL JAAIVD010000004;XM_032886561 XP_032742452 heat shock protein beta-1 protein-coding 625879717 Tmem178b transmembrane protein 178B 6 99554594 99925799 - 22301074;30032202 116903919 MODEL JAAIVD010000024;XM_032906691 XP_032762582 protein-coding 625879725 LOC116890379 U6 spliceosomal RNA 1 234572624 234572723 + 116890379 MODEL JAAIVD010000025 pseudo 625879726 LOC116906862 zinc finger protein 709-like 1 157394495 157408530 - 22301074 116906862 MODEL JAAIVD010000025;XM_032909768 XP_032765659 protein-coding 625879734 LOC116904606 protein salvador homolog 1-like 6 24946107 24947247 + 116904606 MODEL JAAIVD010000024 pseudo 625879735 LOC116897567 small nucleolar RNA SNORA17 3 150845740 150845871 + 116897567 MODEL JAAIVD010000012;XR_004387578 snorna 625879738 LOC116892337 zinc finger protein 420 2 166163150 166165872 - 30032202 116892337 MODEL JAAIVD010000001;XM_032893973 XP_032749864 protein-coding 625879743 LOC116900356 olfactory receptor 5W2-like 5 69262899 69263834 - 22301074;30032202 116900356 MODEL JAAIVD010000023;XM_032902110 XP_032758001 protein-coding 625879747 Atp1b1 ATPase Na+/K+ transporting subunit beta 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); cardiac muscle contraction (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Developmental Disabilities (ortholog); essential hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 10 43661854 43683122 - 22301074;30032202 116911069 MODEL JAAIVD010000005;X63375;XM_032914837 XP_032770728 sodium/potassium-transporting ATPase subunit beta-1 protein-coding 625879757 Unc50 unc-50 inner nuclear membrane RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN protein localization to cell surface (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear inner membrane (ortholog) 4 113633195 113641019 + 30032202 116899299 MODEL JAAIVD010000003;XM_032900952;XM_032900953;XM_032900955 XP_032756843;XP_032756844;XP_032756846 protein unc-50 homolog protein-coding 625879771 Igll5 immunoglobulin lambda like polypeptide 5 ASSOCIATED WITH COVID-19 (ortholog) 4 2139133 2142124 - 30032202 116897770 MODEL JAAIVD010000003;XM_032899199 XP_032755090 immunoglobulin lambda-like polypeptide 5 protein-coding 625879776 Tacc1 transforming acidic coiled-coil containing protein 1 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cerebral cortex development (ortholog); interkinetic nuclear migration (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN cytosol (ortholog) 13 61265762 61314351 + 30032202 116914238 MODEL JAAIVD010000008;XM_032918444;XM_032918445;XM_032918446 XP_032774335;XP_032774336;XP_032774337 transforming acidic coiled-coil-containing protein 1 protein-coding 625879802 Letm2 leucine zipper and EF-hand containing transmembrane protein 2 FOUND IN mitochondrion (ortholog) 13 60894654 60915013 + 22301074;30032202 116915115 MODEL JAAIVD010000008;XM_032919550;XM_032919552;XM_032919553;XM_032919554;XM_032919555;XM_032919556;XM_032919557;XM_032919558;XM_032919559;XM_032919560 XP_032775441;XP_032775443;XP_032775444;XP_032775445;XP_032775446;XP_032775447;XP_032775448;XP_032775449;XP_032775450;XP_032775451 LETM1 domain-containing protein LETM2, mitochondrial protein-coding 625879836 Miga1 mitoguardin 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 3 9288673 9339163 + 22301074;30032202 116896154 MODEL JAAIVD010000012;XM_032897139;XM_032897141 XP_032753030;XP_032753032 protein-coding 625879859 Catspert catsper channel auxiliary subunit tau INVOLVED IN calcium ion transmembrane transport (ortholog); flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 68 (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog); sperm principal piece (ortholog) 4 133414866 133510076 + 116899417 MODEL JAAIVD010000003;XM_032901155 XP_032757046 C2cd6 C2 calcium dependent domain containing 6;C2 calcium-dependent domain-containing protein 6 protein-coding 625879882 LOC116889140 FANCD2 opposite strand protein-like X 29965832 29966374 - 116889140 MODEL JAAIVD010000014;XM_032890312 XP_032746203 protein-coding 625879885 Iqca1 IQ motif containing with AAA domain 1 4 162046198 162157569 - 22301074 116898262 MODEL JAAIVD010000003;XM_032899616 XP_032755507 dynein regulatory complex protein 11 protein-coding 625879908 LOC116907987 ras-specific guanine nucleotide-releasing factor 2-like 8 21868189 21872767 - 22301074;30032202 116907987 MODEL JAAIVD010000027;XM_032911231 XP_032767122 protein-coding 625879915 LOC116886813 peroxiredoxin-1-like 18 29886152 29886928 + 116886813 MODEL JAAIVD010000013 pseudo 625879916 LOC116897578 small nucleolar RNA SNORA17 3 39222802 39222938 + 116897578 MODEL JAAIVD010000012;XR_004387586 snorna 625879919 Lsmem2 leucine rich single-pass membrane protein 2 8 98909991 98914046 - 116907534 MODEL JAAIVD010000027;XM_032910552;XM_032910553 XP_032766443;XP_032766444 leucine-rich single-pass membrane protein 2 protein-coding 625879930 Cacnb1 calcium voltage-gated channel auxiliary subunit beta 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); high voltage-gated calcium channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to amyloid-beta (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 9 56362091 56382944 + 22301074;30032202 116909504 MODEL JAAIVD010000002;XM_032913109;XM_032913110 XP_032769000;XP_032769001 voltage-dependent L-type calcium channel subunit beta-1 protein-coding 625879954 LOC116888856 uncharacterized LOC116888856 X 27043846 27045361 - 116888856 MODEL JAAIVD010000014;XR_004386347 ncrna 625879959 Cldn7 claudin 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 9 49574465 49576699 + 22301074;30032202 116910568 MODEL JAAIVD010000002;XM_032914487 XP_032770378 claudin-7 protein-coding 625879967 LOC116902691 uncharacterized LOC116902691 6 40954889 40958074 + 116902691 MODEL JAAIVD010000024;XR_004388233 ncrna 625879971 LOC116906280 60S ribosomal protein L29-like 7 25319061 25319630 - 22301074;30032202 116906280 MODEL JAAIVD010000026;XM_032909164 XP_032765055 protein-coding 625879975 LOC116888737 olfactory receptor 13C3-like 1 102158320 102159273 + 22301074 116888737 MODEL JAAIVD010000025;XM_032890032 XP_032745923 protein-coding 625879978 Rad51c RAD51 paralog C ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 83364223 83389746 + 22301074;30032202 116908945 MODEL JAAIVD010000002;XM_032912402 XP_032768293 DNA repair protein RAD51 homolog 3 protein-coding 625879991 Egr1 early growth response 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to antibiotic (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Alzheimer's disease (ortholog); aortic valve stenosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 15 9495054 9499032 - 30032202 116884584 MODEL JAAIVD010000010;XM_032885725 XP_032741616 early growth response protein 1 protein-coding 625879997 LOC116902445 60S ribosomal protein L34-like 5 158585172 158585758 + 116902445 MODEL JAAIVD010000023 pseudo 625879998 LOC116915169 U6 spliceosomal RNA 13 60639665 60639770 - 116915169 MODEL JAAIVD010000008;XR_004389831 snrna 625880001 LOC116902380 uncharacterized LOC116902380 5 154461064 154465572 + 116902380 MODEL JAAIVD010000023;XR_004388063;XR_004388064 ncrna 625880008 LOC116897306 uncharacterized LOC116897306 3 205009044 205081226 + 116897306 MODEL JAAIVD010000012;XR_004387411;XR_004387412 ncrna 625880017 Fmnl2 formin like 2 INVOLVED IN cortical actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); regulation of cell morphogenesis (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 5 30629565 30897394 + 22301074;30032202 116901409 MODEL JAAIVD010000023;XM_032903288;XM_032903289 XP_032759179;XP_032759180 formin-like protein 2 protein-coding 625880052 Cntnap1 contactin associated protein 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN axonogenesis (ortholog); central nervous system myelination (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 4E (ortholog); Congenital Hypomyelinating Neuropathy 3 (ortholog); distal arthrogryposis type 1A (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); paranode region of axon (ortholog) 9 60474093 60487875 + 116910523 MODEL JAAIVD010000002;XM_032914427 XP_032770318 contactin-associated protein 1 protein-coding 625880080 LOC116883212 triosephosphate isomerase-like 14 44451752 44452539 + 116883212 MODEL JAAIVD010000009 pseudo 625880081 Rbms2 RNA binding motif single stranded interacting protein 2 1 155607955 155648437 - 22301074;30032202 116905874 MODEL JAAIVD010000025;XM_032908870;XR_004388573 XP_032764761 RNA-binding motif, single-stranded-interacting protein 2 protein-coding 625880101 LOC116907406 putative gustatory receptor clone PTE01 8 15614069 15615013 + 22301074;30032202 116907406 MODEL JAAIVD010000027;XM_032910363 XP_032766254 protein-coding 625880104 Pbx3 PBX homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dorsal spinal cord development (ortholog); neuron development (ortholog); ASSOCIATED WITH Congenital Heart Defects, Multiple Types (ortholog); esophagus squamous cell carcinoma (ortholog); X-linked cone-rod dystrophy 1 (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 5 1260615 1453402 + 22301074;30032202 116901117 MODEL JAAIVD010000023;XM_032902689;XM_032902690 XP_032758580;XP_032758581 pre-B-cell leukemia transcription factor 3 protein-coding 625880119 Myh11 myosin heavy chain 11 ENCODES a protein that exhibits cytoskeletal motor activity (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); elastic fiber assembly (ortholog); smooth muscle contraction (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); FOUND IN brush border (ortholog); muscle myosin complex (ortholog); myosin complex (ortholog) 9 7948489 8036694 + 22301074 116908978 MODEL JAAIVD010000002;XM_032912443;XM_032912444;XM_032912445;XM_032912446;XM_032912447 XP_032768334;XP_032768335;XP_032768336;XP_032768337;XP_032768338 myosin-11 protein-coding 625880180 LOC116903901 TRPM8 channel-associated factor 2-like 6 98274935 98277231 - 30032202 116903901 MODEL JAAIVD010000024;XM_032906670 XP_032762561 protein-coding 625880185 Cwf19l1 CWF19 like cell cycle control factor 1 ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 17 (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 2 43642818 43666282 - 30032202 116891207 MODEL JAAIVD010000001;XM_032892035 XP_032747926 CWF19-like protein 1 protein-coding 625880203 Sbk2 SH3 domain binding kinase family member 2 2 177538283 177544984 - 22301074;30032202 116894546 MODEL JAAIVD010000001;XM_032896254 XP_032752145 serine/threonine-protein kinase SBK2 protein-coding 625880211 Ccdc169 coiled-coil domain containing 169 3 99264146 99293318 - 116895488 MODEL JAAIVD010000012;XM_032896747 XP_032752638 coiled-coil domain-containing protein 169 protein-coding 625880223 LOC116889000 heat shock cognate 71 kDa protein-like X 13777019 13777730 - 116889000 MODEL JAAIVD010000014 pseudo 625880224 LOC116912925 U6 spliceosomal RNA 11 36671360 36671466 + 116912925 MODEL JAAIVD010000006;XR_004389496 snrna 625880227 LOC116890572 small nucleolar RNA SNORA17 1 137185014 137185138 + 116890572 MODEL JAAIVD010000025 pseudo 625880228 LOC116890583 small nucleolar RNA SNORA17 1 235829915 235830050 - 116890583 MODEL JAAIVD010000025;XR_004386745 snorna 625880231 Actr1b actin related protein 1B ASSOCIATED WITH Duane retraction syndrome (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 4 112908796 112919006 - 116899296 MODEL JAAIVD010000003;XM_032900943 XP_032756834 beta-centractin protein-coding 625880246 Mvb12b multivesicular body subunit 12B ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); ESCRT I complex (ortholog) 5 1743099 1902579 + 22301074;30032202 116901118 MODEL JAAIVD010000023;XM_032902691;XM_032902692 XP_032758582;XP_032758583 protein-coding 625880263 Hebp1 heme binding protein 1 ENCODES a protein that exhibits heme binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 6 14276869 14305592 + 116903162 MODEL JAAIVD010000024;XM_032905529 XP_032761420 heme-binding protein 1 protein-coding 625880271 Crybb3 crystallin beta B3 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 22 multiple types (ortholog); genetic disease (ortholog) 16 40897265 40902101 + 30032202 116885817 MODEL JAAIVD010000004;XM_032887160 XP_032743051 beta-crystallin B3 protein-coding 625880280 LOC116895437 uncharacterized LOC116895437 3 68458719 68463033 - 116895437 MODEL JAAIVD010000012;XR_004387276 ncrna 625880285 LOC116902704 60S ribosomal protein L13-like 6 43041710 43042237 + 22301074;30032202 116902704 MODEL JAAIVD010000024;XM_032905058 XP_032760949 protein-coding 625880288 C6H3orf22 chromosome 6 C3orf22 homolog FOUND IN cytoplasm (ortholog) 6 56600770 56605220 - 116902727 MODEL JAAIVD010000024;XM_032905077 XP_032760968 uncharacterized protein C3orf22 homolog protein-coding 625880296 LOC116911369 uncharacterized LOC116911369 10 44132457 44138362 - 116911369 MODEL JAAIVD010000005;XR_004389323 ncrna 625880300 LOC116900126 olfactory receptor 50-like 5 14442492 14443430 + 22301074;30032202 116900126 MODEL JAAIVD010000023;XM_032901900 XP_032757791 protein-coding 625880303 LOC116887848 60S ribosomal protein L17-like 1 61306666 61307206 + 116887848 MODEL JAAIVD010000025 pseudo 625880304 Slc38a12 solute carrier family 38 member 12 ASSOCIATED WITH basal cell carcinoma (ortholog) 9 68858169 68914735 - 116909689 MODEL JAAIVD010000002;XM_032913351 XP_032769242 Tmem104 transmembrane protein 104 protein-coding 625880318 LOC116905641 snurportin-1-like 7 27538467 27539626 + 116905641 MODEL JAAIVD010000026 pseudo 625880319 LOC116915129 small nucleolar RNA SNORA17 13 9873805 9873933 + 116915129 MODEL JAAIVD010000008;XR_004389809 snorna 625880322 LOC116906712 uncharacterized LOC116906712 8 59987145 59990768 - 116906712 MODEL JAAIVD010000027;XR_004388765 ncrna 625880327 Grin3b glutamate ionotropic receptor NMDA type subunit 3B ENCODES a protein that exhibits calcium channel activity (ortholog); glycine binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN cellular response to glycine (ortholog); ionotropic glutamate receptor signaling pathway (ortholog); monoatomic cation transmembrane transport (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); neuronal cell body (ortholog); neurotransmitter receptor complex (ortholog) 1 154899190 154905499 - 22301074;30032202 116905483 MODEL JAAIVD010000025;XM_032908484 XP_032764375 glutamate receptor ionotropic, NMDA 3B protein-coding 625880340 Il21 interleukin 21 ENCODES a protein that exhibits cytokine receptor binding (ortholog); interleukin-2 receptor binding (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Animal Toxoplasmosis (ortholog); anogenital venereal wart (ortholog) 3 116779438 116787031 + 30032202 116895517 MODEL JAAIVD010000012;XM_032896762 XP_032752653 interleukin-21 protein-coding 625880348 LOC116911232 60S ribosomal protein L9-like 10 23519877 23521947 - 116911232 MODEL JAAIVD010000005 pseudo 625880349 LOC116906196 Ig heavy chain V region 345-like 7 120985232 120985745 - 116906196 MODEL JAAIVD010000026 pseudo 625880350 LOC116904981 uncharacterized LOC116904981 7 50704882 50848520 + 116904981 MODEL JAAIVD010000026;XR_004388478 ncrna 625880354 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 68687717 68687789 + 116910814 MODEL JAAIVD010000002 trna 625880355 Lcorl ligand dependent nuclear receptor corepressor like ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Birth Weight (ortholog) 11 60045872 60177429 + 22301074;30032202 116912231 MODEL JAAIVD010000006;XM_032916191;XM_032916192;XM_032916193;XM_032916194;XM_032916195;XM_032916196;XM_032916197;XM_032916198;XM_032916199;XM_032916200;XM_032916202;XM_032916203;XM_032916204;XM_032916205;XM_032916206 XP_032772082;XP_032772083;XP_032772084;XP_032772085;XP_032772086;XP_032772087;XP_032772088;XP_032772089;XP_032772090;XP_032772091;XP_032772093;XP_032772094;XP_032772095;XP_032772096;XP_032772097 ligand-dependent nuclear receptor corepressor-like protein protein-coding 625880418 Armc6 armadillo repeat containing 6 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN cytosol (ortholog) 13 12481933 12496737 - 22301074;30032202 116915089 MODEL JAAIVD010000008;XM_032919515;XM_032919516 XP_032775406;XP_032775407 armadillo repeat-containing protein 6 protein-coding 625880433 LOC116909022 olfactory receptor 1468-like 9 44691334 44692272 + 22301074;30032202 116909022 MODEL JAAIVD010000002;XM_032912498 XP_032768389 protein-coding 625880436 Hspa12b heat shock protein family A (Hsp70) member 12B INVOLVED IN angiogenesis (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); pulmonary edema (ortholog) 5 110859092 110872678 + 116901983 MODEL JAAIVD010000023;XM_032904230 XP_032760121 heat shock 70 kDa protein 12B protein-coding 625880453 Cfap184 cilia and flagella associated protein 184 11 68619601 68621923 - 30032202 116912775 MODEL JAAIVD010000006;XM_032916934 XP_032772825 Ccdc96 coiled-coil domain containing 96;coiled-coil domain-containing protein 96 protein-coding 625880459 LOC116886975 peptidyl-prolyl cis-trans isomerase G-like 18 39695121 39695826 - 116886975 MODEL JAAIVD010000013 pseudo 625880460 LOC116887858 cytochrome c oxidase assembly factor 6 homolog 1 227933828 227934727 - 116887858 MODEL JAAIVD010000025 pseudo 625880461 Klhdc3 kelch domain containing 3 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN chromatin (ortholog); Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 83183715 83190048 + 22301074;30032202 116899100 MODEL JAAIVD010000003;XM_032900613;XM_032900614;XM_032900615 XP_032756504;XP_032756505;XP_032756506 kelch domain-containing protein 3 protein-coding 625880483 Mmaa metabolism of cobalamin associated A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); succinyl-CoA biosynthetic process (ortholog); ASSOCIATED WITH cataract (ortholog); Congenital Abnormalities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 17 20810866 20840221 + 22301074;30032202 116886248 MODEL JAAIVD010000011;XM_032887661;XM_032887662;XM_032887663;XM_032887664 XP_032743552;XP_032743553;XP_032743554;XP_032743555 methylmalonic aciduria type A protein, mitochondrial protein-coding 625880503 LOC116891317 transcription elongation factor SPT4-A-like 2 57224688 57225071 - 116891317 MODEL JAAIVD010000001 pseudo 625880504 Gal3st4 galactose-3-O-sulfotransferase 4 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); FOUND IN membrane (ortholog) 16 16032730 16038819 + 22301074;30032202 116885731 MODEL JAAIVD010000004;XM_032887041 XP_032742932 protein-coding 625880512 LOC116905378 serine protease inhibitor A3B-like 7 115363245 115367306 + 116905378 MODEL JAAIVD010000026 pseudo 625880513 LOC116894974 small nucleolar RNA SNORA24 2 25272830 25272961 - 116894974 MODEL JAAIVD010000001;XR_004387165 snorna 625880516 LOC116906488 small nucleolar RNA SNORD127 7 78760593 78760677 + 116906488 MODEL JAAIVD010000026;XR_004388731 snorna 625880519 LOC116893065 extensin-like 2 38035436 38036443 - 116893065 MODEL JAAIVD010000001;XM_032895024 XP_032750915 protein-coding 625880522 LOC116911568 heat shock protein HSP 90-alpha-like 10 10973656 10975437 - 116911568 MODEL JAAIVD010000005 pseudo 625880523 LOC116888268 mitochondrial import receptor subunit TOM5 homolog X 128848177 128848332 + 30032202 116888268 MODEL JAAIVD010000014;XM_032889544 XP_032745435 protein-coding 625880526 L1td1 LINE1 type transposase domain containing 1 1 55785169 55790940 - 30032202 116891828 MODEL JAAIVD010000025;XM_032893231 XP_032749122 LINE-1 type transposase domain-containing protein 1 protein-coding 625880532 LOC116889262 uncharacterized LOC116889262 X 18272553 18301951 + 116889262 MODEL JAAIVD010000014;XR_004386370 ncrna 625880537 Atp6v1a ATPase H+ transporting V1 subunit A ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IID (ortholog); brain disease (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN apical plasma membrane (ortholog); ATPase complex (ortholog); cytoplasm (ortholog) 4 28977508 29032801 - 22301074;30032202 116898859 MODEL JAAIVD010000003;XM_032900224 XP_032756115 V-type proton ATPase catalytic subunit A protein-coding 625880556 Sftpd surfactant protein D ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN lung alveolus development (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of phagocytosis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; surfactant homeostasis pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); multivesicular body (ortholog) 13 19689837 19703507 - 116914597 MODEL JAAIVD010000008;XM_032918958 XP_032774849 pulmonary surfactant-associated protein D protein-coding 625880568 LOC116893968 uncharacterized LOC116893968 2 99336776 99338538 - 116893968 MODEL JAAIVD010000001;XR_004387019 ncrna 625880573 LOC116910965 glyceraldehyde-3-phosphate dehydrogenase-like 10 85133477 85135465 + 116910965 MODEL JAAIVD010000005 pseudo 625880574 LOC116885674 60S ribosomal protein L19-like 16 28092444 28096027 + 116885674 MODEL JAAIVD010000004 pseudo 625880575 LOC116913031 small nucleolar RNA U3 11 49815279 49815349 + 116913031 MODEL JAAIVD010000006 pseudo 625880576 LOC116888309 uncharacterized LOC116888309 X 31954958 31967890 - 116888309 MODEL JAAIVD010000014;XR_004386302 ncrna 625880581 LOC116897625 small nucleolar RNA SNORD78 3 222789449 222789514 + 116897625 MODEL JAAIVD010000012;XR_004387606 snorna 625880584 Dnajc25 DnaJ heat shock protein family (Hsp40) member C25 1 92417900 92437460 - 30032202 116901553 MODEL JAAIVD010000025;XM_032903548 XP_032759439 dnaJ homolog subfamily C member 25 protein-coding 625880592 LOC116890957 60S ribosomal protein L36a-like 2 9985513 9985929 + 22301074;30032202 116890957 MODEL JAAIVD010000001;XM_032891614 XP_032747505 protein-coding 625880597 Zg16 zymogen granule protein 16 ENCODES a protein that exhibits peptidoglycan binding (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); suppression of symbiont entry into host (ortholog); FOUND IN extracellular space (ortholog); Golgi lumen (ortholog); mucus layer (ortholog) 2 74842528 74844961 + 30032202 116891487 MODEL JAAIVD010000001;XM_032892592 XP_032748483 zymogen granule membrane protein 16 protein-coding 625880605 KEG97_t08 tRNA-Ala MT 5005 5073 - 64988241 trna 625880606 LOC116894082 olfactory receptor 52E1-like 2 103190183 103191121 + 22301074 116894082 MODEL JAAIVD010000001;XM_032895803 XP_032751694 protein-coding 625880609 Slc25a45 solute carrier family 25 member 45 ASSOCIATED WITH melanoma (ortholog) 2 1810708 1818247 - 22301074;30032202 116890692 MODEL JAAIVD010000001;XM_032891110 XP_032747001 protein-coding 625880619 LOC116908112 olfactory receptor 7D4-like 8 16781861 16785075 + 22301074;30032202 116908112 MODEL JAAIVD010000027;XM_032911393 XP_032767284 protein-coding 625880624 Znf451 zinc finger protein 451 ENCODES a protein that exhibits SUMO ligase activity (ortholog); transcription corepressor activity (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription initiation by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); protein sumoylation (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 4 110012171 110066854 - 30032202 116899268 MODEL JAAIVD010000003;XM_032900889;XM_032900890;XM_032900891 XP_032756780;XP_032756781;XP_032756782 E3 SUMO-protein ligase ZNF451 protein-coding 625880649 LOC116911986 ribosome biogenesis protein NSA2 homolog 11 44739387 44751773 - 116911986 MODEL JAAIVD010000006 pseudo 625880650 LOC116910919 mucosal pentraxin-like 10 52310653 52313780 - 30032202 116910919 MODEL JAAIVD010000005;XM_032914673 XP_032770564 protein-coding 625880654 LOC116892585 60S ribosomal protein L7a-like 2 171983230 171984057 + 116892585 MODEL JAAIVD010000001 pseudo 625880655 LOC116895968 WD repeat-containing protein 75-like 3 149095814 149101002 + 116895968 MODEL JAAIVD010000012 pseudo 625880656 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42441239 42441312 - 116884184 MODEL JAAIVD010000009 trna 625880657 Csnk1g2 casein kinase 1 gamma 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway 1 154247407 154253628 - 22301074;30032202 116904966 MODEL JAAIVD010000025;XM_032907631;XM_032907642;XM_032907651;XM_032907658;XM_032907662 XP_032763522;XP_032763533;XP_032763542;XP_032763549;XP_032763553 casein kinase I protein-coding 625880680 LOC116891869 protein Tob2-like 2 13406230 13407379 + 116891869 MODEL JAAIVD010000001 pseudo 625880681 Xkr6 XK related 6 FOUND IN plasma membrane (ortholog) 12 60582294 60785575 - 30032202 116914037 MODEL JAAIVD010000007;XM_032918317 XP_032774208 XK-related protein 6 protein-coding 625880688 LOC116901525 60S ribosomal protein L19-like 5 51174697 51175276 + 116901525 MODEL JAAIVD010000023 pseudo 625880689 Fundc1 FUN14 domain containing 1 INVOLVED IN autophagy of mitochondrion (ortholog); mitochondrial fusion (ortholog); mitophagy (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH Hypoxia (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 4663804 4679310 - 30032202 116888756 MODEL JAAIVD010000014;XM_032890050 XP_032745941 FUN14 domain-containing protein 1 protein-coding 625880698 Lnx2 ligand of numb-protein X 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); FOUND IN plasma membrane (ortholog) 16 6794556 6858557 + 22301074;30032202 116885184 MODEL JAAIVD010000004;XM_032886399;XM_032886400;XM_032886401;XM_032886402 XP_032742290;XP_032742291;XP_032742292;XP_032742293 ligand of Numb protein X 2 protein-coding 625880719 LOC116887761 U6 spliceosomal RNA 18 23804072 23804182 + 116887761 MODEL JAAIVD010000013;XR_004386261 snrna 625880722 Egfr epidermal growth factor receptor ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cell morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; cetuximab pharmacodynamics pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) 11 85178228 85342818 + 22301074;30032202 116912206 MODEL JAAIVD010000006;XM_032916153 XP_032772044 protein-coding 625880754 LOC116895378 60S ribosomal protein L15-like 3 55031291 55031889 + 116895378 MODEL JAAIVD010000012 pseudo 625880755 Ptprg protein tyrosine phosphatase receptor type G ENCODES a protein that exhibits identical protein binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of epithelial cell migration (ortholog); negative regulation of neuron projection development (ortholog); regulation of homophilic cell adhesion (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN extracellular space (ortholog) 12 81653555 82324582 + 22301074 116913717 MODEL JAAIVD010000007;XM_032918016;XM_032918017 XP_032773907;XP_032773908 receptor-type tyrosine-protein phosphatase gamma protein-coding 625880792 LOC116913002 small nucleolar RNA SNORA17 11 93767422 93767529 + 116913002 MODEL JAAIVD010000006 pseudo 625880793 LOC116894394 keratin-associated protein 20-2-like 2 157157517 157157666 + 116894394 MODEL JAAIVD010000001;XM_032896102 XP_032751993 protein-coding 625880796 Mecp2 methyl-CpG binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); behavioral fear response (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH Angelman syndrome (ortholog); Animal Disease Models (ortholog); anxiety disorder (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) X 128480073 128534447 + 22301074;30032202 116888366 MODEL JAAIVD010000014;XM_032889633;XM_032889634;XM_032889635 XP_032745524;XP_032745525;XP_032745526 methyl-CpG-binding protein 2 protein-coding 625880810 Clasp2 cytoplasmic linker associated protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); dystroglycan binding (ortholog); microtubule binding (ortholog); INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); cellular response to insulin stimulus (ortholog); FOUND IN axonal growth cone (ortholog); basal cortex (ortholog); cell cortex (ortholog) 8 104602868 104785472 + 30032202 116907804 MODEL JAAIVD010000027;XM_032910949;XM_032910950;XM_032910952;XM_032910953;XM_032910954;XM_032910955;XM_032910956;XM_032910957;XM_032910958;XM_032910959;XM_032910960;XM_032910961;XM_032910962;XM_032910963;XM_032910964;XM_032910965;XM_032910966;XM_032910968;XM_032910969;XM_032910970;XM_032910971;XM_032910972;XM_032910973;XM_032910974;XM_032910975;XM_032910976;XM_032910977 XP_032766840;XP_032766841;XP_032766843;XP_032766844;XP_032766845;XP_032766846;XP_032766847;XP_032766848;XP_032766849;XP_032766850;XP_032766851;XP_032766852;XP_032766853;XP_032766854;XP_032766855;XP_032766856;XP_032766857;XP_032766859;XP_032766860;XP_032766861;XP_032766862;XP_032766863;XP_032766864;XP_032766865;XP_032766866;XP_032766867;XP_032766868 CLIP-associating protein 2 protein-coding 625880901 LOC116913920 neugrin-like 12 29604825 29605569 - 116913920 MODEL JAAIVD010000007 pseudo 625880902 LOC116885088 U6 spliceosomal RNA 15 67380895 67380998 + 116885088 MODEL JAAIVD010000010;XR_004385959 snrna 625880905 Cttn cortactin ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); profilin binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); Leukoplakia (ortholog); squamous cell carcinoma (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell junction (ortholog) 2 5258955 5289210 + 30032202 116890823 MODEL JAAIVD010000001;XM_032891327;XM_032891328;XM_032891330 XP_032747218;XP_032747219;XP_032747221 src substrate cortactin protein-coding 625880928 Anapc15 anaphase promoting complex subunit 15 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) 2 100166687 100194049 + 22301074;30032202 116891774 MODEL JAAIVD010000001;XM_032893104;XM_032893105;XM_032893107;XM_032893108;XM_032893109;XM_032893110;XM_032893111;XM_032893112;XM_032893113;XM_032893114;XM_032893115;XM_032893116 XP_032748995;XP_032748996;XP_032748998;XP_032748999;XP_032749000;XP_032749001;XP_032749002;XP_032749003;XP_032749004;XP_032749005;XP_032749006;XP_032749007 anaphase-promoting complex subunit 15 protein-coding 625880967 Ncr3 natural cytotoxicity triggering receptor 3 ENCODES a protein that exhibits identical protein binding (ortholog); immune receptor activity (ortholog); INVOLVED IN immune response-activating cell surface receptor signaling pathway (ortholog); natural killer cell activation (ortholog); NK T cell activation (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 18 7777747 7782863 + 30032202 116887127 MODEL JAAIVD010000013;XM_032888674 XP_032744565 protein-coding 625880975 Znf133 zinc finger protein 133 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 5 124096177 124113541 + 22301074;30032202 116902045 MODEL JAAIVD010000023;XM_032904330 XP_032760221 protein-coding 625880982 Tnfrsf13c TNF receptor superfamily member 13C INVOLVED IN B cell costimulation (ortholog); B cell homeostasis (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); FOUND IN external side of plasma membrane (ortholog) 1 251951579 251952857 - 22301074;30032202 116890157 MODEL JAAIVD010000025;XM_032890891;XM_032890892 XP_032746782;XP_032746783 tumor necrosis factor receptor superfamily member 13C protein-coding 625880991 LOC116886965 SUMO-conjugating enzyme UBC9-like 18 34813965 34822962 + 116886965 MODEL JAAIVD010000013 pseudo 625880992 C8H19orf38 chromosome 8 C19orf38 homolog 8 17797966 17815068 + 116907290 MODEL JAAIVD010000027;XM_032910239 XP_032766130 protein HIDE1 protein-coding 625881002 Ssc5d scavenger receptor cysteine rich family member with 5 domains ENCODES a protein that exhibits extracellular matrix binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN defense response (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 2 177510492 177527669 + 22301074 116893447 MODEL JAAIVD010000001;XM_032895215 XP_032751106 soluble scavenger receptor cysteine-rich domain-containing protein SSC5D protein-coding 625881019 Cnot9 CCR4-NOT transcription complex subunit 9 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog); protein-containing complex (ortholog) 4 147949738 147973790 + 30032202 116899503 MODEL JAAIVD010000003;XM_032901347;XM_032901348 XP_032757238;XP_032757239 protein-coding 625881036 Hbp1 HMG-box transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of lipid transport (ortholog); negative regulation of reactive oxygen species biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 7 45319058 45343958 - 22301074;30032202 116904954 MODEL JAAIVD010000026;XM_032907610;XM_032907611 XP_032763501;XP_032763502 HMG box-containing protein 1 protein-coding 625881056 Ndn necdin, MAGE family member ENCODES a protein that exhibits gamma-tubulin binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN axon extension (ortholog); axonal fasciculation (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); Birth Weight (ortholog); FOUND IN cell projection (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 137595414 137597068 - 30032202 116892017 MODEL JAAIVD010000001;XM_032893480 XP_032749371 necdin protein-coding 625881061 LOC116895523 ribosome biogenesis protein NSA2 homolog 3 120082444 120083286 + 116895523 MODEL JAAIVD010000012 pseudo 625881062 LOC116889877 prefoldin subunit 1-like 1 156093255 156093597 + 116889877 MODEL JAAIVD010000025 pseudo 625881063 Aqp11 aquaporin 11 ENCODES a protein that exhibits glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); glycerol transmembrane transport (ortholog); hydrogen peroxide transmembrane transport (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 96051846 96062029 - 22301074;30032202 116891707 MODEL JAAIVD010000001;XM_032892972 XP_032748863 aquaporin-11 protein-coding 625881070 LOC116902652 U4 spliceosomal RNA 5 137910036 137910177 - 116902652 MODEL JAAIVD010000023;XR_004388217 snrna 625881073 LOC116900013 E3 ubiquitin-protein ligase RNF138-like 5 10402192 10402848 + 116900013 MODEL JAAIVD010000023 pseudo 625881074 LOC116889736 phosphate import ATP-binding protein PstB-like 22301074;30032202 116889736 MODEL JAAIVD010000071;XM_032890608 XP_032746499 protein-coding 625881075 LOC116909104 caspase-14-like 9 867640 871966 - 22301074 116909104 MODEL JAAIVD010000002;XM_032912579 XP_032768470 protein-coding 625881086 Vps35 VPS35 retromer complex component ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); lysosome organization (ortholog); mitochondrial fragmentation involved in apoptotic process (ortholog); PARTICIPATES IN altered retromer-mediated pathway; Parkinson's disease pathway; retromer-mediated pathway; ASSOCIATED WITH genetic disease (ortholog); late onset Parkinson's disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) 17 14458041 14492740 + 22301074;30032202 116886042 MODEL JAAIVD010000011;XM_032887347 XP_032743238 vacuolar protein sorting-associated protein 35 protein-coding 625881107 LOC116913729 olfactory receptor 11H7-like 12 72587087 72588030 - 116913729 MODEL JAAIVD010000007 pseudo 625881108 Frmd6 FERM domain containing 6 INVOLVED IN apical constriction (ortholog); intracellular protein localization (ortholog); regulation of actin filament-based process (ortholog); FOUND IN apical junction complex (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 7 84532594 84568379 + 22301074;30032202 116905135 MODEL JAAIVD010000026;XM_032907895;XM_032907897 XP_032763786;XP_032763788 FERM domain-containing protein 6 protein-coding 625881127 Lrrc58 leucine rich repeat containing 58 4 22832806 22846229 + 22301074 116898836 MODEL JAAIVD010000003;XM_032900189 XP_032756080 leucine-rich repeat-containing protein 58 protein-coding 625881135 LOC116907346 olfactory receptor 151-like 8 33895799 33906674 - 116907346 MODEL JAAIVD010000027 pseudo 625881136 Bad BCL2 associated agonist of cell death ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); lipid binding (ortholog); INVOLVED IN ADP metabolic process (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN BAD-BCL-2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 844289 853573 - 22301074;30032202 116894816 MODEL JAAIVD010000001;XM_032896485;XM_032896486 XP_032752376;XP_032752377 bcl2-associated agonist of cell death protein-coding 625881147 Prr27 proline rich 27 11 1114140 1126852 - 30032202 116912633 MODEL JAAIVD010000006;XM_032916750 XP_032772641 proline-rich protein 27 protein-coding 625881155 LOC116899790 small nucleolar RNA SNORA71 4 38611640 38611772 + 116899790 MODEL JAAIVD010000003;XR_004387796 snorna 625881158 LOC116902584 small nucleolar RNA SNORA17 5 30286214 30286340 + 116902584 MODEL JAAIVD010000023;XR_004388176 snorna 625881161 LOC116906037 D-3-phosphoglycerate dehydrogenase-like 7 39657608 39659071 - 116906037 MODEL JAAIVD010000026 pseudo 625881162 LOC116884336 high mobility group protein B1-like 15 52675962 52676577 - 116884336 MODEL JAAIVD010000010 pseudo 625881163 LOC116913284 60 kDa heat shock protein, mitochondrial-like 12 88695228 88731560 + 22301074;30032202 116913284 MODEL JAAIVD010000007;XM_032917412 XP_032773303 protein-coding 625881168 LOC116911757 prohibitin-like 10 74361935 74362751 + 116911757 MODEL JAAIVD010000005 pseudo 625881169 Slbp stem-loop histone mRNA binding protein ENCODES a protein that exhibits histone pre-mRNA stem-loop binding (ortholog); identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); mRNA transport (ortholog); ASSOCIATED WITH coloboma (ortholog); optic atrophy (ortholog); Retinal Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone mRNA stem-loop binding complex (ortholog) 11 71188314 71198481 + 30032202 116912590 MODEL JAAIVD010000006;XM_032916708 XP_032772599 histone RNA hairpin-binding protein;stem-loop binding protein protein-coding 625881181 Znf76 zinc finger protein 76 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 18 5651840 5680922 - 30032202 116886864 MODEL JAAIVD010000013;XM_032888319;XM_032888320 XP_032744210;XP_032744211 protein-coding 625881202 Dhx15 DEAH-box helicase 15 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); epilepsy (ortholog); FOUND IN nuclear speck (ortholog); U12-type spliceosomal complex (ortholog); U2-type post-mRNA release spliceosomal complex (ortholog) 11 53946497 53984134 + 22301074;30032202 116912821 MODEL JAAIVD010000006;XM_032917002 XP_032772893 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 protein-coding 625881220 Ctsd cathepsin D ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); aspartic-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN ceramide signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) 2 7091289 7103344 + 22301074;30032202 116890847 MODEL JAAIVD010000001;XM_032891390 XP_032747281 protein-coding 625881233 Slf1 SMC5/6 complex localization factor 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear inclusion body (ortholog) 3 219750995 219838565 + 22301074;30032202 116897349 MODEL JAAIVD010000012;XM_032899107 XP_032754998 SMC5-SMC6 complex localization factor 1;SMC5-SMC6 complex localization factor protein 1 protein-coding 625881258 Zbtb18 zinc finger and BTB domain containing 18 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); hippocampus development (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 22 (ortholog); Developmental Disabilities (ortholog); FOUND IN heterochromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 10 55961185 55969474 + 22301074;30032202 116911000 MODEL JAAIVD010000005;XM_032914718;XM_032914719;XM_032914720;XM_032914721;XM_032914722;XM_032914724;XM_032914725;XM_032914726 XP_032770609;XP_032770610;XP_032770611;XP_032770612;XP_032770613;XP_032770615;XP_032770616;XP_032770617 zinc finger and BTB domain-containing protein 18 protein-coding 625881290 LOC116897452 U6 spliceosomal RNA 3 1954382 1954482 + 116897452 MODEL JAAIVD010000012 pseudo 625881291 LOC116896117 small proline-rich protein 2I-like 3 807547 807765 + 22301074 116896117 MODEL JAAIVD010000012;XM_032897080 XP_032752971 protein-coding 625881294 LOC116906455 small nucleolar RNA SNORA17 7 59315084 59315216 + 116906455 MODEL JAAIVD010000026;XR_004388711 snorna 625881297 Zbtb6 zinc finger and BTB domain containing 6 FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 5 15193001 15211523 - 22301074;30032202 116901354 MODEL JAAIVD010000023;XM_032903204;XM_032903205 XP_032759095;XP_032759096 zinc finger and BTB domain-containing protein 6 protein-coding 625881306 LOC116904714 small nucleolar RNA SNORA17 6 96780525 96780654 - 116904714 MODEL JAAIVD010000024;XR_004388408 snorna 625881309 Necap1 NECAP endocytosis associated 1 INVOLVED IN endocytosis (ortholog); presynaptic endocytosis (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 21 (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN clathrin vesicle coat (ortholog); clathrin-coated pit (ortholog); presynapse (ortholog) 6 24214058 24227920 - 22301074;30032202 116903306 MODEL JAAIVD010000024;XM_032905733 XP_032761624 adaptin ear-binding coat-associated protein 1 protein-coding 625881321 Rtl6 retrotransposon Gag like 6 ASSOCIATED WITH substance-related disorder (ortholog) 1 253945473 253950568 - 116914555 MODEL JAAIVD010000025;XM_032918909 XP_032774800 retrotransposon Gag-like protein 6 protein-coding 625881326 Galntl6 polypeptide N-acetylgalactosaminyltransferase like 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via threonine (ortholog) 13 30000483 31121571 + 30032202 116914788 MODEL JAAIVD010000008;XM_032919234 XP_032775125 polypeptide N-acetylgalactosaminyltransferase-like 6 protein-coding 625881342 LOC116904456 protein SET-like 6 130683439 130686677 - 116904456 MODEL JAAIVD010000024 pseudo 625881343 Rab21 RAB21, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of early endosome to late endosome transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); endosome (ortholog) 1 193443644 193471399 - 22301074 116909015 MODEL JAAIVD010000025;XM_032912492 XP_032768383 ras-related protein Rab-21 protein-coding 625881354 LOC116893122 proteasome activator complex subunit 2-like 2 74803050 74803745 - 116893122 MODEL JAAIVD010000001 pseudo 625881355 Acta2 actin alpha 2, smooth muscle ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); glomerular mesangial cell development (ortholog); juxtaglomerular apparatus development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic dissection (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) 2 33843965 33854096 - 3375082 116891101 MODEL JAAIVD010000001;X06801;XM_032891814 CAA29957;XP_032747705 AA 1-377;actin, aortic smooth muscle;vascular alpha-actin protein-coding 625881367 Esyt2 extended synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); identical protein binding (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 7 119686542 119780712 - 22301074 116905402 MODEL JAAIVD010000026;XM_032908358;XM_032908359;XM_032908360;XM_032908361 XP_032764249;XP_032764250;XP_032764251;XP_032764252 extended synaptotagmin-2 protein-coding 625881402 LOC116887915 CDGSH iron-sulfur domain-containing protein 3, mitochondrial-like X 55310020 55310615 - 116887915 MODEL JAAIVD010000014 pseudo 625881403 Zwint ZW10 interacting kinetochore protein INVOLVED IN establishment of localization in cell (ortholog); homologous chromosome orientation in meiotic metaphase I (ortholog); mitotic sister chromatid segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 18 14328491 14331050 - 22301074;30032202 116886949 MODEL JAAIVD010000013;XM_032888448 XP_032744339 ZW10 interactor protein-coding 625881414 LOC116913489 kelch repeat and BTB domain-containing protein 7-like 12 44892096 44893733 - 22301074 116913489 MODEL JAAIVD010000007;XM_032917689 XP_032773580 protein-coding 625881418 LOC116888941 hypoxanthine-guanine phosphoribosyltransferase-like X 2573765 2578249 + 116888941 MODEL JAAIVD010000014 pseudo 625881419 Ulk1 unc-51 like autophagy activating kinase 1 ENCODES a protein that exhibits GTPase binding (ortholog); Hsp90 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon extension (ortholog); PARTICIPATES IN autophagy pathway; mitochondrial autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH metabolic dysfunction-associated steatohepatitis (ortholog); mucositis (ortholog); Osteoarthritis, Experimental (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 16 43533436 43560100 + 22301074;30032202 116885322 MODEL JAAIVD010000004;XM_032886586;XM_032886587 XP_032742477;XP_032742478 serine/threonine-protein kinase ULK1 protein-coding 625881453 Asb3 ankyrin repeat and SOCS box containing 3 11 98489395 98547124 + 22301074;30032202 116912511 MODEL JAAIVD010000006;XM_032916598 XP_032772489 ankyrin repeat and SOCS box protein 3 protein-coding 625881467 Agbl4 AGBL carboxypeptidase 4 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN anterograde axonal transport of mitochondrion (ortholog); axonal transport (ortholog); C-terminal protein deglutamylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); prostate cancer (ortholog); substance-related disorder (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 1 43084137 44333848 + 22301074 116898919 MODEL JAAIVD010000025;XM_032900331 XP_032756222 ATP/GTP binding protein like 4;cytosolic carboxypeptidase 6 protein-coding 625881484 Cebpzos CEBPZ opposite strand FOUND IN mitochondrion (ortholog) 7 14311940 14316590 - 116905896 MODEL JAAIVD010000026;XM_032908885;XM_032908886;XM_032908887 XP_032764776;XP_032764777;XP_032764778 protein CEBPZOS protein-coding 625881499 Lrg1 leucine rich alpha-2-glycoprotein 1 ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); type I transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); keratinocyte migration (ortholog); leukocyte adhesion to vascular endothelial cell (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Colonic Neoplasms (ortholog); Drug Hypersensitivity Syndrome (ortholog); FOUND IN extracellular space (ortholog) 4 87508474 87510741 - 22301074;30032202 116899171 MODEL JAAIVD010000003;XM_032900740 XP_032756631 leucine-rich alpha-2-glycoprotein protein-coding 625881505 Cplx2 complexin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); SNARE binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN positive regulation of synaptic plasticity (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); psychotic disorder (ortholog); schizophrenia (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 14 72666583 72739209 + 22301074;30032202 116883278 MODEL JAAIVD010000009;XM_032884266;XM_032884267;XM_032884268 XP_032740157;XP_032740158;XP_032740159 complexin-2 protein-coding 625881518 LOC116908270 prohibitin-like 8 111114716 111116309 - 22301074;30032202 116908270 MODEL JAAIVD010000027;XM_032911519 XP_032767410 protein-coding 625881522 Shoc2 SHOC2 leucine rich repeat scaffold protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cellular response to growth hormone stimulus (ortholog); negative regulation of neural precursor cell proliferation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); familial hypertrophic cardiomyopathy (ortholog); Funnel Chest (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 53382232 53464612 + 22301074 116891290 MODEL JAAIVD010000001;XM_032892195;XM_032892196 XP_032748086;XP_032748087 leucine-rich repeat protein SHOC-2 protein-coding 625881538 LOC116904428 inosine-5'-monophosphate dehydrogenase 2-like 6 115061237 115062786 - 116904428 MODEL JAAIVD010000024 pseudo 625881539 Dsn1 DSN1 component of MIS12 kinetochore complex INVOLVED IN skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); kinetochore (ortholog) 5 136333158 136343156 - 22301074;30032202 116902215 MODEL JAAIVD010000023;XM_032904615;XM_032904617;XM_032904618 XP_032760506;XP_032760508;XP_032760509 kinetochore-associated protein DSN1 homolog protein-coding 625881560 Oca2 OCA2 melanosomal transmembrane protein ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN cell population proliferation (ortholog); developmental pigmentation (ortholog); lysosomal lumen pH elevation (ortholog); ASSOCIATED WITH actinic keratosis (ortholog); Albinism (ortholog); basal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) 2 142668100 142961049 - 22301074;30032202 116894306 MODEL JAAIVD010000001;XM_032896002;XM_032896003 XP_032751893;XP_032751894 P protein protein-coding 625881591 Nek5 NIMA related kinase 5 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of striated muscle cell differentiation (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) 13 64304715 64348172 + 22301074;30032202 116914539 MODEL JAAIVD010000008;XM_032918870 XP_032774761 serine/threonine-protein kinase Nek5 protein-coding 625881613 LOC116884134 U6 spliceosomal RNA 14 62883898 62884006 + 116884134 MODEL JAAIVD010000009;XR_004385857 snrna 625881616 LOC116910612 olfactory receptor 2T2-like 9 39753255 39754208 + 22301074 116910612 MODEL JAAIVD010000002;XM_032914559 XP_032770450 protein-coding 625881619 LOC116904928 gem-associated protein 8-like 7 76186612 76187298 + 116904928 MODEL JAAIVD010000026 pseudo 625881620 Lage3 L antigen family member 3 ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); EKC/KEOPS complex (ortholog); nuclear body (ortholog) X 128358559 128359993 - 30032202 116889164 MODEL JAAIVD010000014;XM_032890332 XP_032746223 EKC/KEOPS complex subunit LAGE3 protein-coding 625881627 LOC116895710 UBX domain-containing protein 1-like 3 215397929 215398865 + 116895710 MODEL JAAIVD010000012 pseudo 625881628 LOC116913009 small nucleolar RNA SNORA26 11 30878340 30878460 + 116913009 MODEL JAAIVD010000006;XR_004389563 snorna 625881631 Wdr91 WD repeat domain 91 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); regulation of protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) 6 104744496 104774368 + 22301074;30032202 116903970 MODEL JAAIVD010000024;XM_032906770 XP_032762661 WD repeat-containing protein 91 protein-coding 625881650 LOC116897436 U6 spliceosomal RNA 3 120325971 120326073 - 116897436 MODEL JAAIVD010000012;XR_004387475 snrna 625881653 LOC116910388 E3 SUMO-protein ligase NSE2-like 9 91554666 91555871 + 116910388 MODEL JAAIVD010000002 pseudo 625881654 Mutyh mutY DNA glycosylase ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); MutLalpha complex binding (ortholog); MutLbeta complex binding (ortholog); INVOLVED IN negative regulation of necroptotic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 40451042 40455829 + 22301074;30032202 116898510 MODEL JAAIVD010000025;XM_032899741 XP_032755632 adenine DNA glycosylase protein-coding 625881673 Cfap96 cilia and flagella associated protein 96 ASSOCIATED WITH developmental and epileptic encephalopathy 1 (ortholog); intellectual disability (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic microtubule (ortholog) 13 41916101 41940866 + 30032202 116914415 MODEL JAAIVD010000008;XM_032918675;XM_032918676 XP_032774566;XP_032774567 C13H4orf47 UPF0602 protein C4orf47 homolog;chromosome 13 C4orf47 homolog protein-coding 625881688 LOC116891516 sulfotransferase 1A1 2 75228188 75230886 + 22301074;30032202 116891516 MODEL JAAIVD010000001;XM_032892654 XP_032748545 protein-coding 625881699 Purb purine rich element binding protein B ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 11 75400982 75405474 - 22301074;30032202 116912907 MODEL JAAIVD010000006;XM_032917165 XP_032773056 transcriptional activator protein Pur-beta protein-coding 625881704 LOC116901807 uncharacterized LOC116901807 5 97499767 97505496 - 116901807 MODEL JAAIVD010000023;XM_032903967;XR_004388024 XP_032759858 uncharacterized protein LOC116901807 protein-coding 625881714 LOC116907552 nucleoside diphosphate kinase B-like 8 89905926 89906387 - 22301074;30032202 116907552 MODEL JAAIVD010000027;XM_032910574 XP_032766465 protein-coding 625881717 Tmem30a transmembrane protein 30A ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); structural molecule activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); phospholipid translocation (ortholog); positive regulation of neuron projection development (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); late endosome membrane (ortholog) 8 74040659 74064398 - 30032202 116906563 MODEL JAAIVD010000027;XM_032909276 XP_032765167 cell cycle control protein 50A protein-coding 625881728 LOC116911945 elongation factor 1-alpha 1-like 11 57399046 57400573 - 116911945 MODEL JAAIVD010000006 pseudo 625881729 LOC116895869 proteasomal ubiquitin receptor ADRM1-like 3 104119027 104120171 - 116895869 MODEL JAAIVD010000012 pseudo 625881730 LOC116888123 ribosome biogenesis protein NSA2 homolog 1 70356979 70357907 - 116888123 MODEL JAAIVD010000025 pseudo 625881731 LOC116883350 cyclic AMP-dependent transcription factor ATF-7 1 260464488 260552506 + 30032202 116883350 MODEL JAAIVD010000025;XM_032884432 XP_032740323 protein-coding 625881747 LOC116889136 60S ribosomal protein L39-like 1 4230830 4231020 - 22301074;30032202 116889136 MODEL JAAIVD010000025;XM_032890310 XP_032746201 protein-coding 625881751 LOC116905152 40S ribosomal protein S10-like 7 85948295 85948825 - 116905152 MODEL JAAIVD010000026 pseudo 625881752 LOC116892981 zinc finger protein 501-like 1 63972267 63979639 + 30032202 116892981 MODEL JAAIVD010000025;XM_032894973 XP_032750864 protein-coding 625881757 LOC116889455 U1 spliceosomal RNA X 70530271 70530424 - 116889455 MODEL JAAIVD010000014 pseudo 625881758 Znhit6 zinc finger HIT-type containing 6 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); protein complex oligomerization (ortholog); snoRNA localization (ortholog); FOUND IN pre-snoRNP complex (ortholog) 3 15276419 15304312 - 30032202 116896181 MODEL JAAIVD010000012;XM_032897220 XP_032753111 box C/D snoRNA protein 1 protein-coding 625881771 LOC116914936 anthrax toxin receptor-like 13 9756612 9787076 - 22301074 116914936 MODEL JAAIVD010000008;XM_032919362 XP_032775253 protein-coding 625881790 LOC116885883 vomeronasal type-2 receptor 116-like 16 15029406 15036538 + 22301074;30032202 116885883 MODEL JAAIVD010000004;XM_032887203 XP_032743094 protein-coding 625881797 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 48212412 48212484 - 116913059 MODEL JAAIVD010000006 trna 625881798 Bub1b BUB1 mitotic checkpoint serine/threonine kinase B INVOLVED IN metaphase/anaphase transition of mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); protein localization to chromosome, centromeric region (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); cerebral palsy (ortholog); colon carcinoma (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 96746249 96793898 + 22301074;30032202 116901781 MODEL JAAIVD010000023;XM_032903922;XM_032903923 XP_032759813;XP_032759814 mitotic checkpoint serine/threonine-protein kinase BUB1 beta protein-coding 625881828 LOC116906203 40S ribosomal protein S23-like 1 155985268 155985916 - 116906203 MODEL JAAIVD010000025 pseudo 625881829 LOC116899914 small nucleolar RNA SNORA84 4 28785988 28786121 - 116899914 MODEL JAAIVD010000003;XR_004387886 snorna 625881832 LOC116883895 elongation factor Tu, mitochondrial-like 14 41749401 41750600 + 116883895 MODEL JAAIVD010000009 pseudo 625881833 LOC116909183 60S ribosomal protein L10a-like 9 69935425 69936086 + 116909183 MODEL JAAIVD010000002;XR_004389056 pseudo 625881836 Chit1 chitinase 1 ENCODES a protein that exhibits chitinase activity (ortholog); endochitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH CHITOTRIOSIDASE DEFICIENCY (ortholog); Gaucher's disease (ortholog); FOUND IN extracellular space (ortholog) 10 1531168 1579037 - 22301074;30032202 116911179 MODEL JAAIVD010000005;XM_032915043;XM_032915045;XM_032915046 XP_032770934;XP_032770936;XP_032770937 chitotriosidase-1 protein-coding 625881860 LOC116895904 filaggrin-like 3 120552403 120557932 - 22301074;30032202 116895904 MODEL JAAIVD010000012;XM_032896987 XP_032752878 protein-coding 625881865 LOC116910312 NACHT, LRR and PYD domains-containing protein 1a-like 9 50739321 50749473 - 30032202 116910312 MODEL JAAIVD010000002;XM_032914176 XP_032770067 protein-coding 625881872 LOC116886705 uncharacterized LOC116886705 17 25874999 25881715 + 116886705 MODEL JAAIVD010000011;XR_004386126 ncrna 625881877 LOC116913931 40S ribosomal protein SA-like 12 36709369 36718136 - 116913931 MODEL JAAIVD010000007 pseudo 625881878 Nek9 NIMA related kinase 9 ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mitotic cell cycle (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH ARTHROGRYPOSIS, PERTHES DISEASE, AND UPWARD GAZE PALSY (ortholog); cleft palate (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog) 7 99404235 99445222 - 22301074;30032202 116905293 MODEL JAAIVD010000026;XM_032908162;XM_032908163 XP_032764053;XP_032764054 serine/threonine-protein kinase Nek9 protein-coding 625881908 LOC116883429 serpin B6-like 14 51991997 52004535 + 30032202 116883429 MODEL JAAIVD010000009;XM_032884565 XP_032740456 protein-coding 625881918 Arrdc2 arrestin domain containing 2 FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 13 13078317 13082174 - 30032202 116914754 MODEL JAAIVD010000008;XM_032919203;XM_032919204 XP_032775094;XP_032775095 arrestin domain-containing protein 2 protein-coding 625881934 LOC116914181 U6 spliceosomal RNA 12 13078257 13078360 + 116914181 MODEL JAAIVD010000007;XR_004389724 snrna 625881937 Fndc7 fibronectin type III domain containing 7 3 49383885 49419010 + 22301074 116895359 MODEL JAAIVD010000012;XM_032896656 XP_032752547 fibronectin type III domain-containing protein 7 protein-coding 625881953 Ebf1 EBF transcription factor 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); follicular lymphoma (ortholog); lipodystrophy (ortholog); FOUND IN nucleus (ortholog) 9 27435767 27822514 + 30032202 116909614 MODEL JAAIVD010000002;XM_032913237;XM_032913238 XP_032769128;XP_032769129 transcription factor COE1 protein-coding 625881975 Fam229a family with sequence similarity 229 member A 1 28661399 28663371 - 116896142 MODEL JAAIVD010000025;XM_032897129 XP_032753020 protein FAM229A protein-coding 625881982 Itih2 inter-alpha-trypsin inhibitor heavy chain 2 ENCODES a protein that exhibits hyaluronic acid binding (ortholog) 14 16186783 16222997 - 22301074 116883666 MODEL JAAIVD010000009;XM_032884863 XP_032740754 inter-alpha-trypsin inhibitor heavy chain H2 protein-coding 625882006 LOC116884100 small nucleolar RNA SNORA84 14 68656957 68657089 + 116884100 MODEL JAAIVD010000009;XR_004385839 snorna 625882009 LOC116914671 sperm acrosome-associated protein 7-like 13 72170253 72202729 + 22301074 116914671 MODEL JAAIVD010000008;XM_032919077 XP_032774968 protein-coding 625882019 Sez6 seizure related 6 homolog INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 9 96611117 96660535 + 30032202 116908700 MODEL JAAIVD010000002;XM_032912026;XM_032912027;XM_032912028;XM_032912029;XM_032912030 XP_032767917;XP_032767918;XP_032767919;XP_032767920;XP_032767921 seizure protein 6 homolog protein-coding 625882048 Prkd1 protein kinase D1 ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); cellular response to amino acid starvation (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN autophagosome membrane (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) 7 63010273 63308093 + 22301074;30032202 116905024 MODEL JAAIVD010000026;XM_032907704 XP_032763595 serine/threonine-protein kinase D1 protein-coding 625882070 Gcgr glucagon receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); Mahvash disease (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 9 63482625 63491025 - 22301074;30032202 116910170 MODEL JAAIVD010000002;XM_032914028 XP_032769919 protein-coding 625882089 LOC116893442 leukocyte immunoglobulin-like receptor subfamily B member 3 2 176765293 176772179 + 30032202 116893442 MODEL JAAIVD010000001;XM_032895209 XP_032751100 protein-coding 625882100 LOC116912668 40S ribosomal protein S13-like 11 22364769 22365427 + 116912668 MODEL JAAIVD010000006 pseudo 625882101 Ubtfl1 upstream binding transcription factor like 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); regulation of gene expression (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 14149632 14153585 + 116907257 MODEL JAAIVD010000027;XM_032910212 XP_032766103 upstream-binding factor 1-like protein 1 protein-coding 625882105 LOC116890416 60S ribosomal protein L31-like 1 269525488 269525925 + 116890416 MODEL JAAIVD010000025 pseudo 625882106 LOC116894953 small nucleolar RNA SNORD113/SNORD114 family 2 69054589 69054670 - 116894953 MODEL JAAIVD010000001 pseudo 625882107 Rnft2 ring finger protein, transmembrane 2 16 35583847 35636692 + 30032202 116885302 MODEL JAAIVD010000004;XM_032886553 XP_032742444 RING finger and transmembrane domain-containing protein 2 protein-coding 625882121 Capn10 calpain 10 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to insulin stimulus (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) 4 164893326 164905577 + 22301074;30032202 116899651 MODEL JAAIVD010000003;XM_032901660 XP_032757551 calpain-10 protein-coding 625882137 LOC116893934 calcitonin 2 86911766 86916749 + 22301074;30032202 116893934 MODEL JAAIVD010000001;XM_032895651;XM_032895652;XM_032895653;XM_032895654 XP_032751542;XP_032751543;XP_032751544;XP_032751545 calcitonin gene-related peptide 1 protein-coding 625882156 Ube2j1 ubiquitin conjugating enzyme E2 J1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Hrd1p ubiquitin ligase complex (ortholog) 1 109991710 110009817 - 116902329 MODEL JAAIVD010000025;XM_032904804;XM_032904813 XP_032760695;XP_032760704 ubiquitin-conjugating enzyme E2 J1 protein-coding 625882171 LOC116888162 teneurin-1-like X 115329232 115333715 + 30032202 116888162 MODEL JAAIVD010000014;XM_032889485 XP_032745376 protein-coding 625882177 LOC116895306 protein kinase C and casein kinase II substrate protein 3-like 3 22144228 22145488 - 116895306 MODEL JAAIVD010000012 pseudo 625882178 LOC116913521 tRNA methyltransferase 10 homolog A-like 12 49142605 49143578 - 116913521 MODEL JAAIVD010000007 pseudo 625882179 LOC116897981 V-set domain-containing T-cell activation inhibitor 1-like 4 22811306 22826228 - 116897981 MODEL JAAIVD010000003;XM_032899385 XP_032755276 protein-coding 625882187 Lims2 LIM zinc finger domain containing 2 INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2W (ortholog); lymphopenia (ortholog); neutropenia (ortholog); FOUND IN focal adhesion (ortholog) 15 12277642 12307266 - 22301074;30032202 116884274 MODEL JAAIVD010000010;XM_032885358 XP_032741249 LIM and senescent cell antigen-like-containing domain protein 2 protein-coding 625882201 LOC116895540 60S ribosome subunit biogenesis protein NIP7 homolog 3 120948013 120948551 + 116895540 MODEL JAAIVD010000012 pseudo 625882202 Sh2b3 SH2B adaptor protein 3 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to interleukin-3 (ortholog); embryonic hemopoiesis (ortholog); PARTICIPATES IN erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); chronic myeloid leukemia (ortholog); colorectal cancer (ortholog) 16 32007303 32028364 + 30032202 116885334 MODEL JAAIVD010000004;XM_032886605 XP_032742496 SH2B adapter protein 3 protein-coding 625882214 Chrm5 cholinergic receptor muscarinic 5 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN dopamine transport (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); transmission of nerve impulse (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); Cocaine-Related Disorders (ortholog) 5 90805745 90857550 - 22301074;30032202 116901748 MODEL JAAIVD010000023;XM_032903888 XP_032759779 muscarinic acetylcholine receptor M5 protein-coding 625882220 Srarp steroid receptor associated and regulated protein ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); INVOLVED IN positive regulation of intracellular estrogen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 16708893 16712803 + 30032202 116886379 MODEL JAAIVD010000025;XM_032887850 XP_032743741 steroid receptor-associated and regulated protein protein-coding 625882226 Xpa XPA, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA repair (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); multicellular organism growth (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Cockayne syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); DNA replication factor A complex (ortholog); nuclear body (ortholog) 1 321906 342143 + 22301074;30032202 116890707 MODEL JAAIVD010000025;XM_032891143 XP_032747034 DNA repair protein complementing XP-A cells protein-coding 625882236 Bcl2l14 BCL2 like 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH prostate carcinoma (ortholog); FOUND IN cytosol (ortholog) 6 15012937 15036559 - 22301074 116903176 MODEL JAAIVD010000024;XM_032905547 XP_032761438 apoptosis facilitator Bcl-2-like protein 14 protein-coding 625882246 LOC116889104 uncharacterized LOC116889104 X 24663211 24672674 - 116889104 MODEL JAAIVD010000014;XR_004386364;XR_004386365 ncrna 625882255 LOC116912759 60S ribosomal protein L13a-like 11 75168103 75168718 - 116912759 MODEL JAAIVD010000006 pseudo 625882256 Nelfcd negative elongation factor complex member C/D INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN NELF complex (ortholog); nucleus (ortholog) 5 143552056 143563163 - 22301074;30032202 116902267 MODEL JAAIVD010000023;XM_032904687 XP_032760578 negative elongation factor C/D protein-coding 625882275 Retreg2 reticulophagy regulator family member 2 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); reticulophagy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 4 148503692 148509872 + 116899516 MODEL JAAIVD010000003;XM_032901372;XM_032901373;XM_032901374 XP_032757263;XP_032757264;XP_032757265 reticulophagy regulator 2 protein-coding 625882297 LOC116889499 small nucleolar RNA SNORA48 X 3670835 3670966 + 116889499 MODEL JAAIVD010000014 pseudo 625882298 Lztfl1 leucine zipper transcription factor like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); negative regulation of protein localization to ciliary membrane (ortholog); negative regulation of protein localization to cilium (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 17 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 114815990 114839574 - 30032202 116908030 MODEL JAAIVD010000027;XM_032911295;XM_032911297;XM_032911298 XP_032767186;XP_032767188;XP_032767189 leucine zipper transcription factor-like protein 1 protein-coding 625882320 Tex9 testis expressed 9 FOUND IN centriolar satellite (ortholog) 8 66797960 66833247 - 116906784 MODEL JAAIVD010000027;XM_032909638 XP_032765529 testis-expressed protein 9 protein-coding 625882336 LOC116892803 gastrula zinc finger protein XlCGF26.1-like 2 186389930 186396888 + 22301074 116892803 MODEL JAAIVD010000001;XM_032894676 XP_032750567 protein-coding 625882342 LOC116895844 glyceraldehyde-3-phosphate dehydrogenase-like 3 84006884 84030550 - 116895844 MODEL JAAIVD010000012 pseudo 625882343 LOC116889716 DNA-directed RNA polymerase subunit beta'-like 22301074;30032202 116889716 MODEL JAAIVD010000061;XM_032890595 XP_032746486 protein-coding 625882344 Cops8 COP9 signalosome subunit 8 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); negative regulation of cell population proliferation (ortholog); protein deneddylation (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 162616064 162625875 + 30032202 116899629 MODEL JAAIVD010000003;XM_032901602 XP_032757493 COP9 signalosome complex subunit 8 protein-coding 625882356 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889670 MODEL JAAIVD010000045 trna 625882357 LOC116911856 small nucleolar RNA U13 10 46461167 46461274 + 116911856 MODEL JAAIVD010000005;XR_004389378 snorna 625882360 Epha10 EPH receptor A10 ENCODES a protein that exhibits transmembrane-ephrin receptor activity (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 88 (ortholog) 1 33383259 33416486 - 22301074;30032202 116896837 MODEL JAAIVD010000025;XM_032898344 XP_032754235 ephrin type-A receptor 10 protein-coding 625882381 Tmem237 transmembrane protein 237 INVOLVED IN cilium assembly (ortholog); regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); cone photoreceptor outer segment (ortholog) 4 133384074 133412457 + 30032202 116899416 MODEL JAAIVD010000003;XM_032901154 XP_032757045 protein-coding 625882398 Rxfp4 relaxin family peptide/INSL5 receptor 4 INVOLVED IN positive regulation of feeding behavior (ortholog) 3 64895407 64896579 + 22301074;30032202 116895426 MODEL JAAIVD010000012;XM_032896705 XP_032752596 relaxin-3 receptor 2 protein-coding 625882401 Kdm8 lysine demethylase 8 ENCODES a protein that exhibits aminopeptidase activity (ortholog); chromatin binding (ortholog); endopeptidase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); fibroblast proliferation (ortholog); G2/M transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Coffin-Siris syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 76464708 76480502 - 30032202 116891539 MODEL JAAIVD010000001;XM_032892695;XM_032892696 XP_032748586;XP_032748587 bifunctional peptidase and arginyl-hydroxylase JMJD5 protein-coding 625882414 LOC116913107 cadherin-related family member 3-like 12 83739966 83808583 - 22301074;30032202 116913107 MODEL JAAIVD010000007;XM_032917247 XP_032773138 protein-coding 625882435 Ms4a7 membrane spanning 4-domains A7 FOUND IN trans-Golgi network (ortholog) 2 10774434 10789567 - 30032202 116893645 MODEL JAAIVD010000001;XM_032895362;XM_032895363 XP_032751253;XP_032751254 membrane-spanning 4-domains subfamily A member 7 protein-coding 625882449 LOC116909641 testisin 9 1186874 1191882 + 22301074 116909641 MODEL JAAIVD010000002;XM_032913284 XP_032769175 protein-coding 625882459 Lin28b lin-28 RNA binding posttranscriptional regulator B ENCODES a protein that exhibits RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); negative regulation of pre-miRNA processing (ortholog); negative regulation of primary miRNA processing (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Neoplastic Cell Transformation (ortholog); neuroblastoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 219268298 219342384 - 22301074 116897347 MODEL JAAIVD010000012;XM_032899104;XM_032899105 XP_032754995;XP_032754996 lin-28 homolog B;protein lin-28 homolog B protein-coding 625882468 LOC116895859 lymphokine-activated killer T-cell-originated protein kinase-like 3 93103472 93104529 - 116895859 MODEL JAAIVD010000012 pseudo 625882469 LOC116900528 40S ribosomal protein S6-like 5 87356919 87357674 - 116900528 MODEL JAAIVD010000023 pseudo 625882470 Smpd3 sphingomyelin phosphodiesterase 3 ENCODES a protein that exhibits identical protein binding (ortholog); neutral sphingomyelin phosphodiesterase activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); hypopituitarism (ortholog); leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cis cisterna (ortholog); plasma membrane (ortholog) 17 25998607 26079684 - 22301074;30032202 116886207 MODEL JAAIVD010000011;XM_032887594;XM_032887595 XP_032743485;XP_032743486 protein-coding 625882485 LOC116902461 U6 spliceosomal RNA 5 15552707 15552813 + 116902461 MODEL JAAIVD010000023;XR_004388080 snrna 625882488 Slc22a16 solute carrier family 22 member 16 ENCODES a protein that exhibits amine transmembrane transporter activity (ortholog); carnitine transmembrane transporter activity (ortholog); organic cation transmembrane transporter activity (ortholog); INVOLVED IN acid secretion (ortholog); carnitine transmembrane transport (ortholog); carnitine transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH COVID-19 (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 18 40336722 40371101 + 22301074;30032202 116886976 MODEL JAAIVD010000013;XM_032888466 XP_032744357 protein-coding 625882500 LOC116888601 uncharacterized LOC116888601 X 89120755 89124287 - 116888601 MODEL JAAIVD010000014;XR_004386327 ncrna 625882504 Tnfrsf17 TNF receptor superfamily member 17 INVOLVED IN lymphocyte homeostasis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); COVID-19 (ortholog); multiple myeloma (ortholog) 9 10962116 10967864 - 22301074;30032202 116909486 MODEL JAAIVD010000002;XM_032913084 XP_032768975 tumor necrosis factor receptor superfamily member 17 protein-coding 625882511 LOC116892493 zinc finger protein 45-like 2 170403016 170433038 + 30032202 116892493 MODEL JAAIVD010000001;XM_032894232;XM_032894233;XM_032894234;XM_032894235;XM_032894236;XM_032894237;XR_004386953 XP_032750123;XP_032750124;XP_032750125;XP_032750126;XP_032750127;XP_032750128 protein-coding 625882541 LOC116893623 interferon-induced transmembrane protein 3 2 8468624 8469835 + 30032202 116893623 MODEL JAAIVD010000001;X61381;XM_032895336 CAA43655;XP_032751227 protein-coding 625882547 LOC116890258 60S ribosomal protein L36-like 1 12016796 12017151 - 116890258 MODEL JAAIVD010000025 pseudo 625882548 LOC116899608 60S ribosomal protein L10a-like 1 107657873 107658495 + 116899608 MODEL JAAIVD010000025 pseudo 625882549 Fabp12 fatty acid binding protein 12 3 144287510 144303130 - 30032202 116895586 MODEL JAAIVD010000012;XM_032896813 XP_032752704 fatty acid-binding protein 12 protein-coding 625882558 C1qtnf2 C1q and TNF related 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of D-glucose import (ortholog); positive regulation of fatty acid oxidation (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) 9 26289770 26306552 + 22301074 116909009 MODEL JAAIVD010000002;XM_032912483 XP_032768374 complement C1q tumor necrosis factor-related protein 2 protein-coding 625882566 LOC116886305 preferentially expressed antigen in melanoma-like protein 7 1 14478633 14481406 - 22301074;30032202 116886305 MODEL JAAIVD010000025;XM_032887751 XP_032743642 protein-coding 625882571 Fignl1 fidgetin like 1 INVOLVED IN cellular response to ionizing radiation (ortholog); male meiotic nuclear division (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) 11 80721458 80724267 - 22301074;30032202 116912765 MODEL JAAIVD010000006;XM_032916915 XP_032772806 fidgetin-like protein 1 protein-coding 625882576 LOC116893367 secretoglobin family 2B member 24-like 2 164709466 164710387 + 22301074;30032202 116893367 MODEL JAAIVD010000001;XM_032895168 XP_032751059 protein-coding 625882581 LOC116886763 5S ribosomal RNA 17 43131748 43131865 - 116886763 MODEL JAAIVD010000011;XR_004386164 rrna 625882584 Dnhd1 dynein heavy chain domain 1 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN sperm flagellum (ortholog) 2 104478342 104564370 + 22301074;30032202 116891823 MODEL JAAIVD010000001;XM_032893188 XP_032749079 dynein heavy chain domain-containing protein 1 protein-coding 625882632 LOC116898315 nuclear receptor subfamily 5 group A member 2-like 4 37517084 37518379 + 116898315 MODEL JAAIVD010000003 pseudo 625882633 LOC116890119 cadherin EGF LAG seven-pass G-type receptor 1-like 1 255334217 255381347 - 22301074 116890119 MODEL JAAIVD010000025;XM_032890861 XP_032746752 protein-coding 625882639 Arc activity regulated cytoskeleton associated protein ENCODES a protein that exhibits mRNA binding (ortholog); structural molecule activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell migration (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcoholic Intoxication (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 247413850 247417327 - 22301074;30032202 116912504 MODEL JAAIVD010000025;XM_032916594 XP_032772485 activity-regulated cytoskeleton-associated protein protein-coding 625882646 LOC116892021 uncharacterized LOC116892021 2 137781180 137852702 + 116892021 MODEL JAAIVD010000001;XR_004386891;XR_004386892 ncrna 625882653 LOC116902495 U6 spliceosomal RNA 5 734338 734440 - 116902495 MODEL JAAIVD010000023;XR_004388109 snrna 625882656 Sem1 SEM1 26S proteasome subunit INVOLVED IN double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH squamous cell carcinoma (ortholog); FOUND IN integrator complex (ortholog); proteasome complex (ortholog); protein-containing complex (ortholog) 1 46159208 46159645 + 22301074;30032202 116899095 MODEL JAAIVD010000025;XM_032900608 XP_032756499 26S proteasome complex subunit SEM1;SEM1 26S proteasome complex subunit protein-coding 625882661 LOC116905133 uncharacterized LOC116905133 7 53478015 53479423 - 116905133 MODEL JAAIVD010000026;XR_004388488 ncrna 625882666 Kash5 KASH domain containing 5 ENCODES a protein that exhibits dynein complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); chromosome localization to nuclear envelope involved in homologous chromosome segregation (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN chromosome, telomeric region (ortholog); lateral element (ortholog); meiotic nuclear membrane microtubule tethering complex (ortholog) 2 154334927 154358328 + 30032202 116894344 MODEL JAAIVD010000001;XM_032896042 XP_032751933 protein KASH5 protein-coding 625882689 LOC116896316 uncharacterized LOC116896316 3 39038657 39040648 + 116896316 MODEL JAAIVD010000012;XR_004387331 ncrna 625882693 LOC116914324 U1 small nuclear ribonucleoprotein C-like 13 44625068 44627913 - 116914324 MODEL JAAIVD010000008 pseudo 625882694 LOC116895334 glyceraldehyde-3-phosphate dehydrogenase-like 3 37164438 37165445 - 22301074;30032202 116895334 MODEL JAAIVD010000012;XM_032896642 XP_032752533 protein-coding 625882698 Prok2 prokineticin 2 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chemotaxis (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); disorder of sexual development (ortholog); genetic disease (ortholog) 6 47347085 47361289 + 116902708 MODEL JAAIVD010000024;XM_032905061;XM_032905062;XM_032905063 XP_032760952;XP_032760953;XP_032760954 prokineticin-2 protein-coding 625882707 LOC116894777 cbp/p300-interacting transactivator 1-like 2 215427 230093 - 116894777 MODEL JAAIVD010000001 pseudo 625882708 LOC116889370 high mobility group protein B4-like X 82599877 82600420 + 116889370 MODEL JAAIVD010000014 pseudo 625882709 LOC116895016 small nucleolar RNA SNORA48 2 77396679 77396821 - 116895016 MODEL JAAIVD010000001;XR_004387203 snorna 625882712 LOC116895158 60S ribosomal protein L28-like 3 9005388 9005700 - 116895158 MODEL JAAIVD010000012 pseudo 625882713 Rasl10a RAS like family 10 member A 11 74035947 74038000 + 22301074 116912264 MODEL JAAIVD010000006;XM_032916252 XP_032772143 ras-like protein family member 10A protein-coding 625882720 Trpm1 transient receptor potential cation channel subfamily M member 1 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); cellular response to light stimulus (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); Ependymomas (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 2 136150467 136265086 - 22301074;30032202 116894293 MODEL JAAIVD010000001;XM_032895997;XM_032895998 XP_032751888;XP_032751889 protein-coding 625882753 Mdh1 malate dehydrogenase 1 ENCODES a protein that exhibits L-malate dehydrogenase (NAD+) activity (ortholog); malate dehydrogenase activity (ortholog); NAD binding (ortholog); INVOLVED IN malate metabolic process (ortholog); malate-aspartate shuttle (ortholog); NAD+ metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; nicotinamide adenine dinucleotide metabolic pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 89663414 89679121 - 22301074;30032202 116912092 MODEL JAAIVD010000006;XM_032915983 XP_032771874 malate dehydrogenase, cytoplasmic protein-coding 625882766 LOC116907697 cytochrome c, somatic-like 8 17277182 17277553 + 116907697 MODEL JAAIVD010000027 pseudo 625882767 LOC116899727 zinc finger protein 844-like 4 182335240 182336436 + 116899727 MODEL JAAIVD010000003 pseudo 625882768 Sdr42e1 short chain dehydrogenase/reductase family 42E, member 1 ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Experimental Liver Cirrhosis (ortholog) 17 37316317 37328923 - 22301074 116886468 MODEL JAAIVD010000011;XM_032887970 XP_032743861 short-chain dehydrogenase/reductase family 42E member 1 protein-coding 625882775 Znf260 zinc finger protein 260 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 165929447 165937803 - 30032202 116892344 MODEL JAAIVD010000001;XM_032893986 XP_032749877 protein-coding 625882781 Slc35f2 solute carrier family 35 member F2 8 47750104 47793634 + 22301074 116907939 MODEL JAAIVD010000027;XM_032911156 XP_032767047 protein-coding 625882793 Igfals insulin like growth factor binding protein acid labile subunit ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to growth hormone stimulus (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Acid-Labile Subunit Deficiency (ortholog); anorexia nervosa (ortholog); Burns (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) 9 2158409 2162472 + 22301074;30032202 116910004 MODEL JAAIVD010000002;XM_032913789;XM_032913790 XP_032769680;XP_032769681 insulin-like growth factor-binding protein complex acid labile subunit protein-coding 625882803 Shq1 SHQ1, H/ACA ribonucleoprotein assembly factor INVOLVED IN positive regulation of TORC1 signaling (ortholog); protein-RNA complex assembly (ortholog); regulation of androgen receptor signaling pathway (ortholog); ASSOCIATED WITH dystonia 35, childhood-onset (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSTONIA AND SEIZURES (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 46349358 46442105 + 30032202 116903462 MODEL JAAIVD010000024;XM_032906015 XP_032761906 protein SHQ1 homolog protein-coding 625882818 Lmtk2 lemur tyrosine kinase 2 ENCODES a protein that exhibits myosin VI binding (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); peptidyl-serine phosphorylation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); growth cone (ortholog) 16 9006194 9087336 - 22301074;30032202 116885948 MODEL JAAIVD010000004;XM_032887265;XM_032887266;XM_032887268 XP_032743156;XP_032743157;XP_032743159 serine/threonine-protein kinase LMTK2 protein-coding 625882841 Pla2g15 phospholipase A2 group XV ENCODES a protein that exhibits acylglycerol O-acyltransferase activity (ortholog); calcium-independent phospholipase A2 activity (ortholog); O-acyltransferase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); diacylglycerol biosynthetic process (ortholog); glycerophospholipid metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); COVID-19 (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog); nucleoplasm (ortholog) 17 25887964 25905615 + 22301074;30032202 116886388 MODEL JAAIVD010000011;XM_032887854;XM_032887855 XP_032743745;XP_032743746 group XV phospholipase A2 protein-coding 625882856 LOC116914464 zinc finger protein 709-like 13 13801475 13813111 + 30032202 116914464 MODEL JAAIVD010000008;XM_032918765;XM_032918766 XP_032774656;XP_032774657 zinc finger protein 14-like protein-coding 625882867 Sap30 Sin3A associated protein 30 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 31399018 31404389 + 22301074;30032202 116914780 MODEL JAAIVD010000008;XM_032919228 XP_032775119 histone deacetylase complex subunit SAP30 protein-coding 625882875 Slc25a10 solute carrier family 25 member 10 ENCODES a protein that exhibits dicarboxylic acid transmembrane transporter activity (ortholog); malate transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN glyceraldehyde-3-phosphate biosynthetic process (ortholog); malate transport (ortholog); phosphate ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 63524817 63532481 - 22301074;30032202 116908950 MODEL JAAIVD010000002;XM_032912410 XP_032768301 mitochondrial dicarboxylate carrier protein-coding 625882890 LOC116906891 ubiquitin-40S ribosomal protein S27a-like 1 156058283 156059730 + 116906891 MODEL JAAIVD010000025 pseudo 625882891 Gask1b golgi associated kinase 1B ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Golgi apparatus (ortholog) 3 73451547 73506871 - 30032202 116896757 MODEL JAAIVD010000012;XM_032898203 XP_032754094 Golgi-associated kinase 1B protein-coding 625882900 LOC116912491 granulocyte-macrophage colony-stimulating factor receptor subunit alpha-like 11 18713998 18719623 - 22301074 116912491 MODEL JAAIVD010000006;XM_032916575;XM_032916576;XM_032916577;XM_032916578 XP_032772466;XP_032772467;XP_032772468;XP_032772469 protein-coding 625882923 Ttll11 tubulin tyrosine ligase like 11 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN microtubule severing (ortholog); FOUND IN ciliary basal body (ortholog) 5 13496764 13580434 + 30032202 116901345 MODEL JAAIVD010000023;XM_032903181 XP_032759072 tubulin polyglutamylase TTLL11 protein-coding 625882932 Ubxn11 UBX domain protein 11 1 24113838 24138255 - 30032202 116894871 MODEL JAAIVD010000025;XM_032896500 XP_032752391 UBX domain-containing protein 11 protein-coding 625882951 LOC116897781 immunoglobulin omega chain-like 4 3243573 3244094 + 30032202 116897781 MODEL JAAIVD010000003;XM_032899206 XP_032755097 protein-coding 625882956 Retn resistin INVOLVED IN fat cell differentiation (ortholog); negative regulation of feeding behavior (ortholog); positive regulation of collagen metabolic process (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Albuminuria (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 16 1577707 1579490 + 22301074;30032202 116885502 MODEL JAAIVD010000004;XM_032886794 XP_032742685 protein-coding 625882964 Aqp10 aquaporin 10 ENCODES a protein that exhibits glycerol channel activity (ortholog); water channel activity (ortholog); INVOLVED IN glycerol transmembrane transport (ortholog); protein homotetramerization (ortholog); response to toxic substance (ortholog); PARTICIPATES IN water transport pathway; FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 3 63679378 63683081 + 22301074;30032202 116895798 MODEL JAAIVD010000012;XM_032896938 XP_032752829 aquaporin-10 protein-coding 625882972 LOC116885489 uncharacterized LOC116885489 16 39239452 39245014 + 116885489 MODEL JAAIVD010000004;XR_004386011 ncrna 625882977 Ms4a5 membrane spanning 4-domains A5 2 10738716 10746967 - 30032202 116893643 MODEL JAAIVD010000001;XM_032895359 XP_032751250 membrane-spanning 4-domains subfamily A member 5 protein-coding 625882986 LOC116907190 vomeronasal type-2 receptor 116-like 1 159468310 159491754 + 22301074;30032202 116907190 MODEL JAAIVD010000025;XM_032910153 XP_032766044 protein-coding 625882995 LOC116906445 small nucleolar RNA SNORA17 7 54523049 54523179 - 116906445 MODEL JAAIVD010000026;XR_004388703 snorna 625882998 Wwp1 WW domain containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Wolff-Parkinson-White syndrome (ortholog) 1 124017630 124114463 + 22301074 116903076 MODEL JAAIVD010000025;XM_032905398;XM_032905406;XM_032905412 XP_032761289;XP_032761297;XP_032761303 NEDD4-like E3 ubiquitin-protein ligase WWP1 protein-coding 625883034 Erln endoregulin FOUND IN endoplasmic reticulum membrane (ortholog) 9 68147537 68148957 - 116909814 MODEL JAAIVD010000002;XM_032913517 XP_032769408 Smim6 small integral membrane protein 6 protein-coding 625883040 LOC116913181 non-histone chromosomal protein HMG-17-like 12 59483481 59483743 - 116913181 MODEL JAAIVD010000007 pseudo 625883041 Stk25 serine/threonine kinase 25 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); establishment of Golgi localization (ortholog); establishment or maintenance of cell polarity (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); Golgi apparatus (ortholog) 4 165552156 165578626 - 22301074 116899665 MODEL JAAIVD010000003;XM_032901677;XM_032901678;XM_032901679 XP_032757568;XP_032757569;XP_032757570 serine/threonine-protein kinase 25 protein-coding 625883065 Ap3d1 adaptor related protein complex 3 subunit delta 1 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN axon (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) 1 154141521 154176648 + 22301074;30032202 116904937 MODEL JAAIVD010000025;XM_032907579 XP_032763470 AP-3 complex subunit delta-1 protein-coding 625883100 Als2cl ALS2 C-terminal like ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 8 101465833 101481930 + 116907687 MODEL JAAIVD010000027;XM_032910793 XP_032766684 ALS2 C-terminal-like protein protein-coding 625883129 LOC116904542 proline-rich proteoglycan 2 6 16066502 16069463 - 30032202 116904542 MODEL JAAIVD010000024;XM_032907335 XP_032763226 protein-coding 625883138 Rbm34 RNA binding motif protein 34 FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 46468763 46488579 - 22301074 116886178 MODEL JAAIVD010000011;XM_032887546 XP_032743437 RNA-binding protein 34 protein-coding 625883152 LOC116900301 olfactory receptor 5T3-like 5 63812326 63813303 + 22301074;30032202 116900301 MODEL JAAIVD010000023;XM_032902057 XP_032757948 protein-coding 625883156 LOC116893237 60S ribosomal protein L7a-like 2 121605658 121607265 - 116893237 MODEL JAAIVD010000001 pseudo 625883157 Arrb2 arrestin beta 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-1A adrenergic receptor binding (ortholog); alpha-1B adrenergic receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); canonical NF-kappaB signal transduction (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); Arteriovenous Fistula (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 9 50043684 50051664 + 22301074;30032202 116909587 MODEL JAAIVD010000002;XM_032913210 XP_032769101 beta-arrestin-2 protein-coding 625883176 Ecpas Ecm29 proteasome adaptor and scaffold ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); FOUND IN centrosome (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasmic vesicle (ortholog) 1 92561586 92669508 + 22301074;30032202 116901593 MODEL JAAIVD010000025;XM_032903622 XP_032759513 proteasome adapter and scaffold protein ECM29 protein-coding 625883229 LOC116906749 uncharacterized LOC116906749 8 43607745 43608316 + 116906749 MODEL JAAIVD010000027;XR_004388767 ncrna 625883233 Ghr growth hormone receptor ENCODES a protein that exhibits growth factor binding (ortholog); growth hormone receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN growth hormone signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 3 176485597 176716127 + 22301074;2792761;30032202 116897160 MODEL AM910976;EU814883;EU814885;JAAIVD010000012;X16726;XM_032898830 ACN62938;ACN62940;CAP45643;XP_032754721 protein-coding 625883247 LOC116890316 U5 spliceosomal RNA 1 40826272 40826387 + 116890316 MODEL JAAIVD010000025;XR_004386540 snrna 625883250 Med12 mediator complex subunit 12 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axis elongation involved in somitogenesis (ortholog); embryonic brain development (ortholog); embryonic neurocranium morphogenesis (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); angiosarcoma (ortholog); FOUND IN CKM complex (ortholog); mediator complex (ortholog); nucleus (ortholog) X 59245992 59269018 - 22301074;30032202 116888474 MODEL JAAIVD010000014;XM_032889753 XP_032745644 mediator of RNA polymerase II transcription subunit 12 protein-coding 625883300 LOC116897052 uncharacterized LOC116897052 3 149555288 149557755 - 116897052 MODEL JAAIVD010000012;XR_004387392 ncrna 625883304 LOC116890238 olfactory receptor 8S1-like 1 271245471 271246397 + 22301074 116890238 MODEL JAAIVD010000025;XM_032890967 XP_032746858 protein-coding 625883307 LOC116906217 Ig heavy chain V region 5-84-like 7 121377729 121380440 + 116906217 MODEL JAAIVD010000026 pseudo 625883308 LOC116887998 ATP-binding cassette sub-family E member 1-like X 75326004 75327788 + 116887998 MODEL JAAIVD010000014 pseudo 625883309 LOC116900893 olfactory receptor 4C15-like 5 70963050 70963985 - 22301074 116900893 MODEL JAAIVD010000023;XM_032902567 XP_032758458 protein-coding 625883312 Mex3d mex-3 RNA binding family member D ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 1 154495621 154502714 + 22301074;30032202 116905109 MODEL JAAIVD010000025;XM_032907850 XP_032763741 RNA-binding protein MEX3D protein-coding 625883318 LOC116900685 cystatin 10-like 5 128914239 128918870 + 22301074;30032202 116900685 MODEL JAAIVD010000023;XM_032902388 XP_032758279 protein-coding 625883326 Itprip inositol 1,4,5-trisphosphate receptor interacting protein ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN nuclear outer membrane (ortholog) 2 47405375 47427827 - 30032202 116891275 MODEL JAAIVD010000001;XM_032892176 XP_032748067 inositol 1,4,5-trisphosphate receptor-interacting protein protein-coding 625883332 LOC116905622 high mobility group protein B2-like 7 19145639 19147417 - 116905622 MODEL JAAIVD010000026 pseudo 625883333 LOC116907148 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like 8 64798305 64798477 + 116907148 MODEL JAAIVD010000027 pseudo 625883334 LOC116912559 40S ribosomal protein S3a-like 11 58108238 58109026 + 22301074;30032202 116912559 MODEL JAAIVD010000006;XM_032916661 XP_032772552 protein-coding 625883337 LOC116897723 AP-3 complex subunit sigma-1-like 4 39975939 40006042 + 116897723 MODEL JAAIVD010000003 pseudo 625883338 LOC116912257 40S ribosomal protein S2-like 11 64226383 64227283 + 116912257 MODEL JAAIVD010000006 pseudo 625883339 LOC116883237 uncharacterized LOC116883237 14 60243128 60243642 - 116883237 MODEL JAAIVD010000009;XM_032884245 XP_032740136 uncharacterized protein LOC116883237 protein-coding 625883344 LOC116895492 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial-like 3 102074244 102074482 - 116895492 MODEL JAAIVD010000012 pseudo 625883345 LOC116909431 L-lactate dehydrogenase A chain-like 9 52877920 52878948 + 116909431 MODEL JAAIVD010000002 pseudo 625883346 LOC116893669 olfactory receptor 4D11 2 12134816 12135748 - 22301074 116893669 MODEL JAAIVD010000001;XM_032895384 XP_032751275 protein-coding 625883349 LOC116912059 rRNA 2'-O-methyltransferase fibrillarin-like 11 96929446 96945917 - 116912059 MODEL JAAIVD010000006 pseudo 625883350 Cdk2ap2 cyclin dependent kinase 2 associated protein 2 INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of microtubule cytoskeleton organization (ortholog); regulation of stem cell division (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); nucleus (ortholog) 2 3542624 3544674 - 30032202 116890791 MODEL JAAIVD010000001;XM_032891265;XM_032891266;XM_032891267 XP_032747156;XP_032747157;XP_032747158 cyclin-dependent kinase 2-associated protein 2 protein-coding 625883364 Cd38 CD38 molecule ENCODES a protein that exhibits hydrolase activity, acting on glycosyl bonds (ortholog); identical protein binding (ortholog); NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); B cell receptor signaling pathway (ortholog); female pregnancy (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; ASSOCIATED WITH Albuminuria (ortholog); Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) 11 61853573 61894126 - 22301074;30032202 116912587 MODEL JAAIVD010000006;XM_032916703 XP_032772594 ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 1 protein-coding 625883376 Lypd6b LY6/PLAUR domain containing 6B ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog) 5 27759257 27806085 + 30032202 116901397 MODEL JAAIVD010000023;XM_032903268;XR_004387987;XR_004387988 XP_032759159 ly6/PLAUR domain-containing protein 6B protein-coding 625883390 LOC116903050 glyceraldehyde-3-phosphate dehydrogenase-like 6 111225349 111226332 - 116903050 MODEL JAAIVD010000024 pseudo 625883391 LOC116898817 protein FAM162A-like 4 20816356 21048841 - 30032202 116898817 MODEL JAAIVD010000003;XM_032900171 XP_032756062 protein-coding 625883400 LOC116887749 U2 spliceosomal RNA 18 48662419 48662615 - 116887749 MODEL JAAIVD010000013;XR_004386252 snrna 625883403 LOC116897189 heterogeneous nuclear ribonucleoprotein R-like 3 184077855 184079711 - 116897189 MODEL JAAIVD010000012 pseudo 625883404 Ablim3 actin binding LIM protein family member 3 INVOLVED IN cilium assembly (ortholog); lamellipodium assembly (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); lamellipodium (ortholog); stress fiber (ortholog) 15 70035833 70153863 + 22301074;30032202 116884454 MODEL JAAIVD010000010;XM_032885553 XP_032741444 actin-binding LIM protein 3 protein-coding 625883432 Gabarapl2 GABA type A receptor associated protein like 2 ENCODES a protein that exhibits phosphatidylethanolamine binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); protein localization to endoplasmic reticulum (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 17 31632346 31633514 + 116886351 MODEL JAAIVD010000011;XM_032887803 XP_032743694 gamma-aminobutyric acid receptor-associated protein-like 2 protein-coding 625883438 LOC116885988 U6 spliceosomal RNA 16 11611518 11611620 + 116885988 MODEL JAAIVD010000004;XR_004386064 snrna 625883441 Cstf2t cleavage stimulation factor subunit 2 tau variant ENCODES a protein that exhibits RNA binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog) 2 31174163 31177862 + 22301074;30032202 116891083 MODEL JAAIVD010000001;XM_032891797 XP_032747688 protein-coding 625883446 C2 complement C2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH age related macular degeneration 14 (ortholog); Alzheimer's disease (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN classical-complement-pathway C3/C5 convertase complex (ortholog); symbiont cell surface (ortholog) 18 7454591 7474022 - 22301074;30032202 116887314 MODEL JAAIVD010000013;XM_032888903 XP_032744794 protein-coding 625883468 Otop1 otopetrin 1 ENCODES a protein that exhibits proton channel activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); detection of gravity (ortholog); inner ear morphogenesis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 11 66886611 66914061 - 22301074;30032202 116912811 MODEL JAAIVD010000006;XM_032916979 XP_032772870 proton channel OTOP1 protein-coding 625883477 Sart1 spliceosome associated factor 1, recruiter of U4/U6.U5 tri-snRNP INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); Golgi apparatus (ortholog) 2 2282965 2291335 + 22301074;30032202 116890704 MODEL JAAIVD010000001;XM_032891134 XP_032747025 U4/U6.U5 tri-snRNP-associated protein 1 protein-coding 625883500 LOC116905805 dehydrogenase/reductase SDR family member 7-like 7 86763124 86773765 - 22301074 116905805 MODEL JAAIVD010000026;XM_032908776 XP_032764667 protein-coding 625883508 LOC116883460 LIM zinc-binding domain-containing Nebulette 14 6285494 6474422 + 30032202 116883460 MODEL JAAIVD010000009;XM_032884609;XR_004385762 XP_032740500 protein-coding 625883520 Eda2r ectodysplasin A2 receptor ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 1 (ortholog); tooth agenesis (ortholog); FOUND IN plasma membrane (ortholog) X 53830395 53869906 + 22301074;30032202 116889219 MODEL JAAIVD010000014;XM_032890370;XM_032890371;XM_032890372;XM_032890373 XP_032746261;XP_032746262;XP_032746263;XP_032746264 tumor necrosis factor receptor superfamily member 27 protein-coding 625883539 LOC116910666 small nucleolar RNA SNORA64/SNORA10 family 9 2007257 2007390 + 116910666 MODEL JAAIVD010000002;XR_004389198 snorna 625883542 LOC116898538 protein SET-like 4 145607500 145608225 + 116898538 MODEL JAAIVD010000003 pseudo 625883543 Tspan8 tetraspanin 8 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); regulation of gene expression (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Arterial Occlusive Diseases (ortholog); breast ductal carcinoma (ortholog); FOUND IN cell surface (ortholog) 1 193979495 194011600 + 22301074;30032202 116909091 MODEL JAAIVD010000025;XM_032912565 XP_032768456 tetraspanin-8 protein-coding 625883555 Mid1ip1 MID1 interacting protein 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); ligase regulator activity (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); positive regulation of ligase activity (ortholog); ASSOCIATED WITH Contracture (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) X 10323965 10325554 + 30032202 116888848 MODEL JAAIVD010000014;XM_032890116 XP_032746007 mid1-interacting protein 1 protein-coding 625883560 Ints12 integrator complex subunit 12 INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) 3 25824689 25842062 - 30032202 116896235 MODEL JAAIVD010000012;XM_032897297 XP_032753188 protein-coding 625883571 Prrg2 proline rich and Gla domain 2 FOUND IN plasma membrane (ortholog) 2 154483247 154492424 + 22301074;30032202 116892173 MODEL JAAIVD010000001;XM_032893680;XM_032893681 XP_032749571;XP_032749572 transmembrane gamma-carboxyglutamic acid protein 2 protein-coding 625883586 LOC116912499 glyceraldehyde-3-phosphate dehydrogenase-like 11 18129755 18130371 + 116912499 MODEL JAAIVD010000006 pseudo 625883587 LOC116895889 D-3-phosphoglycerate dehydrogenase-like 3 114348187 114349761 + 116895889 MODEL JAAIVD010000012 pseudo 625883588 Dnase1l1 deoxyribonuclease 1 like 1 FOUND IN endoplasmic reticulum (ortholog) X 128276493 128285466 - 22301074;30032202 116888440 MODEL JAAIVD010000014;XM_032889716;XM_032889717 XP_032745607;XP_032745608 deoxyribonuclease-1-like 1 protein-coding 625883601 Myadm myeloid associated differentiation marker INVOLVED IN cell-cell junction maintenance (ortholog); establishment of endothelial barrier (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog); membrane raft (ortholog) 2 177932379 177940926 + 30032202 116892690 MODEL JAAIVD010000001;XM_032894545;XM_032894546;XM_032894547;XM_032894548 XP_032750436;XP_032750437;XP_032750438;XP_032750439 myeloid-associated differentiation marker protein-coding 625883617 LOC116884109 U4 spliceosomal RNA 14 58756935 58757020 + 116884109 MODEL JAAIVD010000009 pseudo 625883618 Zmynd19 zinc finger MYND-type containing 19 FOUND IN cytoplasm (ortholog); membrane (ortholog); synapse (ortholog) 5 12230759 12242314 - 116901331 MODEL JAAIVD010000023;XM_032903151 XP_032759042 zinc finger MYND domain-containing protein 19 protein-coding 625883628 LOC116893340 histone H2A.J-like 2 156322819 156323233 - 116893340 MODEL JAAIVD010000001 pseudo 625883629 LOC116912656 60S ribosomal protein L28-like 11 94302769 94303227 - 116912656 MODEL JAAIVD010000006 pseudo 625883630 LOC116884572 uncharacterized LOC116884572 15 33020600 33024719 + 116884572 MODEL JAAIVD010000010;XR_004385881 ncrna 625883635 LOC116905219 M-phase phosphoprotein 6-like 7 94586809 94587278 - 116905219 MODEL JAAIVD010000026 pseudo 625883636 Dhfr dihydrofolate reductase ENCODES a protein that exhibits dihydrofolate reductase activity (ortholog); dihydrofolic acid binding (ortholog); folate reductase activity (ortholog); INVOLVED IN axon regeneration (ortholog); dihydrofolate metabolic process (ortholog); dTMP biosynthetic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; dopa responsive dystonia pathway; folate cycle metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 203914132 203936441 - 22301074;30032202 116897301 MODEL JAAIVD010000012;XM_032899042;XM_032899043 XP_032754933;XP_032754934 protein-coding 625883649 LOC116894931 small nucleolar RNA SNORD115 2 140296932 140297010 - 116894931 MODEL JAAIVD010000001;XR_004387130 snorna 625883652 Ca5b carbonic anhydrase 5B ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN mitochondrion (ortholog) X 24563966 24599773 - 22301074;30032202 116889190 MODEL JAAIVD010000014;XM_032890350 XP_032746241 carbonic anhydrase 5B, mitochondrial protein-coding 625883663 Pop4 POP4 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 160367927 160376120 + 22301074;30032202 116892250 MODEL JAAIVD010000001;XM_032893821 XP_032749712 POP4 homolog, ribonuclease P/MRP subunit;ribonuclease P protein subunit p29 protein-coding 625883674 Fam83f family with sequence similarity 83 member F ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); Teratozoospermia (ortholog) 1 250432440 250460758 + 116913816 MODEL JAAIVD010000025;XM_032918131 XP_032774022 protein FAM83F protein-coding 625883683 Shroom3 shroom family member 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); columnar/cuboidal epithelial cell development (ortholog); neural tube closure (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 11 5718494 5785073 + 22301074;30032202 116912901 MODEL JAAIVD010000006;XM_032917159 XP_032773050 protein Shroom3 protein-coding 625883697 Myo10 myosin X ENCODES a protein that exhibits spectrin binding (ortholog); INVOLVED IN positive regulation of cell-cell adhesion (ortholog); regulation of cell shape (ortholog); regulation of filopodium assembly (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); neuron projection (ortholog) 3 155001294 155203732 - 22301074 116897071 MODEL JAAIVD010000012;XM_032898696 XP_032754587 unconventional myosin-X protein-coding 625883742 Atg12 autophagy related 12 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Brain Injuries (ortholog); Hereditary Neoplastic Syndromes (ortholog); metabolic dysfunction-associated steatohepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); membrane (ortholog) 15 40311008 40320469 + 22301074;30032202 116884961 MODEL JAAIVD010000010;XM_032886165;XM_032886166 XP_032742056;XP_032742057 ubiquitin-like protein ATG12 protein-coding 625883754 LOC116914334 60S ribosomal protein L10a-like 13 48147947 48148400 - 116914334 MODEL JAAIVD010000008 pseudo 625883755 LOC116898465 heterogeneous nuclear ribonucleoprotein A1-like 4 106993394 106995209 + 116898465 MODEL JAAIVD010000003 pseudo 625883756 St8sia3 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 3 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); identical protein binding (ortholog); sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); glycoprotein metabolic process (ortholog); N-glycan processing (ortholog) 15 66999168 67005940 - 22301074;30032202 116884721 MODEL JAAIVD010000010;XM_032885908 XP_032741799 sia-alpha-2,3-Gal-beta-1,4-GlcNAc-R:alpha 2,8-sialyltransferase protein-coding 625883764 LOC116894071 olfactory receptor 52R1-like 2 102955422 102956381 + 22301074 116894071 MODEL JAAIVD010000001;XM_032895794 XP_032751685 protein-coding 625883767 LOC116908926 keratin-associated protein 1-3-like 9 54416233 54416769 - 22301074 116908926 MODEL JAAIVD010000002;XM_032912386 XP_032768277 protein-coding 625883770 LOC116891093 40S ribosomal protein S8-like 1 25757012 25758599 - 116891093 MODEL JAAIVD010000025 pseudo 625883771 LOC116913118 magnesium-dependent phosphatase 1 12 69346490 69348216 + 30032202 116913118 MODEL JAAIVD010000007;XM_032917275 XP_032773166 protein-coding 625883781 Nudt16 nudix hydrolase 16 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); chloride ion binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN chromosome organization (ortholog); dITP catabolic process (ortholog); mRNA catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 8 96423548 96425032 - 30032202 116907742 MODEL JAAIVD010000027;XM_032910879 XP_032766770 U8 snoRNA-decapping enzyme protein-coding 625883788 Sh2b1 SH2B adaptor protein 1 INVOLVED IN cell motility (ortholog); lamellipodium assembly (ortholog); positive regulation of mitotic nuclear division (ortholog); PARTICIPATES IN leptin system pathway; ASSOCIATED WITH chromosome 16p11.2 deletion syndrome, 220-kb (ortholog); obesity (ortholog); Primary Ovarian Failure (ortholog) 2 75450312 75458798 + 30032202 116891524 MODEL JAAIVD010000001;XM_032892667;XM_032892668;XM_032892669;XM_032892670;XM_032892671;XM_032892672 XP_032748558;XP_032748559;XP_032748560;XP_032748561;XP_032748562;XP_032748563 SH2B adapter protein 1 protein-coding 625883821 Snx22 sorting nexin 22 ASSOCIATED WITH osteogenesis imperfecta (ortholog) 8 60403060 60405974 - 30032202 116906931 MODEL JAAIVD010000027;XM_032909856 XP_032765747 sorting nexin-22 protein-coding 625883831 Poglut3 protein O-glucosyltransferase 3 ENCODES a protein that exhibits UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog) 8 47366509 47384757 + 22301074;30032202 116907172 MODEL JAAIVD010000027;XM_032910126 XP_032766017 protein-coding 625883843 Dnajc10 DnaJ heat shock protein family (Hsp40) member C10 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); disulfide oxidoreductase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); protein folding in endoplasmic reticulum (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); endoplasmic reticulum lumen (ortholog) 5 57512267 57551975 + 22301074 116901565 MODEL JAAIVD010000023;XM_032903561 XP_032759452 dnaJ homolog subfamily C member 10 protein-coding 625883870 Yars1 tyrosyl-tRNA synthetase 1 ENCODES a protein that exhibits small molecule binding (ortholog); tyrosine-tRNA ligase activity (ortholog); INVOLVED IN protein poly-ADP-ribosylation (ortholog); response to starvation (ortholog); tyrosyl-tRNA aminoacylation (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 28923364 28952262 - 22301074;30032202 116896225 MODEL JAAIVD010000025;XM_032897285 XP_032753176 tyrosine--tRNA ligase, cytoplasmic protein-coding 625883887 F8 coagulation factor VIII INVOLVED IN blood coagulation, intrinsic pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aortic disease (ortholog); autoimmune disease (ortholog); autosomal hemophilia A (ortholog); FOUND IN extracellular space (ortholog) 15 34739555 34770244 - 22301074 116884349 MODEL JAAIVD010000010;XM_032885481 XP_032741372 protein-coding 625883916 Thumpd3 THUMP domain 3 tRNA guanosine methyltransferase ENCODES a protein that exhibits tRNA (guanine(6)-N2)-methyltransferase activity (ortholog); tRNA (guanine(7)-N2)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 33460557 33485862 - 22301074;30032202 116903427 MODEL JAAIVD010000024;XM_032905975;XM_032905976;XM_032905977 XP_032761866;XP_032761867;XP_032761868 THUMP domain containing 3;THUMP domain-containing protein 3 protein-coding 625883939 Txnrd3 thioredoxin reductase 3 ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN blastocyst formation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); colorectal adenoma (ortholog); colorectal carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 56697251 56727565 - 22301074;30032202 116903512 MODEL JAAIVD010000024;XM_032906117 XP_032762008 protein-coding 625883959 LOC116897522 small nucleolar RNA SNORA48 3 122319181 122319323 - 116897522 MODEL JAAIVD010000012;XR_004387538 snorna 625883962 Gne glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase ENCODES a protein that exhibits N-acylmannosamine kinase activity (ortholog); UDP-N-acetylglucosamine 2-epimerase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); glycosylation (ortholog); N-acetylneuraminate biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH distal myopathy with rimmed vacuoles (ortholog); French Type Sialuria (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 1 2441116 2481716 + 22301074;30032202 116890906 MODEL JAAIVD010000025;XM_032891529 XP_032747420 bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase protein-coding 625883978 Ankrd42 ankyrin repeat domain 42 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN nucleus (ortholog) 2 108551548 108603349 + 22301074 116891847 MODEL JAAIVD010000001;XM_032893216;XM_032893217 XP_032749107;XP_032749108 ankyrin repeat domain-containing protein 42 protein-coding 625883998 LOC116906918 collagen alpha-4(VI) chain-like 8 97290365 97385695 - 116906918 MODEL JAAIVD010000027;XM_032909842 XP_032765733 protein-coding 625884035 Foxk1 forkhead box K1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 10687922 10746335 - 22301074;30032202 116885443 MODEL JAAIVD010000004;XM_032886726 XP_032742617 forkhead box protein K1 protein-coding 625884048 LOC116887587 heat shock 70 kDa protein 1A-like 18 7022228 7027565 - 116887587 MODEL JAAIVD010000013 pseudo 625884049 LOC116910363 high mobility group protein B2-like 9 74175220 74180300 - 116910363 MODEL JAAIVD010000002 pseudo 625884050 LOC116908103 40S ribosomal protein S10-like 8 64246153 64246646 + 116908103 MODEL JAAIVD010000027 pseudo 625884051 LOC116885734 paired immunoglobulin-like type 2 receptor beta 16 15888556 15890531 + 30032202 116885734 MODEL JAAIVD010000004;XM_032887044 XP_032742935 protein-coding 625884057 LOC116884013 threonylcarbamoyladenosine tRNA methylthiotransferase-like 14 48380798 48412181 - 116884013 MODEL JAAIVD010000009;XM_032885252 XP_032741143 protein-coding 625884064 St6galnac6 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); glycoprotein metabolic process (ortholog); glycosphingolipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog) 5 3021332 3043034 - 22301074;30032202 116901139 MODEL JAAIVD010000023;XM_032902740;XM_032902741;XM_032902742;XM_032902744 XP_032758631;XP_032758632;XP_032758633;XP_032758635 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 6 protein-coding 625884089 Gpr21 G protein-coupled receptor 21 INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of multicellular organism growth (ortholog) 5 15279340 15280781 + 22301074 116901358 MODEL JAAIVD010000023;XM_032903210 XP_032759101 probable G-protein coupled receptor 21 protein-coding 625884094 LOC116910377 WAP four-disulfide core domain protein 5-like 9 86972663 86984601 - 22301074;30032202 116910377 MODEL JAAIVD010000002;XM_032914223 XP_032770114 protein-coding 625884102 LOC116894349 60S ribosomal protein L19-like 2 154863236 154864099 - 116894349 MODEL JAAIVD010000001 pseudo 625884103 LOC116902515 U7 small nuclear RNA 5 25058330 25058392 + 116902515 MODEL JAAIVD010000023;XR_004388124 snrna 625884106 Tmem161b transmembrane protein 161B INVOLVED IN regulation of cardiac muscle cell action potential (ortholog); regulation of heart rate (ortholog) 3 213663967 213745251 + 116897328 MODEL JAAIVD010000012;XM_032899082;XM_032899083;XM_032899084 XP_032754973;XP_032754974;XP_032754975 protein-coding 625884128 LOC116897716 uncharacterized LOC116897716 4 74736882 74879826 + 116897716 MODEL JAAIVD010000003;XR_004387624 ncrna 625884132 Fam89b family with sequence similarity 89 member B ENCODES a protein that exhibits transcription corepressor binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog) 2 1964314 1966522 + 30032202 116890698 MODEL JAAIVD010000001;XM_032891117 XP_032747008 leucine repeat adapter protein 25 protein-coding 625884138 LOC116894202 olfactory receptor 491 2 106332968 106333900 + 22301074;30032202 116894202 MODEL JAAIVD010000001;XM_032895915 XP_032751806 protein-coding 625884141 Hsp90aa1 heat shock protein 90 alpha family class A member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); CTP binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anaplastic large cell lymphoma (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) 7 128255520 128260875 - 22301074;30032202 116905477 MODEL JAAIVD010000026;XM_032908447 XP_032764338 heat shock protein HSP 90-alpha protein-coding 625884156 LOC116885231 cytochrome c oxidase subunit 6B1-like 16 24010893 24011196 + 116885231 MODEL JAAIVD010000004 pseudo 625884157 Aggf1 angiogenic factor with G-patch and FHA domains 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH syndactyly (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); perinuclear region of cytoplasm (ortholog) 3 200953012 200979296 + 22301074 116897279 MODEL JAAIVD010000012;XM_032899012 XP_032754903 angiogenic factor with G patch and FHA domains 1 protein-coding 625884175 LOC116906439 small nucleolar RNA SNORA17 7 48209193 48209324 + 116906439 MODEL JAAIVD010000026;XR_004388699 snorna 625884178 Draxin dorsal inhibitory axon guidance protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); axon guidance (ortholog); commissural neuron differentiation in spinal cord (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Parkinson's disease (ortholog); FOUND IN extracellular region (ortholog) 1 12663686 12677700 + 22301074;30032202 116886184 MODEL JAAIVD010000025;XM_032887557 XP_032743448 protein-coding 625884189 Smim35 small integral membrane protein 35 8 39775244 39783863 + 116908158 MODEL JAAIVD010000027;XM_032911459 XP_032767350 protein-coding 625884196 LOC116893892 apoptosis-associated speck-like protein containing a CARD 2 73906768 73907974 + 22301074 116893892 MODEL JAAIVD010000001;XM_032895611 XP_032751502 protein-coding 625884203 Bahcc1 BAH domain and coiled-coil containing 1 INVOLVED IN chromatin organization (ortholog); locomotory behavior (ortholog); neuron differentiation (ortholog) 9 63712549 63770760 - 22301074 116908862 MODEL JAAIVD010000002;XM_032912304 XP_032768195 BAH and coiled-coil domain-containing protein 1 protein-coding 625884234 LOC116894513 vomeronasal type-1 receptor 90-like 2 173813981 173814934 - 22301074;30032202 116894513 MODEL JAAIVD010000001;XM_032896214 XP_032752105 protein-coding 625884237 Atg10 autophagy related 10 ENCODES a protein that exhibits Atg12 conjugating enzyme activity (ortholog); Atg12 transferase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); ER overload response (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Breast Neoplasms (ortholog) 3 205162165 205286691 + 30032202 116896061 MODEL JAAIVD010000012;XM_032897052 XP_032752943 ubiquitin-like-conjugating enzyme ATG10 protein-coding 625884247 Senp7 SUMO specific peptidase 7 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); postsynaptic cytosol (ortholog) 4 40188021 40314270 + 30032202 116898902 MODEL JAAIVD010000003;XM_032900304 XP_032756195 sentrin-specific protease 7 protein-coding 625884275 Abcb4 ATP binding cassette subfamily B member 4 ENCODES a protein that exhibits ATPase-coupled transmembrane transporter activity (ortholog); ceramide floppase activity (ortholog); phosphatidylcholine floppase activity (ortholog); INVOLVED IN bile acid secretion (ortholog); cellular response to bile acid (ortholog); ceramide translocation (ortholog); PARTICIPATES IN multidrug resistance protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); cholangitis (ortholog); cholecystitis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 140576553 140792492 + 22301074;30032202 116904143 MODEL JAAIVD010000024;XM_032907035;XM_032907036;XM_032907037;XM_032907038 XP_032762926;XP_032762927;XP_032762928;XP_032762929 phosphatidylcholine translocator ABCB4 protein-coding 625884346 LOC116900460 olfactory receptor 4A15-like 5 71210576 71211529 - 22301074 116900460 MODEL JAAIVD010000023;XM_032902201 XP_032758092 protein-coding 625884350 Klhl38 kelch like family member 38 1 232858724 232867304 - 22301074 116890104 MODEL JAAIVD010000025;XM_032890851 XP_032746742 kelch-like protein 38 protein-coding 625884358 LOC116890268 arylacetamide deacetylase-like 4 1 14217902 14226649 + 22301074 116890268 MODEL JAAIVD010000025;XM_032890986 XP_032746877 protein-coding 625884364 LOC116892895 zinc finger protein 728-like 2 199539056 199607909 + 30032202 116892895 MODEL JAAIVD010000001;XM_032894806;XM_032894807 XP_032750697;XP_032750698 protein-coding 625884380 Ptp4a3 protein tyrosine phosphatase 4A3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); endothelial cell migration (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 246485116 246516705 + 22301074;30032202 116912465 MODEL JAAIVD010000025;XM_032916535;XM_032916540;XM_032916546 XP_032772426;XP_032772431;XP_032772437 protein tyrosine phosphatase type IVA 3 protein-coding 625884396 Ube2v2 ubiquitin conjugating enzyme E2 V2 INVOLVED IN DNA double-strand break processing (ortholog); error-free postreplication DNA repair (ortholog); negative regulation of neuron apoptotic process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); UBC13-MMS2 complex (ortholog) 4 910259 941249 - 30032202 116898603 MODEL JAAIVD010000003;XM_032899798;XM_032899799;XM_032899800 XP_032755689;XP_032755690;XP_032755691 ubiquitin-conjugating enzyme E2 variant 2 protein-coding 625884410 LOC116898775 cytochrome P450 4A12-like 1 41401498 41420196 + 22301074;30032202 116898775 MODEL JAAIVD010000025;XM_032900115 XP_032756006 protein-coding 625884424 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 30340082 30340152 - 116886807 MODEL JAAIVD010000011 trna 625884425 Rnf148 ring finger protein 148 6 115614012 115615396 + 116904041 MODEL JAAIVD010000024;XM_032906897 XP_032762788 protein-coding 625884430 LOC116906426 small nucleolar RNA SNORA32 7 80707707 80707824 + 116906426 MODEL JAAIVD010000026;XR_004388687 snorna 625884433 LOC116897111 eukaryotic translation initiation factor 4B-like 3 164796192 164798041 - 116897111 MODEL JAAIVD010000012;XR_004387398 pseudo 625884436 Slc10a3 solute carrier family 10 member 3 INVOLVED IN response to retinoic acid (ortholog) X 128374861 128378414 - 22301074;30032202 116888550 MODEL JAAIVD010000014;XM_032889859 XP_032745750 P3 protein protein-coding 625884442 LOC116889372 elongation factor 1-gamma-like 1 5020448 5027240 + 116889372 MODEL JAAIVD010000025 pseudo 625884443 LOC116892718 uncharacterized LOC116892718 2 179177615 179374613 - 116892718 MODEL JAAIVD010000001;XR_004386966 ncrna 625884449 LOC116897659 U4 spliceosomal RNA 3 30574961 30575063 - 116897659 MODEL JAAIVD010000012 pseudo 625884450 Sik1 salt inducible kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); cAMP response element binding protein binding (ortholog); INVOLVED IN anoikis (ortholog); cardiac muscle cell differentiation (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH Cold Injury (ortholog); developmental and epileptic encephalopathy 30 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 1997054 2008471 + 22301074;30032202 116887158 MODEL JAAIVD010000013;XM_032888705;XM_032888706 XP_032744596;XP_032744597 serine/threonine-protein kinase SIK1 protein-coding 625884471 Lhx1 LIM homeobox 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior axis specification (ortholog); ASSOCIATED WITH Female Urogenital Diseases (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) 9 86168800 86175595 + 22301074;30032202 116909971 MODEL JAAIVD010000002;XM_032913750 XP_032769641 LIM/homeobox protein Lhx1 protein-coding 625884480 LOC116885886 olfactory receptor 2AE1 16 15376825 15377756 - 22301074 116885886 MODEL JAAIVD010000004;XM_032887205 XP_032743096 protein-coding 625884483 LOC116910534 60S ribosomal protein L7a-like 9 2088891 2089734 + 116910534 MODEL JAAIVD010000002 pseudo 625884484 LOC116886596 metallothionein-1X-like 17 8098509 8116601 - 116886596 MODEL JAAIVD010000011 pseudo 625884485 Iqgap1 IQ motif containing GTPase activating protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN caveola assembly (ortholog); cell migration (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); axon (ortholog) 2 119431468 119523287 + 22301074;30032202 116891912 MODEL JAAIVD010000001;XM_032893334 XP_032749225 ras GTPase-activating-like protein IQGAP1 protein-coding 625884527 Bicd2 BICD cargo adaptor 2 ENCODES a protein that exhibits dynactin binding (ortholog); dynein complex binding (ortholog); dynein light intermediate chain binding (ortholog); INVOLVED IN centrosome localization (ortholog); microtubule anchoring at microtubule organizing center (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) 14 68329203 68372753 + 22301074;30032202 116883302 MODEL JAAIVD010000009;XM_032884349 XP_032740240 protein bicaudal D homolog 2 protein-coding 625884538 LOC116884770 uncharacterized LOC116884770 15 8811967 8815174 - 116884770 MODEL JAAIVD010000010;XR_004385894 ncrna 625884543 Gsn gelsolin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament capping (ortholog); actin filament depolymerization (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Liver Failure (ortholog); amyloidosis (ortholog); FOUND IN actin cap (ortholog); actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog) 5 330843 358236 - 22301074;30032202 116901102 MODEL JAAIVD010000023;XM_032902665 XP_032758556 protein-coding 625884564 LOC116885076 U4 spliceosomal RNA 15 61213462 61213620 + 116885076 MODEL JAAIVD010000010 pseudo 625884565 LOC116900240 fatty acid desaturase 2-like protein FADS2P1 5 62823383 62861601 - 22301074;30032202 116900240 MODEL JAAIVD010000023;XM_032901991 XP_032757882 protein-coding 625884579 LOC116885540 uncharacterized LOC116885540 16 41750573 41757360 + 116885540 MODEL JAAIVD010000004;XR_004386016;XR_004386017;XR_004386018;XR_004386019 ncrna 625884590 Tuba3d tubulin alpha 3d ASSOCIATED WITH Keratoconus 9 (ortholog); FOUND IN cilium (ortholog); microtubule cytoskeleton (ortholog) 10 8700766 8702088 + 22301074;30032202 116911238 MODEL JAAIVD010000005;XM_032915138 XP_032771029 tubulin alpha-3D chain protein-coding 625884594 Ubr2 ubiquitin protein ligase E3 component n-recognin 2 ENCODES a protein that exhibits histone H2A ubiquitin ligase activity (ortholog); L-leucine binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); heterochromatin formation (ortholog); male meiosis I (ortholog); FOUND IN chromatin (ortholog); ubiquitin ligase complex (ortholog) 4 82866601 82945676 + 22301074;30032202 116899091 MODEL JAAIVD010000003;XM_032900593;XM_032900594;XM_032900596;XM_032900597;XM_032900598;XM_032900599 XP_032756484;XP_032756485;XP_032756487;XP_032756488;XP_032756489;XP_032756490 E3 ubiquitin-protein ligase UBR2 protein-coding 625884662 LOC116889277 ferritin heavy chain-like X 44073155 44073821 + 116889277 MODEL JAAIVD010000014 pseudo 625884663 LOC116883336 uncharacterized protein C11orf98 homolog 14 52927982 52928591 - 116883336 MODEL JAAIVD010000009;XM_032884407 XP_032740298 protein-coding 625884667 Tomm20l translocase of outer mitochondrial membrane 20 like 7 84747003 84756992 + 22301074;30032202 116906121 MODEL JAAIVD010000026;XM_032909119 XP_032765010 TOMM20-like protein 1 protein-coding 625884674 Iqcf2 IQ motif containing F2 8 97824037 97824417 - 30032202 116908258 MODEL JAAIVD010000027;XM_032911511 XP_032767402 IQ domain-containing protein F2 protein-coding 625884677 LOC116888467 T-complex protein 1 subunit zeta-like 1 92535499 92537719 + 116888467 MODEL JAAIVD010000025 pseudo 625884678 Tomm40l translocase of outer mitochondrial membrane 40 like ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); preprotein binding (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 10 50383508 50387016 - 22301074;30032202 116911186 MODEL JAAIVD010000005;XM_032915054 XP_032770945 mitochondrial import receptor subunit TOM40B protein-coding 625884692 LOC116906639 myocardial zonula adherens protein-like 8 65775951 65888088 - 22301074;30032202 116906639 MODEL JAAIVD010000027;XM_032909416 XP_032765307 protein-coding 625884711 LOC116903566 probable N-acetyltransferase CML5 6 60481431 60482260 + 30032202 116903566 MODEL JAAIVD010000024;XM_032906185 XP_032762076 protein-coding 625884716 Atad1 ATPase family AAA domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN extraction of mislocalized protein from mitochondrial outer membrane (ortholog); learning (ortholog); memory (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); hyperekplexia 4 (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 32711279 32748948 - 22301074;30032202 116891095 MODEL JAAIVD010000001;XM_032891810 XP_032747701 ATPase family AAA domain-containing protein 1 protein-coding 625884730 Mrpl45 mitochondrial ribosomal protein L45 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 57057702 57069624 - 30032202 116909779 MODEL JAAIVD010000002;XM_032913472 XP_032769363 39S ribosomal protein L45, mitochondrial protein-coding 625884742 Kiaa0040 KIAA0040 ortholog 10 39360472 39364023 + 116911669 MODEL JAAIVD010000005;XM_032915624 XP_032771515 uncharacterized protein KIAA0040 homolog protein-coding 625884747 LOC116898520 proteasome subunit alpha type-7-like 4 135067635 135080929 + 116898520 MODEL JAAIVD010000003 pseudo 625884748 Crabp2 cellular retinoic acid binding protein 2 ENCODES a protein that exhibits cyclin binding (ortholog); retinoic acid binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); positive regulation of collateral sprouting (ortholog); retinoic acid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH methylmalonic acidemia (ortholog); Ovarian Neoplasms (ortholog); Recurrence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 3 65603749 65608755 - 30032202 116896707 MODEL JAAIVD010000012;XM_032898122 XP_032754013 cellular retinoic acid-binding protein 2 protein-coding 625884756 LOC116894259 olfactory receptor 6F1 2 115424085 115425011 - 22301074;30032202 116894259 MODEL JAAIVD010000001;XM_032895963 XP_032751854 protein-coding 625884759 Katnal2 katanin catalytic subunit A1 like 2 ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); spindle (ortholog) 15 55011661 55084804 + 22301074;30032202 116884557 MODEL JAAIVD010000010;XM_032885698 XP_032741589 katanin p60 ATPase-containing subunit A-like 2 protein-coding 625884779 Anks3 ankyrin repeat and sterile alpha motif domain containing 3 ASSOCIATED WITH Dwarfism (ortholog); Hydrops Fetalis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) 9 16943436 16964671 + 22301074;30032202 116909818 MODEL JAAIVD010000002;XM_032913530;XM_032913531;XM_032913532 XP_032769421;XP_032769422;XP_032769423 ankyrin repeat and SAM domain-containing protein 3 protein-coding 625884809 Trib2 tribbles pseudokinase 2 ENCODES a protein that exhibits nucleotide binding (ortholog); protein kinase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 7 35592314 35616593 - 22301074;30032202 116904890 MODEL JAAIVD010000026;XM_032907491 XP_032763382 tribbles homolog 2 protein-coding 625884816 LOC116913456 guanylate cyclase soluble subunit beta-2 12 61957171 62026036 + 22301074;30032202 116913456 MODEL JAAIVD010000007;XM_032917657;XM_032917658 XP_032773548;XP_032773549 protein-coding 625884841 LOC116893852 olfactory receptor 13G1-like 2 61379090 61380016 - 22301074 116893852 MODEL JAAIVD010000001;XM_032895572 XP_032751463 protein-coding 625884845 Caly calcyon neuron specific vesicular protein ENCODES a protein that exhibits clathrin light chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); clathrin coat assembly (ortholog); positive regulation of clathrin coat assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); attention deficit hyperactivity disorder (ortholog); essential hypertension (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) 2 61785139 61796100 + 22301074;30032202 116891352 MODEL JAAIVD010000001;XM_032892345;XM_032892346 XP_032748236;XP_032748237 neuron-specific vesicular protein calcyon protein-coding 625884858 Syt14 synaptotagmin 14 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 11 (ortholog); Spinocerebellar Ataxias (ortholog) 10 70849149 71080184 - 116911154 MODEL JAAIVD010000005;XM_032915009;XM_032915010;XM_032915011;XM_032915012;XM_032915013;XM_032915014 XP_032770900;XP_032770901;XP_032770902;XP_032770903;XP_032770904;XP_032770905 synaptotagmin-14 protein-coding 625884884 Krt222 keratin 222 9 55201179 55211387 + 22301074 116909695 MODEL JAAIVD010000002;XM_032913359;XM_032913360 XP_032769250;XP_032769251 keratin-like protein KRT222 protein-coding 625884897 Emb embigin INVOLVED IN cell adhesion (ortholog); plasma membrane lactate transport (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 3 179309178 179356724 + 30032202 116897175 MODEL JAAIVD010000012;XM_032898860 XP_032754751 protein-coding 625884910 Bcl2l11 BCL2 like 11 ENCODES a protein that exhibits dynein complex binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process involved in embryonic digit morphogenesis (ortholog); B cell homeostasis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); glomerulonephritis (ortholog); sclerosing cholangitis (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); BIM-BCL-2 complex (ortholog); BIM-BCL-xl complex (ortholog) 5 106918572 107080263 + 30032202 116901944 MODEL JAAIVD010000023;XM_032904177;XM_032904178 XP_032760068;XP_032760069 bcl-2-like protein 11 protein-coding 625884925 LOC116910229 olfactory receptor 2M3-like 9 31821187 31822125 + 22301074 116910229 MODEL JAAIVD010000002;XM_032914119 XP_032770010 protein-coding 625884928 Tomm34 translocase of outer mitochondrial membrane 34 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN protein targeting to mitochondrion (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 153906829 153923261 + 30032202 116902368 MODEL JAAIVD010000023;XM_032904863;XM_032904864 XP_032760754;XP_032760755 mitochondrial import receptor subunit TOM34 protein-coding 625884942 Kifc3 kinesin family member C3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell-cell adhesion (ortholog); Golgi organization (ortholog); microtubule-based process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); kinesin complex (ortholog) 17 1974346 2071545 - 22301074;30032202 116886181 MODEL JAAIVD010000011;XM_032887550;XM_032887551 XP_032743441;XP_032743442 kinesin-like protein KIFC3 protein-coding 625884970 LOC116894064 olfactory receptor 51A7-like 2 102869245 102870201 - 22301074 116894064 MODEL JAAIVD010000001;XM_032895787 XP_032751678 protein-coding 625884973 LOC116905467 uncharacterized LOC116905467 7 127209061 127223122 + 116905467 MODEL JAAIVD010000026;XR_004388539 ncrna 625884978 LOC116895501 small nuclear ribonucleoprotein G-like 1 28659482 28659743 + 116895501 MODEL JAAIVD010000025 pseudo 625884979 LOC116895953 serine/arginine repetitive matrix protein 1-like 3 139428501 139429795 + 116895953 MODEL JAAIVD010000012 pseudo 625884980 LOC116897458 U6 spliceosomal RNA 3 168933885 168933981 + 116897458 MODEL JAAIVD010000012 pseudo 625884981 Malsu1 mitochondrial assembly of ribosomal large subunit 1 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); INVOLVED IN negative regulation of mitochondrial translation (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 6 91891747 91900626 - 30032202 116903837 MODEL JAAIVD010000024;XM_032906554 XP_032762445 mitochondrial assembly of ribosomal large subunit protein 1 protein-coding 625884989 LOC116889704 type-1 restriction enzyme R protein-like 116889704 MODEL JAAIVD010000057;XM_032890586 XP_032746477 protein-coding 625884990 Myoc myocilin ENCODES a protein that exhibits fibronectin binding (ortholog); frizzled binding (ortholog); myosin light chain binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to nerve growth factor stimulus (ortholog); clustering of voltage-gated sodium channels (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); buphthalmos (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 10 41900497 41911292 + 30032202 116911344 MODEL JAAIVD010000005;XM_032915260 XP_032771151 protein-coding 625884997 LOC116904976 non-POU domain-containing octamer-binding protein-like 7 49435293 49436828 + 116904976 MODEL JAAIVD010000026 pseudo 625884998 Tex13a testis expressed 13A X 90599834 90601100 + 116888369 MODEL JAAIVD010000014;XM_032889637 XP_032745528 testis-expressed protein 13A protein-coding 625885003 Gcm1 glial cells missing transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte fate commitment (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 8 72296251 72309422 + 30032202 116907931 MODEL JAAIVD010000027;XM_032911145 XP_032767036 chorion-specific transcription factor GCMa protein-coding 625885013 LOC116886146 zinc finger BED domain-containing protein 4-like 1 215329479 215340568 - 116886146 MODEL JAAIVD010000025 pseudo 625885014 Acacb acetyl-CoA carboxylase beta ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); D-glucose import (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cardiac Fibrosis (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 39714187 39801434 - 22301074;30032202 116885538 MODEL JAAIVD010000004;XM_032886835 XP_032742726 acetyl-CoA carboxylase 2 protein-coding 625885070 Mtnr1a melatonin receptor 1A ENCODES a protein that exhibits hormone binding (ortholog); melatonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); camera-type eye development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); Huntington's disease (ortholog); FOUND IN neuronal cell body (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 13 42764680 42783905 - 22301074;30032202 116914896 MODEL JAAIVD010000008;XM_032919339 XP_032775230 melatonin receptor type 1A protein-coding 625885076 Tmem192 transmembrane protein 192 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 13 24152699 24172424 - 30032202 116914730 MODEL JAAIVD010000008;XM_032919163 XP_032775054 protein-coding 625885086 Plek2 pleckstrin 2 ENCODES a protein that exhibits phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell projection organization (ortholog); positive regulation of plasma membrane bounded cell projection assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 7 93000606 93020797 - 22301074;30032202 116905200 MODEL JAAIVD010000026;XM_032907996 XP_032763887 pleckstrin-2 protein-coding 625885100 LOC116903186 T-cell surface glycoprotein YE1/48-like 6 17224389 17262092 - 116903186 MODEL JAAIVD010000024;XM_032905559;XM_032905560 XP_032761450;XP_032761451 killer cell lectin-like receptor 4 protein-coding 625885111 LOC116895802 uncharacterized LOC116895802 3 65347199 65349746 - 116895802 MODEL JAAIVD010000012;XM_032896942 XP_032752833 uncharacterized protein LOC116895802 protein-coding 625885115 LOC116906153 enhancer of rudimentary homolog 7 97847234 97850847 + 116906153 MODEL JAAIVD010000026 pseudo 625885116 Dmrta1 DMRT like family A1 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male mating behavior (ortholog); ovarian follicle development (ortholog) 1 64600641 64607177 - 22301074;30032202 116887913 MODEL JAAIVD010000025;XM_032889385 XP_032745276 doublesex- and mab-3-related transcription factor A1 protein-coding 625885122 Sox12 SRY-box transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of regulatory T cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spinal cord development (ortholog); FOUND IN nucleoplasm (ortholog); protein-DNA complex (ortholog) 5 131710307 131713483 - 22301074;30032202 116902121 MODEL JAAIVD010000023;XM_032904436 XP_032760327 transcription factor SOX-12 protein-coding 625885127 LOC116898027 60S ribosomal protein L5-like 4 80605073 80606630 + 116898027 MODEL JAAIVD010000003 pseudo 625885128 LOC116899912 small nucleolar RNA U13 4 30506129 30506236 + 116899912 MODEL JAAIVD010000003;XR_004387884 snorna 625885131 Fabp3 fatty acid binding protein 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fatty acid binding (ortholog); icosatetraenoic acid binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cholesterol homeostasis (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Down syndrome (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); sarcoplasm (ortholog) 1 27839923 27846775 - 30032202 116895957 MODEL JAAIVD010000025;XM_032897011 XP_032752902 fatty acid-binding protein, heart protein-coding 625885139 LOC116915039 40S ribosomal protein S10-like 13 20415744 20416236 - 116915039 MODEL JAAIVD010000008 pseudo 625885140 LOC116901493 uncharacterized LOC116901493 5 47174286 47185800 - 116901493 MODEL JAAIVD010000023;XR_004388001 ncrna 625885145 Selenon selenoprotein N INVOLVED IN ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); ASSOCIATED WITH congenital myopathy 4A (ortholog); congenital structural myopathy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 1 23700777 23715338 + 22301074;30032202 116894683 MODEL JAAIVD010000025;XM_032896387 XP_032752278 protein-coding 625885161 Pxdn peroxidasin ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heme binding (ortholog); laminin-1 binding (ortholog); INVOLVED IN angiogenesis (ortholog); basement membrane assembly (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); anterior segment dysgenesis 7 (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 7 43374885 43452944 + 22301074;30032202 116904938 MODEL JAAIVD010000026;XM_032907578 XP_032763469 peroxidasin homolog protein-coding 625885188 LOC116907247 60S ribosomal protein L7a-like 8 81133067 81133873 - 116907247 MODEL JAAIVD010000027 pseudo 625885189 LOC116904226 histone-lysine N-methyltransferase 2C-like 6 154508446 154513686 - 116904226 MODEL JAAIVD010000024;XM_032907164 XP_032763055 protein-coding 625885196 Znf536 zinc finger protein 536 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); retinoic acid-responsive element binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH High Myopia (ortholog); Neurodevelopmental Disorders (ortholog); renal cell carcinoma (ortholog) 2 160866606 161331225 + 30032202 116892253 MODEL JAAIVD010000001;XM_032893829;XM_032893830;XM_032893831;XM_032893832;XM_032893833;XM_032893834 XP_032749720;XP_032749721;XP_032749722;XP_032749723;XP_032749724;XP_032749725 protein-coding 625885221 Nr2c2 nuclear receptor subfamily 2 group C member 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH endometriosis (ortholog); Isolated Noncompaction of the Ventricular Myocardium (ortholog); FOUND IN nucleoplasm (ortholog) 6 54800381 54851798 - 22301074;30032202 116903491 MODEL JAAIVD010000024;XM_032906069;XM_032906070;XM_032906071;XM_032906072;XM_032906073;XM_032906074;XM_032906076;XM_032906077;XM_032906078;XM_032906079;XM_032906080 XP_032761960;XP_032761961;XP_032761962;XP_032761963;XP_032761964;XP_032761965;XP_032761967;XP_032761968;XP_032761969;XP_032761970;XP_032761971 protein-coding 625885266 Clca2 chloride channel accessory 2 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 3 15762862 15790836 + 22301074;30032202 116896184 MODEL JAAIVD010000012;XM_032897223 XP_032753114 calcium-activated chloride channel regulator 2 protein-coding 625885283 Nhp2 NHP2 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomerase RNA localization to Cajal body (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 2 (ortholog); dyskeratosis congenita (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); telomerase holoenzyme complex (ortholog) 9 34208138 34211773 + 22301074;30032202 116910042 MODEL JAAIVD010000002;XM_032913829 XP_032769720 H/ACA ribonucleoprotein complex subunit 2 protein-coding 625885291 LOC116901014 pyrroline-5-carboxylate reductase 3-like 5 123928546 123930028 + 116901014 MODEL JAAIVD010000023 pseudo 625885292 LOC116898427 brain acid soluble protein 1-like 4 90883973 90884837 + 116898427 MODEL JAAIVD010000003 pseudo 625885293 Ttc28 tetratricopeptide repeat domain 28 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN midbody (ortholog) 16 42686629 43093645 - 22301074 116885273 MODEL JAAIVD010000004;XM_032886506 XP_032742397 tetratricopeptide repeat protein 28 protein-coding 625885319 Gsg1l GSG1 like INVOLVED IN regulation of AMPA receptor activity (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); FOUND IN asymmetric synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 2 75851907 76055224 + 30032202 116891533 MODEL JAAIVD010000001;XM_032892685 XP_032748576 germ cell-specific gene 1-like protein protein-coding 625885330 LOC116890400 F-box/WD repeat-containing protein 2-like 1 269310173 269310667 - 116890400 MODEL JAAIVD010000025 pseudo 625885331 Micos13 mitochondrial contact site and cristae organizing system subunit 13 INVOLVED IN cristae formation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 37 (ortholog); genetic disease (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial crista junction (ortholog); mitochondrial inner membrane (ortholog) 4 87982335 87984423 - 30032202 116899186 MODEL JAAIVD010000003;XM_032900766 XP_032756657 MICOS complex subunit MIC13 protein-coding 625885339 LOC116889189 60S ribosomal protein L27-like X 107889926 107890296 - 116889189 MODEL JAAIVD010000014 pseudo 625885340 LOC116886796 U6 spliceosomal RNA 17 14988553 14988656 + 116886796 MODEL JAAIVD010000011;XR_004386186 snrna 625885343 LOC116902785 60S ribosomal protein L9-like 1 118871800 118873020 + 116902785 MODEL JAAIVD010000025 pseudo 625885344 Hsd17b1 hydroxysteroid 17-beta dehydrogenase 1 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); estradiol binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); endometriosis (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytosol (ortholog) 9 60372151 60374534 + 22301074 116908876 MODEL JAAIVD010000002;XM_032912321 XP_032768212 estradiol 17-beta-dehydrogenase 1 protein-coding 625885353 LOC116893337 myeloid cell surface antigen CD33-like 2 155940909 155951081 + 116893337 MODEL JAAIVD010000001 pseudo 625885354 Slc29a3 solute carrier family 29 member 3 ENCODES a protein that exhibits cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cytidine transport (ortholog); dopamine transport (ortholog); ASSOCIATED WITH acanthosis nigricans (ortholog); Asrar Facharzt Haque Syndrome (ortholog); congenital heart disease (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 18 26534701 26572612 - 22301074;30032202 116887208 MODEL JAAIVD010000013;XM_032888764 XP_032744655 equilibrative nucleoside transporter 3 protein-coding 625885364 LOC116907474 olfactory receptor 147-like 8 31835399 31836340 + 22301074;30032202 116907474 MODEL JAAIVD010000027;XM_032910460 XP_032766351 protein-coding 625885368 Gpr143 G protein-coupled receptor 143 ENCODES a protein that exhibits dopamine binding (ortholog); G protein-coupled receptor activity (ortholog); L-DOPA binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); melanosome localization (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Albinism (ortholog); congenital nystagmus 6 (ortholog); Foveal Hypoplasia (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); Golgi apparatus (ortholog) X 6184977 6209991 - 22301074;30032202 116888959 MODEL JAAIVD010000014;XM_032890187 XP_032746078 G-protein coupled receptor 143 protein-coding 625885380 LOC116890413 small nucleolar RNA SNORA73 family 1 137235559 137235736 + 116890413 MODEL JAAIVD010000025;XR_004386614 snorna 625885383 Ptprq protein tyrosine phosphatase receptor type Q INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 73 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84A (ortholog); FOUND IN apical plasma membrane (ortholog); stereocilium base (ortholog); stereocilium bundle (ortholog) 1 185793326 185971582 - 22301074 116890009 MODEL JAAIVD010000025;XM_032890794 XP_032746685 phosphatidylinositol phosphatase PTPRQ protein-coding 625885432 Tmem87b transmembrane protein 87B INVOLVED IN retrograde transport, endosome to Golgi (ortholog) 5 107607367 107640828 + 22301074;30032202 116901948 MODEL JAAIVD010000023;XM_032904181;XM_032904182 XP_032760072;XP_032760073 protein-coding 625885457 Ube4b ubiquitination factor E4B ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); enzyme binding (ortholog); INVOLVED IN granzyme-mediated apoptotic signaling pathway (ortholog); neuron projection development (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Developmental Disease (ortholog); Neurobehavioral Manifestations (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 11342505 11443976 + 22301074;30032202 116892644 MODEL JAAIVD010000025;XM_032894467;XM_032894474 XP_032750358;XP_032750365 ubiquitin conjugation factor E4 B protein-coding 625885494 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 44748127 44748198 + 116911923 MODEL JAAIVD010000005 trna 625885495 LOC116906041 peroxiredoxin-1-like 7 43841112 43863172 + 116906041 MODEL JAAIVD010000026 pseudo 625885496 LOC116893625 protein transport protein Sec61 subunit gamma-like 2 8652562 8653037 + 116893625 MODEL JAAIVD010000001 pseudo 625885497 LOC116884632 28S ribosomal protein S21, mitochondrial-like 15 52238383 52238710 - 116884632 MODEL JAAIVD010000010 pseudo 625885498 Pik3r4 phosphoinositide-3-kinase regulatory subunit 4 INVOLVED IN autophagosome maturation (ortholog); cellular response to glucose starvation (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; phosphoinositide metabolic pathway; FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 8 96924882 96979175 + 22301074;30032202 116907452 MODEL JAAIVD010000027;XM_032910437 XP_032766328 phosphoinositide 3-kinase regulatory subunit 4 protein-coding 625885522 LOC116912294 60 kDa heat shock protein, mitochondrial-like 11 25317304 25319034 - 116912294 MODEL JAAIVD010000006 pseudo 625885523 LOC116893243 actin, cytoplasmic 2-like 2 125808900 125809586 - 116893243 MODEL JAAIVD010000001 pseudo 625885524 Nr2c2ap nuclear receptor 2C2 associated protein FOUND IN nucleoplasm (ortholog) 13 12397849 12399960 + 116914443 MODEL JAAIVD010000008;XM_032918743;XM_032918744 XP_032774634;XP_032774635 nuclear receptor 2C2-associated protein protein-coding 625885538 LOC116912977 small nucleolar RNA SNORA17 11 65710012 65710142 + 116912977 MODEL JAAIVD010000006;XR_004389542 snorna 625885541 Ddx51 DEAD-box helicase 51 ASSOCIATED WITH malignant mesothelioma (ortholog) 16 43687830 43692591 - 22301074;30032202 116885508 MODEL JAAIVD010000004;XM_032886800 XP_032742691 ATP-dependent RNA helicase DDX51 protein-coding 625885560 LOC116888010 interferon alpha-1 1 65514442 65515002 - 22301074;30032202 116888010 MODEL JAAIVD010000025;XM_032889427 XP_032745318 protein-coding 625885563 LOC116890068 cytochrome P450 2D1-like 1 252133928 252136807 - 116890068 MODEL JAAIVD010000025 pseudo 625885564 Ncapd2 non-SMC condensin I complex subunit D2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN mitotic chromosome condensation (ortholog); positive regulation of chromosome condensation (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary autosomal recessive microcephaly 21 (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); condensed chromosome (ortholog) 6 22710429 22731332 + 22301074;30032202 116903256 MODEL JAAIVD010000024;XM_032905638 XP_032761529 condensin complex subunit 1 protein-coding 625885599 LOC116897613 small nucleolar RNA SNORA17 3 44827595 44827715 + 116897613 MODEL JAAIVD010000012 pseudo 625885600 Ndufa13 NADH:ubiquinone oxidoreductase subunit A13 INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to retinoic acid (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 13 12162087 12169387 - 116914542 MODEL JAAIVD010000008;XM_032918874 XP_032774765 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13 protein-coding 625885608 LOC116912215 40S ribosomal protein S12-like 11 89068764 89069484 - 22301074;30032202 116912215 MODEL JAAIVD010000006;XM_032916163 XP_032772054 protein-coding 625885612 Srpk1 SRSF protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); intracellular signal transduction (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 5238597 5275243 + 22301074;30032202 116887676 MODEL JAAIVD010000013;XM_032889274 XP_032745165 protein-coding 625885632 LOC116894421 keratin-associated protein 20-2-like 2 158822096 158822263 + 116894421 MODEL JAAIVD010000001;XM_032896126 XP_032752017 protein-coding 625885635 LOC116895032 small nucleolar RNA SNORA17 2 107928039 107928167 + 116895032 MODEL JAAIVD010000001;XR_004387218 snorna 625885638 Slc1a1 solute carrier family 1 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); cysteine transmembrane transporter activity (ortholog); D-aspartate transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); behavioral fear response (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Atrophy (ortholog); autism spectrum disorder (ortholog); brain disease (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) 2 28896050 28976447 + 30032202 116891064 MODEL JAAIVD010000001;XM_032891770 XP_032747661 excitatory amino acid transporter 3 protein-coding 625885654 Tmco1 transmembrane and coiled-coil domains 1 ENCODES a protein that exhibits calcium channel activity (ortholog); ribosome binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); ER overload response (ortholog); ASSOCIATED WITH bone development disease (ortholog); combined T cell and B cell immunodeficiency (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) 10 46624672 46648369 + 22301074;30032202 116911352 MODEL JAAIVD010000005;XM_032915272 XP_032771163 calcium load-activated calcium channel protein-coding 625885665 Snx2 sorting nexin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN lamellipodium morphogenesis (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) 15 78543925 78585519 - 22301074;30032202 116884432 MODEL JAAIVD010000010;XM_032885520;XM_032885521 XP_032741411;XP_032741412 sorting nexin-2 protein-coding 625885686 Pdk2 pyruvate dehydrogenase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); cellular response to reactive oxygen species (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH cardiomyopathy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 59342026 59356903 + 30032202 116909545 MODEL JAAIVD010000002;XM_032913160;XM_032913161 XP_032769051;XP_032769052 pyruvate dehydrogenase kinase, isozyme 2 protein-coding 625885705 Dmrtc2 DMRT like family C2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN heterochromatin organization (ortholog); male meiosis I (ortholog); spermatid nucleus elongation (ortholog); FOUND IN XY body (ortholog) 2 169827036 169834283 - 22301074;30032202 116894482 MODEL JAAIVD010000001;XM_032896193 XP_032752084 doublesex- and mab-3-related transcription factor C2 protein-coding 625885718 Aldh7a1 aldehyde dehydrogenase 7 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); betaine-aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; choline metabolic pathway; glutaric aciduria type I pathway; ASSOCIATED WITH benign neonatal seizures (ortholog); bone disease (ortholog); coloboma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 15 75264713 75297436 + 30032202 116884677 MODEL JAAIVD010000010;XM_032885852 XP_032741743 alpha-aminoadipic semialdehyde dehydrogenase protein-coding 625885740 LOC116899023 heterogeneous nuclear ribonucleoprotein A1-like 4 55825190 55826102 - 116899023 MODEL JAAIVD010000003 pseudo 625885741 Helq helicase, POLQ like ENCODES a protein that exhibits single-stranded 3'-5' DNA helicase activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleus (ortholog); site of DNA damage (ortholog) 11 10979647 11022794 - 22301074 116912146 MODEL JAAIVD010000006;XM_032916061 XP_032771952 helicase POLQ-like protein-coding 625885763 Ncdn neurochondrin INVOLVED IN bone resorption (ortholog); neuron projection development (ortholog); regulation of neuronal synaptic plasticity (ortholog); ASSOCIATED WITH Floating-Harbor syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH INFANTILE EPILEPTIC SPASMS (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) 1 31546673 31556252 + 30032202 116896564 MODEL JAAIVD010000025;XM_032897772;XM_032897780;XM_032897788 XP_032753663;XP_032753671;XP_032753679 protein-coding 625885784 Rala RAS like proto-oncogene A ENCODES a protein that exhibits ATPase binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); GDP binding (ortholog); INVOLVED IN establishment of protein localization to mitochondrion (ortholog); membrane raft localization (ortholog); neural tube closure (ortholog); ASSOCIATED WITH genetic disease (ortholog); HIATT-NEU-COOPER NEURODEVELOPMENTAL SYNDROME (ortholog); intellectual disability (ortholog); FOUND IN cell surface (ortholog); cleavage furrow (ortholog); endocytic vesicle (ortholog) 14 36445579 36458818 + 22301074;30032202 116883417 MODEL JAAIVD010000009;XM_032884545 XP_032740436 ras-related protein Ral-A protein-coding 625885792 Sephs1 selenophosphate synthetase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) 14 11245560 11271881 + 22301074;30032202 116883304 MODEL JAAIVD010000009;XM_032884351;XM_032884352;XM_032884353 XP_032740242;XP_032740243;XP_032740244 selenide, water dikinase 1 protein-coding 625885812 Mef2a myocyte enhancer factor 2A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH Coronary Artery Disease, Autosomal Dominant 1 (ortholog); dilated cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 132964093 133103696 + 22301074;30032202 116891984 MODEL JAAIVD010000001;XM_032893429;XM_032893430;XM_032893431;XM_032893432;XM_032893434 XP_032749320;XP_032749321;XP_032749322;XP_032749323;XP_032749325 myocyte-specific enhancer factor 2A protein-coding 625885839 Prss54 serine protease 54 17 2395904 2408907 - 22301074;30032202 116886482 MODEL JAAIVD010000011;XM_032887985 XP_032743876 inactive serine protease 54 protein-coding 625885850 Fam217b family with sequence similarity 217 member B FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 155482282 155490042 + 116902395 MODEL JAAIVD010000023;XM_032904912;XM_032904913;XM_032904915 XP_032760803;XP_032760804;XP_032760806 protein FAM217B protein-coding 625885865 Sesn1 sestrin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); GATOR2 complex (ortholog) 18 41477253 41582108 + 22301074;30032202 116886914 MODEL JAAIVD010000013;XM_032888385;XM_032888386 XP_032744276;XP_032744277 sestrin-1 protein-coding 625885882 LOC116889994 glyceraldehyde-3-phosphate dehydrogenase-like 1 176135276 176136252 + 116889994 MODEL JAAIVD010000025 pseudo 625885883 LOC116900884 olfactory receptor 4P4-like 5 69894754 69897105 + 116900884 MODEL JAAIVD010000023 pseudo 625885884 LOC116889950 olfactory receptor 6C75-like 1 161596059 161597026 - 116889950 MODEL JAAIVD010000025 pseudo 625885885 LOC116884846 40S ribosomal protein S9-like 15 40560820 40562906 + 116884846 MODEL JAAIVD010000010 pseudo 625885886 LOC116910198 uncharacterized LOC116910198 9 56767260 56783910 - 116910198 MODEL JAAIVD010000002;XR_004389142 ncrna 625885891 LOC116912936 U7 small nuclear RNA 11 72308157 72308220 + 116912936 MODEL JAAIVD010000006;XR_004389506 snrna 625885894 Pou4f1 POU class 4 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell migration in hindbrain (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); ATAXIA, INTENTION TREMOR, AND HYPOTONIA SYNDROME, CHILDHOOD-ONSET (ortholog); Uterine Cervical Dysplasia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); neuron projection (ortholog) 12 20340661 20342601 + 22301074;30032202 116913474 MODEL JAAIVD010000007;XM_032917676 XP_032773567 POU domain, class 4, transcription factor 1 protein-coding 625885898 LOC116913939 ferritin light chain 1-like 12 67059141 67059691 - 116913939 MODEL JAAIVD010000007 pseudo 625885899 LOC116910424 40S ribosomal protein S10-like 9 669395 669872 + 116910424 MODEL JAAIVD010000002 pseudo 625885900 LOC116888985 activated RNA polymerase II transcriptional coactivator p15-like 1 112284063 112284664 + 116888985 MODEL JAAIVD010000025 pseudo 625885901 LOC116894599 formyl peptide receptor-related sequence 3-like 2 181701312 181702316 + 28652375;30032202 116894599 A0A220QSC2 MODEL JAAIVD010000001;MF175624;XM_032896316 ASK09534;XP_032752207 Fpr-rs3 protein-coding 625885904 Psma4 proteasome 20S subunit alpha 4 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 49030754 49036832 + 22301074;2249692;30032202 116907023 MODEL JAAIVD010000027;X55986;XM_032909963 CAA39458;XP_032765854 multicatalytic proteinase subunit L;proteasome subunit alpha type-4 protein-coding 625885916 LOC116911137 40S ribosomal protein S3-like 10 30933406 30934150 + 22301074;30032202 116911137 MODEL JAAIVD010000005;XM_032914988 XP_032770879 protein-coding 625885920 LOC116909255 mRNA turnover protein 4 homolog 9 11286849 11287505 + 116909255 MODEL JAAIVD010000002 pseudo 625885921 LOC116902533 small nucleolar RNA SNORA65 5 2667119 2667248 - 116902533 MODEL JAAIVD010000023;XR_004388137 snorna 625885924 Alg12 ALG12 alpha-1,6-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ig (ortholog); genetic disease (ortholog) 1 258127541 258142315 - 30032202 116914834 MODEL JAAIVD010000025;XM_032919292;XM_032919297 XP_032775183;XP_032775188 dol-P-Man:Man(7)GlcNAc(2)-PP-Dol alpha-1,6-mannosyltransferase protein-coding 625885941 Ankmy2 ankyrin repeat and MYND domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH High Myopia (ortholog) 7 49421683 49470458 + 22301074 116904975 MODEL JAAIVD010000026;XM_032907656 XP_032763547 ankyrin repeat and MYND domain-containing protein 2 protein-coding 625885955 Ceacam1 CEA cell adhesion molecule 1 ENCODES a protein that exhibits actin binding (ortholog); bile acid transmembrane transporter activity (ortholog); calmodulin binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); blood vessel development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 2 169244617 169261331 + 30032202 116892459 MODEL JAAIVD010000001;XM_032894175 XP_032750066 carcinoembryonic antigen-related cell adhesion molecule 1 protein-coding 625885968 Dclk2 doublecortin like kinase 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase activity (ortholog); INVOLVED IN hippocampus development (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of protein localization to nucleus (ortholog) 3 66657205 66786050 + 22301074 116896723 MODEL JAAIVD010000012;XM_032898142;XM_032898143;XM_032898144;XM_032898145 XP_032754033;XP_032754034;XP_032754035;XP_032754036 serine/threonine-protein kinase DCLK2 protein-coding 625885993 Ubap2l ubiquitin associated protein 2 like INVOLVED IN binding of sperm to zona pellucida (ortholog); hematopoietic stem cell homeostasis (ortholog); positive regulation of stress granule assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); NEURODEVELOPMENTAL DISORDER WITH IMPAIRED LANGUAGE, BEHAVIORAL ABNORMALITIES, AND DYSMORPHIC FACIES (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN PcG protein complex (ortholog) 3 63591287 63646506 + 22301074;30032202 116896625 MODEL JAAIVD010000012;XM_032897901;XM_032897902;XM_032897903;XM_032897904;XM_032897905;XM_032897906;XM_032897907;XM_032897908;XM_032897909;XM_032897910;XM_032897911;XM_032897914;XM_032897915;XM_032897916;XM_032897917;XM_032897918;XM_032897919;XM_032897920;XM_032897921;XM_032897922;XM_032897923;XM_032897924;XM_032897925;XM_032897926;XM_032897927;XM_032897928;XM_032897930;XM_032897931;XM_032897932;XM_032897933;XM_032897934 XP_032753792;XP_032753793;XP_032753794;XP_032753795;XP_032753796;XP_032753797;XP_032753798;XP_032753799;XP_032753800;XP_032753801;XP_032753802;XP_032753805;XP_032753806;XP_032753807;XP_032753808;XP_032753809;XP_032753810;XP_032753811;XP_032753812;XP_032753813;XP_032753814;XP_032753815;XP_032753816;XP_032753817;XP_032753818;XP_032753819;XP_032753821;XP_032753822;XP_032753823;XP_032753824;XP_032753825 ubiquitin-associated protein 2-like protein-coding 625886071 LOC116914465 uncharacterized LOC116914465 13 13828203 13831771 - 116914465 MODEL JAAIVD010000008;XR_004389748 ncrna 625886076 Tinagl1 tubulointerstitial nephritis antigen like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); laminin binding (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN cytoplasm (ortholog) 1 27972495 27982481 + 22301074;30032202 116895977 MODEL JAAIVD010000025;XM_032897017 XP_032752908 tubulointerstitial nephritis antigen-like protein-coding 625886092 Ndufab1 NADH:ubiquinone oxidoreductase subunit AB1 ENCODES a protein that exhibits mitochondrial large ribosomal subunit binding (ortholog); structural molecule activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); protein lipoylation (ortholog); FOUND IN mitochondrial [2Fe-2S] assembly complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 79728910 79738956 + 22301074;30032202 116891561 MODEL JAAIVD010000001;XM_032892741 XP_032748632 acyl carrier protein, mitochondrial protein-coding 625886101 LOC116900543 olfactory receptor 4K3-like 5 89702063 89702998 - 22301074 116900543 MODEL JAAIVD010000023;XM_032902271 XP_032758162 protein-coding 625886104 LOC116910707 small nucleolar RNA SNORA17 9 13603159 13603290 - 116910707 MODEL JAAIVD010000002;XR_004389234 snorna 625886107 LOC116914144 small nucleolar RNA SNORA17 12 23995665 23995795 + 116914144 MODEL JAAIVD010000007;XR_004389701 snorna 625886110 Hsf4 heat shock transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 5 multiple types (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog) 17 24996938 25002777 + 22301074 116886367 MODEL JAAIVD010000011;XM_032887828;XM_032887829;XM_032887830 XP_032743719;XP_032743720;XP_032743721 heat shock factor protein 4 protein-coding 625886134 Gfpt1 glutamine--fructose-6-phosphate transaminase 1 ENCODES a protein that exhibits amino acid binding (ortholog); carbohydrate binding (ortholog); glutamine-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); circadian regulation of gene expression (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 12 (ortholog); congenital myasthenic syndrome 4C (ortholog) 6 59220396 59266164 - 22301074;30032202 116903541 MODEL JAAIVD010000024;XM_032906155 XP_032762046 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1 protein-coding 625886157 LOC116901053 ferritin light chain 1-like 5 135753075 135753678 + 116901053 MODEL JAAIVD010000023 pseudo 625886158 LOC116902956 vomeronasal type-1 receptor 101-like 6 124269411 124271749 - 22301074;30032202 116902956 MODEL JAAIVD010000024;XM_032905282 XP_032761173 protein-coding 625886162 Smpd2 sphingomyelin phosphodiesterase 2 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide metabolic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN caveola (ortholog); plasma membrane (ortholog) 18 41180020 41183272 - 30032202 116886946 MODEL JAAIVD010000013;XM_032888445 XP_032744336 protein-coding 625886176 Vps25 vacuolar protein sorting 25 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) 9 60558374 60563744 + 22301074;30032202 116909560 MODEL JAAIVD010000002;XM_032913178 XP_032769069 vacuolar protein-sorting-associated protein 25 protein-coding 625886186 LOC116900010 histo-blood group ABO system transferase 2-like 5 9939893 9944201 - 116900010 MODEL JAAIVD010000023;XR_004387909 pseudo 625886191 Nfs1 NFS1 cysteine desulfurase ENCODES a protein that exhibits cysteine desulfurase activity (ortholog); protein homodimerization activity (ortholog); sulfur carrier activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 52 (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) 5 135482204 135503354 - 22301074;30032202 116902198 MODEL JAAIVD010000023;XM_032904564 XP_032760455 cysteine desulfurase, mitochondrial protein-coding 625886208 Lrrc30 leucine rich repeat containing 30 4 177287208 177288352 - 22301074 116898290 MODEL JAAIVD010000003;XM_032899642 XP_032755533 leucine-rich repeat-containing protein 30 protein-coding 625886212 LOC116914320 nuclear receptor corepressor 1-like 13 44203157 44227034 + 116914320 MODEL JAAIVD010000008 pseudo 625886213 Syndig1l synapse differentiation inducing 1 like FOUND IN Golgi apparatus (ortholog) 7 98784625 98806869 - 22301074;30032202 116905276 MODEL JAAIVD010000026;XM_032908136 XP_032764027 synapse differentiation-inducing gene protein 1-like protein-coding 625886221 LOC116893435 glyceraldehyde-3-phosphate dehydrogenase-like 2 175982042 175983103 + 116893435 MODEL JAAIVD010000001 pseudo 625886222 LOC116899834 small nucleolar RNA SNORA48 4 147185192 147185328 - 116899834 MODEL JAAIVD010000003 pseudo 625886223 Klf1 KLF transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); chromatin remodeling (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 15384052 15387205 - 30032202 116886259 MODEL JAAIVD010000011;XM_032887679;XM_032887681 XP_032743570;XP_032743572 Krueppel-like factor 1;Kruppel like factor 1 protein-coding 625886233 Ptprs protein tyrosine phosphatase receptor type S ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN cerebellum development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); NATURAL KILLER CELL ENTEROPATHY (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 4 87802902 87863350 - 22301074 116899182 MODEL JAAIVD010000003;XM_032900756 XP_032756647 receptor-type tyrosine-protein phosphatase S protein-coding 625886272 Vkorc1l1 vitamin K epoxide reductase complex subunit 1L1 ENCODES a protein that exhibits vitamin-K-epoxide reductase (warfarin-sensitive) activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); peptidyl-glutamic acid carboxylation (ortholog); vitamin K metabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 24030087 24078584 - 22301074;30032202 116885145 MODEL JAAIVD010000004;XM_032886335;XM_032886336 XP_032742226;XP_032742227 vitamin K epoxide reductase complex subunit 1 like 1;vitamin K epoxide reductase complex subunit 1-like protein 1 protein-coding 625886283 Pde12 phosphodiesterase 12 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to dsRNA (ortholog); cellular response to interferon-alpha (ortholog); ASSOCIATED WITH Cardiovirus Infections (ortholog); respiratory syncytial virus infectious disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 13 2464531 2470730 - 30032202 116914455 MODEL JAAIVD010000008;XM_032918757 XP_032774648 2',5'-phosphodiesterase 12 protein-coding 625886290 Prkcz protein kinase C zeta ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN activation of phospholipase D activity (ortholog); activation of protein kinase B activity (ortholog); cell migration (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; ceramide signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Hyperalgesia (ortholog); FOUND IN apical cortex (ortholog); apical plasma membrane (ortholog); axon hillock (ortholog) 1 5350189 5461946 + 22301074 116891983 MODEL JAAIVD010000025;XM_032893433 XP_032749324 protein kinase C zeta type protein-coding 625886312 Arfgef3 ARFGEF family member 3 ASSOCIATED WITH dystonia (ortholog); Febrile Seizures (ortholog); Neurodevelopmental Disorders (ortholog) 2 218153126 218308652 + 22301074 116892987 MODEL JAAIVD010000001;XM_032894946 XP_032750837 brefeldin A-inhibited guanine nucleotide-exchange protein 3 protein-coding 625886350 Tmt1a thiol methyltransferase 1A ENCODES a protein that exhibits mRNA m(6)A methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); thiol S-methyltransferase activity (ortholog); INVOLVED IN lncRNA processing (ortholog); odontogenesis (ortholog); osteoblast differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) 1 262748233 262757146 - 22301074 116884051 MODEL JAAIVD010000025;XM_032885300 XP_032741191 Mettl7a methyltransferase like 7A;methyltransferase-like protein 7A protein-coding 625886356 En1 engrailed homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); central nervous system neuron differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); ENDOVE SYNDROME, LIMB-BRAIN TYPE (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN nucleus (ortholog) 10 13196538 13201510 + 22301074;30032202 116911212 MODEL JAAIVD010000005;XM_032915089 XP_032770980 homeobox protein engrailed-1 protein-coding 625886361 Gip gastric inhibitory polypeptide ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); digestive system development (ortholog); ASSOCIATED WITH Anorexia (ortholog); autonomic nervous system disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog) 9 58367309 58375332 - 22301074;30032202 116910072 MODEL JAAIVD010000002;XM_032913887 XP_032769778 protein-coding 625886371 LOC116893233 60S ribosomal protein L35a-like 2 119900257 119901045 + 116893233 MODEL JAAIVD010000001 pseudo 625886372 Timm10b translocase of inner mitochondrial membrane 10B PARTICIPATES IN carrier pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) 2 104477644 104480529 + 30032202 116891822 MODEL JAAIVD010000001;XM_032893186;XM_032893187 XP_032749077;XP_032749078 mitochondrial import inner membrane translocase subunit Tim10 B protein-coding 625886383 Stam signal transducing adaptor molecule ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); INVOLVED IN positive regulation of exosomal secretion (ortholog); regulation of extracellular exosome assembly (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; FOUND IN cytosol (ortholog); ESCRT-0 complex (ortholog) 14 9477867 9524083 - 22301074;30032202 116883272 MODEL JAAIVD010000009;XM_032884261 XP_032740152 signal transducing adapter molecule 1 protein-coding 625886401 LOC116891841 lysosomal Pro-X carboxypeptidase 2 108271813 108320384 - 22301074;30032202 116891841 MODEL JAAIVD010000001;XM_032893208 XP_032749099 protein-coding 625886414 LOC116899434 aldehyde oxidase 1 4 134286580 134343483 - 22301074;30032202 116899434 MODEL JAAIVD010000003;XM_032901188 XP_032757079 protein-coding 625886451 Tmem41a transmembrane protein 41A 4 6618821 6625391 - 116898713 MODEL JAAIVD010000003;XM_032900003 XP_032755894 protein-coding 625886460 LOC116890477 small nucleolar RNA SNORA19 1 201536854 201536979 + 116890477 MODEL JAAIVD010000025;XR_004386666 snorna 625886463 Plekha6 pleckstrin homology domain containing A6 10 2539189 2637439 - 116911139 MODEL JAAIVD010000005;XM_032914991 XP_032770882 pleckstrin homology domain-containing family A member 6 protein-coding 625886494 Msra methionine sulfoxide reductase A ENCODES a protein that exhibits peptide-methionine (S)-S-oxide reductase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); schizophrenia (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 12 59969337 60292275 + 22301074;30032202 116913360 MODEL JAAIVD010000007;XM_032917517;XM_032917518;XM_032917519;XM_032917520;XM_032917521;XR_004389611 XP_032773408;XP_032773409;XP_032773410;XP_032773411;XP_032773412 mitochondrial peptide methionine sulfoxide reductase protein-coding 625886519 Hdac4 histone deacetylase 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); aortic aneurysm (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); chromatin (ortholog) 4 163903978 164152092 - 22301074;30032202 116899644 MODEL JAAIVD010000003;XM_032901646;XM_032901647;XM_032901649;XM_032901650;XM_032901651;XM_032901652;XM_032901653 XP_032757537;XP_032757538;XP_032757540;XP_032757541;XP_032757542;XP_032757543;XP_032757544 protein-coding 625886564 LOC116887955 prohibitin-like X 64546362 64547190 + 116887955 MODEL JAAIVD010000014 pseudo 625886565 Snapin SNAP associated protein ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN acrosomal vesicle (ortholog); BLOC-1 complex (ortholog); BORC complex (ortholog) 3 63128171 63129987 + 22301074;30032202 116896605 MODEL JAAIVD010000012;XM_032897856 XP_032753747 SNARE-associated protein Snapin protein-coding 625886573 LOC116884489 phospholipid phosphatase 2-like 15 22269140 22270404 - 30032202 116884489 MODEL JAAIVD010000010;XM_032885610 XP_032741501 protein-coding 625886578 LOC116904342 oral-facial-digital syndrome 1 protein homolog 6 70980034 70982925 + 116904342 MODEL JAAIVD010000024 pseudo 625886579 Mgarp mitochondria localized glutamic acid rich protein INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axonal transport of mitochondrion (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 3 103060054 103068086 + 30032202 116895493 MODEL JAAIVD010000012;XM_032896750 XP_032752641 protein MGARP protein-coding 625886587 LOC116886772 5S ribosomal RNA 17 43139857 43139975 - 116886772 MODEL JAAIVD010000011;XR_004386169 rrna 625886590 LOC116903081 tubulin alpha-3 chain 6 3360666 3366226 + 22301074;30032202 116903081 MODEL JAAIVD010000024;XM_032905401;XM_032905402 XP_032761292;XP_032761293 protein-coding 625886602 Eef2k eukaryotic elongation factor 2 kinase ENCODES a protein that exhibits calmodulin binding (ortholog); elongation factor-2 kinase activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); lung adenocarcinoma (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 2 80892038 80952600 - 22301074 116891577 MODEL JAAIVD010000001;XM_032892758 XP_032748649 protein-coding 625886624 LOC116887285 H-2 class II histocompatibility antigen, E-U alpha chain ENCODES a protein that exhibits peptide antigen binding (ortholog); polysaccharide binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide or polysaccharide antigen via MHC class II (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); Asthma and Nasal Polyps (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); immunological synapse (ortholog) 18 7045134 7049182 - 22301074;30032202 116887285 MODEL JAAIVD010000013;XM_032888865 XP_032744756 protein-coding 625886632 LOC116894870 U6 spliceosomal RNA 2 38919025 38919129 + 116894870 MODEL JAAIVD010000001;XR_004387083 snrna 625886635 Tp53inp2 tumor protein p53 inducible nuclear protein 2 ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); macroautophagy (ortholog); negative regulation of protein localization (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) 5 134729249 134737123 + 30032202 116902176 MODEL JAAIVD010000023;XM_032904525;XM_032904526;XM_032904527;XM_032904528;XM_032904529 XP_032760416;XP_032760417;XP_032760418;XP_032760419;XP_032760420 tumor protein p53-inducible nuclear protein 2 protein-coding 625886656 Eef1a2 eukaryotic translation elongation factor 1 alpha 2 ENCODES a protein that exhibits protein kinase binding (ortholog); translation elongation factor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of lipid kinase activity (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 38 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); eukaryotic translation elongation factor 1 complex (ortholog) 5 158252991 158262270 - 22301074;30032202 116902430 MODEL JAAIVD010000023;XM_032904965 XP_032760856 elongation factor 1-alpha 2 protein-coding 625886668 LOC116888521 ribonucleoside-diphosphate reductase subunit M2-like X 106265251 106266632 - 22301074;30032202 116888521 MODEL JAAIVD010000014;XM_032889820 XP_032745711 protein-coding 625886673 LOC116905607 cyclin-F-like 7 28386099 28388569 + 116905607 MODEL JAAIVD010000026 pseudo 625886674 Slc37a3 solute carrier family 37 member 3 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); xenobiotic transmembrane transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) 6 100414799 100454849 + 22301074;30032202 116903933 MODEL JAAIVD010000024;XM_032906707;XM_032906708;XM_032906709;XM_032906710;XM_032906711 XP_032762598;XP_032762599;XP_032762600;XP_032762601;XP_032762602 sugar phosphate exchanger 3 protein-coding 625886704 Apoc3 apolipoprotein C3 ENCODES a protein that exhibits high-density lipoprotein particle receptor binding (ortholog); lipase inhibitor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH apolipoprotein C-III deficiency (ortholog); breast cancer (ortholog); cardiovascular system disease (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); intermediate-density lipoprotein particle (ortholog) 8 40753291 40756012 - 22301074;30032202 116906755 MODEL JAAIVD010000027;XM_032909581;XM_032909582;XM_032909583;XM_032909584 XP_032765472;XP_032765473;XP_032765474;XP_032765475 apolipoprotein C-III protein-coding 625886720 LOC116895106 U2 spliceosomal RNA 2 8095419 8095553 - 116895106 MODEL JAAIVD010000001 pseudo 625886721 LOC116899701 protein THEMIS3-like 4 176227928 176265014 - 30032202 116899701 MODEL JAAIVD010000003;XM_032901725 XP_032757616 protein-coding 625886729 LOC116910773 U6 spliceosomal RNA 9 42058476 42058581 + 116910773 MODEL JAAIVD010000002;XR_004389281 snrna 625886732 LOC116884117 U6 spliceosomal RNA 14 62435223 62435328 - 116884117 MODEL JAAIVD010000009;XR_004385848 snrna 625886735 LOC116895425 uncharacterized LOC116895425 3 64390188 64391492 + 116895425 MODEL JAAIVD010000012;XR_004387274 ncrna 625886740 LOC116890958 TD and POZ domain-containing protein 5-like 2 10025771 10028009 + 116890958 MODEL JAAIVD010000001 pseudo 625886741 Tfcp2l1 transcription factor CP2 like 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cytoplasm organization (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) 10 11214499 11267009 + 22301074;30032202 116911350 MODEL JAAIVD010000005;XM_032915270 XP_032771161 transcription factor CP2-like protein 1 protein-coding 625886760 LOC116910368 developmental pluripotency-associated protein 2-like 9 79635751 79636414 + 116910368 MODEL JAAIVD010000002 pseudo 625886761 LOC116915146 small nucleolar RNA SNORD19 13 6716555 6716631 - 116915146 MODEL JAAIVD010000008;XR_004389816 snorna 625886764 Eif4h eukaryotic translation initiation factor 4H INVOLVED IN developmental growth (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog) 16 19423866 19440328 + 22301074 116885282 MODEL JAAIVD010000004;XM_032886527;XM_032886528 XP_032742418;XP_032742419 protein-coding 625886778 LOC116890361 U6 spliceosomal RNA 1 248055613 248055719 + 116890361 MODEL JAAIVD010000025;XR_004386579 snrna 625886781 Rasd2 RASD family member 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN plasma membrane (ortholog) 17 4598669 4609460 + 22301074 116886378 MODEL JAAIVD010000011;XM_032887845 XP_032743736 GTP-binding protein Rhes protein-coding 625886788 Klf5 KLF transcription factor 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to endothelin (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH adenoma (ortholog); Cardiomegaly (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 25189489 25204823 - 30032202 116913416 MODEL JAAIVD010000007;XM_032917601 XP_032773492 Krueppel-like factor 5;Kruppel like factor 5 protein-coding 625886796 Zkscan2 zinc finger with KRAB and SCAN domains 2 2 78367070 78386343 + 30032202 116891543 MODEL JAAIVD010000001;XM_032892700 XP_032748591 zinc finger protein with KRAB and SCAN domains 2 protein-coding 625886807 Sec23a SEC23 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH craniolenticulosutural dysplasia (ortholog); osteoarthritis (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) 7 72264570 72309545 - 22301074;30032202 116905078 MODEL JAAIVD010000026;XM_032907786 XP_032763677 SEC23 homolog A, COPII coat complex component;protein transport protein Sec23A protein-coding 625886831 LOC116914953 ral guanine nucleotide dissociation stimulator-like 13 11856921 11863564 + 116914953 MODEL JAAIVD010000008 pseudo 625886832 Phb1 prohibitin 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3b binding (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antiviral innate immune response (ortholog); B cell activation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 9 58714369 58727259 - 22301074;30032202 116909152 MODEL JAAIVD010000002;XM_032912637 XP_032768528 Phb prohibitin protein-coding 625886843 LOC116909521 olfactory receptor 1493 9 44530074 44531012 + 22301074;30032202 116909521 MODEL JAAIVD010000002;XM_032913129 XP_032769020 protein-coding 625886846 Arhgef33 Rho guanine nucleotide exchange factor 33 7 12678257 12734731 - 22301074 116905850 MODEL JAAIVD010000026;XM_032908824;XM_032908825;XM_032908826;XM_032908827;XM_032908828 XP_032764715;XP_032764716;XP_032764717;XP_032764718;XP_032764719 protein-coding 625886876 Fbxl6 F-box and leucine rich repeat protein 6 1 248871533 248874482 - 22301074;30032202 116913249 MODEL JAAIVD010000025;XM_032917407 XP_032773298 F-box/LRR-repeat protein 6 protein-coding 625886889 LOC116887704 saoe class I histocompatibility antigen, A alpha chain-like 18 9660820 9663007 + 30032202 116887704 MODEL JAAIVD010000013;XM_032889302 XP_032745193 protein-coding 625886896 LOC116888947 forkhead box protein N3-like X 3240298 3245349 - 116888947 MODEL JAAIVD010000014 pseudo 625886897 LOC116900196 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like 5 50161131 50161448 + 22301074;30032202 116900196 MODEL JAAIVD010000023;XM_032901955 XP_032757846 protein-coding 625886900 LOC116900560 glyceraldehyde-3-phosphate dehydrogenase-like 5 90038361 90039418 - 22301074;30032202 116900560 MODEL JAAIVD010000023;XM_032902285 XP_032758176 protein-coding 625886905 Stard7 StAR related lipid transfer domain containing 7 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN establishment of skin barrier (ortholog); inflammatory response (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH familial adult myoclonic epilepsy 2 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 5 106048686 106077688 + 22301074 116901931 MODEL JAAIVD010000023;XM_032904154 XP_032760045 stAR-related lipid transfer protein 7, mitochondrial protein-coding 625886917 Adamts20 ADAM metallopeptidase with thrombospondin type 1 motif 20 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of melanocyte differentiation (ortholog); ASSOCIATED WITH cleft lip (ortholog); melanoma (ortholog); FOUND IN extracellular space (ortholog) 1 267146254 267272968 - 22301074;30032202 116884306 MODEL JAAIVD010000025;XM_032885418 XP_032741309 A disintegrin and metalloproteinase with thrombospondin motifs 20 protein-coding 625886960 Nav3 neuron navigator 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); Neurodevelopmental disorder with poor or absent speech, dysmorphic facies, and behavioral abnormalities (ortholog); FOUND IN microtubule end (ortholog); nuclear envelope (ortholog); nucleus (ortholog) 1 187871442 188400352 - 22301074;30032202 116908829 MODEL JAAIVD010000025;XM_032912252 XP_032768143 protein-coding 625887002 LOC116883287 ubiquitin-40S ribosomal protein S27a-like 14 78242248 78242617 + 116883287 MODEL JAAIVD010000009 pseudo 625887003 Pdpn podoplanin ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); chemokine binding (ortholog); folic acid transmembrane transporter activity (ortholog); INVOLVED IN actin-mediated cell contraction (ortholog); amino acid transport (ortholog); cell adhesion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Albuminuria (ortholog); bacterial pneumonia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) 1 14860905 14893811 + 30032202 116893098 MODEL JAAIVD010000025;XM_032895043;XM_032895047;XM_032895052;XM_032895058 XP_032750934;XP_032750938;XP_032750943;XP_032750949 protein-coding 625887019 LOC116904580 40S ribosomal protein S7-like 6 20907737 20908398 + 22301074;30032202 116904580 MODEL JAAIVD010000024;XM_032907377 XP_032763268 protein-coding 625887024 LOC116903560 probable N-acetyltransferase CML6 6 60386653 60390365 + 30032202 116903560 MODEL JAAIVD010000024;XM_032906177;XM_032906178 XP_032762068;XP_032762069 protein-coding 625887033 LOC116890625 U2 spliceosomal RNA 1 48923028 48923218 - 116890625 MODEL JAAIVD010000025;XR_004386770 snrna 625887036 LOC116895867 RNA exonuclease 1 homolog 3 99768334 99770193 + 22301074;30032202 116895867 MODEL JAAIVD010000012;XM_032896968 XP_032752859 protein-coding 625887039 Fancd2 FA complementation group D2 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); breast cancer (ortholog); Fanconi anemia (ortholog); FOUND IN condensed chromosome (ortholog); cytosol (ortholog); DNA repair complex (ortholog) 6 32940815 33004434 - 30032202 116903405 MODEL JAAIVD010000024;XM_032905918 XP_032761809 Fanconi anemia group D2 protein protein-coding 625887087 Nr1i3 nuclear receptor subfamily 1 group I member 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear receptor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); osteoblast differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 50377952 50383473 + 22301074;30032202 116911184 MODEL JAAIVD010000005;XM_032915052;XM_032915053 XP_032770943;XP_032770944 protein-coding 625887102 LOC116904816 U6 spliceosomal RNA 6 100522157 100522263 + 116904816 MODEL JAAIVD010000024;XR_004388467 snrna 625887105 Ap3b1 adaptor related protein complex 3 subunit beta 1 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); antigen processing and presentation (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); cyclic hematopoiesis (ortholog); genetic disease (ortholog); FOUND IN microvesicle (ortholog) 3 201782994 201982976 - 22301074;30032202 116897285 MODEL JAAIVD010000012;XM_032899017 XP_032754908 AP-3 complex subunit beta-1 protein-coding 625887136 Mon1b MON1 vesicular trafficking associated B INVOLVED IN early viral transcription (ortholog); late viral transcription (ortholog); FOUND IN cytoplasm (ortholog); Mon1-Ccz1 complex (ortholog) 17 33298733 33306551 + 22301074;30032202 116886245 MODEL JAAIVD010000011;XM_032887657 XP_032743548 MON1 homolog B, secretory trafficking associated;vacuolar fusion protein MON1 homolog B protein-coding 625887146 Ostn osteocrin ENCODES a protein that exhibits hormone activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone growth (ortholog); cell surface receptor signaling pathway (ortholog); cGMP biosynthetic process (ortholog); FOUND IN extracellular space (ortholog) 4 12936976 12972636 - 30032202 116897837 MODEL JAAIVD010000003;XM_032899253;XM_032899254 XP_032755144;XP_032755145 protein-coding 625887160 Cfp complement factor properdin INVOLVED IN complement activation, alternative pathway (ortholog); positive regulation of complement activation, alternative pathway (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); factor VIII deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of Golgi membrane (ortholog); extracellular space (ortholog); secretory granule (ortholog) X 2827219 2834867 - 116889401 MODEL JAAIVD010000014;XM_032890508 XP_032746399 properdin protein-coding 625887173 Ube2d4 ubiquitin conjugating enzyme E2 D4 (putative) ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to arsenite(3-) (ortholog); cellular response to cadmium ion (ortholog); protein K11-linked ubiquitination (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; ubiquitin/proteasome degradation pathway 11 74721247 74742412 + 30032202 116912025 MODEL JAAIVD010000006;XM_032915913 XP_032771804 ubiquitin-conjugating enzyme E2 D4 protein-coding 625887181 Ppme1 protein phosphatase methylesterase 1 ENCODES a protein that exhibits lncRNA binding (ortholog); obsolete protein C-terminal methylesterase activity (ortholog); protein kinase binding (ortholog) 2 98619972 98668245 - 22301074;30032202 116891738 MODEL JAAIVD010000001;XM_032893042 XP_032748933 protein-coding 625887199 LOC116892050 zinc finger protein interacting with ribonucleoprotein K 2 143774115 143782403 - 30032202 116892050 MODEL JAAIVD010000001;XM_032893521 XP_032749412 protein-coding 625887206 Dus3l dihydrouridine synthase 3 like ENCODES a protein that exhibits mRNA dihydrouridine synthase activity (ortholog); tRNA-dihydrouridine47 synthase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA dihydrouridine synthesis (ortholog) 4 88136212 88140889 + 22301074;30032202 116899195 MODEL JAAIVD010000003;XM_032900780 XP_032756671 tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like protein-coding 625887223 Dgkk diacylglycerol kinase kappa ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); intracellular signal transduction (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH hypospadias (ortholog); FOUND IN plasma membrane (ortholog) X 79681342 79771535 + 22301074;30032202 116888014 MODEL JAAIVD010000014;XM_032889428 XP_032745319 protein-coding 625887250 LOC116900578 olfactory receptor 4F3/4F16/4F29-like 5 90383473 90384420 - 22301074 116900578 MODEL JAAIVD010000023;XM_032902301 XP_032758192 protein-coding 625887254 Arhgef17 Rho guanine nucleotide exchange factor 17 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog) 2 99175642 99230727 - 22301074;30032202 116891750 MODEL JAAIVD010000001;XM_032893063 XP_032748954 protein-coding 625887278 Atp5f1b ATP synthase F1 subunit beta ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); ATP biosynthetic process (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH acute kidney failure (ortholog); cardiomyopathy (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) 1 155564400 155570599 + 22301074;30032202 116905864 MODEL JAAIVD010000025;XM_032908855 XP_032764746 ATP synthase subunit beta, mitochondrial protein-coding 625887292 Pde11a phosphodiesterase 11A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN negative regulation of cAMP/PKA signal transduction (ortholog); negative regulation of cGMP-mediated signaling (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Bardet-Biedl syndrome 16 (ortholog); primary pigmented nodular adrenocortical disease 2 (ortholog); schizophrenia (ortholog); FOUND IN perikaryon (ortholog) 5 53343509 53566879 - 22301074 116900841 MODEL JAAIVD010000023;XM_032902539 XP_032758430 dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A protein-coding 625887313 Kctd18 potassium channel tetramerization domain containing 18 4 134419634 134432705 + 22301074 116899436 MODEL JAAIVD010000003;XM_032901191;XM_032901192 XP_032757082;XP_032757083 BTB/POZ domain-containing protein KCTD18 protein-coding 625887326 LOC116889429 U6 spliceosomal RNA X 4202614 4202716 - 116889429 MODEL JAAIVD010000014;XR_004386393 snrna 625887329 Malrd1 MAM and LDL receptor class A domain containing 1 INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of bile acid biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 14 7561421 8245540 - 22301074 116883511 MODEL JAAIVD010000009;XM_032884682 XP_032740573 MAM and LDL-receptor class A domain-containing protein 1 protein-coding 625887372 LOC116886752 small nucleolar RNA SNORD111 17 30549613 30549688 - 116886752 MODEL JAAIVD010000011;XR_004386154 snorna 625887375 Mdn1 midasin AAA ATPase 1 INVOLVED IN ribosomal large subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytosol (ortholog); intermediate filament cytoskeleton (ortholog); nucleolus (ortholog) 1 110246875 110370913 - 22301074;30032202 116902371 MODEL JAAIVD010000025;XM_032904871 XP_032760762 midasin protein-coding 625887481 LOC116908059 zinc finger and SCAN domain containing protein 4F-like 1 158380166 158383253 + 30032202 116908059 MODEL JAAIVD010000025;XM_032911366 XP_032767257 protein-coding 625887486 LOC116899709 uncharacterized LOC116899709 4 180221894 180229829 - 116899709 MODEL JAAIVD010000003;XR_004387749 ncrna 625887490 LOC116914883 uncharacterized LOC116914883 13 9326350 9329257 + 116914883 MODEL JAAIVD010000008;XR_004389785 ncrna 625887494 Fgg fibrinogen gamma chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); cell-matrix adhesion (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH blood coagulation disease (ortholog); brain small vessel disease (ortholog); congenital afibrinogenemia (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70510611 70517894 - 22301074;30032202 116895442 MODEL JAAIVD010000012;XM_032896719;XM_032896720;XM_032896721 XP_032752610;XP_032752611;XP_032752612 protein-coding 625887516 LOC116887132 heat shock 70 kDa protein 1A 18 7551360 7553965 - 22301074;30032202 116887132 MODEL JAAIVD010000013;XM_032888679;Z27118 CAA81642;XP_032744570 heat shock rotein 70 protein-coding 625887522 LOC116894161 olfactory receptor 2D3-like 2 105000742 105001672 - 116894161 MODEL JAAIVD010000001 pseudo 625887523 LOC116913919 SIN3-HDAC complex-associated factor-like 12 28801308 28804293 - 116913919 MODEL JAAIVD010000007 pseudo 625887524 Tnfsf15 TNF superfamily member 15 INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); Enteritis (ortholog); Inflammation (ortholog); FOUND IN plasma membrane (ortholog) 1 89842566 89859134 + 22301074 116901235 MODEL JAAIVD010000025;XM_032902984 XP_032758875 tumor necrosis factor ligand superfamily member 15 protein-coding 625887532 LOC116905472 uncharacterized LOC116905472 7 128050124 128054685 - 116905472 MODEL JAAIVD010000026;XR_004388542 ncrna 625887537 Cbl Cbl proto-oncogene ENCODES a protein that exhibits ephrin receptor binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); B-lymphoblastic leukemia/lymphoma with hyperdiploidy (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) 8 38711551 38790998 - 22301074;30032202 116908054 MODEL JAAIVD010000027;XM_032911326;XM_032911327 XP_032767217;XP_032767218 E3 ubiquitin-protein ligase CBL protein-coding 625887558 Dync1h1 dynein cytoplasmic 1 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to nerve growth factor stimulus (ortholog); establishment of spindle localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 7 128163645 128230779 + 22301074;30032202 116905474 MODEL JAAIVD010000026;XM_032908444;XM_032908445 XP_032764335;XP_032764336 cytoplasmic dynein 1 heavy chain 1 protein-coding 625887642 Gast gastrin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Barrett's esophagus (ortholog); Colonic Neoplasms (ortholog) 9 59638156 59640821 + 22301074;30032202 116910069 MODEL JAAIVD010000002;XM_032913882;XM_032913883 XP_032769773;XP_032769774 protein-coding 625887652 LOC116913880 heterogeneous nuclear ribonucleoprotein D-like 12 15606988 15616463 - 116913880 MODEL JAAIVD010000007 pseudo 625887653 Usp30 ubiquitin specific peptidase 30 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); mitochondrial fusion (ortholog); negative regulation of mitophagy (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 16 39845271 39869261 - 22301074;30032202 116885448 MODEL JAAIVD010000004;XM_032886731;XM_032886732 XP_032742622;XP_032742623 ubiquitin carboxyl-terminal hydrolase 30 protein-coding 625887674 LOC116913226 60S ribosomal protein L13-like 1 176499180 176499828 + 116913226 MODEL JAAIVD010000025 pseudo 625887675 Pdpr pyruvate dehydrogenase phosphatase regulatory subunit ASSOCIATED WITH Joubert syndrome (ortholog); FOUND IN mitochondrion (ortholog) 17 30792143 30835849 + 22301074;30032202 116886089 MODEL JAAIVD010000011;XM_032887407;XM_032887408;XM_032887409 XP_032743298;XP_032743299;XP_032743300 pyruvate dehydrogenase phosphatase regulatory subunit, mitochondrial protein-coding 625887705 LOC116895168 alpha-enolase-like 3 67067523 67081880 + 116895168 MODEL JAAIVD010000012 pseudo 625887706 Pdzrn4 PDZ domain containing ring finger 4 ASSOCIATED WITH silicosis (ortholog) 1 265407971 265753222 + 22301074 116884237 MODEL JAAIVD010000025;XM_032885327 XP_032741218 PDZ domain-containing RING finger protein 4 protein-coding 625887719 LOC116894774 cytochrome P450 2C13, male-specific-like 2 224623898 224682936 + 22301074;30032202 116894774 MODEL JAAIVD010000001;XM_032896429 XP_032752320 protein-coding 625887731 LOC116905407 WD repeat-containing protein 60 7 120171454 120193635 + 30032202 116905407 MODEL JAAIVD010000026;XM_032908369;XM_032908370 XP_032764260;XP_032764261 protein-coding 625887751 Fmo2 flavin containing dimethylaniline monoxygenase 2 ENCODES a protein that exhibits monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); NADP+ metabolic process (ortholog); negative regulation of fatty acid oxidation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN membrane (ortholog) 10 42144509 42164163 - 11906197;22301074;30032202 116911123 Q8K4B8 MODEL AF458415;JAAIVD010000005;XM_032914969 AAM46763;XP_032770860 dimethylaniline monooxygenase [N-oxide-forming] 2;flavin-containing monooxygenase 2 protein-coding 625887763 Kctd2 potassium channel tetramerization domain containing 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) 9 68668776 68680294 - 22301074;30032202 116908846 MODEL JAAIVD010000002;XM_032912275 XP_032768166 BTB/POZ domain-containing protein KCTD2 protein-coding 625887773 LOC116900024 60S ribosomal protein L34-like 5 11518542 11518916 - 116900024 MODEL JAAIVD010000023 pseudo 625887774 Blk BLK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); peptidyl-tyrosine phosphorylation (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH diabetes mellitus (ortholog); Kawasaki disease (ortholog); maturity-onset diabetes of the young (ortholog) 12 60999528 61013665 + 22301074;30032202 116913433 MODEL JAAIVD010000007;XM_032917629 XP_032773520 tyrosine-protein kinase Blk protein-coding 625887789 LOC116906349 small nucleolar RNA SNORD113/SNORD114 family 7 127216389 127216460 + 116906349 MODEL JAAIVD010000026;XR_004388628 snorna 625887792 LOC116914160 U2 spliceosomal RNA 12 76198821 76198906 + 116914160 MODEL JAAIVD010000007 pseudo 625887793 LOC116896102 uncharacterized LOC116896102 3 81972316 81985772 + 116896102 MODEL JAAIVD010000012;XR_004387310 ncrna 625887797 Fam219a family with sequence similarity 219 member A 1 3981800 4031993 + 116891339 MODEL JAAIVD010000025;XM_032892288;XM_032892299;XM_032892310;XM_032892321;XM_032892331;XM_032892338 XP_032748179;XP_032748190;XP_032748201;XP_032748212;XP_032748222;XP_032748229 protein FAM219A protein-coding 625887817 LOC116911585 poly(A) RNA polymerase GLD2-like 10 18552272 18555482 + 116911585 MODEL JAAIVD010000005 pseudo 625887818 Adgrd1 adhesion G protein-coupled receptor D1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); regulation of skeletal muscle contraction (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 16 24765083 24876155 - 22301074;30032202 116885595 MODEL JAAIVD010000004;XM_032886900;XM_032886901 XP_032742791;XP_032742792 adhesion G-protein coupled receptor D1 protein-coding 625887848 LOC116912863 whey acidic protein 11 75566720 75568764 - 22301074 116912863 MODEL JAAIVD010000006;XM_032917079 XP_032772970 protein-coding 625887856 LOC116903875 zinc finger protein 398 6 93010971 93040214 - 30032202 116903875 MODEL JAAIVD010000024;XM_032906628 XP_032762519 protein-coding 625887866 LOC116889358 eukaryotic translation initiation factor 3 subunit K-like X 39294133 39294768 + 116889358 MODEL JAAIVD010000014 pseudo 625887867 Kxd1 KxDL motif containing 1 INVOLVED IN lysosome localization (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog) 13 12767521 12780860 - 30032202 116914264 MODEL JAAIVD010000008;XM_032918482;XM_032918483;XM_032918484;XM_032918485 XP_032774373;XP_032774374;XP_032774375;XP_032774376 kxDL motif-containing protein 1 protein-coding 625887886 Pip5k1a phosphatidylinositol-4-phosphate 5-kinase type 1 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); Experimental Neoplasms (ortholog); Lymphatic Metastasis (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) 3 62149717 62191679 + 22301074 116896570 MODEL JAAIVD010000012;XM_032897779;XM_032897781 XP_032753670;XP_032753672 phosphatidylinositol 4-phosphate 5-kinase type-1 alpha protein-coding 625887907 Tgfb2 transforming growth factor beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); aortic aneurysm (ortholog); aortic disease (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell surface (ortholog) 10 64761730 64846738 - 22301074;30032202 116911413 MODEL JAAIVD010000005;XM_032915375;XM_032915376 XP_032771266;XP_032771267 transforming growth factor beta-2 proprotein protein-coding 625887922 LOC116889500 small nucleolar RNA SNORA48 X 35435687 35435828 - 116889500 MODEL JAAIVD010000014;XR_004386447 snorna 625887925 LOC116894094 olfactory receptor 51L1-like 2 103294104 103295060 + 22301074 116894094 MODEL JAAIVD010000001;XM_032895813 XP_032751704 protein-coding 625887928 Prps2 phosphoribosyl pyrophosphate synthetase 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) X 30019547 30055382 + 22301074;30032202 116888705 MODEL JAAIVD010000014;XM_032889995 XP_032745886 ribose-phosphate pyrophosphokinase 2 protein-coding 625887939 LOC116901295 epididymal-specific lipocalin-12 5 11675749 11684613 + 30032202 116901295 MODEL JAAIVD010000023;XM_032903092;XM_032903093 XP_032758983;XP_032758984 complement component C8 gamma chain protein-coding 625887956 Loxl3 lysyl oxidase like 3 ENCODES a protein that exhibits fibronectin binding (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); epithelial to mesenchymal transition (ortholog); fibronectin fibril organization (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); Myopia 28 (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 6 63173667 63190102 - 22301074;30032202 116903631 MODEL JAAIVD010000024;XM_032906290;XM_032906291;XM_032906292 XP_032762181;XP_032762182;XP_032762183 lysyl oxidase homolog 3 protein-coding 625887982 LOC116885254 transmembrane protein 132D-like 16 25688410 25824569 + 116885254 MODEL JAAIVD010000004;XM_032886492 XP_032742383 protein-coding 625887987 LOC116902965 L-lactate dehydrogenase A chain-like 6 125829175 125830182 - 116902965 MODEL JAAIVD010000024 pseudo 625887988 LOC116898442 60S ribosomal protein L36a-like 4 95157460 95170318 - 116898442 MODEL JAAIVD010000003 pseudo 625887989 LOC116903355 uncharacterized LOC116903355 6 28794100 28795027 + 116903355 MODEL JAAIVD010000024;XR_004388273 ncrna 625887995 LOC116910694 small nucleolar RNA SNORA51 9 72861209 72861334 - 116910694 MODEL JAAIVD010000002 pseudo 625887996 Dhrs1 dehydrogenase/reductase 1 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 69256369 69263782 + 116913547 MODEL JAAIVD010000007;XM_032917752;XM_032917753;XM_032917754 XP_032773643;XP_032773644;XP_032773645 dehydrogenase/reductase SDR family member 1 protein-coding 625888017 Ccdc126 coiled-coil domain containing 126 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 6 91649832 91657207 - 116903833 MODEL JAAIVD010000024;XM_032906545 XP_032762436 coiled-coil domain-containing protein 126 protein-coding 625888023 LOC116912602 sulfotransferase family cytosolic 1B member 1 11 1389774 1405600 + 22301074;30032202 116912602 MODEL JAAIVD010000006;XM_032916725 XP_032772616 protein-coding 625888034 LOC116913028 U2 spliceosomal RNA 11 8098455 8098622 + 116913028 MODEL JAAIVD010000006 pseudo 625888035 LOC116889681 ATP-dependent zinc metalloprotease FtsH-like 22301074;30032202 116889681 MODEL JAAIVD010000051;XM_032890570 XP_032746461 protein-coding 625888036 LOC116894189 olfactory receptor 10T2-like 2 106088582 106089565 + 22301074 116894189 MODEL JAAIVD010000001;XM_032895904 XP_032751795 protein-coding 625888039 Mnd1 meiotic nuclear divisions 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); reciprocal meiotic recombination (ortholog) 3 69439207 69499892 + 30032202 116896740 MODEL JAAIVD010000012;XM_032898173 XP_032754064 meiotic nuclear division protein 1 homolog protein-coding 625888052 LOC116887300 olfactory receptor 2B11-like 18 11039702 11040640 + 22301074 116887300 MODEL JAAIVD010000013;XM_032888882 XP_032744773 protein-coding 625888055 LOC116887207 cell division cycle-associated protein 3-like 18 43268200 43269067 - 116887207 MODEL JAAIVD010000013 pseudo 625888056 LOC116903383 uncharacterized LOC116903383 1 138169369 138175852 - 22301074 116903383 MODEL JAAIVD010000025;XM_032905919 XP_032761810 uncharacterized protein LOC116903383 protein-coding 625888060 LOC116909786 40S ribosomal protein S2-like 9 858694 859749 - 116909786 MODEL JAAIVD010000002 pseudo 625888061 LOC116900794 uncharacterized LOC116900794 5 157467818 157471049 - 116900794 MODEL JAAIVD010000023;XR_004387953 ncrna 625888066 LOC116899919 U1 spliceosomal RNA 4 90162984 90163135 + 116899919 MODEL JAAIVD010000003 pseudo 625888067 Ube2g2 ubiquitin conjugating enzyme E2 G2 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) 18 965751 988026 + 30032202 116887130 MODEL JAAIVD010000013;XM_032888678 XP_032744569 ubiquitin-conjugating enzyme E2 G2 protein-coding 625888077 LOC116887198 mitochondrial import receptor subunit TOM7 homolog 1 38164468 38164629 + 116887198 MODEL JAAIVD010000025;XM_032888758 XP_032744649 protein-coding 625888080 LOC116883247 kinesin-like protein KIF11 14 67963987 67966414 - 116883247 MODEL JAAIVD010000009 pseudo 625888081 Prdm12 PR/SET domain 12 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Congenital Pain Insensitivity (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy type 8 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 3969733 3984007 - 30032202 116900050 MODEL JAAIVD010000023;XM_032901844 XP_032757735 PR domain zinc finger protein 12 protein-coding 625888088 LOC116902990 ferritin light chain 1-like 1 132661492 132663542 - 116902990 MODEL JAAIVD010000025 pseudo 625888089 Gadd45g growth arrest and DNA damage inducible gamma ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH mesangial proliferative glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 70216781 70218635 + 30032202 116883838 MODEL JAAIVD010000009;XM_032885100 XP_032740991 growth arrest and DNA damage-inducible protein GADD45 gamma protein-coding 625888097 LOC116912202 UDP-glucuronosyltransferase 2B2-like 11 1533503 1551374 + 116912202 MODEL JAAIVD010000006 pseudo 625888098 LOC116897353 60S ribosomal protein L24-like 3 220263104 220263607 + 116897353 MODEL JAAIVD010000012 pseudo 625888099 LOC116895952 inosine-5'-monophosphate dehydrogenase 1-like 3 138480971 138486129 + 116895952 MODEL JAAIVD010000012 pseudo 625888100 LOC116904396 anionic trypsin-2-like 6 98595529 98598070 + 116904396 MODEL JAAIVD010000024 pseudo 625888101 Trim44 tripartite motif containing 44 INVOLVED IN negative regulation of protein K48-linked ubiquitination (ortholog); positive regulation of cytokine-mediated signaling pathway (ortholog); positive regulation of defense response to virus by host (ortholog); ASSOCIATED WITH aniridia (ortholog); Aniridia 3 (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog) 5 80128735 80240136 - 22301074 116901675 MODEL JAAIVD010000023;XM_032903790 XP_032759681 tripartite motif-containing protein 44 protein-coding 625888110 Alox12 arachidonate 12-lipoxygenase, 12S type ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 15-lipoxygenase activity (ortholog); linoleate 13S-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cellular response to lipid (ortholog); establishment of skin barrier (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Albuminuria (ortholog); autism spectrum disorder (ortholog); Bone Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 9 49844164 49856477 - 22301074;30032202 116910124 MODEL JAAIVD010000002;XM_032913958 XP_032769849 arachidonate 12-lipoxygenase, 12S-type protein-coding 625888128 LOC116910716 small nucleolar RNA SNORA17 9 96340277 96340409 - 116910716 MODEL JAAIVD010000002;XR_004389243 snorna 625888131 Elk4 ETS transcription factor ELK4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 3811450 3836158 - 22301074;30032202 116911742 MODEL JAAIVD010000005;XM_032915723;XM_032915724;XM_032915725;XM_032915726;XM_032915727;XR_004389336 XP_032771614;XP_032771615;XP_032771616;XP_032771617;XP_032771618 ETS domain-containing protein Elk-4 protein-coding 625888154 Slc25a24 solute carrier family 25 member 24 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); cellular response to calcium ion (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH dementia (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 3 49131671 49158659 - 22301074;30032202 116896349 MODEL JAAIVD010000012;XM_032897451 XP_032753342 calcium-binding mitochondrial carrier protein SCaMC-1 protein-coding 625888166 Dhx37 DEAH-box helicase 37 ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of male gonad development (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Anorchia (ortholog); coloboma of optic nerve (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) 16 28478041 28497249 + 22301074;30032202 116885603 MODEL JAAIVD010000004;XM_032886905 XP_032742796 probable ATP-dependent RNA helicase DHX37 protein-coding 625888197 Ctu1 cytosolic thiouridylase subunit 1 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog) 2 155721886 155726825 - 22301074;30032202 116893336 MODEL JAAIVD010000001;XM_032895150 XP_032751041 cytoplasmic tRNA 2-thiolation protein 1 protein-coding 625888203 Slc9b1 solute carrier family 9 member B1 INVOLVED IN flagellated sperm motility (ortholog); regulation of intracellular pH (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN sperm principal piece (ortholog) 3 23694162 23742217 - 22301074 116896223 MODEL JAAIVD010000012;XM_032897278 XP_032753169 sodium/hydrogen exchanger 9B1 protein-coding 625888220 LOC116911800 small nucleolar RNA SNORD79 10 40326784 40326868 + 116911800 MODEL JAAIVD010000005;XR_004389342 snorna 625888223 LOC116887104 keratin-associated protein 10-11-like 18 1126961 1127837 + 116887104 MODEL JAAIVD010000013 pseudo 625888224 LOC116889087 40S ribosomal protein S14-like X 15420811 15421316 - 116889087 MODEL JAAIVD010000014 pseudo 625888225 Ubxn4 UBX domain protein 4 INVOLVED IN ERAD pathway (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 10 7438840 7469823 - 22301074 116911022 MODEL JAAIVD010000005;XM_032914756;XM_032914757 XP_032770647;XP_032770648 UBX domain-containing protein 4 protein-coding 625888246 Eif6 eukaryotic translation initiation factor 6 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Breast Neoplasms (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); lamin filament (ortholog) 5 135173828 135180573 - 22301074;30032202 116902186 MODEL JAAIVD010000023;XM_032904552 XP_032760443 protein-coding 625888256 Coro1a coronin 1A ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); coronin-1A deficiency (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) 2 75199819 75204837 + 30032202 116891512 MODEL JAAIVD010000001;XM_032892648;XM_032892649 XP_032748539;XP_032748540 coronin-1A protein-coding 625888274 Cpne4 copine 4 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 8 95883314 96335846 + 30032202 116907437 MODEL JAAIVD010000027;XM_032910406 XP_032766297 copine-4 protein-coding 625888294 LOC116911985 glyceraldehyde-3-phosphate dehydrogenase-like 1 167331303 167344527 - 116911985 MODEL JAAIVD010000025 pseudo 625888295 Eif4e eukaryotic translation initiation factor 4E ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); eukaryotic initiation factor 4G binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to dexamethasone stimulus (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN CRM1 export pathway; mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); mantle cell lymphoma (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 3 20593495 20624470 - 22301074;30032202 116896206 MODEL JAAIVD010000012;XM_032897254 XP_032753145 protein-coding 625888306 Grhl2 grainyhead like transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anterior neural tube closure (ortholog); bicellular tight junction assembly (ortholog); brain development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 28 (ortholog); corneal dystrophy (ortholog); ECTODERMAL DYSPLASIA/SHORT STATURE SYNDROME (ortholog); FOUND IN cell-cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 210734885 210857307 + 30032202 116910633 MODEL JAAIVD010000025;XM_032914581 XP_032770472 grainyhead-like protein 2 homolog protein-coding 625888326 Fhod1 formin homology 2 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); nuclear migration (ortholog); positive regulation of stress fiber assembly (ortholog); FOUND IN cytosol (ortholog); intercalated disc (ortholog); nucleoplasm (ortholog) 17 25055361 25074025 - 30032202 116886347 MODEL JAAIVD010000011;XM_032887798 XP_032743689 FH1/FH2 domain-containing protein 1 protein-coding 625888352 LOC116895766 pancreatic alpha-amylase-like 3 46569187 46601419 + 116895766 MODEL JAAIVD010000012;XM_032896924 XP_032752815 protein-coding 625888360 Lactbl1 lactamase beta like 1 1 21592087 21605154 - 116890281 MODEL JAAIVD010000025;XM_032890994 XP_032746885 putative beta-lactamase-like 1 protein-coding 625888369 LOC116914155 uncharacterized LOC116914155 1 251729743 251735300 + 116914155 MODEL JAAIVD010000025;XR_004389709;XR_004389710 ncrna 625888376 Sec14l5 SEC14 like lipid binding 5 9 16722650 16762857 - 30032202 116909235 MODEL JAAIVD010000002;XM_032912736 XP_032768627 SEC14-like protein 5 protein-coding 625888396 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 59627844 59627915 - 116897680 MODEL JAAIVD010000012 trna 625888397 LOC116887660 cadherin-23-like 18 26145375 26147665 - 22301074;30032202 116887660 MODEL JAAIVD010000013;XM_032889259 XP_032745150 protein-coding 625888402 LOC116889268 cell division cycle-associated 7-like protein X 87182316 87183632 + 116889268 MODEL JAAIVD010000014 pseudo 625888403 LOC116910227 E3 ubiquitin/ISG15 ligase TRIM25-like 9 68646462 68654559 - 22301074 116910227 MODEL JAAIVD010000002;XM_032914118 XP_032770009 protein-coding 625888413 LOC116904391 hsc70-interacting protein-like 6 95796818 95797600 - 116904391 MODEL JAAIVD010000024 pseudo 625888414 LOC116891961 heat shock cognate 71 kDa protein-like 2 124572001 124574083 - 116891961 MODEL JAAIVD010000001;XR_004386878 pseudo 625888417 Herpud1 homocysteine inducible ER protein with ubiquitin like domain 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) 17 1295025 1305453 + 30032202 116886278 MODEL JAAIVD010000011;XM_032887699;XM_032887700;XM_032887701 XP_032743590;XP_032743591;XP_032743592 homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein protein-coding 625888437 Rpl11 ribosomal protein L11 ENCODES a protein that exhibits 5S rRNA binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 1 22183636 22187228 + 1599472;22301074;30032202 116894444 MODEL JAAIVD010000025;X62146;XM_032896150 CAA44072;XP_032752041 60S ribosomal protein L11 protein-coding 625888447 LOC116905059 glyceraldehyde-3-phosphate dehydrogenase-like 7 69439197 69440180 + 22301074;30032202 116905059 MODEL JAAIVD010000026;XM_032907752 XP_032763643 protein-coding 625888451 LOC116894114 putative olfactory receptor 56B2 2 103660095 103661054 + 22301074 116894114 MODEL JAAIVD010000001;XM_032895832 XP_032751723 protein-coding 625888454 Helz2 helicase with zinc finger 2 ENCODES a protein that exhibits exoribonuclease II activity (ortholog); RNA helicase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) 5 158324633 158339224 - 22301074;30032202 116902433 MODEL JAAIVD010000023;XM_032904969 XP_032760860 helicase with zinc finger domain 2 protein-coding 625888477 Hal histidine ammonia-lyase ENCODES a protein that exhibits histidine ammonia-lyase activity (ortholog); INVOLVED IN L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); histidinemia (ortholog) 1 172539406 172570014 + 22301074;30032202 116889980 MODEL JAAIVD010000025;XM_032890773 XP_032746664 protein-coding 625888501 Rwdd1 RWD domain containing 1 INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to oxidative stress (ortholog); cellular response to testosterone stimulus (ortholog); FOUND IN cytoplasm (ortholog) 18 24335538 24352772 + 22301074;30032202 116886900 MODEL JAAIVD010000013;XM_032888366;XM_032888367 XP_032744257;XP_032744258 RWD domain-containing protein 1 protein-coding 625888517 Tcf7 transcription factor 7 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); canonical Wnt signaling pathway (ortholog); canonical Wnt signaling pathway involved in negative regulation of apoptotic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Crohn's disease (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN euchromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 34748775 34779099 - 30032202 116909898 MODEL JAAIVD010000002;XM_032913649;XM_032913650 XP_032769540;XP_032769541 protein-coding 625888535 Tdrd5 tudor domain containing 5 INVOLVED IN P granule organization (ortholog); spermatid development (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); FOUND IN chromatoid body (ortholog); pi-body (ortholog); synapse (ortholog) 10 35626581 35675057 - 22301074;30032202 116911169 MODEL JAAIVD010000005;XM_032915031 XP_032770922 tudor domain-containing protein 5 protein-coding 625888557 Dis3l DIS3 like exosome 3'-5' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); enzyme binding (ortholog); exoribonuclease II activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasmic exosome (RNase complex) (ortholog) 8 58605086 58642699 - 22301074;30032202 116907006 MODEL JAAIVD010000027;XM_032909933;XM_032909934 XP_032765824;XP_032765825 DIS3-like exonuclease 1 protein-coding 625888580 LOC116895671 ubiquitin-conjugating enzyme E2 variant 1-like 3 196714112 196715010 + 30032202 116895671 MODEL JAAIVD010000012;XM_032896875 XP_032752766 protein-coding 625888585 LOC116897086 baculoviral IAP repeat-containing protein 1b-like 3 157697575 157712462 + 30032202 116897086 MODEL JAAIVD010000012;XM_032898719;XM_032898720;XM_032898721;XM_032898722;XM_032898723 XP_032754610;XP_032754611;XP_032754612;XP_032754613;XP_032754614 protein-coding 625888607 LOC116911270 glyceraldehyde-3-phosphate dehydrogenase-like 10 5286831 5287840 - 116911270 MODEL JAAIVD010000005 pseudo 625888608 LOC116908936 keratin-associated protein 9-1-like 9 54676947 54677882 + 22301074 116908936 MODEL JAAIVD010000002;XM_032912394 XP_032768285 protein-coding 625888613 Znf524 zinc finger protein 524 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 177591468 177594916 + 30032202 116892681 MODEL JAAIVD010000001;XM_032894522 XP_032750413 protein-coding 625888619 LOC116909907 60S ribosomal protein L7a-like 9 10991095 10991644 - 116909907 MODEL JAAIVD010000002 pseudo 625888620 LOC116899925 U1 spliceosomal RNA 4 170617683 170617846 + 116899925 MODEL JAAIVD010000003;XR_004387895 snrna 625888623 Ttll8 tubulin tyrosine ligase like 8 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) 1 258230296 258272513 - 30032202 116914872 MODEL JAAIVD010000025;XM_032919319 XP_032775210 protein monoglycylase TTLL8 protein-coding 625888638 Tbpl1 TATA-box binding protein like 1 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN acrosome assembly (ortholog); dTTP biosynthetic process (ortholog); spermatid nucleus differentiation (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) 2 208731985 208757813 - 22301074;30032202 116892938 MODEL JAAIVD010000001;XM_032894880;XM_032894881;XM_032894882 XP_032750771;XP_032750772;XP_032750773 TATA box-binding protein-like protein 1 protein-coding 625888655 LOC116888106 fatty acyl-CoA reductase 1-like X 99259395 99260927 - 116888106 MODEL JAAIVD010000014 pseudo 625888656 Psmb5 proteasome 20S subunit beta 5 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); proteolysis (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 12 70382226 70387127 + 22301074 116913735 MODEL D45247;JAAIVD010000007;XM_032918039 BAA08204;XP_032773930 proteasome subunit beta type-5 protein-coding 625888663 LOC116888919 chromodomain Y-like protein X 56632214 56633101 - 30032202 116888919 MODEL JAAIVD010000014;XM_032890167 XP_032746058 protein-coding 625888666 Atp10d ATPase phospholipid transporting 10D (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog); phospholipid-translocating ATPase complex (ortholog) 11 29052257 29114439 + 22301074;30032202 116912554 MODEL JAAIVD010000006;XM_032916654 XP_032772545 probable phospholipid-transporting ATPase VD protein-coding 625888692 Zbtb5 zinc finger and BTB domain containing 5 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 1 1500973 1521212 + 22301074;30032202 116890836 MODEL JAAIVD010000025;XM_032891365;XM_032891372;XM_032891383 XP_032747256;XP_032747263;XP_032747274 zinc finger and BTB domain-containing protein 5 protein-coding 625888706 Gpr153 G protein-coupled receptor 153 ASSOCIATED WITH Childhood Schizophrenia (ortholog); schizophrenia (ortholog) 1 8458190 8464395 - 22301074;30032202 116892280 MODEL JAAIVD010000025;XM_032893876;XM_032893885;XM_032893894 XP_032749767;XP_032749776;XP_032749785 probable G-protein coupled receptor 153 protein-coding 625888723 LOC116897912 ribosome biogenesis protein NSA2 homolog 4 37601183 37602126 + 116897912 MODEL JAAIVD010000003 pseudo 625888724 Wdr62 WD repeat domain 62 INVOLVED IN centriole replication (ortholog); cerebral cortex development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytosol (ortholog) 2 165729950 165768904 + 22301074;30032202 116892328 MODEL JAAIVD010000001;XM_032893954;XM_032893955;XM_032893956 XP_032749845;XP_032749846;XP_032749847 WD repeat-containing protein 62 protein-coding 625888764 LOC116901719 uncharacterized LOC116901719 1 94808632 94822424 - 116901719 MODEL JAAIVD010000025;XR_004388012 ncrna 625888768 LOC116895574 phosphoglycerate kinase 1-like 3 135492723 135493963 - 116895574 MODEL JAAIVD010000012 pseudo 625888769 LOC116895218 40S ribosomal protein S12-like 3 14342782 14346371 + 116895218 MODEL JAAIVD010000012 pseudo 625888770 Dtwd2 DTW motif tRNA-uridine aminocarboxypropyltransferase 2 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN glycoRNA biosynthetic process (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 36920597 36983360 + 116884718 MODEL JAAIVD010000010;XM_032885904 XP_032741795 DTW domain containing 2;DTW domain-containing protein 2 protein-coding 625888780 LOC116904867 60S ribosomal protein L13-like 7 44881016 44881629 - 22301074;30032202 116904867 MODEL JAAIVD010000026;XM_032907459 XP_032763350 protein-coding 625888785 Klk5 kallikrein related peptidase 5 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of antibacterial peptide production (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN epidermal lamellar body (ortholog); extracellular space (ortholog) 2 155541839 155550411 - 22301074;30032202 116894356 MODEL JAAIVD010000001;XM_032896058 XP_032751949 kallikrein-5 protein-coding 625888792 Gpm6b glycoprotein M6B INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of serotonin uptake (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) X 30366089 30511924 + 30032202 116888313 MODEL JAAIVD010000014;XM_032889583;XM_032889584;XM_032889585;XM_032889586;XM_032889587 XP_032745474;XP_032745475;XP_032745476;XP_032745477;XP_032745478 neuronal membrane glycoprotein M6-b protein-coding 625888818 Pias3 protein inhibitor of activated STAT 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); NF-kappaB binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); negative regulation of osteoclast differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; sumoylation pathway; ASSOCIATED WITH Uterine Cervical Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 3 60599645 60607731 - 22301074;30032202 116896501 MODEL JAAIVD010000012;XM_032897675;XM_032897676 XP_032753566;XP_032753567 E3 SUMO-protein ligase PIAS3 protein-coding 625888839 LOC116888269 AF4/FMR2 family member 2-like X 127580315 127753885 + 30032202 116888269 MODEL JAAIVD010000014;XM_032889545;XM_032889546 XP_032745436;XP_032745437 protein-coding 625888851 LOC116914693 actin, alpha skeletal muscle-like 13 24051352 24051763 + 116914693 MODEL JAAIVD010000008 pseudo 625888852 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 50815957 50816028 + 116914215 MODEL JAAIVD010000007 trna 625888853 Pknox1 PBX/knotted 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); camera-type eye development (ortholog); erythrocyte differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 18 2255218 2296755 - 30032202 116887022 MODEL JAAIVD010000013;XM_032888511;XM_032888512;XM_032888513;XM_032888514;XM_032888515;XM_032888516 XP_032744402;XP_032744403;XP_032744404;XP_032744405;XP_032744406;XP_032744407 homeobox protein PKNOX1 protein-coding 625888880 Cd320 CD320 molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cargo receptor activity (ortholog); cobalamin binding (ortholog); INVOLVED IN B cell costimulation (ortholog); cobalamin transport (ortholog); positive regulation of B cell proliferation (ortholog); ASSOCIATED WITH methylmalonic acidemia due to transcobalamin receptor defect (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 1 158568912 158574590 - 22301074;30032202 116906987 MODEL JAAIVD010000025;XM_032909917;XM_032909925 XP_032765808;XP_032765816 CD320 antigen protein-coding 625888893 Coq10a coenzyme Q10A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 1 155833407 155839303 - 22301074;30032202 116906001 MODEL JAAIVD010000025;XM_032909044;XM_032909050;XM_032909058 XP_032764935;XP_032764941;XP_032764949 coenzyme Q-binding protein COQ10 homolog A, mitochondrial protein-coding 625888909 Ypel2 yippee like 2 9 83824152 83856359 + 116908935 MODEL JAAIVD010000002;XM_032912392 XP_032768283 protein yippee-like 2 protein-coding 625888917 LOC116889607 ferritin light chain 1-like 1 142113444 142114192 + 116889607 MODEL JAAIVD010000025;XR_004386503 pseudo 625888920 LOC116895224 guanylate-binding protein 4-like 3 18089626 18098490 + 22301074;30032202 116895224 MODEL JAAIVD010000012;XM_032896552 XP_032752443 protein-coding 625888929 Adamts10 ADAM metallopeptidase with thrombospondin type 1 motif 10 ASSOCIATED WITH genetic disease (ortholog); optic nerve disease (ortholog); primary open angle glaucoma (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) 1 158836733 158866743 - 22301074;30032202 116907042 MODEL JAAIVD010000025;XM_032910011;XR_004388796;XR_004388797;XR_004388798;XR_004388799 XP_032765902 A disintegrin and metalloproteinase with thrombospondin motifs 10 protein-coding 625888969 Setbp1 SET binding protein 1 ASSOCIATED WITH atrial heart septal defect (ortholog); atypical chronic myeloid leukemia, BCR-ABL1 negative (ortholog); autosomal dominant intellectual developmental disorder 29 (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 15 53061545 53427392 + 22301074 116884787 MODEL JAAIVD010000010;XM_032886020 XP_032741911 SET-binding protein protein-coding 625888979 Slc35h1 solute carrier family 35 member H1 INVOLVED IN negative regulation of gene expression (ortholog); positive regulation of Notch signaling pathway (ortholog); protein O-linked glycosylation via fucose (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 5 152677114 152684401 + 30032202 116902336 MODEL JAAIVD010000023;XM_032904811;XM_032904812 XP_032760702;XP_032760703 Slc35c2 solute carrier family 35 member C2 protein-coding 625888996 LOC116886258 AP-3 complex subunit sigma-1-like 17 21976853 21977636 - 22301074;30032202 116886258 MODEL JAAIVD010000011;XM_032887678 XP_032743569 protein-coding 625889002 Treh trehalase ENCODES a protein that exhibits alpha,alpha-trehalase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); trehalose catabolic process (ortholog); PARTICIPATES IN trehalose degradation pathway; ASSOCIATED WITH Trehalase Deficiency (ortholog) 8 39207214 39220052 + 22301074;30032202 116908297 MODEL JAAIVD010000027;XM_032911575;XM_032911577 XP_032767466;XP_032767468 protein-coding 625889025 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 153923965 153924036 + 116902680 MODEL JAAIVD010000023 trna 625889026 Riok1 RIO kinase 1 INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); methyltransferase complex (ortholog); preribosome, small subunit precursor (ortholog) 14 57078962 57101266 + 22301074;30032202 116883545 MODEL JAAIVD010000009;XM_032884715 XP_032740606 serine/threonine-protein kinase RIO1 protein-coding 625889047 Ptch2 patched 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); smoothened binding (ortholog); INVOLVED IN cell fate determination (ortholog); epidermal cell fate specification (ortholog); epidermis development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog) 1 40720334 40739409 + 22301074;30032202 116898639 MODEL JAAIVD010000025;XM_032899865 XP_032755756 protein patched homolog 2 protein-coding 625889073 Brwd3 bromodomain and WD repeat domain containing 3 INVOLVED IN cytoskeleton organization (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog) X 62921656 63014032 - 22301074;30032202 116887804 MODEL JAAIVD010000014;XM_032889330 XP_032745221 bromodomain and WD repeat-containing protein 3 protein-coding 625889118 LOC116893535 geranylgeranyl transferase type-2 subunit beta-like 2 200961740 200962528 + 116893535 MODEL JAAIVD010000001 pseudo 625889119 A3galt2 alpha 1,3-galactosyltransferase 2 ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetyllactosaminide 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN cellular response to manganese ion (ortholog); glycosphingolipid biosynthetic process (ortholog); obsolete lipid glycosylation (ortholog); FOUND IN Golgi apparatus (ortholog); vesicle (ortholog) 1 29369079 29381326 - 22301074;30032202 116896398 MODEL JAAIVD010000025;XM_032897539 XP_032753430 alpha-1,3-galactosyltransferase 2 protein-coding 625889128 Mob2 MOB kinase activator 2 INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection terminus (ortholog) 2 7457783 7514479 + 30032202 116890851 MODEL JAAIVD010000001;XM_032891393;XM_032891394;XM_032891396;XM_032891397;XM_032891398;XM_032891399;XM_032891400 XP_032747284;XP_032747285;XP_032747287;XP_032747288;XP_032747289;XP_032747290;XP_032747291 protein-coding 625889158 Trim58 tripartite motif containing 58 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); dynein intermediate chain binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of erythrocyte enucleation (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog) 9 39390028 39400859 - 22301074 116910035 MODEL JAAIVD010000002;XM_032913820 XP_032769711 E3 ubiquitin-protein ligase TRIM58 protein-coding 625889166 Hsd11b2 hydroxysteroid 11-beta dehydrogenase 2 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); NAD binding (ortholog); steroid binding (ortholog); INVOLVED IN cortisol metabolic process (ortholog); female pregnancy (ortholog); glucocorticoid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH apparent mineralocorticoid excess syndrome (ortholog); asthma (ortholog); fetal alcohol spectrum disorder (ortholog) 17 25246753 25252022 + 22301074 116886663 MODEL JAAIVD010000011;XM_032888153;XM_032888154 XP_032744044;XP_032744045 corticosteroid 11-beta-dehydrogenase isozyme 2 protein-coding 625889178 Sh3d19 SH3 domain containing 19 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); positive regulation of membrane protein ectodomain proteolysis (ortholog); regulation of cell morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 67430449 67593831 - 22301074 116896727 MODEL JAAIVD010000012;XM_032898150 XP_032754041 SH3 domain-containing protein 19 protein-coding 625889203 LOC116895014 small nucleolar RNA SNORA48 2 224214543 224214686 - 116895014 MODEL JAAIVD010000001;XR_004387201 snorna 625889206 Nhlh2 nescient helix-loop-helix 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration in hindbrain (ortholog); hypothalamus gonadotrophin-releasing hormone neuron development (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism (ortholog); Hypogonadotropic Hypogonadism 27 without Anosmia (ortholog); Klinefelter syndrome (ortholog); FOUND IN chromatin (ortholog) 3 56056382 56060925 - 22301074;30032202 116895383 MODEL JAAIVD010000012;XM_032896675;XM_032896676 XP_032752566;XP_032752567 helix-loop-helix protein 2 protein-coding 625889216 Lrp11 LDL receptor related protein 11 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN multicellular organismal response to stress (ortholog); response to cold (ortholog); response to heat (ortholog) 2 229415966 229445631 - 22301074 116893043 MODEL JAAIVD010000001;XM_032895012 XP_032750903 low-density lipoprotein receptor-related protein 11 protein-coding 625889227 LOC116893187 olfactory receptor 52N5-like 2 103890635 103891606 + 22301074 116893187 MODEL JAAIVD010000001;XM_032895090 XP_032750981 protein-coding 625889230 Fkbpl FKBP prolyl isomerase like INVOLVED IN regulation of angiogenesis (ortholog); regulation of blood vessel branching (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN extracellular region (ortholog) 18 7324164 7325690 + 22301074 116886834 MODEL JAAIVD010000013;XM_032888282 XP_032744173 FK506-binding protein-like protein-coding 625889236 LOC116888757 olfactory receptor 13F1-like 1 102203548 102204507 - 22301074 116888757 MODEL JAAIVD010000025;XM_032890053 XP_032745944 protein-coding 625889239 LOC116885856 WD repeat-containing protein on Y chromosome-like 16 4246483 4296564 - 22301074 116885856 MODEL JAAIVD010000004;XM_032887189 XP_032743080 protein-coding 625889261 Rps21 ribosomal protein S21 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 5 157335273 157336367 + 22301074;30032202 116902407 MODEL JAAIVD010000023;XM_032904936 XP_032760827 40S ribosomal protein S21 protein-coding 625889271 LOC116911690 torsin-1A-interacting protein 2-like 10 35472072 35486699 + 22301074;30032202 116911690 MODEL JAAIVD010000005;XM_032915647 XP_032771538 protein-coding 625889280 Sidt1 SID1 transmembrane family member 1 ENCODES a protein that exhibits cholesterol binding (ortholog); double-stranded RNA binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog) 4 29125058 29214927 - 22301074;30032202 116898862 MODEL JAAIVD010000003;XM_032900229;XM_032900230 XP_032756120;XP_032756121 protein-coding 625889311 LOC116884714 polyadenylate-binding protein 1-like 15 5152586 5154846 - 30032202 116884714 MODEL JAAIVD010000010;XM_032885900 XP_032741791 protein-coding 625889315 Gdpd2 glycerophosphodiester phosphodiesterase domain containing 2 INVOLVED IN actin filament organization (ortholog); positive regulation of osteoblast differentiation (ortholog); FOUND IN actin filament (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) X 58729135 58737772 - 22301074;30032202 116889084 MODEL JAAIVD010000014;XM_032890260 XP_032746151 glycerophosphoinositol inositolphosphodiesterase GDPD2 protein-coding 625889335 Usp42 ubiquitin specific peptidase 42 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog) 16 9389382 9408350 + 22301074;30032202 116885581 MODEL JAAIVD010000004;XM_032886877 XP_032742768 ubiquitin carboxyl-terminal hydrolase 42 protein-coding 625889355 LOC116900087 eukaryotic translation initiation factor 4E-like 5 11329454 11330112 - 116900087 MODEL JAAIVD010000023 pseudo 625889356 KEG97_t19 tRNA-Leu MT 11656 11726 + 64988247 trna 625889357 LOC116887643 single-stranded DNA-binding protein, mitochondrial-like 18 15378439 15381649 - 116887643 MODEL JAAIVD010000013 pseudo 625889358 LOC116899926 U1 spliceosomal RNA 4 68508457 68508618 + 116899926 MODEL JAAIVD010000003;XR_004387896 snrna 625889361 LOC116908578 uncharacterized LOC116908578 9 2650237 2650971 + 116908578 MODEL JAAIVD010000002;XR_004388999 ncrna 625889366 LOC116887227 60 kDa heat shock protein, mitochondrial-like 18 28910731 28912618 - 116887227 MODEL JAAIVD010000013 pseudo 625889367 LOC116890621 U1 spliceosomal RNA 1 51983497 51983656 - 116890621 MODEL JAAIVD010000025;XR_004386768 snrna 625889370 LOC116889440 U6 spliceosomal RNA X 91241699 91241805 - 116889440 MODEL JAAIVD010000014;XR_004386402 snrna 625889373 Plpp4 phospholipid phosphatase 4 ENCODES a protein that exhibits diacylglycerol diphosphate phosphatase activity (ortholog); identical protein binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); phospholipid dephosphorylation (ortholog); regulation of calcium ion import (ortholog); ASSOCIATED WITH breast cancer (ortholog) 2 138496182 138575162 + 30032202 116892023 MODEL JAAIVD010000001;XM_032893482;XM_032893483 XP_032749373;XP_032749374 protein-coding 625889387 Scn11a sodium voltage-gated channel alpha subunit 11 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); action potential initiation (ortholog); acute inflammatory response (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); Charcot-Marie-Tooth disease (ortholog); Congenital Pain Insensitivity (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); C-fiber (ortholog) 8 110998417 111070628 - 22301074;30032202 116907919 MODEL JAAIVD010000027;XM_032911129;XM_032911130 XP_032767020;XP_032767021 sodium channel protein type 11 subunit alpha protein-coding 625889424 Epha2 EPH receptor A2 ENCODES a protein that exhibits growth factor binding (ortholog); molecular function activator activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); axial mesoderm formation (ortholog); blood vessel development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cataract (ortholog); cataract 6 multiple types (ortholog); disease of cellular proliferation (ortholog); FOUND IN cell surface (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 1 16816803 16845230 - 22301074;30032202 116893372 MODEL JAAIVD010000025;XM_032895174 XP_032751065 ephrin type-A receptor 2 protein-coding 625889445 Il15ra interleukin 15 receptor subunit alpha ENCODES a protein that exhibits interleukin-15 receptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-15-mediated signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Human Influenza (ortholog); Pneumococcal Pneumonia (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 14 17734633 17765069 + 30032202 116883656 MODEL JAAIVD010000009;XM_032884848;XM_032884849;XM_032884850 XP_032740739;XP_032740740;XP_032740741 interleukin-15 receptor subunit alpha protein-coding 625889459 LOC116902749 glyceraldehyde-3-phosphate dehydrogenase-like 6 62569822 62570814 + 116902749 MODEL JAAIVD010000024 pseudo 625889460 LOC116894096 putative olfactory receptor 52P1 2 103342758 103343707 + 22301074 116894096 MODEL JAAIVD010000001;XM_032895815 XP_032751706 protein-coding 625889463 Map4k5 mitogen-activated protein kinase kinase kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 83470972 83563479 - 22301074;30032202 116905125 MODEL JAAIVD010000026;XM_032907869 XP_032763760 protein-coding 625889499 Tmem263 transmembrane protein 263 1 163325669 163343809 - 116907389 MODEL JAAIVD010000025;XM_032910345;XM_032910353;XM_032910360 XP_032766236;XP_032766244;XP_032766251 protein-coding 625889513 Mydgf myeloid derived growth factor INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Keloid (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); extracellular space (ortholog) 4 87560150 87568865 - 30032202 116899174 MODEL JAAIVD010000003;XM_032900746 XP_032756637 myeloid-derived growth factor protein-coding 625889523 LOC116899924 U1 spliceosomal RNA 4 82030949 82031112 + 116899924 MODEL JAAIVD010000003;XR_004387894 snrna 625889526 LOC116893288 histone-lysine N-methyltransferase SETD7-like 2 148600777 148601944 + 116893288 MODEL JAAIVD010000001 pseudo 625889527 Add3 adducin 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN positive regulation of cytoskeleton organization (ortholog); positive regulation of vasoconstriction (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); brain ischemia (ortholog); cerebral palsy (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cell-cell junction (ortholog) 2 52648779 52680078 + 30032202 116891282 MODEL JAAIVD010000001;XM_032892186 XP_032748077 gamma-adducin protein-coding 625889545 Sema3d semaphorin 3D ASSOCIATED WITH Hirschsprung's disease (ortholog); sensorineural hearing loss (ortholog) 6 143079794 143271014 + 30032202 116904152 MODEL JAAIVD010000024;XM_032907050 XP_032762941 semaphorin-3D protein-coding 625889567 LOC116887792 small nucleolar RNA SNORA48 18 36869036 36869181 - 116887792 MODEL JAAIVD010000013;XR_004386287 snorna 625889570 LOC116894037 olfactory receptor 52E8-like 2 102371315 102372328 - 22301074 116894037 MODEL JAAIVD010000001;XM_032895756 XP_032751647 protein-coding 625889573 Myo5b myosin VB ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ionotropic glutamate receptor binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to glycine (ortholog); dendritic spine morphogenesis (ortholog); endosomal transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH amphetamine abuse (ortholog); Crohn's disease (ortholog); diarrhea (ortholog); FOUND IN apical cortex (ortholog); brush border (ortholog); dendritic spine (ortholog) 15 57226779 57524577 - 22301074;30032202 116884270 MODEL JAAIVD010000010;XM_032885354 XP_032741245 unconventional myosin-Vb protein-coding 625889617 Il4i1 interleukin 4 induced 1 ENCODES a protein that exhibits L-amino-acid oxidase activity (ortholog); INVOLVED IN aromatic amino acid metabolic process (ortholog); L-phenylalanine catabolic process (ortholog); L-tryptophan catabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular region (ortholog); immunological synapse (ortholog) 2 154702291 154707032 - 30032202 116892189 MODEL JAAIVD010000001;XM_032893715 XP_032749606 L-amino-acid oxidase protein-coding 625889628 Ghsr growth hormone secretagogue receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); growth hormone secretagogue receptor activity (ortholog); growth hormone-releasing hormone receptor activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ghrelin system pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Cardiac Fibrosis (ortholog); Digestive System Neoplasms (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); membrane raft (ortholog) 3 127326738 127330900 - 22301074;30032202 116896989 MODEL JAAIVD010000012;XM_032898583 XP_032754474 growth hormone secretagogue receptor type 1 protein-coding 625889634 Psph phosphoserine phosphatase ENCODES a protein that exhibits identical protein binding (ortholog); L-phosphoserine phosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); L-serine biosynthetic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amino acid metabolic disorder (ortholog); epilepsy (ortholog) 16 24184351 24206619 + 22301074;30032202 116885234 MODEL JAAIVD010000004;XM_032886472 XP_032742363 protein-coding 625889646 LOC116904484 pleiotropic regulator 1-like 6 145375184 145392682 - 116904484 MODEL JAAIVD010000024 pseudo 625889647 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56585415 56585486 - 116910784 MODEL JAAIVD010000002 trna 625889648 LOC116907149 high mobility group protein B1-like 8 65113008 65113594 - 116907149 MODEL JAAIVD010000027 pseudo 625889649 LOC116906373 U1 spliceosomal RNA 7 68076550 68076713 + 116906373 MODEL JAAIVD010000026;XR_004388642 snrna 625889652 Lcn6 lipocalin 6 INVOLVED IN acrosome reaction (ortholog); calcium ion homeostasis (ortholog); cell maturation (ortholog) 5 11510662 11516302 - 30032202 116900096 MODEL JAAIVD010000023;XM_032901874 XP_032757765 epididymal-specific lipocalin-6 protein-coding 625889663 Zc3h18 zinc finger CCCH-type containing 18 ENCODES a protein that exhibits mRNA cap binding complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN RNA destabilization (ortholog); FOUND IN nuclear speck (ortholog); protein-containing complex (ortholog); ribonucleoprotein complex (ortholog) 17 42012036 42056524 + 22301074 116886145 MODEL JAAIVD010000011;XM_032887499;XM_032887500;XM_032887501;XM_032887502 XP_032743390;XP_032743391;XP_032743392;XP_032743393 zinc finger CCCH domain-containing protein 18 protein-coding 625889695 Atcay ATCAY kinesin light chain interacting caytaxin ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN mitochondrion distribution (ortholog); negative regulation of glutamate metabolic process (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Ataxia (ortholog); Cayman type cerebellar ataxia (ortholog); cerebellar ataxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 153660161 153684617 + 30032202 116904520 MODEL JAAIVD010000025;XM_032907307 XP_032763198 caytaxin protein-coding 625889712 LOC116913407 uncharacterized LOC116913407 12 78897442 78898563 + 116913407 MODEL JAAIVD010000007;XR_004389613 ncrna 625889716 Fut4 fucosyltransferase 4 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); INVOLVED IN glycosphingolipid biosynthetic process (ortholog); Lewis x epitope biosynthetic process (ortholog); lymphocyte migration into lymph node (ortholog); ASSOCIATED WITH thrombosis (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); trans-Golgi network (ortholog) 8 10535940 10539938 - 22301074;30032202 116907480 MODEL JAAIVD010000027;XM_032910466 XP_032766357 alpha-(1,3)-fucosyltransferase 4 protein-coding 625889721 LOC116901620 low-density lipoprotein receptor-related protein 4 5 65644181 65664716 + 30032202 116901620 MODEL JAAIVD010000023;XM_032903671 XP_032759562 protein-coding 625889742 Acot12 acyl-CoA thioesterase 12 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); acyl-CoA metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH liver cancer (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog) 3 204443653 204482717 - 22301074;30032202 116895693 MODEL JAAIVD010000012;XM_032896895 XP_032752786 acetyl-coenzyme A thioesterase protein-coding 625889761 LOC116892237 zinc finger protein 260-like 2 156181381 156185334 + 30032202 116892237 MODEL JAAIVD010000001;XM_032893809 XP_032749700 protein-coding 625889767 Czib CXXC motif containing zinc binding protein ENCODES a protein that exhibits zinc ion binding (ortholog); ASSOCIATED WITH carnitine palmitoyltransferase II deficiency (ortholog) 1 46933812 46943166 - 30032202 116899206 MODEL JAAIVD010000025;XM_032900798;XM_032900807;XM_032900815 XP_032756689;XP_032756698;XP_032756706 protein-coding 625889785 Vhl von Hippel-Lindau tumor suppressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); angiogenesis (ortholog); blood vessel endothelial cell migration (ortholog); PARTICIPATES IN altered hypoxia inducible factor pathway; hypoxia inducible factor pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH adenoma (ortholog); Au-Kline Syndrome (ortholog); carcinoma (ortholog); FOUND IN cilium (ortholog); Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 6 32905242 32913452 - 116903402 MODEL JAAIVD010000024;XM_032905913 XP_032761804 von Hippel-Lindau disease tumor suppressor protein-coding 625889792 Dnal1 dynein axonemal light chain 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); dynein heavy chain binding (ortholog); INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog) 7 98210630 98226716 + 30032202 116906156 MODEL JAAIVD010000026;XM_032909137 XP_032765028 dynein light chain 1, axonemal protein-coding 625889802 Ano9 anoctamin 9 ENCODES a protein that exhibits calcium channel activity (ortholog); channel activity (ortholog); chloride channel inhibitor activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 2 8352852 8373109 + 30032202 116890887 MODEL JAAIVD010000001;XM_032891500 XP_032747391 anoctamin-9 protein-coding 625889828 Tmem236 transmembrane protein 236 14 9404995 9454205 - 116883810 MODEL JAAIVD010000009;XM_032885058 XP_032740949 protein-coding 625889836 LOC116912268 40S ribosomal protein S2-like 11 37307027 37307901 + 116912268 MODEL JAAIVD010000006 pseudo 625889837 Sox7 SRY-box transcription factor 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN endoderm formation (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 60456490 60463434 - 30032202 116913508 MODEL JAAIVD010000007;XM_032917712 XP_032773603 transcription factor SOX-7 protein-coding 625889843 LOC116895620 non-POU domain-containing octamer-binding protein-like 3 170884538 170886062 - 116895620 MODEL JAAIVD010000012 pseudo 625889844 Haus5 HAUS augmin like complex subunit 5 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 2 165341173 165351553 + 22301074;30032202 116892304 MODEL JAAIVD010000001;XM_032893922 XP_032749813 HAUS augmin-like complex subunit 5 protein-coding 625889868 Ctsw cathepsin W 2 2205591 2208994 + 30032202 116890715 MODEL JAAIVD010000001;XM_032891162 XP_032747053 protein-coding 625889882 Pura purine rich element binding protein A ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN dendritic transport of messenger ribonucleoprotein complex (ortholog); epithelial cell proliferation (ortholog); lymphocyte proliferation (ortholog); ASSOCIATED WITH Apnea (ortholog); autosomal dominant intellectual developmental disorder 31 (ortholog); Cerebral Autosomal Recessive Arteriopathy with Subcortical Infarcts and Leukoencephalopathy (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 15 8087571 8093690 - 22301074;30032202 116884760 MODEL JAAIVD010000010;XM_032885978 XP_032741869 transcriptional activator protein Pur-alpha protein-coding 625889888 LOC116889331 SMR1 protein-like X 122748776 122752620 - 30032202 116889331 MODEL JAAIVD010000014;XM_032890449 XP_032746340 protein-coding 625889893 CYTB cytochrome b MT 14127 15269 + 7751810 A0A090A0Z8;A0A1B4ZBC4;A0A678TMC5;A0A6B7HPY7;F2Q6R8;F2Q6R9;I0AW70;I0AWF4;I0AWM5;I0AWM6;K7TCB3;Q3LG78;Q9TDS3 REVIEWED EU273707 ABX45243;YP_002791028 protein-coding 625889894 Tph1 tryptophan hydroxylase 1 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN bone remodeling (ortholog); circadian rhythm (ortholog); mammary gland alveolus development (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog) 2 152706211 152727400 + 22301074;30032202 116892104 MODEL JAAIVD010000001;XM_032893581 XP_032749472 tryptophan 5-hydroxylase 1 protein-coding 625889910 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 152979584 152979655 + 116902679 MODEL JAAIVD010000023 trna 625889911 LOC116900360 olfactory receptor 5W2-like 5 69347477 69348418 - 22301074;30032202 116900360 MODEL JAAIVD010000023;XM_032902112 XP_032758003 protein-coding 625889915 Nr2c1 nuclear receptor subfamily 2 group C member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of retinoic acid receptor signaling pathway (ortholog); ASSOCIATED WITH Contracture (ortholog); endometriosis (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 1 173300421 173354698 + 22301074;30032202 116908304 MODEL JAAIVD010000025;XM_032911586 XP_032767477 protein-coding 625889933 LOC116896769 60S ribosomal protein L23-like 3 74735014 74735484 - 1840488;22301074;30032202 116896769 MODEL JAAIVD010000012;X58200;XM_032898227 CAA41177;XP_032754118 ribosomal protein L23 protein-coding 625889938 Stx12 syntaxin 12 INVOLVED IN autophagosome assembly (ortholog); cholesterol efflux (ortholog); endocytic recycling (ortholog); FOUND IN BLOC-1 complex (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 1 25356734 25385847 + 22301074;30032202 116895368 MODEL JAAIVD010000025;XM_032896668 XP_032752559 syntaxin-12 protein-coding 625889951 Eed embryonic ectoderm development ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); genomic imprinting (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cohen-Gibson Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromatin silencing complex (ortholog); cytosol (ortholog); ESC/E(Z) complex (ortholog) 2 111194445 111221784 + 22301074;30032202 116891857 MODEL JAAIVD010000001;XM_032893250;XM_032893251 XP_032749141;XP_032749142 polycomb protein EED protein-coding 625889972 LOC116909248 uncharacterized LOC116909248 9 74089424 74096921 - 116909248 MODEL JAAIVD010000002;XR_004389062 ncrna 625889977 LOC116890348 U6 spliceosomal RNA 1 102316885 102316985 + 116890348 MODEL JAAIVD010000025 pseudo 625889978 Gmds GDP-mannose 4,6-dehydratase ENCODES a protein that exhibits GDP-mannose 4,6-dehydratase activity (ortholog); identical protein binding (ortholog); NADP+ binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH open-angle glaucoma (ortholog); FOUND IN cytosol (ortholog) 14 50852374 51374688 - 22301074;30032202 116884023 MODEL JAAIVD010000009;XM_032885259 XP_032741150 GDP-mannose 4,6 dehydratase protein-coding 625889993 Plekhj1 pleckstrin homology domain containing J1 1 154086644 154089105 + 30032202 116904877 MODEL JAAIVD010000025;XM_032907478;XM_032907486;XM_032907492;XM_032907501 XP_032763369;XP_032763377;XP_032763383;XP_032763392 pleckstrin homology domain-containing family J member 1 protein-coding 625890014 Alg14 ALG14 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 15 (ortholog); congenital myopathy (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) 3 38518390 38590933 - 22301074;30032202 116896311 MODEL JAAIVD010000012;XM_032897399 XP_032753290 UDP-N-acetylglucosamine transferase subunit ALG14 homolog protein-coding 625890022 Slc15a5 solute carrier family 15 member 5 6 11383677 11472699 + 22301074 116904530 MODEL JAAIVD010000024;XM_032907323 XP_032763214 protein-coding 625890034 Kti12 KTI12 chromatin associated homolog 1 45998795 46005820 - 116899048 MODEL JAAIVD010000025;XM_032900520 XP_032756411 protein KTI12 homolog protein-coding 625890041 Htra2 HtrA serine peptidase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 8 (ortholog); Alzheimer's disease (ortholog); asphyxia neonatorum (ortholog); FOUND IN CD40 receptor complex (ortholog); chromatin (ortholog); cytoplasmic side of plasma membrane (ortholog) 6 63170554 63173711 + 22301074;30032202 116903634 MODEL JAAIVD010000024;XM_032906297 XP_032762188 serine protease HTRA2, mitochondrial protein-coding 625890053 LOC116913797 proteasome activator complex subunit 2-like 12 76823842 76824603 - 116913797 MODEL JAAIVD010000007 pseudo 625890054 Rcor2 REST corepressor 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 517692 523967 - 30032202 116894798 MODEL JAAIVD010000001;XM_032896458 XP_032752349 protein-coding 625890070 LOC116914967 40S ribosomal protein SA-like 13 18211023 18216246 - 116914967 MODEL JAAIVD010000008 pseudo 625890071 Bnc1 basonuclin zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); rDNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); positive regulation of epithelial cell proliferation (ortholog); positive regulation of oocyte maturation (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 118279383 118304956 + 30032202 116894265 MODEL JAAIVD010000001;XM_032895970;XM_032895971 XP_032751861;XP_032751862 basonuclin 1;zinc finger protein basonuclin-1 protein-coding 625890083 LOC116890890 interferon-induced transmembrane protein 2-like 2 8461684 8463898 + 30032202 116890890 MODEL JAAIVD010000001;XM_032891504;XM_032891505 XP_032747395;XP_032747396 protein-coding 625890093 Hacd2 3-hydroxyacyl-CoA dehydratase 2 ENCODES a protein that exhibits 3-hydroxyacyl-CoA dehydratase activity (ortholog); enzyme binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); sphingolipid biosynthetic process (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 4 19796150 19887224 + 30032202 116898804 MODEL JAAIVD010000003;XM_032900155 XP_032756046 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 2 protein-coding 625890104 LOC116889611 40S ribosomal protein SA-like Y 83165 84114 + 116889611 MODEL JAAIVD010000015;XR_004386504 pseudo 625890107 LOC116904661 U7 small nuclear RNA 6 7746289 7746351 + 116904661 MODEL JAAIVD010000024;XR_004388361 snrna 625890110 Atp1b4 ATPase Na+/K+ transporting family member beta 4 INVOLVED IN inorganic cation transmembrane transport (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) X 101639052 101659471 + 22301074;30032202 116888763 MODEL JAAIVD010000014;XM_032890055;XM_032890056 XP_032745946;XP_032745947 protein ATP1B4 protein-coding 625890124 Mucl3 mucin like 3 ASSOCIATED WITH Diffuse Panbronchiolitis (ortholog) 18 8854578 8862436 - 116887460 MODEL JAAIVD010000013;XM_032889067 XP_032744958 mucin-like protein 3 protein-coding 625890129 LOC116910061 protein Wfdc21 9 86928520 86934210 - 22301074 116910061 MODEL JAAIVD010000002;XM_032913872 XP_032769763 protein-coding 625890136 LOC116913168 tRNA wybutosine-synthesizing protein 5-like 12 50889787 50894072 - 116913168 MODEL JAAIVD010000007 pseudo 625890137 Snx5 sorting nexin 5 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dynactin binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN epidermal growth factor catabolic process (ortholog); negative regulation of blood pressure (ortholog); pinocytosis (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN brush border (ortholog); cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) 5 123896652 123915966 - 22301074;30032202 116902040 MODEL JAAIVD010000023;XM_032904323 XP_032760214 sorting nexin-5 protein-coding 625890155 LOC116911818 small nucleolar RNA SNORA48 10 63061815 63061959 + 116911818 MODEL JAAIVD010000005;XR_004389356 snorna 625890158 LOC116911012 zinc finger protein 883-like 1 215596900 215616232 + 30032202 116911012 MODEL JAAIVD010000025;XM_032914745;XM_032914753;XM_032914759 XP_032770636;XP_032770644;XP_032770650 zinc finger protein 431-like protein-coding 625890172 LOC116904679 small nucleolar RNA SNORA36 family 6 13837916 13838044 - 116904679 MODEL JAAIVD010000024;XR_004388377 snorna 625890175 Adcyap1r1 ADCYAP receptor type I ENCODES a protein that exhibits adenylate cyclase binding (ortholog); neuropeptide binding (ortholog); pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); development of primary female sexual characteristics (ortholog); ASSOCIATED WITH asthma (ortholog); cystitis (ortholog); Reperfusion Injury (ortholog); FOUND IN bicellular tight junction (ortholog); caveola (ortholog); cell surface (ortholog) 6 85550567 85623751 - 22301074;30032202 116903754 MODEL JAAIVD010000024;XM_032906442;XM_032906443;XM_032906444;XM_032906445 XP_032762333;XP_032762334;XP_032762335;XP_032762336 pituitary adenylate cyclase-activating polypeptide type I receptor protein-coding 625890207 Dcdc2c doublecortin domain containing 2C ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog) 7 41953874 41993516 - 22301074;30032202 116905703 MODEL JAAIVD010000026;XM_032908678;XM_032908679 XP_032764569;XP_032764570 doublecortin domain-containing protein 2C protein-coding 625890221 LOC116910728 small nucleolar RNA SNORA26 9 89795008 89795103 + 116910728 MODEL JAAIVD010000002 pseudo 625890222 LOC116900052 uncharacterized LOC116900052 5 4479009 4480802 + 116900052 MODEL JAAIVD010000023;XR_004387911 ncrna 625890226 Best4 bestrophin 4 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog) 1 40770461 40774322 + 22301074 116886657 MODEL JAAIVD010000025;XM_032888460 XP_032744351 bestrophin-4 protein-coding 625890237 C1qtnf7 C1q and TNF related 7 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN extracellular space (ortholog) 11 62148944 62248895 - 22301074 116912672 MODEL JAAIVD010000006;XM_032916789 XP_032772680 complement C1q tumor necrosis factor-related protein 7 protein-coding 625890244 LOC116911360 60S ribosomal protein L9-like 10 84661594 84662176 - 22301074;30032202 116911360 MODEL JAAIVD010000005;XM_032915284 XP_032771175 protein-coding 625890248 LOC116900262 olfactory receptor 5M10-like 5 63202851 63203786 + 22301074;30032202 116900262 MODEL JAAIVD010000023;XM_032902014 XP_032757905 protein-coding 625890251 LOC116903914 protein arginine N-methyltransferase 9 1 146344661 146355039 + 116903914 MODEL JAAIVD010000025;XM_032906683 XP_032762574 protein-coding 625890258 LOC116902255 uncharacterized LOC116902255 5 141900005 141905244 + 116902255 MODEL JAAIVD010000023;XR_004388059 ncrna 625890262 Ccdc174 coiled-coil domain containing 174 ASSOCIATED WITH Infantile Hypotonia with Psychomotor Retardation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 55041723 55061998 - 30032202 116903495 MODEL JAAIVD010000024;XM_032906084;XM_032906086 XP_032761975;XP_032761977 coiled-coil domain-containing protein 174 protein-coding 625890279 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42521654 42521725 + 116884234 MODEL JAAIVD010000009 trna 625890280 Sfxn5 sideroflexin 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); INVOLVED IN citrate transport (ortholog); positive regulation of cold-induced thermogenesis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 60869459 60989690 + 22301074;30032202 116903577 MODEL JAAIVD010000024;XM_032906200;XM_032906201 XP_032762091;XP_032762092 sideroflexin-5 protein-coding 625890301 LOC116892085 zinc finger protein 120-like 2 151811400 151839890 + 30032202 116892085 MODEL JAAIVD010000001;XM_032893559 XP_032749450 protein-coding 625890309 LOC116885558 reticulocalbin-1-like 1 159751320 159753314 - 116885558 MODEL JAAIVD010000025 pseudo 625890310 Znf354b zinc finger protein 354B ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 9 33570126 33579888 - 22301074 116908810 MODEL JAAIVD010000002;XM_032912216 XP_032768107 protein-coding 625890318 Sgpp1 sphingosine-1-phosphate phosphatase 1 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 7 89870140 89889969 - 30032202 116905175 MODEL JAAIVD010000026;XM_032907952 XP_032763843 protein-coding 625890325 LOC116908064 solute carrier family 22 member 13 8 110439190 110450364 - 22301074 116908064 MODEL JAAIVD010000027;XM_032911333 XP_032767224 protein-coding 625890338 LOC116887793 small nucleolar RNA SNORA48 18 26522041 26522181 + 116887793 MODEL JAAIVD010000013;XR_004386288 snorna 625890341 LOC116890822 uncharacterized LOC116890822 2 5157033 5193305 - 116890822 MODEL JAAIVD010000001;XM_032891326 XP_032747217 uncharacterized protein LOC116890822 protein-coding 625890357 Slc38a9 solute carrier family 38 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN amino acid transmembrane transport (ortholog); asparagine transport (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 3 184051742 184124156 - 30032202 116897188 MODEL JAAIVD010000012;XM_032898883 XP_032754774 sodium-coupled neutral amino acid transporter 9 protein-coding 625890376 Abl2 ABL proto-oncogene 2, non-receptor tyrosine kinase ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 10 35908381 35988609 + 22301074;30032202 116911104 MODEL JAAIVD010000005;XM_032914937;XM_032914938;XM_032914939;XM_032914941;XM_032914942;XM_032914943;XM_032914944;XM_032914945;XM_032914946 XP_032770828;XP_032770829;XP_032770830;XP_032770832;XP_032770833;XP_032770834;XP_032770835;XP_032770836;XP_032770837 tyrosine-protein kinase ABL2 protein-coding 625890408 Csn2 casein beta ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN lactation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 11 1209952 1217161 + 22301074;30032202 116912649 MODEL JAAIVD010000006;XM_032916767 XP_032772658 beta-casein protein-coding 625890421 LOC116913800 granzyme-like protein 1 12 68699834 68798164 + 22301074;30032202 116913800 MODEL JAAIVD010000007;XM_032918106 XP_032773997 protein-coding 625890430 LOC116908513 uncharacterized LOC116908513 9 90949728 90954716 + 116908513 MODEL JAAIVD010000002;XR_004388989 ncrna 625890435 LOC116883269 AP-3 complex subunit sigma-1-like 14 80844903 80845460 - 116883269 MODEL JAAIVD010000009 pseudo 625890436 Slc38a6 solute carrier family 38 member 6 ENCODES a protein that exhibits L-glutamate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); FOUND IN plasma membrane (ortholog) 7 87540920 87602617 + 30032202 116905158 MODEL JAAIVD010000026;XM_032907930;XM_032907932;XM_032907933 XP_032763821;XP_032763823;XP_032763824 probable sodium-coupled neutral amino acid transporter 6 protein-coding 625890462 LOC116912474 MICOS complex subunit Mic26-like 11 76526715 76527312 + 116912474 MODEL JAAIVD010000006 pseudo 625890463 Fam13c family with sequence similarity 13 member C ASSOCIATED WITH prostate cancer (ortholog) 18 16319949 16433897 - 116887525 MODEL JAAIVD010000013;XM_032889150;XM_032889151;XM_032889152 XP_032745041;XP_032745042;XP_032745043 protein FAM13C protein-coding 625890487 Zc3h8 zinc finger CCCH-type containing 8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II intronic transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of T cell differentiation in thymus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) 5 107718438 107733705 - 22301074;30032202 116901951 MODEL JAAIVD010000023;XM_032904185 XP_032760076 zinc finger CCCH domain-containing protein 8 protein-coding 625890500 Taf13 TATA-box binding protein associated factor 13 ENCODES a protein that exhibits DNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 60 (ortholog); genetic disease (ortholog); primary autosomal recessive microcephaly (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 49683355 49693448 - 22301074;30032202 116895776 MODEL JAAIVD010000012;XM_032896927 XP_032752818 transcription initiation factor TFIID subunit 13 protein-coding 625890507 Ptpn21 protein tyrosine phosphatase non-receptor type 21 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog) 7 111838958 111895961 - 22301074;30032202 116905346 MODEL JAAIVD010000026;XM_032908246 XP_032764137 tyrosine-protein phosphatase non-receptor type 21 protein-coding 625890530 LOC116901274 uncharacterized LOC116901274 5 10731090 10736299 - 116901274 MODEL JAAIVD010000023;XR_004387971 ncrna 625890535 Zswim5 zinc finger SWIM-type containing 5 ASSOCIATED WITH Breast Neoplasms (ortholog) 1 40512214 40620261 + 22301074;30032202 116898532 MODEL JAAIVD010000025;XM_032899755 XP_032755646 zinc finger SWIM domain-containing protein 5 protein-coding 625890553 LOC116885437 phosphoglycerate mutase 1-like 1 68652551 68692680 + 116885437 MODEL JAAIVD010000025 pseudo 625890554 Samd4b sterile alpha motif domain containing 4B ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellar neuron development (ortholog); FOUND IN cytosol (ortholog) 2 167559422 167597916 + 22301074;30032202 116892391 MODEL JAAIVD010000001;XM_032894063 XP_032749954 protein Smaug homolog 2 protein-coding 625890571 Brpf1 bromodomain and PHD finger containing 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); common myeloid progenitor cell proliferation (ortholog); neural tube formation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone acetyltransferase complex (ortholog) 6 33210599 33226609 - 22301074;30032202 116903421 MODEL JAAIVD010000024;XM_032905949;XM_032905950;XM_032905951;XM_032905952 XP_032761840;XP_032761841;XP_032761842;XP_032761843 peregrin protein-coding 625890594 LOC116908444 small nucleolar RNA U3 8 5395607 5395713 - 116908444 MODEL JAAIVD010000027 pseudo 625890595 LOC116898387 EEF1A lysine methyltransferase 4-like 4 73421264 73422026 - 116898387 MODEL JAAIVD010000003 pseudo 625890596 LOC116893779 lipase member M 2 33712901 33731624 + 22301074 116893779 MODEL JAAIVD010000001;XM_032895482 XP_032751373 protein-coding 625890609 LOC116884633 desmocollin-3 15 23523726 23557439 + 22301074;30032202 116884633 MODEL JAAIVD010000010;XM_032885773 XP_032741664 protein-coding 625890628 Tm2d3 TM2 domain containing 3 INVOLVED IN lateral inhibition (ortholog) 2 134648738 134660910 - 116892001 MODEL JAAIVD010000001;XM_032893457;XM_032893458;XM_032893459 XP_032749348;XP_032749349;XP_032749350 TM2 domain-containing protein 3 protein-coding 625890646 LOC116907215 heterogeneous nuclear ribonucleoprotein L-like 8 7641308 7657500 + 116907215 MODEL JAAIVD010000027 pseudo 625890647 LOC116907326 40S ribosomal protein S16-like 8 82138484 82138995 + 22301074;30032202 116907326 MODEL JAAIVD010000027;XM_032910271;XM_032910272 XP_032766162;XP_032766163 protein-coding 625890655 Lrrc42 leucine rich repeat containing 42 1 47556962 47578570 + 22301074 116899270 MODEL JAAIVD010000025;XM_032900897;XM_032900906 XP_032756788;XP_032756797 leucine-rich repeat-containing protein 42 protein-coding 625890670 Spmip5 sperm microtubule inner protein 5 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 2 57323427 57329000 + 116893836 MODEL JAAIVD010000001;XM_032895552 XP_032751443 C2H10orf82 chromosome 2 C10orf82 homolog;sperm associated microtubule inner protein 5;uncharacterized protein C10orf82 homolog protein-coding 625890677 LOC116904358 multifunctional protein ADE2-like 6 80026902 80027583 - 116904358 MODEL JAAIVD010000024 pseudo 625890678 Angptl1 angiopoietin like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); FOUND IN extracellular space (ortholog) 10 36194659 36208210 + 30032202 116911603 MODEL JAAIVD010000005;XM_032915579 XP_032771470 angiopoietin-related protein 1 protein-coding 625890685 LOC116889810 transmembrane protein 35A-like 116889810 MODEL JAAIVD010000897 pseudo 625890686 Cramp1 cramped chromatin regulator 1 9 2243707 2289623 - 30032202 116908692 MODEL JAAIVD010000002;XM_032912009;XM_032912010 XP_032767900;XP_032767901 cramped chromatin regulator homolog 1;protein cramped-like protein-coding 625890716 LOC116906884 olfactory receptor 8B12 8 72769874 72770806 + 22301074;30032202 116906884 MODEL JAAIVD010000027;XM_032909798 XP_032765689 protein-coding 625890719 LOC116904713 small nucleolar RNA SNORA17 6 16958184 16958315 + 116904713 MODEL JAAIVD010000024;XR_004388407 snorna 625890722 LOC116888003 angiomotin-like protein 2 X 76178756 76318262 - 116888003 MODEL JAAIVD010000014 pseudo 625890723 Srbd1 S1 RNA binding domain 1 7 6829834 7004812 + 22301074;30032202 116905765 MODEL JAAIVD010000026;XM_032908732 XP_032764623 S1 RNA-binding domain-containing protein 1 protein-coding 625890748 Gas2 growth arrest specific 2 INVOLVED IN antral ovarian follicle growth (ortholog); basement membrane organization (ortholog); initiation of primordial ovarian follicle growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal recessive nonsyndromic deafness 125 (ortholog); Salivary Gland Neoplasms (ortholog) 2 148651421 148763744 - 22301074;30032202 116892063 MODEL JAAIVD010000001;XM_032893529;XM_032893530;XM_032893531;XM_032893533;XM_032893534 XP_032749420;XP_032749421;XP_032749422;XP_032749424;XP_032749425 growth arrest-specific protein 2 protein-coding 625890773 Tent4a terminal nucleotidyltransferase 4A ENCODES a protein that exhibits guanylyltransferase activity (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN Golgi apparatus (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 2 200912976 200946439 - 30032202 116892905 MODEL JAAIVD010000001;XM_032894824;XM_032894825 XP_032750715;XP_032750716 protein-coding 625890791 Fgr FGR proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits Fc-gamma receptor I complex binding (ortholog); immunoglobulin receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN bone mineralization (ortholog); defense response to Gram-positive bacterium (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); aggresome (ortholog); cytoskeleton (ortholog) 1 25234016 25250897 - 22301074;30032202 116895348 MODEL JAAIVD010000025;XM_032896652 XP_032752543 tyrosine-protein kinase Fgr protein-coding 625890808 Samsn1 SAM domain, SH3 domain and nuclear localization signals 1 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN negative regulation of adaptive immune response (ortholog); negative regulation of B cell activation (ortholog); negative regulation of peptidyl-tyrosine phosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 4 66078891 66129642 + 22301074 116899050 MODEL JAAIVD010000003;XM_032900522 XP_032756413 SAM domain-containing protein SAMSN-1 protein-coding 625890820 Tceanc transcription elongation factor A N-terminal and central domain containing X 30641566 30646192 - 22301074;30032202 116889148 MODEL JAAIVD010000014;XM_032890316 XP_032746207 transcription elongation factor A N-terminal and central domain-containing protein protein-coding 625890827 Plpp6 phospholipid phosphatase 6 ENCODES a protein that exhibits hydrolase activity (ortholog); isoprenoid diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); farnesyl diphosphate catabolic process (ortholog); geranyl diphosphate metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) 2 29025292 29028302 + 30032202 116891065 MODEL JAAIVD010000001;XM_032891771 XP_032747662 protein-coding 625890832 Sertad2 SERTA domain containing 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 11 88805021 88888719 + 30032202 116912142 MODEL JAAIVD010000006;XM_032916055;XM_032916056 XP_032771946;XP_032771947 SERTA domain-containing protein 2 protein-coding 625890841 Terb1 telomere repeat binding bouquet formation protein 1 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 3 (ortholog); spermatogenic failure 60 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 17 12727139 12780665 - 30032202 116886477 MODEL JAAIVD010000011;XM_032887981 XP_032743872 telomere repeats-binding bouquet formation protein 1 protein-coding 625890863 Il23r interleukin 23 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-12 receptor binding (ortholog); interleukin-23 binding (ortholog); INVOLVED IN interleukin-23-mediated signaling pathway (ortholog); negative regulation of interleukin-10 production (ortholog); positive regulation of defense response to virus by host (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); arthritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); interleukin-23 receptor complex (ortholog); receptor complex (ortholog) 6 76970947 77058358 - 22301074;30032202 116904354 MODEL JAAIVD010000024;XM_032907244 XP_032763135 interleukin-23 receptor protein-coding 625890877 LOC116907092 putative gustatory receptor clone PTE01 8 16561963 16572592 + 22301074;30032202 116907092 MODEL JAAIVD010000027;XM_032910056;XM_032910058 XP_032765947;XP_032765949 olfactory receptor 18 protein-coding 625890885 LOC116885339 uncharacterized LOC116885339 16 7057029 7058750 - 116885339 MODEL JAAIVD010000004;XR_004386003 ncrna 625890890 Commd9 COMM domain containing 9 INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 5 79725627 79740278 + 116901674 MODEL JAAIVD010000023;XM_032903789 XP_032759680 COMM domain-containing protein 9 protein-coding 625890900 Ccdc68 coiled-coil domain containing 68 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) 15 61298152 61325717 - 30032202 116884618 MODEL JAAIVD010000010;XM_032885759 XP_032741650 coiled-coil domain-containing protein 68 protein-coding 625890915 Jade2 jade family PHD finger 2 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN neuron projection extension (ortholog); positive regulation of neurogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) 9 34405731 34449753 - 30032202 116909563 MODEL JAAIVD010000002;XM_032913181;XM_032913182 XP_032769072;XP_032769073 E3 ubiquitin-protein ligase Jade-2 protein-coding 625890936 LOC116906098 multifunctional protein ADE2-like 7 73447016 73448453 - 116906098 MODEL JAAIVD010000026 pseudo 625890937 Rbks ribokinase ENCODES a protein that exhibits identical protein binding (ortholog); ribokinase activity (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway 7 22463522 22540326 + 22301074 116905964 MODEL JAAIVD010000026;XM_032908969 XP_032764860 protein-coding 625890949 LOC116896347 28S ribosomal protein S17, mitochondrial-like 3 48879526 48880540 - 116896347 MODEL JAAIVD010000012 pseudo 625890950 LOC116890605 small nucleolar RNA SNORA26 1 156617946 156618061 + 116890605 MODEL JAAIVD010000025;XR_004386756 snorna 625890953 LOC116887082 uncharacterized LOC116887082 18 45972963 45978093 + 116887082 MODEL JAAIVD010000013;XR_004386199 ncrna 625890957 LOC116890321 U6 spliceosomal RNA 1 3927539 3927645 + 116890321 MODEL JAAIVD010000025;XR_004386544 snrna 625890960 Prm2 protamine 2 ENCODES a protein that exhibits cadmium ion binding (ortholog); zinc ion binding (ortholog); INVOLVED IN nucleus organization (ortholog); spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleus (ortholog) 9 11562235 11563994 + 22301074;30032202 116910582 MODEL JAAIVD010000002;XM_032914504 XP_032770395 protamine-2 protein-coding 625890966 F2rl1 F2R like trypsin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); defense response to virus (ortholog); establishment of endothelial barrier (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 2; ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); Experimental Arthritis (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) 3 222689461 222702301 + 22301074;30032202 116897371 MODEL JAAIVD010000012;XM_032899128 XP_032755019 proteinase-activated receptor 2 protein-coding 625890972 LOC116899798 U7 small nuclear RNA 4 9189545 9189611 - 116899798 MODEL JAAIVD010000003 pseudo 625890973 Unc5b unc-5 netrin receptor B ENCODES a protein that exhibits netrin receptor activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Subarachnoid Hemorrhage (ortholog); FOUND IN membrane raft (ortholog) 18 26584938 26651239 - 22301074;30032202 116886913 MODEL JAAIVD010000013;XM_032888383;XM_032888384 XP_032744274;XP_032744275 netrin receptor UNC5B protein-coding 625890997 Samd5 sterile alpha motif domain containing 5 FOUND IN cytoplasm (ortholog) 2 227414071 227824210 + 22301074 116893028 MODEL JAAIVD010000001;XM_032894989;XM_032894990 XP_032750880;XP_032750881 sterile alpha motif domain-containing protein 5 protein-coding 625891008 LOC116906402 small nucleolar RNA SNORD113/SNORD114 family 7 127247655 127247728 + 116906402 MODEL JAAIVD010000026;XR_004388668 snorna 625891011 LOC116899018 keratin-associated protein 13-1-like 4 55135608 55136418 + 116899018 MODEL JAAIVD010000003;XM_032900467 XP_032756358 protein-coding 625891016 LOC116912582 40S ribosomal protein S3-like 11 6122101 6122761 - 116912582 MODEL JAAIVD010000006 pseudo 625891017 LOC116886889 antizyme inhibitor 2-like 1 27934341 27945691 + 30032202 116886889 MODEL JAAIVD010000025;XM_032888350 XP_032744241 protein-coding 625891028 LOC116891631 ubiquitin-like protein FUBI 2 87109927 87110356 + 22301074;30032202 116891631 MODEL JAAIVD010000001;XM_032892844 XP_032748735 protein-coding 625891033 Klk13 kallikrein related peptidase 13 ENCODES a protein that exhibits endopeptidase activity (ortholog); hydrolase activity (ortholog); INVOLVED IN protein processing (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); secretory granule (ortholog) 2 155670123 155681697 - 22301074 116894360 MODEL JAAIVD010000001;XM_032896061 XP_032751952 kallikrein-13 protein-coding 625891043 Vsir V-set immunoregulatory receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of CD4-positive, alpha-beta T cell proliferation (ortholog); negative regulation of CD8-positive, alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 18 26167079 26189183 + 30032202 116886927 MODEL JAAIVD010000013;XM_032888408;XM_032888409 XP_032744299;XP_032744300 V-type immunoglobulin domain-containing suppressor of T-cell activation protein-coding 625891056 LOC116883482 uncharacterized LOC116883482 14 25825635 25826549 + 116883482 MODEL JAAIVD010000009;XR_004385763 ncrna 625891060 LOC116900097 epididymal-specific lipocalin-5 5 11522031 11525469 - 30032202 116900097 MODEL JAAIVD010000023;XM_032901876 XP_032757767 protein-coding 625891068 LOC116892707 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178519402 178526184 + 116892707 MODEL JAAIVD010000001 pseudo 625891069 Yme1l1 YME1 like 1 ATPase ENCODES a protein that exhibits ATP-dependent peptidase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to starvation (ortholog); mitochondrial protein catabolic process (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); dilated cardiomyopathy (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 14 1403011 1438729 - 22301074;30032202 116915209 MODEL JAAIVD010000009;XM_032919579;XM_032919580 XP_032775470;XP_032775471 ATP-dependent zinc metalloprotease YME1L1 protein-coding 625891095 Ms4a3 membrane spanning 4-domains A3 FOUND IN cytoplasm (ortholog) 2 11215606 11225330 + 22301074 116893656 MODEL JAAIVD010000001;XM_032895373 XP_032751264 membrane-spanning 4-domains subfamily A member 3 protein-coding 625891103 Cxcl10 C-X-C motif chemokine ligand 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to heat (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 11 5197749 5200080 - 22301074;30032202 116912480 MODEL JAAIVD010000006;XM_032916545 XP_032772436 C-X-C motif chemokine 10 protein-coding 625891111 Fxyd6 FXYD domain containing ion transport regulator 6 ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) 8 39903175 39930087 + 22301074;30032202 116907320 MODEL JAAIVD010000027;XM_032910265;XM_032910266 XP_032766156;XP_032766157 FXYD domain-containing ion transport regulator 6 protein-coding 625891127 P2rx2 purinergic receptor P2X 2 ENCODES a protein that exhibits ATP binding (ortholog); cadmium ion binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); chemical synaptic transmission (ortholog); detection of hypoxic conditions in blood by carotid body chemoreceptor signaling (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 41 (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); dendritic spine (ortholog) 16 44018537 44021763 + 22301074;30032202 116885782 MODEL JAAIVD010000004;XM_032887110;XM_032887111;XM_032887113;XM_032887114;XM_032887115 XP_032743001;XP_032743002;XP_032743004;XP_032743005;XP_032743006 P2X purinoceptor 2 protein-coding 625891152 LOC116885562 paired immunoglobulin-like type 2 receptor beta 16 16175797 16181448 - 30032202 116885562 MODEL JAAIVD010000004;XM_032886855 XP_032742746 protein-coding 625891160 LOC116891119 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1 2 34999502 35203861 - 22301074;30032202 116891119 MODEL JAAIVD010000001;XM_032891834 XP_032747725 protein-coding 625891197 LOC116906694 uncharacterized LOC116906694 8 45596119 45598135 - 116906694 MODEL JAAIVD010000027;XR_004388763 ncrna 625891202 Mefv MEFV innate immunity regulator, pyrin ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH acne (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytoplasm (ortholog); microtubule associated complex (ortholog) 9 38530676 38540806 + 22301074 116909686 MODEL JAAIVD010000002;XM_032913346;XM_032913347 XP_032769237;XP_032769238 MEFV innate immuity regulator, pyrin;pyrin protein-coding 625891220 Apoa4 apolipoprotein A4 ENCODES a protein that exhibits antioxidant activity (ortholog); cholesterol transfer activity (ortholog); copper ion binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular space (ortholog) 8 40760793 40763289 + 22301074;30032202 116906804 MODEL JAAIVD010000027;XM_032909678 XP_032765569 apolipoprotein A-IV protein-coding 625891227 LOC116903199 C-type lectin domain family 2 member D2-like 6 18795692 18803442 + 30032202 116903199 MODEL JAAIVD010000024;XM_032905576 XP_032761467 protein-coding 625891235 LOC116913203 60S ribosomal protein L35a-like 12 67168751 67169118 - 116913203 MODEL JAAIVD010000007 pseudo 625891236 LOC116908226 proteasome subunit alpha type-3-like 8 77899502 77900178 - 116908226 MODEL JAAIVD010000027 pseudo 625891237 Bmerb1 bMERB domain containing 1 INVOLVED IN negative regulation of cell motility involved in cerebral cortex radial glia guided migration (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN microtubule cytoskeleton (ortholog) 9 8839602 8963241 - 30032202 116910219 MODEL JAAIVD010000002;XM_032914108 XP_032769999 bMERB domain-containing protein 1 protein-coding 625891247 LOC116903887 small ubiquitin-related modifier 1-like 6 24696498 24696791 - 116903887 MODEL JAAIVD010000024 pseudo 625891248 LOC116906412 small nucleolar RNA SNORD45 7 84565489 84565559 - 116906412 MODEL JAAIVD010000026;XR_004388674 snorna 625891251 Lypd5 LY6/PLAUR domain containing 5 2 170363339 170368396 - 30032202 116894492 MODEL JAAIVD010000001;XM_032896201 XP_032752092 ly6/PLAUR domain-containing protein 5 protein-coding 625891258 Clba1 clathrin binding box of aftiphilin containing 1 7 130406424 130413381 + 30032202 116905521 MODEL JAAIVD010000026;XM_032908543 XP_032764434 uncharacterized protein CLBA1 protein-coding 625891267 LOC116898821 coiled-coil domain-containing protein 58 4 21048888 21066148 + 22301074;30032202 116898821 MODEL JAAIVD010000003;XM_032900173 XP_032756064 protein-coding 625891275 Pstk phosphoseryl-tRNA kinase ENCODES a protein that exhibits L-seryl-tRNA(Sec) kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog) 2 70458199 70468662 - 30032202 116891405 MODEL JAAIVD010000001;XM_032892432 XP_032748323 L-seryl-tRNA(Sec) kinase protein-coding 625891285 Slc71a1 solute carrier family 71 member 1 INVOLVED IN acrosome assembly (ortholog); sperm mitochondrion organization (ortholog); spermatid development (ortholog) 3 43063302 43093991 + 22301074 116896330 MODEL JAAIVD010000012;XM_032897428 XP_032753319 Mfsd14a hippocampus abundant transcript 1 protein;major facilitator superfamily domain containing 14A protein-coding 625891301 LOC116900118 olfactory receptor 50-like 5 14179662 14180591 + 22301074;30032202 116900118 MODEL JAAIVD010000023;XM_032901894 XP_032757785 protein-coding 625891304 Zglp1 zinc finger GATA like protein 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); oocyte development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 8 17325122 17330171 - 22301074;30032202 116907467 MODEL JAAIVD010000027;XM_032910452 XP_032766343 GATA-type zinc finger protein 1 protein-coding 625891313 Krit1 KRIT1 ankyrin repeat containing ENCODES a protein that exhibits microtubule binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); integrin activation (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Angiokeratoma Corporis Diffusum with Arteriovenous Fistulas (ortholog); cavernous hemangioma (ortholog); Cavernous Malformations of CNS and Retina (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 6 136092373 136125581 + 22301074;30032202 116904121 MODEL JAAIVD010000024;XM_032907006 XP_032762897 krev interaction trapped protein 1 protein-coding 625891334 LOC116896012 glyceraldehyde-3-phosphate dehydrogenase-like 3 176236102 176237078 - 116896012 MODEL JAAIVD010000012 pseudo 625891335 Nub1 negative regulator of ubiquitin like proteins 1 INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasomal protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); Lewy body (ortholog); nucleolus (ortholog) 6 153891414 153921488 + 22301074;30032202 116904215 MODEL JAAIVD010000024;XM_032907146 XP_032763037 NEDD8 ultimate buster 1 protein-coding 625891354 Was WASP actin nucleation promoting factor ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); actin filament-based movement (ortholog); actin polymerization or depolymerization (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); genetic disease (ortholog); hemorrhagic disease (ortholog); FOUND IN actin filament (ortholog); cell-cell junction (ortholog); cytosol (ortholog) X 15485317 15493832 - 22301074;30032202 116888596 MODEL JAAIVD010000014;XM_032889895 XP_032745786 wiskott-Aldrich syndrome protein protein-coding 625891370 LOC116895604 eukaryotic translation initiation factor 5A-1-like 3 157224351 157224878 - 116895604 MODEL JAAIVD010000012 pseudo 625891371 Etv6 ETS variant transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); mesenchymal cell apoptotic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) 6 15177337 15411906 - 22301074;30032202 116903177 MODEL JAAIVD010000024;XM_032905548;XM_032905549 XP_032761439;XP_032761440 transcription factor ETV6 protein-coding 625891386 Vps26b VPS26, retromer complex component B INVOLVED IN cellular response to type II interferon (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); late endosome (ortholog) 8 22902804 22923726 - 22301074;30032202 116908036 MODEL JAAIVD010000027;XM_032911308 XP_032767199 vacuolar protein sorting-associated protein 26B protein-coding 625891396 Rpl23a ribosomal protein L23a ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); TORC2 complex binding (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 9 92255274 92258098 + 22301074;30032202;8428950 116909412 MODEL JAAIVD010000002;X65228;XM_032912977 CAA46336;XP_032768868 60S ribosomal protein L23a protein-coding 625891405 LOC116893893 thymosin beta-4-like 2 74074335 74074927 + 22301074;30032202 116893893 MODEL JAAIVD010000001;XM_032895612 XP_032751503 protein-coding 625891410 LOC116887639 DNA-directed RNA polymerase III subunit RPC4-like 18 12652889 12707735 - 116887639 MODEL JAAIVD010000013 pseudo 625891411 Gpr61 G protein-coupled receptor 61 ENCODES a protein that exhibits arrestin family protein binding (ortholog); INVOLVED IN ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 3 50103727 50110433 + 22301074;30032202 116896370 MODEL JAAIVD010000012;XM_032897490;XR_004387334;XR_004387335 XP_032753381 G-protein coupled receptor 61 protein-coding 625891422 LOC116900174 olfactory receptor 1Q1-like 5 14632522 14633448 + 22301074;30032202 116900174 MODEL JAAIVD010000023;XM_032901930 XP_032757821 protein-coding 625891425 LOC116887886 tubulin beta-6 chain-like X 49939915 49952271 - 116887886 MODEL JAAIVD010000014 pseudo 625891426 Med4 mediator complex subunit 4 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH cervical cancer (ortholog); endometriosis (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 12 50859752 50870035 - 22301074;30032202 116913728 MODEL JAAIVD010000007;XM_032918033 XP_032773924 mediator of RNA polymerase II transcription subunit 4 protein-coding 625891437 LOC116904395 denticleless protein homolog 6 98500155 98501282 + 116904395 MODEL JAAIVD010000024 pseudo 625891438 Fut9 fucosyltransferase 9 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fucosylation (ortholog); glycosphingolipid biosynthetic process (ortholog); Lewis x epitope biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog); trans-Golgi network membrane (ortholog) 1 116852581 116853930 + 22301074;30032202 116902456 MODEL JAAIVD010000025;XM_032905024 XP_032760915 alpha-(1,3)-fucosyltransferase 9 protein-coding 625891443 LOC116885831 small nuclear ribonucleoprotein E-like 16 30912663 30913164 - 116885831 MODEL JAAIVD010000004 pseudo 625891444 Hmgxb3 HMG-box containing 3 15 70767549 70814593 + 116884974 MODEL JAAIVD010000010;XM_032886195 XP_032742086 HMG domain-containing protein 3 protein-coding 625891468 Stk11ip serine/threonine kinase 11 interacting protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog) 4 148874698 148890124 + 30032202 116899540 MODEL JAAIVD010000003;XM_032901421;XM_032901422;XM_032901424;XM_032901425;XM_032901426;XM_032901427;XM_032901428 XP_032757312;XP_032757313;XP_032757315;XP_032757316;XP_032757317;XP_032757318;XP_032757319 serine/threonine-protein kinase 11-interacting protein protein-coding 625891512 LOC116903752 uncharacterized LOC116903752 6 56619262 56633598 + 116903752 MODEL JAAIVD010000024;XR_004388294 ncrna 625891516 Ildr1 immunoglobulin like domain containing receptor 1 ENCODES a protein that exhibits high-density lipoprotein particle receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epithelial structure maintenance (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 42 (ortholog); Deafness (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 4 21552332 21585165 + 30032202 116898825 MODEL JAAIVD010000003;XM_032900177 XP_032756068 immunoglobulin-like domain-containing receptor 1 protein-coding 625891528 LOC116892053 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143771776 143772694 - 116892053 MODEL JAAIVD010000001 pseudo 625891529 LOC116899901 small nucleolar RNA SNORA17 4 98219439 98219572 - 116899901 MODEL JAAIVD010000003;XR_004387874 snorna 625891532 Rabac1 Rab acceptor 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); proline-rich region binding (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 2 169733629 169736528 + 30032202 116892474 MODEL JAAIVD010000001;XM_032894199 XP_032750090 prenylated Rab acceptor protein 1 protein-coding 625891541 LOC116912812 vomeronasal type-1 receptor 4-like 11 96576764 96577977 + 22301074;30032202 116912812 MODEL JAAIVD010000006;XM_032916980 XP_032772871 protein-coding 625891545 Pfn2 profilin 2 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 3 96423136 96428983 - 22301074;30032202 116896849 MODEL JAAIVD010000012;XM_032898354 XP_032754245 profilin-2 protein-coding 625891552 LOC116911837 small nucleolar RNA SNORA17 10 88030543 88030673 - 116911837 MODEL JAAIVD010000005;XR_004389371 snorna 625891555 LOC116894432 60S ribosomal protein L13a-like 2 160301265 160301832 + 116894432 MODEL JAAIVD010000001 pseudo 625891556 Il18r1 interleukin 18 receptor 1 ENCODES a protein that exhibits interleukin-18 binding (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN interleukin-18-mediated signaling pathway (ortholog); natural killer cell activation (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); asthma (ortholog); autoimmune disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog) 4 116700504 116732965 + 30032202 116899326 MODEL JAAIVD010000003;XM_032901016 XP_032756907 interleukin-18 receptor 1 protein-coding 625891572 LOC116912935 U7 small nuclear RNA 11 73908860 73908922 + 116912935 MODEL JAAIVD010000006;XR_004389505 snrna 625891575 Dqx1 DEAQ-box RNA dependent ATPase 1 ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog) 6 63157935 63167322 - 30032202 116903633 MODEL JAAIVD010000024;XM_032906293;XM_032906294;XM_032906295 XP_032762184;XP_032762185;XP_032762186 ATP-dependent RNA helicase DQX1 protein-coding 625891595 Mix23 mitochondrial matrix import factor 23 FOUND IN mitochondrion (ortholog) 4 20842277 20861622 + 22301074;30032202 116898818 MODEL JAAIVD010000003;XM_032900172 XP_032756063 Ccdc58 coiled-coil domain containing 58;coiled-coil domain-containing protein 58 protein-coding 625891604 Zmynd11 zinc finger MYND-type containing 11 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); histone H3K36me3 reader activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 1 (ortholog); autosomal dominant intellectual developmental disorder 30 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 14 23354008 23442400 - 22301074;30032202 116883745 MODEL JAAIVD010000009;XM_032884981;XM_032884982;XM_032884983;XM_032884984;XM_032884985;XM_032884986;XM_032884987;XM_032884988;XM_032884989;XM_032884990 XP_032740872;XP_032740873;XP_032740874;XP_032740875;XP_032740876;XP_032740877;XP_032740878;XP_032740879;XP_032740880;XP_032740881 zinc finger MYND domain-containing protein 11 protein-coding 625891648 Fam174c family with sequence similarity 174 member C FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 1 154701437 154703414 - 30032202 116905308 MODEL JAAIVD010000025;XM_032908195 XP_032764086 protein FAM174C protein-coding 625891655 LOC116893734 periodic tryptophan protein 1 homolog 2 16330550 16332037 - 116893734 MODEL JAAIVD010000001 pseudo 625891656 LOC116896005 non-POU domain-containing octamer-binding protein-like 3 172223905 172225330 - 116896005 MODEL JAAIVD010000012 pseudo 625891657 Rab11b RAB11B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); cellular response to acidic pH (ortholog); constitutive secretory pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); Neurodevelopmental Disorder with Ataxic Gait, Absent Speech, and Decreased Cortical White Matter (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); phagocytic vesicle (ortholog) 1 158664061 158677155 + 22301074;30032202 116907037 MODEL JAAIVD010000025;XM_032909987 XP_032765878 ras-related protein Rab-11B protein-coding 625891666 LOC116912123 uncharacterized protein C11orf98 homolog 11 75497935 75498469 - 116912123 MODEL JAAIVD010000006 pseudo 625891667 Ttf2 transcription termination factor 2 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); FOUND IN cytosol (ortholog) 3 57099156 57130097 + 22301074 116896464 MODEL JAAIVD010000012;XM_032897626 XP_032753517 protein-coding 625891694 Evc EvC ciliary complex subunit 1 INVOLVED IN cartilage development (ortholog); endochondral bone growth (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); nephronophthisis (ortholog); FOUND IN ciliary basal body (ortholog); ciliary membrane (ortholog); cilium (ortholog) 11 67820619 67859625 + 30032202 116912737 MODEL JAAIVD010000006;XM_032916879 XP_032772770 ellis-van Creveld syndrome protein protein-coding 625891719 Gas1 growth arrest specific 1 ENCODES a protein that exhibits oxysterol binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye development (ortholog); cell fate commitment (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH holoprosencephaly (ortholog); holoprosencephaly 1 (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 14 77944781 77947897 + 30032202 116883800 MODEL JAAIVD010000009;XM_032885046 XP_032740937 growth arrest-specific protein 1 protein-coding 625891724 LOC116897641 U2 spliceosomal RNA 3 80215190 80215369 + 116897641 MODEL JAAIVD010000012 pseudo 625891725 Psd3 pleckstrin and Sec7 domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Contracture (ortholog); high grade glioma (ortholog); FOUND IN cleavage furrow (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 13 21307663 21680782 + 22301074 116914274 MODEL JAAIVD010000008;XM_032918495;XM_032918497 XP_032774386;XP_032774388 PH and SEC7 domain-containing protein 3 protein-coding 625891748 LOC116889470 small Cajal body-specific RNA 13 X 102036695 102036933 + 116889470 MODEL JAAIVD010000014;XR_004386422 ncrna 625891751 Ciao2a cytosolic iron-sulfur assembly component 2A INVOLVED IN protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); nucleoplasm (ortholog) 8 60462052 60473124 + 116907655 MODEL JAAIVD010000027;XM_032910746 XP_032766637 protein-coding 625891760 LOC116911452 DNA damage-regulated autophagy modulator protein 2-like 10 27869167 27869966 + 116911452 MODEL JAAIVD010000005 pseudo 625891761 Eps8 EGFR pathway substrate 8, signaling adaptor ENCODES a protein that exhibits actin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 102 (ortholog); autosomal recessive nonsyndromic deafness 106 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); glutamatergic synapse (ortholog) 6 11895551 11959408 + 30032202 116903145 MODEL JAAIVD010000024;XM_032905509 XP_032761400 epidermal growth factor receptor kinase substrate 8;epidermal growth factor receptor pathway substrate 8 protein-coding 625891785 Prdm16 PR/SET domain 16 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH coronary artery disease (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1LL (ortholog); FOUND IN aggresome (ortholog); chromatin (ortholog); cytosol (ortholog) 1 6353851 6401982 + 22301074;30032202 116889986 MODEL JAAIVD010000025;XM_032890777 XP_032746668 histone-lysine N-methyltransferase PRDM16 protein-coding 625891803 Tsacc TSSK6 activating cochaperone ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); FOUND IN cytoplasm (ortholog) 3 65254865 65265934 + 22301074;30032202 116896696 MODEL JAAIVD010000012;XM_032898094;XM_032898096 XP_032753985;XP_032753987 TSSK6-activating co-chaperone protein protein-coding 625891815 Gramd2a GRAM domain containing 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN endoplasmic reticulum-plasma membrane tethering (ortholog); regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); organelle membrane contact site (ortholog); plasma membrane (ortholog) 8 53520400 53554839 + 30032202 116908185 MODEL JAAIVD010000027;XM_032911472 XP_032767363 GRAM domain-containing protein 2A protein-coding 625891830 Acox3 acyl-CoA oxidase 3, pristanoyl ENCODES a protein that exhibits fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA oxidase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN peroxisome (ortholog) 11 69463291 69491170 - 22301074;30032202 116912307 MODEL JAAIVD010000006;XM_032916321 XP_032772212 peroxisomal acyl-coenzyme A oxidase 3 protein-coding 625891851 LOC116894301 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 1 21723199 21724586 - 116894301 MODEL JAAIVD010000025 pseudo 625891852 LOC116889114 putative protein FAM90A26 X 113265913 113267381 - 116889114 MODEL JAAIVD010000014;XM_032890279 XP_032746170 protein-coding 625891856 LOC116904696 small nucleolar RNA SNORA48 6 74002994 74003137 - 116904696 MODEL JAAIVD010000024;XR_004388392 snorna 625891859 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 140906002 140906073 - 116895148 MODEL JAAIVD010000001 trna 625891860 LOC116887732 elongation factor 1-gamma-like 1 227159162 227160502 + 116887732 MODEL JAAIVD010000025 pseudo 625891861 LOC116898446 60S ribosomal protein L27a-like 4 96293320 96340761 + 116898446 MODEL JAAIVD010000003 pseudo 625891862 LOC116889081 uncharacterized LOC116889081 X 26767770 26770091 - 116889081 MODEL JAAIVD010000014 pseudo 625891863 LOC116909619 CTP synthase 1-like 9 7608079 7609858 + 22301074;30032202 116909619 MODEL JAAIVD010000002;XM_032913246 XP_032769137 protein-coding 625891867 LOC116887902 40S ribosomal protein S24-like 1 64326696 64327146 + 116887902 MODEL JAAIVD010000025 pseudo 625891868 LOC116911218 actin, cytoplasmic 2-like 10 40649371 40650668 + 30032202 116911218 MODEL JAAIVD010000005;XM_032915110 XP_032771001 protein-coding 625891873 Pla2g4d phospholipase A2 group IVD ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN glycerophospholipid catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 5 98404825 98425631 - 22301074;30032202 116900598 MODEL JAAIVD010000023;XM_032902314 XP_032758205 cytosolic phospholipase A2 delta protein-coding 625891896 LOC116887817 10 kDa heat shock protein, mitochondrial-like 1 60923826 60924134 + 22301074;30032202 116887817 MODEL JAAIVD010000025;XM_032889340 XP_032745231 protein-coding 625891899 Adgrf1 adhesion G protein-coupled receptor F1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); memory (ortholog); neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) 4 86512461 86544871 - 22301074;30032202 116898056 MODEL JAAIVD010000003;XM_032899453 XP_032755344 adhesion G-protein coupled receptor F1 protein-coding 625891915 LOC116887847 protein NYNRIN-like X 41248498 41250381 - 22301074 116887847 MODEL JAAIVD010000014;XM_032889353 XP_032745244 protein-coding 625891919 Stat3 signal transducer and activator of transcription 3 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); astrocyte differentiation (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; Interleukin-10 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 60177560 60203269 - 30032202 116908570 MODEL JAAIVD010000002;XM_032911775;XM_032911776;XM_032911777;XM_032911778 XP_032767666;XP_032767667;XP_032767668;XP_032767669 protein-coding 625891952 Alg6 ALG6 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ic (ortholog); cystic kidney disease (ortholog) 1 54764933 54805814 - 30032202 116899861 MODEL JAAIVD010000025;XM_032901782 XP_032757673 dolichyl pyrophosphate Man9GlcNAc2 alpha-1,3-glucosyltransferase protein-coding 625891971 LOC116909503 keratin-associated protein 4-12-like 9 54499472 54500014 - 22301074;30032202 116909503 MODEL JAAIVD010000002;XM_032913108 XP_032768999 protein-coding 625891974 LOC116907224 lysine-specific demethylase 4D-like 8 10243491 10244873 - 30032202 116907224 MODEL JAAIVD010000027;XM_032910188 XP_032766079 protein-coding 625891977 LOC116913670 60S ribosomal protein L29-like 12 37039375 37039914 + 116913670 MODEL JAAIVD010000007 pseudo 625891978 Slc24a5 solute carrier family 24 member 5 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion import (ortholog); monoatomic ion transmembrane transport (ortholog); negative regulation of melanin biosynthetic process (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); ocular albinism 1 (ortholog); oculocutaneous albinism type VI (ortholog); FOUND IN trans-Golgi network (ortholog) 5 103379389 103398899 + 22301074;30032202 116900966 MODEL JAAIVD010000023;XM_032902596 XP_032758487 sodium/potassium/calcium exchanger 5 protein-coding 625891990 KEG97_t02 tRNA-Val MT 1026 1093 + 64988236 trna 625891991 Abcb9 ATP binding cassette subfamily B member 9 ENCODES a protein that exhibits ABC-type oligopeptide transporter activity (ortholog); ABC-type peptide transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide metabolic process (ortholog); peptide transport (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 29767873 29801134 + 22301074;30032202 116885331 MODEL JAAIVD010000004;XM_032886596 XP_032742487 ATP-binding cassette sub-family B member 9 protein-coding 625892007 LOC116893930 glyceraldehyde-3-phosphate dehydrogenase-like 2 83632964 83633972 - 116893930 MODEL JAAIVD010000001 pseudo 625892008 LOC116893847 olfactory receptor 6C2-like 2 61210040 61211002 - 22301074;30032202 116893847 MODEL JAAIVD010000001;XM_032895567 XP_032751458 protein-coding 625892011 LOC116899990 complement C5-like 5 547565 568838 + 22301074 116899990 MODEL JAAIVD010000023;XM_032901800 XP_032757691 protein-coding 625892024 Mycbp2 MYC binding protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN branchiomotor neuron axon guidance (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 26 (ortholog); colon cancer (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 12 21376546 21608293 + 30032202 116914081 MODEL JAAIVD010000007;XM_032918386;XM_032918388;XM_032918389 XP_032774277;XP_032774279;XP_032774280 E3 ubiquitin-protein ligase MYCBP2 protein-coding 625892121 Slc31a1 solute carrier family 31 member 1 ENCODES a protein that exhibits copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to cisplatin (ortholog); copper ion import (ortholog); PARTICIPATES IN cisplatin drug pathway; cisplatin response pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Congenital Abnormalities (ortholog); Embryo Loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) 1 91140609 91169756 - 22301074;30032202 116901438 MODEL JAAIVD010000025;XM_032903361;XR_004387995 XP_032759252 high affinity copper uptake protein 1 protein-coding 625892133 Mettl14 methyltransferase 14, N6-adenosine-methyltransferase non-catalytic subunit ENCODES a protein that exhibits mRNA binding (ortholog); mRNA m(6)A methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN forebrain radial glial cell differentiation (ortholog); gliogenesis (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cardiomyopathy (ortholog); Cardiotoxicity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA N6-methyladenosine methyltransferase complex (ortholog) 3 36423754 36446619 + 30032202 116896290 MODEL JAAIVD010000012;XM_032897371 XP_032753262 N6-adenosine-methyltransferase non-catalytic subunit;methyltransferase 14, N6-adenosine-methyltransferase subunit;methyltransferase like 14 protein-coding 625892148 LOC116888971 60S ribosomal protein L19-like X 8602004 8611654 + 116888971 MODEL JAAIVD010000014 pseudo 625892149 LOC116893626 5-hydroxyisourate hydrolase 2 8655617 8658994 - 22301074;30032202 116893626 MODEL JAAIVD010000001;XM_032895340 XP_032751231 protein-coding 625892157 Mettl18 methyltransferase 18, RPL3 N3(tau)-histidine ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine monomethylation (ortholog); regulation of ribosome biogenesis (ortholog); regulation of rRNA processing (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleus (ortholog) 10 43221887 43224022 + 30032202 116911561 MODEL JAAIVD010000005;XM_032915551;XM_032915552 XP_032771442;XP_032771443 histidine protein methyltransferase 1 homolog;methyltransferase 18, RPL3 N3-histidine;methyltransferase like 18 protein-coding 625892165 Hnrnpr heterogeneous nuclear ribonucleoprotein R ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA destabilization (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND SKELETAL AND BRAIN ABNORMALITIES (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); dendrite (ortholog) 1 21891008 21923276 - 30032202 116894321 MODEL JAAIVD010000025;XM_032896019;XM_032896024;XM_032896029;XM_032896038;XM_032896046;XM_032896052 XP_032751910;XP_032751915;XP_032751920;XP_032751929;XP_032751937;XP_032751943 protein-coding 625892189 Flvcr2 FLVCR choline and putative heme transporter 2 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); choline transport (ortholog); endothelial tip cell fate specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); proliferative vasculopathy and hydranencephaly-hydrocephaly syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog); plasma membrane (ortholog) 7 99856705 99919372 + 22301074;30032202 116905302 MODEL JAAIVD010000026;XM_032908185 XP_032764076 FLVCR heme transporter 2;feline leukemia virus subgroup C receptor-related protein 2 protein-coding 625892203 Ifne interferon epsilon INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); natural killer cell activation (ortholog) 1 65194640 65195396 - 22301074;30032202 116887956 MODEL JAAIVD010000025;XM_032889405 XP_032745296 protein-coding 625892207 LOC116891105 interferon-induced protein with tetratricopeptide repeats 1-like 2 34170871 34263457 - 22301074;30032202 116891105 MODEL JAAIVD010000001;XM_032891818;XM_032891819;XR_004386816;XR_004386817 XP_032747709;XP_032747710 protein-coding 625892220 LOC116888253 vigilin-like X 80111962 80115716 + 30032202 116888253 MODEL JAAIVD010000014;XM_032889537 XP_032745428 protein-coding 625892223 LOC116902662 U6 spliceosomal RNA 5 110581383 110581489 + 116902662 MODEL JAAIVD010000023;XR_004388224 snrna 625892226 LOC116886696 haptoglobin 17 29294439 29300079 - 22301074;30032202 116886696 MODEL JAAIVD010000011;XM_032888194;XM_032888195 XP_032744085;XP_032744086 protein-coding 625892238 Mrps27 mitochondrial ribosomal protein S27 ENCODES a protein that exhibits rRNA binding (ortholog); tRNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); mitochondrial translation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 3 197162892 197231850 - 22301074;30032202 116897251 MODEL JAAIVD010000012;XM_032898981 XP_032754872 28S ribosomal protein S27, mitochondrial protein-coding 625892253 Slc41a2 solute carrier family 41 member 2 ENCODES a protein that exhibits inorganic cation transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); iron ion transport (ortholog); magnesium ion transport (ortholog); FOUND IN plasma membrane (ortholog) 1 165100970 165205746 + 22301074;30032202 116907545 MODEL JAAIVD010000025;XM_032910571;XM_032910577;XM_032910585 XP_032766462;XP_032766468;XP_032766476 protein-coding 625892274 LOC116897648 U2 spliceosomal RNA 3 186352233 186352315 + 116897648 MODEL JAAIVD010000012 pseudo 625892275 LOC116887945 uncharacterized LOC116887945 X 62550400 62553387 + 116887945 MODEL JAAIVD010000014 pseudo 625892276 Nsd3 nuclear receptor binding SET domain protein 3 ENCODES a protein that exhibits histone H3K27 dimethyltransferase activity (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K27 trimethyltransferase activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH myeloid leukemia (ortholog); NUT midline carcinoma (ortholog); FOUND IN nucleus (ortholog) 13 60778434 60890559 - 22301074;30032202 116915112 MODEL JAAIVD010000008;XM_032919542;XM_032919543;XM_032919544;XM_032919545;XM_032919546;XM_032919547 XP_032775433;XP_032775434;XP_032775435;XP_032775436;XP_032775437;XP_032775438 histone-lysine N-methyltransferase NSD3 protein-coding 625892318 LOC116897468 U7 small nuclear RNA 3 140233773 140233839 - 116897468 MODEL JAAIVD010000012 pseudo 625892319 Nfx1 nuclear transcription factor, X-box binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of MHC class II biosynthetic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein autoubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 117166828 117210894 - 22301074;30032202 116902510 MODEL JAAIVD010000025;XM_032905028 XP_032760919 transcriptional repressor NF-X1 protein-coding 625892339 LOC116906960 putative olfactory receptor 8G3 pseudogene 8 82670301 82671230 + 22301074;30032202 116906960 MODEL JAAIVD010000027;XM_032909881 XP_032765772 protein-coding 625892343 Slc33a1 solute carrier family 33 member 1 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA transmembrane transport (ortholog); ASSOCIATED WITH cataract (ortholog); Congenital Cataracts, Hearing Loss, and Neurodegeneration (ortholog); Developmental Disabilities (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 91276493 91298825 + 22301074;30032202 116896823 MODEL JAAIVD010000012;XM_032898301;XM_032898302 XP_032754192;XP_032754193 acetyl-coenzyme A transporter 1 protein-coding 625892355 LOC116914128 small nucleolar RNA SNORA17 12 66226511 66226643 + 116914128 MODEL JAAIVD010000007;XR_004389690 snorna 625892358 LOC116897616 small nucleolar RNA SNORA17 3 76759111 76759222 + 116897616 MODEL JAAIVD010000012 pseudo 625892359 Sema3c semaphorin 3C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); blood vessel remodeling (ortholog); cardiac endothelial to mesenchymal transition (ortholog); ASSOCIATED WITH High Myopia (ortholog); Persistent Truncus Arteriosus (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular space (ortholog) 6 147234052 147394229 + 30032202 116904159 MODEL JAAIVD010000024;XM_032907057 XP_032762948 semaphorin-3C protein-coding 625892380 Srxn1 sulfiredoxin 1 ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); INVOLVED IN response to oxidative stress (ortholog); FOUND IN cytosol (ortholog) 5 131461912 131467597 + 22301074;30032202 116902114 MODEL JAAIVD010000023;XM_032904427 XP_032760318 sulfiredoxin-1 protein-coding 625892386 LOC116883230 10 kDa heat shock protein, mitochondrial-like 14 56617218 56618137 + 116883230 MODEL JAAIVD010000009 pseudo 625892387 LOC116893199 olfactory receptor 488-like 2 106270019 106270976 - 22301074;30032202 116893199 MODEL JAAIVD010000001;XM_032895096 XP_032750987 protein-coding 625892390 LOC116887933 ferritin heavy chain-like X 61135836 61136483 + 22301074;30032202 116887933 MODEL JAAIVD010000014;XM_032889396 XP_032745287 protein-coding 625892393 LOC116905586 polypyrimidine tract-binding protein 1-like 7 2841697 2843311 + 116905586 MODEL JAAIVD010000026 pseudo 625892394 LOC116914928 uncharacterized LOC116914928 13 6407573 6410927 - 116914928 MODEL JAAIVD010000008;XM_032919357 XP_032775248 uncharacterized protein LOC116914928 protein-coding 625892400 LOC116897045 uncharacterized LOC116897045 3 148579343 148582445 + 116897045 MODEL JAAIVD010000012;XR_004387390 ncrna 625892405 LOC116890080 bcl-2-like protein 1 1 215933939 215934657 + 116890080 MODEL JAAIVD010000025 pseudo 625892406 LOC116902841 amiloride-sensitive amine oxidase [copper-containing]-like 6 92006556 92010338 - 22301074;30032202 116902841 MODEL JAAIVD010000024;XM_032905171 XP_032761062 protein-coding 625892415 LOC116893758 uncharacterized LOC116893758 2 28797612 28802609 + 116893758 MODEL JAAIVD010000001;XR_004387004 ncrna 625892420 Spata13 spermatogenesis associated 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); filopodium assembly (ortholog); lamellipodium assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); filopodium (ortholog) 12 63669310 63741227 - 22301074 116913495 MODEL JAAIVD010000007;XM_032917697 XP_032773588 spermatogenesis-associated protein 13 protein-coding 625892436 Cacna1c calcium voltage-gated channel subunit alpha1 C ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon development (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute stress disorder (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); basal pole of outer hair cell (ortholog) 6 27547831 28155928 + 22301074;30032202 116903345 MODEL JAAIVD010000024;XM_032905803;XM_032905804;XM_032905806 XP_032761694;XP_032761695;XP_032761697 voltage-dependent L-type calcium channel subunit alpha-1C protein-coding 625892493 LOC116911803 small nucleolar RNA SNORD113/SNORD114 family 10 61200560 61200639 - 116911803 MODEL JAAIVD010000005 pseudo 625892494 LOC116883631 high mobility group protein B1-like 14 53374224 53374849 - 116883631 MODEL JAAIVD010000009 pseudo 625892495 LOC116902705 importin subunit alpha-1-like 6 43126498 43128103 + 116902705 MODEL JAAIVD010000024 pseudo 625892496 Arhgef7 Rho guanine nucleotide exchange factor 7 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); gamma-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); Golgi organization (ortholog); hematopoietic progenitor cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); focal adhesion (ortholog) 13 72016421 72123101 - 22301074 116914803 MODEL JAAIVD010000008;XM_032919253;XM_032919254;XM_032919256;XM_032919257 XP_032775144;XP_032775145;XP_032775147;XP_032775148 protein-coding 625892529 Chga chromogranin A INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); mast cell activation (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); end stage renal disease (ortholog); hypertension (ortholog); FOUND IN chromaffin granule (ortholog); extracellular space (ortholog); neuronal dense core vesicle (ortholog) 7 113829207 113840466 + 2828116;30032202 116905358 MODEL JAAIVD010000026;X06832;XM_032908276 CAA29988;XP_032764167 chromogranin-A protein-coding 625892541 LOC116894186 olfactory receptor 477 2 106014720 106015652 + 22301074;30032202 116894186 MODEL JAAIVD010000001;XM_032895901 XP_032751792 protein-coding 625892544 Ctnna1 catenin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN apical junction assembly (ortholog); axon regeneration (ortholog); cellular response to indole-3-methanol (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); catenin complex (ortholog) 15 9099331 9228329 - 22301074;30032202 116884744 MODEL JAAIVD010000010;XM_032885963 XP_032741854 catenin alpha-1 protein-coding 625892566 Krtdap keratinocyte differentiation associated protein INVOLVED IN epidermis development (ortholog); FOUND IN extracellular space (ortholog); lamellar body (ortholog) 2 165224817 165227794 - 22301074;30032202 116894452 MODEL JAAIVD010000001;XM_032896157 XP_032752048 keratinocyte differentiation-associated protein protein-coding 625892576 LOC116904743 small nucleolar RNA SNORA17 6 42637066 42637196 - 116904743 MODEL JAAIVD010000024;XR_004388429 snorna 625892579 LOC116889944 olfactory receptor 6C74-like 1 161361640 161362572 + 22301074;30032202 116889944 MODEL JAAIVD010000025;XM_032890750 XP_032746641 protein-coding 625892582 LOC116885784 vomeronasal type-1 receptor 1-like 1 214829407 214830373 + 116885784 MODEL JAAIVD010000025 pseudo 625892583 Fgfr4 fibroblast growth factor receptor 4 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult respiratory distress syndrome (ortholog); cancer (ortholog); FOUND IN cell-cell junction (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 14 73480630 73495762 + 22301074;30032202 116883723 MODEL JAAIVD010000009;XM_032884948;XM_032884949;XM_032884950;XM_032884951;XM_032884952;XM_032884953 XP_032740839;XP_032740840;XP_032740841;XP_032740842;XP_032740843;XP_032740844 protein-coding 625892616 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60926497 60926568 - 116897691 MODEL JAAIVD010000012 trna 625892617 Cimap3 ciliary microtubule associated protein 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); kinesin binding (ortholog); INVOLVED IN cilium organization (ortholog); embryonic heart tube left/right pattern formation (ortholog); positive regulation of kinase activity (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 52115269 52121887 + 30032202 116896408 MODEL JAAIVD010000012;XM_032897552 XP_032753443 Pifo primary cilia formation;protein pitchfork protein-coding 625892627 Bag1 BAG cochaperone 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); phosphoprotein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of motor neuron apoptotic process (ortholog); neuron differentiation (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 117234366 117246964 + 22301074;30032202 116900677 MODEL JAAIVD010000025;XM_032902416 XP_032758307 BAG family molecular chaperone regulator 1 protein-coding 625892637 LOC116907157 ATP synthase F(0) complex subunit B1, mitochondrial-like 8 87704645 87705386 - 116907157 MODEL JAAIVD010000027 pseudo 625892638 LOC116895530 late cornified envelope protein 3D-like 3 120331748 120332824 + 22301074 116895530 MODEL JAAIVD010000012;XM_032896775 XP_032752666 protein-coding 625892644 Gmpr2 guanosine monophosphate reductase 2 ENCODES a protein that exhibits GMP reductase activity (ortholog); INVOLVED IN GMP metabolic process (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Stomach Neoplasms (ortholog) 12 69326153 69332886 - 22301074 116913115 MODEL JAAIVD010000007;XM_032917269;XM_032917270;XM_032917271;XM_032917272 XP_032773160;XP_032773161;XP_032773162;XP_032773163 GMP reductase 2 protein-coding 625892667 Tle7 TLE family member 7 17 29804755 29816372 + 22301074;30032202 116886104 MODEL JAAIVD010000011;XM_032887434 XP_032743325 transducin-like enhancer protein 7 protein-coding 625892679 Daam2 dishevelled associated activator of morphogenesis 2 INVOLVED IN determination of left/right symmetry (ortholog); dorsal spinal cord development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Nephrotic Syndrome Type 24 (ortholog); osteoporosis (ortholog) 4 80366269 80480704 + 22301074;30032202 116899062 MODEL JAAIVD010000003;XM_032900533 XP_032756424 disheveled-associated activator of morphogenesis 2 protein-coding 625892709 Heatr5b HEAT repeat containing 5B ASSOCIATED WITH Cerebellar Atrophy with Seizures and Variable Developmental Delay (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 7 14401742 14483118 + 30032202 116905903 MODEL JAAIVD010000026;XM_032908893 XP_032764784 HEAT repeat-containing protein 5B protein-coding 625892749 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 47656089 47656161 - 116895142 MODEL JAAIVD010000001 trna 625892750 Lrrc4 leucine rich repeat containing 4 INVOLVED IN excitatory synapse assembly (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic density protein 95 clustering (ortholog); FOUND IN dendritic spine (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) 6 110718403 110723004 + 22301074;30032202 116904024 MODEL JAAIVD010000024;XM_032906853 XP_032762744 leucine-rich repeat-containing protein 4 protein-coding 625892756 Them5 thioesterase superfamily member 5 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN long-chain fatty-acyl-CoA metabolic process (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 62826522 62831262 - 30032202 116895415 MODEL JAAIVD010000012;XM_032896698 XP_032752589 acyl-coenzyme A thioesterase THEM5 protein-coding 625892765 LOC116899800 U7 small nuclear RNA 4 96373398 96373456 - 116899800 MODEL JAAIVD010000003;XR_004387802 snrna 625892768 LOC116887642 mitochondrial fission regulator 1-like 18 15208809 15210152 + 116887642 MODEL JAAIVD010000013 pseudo 625892769 LOC116894086 olfactory receptor 52A1-like 2 103222931 103223885 + 116894086 MODEL JAAIVD010000001 pseudo 625892770 Tnks tankyrase ENCODES a protein that exhibits histone binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to nutrient (ortholog); negative regulation of maintenance of mitotic sister chromatid cohesion, telomeric (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 13 52062042 52201807 + 22301074;30032202 116914592 MODEL JAAIVD010000008;XM_032918953 XP_032774844 poly [ADP-ribose] polymerase tankyrase-1 protein-coding 625892801 Rasl11a RAS like family 11 member A INVOLVED IN positive regulation of transcription by RNA polymerase I (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN nucleolus (ortholog) 16 7040906 7046872 - 22301074 116885379 MODEL JAAIVD010000004;XM_032886656 XP_032742547 ras-like protein family member 11A protein-coding 625892810 Podxl2 podocalyxin like 2 INVOLVED IN leukocyte tethering or rolling (ortholog) 6 57458306 57490392 + 116903519 MODEL JAAIVD010000024;XM_032906126 XP_032762017 podocalyxin-like protein 2 protein-coding 625892822 Slc16a14 solute carrier family 16 member 14 4 157609832 157635812 - 22301074;30032202 116899577 MODEL JAAIVD010000003;XM_032901513;XM_032901514;XM_032901515;XM_032901516;XM_032901517 XP_032757404;XP_032757405;XP_032757406;XP_032757407;XP_032757408 monocarboxylate transporter 14 protein-coding 625892843 Rpain RPA interacting protein INVOLVED IN protein import into nucleus (ortholog); response to UV (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 9 50594363 50602289 + 30032202 116909123 MODEL JAAIVD010000002;XM_032912598 XP_032768489 RPA-interacting protein protein-coding 625892854 LOC116907225 uncharacterized LOC116907225 1 159727174 159771762 + 116907225 MODEL JAAIVD010000025 pseudo 625892855 Chuk component of inhibitor of nuclear factor kappa B kinase complex ENCODES a protein that exhibits IkappaB kinase activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); bacterial pneumonia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 43604916 43639986 - 22301074;30032202 116891206 MODEL JAAIVD010000001;XM_032892033;XM_032892034 XP_032747924;XP_032747925 inhibitor of nuclear factor kappa-B kinase subunit alpha protein-coding 625892883 LOC116899821 small nucleolar RNA SNORA41 4 137167092 137167223 + 116899821 MODEL JAAIVD010000003;XR_004387821 snorna 625892886 Szt2 SZT2 subunit of KICSTOR complex INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); central nervous system development (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); cryptorchidism (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN GATOR1 complex (ortholog); GATOR2 complex (ortholog); KICSTOR complex (ortholog) 1 38617662 38663765 + 30032202 116897825 MODEL JAAIVD010000025;XM_032899240 XP_032755131 KICSTOR complex protein SZT2 protein-coding 625892962 LOC116892758 vomeronasal type-2 receptor 116-like 2 182771807 182810975 + 22301074;30032202 116892758 MODEL JAAIVD010000001;XM_032894635;XM_032894636 XP_032750526;XP_032750527 protein-coding 625892973 Psmd2 proteasome 26S subunit ubiquitin receptor, non-ATPase 2 FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 4 5476680 5487449 + 22301074;30032202 116898700 MODEL JAAIVD010000003;XM_032899963 XP_032755854 26S proteasome non-ATPase regulatory subunit 2;proteasome 26S subunit, non-ATPase 2 protein-coding 625892998 Pmvk phosphomevalonate kinase ENCODES a protein that exhibits ATP binding (ortholog); phosphomevalonate kinase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH genetic disease (ortholog); porokeratosis (ortholog); Porokeratosis 1, Multiple Types (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) 3 64199570 64208856 - 22301074;30032202 116896637 MODEL JAAIVD010000012;XM_032897954 XP_032753845 protein-coding 625893007 LOC116906268 heterogeneous nuclear ribonucleoprotein A3-like 7 123238851 123240160 + 116906268 MODEL JAAIVD010000026 pseudo 625893008 LOC116897792 olfactory receptor 2L8-like 4 4459804 4460742 - 22301074 116897792 MODEL JAAIVD010000003;XM_032899212 XP_032755103 protein-coding 625893011 Bcorl1 BCL6 corepressor like 1 ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Developmental Disabilities (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) X 110004750 110071886 - 22301074;30032202 116888442 MODEL JAAIVD010000014;XM_032889718 XP_032745609 BCL-6 corepressor-like protein 1 protein-coding 625893030 Nbn nibrin ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); damaged DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst growth (ortholog); DNA damage checkpoint signaling (ortholog); DNA double-strand break processing (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenosine deaminase deficiency (ortholog); Alzheimer's disease (ortholog); FOUND IN BRCA1-C complex (ortholog); chromosome, telomeric region (ortholog); Golgi apparatus (ortholog) 1 127791546 127827688 - 22301074;30032202 116903161 MODEL JAAIVD010000025;XM_032905532 XP_032761423 protein-coding 625893050 LOC116912064 angiogenic factor with G patch and FHA domains 1-like 11 98551748 98561077 + 116912064 MODEL JAAIVD010000006;XM_032915926 XP_032771817 protein-coding 625893060 Itprid2 ITPR interacting domain containing 2 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH retinitis pigmentosa (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 5 56854028 56891289 + 22301074 116901563 MODEL JAAIVD010000023;XM_032903557;XM_032903558 XP_032759448;XP_032759449 protein ITPRID2 protein-coding 625893088 Cacng5 calcium voltage-gated channel auxiliary subunit gamma 5 INVOLVED IN regulation of AMPA receptor activity (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 9 71215310 71257693 + 22301074;30032202 116909965 MODEL JAAIVD010000002;XM_032913740 XP_032769631 voltage-dependent calcium channel gamma-5 subunit protein-coding 625893098 Pgr progesterone receptor ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); chromatin (ortholog) 8 5027781 5094179 - 22301074 116906665 MODEL JAAIVD010000027;XM_032909448 XP_032765339 protein-coding 625893110 Actr3b actin related protein 3B 6 154947465 155041685 + 30032202 116904228 MODEL JAAIVD010000024;XM_032907166;XM_032907167 XP_032763057;XP_032763058 actin-related protein 3B protein-coding 625893128 Slc30a7 solute carrier family 30 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc ion import into Golgi lumen (ortholog); zinc ion transport (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); Hypogonadism and Testicular Atrophy (ortholog); ZIEGLER-HUANG SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog) 3 43711590 43776278 + 22301074;30032202 116896338 MODEL JAAIVD010000012;XM_032897441 XP_032753332 zinc transporter 7 protein-coding 625893143 LOC116894966 U1 spliceosomal RNA 2 171163025 171163169 + 116894966 MODEL JAAIVD010000001 pseudo 625893144 C18H22orf15 chromosome 18 C22orf15 homolog 18 11507726 11509969 + 116887284 MODEL JAAIVD010000013;XM_032888864 XP_032744755 uncharacterized protein C22orf15 homolog protein-coding 625893154 LOC116894526 vomeronasal type-1 receptor 4-like 2 175361585 175362571 + 22301074;30032202 116894526 MODEL JAAIVD010000001;XM_032896225 XP_032752116 protein-coding 625893157 LOC116898966 biotin--protein ligase-like 4 50344894 50359627 + 30032202 116898966 MODEL JAAIVD010000003;XM_032900390;XM_032900391 XP_032756281;XP_032756282 protein-coding 625893168 Rtn4rl2 reticulon 4 receptor like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 5 62254211 62271286 - 22301074;30032202 116901591 MODEL JAAIVD010000023;XM_032903609;XM_032903610;XM_032903611;XM_032903612 XP_032759500;XP_032759501;XP_032759502;XP_032759503 reticulon-4 receptor-like 2 protein-coding 625893184 Pdcd6 programmed cell death 6 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to heat (ortholog); COPII vesicle coating (ortholog); FOUND IN COPII vesicle coat (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 2 203728410 203737616 - 22301074 116892920 MODEL JAAIVD010000001;XM_032894846;XM_032894847 XP_032750737;XP_032750738 programmed cell death protein 6 protein-coding 625893194 LOC116912003 eukaryotic translation initiation factor 4E type 2-like 11 53213416 53214585 + 116912003 MODEL JAAIVD010000006 pseudo 625893195 LOC116889402 uncharacterized LOC116889402 X 2896300 2918435 + 116889402 MODEL JAAIVD010000014;XR_004386380 ncrna 625893200 LOC116886125 uncharacterized LOC116886125 17 42193604 42206351 - 116886125 MODEL JAAIVD010000011;XR_004386090 ncrna 625893204 LOC116906155 acyl-coenzyme A thioesterase 1-like 7 98176429 98182133 - 30032202 116906155 MODEL JAAIVD010000026;XM_032909136 XP_032765027 protein-coding 625893211 LOC116894255 vomeronasal type-2 receptor 116-like 2 115357915 115380131 - 22301074;30032202 116894255 MODEL JAAIVD010000001;XM_032895961 XP_032751852 protein-coding 625893219 Ncaph2 non-SMC condensin II complex subunit H2 INVOLVED IN female meiosis chromosome separation (ortholog); female meiotic nuclear division (ortholog); meiotic chromosome condensation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); mitochondrial DNA depletion syndrome 8A (ortholog); FOUND IN cell junction (ortholog); chromosome (ortholog); condensed chromosome (ortholog) 1 258654274 258672016 + 30032202 116915091 MODEL JAAIVD010000025;XM_032919520;XM_032919527 XP_032775411;XP_032775418 condensin-2 complex subunit H2 protein-coding 625893245 Pyurf PIGY upstream open reading frame INVOLVED IN protein stabilization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) 6 83501879 83505491 - 116903734 MODEL JAAIVD010000024;XM_032906419 XP_032762310 PIGY upstream reading frame;protein preY, mitochondrial protein-coding 625893251 LOC116902816 vomeronasal type-1 receptor 100-like 6 84008116 84009033 - 22301074;30032202 116902816 MODEL JAAIVD010000024;XM_032905148 XP_032761039 protein-coding 625893254 LOC116900160 protein max-like 5 26067937 26068996 - 22301074;30032202 116900160 MODEL JAAIVD010000023;XM_032901925 XP_032757816 protein-coding 625893258 Hfe homeostatic iron regulator ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); co-receptor binding (ortholog); peptide antigen binding (ortholog); INVOLVED IN acute-phase response (ortholog); BMP signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Abdominal Pain (ortholog); Alcoholic Liver Diseases (ortholog); Alzheimer's disease (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cytoplasmic vesicle (ortholog) 14 42703538 42711091 - 30032202 116883585 MODEL JAAIVD010000009;XM_032884765 XP_032740656 hereditary hemochromatosis protein protein-coding 625893268 Morc4 MORC family CW-type zinc finger 4 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); ASSOCIATED WITH Macrocephaly (ortholog); FOUND IN nucleoplasm (ortholog) X 92205069 92253785 + 22301074;30032202 116888638 MODEL JAAIVD010000014;XM_032889931 XP_032745822 MORC family CW-type zinc finger protein 4 protein-coding 625893289 Adad1 adenosine deaminase domain containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN spermatid development (ortholog); FOUND IN male germ cell nucleus (ortholog) 3 116917033 116949712 - 22301074;30032202 116895519 MODEL JAAIVD010000012;XM_032896764;XM_032896765 XP_032752655;XP_032752656 adenosine deaminase domain-containing protein 1 protein-coding 625893310 Psme4 proteasome activator subunit 4 ENCODES a protein that exhibits peptidase activator activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); visceral heterotaxy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 98279674 98382992 + 30032202 116912450 MODEL JAAIVD010000006;XM_032916519 XP_032772410 proteasome activator complex subunit 4 protein-coding 625893361 LOC116883544 uncharacterized LOC116883544 14 31246068 31301814 + 116883544 MODEL JAAIVD010000009;XR_004385771 ncrna 625893366 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889703 MODEL JAAIVD010000052 trna 625893367 LOC116894308 myeloid cell surface antigen CD33-like 2 143426687 143435132 - 30032202 116894308 MODEL JAAIVD010000001;XM_032896004 XP_032751895 protein-coding 625893376 LOC116893488 zinc finger SWIM domain-containing protein 5-like 2 181885549 181914328 + 116893488 MODEL JAAIVD010000001 pseudo 625893377 LOC116894116 olfactory receptor 52N2-like 2 103693207 103694157 - 22301074 116894116 MODEL JAAIVD010000001;XM_032895834 XP_032751725 protein-coding 625893380 Rec114 REC114 meiotic recombination protein INVOLVED IN meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 10 (ortholog); FOUND IN chromosome (ortholog) 8 52520109 52612115 - 116906760 MODEL JAAIVD010000027;XM_032909597;XM_032909598;XM_032909599 XP_032765488;XP_032765489;XP_032765490 meiotic recombination protein REC114 protein-coding 625893396 LOC116894866 U6 spliceosomal RNA 2 78810345 78810447 + 116894866 MODEL JAAIVD010000001;XR_004387079 snrna 625893399 Thg1l tRNA-histidine guanylyltransferase 1 like ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); protein homotetramerization (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 28 (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); transferase complex (ortholog) 9 28673734 28682334 - 22301074;30032202 116909790 MODEL JAAIVD010000002;XM_032913485;XM_032913486 XP_032769376;XP_032769377 probable tRNA(His) guanylyltransferase protein-coding 625893412 Grsf1 G-rich RNA sequence binding factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); morphogenesis of embryonic epithelium (ortholog); positive regulation of mitochondrial RNA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 11 2141698 2158957 - 22301074;30032202 116912245 MODEL JAAIVD010000006;XM_032916224;XM_032916225;XM_032916227 XP_032772115;XP_032772116;XP_032772118 G-rich sequence factor 1 protein-coding 625893432 Rnf213 ring finger protein 213 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); defense response to bacterium (ortholog); lipid droplet formation (ortholog); ASSOCIATED WITH coarctation of the aorta (ortholog); epilepsy (ortholog); Moyamoya Disease 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 9 64534559 64631765 - 22301074;30032202 116908676 MODEL JAAIVD010000002;XM_032911975 XP_032767866 E3 ubiquitin-protein ligase RNF213 protein-coding 625893504 Arhgef38 Rho guanine nucleotide exchange factor 38 3 25707141 25820053 + 22301074 116896233 MODEL JAAIVD010000012;XM_032897295 XP_032753186 protein-coding 625893522 Epha8 EPH receptor A8 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH High Myopia (ortholog); FOUND IN neuron projection (ortholog); plasma membrane (ortholog) 1 21277321 21303026 + 22301074;30032202 116894195 MODEL JAAIVD010000025;XM_032895911 XP_032751802 ephrin type-A receptor 8 protein-coding 625893542 LOC116911597 40S ribosomal protein S15-like 10 21612673 21613063 - 116911597 MODEL JAAIVD010000005 pseudo 625893543 LOC116900662 bcl-2-like protein 12 5 126349051 126349792 - 116900662 MODEL JAAIVD010000023 pseudo 625893544 Prox1 prospero homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Neoplasm Metastasis (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 68195107 68244619 - 30032202 116911283 MODEL JAAIVD010000005;XM_032915190;XM_032915191 XP_032771081;XP_032771082 prospero homeobox protein 1 protein-coding 625893556 LOC116890356 U6 spliceosomal RNA 1 13205245 13205351 + 116890356 MODEL JAAIVD010000025;XR_004386575 snrna 625893559 Ccdc83 coiled-coil domain containing 83 2 110917566 110951562 + 116894232 MODEL JAAIVD010000001;XM_032895939 XP_032751830 coiled-coil domain-containing protein 83 protein-coding 625893573 Znf771 zinc finger protein 771 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 74633690 74644505 - 30032202 116891481 MODEL JAAIVD010000001;XM_032892582;XM_032892583 XP_032748473;XP_032748474 protein-coding 625893584 LOC116887400 olfactory receptor 12D3-like 18 10472104 10473069 + 22301074 116887400 MODEL JAAIVD010000013;XM_032888993 XP_032744884 protein-coding 625893587 Plscr3 phospholipid scramblase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); lead ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 49452439 49457183 + 22301074;30032202 116909399 MODEL JAAIVD010000002;XM_032912964;XM_032912965 XP_032768855;XP_032768856 protein-coding 625893602 Cttnbp2nl CTTNBP2 N-terminal like ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of transmembrane transport (ortholog); negative regulation of transporter activity (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); FAR/SIN/STRIPAK complex (ortholog) 3 53059202 53106113 + 116896421 MODEL JAAIVD010000012;XM_032897567 XP_032753458 CTTNBP2 N-terminal-like protein protein-coding 625893612 LOC116893318 uncharacterized LOC116893318 2 152398462 152412524 + 116893318 MODEL JAAIVD010000001 pseudo 625893613 Rbm8a RNA binding motif protein 8A ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); thrombocytopenia-absent radius syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); dendrite (ortholog); exon-exon junction complex (ortholog) 3 60674137 60677004 - 22301074;30032202 116896507 MODEL JAAIVD010000012;XM_032897686;XM_032897687 XP_032753577;XP_032753578 RNA-binding protein 8A protein-coding 625893627 LOC116915207 mitochondrial fission regulator 2-like 14 116856 117984 + 116915207 MODEL JAAIVD010000009 pseudo 625893628 LOC116898000 elongin-C-like 4 61373250 61373672 - 116898000 MODEL JAAIVD010000003 pseudo 625893629 Mapk8ip3 mitogen-activated protein kinase 8 interacting protein 3 ENCODES a protein that exhibits JUN kinase binding (ortholog); kinesin binding (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); axon development (ortholog); axon guidance (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell body (ortholog) 9 2178242 2217760 - 30032202 116909337 MODEL JAAIVD010000002;XM_032912881;XM_032912882;XM_032912883;XM_032912884;XM_032912885;XM_032912886;XM_032912887;XM_032912888 XP_032768772;XP_032768773;XP_032768774;XP_032768775;XP_032768776;XP_032768777;XP_032768778;XP_032768779 C-Jun-amino-terminal kinase-interacting protein 3 protein-coding 625893679 LOC116895391 protein SET-like 3 58005034 58006563 - 22301074;30032202 116895391 MODEL JAAIVD010000012;XM_032896681 XP_032752572 protein-coding 625893684 LOC116906058 nucleolar and spindle-associated protein 1-like 7 49538821 49542064 + 116906058 MODEL JAAIVD010000026 pseudo 625893685 Hcfc2 host cell factor C2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); immune response involved in response to exogenous dsRNA (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); MLL1 complex (ortholog) 1 165709742 165738782 - 22301074;30032202 116907633 MODEL JAAIVD010000025;XM_032910698 XP_032766589 host cell factor 2 protein-coding 625893703 Gem GTP binding protein overexpressed in skeletal muscle ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN chromosome organization (ortholog); metaphase chromosome alignment (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); midbody (ortholog); mitotic spindle (ortholog) 1 131851263 131862438 - 22301074;30032202 116903367 MODEL JAAIVD010000025;XM_032905855 XP_032761746 GTP-binding protein GEM protein-coding 625893712 Fdx2 ferredoxin 2 ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH mitochondrial myopathy (ortholog); Multiple mitochondrial dysfunctions syndrome 8 (ortholog); FOUND IN mitochondrion (ortholog) 8 17330246 17335181 - 22301074;30032202 116907468 MODEL JAAIVD010000027;XM_032910453 XP_032766344 ferredoxin-2, mitochondrial protein-coding 625893721 Zeb1 zinc finger E-box binding homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); cartilage development (ortholog); cellular response to amino acid stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Breast Neoplasms (ortholog); corneal dystrophy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 31958007 32114227 + 30032202 116883999 MODEL JAAIVD010000009;XM_032885232;XM_032885234;XM_032885235;XM_032885236 XP_032741123;XP_032741125;XP_032741126;XP_032741127 zinc finger E-box-binding homeobox 1 protein-coding 625893742 Psma8 proteasome 20S subunit alpha 8 INVOLVED IN meiotic cell cycle (ortholog); proteasomal protein catabolic process (ortholog); regulation of meiosis I (ortholog); FOUND IN nucleus (ortholog); spermatoproteasome complex (ortholog) 15 29030026 29066103 - 22301074;30032202 116884950 MODEL JAAIVD010000010;XM_032886155 XP_032742046 proteasome subunit alpha-type 8 protein-coding 625893749 Api5 apoptosis inhibitor 5 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 5 68577940 68601406 - 30032202 116901661 MODEL JAAIVD010000023;XM_032903775;XM_032903776 XP_032759666;XP_032759667 protein-coding 625893770 Aplp1 amyloid beta precursor like protein 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha-2B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN cellular response to norepinephrine stimulus (ortholog); cytosolic mRNA polyadenylation (ortholog); extracellular matrix organization (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); nucleoplasm (ortholog) 2 165556084 165566706 + 22301074;30032202 116892318 MODEL JAAIVD010000001;XM_032893941;XM_032893942 XP_032749832;XP_032749833 amyloid-like protein 1 protein-coding 625893793 LOC116894226 60S ribosomal protein L3-like 2 107653761 107655013 + 116894226 MODEL JAAIVD010000001 pseudo 625893794 Ttc23 tetratricopeptide repeat domain 23 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH orofaciodigital syndrome (ortholog); FOUND IN cilium (ortholog) 2 132611455 132698326 - 22301074 116891980 MODEL JAAIVD010000001;XM_032893423;XM_032893424;XM_032893425;XM_032893426;XM_032893427 XP_032749314;XP_032749315;XP_032749316;XP_032749317;XP_032749318 tetratricopeptide repeat protein 23 protein-coding 625893829 LOC116901981 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like 1 126702112 126703946 - 116901981 MODEL JAAIVD010000025 pseudo 625893830 LOC116897511 small nucleolar RNA SNORA2/SNORA34 family 3 140341569 140341691 + 116897511 MODEL JAAIVD010000012 pseudo 625893831 Dgat2 diacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oleic acid (ortholog); cholesterol homeostasis (ortholog); diacylglycerol biosynthetic process (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2A1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 97429411 97459929 - 30032202 116891718 MODEL JAAIVD010000001;XM_032893008 XP_032748899 protein-coding 625893843 LOC116903696 hairy/enhancer-of-split related with YRPW motif-like protein 6 6338157 6340137 + 116903696 MODEL JAAIVD010000024 pseudo 625893844 Ciao2b cytosolic iron-sulfur assembly component 2B INVOLVED IN chromosome segregation (ortholog); protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) 17 12909991 12911975 - 30032202 116886514 MODEL JAAIVD010000011;XM_032888025 XP_032743916 protein-coding 625893853 LOC116886011 small nucleolar RNA SNORA26 16 39140739 39140859 - 116886011 MODEL JAAIVD010000004;XR_004386080 snorna 625893856 Ptgr1 prostaglandin reductase 1 ENCODES a protein that exhibits 13-lipoxin reductase activity (ortholog); 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); 2-alkenal reductase (NADPH) activity (ortholog); INVOLVED IN leukotriene B4 metabolic process (ortholog); lipoxin A4 metabolic process (ortholog); negative regulation of positive chemotaxis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Liver Neoplasms (ortholog); hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 92455224 92471636 + 22301074;30032202 116901570 MODEL JAAIVD010000025;XM_032903569 XP_032759460 protein-coding 625893869 Col10a1 collagen type X alpha 1 chain INVOLVED IN bone development (ortholog); cartilage development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH degenerative disc disease (ortholog); lung adenocarcinoma (ortholog); lung metastasis (ortholog); FOUND IN cell cortex (ortholog); collagen trimer (ortholog); collagen type X trimer (ortholog) 18 36024866 36030519 - 22301074 116886848 MODEL JAAIVD010000013;XM_032888300 XP_032744191 collagen alpha-1(X) chain protein-coding 625893875 G6pc2 glucose-6-phosphatase catalytic subunit 2 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH type 1 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 46537055 46543944 + 22301074;30032202 116900830 MODEL JAAIVD010000023;XM_032902533 XP_032758424 glucose-6-phosphatase 2 protein-coding 625893883 Tlr5 toll like receptor 5 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); male gonad development (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); alcohol use disorder (ortholog); ankylosing spondylitis (ortholog); FOUND IN plasma membrane (ortholog) 10 61258393 61264086 + 22301074;30032202 116911353 MODEL JAAIVD010000005;XM_032915273 XP_032771164 toll-like receptor 5 protein-coding 625893889 Chgb chromogranin B ASSOCIATED WITH prostate cancer (ortholog); FOUND IN secretory granule (ortholog) 5 112487262 112500610 + 22301074;30032202 116902006 MODEL JAAIVD010000023;XM_032904271 XP_032760162 secretogranin-1 protein-coding 625893898 Churc1 churchill domain containing 1 7 90901382 90916168 + 22301074;30032202 116905190 MODEL JAAIVD010000026;XM_032907981 XP_032763872 protein Churchill protein-coding 625893906 LOC116887904 60S acidic ribosomal protein P1-like X 53220823 53221173 + 22301074;30032202 116887904 MODEL JAAIVD010000014;XM_032889378 XP_032745269 protein-coding 625893909 Mansc1 MANSC domain containing 1 6 14823384 14842045 + 116903174 MODEL JAAIVD010000024;XM_032905545 XP_032761436 MANSC domain-containing protein 1 protein-coding 625893917 Hnrnpdl heterogeneous nuclear ribonucleoprotein D like ENCODES a protein that exhibits double-stranded DNA binding (ortholog); poly(A) binding (ortholog); poly(G) binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy type 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 11 10280500 10286035 - 30032202 116912892 MODEL JAAIVD010000006;XM_032917148;XM_032917149;XM_032917150;XR_004389486;XR_004389487 XP_032773039;XP_032773040;XP_032773041 heterogeneous nuclear ribonucleoprotein D-like protein-coding 625893937 LOC116886935 heat shock cognate 71 kDa protein-like 18 23134908 23136806 + 116886935 MODEL JAAIVD010000013 pseudo 625893938 LOC116898943 Down syndrome cell adhesion molecule homolog 4 48016397 48078283 + 30032202 116898943 MODEL JAAIVD010000003;XM_032900360;XM_032900361 XP_032756251;XP_032756252 protein-coding 625893956 Pttg1ip2 PTTG1IP family member 2 6 137705477 137733730 - 30032202 116904472 MODEL JAAIVD010000024;XM_032907281 XP_032763172 uncharacterized protein LOC116904472 protein-coding 625893965 Ccn6 cellular communication network factor 6 INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH arthropathy (ortholog); breast metaplastic carcinoma (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog) 18 38960865 38969974 - 22301074;30032202 116886974 MODEL JAAIVD010000013;XM_032888465 XP_032744356 protein-coding 625893972 Morc1 MORC family CW-type zinc finger 1 INVOLVED IN behavioral fear response (ortholog); epigenetic programing of male pronucleus (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH melancholic depression (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleus (ortholog) 4 32991404 33164860 + 22301074;30032202 116897899 MODEL JAAIVD010000003;XM_032899303 XP_032755194 MORC family CW-type zinc finger protein 1 protein-coding 625894003 LOC116899931 U2 spliceosomal RNA 4 145805407 145805597 + 116899931 MODEL JAAIVD010000003;XR_004387899 snrna 625894006 LOC116900328 olfactory receptor 10AG1-like 5 64511008 64517382 + 22301074 116900328 MODEL JAAIVD010000023;XM_032902084;XM_032902085 XP_032757975;XP_032757976 protein-coding 625894014 LOC116912947 small nucleolar RNA SNORD58 11 7051636 7051701 + 116912947 MODEL JAAIVD010000006;XR_004389515 snorna 625894017 LOC116886641 optic atrophy 3 protein homolog 17 19541405 19541922 + 116886641 MODEL JAAIVD010000011 pseudo 625894018 LOC116895121 U4 spliceosomal RNA 2 84935383 84935466 - 116895121 MODEL JAAIVD010000001 pseudo 625894019 Eny2 ENY2 transcription and export complex 2 subunit ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN DUBm complex (ortholog); mitochondrion (ortholog); nuclear pore nuclear basket (ortholog) 1 218863462 218873133 + 22301074;30032202 116911172 MODEL JAAIVD010000025;XM_032915037;XM_032915044 XP_032770928;XP_032770935 transcription and mRNA export factor ENY2 protein-coding 625894031 Fermt3 FERM domain containing kindlin 3 ENCODES a protein that exhibits integrin binding (ortholog); lipid binding (ortholog); INVOLVED IN integrin activation (ortholog); integrin-mediated signaling pathway (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); blood platelet disease (ortholog); genetic disease (ortholog); FOUND IN podosome (ortholog) 2 778000 796608 + 22301074;30032202 116894806 MODEL JAAIVD010000001;XM_032896470;XM_032896471 XP_032752361;XP_032752362 fermitin family homolog 3;fermitin family member 3 protein-coding 625894054 Cdc42bpg CDC42 binding protein kinase gamma ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); FOUND IN cell leading edge (ortholog); centriolar satellite (ortholog); cytosol (ortholog) 2 1362195 1381405 - 22301074;30032202 116890664 MODEL JAAIVD010000001;XM_032891064;XM_032891065;XM_032891066;XM_032891067;XM_032891068;XM_032891069;XM_032891070 XP_032746955;XP_032746956;XP_032746957;XP_032746958;XP_032746959;XP_032746960;XP_032746961 serine/threonine-protein kinase MRCK gamma protein-coding 625894110 LOC116893714 olfactory receptor 5B3-like 2 13452514 13453449 + 22301074;30032202 116893714 MODEL JAAIVD010000001;XM_032895429 XP_032751320 protein-coding 625894114 LOC116900158 elongin-B-like 5 24905562 24905861 - 30032202 116900158 MODEL JAAIVD010000023;XM_032901924 XP_032757815 protein-coding 625894117 R3hdm1 R3H domain containing 1 10 7476107 7617486 - 22301074 116911088 MODEL JAAIVD010000005;XM_032914912;XM_032914913;XM_032914914;XM_032914915;XM_032914916;XM_032914917;XM_032914918 XP_032770803;XP_032770804;XP_032770805;XP_032770806;XP_032770807;XP_032770808;XP_032770809 R3H domain-containing protein 1 protein-coding 625894165 Tnrc6b trinucleotide repeat containing adaptor 6B INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog) 1 250473606 250680992 + 22301074;30032202 116913825 MODEL JAAIVD010000025;XM_032918140;XM_032918148;XM_032918150;XM_032918152;XM_032918155;XM_032918159;XM_032918161;XM_032918165 XP_032774031;XP_032774039;XP_032774041;XP_032774043;XP_032774046;XP_032774050;XP_032774052;XP_032774056 trinucleotide repeat-containing gene 6B protein protein-coding 625894209 LOC116892759 olfactory receptor 10A3-like 2 182582116 182583116 + 22301074 116892759 MODEL JAAIVD010000001;XM_032894637 XP_032750528 protein-coding 625894212 LOC116905975 ESF1 homolog 7 22849115 22852154 + 22301074;30032202 116905975 MODEL JAAIVD010000026;XM_032908986 XP_032764877 protein-coding 625894218 Bivm basic, immunoglobulin-like variable motif containing 4 120178521 120214113 + 30032202 116899350 MODEL JAAIVD010000003;XM_032901045;XM_032901046;XM_032901048;XM_032901049;XM_032901050;XM_032901051;XM_032901052;XM_032901053 XP_032756936;XP_032756937;XP_032756939;XP_032756940;XP_032756941;XP_032756942;XP_032756943;XP_032756944 basic immunoglobulin-like variable motif-containing protein protein-coding 625894248 Nptn neuroplastin ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); transmembrane transporter binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); hypertension (ortholog); Myocardial Ischemia (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 8 52453984 52520245 + 30032202 116906759 MODEL JAAIVD010000027;XM_032909593;XM_032909594;XM_032909595;XM_032909596 XP_032765484;XP_032765485;XP_032765486;XP_032765487 protein-coding 625894275 LOC116888621 nuclear RNA export factor 2-like X 87242427 87262750 - 22301074;30032202 116888621 MODEL JAAIVD010000014;XM_032889918 XP_032745809 protein-coding 625894300 Mrpl37 mitochondrial ribosomal protein L37 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 1 47746935 47757384 + 22301074;30032202 116899325 MODEL JAAIVD010000025;XM_032901017 XP_032756908 39S ribosomal protein L37, mitochondrial protein-coding 625894311 LOC116905667 40S ribosomal protein S20-like 7 47264054 47264459 - 22301074;30032202 116905667 MODEL JAAIVD010000026;XM_032908651 XP_032764542 protein-coding 625894315 Vmp1 vacuole membrane protein 1 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); autophagy (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 9 84092708 84191417 + 30032202 116910421 MODEL JAAIVD010000002;XM_032914263;XM_032914264;XM_032914265 XP_032770154;XP_032770155;XP_032770156 protein-coding 625894337 LOC116900348 olfactory receptor 5W2-like 5 69031871 69039848 - 22301074;30032202 116900348 MODEL JAAIVD010000023;XM_032902101;XM_032902102 XP_032757992;XP_032757993 protein-coding 625894344 LOC116886963 double homeobox protein 4-like protein 4 18 34540080 34541298 + 22301074 116886963 MODEL JAAIVD010000013;XM_032888458 XP_032744349 protein-coding 625894348 Prdm8 PR/SET domain 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN central nervous system projection neuron axonogenesis (ortholog); corpus callosum morphogenesis (ortholog); corticospinal tract morphogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); progressive myoclonus epilepsy (ortholog); progressive myoclonus epilepsy 10 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 8432999 8453046 + 22301074;30032202 116912531 MODEL JAAIVD010000006;XM_032916632;XM_032916633;XM_032916634;XM_032916635 XP_032772523;XP_032772524;XP_032772525;XP_032772526 PR domain zinc finger protein 8 protein-coding 625894365 Rab3d RAB3D, member RAS oncogene family ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); myosin V binding (ortholog); INVOLVED IN bone resorption (ortholog); positive regulation of regulated secretory pathway (ortholog); regulation of exocytosis (ortholog); FOUND IN cytoplasmic microtubule (ortholog); secretory vesicle (ortholog); zymogen granule (ortholog) 8 18159866 18169589 - 22301074;30032202 116906572 MODEL JAAIVD010000027;XM_032909291;XM_032909292 XP_032765182;XP_032765183 ras-related protein Rab-3D protein-coding 625894378 Ak7 adenylate kinase 7 ENCODES a protein that exhibits AMP kinase activity (ortholog); dCMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 27 (ortholog); FOUND IN cytosol (ortholog) 7 123365779 123433946 + 22301074;30032202 116905442 MODEL JAAIVD010000026;XM_032908386 XP_032764277 protein-coding 625894400 Gvqw3 GVQW motif containing 3 2 96976421 96977803 - 116893954 MODEL JAAIVD010000001;XM_032895671 XP_032751562 protein GVQW3 protein-coding 625894405 Phf2 PHD finger protein 2 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); histone H3K9 demethylase activity (ortholog); histone H4K20 demethylase activity (ortholog); INVOLVED IN negative regulation of rDNA heterochromatin formation (ortholog); protein demethylation (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN kinetochore (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 14 67788461 67856785 - 30032202 116883363 MODEL JAAIVD010000009;XM_032884451 XP_032740342 lysine-specific demethylase PHF2 protein-coding 625894431 LOC116885250 oogenesin-3-like 16 43302100 43302657 + 30032202 116885250 MODEL JAAIVD010000004;XM_032886490 XP_032742381 protein-coding 625894434 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41805643 41805714 - 116884168 MODEL JAAIVD010000009 trna 625894435 LOC116885208 uncharacterized LOC116885208 16 16815720 16817460 + 116885208 MODEL JAAIVD010000004;XR_004385995 ncrna 625894440 Ino80c INO80 complex subunit C INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytosol (ortholog); fibrillar center (ortholog); Ino80 complex (ortholog) 15 19732596 19747361 + 30032202 116884617 MODEL JAAIVD010000010;XM_032885758 XP_032741649 protein-coding 625894449 Pih1d1 PIH1 domain containing 1 ENCODES a protein that exhibits ATPase binding (ortholog); histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); chromatin remodeling (ortholog); epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 2 154382218 154387788 - 30032202 116892164 MODEL JAAIVD010000001;XM_032893660;XM_032893661 XP_032749551;XP_032749552 PIH1 domain-containing protein 1 protein-coding 625894466 Wnt6 Wnt family member 6 INVOLVED IN axis specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); epithelial-mesenchymal cell signaling (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) 4 148194880 148208083 + 22301074;30032202 116898228 MODEL JAAIVD010000003;XM_032899583 XP_032755474 protein Wnt-6 protein-coding 625894474 Mdm2 MDM2 proto-oncogene ENCODES a protein that exhibits 5S rRNA binding (ortholog); disordered domain specific binding (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); apoptotic process (ortholog); atrial septum development (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute myeloid leukemia (ortholog); biliary tract benign neoplasm (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 195794363 195816889 - 22301074;30032202 116909305 MODEL JAAIVD010000025;XM_032912848 XP_032768739 E3 ubiquitin-protein ligase Mdm2 protein-coding 625894490 Lrrc17 leucine rich repeat containing 17 INVOLVED IN bone marrow development (ortholog); negative regulation of osteoclast differentiation (ortholog); osteoblast differentiation (ortholog); FOUND IN extracellular space (ortholog) 6 150842165 150855900 + 22301074 116904174 MODEL JAAIVD010000024;XM_032907077 XP_032762968 leucine-rich repeat-containing protein 17 protein-coding 625894497 Btaf1 B-TFIID TATA-box binding protein associated factor 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) 2 36808989 36894926 - 22301074;30032202 116891134 MODEL JAAIVD010000001;XM_032891868 XP_032747759 TATA-binding protein-associated factor 172 protein-coding 625894539 LOC116886762 5S ribosomal RNA 17 43138212 43138330 - 116886762 MODEL JAAIVD010000011;XR_004386163 rrna 625894542 Pgap4 post-GPI attachment to proteins GalNAc transferase 4 ENCODES a protein that exhibits glycosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); FOUND IN Golgi membrane (ortholog) 7 57296478 57310830 + 30032202 116904999 MODEL JAAIVD010000026;XM_032907682 XP_032763573 transmembrane protein 246 protein-coding 625894548 Crisp2 cysteine rich secretory protein 2 INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH megacolon (ortholog) 4 95079917 95104297 + 22301074;30032202 116898090 MODEL JAAIVD010000003;XM_032899476 XP_032755367 cysteine-rich secretory protein 2 protein-coding 625894562 LOC116908964 olfactory receptor 1468-like 9 44652770 44653705 - 22301074;30032202 116908964 MODEL JAAIVD010000002;XM_032912425 XP_032768316 protein-coding 625894565 LOC116890396 U6 spliceosomal RNA 1 266278995 266279098 + 116890396 MODEL JAAIVD010000025;XR_004386599 snrna 625894568 LOC116895253 serine protease inhibitor Kazal-type 6 3 226200 237969 + 22301074 116895253 MODEL JAAIVD010000012;XM_032896571 XP_032752462 protein-coding 625894575 LOC116914229 beta-defensin 15 13 65003961 65006602 - 22301074 116914229 MODEL JAAIVD010000008;XM_032918424 XP_032774315 protein-coding 625894579 LOC116894955 small nucleolar RNA SNORD101 2 209857861 209857934 - 116894955 MODEL JAAIVD010000001;XR_004387149 snorna 625894582 LOC116890065 vomeronasal type-1 receptor 4-like 1 214709467 214710435 - 22301074;30032202 116890065 MODEL JAAIVD010000025;XM_032890830 XP_032746721 protein-coding 625894586 LOC116893425 vomeronasal type-1 receptor 4-like 2 175150218 175151077 - 116893425 MODEL JAAIVD010000001 pseudo 625894587 LOC116907966 uncharacterized LOC116907966 8 112458974 112466854 + 116907966 MODEL JAAIVD010000027;XR_004388858 ncrna 625894591 Zfr zinc finger RNA binding protein ASSOCIATED WITH hereditary spastic paraplegia (ortholog); intellectual disability (ortholog); Neoplasm Invasiveness (ortholog) 3 168911447 168973913 - 22301074;30032202 116897119 MODEL JAAIVD010000012;XM_032898764;XM_032898766;XM_032898767;XM_032898768;XM_032898769;XR_004387399 XP_032754655;XP_032754657;XP_032754658;XP_032754659;XP_032754660 zinc finger RNA-binding protein protein-coding 625894625 Oprm1 opioid receptor mu 1 ENCODES a protein that exhibits beta-endorphin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); amphetamine abuse (ortholog); FOUND IN dendrite (ortholog); dendrite cytoplasm (ortholog); dendrite membrane (ortholog) 2 196129277 196205035 - 22301074;30032202 116892871 MODEL JAAIVD010000001;XM_032894776;XM_032894777;XM_032894778;XM_032894779 XP_032750667;XP_032750668;XP_032750669;XP_032750670 mu-type opioid receptor protein-coding 625894646 LOC116892856 uncharacterized LOC116892856 2 192759148 192769252 - 116892856 MODEL JAAIVD010000001;XR_004386979 ncrna 625894653 LOC116884530 60S ribosomal protein L27a-like 15 27825030 27825529 + 22301074;30032202 116884530 MODEL JAAIVD010000010;XM_032885665 XP_032741556 protein-coding 625894658 Tars2 threonyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); protein homodimerization activity (ortholog); threonine-tRNA ligase activity (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 21 (ortholog); Failure to Thrive (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 3 61522992 61538848 + 22301074;30032202 116896538 MODEL JAAIVD010000012;XM_032897724;XM_032897725 XP_032753615;XP_032753616 threonine--tRNA ligase, mitochondrial protein-coding 625894681 LOC116906249 immunoglobulin heavy variable 3-73-like 7 122296616 122297179 - 116906249 MODEL JAAIVD010000026 pseudo 625894682 Znf23 zinc finger protein 23 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) 17 29785785 29799336 + 30032202 116886115 MODEL JAAIVD010000011;XM_032887450;XM_032887451;XM_032887452;XM_032887453 XP_032743341;XP_032743342;XP_032743343;XP_032743344 protein-coding 625894700 Iqce IQ motif containing E INVOLVED IN limb morphogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to motile cilium (ortholog); ASSOCIATED WITH brachydactyly (ortholog); genetic disease (ortholog); Postaxial Polydactyly, Type A1 (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) 16 12502475 12541255 + 22301074 116885474 MODEL JAAIVD010000004;XM_032886755;XM_032886756;XM_032886757;XM_032886758;XM_032886759;XM_032886760;XM_032886761 XP_032742646;XP_032742647;XP_032742648;XP_032742649;XP_032742650;XP_032742651;XP_032742652 IQ domain-containing protein E protein-coding 625894745 LOC116902718 cytochrome c oxidase subunit 7C, mitochondrial-like 6 24539133 24539371 + 116902718 MODEL JAAIVD010000024 pseudo 625894746 LOC116915143 small nucleolar RNA SNORA17 13 35267890 35267994 - 116915143 MODEL JAAIVD010000008 pseudo 625894747 Zdhhc20 zDHHC palmitoyltransferase 20 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN host-mediated activation of viral process (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); protein palmitoylation (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) 12 66938465 66995828 + 22301074 116914048 MODEL JAAIVD010000007;XM_032918326;XM_032918327;XM_032918328;XM_032918330 XP_032774217;XP_032774218;XP_032774219;XP_032774221 palmitoyltransferase ZDHHC20;zinc finger DHHC-type palmitoyltransferase 20 protein-coding 625894778 LOC116902487 U6 spliceosomal RNA 5 31027379 31027483 - 116902487 MODEL JAAIVD010000023;XR_004388103 snrna 625894781 LOC116903044 taste receptor type 2 member 106 6 16684089 16685012 + 22301074;30032202 116903044 MODEL JAAIVD010000024;XM_032905346 XP_032761237 protein-coding 625894784 LOC116899331 uncharacterized LOC116899331 4 118432403 118453463 + 116899331 MODEL JAAIVD010000003;XR_004387705 ncrna 625894790 Ccna1 cyclin A1 PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cyclin A1-CDK2 complex (ortholog); microtubule cytoskeleton (ortholog) 3 99337155 99383198 + 30032202 116896865 MODEL JAAIVD010000012;XM_032898387;XM_032898388;XM_032898389;XM_032898390;XM_032898391;XM_032898393;XM_032898394 XP_032754278;XP_032754279;XP_032754280;XP_032754281;XP_032754282;XP_032754284;XP_032754285 cyclin-A1 protein-coding 625894819 LOC116902960 zinc finger matrin-type protein 1-like 6 74312250 74313076 + 116902960 MODEL JAAIVD010000024;XM_032905285 XP_032761176 protein-coding 625894823 LOC116911481 olfactory receptor 10J1-like 10 52305916 52306848 + 22301074 116911481 MODEL JAAIVD010000005;XM_032915464 XP_032771355 protein-coding 625894826 LOC116913375 developmental pluripotency-associated protein 3-like 12 69177290 69177826 + 116913375 MODEL JAAIVD010000007 pseudo 625894827 Tmem200b transmembrane protein 200B 1 26330762 26333102 - 116895695 MODEL JAAIVD010000025;XM_032896896 XP_032752787 protein-coding 625894832 Kcnj14 potassium inwardly rectifying channel subfamily J member 14 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the chemical synapse; FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 2 153691728 153699793 + 22301074;30032202 116892123 MODEL JAAIVD010000001;XM_032893606 XP_032749497 ATP-sensitive inward rectifier potassium channel 14 protein-coding 625894839 Prrt4 proline rich transmembrane protein 4 ASSOCIATED WITH COVID-19 (ortholog) 6 110384228 110394624 + 116904021 MODEL JAAIVD010000024;XM_032906850;XM_032906851 XP_032762741;XP_032762742 proline-rich transmembrane protein 4 protein-coding 625894852 Nabp2 nucleic acid binding protein 2 ENCODES a protein that exhibits C-rich strand telomeric DNA binding (ortholog); DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 155871332 155878162 - 30032202 116906018 MODEL JAAIVD010000025;XM_032909072;XM_032909080;XM_032909090;XM_032909092;XM_032909095 XP_032764963;XP_032764971;XP_032764981;XP_032764983;XP_032764986 SOSS complex subunit B1 protein-coding 625894873 Vps39 VPS39 subunit of HOPS complex INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cerebellar ataxia (ortholog); schizophrenia (ortholog); FOUND IN AP-3 adaptor complex (ortholog); HOPS complex (ortholog); late endosome (ortholog) 5 98450919 98488966 - 22301074;30032202 116901832 MODEL JAAIVD010000023;XM_032903996;XM_032903997;XM_032903998 XP_032759887;XP_032759888;XP_032759889 vam6/Vps39-like protein protein-coding 625894906 Snx24 sorting nexin 24 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog) 15 78370034 78517179 - 30032202 116884293 MODEL JAAIVD010000010;XM_032885391;XM_032885392 XP_032741282;XP_032741283 sorting nexin-24 protein-coding 625894922 Aif1l allograft inflammatory factor 1 like ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH breast cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); focal adhesion (ortholog) 5 3667291 3691200 - 22301074;30032202 116901160 MODEL JAAIVD010000023;XM_032902804 XP_032758695 allograft inflammatory factor 1-like protein-coding 625894932 Capn5 calpain 5 INVOLVED IN granulosa cell differentiation (ortholog); luteinization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); synapse (ortholog) 2 96406687 96461594 - 22301074;30032202 116891709 MODEL JAAIVD010000001;XM_032892978;XM_032892980 XP_032748869;XP_032748871 calpain-5 protein-coding 625894952 Clpp caseinolytic mitochondrial matrix peptidase proteolytic subunit ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); proteolysis (ortholog); proteolysis involved in protein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Perrault syndrome (ortholog); Perrault Syndrome 1 (ortholog); FOUND IN endopeptidase Clp complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 88371228 88377067 + 22301074;30032202 116899203 MODEL JAAIVD010000003;XM_032900792 XP_032756683 ATP-dependent Clp protease proteolytic subunit, mitochondrial protein-coding 625894962 Lsg1 large 60S subunit nuclear export GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN nuclear export (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 15492735 15515733 - 22301074;30032202 116898749 MODEL JAAIVD010000003;XM_032900067 XP_032755958 large subunit GTPase 1 homolog protein-coding 625894980 Dnajc17 DnaJ heat shock protein family (Hsp40) member C17 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 97350849 97384438 - 22301074;30032202 116901802 MODEL JAAIVD010000023;XM_032903961 XP_032759852 dnaJ homolog subfamily C member 17 protein-coding 625894996 Gpr173 G protein-coupled receptor 173 ENCODES a protein that exhibits gonadotropin-releasing hormone receptor activity (ortholog); INVOLVED IN negative regulation of neuron migration (ortholog) X 13489911 13494016 - 22301074;30032202 116888344 MODEL JAAIVD010000014;XM_032889615 XP_032745506 probable G-protein coupled receptor 173 protein-coding 625895002 LOC116914950 ral guanine nucleotide dissociation stimulator-like 13 11629057 11630630 - 116914950 MODEL JAAIVD010000008;XM_032919369 XP_032775260 protein-coding 625895007 LOC116886881 60S ribosomal protein L36-like 18 4606149 4606467 + 116886881 MODEL JAAIVD010000013 pseudo 625895008 LOC116913175 phosphate carrier protein, mitochondrial-like 12 56362224 56363543 - 116913175 MODEL JAAIVD010000007 pseudo 625895009 LOC116893052 glutathione S-transferase P 1-like 2 32755627 32756259 - 116893052 MODEL JAAIVD010000001 pseudo 625895010 LOC116897952 olfactory receptor 5AC1-like 4 43135243 43136175 - 22301074;30032202 116897952 MODEL JAAIVD010000003;XM_032899351 XP_032755242 protein-coding 625895014 LOC116893672 olfactory receptor 4D11-like 2 12207208 12208143 - 22301074 116893672 MODEL JAAIVD010000001;XM_032895388 XP_032751279 protein-coding 625895017 LOC116899763 U6 spliceosomal RNA 4 112056420 112056526 - 116899763 MODEL JAAIVD010000003;XR_004387777 snrna 625895020 Zcchc8 zinc finger CCHC-type containing 8 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN co-transcriptional lncRNA 3' end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); dyskeratosis congenita (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) 16 30133494 30155309 + 22301074;30032202 116885345 MODEL JAAIVD010000004;XM_032886620 XP_032742511 zinc finger CCHC domain-containing protein 8 protein-coding 625895038 Eif2a eukaryotic translation initiation factor 2A ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); tRNA binding (ortholog); INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway (ortholog); positive regulation of signal transduction (ortholog); regulation of translation (ortholog); PARTICIPATES IN ceramide signaling pathway; endoplasmic reticulum stress - the unfolded protein response pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH borna disease (ortholog); dystonia 33 (ortholog); Marinesco-Sjogren syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog) 3 97039009 97069906 + 22301074;30032202 116896851 MODEL JAAIVD010000012;XM_032898359;XM_032898360;XM_032898361 XP_032754250;XP_032754251;XP_032754252 protein-coding 625895063 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56681250 56681323 + 116910811 MODEL JAAIVD010000002 trna 625895064 Zcchc4 zinc finger CCHC-type containing 4 ENCODES a protein that exhibits rRNA (adenine-N6-)-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of translation (ortholog); rRNA methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 11 53329153 53369542 - 22301074;30032202 116912336 MODEL JAAIVD010000006;XM_032916381;XM_032916382;XM_032916383 XP_032772272;XP_032772273;XP_032772274 rRNA N6-adenosine-methyltransferase ZCCHC4 protein-coding 625895085 Sh3glb1 SH3 domain containing GRB2 like, endophilin B1 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); apoptotic process (ortholog); autophagic cell death (ortholog); PARTICIPATES IN mitochondria fission pathway; FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 16006364 16040244 + 22301074;30032202 116896187 MODEL JAAIVD010000012;XM_032897227;XM_032897228;XM_032897229;XM_032897230;XM_032897231;XM_032897232 XP_032753118;XP_032753119;XP_032753120;XP_032753121;XP_032753122;XP_032753123 endophilin-B1 protein-coding 625895117 LOC116887024 T-complex protein 1 subunit eta-like 1 32345565 32347152 - 116887024 MODEL JAAIVD010000025 pseudo 625895118 Vmac vimentin type intermediate filament associated coiled-coil protein FOUND IN type III intermediate filament (ortholog) 4 88088898 88091774 - 116899193 MODEL JAAIVD010000003;XM_032900777;XM_032900778 XP_032756668;XP_032756669 vimentin-type intermediate filament-associated coiled-coil protein protein-coding 625895127 Homer2 homer scaffold protein 2 ENCODES a protein that exhibits actin binding (ortholog); G protein-coupled glutamate receptor binding (ortholog); glutamate receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); calcium-mediated signaling (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 68 (ortholog); cocaine abuse (ortholog); cocaine dependence (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 118558297 118650671 + 22301074;30032202 116891900 MODEL JAAIVD010000001;XM_032893316;XM_032893317 XP_032749207;XP_032749208 homer protein homolog 2 protein-coding 625895144 Unk unk zinc finger ENCODES a protein that exhibits mRNA CDS binding (ortholog); ribosome binding (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); in utero embryonic development (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN cytoplasm (ortholog) 9 67997726 68029020 - 22301074;30032202 116909103 MODEL JAAIVD010000002;XM_032912577;XM_032912578 XP_032768468;XP_032768469 RING finger protein unkempt homolog protein-coding 625895168 LOC116909473 olfactory receptor 2T29-like 9 39514979 39515941 - 22301074 116909473 MODEL JAAIVD010000002;XM_032913063 XP_032768954 protein-coding 625895171 H1-1 H1.1 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); heparin binding (ortholog); INVOLVED IN positive regulation of receptor-mediated endocytosis (ortholog); spermatogenesis (ortholog); FOUND IN cell surface (ortholog); chromatin (ortholog); euchromatin (ortholog) 14 42758365 42759167 + 22301074 116883547 MODEL JAAIVD010000009;XM_032884718 XP_032740609 histone H1.1 protein-coding 625895176 Zpr1 ZPR1 zinc finger ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); translation initiation factor binding (ortholog); zinc ion binding (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); axon development (ortholog); Cajal body organization (ortholog); ASSOCIATED WITH GROWTH RESTRICTION, HYPOPLASTIC KIDNEYS, ALOPECIA, AND DISTINCTIVE FACIES (ortholog); FOUND IN axon (ortholog); Cajal body (ortholog); cytoplasm (ortholog) 8 40786391 40794433 + 22301074;30032202 116906798 MODEL JAAIVD010000027;XM_032909670;XM_032909671 XP_032765561;XP_032765562 zinc finger protein ZPR1 protein-coding 625895197 Xrra1 X-ray radiation resistance associated 1 INVOLVED IN response to X-ray (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 98137436 98202364 + 22301074;30032202 116891731 MODEL JAAIVD010000001;XM_032893028;XM_032893029;XM_032893030 XP_032748919;XP_032748920;XP_032748921 X-ray radiation resistance-associated protein 1 protein-coding 625895225 Kpna5 karyopherin subunit alpha 5 FOUND IN cytosol (ortholog) 18 28704925 28764811 + 22301074;30032202 116886880 MODEL JAAIVD010000013;XM_032888335;XM_032888336 XP_032744226;XP_032744227 importin subunit alpha-6 protein-coding 625895245 LOC116884148 small nucleolar RNA SNORA32 14 5705102 5705202 + 116884148 MODEL JAAIVD010000009 pseudo 625895246 LOC116884142 small nucleolar RNA SNORA67 14 48358200 48358341 - 116884142 MODEL JAAIVD010000009;XR_004385860 snorna 625895249 LOC116885981 U6 spliceosomal RNA 16 18063265 18063370 + 116885981 MODEL JAAIVD010000004;XR_004386060 snrna 625895252 LOC116897528 small nucleolar RNA SNORA48 3 121560029 121560154 + 116897528 MODEL JAAIVD010000012 pseudo 625895253 Grhpr glyoxylate and hydroxypyruvate reductase ENCODES a protein that exhibits carboxylic acid binding (ortholog); glyoxylate reductase (NADPH) activity (ortholog); hydroxypyruvate reductase (NADH) activity (ortholog); INVOLVED IN dicarboxylic acid metabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia (ortholog); nephrocalcinosis (ortholog); FOUND IN catalytic complex (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 1 1521819 1531256 - 22301074;30032202 116890849 MODEL JAAIVD010000025;XM_032891395;XM_032891406 XP_032747286;XP_032747297 glyoxylate reductase/hydroxypyruvate reductase protein-coding 625895269 Ttc21a tetratricopeptide repeat domain 21A INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); spermatogenic failure 37 (ortholog) 8 111177026 111211894 + 22301074;30032202 116907927 MODEL JAAIVD010000027;XM_032911140 XP_032767031 tetratricopeptide repeat protein 21A protein-coding 625895302 Tnk2 tyrosine kinase non receptor 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN phosphorylation (ortholog); positive regulation of peptidyl-tyrosine phosphorylation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Autosomal Recessive Infantile Epilepsy (ortholog); developmental and epileptic encephalopathy (ortholog); epilepsy (ortholog); FOUND IN axon (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) 4 17456551 17476637 + 22301074;30032202 116898779 MODEL JAAIVD010000003;XM_032900117 XP_032756008 activated CDC42 kinase 1 protein-coding 625895319 Pih1d2 PIH1 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog); FOUND IN protein folding chaperone complex (ortholog) 8 45089558 45097726 + 30032202 116906842 MODEL JAAIVD010000027;XM_032909730;XM_032909731;XM_032909733;XM_032909734 XP_032765621;XP_032765622;XP_032765624;XP_032765625 PIH1 domain-containing protein 2 protein-coding 625895338 Eqtn equatorin INVOLVED IN acrosomal vesicle exocytosis (ortholog); endocytosis (ortholog); establishment of localization in cell (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); early endosome (ortholog) 1 57885733 57898278 - 22301074;30032202 116900093 MODEL JAAIVD010000025;XM_032901875 XP_032757766 protein-coding 625895350 LOC116910739 small nucleolar RNA U13 9 39860352 39860456 + 116910739 MODEL JAAIVD010000002;XR_004389253 snorna 625895353 LOC116883886 uncharacterized LOC116883886 14 22614255 22616297 - 116883886 MODEL JAAIVD010000009;XR_004385802 ncrna 625895357 Abcc9 ATP binding cassette subfamily C member 9 ENCODES a protein that exhibits ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN action potential (ortholog); ATP metabolic process (ortholog); blood circulation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); breast ductal carcinoma (ortholog); Brugada syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); inward rectifying potassium channel (ortholog) 6 340885 455653 - 22301074;30032202 116903069 MODEL JAAIVD010000024;XM_032905368 XP_032761259 ATP-binding cassette sub-family C member 9 protein-coding 625895400 LOC116907944 interstitial collagenase B-like 8 3652551 3660811 - 22301074;30032202 116907944 MODEL JAAIVD010000027;XM_032911164 XP_032767055 protein-coding 625895412 Nbeal2 neurobeachin like 2 INVOLVED IN blood coagulation (ortholog); megakaryocyte development (ortholog); platelet alpha granule organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); gray platelet syndrome (ortholog); hemorrhagic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 101208696 101238772 - 30032202 116907676 MODEL JAAIVD010000027;XM_032910771 XP_032766662 neurobeachin-like protein 2 protein-coding 625895470 Gria2 glutamate ionotropic receptor AMPA type subunit 2 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to amine stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic rhinitis (ortholog); amphetamine abuse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); axon (ortholog) 3 72735221 72850794 + 22301074;30032202 116896756 MODEL JAAIVD010000012;XM_032898200;XM_032898201;XM_032898202 XP_032754091;XP_032754092;XP_032754093 glutamate receptor 2 protein-coding 625895498 Lysmd1 LysM domain containing 1 FOUND IN nucleoplasm (ortholog) 3 62107970 62115794 - 116896567 MODEL JAAIVD010000012;XM_032897776;XR_004387344 XP_032753667 lysM and putative peptidoglycan-binding domain-containing protein 1 protein-coding 625895508 Nrg3 neuregulin 3 ENCODES a protein that exhibits chemorepellent activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN chemorepulsion involved in interneuron migration from the subpallium to the cortex (ortholog); ERBB4 signaling pathway (ortholog); ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); schizophrenia (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 13 16891916 17972351 - 30032202 116914966 MODEL JAAIVD010000008;XM_032919377 XP_032775268 pro-neuregulin-3, membrane-bound isoform protein-coding 625895522 Enkd1 enkurin domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); motile cilium assembly (ortholog); non-motile cilium assembly (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centriole (ortholog); centrosome (ortholog) 17 25438066 25442444 - 30032202 116886058 MODEL JAAIVD010000011;XM_032887361;XM_032887362;XM_032887363 XP_032743252;XP_032743253;XP_032743254 enkurin domain-containing protein 1 protein-coding 625895540 Sema3f semaphorin 3F ENCODES a protein that exhibits chemorepellent activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); Hearing Loss (ortholog); hypogonadotropic hypogonadism (ortholog); FOUND IN glutamatergic synapse (ortholog) 8 99002083 99029590 - 30032202 116907542 MODEL JAAIVD010000027;XM_032910563 XP_032766454 semaphorin-3F protein-coding 625895564 LOC116914491 zinc finger protein 20-like 13 12010255 12030758 - 30032202 116914491 MODEL JAAIVD010000008;XM_032918803 XP_032774694 protein-coding 625895572 LOC116891714 tubulin alpha-1C chain-like 2 96813947 96815170 + 116891714 MODEL JAAIVD010000001 pseudo 625895573 LOC116893285 E3 ubiquitin/ISG15 ligase TRIM25-like 2 147855083 147991430 + 116893285 MODEL JAAIVD010000001 pseudo 625895574 LOC116893300 mas-related G-protein coupled receptor member B3-like 2 151155670 151156635 + 22301074;30032202 116893300 MODEL JAAIVD010000001;XM_032895128 XP_032751019 protein-coding 625895577 LOC116909433 olfactory receptor 56 9 31784263 31788294 + 22301074 116909433 MODEL JAAIVD010000002;XM_032913008 XP_032768899 protein-coding 625895583 Lvrn laeverin 15 40119006 40186903 - 22301074;30032202 116884556 MODEL JAAIVD010000010;XM_032885696 XP_032741587 aminopeptidase Q protein-coding 625895606 LOC116902519 U7 small nuclear RNA 5 75844015 75844079 + 116902519 MODEL JAAIVD010000023;XR_004388128 snrna 625895609 Ptpn22 protein tyrosine phosphatase non-receptor type 22 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH Addison's disease (ortholog); alopecia areata (ortholog); Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); nucleus (ortholog) 3 54165175 54214052 - 30032202 116896440 MODEL JAAIVD010000012;XM_032897593 XP_032753484 tyrosine-protein phosphatase non-receptor type 22 protein-coding 625895634 Hectd1 HECT domain E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN aorta development (ortholog); embryonic placenta development (ortholog); heart valve development (ortholog); ASSOCIATED WITH intellectual disability (ortholog) 7 65174787 65263222 - 22301074;30032202 116905037 MODEL JAAIVD010000026;XM_032907719 XP_032763610 E3 ubiquitin-protein ligase HECTD1 protein-coding 625895681 LOC116902776 protein lin-28 homolog A-like 6 75510259 75510887 + 116902776 MODEL JAAIVD010000024 pseudo 625895682 LOC116905911 uncharacterized LOC116905911 7 127048190 127052542 - 116905911 MODEL JAAIVD010000026;XR_004388576 ncrna 625895686 Znf35 zinc finger protein 35 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 8 114055402 114065746 + 30032202 116908008 MODEL JAAIVD010000027;XM_032911266 XP_032767157 protein-coding 625895694 Ice1 interactor of little elongation complex ELL subunit 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of intracellular protein transport (ortholog); positive regulation of protein-containing complex assembly (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN Cajal body (ortholog); euchromatin (ortholog); histone locus body (ortholog) 2 201973514 202015485 - 116892910 MODEL JAAIVD010000001;XM_032894832 XP_032750723 little elongation complex subunit 1 protein-coding 625895717 Wsb2 WD repeat and SOCS box containing 2 16 36451239 36471951 - 22301074 116885224 MODEL JAAIVD010000004;XM_032886460;XM_032886461 XP_032742351;XP_032742352 WD repeat and SOCS box-containing protein 2 protein-coding 625895733 Anxa2 annexin A2 ENCODES a protein that exhibits bone sialoprotein binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); body fluid secretion (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN AnxA2-p11 complex (ortholog); basolateral plasma membrane (ortholog); cell cortex (ortholog) 8 63798317 63834514 + 22301074;30032202 116907096 MODEL JAAIVD010000027;XM_032910064 XP_032765955 protein-coding 625895750 LOC116906129 pecanex-like protein 4 7 86819766 86831489 + 116906129 MODEL JAAIVD010000026;XM_032909124 XP_032765015 protein-coding 625895757 Dnal4 dynein axonemal light chain 4 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH mirror movements 3 (ortholog) 18 19970476 19970793 - 22301074;30032202 116887240 MODEL JAAIVD010000013;XM_032888803 XP_032744694 dynein light chain 4, axonemal protein-coding 625895760 Ppie peptidylprolyl isomerase E ENCODES a protein that exhibits mRNA binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); poly(A) binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of viral genome replication (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nuclear speck (ortholog) 1 35117560 35129427 + 22301074;30032202 116897101 MODEL JAAIVD010000025;XM_032898747;XM_032898753;XM_032898757;XM_032898765;XM_032898774 XP_032754638;XP_032754644;XP_032754648;XP_032754656;XP_032754665 peptidyl-prolyl cis-trans isomerase E protein-coding 625895787 LOC116908626 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like 9 34993940 34994397 - 116908626 MODEL JAAIVD010000002 pseudo 625895788 Aen apoptosis enhancing nuclease ENCODES a protein that exhibits DNA exonuclease activity (ortholog); exonuclease activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 121345053 121351765 - 22301074;30032202 116891951 MODEL JAAIVD010000001;XM_032893391 XP_032749282 apoptosis-enhancing nuclease protein-coding 625895795 LOC116888721 histidine triad nucleotide-binding protein 1-like X 100504917 100505296 + 116888721 MODEL JAAIVD010000014 pseudo 625895796 Spats1 spermatogenesis associated serine rich 1 4 84417333 84442453 + 116899137 MODEL JAAIVD010000003;XM_032900672;XM_032900673 XP_032756563;XP_032756564 spermatogenesis-associated serine-rich protein 1 protein-coding 625895808 Paqr5 progestin and adipoQ receptor family member 5 8 56257478 56329395 - 22301074;30032202 116907456 MODEL JAAIVD010000027;XM_032910440 XP_032766331 membrane progestin receptor gamma protein-coding 625895820 Znf488 zinc finger protein 488 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); oligodendrocyte development (ortholog); positive regulation of myelination (ortholog); FOUND IN nucleus (ortholog) 13 9740911 9750173 - 30032202 116914568 MODEL JAAIVD010000008;XM_032918924 XP_032774815 protein-coding 625895826 LOC116895034 small nucleolar RNA SNORA17 2 19326384 19326518 + 116895034 MODEL JAAIVD010000001;XR_004387220 snorna 625895829 Mmp11 matrix metallopeptidase 11 ENCODES a protein that exhibits metallopeptidase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); collagen catabolic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); Spontaneous Abortions (ortholog); FOUND IN extracellular matrix (ortholog) 18 11515084 11524020 + 22301074;30032202 116886819 MODEL JAAIVD010000013;XM_032888247 XP_032744138 stromelysin-3 protein-coding 625895841 Hpd 4-hydroxyphenylpyruvate dioxygenase ENCODES a protein that exhibits 4-hydroxyphenylpyruvate dioxygenase activity (ortholog); iron ion binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN L-tyrosine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 16 30640405 30651138 + 22301074;30032202 116885374 MODEL JAAIVD010000004;XM_032886649 XP_032742540 protein-coding 625895856 LOC116888080 egl nine homolog 1-like X 90561801 90563498 - 116888080 MODEL JAAIVD010000014;XR_004386290 pseudo 625895859 LOC116884382 60S ribosomal protein L30-like 15 54082154 54088497 + 116884382 MODEL JAAIVD010000010 pseudo 625895860 LOC116893433 vomeronasal type-1 receptor 4-like 2 175838420 175841087 - 22301074;30032202 116893433 MODEL JAAIVD010000001;XM_032895205 XP_032751096 protein-coding 625895866 LOC116894402 keratin-associated protein 6-2 2 157332656 157333027 - 30032202 116894402 MODEL JAAIVD010000001;XM_032896109 XP_032752000 protein-coding 625895869 LOC116888791 uncharacterized LOC116888791 X 103431292 103438008 - 22301074 116888791 MODEL JAAIVD010000014;XM_032890071 XP_032745962 uncharacterized protein LOC116888791 protein-coding 625895879 LOC116913982 olfactory receptor 4N4 12 72950633 72951559 + 22301074 116913982 MODEL JAAIVD010000007;XM_032918260 XP_032774151 protein-coding 625895882 Klk15 kallikrein related peptidase 15 2 155310636 155317580 - 22301074 116894352 MODEL JAAIVD010000001;XM_032896051 XP_032751942 kallikrein-15 protein-coding 625895889 Chodl chondrolectin ENCODES a protein that exhibits hyaluronic acid binding (ortholog); INVOLVED IN regulation of neuron projection development (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 62971099 62992935 - 30032202 116898003 MODEL JAAIVD010000003;XM_032899399 XP_032755290 protein-coding 625895899 Nipsnap1 nipsnap homolog 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); sensory perception of pain (ortholog); FOUND IN membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 11 73848626 73871618 + 30032202 116912355 MODEL JAAIVD010000006;XM_032916411 XP_032772302 protein NipSnap homolog 1 protein-coding 625895913 Trmu tRNA mitochondrial 2-thiouridylase ASSOCIATED WITH aminoglycoside-induced deafness (ortholog); genetic disease (ortholog); infantile liver failure syndrome (ortholog); FOUND IN mitochondrion (ortholog) 1 255226650 255243151 + 22301074;30032202 116914727 MODEL JAAIVD010000025;XM_032919161;XM_032919173;XM_032919179;XM_032919189;XR_004389765 XP_032775052;XP_032775064;XP_032775070;XP_032775080 mitochondrial tRNA-specific 2-thiouridylase 1;tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase protein-coding 625895940 LOC116894045 olfactory receptor 52K1 2 102557836 102558780 + 22301074 116894045 MODEL JAAIVD010000001;XM_032895765 XP_032751656 protein-coding 625895943 LOC116887757 U6 spliceosomal RNA 18 33098445 33098549 + 116887757 MODEL JAAIVD010000013;XR_004386257 snrna 625895946 Foxi2 forkhead box I2 2 66507144 66508789 - 30032202 116893874 MODEL JAAIVD010000001;XM_032895597 XP_032751488 forkhead box protein I2 protein-coding 625895950 LOC116912010 H/ACA ribonucleoprotein complex subunit DKC1-like 11 57315286 57340713 - 116912010 MODEL JAAIVD010000006 pseudo 625895951 LOC116899773 U6 spliceosomal RNA 4 39876336 39876438 - 116899773 MODEL JAAIVD010000003;XR_004387786 snrna 625895954 Znf475 zinc finger protein 475 15 79073640 79107569 - 116884627 MODEL JAAIVD010000010;XM_032885766;XM_032885768 XP_032741657;XP_032741659 zinc finger protein 474 protein-coding 625895966 LOC116911995 PRAME family member 20-like 11 48634593 48638162 + 30032202 116911995 MODEL JAAIVD010000006;XM_032915901 XP_032771792 protein-coding 625895971 LOC116892761 formyl peptide receptor-related sequence 3-like 2 182428278 182429248 - 30032202 116892761 MODEL JAAIVD010000001;XM_032894639 XP_032750530 protein-coding 625895974 LOC116888325 60S ribosomal protein L13-like 1 85918323 85918995 + 116888325 MODEL JAAIVD010000025 pseudo 625895975 Fam170b family with sequence similarity 170 member B INVOLVED IN positive regulation of acrosome reaction (ortholog); regulation of fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); outer acrosomal membrane (ortholog) 13 8556478 8559236 + 30032202 116915075 MODEL JAAIVD010000008;XM_032919493;XM_032919494 XP_032775384;XP_032775385 protein FAM170B protein-coding 625895984 B4galt5 beta-1,4-galactosyltransferase 5 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); glycosylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN Golgi apparatus (ortholog) 5 150638320 150688999 + 22301074;30032202 116902313 MODEL JAAIVD010000023;XM_032904759 XP_032760650 protein-coding 625895997 LOC116906173 7SK snRNA methylphosphate capping enzyme-like 7 105546187 105553669 + 116906173 MODEL JAAIVD010000026 pseudo 625895998 LOC116895612 aspartate aminotransferase, mitochondrial-like 3 169337840 169339114 + 22301074;30032202 116895612 MODEL JAAIVD010000012;XM_032896824 XP_032752715 protein-coding 625896001 Ttc27 tetratricopeptide repeat domain 27 ASSOCIATED WITH neuromuscular disease (ortholog) 7 18383333 18527675 - 22301074 116905927 MODEL JAAIVD010000026;XM_032908915 XP_032764806 tetratricopeptide repeat protein 27 protein-coding 625896025 LOC116889283 heterogeneous nuclear ribonucleoprotein A3-like X 101047448 101048514 + 116889283 MODEL JAAIVD010000014 pseudo 625896026 Mpl MPL proto-oncogene, thrombopoietin receptor ENCODES a protein that exhibits thrombopoietin receptor activity (ortholog); INVOLVED IN basophil homeostasis (ortholog); cellular response to hypoxia (ortholog); definitive hemopoiesis (ortholog); ASSOCIATED WITH Chronic Hepatitis B (ortholog); congenital amegakaryocytic thrombocytopenia (ortholog); congenital amegakaryocytic thrombocytopenia 1 (ortholog); FOUND IN cell surface (ortholog); Golgi apparatus (ortholog); neuronal cell body (ortholog) 1 38574436 38586475 + 22301074;30032202 116887313 MODEL JAAIVD010000025;XM_032888901;XM_032888910 XP_032744792;XP_032744801 thrombopoietin receptor protein-coding 625896042 Ddx23 DEAD-box helicase 23 ENCODES a protein that exhibits helicase activity (ortholog); INVOLVED IN R-loop processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH bilateral perisylvian polymicrogyria (ortholog); Failure to Thrive (ortholog); Fetal Growth Retardation (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); nucleolus (ortholog) 1 271471717 271488946 - 22301074;30032202 116884772 MODEL JAAIVD010000025;XM_032886001;XM_032886008 XP_032741892;XP_032741899 probable ATP-dependent RNA helicase DDX23 protein-coding 625896068 H6pd hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase ENCODES a protein that exhibits 6-phosphogluconolactonase activity (ortholog); carbohydrate binding (ortholog); glucose-6-phosphate dehydrogenase activity (ortholog); INVOLVED IN NADP+ metabolic process (ortholog); pentose-phosphate shunt (ortholog); pentose-phosphate shunt, oxidative branch (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cortisone reductase deficiency (ortholog); cortisone reductase deficiency 1 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); sarcoplasmic reticulum (ortholog) 1 10762497 10780403 + 22301074;30032202 116892529 MODEL JAAIVD010000025;XM_032894291 XP_032750182 GDH/6PGL endoplasmic bifunctional protein protein-coding 625896076 Firrm FIGNL1 interacting regulator of recombination and mitosis ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN chromosome segregation (ortholog); interstrand cross-link repair (ortholog); mitotic cell cycle (ortholog); FOUND IN chromosome, centromeric region (ortholog); kinetochore (ortholog); midbody (ortholog) 10 43171693 43221780 - 116910983 MODEL JAAIVD010000005;XM_032914696 XP_032770587 C10H1orf112 chromosome 10 C1orf112 homolog;uncharacterized protein C1orf112 homolog protein-coding 625896104 LOC116897967 histidine-rich protein PFHRP-II-like 4 21454806 21460697 + 116897967 MODEL JAAIVD010000003;XM_032899367 XP_032755258 protein-coding 625896109 LOC116898970 uncharacterized LOC116898970 4 50531072 50536038 + 116898970 MODEL JAAIVD010000003;XR_004387677 ncrna 625896113 LOC116913281 egl nine homolog 1-like 12 87519540 87534810 + 116913281 MODEL JAAIVD010000007 pseudo 625896114 LOC116906223 Ig heavy chain V region 441-like 7 121657595 121665042 - 116906223 MODEL JAAIVD010000026 pseudo 625896115 LOC116895514 60S ribosomal protein L26-like 3 116142957 116151281 - 116895514 MODEL JAAIVD010000012 pseudo 625896116 LOC116905810 disintegrin and metalloproteinase domain-containing protein 21 7 95748583 95751102 - 22301074;30032202 116905810 MODEL JAAIVD010000026;XM_032908778 XP_032764669 protein-coding 625896121 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 32314657 32314728 + 116890651 MODEL JAAIVD010000025 trna 625896122 Mgat4a alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase A ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,3-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN N-glycan processing (ortholog); protein glycosylation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); pancreatic cancer (ortholog) 4 113641554 113730812 - 30032202 116899298 MODEL JAAIVD010000003;XM_032900948;XM_032900949;XM_032900950;XM_032900951 XP_032756839;XP_032756840;XP_032756841;XP_032756842 protein-coding 625896149 LOC116913158 glutamine synthetase-like 12 45025235 45030706 + 116913158 MODEL JAAIVD010000007 pseudo 625896150 LOC116888556 uncharacterized LOC116888556 X 67115756 67117382 - 116888556 MODEL JAAIVD010000014;XR_004386321 ncrna 625896154 Anapc7 anaphase promoting complex subunit 7 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); brain development (ortholog); protein branched polyubiquitination (ortholog); ASSOCIATED WITH FERGUSON-BONNI NEURODEVELOPMENTAL SYNDROME (ortholog); syndromic intellectual disability (ortholog); FOUND IN anaphase-promoting complex (ortholog); heterochromatin (ortholog); intercellular bridge (ortholog) 16 31408561 31436085 - 22301074;30032202 116885364 MODEL JAAIVD010000004;XM_032886637 XP_032742528 anaphase-promoting complex subunit 7 protein-coding 625896169 LOC116893449 nucleosome assembly protein 1-like 1 2 177748002 177762353 + 116893449 MODEL JAAIVD010000001 pseudo 625896170 LOC116907335 polyadenylate-binding protein 1-like 1 162758351 162760468 - 30032202 116907335 MODEL JAAIVD010000025;XM_032910277 XP_032766168 protein-coding 625896174 LOC116907555 olfactory receptor 149 8 82514791 82515726 - 22301074 116907555 MODEL JAAIVD010000027;XM_032910578 XP_032766469 protein-coding 625896177 Slc17a2 solute carrier family 17 member 2 ENCODES a protein that exhibits urate transmembrane transporter activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); liver cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog) 14 42791889 42803363 + 22301074;30032202 116883595 MODEL JAAIVD010000009;XM_032884774;XM_032884775 XP_032740665;XP_032740666 sodium-dependent phosphate transport protein 3 protein-coding 625896194 Slitrk3 SLIT and NTRK like family member 3 INVOLVED IN axonogenesis (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); neurotransmitter-gated ion channel clustering (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); postsynaptic density membrane (ortholog) 3 83134328 83146789 + 22301074;30032202 116896785 MODEL JAAIVD010000012;XM_032898249;XM_032898250;XM_032898251 XP_032754140;XP_032754141;XP_032754142 SLIT and NTRK-like protein 3 protein-coding 625896206 Pip4p2 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN negative regulation of phagocytosis (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) 1 128875142 128923017 - 22301074;30032202 116903217 MODEL JAAIVD010000025;XM_032905596 XP_032761487 type 2 phosphatidylinositol 4,5-bisphosphate 4-phosphatase protein-coding 625896217 Prss53 serine protease 53 2 74013949 74020178 + 22301074;30032202 116891454 MODEL JAAIVD010000001;XM_032892526;XR_004386836 XP_032748417 protein-coding 625896236 Poglut2 protein O-glucosyltransferase 2 ENCODES a protein that exhibits UDP-glucosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum lumen (ortholog); nucleoplasm (ortholog) 4 120166162 120178446 - 22301074;30032202 116899348 MODEL JAAIVD010000003;XM_032901043 XP_032756934 protein-coding 625896250 Pon3 paraoxonase 3 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); arylesterase activity (ortholog); dihydrocoumarin hydrolase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); coumarin catabolic process (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); atherosclerosis (ortholog); FOUND IN extracellular space (ortholog) 6 133336590 133363374 + 22301074;30032202 116904099 MODEL JAAIVD010000024;XM_032906968 XP_032762859 serum paraoxonase/lactonase 3 protein-coding 625896263 LOC116905889 ribosome production factor 2 homolog 7 121571378 121572296 + 116905889 MODEL JAAIVD010000026 pseudo 625896264 LOC116915149 U6atac minor spliceosomal RNA 13 30585000 30585120 + 116915149 MODEL JAAIVD010000008;XR_004389818 snrna 625896267 LOC116896377 glutathione S-transferase Mu 6 3 50316105 50320078 + 22301074;30032202 116896377 MODEL JAAIVD010000012;XM_032897500 XP_032753391 protein-coding 625896277 Hspa13 heat shock protein family A (Hsp70) member 13 4 66217686 66231842 + 22301074;30032202 116899051 MODEL JAAIVD010000003;XM_032900523 XP_032756414 heat shock 70 kDa protein 13 protein-coding 625896286 LOC116902958 LYR motif-containing protein 4-like 6 124527756 124528982 - 116902958 MODEL JAAIVD010000024 pseudo 625896287 LOC116886339 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like 17 1649126 1650116 + 116886339 MODEL JAAIVD010000011 pseudo 625896288 Tob1 transducer of ERBB2, 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); SMAD binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of nuclear-transcribed mRNA poly(A) tail shortening (ortholog); ASSOCIATED WITH Chloracne (ortholog); endometriosis (ortholog); Experimental Neoplasms (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog) 9 51321679 51325486 - 30032202 116909214 MODEL JAAIVD010000002;XM_032912716 XP_032768607 protein Tob1 protein-coding 625896294 LOC116893908 uncharacterized LOC116893908 2 76572108 76574495 - 116893908 MODEL JAAIVD010000001;XM_032895634 XP_032751525 uncharacterized protein LOC116893908 protein-coding 625896299 LOC116885973 U1 spliceosomal RNA 16 18854939 18855096 + 116885973 MODEL JAAIVD010000004;XR_004386054 snrna 625896302 LOC116902703 ras GTPase-activating protein-binding protein 1-like 6 42992954 42994461 + 116902703 MODEL JAAIVD010000024 pseudo 625896303 LOC116885583 uncharacterized LOC116885583 16 9408982 9410766 + 116885583 MODEL JAAIVD010000004;XR_004386025 ncrna 625896307 LOC116908433 U1 spliceosomal RNA 8 78738446 78738613 + 116908433 MODEL JAAIVD010000027;XR_004388963 snrna 625896310 LOC116904569 early activation antigen CD69-like 6 18307258 18315231 + 30032202 116904569 MODEL JAAIVD010000024;XM_032907368 XP_032763259 protein-coding 625896319 Kcnk18 potassium two pore domain channel subfamily K member 18 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); potassium ion export across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN plasma membrane (ortholog) 2 56878688 56892684 - 22301074;30032202 116893833 MODEL JAAIVD010000001;XM_032895549;XM_032895550 XP_032751440;XP_032751441 potassium channel subfamily K member 18 protein-coding 625896330 Ptbp2 polypyrimidine tract binding protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN cerebellum development (ortholog); mRNA splice site recognition (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN growth cone (ortholog); neuronal cell body (ortholog); spliceosomal complex (ortholog) 3 39994896 40056682 + 22301074;30032202 116896317 MODEL AJ010585;JAAIVD010000012;XM_032897409;XM_032897410;XM_032897411;XM_032897413 CAB54073;XP_032753300;XP_032753301;XP_032753302;XP_032753304 ptblp PTB-like protein;polypyrimidine tract-binding protein 2 protein-coding 625896355 Cnih3 cornichon family AMPA receptor auxiliary protein 3 ENCODES a protein that exhibits channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of AMPA receptor activity (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic shaft (ortholog); glutamatergic synapse (ortholog) 10 59702664 59809983 + 22301074;30032202 116911346 MODEL JAAIVD010000005;XM_032915262;XM_032915263 XP_032771153;XP_032771154 protein cornichon homolog 3 protein-coding 625896369 Tle2 TLE family member 2, transcriptional corepressor ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); FOUND IN focal adhesion (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 153300689 153316256 - 22301074;30032202 116904197 MODEL JAAIVD010000025;XM_032907113 XP_032763004 transducin-like enhancer protein 2 protein-coding 625896394 Tmem63a transmembrane protein 63A ENCODES a protein that exhibits mechanosensitive monoatomic ion channel activity (ortholog); osmolarity-sensing monoatomic cation channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN lysosome organization (ortholog); surfactant secretion (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 19 (ortholog); FOUND IN centriolar satellite (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) 10 59259920 59293765 + 22301074;30032202 116911311 MODEL JAAIVD010000005;XM_032915227 XP_032771118 CSC1-like protein 1 protein-coding 625896421 Desi2 desumoylating isopeptidase 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 10 56546922 56591376 + 30032202 116910995 MODEL JAAIVD010000005;XM_032914710;XR_004389291 XP_032770601 deubiquitinase DESI2 protein-coding 625896432 LOC116902544 small nucleolar RNA SNORA18 5 134862769 134862899 - 116902544 MODEL JAAIVD010000023;XR_004388145 snorna 625896435 Mcoln1 mucolipin TRP cation channel 1 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); autophagosome maturation (ortholog); calcium ion export (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Corneal Opacity (ortholog); fundus dystrophy (ortholog); FOUND IN Golgi apparatus (ortholog); intracellular vesicle (ortholog); late endosome (ortholog) 16 1430296 1444562 + 30032202 116885148 MODEL JAAIVD010000004;XM_032886352;XM_032886353;XM_032886354 XP_032742243;XP_032742244;XP_032742245 mucolipin 1;mucolipin-1 protein-coding 625896461 Gabrr1 gamma-aminobutyric acid type A receptor subunit rho1 ENCODES a protein that exhibits GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); intracellular vesicle (ortholog) 1 109874820 109912314 - 22301074;30032202 116888921 MODEL JAAIVD010000025;XM_032890169;XM_032890173;XM_032890175 XP_032746060;XP_032746064;XP_032746066 gamma-aminobutyric acid receptor subunit rho-1 protein-coding 625896480 LOC116914083 cytochrome c, somatic-like 12 21458355 21459194 - 116914083 MODEL JAAIVD010000007 pseudo 625896481 Hpgds hematopoietic prostaglandin D synthase ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); prostaglandin-D synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); negative regulation of male germ cell proliferation (ortholog); prostaglandin metabolic process (ortholog); PARTICIPATES IN prostaglandin biosynthetic pathway; prostanoid metabolic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Kidney Neoplasms (ortholog); liver disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 77693242 77716770 - 30032202 116903716 MODEL JAAIVD010000024;XM_032906392 XP_032762283 protein-coding 625896491 Chac2 ChaC glutathione specific gamma-glutamylcyclotransferase 2 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog) 11 98481449 98488964 - 22301074;30032202 116912510 MODEL JAAIVD010000006;XM_032916596;XM_032916597 XP_032772487;XP_032772488 glutathione-specific gamma-glutamylcyclotransferase 2 protein-coding 625896501 LOC116891164 GSK-3-binding protein FRAT2-like 2 40953733 40954855 - 30032202 116891164 MODEL JAAIVD010000001;XM_032891966 XP_032747857 protein-coding 625896506 LOC116906669 40S ribosomal protein S16-like 8 24731559 24732072 - 116906669 MODEL JAAIVD010000027 pseudo 625896507 Dnajc2 DnaJ heat shock protein family (Hsp40) member C2 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of cell growth (ortholog); negative regulation of DNA biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 6 151061973 151088111 - 30032202 116904180 MODEL JAAIVD010000024;XM_032907089 XP_032762980 dnaJ homolog subfamily C member 2 protein-coding 625896528 Nup160 nucleoporin 160 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH nephrotic syndrome type 19 (ortholog); osteopetrosis (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore (ortholog) 5 64861157 64915932 + 30032202 116901596 MODEL JAAIVD010000023;XM_032903621 XP_032759512 nuclear pore complex protein Nup160 protein-coding 625896568 LOC116884115 U6 spliceosomal RNA 14 64017179 64017284 + 116884115 MODEL JAAIVD010000009;XR_004385846 snrna 625896571 LOC116899806 small nucleolar RNA SNORA63 4 7900752 7900876 + 116899806 MODEL JAAIVD010000003;XR_004387808 snorna 625896574 LOC116904257 MICOS complex subunit Mic26-like 6 33092702 33096108 + 116904257 MODEL JAAIVD010000024 pseudo 625896575 LOC116910923 RNA-binding motif protein, Y chromosome, family 1 member A1-like 10 54693742 54699969 - 116910923 MODEL JAAIVD010000005 pseudo 625896576 LOC116883669 cathepsin L1-like 14 77368086 77371089 + 30032202 116883669 MODEL JAAIVD010000009;XM_032884866 XP_032740757 protein-coding 625896585 Pcdh8 protocadherin 8 INVOLVED IN chemical synaptic transmission (ortholog); modulation of chemical synaptic transmission (ortholog); morphogenesis of embryonic epithelium (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); Schaffer collateral - CA1 synapse (ortholog) 12 44560856 44565389 + 22301074 116913642 MODEL JAAIVD010000007;XM_032917910;XM_032917911 XP_032773801;XP_032773802 protocadherin-8 protein-coding 625896594 Rgp1 RGP1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); positive regulation of GTPase activity (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 1 2914190 2918487 - 30032202 116890993 MODEL JAAIVD010000025;XM_032891672 XP_032747563 RAB6A-GEF complex partner protein 2;RGP1 homolog, RAB6A GEF complex partner 1 protein-coding 625896607 LOC116895718 60S ribosomal protein L23a-like 3 221153724 221154477 + 116895718 MODEL JAAIVD010000012 pseudo 625896608 LOC116893607 40S ribosomal protein S10-like 2 4811150 4811644 + 30032202 116893607 MODEL JAAIVD010000001;XM_032895315 XP_032751206 protein-coding 625896611 LOC116894135 olfactory receptor 52E5 2 103989565 103990461 + 22301074 116894135 MODEL JAAIVD010000001;XM_032895853 XP_032751744 protein-coding 625896614 Fam228a family with sequence similarity 228 member A 7 25372336 25387645 - 116906284 MODEL JAAIVD010000026;XM_032909172 XP_032765063 protein FAM228A protein-coding 625896627 Fam98c family with sequence similarity 98 member C ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); autism spectrum disorder (ortholog) 2 166838318 166841883 + 30032202 116892363 MODEL JAAIVD010000001;XM_032894021;XR_004386946;XR_004386947 XP_032749912 protein FAM98C protein-coding 625896644 LOC116889276 39S ribosomal protein L30, mitochondrial-like 1 127838978 127839409 - 116889276 MODEL JAAIVD010000025 pseudo 625896645 Trappc6b trafficking protein particle complex subunit 6B ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with microcephaly, epilepsy, and brain atrophy (ortholog) 7 72339555 72350829 - 22301074;30032202 116905082 MODEL JAAIVD010000026;XM_032907789 XP_032763680 trafficking protein particle complex 6B protein-coding 625896655 LOC116899930 U1 spliceosomal RNA 4 3619701 3619856 + 116899930 MODEL JAAIVD010000003;XR_004387898 snrna 625896658 LOC116890154 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial-like 1 251721099 251721891 + 116890154 MODEL JAAIVD010000025;XM_032890887 XP_032746778 protein-coding 625896662 Clmp CXADR like cell adhesion molecule INVOLVED IN digestive tract development (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH genetic disease (ortholog); intestinal pseudo-obstruction (ortholog); short bowel syndrome (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic microtubule (ortholog); postsynaptic membrane (ortholog) 8 35282653 35385050 + 30032202 116908153 MODEL JAAIVD010000027;XM_032911456 XP_032767347 CXADR like membrane protein;CXADR-like membrane protein protein-coding 625896674 LOC116897254 histone deacetylase 1-like 3 197862755 197864698 + 116897254 MODEL JAAIVD010000012 pseudo 625896675 Anapc1 anaphase promoting complex subunit 1 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH High Myopia (ortholog); Rothmund-Thomson Syndrome Type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog) 5 107404352 107478545 - 30032202 116901949 MODEL JAAIVD010000023;XM_032904183 XP_032760074 anaphase-promoting complex subunit 1 protein-coding 625896727 LOC116908391 small nucleolar RNA SNORA17 8 88848825 88848953 - 116908391 MODEL JAAIVD010000027;XR_004388936 snorna 625896730 LOC116896084 adhesion G-protein coupled receptor V1-like 3 214972919 214987469 + 30032202 116896084 MODEL JAAIVD010000012;XM_032897062 XP_032752953 protein-coding 625896738 LOC116885347 uncharacterized LOC116885347 16 9743009 9744424 + 116885347 MODEL JAAIVD010000004;XR_004386005 ncrna 625896742 LOC116905139 uncharacterized LOC116905139 7 84659507 84671054 - 116905139 MODEL JAAIVD010000026;XR_004388489;XR_004388490;XR_004388491 ncrna 625896753 Snx27 sorting nexin 27 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH Disease Progression (ortholog); Dravet syndrome (ortholog); early myoclonic encephalopathy (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); glutamatergic synapse (ortholog) 3 62598174 62677132 + 22301074;30032202 116896583 MODEL JAAIVD010000012;XM_032897810;XM_032897811 XP_032753701;XP_032753702 sorting nexin-27 protein-coding 625896772 LOC116906484 small nucleolar RNA SNORA76 7 91312463 91312579 - 116906484 MODEL JAAIVD010000026;XR_004388727 snorna 625896775 Ccl20 C-C motif chemokine ligand 20 ENCODES a protein that exhibits CCR6 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN extracellular space (ortholog) 4 155953398 155955460 + 22301074;30032202 116898244 MODEL JAAIVD010000003;XM_032899593;XM_032899594 XP_032755484;XP_032755485 C-C motif chemokine 20 protein-coding 625896786 C1H1orf185 chromosome 1 C1orf185 homolog ASSOCIATED WITH atrial fibrillation (ortholog) 1 45299410 45339235 + 116890543 MODEL JAAIVD010000025;XM_032891013 XP_032746904 uncharacterized protein C1orf185 homolog protein-coding 625896795 LOC116904381 centrosomal protein of 170 kDa protein B-like 6 92034140 92037334 - 22301074 116904381 MODEL JAAIVD010000024;XM_032907251 XP_032763142 protein-coding 625896799 LOC116907134 60S ribosomal protein L34-like 8 39283647 39284947 + 116907134 MODEL JAAIVD010000027 pseudo 625896800 LOC116890584 small nucleolar RNA SNORA17 1 118331651 118331778 - 116890584 MODEL JAAIVD010000025;XR_004386746 snorna 625896803 Spry1 sprouty RTK signaling antagonist 1 INVOLVED IN bud elongation involved in lung branching (ortholog); epithelial to mesenchymal transition involved in cardiac fibroblast development (ortholog); establishment of mitotic spindle orientation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Peritoneal Fibrosis (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 3 116346782 116351513 - 22301074;30032202 116896915 MODEL JAAIVD010000012;XM_032898477;XM_032898478;XM_032898479 XP_032754368;XP_032754369;XP_032754370 protein sprouty homolog 1 protein-coding 625896815 Phax phosphorylated adaptor for RNA export ENCODES a protein that exhibits mRNA cap binding complex binding (ortholog); toxic substance binding (ortholog); INVOLVED IN RNA stabilization (ortholog); snRNA export from nucleus (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) 15 75236515 75254074 - 30032202 116884602 MODEL JAAIVD010000010;XM_032885742 XP_032741633 phosphorylated adapter RNA export protein protein-coding 625896824 LOC116897559 small nucleolar RNA SNORA17 3 144961969 144962100 - 116897559 MODEL JAAIVD010000012;XR_004387572 snorna 625896827 Triqk triple QxxK/R motif containing 1 130637328 130663580 - 22301074 116903279 MODEL JAAIVD010000025;XM_032905703 XP_032761594 triple QxxK/R motif-containing protein protein-coding 625896834 LOC116897547 small nucleolar RNA SNORA17 3 90813654 90813784 + 116897547 MODEL JAAIVD010000012;XR_004387561 snorna 625896837 Hcn2 hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Chronic Cerebral Hypoperfusion (ortholog); Dental Pulp Exposure (ortholog); FOUND IN axon (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 1 155138074 155156965 - 22301074 116905669 MODEL JAAIVD010000025;XM_032908655 XP_032764546 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 protein-coding 625896847 Zp4 zona pellucida glycoprotein 4 ENCODES a protein that exhibits acrosin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); positive regulation of acrosome reaction (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN egg coat (ortholog) 14 24925622 24932128 + 30032202 116884004 MODEL JAAIVD010000009;XM_032885241 XP_032741132 zona pellucida sperm-binding protein 4 protein-coding 625896863 Vps13c vacuolar protein sorting 13 homolog C INVOLVED IN mitochondrion organization (ortholog); negative regulation of type 2 mitophagy (ortholog); response to insulin (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); early-onset Parkinson's disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); dense core granule membrane (ortholog); endoplasmic reticulum membrane (ortholog) 8 62210068 62362238 + 30032202 116907541 MODEL JAAIVD010000027;XM_032910561;XM_032910562 XP_032766452;XP_032766453 vacuolar protein sorting-associated protein 13C protein-coding 625896955 Elk3 ETS transcription factor ELK3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); congenital chylothorax (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 172304634 172366516 - 22301074;30032202 116908195 MODEL JAAIVD010000025;XM_032911481;XM_032911485;XM_032911487;XM_032911491;XM_032911492 XP_032767372;XP_032767376;XP_032767378;XP_032767382;XP_032767383 ETS domain-containing protein Elk-3 protein-coding 625896977 LOC116893048 phytanoyl-CoA dioxygenase, peroxisomal-like 2 29036750 29037610 + 116893048 MODEL JAAIVD010000001 pseudo 625896978 Ooep oocyte expressed protein ENCODES a protein that exhibits RNA binding (ortholog); structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryo implantation (ortholog); embryonic pattern specification (ortholog); FOUND IN apical part of cell (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 8 72550358 72551324 - 22301074;30032202 116908212 MODEL JAAIVD010000027;XM_032911488 XP_032767379 oocyte-expressed protein homolog protein-coding 625896984 Jmy junction mediating and regulatory protein, p53 cofactor ENCODES a protein that exhibits microtubule binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN 'de novo' actin filament nucleation (ortholog); actin polymerization-dependent cell motility (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); FOUND IN autophagosome membrane (ortholog); cell leading edge (ortholog); cytoplasmic vesicle (ortholog) 3 202842088 202912011 + 22301074;30032202 116897290 MODEL JAAIVD010000012;XM_032899023 XP_032754914 junction-mediating and -regulatory protein protein-coding 625896999 LOC116889041 gamma-aminobutyric acid receptor subunit alpha-3-like X 20169269 20345417 + 22301074;30032202 116889041 MODEL JAAIVD010000014;XM_032890235 XP_032746126 protein-coding 625897005 Large1 LARGE xylosyl- and glucuronyltransferase 1 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); hexosyltransferase activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); astrocyte differentiation (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A1 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); neuromuscular junction (ortholog) 17 111163 354500 + 30032202 116886450 MODEL JAAIVD010000011;XM_032887950 XP_032743841 protein-coding 625897022 Tmem63c transmembrane protein 63C ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); osmolarity-sensing monoatomic cation channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN glomerular filtration (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH Albuminuria (ortholog); focal segmental glomerulosclerosis (ortholog); hereditary spastic paraplegia 87 (ortholog); FOUND IN lysosomal membrane (ortholog); plasma membrane (ortholog) 7 101122729 101193183 + 30032202 116905315 MODEL JAAIVD010000026;XM_032908204 XP_032764095 calcium permeable stress-gated cation channel 1 protein-coding 625897050 LOC116909596 zinc finger protein 431-like 9 62115708 62130276 - 30032202 116909596 MODEL JAAIVD010000002;XM_032913218;XM_032913219 XP_032769109;XP_032769110 protein-coding 625897063 LOC116885297 inactive 2'-5'-oligoadenylate synthase 1B 16 32975743 32986327 + 30032202 116885297 MODEL JAAIVD010000004;XM_032886546 XP_032742437 protein-coding 625897073 LOC116914180 U6 spliceosomal RNA 12 75783600 75783705 + 116914180 MODEL JAAIVD010000007;XR_004389723 snrna 625897076 LOC116909355 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 1 195939974 195940438 + 116909355 MODEL JAAIVD010000025 pseudo 625897077 Orai3 ORAI calcium release-activated calcium modulator 3 ENCODES a protein that exhibits store-operated calcium channel activity (ortholog); INVOLVED IN store-operated calcium entry (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 74129740 74134956 - 30032202 116891462 MODEL JAAIVD010000001;XM_032892546 XP_032748437 protein orai-3 protein-coding 625897083 Tsc1 TSC complex subunit 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); adaptive immune response (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; mTOR signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anterior segment dysgenesis (ortholog); autism spectrum disorder (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) 5 7987540 8033114 - 30032202 116901225 MODEL JAAIVD010000023;XM_032902953;XM_032902954;XM_032902955;XM_032902956;XM_032902957 XP_032758844;XP_032758845;XP_032758846;XP_032758847;XP_032758848 hamartin protein-coding 625897122 LOC116909450 uncharacterized LOC116909450 9 56043045 56048395 + 116909450 MODEL JAAIVD010000002;XR_004389072;XR_004389073 ncrna 625897128 Selenoi selenoprotein I ENCODES a protein that exhibits ethanolaminephosphotransferase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); myelination (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 81 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 23765205 23807059 - 30032202 116906010 MODEL JAAIVD010000026;XM_032909049 XP_032764940 ethanolaminephosphotransferase 1 protein-coding 625897142 Relt RELT TNF receptor INVOLVED IN amelogenesis (ortholog); apoptotic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3C (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 99152885 99159762 - 22301074;30032202 116891749 MODEL JAAIVD010000001;XM_032893062 XP_032748953 tumor necrosis factor receptor superfamily member 19L protein-coding 625897156 Mrpl9 mitochondrial ribosomal protein L9 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 62725841 62730569 - 30032202 116896587 MODEL JAAIVD010000012;XM_032897827 XP_032753718 39S ribosomal protein L9, mitochondrial protein-coding 625897167 LOC116896468 palmitoyltransferase ZDHHC3-like 3 57396867 57398091 + 30032202 116896468 MODEL JAAIVD010000012;XM_032897629 XP_032753520 protein-coding 625897173 Pygl glycogen phosphorylase L ENCODES a protein that exhibits AMP binding (ortholog); ATP binding (ortholog); bile acid binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); glucose homeostasis (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog) 7 83870917 83907195 - 22301074;30032202 116905131 MODEL JAAIVD010000026;XM_032907882 XP_032763773 glycogen phosphorylase, liver form protein-coding 625897197 Rhag Rh associated glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); carbon dioxide transmembrane transport (ortholog); carbon dioxide transport (ortholog); ASSOCIATED WITH hemolytic anemia (ortholog); overhydrated hereditary stomatocytosis (ortholog); Rh deficiency syndrome (ortholog); FOUND IN ankyrin-1 complex (ortholog); membrane (ortholog); plasma membrane (ortholog) 4 95043940 95069762 - 22301074;30032202 116898089 MODEL JAAIVD010000003;XM_032899475 XP_032755366 ammonium transporter Rh type A protein-coding 625897211 LOC116911614 uncharacterized LOC116911614 10 28353883 28441419 - 116911614 MODEL JAAIVD010000005 pseudo 625897212 Dnajc11 DnaJ heat shock protein family (Hsp40) member C11 INVOLVED IN cristae formation (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 8758386 8804456 - 30032202 116892403 MODEL JAAIVD010000025;XM_032894085 XP_032749976 dnaJ homolog subfamily C member 11 protein-coding 625897232 LOC116887178 uncharacterized LOC116887178 18 16946193 16948538 + 116887178 MODEL JAAIVD010000013;XR_004386203 ncrna 625897236 Prr15 proline rich 15 6 86759149 86762353 - 116903775 MODEL JAAIVD010000024;XM_032906465 XP_032762356 proline-rich protein 15 protein-coding 625897242 Spsb3 splA/ryanodine receptor domain and SOCS box containing 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); epithelial to mesenchymal transition (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); nucleus (ortholog) 9 2167157 2172687 + 22301074;30032202 116909340 MODEL JAAIVD010000002;XM_032912889 XP_032768780 SPRY domain-containing SOCS box protein 3 protein-coding 625897253 Itpa inosine triphosphatase ENCODES a protein that exhibits dITP diphosphatase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate diphosphatase activity (ortholog); INVOLVED IN chromosome organization (ortholog); ITP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH anemia (ortholog); anodontia (ortholog); Chemotherapy-Induced Febrile Neutropenia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 110408955 110421083 + 22301074;30032202 116901975 MODEL JAAIVD010000023;XM_032904221 XP_032760112 inosine triphosphate pyrophosphatase protein-coding 625897265 Nab2 NGFI-A binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endochondral ossification (ortholog); myelination (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Solitary Fibrous Tumors (ortholog); FOUND IN nucleus (ortholog) 1 206108038 206113950 - 22301074;30032202 116910202 MODEL JAAIVD010000025;XM_032914069;XM_032914079 XP_032769960;XP_032769970 NGFI-A-binding protein 2 protein-coding 625897279 LOC116905741 60S ribosomal protein L10a-like 7 82613264 82613968 - 22301074 116905741 MODEL JAAIVD010000026;XM_032908708 XP_032764599 protein-coding 625897284 Atp6v1c1 ATPase H+ transporting V1 subunit C1 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH DOORS syndrome (ortholog); Neoplasm Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); ATPase complex (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 1 212382048 212418278 - 22301074;30032202 116910850 MODEL JAAIVD010000025;XM_032914607;XM_032914614 XP_032770498;XP_032770505 V-type proton ATPase subunit C 1 protein-coding 625897305 LOC116890086 non-histone chromosomal protein HMG-17-like 1 226783804 226784070 - 116890086 MODEL JAAIVD010000025 pseudo 625897306 Ccdc88a coiled-coil and HOOK domain protein 88A ENCODES a protein that exhibits actin binding (ortholog); epidermal growth factor receptor binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell migration (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH microcephaly (ortholog); PEHO syndrome (ortholog); PEHO-like syndrome (ortholog); FOUND IN cell leading edge (ortholog); centriole (ortholog); centrosome (ortholog) 11 96975645 97136208 + 22301074;30032202 116912273 MODEL JAAIVD010000006;XM_032916262;XM_032916263;XM_032916264 XP_032772153;XP_032772154;XP_032772155 coiled-coil domain containing 88A;girdin protein-coding 625897350 Prdm4 PR/SET domain 4 ENCODES a protein that exhibits death receptor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); cellular response to nutrient (ortholog); negative regulation of cell growth (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) 1 162692854 162718446 + 22301074;30032202 116907314 MODEL JAAIVD010000025;XM_032910263 XP_032766154 PR domain zinc finger protein 4 protein-coding 625897366 Gpn2 GPN-loop GTPase 2 ASSOCIATED WITH Perrault Syndrome 1 (ortholog) 1 24641572 24649306 - 30032202 116895113 MODEL JAAIVD010000025;XM_032896519 XP_032752410 protein-coding 625897375 LOC116883706 glyceraldehyde-3-phosphate dehydrogenase-like 1 205747591 205750708 + 116883706 MODEL JAAIVD010000025 pseudo 625897376 LOC116909733 transmembrane protein 256-like 9 56795818 56796260 + 116909733 MODEL JAAIVD010000002;XM_032913409 XP_032769300 protein-coding 625897380 Iars2 isoleucyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH cataract (ortholog); CATARACTS, GROWTH HORMONE DEFICIENCY, SENSORY NEUROPATHY, SENSORINEURAL HEARING LOSS, AND SKELETAL DYSPLASIA (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 10 63445642 63478505 - 22301074;30032202 116911182 MODEL JAAIVD010000005;XM_032915049 XP_032770940 isoleucine--tRNA ligase, mitochondrial protein-coding 625897407 Gng7 G protein subunit gamma 7 INVOLVED IN behavioral fear response (ortholog); locomotory behavior (ortholog); receptor guanylyl cyclase signaling pathway (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) 1 153870794 153931306 + 22301074;30032202 116904640 MODEL JAAIVD010000025;XM_032907436;XM_032907437;XM_032907438 XP_032763327;XP_032763328;XP_032763329 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-7 protein-coding 625897420 Snrnp40 small nuclear ribonucleoprotein U5 subunit 40 FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nuclear speck (ortholog) 1 27766256 27798063 - 22301074;30032202 116895924 MODEL JAAIVD010000025;XM_032897001 XP_032752892 U5 small nuclear ribonucleoprotein 40 kDa protein protein-coding 625897434 Guca1b guanylate cyclase activator 1B ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN phototransduction (ortholog); visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium/calcium-mediated signaling pathway; retinitis pigmentosa pathway; ASSOCIATED WITH fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); retinitis pigmentosa (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cone photoreceptor outer segment (ortholog) 4 82488175 82495125 - 22301074;30032202 116898042 MODEL JAAIVD010000003;XM_032899434 XP_032755325 guanylyl cyclase-activating protein 2 protein-coding 625897442 LOC116885919 40S ribosomal protein S2-like 16 23910068 23919778 - 116885919 MODEL JAAIVD010000004 pseudo 625897443 Tarbp1 tRNA guanosine 2 -O-methyltransferase TARBP1 ENCODES a protein that exhibits tRNA (guanine(18)-2'-O)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog) 17 45936988 45986667 - 22301074;30032202 116886085 MODEL JAAIVD010000011;XM_032887405 XP_032743296 TAR (HIV-1) RNA binding protein 1;probable methyltransferase TARBP1 protein-coding 625897477 LOC116893299 60S ribosomal protein L7a-like 2 150918115 150922644 - 116893299 MODEL JAAIVD010000001 pseudo 625897478 Gipc2 GIPC PDZ domain containing family member 2 ENCODES a protein that exhibits identical protein binding (ortholog) 3 85157747 85236440 + 22301074 116896787 MODEL JAAIVD010000012;XM_032898256 XP_032754147 PDZ domain-containing protein GIPC2 protein-coding 625897489 Klhdc9 kelch domain containing 9 ENCODES a protein that exhibits cyclin binding (ortholog) 10 50527860 50530328 - 30032202 116911524 MODEL JAAIVD010000005;XM_032915517 XP_032771408 kelch domain-containing protein 9 protein-coding 625897497 LOC116893784 60S ribosomal protein L27a-like 2 34794117 34794615 - 116893784 MODEL JAAIVD010000001 pseudo 625897498 Celf3 CUGBP Elav-like family member 3 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); lncRNA transcription (ortholog); nuclear body organization (ortholog); ASSOCIATED WITH neuromuscular disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleus (ortholog) 3 62684735 62699074 - 30032202 116896585 MODEL JAAIVD010000012;XM_032897812;XM_032897813;XM_032897814;XM_032897816;XM_032897817;XM_032897818;XM_032897819;XM_032897820;XM_032897821;XM_032897822;XM_032897823;XM_032897824 XP_032753703;XP_032753704;XP_032753705;XP_032753707;XP_032753708;XP_032753709;XP_032753710;XP_032753711;XP_032753712;XP_032753713;XP_032753714;XP_032753715 protein-coding 625897541 LOC116885728 vomeronasal type-2 receptor 116-like 16 15673405 15709480 + 22301074;30032202 116885728 MODEL JAAIVD010000004;XM_032887038 XP_032742929 protein-coding 625897550 Amd1 adenosylmethionine decarboxylase 1 ENCODES a protein that exhibits adenosylmethionine decarboxylase activity (ortholog); identical protein binding (ortholog); putrescine binding (ortholog); INVOLVED IN polyamine metabolic process (ortholog); S-adenosylmethionine metabolic process (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); Overweight (ortholog); prostate cancer (ortholog) 18 40064688 40080375 - 22301074;30032202 116886918 MODEL JAAIVD010000013;XM_032888397 XP_032744288 S-adenosylmethionine decarboxylase proenzyme protein-coding 625897562 Mmadhc metabolism of cobalamin associated D ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Homocystinuria-megaloblastic anemia cblD type (ortholog); inherited metabolic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 5 28139114 28157098 - 22301074;30032202 116901399 MODEL JAAIVD010000023;XM_032903273 XP_032759164 methylmalonic aciduria and homocystinuria type D protein, mitochondrial protein-coding 625897574 Rmp64 ribonuclease MRP subunit p64 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of Notch signaling pathway (ortholog); ASSOCIATED WITH anauxetic dysplasia 3 (ortholog); microcephaly (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 4 29590050 29602121 + 30032202 116898867 MODEL JAAIVD010000003;XM_032900235 XP_032756126 Nepro nucleolus and neural progenitor protein protein-coding 625897587 LOC116901846 uncharacterized LOC116901846 5 98860454 98886221 + 116901846 MODEL JAAIVD010000023;XR_004388026 ncrna 625897592 Nup62cl nucleoporin 62 C-terminal like X 91992116 92074601 + 30032202 116888926 MODEL JAAIVD010000014;XM_032890170 XP_032746061 nucleoporin-62 C-terminal-like protein protein-coding 625897605 LOC116895751 60 kDa heat shock protein, mitochondrial-like 3 35908820 35909309 + 116895751 MODEL JAAIVD010000012 pseudo 625897606 LOC116901284 protein B-Myc 5 11485454 11486414 - 30032202 116901284 MODEL JAAIVD010000023;XM_032903073 XP_032758964 protein-coding 625897611 LOC116898314 uncharacterized protein C4orf46 homolog 4 37263800 37277015 + 116898314 MODEL JAAIVD010000003 pseudo 625897612 Pdia6 protein disulfide isomerase family A member 6 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) 7 37069038 37082608 + 22301074;30032202 116904898 MODEL JAAIVD010000026;XM_032907506 XP_032763397 protein disulfide-isomerase A6 protein-coding 625897628 LOC116903120 alpha-enolase-like 6 7030680 7032206 - 116903120 MODEL JAAIVD010000024 pseudo 625897629 Rbm6 RNA binding motif protein 6 8 99095281 99192813 - 22301074;30032202 116907548 MODEL JAAIVD010000027;XM_032910570;XM_032910572 XP_032766461;XP_032766463 RNA-binding protein 6 protein-coding 625897657 Tmem258 transmembrane protein 258 ENCODES a protein that exhibits oligosaccharyltransferase complex binding (ortholog); INVOLVED IN epithelial cell apoptotic process (ortholog); inflammatory response (ortholog); protein N-linked glycosylation (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 2 9681913 9685613 + 22301074;30032202 116890949 MODEL JAAIVD010000001;XM_032891595 XP_032747486 protein-coding 625897665 LOC116902608 small nucleolar RNA SNORA17 5 122280857 122280981 + 116902608 MODEL JAAIVD010000023 pseudo 625897666 Ppp1r37 protein phosphatase 1 regulatory subunit 37 2 171062138 171094559 + 22301074 116892525 MODEL JAAIVD010000001;XM_032894281 XP_032750172 protein-coding 625897683 LOC116884954 glyceraldehyde-3-phosphate dehydrogenase-like 15 30656046 30657089 - 116884954 MODEL JAAIVD010000010 pseudo 625897684 Ccdc17 coiled-coil domain containing 17 ASSOCIATED WITH colorectal adenocarcinoma (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog) 1 40236740 40240867 + 116898400 MODEL JAAIVD010000025;XM_032899691;XM_032899696 XP_032755582;XP_032755587 coiled-coil domain-containing protein 17 protein-coding 625897704 Nol6 nucleolar protein 6 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN condensed nuclear chromosome (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 1 117051868 117061713 + 30032202 116902478 MODEL JAAIVD010000025;XM_032905026 XP_032760917 protein-coding 625897734 LOC116887099 keratin-associated protein 10-1-like 18 1122312 1123550 - 22301074;30032202 116887099 MODEL JAAIVD010000013;XM_032888620;XM_032888621;XM_032888622;XM_032888624 XP_032744511;XP_032744512;XP_032744513;XP_032744515 keratin-associated protein 10-3-like;keratin-associated protein 10-8-like protein-coding 625897747 LOC116901034 sperm motility kinase-like 5 130136089 130136700 - 116901034 MODEL JAAIVD010000023 pseudo 625897748 Gja1 gap junction protein alpha 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-catenin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN adult heart development (ortholog); ATP transport (ortholog); atrial ventricular junction remodeling (ortholog); PARTICIPATES IN connexin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenoma (ortholog); alcohol use disorder (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell contact zone (ortholog) 18 33164405 33176064 + 22301074;30032202 116887201 MODEL JAAIVD010000013;XM_032888757 XP_032744648 gap junction alpha-1 protein protein-coding 625897754 LOC116907135 barrier-to-autointegration factor-like 1 158804645 158804897 - 116907135 MODEL JAAIVD010000025 pseudo 625897755 LOC116894313 heterogeneous nuclear ribonucleoprotein A1-like 2 144681268 144682259 + 22301074 116894313 MODEL JAAIVD010000001;XM_032896009 XP_032751900 protein-coding 625897759 Espn espin ENCODES a protein that exhibits actin filament binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); locomotory behavior (ortholog); microvillar actin bundle assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 36 (ortholog); Deafness (ortholog); FOUND IN actin cytoskeleton (ortholog); apical ectoplasmic specialization (ortholog); brush border (ortholog) 1 8588223 8621257 + 30032202 116892325 MODEL JAAIVD010000025;XM_032893953;XM_032893961;XM_032893971 XP_032749844;XP_032749852;XP_032749862 protein-coding 625897786 Gabra5 gamma-aminobutyric acid type A receptor subunit alpha5 ENCODES a protein that exhibits GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog); dendrite (ortholog) 2 141775468 141890756 + 22301074;30032202 116892038 MODEL JAAIVD010000001;XM_032893499;XM_032893500;XM_032893502;XM_032893503;XM_032893504 XP_032749390;XP_032749391;XP_032749393;XP_032749394;XP_032749395 gamma-aminobutyric acid receptor subunit alpha-5 protein-coding 625897813 Rps6ka3 ribosomal protein S6 kinase A3 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH bone development disease (ortholog); Coffin-Lowry syndrome (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 33888916 33995012 - 22301074;30032202 116888961 MODEL JAAIVD010000014;XM_032890189;XM_032890190;XM_032890191;XM_032890192;XM_032890193 XP_032746080;XP_032746081;XP_032746082;XP_032746083;XP_032746084 ribosomal protein S6 kinase alpha-3 protein-coding 625897853 LOC116893146 small nuclear ribonucleoprotein E-like 2 96062138 96063496 + 116893146 MODEL JAAIVD010000001 pseudo 625897854 Areg amphiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in mammary gland duct morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); epithelial cell proliferation involved in mammary gland duct elongation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asthma (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 11 4535263 4542455 + 30032202 116912366 MODEL JAAIVD010000006;XM_032916425 XP_032772316 protein-coding 625897863 Rwdd3 RWD domain containing 3 INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of hypoxia-inducible factor-1alpha signaling pathway (ortholog); positive regulation of protein sumoylation (ortholog) 3 38712310 38727796 + 22301074;30032202 116896314 MODEL JAAIVD010000012;XM_032897403;XM_032897404;XM_032897405 XP_032753294;XP_032753295;XP_032753296 RWD domain-containing protein 3 protein-coding 625897878 Cps1 carbamoyl-phosphate synthase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); carbamoyl-phosphate synthase (ammonia) activity (ortholog); INVOLVED IN carbamoyl phosphate biosynthetic process (ortholog); cellular response to ammonium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); Alcoholic Liver Diseases (ortholog); Animal Hepatitis (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog) 4 139655447 139743127 - 22301074;30032202 116898525 MODEL JAAIVD010000003;XM_032899749 XP_032755640 carbamoyl-phosphate synthase [ammonia], mitochondrial protein-coding 625897909 LOC116905797 galectin-1-like 7 94068990 94069356 - 116905797 MODEL JAAIVD010000026 pseudo 625897910 LOC116889301 40S ribosomal protein S8-like X 15292115 15292749 - 116889301 MODEL JAAIVD010000014 pseudo 625897911 LOC116886966 uncharacterized LOC116886966 18 35985669 36050250 + 30032202 116886966 MODEL JAAIVD010000013;XM_032888461 XP_032744352 uncharacterized protein LOC116886966 protein-coding 625897923 Eml5 EMAP like 5 7 111943713 112062876 - 30032202 116905348 MODEL JAAIVD010000026;XM_032908248;XM_032908250;XM_032908251;XM_032908252;XM_032908253;XM_032908254 XP_032764139;XP_032764141;XP_032764142;XP_032764143;XP_032764144;XP_032764145 echinoderm microtubule-associated protein-like 5 protein-coding 625897994 LOC116889807 50S ribosomal protein L7/L12-like 22301074;30032202 116889807 MODEL JAAIVD010000764;XM_032890654 XP_032746545 protein-coding 625897995 LOC116888896 dystrophin-like X 43775295 43799291 - 116888896 MODEL JAAIVD010000014;XM_032890157;XR_004386354 XP_032746048 protein-coding 625898005 Smim41 small integral membrane protein 41 1 261796169 261796524 - 116890215 MODEL JAAIVD010000025;XM_032890951 XP_032746842 protein-coding 625898009 Sec14l1 SEC14 like lipid binding 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); RIG-I binding (ortholog); INVOLVED IN choline transport (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 66918752 66965877 - 30032202 116908760 MODEL JAAIVD010000002;XM_032912111 XP_032768002 SEC14-like protein 1 protein-coding 625898030 Prob1 proline rich basic protein 1 FOUND IN nucleoplasm (ortholog) 15 8722869 8726679 + 30032202 116884600 MODEL JAAIVD010000010;XM_032885740 XP_032741631 proline-rich basic protein 1 protein-coding 625898034 LOC116903257 glyceraldehyde-3-phosphate dehydrogenase-like 6 22733803 22736704 + 22301074;30032202 116903257 MODEL JAAIVD010000024;XM_032905639;XM_032905640 XP_032761530;XP_032761531 protein-coding 625898044 LOC116915224 60S ribosomal protein L7a-like 14 68543214 68544462 - 116915224 MODEL JAAIVD010000009 pseudo 625898045 LOC116887862 aldose reductase-related protein 2-like X 45051638 45052334 + 116887862 MODEL JAAIVD010000014 pseudo 625898046 LOC116886276 PRAME family member 12-like 1 14412243 14422639 + 22301074;30032202 116886276 MODEL JAAIVD010000025;XM_032887702 XP_032743593 protein-coding 625898054 Dld dihydrolipoamide dehydrogenase ENCODES a protein that exhibits dihydrolipoyl dehydrogenase (NADH) activity (ortholog); flavin adenine dinucleotide binding (ortholog); lipoamide binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Congenital Infantile Lactic Acidosis due to LAD Deficiency (ortholog); genetic disease (ortholog); lactic acidosis (ortholog); FOUND IN acrosomal matrix (ortholog); branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cilium (ortholog) 7 44701254 44718605 - 22301074;30032202 116904949 MODEL JAAIVD010000026;XM_032907593 XP_032763484 dihydrolipoyl dehydrogenase, mitochondrial protein-coding 625898072 LOC116888869 immunoglobulin superfamily member 1-like X 113056748 113062415 + 116888869 MODEL JAAIVD010000014;XM_032890130 XP_032746021 protein-coding 625898087 LOC116894562 bcl-2-like protein 2 2 178552985 178553749 - 116894562 MODEL JAAIVD010000001 pseudo 625898088 LOC116913244 glutaredoxin-1-like 12 78077432 78077787 + 116913244 MODEL JAAIVD010000007 pseudo 625898089 Gabra4 gamma-aminobutyric acid type A receptor subunit alpha4 ENCODES a protein that exhibits transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN central nervous system development (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); FOUND IN GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog); postsynaptic specialization membrane (ortholog) 11 28422950 28499270 - 22301074;30032202 116911938 MODEL JAAIVD010000006;XM_032915831;XM_032915832;XM_032915833 XP_032771722;XP_032771723;XP_032771724 gamma-aminobutyric acid receptor subunit alpha-4 protein-coding 625898111 Gnat3 G protein subunit alpha transducin 3 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); response to nicotine (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); axoneme (ortholog) 6 64532827 64581116 - 22301074;30032202 116903654 MODEL JAAIVD010000024;XM_032906311 XP_032762202 guanine nucleotide-binding protein G(t) subunit alpha-3 protein-coding 625898123 LOC116897630 small nucleolar RNA SNORD123 3 148582116 148582185 + 116897630 MODEL JAAIVD010000012;XR_004387610 snorna 625898126 LOC116905352 DNA polymerase alpha catalytic subunit-like 7 112965033 113006008 + 30032202 116905352 MODEL JAAIVD010000026;XM_032908266;XM_032908267 XP_032764157;XP_032764158 protein-coding 625898136 LOC116895855 vomeronasal type-2 receptor 1-like 3 90958092 90963871 + 116895855 MODEL JAAIVD010000012 pseudo 625898137 LOC116892934 glyceraldehyde-3-phosphate dehydrogenase-like 2 207826194 207827226 + 116892934 MODEL JAAIVD010000001 pseudo 625898138 LOC116900434 olfactory receptor 4C15-like 5 70684127 70685065 - 22301074 116900434 MODEL JAAIVD010000023;XM_032902175 XP_032758066 protein-coding 625898142 LOC116906326 U6 spliceosomal RNA 7 73508914 73509021 - 116906326 MODEL JAAIVD010000026;XR_004388613 snrna 625898145 Nup35 nucleoporin 35 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH intestinal pseudo-obstruction (ortholog); pneumoconiosis (ortholog); FOUND IN nuclear envelope (ortholog); nuclear lamina (ortholog); nuclear membrane (ortholog) 5 57817253 57840193 + 22301074;30032202 116901569 MODEL JAAIVD010000023;XM_032903566 XP_032759457 nucleoporin NUP35 protein-coding 625898158 LOC116883590 prolactin-3B1 14 46551068 46556610 - 22301074;30032202 116883590 MODEL JAAIVD010000009;XM_032884771 XP_032740662 protein-coding 625898167 LOC116893279 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial-like 2 146211770 146212861 - 116893279 MODEL JAAIVD010000001 pseudo 625898168 Atl3 atlastin GTPase 3 ENCODES a protein that exhibits GTPase-dependent fusogenic activity (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease axonal type 2N (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1F (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) 2 245314 290440 - 22301074;30032202 116894793 MODEL JAAIVD010000001;XM_032896446 XP_032752337 atlastin-3 protein-coding 625898185 Tex47 testis expressed 47 6 139924556 139925373 - 116904135 MODEL JAAIVD010000024;XM_032907025 XP_032762916 testis-expressed protein 47 protein-coding 625898189 Myo5a myosin VA ENCODES a protein that exhibits actin binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN actin filament-based movement (ortholog); axo-dendritic protein transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH dystonia (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); actomyosin (ortholog); actomyosin, myosin complex part (ortholog) 8 69350857 69513052 + 22301074;30032202 116908001 MODEL JAAIVD010000027;XM_032911256 XP_032767147 unconventional myosin-Va protein-coding 625898234 LOC116894831 U6 spliceosomal RNA 2 22838561 22838667 + 116894831 MODEL JAAIVD010000001;XR_004387046 snrna 625898237 Mbd1 methyl-CpG binding domain protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded methylated DNA binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Seizures (ortholog); lung cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 15 57666542 57681023 - 22301074 116884302 MODEL JAAIVD010000010;XM_032885403;XM_032885404;XM_032885406;XM_032885407;XM_032885408;XM_032885409;XM_032885410;XM_032885411;XM_032885412;XR_004385864 XP_032741294;XP_032741295;XP_032741297;XP_032741298;XP_032741299;XP_032741300;XP_032741301;XP_032741302;XP_032741303 methyl-CpG-binding domain protein 1 protein-coding 625898275 Dhcr24 24-dehydrocholesterol reductase ENCODES a protein that exhibits Delta24(24-1) sterol reductase activity (ortholog); Delta24-sterol reductase activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog) 1 48217656 48244095 - 22301074;30032202 116899410 MODEL JAAIVD010000025;XM_032901151 XP_032757042 delta(24)-sterol reductase protein-coding 625898288 LOC116895637 V-type proton ATPase subunit e 1-like 3 176437486 176437764 - 116895637 MODEL JAAIVD010000012 pseudo 625898289 Ints2 integrator complex subunit 2 INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 9 84515988 84561737 + 22301074;30032202 116908725 MODEL JAAIVD010000002;XM_032912069 XP_032767960 protein-coding 625898317 LOC116913362 uncharacterized LOC116913362 12 60218123 60221915 - 116913362 MODEL JAAIVD010000007;XR_004389612 ncrna 625898321 LOC116885434 uncharacterized LOC116885434 16 16239401 16241003 - 116885434 MODEL JAAIVD010000004;XR_004386007 ncrna 625898325 Tbcc tubulin folding cofactor C ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 82981604 82982803 - 22301074;30032202 116899092 MODEL JAAIVD010000003;XM_032900600 XP_032756491 tubulin-specific chaperone C protein-coding 625898330 LOC116884566 protocadherin beta-18-like 15 1142009 1145075 + 22301074 116884566 MODEL JAAIVD010000010;XM_032885708 XP_032741599 protein-coding 625898335 LOC116902991 ubiquitin-conjugating enzyme E2 variant 2-like 1 122865033 122865463 + 116902991 MODEL JAAIVD010000025 pseudo 625898336 Sh3yl1 SH3 and SYLF domain containing 1 ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); regulation of ruffle assembly (ortholog); FOUND IN ruffle membrane (ortholog) 7 44309963 44351044 + 22301074;30032202 116904944 MODEL JAAIVD010000026;XM_032907589 XP_032763480 SH3 domain-containing YSC84-like protein 1 protein-coding 625898350 LOC116890909 uncharacterized LOC116890909 2 8866924 8883096 - 116890909 MODEL JAAIVD010000001;XR_004386794 ncrna 625898355 Rpl28 ribosomal protein L28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH middle cerebral artery infarction (ortholog); Weight Gain (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 2 177369622 177371230 + 30032202 116892670 MODEL JAAIVD010000001;XM_032894498 XP_032750389 60S ribosomal protein L28 protein-coding 625898364 Golgb1 golgin B1 INVOLVED IN chondrocyte proliferation (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH cleft palate (ortholog); osteochondrodysplasia (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 4 21757163 21805236 + 30032202 116898830 MODEL JAAIVD010000003;XM_032900183 XP_032756074 golgin subfamily B member 1 protein-coding 625898391 LOC116883587 histone H3.1-like 14 41952004 41976608 - 22301074;30032202 116883587 MODEL JAAIVD010000009;XM_032884768 XP_032740659 protein-coding 625898398 Atf7ip2 activating transcription factor 7 interacting protein 2 9 12084991 12131598 - 30032202 116909926 MODEL JAAIVD010000002;XM_032913695 XP_032769586 activating transcription factor 7-interacting protein 2 protein-coding 625898413 LOC116912519 40S ribosomal protein S16-like 11 79161180 79161647 - 22301074;30032202 116912519 MODEL JAAIVD010000006;XM_032916610 XP_032772501 protein-coding 625898418 Tnfrsf11b TNF receptor superfamily member 11b ENCODES a protein that exhibits heparan sulfate binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); negative regulation of bone resorption (ortholog); negative regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); aortic valve stenosis (ortholog); bipolar disorder (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); receptor complex (ortholog) 1 228712769 228739959 - 22301074 116911439 MODEL JAAIVD010000025;XM_032915410 XP_032771301 tumor necrosis factor receptor superfamily member 11B protein-coding 625898427 Wdcp WD repeat and coiled coil containing ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN protein complex oligomerization (ortholog) 7 25483599 25498983 + 30032202 116906286 MODEL JAAIVD010000026;XM_032909175;XM_032909176;XM_032909177 XP_032765066;XP_032765067;XP_032765068 WD repeat and coiled-coil-containing protein protein-coding 625898441 LOC116893479 zinc finger protein 54-like 2 180741624 180743043 - 116893479 MODEL JAAIVD010000001 pseudo 625898442 Plpp1 phospholipid phosphatase 1 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); diacylglycerol diphosphate phosphatase activity (ortholog); lipid phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid catabolic process (ortholog); phospholipid dephosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; Fabry disease pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); membrane (ortholog) 3 183925678 183987128 - 30032202 116897187 MODEL JAAIVD010000012;XM_032898878;XM_032898879;XM_032898881;XM_032898882 XP_032754769;XP_032754770;XP_032754772;XP_032754773 protein-coding 625898462 LOC116914860 40S ribosomal protein S15a-like 13 53739359 53739760 - 116914860 MODEL JAAIVD010000008 pseudo 625898463 LOC116901387 uncharacterized LOC116901387 5 23118481 23122092 + 116901387 MODEL JAAIVD010000023;XM_032903258 XP_032759149 uncharacterized protein LOC116901387 protein-coding 625898470 Tmem11 transmembrane protein 11 INVOLVED IN mitochondrion organization (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 12 8575779 8576944 + 22301074;30032202 116913400 MODEL JAAIVD010000007;XM_032917582 XP_032773473 transmembrane protein 11, mitochondrial protein-coding 625898475 LOC116887211 60S ribosomal protein L27-like 18 33565262 33565743 + 116887211 MODEL JAAIVD010000013;XR_004386204 pseudo 625898478 Sirt2 sirtuin 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN cellular response to caloric restriction (ortholog); cellular response to epinephrine stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); cocaine dependence (ortholog); high grade glioma (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromosome (ortholog) 2 167216022 167239828 - 22301074 116892377 MODEL JAAIVD010000001;XM_032894039;XM_032894040 XP_032749930;XP_032749931 NAD-dependent protein deacetylase sirtuin-2 protein-coding 625898501 LOC116891782 60S ribosomal protein L7a-like 2 100363735 100364519 - 116891782 MODEL JAAIVD010000001 pseudo 625898502 LOC116899213 uncharacterized LOC116899213 4 88464944 88472091 + 116899213 MODEL JAAIVD010000003;XR_004387697 ncrna 625898507 Hipk4 homeodomain interacting protein kinase 4 ENCODES a protein that exhibits histone kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN regulation of signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 168413946 168423828 - 22301074;30032202 116892424 MODEL JAAIVD010000001;XM_032894111 XP_032750002 homeodomain-interacting protein kinase 4 protein-coding 625898515 LOC116902463 U6 spliceosomal RNA 5 51930014 51930118 - 116902463 MODEL JAAIVD010000023;XR_004388081 snrna 625898518 Nat8l N-acetyltransferase 8 like ENCODES a protein that exhibits L-aspartate N-acetyltransferase activity (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); ASSOCIATED WITH microcephaly (ortholog); N-Acetylaspartate Deficiency (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial matrix (ortholog) 11 70869970 70879038 - 30032202 116912270 MODEL JAAIVD010000006;XM_032916259 XP_032772150 N-acetylaspartate synthetase protein-coding 625898525 Lpgat1 lysophosphatidylglycerol acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); 2-acylglycerophosphocholine O-acyltransferase activity (ortholog); lysophosphatidylethanolamine acyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine acyl-chain remodeling (ortholog); positive regulation of fatty acid biosynthetic process (ortholog); triglyceride biosynthetic process (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) 10 69806775 69873142 + 22301074;30032202 116910996 MODEL JAAIVD010000005;XM_032914712;XM_032914713;XM_032914714;XM_032914715 XP_032770603;XP_032770604;XP_032770605;XP_032770606 acyl-CoA:lysophosphatidylglycerol acyltransferase 1 protein-coding 625898547 Tcp11 t-complex 11 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); germ cell development (ortholog); negative regulation of exocytosis (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 18 5779277 5788961 + 30032202 116887121 MODEL JAAIVD010000013;XM_032888669 XP_032744560 T-complex protein 11 homolog protein-coding 625898561 LOC116889695 signal recognition particle receptor FtsY-like 22301074;30032202 116889695 MODEL JAAIVD010000052;XM_032890582 XP_032746473 protein-coding 625898562 LOC116911885 U6 spliceosomal RNA 10 12115864 12115970 + 116911885 MODEL JAAIVD010000005;XR_004389399 snrna 625898565 LOC116912552 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2-like 11 43124225 43140025 + 22301074 116912552 MODEL JAAIVD010000006;XM_032916653 XP_032772544 protein-coding 625898572 LOC116897062 uncharacterized LOC116897062 1 35081112 35082662 + 116897062 MODEL JAAIVD010000025;XR_004387393 ncrna 625898577 Nif3l1 NGG1 interacting factor 3 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 133938694 133959146 - 30032202 116899429 MODEL JAAIVD010000003;XM_032901178;XM_032901179;XM_032901180;XM_032901181;XM_032901182 XP_032757069;XP_032757070;XP_032757071;XP_032757072;XP_032757073 NIF3-like protein 1 protein-coding 625898599 Bmp10 bone morphogenetic protein 10 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adult heart development (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Fibrosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 6 58890292 58895838 - 22301074;30032202 116902740 MODEL JAAIVD010000024;XM_032905087 XP_032760978 protein-coding 625898603 LOC116909181 olfactory receptor 1496-like 9 92689227 92690165 - 22301074;30032202 116909181 MODEL JAAIVD010000002;XM_032912674 XP_032768565 protein-coding 625898606 LOC116914992 palladin-like 13 27153922 27154943 + 116914992 MODEL JAAIVD010000008;XM_032919400 XP_032775291 protein-coding 625898610 LOC116907831 TATA element modulatory factor-like 8 6013983 6016310 - 116907831 MODEL JAAIVD010000027 pseudo 625898611 LOC116902565 small nucleolar RNA SNORA48 5 86513073 86513216 - 116902565 MODEL JAAIVD010000023;XR_004388161 snorna 625898614 LOC116907140 ubiquitin-conjugating enzyme E2 J2-like 8 49813066 49818185 - 116907140 MODEL JAAIVD010000027 pseudo 625898615 Dpy19l2 dpy-19 like 2 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spermatogenic failure 9 (ortholog); FOUND IN nuclear inner membrane (ortholog) 8 20565726 20671241 - 30032202 116907243 MODEL JAAIVD010000027;XM_032910202 XP_032766093 probable C-mannosyltransferase DPY19L2 protein-coding 625898640 LOC116900776 60S ribosomal protein L39-like 1 118534969 118535133 - 116900776 MODEL JAAIVD010000025 pseudo 625898641 Osgepl1 O-sialoglycoprotein endopeptidase like 1 ENCODES a protein that exhibits tRNA N(6)-L-threonylcarbamoyladenine synthase activity (ortholog); INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); FOUND IN mitochondrion (ortholog) 4 121941581 121955651 - 22301074;30032202 116899359 MODEL JAAIVD010000003;XM_032901068;XR_004387719 XP_032756959 probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial protein-coding 625898655 LOC116894233 rho-related GTP-binding protein RhoN-like 2 111163156 111163818 + 116894233 MODEL JAAIVD010000001 pseudo 625898656 Crisp1 cysteine rich secretory protein 1 4 95877736 95902534 - 30032202 116898097 MODEL JAAIVD010000003;XM_032899482 XP_032755373 cysteine-rich secretory protein 1 protein-coding 625898668 Ryr2 ryanodine receptor 2 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 9 (ortholog); FOUND IN A band (ortholog); calcium channel complex (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 14 24961087 25354508 - 22301074;30032202 116883960 MODEL JAAIVD010000009;XM_032885202 XP_032741093 protein-coding 625898776 Vasp vasodilator stimulated phosphoprotein ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); axon guidance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); focal adhesion (ortholog) 2 171345745 171361543 + 22301074;30032202 116892541 MODEL JAAIVD010000001;XM_032894304;XM_032894305;XM_032894306;XM_032894307 XP_032750195;XP_032750196;XP_032750197;XP_032750198 vasodilator-stimulated phosphoprotein protein-coding 625898804 LOC116906514 U4 spliceosomal RNA 7 26150803 26150957 + 116906514 MODEL JAAIVD010000026 pseudo 625898805 LOC116892828 solute carrier family 22 member 1 2 191378143 191405105 - 22301074;30032202 116892828 MODEL JAAIVD010000001;XM_032894710;XM_032894711 XP_032750601;XP_032750602 protein-coding 625898823 LOC116912071 zinc finger CCCH domain-containing protein 15-like 1 237391435 237393155 + 22301074;30032202 116912071 MODEL JAAIVD010000025;XM_032915938 XP_032771829 protein-coding 625898828 C7H14orf180 chromosome 7 C14orf180 homolog ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 7 130092573 130099681 + 116905923 MODEL JAAIVD010000026;XM_032908914 XP_032764805 nutritionally-regulated adipose and cardiac enriched protein homolog protein-coding 625898837 Nutm1 NUT midline carcinoma family member 1 5 90573416 90584669 - 116901738 MODEL JAAIVD010000023;XM_032903874 XP_032759765 NUT family member 1 protein-coding 625898848 LOC116904380 amiloride-sensitive amine oxidase [copper-containing]-like 6 91996582 91997531 - 116904380 MODEL JAAIVD010000024 pseudo 625898849 Mrps24 mitochondrial ribosomal protein S24 FOUND IN mitochondrion (ortholog) 11 74667555 74671358 - 22301074;30032202 116912104 MODEL JAAIVD010000006;XM_032916002 XP_032771893 28S ribosomal protein S24, mitochondrial protein-coding 625898857 LOC116885046 small nucleolar RNA SNORA17 15 43366419 43366549 + 116885046 MODEL JAAIVD010000010;XR_004385932 snorna 625898860 LOC116890510 small nucleolar RNA SNORA48 1 199828948 199829089 - 116890510 MODEL JAAIVD010000025;XR_004386694 snorna 625898863 Cdadc1 cytidine and dCMP deaminase domain containing 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); importin-alpha family protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA cytosine deamination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 64790209 64819334 + 22301074;30032202 116913124 MODEL JAAIVD010000007;XM_032917282;XM_032917283 XP_032773173;XP_032773174 cytidine and dCMP deaminase domain-containing protein 1 protein-coding 625898882 LOC116892627 vomeronasal type-1 receptor 2-like 2 173979625 173980581 - 22301074;30032202 116892627 MODEL JAAIVD010000001;XM_032894445 XP_032750336 protein-coding 625898885 LOC116911528 5' exonuclease Apollo-like 10 35952714 35953786 - 116911528 MODEL JAAIVD010000005 pseudo 625898886 LOC116894666 trace amine-associated receptor 4 2 210021354 210022397 + 22301074;30032202 116894666 MODEL JAAIVD010000001;XM_032896369 XP_032752260 protein-coding 625898889 LOC116914863 beta-defensin 1 13 64682531 64697377 - 22301074;30032202 116914863 MODEL JAAIVD010000008;XM_032919311 XP_032775202 protein-coding 625898895 Hoxc12 homeobox C12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 1 260144357 260145959 - 22301074;30032202 116890190 MODEL JAAIVD010000025;XM_032890926 XP_032746817 homeobox protein Hox-C12 protein-coding 625898899 LOC116892713 zinc finger protein 419-like 2 179050057 179056079 + 30032202 116892713 MODEL JAAIVD010000001;XM_032894579 XP_032750470 protein-coding 625898908 Ddx20 DEAD-box helicase 20 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 3 52446624 52454740 + 22301074;30032202 116896419 MODEL JAAIVD010000012;XM_032897564 XP_032753455 probable ATP-dependent RNA helicase DDX20 protein-coding 625898923 Rangrf RAN guanine nucleotide release factor ENCODES a protein that exhibits channel activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); mitotic spindle assembly (ortholog); positive regulation of membrane depolarization during cardiac muscle cell action potential (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiac Arrhythmias (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 48568895 48570268 - 30032202 116909631 MODEL JAAIVD010000002;XM_032913270 XP_032769161 protein-coding 625898932 Dnajb5 DnaJ heat shock protein family (Hsp40) member B5 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); response to unfolded protein (ortholog); ASSOCIATED WITH myopathy (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 1 3551897 3560589 - 22301074;30032202 116891220 MODEL JAAIVD010000025;XM_032892063;XM_032892072;XM_032892081 XP_032747954;XP_032747963;XP_032747972 dnaJ homolog subfamily B member 5 protein-coding 625898946 Fga fibrinogen alpha chain ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); structural molecule activity (ortholog); INVOLVED IN acute-phase response (ortholog); blood coagulation (ortholog); blood coagulation, common pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN blood microparticle (ortholog); cell cortex (ortholog); cell surface (ortholog) 3 70491353 70498618 - 22301074;30032202 116896746 MODEL JAAIVD010000012;XM_032898188 XP_032754079 protein-coding 625898956 Hspbap1 HSPB1 associated protein 1 4 20547448 20602990 + 30032202 116898812 MODEL JAAIVD010000003;XM_032900163 XP_032756054 HSPB1-associated protein 1 protein-coding 625898968 LOC116908041 zinc finger protein 844-like 8 115263180 115265336 + 116908041 MODEL JAAIVD010000027;XM_032911315 XP_032767206 protein-coding 625898973 LOC116899903 small nucleolar RNA SNORA17 4 37194911 37195027 - 116899903 MODEL JAAIVD010000003 pseudo 625898974 Limd1 LIM domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN cell migration (ortholog); cytoskeleton organization (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 8 114596387 114646805 + 30032202 116908026 MODEL JAAIVD010000027;XM_032911290;XM_032911291 XP_032767181;XP_032767182 LIM domain-containing protein 1;LIM domains containing 1 protein-coding 625898989 Tssk2 testis specific serine kinase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein autophosphorylation (ortholog); spermatid development (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); cytoplasm (ortholog) 4 3164202 3165552 + 22301074;30032202 116898657 MODEL JAAIVD010000003;XM_032899891 XP_032755782 testis-specific serine/threonine-protein kinase 2 protein-coding 625898994 LOC116911575 developmental pluripotency-associated protein 2-like 10 14295659 14296573 - 116911575 MODEL JAAIVD010000005 pseudo 625898995 LOC116911939 uncharacterized LOC116911939 11 25459456 25513996 - 30032202 116911939 MODEL JAAIVD010000006;XM_032915834 XP_032771725 uncharacterized protein LOC116911939 protein-coding 625899003 Fkbp4 FKBP prolyl isomerase 4 ENCODES a protein that exhibits ATP binding (ortholog); copper-dependent protein binding (ortholog); GTP binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); copper ion transport (ortholog); embryo implantation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 6 19265028 19273062 + 22301074 116903211 MODEL JAAIVD010000024;XM_032905584 XP_032761475 peptidyl-prolyl cis-trans isomerase FKBP4 protein-coding 625899017 Nanog Nanog homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell differentiation (ortholog); cellular response to erythropoietin (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH colon cancer (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); nucleolus (ortholog) 6 24378513 24386158 - 22301074;30032202 116904599 MODEL JAAIVD010000024;XM_032907394;XM_032907395;XM_032907396 XP_032763285;XP_032763286;XP_032763287 homeobox protein NANOG protein-coding 625899030 Pex14 peroxisomal biogenesis factor 14 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); microtubule anchoring (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); ovarian cyst (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN fibrillar center (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) 1 11674848 11811973 + 30032202 116892701 MODEL JAAIVD010000025;XM_032894566 XP_032750457 peroxisomal membrane protein PEX14 protein-coding 625899043 Ggt6 gamma-glutamyltransferase 6 PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway 9 43080990 43084548 - 30032202 116910145 MODEL JAAIVD010000002;XM_032913994 XP_032769885 glutathione hydrolase 6 protein-coding 625899051 Rara retinoic acid receptor alpha ENCODES a protein that exhibits alpha-actinin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bone development (ortholog); cellular response to estrogen stimulus (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); chromatin (ortholog); cytoplasm (ortholog) 9 55468152 55513456 - 22301074;30032202 116909131 MODEL JAAIVD010000002;XM_032912613;XM_032912614;XM_032912615;XM_032912616 XP_032768504;XP_032768505;XP_032768506;XP_032768507 protein-coding 625899072 LOC116890139 lymphocyte antigen 6B-like 1 247740335 247744159 - 30032202 116890139 MODEL JAAIVD010000025;XM_032890876 XP_032746767 protein-coding 625899080 LOC116903201 C-type lectin domain family 2 member D2-like 6 18966730 18974584 - 30032202 116903201 MODEL JAAIVD010000024;XM_032905578 XP_032761469 protein-coding 625899087 Strap serine/threonine kinase receptor associated protein ENCODES a protein that exhibits mRNA binding (ortholog); signaling receptor binding (ortholog); U2 snRNP binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); colorectal carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 6 11684541 11699681 - 22301074;30032202 116903144 MODEL JAAIVD010000024;XM_032905508 XP_032761399 serine-threonine kinase receptor-associated protein protein-coding 625899101 LOC116913374 coiled-coil domain-containing protein 70-like 12 28642957 28644451 - 116913374 MODEL JAAIVD010000007;XM_032917544 XP_032773435 protein-coding 625899107 Ddx42 DEAD-box helicase 42 ENCODES a protein that exhibits RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); regulation of apoptotic process (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Cachexia (ortholog); myelodysplastic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 9 72870588 72902523 - 22301074 116909826 MODEL JAAIVD010000002;XM_032913542;XM_032913543;XM_032913544 XP_032769433;XP_032769434;XP_032769435 ATP-dependent RNA helicase DDX42 protein-coding 625899135 Spon2 spondin 2 ENCODES a protein that exhibits antigen binding (ortholog); lipopolysaccharide binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Carotid Artery Injuries (ortholog); meningioma (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 11 71621320 71627976 + 30032202 116912756 MODEL JAAIVD010000006;XM_032916907 XP_032772798 spondin-2 protein-coding 625899145 LOC116889706 tRNA (guanine-N(1)-)-methyltransferase-like 22301074;30032202 116889706 MODEL JAAIVD010000059;XM_032890588 XP_032746479 protein-coding 625899146 LOC116893705 olfactory receptor 5B12-like 2 13260579 13261526 + 22301074;30032202 116893705 MODEL JAAIVD010000001;XM_032895421 XP_032751312 protein-coding 625899149 LOC116906176 proliferation-associated protein 2G4-like 7 107290621 107433762 - 116906176 MODEL JAAIVD010000026 pseudo 625899150 Mtg1 mitochondrial ribosome associated GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); regulation of mitochondrial translation (ortholog); regulation of respiratory system process (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog) 2 61721028 61733621 - 22301074;30032202 116891348 MODEL JAAIVD010000001;XM_032892339;XM_032892340 XP_032748230;XP_032748231 mitochondrial ribosome-associated GTPase 1 protein-coding 625899167 LOC116900774 protein WFDC9 5 153302745 153313669 + 116900774 MODEL JAAIVD010000023;XM_032902486 XP_032758377 protein-coding 625899175 LOC116886619 uncharacterized LOC116886619 17 14743410 14780933 - 116886619 MODEL JAAIVD010000011;XM_032888126 XP_032744017 uncharacterized protein LOC116886619 protein-coding 625899188 Ssmem1 serine rich single-pass membrane protein 1 6 109040978 109051361 - 116902911 MODEL JAAIVD010000024;XM_032905238;XM_032905239 XP_032761129;XP_032761130 serine-rich single-pass membrane protein 1 protein-coding 625899197 Rasgef1b RasGEF domain family member 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); juvenile rheumatoid arthritis (ortholog) 11 9465540 9818730 - 22301074;30032202 116912794 MODEL JAAIVD010000006;XM_032916956;XM_032916957;XM_032916958 XP_032772847;XP_032772848;XP_032772849 ras-GEF domain-containing family member 1B protein-coding 625899221 LOC116893184 ubiquitin carboxyl-terminal hydrolase 17-like protein A 2 103715648 103719483 - 22301074;30032202 116893184 MODEL JAAIVD010000001;XM_032895087 XP_032750978 protein-coding 625899225 Ak6 adenylate kinase 6 ENCODES a protein that exhibits AMP kinase activity (ortholog); FOUND IN Cajal body (ortholog); centrosome (ortholog); nuclear speck (ortholog) 3 158035070 158046934 + 22301074;30032202 116897095 MODEL JAAIVD010000012;XM_032898736 XP_032754627 adenylate kinase isoenzyme 6 protein-coding 625899234 Pdzk1 PDZ domain containing 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); scavenger receptor binding (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); in utero embryonic development (ortholog); positive regulation of protein localization to membrane (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Breast Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 3 60441236 60472295 - 30032202 116896492 MODEL JAAIVD010000012;XM_032897665;XM_032897666;XM_032897667 XP_032753556;XP_032753557;XP_032753558 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 protein-coding 625899252 Neurl3 neuralized E3 ubiquitin protein ligase 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN ERK1 and ERK2 cascade (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog) 4 112485463 112493915 - 116899285 MODEL JAAIVD010000003;XM_032900916 XP_032756807 E3 ubiquitin-protein ligase NEURL3 protein-coding 625899261 LOC116894017 olfactory receptor 51G2-like 2 101877164 101878123 + 22301074 116894017 MODEL JAAIVD010000001;XM_032895732 XP_032751623 protein-coding 625899264 Maz MYC associated zinc finger protein ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 74866968 74871271 + 30032202 116891490 MODEL JAAIVD010000001;XM_032892594 XP_032748485 myc-associated zinc finger protein protein-coding 625899273 LOC116894418 keratin-associated protein 19-3-like 2 158728061 158728306 - 116894418 MODEL JAAIVD010000001;XM_032896123 XP_032752014 protein-coding 625899276 Tmem106c transmembrane protein 106C 1 270774815 270780605 + 116884603 MODEL JAAIVD010000025;XM_032885746 XP_032741637 protein-coding 625899288 Krtcap3 keratinocyte associated protein 3 ASSOCIATED WITH short-rib thoracic dysplasia 10 with or without polydactyly (ortholog) 7 22827264 22828830 - 116905973 MODEL JAAIVD010000026;XM_032908981;XM_032908983 XP_032764872;XP_032764874 keratinocyte-associated protein 3 protein-coding 625899301 LOC116915217 prolactin-like 14 46514710 46525488 - 22301074;30032202 116915217 MODEL JAAIVD010000009;XM_032919597 XP_032775488 protein-coding 625899309 LOC116889575 U6 spliceosomal RNA X 7688382 7688491 - 116889575 MODEL JAAIVD010000014;XR_004386491 snrna 625899312 LOC116894354 glandular kallikrein-7, submandibular/renal 2 155370997 155374990 - 22301074;30032202 116894354 MODEL JAAIVD010000001;XM_032896053;XM_032896054 XP_032751944;XP_032751945 protein-coding 625899322 LOC116901698 olfactory receptor 1J4-like 5 82054102 82055040 + 22301074;30032202 116901698 MODEL JAAIVD010000023;XM_032903827 XP_032759718 protein-coding 625899325 Fam178b family with sequence similarity 178 member B 4 112786350 112872276 - 116898137 MODEL JAAIVD010000003;XM_032899511;XM_032899512;XM_032899513 XP_032755402;XP_032755403;XP_032755404 protein FAM178B protein-coding 625899349 Cbr3 carbonyl reductase 3 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); carbonyl reductase (NADPH) activity (ortholog); NADPH binding (ortholog); INVOLVED IN cognition (ortholog); phylloquinone catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Familial Platelet Disorder with Associated Myeloid Malignancy (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 4 50945959 50954683 - 30032202 116898973 MODEL JAAIVD010000003;XM_032900397 XP_032756288 carbonyl reductase [NADPH] 3 protein-coding 625899356 Cpm carboxypeptidase M PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); endometriosis (ortholog); silicosis (ortholog) 1 195729271 195786249 + 22301074;30032202 116909296 MODEL JAAIVD010000025;XM_032912838 XP_032768729 protein-coding 625899369 LOC116888891 protein Jade-3 X 3066551 3082048 - 30032202 116888891 MODEL JAAIVD010000014;XM_032890153 XP_032746044 protein-coding 625899376 Eeig2 EEIG family member 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 3 49262089 49309365 + 116896351 MODEL JAAIVD010000012;XM_032897453;XM_032897454 XP_032753344;XP_032753345 Fam102b family with sequence similarity 102 member B;protein FAM102B protein-coding 625899394 LOC116910575 olfactory receptor 1D2 9 93074214 93075149 + 22301074 116910575 MODEL JAAIVD010000002;XM_032914499 XP_032770390 protein-coding 625899397 LOC116886744 small nucleolar RNA SNORA17 17 13207175 13207289 + 116886744 MODEL JAAIVD010000011 pseudo 625899398 Naga alpha-N-acetylgalactosaminidase ENCODES a protein that exhibits alpha-N-acetylgalactosaminidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carbohydrate catabolic process (ortholog); glycolipid catabolic process (ortholog); ASSOCIATED WITH angiokeratoma (ortholog); COVID-19 (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog) 1 252058891 252067621 - 30032202 116914271 MODEL JAAIVD010000025;XM_032918496 XP_032774387 protein-coding 625899412 LOC116914249 uncharacterized LOC116914249 13 31558937 31572890 + 116914249 MODEL JAAIVD010000008;XR_004389739 ncrna 625899419 LOC116893002 cytochrome P450 2C55 2 222179179 222187145 + 22301074;30032202 116893002 MODEL JAAIVD010000001;XM_032894963 XP_032750854 protein-coding 625899428 Rsad2 radical S-adenosyl methionine domain containing 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) 7 39973632 39984432 - 22301074;30032202 116904923 MODEL JAAIVD010000026;XM_032907552 XP_032763443 radical S-adenosyl methionine domain-containing protein 2 protein-coding 625899438 Clk3 CDC like kinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of RNA splicing (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 51635916 51651093 - 22301074 116908075 MODEL JAAIVD010000027;XM_032911350;XM_032911351 XP_032767241;XP_032767242 dual specificity protein kinase CLK3 protein-coding 625899458 Tmem229a transmembrane protein 229A 6 114395646 114398875 + 116904032 MODEL JAAIVD010000024;XM_032906867 XP_032762758 protein-coding 625899463 LOC116914199 U7 small nuclear RNA 12 24672575 24672636 - 116914199 MODEL JAAIVD010000007;XR_004389734 snrna 625899466 Nav1 neuron navigator 1 INVOLVED IN microtubule bundle formation (ortholog); neuron migration (ortholog); FOUND IN axon initial segment (ortholog); microtubule cytoskeleton (ortholog) 10 107415 279172 + 22301074;30032202 116911208 MODEL JAAIVD010000005;XM_032915084 XP_032770975 protein-coding 625899502 LOC116883719 keratin, type II cuticular Hb6 1 261601011 261607198 - 22301074;30032202 116883719 MODEL JAAIVD010000025;XM_032884947;XM_032884956 XP_032740838;XP_032740847 protein-coding 625899517 Fbxl20 F-box and leucine rich repeat protein 20 INVOLVED IN behavioral fear response (ortholog); regulation of protein catabolic process at presynapse, modulating synaptic transmission (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN glutamatergic synapse (ortholog); Schaffer collateral - CA1 synapse (ortholog); synapse (ortholog) 9 56243992 56301569 + 22301074;30032202 116908552 MODEL JAAIVD010000002;XM_032911756 XP_032767647 F-box/LRR-repeat protein 20 protein-coding 625899536 LOC116907698 interstitial collagenase A 8 3714967 3736194 + 22301074;30032202 116907698 MODEL JAAIVD010000027;XM_032910810 XP_032766701 protein-coding 625899550 Ppp1r14a protein phosphatase 1 regulatory inhibitor subunit 14A INVOLVED IN cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Mesothelioma (ortholog); stomach cancer (ortholog) 2 166658321 166662724 - 22301074;30032202 116892354 MODEL JAAIVD010000001;XM_032894007 XP_032749898 protein phosphatase 1 regulatory subunit 14A protein-coding 625899558 LOC116902365 seminal vesicle secretory protein 4 5 153704669 153706592 + 30032202 116902365 MODEL JAAIVD010000023;XM_032904860 XP_032760751 protein-coding 625899565 LOC116911717 uncharacterized LOC116911717 10 34504133 34507778 + 116911717 MODEL JAAIVD010000005;XR_004389335 ncrna 625899569 LOC116912920 U6 spliceosomal RNA 11 45652364 45652470 + 116912920 MODEL JAAIVD010000006;XR_004389493 snrna 625899572 LOC116888473 uncharacterized LOC116888473 X 109810800 109817804 + 116888473 MODEL JAAIVD010000014;XR_004386315 ncrna 625899577 Sin3a SIN3 transcription regulator family member A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to dopamine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN DNA modification pathway; Hedgehog signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); kinetochore (ortholog) 8 50986820 51041444 + 30032202 116906982 MODEL JAAIVD010000027;XM_032909903;XM_032909904;XM_032909906;XM_032909907;XM_032909908;XM_032909909 XP_032765794;XP_032765795;XP_032765797;XP_032765798;XP_032765799;XP_032765800 paired amphipathic helix protein Sin3a protein-coding 625899616 LOC116888620 prohibitin-like X 46260410 46262631 + 116888620 MODEL JAAIVD010000014 pseudo 625899617 LOC116896134 uncharacterized LOC116896134 3 5000885 5069058 + 116896134 MODEL JAAIVD010000012;XR_004387311;XR_004387312;XR_004387313;XR_004387314;XR_004387315 ncrna 625899630 Tmem238 transmembrane protein 238 2 177361607 177367226 - 116892668 MODEL JAAIVD010000001;XM_032894495 XP_032750386 protein-coding 625899636 LOC116904036 60S ribosomal protein L7a-like 1 150113241 150114053 + 116904036 MODEL JAAIVD010000025 pseudo 625899637 Wdr18 WD repeat domain 18 FOUND IN nucleoplasm (ortholog) 1 154908411 154916110 - 22301074;30032202 116905475 MODEL JAAIVD010000025;XM_032908450;XM_032908460;XM_032908471 XP_032764341;XP_032764351;XP_032764362 WD repeat-containing protein 18 protein-coding 625899657 Dnph1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1 ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN allantoin metabolic process (ortholog); deoxyribonucleoside monophosphate catabolic process (ortholog); dGMP catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 83361143 83364212 - 22301074;30032202 116898046 MODEL JAAIVD010000003;XM_032899439 XP_032755330 protein-coding 625899665 Psmd5 proteasome 26S subunit, non-ATPase 5 INVOLVED IN proteasome regulatory particle assembly (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome regulatory particle, base subcomplex (ortholog) 5 782419 800271 + 22301074;30032202 116901107 MODEL JAAIVD010000023;XM_032902672 XP_032758563 26S proteasome non-ATPase regulatory subunit 5 protein-coding 625899679 LOC116911888 U6 spliceosomal RNA 10 56737728 56737818 + 116911888 MODEL JAAIVD010000005 pseudo 625899680 Clip4 CAP-Gly domain containing linker protein family member 4 7 21362170 21432437 - 30032202 116905953 MODEL JAAIVD010000026;XM_032908954 XP_032764845 CAP-Gly domain-containing linker protein 4 protein-coding 625899700 LOC116908067 olfactory receptor 7E24-like 8 16081531 16082463 - 22301074;30032202 116908067 MODEL JAAIVD010000027;XM_032911339 XP_032767230 protein-coding 625899704 Otulinl OTU deubiquitinase with linear linkage specificity like ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin-like protein peptidase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 3 153063346 153088625 + 30032202 116897058 MODEL JAAIVD010000012;XM_032898679;XM_032898680;XM_032898681 XP_032754570;XP_032754571;XP_032754572 inactive ubiquitin thioesterase OTULINL protein-coding 625899723 LOC116899958 leucine-rich repeat protein SHOC-2-like 5 40247773 40249460 - 116899958 MODEL JAAIVD010000023 pseudo 625899724 LOC116895232 60S ribosomal protein L7a-like 3 20573921 20574384 + 116895232 MODEL JAAIVD010000012 pseudo 625899725 Eeig1 estrogen-induced osteoclastogenesis regulator 1 INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) 5 3074103 3105400 - 116901143 MODEL JAAIVD010000023;XM_032902752 XP_032758643 Fam102a family with sequence similarity 102 member A;protein FAM102A protein-coding 625899740 Pdhb pyruvate dehydrogenase E1 subunit beta ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); pyruvate decarboxylase deficiency (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); pyruvate dehydrogenase complex (ortholog) 12 78585523 78591411 - 30032202 116914035 MODEL JAAIVD010000007;XM_032918316 XP_032774207 pyruvate dehydrogenase E1 component subunit beta, mitochondrial protein-coding 625899754 LOC116887413 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8657801 8661523 - 30032202 116887413 MODEL JAAIVD010000013;XM_032889024;XM_032889025;XM_032889026;XM_032889027;XM_032889028;XM_032889029 XP_032744915;XP_032744916;XP_032744917;XP_032744918;XP_032744919;XP_032744920 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like protein-coding 625899778 Ppm1k protein phosphatase, Mg2+/Mn2+ dependent 1K ENCODES a protein that exhibits manganese ion binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); maple syrup urine disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 83366662 83391129 - 22301074;30032202 116903731 MODEL JAAIVD010000024;XM_032906413;XM_032906414;XM_032906415;XM_032906416 XP_032762304;XP_032762305;XP_032762306;XP_032762307 protein phosphatase 1K, mitochondrial protein-coding 625899794 Banf2 BANF family member 2 ENCODES a protein that exhibits identical protein binding (ortholog) 5 123715575 123728447 + 22301074 116900659 MODEL JAAIVD010000023;XM_032902364 XP_032758255 barrier-to-autointegration factor-like protein protein-coding 625899801 Pgm2l1 phosphoglucomutase 2 like 1 ENCODES a protein that exhibits glucose-1,6-bisphosphate synthase activity (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen storage disease type III pathway; glycogen storage disease type IV pathway; ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Hypotonia, Dysmorphic Facies, and Skin Abnormalities (ortholog) 2 98522699 98566107 + 22301074;30032202 116891736 MODEL JAAIVD010000001;XM_032893039 XP_032748930 glucose 1,6-bisphosphate synthase protein-coding 625899819 Ankrd17 ankyrin repeat domain 17 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blood vessel maturation (ortholog); defense response to bacterium (ortholog); innate immune response (ortholog); ASSOCIATED WITH CHOPRA-AMIEL-GORDON SYNDROME (ortholog); genetic disease (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); male germ cell nucleus (ortholog) 11 3668678 3803049 - 22301074;30032202 116912204 MODEL JAAIVD010000006;XM_032916145;XM_032916146;XM_032916147;XM_032916148;XM_032916149;XM_032916150;XM_032916151;XM_032916152 XP_032772036;XP_032772037;XP_032772038;XP_032772039;XP_032772040;XP_032772041;XP_032772042;XP_032772043 ankyrin repeat domain-containing protein 17 protein-coding 625899870 Ankrd33b ankyrin repeat domain 33B 3 149457560 149530429 + 22301074 116897050 MODEL JAAIVD010000012;XM_032898674 XP_032754565 ankyrin repeat domain-containing protein 33B protein-coding 625899878 LOC116908119 uncharacterized LOC116908119 1 169957225 169958827 + 116908119 MODEL JAAIVD010000025;XR_004388875 ncrna 625899882 LOC116897719 WD repeat-containing protein 5B-like 4 21015893 21021317 + 116897719 MODEL JAAIVD010000003 pseudo 625899883 Mrpl58 mitochondrial ribosomal protein L58 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); translation release factor activity (ortholog); translation release factor activity, codon nonspecific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); rescue of stalled ribosome (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 68690130 68696286 - 22301074;30032202 116909714 MODEL JAAIVD010000002;XM_032913387 XP_032769278 peptidyl-tRNA hydrolase ICT1, mitochondrial protein-coding 625899893 LOC116912349 28S ribosomal protein S17, mitochondrial-like 11 78308624 78309024 + 116912349 MODEL JAAIVD010000006 pseudo 625899894 LOC116910645 U1 spliceosomal RNA 9 83343868 83344031 - 116910645 MODEL JAAIVD010000002;XR_004389181 snrna 625899897 LOC116893450 nitric oxide synthase-interacting protein-like 2 177826845 177827659 + 116893450 MODEL JAAIVD010000001 pseudo 625899898 Mpped2 metallophosphoesterase domain containing 2 ENCODES a protein that exhibits AMP binding (ortholog); GMP binding (ortholog); manganese ion binding (ortholog); ASSOCIATED WITH migraine with aura (ortholog) 5 84607056 84784665 + 22301074 116901718 MODEL JAAIVD010000023;XM_032903849;XM_032903850;XM_032903851;XM_032903852;XM_032903853 XP_032759740;XP_032759741;XP_032759742;XP_032759743;XP_032759744 metallophosphoesterase MPPED2 protein-coding 625899921 LOC116888806 sperm acrosome-associated protein 5 X 14033971 14037087 - 22301074;30032202 116888806 MODEL JAAIVD010000014;XM_032890085 XP_032745976 protein-coding 625899927 LOC116912230 peptidyl-prolyl cis-trans isomerase A-like 1 168396000 168396671 + 116912230 MODEL JAAIVD010000025 pseudo 625899928 LOC116889975 uncharacterized LOC116889975 1 166926413 166927515 + 116889975 MODEL JAAIVD010000025;XR_004386517 ncrna 625899933 LOC116908411 small nucleolar RNA SNORA17 8 46306779 46306903 + 116908411 MODEL JAAIVD010000027 pseudo 625899934 LOC116895050 small nucleolar RNA SNORA17 2 37911829 37911959 - 116895050 MODEL JAAIVD010000001;XR_004387233 snorna 625899937 Higd1c HIG1 hypoxia inducible domain family member 1C INVOLVED IN response to hypoxia (ortholog) 1 262710974 262730566 - 30032202 116884061 MODEL JAAIVD010000025;XM_032885311 XP_032741202 HIG1 domain family member 1C protein-coding 625899945 LOC116895188 40S ribosomal protein S27-like 3 184279427 184284687 - 116895188 MODEL JAAIVD010000012 pseudo 625899946 LOC116899910 U6atac minor spliceosomal RNA 4 142197473 142197604 - 116899910 MODEL JAAIVD010000003;XR_004387882 snrna 625899949 LOC116892953 band 4.1-like protein 3 2 211546910 211548468 + 116892953 MODEL JAAIVD010000001;XM_032894905 XP_032750796 protein-coding 625899954 LOC116888437 claudin-34-like X 47383209 47391712 + 30032202 116888437 MODEL JAAIVD010000014;XM_032889710 XP_032745601 protein-coding 625899960 Oc90 otoconin 90 ENCODES a protein that exhibits calcium ion binding (ortholog); structural molecule activity (ortholog); INVOLVED IN otolith mineralization (ortholog); ASSOCIATED WITH vestibular disease (ortholog); FOUND IN extracellular matrix (ortholog) 1 240038289 240072154 - 22301074;30032202 116912185 MODEL JAAIVD010000025;XM_032916123 XP_032772014 otoconin-90 protein-coding 625899978 LOC116893709 olfactory receptor 5B3-like 2 13360785 13361717 - 22301074;30032202 116893709 MODEL JAAIVD010000001;XM_032895426 XP_032751317 protein-coding 625899981 LOC116886780 U4 spliceosomal RNA 17 48294611 48294776 - 116886780 MODEL JAAIVD010000011 pseudo 625899982 LOC116912961 U1 spliceosomal RNA 11 42980190 42980359 + 116912961 MODEL JAAIVD010000006;XR_004389528 snrna 625899985 LOC116899734 5S ribosomal RNA 4 28899500 28899618 + 116899734 MODEL JAAIVD010000003;XR_004387753 rrna 625899988 Prss16 serine protease 16 FOUND IN endosome (ortholog); lysosome (ortholog) 14 41679990 41687571 + 22301074;30032202 116883455 MODEL JAAIVD010000009;XM_032884603 XP_032740494 thymus-specific serine protease protein-coding 625900004 Ttc34 tetratricopeptide repeat domain 34 1 5853730 5868384 - 22301074 116892083 MODEL JAAIVD010000025;XM_032893561 XP_032749452 tetratricopeptide repeat protein 34 protein-coding 625900015 LOC116893558 ETS domain-containing protein Elk-4-like 2 214019841 214021148 + 116893558 MODEL JAAIVD010000001 pseudo 625900016 Pars2 prolyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH developmental and epileptic encephalopathy 75 (ortholog); genetic disease (ortholog); myoepithelioma (ortholog); FOUND IN mitochondrion (ortholog) 1 48150739 48155773 - 22301074;30032202 116899387 MODEL JAAIVD010000025;XM_032901111;XM_032901119;XM_032901127 XP_032757002;XP_032757010;XP_032757018 probable proline--tRNA ligase, mitochondrial protein-coding 625900030 Tmem181 transmembrane protein 181 ENCODES a protein that exhibits toxic substance binding (ortholog) 2 192503788 192557571 - 30032202 116892850 MODEL JAAIVD010000001;XM_032894741;XM_032894742;XM_032894743;XM_032894744 XP_032750632;XP_032750633;XP_032750634;XP_032750635 protein-coding 625900062 LOC116890083 eukaryotic translation initiation factor 4B-like 1 221908554 221910462 + 116890083 MODEL JAAIVD010000025 pseudo 625900063 LOC116903623 peptidyl-prolyl cis-trans isomerase D-like 6 108128750 108135071 + 116903623 MODEL JAAIVD010000024 pseudo 625900064 Dio2 iodothyronine deiodinase 2 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); lipid metabolic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 103947382 103958011 - 22301074;30032202 116905330 MODEL JAAIVD010000026;XM_032908226 XP_032764117 type II iodothyronine deiodinase protein-coding 625900071 LOC116886645 cuticle collagen 2C-like 17 20704798 20705478 - 116886645 MODEL JAAIVD010000011;XM_032888145 XP_032744036 protein-coding 625900074 Kif2c kinesin family member 2C ENCODES a protein that exhibits microtubule plus-end binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment or maintenance of microtubule cytoskeleton polarity (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); contact dermatitis (ortholog); COVID-19 (ortholog); FOUND IN chromosome, centromeric region (ortholog); glutamatergic synapse (ortholog); kinetochore (ortholog) 1 40784204 40808820 - 22301074;30032202 116898654 MODEL JAAIVD010000025;XM_032899889;XM_032899896 XP_032755780;XP_032755787 kinesin-like protein KIF2C protein-coding 625900100 Ntf3 neurotrophin 3 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); nerve growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 6 21733928 21802823 + 30032202 116903244 MODEL JAAIVD010000024;XM_032905622;XM_032905624;XM_032905625 XP_032761513;XP_032761515;XP_032761516 neurotrophin-3 protein-coding 625900112 LOC116904794 U2 spliceosomal RNA 6 129619597 129619665 + 116904794 MODEL JAAIVD010000024 pseudo 625900113 LOC116903019 40S ribosomal protein SA-like 6 154349806 154351125 + 116903019 MODEL JAAIVD010000024 pseudo 625900114 LOC116902517 U7 small nuclear RNA 5 136555115 136555178 + 116902517 MODEL JAAIVD010000023;XR_004388126 snrna 625900117 LOC116889126 ATP synthase subunit O, mitochondrial-like 1 121752701 121753319 + 116889126 MODEL JAAIVD010000025 pseudo 625900118 Insyn2b inhibitory synaptic factor family member 2B 9 7133858 7243845 + 30032202 116909252 MODEL JAAIVD010000002;XM_032912773;XM_032912774 XP_032768664;XP_032768665 protein INSYN2B protein-coding 625900129 LOC116886603 aldo-keto reductase family 1 member B1-like 17 10959659 10960715 + 116886603 MODEL JAAIVD010000011 pseudo 625900130 LOC116913811 uncharacterized LOC116913811 1 250413420 250419904 - 116913811 MODEL JAAIVD010000025;XR_004389643 ncrna 625900134 LOC116909239 60S ribosomal protein L38-like 9 11018868 11019954 + 116909239 MODEL JAAIVD010000002 pseudo 625900135 LOC116885648 zinc finger protein 11 16 24327719 24333034 + 116885648 MODEL JAAIVD010000004;XM_032886955 XP_032742846 protein-coding 625900141 LOC116904590 taste receptor type 2 member 102-like 6 16549816 16550766 + 22301074;30032202 116904590 MODEL JAAIVD010000024;XM_032907386 XP_032763277 protein-coding 625900144 Marchf1 membrane associated ring-CH-type finger 1 ENCODES a protein that exhibits MHC protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class II (ortholog); immune response (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 22787840 23291759 - 22301074;30032202 116914844 MODEL JAAIVD010000008;XM_032919298 XP_032775189 E3 ubiquitin-protein ligase MARCH1 protein-coding 625900155 Dynlt4 dynein light chain Tctex-type 4 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) 1 40753529 40754282 + 30032202 116898630 MODEL JAAIVD010000025;XM_032899852 XP_032755743 Tctex1d4 Tctex1 domain containing 4;tctex1 domain-containing protein 4 protein-coding 625900160 LOC116908905 ADP/ATP translocase 2-like 9 5996574 5997551 - 116908905 MODEL JAAIVD010000002;XR_004389038 pseudo 625900163 Gprasp2 G protein-coupled receptor associated sorting protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); intellectual disability (ortholog); X-linked deafness 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 87657929 87661121 - 116888614 MODEL JAAIVD010000014;XM_032889913 XP_032745804 G-protein coupled receptor-associated sorting protein 2 protein-coding 625900168 LOC116885050 small nucleolar RNA SNORA17 15 42002444 42002574 - 116885050 MODEL JAAIVD010000010;XR_004385936 snorna 625900171 LOC116889925 ribosome biogenesis regulatory protein homolog 1 42307639 42308802 - 116889925 MODEL JAAIVD010000025 pseudo 625900172 Fam3d FAM3 metabolism regulating signaling molecule D INVOLVED IN aorta development (ortholog); negative regulation of insulin secretion (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN extracellular space (ortholog) 12 78758553 78792930 - 30032202 116913390 MODEL JAAIVD010000007;XM_032917567 XP_032773458 protein FAM3D protein-coding 625900186 Fibp FGF1 intracellular binding protein ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN platelet aggregation (ortholog); ASSOCIATED WITH coloboma (ortholog); genetic disease (ortholog); THAUVIN-ROBINET-FAIVRE SYNDROME (ortholog); FOUND IN membrane (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 2209164 2213527 - 30032202 116890716 MODEL JAAIVD010000001;XM_032891163;XM_032891164 XP_032747054;XP_032747055 acidic fibroblast growth factor intracellular-binding protein protein-coding 625900202 LOC116895767 F-box only protein 6-like 3 46696539 46697366 + 116895767 MODEL JAAIVD010000012 pseudo 625900203 Tp53tg5 TP53 target 5 FOUND IN chromosome (ortholog); nucleolus (ortholog) 5 153479697 153493389 + 116899987 MODEL JAAIVD010000023;XM_032901799 XP_032757690 TP53-target gene 5 protein protein-coding 625900209 LOC116889327 40S ribosomal protein S10-like X 53400232 53400729 + 116889327 MODEL JAAIVD010000014 pseudo 625900210 Asphd2 aspartate beta-hydroxylase domain containing 2 16 41588285 41595197 + 22301074 116885578 MODEL JAAIVD010000004;XM_032886873 XP_032742764 aspartate beta-hydroxylase domain-containing protein 2 protein-coding 625900217 LOC116888190 RRP12-like protein X 121066119 121073823 + 116888190 MODEL JAAIVD010000014 pseudo 625900218 LOC116900286 olfactory receptor 1052 5 63551927 63552865 + 22301074;30032202 116900286 MODEL JAAIVD010000023;XM_032902040 XP_032757931 protein-coding 625900221 LOC116893553 adenosylhomocysteinase-like 2 211124933 211126163 + 116893553 MODEL JAAIVD010000001 pseudo 625900222 Hhla2 HHLA2 member of B7 family INVOLVED IN positive regulation of activated T cell proliferation (ortholog); positive regulation of cytokine production (ortholog); T cell costimulation (ortholog) 4 33977219 33983687 - 116898312 MODEL JAAIVD010000003;XM_032899655 XP_032755546 HERV-H LTR-associating 2;HERV-H LTR-associating protein 2 protein-coding 625900228 LOC116902420 uncharacterized LOC116902420 5 157819781 157822940 + 116902420 MODEL JAAIVD010000023;XR_004388069 ncrna 625900232 LOC116900438 olfactory receptor 4C15-like 5 70777343 70778278 - 22301074 116900438 MODEL JAAIVD010000023;XM_032902179 XP_032758070 protein-coding 625900235 LOC116889392 rhox homeobox family member 2-like X 103538350 103541997 - 22301074 116889392 MODEL JAAIVD010000014;XM_032890493 XP_032746384 protein-coding 625900243 LOC116888981 uncharacterized LOC116888981 X 10178742 10215100 - 116888981 MODEL JAAIVD010000014;XR_004386357 ncrna 625900248 LOC116914908 39S ribosomal protein L37, mitochondrial-like 13 7448890 7450425 - 116914908 MODEL JAAIVD010000008 pseudo 625900249 LOC116895047 small nucleolar RNA SNORA17 2 12022688 12022818 - 116895047 MODEL JAAIVD010000001;XR_004387230 snorna 625900252 Ercc6l ERCC excision repair 6 like, spindle assembly checkpoint helicase ENCODES a protein that exhibits DNA translocase activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); lung adenocarcinoma (ortholog); lung squamous cell carcinoma (ortholog) X 59926483 59942421 - 22301074;30032202 116888752 MODEL JAAIVD010000014;XM_032890045 XP_032745936 DNA excision repair protein ERCC-6-like protein-coding 625900258 Shroom1 shroom family member 1 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 9 35951289 35961650 + 22301074;30032202 116909981 MODEL JAAIVD010000002;XM_032913764 XP_032769655 protein Shroom1 protein-coding 625900270 LOC116892825 centromere/kinetochore protein zw10 homolog 1 63772187 63783763 - 116892825 MODEL JAAIVD010000025 pseudo 625900271 LOC116914179 U6 spliceosomal RNA 12 75370810 75370913 - 116914179 MODEL JAAIVD010000007;XR_004389722 snrna 625900274 LOC116905263 ferritin light chain 1-like 7 98343921 98344696 + 116905263 MODEL JAAIVD010000026;XR_004388507 pseudo 625900277 LOC116900135 olfactory receptor 1N1-like 5 14568755 14569690 - 22301074 116900135 MODEL JAAIVD010000023;XM_032901909 XP_032757800 protein-coding 625900280 Ptgfr prostaglandin F receptor ENCODES a protein that exhibits prostaglandin F receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); endometriosis (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 3 84996974 85028211 - 22301074;30032202 116895467 MODEL JAAIVD010000012;XM_032896730;XM_032896731 XP_032752621;XP_032752622 prostaglandin F2-alpha receptor protein-coding 625900292 LOC116894212 olfactory receptor 507 2 106517184 106518128 + 22301074;30032202 116894212 MODEL JAAIVD010000001;XM_032895925 XP_032751816 protein-coding 625900295 Cd226 CD226 molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); positive regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); positive regulation of immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Colorectal Neoplasms (ortholog); endometriosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 15 43493000 43567253 - 30032202 116884812 MODEL JAAIVD010000010;XM_032886043 XP_032741934 CD226 antigen protein-coding 625900305 LOC116905640 voltage-dependent anion-selective channel protein 1-like 7 27114731 27115621 - 116905640 MODEL JAAIVD010000026 pseudo 625900306 Mid2 midline 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); ASSOCIATED WITH non-syndromic X-linked intellectual disability 101 (ortholog); FOUND IN microtubule (ortholog) X 93082103 93179939 + 22301074 116888506 MODEL JAAIVD010000014;XM_032889799 XP_032745690 probable E3 ubiquitin-protein ligase MID2 protein-coding 625900320 Clrn1 clarin 1 INVOLVED IN actin filament organization (ortholog); auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH branchiootorenal syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN basal part of cell (ortholog); lamellipodium (ortholog); microtubule cytoskeleton (ortholog) 3 196400333 196423538 + 30032202 116896044 MODEL JAAIVD010000012;XM_032897044 XP_032752935 clarin-1 protein-coding 625900326 B3gnt3 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) 13 13265886 13274430 + 22301074;30032202 116914268 MODEL JAAIVD010000008;XM_032918490 XP_032774381 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 3 protein-coding 625900334 Slc27a2 solute carrier family 27 member 2 ENCODES a protein that exhibits enzyme binding (ortholog); fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid alpha-oxidation (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH colorectal cancer (ortholog); Fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 5 105388744 105426312 + 30032202 116901916 MODEL JAAIVD010000023;XM_032904133 XP_032760024 very long-chain acyl-CoA synthetase protein-coding 625900348 LOC116895030 small nucleolar RNA SNORA17 2 88882304 88882434 + 116895030 MODEL JAAIVD010000001;XR_004387216 snorna 625900351 Ppp2r2a protein phosphatase 2 regulatory subunit Balpha ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase 2A binding (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of chromosome segregation (ortholog); response to morphine (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Chromosomal Instability (ortholog); Emphysema (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog); protein phosphatase type 2A complex (ortholog); synapse (ortholog) 12 57422136 57480787 + 22301074;30032202 116913858 MODEL JAAIVD010000007;XM_032918156;XM_032918157;XM_032918158 XP_032774047;XP_032774048;XP_032774049 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform protein-coding 625900373 LOC116900311 olfactory receptor 10AG1-like 5 64124929 64125891 - 22301074 116900311 MODEL JAAIVD010000023;XM_032902067 XP_032757958 protein-coding 625900377 Rps19bp1 ribosomal protein S19 binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 250029292 250032627 - 30032202 116913784 MODEL JAAIVD010000025;XM_032918094 XP_032773985 active regulator of SIRT1 protein-coding 625900385 Adat1 adenosine deaminase tRNA specific 1 ENCODES a protein that exhibits RNA binding (ortholog); tRNA-specific adenosine deaminase activity (ortholog); INVOLVED IN tRNA processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 17 31643686 31677778 - 22301074 116886438 MODEL JAAIVD010000011;XM_032887924;XM_032887925;XM_032887926;XM_032887927;XM_032887928 XP_032743815;XP_032743816;XP_032743817;XP_032743818;XP_032743819 tRNA-specific adenosine deaminase 1 protein-coding 625900412 LOC116883909 BRCA1-associated RING domain protein 1-like 14 440483 460466 - 116883909 MODEL JAAIVD010000009 pseudo 625900413 Foxb2 forkhead box B2 2 16969773 16971269 - 30032202 116893736 MODEL JAAIVD010000001;XM_032895448 XP_032751339 forkhead box protein B2 protein-coding 625900418 Thbs1 thrombospondin 1 ENCODES a protein that exhibits collagen V binding (ortholog); endopeptidase inhibitor activity (ortholog); extracellular matrix binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); blood coagulation, fibrin clot formation (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 5 96245440 96258259 + 22301074;30032202 116900955 MODEL JAAIVD010000023;XM_032902592 XP_032758483 thrombospondin-1 protein-coding 625900442 LOC116887740 U2 spliceosomal RNA 18 39533522 39533654 - 116887740 MODEL JAAIVD010000013 pseudo 625900443 Yes1 YES proto-oncogene 1, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); epidermal growth factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); double outlet right ventricle (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN actin filament (ortholog); cell junction (ortholog); cytoplasm (ortholog) 4 182483414 182556612 - 22301074;30032202 116899731 MODEL JAAIVD010000003;XM_032901770;XM_032901771;XM_032901772;XM_032901773 XP_032757661;XP_032757662;XP_032757663;XP_032757664 tyrosine-protein kinase Yes protein-coding 625900468 Slco2a1 solute carrier organic anion transporter family member 2A1 ENCODES a protein that exhibits prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN prostaglandin transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN basal plasma membrane (ortholog) 8 94353187 94387744 + 22301074;30032202 116907394 MODEL JAAIVD010000027;XM_032910347 XP_032766238 protein-coding 625900484 Parp8 poly(ADP-ribose) polymerase family member 8 ENCODES a protein that exhibits NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation 3 180406620 180572381 - 22301074;30032202 116897176 MODEL JAAIVD010000012;XM_032898861 XP_032754752 protein mono-ADP-ribosyltransferase PARP8 protein-coding 625900515 Rpl32 ribosomal protein L32 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 6 30903932 30907554 + 22301074;30032202 116903378 MODEL JAAIVD010000024;XM_032905866 XP_032761757 60S ribosomal protein L32 protein-coding 625900523 Inca1 inhibitor of CDK, cyclin A1 interacting protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); negative regulation of fibroblast proliferation (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 50299194 50310512 - 30032202 116909533 MODEL JAAIVD010000002;XM_032913147 XP_032769038 protein INCA1 protein-coding 625900534 Ctxnd1 cortexin domain containing 1 ASSOCIATED WITH megacolon (ortholog) 2 115795433 115840917 - 116891876 MODEL JAAIVD010000001;XM_032893281;XM_032893282 XP_032749172;XP_032749173 cortexin domain-containing 1 protein-coding 625900544 Mrps6 mitochondrial ribosomal protein S6 ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 4 52502274 52558168 - 22301074;30032202 116898350 MODEL JAAIVD010000003;XM_032899669 XP_032755560 28S ribosomal protein S6, mitochondrial protein-coding 625900551 LOC116884413 ferritin heavy chain-like 15 71953147 71953815 - 116884413 MODEL JAAIVD010000010 pseudo 625900552 Tmem102 transmembrane protein 102 INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of T cell chemotaxis (ortholog); positive regulation of T cell migration (ortholog); FOUND IN cell surface (ortholog); protein-containing complex (ortholog) 9 49409594 49411690 - 116908974 MODEL JAAIVD010000002;XM_032912437 XP_032768328 protein-coding 625900558 Snai2 snail family transcriptional repressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage morphogenesis (ortholog); cell migration involved in endocardial cushion formation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); calcinosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 149252 152559 + 30032202 116897744 MODEL JAAIVD010000003;XM_032899182 XP_032755073 zinc finger protein SNAI2 protein-coding 625900564 Chrna4 cholinergic receptor nicotinic alpha 4 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); B cell activation (ortholog); behavioral response to nicotine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 5 158126017 158146658 - 22301074;30032202 116902427 MODEL JAAIVD010000023;XM_032904957;XM_032904958 XP_032760848;XP_032760849 neuronal acetylcholine receptor subunit alpha-4 protein-coding 625900580 Xrcc4 X-ray repair cross complementing 4 ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to lithium ion (ortholog); central nervous system development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Chromosome Aberrations (ortholog); genetic disease (ortholog); isolated growth hormone deficiency type IA (ortholog); FOUND IN chromosome, telomeric region (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) 3 206225342 206440257 + 22301074;30032202 116897310 MODEL JAAIVD010000012;XM_032899059 XP_032754950 DNA repair protein XRCC4 protein-coding 625900592 Mamstr MEF2 activating motif and SAP domain containing transcriptional regulator INVOLVED IN positive regulation of myotube differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 153875247 153879252 - 30032202 116892135 MODEL JAAIVD010000001;XM_032893624;XM_032893625 XP_032749515;XP_032749516 MEF2-activating motif and SAP domain-containing transcriptional regulator protein-coding 625900607 LOC116893702 aflatoxin B1 aldehyde reductase member 3 1 18841195 18848800 - 22301074 116893702 MODEL JAAIVD010000025;XM_032895422 XP_032751313 protein-coding 625900618 LOC116887626 olfactory receptor 11A1-like 18 10370975 10371535 - 116887626 MODEL JAAIVD010000013 pseudo 625900619 Bclaf1 BCL2 associated transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); Fraser syndrome 3 (ortholog); lung small cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 216242335 216271299 - 30032202 116892974 MODEL JAAIVD010000001;XM_032894933 XP_032750824 bcl-2-associated transcription factor 1 protein-coding 625900637 LOC116910262 leucine-rich repeat-containing protein 37A-like 9 32416286 32442985 - 116910262 MODEL JAAIVD010000002;XM_032914146 XP_032770037 protein-coding 625900651 LOC116890346 U6 spliceosomal RNA 1 34601536 34601639 - 116890346 MODEL JAAIVD010000025;XR_004386568 snrna 625900654 LOC116912389 uncharacterized LOC116912389 11 91233059 91241728 - 116912389 MODEL JAAIVD010000006;XR_004389454 ncrna 625900659 Atp6v1e2 ATPase H+ transporting V1 subunit E2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); FOUND IN acrosomal vesicle (ortholog) 7 6039488 6043492 + 22301074;30032202 116905536 MODEL JAAIVD010000026;XM_032908574;XM_032908575 XP_032764465;XP_032764466 V-type proton ATPase subunit E 2 protein-coding 625900670 Spcs2 signal peptidase complex subunit 2 INVOLVED IN signal peptide processing (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 2 98119495 98137164 - 22301074;30032202 116891730 MODEL JAAIVD010000001;XM_032893027 XP_032748918 protein-coding 625900679 Limk1 LIM domain kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); protein serine/threonine kinase activity (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); positive regulation of axon extension (ortholog); positive regulation of stress fiber assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH High Myopia (ortholog); myoclonic-atonic epilepsy (ortholog); Williams-Beuren syndrome (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 19369419 19403164 + 22301074;30032202 116885523 MODEL JAAIVD010000004;XM_032886820 XP_032742711 protein-coding 625900699 LOC116892511 LYR motif-containing protein 1-like 1 10242006 10242621 - 116892511 MODEL JAAIVD010000025 pseudo 625900700 LOC116893674 olfactory receptor 5A1-like 2 12226996 12227949 - 22301074;30032202 116893674 MODEL JAAIVD010000001;XM_032895390 XP_032751281 protein-coding 625900703 LOC116913306 uncharacterized LOC116913306 12 69496794 69509277 + 116913306 MODEL JAAIVD010000007;XR_004389603 ncrna 625900707 LOC116892782 vomeronasal type-2 receptor 116-like 2 185283030 185305098 - 22301074;30032202 116892782 MODEL JAAIVD010000001;XM_032894656 XP_032750547 protein-coding 625900715 LOC116893230 60S ribosomal protein L7-like 2 117133101 117144324 + 116893230 MODEL JAAIVD010000001 pseudo 625900716 LOC116902802 putative vomeronasal receptor-like protein 4 6 83672096 83673034 - 116902802 MODEL JAAIVD010000024 pseudo 625900717 LOC116900597 gamma-aminobutyric acid receptor-associated protein-like 5 98025213 98025568 + 116900597 MODEL JAAIVD010000023 pseudo 625900718 LOC116895998 60S ribosomal protein L7a-like 3 167730127 167736366 - 116895998 MODEL JAAIVD010000012 pseudo 625900719 Vac14 VAC14 component of PIKFYVE complex ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); myoepithelioma (ortholog); neurodegenerative disease (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); presynaptic endosome (ortholog) 17 30326767 30428704 + 30032202 116886108 MODEL JAAIVD010000011;XM_032887440 XP_032743331 protein VAC14 homolog protein-coding 625900742 Pum3 pumilio RNA binding family member 3 FOUND IN chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) 2 27466722 27501408 - 30032202 116891061 MODEL JAAIVD010000001;XM_032891759;XM_032891760 XP_032747650;XP_032747651 pumilio homolog 3 protein-coding 625900769 LOC116894098 olfactory receptor 688-like 2 103426827 103427795 + 22301074 116894098 MODEL JAAIVD010000001;XM_032895818 XP_032751709 protein-coding 625900773 LOC116900128 olfactory receptor 50-like 5 14494025 14494966 + 22301074;30032202 116900128 MODEL JAAIVD010000023;XM_032901902 XP_032757793 protein-coding 625900776 LOC116913296 olfactory receptor 5AU1 12 71854844 71855779 + 22301074;30032202 116913296 MODEL JAAIVD010000007;XM_032917424 XP_032773315 protein-coding 625900779 Dcxr dicarbonyl and L-xylulose reductase ENCODES a protein that exhibits identical protein binding (ortholog); L-xylulose reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on CH-OH group of donors (ortholog); INVOLVED IN D-glucuronate catabolic process to D-xylulose 5-phosphate (ortholog); glucose metabolic process (ortholog); NADP+ metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); obesity (ortholog); pentosuria (ortholog); FOUND IN brush border (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) 9 63291288 63293170 + 30032202 116909843 MODEL JAAIVD010000002;XM_032913569 XP_032769460 L-xylulose reductase protein-coding 625900791 LOC116908704 serine protease 28-like 9 2577629 2579936 + 22301074;30032202 116908704 MODEL JAAIVD010000002;XM_032912037 XP_032767928 protein-coding 625900798 Rpl4 ribosomal protein L4 ENCODES a protein that exhibits 5S rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN brainstem development (ortholog); cell differentiation (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); High Myopia (ortholog); Sepsis (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 58478448 58483412 + 22301074;30032202 116906770 MODEL JAAIVD010000027;XM_032909612 XP_032765503 60S ribosomal protein L4 protein-coding 625900812 Dimt1 DIM1 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase activity (ortholog); rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 190651655 190676763 - 22301074;30032202 116897214 MODEL JAAIVD010000012;XM_032898927;XM_032898928;XM_032898930;XM_032898931 XP_032754818;XP_032754819;XP_032754821;XP_032754822 DIMT1 rRNA methyltransferase and ribosome maturation factor;probable dimethyladenosine transferase protein-coding 625900840 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92704245 92704316 + 116904840 MODEL JAAIVD010000024 trna 625900841 LOC116889067 prohibitin-like X 37467941 37468705 - 116889067 MODEL JAAIVD010000014 pseudo 625900842 LOC116904302 40S ribosomal protein S17-like 6 46653507 46653961 + 22301074;30032202 116904302 MODEL JAAIVD010000024;XM_032907221 XP_032763112 protein-coding 625900846 LOC116907941 olfactory receptor 7G2-like 8 75725929 75726858 - 22301074;30032202 116907941 MODEL JAAIVD010000027;XM_032911162 XP_032767053 protein-coding 625900849 Fstl4 follistatin like 4 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); INVOLVED IN negative regulation of brain-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of collateral sprouting (ortholog); negative regulation of dendritic spine development (ortholog); FOUND IN secretory granule (ortholog) 9 35242029 35675156 + 22301074;30032202 116908671 MODEL JAAIVD010000002;XM_032911962 XP_032767853 follistatin-related protein 4 protein-coding 625900869 LOC116911348 epoxide hydrolase 1 10 59310095 59339282 - 30032202 116911348 MODEL JAAIVD010000005;XM_032915267;XM_032915268 XP_032771158;XP_032771159 protein-coding 625900885 Myl11 myosin light chain 11 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN immune response (ortholog); muscle contraction (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH distal arthrogryposis (ortholog); distal arthrogryposis type 1C (ortholog) 2 74675414 74680731 - 22301074;30032202 116891484 MODEL JAAIVD010000001;XM_032892588 XP_032748479 Mylpf myosin light chain, phosphorylatable, fast skeletal muscle;myosin regulatory light chain 2, skeletal muscle isoform protein-coding 625900896 LOC116909229 60S ribosomal protein L31-like 9 9274201 9274554 + 22301074;30032202 116909229 MODEL JAAIVD010000002;XM_032912732 XP_032768623 protein-coding 625900899 Slc39a3 solute carrier family 39 member 3 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); FOUND IN apical plasma membrane (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) 1 153852472 153858736 + 30032202 116904621 MODEL JAAIVD010000025;XM_032907415 XP_032763306 zinc transporter ZIP3 protein-coding 625900906 LOC116913613 olfactory receptor 146-like 12 46580 47515 - 22301074;30032202 116913613 MODEL JAAIVD010000007;XM_032917864 XP_032773755 protein-coding 625900909 Npr3 natriuretic peptide receptor 3 ENCODES a protein that exhibits chloride ion binding (ortholog); G protein-coupled peptide receptor activity (ortholog); hormone binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN C-type natriuretic peptide signaling pathway; natriuretic peptide signaling pathway; ASSOCIATED WITH bone disease (ortholog); BOUDIN-MORTIER SYNDROME (ortholog); diabetic retinopathy (ortholog); FOUND IN protein-containing complex (ortholog) 3 169162879 169223328 + 22301074;30032202 116897121 MODEL JAAIVD010000012;XM_032898772;XM_032898773 XP_032754663;XP_032754664 atrial natriuretic peptide receptor 3 protein-coding 625900923 P4htm prolyl 4-hydroxylase, transmembrane ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); INVOLVED IN regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); HYPOTONIA, HYPERVENTILATION, IMPAIRED INTELLECTUAL DEVELOPMENT, DYSAUTONOMIA, EPILEPSY, AND EYE ABNORMALITIES (ortholog); intellectual disability (ortholog) 8 99908552 99926266 - 22301074;30032202 116907601 MODEL JAAIVD010000027;XM_032910651;XR_004388828 XP_032766542 transmembrane prolyl 4-hydroxylase protein-coding 625900939 Tmtc1 transmembrane O-mannosyltransferase targeting cadherins 1 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 6 5873166 5975697 - 22301074;30032202 116903105 MODEL JAAIVD010000024;XM_032905430;XM_032905431 XP_032761321;XP_032761322 protein O-mannosyl-transferase TMTC1 protein-coding 625900958 Trappc11 trafficking protein particle complex subunit 11 INVOLVED IN constitutive secretory pathway (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 23 (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2S (ortholog); FOUND IN Golgi apparatus (ortholog); TRAPP complex (ortholog) 13 40505580 40551087 + 116914386 MODEL JAAIVD010000008;XM_032918601 XP_032774492 trafficking protein particle complex 11 protein-coding 625900992 Mrpl19 mitochondrial ribosomal protein L19 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleus (ortholog) 6 64151296 64155567 + 22301074;30032202 116903652 MODEL JAAIVD010000024;XM_032906308 XP_032762199 39S ribosomal protein L19, mitochondrial protein-coding 625901001 LOC116912149 PRAME family member 18-like 11 48663874 48665190 - 116912149 MODEL JAAIVD010000006 pseudo 625901002 Akr1b1 aldo-keto reductase family 1 member B ENCODES a protein that exhibits aldose reductase (NADPH) activity (ortholog); cis-1,2-dihydro-1,2-dihydroxynaphthalene dehydrogenase activity (ortholog); glyceraldehyde oxidoreductase activity (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to methylglyoxal (ortholog); PARTICIPATES IN D-glycericacidemia pathway; dopa responsive dystonia pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Albuminuria (ortholog); allergic disease (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); mast cell granule (ortholog) 6 105361740 105375618 + 30032202 116903980 MODEL JAAIVD010000024;XM_032906788 XP_032762679 aldo-keto reductase family 1 member B1 protein-coding 625901016 LOC116902318 uncharacterized LOC116902318 5 150910659 150913338 - 116902318 MODEL JAAIVD010000023;XR_004388062 ncrna 625901021 Wdr70 WD repeat domain 70 ENCODES a protein that exhibits enzyme binding (ortholog) 3 172410722 172637248 + 22301074;30032202 116897143 MODEL JAAIVD010000012;XM_032898806;XM_032898807 XP_032754697;XP_032754698 WD repeat-containing protein 70 protein-coding 625901048 LOC116902056 glucose-6-phosphate 1-dehydrogenase-like 5 125453727 125456009 + 22301074;30032202 116902056 MODEL JAAIVD010000023;XM_032904346 XP_032760237 protein-coding 625901053 Caap1 caspase activity and apoptosis inhibitor 1 INVOLVED IN negative regulation of apoptotic process (ortholog) 2 160262698 160268320 + 116893357 MODEL JAAIVD010000001;XM_032895162 XP_032751053 protein-coding 625901058 LOC116904016 potassium voltage-gated channel subfamily B member 2 1 150132658 150136035 + 22301074;30032202 116904016 MODEL JAAIVD010000025;XM_032906841 XP_032762732 protein-coding 625901063 Ppp1r3a protein phosphatase 1 regulatory subunit 3A PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH diabetes mellitus (ortholog); hypoglycemia (ortholog); Insulin Resistance (ortholog) 3 184358971 184395577 + 30032202 116897190 MODEL JAAIVD010000012;XM_032898884;XM_032898885 XP_032754775;XP_032754776 protein-coding 625901071 LOC116912256 UDP-glucuronosyltransferase 2A3 11 1458432 1471041 + 22301074 116912256 MODEL JAAIVD010000006;XM_032916241 XP_032772132 protein-coding 625901079 LOC116885649 40S ribosomal protein S25-like 16 24314965 24315323 - 116885649 MODEL JAAIVD010000004 pseudo 625901080 Mc2r melanocortin 2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); placenta development (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Disorders of Environmental Origin (ortholog); genetic disease (ortholog) 15 62859297 62869995 + 22301074 116884872 MODEL JAAIVD010000010;XM_032886112;XM_032886114;XM_032886115 XP_032742003;XP_032742005;XP_032742006 adrenocorticotropic hormone receptor protein-coding 625901095 Gnai2 G protein subunit alpha i2 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cell division (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; angiotensin II signaling pathway via AT2 receptor; dopamine signaling pathway via D2 family of receptors; ASSOCIATED WITH Adrenal Cortex Neoplasms (ortholog); Animal Mammary Neoplasms (ortholog); atrioventricular block (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 8 98933255 98953806 - 22301074;30032202 116907538 MODEL JAAIVD010000027;XM_032910556;XM_032910557 XP_032766447;XP_032766448 guanine nucleotide-binding protein G(i) subunit alpha-2 protein-coding 625901111 LOC116900448 olfactory receptor 4A5-like 5 70998215 70999132 + 22301074 116900448 MODEL JAAIVD010000023;XM_032902189 XP_032758080 protein-coding 625901114 LOC116907373 olfactory receptor 145-like 8 31685599 31686543 + 22301074;30032202 116907373 MODEL JAAIVD010000027;XM_032910326 XP_032766217 protein-coding 625901117 Sct secretin ENCODES a protein that exhibits digestive hormone activity (ortholog); G protein-coupled receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); dentate gyrus development (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); choledochal cyst (ortholog); polycystic ovary syndrome (ortholog); FOUND IN extracellular space (ortholog) 2 8199662 8200531 + 22301074;30032202 116893621 MODEL JAAIVD010000001;XM_032895335 XP_032751226 protein-coding 625901125 LOC116905210 uncharacterized LOC116905210 7 94198919 94199464 + 116905210 MODEL JAAIVD010000026;XR_004388499 ncrna 625901129 Nus1 NUS1 dehydrodolichyl diphosphate synthase subunit ENCODES a protein that exhibits ditrans,polycis-polyprenyl diphosphate synthase [(2E,6E)-farnesyl diphosphate specific] activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dolichyl diphosphate biosynthetic process (ortholog); obsolete dolichol biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant intellectual developmental disorder 55 (ortholog); bilateral perisylvian polymicrogyria (ortholog); FOUND IN dehydrodolichyl diphosphate synthase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 18 29527656 29551794 - 30032202 116887226 MODEL JAAIVD010000013;XM_032888788 XP_032744679 dehydrodolichyl diphosphate synthase complex subunit NUS1 protein-coding 625901138 LOC116899046 uncharacterized LOC116899046 4 64412824 64417701 - 116899046 MODEL JAAIVD010000003;XR_004387684 ncrna 625901142 LOC116893496 zinc finger SWIM domain-containing protein 5-like 2 183135090 183139330 - 116893496 MODEL JAAIVD010000001 pseudo 625901143 Tbc1d19 TBC1 domain family member 19 INVOLVED IN regulation of cilium assembly (ortholog) 11 52236245 52354724 - 116912100 MODEL JAAIVD010000006;XM_032915995 XP_032771886 protein-coding 625901168 LOC116905654 phosphoglycerate mutase 1-like 7 40376450 40377160 - 116905654 MODEL JAAIVD010000026 pseudo 625901169 Zdhhc8 zDHHC palmitoyltransferase 8 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN locomotory behavior (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of cholesterol efflux (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 4 3489515 3504160 - 22301074;30032202 116898663 MODEL JAAIVD010000003;XM_032899898;XM_032899899 XP_032755789;XP_032755790 probable palmitoyltransferase ZDHHC8;zinc finger DHHC-type palmitoyltransferase 8 protein-coding 625901187 LOC116905623 partner of Y14 and mago-like 7 19155825 19168001 + 116905623 MODEL JAAIVD010000026 pseudo 625901188 LOC116904801 U4 spliceosomal RNA 6 27726933 27727061 - 116904801 MODEL JAAIVD010000024 pseudo 625901189 Fam222b family with sequence similarity 222 member B FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 9 92282606 92347186 - 116908634 MODEL JAAIVD010000002;XM_032911889 XP_032767780 protein FAM222B protein-coding 625901196 LOC116890224 histone deacetylase 1-like 1 268889701 268891046 - 116890224 MODEL JAAIVD010000025 pseudo 625901197 Dnajb6 DnaJ heat shock protein family (Hsp40) member B6 ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); chorio-allantoic fusion (ortholog); chorion development (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy (ortholog); autosomal dominant limb-girdle muscular dystrophy type 1 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 158692658 158757583 - 30032202 116904246 MODEL JAAIVD010000024;XM_032907201;XM_032907202;XM_032907203;XM_032907204 XP_032763092;XP_032763093;XP_032763094;XP_032763095 dnaJ homolog subfamily B member 6 protein-coding 625901217 LOC116908368 small nucleolar RNA SNORA43 8 100722539 100722676 - 116908368 MODEL JAAIVD010000027;XR_004388917 snorna 625901220 Magt1 magnesium transporter 1 INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Icc (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) X 65532194 65564961 - 30032202 116887959 MODEL JAAIVD010000014;XM_032889404 XP_032745295 magnesium transporter protein 1 protein-coding 625901232 LOC116897293 PRELI domain containing protein 3B 3 203124528 203125455 + 30032202 116897293 MODEL JAAIVD010000012;XM_032899025 XP_032754916 protein-coding 625901237 LOC116894056 olfactory receptor 51F1 2 102772443 102773402 - 22301074 116894056 MODEL JAAIVD010000001;XM_032895778 XP_032751669 protein-coding 625901240 LOC116884370 replication protein A 70 kDa DNA-binding subunit-like 15 44085658 44087484 - 116884370 MODEL JAAIVD010000010 pseudo 625901241 LOC116894315 stress-induced-phosphoprotein 1-like 2 148425010 148426634 - 116894315 MODEL JAAIVD010000001 pseudo 625901242 Fbxw11 F-box and WD repeat domain containing 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN Hedgehog signaling pathway; mTOR signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL, JAW, EYE, AND DIGITAL SYNDROME (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 5488288 5584910 + 22301074 116910207 MODEL JAAIVD010000002;XM_032914072;XM_032914073;XM_032914074;XM_032914075;XM_032914076;XM_032914077;XM_032914078;XM_032914080;XM_032914081;XM_032914082 XP_032769963;XP_032769964;XP_032769965;XP_032769966;XP_032769967;XP_032769968;XP_032769969;XP_032769971;XP_032769972;XP_032769973 F-box/WD repeat-containing protein 11 protein-coding 625901282 Gtpbp10 GTP binding protein 10 FOUND IN mitochondrion (ortholog) 6 137796003 137813993 - 22301074;30032202 116904131 MODEL JAAIVD010000024;XM_032907017 XP_032762908 GTP-binding protein 10 protein-coding 625901296 LOC116908143 nucleolar protein 16-like 8 26997128 26997657 + 116908143 MODEL JAAIVD010000027 pseudo 625901297 Dctn5 dynactin subunit 5 INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); ventricular septum development (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 2 79679678 79697012 - 116891557 MODEL JAAIVD010000001;XM_032892730 XP_032748621 protein-coding 625901307 Fam114a2 family with sequence similarity 114 member A2 9 40712836 40746639 + 116908632 MODEL JAAIVD010000002;XM_032911882;XM_032911884;XM_032911885;XM_032911886 XP_032767773;XP_032767775;XP_032767776;XP_032767777 protein FAM114A2 protein-coding 625901334 Sun1 Sad1 and UNC84 domain containing 1 ENCODES a protein that exhibits cytoskeleton-nuclear membrane anchor activity (ortholog); identical protein binding (ortholog); lamin binding (ortholog); INVOLVED IN centrosome localization (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); progeria (ortholog); FOUND IN acrosomal membrane (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 16 13950912 13995560 - 30032202 116885960 MODEL JAAIVD010000004;XM_032887278;XM_032887279;XM_032887280;XM_032887281;XM_032887282;XM_032887283;XM_032887284;XM_032887285;XM_032887286;XM_032887287;XM_032887288;XM_032887289;XM_032887290;XM_032887292;XM_032887293;XM_032887294;XM_032887295;XM_032887296;XM_032887297;XM_032887298 XP_032743169;XP_032743170;XP_032743171;XP_032743172;XP_032743173;XP_032743174;XP_032743175;XP_032743176;XP_032743177;XP_032743178;XP_032743179;XP_032743180;XP_032743181;XP_032743183;XP_032743184;XP_032743185;XP_032743186;XP_032743187;XP_032743188;XP_032743189 SUN domain-containing protein 1 protein-coding 625901403 LOC116892726 olfactory receptor 2A1/2A42-like 2 179657837 179658802 - 22301074 116892726 MODEL JAAIVD010000001;XM_032894600 XP_032750491 protein-coding 625901406 Foxq1 forkhead box Q1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN hair follicle morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 14 50573651 50576627 + 30032202 116883862 MODEL AF153193;JAAIVD010000009;XM_032885129 AAF73234;XP_032741020 Hfh1 forkhead box protein Q1;winged helix/forkhead transcription factor HFH1 protein-coding 625901411 Ing2 inhibitor of growth family member 2 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male germ-line stem cell asymmetric division (ortholog); male meiosis I (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 40351317 40358215 + 30032202 116914635 MODEL JAAIVD010000008;XM_032919025;XM_032919026 XP_032774916;XP_032774917 inhibitor of growth protein 2 protein-coding 625901422 LOC116914053 uncharacterized LOC116914053 12 40041048 40048546 + 116914053 MODEL JAAIVD010000007;XR_004389662 ncrna 625901428 LOC116908792 NHP2-like protein 1 9 72643885 72645046 - 22301074;30032202 116908792 MODEL JAAIVD010000002;XM_032912185 XP_032768076 protein-coding 625901433 LOC116913587 granzyme G-like 12 68884362 68887303 + 22301074;30032202 116913587 MODEL JAAIVD010000007;XM_032917816 XP_032773707 protein-coding 625901441 LOC116895004 small nucleolar RNA SNORA33 2 209856727 209856855 - 116895004 MODEL JAAIVD010000001;XR_004387192 snorna 625901444 LOC116910769 U6 spliceosomal RNA 9 62135886 62135992 + 116910769 MODEL JAAIVD010000002;XR_004389277 snrna 625901447 LOC116883958 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase-like 14 22838678 22839224 + 116883958 MODEL JAAIVD010000009 pseudo 625901448 Knl1 kinetochore scaffold 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); kinetochore (ortholog) 5 97219719 97281532 + 22301074;30032202 116901794 MODEL JAAIVD010000023;XM_032903948;XM_032903949 XP_032759839;XP_032759840 protein-coding 625901481 LOC116897386 U6 spliceosomal RNA 3 107710222 107710328 + 116897386 MODEL JAAIVD010000012;XR_004387430 snrna 625901484 LOC116885031 small nucleolar RNA SNORA33 15 33573794 33573922 + 116885031 MODEL JAAIVD010000010;XR_004385918 snorna 625901487 LOC116883630 serpin B9-like 14 52065990 52080554 + 22301074;30032202 116883630 MODEL JAAIVD010000009;XM_032884820;XM_032884821 XP_032740711;XP_032740712 protein-coding 625901502 Gad1 glutamate decarboxylase 1 ENCODES a protein that exhibits glutamate binding (ortholog); glutamate decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to serotonin (ortholog); gamma-aminobutyric acid biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-alanine metabolic pathway; Canavan disease pathway; ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell cortex (ortholog) 5 47884041 47924975 + 22301074;30032202 116901496 MODEL JAAIVD010000023;XM_032903463 XP_032759354 protein-coding 625901523 LOC116893378 potassium channel subfamily K member 6-like 2 166764644 166770934 + 116893378 MODEL JAAIVD010000001 pseudo 625901524 LOC116887737 small nucleolar RNA SNORA17 18 35306158 35306272 + 116887737 MODEL JAAIVD010000013 pseudo 625901525 Mrps25 mitochondrial ribosomal protein S25 ASSOCIATED WITH combined oxidative phosphorylation deficiency 50 (ortholog); FOUND IN mitochondrion (ortholog) 6 54781966 54793804 + 30032202 116903490 MODEL JAAIVD010000024;XM_032906068 XP_032761959 28S ribosomal protein S25, mitochondrial protein-coding 625901533 Fstl1 follistatin like 1 INVOLVED IN endothelial cell differentiation (ortholog); endothelial cell migration (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); aortic valve insufficiency (ortholog); Experimental Liver Cirrhosis (ortholog) 4 22746832 22800097 + 22301074;30032202 116898835 MODEL JAAIVD010000003;XM_032900188 XP_032756079 follistatin-related protein 1 protein-coding 625901548 LOC116900168 L-lactate dehydrogenase A chain-like 5 29775683 29776848 - 116900168 MODEL JAAIVD010000023 pseudo 625901549 LOC116902485 U6 spliceosomal RNA 5 51961054 51961155 + 116902485 MODEL JAAIVD010000023;XR_004388101 snrna 625901552 Rttn rotatin INVOLVED IN determination of left/right symmetry (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Microcephaly, Short Stature, and Polymicrogyria with or without Seizures (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 43626883 43794257 - 30032202 116884449 MODEL JAAIVD010000010;XM_032885543;XM_032885544;XM_032885545;XM_032885546;XM_032885547;XM_032885548 XP_032741434;XP_032741435;XP_032741436;XP_032741437;XP_032741438;XP_032741439 protein-coding 625901615 Naa38 N-alpha-acetyltransferase 38, NatC auxiliary subunit INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytoplasm (ortholog); NatC complex (ortholog); nucleoplasm (ortholog) 9 49007753 49008919 + 22301074 116910606 MODEL JAAIVD010000002;XM_032914548;XM_032914549;XR_004389164 XP_032770439;XP_032770440 protein-coding 625901629 Kiss1r KISS1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); neuropeptide binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); central precocious puberty 1 (ortholog); cryptorchidism (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); membrane (ortholog) 1 154953102 154956826 - 22301074;30032202 116889863 MODEL JAAIVD010000025;XM_032890689 XP_032746580 kiSS-1 receptor protein-coding 625901638 Iqsec3 IQ motif and Sec7 domain ArfGEF 3 INVOLVED IN activation of GTPase activity (ortholog); postsynapse organization (ortholog); regulation of small GTPase mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); GABA-ergic synapse (ortholog); glycinergic synapse (ortholog) 6 25265976 25361399 + 22301074;30032202 116903316 MODEL JAAIVD010000024;XM_032905750 XP_032761641 IQ motif and SEC7 domain-containing protein 3 protein-coding 625901656 Tm4sf1 transmembrane 4 L six family member 1 INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 7 78090163 78099218 + 22301074;30032202 116905094 MODEL JAAIVD010000026;XM_032907817 XP_032763708 transmembrane 4 L6 family member 1 protein-coding 625901665 Cenpi centromere protein I INVOLVED IN follicle-stimulating hormone signaling pathway (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN inner kinetochore (ortholog); kinetochore (ortholog); nuclear body (ortholog) X 86646592 86691529 + 22301074 116888045 MODEL JAAIVD010000014;XM_032889441 XP_032745332 protein-coding 625901683 LOC116910530 keratin-associated protein 3-2 9 54382260 54382559 - 22301074;30032202 116910530 MODEL JAAIVD010000002;XM_032914434 XP_032770325 protein-coding 625901686 LOC116908416 U1 spliceosomal RNA 8 78724282 78724447 + 116908416 MODEL JAAIVD010000027;XR_004388955 snrna 625901689 Fth1 ferritin heavy chain 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); ferroxidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN iron ion transport (ortholog); negative regulation of cellular process (ortholog); negative regulation of ferroptosis (ortholog); PARTICIPATES IN iron storage pathway; ASSOCIATED WITH Chronic Cerebral Hypoperfusion (ortholog); congestive heart failure (ortholog); contact dermatitis (ortholog); FOUND IN autolysosome (ortholog); cytosol (ortholog); membrane (ortholog) 2 151225905 151228305 - 22301074;30032202 116893302 MODEL JAAIVD010000001;XM_032895130 XP_032751021 ferritin heavy chain protein-coding 625901696 Trim45 tripartite motif containing 45 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bone development (ortholog); inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 3 57137234 57146087 - 22301074;30032202 116896465 MODEL JAAIVD010000012;XM_032897627 XP_032753518 tripartite motif-containing protein 45 protein-coding 625901706 LOC116893829 60S ribosomal protein L7a 2 55668385 55669265 - 22301074 116893829 MODEL JAAIVD010000001;XM_032895547 XP_032751438 protein-coding 625901711 Endod1 endonuclease domain containing 1 8 10181324 10211467 - 22301074 116906856 MODEL JAAIVD010000027;XM_032909754 XP_032765645 endonuclease domain-containing 1 protein protein-coding 625901717 LOC116894885 U6 spliceosomal RNA 2 228380929 228381032 - 116894885 MODEL JAAIVD010000001;XR_004387094 snrna 625901720 Lrrc53 leucine rich repeat containing 53 3 6606149 6617721 - 22301074;30032202 116895155 MODEL JAAIVD010000012;XM_032896522 XP_032752413 leucine-rich repeat-containing protein 53 protein-coding 625901728 Fbxo9 F-box protein 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); fat cell differentiation (ortholog); innate immune response (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 8 72334729 72359255 - 22301074;30032202 116908308 MODEL JAAIVD010000027;XM_032911588 XP_032767479 F-box only protein 9 protein-coding 625901745 Maml2 mastermind like transcriptional coactivator 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN Notch signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN nucleus (ortholog) 8 9260949 9579582 + 22301074;30032202 116907644 MODEL JAAIVD010000027;XM_032910711 XP_032766602 mastermind-like protein 2 protein-coding 625901754 LOC116900387 olfactory receptor 5D18-like 5 69700959 69701909 - 22301074;30032202 116900387 MODEL JAAIVD010000023;XM_032902134 XP_032758025 protein-coding 625901757 LOC116905271 E3 ubiquitin-protein ligase RNF113A 7 98528391 98529757 + 22301074;30032202 116905271 MODEL JAAIVD010000026;XM_032908123 XP_032764014 protein-coding 625901762 Rbp2 retinol binding protein 2 ENCODES a protein that exhibits binding (ortholog); lipid binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); PARTICIPATES IN retinol metabolic pathway; FOUND IN cytosol (ortholog); synaptic ribbon (ortholog) 8 89858382 89878633 + 30032202 116907075 MODEL JAAIVD010000027;XM_032910029 XP_032765920 retinol-binding protein 2 protein-coding 625901770 LOC116893706 olfactory receptor 5B3-like 2 13310310 13311248 - 22301074;30032202 116893706 MODEL JAAIVD010000001;XM_032895423 XP_032751314 protein-coding 625901773 LOC116895939 hydroxyacyl-thioester dehydratase type 2, mitochondrial-like 3 131974289 131974740 - 116895939 MODEL JAAIVD010000012 pseudo 625901774 Slc25a27 solute carrier family 25 member 27 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inner ear development (ortholog); intracellular triglyceride homeostasis (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH schizophrenia (ortholog); Spinal Cord Injuries (ortholog); FOUND IN apical part of cell (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 4 86175434 86202203 + 30032202 116899147 MODEL JAAIVD010000003;XM_032900688;XM_032900689;XM_032900690;XM_032900692;XM_032900693;XM_032900694;XM_032900695;XM_032900696;XM_032900697;XM_032900698 XP_032756579;XP_032756580;XP_032756581;XP_032756583;XP_032756584;XP_032756585;XP_032756586;XP_032756587;XP_032756588;XP_032756589 mitochondrial uncoupling protein 4 protein-coding 625901817 LOC116884858 high mobility group protein B1-like 15 41357974 41358487 + 116884858 MODEL JAAIVD010000010 pseudo 625901818 LOC116913917 AFG3-like protein 1 12 28600025 28601051 - 116913917 MODEL JAAIVD010000007 pseudo 625901819 Ccdc24 coiled-coil domain containing 24 1 39149032 39152803 + 116898050 MODEL JAAIVD010000025;XM_032899446;XM_032899454 XP_032755337;XP_032755345 coiled-coil domain-containing protein 24 protein-coding 625901836 LOC116889846 14-3-3 protein theta-like 1 151381898 151382563 - 116889846 MODEL JAAIVD010000025 pseudo 625901837 LOC116904600 mitochondrial import receptor subunit TOM20 homolog 6 24447707 24448138 + 22301074;30032202 116904600 MODEL JAAIVD010000024;XM_032907397 XP_032763288 protein-coding 625901840 LOC116897315 N-acetyltransferase ESCO1-like 3 209915892 209919999 + 30032202 116897315 MODEL JAAIVD010000012;XM_032899071 XP_032754962 protein-coding 625901845 As3mt arsenite methyltransferase ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); response to arsenic-containing substance (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); Birth Weight (ortholog); FOUND IN cytosol (ortholog) 2 46177715 46209116 + 30032202 116891256 MODEL JAAIVD010000001;XM_032892138 XP_032748029 protein-coding 625901858 LOC116909297 myosin-4 9 46839418 46862208 + 22301074;8227143 116909297 MODEL JAAIVD010000002;X72590;XM_032912835;XM_032912836;XM_032912837 CAA51188;XP_032768726;XP_032768727;XP_032768728 2B myosin heavy chain protein-coding 625901908 Acbd6 acyl-CoA binding domain containing 6 ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH PROGRESSIVE MOVEMENT ABNORMALITIES (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 10 34968251 34992705 + 22301074;30032202 116911750 MODEL JAAIVD010000005;XM_032915741 XP_032771632 acyl-CoA-binding domain-containing protein 6 protein-coding 625901916 Ppih peptidylprolyl isomerase H ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN positive regulation of viral genome replication (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); U4/U6 snRNP (ortholog) 1 37641650 37659560 + 22301074;30032202 116897626 MODEL JAAIVD010000025;XM_032899150;XM_032899151;XM_032899152 XP_032755041;XP_032755042;XP_032755043 peptidyl-prolyl cis-trans isomerase H protein-coding 625901935 LOC116890389 U6 spliceosomal RNA 1 195620939 195621042 - 116890389 MODEL JAAIVD010000025;XR_004386595 snrna 625901938 LOC116894686 40S ribosomal protein S10-like 2 212429994 212430511 - 116894686 MODEL JAAIVD010000001 pseudo 625901939 Ica1 islet cell autoantigen 1 ENCODES a protein that exhibits membrane curvature sensor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); Golgi membrane (ortholog) 6 129657781 129793304 + 22301074;30032202 116904077 MODEL JAAIVD010000024;XM_032906941;XM_032906942;XM_032906943;XM_032906944 XP_032762832;XP_032762833;XP_032762834;XP_032762835 protein-coding 625901964 Pogk pogo transposable element derived with KRAB domain FOUND IN nucleoplasm (ortholog) 10 45487734 45500358 - 22301074;30032202 116910862 MODEL JAAIVD010000005;XM_032914622;XM_032914623 XP_032770513;XP_032770514 pogo transposable element with KRAB domain protein-coding 625901977 Ampd1 adenosine monophosphate deaminase 1 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN GMP salvage (ortholog); IMP salvage (ortholog); response to ATP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); autistic disorder (ortholog); congestive heart failure (ortholog) 3 54940654 54963312 - 22301074;30032202 116896449 MODEL JAAIVD010000012;XM_032897604;XM_032897605;XM_032897606 XP_032753495;XP_032753496;XP_032753497 AMP deaminase 1 protein-coding 625902002 LOC116893504 zinc finger protein 595-like 2 186220639 186230377 - 22301074 116893504 MODEL JAAIVD010000001;XM_032895242 XP_032751133 protein-coding 625902008 LOC116887706 uncharacterized LOC116887706 1 55220434 55224965 - 116887706 MODEL JAAIVD010000025;XR_004386234 ncrna 625902012 LOC116908324 U6 spliceosomal RNA 8 67115344 67115448 + 116908324 MODEL JAAIVD010000027;XR_004388881 snrna 625902015 Cystm1 cysteine rich transmembrane module containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 15 7974737 8032937 - 30032202 116885004 MODEL JAAIVD010000010;XM_032886239;XM_032886240;XR_004385912 XP_032742130;XP_032742131 cysteine-rich and transmembrane domain-containing protein 1 protein-coding 625902029 Tmem213 transmembrane protein 213 FOUND IN endoplasmic reticulum membrane (ortholog) 6 101698774 101704731 - 116903956 MODEL JAAIVD010000024;XM_032906743 XP_032762634 protein-coding 625902034 Plbd2 phospholipase B domain containing 2 FOUND IN lysosome (ortholog) 16 33328036 33347950 + 22301074;30032202 116885414 MODEL JAAIVD010000004;XM_032886701 XP_032742592 putative phospholipase B-like 2 protein-coding 625902050 LOC116900147 40S ribosomal protein S16-like 5 15496346 15496801 + 116900147 MODEL JAAIVD010000023 pseudo 625902051 LOC116898560 cuticle protein 63-like 4 155629582 155630073 - 116898560 MODEL JAAIVD010000003;XM_032899768 XP_032755659 protein-coding 625902054 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 124831289 124831361 + 116897673 MODEL JAAIVD010000012 trna 625902055 Mllt10 MLLT10 histone lysine methyltransferase DOT1L cofactor ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 5758511 5884272 - 30032202 116883767 MODEL JAAIVD010000009;XM_032885013 XP_032740904 protein AF-10 protein-coding 625902082 LOC116888608 60S ribosomal protein L21-like 1 96738597 96739079 - 116888608 MODEL JAAIVD010000025 pseudo 625902083 Pamr1 peptidase domain containing associated with muscle regeneration 1 ASSOCIATED WITH congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) 5 80396556 80484379 + 22301074 116901679 MODEL JAAIVD010000023;XM_032903792 XP_032759683 inactive serine protease PAMR1 protein-coding 625902098 LOC116905828 60S ribosomal protein L35-like 7 37428247 37428618 + 22301074;30032202 116905828 MODEL JAAIVD010000026;XM_032908794 XP_032764685 protein-coding 625902101 Plppr2 phospholipid phosphatase related 2 8 18186853 18199368 + 30032202 116906575 MODEL JAAIVD010000027;XM_032909307;XM_032909308;XM_032909309 XP_032765198;XP_032765199;XP_032765200 phospholipid phosphatase-related protein type 2 protein-coding 625902123 LOC116902622 small nucleolar RNA SNORD70 5 6651959 6652042 - 116902622 MODEL JAAIVD010000023;XR_004388200 snorna 625902126 Zbtb34 zinc finger and BTB domain containing 34 ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog) 5 2209976 2232543 + 22301074;30032202 116901120 MODEL JAAIVD010000023;XM_032902696;XM_032902697;XM_032902698;XM_032902699 XP_032758587;XP_032758588;XP_032758589;XP_032758590 zinc finger and BTB domain-containing protein 34 protein-coding 625902143 Nr1d1 nuclear receptor subfamily 1 group D member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); brain small vessel disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 55660965 55668429 + 22301074;30032202 116909736 MODEL JAAIVD010000002;XM_032913414 XP_032769305 protein-coding 625902155 Habp4 hyaluronan binding protein 4 ENCODES a protein that exhibits SUMO binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); PML body organization (ortholog); positive regulation of RNA splicing (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 14 75368272 75390324 - 30032202 116883624 MODEL JAAIVD010000009;XM_032884814 XP_032740705 intracellular hyaluronan-binding protein 4 protein-coding 625902167 Loxl2 lysyl oxidase like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); oligosaccharide binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endothelial cell migration (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); endoplasmic reticulum (ortholog) 12 54636444 54719638 - 22301074;30032202 116914076 MODEL JAAIVD010000007;XM_032918383 XP_032774274 lysyl oxidase homolog 2 protein-coding 625902185 LOC116895453 uncharacterized LOC116895453 3 78116186 78128508 - 116895453 MODEL JAAIVD010000012;XR_004387277 ncrna 625902190 LOC116888677 uncharacterized LOC116888677 X 114049955 114053179 - 116888677 MODEL JAAIVD010000014;XR_004386335 ncrna 625902195 Lrrcc1 leucine rich repeat and coiled-coil centrosomal protein 1 ASSOCIATED WITH basal cell carcinoma (ortholog); Joubert syndrome (ortholog); FOUND IN centrosome (ortholog) 3 157613632 157642601 - 22301074;30032202 116897085 MODEL JAAIVD010000012;XM_032898711;XM_032898712;XM_032898713;XM_032898714;XM_032898715;XM_032898716;XM_032898718 XP_032754602;XP_032754603;XP_032754604;XP_032754605;XP_032754606;XP_032754607;XP_032754609 leucine-rich repeat and coiled-coil domain-containing protein 1 protein-coding 625902231 LOC116905375 transcription and mRNA export factor ENY2-like 1 149355674 149356213 + 116905375 MODEL JAAIVD010000025 pseudo 625902232 LOC116911869 U4 spliceosomal RNA 10 19922803 19922938 - 116911869 MODEL JAAIVD010000005;XR_004389383 snrna 625902235 Fanci FA complementation group I ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH breast cancer (ortholog); colorectal cancer (ortholog); Fanconi anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); DNA repair complex (ortholog) 2 120802684 120858047 - 22301074;30032202 116891943 MODEL JAAIVD010000001;XM_032893383 XP_032749274 Fanconi anemia group I protein protein-coding 625902277 LOC116910636 U6 spliceosomal RNA 9 48506906 48507012 + 116910636 MODEL JAAIVD010000002;XR_004389174 snrna 625902280 Arf5 ARF GTPase 5 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 6 111112050 111114992 - 22301074;30032202 116904028 MODEL JAAIVD010000024;XM_032906858 XP_032762749 ADP ribosylation factor 5;ADP-ribosylation factor 5 protein-coding 625902290 Cass4 Cas scaffold protein family member 4 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN positive regulation of cell migration (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of protein tyrosine kinase activity (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) 5 145567760 145607701 - 22301074;30032202 116900755 MODEL JAAIVD010000023;XM_032902465 XP_032758356 cas scaffolding protein family member 4 protein-coding 625902299 Mreg melanoregulin ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN developmental pigmentation (ortholog); melanocyte differentiation (ortholog); melanosome localization (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); late endosome membrane (ortholog); melanosome (ortholog) 4 145737222 145805073 - 22301074;30032202 116899479 MODEL JAAIVD010000003;XM_032901312;XM_032901313 XP_032757203;XP_032757204 protein-coding 625902311 Camkk2 calcium/calmodulin dependent protein kinase kinase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); CAMKK-AMPK signaling cascade (ortholog); positive regulation of autophagy of mitochondrion (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH high grade glioma (ortholog); Ovarian Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) 16 31045537 31093391 + 22301074;30032202 116885305 MODEL JAAIVD010000004;XM_032886559;XM_032886560 XP_032742450;XP_032742451 calcium/calmodulin-dependent protein kinase kinase 2 protein-coding 625902335 LOC116893175 uncharacterized LOC116893175 2 103388292 103392997 - 116893175 MODEL JAAIVD010000001 pseudo 625902336 LOC116886615 mitogen-activated protein kinase 4-like 17 14514806 14515386 + 116886615 MODEL JAAIVD010000011 pseudo 625902337 LOC116892408 zinc finger protein 780A-like 2 168003348 168021281 + 22301074 116892408 MODEL JAAIVD010000001;XM_032894087 XP_032749978 protein-coding 625902346 Six2 SIX homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); CAKUT (ortholog); chronic kidney disease (ortholog); FOUND IN nucleus (ortholog) 7 7310659 7313982 + 22301074;30032202 116905648 MODEL JAAIVD010000026;XM_032908624 XP_032764515 homeobox protein SIX2 protein-coding 625902351 Jakmip3 Janus kinase and microtubule interacting protein 3 2 62778771 62885356 - 30032202 116891367 MODEL JAAIVD010000001;XM_032892364;XR_004386832 XP_032748255 janus kinase and microtubule-interacting protein 3 protein-coding 625902381 Nrtn neurturin ENCODES a protein that exhibits growth factor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cell surface receptor signaling pathway via STAT (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); keratoconjunctivitis sicca (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog) 4 88124231 88130074 - 22301074;30032202 116898066 MODEL JAAIVD010000003;XM_032899460 XP_032755351 protein-coding 625902388 Spc24 SPC24 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); FOUND IN kinetochore (ortholog); Ndc80 complex (ortholog); nucleolus (ortholog) 8 18023746 18029160 - 116907964 MODEL JAAIVD010000027;XM_032911192 XP_032767083 kinetochore protein Spc24 protein-coding 625902396 Amdhd1 amidohydrolase domain containing 1 PARTICIPATES IN histidine metabolic pathway; histidinemia pathway 1 172577122 172592405 - 22301074;30032202 116889982 MODEL JAAIVD010000025;XM_032890774 XP_032746665 probable imidazolonepropionase protein-coding 625902409 LOC116910095 olfactory receptor 6C6-like 1 161396246 161397172 + 116910095 MODEL JAAIVD010000025 pseudo 625902410 LOC116894468 40S ribosomal protein SA-like 2 167354259 167355094 + 116894468 MODEL JAAIVD010000001 pseudo 625902411 Hr HR lysine demethylase and nuclear receptor corepressor ENCODES a protein that exhibits histone deacetylase binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); nuclear vitamin D receptor binding (ortholog); INVOLVED IN negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH alopecia (ortholog); alopecia universalis (ortholog); atrichia with papular lesions (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 12 53781538 53801231 - 30032202 116913346 MODEL JAAIVD010000007;XM_032917497;XM_032917498 XP_032773388;XP_032773389 lysine-specific demethylase hairless protein-coding 625902438 Grin1 glutamate ionotropic receptor NMDA type subunit 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 5 11867574 11894045 + 22301074;30032202 116901309 MODEL JAAIVD010000023;XM_032903111;XM_032903112;XM_032903113;XM_032903114;XM_032903116;XM_032903117;XM_032903118;XM_032903119 XP_032759002;XP_032759003;XP_032759004;XP_032759005;XP_032759007;XP_032759008;XP_032759009;XP_032759010 glutamate receptor ionotropic, NMDA 1 protein-coding 625902472 Galr1 galanin receptor 1 ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); positive regulation of cortisol secretion (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); depressive disorder (ortholog); major depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) 15 49910860 49926676 + 22301074;30032202 116884765 MODEL JAAIVD010000010;XM_032885982 XP_032741873 galanin receptor type 1 protein-coding 625902479 LOC116910688 small Cajal body-specific RNA 4 9 67900580 67900703 + 116910688 MODEL JAAIVD010000002;XR_004389217 ncrna 625902482 LOC116914945 ral guanine nucleotide dissociation stimulator-like 13 11579019 11581881 - 116914945 MODEL JAAIVD010000008 pseudo 625902483 LOC116899491 40S ribosomal protein S21-like 4 147514345 147514630 + 22301074;30032202 116899491 MODEL JAAIVD010000003;XM_032901324 XP_032757215 protein-coding 625902487 Washc1 WASH complex subunit 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); gamma-tubulin binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); dendritic cell antigen processing and presentation (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN autophagosome (ortholog); BLOC-1 complex (ortholog); centrosome (ortholog) 4 154688397 154691430 - 30032202 116898550 MODEL JAAIVD010000003;XM_032899762 XP_032755653 protein-coding 625902497 LOC116884080 small nucleolar RNA SNORA17 14 8212632 8212764 + 116884080 MODEL JAAIVD010000009;XR_004385825 snorna 625902500 LOC116915172 U6 spliceosomal RNA 13 77879313 77879420 - 116915172 MODEL JAAIVD010000008;XR_004389833 snrna 625902503 Gapdhs glyceraldehyde-3-phosphate dehydrogenase, spermatogenic ENCODES a protein that exhibits glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); spermatid development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); sperm fibrous sheath (ortholog) 2 165272116 165286677 + 22301074;30032202 116892300 MODEL JAAIVD010000001;XM_032893916;XM_032893917;XM_032893918 XP_032749807;XP_032749808;XP_032749809 glyceraldehyde-3-phosphate dehydrogenase, testis-specific protein-coding 625902525 LOC116908430 small nucleolar RNA SNORD5 8 11108863 11108934 + 116908430 MODEL JAAIVD010000027;XR_004388961 snorna 625902528 Nme7 NME/NM23 family member 7 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); nucleoside diphosphate kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gastrointestinal stromal tumor (ortholog); hydrocephalus (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); centrosome (ortholog) 10 43532416 43662125 + 22301074;30032202 116911067 MODEL JAAIVD010000005;XM_032914833;XM_032914834;XM_032914835 XP_032770724;XP_032770725;XP_032770726 nucleoside diphosphate kinase 7 protein-coding 625902554 LOC116906355 small nucleolar RNA SNORD113/SNORD114 family 7 127213977 127214057 + 116906355 MODEL JAAIVD010000026 pseudo 625902555 Nrsn2 neurensin 2 FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 5 131691662 131699887 - 30032202 116902120 MODEL JAAIVD010000023;XM_032904435 XP_032760326 neurensin-2 protein-coding 625902562 LOC116898413 60S ribosomal protein L35-like 4 87637459 87647635 + 116898413 MODEL JAAIVD010000003 pseudo 625902563 LOC116883229 interleukin-19-like 14 55247855 55258274 - 116883229 MODEL JAAIVD010000009 pseudo 625902564 Elp3 elongator acetyltransferase complex subunit 3 ENCODES a protein that exhibits acetyltransferase activity (ortholog); phosphorylase kinase regulator activity (ortholog); INVOLVED IN central nervous system development (ortholog); neuron migration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) 12 58843081 58904060 + 22301074;30032202 116914014 MODEL JAAIVD010000007;XM_032918285;XM_032918286 XP_032774176;XP_032774177 elongator complex protein 3 protein-coding 625902586 Efcab2 EF-hand calcium binding domain 2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN sperm principal piece (ortholog) 10 56748710 56831974 + 22301074 116911070 MODEL JAAIVD010000005;XM_032914838;XM_032914840;XM_032914841;XM_032914842 XP_032770729;XP_032770731;XP_032770732;XP_032770733 dynein regulatory complex protein 8 protein-coding 625902604 LOC116900630 uncharacterized LOC116900630 5 109644632 109657921 - 116900630 MODEL JAAIVD010000023;XR_004387941 ncrna 625902611 LOC116887017 14-3-3 protein theta-like 1 32342245 32342998 - 116887017 MODEL JAAIVD010000025 pseudo 625902612 Slc35g6 solute carrier family 35 member G6 9 49365339 49366178 - 116910306 MODEL JAAIVD010000002;XM_032914171 XP_032770062 protein-coding 625902615 Hoxb13 homeobox B13 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical cancer (ortholog); ductal carcinoma in situ (ortholog); FOUND IN nucleoplasm (ortholog); transcription regulator complex (ortholog) 9 58182465 58184720 - 22301074;30032202 116909960 MODEL JAAIVD010000002;XM_032913736 XP_032769627 homeobox protein Hox-B13 protein-coding 625902621 LOC116888837 non-histone chromosomal protein HMG-17-like X 117476559 117476841 - 116888837 MODEL JAAIVD010000014 pseudo 625902622 Ptcd2 pentatricopeptide repeat domain 2 INVOLVED IN heart development (ortholog); kidney development (ortholog); liver development (ortholog); FOUND IN mitochondrion (ortholog) 3 197231810 197259479 + 22301074;30032202 116897250 MODEL JAAIVD010000012;XM_032898979;XM_032898980 XP_032754870;XP_032754871 pentatricopeptide repeat-containing protein 2, mitochondrial protein-coding 625902639 LOC116901020 eukaryotic translation initiation factor 1-like 5 128581694 128596540 + 22301074;30032202 116901020 MODEL JAAIVD010000023;XM_032902615 XP_032758506 protein-coding 625902644 Skp2 S-phase kinase associated protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to cell-matrix adhesion (ortholog); defense response to virus (ortholog); DNA double-strand break processing (ortholog); PARTICIPATES IN Notch signaling pathway; p53 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); breast cancer (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 171445808 171473472 + 22301074 116897134 MODEL JAAIVD010000012;XM_032898798 XP_032754689 S-phase kinase-associated protein 2 protein-coding 625902658 LOC116894498 phosphatidylethanolamine-binding protein 1-like 2 172616603 172617294 + 116894498 MODEL JAAIVD010000001 pseudo 625902659 Flot2 flotillin 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); negative regulation of amyloid precursor protein catabolic process (ortholog); negative regulation of gene expression (ortholog); FOUND IN acrosomal membrane (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) 9 92386336 92407707 - 30032202 116908797 MODEL JAAIVD010000002;XM_032912193;XM_032912194;XM_032912195;XM_032912197;XM_032912198;XM_032912199 XP_032768084;XP_032768085;XP_032768086;XP_032768088;XP_032768089;XP_032768090 flotillin-2 protein-coding 625902689 Cbx8 chromobox 8 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); single-stranded RNA binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); glioblastoma (ortholog); spastic cerebral palsy (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) 9 64994574 64997078 + 116908713 MODEL JAAIVD010000002;XM_032912052 XP_032767943 chromobox protein homolog 8 protein-coding 625902698 LOC116884116 U6 spliceosomal RNA 14 57250031 57250136 - 116884116 MODEL JAAIVD010000009;XR_004385847 snrna 625902701 LOC116902977 60S ribosomal protein L35-like 6 131931537 131931908 - 22301074;30032202 116902977 MODEL JAAIVD010000024;XM_032905296 XP_032761187 protein-coding 625902704 Tmem218 transmembrane protein 218 ASSOCIATED WITH Joubert syndrome (ortholog); Joubert Syndrome 39 (ortholog); Meckel syndrome 4 (ortholog) 8 33388654 33405415 + 116907705 MODEL JAAIVD010000027;XM_032910827;XM_032910828 XP_032766718;XP_032766719 protein-coding 625902715 LOC116895942 40S ribosomal protein S14-like 3 133204741 133205202 + 116895942 MODEL JAAIVD010000012 pseudo 625902716 LOC116908130 olfactory receptor 8D1-like 8 32665077 32665941 + 116908130 MODEL JAAIVD010000027 pseudo 625902717 Rhebl1 RHEB like 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN positive regulation of NF-kappaB transcription factor activity (ortholog); TOR signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 1 271699198 271702992 - 22301074;30032202 116884876 MODEL JAAIVD010000025;XM_032886122 XP_032742013 GTPase RhebL1 protein-coding 625902729 LOC116895872 PACRG-like protein 3 105148002 105212167 + 116895872 MODEL JAAIVD010000012 pseudo 625902730 LOC116885258 mitochondrial import inner membrane translocase subunit Tim23-like 16 29277988 29278581 - 116885258 MODEL JAAIVD010000004 pseudo 625902731 Myo6 myosin VI ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN actin filament (ortholog); apical part of cell (ortholog); axon (ortholog) 8 74395096 74537284 + 22301074;30032202 116906551 MODEL JAAIVD010000027;XM_032909265 XP_032765156 unconventional myosin-VI protein-coding 625902772 Fxyd1 FXYD domain containing ion transport regulator 1 ENCODES a protein that exhibits ATPase binding (ortholog); myosin binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN negative regulation of protein glutathionylation (ortholog); positive regulation of inorganic anion transmembrane transport (ortholog); positive regulation of organic acid transport (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Myocardial Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); intercalated disc (ortholog) 2 164975492 164979571 + 22301074;30032202 116892291 MODEL JAAIVD010000001;XM_032893892;XM_032893893;XM_032893895;XM_032893896;XM_032893897;XM_032893898 XP_032749783;XP_032749784;XP_032749786;XP_032749787;XP_032749788;XP_032749789 phospholemman protein-coding 625902798 LOC116885039 small nucleolar RNA SNORA48 15 73029137 73029279 + 116885039 MODEL JAAIVD010000010;XR_004385926 snorna 625902801 LOC116890601 small nucleolar RNA SNORA40 1 46384128 46384255 - 116890601 MODEL JAAIVD010000025;XR_004386752 snorna 625902804 Ca2 carbonic anhydrase 2 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); carbon dioxide transport (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic pancreatitis (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 3 157353310 157375549 - 22301074;30032202 116897077 MODEL JAAIVD010000012;XM_032898702 XP_032754593 protein-coding 625902815 Slc16a5 solute carrier family 16 member 5 9 68618445 68630039 - 22301074;30032202 116909925 MODEL JAAIVD010000002;XM_032913690;XM_032913691;XM_032913692;XM_032913693;XM_032913694 XP_032769581;XP_032769582;XP_032769583;XP_032769584;XP_032769585 monocarboxylate transporter 6 protein-coding 625902838 Fat2 FAT atypical cadherin 2 INVOLVED IN cell-substrate adhesion (ortholog); epithelial cell migration (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); spastic ataxia (ortholog); spinocerebellar ataxia 45 (ortholog); FOUND IN adherens junction (ortholog) 9 37668238 37734001 - 22301074;30032202 116908783 MODEL JAAIVD010000002;XM_032912167 XP_032768058 protocadherin Fat 2 protein-coding 625902867 LOC116894309 solute carrier family 22 member 27-like 2 143522681 143577529 - 22301074;30032202 116894309 MODEL JAAIVD010000001;XM_032896005 XP_032751896 protein-coding 625902879 Camk2d calcium/calmodulin dependent protein kinase II delta ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiomegaly (ortholog); epilepsy (ortholog); FOUND IN axon initial segment (ortholog); calcium- and calmodulin-dependent protein kinase complex (ortholog); cochlear hair cell ribbon synapse (ortholog) 3 32588559 32853343 - 22301074;30032202 116896279 MODEL JAAIVD010000012;XM_032897359;XM_032897360;XM_032897361 XP_032753250;XP_032753251;XP_032753252 calcium/calmodulin-dependent protein kinase type II subunit delta protein-coding 625902909 Atp2b2 ATPase plasma membrane Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 82 (ortholog); FOUND IN apical plasma membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) 6 32479315 32789906 + 22301074;30032202 116903396 MODEL JAAIVD010000024;XM_032905898;XM_032905899;XM_032905900;XM_032905902;XM_032905903;XM_032905904;XM_032905905;XM_032905906;XM_032905907 XP_032761789;XP_032761790;XP_032761791;XP_032761793;XP_032761794;XP_032761795;XP_032761796;XP_032761797;XP_032761798 plasma membrane calcium-transporting ATPase 2 protein-coding 625902959 Sash3 SAM and SH3 domain containing 3 INVOLVED IN B cell homeostasis (ortholog); homeostasis of number of cells within a tissue (ortholog); positive regulation of adaptive immune response (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); immunodeficiency 102 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 110247426 110262166 - 22301074;30032202 116889198 MODEL JAAIVD010000014;XM_032890357 XP_032746248 SAM and SH3 domain-containing protein 3 protein-coding 625902971 Garem2 GRB2 associated regulator of MAPK1 subtype 2 INVOLVED IN cognition (ortholog); neuron projection extension (ortholog); response to stress (ortholog) 7 23920142 23932891 - 116906013 MODEL JAAIVD010000026;XM_032909054 XP_032764945 GRB2-associated and regulator of MAPK protein 2 protein-coding 625902981 Aqp6 aquaporin 6 ENCODES a protein that exhibits ammonium channel activity (ortholog); carbon dioxide transmembrane transporter activity (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN nitrate transmembrane transport (ortholog); odontogenesis (ortholog); renal water transport (ortholog); PARTICIPATES IN water transport pathway; FOUND IN cytoplasmic vesicle membrane (ortholog) 1 272407639 272410534 + 22301074;30032202 116890252 MODEL JAAIVD010000025;XM_032890978 XP_032746869 aquaporin-6 protein-coding 625902989 Cep295 centrosomal protein 295 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of centrosome duplication (ortholog); ASSOCIATED WITH Meckel syndrome (ortholog); Seckel syndrome 11 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 11111310 11146683 - 30032202 116906944 MODEL JAAIVD010000027;XM_032909868 XP_032765759 centrosomal protein of 295 kDa protein-coding 625903021 Stim2 stromal interaction molecule 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); store-operated calcium channel activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); intracellular calcium ion homeostasis (ortholog); positive regulation of calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Weight Gain (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 11 52017754 52153977 - 22301074;30032202 116912912 MODEL JAAIVD010000006;XM_032917169 XP_032773060 protein-coding 625903037 Clk2 CDC like kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of gluconeogenesis (ortholog); protein autophosphorylation (ortholog); protein phosphorylation (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64499608 64511201 - 22301074;30032202 116896664 MODEL JAAIVD010000012;XM_032898011;XM_032898012;XM_032898013;XM_032898014;XM_032898015;XM_032898016;XM_032898017;XM_032898018;XM_032898019;XM_032898021 XP_032753902;XP_032753903;XP_032753904;XP_032753905;XP_032753906;XP_032753907;XP_032753908;XP_032753909;XP_032753910;XP_032753912 dual specificity protein kinase CLK2 protein-coding 625903076 LOC116912005 rabenosyn-5-like 11 55674724 55676917 - 116912005 MODEL JAAIVD010000006 pseudo 625903077 Apof apolipoprotein F INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); triglyceride metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN extracellular space (ortholog) 1 155744805 155746251 + 30032202 116905954 MODEL JAAIVD010000025;XM_032908958 XP_032764849 protein-coding 625903083 Rasa4b RAS p21 protein activator 4B 16 17897173 17924794 - 22301074 116885636 MODEL JAAIVD010000004;XM_032886943 XP_032742834 ras GTPase-activating protein 4B protein-coding 625903108 LOC116904307 elongation factor 1-gamma-like 6 51686339 51691530 - 116904307 MODEL JAAIVD010000024 pseudo 625903109 LOC116899786 U6 spliceosomal RNA 4 93155072 93155179 + 116899786 MODEL JAAIVD010000003;XR_004387794 snrna 625903112 LOC116904350 tubulin alpha-1B chain-like 6 74358324 74369543 - 116904350 MODEL JAAIVD010000024 pseudo 625903113 Polrmt RNA polymerase mitochondrial ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); DNA-directed RNA polymerase activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); combined oxidative phosphorylation deficiency 55 (ortholog); long QT syndrome (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 1 155127089 155137444 + 22301074;30032202 116905693 MODEL JAAIVD010000025;XM_032908675 XP_032764566 DNA-directed RNA polymerase, mitochondrial protein-coding 625903138 Brf1 BRF1 general transcription factor IIIB subunit INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of mRNA stability (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); cerebellofaciodental syndrome (ortholog) 7 130561434 130604937 - 22301074;30032202 116905526 MODEL JAAIVD010000026;XM_032908552 XP_032764443 BRF1 RNA polymerase III transcription initiation factor subunit;transcription factor IIIB 90 kDa subunit protein-coding 625903160 LOC116895377 complex III assembly factor LYRM7-like 3 55026458 55027307 - 116895377 MODEL JAAIVD010000012 pseudo 625903161 LOC116912701 permeability factor 2-like 11 4207565 4208368 + 22301074;30032202 116912701 MODEL JAAIVD010000006;XM_032916830 XP_032772721 protein-coding 625903168 LOC116885084 U6 spliceosomal RNA 15 3531328 3531427 + 116885084 MODEL JAAIVD010000010 pseudo 625903169 LOC116886431 chloride channel protein ClC-Kb 1 16731745 16743082 + 22301074;30032202;8021279 116886431 MODEL D26111;JAAIVD010000025;XM_032887919 BAA05107;XP_032743810 ClC-K2S protein-coding 625903192 LOC116890296 U2 spliceosomal RNA 1 38108089 38108196 - 116890296 MODEL JAAIVD010000025 pseudo 625903193 S1pr1 sphingosine-1-phosphate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); sphingolipid binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN external side of plasma membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 43899228 43903851 - 22301074;30032202 116896340 MODEL JAAIVD010000012;XM_032897443 XP_032753334 sphingosine 1-phosphate receptor 1 protein-coding 625903199 Prpf39 pre-mRNA processing factor 39 7 78740898 78765710 + 22301074;30032202 116905103 MODEL JAAIVD010000026;XM_032907834;XM_032907835;XM_032907836;XM_032907837;XM_032907838 XP_032763725;XP_032763726;XP_032763727;XP_032763728;XP_032763729 pre-mRNA-processing factor 39 protein-coding 625903233 Micos10 mitochondrial contact site and cristae organizing system subunit 10 INVOLVED IN cristae formation (ortholog); PARTICIPATES IN mitochondrial protein import pathway; FOUND IN mitochondrion (ortholog) 1 19071266 19097250 + 22301074;30032202 116893752 MODEL JAAIVD010000025;XM_032895461 XP_032751352 MICOS complex subunit MIC10 protein-coding 625903241 Cenpb centromere protein B ASSOCIATED WITH inner ear disease (ortholog); primary biliary cholangitis (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) 5 110903941 110906739 - 22301074;30032202 116901985 MODEL JAAIVD010000023;XM_032904233 XP_032760124 major centromere autoantigen B protein-coding 625903246 Spmip2 sperm microtubule inner protein 2 3 73937554 74052679 - 116896765 MODEL JAAIVD010000012;XM_032898218;XM_032898219;XM_032898220 XP_032754109;XP_032754110;XP_032754111 C3H4orf45 chromosome 3 C4orf45 homolog;sperm associated microtubule inner protein 2;uncharacterized protein C4orf45 homolog protein-coding 625903264 Zkscan8 zinc finger with KRAB and SCAN domains 8 14 41124419 41149193 - 30032202 116883290 MODEL JAAIVD010000009;XM_032884285;XM_032884286;XM_032884287;XR_004385742;XR_004385743 XP_032740176;XP_032740177;XP_032740178 zinc finger protein with KRAB and SCAN domains 8 protein-coding 625903288 LOC116887621 olfactory receptor 11A1-like 18 10295867 10297364 - 116887621 MODEL JAAIVD010000013 pseudo 625903289 LOC116905917 ras-related protein Rap-2a-like 7 129063360 129065376 - 22301074;30032202 116905917 MODEL JAAIVD010000026;XM_032908904 XP_032764795 protein-coding 625903294 Sun3 Sad1 and UNC84 domain containing 3 FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog) 11 78077766 78110780 - 30032202 116912711 MODEL JAAIVD010000006;XM_032916837;XM_032916838 XP_032772728;XP_032772729 SUN domain-containing protein 3 protein-coding 625903313 Klhl7 kelch like family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH Bohring Syndrome (ortholog); cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 1 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 153314194 153363681 + 22301074 116904198 MODEL JAAIVD010000024;XM_032907110;XM_032907111 XP_032763001;XP_032763002 kelch-like protein 7 protein-coding 625903331 LOC116886962 twinfilin-2-like 18 33778844 33780106 + 30032202 116886962 MODEL JAAIVD010000013;XM_032888457 XP_032744348 protein-coding 625903334 Pgk1 phosphoglycerate kinase 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); phosphoglycerate kinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN gluconeogenesis pathway; glycolysis pathway; hypoxia inducible factor pathway; ASSOCIATED WITH generalized epilepsy (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); membrane raft (ortholog) X 65751204 65767555 + 22301074;30032202 116888744 MODEL JAAIVD010000014;XM_032890039 XP_032745930 protein-coding 625903349 Hoxa2 homeobox A2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain segmentation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH Congenital Microtia (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 88897507 88900036 + 22301074 116903811 MODEL JAAIVD010000024;XM_032906514 XP_032762405 homeobox protein Hox-A2 protein-coding 625903355 LOC116912939 uncharacterized LOC116912939 1 248469143 248472893 + 116912939 MODEL JAAIVD010000025;XR_004389512 ncrna 625903360 Tbc1d1 TBC1 domain family member 1 INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH CAKUT (ortholog); genetic disease (ortholog); obesity (ortholog) 11 21207378 21393503 + 116912865 MODEL JAAIVD010000006;XM_032917081;XM_032917082;XM_032917083 XP_032772972;XP_032772973;XP_032772974 protein-coding 625903389 LOC116908942 olfactory receptor 1468-like 9 92799378 92800313 + 22301074;30032202 116908942 MODEL JAAIVD010000002;XM_032912400 XP_032768291 protein-coding 625903392 Rrp7a ribosomal RNA processing 7 homolog A INVOLVED IN blastocyst formation (ortholog); cilium disassembly (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH primary autosomal recessive microcephaly 28 (ortholog); FOUND IN cell junction (ortholog); centrosome (ortholog); cilium (ortholog) 1 252533855 252541185 - 22301074;30032202 116914375 MODEL JAAIVD010000025;XM_032918582 XP_032774473 ribosomal RNA-processing protein 7 homolog A protein-coding 625903403 LOC116894160 olfactory receptor 2AG2-like 2 104995006 104995956 - 22301074 116894160 MODEL JAAIVD010000001;XM_032895878 XP_032751769 protein-coding 625903406 LOC116888145 40S ribosomal protein S12-like 1 70422783 70423185 + 116888145 MODEL JAAIVD010000025 pseudo 625903407 LOC116902448 uncharacterized LOC116902448 1 116662630 116765420 + 116902448 MODEL JAAIVD010000025;XR_004388076 ncrna 625903411 LOC116889745 uncharacterized LOC116889745 116889745 MODEL JAAIVD010000077 pseudo 625903412 Tut1 terminal uridylyl transferase 1, U6 snRNA-specific ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); histone mRNA catabolic process (ortholog); mRNA 3'-end processing (ortholog); FOUND IN cytosol (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); nuclear speck (ortholog) 2 8979588 8990116 - 22301074;30032202 116890910 MODEL JAAIVD010000001;XM_032891538;XM_032891539 XP_032747429;XP_032747430 speckle targeted PIP5K1A-regulated poly(A) polymerase protein-coding 625903427 LOC116897984 ubiquitin-conjugating enzyme E2 D2-like 4 22875355 22875787 + 116897984 MODEL JAAIVD010000003 pseudo 625903428 Atxn2l ataxin 2 like INVOLVED IN mRNA metabolic process (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); membrane (ortholog) 2 75419185 75430803 + 22301074;30032202 116891523 MODEL JAAIVD010000001;XM_032892663;XM_032892664;XM_032892665;XM_032892666 XP_032748554;XP_032748555;XP_032748556;XP_032748557 ataxin-2-like protein protein-coding 625903466 LOC116897906 28S ribosomal protein S36, mitochondrial-like 4 33871528 33872143 - 30032202 116897906 MODEL JAAIVD010000003;XM_032899309 XP_032755200 protein-coding 625903470 Usp15 ubiquitin specific peptidase 15 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); monoubiquitinated protein deubiquitination (ortholog); negative regulation of antifungal innate immune response (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH chronic myeloid leukemia (ortholog); diabetic neuropathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 201512856 201604859 - 22301074 116909629 MODEL JAAIVD010000025;XM_032913272;XM_032913281;XM_032913287;XM_032913296 XP_032769163;XP_032769172;XP_032769178;XP_032769187 ubiquitin carboxyl-terminal hydrolase 15 protein-coding 625903507 LOC116883934 tubulin alpha-8 chain-like 14 4120623 4121968 + 116883934 MODEL JAAIVD010000009 pseudo 625903508 Homer3 homer scaffold protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of interleukin-2 production (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Keratoconus 5 (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN basal part of cell (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 13 12542705 12553163 + 22301074;30032202 116914545 MODEL JAAIVD010000008;XM_032918877;XM_032918878;XM_032918879;XM_032918880 XP_032774768;XP_032774769;XP_032774770;XP_032774771 homer protein homolog 3 protein-coding 625903530 LOC116904613 histone H2A.V-like 6 28750266 28750779 + 22301074;30032202 116904613 MODEL JAAIVD010000024;XM_032907406 XP_032763297 protein-coding 625903535 LOC116897237 ATP synthase subunit d, mitochondrial-like 1 88671630 88675806 - 116897237 MODEL JAAIVD010000025 pseudo 625903536 Eddm13 epididymal protein 13 2 179855053 179884392 - 116892738 MODEL JAAIVD010000001;XM_032894612 XP_032750503 protein-coding 625903552 LOC116913883 ferritin light chain 1-like 12 17038777 17039169 - 30032202 116913883 MODEL JAAIVD010000007;XM_032918172 XP_032774063 protein-coding 625903555 LOC116911958 activated RNA polymerase II transcriptional coactivator p15-like 11 86251145 86251517 + 116911958 MODEL JAAIVD010000006 pseudo 625903556 LOC116895276 protein transport protein Sec61 subunit gamma-like 3 3767481 3767687 - 22301074;30032202 116895276 MODEL JAAIVD010000012;XM_032896592 XP_032752483 protein-coding 625903559 Dppa4 developmental pluripotency associated 4 INVOLVED IN lung-associated mesenchyme development (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleus (ortholog) 4 32802660 32809692 + 30032202 116898308 MODEL JAAIVD010000003;XM_032899650 XP_032755541 developmental pluripotency-associated protein 4 protein-coding 625903568 Ogfrl1 opioid growth factor receptor like 1 4 100919343 100933022 + 22301074;30032202 116899254 MODEL JAAIVD010000003;XM_032900862;XM_032900863 XP_032756753;XP_032756754 opioid growth factor receptor-like protein 1 protein-coding 625903581 Tceal5 transcription elongation factor A like 5 X 88199670 88202587 - 116889160 MODEL JAAIVD010000014;XM_032890323;XM_032890324;XM_032890325;XM_032890326 XP_032746214;XP_032746215;XP_032746216;XP_032746217 transcription elongation factor A protein-like 5 protein-coding 625903597 LOC116897461 U7 small nuclear RNA 3 85383592 85383653 + 116897461 MODEL JAAIVD010000012;XR_004387491 snrna 625903600 LOC116897166 uncharacterized LOC116897166 1 35295005 35299853 - 116897166 MODEL JAAIVD010000025;XR_004387400 ncrna 625903605 LOC116894426 keratin-associated protein 20-2-like 2 158855454 158855612 + 116894426 MODEL JAAIVD010000001;XM_032896131 XP_032752022 protein-coding 625903608 Wdr45b WD repeat domain 45B ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); TSC1-TSC2 complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Spastic Quadriplegia and Brain Abnormalities with or without Seizures (ortholog); FOUND IN lysosome (ortholog); phagophore assembly site (ortholog) 9 62671272 62702026 + 22301074;30032202 116908770 MODEL JAAIVD010000002;XM_032912134 XP_032768025 WD repeat domain phosphoinositide-interacting protein 3 protein-coding 625903623 LOC116887491 H-2 class I histocompatibility antigen, TLA(B) alpha chain-like 18 9386193 9389264 - 30032202 116887491 MODEL JAAIVD010000013;XM_032889115 XP_032745006 protein-coding 625903631 LOC116893417 vomeronasal type-1 receptor 1-like 2 174591858 174592809 + 116893417 MODEL JAAIVD010000001 pseudo 625903632 Nfkbia NFKB inhibitor alpha ENCODES a protein that exhibits enzyme binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Adenoviridae Infections (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); I-kappaB/NF-kappaB complex (ortholog) 7 68709578 68712822 - 1741294;22301074 116905061 MODEL JAAIVD010000026;X63594;XM_032907754 CAA45138;XP_032763645 RL/IF-1 NF-kappa-B inhibitor alpha protein-coding 625903642 Cdk18 cyclin dependent kinase 18 INVOLVED IN positive regulation of myelination (ortholog); FOUND IN mitochondrion (ortholog) 10 3700974 3733931 + 22301074;30032202;9370357 116911291 MODEL AB005541;JAAIVD010000005;XM_032915198;XM_032915199 BAA21472;XP_032771089;XP_032771090 PCTAIRE3 cyclin-dependent kinase 18 protein-coding 625903664 LOC116889992 apolipoprotein L6-like 1 249389630 249394542 + 22301074;30032202 116889992 MODEL JAAIVD010000025;XM_032890781 XP_032746672 protein-coding 625903669 LOC116902482 U6 spliceosomal RNA 5 110442232 110442334 + 116902482 MODEL JAAIVD010000023;XR_004388098 snrna 625903672 Dlst dihydrolipoamide S-succinyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); dihydrolipoyllysine-residue succinyltransferase activity (ortholog); heat shock protein binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); oxoglutarate dehydrogenase deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 99218979 99243735 + 22301074 116905289 MODEL JAAIVD010000026;XM_032908149;XM_032908150 XP_032764040;XP_032764041 dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial protein-coding 625903696 Usp37 ubiquitin specific peptidase 37 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); protein deubiquitination (ortholog); protein K11-linked deubiquitination (ortholog); FOUND IN nucleus (ortholog) 4 147887886 147949551 - 22301074 116899501 MODEL JAAIVD010000003;XM_032901345 XP_032757236 ubiquitin carboxyl-terminal hydrolase 37 protein-coding 625903726 Rbbp6 RB binding protein 6, ubiquitin ligase ENCODES a protein that exhibits protein kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); embryonic organ development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN centrosome (ortholog); nuclear speck (ortholog); protein-containing complex (ortholog) 2 78860021 78892141 - 22301074;30032202 116891551 MODEL JAAIVD010000001;XM_032892718;XM_032892719;XM_032892720;XM_032892721 XP_032748609;XP_032748610;XP_032748611;XP_032748612 E3 ubiquitin-protein ligase RBBP6 protein-coding 625903754 LOC116883736 testin-2 14 77312586 77325231 + 30032202 116883736 MODEL JAAIVD010000009;XM_032884967 XP_032740858 protein-coding 625903766 LOC116911871 U5 spliceosomal RNA 10 70725394 70725509 + 116911871 MODEL JAAIVD010000005;XR_004389385 snrna 625903769 LOC116913914 leucine-rich repeat and IQ domain-containing protein 1-like 1 181430784 181572257 - 22301074 116913914 MODEL JAAIVD010000025;XM_032918212 XP_032774103 protein-coding 625903784 LOC116895700 gem-associated protein 8-like 3 210245558 210246209 + 116895700 MODEL JAAIVD010000012 pseudo 625903785 St3gal5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5 ENCODES a protein that exhibits lactosylceramide alpha-2,3-sialyltransferase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); salt and pepper syndrome (ortholog) 6 75115843 75167798 + 22301074;30032202 116903694 MODEL JAAIVD010000024;XM_032906367;XM_032906368;XM_032906369;XM_032906370 XP_032762258;XP_032762259;XP_032762260;XP_032762261 lactosylceramide alpha-2,3-sialyltransferase protein-coding 625903808 LOC116895964 N-alpha-acetyltransferase 11-like 3 145340724 145341380 + 116895964 MODEL JAAIVD010000012 pseudo 625903809 Rcl1 RNA terminal phosphate cyclase like 1 INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); psychotic disorder (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 2 29160064 29203851 + 22301074;30032202 116891071 MODEL JAAIVD010000001;XM_032891776 XP_032747667 RNA 3'-terminal phosphate cyclase-like protein protein-coding 625903822 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31424899 31424971 + 116910787 MODEL JAAIVD010000002 trna 625903823 LOC116889026 ubiquitin carboxyl-terminal hydrolase 27-like X 18193214 18194189 + 116889026 MODEL JAAIVD010000014 pseudo 625903824 Mgst1 microsomal glutathione S-transferase 1 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to lipid hydroperoxide (ortholog); glutathione metabolic process (ortholog); glutathione transport (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); neurodegenerative disease (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 11308623 11324047 - 22301074;30032202 116903141 MODEL JAAIVD010000024;XM_032905506 XP_032761397 protein-coding 625903832 LOC116905258 peroxisomal succinyl-coenzyme A thioesterase 7 98123722 98128789 + 22301074;30032202 116905258 MODEL JAAIVD010000026;XM_032908111 XP_032764002 protein-coding 625903839 LOC116911534 coiled-coil domain-containing protein 121-like 10 57106425 57107237 + 116911534 MODEL JAAIVD010000005 pseudo 625903840 Dync1li1 dynein cytoplasmic 1 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); early endosome to recycling endosome transport (ortholog); microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); endocytic vesicle membrane (ortholog) 8 105290393 105325638 + 30032202 116907824 MODEL JAAIVD010000027;XM_032911005 XP_032766896 cytoplasmic dynein 1 light intermediate chain 1 protein-coding 625903857 Ly6e lymphocyte antigen 6 family member E ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); adrenal gland development (ortholog); epinephrine secretion (ortholog); ASSOCIATED WITH Human Influenza (ortholog); pancreatic cancer (ortholog) 1 247707782 247711894 + 30032202 116912576 MODEL JAAIVD010000025;XM_032916695;XM_032916699;XM_032916707 XP_032772586;XP_032772590;XP_032772598 lymphocyte antigen 6E protein-coding 625903870 LOC116892079 2'-deoxynucleoside 5'-phosphate N-hydrolase 1-like 2 151248659 151249229 - 116892079 MODEL JAAIVD010000001 pseudo 625903871 LOC116895591 succinate dehydrogenase assembly factor 4, mitochondrial-like 3 148633419 148633750 - 116895591 MODEL JAAIVD010000012 pseudo 625903872 LOC116885725 vomeronasal type-2 receptor 116-like 16 15726003 15751430 + 22301074;30032202 116885725 MODEL JAAIVD010000004;XM_032887033;XM_032887034;XM_032887035;XM_032887036 XP_032742924;XP_032742925;XP_032742926;XP_032742927 protein-coding 625903888 Glipr2 GLI pathogenesis related 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); positive regulation of epithelial to mesenchymal transition (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH pancreatic ductal adenocarcinoma (ortholog); FOUND IN Golgi membrane (ortholog) 1 2547727 2566800 - 22301074;30032202 116885773 MODEL JAAIVD010000025;XM_032887098 XP_032742989 Golgi-associated plant pathogenesis-related protein 1 protein-coding 625903897 Spaca7 sperm acrosome associated 7 INVOLVED IN negative regulation of cell adhesion (ortholog); single fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog) 13 71097473 71124086 - 22301074 116915118 MODEL JAAIVD010000008;XM_032919563 XP_032775454 sperm acrosome-associated protein 7 protein-coding 625903907 LOC116913235 olfactory receptor 4Q3-like 12 72888296 72898389 + 22301074 116913235 MODEL JAAIVD010000007;XM_032917401 XP_032773292 protein-coding 625903911 LOC116893987 olfactory receptor 52H1-like 2 101469500 101472974 + 22301074 116893987 MODEL JAAIVD010000001;XM_032895701;XM_032895702 XP_032751592;XP_032751593 protein-coding 625903918 Timm8b translocase of inner mitochondrial membrane 8 homolog B PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 8 45076693 45078109 + 116906845 MODEL JAAIVD010000027;XM_032909740 XP_032765631 mitochondrial import inner membrane translocase subunit Tim8 B protein-coding 625903924 Tmem120a transmembrane protein 120A ENCODES a protein that exhibits coenzyme A binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); fat cell differentiation (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear inner membrane (ortholog); plasma membrane (ortholog) 16 18281342 18289829 + 22301074;30032202 116885211 MODEL JAAIVD010000004;XM_032886442 XP_032742333 protein-coding 625903940 Apoc1 apolipoprotein C1 ENCODES a protein that exhibits fatty acid binding (ortholog); lipase inhibitor activity (ortholog); phospholipase inhibitor activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); chylomicron remnant clearance (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); Diabetic Nephropathies (ortholog); FOUND IN endoplasmic reticulum (ortholog); high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) 2 170923673 170927490 + 22301074;30032202 116892524 MODEL JAAIVD010000001;XM_032894280 XP_032750171 apolipoprotein C-I protein-coding 625903949 LOC116887731 small nucleolar RNA SNORA17 18 38585356 38585485 + 116887731 MODEL JAAIVD010000013;XR_004386244 snorna 625903952 Sbf1 SET binding factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatase activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog) 1 258587741 258616104 - 116915032 MODEL JAAIVD010000025;XM_032919441;XM_032919447 XP_032775332;XP_032775338 myotubularin-related protein 5 protein-coding 625903997 LOC116883240 ubiquitin-conjugating enzyme E2 variant 1-like 14 61559011 61559437 + 116883240 MODEL JAAIVD010000009 pseudo 625903998 LOC116905883 60S ribosomal protein L39-like 7 94066132 94066298 + 22301074;30032202 116905883 MODEL JAAIVD010000026;XM_032908873 XP_032764764 protein-coding 625904002 LOC116905424 integral membrane protein DGCR2/IDD-like 7 121428133 121429788 + 22301074;30032202 116905424 MODEL JAAIVD010000026;XM_032908375 XP_032764266 protein-coding 625904005 LOC116889085 serine/arginine-rich splicing factor 10-like X 28146380 28177066 + 116889085 MODEL JAAIVD010000014 pseudo 625904006 Myct1 MYC target 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 2 197230492 197241589 - 30032202 116894640 MODEL JAAIVD010000001;XM_032896353 XP_032752244 myc target protein 1 protein-coding 625904012 Clic5 chloride intracellular channel 5 ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); chloride transport (ortholog); diet induced thermogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 103 (ortholog); Hearing Loss (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) 4 85592234 85687481 - 116899142 MODEL JAAIVD010000003;XM_032900682 XP_032756573 chloride intracellular channel protein 5 protein-coding 625904022 LOC116912903 uncharacterized LOC116912903 11 90826773 91041671 - 116912903 MODEL JAAIVD010000006;XR_004389488;XR_004389489;XR_004389491 ncrna 625904031 Ptgs1 prostaglandin-endoperoxide synthase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); peroxidase activity (ortholog); prostaglandin-endoperoxide synthase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); learning (ortholog); long-chain fatty acid biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Anaphylaxis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); nuclear envelope (ortholog) 5 13224081 13245665 - 22301074;30032202 116901339 MODEL JAAIVD010000023;XM_032903168 XP_032759059 prostaglandin G/H synthase 1 protein-coding 625904046 LOC116898274 olfactory receptor 12-like 4 164526583 164527554 + 22301074;30032202 116898274 MODEL JAAIVD010000003;XM_032899626 XP_032755517 protein-coding 625904049 LOC116903039 vomeronasal type-1 receptor 90-like 6 159408475 159409374 - 22301074;30032202 116903039 MODEL JAAIVD010000024;XM_032905341 XP_032761232 protein-coding 625904052 LOC116887597 RT1 class I histocompatibility antigen, AA alpha chain-like 18 9300566 9304836 - 116887597 MODEL JAAIVD010000013 pseudo 625904053 LOC116897515 small nucleolar RNA SNORA38 3 142976591 142976710 - 116897515 MODEL JAAIVD010000012;XR_004387533 snorna 625904056 Rpl35 ribosomal protein L35 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to UV-B (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 19 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 5 16749651 16752584 - 22301074;30032202 116901371 MODEL JAAIVD010000023;XM_032903236 XP_032759127 60S ribosomal protein L35 protein-coding 625904064 LOC116885432 vomeronasal type-2 receptor 116-like 16 2791581 2903592 + 116885432 MODEL JAAIVD010000004 pseudo 625904065 LOC116887682 jupiter microtubule associated homolog 2-like 18 14950049 14950569 + 116887682 MODEL JAAIVD010000013 pseudo 625904066 Stk31 serine/threonine kinase 31 ENCODES a protein that exhibits protein kinase activity (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog) 6 130992031 131140803 - 22301074 116902970 MODEL JAAIVD010000024;XM_032905289;XM_032905290 XP_032761180;XP_032761181 serine/threonine-protein kinase 31 protein-coding 625904099 LOC116897396 U6 spliceosomal RNA 3 170178381 170178488 - 116897396 MODEL JAAIVD010000012;XR_004387440 snrna 625904102 Cend1 cell cycle exit and neuronal differentiation 1 INVOLVED IN adult walking behavior (ortholog); cerebellar granular layer maturation (ortholog); cerebellar Purkinje cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); vesicle (ortholog) 2 8056436 8059431 + 22301074;30032202 116890871 MODEL JAAIVD010000001;XM_032891452 XP_032747343 cell cycle exit and neuronal differentiation protein 1 protein-coding 625904108 Nupr1 nuclear protein 1, transcriptional regulator ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); male gonad development (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog) 2 75285908 75288086 + 30032202 116891518 MODEL JAAIVD010000001;XM_032892656 XP_032748547 nuclear protein 1 protein-coding 625904115 Pcmt1 protein-L-isoaspartate (D-aspartate) O-methyltransferase ENCODES a protein that exhibits protein-L-isoaspartate (D-aspartate) O-methyltransferase activity (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); protein methylation (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Injuries (ortholog); congestive heart failure (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cytosol (ortholog) 2 229364327 229412691 + 22301074;30032202 116893042 MODEL JAAIVD010000001;XM_032895006;XM_032895007;XM_032895008;XM_032895009;XM_032895010 XP_032750897;XP_032750898;XP_032750899;XP_032750900;XP_032750901 protein-L-isoaspartate(D-aspartate) O-methyltransferase protein-coding 625904143 LOC116904049 protein SDA1 homolog 6 117673628 117676472 - 116904049 MODEL JAAIVD010000024 pseudo 625904144 LOC116894185 olfactory receptor 476 2 105997103 105998035 + 22301074;30032202 116894185 MODEL JAAIVD010000001;XM_032895900 XP_032751791 protein-coding 625904147 LOC116898155 uncharacterized LOC116898155 4 118068441 118080748 + 116898155 MODEL JAAIVD010000003;XR_004387639 ncrna 625904153 LOC116908758 mitochondrial import receptor subunit TOM7 homolog 9 50151301 50151489 - 22301074 116908758 MODEL JAAIVD010000002;XM_032912109 XP_032768000 protein-coding 625904157 LOC116896517 histone H2B type 2-E 3 61062445 61065135 - 22301074;30032202 116896517 MODEL JAAIVD010000012;XM_032897699 XP_032753590 protein-coding 625904162 Thumpd2 THUMP domain 2 tRNA and snRNA guanosine methyltransferase ENCODES a protein that exhibits U6 snRNA (guanine-N(2))-methyltransferase activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleus (ortholog); tRNA methyltransferase complex (ortholog) 7 11984671 12023010 + 30032202 116905835 MODEL JAAIVD010000026;XM_032908809 XP_032764700 THUMP domain containing 2;THUMP domain-containing protein 2 protein-coding 625904176 LOC116887824 high mobility group protein B4-like X 35589298 35589804 + 30032202 116887824 MODEL JAAIVD010000014;XM_032889342 XP_032745233 protein-coding 625904179 LOC116912650 CWF19-like protein 1 11 5215172 5216808 + 116912650 MODEL JAAIVD010000006 pseudo 625904180 LOC116893370 inactive serine/threonine-protein kinase TEX14-like 2 165489037 165490850 - 22301074;30032202 116893370 MODEL JAAIVD010000001;XM_032895170 XP_032751061 protein-coding 625904191 LOC116884364 vegetative cell wall protein gp1-like 15 40525983 40526777 - 116884364 MODEL JAAIVD010000010;XM_032885488 XP_032741379 protein-coding 625904195 LOC116898581 ubiquitin-associated domain-containing protein 1-like 4 165234802 165235877 + 116898581 MODEL JAAIVD010000003 pseudo 625904196 Stambpl1 STAM binding protein like 1 ENCODES a protein that exhibits K63-linked deubiquitinase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); cellular response to leucine starvation (ortholog); cellular response to nutrient levels (ortholog) 2 33816802 33835904 + 22301074;30032202 116891100 MODEL JAAIVD010000001;XM_032891813 XP_032747704 AMSH-like protease protein-coding 625904210 Sod1 superoxide dismutase 1 ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential initiation (ortholog); anterograde axonal transport (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; forkhead class A signaling pathway; hypertension pathway; ASSOCIATED WITH acute kidney failure (ortholog); alcohol use disorder (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 4 54366632 54372166 - 30032202 116899012 MODEL JAAIVD010000003;XM_032900460 XP_032756351 superoxide dismutase [Cu-Zn] protein-coding 625904219 LOC116911863 U2 spliceosomal RNA 10 51464723 51464901 + 116911863 MODEL JAAIVD010000005 pseudo 625904220 LOC116914820 double homeobox protein B-like 13 2115356 2121933 + 22301074 116914820 MODEL JAAIVD010000008;XM_032919277 XP_032775168 protein-coding 625904229 Uba7 ubiquitin like modifier activating enzyme 7 ENCODES a protein that exhibits ISG15 activating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN innate immune response (ortholog); ISG15-protein conjugation (ortholog); modification-dependent protein catabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 8 99307149 99315745 + 30032202 116907701 MODEL JAAIVD010000027;XM_032910824 XP_032766715 ubiquitin-like modifier-activating enzyme 7 protein-coding 625904257 Ccdc159 coiled-coil domain containing 159 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); ASSOCIATED WITH male infertility due to acephalic spermatozoa (ortholog); FOUND IN sperm head-tail coupling apparatus (ortholog) 8 18177990 18186681 + 116906573 MODEL JAAIVD010000027;XM_032909294;XM_032909295;XM_032909296;XM_032909297;XM_032909298;XM_032909299;XM_032909300 XP_032765185;XP_032765186;XP_032765187;XP_032765188;XP_032765189;XP_032765190;XP_032765191 coiled-coil domain-containing protein 159 protein-coding 625904287 Mcm4 minichromosome maintenance complex component 4 ENCODES a protein that exhibits DNA helicase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH immunodeficiency 54 (ortholog); microcephaly (ortholog); FOUND IN CMG complex (ortholog); MCM complex (ortholog); nucleoplasm (ortholog) 4 971842 985937 - 22301074;30032202 116898604 MODEL JAAIVD010000003;XM_032899801 XP_032755692 DNA replication licensing factor MCM4 protein-coding 625904307 LOC116887583 protein kish-A-like 18 6912165 6912886 + 30032202 116887583 MODEL JAAIVD010000013;XM_032889208 XP_032745099 protein-coding 625904311 LOC116904316 protein aurora borealis-like 6 60125291 60177309 - 116904316 MODEL JAAIVD010000024 pseudo 625904312 Ecel1 endothelin converting enzyme like 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); neuropeptide signaling pathway (ortholog); respiratory system process (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 5D (ortholog) 4 159274753 159282127 - 22301074;30032202 116899601 MODEL JAAIVD010000003;XM_032901547 XP_032757438 endothelin-converting enzyme-like 1 protein-coding 625904333 LOC116906059 heterogeneous nuclear ribonucleoprotein A1-like 7 49639904 49640830 + 116906059 MODEL JAAIVD010000026 pseudo 625904334 LOC116904436 60S ribosomal protein L7a-like 6 118622784 118623525 - 116904436 MODEL JAAIVD010000024 pseudo 625904335 C8H15orf61 chromosome 8 C15orf61 homolog FOUND IN mitochondrion (ortholog) 8 57690587 57695224 - 116907349 MODEL JAAIVD010000027;XM_032910281 XP_032766172 uncharacterized protein C15orf61 homolog protein-coding 625904341 LOC116906095 acyl-protein thioesterase 1-like 7 73232264 73236824 - 116906095 MODEL JAAIVD010000026 pseudo 625904342 Rxra retinoid X receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA binding domain binding (ortholog); INVOLVED IN axon regeneration (ortholog); camera-type eye development (ortholog); cardiac muscle cell proliferation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); congenital heart disease (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); nucleus (ortholog) 5 8911230 8937236 - 22301074;30032202 116901236 MODEL JAAIVD010000023;XM_032902981 XP_032758872 retinoic acid receptor RXR-alpha protein-coding 625904355 Sfrp4 secreted frizzled related protein 4 ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); decidualization (ortholog); female pregnancy (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 14 38362223 38455452 + 30032202 116883853 MODEL JAAIVD010000009;XM_032885117;XM_032885119;XM_032885120 XP_032741008;XP_032741010;XP_032741011 secreted frizzled-related protein 4 protein-coding 625904373 LOC116891412 vomeronasal type-1 receptor 2-like 2 70704986 70705941 - 116891412 MODEL JAAIVD010000001 pseudo 625904374 Misp3 MISP family member 3 17 16272782 16274765 + 116886530 MODEL JAAIVD010000011;XM_032888050;XM_032888051 XP_032743941;XP_032743942 uncharacterized protein MISP3 protein-coding 625904386 Ppil4 peptidylprolyl isomerase like 4 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 229214888 229247194 - 22301074;30032202 116893035 MODEL JAAIVD010000001;XM_032894999 XP_032750890 peptidyl-prolyl cis-trans isomerase-like 4 protein-coding 625904403 Gck glucokinase ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); D-glucose binding (ortholog); INVOLVED IN calcium ion import (ortholog); carbohydrate phosphorylation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; forkhead class A signaling pathway; galactokinase deficiency pathway; ASSOCIATED WITH Bone Marrow Failure Syndrome 2 (ortholog); Congenital Hyperinsulinism (ortholog); coronary artery disease (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cell cortex (ortholog) 11 74858481 74899279 - 22301074;30032202 116912319 MODEL JAAIVD010000006;XM_032916344 XP_032772235 hexokinase-4 protein-coding 625904417 Tmem37 transmembrane protein 37 ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog) 10 12638080 12644829 - 22301074;30032202 116911219 MODEL JAAIVD010000005;XM_032915111 XP_032771002 voltage-dependent calcium channel gamma-like subunit protein-coding 625904423 LOC116891294 heterogeneous nuclear ribonucleoprotein A3-like 2 54591644 54592796 - 116891294 MODEL JAAIVD010000001 pseudo 625904424 LOC116907304 small ubiquitin-related modifier 2-like 8 26747878 26748191 - 116907304 MODEL JAAIVD010000027 pseudo 625904425 LOC116895930 60S ribosomal protein L24-like 3 125203348 125205310 + 116895930 MODEL JAAIVD010000012 pseudo 625904426 LOC116897223 replication protein A 14 kDa subunit-like 3 193036589 193036956 + 116897223 MODEL JAAIVD010000012 pseudo 625904427 Clec16a C-type lectin domain containing 16A INVOLVED IN cellular response to starvation (ortholog); mitophagy (ortholog); negative regulation of autophagosome maturation (ortholog); ASSOCIATED WITH Addison's disease (ortholog); immunoglobulin alpha deficiency (ortholog); Meniere's disease (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); Golgi apparatus (ortholog) 9 11614574 11805687 - 30032202 116909976 MODEL JAAIVD010000002;XM_032913755;XM_032913756;XM_032913757 XP_032769646;XP_032769647;XP_032769648 protein CLEC16A protein-coding 625904460 Ndufaf4 NADH:ubiquinone oxidoreductase complex assembly factor 4 INVOLVED IN defense response to virus (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); NADH dehydrogenase complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN cytosol (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 118569849 118574978 - 22301074;30032202 116902726 MODEL JAAIVD010000025;XM_032905080 XP_032760971 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4 protein-coding 625904467 LOC116890479 olfactory receptor 10AD1-like 1 271020118 271022712 - 22301074 116890479 MODEL JAAIVD010000025;XM_032891009 XP_032746900 protein-coding 625904471 Fndc9 fibronectin type III domain containing 9 9 28949568 28954312 + 22301074 116910025 MODEL JAAIVD010000002;XM_032913808 XP_032769699 fibronectin type III domain-containing protein 9 protein-coding 625904477 LOC116883480 40S ribosomal protein S19-like 14 1943272 1943747 + 22301074;30032202 116883480 MODEL JAAIVD010000009;XM_032884635;XM_032884636 XP_032740526;XP_032740527 protein-coding 625904484 LOC116894032 olfactory receptor 51G2-like 2 102093837 102094790 + 22301074 116894032 MODEL JAAIVD010000001;XM_032895750 XP_032751641 protein-coding 625904487 LOC116905297 uncharacterized LOC116905297 7 99534883 99538410 + 116905297 MODEL JAAIVD010000026;XR_004388512 ncrna 625904492 LOC116911286 macrophage migration inhibitory factor-like 10 50692681 50693202 - 30032202 116911286 MODEL JAAIVD010000005;XM_032915193 XP_032771084 protein-coding 625904497 Crb3 crumbs cell polarity complex component 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN positive regulation of cell junction assembly (ortholog); protein localization to plasma membrane (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) 4 88440620 88444128 + 116899211 MODEL JAAIVD010000003;XM_032900803;XM_032900804;XM_032900805 XP_032756694;XP_032756695;XP_032756696 protein crumbs homolog 3 protein-coding 625904512 LOC116895427 uncharacterized LOC116895427 3 65363278 65364517 + 116895427 MODEL JAAIVD010000012;XR_004387275 ncrna 625904516 LOC116903052 acidic proline-rich protein PRP33-like 6 16228716 16230865 + 116903052 MODEL JAAIVD010000024;XM_032905352 XP_032761243 protein-coding 625904523 LOC116885913 elastin-like 16 19334735 19340641 + 30032202 116885913 MODEL JAAIVD010000004;XM_032887228 XP_032743119 protein-coding 625904533 Coq9 coenzyme Q9 ENCODES a protein that exhibits enzyme activator activity (ortholog); isoprenoid binding (ortholog); lipid binding (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); coenzyme Q10 deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); ubiquinone biosynthesis complex (ortholog) 17 1718468 1731647 + 22301074;30032202 116886289 MODEL JAAIVD010000011;XM_032887720;XM_032887721 XP_032743611;XP_032743612 ubiquinone biosynthesis protein COQ9, mitochondrial protein-coding 625904551 LOC116897002 succinyl-CoA:3-ketoacid coenzyme A transferase 2A, mitochondrial-like 1 34939187 34941067 + 22301074;30032202 116897002 MODEL JAAIVD010000025;XM_032898610 XP_032754501 protein-coding 625904556 LOC116902501 U6 spliceosomal RNA 5 56580683 56580784 + 116902501 MODEL JAAIVD010000023;XR_004388114 snrna 625904559 LOC116891016 alpha-enolase-like 2 18660587 18661954 + 116891016 MODEL JAAIVD010000001 pseudo 625904560 Kctd19 potassium channel tetramerization domain containing 19 INVOLVED IN male meiotic nuclear division (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN nucleus (ortholog) 17 25108151 25140142 - 22301074 116886656 MODEL JAAIVD010000011;XM_032888151 XP_032744042 BTB/POZ domain-containing protein KCTD19 protein-coding 625904579 LOC116888543 refilin-B-like X 2617229 2617939 - 116888543 MODEL JAAIVD010000014 pseudo 625904580 Vwa2 von Willebrand factor A domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium-independent cell-matrix adhesion (ortholog); regulation of insulin receptor signaling pathway (ortholog); FOUND IN basement membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 2 59250285 59282456 - 22301074 116893091 MODEL JAAIVD010000001;XM_032895035 XP_032750926 von Willebrand factor A domain-containing protein 2 protein-coding 625904596 LOC116900957 aldo-keto reductase family 1 member B1-like 5 96635104 96636260 - 116900957 MODEL JAAIVD010000023 pseudo 625904597 Zfhx3 zinc finger homeobox 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); negative regulation of myoblast differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); autoimmune hepatitis (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 17 28429783 28671816 + 22301074;30032202 116886158 MODEL JAAIVD010000011;XM_032887527 XP_032743418 zinc finger homeobox protein 3 protein-coding 625904611 Gak cyclin G associated kinase ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin coat disassembly (ortholog); clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); vesicle (ortholog) 11 18350869 18415409 - 22301074;30032202 116912168 MODEL JAAIVD010000006;XM_032916092;XM_032916093;XM_032916094 XP_032771983;XP_032771984;XP_032771985 cyclin-G-associated kinase protein-coding 625904646 LOC116884483 signal recognition particle 19 kDa protein-like 15 10008085 10008956 - 116884483 MODEL JAAIVD010000010 pseudo 625904647 LOC116906450 small nucleolar RNA SNORA17 7 52848149 52848272 + 116906450 MODEL JAAIVD010000026 pseudo 625904648 LOC116893441 ornithine decarboxylase-like 2 176697072 176708519 + 116893441 MODEL JAAIVD010000001 pseudo 625904649 LOC116894378 olfactory receptor 13A1-like 2 156701888 156702835 + 22301074 116894378 MODEL JAAIVD010000001;XM_032896087 XP_032751978 protein-coding 625904652 LOC116899742 U6 spliceosomal RNA 4 70700787 70700893 - 116899742 MODEL JAAIVD010000003;XR_004387758 snrna 625904655 Col1a2 collagen type I alpha 2 chain ENCODES a protein that exhibits identical protein binding (ortholog); platelet-derived growth factor binding (ortholog); protease binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); cellular response to aldehyde (ortholog); PARTICIPATES IN endothelin signaling pathway; interleukin-4 signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); ARTERIAL DISSECTION (ortholog); Bruck Syndrome 1 (ortholog); FOUND IN collagen trimer (ortholog); collagen type I trimer (ortholog); extracellular matrix (ortholog) 6 134076181 134111086 - 22301074 116904104 MODEL JAAIVD010000024;XM_032906976 XP_032762867 collagen alpha-2(I) chain protein-coding 625904711 Pou2af1 POU class 2 homeobox associating factor 1 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); germinal center B cell differentiation (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 8 45646792 45673707 + 22301074;30032202 116907352 MODEL JAAIVD010000027;XM_032910284;XM_032910285 XP_032766175;XP_032766176 POU domain class 2-associating factor 1 protein-coding 625904724 Agbl1 AGBL carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN C-terminal protein deglutamylation (ortholog); protein side chain deglutamylation (ortholog); ASSOCIATED WITH Corneal Dystrophy, Fuchs Endothelial, 8 (ortholog); Fuchs' endothelial dystrophy (ortholog) 2 124023091 124461913 + 22301074;30032202 116893238 MODEL JAAIVD010000001;XM_032895109 XP_032751000 ATP/GTP binding protein like 1;cytosolic carboxypeptidase 4 protein-coding 625904744 Ubl7 ubiquitin like 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); protein K27-linked ubiquitination (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) 8 51782827 51802017 + 30032202 116906849 MODEL JAAIVD010000027;XM_032909743;XM_032909744 XP_032765634;XP_032765635 ubiquitin-like protein 7 protein-coding 625904762 LOC116895640 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like 3 177105986 177106837 + 116895640 MODEL JAAIVD010000012 pseudo 625904763 LOC116897960 phosphoglycerate kinase 1-like 4 45839413 45840621 - 116897960 MODEL JAAIVD010000003 pseudo 625904764 Ppwd1 peptidylprolyl isomerase domain and WD repeat containing 1 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog) 3 193134554 193158867 + 22301074;30032202 116897228 MODEL JAAIVD010000012;XM_032898948;XM_032898949 XP_032754839;XP_032754840 peptidylprolyl isomerase domain and WD repeat-containing protein 1 protein-coding 625904783 Cd63 CD63 molecule ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endosome to melanosome transport (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); diabetic neuropathy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); endosome lumen (ortholog); endosome membrane (ortholog) 1 156386648 156389956 + 22301074;30032202 116906585 MODEL JAAIVD010000025;XM_032909328;XM_032909334;XM_032909342 XP_032765219;XP_032765225;XP_032765233 CD63 antigen protein-coding 625904801 LOC116894175 olfactory receptor 2D3 2 105271735 105272679 + 22301074 116894175 MODEL JAAIVD010000001;XM_032895891 XP_032751782 protein-coding 625904804 Rln3 relaxin 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ASSOCIATED WITH Hyperplasia (ortholog); Myocardial Ischemia (ortholog) 17 16239046 16241510 + 22301074 116886404 MODEL JAAIVD010000011;XM_032887875 XP_032743766 relaxin-3 protein-coding 625904810 LOC116898486 high mobility group protein B1-like 4 120315959 120316439 + 116898486 MODEL JAAIVD010000003;XM_032899732 XP_032755623 protein-coding 625904814 Kif14 kinesin family member 14 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell division (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); Flemming body (ortholog); microtubule (ortholog) 10 16801045 16823367 - 22301074 116911762 MODEL JAAIVD010000005;XM_032915755 XP_032771646 kinesin-like protein KIF14 protein-coding 625904831 Dorip1 dopamine receptor interacting protein 1 INVOLVED IN cAMP-mediated signaling (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); gene expression (ortholog) 7 78621048 78629507 + 116905100 MODEL JAAIVD010000026;XM_032907827;XM_032907828 XP_032763718;XP_032763719 C7H14orf28 chromosome 7 C14orf28 homolog;uncharacterized protein C14orf28 homolog protein-coding 625904844 LOC116914394 NADH-cytochrome b5 reductase 3 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH breast cancer (ortholog); Congenital Methemoglobinemia (ortholog); congenital myopathy 1A (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 252575716 252597835 - 22301074;30032202 116914394 MODEL JAAIVD010000025;XM_032918617;XM_032918626;XM_032918634 XP_032774508;XP_032774517;XP_032774525 protein-coding 625904864 Il17ra interleukin 17 receptor A ENCODES a protein that exhibits interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); defense response to fungus (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); chronic mucocutaneous candidiasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 6 26268742 26290697 - 30032202 116903330 MODEL JAAIVD010000024;XM_032905775;XM_032905776 XP_032761666;XP_032761667 interleukin-17 receptor A protein-coding 625904884 Arpc5l actin related protein 2/3 complex subunit 5 like FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 5 16756184 16763955 + 22301074;30032202 116901372 MODEL JAAIVD010000023;XM_032903237 XP_032759128 actin-related protein 2/3 complex subunit 5-like protein protein-coding 625904892 KEG97_t05 tRNA-Gln MT 3759 3829 - 64988239 trna 625904893 Kdelr1 KDEL endoplasmic reticulum protein retention receptor 1 ENCODES a protein that exhibits KDEL sequence binding (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); T cell apoptotic process (ortholog); T cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog) 2 153634507 153645766 - 22301074;30032202 116892119 MODEL JAAIVD010000001;XM_032893600 XP_032749491 ER lumen protein-retaining receptor 1 protein-coding 625904902 Pxt1 peroxisomal testis enriched protein 1 INVOLVED IN positive regulation of apoptotic process (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog); peroxisome (ortholog) 18 4917894 4924056 + 30032202 116887573 MODEL JAAIVD010000013;XM_032889193 XP_032745084 peroxisomal testis-specific protein 1 protein-coding 625904910 LOC116892106 mas-related G-protein coupled receptor member B4 2 153009951 153011021 - 22301074;30032202 116892106 MODEL JAAIVD010000001;XM_032893583 XP_032749474 protein-coding 625904913 LOC116904781 small nucleolar RNA SNORA76 6 31453656 31453734 + 116904781 MODEL JAAIVD010000024;XR_004388445 snorna 625904916 Slc49a3 solute carrier family 49 member 3 11 18219407 18227029 - 22301074;30032202 116912561 MODEL JAAIVD010000006;XM_032916664 XP_032772555 solute carrier family 49 member A3 protein-coding 625904930 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60876707 60876777 + 116897667 MODEL JAAIVD010000012 trna 625904931 LOC116906522 U6 spliceosomal RNA 7 8465082 8465188 - 116906522 MODEL JAAIVD010000026;XR_004388744 snrna 625904934 LOC116891186 cytochrome P450 2B1-like 2 42733387 42756012 + 22301074;30032202 116891186 MODEL JAAIVD010000001;XM_032892004 XP_032747895 protein-coding 625904947 LOC116910673 Z30 small nucleolar RNA 9 87388906 87389001 - 116910673 MODEL JAAIVD010000002;XR_004389205 snorna 625904950 Lgals8 galectin 8 ENCODES a protein that exhibits carbohydrate binding (ortholog); integrin binding (ortholog); INVOLVED IN cellular response to virus (ortholog); lymphatic endothelial cell migration (ortholog); plasma cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 26185383 26209949 - 22301074 116884050 MODEL JAAIVD010000009;XM_032885296;XM_032885297;XM_032885298 XP_032741187;XP_032741188;XP_032741189 galectin-8 protein-coding 625904972 Ipo11 importin 11 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN ribosomal protein import into nucleus (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 190676930 190844324 + 22301074;30032202 116897216 MODEL JAAIVD010000012;XM_032898933;XM_032898934 XP_032754824;XP_032754825 importin-11 protein-coding 625905008 LOC116883941 small nuclear ribonucleoprotein E-like 14 13699769 13703489 + 22301074;30032202 116883941 MODEL JAAIVD010000009;XM_032885190 XP_032741081 protein-coding 625905013 LOC116905473 uncharacterized LOC116905473 7 128044490 128046189 - 116905473 MODEL JAAIVD010000026;XR_004388543 ncrna 625905017 Rabl6 RAB, member RAS oncogene family like 6 ENCODES a protein that exhibits GTP binding (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Meniere's disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 11570226 11595956 + 30032202 116901287 MODEL JAAIVD010000023;XM_032903076 XP_032758967 rab-like protein 6 protein-coding 625905036 Clec11a C-type lectin domain containing 11A ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH anemia (ortholog); carotid stenosis (ortholog); malignant mesothelioma (ortholog); FOUND IN extracellular region (ortholog) 2 155222074 155226394 + 9705843 116892217 MODEL AB009246;JAAIVD010000001;XM_032893777;XM_032893778 BAA32406;XP_032749668;XP_032749669 SCGF C-type lectin domain family 11 member A;Stem cell growth factor protein-coding 625905046 Wnt7a Wnt family member 7A ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); asymmetric protein localization involved in cell fate determination (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); glutamatergic synapse (ortholog) 6 55530662 55577249 + 22301074;30032202 116903502 MODEL JAAIVD010000024;XM_032906098;XM_032906099 XP_032761989;XP_032761990 protein Wnt-7a protein-coding 625905057 LOC116888124 intraflagellar transport protein 52 homolog X 103531393 103537535 - 116888124 MODEL JAAIVD010000014 pseudo 625905058 LOC116911612 actin-related protein 2/3 complex subunit 1B-like 10 26829122 26830374 - 116911612 MODEL JAAIVD010000005 pseudo 625905059 LOC116912918 prefoldin subunit 4-like 11 72579718 72580125 + 116912918 MODEL JAAIVD010000006 pseudo 625905060 LOC116897040 U1 small nuclear ribonucleoprotein C-like 3 146694837 146695953 - 116897040 MODEL JAAIVD010000012 pseudo 625905061 LOC116895029 small nucleolar RNA SNORA17 2 77743350 77743483 - 116895029 MODEL JAAIVD010000001;XR_004387215 snorna 625905064 LOC116905718 epidermal retinol dehydrogenase 2 7 72690473 72712419 + 30032202 116905718 MODEL JAAIVD010000026;XM_032908688 XP_032764579 protein-coding 625905074 LOC116909803 cytochrome c, somatic-like 9 33658296 33658947 - 22301074;30032202 116909803 MODEL JAAIVD010000002;XM_032913498 XP_032769389 protein-coding 625905078 LOC116912033 coiled-coil domain-containing protein 201-like 11 76092158 76096505 - 116912033 MODEL JAAIVD010000006;XM_032915917 XP_032771808 protein-coding 625905083 LOC116908378 small nucleolar RNA SNORA48 8 28056841 28056978 - 116908378 MODEL JAAIVD010000027;XR_004388925 snorna 625905086 LOC116891807 olfactory receptor 51D1 2 102626306 102646112 + 22301074 116891807 MODEL JAAIVD010000001;XM_032893163 XP_032749054 protein-coding 625905091 LOC116901015 pre-mRNA-splicing factor CWC22 homolog 5 124410757 124411256 + 116901015 MODEL JAAIVD010000023 pseudo 625905092 LOC116898125 uncharacterized LOC116898125 4 107718046 107729481 - 116898125 MODEL JAAIVD010000003;XR_004387636 ncrna 625905096 LOC116884877 protein SET-like 15 9936165 9937151 + 116884877 MODEL JAAIVD010000010 pseudo 625905097 Lrch1 leucine rich repeats and calponin homology domain containing 1 INVOLVED IN cellular response to chemokine (ortholog); negative regulation of GTPase activity (ortholog); negative regulation of T cell migration (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); Stroke (ortholog); FOUND IN cytoplasm (ortholog) 12 49449487 49626524 + 22301074 116914006 MODEL JAAIVD010000007;XM_032918278;XM_032918279 XP_032774169;XP_032774170 leucine-rich repeat and calponin homology domain-containing protein 1 protein-coding 625905124 Znf12 zinc finger protein 12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 9898582 9912562 - 22301074;30032202 116885142 MODEL JAAIVD010000004;XM_032886330;XM_032886331 XP_032742221;XP_032742222 protein-coding 625905134 LOC116894701 cofilin-1-like 2 223553137 223553633 + 116894701 MODEL JAAIVD010000001 pseudo 625905135 Golm1 golgi membrane protein 1 INVOLVED IN nucleus organization (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); hepatitis (ortholog); FOUND IN Golgi apparatus (ortholog) 14 78454978 78494084 + 30032202 116883804 MODEL JAAIVD010000009;XM_032885051 XP_032740942 protein-coding 625905149 LOC116889047 xanthine dehydrogenase/oxidase-like X 21396681 21411920 + 116889047 MODEL JAAIVD010000014 pseudo 625905150 Obsl1 obscurin like cytoskeletal adaptor 1 INVOLVED IN Golgi organization (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH 3-M syndrome (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 148836782 148855051 - 22301074 116899539 MODEL JAAIVD010000003;XM_032901418;XM_032901419;XM_032901420 XP_032757309;XP_032757310;XP_032757311 obscurin-like protein 1 protein-coding 625905178 LOC116907788 uncharacterized LOC116907788 8 30751366 30758464 + 116907788 MODEL JAAIVD010000027;XR_004388845 ncrna 625905183 Prkar1a protein kinase cAMP-dependent type I regulatory subunit alpha ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cardiac muscle cell proliferation (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 1, with or without Hormone Resistance (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) 9 69477329 69496563 - 116909128 MODEL JAAIVD010000002;XM_032912607;XM_032912608 XP_032768498;XP_032768499 cAMP-dependent protein kinase type I-alpha regulatory subunit protein-coding 625905201 LOC116900487 olfactory receptor 4X2-like 5 71695106 71696035 - 22301074 116900487 MODEL JAAIVD010000023;XM_032902222 XP_032758113 protein-coding 625905204 Angptl5 angiopoietin like 5 8 3549957 3566615 - 30032202 116907193 MODEL JAAIVD010000027;XM_032910156 XP_032766047 angiopoietin-related protein 5 protein-coding 625905210 LOC116893471 vomeronasal type-1 receptor 4-like 2 180308064 180310042 - 116893471 MODEL JAAIVD010000001 pseudo 625905211 LOC116898174 CAP-Gly domain-containing linker protein 1-like 4 127399130 127402814 - 116898174 MODEL JAAIVD010000003 pseudo 625905212 Ift22 intraflagellar transport 22 FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle B (ortholog) 16 17092987 17113937 - 30032202 116885486 MODEL JAAIVD010000004;XM_032886776;XM_032886777 XP_032742667;XP_032742668 intraflagellar transport protein 22 homolog protein-coding 625905227 LOC116886968 40S ribosomal protein S8-like 18 36265288 36266771 + 116886968 MODEL JAAIVD010000013 pseudo 625905228 Bid BH3 interacting domain death agonist ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN establishment of protein localization to membrane (ortholog); extrinsic apoptotic signaling pathway (ortholog); glial cell apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); bronchopulmonary dysplasia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 6 25844885 25854347 + 22301074;30032202 116903323 MODEL JAAIVD010000024;XM_032905760 XP_032761651 BH3-interacting domain death agonist protein-coding 625905237 LOC116888924 60S ribosomal protein L26-like X 65658148 65658603 - 116888924 MODEL JAAIVD010000014 pseudo 625905238 Fbxw2 F-box and WD repeat domain containing 2 FOUND IN cytoplasm (ortholog) 5 820459 846341 + 22301074 116901110 MODEL JAAIVD010000023;XM_032902674;XM_032902675;XM_032902676;XM_032902677;XM_032902678 XP_032758565;XP_032758566;XP_032758567;XP_032758568;XP_032758569 F-box/WD repeat-containing protein 2 protein-coding 625905263 Il19 interleukin 19 INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); positive regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH asthma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic kidney disease (ortholog) 10 4871404 4877923 + 116911549 MODEL JAAIVD010000005;XM_032915539 XP_032771430 interleukin-19 protein-coding 625905270 LOC116909094 tether containing UBX domain for GLUT4-like 9 234129 235514 - 116909094 MODEL JAAIVD010000002 pseudo 625905271 LOC116908381 U1 spliceosomal RNA 8 31014504 31014671 + 116908381 MODEL JAAIVD010000027;XR_004388928 snrna 625905274 LOC116895341 40S ribosomal protein S19-like 3 41852096 41852563 + 116895341 MODEL JAAIVD010000012 pseudo 625905275 LOC116884901 40S ribosomal protein S2-like 15 3648558 3649067 + 22301074 116884901 MODEL JAAIVD010000010;XM_032886128 XP_032742019 protein-coding 625905278 LOC116907628 cytochrome b-c1 complex subunit 1, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); response to activity (ortholog); response to alkaloid (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); hypertrophic cardiomyopathy (ortholog); PARKINSONISM WITH POLYNEUROPATHY (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 8 100215623 100226767 + 22301074;30032202 116907628 MODEL JAAIVD010000027;XM_032910688 XP_032766579 protein-coding 625905295 Vil1 villin 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); INVOLVED IN actin filament capping (ortholog); actin filament depolymerization (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin filament bundle (ortholog); brush border (ortholog); filopodium (ortholog) 4 147856303 147884694 + 22301074;30032202 116899500 MODEL JAAIVD010000003;XM_032901344 XP_032757235 villin-1 protein-coding 625905319 Thap11 THAP domain containing 11 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell population proliferation (ortholog); electron transport chain (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH methylmalonic aciduria and homocystinuria type cblC (ortholog); Methylmalonic Aciduria and Homocystinuria, cblL Type (ortholog); Spinocerebellar Ataxia 51 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 25593575 25595465 + 30032202 116886421 MODEL JAAIVD010000011;XM_032887906 XP_032743797 THAP domain-containing protein 11 protein-coding 625905324 LOC116884402 uncharacterized LOC116884402 1 269092128 269124987 - 116884402 MODEL JAAIVD010000025;XM_032885507;XM_032885510 XP_032741398;XP_032741401 uncharacterized protein LOC116884402 protein-coding 625905333 LOC116914878 uncharacterized LOC116914878 13 70465206 70468793 - 116914878 MODEL JAAIVD010000008;XR_004389783 ncrna 625905337 Tdrd9 tudor domain containing 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN fertilization (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH azoospermia (ortholog); COVID-19 (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); piP-body (ortholog) 7 129564529 129675816 + 22301074;30032202 116905505 MODEL JAAIVD010000026;XM_032908529 XP_032764420 ATP-dependent RNA helicase TDRD9 protein-coding 625905376 LOC116900655 glyceraldehyde-3-phosphate dehydrogenase-like 5 119397060 119398060 + 116900655 MODEL JAAIVD010000023 pseudo 625905377 LOC116913018 U1 spliceosomal RNA 11 52464727 52464877 + 116913018 MODEL JAAIVD010000006 pseudo 625905378 Pah phenylalanine hydroxylase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN L-phenylalanine metabolic process (ortholog); protein hydroxylation (ortholog); tyrosine biosynthetic process (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); breast cancer (ortholog) 1 166623420 166678631 + 22301074;30032202 116911692 MODEL JAAIVD010000025;XM_032915689 XP_032771580 phenylalanine-4-hydroxylase protein-coding 625905393 Parp16 poly(ADP-ribose) polymerase family member 16 ENCODES a protein that exhibits kinase binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cytoplasmic translation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); nuclear envelope (ortholog) 8 59517799 59534967 + 22301074;30032202 116908198 MODEL JAAIVD010000027;XM_032911480 XP_032767371 protein mono-ADP-ribosyltransferase PARP16 protein-coding 625905402 E2f8 E2F transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell cycle comprising mitosis without cytokinesis (ortholog); chorionic trophoblast cell differentiation (ortholog); fibroblast proliferation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 150966014 150982473 + 30032202 116892074 MODEL JAAIVD010000001;XM_032893547 XP_032749438 transcription factor E2F8 protein-coding 625905419 Ercc3 ERCC excision repair 3, TFIIH core complex helicase subunit ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA repair (ortholog); DNA topological change (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); asphyxia neonatorum (ortholog); FOUND IN nucleoplasm (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFIIH core complex (ortholog) 15 11958961 11989623 - 22301074;30032202 116884577 MODEL JAAIVD010000010;XM_032885719 XP_032741610 general transcription and DNA repair factor IIH helicase subunit XPB protein-coding 625905438 Gpi glucose-6-phosphate isomerase ENCODES a protein that exhibits glucose-6-phosphate isomerase activity (ortholog); monosaccharide binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); erythrocyte homeostasis (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); FOUND IN ciliary membrane (ortholog); cytosol (ortholog); plasma membrane (ortholog) 2 164454431 164482993 + 22301074;30032202 116892282 MODEL JAAIVD010000001;XM_032893879 XP_032749770 protein-coding 625905460 LOC116912617 synaptonemal complex central element protein 2-like 11 29219787 29221773 + 116912617 MODEL JAAIVD010000006 pseudo 625905461 Nxt2 nuclear transport factor 2 like export factor 2 ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear RNA export factor complex (ortholog) X 94355899 94362103 + 30032202 116889131 MODEL JAAIVD010000014;XM_032890302 XP_032746193 NTF2-related export protein 2 protein-coding 625905469 Pask PAS domain containing serine/threonine kinase ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of glycogen biosynthetic process (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); chromosome 2q37 deletion syndrome (ortholog); chronic kidney disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 4 165237659 165266589 - 22301074;30032202 116899662 MODEL JAAIVD010000003;XM_032901673 XP_032757564 PAS domain-containing serine/threonine-protein kinase protein-coding 625905490 Dcaf17 DDB1 and CUL4 associated factor 17 INVOLVED IN acrosome assembly (ortholog); cell morphogenesis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodegeneration with brain iron accumulation (ortholog); Woodhouse-Sakati syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 48347930 48373700 + 22301074;30032202 116901500 MODEL JAAIVD010000023;XM_032903469;XR_004388002 XP_032759360 DDB1- and CUL4-associated factor 17 protein-coding 625905509 LOC116895161 60 kDa heat shock protein, mitochondrial-like 3 22331603 22412099 - 116895161 MODEL JAAIVD010000012 pseudo 625905510 LOC116900542 olfactory receptor 4K3-like 5 89693218 89694138 + 22301074 116900542 MODEL JAAIVD010000023;XM_032902270 XP_032758161 protein-coding 625905514 Xbp1 X-box binding protein 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); angiogenesis (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; forkhead class A signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); borna disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 11 74465840 74471293 + 30032202 116912109 MODEL JAAIVD010000006;XM_032916010 XP_032771901 X-box-binding protein 1 protein-coding 625905523 LOC116887522 sodium-dependent glucose transporter 1A-like 18 39814396 39824750 - 116887522 MODEL JAAIVD010000013 pseudo 625905524 Dlx1 distal-less homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cerebral cortex GABAergic interneuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 48823507 48827563 + 22301074;30032202 116901508 MODEL JAAIVD010000023;XM_032903478 XP_032759369 homeobox protein DLX-1 protein-coding 625905531 Mttp microsomal triglyceride transfer protein ENCODES a protein that exhibits apolipoprotein binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); abetalipoproteinemia (ortholog); Abetalipoproteinemia Neuropathy (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cytosol (ortholog) 3 21031510 21072723 + 22301074;30032202 116896212 MODEL JAAIVD010000012;XM_032897264 XP_032753155 microsomal triglyceride transfer protein large subunit protein-coding 625905553 Star steroidogenic acute regulatory protein ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cellular response to alkaloid (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congenital adrenal hyperplasia (ortholog); Disorders of Environmental Origin (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) 13 60684853 60693029 - 22301074;30032202 116914289 MODEL JAAIVD010000008;XM_032918521 XP_032774412 steroidogenic acute regulatory protein, mitochondrial protein-coding 625905564 LOC116898551 putative sperm motility kinase W 4 154724008 154725489 - 22301074;30032202 116898551 MODEL JAAIVD010000003;XM_032899763 XP_032755654 protein-coding 625905567 Pigf phosphatidylinositol glycan anchor biosynthesis class F INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH ONYCHODYSTROPHY, OSTEODYSTROPHY, IMPAIRED INTELLECTUAL DEVELOPMENT, AND SEIZURES SYNDROME (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 5961536 5989293 + 22301074 116905756 MODEL JAAIVD010000026;XM_032908724;XM_032908726;XM_032908727 XP_032764615;XP_032764617;XP_032764618 phosphatidylinositol-glycan biosynthesis class F protein protein-coding 625905584 Hdac3 histone deacetylase 3 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cyclin binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Anaphylaxis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 6967522 6986716 + 22301074 116884520 MODEL JAAIVD010000010;XM_032885654 XP_032741545 protein-coding 625905603 Slc19a3 solute carrier family 19 member 3 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine transmembrane transport (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); biotin-responsive basal ganglia disease (ortholog); chronic kidney disease (ortholog); FOUND IN plasma membrane (ortholog) 4 155845306 155857618 - 22301074;30032202 116899569 MODEL JAAIVD010000003;XM_032901481 XP_032757372 thiamine transporter 2 protein-coding 625905611 Catsper1 cation channel sperm associated 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); flagellated sperm motility (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); ASSOCIATED WITH glycogen storage disease V (ortholog); male infertility (ortholog); spermatogenic failure 7 (ortholog); FOUND IN CatSper complex (ortholog); plasma membrane (ortholog); sperm flagellum (ortholog) 2 2329328 2337871 - 22301074;30032202 116890705 MODEL JAAIVD010000001;XM_032891135 XP_032747026 cation channel sperm-associated protein 1 protein-coding 625905625 Phip pleckstrin homology domain interacting protein ENCODES a protein that exhibits histone reader activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); insulin receptor signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog) 8 77037687 77154743 - 22301074;30032202 116906605 MODEL JAAIVD010000027;XM_032909356 XP_032765247 PH-interacting protein protein-coding 625905669 Hmgcs1 3-hydroxy-3-methylglutaryl-CoA synthase 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); isomerase activity (ortholog); organic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog); rigid spine muscular dystrophy 1 (ortholog); FOUND IN cytosol (ortholog) 3 177207664 177225430 - 22301074;30032202 116897167 MODEL JAAIVD010000012;XM_032898843;XM_032898844 XP_032754734;XP_032754735 hydroxymethylglutaryl-CoA synthase, cytoplasmic protein-coding 625905689 Atp6v0d1 ATPase H+ transporting V0 subunit d1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); lipodystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); centrosome (ortholog) 17 25252474 25297073 - 22301074;30032202 116886664 MODEL JAAIVD010000011;XM_032888155 XP_032744046 V-type proton ATPase subunit d 1 protein-coding 625905701 Got2 glutamic-oxaloacetic transaminase 2 ENCODES a protein that exhibits amino acid binding (ortholog); carboxylic acid binding (ortholog); enzyme binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); aspartate biosynthetic process (ortholog); aspartate metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 82 (ortholog); FOUND IN cell surface (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) 17 2676621 2702797 - 22301074;30032202 116886264 MODEL JAAIVD010000011;XM_032887686 XP_032743577 aspartate aminotransferase, mitochondrial protein-coding 625905715 LOC116905155 dehydrogenase/reductase SDR family member 7-like 7 86917719 86932988 - 22301074 116905155 MODEL JAAIVD010000026;XM_032907927 XP_032763818 protein-coding 625905726 Dapk1 death associated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hydroperoxide (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); DAPK1-calmodulin complex (ortholog) 14 77393270 77551116 - 22301074;30032202 116883991 MODEL JAAIVD010000009;XM_032885227;XM_032885228 XP_032741118;XP_032741119 death-associated protein kinase 1 protein-coding 625905761 LOC116883465 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 14 31585046 31585387 + 22301074;30032202 116883465 MODEL JAAIVD010000009;XM_032884617 XP_032740508 protein-coding 625905765 LOC116894167 olfactory receptor 6-like 2 105080521 105081470 - 22301074 116894167 MODEL JAAIVD010000001;XM_032895882 XP_032751773 protein-coding 625905768 Exosc5 exosome component 5 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); mRNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH CEREBELLAR ATAXIA, BRAIN ABNORMALITIES, AND CARDIAC CONDUCTION DEFECTS (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); exosome (RNase complex) (ortholog) 2 169126436 169135573 - 30032202 116892453 MODEL JAAIVD010000001;XM_032894165 XP_032750056 exosome complex component RRP46 protein-coding 625905778 Prdx2 peroxiredoxin 2 ENCODES a protein that exhibits antioxidant activity (ortholog); thioredoxin peroxidase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); defense response to tumor cell (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); asbestosis (ortholog); carcinoma (ortholog) 17 15316343 15321399 - 30032202 116886040 MODEL JAAIVD010000011;XM_032887343;XM_032887344 XP_032743234;XP_032743235 peroxiredoxin-2 protein-coding 625905792 LOC116900344 olfactory receptor 10AG1-like 5 68938409 68939380 + 22301074 116900344 MODEL JAAIVD010000023;XM_032902098 XP_032757989 protein-coding 625905795 Uchl1 ubiquitin C-terminal hydrolase L1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); axon target recognition (ortholog); axonal transport of mitochondrion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Deglutition Disorders (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 23802670 23813185 + 22301074;30032202 116912324 MODEL JAAIVD010000006;XM_032916359 XP_032772250 ubiquitin carboxyl-terminal hydrolase isozyme L1 protein-coding 625905808 Agpat5 1-acylglycerol-3-phosphate O-acyltransferase 5 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Keloid (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) 13 65306549 65350332 - 22301074;30032202 116914283 MODEL JAAIVD010000008;XM_032918506 XP_032774397 1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon protein-coding 625905820 Zfand6 zinc finger AN1-type containing 6 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of apoptotic process (ortholog); protein targeting to peroxisome (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Delayed Emergence from Anesthesia (ortholog); skin disease (ortholog) 2 115699959 115756672 + 22301074;30032202 116891874 MODEL JAAIVD010000001;XM_032893275;XM_032893276;XM_032893277;XM_032893278;XM_032893279 XP_032749166;XP_032749167;XP_032749168;XP_032749169;XP_032749170 AN1-type zinc finger protein 6 protein-coding 625905845 Ibtk inhibitor of Bruton tyrosine kinase ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein phosphorylation (ortholog); release of sequestered calcium ion into cytosol (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 8 79748113 79812882 - 30032202 116906714 MODEL JAAIVD010000027;XM_032909520 XP_032765411 protein-coding 625905878 LOC116911636 glyceraldehyde-3-phosphate dehydrogenase-like 10 34359887 34360886 + 116911636 MODEL JAAIVD010000005 pseudo 625905879 LOC116888297 uncharacterized LOC116888297 X 130277659 130288684 - 116888297 MODEL JAAIVD010000014;XR_004386301 ncrna 625905885 Ces5a carboxylesterase 5A 17 435348 464000 - 116886495 MODEL JAAIVD010000011;XM_032887999 XP_032743890 protein-coding 625905901 LOC116887703 patr class I histocompatibility antigen, A-126 alpha chain-like 18 9974901 9978855 - 30032202 116887703 MODEL JAAIVD010000013;XM_032889301 XP_032745192 protein-coding 625905908 LOC116906068 oligosaccharyltransferase complex subunit OSTC-like 7 56934516 56962110 - 116906068 MODEL JAAIVD010000026 pseudo 625905909 LOC116902661 U6 spliceosomal RNA 5 63908867 63908973 - 116902661 MODEL JAAIVD010000023;XR_004388223 snrna 625905912 LOC116894939 small nucleolar RNA SNORD115 2 140320608 140320684 - 116894939 MODEL JAAIVD010000001;XR_004387137 snorna 625905915 Cldn19 claudin 19 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); apical junction assembly (ortholog); cell junction assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephrocalcinosis (ortholog); renal hypomagnesemia 3 (ortholog); FOUND IN apical junction complex (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 1 37695665 37700178 - 30032202 116897662 MODEL JAAIVD010000025;XM_032899153 XP_032755044 claudin-19 protein-coding 625905924 LOC116887425 class II histocompatibility antigen, M alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); late endosome (ortholog) 18 8180772 8184189 - 22301074;30032202 116887425 MODEL JAAIVD010000013;XM_032889042 XP_032744933 protein-coding 625905933 Gtf2f2 general transcription factor IIF subunit 2 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); RNA polymerase II preinitiation complex assembly (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription initiation pathway; FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 48403561 48525528 + 22301074;30032202 116913301 MODEL JAAIVD010000007;XM_032917430 XP_032773321 protein-coding 625905945 LOC116888455 uncharacterized LOC116888455 X 67517383 67520840 + 116888455 MODEL JAAIVD010000014;XM_032889735 XP_032745626 uncharacterized protein LOC116888455 protein-coding 625905951 LOC116911706 contactin-associated protein like 5-2-like 10 76060584 76067848 - 30032202 116911706 MODEL JAAIVD010000005;XM_032915670 XP_032771561 protein-coding 625905958 Taf1b TATA-box binding protein associated factor, RNA polymerase I subunit B ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN RNA polymerase I preinitiation complex assembly (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog); orofacial cleft 1 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); RNA polymerase I core factor complex (ortholog) 7 38102381 38173129 + 30032202 116904911 MODEL JAAIVD010000026;XM_032907521 XP_032763412 TATA box-binding protein-associated factor RNA polymerase I subunit B protein-coding 625905977 Btn1a1 butyrophilin subfamily 1 member A1 14 42463704 42471548 - 30032202 116883550 MODEL JAAIVD010000009;XM_032884720;XM_032884721 XP_032740611;XP_032740612 protein-coding 625905988 LOC116891852 olfactory receptor 5B2-like 2 13282517 13283461 + 22301074;30032202 116891852 MODEL JAAIVD010000001;XM_032893224 XP_032749115 protein-coding 625905991 Gfus GDP-L-fucose synthase ENCODES a protein that exhibits GDP-L-fucose synthase activity (ortholog); GDP-mannose 3,5-epimerase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); positive regulation of endothelial cell migration (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; FOUND IN cytosol (ortholog) 1 248244171 248248990 - 22301074;30032202 116912784 MODEL JAAIVD010000025;XM_032916949;XM_032916955 XP_032772840;XP_032772846 Tsta3 tissue specific transplantation antigen P35B protein-coding 625906009 LOC116889049 cilia- and flagella-associated protein 47-like X 21579327 21586698 + 22301074 116889049 MODEL JAAIVD010000014;XM_032890239 XP_032746130 protein-coding 625906016 LOC116911121 60S ribosomal protein L15-like 10 31733076 31733770 - 116911121 MODEL JAAIVD010000005 pseudo 625906017 LOC116911248 uncharacterized LOC116911248 10 13684549 13717189 + 116911248 MODEL JAAIVD010000005;XR_004389319 ncrna 625906021 LOC116914130 small nucleolar RNA SNORA17 12 61765606 61765730 + 116914130 MODEL JAAIVD010000007 pseudo 625906022 LOC116906079 D-3-phosphoglycerate dehydrogenase-like 7 64256703 64263729 - 116906079 MODEL JAAIVD010000026 pseudo 625906023 Ifit3 interferon induced protein with tetratricopeptide repeats 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 2 34207198 34212339 + 22301074;30032202 116891109 MODEL JAAIVD010000001;XM_032891822 XP_032747713 interferon-induced protein with tetratricopeptide repeats 3 protein-coding 625906029 LOC116895009 small nucleolar RNA SNORA48 2 57028039 57028181 - 116895009 MODEL JAAIVD010000001;XR_004387197 snorna 625906032 Kri1 KRI1 homolog FOUND IN nucleolus (ortholog) 8 17539187 17553267 - 30032202 116906675 MODEL JAAIVD010000027;XM_032909462 XP_032765353 protein KRI1 homolog protein-coding 625906055 Cpt1a carnitine palmitoyltransferase 1A ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to fatty acid (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); atherosclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 4275893 4335667 - 30032202 116890811 MODEL JAAIVD010000001;XM_032891308 XP_032747199 carnitine O-palmitoyltransferase 1, liver isoform protein-coding 625906079 LOC116886775 U2 spliceosomal RNA 17 3856044 3856222 + 116886775 MODEL JAAIVD010000011 pseudo 625906080 Cachd1 cache domain containing 1 ASSOCIATED WITH genetic disease (ortholog) 1 53529761 53753261 - 30032202 116899760 MODEL JAAIVD010000025;XM_032901775 XP_032757666 VWFA and cache domain-containing protein 1 protein-coding 625906111 Tgfb1i1 transforming growth factor beta 1 induced transcript 1 ENCODES a protein that exhibits I-SMAD binding (ortholog); nuclear androgen receptor binding (ortholog); Roundabout binding (ortholog); INVOLVED IN cell fate commitment (ortholog); epithelial cell differentiation (ortholog); morphogenesis of embryonic epithelium (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) 2 73683375 73690089 - 30032202 116891440 MODEL JAAIVD010000001;XM_032892501;XM_032892503;XM_032892504 XP_032748392;XP_032748394;XP_032748395 transforming growth factor beta-1-induced transcript 1 protein protein-coding 625906132 LOC116914524 60S ribosomal protein L17-like 13 68329375 68329859 - 116914524 MODEL JAAIVD010000008 pseudo 625906133 LOC116894225 alpha-enolase-like 2 107204596 107206032 - 22301074;30032202 116894225 MODEL JAAIVD010000001;XM_032895936 XP_032751827 protein-coding 625906138 LOC116906536 serine protease 46 8 101426423 101438139 + 22301074;30032202 116906536 MODEL JAAIVD010000027;XM_032909231 XP_032765122 protein-coding 625906146 Mical3 microtubule associated monooxygenase, calponin and LIM domain containing 3 ENCODES a protein that exhibits actin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); cytoskeleton organization (ortholog); FOUND IN cytosol (ortholog); Flemming body (ortholog); intercellular bridge (ortholog) 6 25617251 25814824 + 22301074 116903322 MODEL JAAIVD010000024;XM_032905758;XM_032905759 XP_032761649;XP_032761650 F-actin-monooxygenase MICAL3 protein-coding 625906186 Znf512b zinc finger protein 512B ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of miRNA transcription (ortholog); FOUND IN nucleoplasm (ortholog) 5 158672048 158682493 - 22301074 116902447 MODEL JAAIVD010000023;XM_032904999;XM_032905000;XM_032905001;XM_032905002;XM_032905003;XM_032905004 XP_032760890;XP_032760891;XP_032760892;XP_032760893;XP_032760894;XP_032760895 protein-coding 625906221 Snca synuclein alpha ENCODES a protein that exhibits actin binding (ortholog); alpha-tubulin binding (ortholog); arachidonate binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN apoptotic cell death pathway; Parkinson's disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) 6 81929667 82027272 + 22301074;30032202 116903722 MODEL JAAIVD010000024;XM_032906402;XM_032906403 XP_032762293;XP_032762294 alpha-synuclein protein-coding 625906236 Gna11 G protein subunit alpha 11 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); enzyme regulator activity (ortholog); G protein activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to pH (ortholog); cranial skeletal system development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH autosomal dominant hypocalcemia 2 (ortholog); CLOVES syndrome (ortholog); congenital heart disease (ortholog); FOUND IN cytoplasm (ortholog); heterotrimeric G-protein complex (ortholog); plasma membrane (ortholog) 1 153345555 153361830 + 22301074;30032202 116904205 MODEL JAAIVD010000025;XM_032907126 XP_032763017 guanine nucleotide-binding protein subunit alpha-11 protein-coding 625906247 LOC116908674 NHP2-like protein 1 9 22967858 22968241 - 116908674 MODEL JAAIVD010000002 pseudo 625906248 LOC116903888 28S ribosomal protein S36, mitochondrial-like 6 24707015 24707298 - 116903888 MODEL JAAIVD010000024 pseudo 625906249 LOC116911099 uncharacterized LOC116911099 10 67444782 67445824 + 116911099 MODEL JAAIVD010000005;XR_004389311 ncrna 625906253 LOC116886693 RNA-binding protein 8A-like 17 27290338 27290673 + 22301074;30032202 116886693 MODEL JAAIVD010000011;XM_032888190 XP_032744081 protein-coding 625906256 Pggt1b protein geranylgeranyltransferase type I subunit beta ENCODES a protein that exhibits CAAX-protein geranylgeranyltransferase activity (ortholog); heterocyclic compound binding (ortholog); peptide binding (ortholog); INVOLVED IN positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); protein geranylgeranylation (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog) 15 40776288 40819678 + 22301074;30032202 116884261 MODEL JAAIVD010000010;XM_032885346;XM_032885347 XP_032741237;XP_032741238 geranylgeranyl transferase type-1 subunit beta protein-coding 625906273 LOC116897543 small nucleolar RNA SNORA17 3 198257343 198257474 + 116897543 MODEL JAAIVD010000012;XR_004387557 snorna 625906276 Mtr 5-methyltetrahydrofolate-homocysteine methyltransferase ENCODES a protein that exhibits amino acid binding (ortholog); folic acid binding (ortholog); methionine synthase activity (ortholog); INVOLVED IN axon regeneration (ortholog); cellular response to methionine (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; choline metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog) 14 25754399 25823441 + 22301074 116883380 MODEL JAAIVD010000009;XM_032884495 XP_032740386 methionine synthase protein-coding 625906312 LOC116887113 keratin-associated protein 12-1-like 18 1066555 1066884 + 22301074 116887113 MODEL JAAIVD010000013;XM_032888656 XP_032744547 protein-coding 625906315 Dcp1b decapping mRNA 1B INVOLVED IN cellular response to interleukin-17 (ortholog); protein localization to nucleus (ortholog); protein localization to P-body (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); P-body (ortholog) 6 27530940 27569711 - 22301074;30032202 116903346 MODEL JAAIVD010000024;XM_032905807;XM_032905808 XP_032761698;XP_032761699 mRNA-decapping enzyme 1B protein-coding 625906330 LOC116911582 ubiquitin-conjugating enzyme E2 D4-like 10 17590126 17590737 - 116911582 MODEL JAAIVD010000005 pseudo 625906331 LOC116910652 U8 small nucleolar RNA 9 48668271 48668406 + 116910652 MODEL JAAIVD010000002;XR_004389186 snorna 625906334 Dnaaf2 dynein axonemal assembly factor 2 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium-dependent cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytoplasm (ortholog) 7 82851394 82857709 - 22301074;30032202 116905112 MODEL JAAIVD010000026;XM_032907849 XP_032763740 protein kintoun protein-coding 625906341 LOC116897654 small nucleolar RNA U3 3 219437068 219437154 - 116897654 MODEL JAAIVD010000012 pseudo 625906342 LOC116893948 peroxiredoxin-2-like 2 95744149 95744868 + 116893948 MODEL JAAIVD010000001 pseudo 625906343 LOC116911386 glyceraldehyde-3-phosphate dehydrogenase-like 10 63307047 63308066 - 116911386 MODEL JAAIVD010000005 pseudo 625906344 LOC116885296 2'-5'-oligoadenylate synthase 1A 16 32934946 32945689 + 30032202 116885296 MODEL JAAIVD010000004;XM_032886545 XP_032742436 protein-coding 625906355 Atpsckmt ATP synthase c subunit lysine N-methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); peptidyl-lysine trimethylation (ortholog); positive regulation of proton-transporting ATP synthase activity, rotational mechanism (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) 3 149206190 149221631 - 30032202 116897047 MODEL JAAIVD010000012;XM_032898670 XP_032754561 ATP synthase subunit C lysine N-methyltransferase protein-coding 625906364 Tut4 terminal uridylyl transferase 4 ENCODES a protein that exhibits miRNA binding (ortholog); RNA uridylyltransferase activity (ortholog); uridylyltransferase activity (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); interleukin-6-mediated signaling pathway (ortholog); miRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); liver benign neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 1 46298184 46399507 - 22301074;30032202 116899126 MODEL JAAIVD010000025;XM_032900658;XM_032900666;XM_032900675;XM_032900683;XM_032900691;XM_032900701 XP_032756549;XP_032756557;XP_032756566;XP_032756574;XP_032756582;XP_032756592 terminal uridylyltransferase 4 protein-coding 625906412 Chrdl1 chordin like 1 ENCODES a protein that exhibits BMP binding (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); BMP signaling pathway (ortholog); cell fate determination (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH genetic disease (ortholog); megalocornea (ortholog); FOUND IN extracellular region (ortholog) X 95345512 95445866 - 22301074 116889021 MODEL JAAIVD010000014;XM_032890224;XM_032890225 XP_032746115;XP_032746116 chordin-like protein 1 protein-coding 625906430 LOC116908765 uncharacterized LOC116908765 9 59302330 59314287 - 116908765 MODEL JAAIVD010000002;XR_004389023;XR_004389024 ncrna 625906436 Stx16 syntaxin 16 ENCODES a protein that exhibits SNAP receptor activity (ortholog); syntaxin binding (ortholog); INVOLVED IN endocytic recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH pseudohypoaldosteronism (ortholog); pseudohypoparathyroidism type 1B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 143884925 143929914 - 22301074;30032202 116902271 MODEL JAAIVD010000023;XM_032904701;XM_032904702;XM_032904703 XP_032760592;XP_032760593;XP_032760594 syntaxin-16 protein-coding 625906452 LOC116908042 zinc finger protein 431-like 8 115283897 115293657 + 22301074 116908042 MODEL JAAIVD010000027;XM_032911316 XP_032767207 protein-coding 625906460 Celf1 CUGBP Elav-like family member 1 ENCODES a protein that exhibits BRE binding (ortholog); lncRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN cellular response to polyamine macromolecule (ortholog); cerebral cortex development (ortholog); cerebral cortex neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); male germ cell nucleus (ortholog) 5 65116541 65190724 + 30032202 116901607 MODEL JAAIVD010000023;XM_032903634;XM_032903635;XM_032903636;XM_032903637;XM_032903638;XM_032903639;XM_032903640;XM_032903641;XM_032903642;XM_032903644 XP_032759525;XP_032759526;XP_032759527;XP_032759528;XP_032759529;XP_032759530;XP_032759531;XP_032759532;XP_032759533;XP_032759535 protein-coding 625906504 Ric3 RIC3 acetylcholine receptor chaperone ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein localization to cell surface (ortholog); protein-containing complex assembly (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 2 92405230 92450939 + 30032202 116891682 MODEL JAAIVD010000001;XM_032892942;XM_032892943;XM_032892944 XP_032748833;XP_032748834;XP_032748835 protein RIC-3 protein-coding 625906519 Meak7 MTOR associated protein, eak-7 homolog INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); positive regulation of protein localization to lysosome (ortholog); regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 17 39405486 39427647 - 30032202 116886189 MODEL JAAIVD010000011;XM_032887562 XP_032743453 MTOR-associated protein MEAK7 protein-coding 625906531 Slc2a4rg SLC2A4 regulator ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nuclear speck (ortholog) 5 158479410 158482752 + 30032202 116901099 MODEL JAAIVD010000023;XM_032902660 XP_032758551 protein-coding 625906541 Gkn1 gastrokine 1 ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 6 58966261 58971192 + 30032202 116902742 MODEL JAAIVD010000024;XM_032905090 XP_032760981 gastrokine-1 protein-coding 625906551 Heatr1 HEAT repeat containing 1 INVOLVED IN neural precursor cell proliferation (ortholog); positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH glioblastoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 14 26143783 26184468 + 30032202 116884052 MODEL JAAIVD010000009;XM_032885299 XP_032741190 HEAT repeat-containing protein 1 protein-coding 625906598 LOC116889629 55 kDa erythrocyte membrane protein-like Y 1863613 1867615 - 116889629 MODEL JAAIVD010000015 pseudo 625906599 Ly6h lymphocyte antigen 6 family member H ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog) 1 247890763 247893222 - 30032202 116912595 MODEL JAAIVD010000025;XM_032916720;XM_032916728;XM_032916735;XM_032916740 XP_032772611;XP_032772619;XP_032772626;XP_032772631 lymphocyte antigen 6H protein-coding 625906617 Fut7 fucosyltransferase 7 ENCODES a protein that exhibits 4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity (ortholog); alpha-(1->3)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); ceramide metabolic process (ortholog); embryo implantation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network (ortholog) 5 11756731 11768578 - 22301074;30032202 116900026 MODEL JAAIVD010000023;XM_032901823 XP_032757714 alpha-(1,3)-fucosyltransferase 7 protein-coding 625906623 LOC116904658 U7 small nuclear RNA 6 114148711 114148773 + 116904658 MODEL JAAIVD010000024;XR_004388358 snrna 625906626 LOC116894252 vomeronasal type-2 receptor 116-like 2 115052762 115102518 + 22301074;30032202 116894252 MODEL JAAIVD010000001;XM_032895958 XP_032751849 protein-coding 625906634 Tbl1xr1 TBL1X/Y related 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN adipose tissue development (ortholog); blastocyst hatching (ortholog); fat pad development (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 41 (ortholog); diffuse large B-cell lymphoma (ortholog); genetic disease (ortholog); FOUND IN histone deacetylase complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 3 133262113 133401900 + 22301074;30032202 116896998 MODEL JAAIVD010000012;XM_032898602;XM_032898603 XP_032754493;XP_032754494 F-box-like/WD repeat-containing protein TBL1XR1;TBL1X receptor 1 protein-coding 625906657 Reep5 receptor accessory protein 5 INVOLVED IN endoplasmic reticulum membrane organization (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); junctional sarcoplasmic reticulum membrane (ortholog) 15 9985295 10015017 + 116884482 MODEL JAAIVD010000010;XM_032885599 XP_032741490 receptor expression-enhancing protein 5 protein-coding 625906666 Ap2a1 adaptor related protein complex 2 subunit alpha 1 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of hyaluronan biosynthetic process (ortholog); positive regulation of neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; FOUND IN AP-2 adaptor complex (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 154613708 154642809 + 22301074;30032202 116892183 MODEL JAAIVD010000001;XM_032893704;XM_032893705 XP_032749595;XP_032749596 AP-2 complex subunit alpha-1 protein-coding 625906695 Gas2l3 growth arrest specific 2 like 3 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); microtubule cytoskeleton (ortholog) 1 168451685 168472097 - 22301074;30032202 116889978 MODEL JAAIVD010000025;XM_032890772 XP_032746663 GAS2-like protein 3 protein-coding 625906707 LOC116902944 60S ribosomal protein L7-like 6 122358921 122359704 + 116902944 MODEL JAAIVD010000024 pseudo 625906708 LOC116888629 protein NipSnap homolog 3A-like 1 96777936 96788722 + 30032202 116888629 MODEL JAAIVD010000025;XM_032889927;XM_032889932 XP_032745818;XP_032745823 protein NipSnap homolog 3B-like protein-coding 625906721 LOC116902231 mitochondrial pyruvate carrier 1-like 5 137100457 137100845 - 116902231 MODEL JAAIVD010000023 pseudo 625906722 LOC116894068 olfactory receptor 51G2 2 102909860 102910798 - 22301074 116894068 MODEL JAAIVD010000001;XM_032895791 XP_032751682 protein-coding 625906725 Gpr179 G protein-coupled receptor 179 INVOLVED IN protein localization to plasma membrane (ortholog); response to light stimulus (ortholog); visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1E (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) 9 57036867 57052969 + 22301074 116909758 MODEL JAAIVD010000002;XM_032913443 XP_032769334 probable G-protein coupled receptor 179 protein-coding 625906738 LOC116894509 glyceraldehyde-3-phosphate dehydrogenase-like 2 173597347 173598373 + 116894509 MODEL JAAIVD010000001 pseudo 625906739 LOC116892580 hereditary hemochromatosis protein homolog 2 171864814 171892460 - 30032202 116892580 MODEL JAAIVD010000001;XM_032894360 XP_032750251 protein-coding 625906749 LOC116904191 uncharacterized LOC116904191 6 152916974 152917988 - 22301074 116904191 MODEL JAAIVD010000024;XM_032907104 XP_032762995 uncharacterized protein LOC116904191 protein-coding 625906754 LOC116885272 40S ribosomal protein S5-like 16 38326497 38337449 + 116885272 MODEL JAAIVD010000004 pseudo 625906755 LOC116914126 small nucleolar RNA SNORA17 12 68600825 68600953 - 116914126 MODEL JAAIVD010000007;XR_004389689 snorna 625906758 Zfpm2 zinc finger protein, FOG family member 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); embryonic organ development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH 46,XY sex reversal 3 (ortholog); 46,XY sex reversal 9 (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleoplasm (ortholog) 1 214333917 214343557 + 30032202 116910916 MODEL JAAIVD010000025;XM_032914674 XP_032770565 zinc finger protein ZFPM2 protein-coding 625906765 LOC116899753 U6 spliceosomal RNA 4 56726099 56726205 - 116899753 MODEL JAAIVD010000003;XR_004387768 snrna 625906768 Cadm3 cell adhesion molecule 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth Disease Axonal Type 2FF (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cell-cell junction (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 10 52368479 52399213 - 30032202 116910866 MODEL JAAIVD010000005;XM_032914627;XM_032914628 XP_032770518;XP_032770519 protein-coding 625906785 Psmb1 proteasome 20S subunit beta 1 ASSOCIATED WITH Acute Coronary Syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND ABSENT LANGUAGE (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 496850 514118 + 22301074 116883875 MODEL JAAIVD010000009;XM_032885141 XP_032741032 proteasome subunit beta type-1 protein-coding 625906795 Itpripl1 ITPRIP like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN calcium ion import (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 5 105966101 105969052 - 30032202 116901928 MODEL JAAIVD010000023;XM_032904151 XP_032760042 inositol 1,4,5-trisphosphate receptor-interacting protein-like 1 protein-coding 625906801 Rep15 RAB15 effector protein INVOLVED IN receptor recycling (ortholog); transferrin transport (ortholog); FOUND IN endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog); recycling endosome (ortholog) 6 4702563 4703640 + 22301074;30032202 116904509 MODEL JAAIVD010000024;XM_032907299 XP_032763190 protein-coding 625906806 LOC116889609 lysine-specific demethylase 5D-like Y 1726802 1830170 - 22301074;30032202 116889609 MODEL JAAIVD010000015;XM_032890537 XP_032746428 protein-coding 625906837 A1bg alpha-1-B glycoprotein INVOLVED IN growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); schizophrenia (ortholog); FOUND IN extracellular region (ortholog) 1 237610238 237613956 + 30032202 116890116 MODEL JAAIVD010000025;XM_032890857 XP_032746748 alpha-1B-glycoprotein protein-coding 625906849 Chid1 chitinase domain containing 1 ENCODES a protein that exhibits oligosaccharide binding (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN extracellular space (ortholog); late endosome (ortholog); lysosome (ortholog) 2 7954010 7990839 + 22301074;30032202 116890859 MODEL JAAIVD010000001;XM_032891425 XP_032747316 chitinase domain-containing protein 1 protein-coding 625906866 LOC116890623 U1 spliceosomal RNA 1 12328216 12328335 + 116890623 MODEL JAAIVD010000025 pseudo 625906867 LOC116906947 uncharacterized LOC116906947 8 11120529 11123508 + 116906947 MODEL JAAIVD010000027;XR_004388786 ncrna 625906872 Amacr alpha-methylacyl-CoA racemase ENCODES a protein that exhibits alpha-methylacyl-CoA racemase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenoma (ortholog); alpha-methylacyl-CoA racemase deficiency (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 3 169765827 169777832 - 30032202 116897123 MODEL JAAIVD010000012;XM_032898779 XP_032754670 protein-coding 625906881 LOC116901697 olfactory receptor 50-like 5 82019622 82020560 + 22301074;30032202 116901697 MODEL JAAIVD010000023;XM_032903826 XP_032759717 protein-coding 625906884 Avpr1a arginine vasopressin receptor 1A ENCODES a protein that exhibits peptide hormone binding (ortholog); V1A vasopressin receptor binding (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to water deprivation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; ASSOCIATED WITH acute kidney failure (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); plasma membrane (ortholog) 1 200862371 200867184 + 22301074;30032202 116890036 MODEL JAAIVD010000025;XM_032890810 XP_032746701 vasopressin V1a receptor protein-coding 625906890 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 13 43596917 43596988 + 116915201 MODEL JAAIVD010000008 trna 625906891 LOC116888861 uncharacterized LOC116888861 1 107187111 107191353 - 116888861 MODEL JAAIVD010000025;XR_004386350 ncrna 625906896 Liat1 ligand of ATE1 ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); INVOLVED IN membraneless organelle assembly (ortholog); protein arginylation (ortholog); FOUND IN nucleolus (ortholog) 9 94723602 94727498 + 30032202 116909612 MODEL JAAIVD010000002;XM_032913235 XP_032769126 C9H17orf97 chromosome 9 C17orf97 homolog;protein LIAT1 protein-coding 625906902 LOC116891415 deleted in malignant brain tumors 1 protein 2 70963056 71038566 - 22301074;30032202 116891415 MODEL JAAIVD010000001;XM_032892441 XP_032748332 protein-coding 625906944 Rps2 ribosomal protein S2 ENCODES a protein that exhibits enzyme binding (ortholog); fibroblast growth factor binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); formation of translation preinitiation complex (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); Hypoxia (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog) 9 2006441 2008186 + 22301074;30032202 116909691 MODEL JAAIVD010000002;XM_032913353 XP_032769244 40S ribosomal protein S2 protein-coding 625906954 LOC116906367 small nucleolar RNA SNORD113/SNORD114 family 7 127251496 127251570 + 116906367 MODEL JAAIVD010000026;XR_004388636 snorna 625906957 LOC116888901 uncharacterized LOC116888901 X 128033800 128035129 + 116888901 MODEL JAAIVD010000014;XR_004386355 ncrna 625906962 LOC116895281 ankyrin repeat and SOCS box protein 17 3 7792365 7803869 - 22301074 116895281 MODEL JAAIVD010000012;XM_032896596 XP_032752487 protein-coding 625906969 Khdrbs3 KH RNA binding domain containing, signal transduction associated 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); positive regulation of RNA splicing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 242348296 242497980 + 30032202 116912328 MODEL JAAIVD010000025;XM_032916369;XM_032916380;XR_004389447 XP_032772260;XP_032772271 KH domain-containing, RNA-binding, signal transduction-associated protein 3 protein-coding 625906990 Bag4 BAG cochaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) 13 60713289 60733770 + 22301074;30032202 116914277 MODEL JAAIVD010000008;XM_032918500 XP_032774391 BAG family molecular chaperone regulator 4 protein-coding 625906999 Sltm SAFB like transcription modulator ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 8 64889890 64935140 + 22301074;30032202 116908065 MODEL JAAIVD010000027;XM_032911334;XM_032911335;XM_032911336;XM_032911337;XM_032911338 XP_032767225;XP_032767226;XP_032767227;XP_032767228;XP_032767229 SAFB-like transcription modulator protein-coding 625907031 LOC116905540 uncharacterized LOC116905540 7 8036465 8039712 - 116905540 MODEL JAAIVD010000026;XR_004388550 ncrna 625907035 Rbis ribosomal biogenesis factor INVOLVED IN ribosome biogenesis (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 157579468 157585833 + 22301074;30032202 116897084 MODEL JAAIVD010000012;XM_032898709;XM_032898710 XP_032754600;XP_032754601 protein-coding 625907048 LOC116910948 matrin-3-like 10 79980290 80014155 - 116910948 MODEL JAAIVD010000005 pseudo 625907049 Lilra5 leukocyte immunoglobulin like receptor A5 INVOLVED IN negative regulation of interleukin-12 production (ortholog); negative regulation of interleukin-13 production (ortholog); positive regulation of calcium ion transport (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 2 176722113 176726904 + 30032202 116892648 MODEL JAAIVD010000001;XM_032894468 XP_032750359 leukocyte immunoglobulin-like receptor subfamily A member 5 protein-coding 625907059 LOC116906302 60S ribosomal protein L7-like 7 28932428 28933289 - 116906302 MODEL JAAIVD010000026;XR_004388592 pseudo 625907062 Tlcd3b TLC domain containing 3B ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 22 (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 2 75065704 75072629 - 22301074;30032202 116891504 MODEL JAAIVD010000001;XM_032892636 XP_032748527 ceramide synthase protein-coding 625907071 LOC116900931 low-density lipoprotein receptor class A domain-containing protein 3-like 5 79880696 80022222 - 22301074;30032202 116900931 MODEL JAAIVD010000023;XM_032902579 XP_032758470 protein-coding 625907079 Kif26a kinesin family member 26A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); enteric nervous system development (ortholog); microtubule-based movement (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 11 (ortholog) 7 129747185 129782832 + 22301074;30032202 116905511 MODEL JAAIVD010000026;XM_032908532;XM_032908533 XP_032764423;XP_032764424 kinesin-like protein KIF26A protein-coding 625907102 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41403137 41403208 + 116884179 MODEL JAAIVD010000009 trna 625907103 LOC116897391 U1 spliceosomal RNA 3 60833937 60834101 + 116897391 MODEL JAAIVD010000012;XR_004387435 snrna 625907106 Dnase2 deoxyribonuclease 2, lysosomal ENCODES a protein that exhibits deoxyribonuclease II activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); enucleate erythrocyte differentiation (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY-PANCYTOPENIA SYNDROME (ortholog); Experimental Arthritis (ortholog); rheumatoid arthritis (ortholog) 17 15377954 15380810 - 22301074;30032202 116886533 MODEL JAAIVD010000011;XM_032888054 XP_032743945 deoxyribonuclease-2-alpha protein-coding 625907116 LOC116904792 small nucleolar RNA U85 6 22713976 22714303 + 116904792 MODEL JAAIVD010000024;XR_004388454 snorna 625907119 Mrm3 mitochondrial rRNA methyltransferase 3 ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (guanosine-2'-O-)-methyltransferase activity (ortholog); INVOLVED IN rRNA processing (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 94949954 94957975 + 22301074;30032202 116910495 MODEL JAAIVD010000002;XM_032914386;XM_032914387;XM_032914388 XP_032770277;XP_032770278;XP_032770279 rRNA methyltransferase 3, mitochondrial protein-coding 625907134 LOC116884314 serine protease inhibitor Kazal-type 10-like 15 68565221 68576064 + 22301074 116884314 MODEL JAAIVD010000010;XM_032885423 XP_032741314 protein-coding 625907143 Slc22a2 solute carrier family 22 member 2 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); amine transmembrane transporter activity (ortholog); choline transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); amine transport (ortholog); amino acid import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); end stage renal disease (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 191317250 191359015 + 22301074;30032202 116894630 MODEL JAAIVD010000001;XM_032896348 XP_032752239 protein-coding 625907158 Abcb11 ATP binding cassette subfamily B member 11 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); bile acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); canalicular bile acid transport (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); benign recurrent intrahepatic cholestasis 2 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 5 46561712 46657009 - 22301074 116900188 MODEL JAAIVD010000023;XM_032901948;XM_032901949 XP_032757839;XP_032757840 bile salt export pump protein-coding 625907194 LOC116904118 dead end protein homolog 1-like 6 136011329 136013054 - 116904118 MODEL JAAIVD010000024 pseudo 625907195 LOC116891434 60S ribosomal protein L21-like 2 73497312 73497795 - 116891434 MODEL JAAIVD010000001 pseudo 625907196 LOC116914865 uncharacterized LOC116914865 13 61040527 61041466 - 116914865 MODEL JAAIVD010000008;XR_004389780 ncrna 625907200 LOC116906769 EH domain-containing protein 3-like 8 20828125 20830313 + 116906769 MODEL JAAIVD010000027;XR_004388769 pseudo 625907203 Ndufb4 NADH:ubiquinone oxidoreductase subunit B4 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 4 22624523 22631015 - 22301074;30032202 116898834 MODEL JAAIVD010000003;XM_032900187 XP_032756078 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4 protein-coding 625907210 LOC116909098 N-lysine methyltransferase KMT5A-like 9 29349265 29350226 + 22301074 116909098 MODEL JAAIVD010000002;XM_032912570 XP_032768461 protein-coding 625907214 Slc1a2 solute carrier family 1 member 2 ENCODES a protein that exhibits cysteine transmembrane transporter activity (ortholog); glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to cocaine (ortholog); D-aspartate import across plasma membrane (ortholog); PARTICIPATES IN amyotrophic lateral sclerosis pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN astrocyte projection (ortholog); axolemma (ortholog); axon (ortholog) 5 80500333 80619335 + 30032202 116901680 MODEL JAAIVD010000023;XM_032903794;XM_032903795 XP_032759685;XP_032759686 excitatory amino acid transporter 2 protein-coding 625907234 Wdr76 WD repeat domain 76 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 5 99635000 99668414 + 22301074;30032202 116901868 MODEL JAAIVD010000023;XM_032904069;XM_032904070;XM_032904071;XM_032904072;XM_032904073;XM_032904074;XM_032904075 XP_032759960;XP_032759961;XP_032759962;XP_032759963;XP_032759964;XP_032759965;XP_032759966 WD repeat-containing protein 76 protein-coding 625907267 LOC116897070 reticulophagy regulator 1-like 3 154970196 154972015 - 30032202 116897070 MODEL JAAIVD010000012;XM_032898693;XM_032898694;XM_032898695 XP_032754584;XP_032754585;XP_032754586 protein-coding 625907278 Atp6v1c2 ATPase H+ transporting V1 subunit C2 ENCODES a protein that exhibits identical protein binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Distal Renal Tubular Acidosis (ortholog) 7 37082926 37122763 - 22301074;30032202 116904899 MODEL JAAIVD010000026;XM_032907507 XP_032763398 V-type proton ATPase subunit C 2 protein-coding 625907296 Stab1 stabilin 1 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); defense response to bacterium (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH ISOLATED HYPERFERRITINEMIA (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN plasma membrane (ortholog) 13 6836964 6867828 - 22301074 116914756 MODEL JAAIVD010000008;XM_032919206 XP_032775097 stabilin-1 protein-coding 625907369 Arhgef19 Rho guanine nucleotide exchange factor 19 INVOLVED IN regulation of actin cytoskeleton organization (ortholog); wound healing (ortholog) 1 16895006 16913656 - 22301074;30032202 116893382 MODEL JAAIVD010000025;XM_032895181;XM_032895185;XM_032895187 XP_032751072;XP_032751076;XP_032751078 protein-coding 625907396 LOC116898205 histone H2A.Z-like 4 138928488 138929037 - 116898205 MODEL JAAIVD010000003 pseudo 625907397 LOC116906469 small nucleolar RNA SNORA17 7 69606428 69606555 - 116906469 MODEL JAAIVD010000026;XR_004388722 snorna 625907400 LOC116910653 small nucleolar RNA SNORD42 9 92255877 92255945 + 116910653 MODEL JAAIVD010000002;XR_004389187 snorna 625907403 LOC116887230 nucleoside diphosphate kinase B-like 18 793236 793876 + 22301074;30032202 116887230 MODEL JAAIVD010000013;XM_032888792 XP_032744683 protein-coding 625907408 Adgrf5 adhesion G protein-coupled receptor F5 INVOLVED IN energy reserve metabolic process (ortholog); erythrocyte development (ortholog); fat cell differentiation (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 4 86383257 86479562 - 22301074 116899150 MODEL JAAIVD010000003;XM_032900703 XP_032756594 protein-coding 625907433 LOC116907711 putative olfactory receptor 10D4 8 82684376 82685356 + 22301074 116907711 MODEL JAAIVD010000027;XM_032910836 XP_032766727 protein-coding 625907436 LOC116905031 SUMO-conjugating enzyme UBC9-like 7 64818696 64819635 + 116905031 MODEL JAAIVD010000026 pseudo 625907437 Adamtsl2 ADAMTS like 2 ENCODES a protein that exhibits microfibril binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); lobar bronchus epithelium development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH acromicric dysplasia (ortholog); Congenital Hand Deformities (ortholog); Contracture (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 5 9549374 9577327 - 22301074;30032202 116901244 MODEL JAAIVD010000023;XM_032902994 XP_032758885 ADAMTS-like protein 2 protein-coding 625907458 LOC116884358 ral guanine nucleotide dissociation stimulator-like 15 39231341 39233002 + 116884358 MODEL JAAIVD010000010;XM_032885485 XP_032741376 protein-coding 625907463 LOC116900478 olfactory receptor 4C5-like 5 71586225 71587195 + 22301074 116900478 MODEL JAAIVD010000023;XM_032902214 XP_032758105 protein-coding 625907467 Trnal-uaa transfer RNA leucine (anticodon UAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12104775 12104857 - 116895139 MODEL JAAIVD010000001 trna 625907468 Tubgcp6 tubulin gamma complex component 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog) 1 258406354 258426993 - 22301074;30032202 116914948 MODEL JAAIVD010000025;XM_032919370 XP_032775261 gamma-tubulin complex component 6;tubulin gamma complex associated protein 6 protein-coding 625907498 LOC116908631 uncharacterized LOC116908631 9 67690494 67692703 + 116908631 MODEL JAAIVD010000002;XR_004389004 ncrna 625907503 Pid1 phosphotyrosine interaction domain containing 1 INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to fatty acid (ortholog); cellular response to interleukin-6 (ortholog); FOUND IN cytoplasm (ortholog) 4 156765955 156991487 - 30032202 116899571 MODEL JAAIVD010000003;XM_032901486 XP_032757377 PTB-containing, cubilin and LRP1-interacting protein protein-coding 625907510 LOC116899826 small nucleolar RNA SNORA38 4 83459399 83459523 + 116899826 MODEL JAAIVD010000003;XR_004387826 snorna 625907513 Jade1 jade family PHD finger 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K16 acetyltransferase activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 3 112341264 112395211 - 30032202 116896903 MODEL JAAIVD010000012;XM_032898454;XM_032898455;XM_032898456;XM_032898457 XP_032754345;XP_032754346;XP_032754347;XP_032754348 protein Jade-1 protein-coding 625907537 Ren renin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); angiotensin-activated signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN benazepril pharmacodynamics pathway; candesartan pharmacodynamics pathway; captopril pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); anemia (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); extracellular space (ortholog) 10 2484573 2494899 - 22301074;30032202 116911244 MODEL JAAIVD010000005;XM_032915146 XP_032771037 protein-coding 625907550 LOC116914101 small nucleolar RNA U6-53/MBII-28 12 71680157 71680266 + 116914101 MODEL JAAIVD010000007;XR_004389669 snorna 625907553 LOC116893269 vomeronasal type-1 receptor 2-like 2 143720971 143721817 + 116893269 MODEL JAAIVD010000001 pseudo 625907554 Map3k5 mitogen-activated protein kinase kinase kinase 5 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); JUN kinase kinase kinase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to amino acid starvation (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Arterial Injury (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); IRE1-TRAF2-ASK1 complex (ortholog) 2 216449154 216650582 - 22301074;30032202 116892976 MODEL JAAIVD010000001;XM_032894935 XP_032750826 protein-coding 625907588 Rnf123 ring finger protein 123 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); protein maturation (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 8 99380171 99408757 - 22301074;30032202 116907566 MODEL JAAIVD010000027;XM_032910590 XP_032766481 E3 ubiquitin-protein ligase RNF123 protein-coding 625907631 LOC116903563 N-acetyltransferase family 8 member 2-like 6 60420989 60423490 + 116903563 MODEL JAAIVD010000024;XR_004388286 pseudo 625907634 LOC116910092 60S ribosomal protein L7a-like 9 12052563 12053357 - 116910092 MODEL JAAIVD010000002 pseudo 625907635 LOC116892773 aurora kinase B-like 2 183014127 183015051 + 116892773 MODEL JAAIVD010000001 pseudo 625907636 Actl9 actin like 9 INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); spermatogenic failure 53 (ortholog); FOUND IN acrosomal vesicle (ortholog); perinuclear theca (ortholog); sperm head (ortholog) 1 158963288 158964647 - 30032202 116889891 MODEL JAAIVD010000025;XM_032890716 XP_032746607 actin-like protein 9 protein-coding 625907641 LOC116906545 uncharacterized LOC116906545 8 31253340 31254574 + 116906545 MODEL JAAIVD010000027;XM_032909247 XP_032765138 uncharacterized protein LOC116906545 protein-coding 625907646 Lrrc8e leucine rich repeat containing 8 VRAC subunit E ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); cellular response to osmotic stress (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) 16 2358743 2369627 + 22301074 116885747 MODEL JAAIVD010000004;XM_032887055;XM_032887056;XM_032887057 XP_032742946;XP_032742947;XP_032742948 volume-regulated anion channel subunit LRRC8E protein-coding 625907659 LOC116908147 actin-like protein 9 8 34386506 34387837 + 30032202 116908147 MODEL JAAIVD010000027;XM_032911442 XP_032767333 protein-coding 625907664 LOC116895759 ubiquitin-40S ribosomal protein S27a-like 3 43614580 43626936 - 116895759 MODEL JAAIVD010000012 pseudo 625907665 LOC116890239 40S ribosomal protein S10-like 1 271262022 271262513 + 116890239 MODEL JAAIVD010000025 pseudo 625907666 LOC116897404 U6 spliceosomal RNA 3 64945511 64945617 - 116897404 MODEL JAAIVD010000012;XR_004387447 snrna 625907669 Ints5 integrator complex subunit 5 INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) 2 9044693 9049504 - 30032202 116890917 MODEL JAAIVD010000001;XM_032891547 XP_032747438 protein-coding 625907675 LOC116883735 serine/threonine-protein phosphatase 2A catalytic subunit 14 25421156 25422073 - 116883735 MODEL JAAIVD010000009 pseudo 625907676 Il1rapl2 interleukin 1 receptor accessory protein like 2 INVOLVED IN regulation of presynapse assembly (ortholog); FOUND IN glutamatergic synapse (ortholog) X 90669433 90787672 - 22301074 116888081 MODEL JAAIVD010000014;XM_032889454 XP_032745345 X-linked interleukin-1 receptor accessory protein-like 2 protein-coding 625907685 Ddb1 damage specific DNA binding protein 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); damaged DNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN base-excision repair, AP site formation via deaminated base removal (ortholog); biological process involved in interaction with symbiont (ortholog); cellular response to UV (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); communication disorder (ortholog); congenital heart disease (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) 2 10086133 10111836 + 22301074;30032202 116890960 MODEL JAAIVD010000001;XM_032891619 XP_032747510 DNA damage-binding protein 1 protein-coding 625907716 Htatsf1 HIV-1 Tat specific factor 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); poly-ADP-D-ribose modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); mRNA splicing, via spliceosome (ortholog); protein localization to site of double-strand break (ortholog); FOUND IN nucleoplasm (ortholog); site of double-strand break (ortholog); U2-type spliceosomal complex (ortholog) X 117471374 117485357 + 22301074;30032202 116888831 MODEL JAAIVD010000014;XM_032890106 XP_032745997 HIV Tat-specific factor 1 protein-coding 625907730 LOC116892236 sialic acid-binding Ig-like lectin 5 2 156119575 156127538 - 30032202 116892236 MODEL JAAIVD010000001;XM_032893807 XP_032749698 protein-coding 625907743 Tigd2 tigger transposable element derived 2 6 82665294 82668851 - 22301074;30032202 116903724 MODEL JAAIVD010000024;XM_032906405 XP_032762296 tigger transposable element-derived protein 2 protein-coding 625907749 Uap1l1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1 ASSOCIATED WITH COVID-19 (ortholog) 5 11818569 11823801 + 30032202 116901306 MODEL JAAIVD010000023;XM_032903108 XP_032758999 UDP-N-acetylhexosamine pyrophosphorylase-like protein 1 protein-coding 625907762 Exoc6b exocyst complex component 6B ASSOCIATED WITH schizophrenia (ortholog); spondyloepimetaphyseal dysplasia with joint laxity type 3 (ortholog) 6 61180641 61626649 + 22301074;30032202 116903585 MODEL JAAIVD010000024;XM_032906207;XM_032906208;XM_032906209 XP_032762098;XP_032762099;XP_032762100 protein-coding 625907794 Micu1 mitochondrial calcium uptake 1 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion import (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); mitochondrial crista junction (ortholog); mitochondrial inner membrane (ortholog) 18 25550106 25701046 + 22301074;30032202 116887548 MODEL JAAIVD010000013;XM_032889179;XM_032889180;XM_032889181 XP_032745070;XP_032745071;XP_032745072 calcium uptake protein 1, mitochondrial protein-coding 625907816 Kptn kaptin, actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 41 (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN filamentous actin (ortholog); KICSTOR complex (ortholog); lamellipodium (ortholog) 2 172950842 172958781 - 30032202 116892608 MODEL JAAIVD010000001;XM_032894410 XP_032750301 KICSTOR complex protein kaptin protein-coding 625907832 St7l suppression of tumorigenicity 7 like INVOLVED IN negative regulation of cell growth (ortholog) 3 53187605 53245723 - 22301074 116896423 MODEL JAAIVD010000012;XM_032897569;XM_032897570 XP_032753460;XP_032753461 suppressor of tumorigenicity 7 protein-like protein-coding 625907853 Cdh24 cadherin 24 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); FOUND IN cell-cell junction (ortholog) 12 70361003 70369166 + 22301074;30032202 116913698 MODEL JAAIVD010000007;XM_032917994 XP_032773885 cadherin-24 protein-coding 625907869 LOC116889570 U6 spliceosomal RNA X 89001552 89001658 - 116889570 MODEL JAAIVD010000014;XR_004386487 snrna 625907872 LOC116909900 olfactory receptor 2AK2-like 9 39229252 39230172 + 22301074 116909900 MODEL JAAIVD010000002;XM_032913652 XP_032769543 protein-coding 625907875 Lzts2 leucine zipper tumor suppressor 2 INVOLVED IN kidney development (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH urinary system disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 44521649 44533259 + 30032202 116891218 MODEL JAAIVD010000001;XM_032892055 XP_032747946 leucine zipper putative tumor suppressor 2 protein-coding 625907884 Sox8 SRY-box transcription factor 8 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); astrocyte fate commitment (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); peripheral nervous system disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 9 2831427 2836438 - 30032202 116909929 MODEL JAAIVD010000002;XM_032913698 XP_032769589 transcription factor SOX-8 protein-coding 625907891 Fam91a1 family with sequence similarity 91 member A1 INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); trans-Golgi network (ortholog) 1 232962945 233002000 + 30032202 116911774 MODEL JAAIVD010000025;XM_032915769;XM_032915777 XP_032771660;XP_032771668 protein FAM91A1 protein-coding 625907922 Efna2 ephrin A2 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); bone remodeling (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; FOUND IN neuromuscular junction (ortholog); perikaryon (ortholog) 1 154686763 154696948 - 22301074;30032202 116905277 MODEL JAAIVD010000025;XM_032908141 XP_032764032 ephrin-A2 protein-coding 625907930 LOC116889288 60S ribosomal protein L29-like 1 129584993 129585462 + 116889288 MODEL JAAIVD010000025 pseudo 625907931 LOC116911973 protein crumbs homolog 1-like 11 35985600 36101419 + 116911973 MODEL JAAIVD010000006 pseudo 625907932 Cdcp1 CUB domain containing protein 1 ASSOCIATED WITH myoepithelioma (ortholog); substance-related disorder (ortholog) 8 114305416 114342511 - 116908021 MODEL JAAIVD010000027;XM_032911282;XM_032911283 XP_032767173;XP_032767174 CUB domain-containing protein 1 protein-coding 625907949 LOC116895704 uncharacterized LOC116895704 3 212307442 212329661 + 116895704 MODEL JAAIVD010000012;XR_004387305 ncrna 625907953 LOC116903993 uncharacterized LOC116903993 6 108203242 108235795 + 116903993 MODEL JAAIVD010000024;XR_004388322 ncrna 625907958 LOC116894864 U6 spliceosomal RNA 2 160140145 160140251 + 116894864 MODEL JAAIVD010000001;XR_004387077 snrna 625907961 A1cf APOBEC1 complementation factor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); embryo implantation (ortholog); low-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH gout (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 2 31927645 32003384 + 30032202 116891086 MODEL JAAIVD010000001;XM_032891800;XM_032891801 XP_032747691;XP_032747692 protein-coding 625907979 LOC116890309 U4 spliceosomal RNA 1 218072841 218072976 + 116890309 MODEL JAAIVD010000025;XR_004386538 snrna 625907982 Adhfe1 alcohol dehydrogenase iron containing 1 ENCODES a protein that exhibits hydroxyacid-oxoacid transhydrogenase activity (ortholog); INVOLVED IN L-glutamate catabolic process via 2-hydroxyglutarate (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 1 144293382 144319687 + 22301074;30032202 116903818 MODEL JAAIVD010000025;XM_032906528 XP_032762419 hydroxyacid-oxoacid transhydrogenase, mitochondrial protein-coding 625908000 Chmp6 charged multivesicular body protein 6 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); late endosome to lysosome transport (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) 9 64098428 64104141 - 30032202 116909946 MODEL JAAIVD010000002;XM_032913721 XP_032769612 protein-coding 625908012 LOC116895189 activated RNA polymerase II transcriptional coactivator p15-like 3 185347949 185348624 - 116895189 MODEL JAAIVD010000012 pseudo 625908013 Mmp23b matrix metallopeptidase 23B ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 1 5043224 5046012 + 22301074;30032202 116886008 MODEL JAAIVD010000025;XM_032887316;XM_032887317;XM_032887322 XP_032743207;XP_032743208;XP_032743213 matrix metalloproteinase-23 protein-coding 625908032 LOC116890223 60S ribosomal protein L23-like 1 262253609 262254032 - 116890223 MODEL JAAIVD010000025 pseudo 625908033 LOC116897265 uncharacterized LOC116897265 3 199098258 199104620 - 116897265 MODEL JAAIVD010000012;XR_004387409 ncrna 625908039 LOC116910943 zinc finger protein 2 homolog 10 75882009 75900530 + 30032202 116910943 MODEL JAAIVD010000005;XM_032914682 XP_032770573 protein-coding 625908045 Ccm2 CCM2 scaffold protein INVOLVED IN blood vessel development (ortholog); blood vessel endothelial cell differentiation (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH cavernous hemangioma (ortholog); Central Nervous System Vascular Malformations (ortholog); cerebral cavernous malformation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 11 75478250 75527783 + 30032202 116912124 MODEL JAAIVD010000006;XM_032916033 XP_032771924 cerebral cavernous malformations 2 protein protein-coding 625908059 Prex2 phosphatidylinositol-3,4,5-trisphosphate dependent Rac exchange factor 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); dendrite morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cholangiocarcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 1 145671779 145881074 + 22301074 116904948 MODEL JAAIVD010000025;XM_032907637 XP_032763528 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein protein-coding 625908096 Tnpo1 transportin 1 INVOLVED IN protein import into nucleus (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 3 197670145 197756728 + 22301074;30032202 116897252 MODEL JAAIVD010000012;XM_032898983;XM_032898984;XM_032898985;XR_004387406 XP_032754874;XP_032754875;XP_032754876 transportin-1 protein-coding 625908132 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 271604613 271604685 + 116890639 MODEL JAAIVD010000025 trna 625908133 LOC116893376 uncharacterized LOC116893376 2 166426211 166512802 + 116893376 MODEL JAAIVD010000001;XM_032895176 XP_032751067 uncharacterized protein LOC116893376 protein-coding 625908139 LOC116911041 zinc finger protein 431-like 1 215711991 215766557 + 30032202 116911041 MODEL JAAIVD010000025;XM_032914791;XM_032914799;XM_032914807 XP_032770682;XP_032770690;XP_032770698 protein-coding 625908152 LOC116887109 keratin-associated protein 10-8-like 18 1082059 1082700 - 22301074;30032202 116887109 MODEL JAAIVD010000013;XM_032888646 XP_032744537 protein-coding 625908155 Fech ferrochelatase ENCODES a protein that exhibits ferrochelatase activity (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cholesterol metabolic process (ortholog); detection of UV (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH bile duct disease (ortholog); colon adenocarcinoma (ortholog); cutaneous porphyria (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 15 66782506 66815168 + 22301074;30032202 116884532 MODEL JAAIVD010000010;XM_032885667 XP_032741558 ferrochelatase, mitochondrial protein-coding 625908170 Tgfb1 transforming growth factor beta 1 ENCODES a protein that exhibits cytokine activity (ortholog); deubiquitinase activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains (ortholog); animal organ regeneration (ortholog); aortic valve morphogenesis (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH acromicric dysplasia (ortholog); actinic keratosis (ortholog); acute kidney failure (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 169090515 169108146 - 22301074;30032202 116892450 MODEL JAAIVD010000001;XM_032894155 XP_032750046 transforming growth factor beta-1 proprotein protein-coding 625908181 Liph lipase H ENCODES a protein that exhibits heparin binding (ortholog); phospholipase activity (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH familial woolly hair syndrome (ortholog); genetic disease (ortholog); hypotrichosis (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 4 6628368 6676762 - 22301074;30032202 116898714 MODEL JAAIVD010000003;XM_032900004 XP_032755895 lipase member H protein-coding 625908195 Hs1bp3 HCLS1 binding protein 3 INVOLVED IN regulation of apoptotic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 7 28652983 28683854 + 22301074 116906297 MODEL JAAIVD010000026;XM_032909191 XP_032765082 HCLS1-binding protein 3 protein-coding 625908206 LOC116904947 palmitoyl-protein thioesterase 1-like 1 35518881 35540967 + 116904947 MODEL JAAIVD010000025;XM_032907984 XP_032763875 protein-coding 625908216 Kcnk5 potassium two pore domain channel subfamily K member 5 ENCODES a protein that exhibits outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN potassium ion export across plasma membrane (ortholog); potassium ion import across plasma membrane (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH status epilepticus (ortholog) 12 89947272 89989288 - 22301074;30032202 116913649 MODEL JAAIVD010000007;XM_032917918 XP_032773809 potassium channel subfamily K member 5 protein-coding 625908225 Srek1 splicing regulatory glutamic acid and lysine rich protein 1 FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 3 193581483 193616921 + 22301074;30032202 116897236 MODEL JAAIVD010000012;XM_032898961;XM_032898962;XM_032898963;XM_032898964 XP_032754852;XP_032754853;XP_032754854;XP_032754855 splicing regulatory glutamine/lysine-rich protein 1 protein-coding 625908252 Sptan1 spectrin alpha, non-erythrocytic 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); spectrin binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant distal hereditary motor neuronopathy 11 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN cortical cytoskeleton (ortholog); cuticular plate (ortholog); fascia adherens (ortholog) 5 6701511 6766710 - 22301074;30032202 116901203 MODEL JAAIVD010000023;XM_032902912 XP_032758803 spectrin alpha chain, non-erythrocytic 1 protein-coding 625908314 LOC116886781 U4 spliceosomal RNA 17 41212810 41212951 - 116886781 MODEL JAAIVD010000011;XR_004386175 snrna 625908317 Numb NUMB endocytic adaptor protein ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); cadherin binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN altered Notch signaling pathway; altered Notch signaling pathway involving the macromolecules modifying the main players; Notch signaling pathway; FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); clathrin-coated pit (ortholog) 7 97886171 98009299 - 30032202 116905253 MODEL JAAIVD010000026;XM_032908100;XM_032908101;XM_032908102;XM_032908103;XM_032908104;XM_032908105 XP_032763991;XP_032763992;XP_032763993;XP_032763994;XP_032763995;XP_032763996 protein numb homolog protein-coding 625908345 LOC116909479 olfactory receptor 10-like 9 32057735 32058670 + 22301074 116909479 MODEL JAAIVD010000002;XM_032913072 XP_032768963 protein-coding 625908348 Vdac3 voltage dependent anion channel 3 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity (ortholog); INVOLVED IN behavioral fear response (ortholog); chemical synaptic transmission (ortholog); learning (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); synaptic vesicle (ortholog) 13 63834651 63851037 + 22301074;30032202 116914393 MODEL JAAIVD010000008;XM_032918610;XM_032918611 XP_032774501;XP_032774502 voltage-dependent anion-selective channel protein 3 protein-coding 625908365 Gspt1 G1 to S phase transition 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation release factor activity (ortholog); INVOLVED IN protein methylation (ortholog); regulation of translational termination (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytosolic ribosome (ortholog); translation release factor complex (ortholog) 9 11033071 11067153 - 22301074;30032202 116908551 MODEL JAAIVD010000002;XM_032911754;XM_032911755 XP_032767645;XP_032767646 eukaryotic peptide chain release factor GTP-binding subunit ERF3A protein-coding 625908389 LOC116906009 60S ribosomal protein L36-like 7 23750899 23751339 + 116906009 MODEL JAAIVD010000026 pseudo 625908390 LOC116892405 IgGFc-binding protein-like 2 167818421 167856625 - 22301074 116892405 MODEL JAAIVD010000001;XM_032894083 XP_032749974 protein-coding 625908413 Bmpr2 bone morphogenetic protein receptor type 2 ENCODES a protein that exhibits activin receptor activity, type II (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); Breast Neoplasms (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); axon (ortholog) 5 6478453 6586665 - 22301074;30032202 116901200 MODEL JAAIVD010000023;XM_032902905 XP_032758796 bone morphogenetic protein receptor type-2 protein-coding 625908430 Pcsk4 proprotein convertase subtilisin/kexin type 4 INVOLVED IN acrosome reaction (ortholog); binding of sperm to zona pellucida (ortholog); fertilization (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 1 154552363 154560389 + 22301074;30032202 116905172 MODEL JAAIVD010000025;XM_032907950 XP_032763841 protein-coding 625908448 LOC116884899 transketolase-like 15 3025898 3027765 + 116884899 MODEL JAAIVD010000010 pseudo 625908449 Evi2a ecotropic viral integration site 2A FOUND IN cilium (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 90909040 90913041 + 22301074;30032202 116908511 MODEL JAAIVD010000002;XM_032911685 XP_032767576 protein EVI2A protein-coding 625908455 LOC116893431 vomeronasal type-2 receptor 116-like 2 175582991 175583896 + 116893431 MODEL JAAIVD010000001 pseudo 625908456 Tmeff2 transmembrane protein with EGF like and two follistatin like domains 2 INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of integrin biosynthetic process (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); polycystic ovary syndrome (ortholog); prostate cancer (ortholog) 4 124258384 124526223 - 22301074;30032202 116899380 MODEL JAAIVD010000003;XM_032901096;XM_032901097 XP_032756987;XP_032756988 tomoregulin-2 protein-coding 625908472 LOC116884868 protocadherin beta-16-like 15 1104649 1119488 + 22301074 116884868 MODEL JAAIVD010000010;XM_032886107;XM_032886108;XM_032886109 XP_032741998;XP_032741999;XP_032742000 protocadherin beta-13-like protein-coding 625908486 Rab4a RAB4A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); GDP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); neurotransmitter receptor transport postsynaptic membrane to endosome (ortholog); protein transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; FOUND IN cytoplasm (ortholog); endosome (ortholog); extracellular exosome (ortholog) 17 43352208 43380803 + 22301074;30032202 116886315 MODEL JAAIVD010000011;XM_032887757;XM_032887758 XP_032743648;XP_032743649 ras-related protein Rab-4A protein-coding 625908502 LOC116884123 U6 spliceosomal RNA 14 51785260 51785370 + 116884123 MODEL JAAIVD010000009;XR_004385853 snrna 625908505 Arfgap3 ARF GTPase activating protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN presynaptic endocytosis (ortholog); protein secretion (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); photoreceptor ribbon synapse (ortholog) 1 252705643 252755452 - 22301074;30032202 116914410 MODEL JAAIVD010000025;XM_032918671;XM_032918681;XM_032918690;XM_032918699 XP_032774562;XP_032774572;XP_032774581;XP_032774590 ADP ribosylation factor GTPase activating protein 3;ADP-ribosylation factor GTPase-activating protein 3 protein-coding 625908530 LOC116912761 importin subunit alpha-4-like 11 19252590 19254145 - 116912761 MODEL JAAIVD010000006 pseudo 625908531 Ociad2 OCIA domain containing 2 INVOLVED IN cell migration (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); response to bacterium (ortholog); FOUND IN endosome (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 30124459 30139821 - 30032202 116912459 MODEL JAAIVD010000006;XM_032916525 XP_032772416 OCIA domain-containing protein 2 protein-coding 625908542 Ptgis prostaglandin I2 synthase ENCODES a protein that exhibits heme binding (ortholog); prostaglandin-I synthase activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 5 150726140 150777483 + 22301074;30032202 116902314 MODEL JAAIVD010000023;XM_032904760;XM_032904761 XP_032760651;XP_032760652 prostacyclin synthase protein-coding 625908559 LOC116913095 cytochrome c1, heme protein, mitochondrial INVOLVED IN response to glucagon (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 248678126 248680499 + 22301074;30032202 116913095 MODEL JAAIVD010000025;XM_032917231;XM_032917240 XP_032773122;XP_032773131 protein-coding 625908574 LOC116894130 olfactory receptor 52E8-like 2 103945170 103946108 - 22301074 116894130 MODEL JAAIVD010000001;XM_032895849 XP_032751740 protein-coding 625908577 LOC116892898 60S ribosomal protein L34-like 2 199752667 199753519 + 22301074;30032202 116892898 MODEL JAAIVD010000001;XM_032894811 XP_032750702 protein-coding 625908582 Asap3 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of GTPase activity (ortholog); regulation of stress fiber assembly (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog) 1 21993128 22033657 - 22301074;30032202 116894412 MODEL JAAIVD010000025;XM_032896119 XP_032752010 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 3 protein-coding 625908611 LOC116893694 olfactory receptor 5B2-like 2 12992550 12993485 + 22301074;30032202 116893694 MODEL JAAIVD010000001;XM_032895410 XP_032751301 protein-coding 625908614 LOC116892839 uncharacterized LOC116892839 2 191710140 191711890 + 116892839 MODEL JAAIVD010000001;XR_004386977 ncrna 625908619 LOC116899971 arf-GAP domain and FG repeat-containing protein 1-like 5 129841559 129843275 + 116899971 MODEL JAAIVD010000023 pseudo 625908620 Sox30 SRY-box transcription factor 30 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Metastasis (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromocenter (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 28705734 28733517 + 30032202 116910409 MODEL JAAIVD010000002;XM_032914251 XP_032770142 transcription factor SOX-30 protein-coding 625908627 LOC116898493 zinc finger protein 280B-like 4 122293524 122295144 - 116898493 MODEL JAAIVD010000003 pseudo 625908628 ND4L NADH dehydrogenase subunit 4L MT 9862 10158 + 7751807 B7SE69;E1U5S8 REVIEWED EU273707 ABX45245;YP_002791024 protein-coding 625908629 Eaf1 ELL associated factor 1 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN intercellular bridge (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 13 7214380 7225890 + 30032202 116914390 MODEL JAAIVD010000008;XM_032918609 XP_032774500 ELL-associated factor 1 protein-coding 625908638 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92746561 92746632 - 116904853 MODEL JAAIVD010000024 trna 625908639 LOC116899191 uncharacterized LOC116899191 4 88002485 88009513 + 116899191 MODEL JAAIVD010000003;XR_004387695 ncrna 625908645 LOC116894910 U7 small nuclear RNA 2 160472505 160472566 + 116894910 MODEL JAAIVD010000001;XR_004387112 snrna 625908648 Znf414 zinc finger protein 414 1 158774085 158776738 - 116907089 MODEL JAAIVD010000025;XM_032910057;XM_032910065;XM_032910071;XM_032910078 XP_032765948;XP_032765956;XP_032765962;XP_032765969 protein-coding 625908663 Strit1 small transmembrane regulator of ion transport 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN positive regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); positive regulation of calcium ion import (ortholog); positive regulation of calcium ion import into sarcoplasmic reticulum (ortholog); FOUND IN sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) 3 91723328 91726178 + 22301074 116895475 MODEL JAAIVD010000012;XM_032896735;XM_032896736;XR_004387279 XP_032752626;XP_032752627 sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF protein-coding 625908675 LOC116889385 40S ribosomal protein S2-like X 59398626 59399484 + 116889385 MODEL JAAIVD010000014 pseudo 625908676 LOC116902283 bone morphogenetic protein 7-like 5 145092337 145125142 + 22301074;30032202 116902283 MODEL JAAIVD010000023;XM_032904714 XP_032760605 protein-coding 625908686 Cluap1 clusterin associated protein 1 INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); floor plate formation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Joubert syndrome (ortholog); Leber congenital amaurosis (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); ciliary base (ortholog) 9 17906633 17936426 - 30032202 116910068 MODEL JAAIVD010000002;XM_032913881 XP_032769772 clusterin-associated protein 1 protein-coding 625908702 LOC116900021 odorant-binding protein 2a-like 5 11418866 11423130 + 30032202 116900021 MODEL JAAIVD010000023;XM_032901819 XP_032757710 protein-coding 625908711 LOC116904674 uncharacterized LOC116904674 1 153885243 153890512 - 116904674 MODEL JAAIVD010000025;XR_004388376 ncrna 625908715 LOC116913879 eukaryotic initiation factor 4A-II-like 12 14193035 14193803 + 116913879 MODEL JAAIVD010000007 pseudo 625908716 Pak1 p21 (RAC1) activated kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); gamma-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); amygdala development (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN adenosine signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); brain ischemia (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cell-cell junction (ortholog) 2 96140639 96218182 + 22301074;30032202 116891708 MODEL JAAIVD010000001;XM_032892973;XM_032892974;XM_032892975;XM_032892976;XM_032892977 XP_032748864;XP_032748865;XP_032748866;XP_032748867;XP_032748868 serine/threonine-protein kinase PAK 1 protein-coding 625908743 Rabep2 rabaptin, RAB GTPase binding effector protein 2 INVOLVED IN regulation of cilium assembly (ortholog); ASSOCIATED WITH cocaine dependence (ortholog); myoepithelioma (ortholog); nicotine dependence (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 2 75480678 75497515 - 22301074;30032202 116891527 MODEL JAAIVD010000001;XM_032892675 XP_032748566 rab GTPase-binding effector protein 2 protein-coding 625908760 LOC116900116 olfactory receptor 50-like 5 13966842 13967771 + 22301074;30032202 116900116 MODEL JAAIVD010000023;XM_032901892 XP_032757783 protein-coding 625908763 LOC116893770 uncharacterized LOC116893770 2 30099749 30101514 - 116893770 MODEL JAAIVD010000001;XR_004387005 ncrna 625908768 Fam219b family with sequence similarity 219 member B 8 51427052 51432704 + 116908086 MODEL JAAIVD010000027;XM_032911367;XM_032911368;XM_032911369 XP_032767258;XP_032767259;XP_032767260 protein FAM219B protein-coding 625908784 Mybl1 MYB proto-oncogene like 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of piRNA transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); high grade glioma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 144403769 144438672 - 22301074;30032202 116903834 MODEL JAAIVD010000025;XM_032906550;XM_032906558 XP_032762441;XP_032762449 myb-related protein A protein-coding 625908805 Ets1 ETS proto-oncogene 1, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell motility (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN altered p53 signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH celiac disease (ortholog); Experimental Diabetes Mellitus (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 8 28391153 28453884 + 22301074;30032202 116906750 MODEL JAAIVD010000027;XM_032909578 XP_032765469 protein C-ets-1 protein-coding 625908817 Abi1 abl interactor 1 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH3 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lamellipodium morphogenesis (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell leading edge (ortholog); filopodium tip (ortholog); glutamatergic synapse (ortholog) 14 1547249 1625829 + 30032202 116883319 MODEL JAAIVD010000009;XM_032884374;XM_032884375;XM_032884377;XM_032884378;XM_032884379;XM_032884380;XM_032884381;XM_032884382;XM_032884383;XM_032884384 XP_032740265;XP_032740266;XP_032740268;XP_032740269;XP_032740270;XP_032740271;XP_032740272;XP_032740273;XP_032740274;XP_032740275 protein-coding 625908848 Dcst1 DC-STAMP domain containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); sperm-egg recognition (ortholog); FOUND IN plasma membrane (ortholog) 3 64308375 64320022 + 22301074 116896646 MODEL JAAIVD010000012;XM_032897971 XP_032753862 E3 ubiquitin-protein ligase DCST1 protein-coding 625908865 Kyat3 kynurenine aminotransferase 3 ENCODES a protein that exhibits kynurenine-glyoxylate transaminase activity (ortholog); kynurenine-oxoglutarate transaminase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); kynurenine metabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; FOUND IN mitochondrion (ortholog) 3 17993806 18032716 - 22301074;30032202 116896193 MODEL JAAIVD010000012;XM_032897241 XP_032753132 kynurenine--oxoglutarate transaminase 3 protein-coding 625908883 Mis18a MIS18 kinetochore protein A ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); heterochromatin formation (ortholog); FOUND IN CENP-A recruiting complex (ortholog); chromosome, centromeric region (ortholog); cytosol (ortholog) 4 53859846 53879812 + 30032202 116899009 MODEL JAAIVD010000003;XM_032900457 XP_032756348 protein Mis18-alpha protein-coding 625908892 LOC116908897 protein yippee-like 3 9 49920610 49921497 + 116908897 MODEL JAAIVD010000002;XR_004389037 pseudo 625908895 Rnf8 ring finger protein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 4224217 4251512 - 22301074;30032202 116887544 MODEL JAAIVD010000013;XM_032889176 XP_032745067 E3 ubiquitin-protein ligase RNF8 protein-coding 625908907 Ube2c ubiquitin conjugating enzyme E2 C ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-like protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); exit from mitosis (ortholog); free ubiquitin chain polymerization (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Chromosome Aberrations (ortholog); COVID-19 (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 153185658 153188481 - 116900767 MODEL JAAIVD010000023;XM_032902479 XP_032758370 ubiquitin-conjugating enzyme E2 C protein-coding 625908916 LOC116894664 60S ribosomal protein L29-like 2 210000145 210000602 - 116894664 MODEL JAAIVD010000001 pseudo 625908917 Gpr63 G protein-coupled receptor 63 FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 1 118455803 118506709 - 22301074;30032202 116902716 MODEL JAAIVD010000025;XM_032905071 XP_032760962 probable G-protein coupled receptor 63 protein-coding 625908923 Atp5pb ATP synthase peripheral stalk-membrane subunit b ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); substantia nigra development (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 3 52170426 52181796 + 22301074;30032202 116896411 MODEL JAAIVD010000012;XM_032897555 XP_032753446 ATP synthase F(0) complex subunit B1, mitochondrial protein-coding 625908934 Chml CHM like Rab escort protein ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); Rab-protein geranylgeranyltransferase complex (ortholog) 10 54210492 54216573 - 22301074;30032202 116911114 MODEL JAAIVD010000005;XM_032914957;XM_032914958 XP_032770848;XP_032770849 rab proteins geranylgeranyltransferase component A 2 protein-coding 625908944 LOC116894876 U6 spliceosomal RNA 2 95310407 95310509 - 116894876 MODEL JAAIVD010000001;XR_004387088 snrna 625908947 Ptprh protein tyrosine phosphatase receptor type H ENCODES a protein that exhibits cadherin binding (ortholog); INVOLVED IN peptidyl-tyrosine dephosphorylation involved in inactivation of protein kinase activity (ortholog); FOUND IN cytosol (ortholog); microvillus (ortholog); nuclear speck (ortholog) 2 177148719 177185468 - 22301074 116892657 MODEL JAAIVD010000001;XM_032894480 XP_032750371 receptor-type tyrosine-protein phosphatase H protein-coding 625908973 Otud7b OTU deubiquitinase 7B ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mucosal immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Weight Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 61123524 61179076 - 22301074;30032202 116896522 MODEL JAAIVD010000012;XM_032897704 XP_032753595 OTU domain-containing protein 7B protein-coding 625908990 LOC116883759 uncharacterized LOC116883759 14 62867428 62876510 + 116883759 MODEL JAAIVD010000009;XR_004385783 ncrna 625908995 Wdr33 WD repeat domain 33 PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 12335194 12440441 - 22301074;30032202 116884704 MODEL JAAIVD010000010;XM_032885892 XP_032741783 pre-mRNA 3' end processing protein WDR33 protein-coding 625909021 LOC116903709 solute carrier organic anion transporter family member 1A5 6 7727565 7742607 - 22301074;30032202 116903709 MODEL JAAIVD010000024;XM_032906382 XP_032762273 protein-coding 625909034 Foxp3 forkhead box P3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); adult T-cell leukemia/lymphoma (ortholog); Airway Remodeling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 14543453 14550195 - 30032202 116888759 MODEL JAAIVD010000014;XM_032890051 XP_032745942 forkhead box protein P3 protein-coding 625909049 Cldn15 claudin 15 ENCODES a protein that exhibits paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); regulation of intestinal D-glucose absorption (ortholog); regulation of intestinal lipid absorption (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN lateral plasma membrane (ortholog); tight junction (ortholog) 16 17043631 17052380 - 22301074;30032202 116885318 MODEL JAAIVD010000004;XM_032886579;XM_032886580 XP_032742470;XP_032742471 claudin-15 protein-coding 625909062 LOC116906160 cathepsin L1-like 7 98850720 98853140 - 116906160 MODEL JAAIVD010000026;XR_004388584 pseudo 625909066 LOC116906890 uncharacterized LOC116906890 8 72806415 72808960 + 116906890 MODEL JAAIVD010000027;XR_004388778 ncrna 625909071 Gas7 growth arrest specific 7 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN actin filament (ortholog); ruffle (ortholog) 9 47068402 47295965 + 30032202 116909968 MODEL JAAIVD010000002;XM_032913742;XM_032913743;XM_032913744;XM_032913745 XP_032769633;XP_032769634;XP_032769635;XP_032769636 growth arrest-specific protein 7 protein-coding 625909098 LOC116903945 small nuclear ribonucleoprotein E-like 6 101210030 101211295 - 116903945 MODEL JAAIVD010000024 pseudo 625909099 Bcs1l BCS1 ubiquinol-cytochrome c reductase complex chaperone ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH Bjornstad syndrome (ortholog); brain disease (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog) 4 148028263 148032225 + 22301074;30032202 116899506 MODEL JAAIVD010000003;XM_032901357;XM_032901358 XP_032757248;XP_032757249 mitochondrial chaperone BCS1 protein-coding 625909115 LOC116901703 cleavage stimulation factor subunit 3 5 82553348 82574684 + 22301074;30032202 116901703 MODEL JAAIVD010000023;XM_032903832 XP_032759723 protein-coding 625909137 LOC116906055 glyceraldehyde-3-phosphate dehydrogenase-like 7 49220602 49221241 - 116906055 MODEL JAAIVD010000026 pseudo 625909138 LOC116898539 exportin-5-like 4 146459262 146460176 - 116898539 MODEL JAAIVD010000003 pseudo 625909139 LOC116897042 60S ribosomal protein L34-like 3 147453797 147455441 + 116897042 MODEL JAAIVD010000012 pseudo 625909140 Gfpt2 glutamine-fructose-6-phosphate transaminase 2 ENCODES a protein that exhibits glutamine-fructose-6-phosphate transaminase (isomerizing) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 6-phosphate metabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); type 2 diabetes mellitus (ortholog) 9 32461864 32507947 + 22301074;30032202 116909483 MODEL JAAIVD010000002;XM_032913079 XP_032768970 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 protein-coding 625909163 Adgra2 adhesion G protein-coupled receptor A2 INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); Wnt signalosome (ortholog) 13 59392555 59430951 - 22301074;30032202 116914550 MODEL JAAIVD010000008;XM_032918899 XP_032774790 protein-coding 625909186 LOC116893019 calponin-2-like 2 225848834 225849707 - 116893019 MODEL JAAIVD010000001 pseudo 625909187 LOC116890373 U6 spliceosomal RNA 1 125887674 125887779 - 116890373 MODEL JAAIVD010000025;XR_004386588 snrna 625909190 LOC116904488 bcl-2-associated transcription factor 1-like 6 148552579 148555676 + 116904488 MODEL JAAIVD010000024 pseudo 625909191 Pias4 protein inhibitor of activated STAT 4 ENCODES a protein that exhibits DNA binding (ortholog); SUMO ligase activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN central nervous system development (ortholog); DNA damage response (ortholog); hair follicle development (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; Jak-Stat signaling pathway; type II interferon signaling pathway; FOUND IN cytoplasm (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) 1 153719733 153733318 + 22301074;30032202 116904557 MODEL JAAIVD010000025;XM_032907355 XP_032763246 E3 SUMO-protein ligase PIAS4 protein-coding 625909206 Musk muscle associated receptor tyrosine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cochlea development (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); long-term synaptic potentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4C (ortholog); congenital myasthenic syndrome 9 (ortholog); FOUND IN cell projection (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 1 93193901 93284524 - 22301074;30032202 116888495 MODEL JAAIVD010000025;XM_032889780;XM_032889790;XM_032889796;XM_032889803;XM_032889812;XM_032889818 XP_032745671;XP_032745681;XP_032745687;XP_032745694;XP_032745703;XP_032745709 muscle, skeletal receptor tyrosine-protein kinase protein-coding 625909234 LOC116899352 heterogeneous nuclear ribonucleoprotein A1-like 1 103627124 103635085 - 116899352 MODEL JAAIVD010000025 pseudo 625909235 LOC116889461 AP-4 complex subunit sigma-1-like 1 136967746 136968174 + 116889461 MODEL JAAIVD010000025 pseudo 625909236 Flt1 fms related receptor tyrosine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN axitinib pharmacodynamics pathway; bevacizumab pharmacodynamics pathway; glypican signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); angiosarcoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); extracellular space (ortholog) 16 6120306 6290299 + 22301074;30032202 116885447 MODEL JAAIVD010000004;XM_032886730 XP_032742621 vascular endothelial growth factor receptor 1 protein-coding 625909270 LOC116890856 histidine-rich glycoprotein-like 2 7783796 7784641 - 116890856 MODEL JAAIVD010000001;XM_032891421 XP_032747312 protein-coding 625909275 Phf23 PHD finger protein 23 INVOLVED IN negative regulation of autophagosome assembly (ortholog); negative regulation of autophagosome maturation (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 9 49602588 49606313 + 30032202 116909700 MODEL JAAIVD010000002;XM_032913366;XM_032913368 XP_032769257;XP_032769259 protein-coding 625909286 Actrt3 actin related protein T3 FOUND IN male germ cell nucleus (ortholog) 3 124827066 124830203 - 116895555 MODEL JAAIVD010000012;XM_032896792 XP_032752683 actin-related protein T3 protein-coding 625909292 Mettl27 methyltransferase like 27 16 19105410 19114592 - 116885766 MODEL JAAIVD010000004;XM_032887083 XP_032742974 methyltransferase-like protein 27 protein-coding 625909301 LOC116899945 U2 spliceosomal RNA 4 113901009 113901189 - 116899945 MODEL JAAIVD010000003 pseudo 625909302 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42392682 42392754 - 116884174 MODEL JAAIVD010000009 trna 625909303 LOC116891547 60S ribosomal protein L7-like 2 78476074 78476931 + 116891547 MODEL JAAIVD010000001 pseudo 625909304 LOC116894322 mas-related G-protein coupled receptor member B2-like 2 151137766 151138623 + 22301074;30032202 116894322 MODEL JAAIVD010000001;XM_032896016 XP_032751907 protein-coding 625909308 Hes7 hes family bHLH transcription factor 7 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH genetic disease (ortholog); spondylocostal dysostosis (ortholog); spondylocostal dysostosis 2 (ortholog) 9 48719146 48723952 + 22301074;30032202 116910120 MODEL JAAIVD010000002;XM_032913954 XP_032769845 transcription factor HES-7 protein-coding 625909317 Prop1 PROP paired-like homeobox 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); animal organ morphogenesis (ortholog); blood vessel development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 2 (ortholog); FOUND IN transcription regulator complex (ortholog) 9 33600286 33602746 - 22301074;30032202 116908531 MODEL JAAIVD010000002;XM_032911715 XP_032767606 homeobox protein prophet of Pit-1 protein-coding 625909322 Znf570 zinc finger protein 570 2 166075803 166082546 - 22301074 116893374 MODEL JAAIVD010000001;XM_032895173 XP_032751064 protein-coding 625909328 Vstm2l V-set and transmembrane domain containing 2 like INVOLVED IN negative regulation of neuron apoptotic process (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 5 137256992 137286464 + 116902232 MODEL JAAIVD010000023;XM_032904639 XP_032760530 V-set and transmembrane domain-containing protein 2-like protein protein-coding 625909336 LOC116902079 cystatin-C 5 128418077 128421962 - 22301074;30032202 116902079 MODEL JAAIVD010000023;XM_032904370 XP_032760261 protein-coding 625909343 LOC116884671 40S ribosomal protein S9-like 15 75622703 75623268 - 116884671 MODEL JAAIVD010000010 pseudo 625909344 LOC116894102 elongation factor 1-alpha 1-like 2 103515460 103517789 - 116894102 MODEL JAAIVD010000001 pseudo 625909345 Antxr2 ANTXR cell adhesion molecule 2 INVOLVED IN collagen fibril organization (ortholog); single fertilization (ortholog); uterus development (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); anthrax disease (ortholog); congenital myopathy 1A (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 11 6234657 6317428 + 22301074 116912654 MODEL JAAIVD010000006;XM_032916775 XP_032772666 anthrax toxin receptor 2 protein-coding 625909365 Kif3a kinesin family member 3A ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anterior/posterior pattern specification (ortholog); anterograde dendritic transport (ortholog); PARTICIPATES IN Hedgehog signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH asthma (ortholog); bone development disease (ortholog); COVID-19 (ortholog); FOUND IN axon cytoplasm (ortholog); axoneme (ortholog); centriole (ortholog) 9 36054616 36086733 + 22301074;30032202 116908566 MODEL JAAIVD010000002;XM_032911769 XP_032767660 kinesin-like protein KIF3A protein-coding 625909388 LOC116913229 PEST proteolytic signal-containing nuclear protein-like 12 71440086 71440788 + 116913229 MODEL JAAIVD010000007 pseudo 625909389 LOC116890842 insulin-2 2 6790755 6791843 + 22301074;30032202 116890842 MODEL JAAIVD010000001;XM_032891371 XP_032747262 protein-coding 625909396 Ccdc190 coiled-coil domain containing 190 10 49135863 49143172 + 116911180 MODEL JAAIVD010000005;XM_032915047 XP_032770938 coiled-coil domain-containing protein 190 protein-coding 625909404 LOC116887282 glutathione S-transferase theta-3 18 11657772 11663811 + 30032202 116887282 MODEL JAAIVD010000013;XM_032888861;XM_032888862 XP_032744752;XP_032744753 protein-coding 625909416 Pdzd2 PDZ domain containing 2 ASSOCIATED WITH lissencephaly (ortholog); FOUND IN apical part of cell (ortholog); cell-cell junction (ortholog); centriolar satellite (ortholog) 3 168500001 168731105 + 22301074 116897116 MODEL JAAIVD010000012;XM_032898761 XP_032754652 PDZ domain-containing protein 2 protein-coding 625909444 Xpo1 exportin 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); nuclear export signal receptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to salt (ortholog); cellular response to triglyceride (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); atrial fibrillation (ortholog); colorectal cancer (ortholog); FOUND IN annulate lamellae (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 93639648 93681865 - 22301074;30032202 116911960 MODEL JAAIVD010000006;XM_032915880 XP_032771771 exportin-1 protein-coding 625909472 LOC116906671 60S ribosomal protein L29-like 8 37062668 37063135 - 116906671 MODEL JAAIVD010000027 pseudo 625909473 LOC116904521 BTB/POZ domain-containing protein KCTD20-like 6 7295364 7296245 - 116904521 MODEL JAAIVD010000024 pseudo 625909474 LOC116898269 olfactory receptor 6B2-like 4 164448085 164449023 - 22301074 116898269 MODEL JAAIVD010000003;XM_032899621 XP_032755512 protein-coding 625909477 Lpcat3 lysophosphatidylcholine acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN chylomicron assembly (ortholog); endoplasmic reticulum membrane organization (ortholog); intestinal stem cell homeostasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 6 23179668 23220215 - 30032202 116903286 MODEL JAAIVD010000024;XM_032905709 XP_032761600 lysophospholipid acyltransferase 5 protein-coding 625909494 Qrich1 glutamine rich 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); integrated stress response signaling (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleus (ortholog) 8 99850434 99889587 + 116907595 MODEL JAAIVD010000027;XM_032910636;XM_032910637;XM_032910638;XM_032910639;XM_032910640;XM_032910641;XM_032910642;XM_032910643;XM_032910644 XP_032766527;XP_032766528;XP_032766529;XP_032766530;XP_032766531;XP_032766532;XP_032766533;XP_032766534;XP_032766535 glutamine-rich protein 1 protein-coding 625909530 Gsx2 GS homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); central nervous system development (ortholog); forebrain dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Diencephalic-Mesencephalic Junction Dysplasia Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 31847526 31849232 + 22301074;30032202 116912076 MODEL JAAIVD010000006;XM_032915955 XP_032771846 protein-coding 625909535 LOC116883373 estradiol 17 beta-dehydrogenase 5 14 18628859 18647759 + 30032202 116883373 MODEL JAAIVD010000009;XM_032884488;XM_032884489 XP_032740379;XP_032740380 protein-coding 625909551 LOC116891770 40S ribosomal protein S27 2 100137040 100137381 - 22301074;30032202 116891770 MODEL JAAIVD010000001;XM_032893095 XP_032748986 protein-coding 625909556 LOC116897739 60S ribosomal protein L39-like 4 157498974 157499216 + 116897739 MODEL JAAIVD010000003 pseudo 625909557 LOC116906838 olfactory receptor 145-like 8 32298428 32302032 + 22301074;30032202 116906838 MODEL JAAIVD010000027;XM_032909726 XP_032765617 protein-coding 625909561 ND4 NADH dehydrogenase subunit 4 MT 10152 11529 + 7751811 B7SE70 REVIEWED EU273707 ABX45241;YP_002791025 protein-coding 625909562 Pigr polymeric immunoglobulin receptor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); polymeric immunoglobulin binding (ortholog); polymeric immunoglobulin receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); epidermal growth factor receptor signaling pathway (ortholog); Fc receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH IgA glomerulonephritis (ortholog); Stomach Neoplasms (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 10 4953229 4980897 - 30032202 116911146 MODEL JAAIVD010000005;XM_032914998 XP_032770889 protein-coding 625909577 LOC116902521 U7 small nuclear RNA 5 17445267 17445329 + 116902521 MODEL JAAIVD010000023;XR_004388130 snrna 625909580 Cdca8 cell division cycle associated 8 INVOLVED IN chromosome organization (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromocenter (ortholog); chromosome passenger complex (ortholog); chromosome, centromeric region (ortholog) 1 33365781 33381451 + 30032202 116896833 MODEL JAAIVD010000025;XM_032898319;XM_032898330 XP_032754210;XP_032754221 borealin protein-coding 625909597 LOC116887225 olfactory receptor 2A12-like 1 38264039 38265024 + 22301074 116887225 MODEL JAAIVD010000025;XM_032888790 XP_032744681 protein-coding 625909601 LOC116888810 programmed cell death protein 6-like X 88238728 88239051 - 22301074 116888810 MODEL JAAIVD010000014;XM_032890089 XP_032745980 protein-coding 625909606 LOC116914696 uncharacterized LOC116914696 13 1400412 1470489 - 116914696 MODEL JAAIVD010000008;XR_004389763 ncrna 625909610 LOC116890511 olfactory receptor 8S1-like 1 271287058 271290444 + 22301074 116890511 MODEL JAAIVD010000025;XM_032891011 XP_032746902 protein-coding 625909614 LOC116883518 histone H2A type 1-B 14 41886518 41887350 - 22301074;30032202 116883518 MODEL JAAIVD010000009;XM_032884691 XP_032740582 protein-coding 625909618 LOC116888641 40S ribosomal protein S4, X isoform-like X 92312893 92313670 - 116888641 MODEL JAAIVD010000014 pseudo 625909619 Fbxl7 F-box and leucine rich repeat protein 7 INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); protein polyubiquitination (ortholog); FOUND IN centrosome (ortholog); SCF ubiquitin ligase complex (ortholog) 3 153931302 154283178 + 22301074;30032202 116897063 MODEL JAAIVD010000012;XM_032898687 XP_032754578 F-box/LRR-repeat protein 7 protein-coding 625909627 LOC116908343 U7 small nuclear RNA 8 101650813 101650873 + 116908343 MODEL JAAIVD010000027;XR_004388894 snrna 625909630 LOC116890428 U7 small nuclear RNA 1 255811673 255811735 - 116890428 MODEL JAAIVD010000025;XR_004386626 snrna 625909633 Sv2a synaptic vesicle glycoprotein 2A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); modulation of inhibitory postsynaptic potential (ortholog); negative regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Developmental and Epileptic Encephalopathy 113 (ortholog); Experimental Seizures (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 3 61087275 61101798 - 22301074 116896521 MODEL JAAIVD010000012;XM_032897703 XP_032753594 protein-coding 625909650 Dnajc27 DnaJ heat shock protein family (Hsp40) member C27 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN nucleus (ortholog) 7 24748733 24777501 + 22301074 116906022 MODEL JAAIVD010000026;XM_032909074 XP_032764965 dnaJ homolog subfamily C member 27 protein-coding 625909661 LOC116902551 small nucleolar RNA SNORA48 5 42895669 42895809 - 116902551 MODEL JAAIVD010000023;XR_004388152 snorna 625909664 Sptssa serine palmitoyltransferase small subunit A ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); intracellular protein localization (ortholog); sphingosine biosynthetic process (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 90A (ortholog); hereditary spastic paraplegia 90B (ortholog); FOUND IN endoplasmic reticulum (ortholog); serine palmitoyltransferase complex (ortholog) 7 68027128 68038800 - 30032202 116905047 MODEL JAAIVD010000026;XM_032907735 XP_032763626 protein-coding 625909670 Nrp2 neuropilin 2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 4 136712040 136824982 + 22301074 116899440 MODEL JAAIVD010000003;XM_032901197;XM_032901198 XP_032757088;XP_032757089 neuropilin-2 protein-coding 625909697 Vezf1 vascular endothelial zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); endothelial cell development (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH Dilated Cardiomyopathy 1OO (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 9 82727346 82743536 - 30032202 116908837 MODEL JAAIVD010000002;XM_032912258;XM_032912259 XP_032768149;XP_032768150 protein-coding 625909711 Tmem269 transmembrane protein 269 1 37733054 37743577 + 116887094 MODEL JAAIVD010000025;XM_032888608 XP_032744499 protein-coding 625909720 Crb2 crumbs cell polarity complex component 2 ENCODES a protein that exhibits aspartic-type endopeptidase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circulatory system development (ortholog); establishment of cell polarity (ortholog); ingression involved in gastrulation with mouth forming second (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); focal segmental glomerulosclerosis 9 (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 5 15543547 15565137 + 22301074 116901361 MODEL JAAIVD010000023;XM_032903213 XP_032759104 protein crumbs homolog 2 protein-coding 625909737 Prima1 proline rich membrane anchor 1 ENCODES a protein that exhibits enzyme binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); muscular dystrophy (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) 7 114472981 114524552 - 116905367 MODEL JAAIVD010000026;XM_032908300 XP_032764191 proline-rich membrane anchor 1 protein-coding 625909746 Tbxas1 thromboxane A synthase 1 ENCODES a protein that exhibits heme binding (ortholog); hydroperoxy icosatetraenoate dehydratase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); intracellular chloride ion homeostasis (ortholog); long-chain fatty acid biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Alcoholic Liver Diseases (ortholog); arteriosclerosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 6 100714516 100882886 - 22301074;30032202 116903938 MODEL JAAIVD010000024;XM_032906715 XP_032762606 thromboxane-A synthase protein-coding 625909763 LOC116893561 40S ribosomal protein S2-like 2 215704559 215705860 + 116893561 MODEL JAAIVD010000001 pseudo 625909764 LOC116892445 cytochrome P450 2S1 ENCODES a protein that exhibits hydro-lyase activity (ortholog); monooxygenase activity (ortholog); thromboxane-A synthase activity (ortholog); INVOLVED IN icosanoid metabolic process (ortholog); prostaglandin metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); psoriasis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 168980960 168996564 + 22301074;30032202 116892445 MODEL JAAIVD010000001;XM_032894146 XP_032750037 protein-coding 625909777 Ahsa1 activator of HSP90 ATPase activity 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp90 protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN maintenance of unfolded protein (ortholog); positive regulation of ATP-dependent activity (ortholog); FOUND IN cytosol (ortholog) 7 101363538 101371277 + 22301074;30032202 116905322 MODEL JAAIVD010000026;XM_032908214 XP_032764105 activator of 90 kDa heat shock protein ATPase homolog 1 protein-coding 625909790 Clec3a C-type lectin domain family 3 member A 17 34055508 34065070 + 116886254 MODEL JAAIVD010000011;XM_032887675 XP_032743566 protein-coding 625909797 Gatad2b GATA zinc finger domain containing 2B INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); GAND syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 63272576 63348107 - 22301074;30032202 116896613 MODEL JAAIVD010000012;XM_032897869;XM_032897870;XM_032897872;XM_032897873 XP_032753760;XP_032753761;XP_032753763;XP_032753764 transcriptional repressor p66-beta protein-coding 625909825 LOC116895098 small nucleolar RNA U13 2 81106144 81106240 + 116895098 MODEL JAAIVD010000001 pseudo 625909826 Bst2 bone marrow stromal cell antigen 2 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN defense response to virus (ortholog); innate immune response (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); brain glioma (ortholog); chikungunya (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 13453700 13457226 + 22301074;30032202 116914585 MODEL JAAIVD010000008;XM_032918942 XP_032774833 bone marrow stromal antigen 2 protein-coding 625909835 LOC116914263 uncharacterized LOC116914263 1 251978417 251986332 + 116914263 MODEL JAAIVD010000025;XR_004389740;XR_004389741 ncrna 625909841 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42440183 42440254 - 116884183 MODEL JAAIVD010000009 trna 625909842 LOC116900992 Ig kappa chain V-V region L7-like 5 109463295 109463889 + 116900992 MODEL JAAIVD010000023 pseudo 625909843 Tefm transcription elongation factor, mitochondrial ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); transcription elongation factor activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); positive regulation of mitochondrial transcription (ortholog); regulation of oxidative phosphorylation (ortholog); ASSOCIATED WITH Combined Oxidative Phosphorylation Deficiency 58 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 9 90287802 90292483 + 22301074;30032202 116909918 MODEL JAAIVD010000002;XM_032913681 XP_032769572 protein-coding 625909851 Eepd1 endonuclease/exonuclease/phosphatase family domain containing 1 INVOLVED IN positive regulation of cholesterol efflux (ortholog); FOUND IN plasma membrane (ortholog) 8 21412045 21513080 + 22301074;30032202 116906615 MODEL JAAIVD010000027;XM_032909373 XP_032765264 endonuclease/exonuclease/phosphatase family domain-containing protein 1 protein-coding 625909862 LOC116893157 tripartite motif-containing protein 30A-like 2 101347254 101355014 + 22301074 116893157 MODEL JAAIVD010000001;XM_032895074 XP_032750965 protein-coding 625909869 Sf3a1 splicing factor 3a subunit 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 11 73143630 73164460 + 22301074;30032202 116912844 MODEL JAAIVD010000006;XM_032917050 XP_032772941 protein-coding 625909889 LOC116885819 40S ribosomal protein S17-like 16 37077804 37078207 - 116885819 MODEL JAAIVD010000004 pseudo 625909890 Lhx8 LIM homeobox 8 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN female gonad development (ortholog); forebrain neuron development (ortholog); forebrain neuron differentiation (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN female germ cell nucleus (ortholog) 3 7124969 7146779 + 22301074;30032202 116895280 MODEL JAAIVD010000012;XM_032896594;XM_032896595 XP_032752485;XP_032752486 LIM/homeobox protein Lhx8 protein-coding 625909907 LOC116891617 oocyte-secreted protein 3-like 2 11153247 11167537 - 116891617 MODEL JAAIVD010000001;XM_032892824 XP_032748715 protein-coding 625909914 LOC116909582 keratin-associated protein 4-12-like 9 54491700 54492254 - 22301074;30032202 116909582 MODEL JAAIVD010000002;XM_032913202;XM_032913203 XP_032769093;XP_032769094 protein-coding 625909921 LOC116914111 small nucleolar RNA SNORA51 12 90474778 90474905 + 116914111 MODEL JAAIVD010000007;XR_004389676 snorna 625909924 Runx1 RUNX family transcription factor 1 ENCODES a protein that exhibits calcium ion binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); central nervous system development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 4 51787352 52016639 + 22301074;30032202 116898977 MODEL JAAIVD010000003;XM_032900402;XM_032900403 XP_032756293;XP_032756294 runt-related transcription factor 1 protein-coding 625909938 LOC116912818 small nuclear ribonucleoprotein Sm D2-like 11 32320434 32320783 + 116912818 MODEL JAAIVD010000006 pseudo 625909939 Cdc5l cell division cycle 5 like ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-2 (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH CAKUT (ortholog); esophagus adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) 4 84454349 84491979 + 30032202 116899138 MODEL JAAIVD010000003;XM_032900674 XP_032756565 cell division cycle 5-like protein protein-coding 625909959 Cfap46 cilia and flagella associated protein 46 ASSOCIATED WITH visceral heterotaxy (ortholog); visceral heterotaxy 5 (ortholog) 2 62170202 62256480 + 22301074;30032202 116891359 MODEL JAAIVD010000001;XM_032892355 XP_032748246 cilia- and flagella-associated protein 46 protein-coding 625910022 Rb1cc1 RB1 inducible coiled-coil 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); defense response to virus (ortholog); PARTICIPATES IN autophagy pathway; mTOR signaling pathway; ASSOCIATED WITH breast adenocarcinoma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome membrane (ortholog); cytosol (ortholog) 1 141399037 141464457 + 30032202 116903767 MODEL JAAIVD010000025;XM_032906458;XM_032906466 XP_032762349;XP_032762357 RB1-inducible coiled-coil protein 1 protein-coding 625910053 Trappc12 trafficking protein particle complex subunit 12 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND SPASTICITY (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); kinetochore (ortholog) 7 42138789 42204073 - 22301074;30032202 116904932 MODEL JAAIVD010000026;XM_032907563;XM_032907564 XP_032763454;XP_032763455 trafficking protein particle complex 12 protein-coding 625910072 LOC116889520 small nucleolar RNA SNORA17 X 35014585 35014716 - 116889520 MODEL JAAIVD010000014;XR_004386462 snorna 625910075 Calm2 calmodulin 2 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); cannabis abuse (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) 7 5532140 5544874 + 22301074;30032202 116905747 MODEL JAAIVD010000026;XM_032908716 XP_032764607 calmodulin-2 protein-coding 625910084 Adgrg6 adhesion G protein-coupled receptor G6 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); laminin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cartilage development (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); genetic disease (ortholog); idiopathic scoliosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 2 222716702 222787056 + 22301074;30032202 116893574 MODEL JAAIVD010000001;XM_032895281 XP_032751172 adhesion G-protein coupled receptor G6 protein-coding 625910111 Slc7a10 solute carrier family 7 member 10 ENCODES a protein that exhibits neutral L-amino acid transmembrane transporter activity (ortholog); INVOLVED IN D-alanine transmembrane transport (ortholog); D-serine transmembrane transport (ortholog); glycine transport (ortholog); FOUND IN apical dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 2 163478622 163493602 - 22301074;30032202 116892270 MODEL JAAIVD010000001;XM_032893859;XM_032893860;XM_032893861 XP_032749750;XP_032749751;XP_032749752 asc-type amino acid transporter 1 protein-coding 625910130 Srpx2 sushi repeat containing protein X-linked 2 ENCODES a protein that exhibits hepatocyte growth factor binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); ROLANDIC EPILEPSY, INTELLECTUAL DISABILITY, AND SPEECH DYSPRAXIA, X-LINKED (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); excitatory synapse (ortholog) X 86231326 86252033 + 116888041 MODEL JAAIVD010000014;XM_032889439 XP_032745330 sushi repeat-containing protein SRPX2 protein-coding 625910143 LOC116908820 lys-63-specific deubiquitinase BRCC36-like 1 186915586 186918695 - 22301074;30032202 116908820 MODEL JAAIVD010000025;XM_032912242 XP_032768133 protein-coding 625910148 Lck LCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits antigen binding (ortholog); ATPase binding (ortholog); CD4 receptor binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); CD27 signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); dilated cardiomyopathy (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) 1 28575229 28602885 + 22301074;30032202 116896108 MODEL JAAIVD010000025;XM_032897075;XM_032897081 XP_032752966;XP_032752972 tyrosine-protein kinase Lck protein-coding 625910168 LOC116904657 U7 small nuclear RNA 6 43272179 43272241 + 116904657 MODEL JAAIVD010000024;XR_004388357 snrna 625910171 Dbn1 drebrin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal motor inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell communication by chemical coupling (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Down syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); asymmetric synapse (ortholog) 14 73789411 73803625 - 30032202 116883307 MODEL JAAIVD010000009;XM_032884355;XM_032884357;XM_032884358;XM_032884359;XM_032884360;XM_032884361 XP_032740246;XP_032740248;XP_032740249;XP_032740250;XP_032740251;XP_032740252 drebrin protein-coding 625910199 LOC116890448 small nucleolar RNA SNORD103/SNORD85 1 27560095 27560177 - 116890448 MODEL JAAIVD010000025;XR_004386640 snorna 625910202 Kbtbd8 kelch repeat and BTB domain containing 8 INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); protein monoubiquitination (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) 6 51818472 51831017 - 22301074 116903481 MODEL JAAIVD010000024;XM_032906047 XP_032761938 kelch repeat and BTB domain-containing protein 8 protein-coding 625910210 Osbpl9 oxysterol binding protein like 9 FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 1 45656920 45796259 + 30032202 116898987 MODEL JAAIVD010000025;XM_032900421;XM_032900430;XM_032900439;XM_032900447;XM_032900455 XP_032756312;XP_032756321;XP_032756330;XP_032756338;XP_032756346 oxysterol-binding protein-related protein 9 protein-coding 625910245 Atp2b3 ATPase plasma membrane Ca2+ transporting 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); P-type calcium transporter activity involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); PDZ domain binding (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); neural retina development (ortholog); regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Developmental Disabilities (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); parallel fiber (ortholog) X 129120862 129188485 + 22301074;30032202 116888318 MODEL JAAIVD010000014;XM_032889591 XP_032745482 plasma membrane calcium-transporting ATPase 3 protein-coding 625910271 Wbp2nl WBP2 N-terminal like INVOLVED IN regulation of cytosolic calcium ion concentration (ortholog); FOUND IN sperm flagellum (ortholog); sperm head (ortholog) 1 252026571 252041883 + 30032202 116890056 MODEL JAAIVD010000025;XM_032890826 XP_032746717 postacrosomal sheath WW domain-binding protein protein-coding 625910280 LOC116893726 olfactory receptor 9I1-like 2 13789096 13790058 - 22301074;30032202 116893726 MODEL JAAIVD010000001;XM_032895439 XP_032751330 protein-coding 625910283 Trmt9b tRNA methyltransferase 9B (putative) ENCODES a protein that exhibits tRNA methyltransferase activity (ortholog) 13 50587750 50636992 - 22301074;30032202 116914629 MODEL JAAIVD010000008;XM_032919016;XM_032919017;XM_032919018 XP_032774907;XP_032774908;XP_032774909 probable tRNA methyltransferase 9B protein-coding 625910299 LOC116888102 stress-induced-phosphoprotein 1-like X 98270101 98284541 + 116888102 MODEL JAAIVD010000014 pseudo 625910300 LOC116890417 U7 small nuclear RNA 1 264756161 264756220 - 116890417 MODEL JAAIVD010000025;XR_004386617 snrna 625910303 LOC116904480 protein phosphatase 1 regulatory subunit 3B-like 6 142030360 142031061 + 30032202 116904480 MODEL JAAIVD010000024;XM_032907283 XP_032763174 protein-coding 625910306 Mgme1 mitochondrial genome maintenance exonuclease 1 ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); obsolete mitochondrial genome maintenance (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Emaciation (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 5 123916009 123924590 + 30032202 116902041 MODEL JAAIVD010000023;XM_032904324;XM_032904326 XP_032760215;XP_032760217 protein-coding 625910318 Efna4 ephrin A4 ENCODES a protein that exhibits ephrin receptor binding (ortholog) 3 64332480 64336703 + 22301074;30032202 116896648 MODEL JAAIVD010000012;XM_032897977 XP_032753868 ephrin-A4 protein-coding 625910326 LOC116905558 protein max-like 7 49488917 49491010 - 116905558 MODEL JAAIVD010000026 pseudo 625910327 Park7 Parkinsonism associated deglycase ENCODES a protein that exhibits copper ion binding (ortholog); cupric ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); androgen receptor signaling pathway (ortholog); cellular detoxification of aldehyde (ortholog); PARTICIPATES IN Parkinson's disease pathway; transforming growth factor-beta signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); cerebral infarction (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); cell body (ortholog); chromatin (ortholog) 1 9846468 9863080 + 30032202 116892438 MODEL JAAIVD010000025;XM_032894131;XM_032894141 XP_032750022;XP_032750032 protein/nucleic acid deglycase DJ-1 protein-coding 625910341 LOC116888773 eukaryotic translation initiation factor 4B-like X 75575626 75577560 - 116888773 MODEL JAAIVD010000014 pseudo 625910342 LOC116906381 small nucleolar RNA SNORD113/SNORD114 family 7 127264067 127264141 + 116906381 MODEL JAAIVD010000026;XR_004388651 snorna 625910345 Rps6kl1 ribosomal protein S6 kinase like 1 7 99243704 99258878 - 22301074 116905288 MODEL JAAIVD010000026;XM_032908148 XP_032764039 ribosomal protein S6 kinase-like 1 protein-coding 625910358 LOC116906724 zinc finger protein OZF-like 8 18464485 18478638 - 22301074 116906724 MODEL JAAIVD010000027;XM_032909535 XP_032765426 protein-coding 625910367 LOC116883184 chromobox protein homolog 3-like 14 32316189 32316614 - 116883184 MODEL JAAIVD010000009 pseudo 625910368 Uba5 ubiquitin like modifier activating enzyme 5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); UFM1 activating enzyme activity (ortholog); zinc ion binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); megakaryocyte differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 24 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 8 95361207 95377698 - 30032202 116907422 MODEL JAAIVD010000027;XM_032910388;XM_032910389 XP_032766279;XP_032766280 ubiquitin-like modifier-activating enzyme 5 protein-coding 625910387 LOC116892133 galactoside 2-alpha-L-fucosyltransferase 3-like 2 153834947 153840634 + 22301074;30032202 116892133 MODEL JAAIVD010000001;XM_032893622 XP_032749513 protein-coding 625910392 LOC116888562 glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial-like X 59472563 59473145 + 116888562 MODEL JAAIVD010000014 pseudo 625910393 LOC116914024 uncharacterized LOC116914024 12 80873390 81277079 - 116914024 MODEL JAAIVD010000007;XR_004389658 ncrna 625910398 LOC116884948 rRNA 2'-O-methyltransferase fibrillarin-like 15 28459047 28460135 - 116884948 MODEL JAAIVD010000010 pseudo 625910399 Znfx1 zinc finger NFX1-type containing 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); defense response to bacterium (ortholog); defense response to virus (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 91 (ortholog); FOUND IN cytoplasmic stress granule (ortholog); mitochondrial outer membrane (ortholog) 5 150913680 150941143 + 22301074;30032202 116902315 MODEL JAAIVD010000023;XM_032904762;XM_032904763 XP_032760653;XP_032760654 NFX1-type zinc finger-containing protein 1 protein-coding 625910420 LOC116902842 GTPase IMAP family member 7-like 6 92247198 92251761 - 22301074 116902842 MODEL JAAIVD010000024;XM_032905172 XP_032761063 protein-coding 625910426 Tceal3 transcription elongation factor A like 3 X 88426145 88427044 + 116888486 MODEL JAAIVD010000014;XM_032889761 XP_032745652 transcription elongation factor A protein-like 3 protein-coding 625910431 LOC116893401 60S ribosomal protein L28-like 2 172098739 172101627 - 116893401 MODEL JAAIVD010000001 pseudo 625910432 LOC116913174 ubiquitin-conjugating enzyme E2 N-like 12 55471037 55484040 - 116913174 MODEL JAAIVD010000007 pseudo 625910433 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56583670 56583741 + 116910808 MODEL JAAIVD010000002 trna 625910434 LOC116910678 small nucleolar RNA SNORA15 9 79618249 79618378 + 116910678 MODEL JAAIVD010000002;XR_004389209 snorna 625910437 LOC116910378 WAP four-disulfide core domain protein 18-like 9 87019931 87020988 - 22301074 116910378 MODEL JAAIVD010000002;XM_032914224 XP_032770115 protein-coding 625910442 Plekha4 pleckstrin homology domain containing A4 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) 2 153960122 153983411 - 116892142 MODEL JAAIVD010000001;XM_032893632 XP_032749523 pleckstrin homology domain-containing family A member 4 protein-coding 625910466 Galnt11 polypeptide N-acetylgalactosaminyltransferase 11 ENCODES a protein that exhibits Notch binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via threonine (ortholog) 6 154434392 154467483 + 30032202 116904225 MODEL JAAIVD010000024;XM_032907162 XP_032763053 protein-coding 625910482 LOC116887997 ATP-dependent RNA helicase DHX29-like X 75323514 75325624 - 30032202 116887997 MODEL JAAIVD010000014;XM_032889423 XP_032745314 protein-coding 625910487 LOC116894971 small nucleolar RNA SNORA4 2 98916867 98917007 - 116894971 MODEL JAAIVD010000001;XR_004387163 snorna 625910490 Ednrb endothelin receptor type B ENCODES a protein that exhibits endothelin receptor activity (ortholog); peptide hormone binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); calcium ion transmembrane transport (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase signaling pathway; endothelin signaling pathway; inflammatory response pathway; ASSOCIATED WITH ABCD syndrome (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) 12 20907635 20937127 + 22301074 116913523 MODEL JAAIVD010000007;XM_032917725 XP_032773616 protein-coding 625910501 Ildr2 immunoglobulin like domain containing receptor 2 INVOLVED IN cell differentiation (ortholog); homeostasis of number of cells within a tissue (ortholog); insulin secretion (ortholog); FOUND IN tight junction (ortholog) 10 45359290 45426123 + 30032202 116911002 MODEL JAAIVD010000005;XM_032914727;XM_032914728;XM_032914729 XP_032770618;XP_032770619;XP_032770620 immunoglobulin-like domain-containing receptor 2 protein-coding 625910524 LOC116895976 iron-sulfur cluster assembly 1 homolog, mitochondrial-like 3 156968587 156968968 - 116895976 MODEL JAAIVD010000012 pseudo 625910525 Wnt2b Wnt family member 2B INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to starvation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Diarrhea 9 (ortholog); endodermal sinus tumor (ortholog); Failure to Thrive (ortholog) 3 53158312 53166484 + 22301074;30032202 116896422 MODEL JAAIVD010000012;XM_032897568 XP_032753459 protein Wnt-2b protein-coding 625910533 Taf7l TATA-box binding protein associated factor 7 like INVOLVED IN flagellated sperm motility (ortholog); spermatid development (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) X 86784209 86796357 - 22301074;30032202 116888046 MODEL JAAIVD010000014;XM_032889442 XP_032745333 transcription initiation factor TFIID subunit 7-like protein-coding 625910548 Brd1 bromodomain containing 1 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); response to electrical stimulus (ortholog); response to immobilization stress (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); bipolar disorder (ortholog); Experimental Seizures (ortholog); FOUND IN dendrite (ortholog); histone H3-K14 acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) 1 258008312 258056352 - 22301074;30032202 116914801 MODEL JAAIVD010000025;XM_032919255;XM_032919263;XM_032919271;XR_004389771 XP_032775146;XP_032775154;XP_032775162 bromodomain-containing protein 1 protein-coding 625910571 C5 complement C5 ENCODES a protein that exhibits C5a anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN chemotaxis (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 5 586299 670215 + 22301074 116900035 MODEL JAAIVD010000023;XM_032901831 XP_032757722 protein-coding 625910616 Sirt5 sirtuin 5 ENCODES a protein that exhibits NAD+ binding (ortholog); protein-glutaryllysine deglutarylase activity (ortholog); protein-malonyllysine demalonylase activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of reactive oxygen species metabolic process (ortholog); peptidyl-lysine demalonylation (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 14 62375274 62402861 + 22301074 116883383 MODEL JAAIVD010000009;XM_032884501 XP_032740392 NAD-dependent protein deacylase sirtuin-5, mitochondrial protein-coding 625910629 Dbh dopamine beta-hydroxylase ENCODES a protein that exhibits copper ion binding (ortholog); dopamine beta-monooxygenase activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral response to ethanol (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH Anorexia (ortholog); attention deficit hyperactivity disorder (ortholog); brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); centriolar satellite (ortholog) 5 9479774 9496457 - 22301074;30032202 116900070 MODEL JAAIVD010000023;XM_032901860 XP_032757751 protein-coding 625910644 LOC116893111 40S ribosomal protein S21-like 2 68701391 68701676 - 116893111 MODEL JAAIVD010000001 pseudo 625910645 Sptbn5 spectrin beta, non-erythrocytic 5 ENCODES a protein that exhibits actin filament binding (ortholog); dynactin binding (ortholog); dynein intermediate chain binding (ortholog); INVOLVED IN Golgi organization (ortholog); lysosomal transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN apical cortex (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) 5 98201483 98237994 - 30032202 116901825 MODEL JAAIVD010000023;XM_032903986 XP_032759877 spectrin beta chain, non-erythrocytic 5 protein-coding 625910708 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 154632937 154633010 - 116890643 MODEL JAAIVD010000025 trna 625910709 LOC116885916 prothymosin alpha-like 1 3032278 3032578 - 116885916 MODEL JAAIVD010000025 pseudo 625910710 LOC116894276 vomeronasal type-1 receptor 4-like 2 121585674 121586630 - 22301074;30032202 116894276 MODEL JAAIVD010000001;XM_032895988 XP_032751879 protein-coding 625910714 LOC116912723 uncharacterized LOC116912723 11 14132514 14141263 - 116912723 MODEL JAAIVD010000006;XR_004389474 ncrna 625910726 LOC116914173 U6 spliceosomal RNA 12 9468788 9468895 + 116914173 MODEL JAAIVD010000007;XR_004389717 snrna 625910729 Strn striatin ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); calmodulin binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); locomotory behavior (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN bicellular tight junction (ortholog); dendritic spine (ortholog); FAR/SIN/STRIPAK complex (ortholog) 7 14494995 14575713 + 30032202 116905904 MODEL JAAIVD010000026;XM_032908894 XP_032764785 protein-coding 625910751 Pabpc1l2b poly(A) binding protein cytoplasmic 1 like 2B X 60289071 60291562 + 30032202 116888548 MODEL JAAIVD010000014;XM_032889856 XP_032745747 polyadenylate-binding protein 1-like 2 protein-coding 625910756 LOC116887232 elongation factor 2-like 18 10856923 10859615 - 116887232 MODEL JAAIVD010000013 pseudo 625910757 Rpsa ribosomal protein SA ENCODES a protein that exhibits DNA binding (ortholog); laminin binding (ortholog); ribosome binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cell-cell adhesion (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arrhythmogenic right ventricular dysplasia 5 (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) 8 111355541 111359462 + 22301074;30032202 116907936 MODEL JAAIVD010000027;XM_032911153 XP_032767044 40S ribosomal protein SA protein-coding 625910768 Vwf von Willebrand factor ENCODES a protein that exhibits collagen binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); blood coagulation (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 6 22217359 22342060 - 22301074;30032202 116903854 MODEL JAAIVD010000024;XM_032906594 XP_032762485 protein-coding 625910822 LOC116899545 U3 small nucleolar RNA-associated protein 14 homolog B 4 151877022 151881546 + 30032202 116899545 MODEL JAAIVD010000003;XM_032901436 XP_032757327 protein-coding 625910828 LOC116895366 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 3 50908578 50908885 + 22301074;30032202 116895366 MODEL JAAIVD010000012;XM_032896663 XP_032752554 protein-coding 625910832 Shc1 SHC adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); epidermal growth factor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); Shc-EGFR complex (ortholog) 3 64236116 64247635 - 22301074;30032202 116896639 MODEL JAAIVD010000012;XM_032897957;XM_032897958 XP_032753848;XP_032753849 SHC-transforming protein 1 protein-coding 625910852 Esrp2 epithelial splicing regulatory protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH cleft lip (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 25869825 25876768 - 22301074;30032202 116886703 MODEL JAAIVD010000011;XM_032888209;XM_032888210;XM_032888211 XP_032744100;XP_032744101;XP_032744102 protein-coding 625910883 LOC116899938 U2 spliceosomal RNA 4 126057343 126057535 - 116899938 MODEL JAAIVD010000003;XR_004387905 snrna 625910886 Gnai1 G protein subunit alpha i1 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); adenylate cyclase regulator activity (ortholog); D2 dopamine receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amnestic disorder (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN cell cortex (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 6 147629014 147711232 - 22301074;30032202 116904160 MODEL JAAIVD010000024;XM_032907058 XP_032762949 guanine nucleotide-binding protein G(i) subunit alpha-1 protein-coding 625910898 Chrm2 cholinergic receptor muscarinic 2 ENCODES a protein that exhibits arrestin family protein binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); Bradycardia (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) 6 103297642 103435482 - 22301074;30032202 116903963 MODEL JAAIVD010000024;XM_032906757 XP_032762648 muscarinic acetylcholine receptor M2 protein-coding 625910905 LOC116900243 olfactory receptor 998-like 5 62949473 62950417 + 22301074;30032202 116900243 MODEL JAAIVD010000023;XM_032901994 XP_032757885 protein-coding 625910908 Tma16 translation machinery associated 16 homolog ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 13 22767796 22783870 + 30032202 116914669 MODEL JAAIVD010000008;XM_032919074 XP_032774965 translation machinery-associated protein 16 protein-coding 625910919 Bbs2 Bardet-Biedl syndrome 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/2, Digenic (ortholog); FOUND IN BBSome (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) 17 977093 1011966 - 22301074;30032202 116886265 MODEL JAAIVD010000011;XM_032887687 XP_032743578 Bardet-Biedl syndrome 2 protein protein-coding 625910940 LOC116889507 small nucleolar RNA SNORA17 X 81046341 81046471 + 116889507 MODEL JAAIVD010000014;XR_004386453 snorna 625910943 Dnajc12 DnaJ heat shock protein family (Hsp40) member C12 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 18 23312976 23328428 - 30032202 116887000 MODEL JAAIVD010000013;XM_032888482 XP_032744373 dnaJ homolog subfamily C member 12 protein-coding 625910952 Fabp1 fatty acid binding protein 1 ENCODES a protein that exhibits antioxidant activity (ortholog); bile acid binding (ortholog); binding (ortholog); INVOLVED IN acylglycerol biosynthetic process (ortholog); acylglycerol metabolic process (ortholog); adult feeding behavior (ortholog); ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Liver Failure (ortholog); end stage renal disease (ortholog); FOUND IN apical cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 74217675 74221431 + 30032202 116903678 MODEL JAAIVD010000024;XM_032906338 XP_032762229 fatty acid-binding protein, liver protein-coding 625910960 Ppip5k2 diphosphoinositol pentakisphosphate kinase 2 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); ATP binding (ortholog); inositol hexakisphosphate kinase activity (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 100 (ortholog); keratoconus (ortholog); nonsyndromic deafness (ortholog); FOUND IN cytosol (ortholog) 4 168748322 168813883 + 30032202 116899684 MODEL JAAIVD010000003;XM_032901706;XM_032901707 XP_032757597;XP_032757598 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 protein-coding 625910998 Fer1l5 fer-1 like family member 5 INVOLVED IN binding of sperm to zona pellucida (ortholog); membrane fusion involved in acrosome reaction (ortholog); myoblast fusion (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); plasma membrane (ortholog) 4 112588822 112640898 + 22301074;30032202 116899287 MODEL JAAIVD010000003;XM_032900919 XP_032756810 fer-1-like protein 5 protein-coding 625911054 Clec3b C-type lectin domain family 3 member B ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); kringle domain binding (ortholog); INVOLVED IN bone mineralization (ortholog); ossification (ortholog); positive regulation of plasminogen activation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); retinal macular dystrophy 4 (ortholog); Scheuermann's disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); granular component (ortholog) 8 114286582 114292325 + 116907024 MODEL JAAIVD010000027;XM_032909964 XP_032765855 tetranectin protein-coding 625911061 Tmem220 transmembrane protein 220 9 46628722 46637293 + 116909167 MODEL JAAIVD010000002;XM_032912657 XP_032768548 protein-coding 625911071 Fbxo8 F-box protein 8 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN ubiquitin ligase complex (ortholog) 13 32126087 32169593 + 22301074 116915079 MODEL JAAIVD010000008;XM_032919501;XM_032919502;XM_032919503 XP_032775392;XP_032775393;XP_032775394 F-box only protein 8 protein-coding 625911087 LOC116884908 protocadherin alpha-6-like 15 7400804 7403721 - 22301074 116884908 MODEL JAAIVD010000010;XM_032886130 XP_032742021 protein-coding 625911091 LOC116894188 olfactory receptor 478 2 106062652 106063596 - 22301074;30032202 116894188 MODEL JAAIVD010000001;XM_032895903 XP_032751794 protein-coding 625911094 L3mbtl1 L3MBTL histone methyl-lysine binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H1 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); constitutive heterochromatin formation (ortholog); hemopoiesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); chromatin lock complex (ortholog); condensed chromosome (ortholog) 5 155007706 155034100 - 22301074 116902390 MODEL JAAIVD010000023;XM_032904908 XP_032760799 lethal(3)malignant brain tumor-like protein 1 protein-coding 625911119 Raver1 ribonucleoprotein, PTB binding 1 ASSOCIATED WITH genetic disease (ortholog) 8 17335785 17354596 - 22301074 116906861 MODEL JAAIVD010000027;XM_032909764 XP_032765655 ribonucleoprotein PTB-binding 1 protein-coding 625911136 LOC116895606 uncharacterized LOC116895606 3 157721317 157724377 - 116895606 MODEL JAAIVD010000012;XR_004387293 ncrna 625911140 Htt huntingtin ENCODES a protein that exhibits beta-tubulin binding (ortholog); diazepam binding (ortholog); dynactin binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); associative learning (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH Cadmium Poisoning (ortholog); cerebral palsy (ortholog); genetic disease (ortholog); FOUND IN autophagosome (ortholog); axon (ortholog); centriole (ortholog) 11 70172908 70315186 - 22301074;30032202 116911942 MODEL JAAIVD010000006;XM_032915843 XP_032771734 protein-coding 625911211 LOC116912532 YTH domain-containing family protein 2 11 45341388 45343303 + 30032202 116912532 MODEL JAAIVD010000006;XM_032916636 XP_032772527 protein-coding 625911216 LOC116883610 basic proline-rich protein-like 14 65422130 65424353 + 116883610 MODEL JAAIVD010000009;XM_032884800 XP_032740691 protein-coding 625911222 Tyw5 tRNA-yW synthesizing protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN wybutosine biosynthetic process (ortholog) 4 132242199 132260048 - 30032202 116899402 MODEL JAAIVD010000003;XM_032901132;XM_032901133;XM_032901134;XM_032901135;XM_032901136;XM_032901137;XM_032901138 XP_032757023;XP_032757024;XP_032757025;XP_032757026;XP_032757027;XP_032757028;XP_032757029 tRNA wybutosine-synthesizing protein 5 protein-coding 625911252 Smim14 small integral membrane protein 14 INVOLVED IN blastocyst hatching (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 22474692 22523569 - 30032202 116912095 MODEL JAAIVD010000006;XM_032915984;XM_032915985;XM_032915986 XP_032771875;XP_032771876;XP_032771877 protein-coding 625911267 Mboat4 membrane bound ghrelin O-acyltransferase MBOAT4 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); serine O-acyltransferase activity (ortholog); INVOLVED IN peptidyl-serine octanoylation (ortholog); protein acylation (ortholog); protein decanoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 52906060 52914245 - 30032202 116914647 MODEL JAAIVD010000008;XM_032919043;XM_032919044 XP_032774934;XP_032774935 ghrelin O-acyltransferase;membrane bound O-acyltransferase domain containing 4 protein-coding 625911275 Nek8 NIMA related kinase 8 INVOLVED IN animal organ morphogenesis (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); cystic kidney disease (ortholog); genetic disease (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) 9 92262374 92273475 + 22301074 116909044 MODEL JAAIVD010000002;XM_032912525;XM_032912526 XP_032768416;XP_032768417 serine/threonine-protein kinase Nek8 protein-coding 625911298 LOC116890037 60S ribosomal protein L19-like 1 202699766 202700344 + 116890037 MODEL JAAIVD010000025 pseudo 625911299 Map3k19 mitogen-activated protein kinase kinase kinase 19 10 7854308 7897185 + 22301074 116911242 MODEL JAAIVD010000005;XM_032915145 XP_032771036 protein-coding 625911317 LOC116913287 60S ribosomal protein L15-like 12 90297643 90298113 + 22301074;30032202 116913287 MODEL JAAIVD010000007;XM_032917413 XP_032773304 protein-coding 625911321 LOC116892132 uncharacterized LOC116892132 1 6446528 6448426 - 116892132 MODEL JAAIVD010000025;XR_004386915 ncrna 625911325 Nherf2 NHERF family PDZ scaffold protein 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of monoatomic ion transmembrane transport (ortholog); PARTICIPATES IN parathyroid hormone signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 1920530 1930703 - 30032202 116909632 MODEL JAAIVD010000002;XM_032913271;XM_032913273 XP_032769162;XP_032769164 Slc9a3r2 Na(+)/H(+) exchange regulatory cofactor NHE-RF2;SLC9A3 regulator 2 protein-coding 625911339 Cnbd2 cyclic nucleotide binding domain containing 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN spermatogenesis (ortholog); FOUND IN cytosol (ortholog) 5 135661652 135724633 + 30032202 116902203 MODEL JAAIVD010000023;XM_032904581 XP_032760472 cyclic nucleotide-binding domain-containing protein 2 protein-coding 625911357 LOC116889557 U2 spliceosomal RNA X 108620138 108620215 - 116889557 MODEL JAAIVD010000014 pseudo 625911358 LOC116884138 small nucleolar RNA SNORD113/SNORD114 family 14 74947911 74947994 - 116884138 MODEL JAAIVD010000009 pseudo 625911359 Qprt quinolinate phosphoribosyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); nicotinate-nucleotide diphosphorylase (carboxylating) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process (ortholog); quinolinate catabolic process (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; ASSOCIATED WITH Huntington's disease (ortholog); pellagra (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog) 2 74770714 74786299 + 22301074;30032202 116893899 MODEL JAAIVD010000001;XM_032895622 XP_032751513 nicotinate-nucleotide pyrophosphorylase [carboxylating] protein-coding 625911367 LOC116897948 olfactory receptor 5AC1-like 4 43096745 43097665 + 22301074;30032202 116897948 MODEL JAAIVD010000003;XM_032899347 XP_032755238 protein-coding 625911370 LOC116914575 translationally-controlled tumor protein-like 13 15194480 15195010 + 116914575 MODEL JAAIVD010000008 pseudo 625911371 LOC116904110 heterogeneous nuclear ribonucleoproteins A2/B1-like 6 135506763 135507842 + 22301074 116904110 MODEL JAAIVD010000024;XM_032906988 XP_032762879 protein-coding 625911376 Aqr aquarius intron-binding spliceosomal factor ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 92318661 92389413 - 22301074;30032202 116900953 MODEL JAAIVD010000023;XM_032902591 XP_032758482 RNA helicase aquarius protein-coding 625911415 Rtn2 reticulon 2 INVOLVED IN gene expression (ortholog); intracellular protein transmembrane transport (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 11 (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); intermediate filament (ortholog) 2 171324444 171336284 - 116892539 MODEL JAAIVD010000001;XM_032894300 XP_032750191 reticulon-2 protein-coding 625911429 Adgrg7 adhesion G protein-coupled receptor G7 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 4 40821027 40883054 - 22301074 116898906 MODEL JAAIVD010000003;XM_032900313 XP_032756204 adhesion G-protein coupled receptor G7 protein-coding 625911449 LOC116908329 U6 spliceosomal RNA 8 99237619 99237715 + 116908329 MODEL JAAIVD010000027 pseudo 625911450 LOC116911125 macrophage migration inhibitory factor-like 10 20649014 20649356 + 30032202 116911125 MODEL JAAIVD010000005;XM_032914972 XP_032770863 protein-coding 625911453 LOC116895750 ETS translocation variant 5-like 3 35868285 35869179 + 116895750 MODEL JAAIVD010000012 pseudo 625911454 Cenph centromere protein H ENCODES a protein that exhibits kinetochore binding (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN chromosome (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) 3 158139494 158152995 - 22301074;30032202 116897100 MODEL JAAIVD010000012;XM_032898743 XP_032754634 protein-coding 625911467 Exoc1l exocyst complex component 1 like 11 33224900 33245766 + 116912835 MODEL JAAIVD010000006;XM_032917023 XP_032772914 exocyst complex component 1-like protein-coding 625911473 Enpp6 ectonucleotide pyrophosphatase/phosphodiesterase 6 ENCODES a protein that exhibits glycerophosphocholine cholinephosphodiesterase activity (ortholog); glycerophosphodiester phosphodiesterase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN extracellular region (ortholog); plasma membrane (ortholog) 13 40921611 41025932 - 116914630 MODEL JAAIVD010000008;XM_032919021 XP_032774912 glycerophosphocholine cholinephosphodiesterase ENPP6 protein-coding 625911485 Crem cAMP responsive element modulator ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); fatty acid metabolic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Cardiomegaly (ortholog); Chloracne (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 14 29773638 29838928 - 22301074;30032202 116883296 MODEL JAAIVD010000009;XM_032884306;XM_032884307;XM_032884308;XM_032884309;XM_032884310;XM_032884312;XM_032884313;XM_032884314;XM_032884315;XM_032884316;XM_032884317;XM_032884318;XM_032884319;XM_032884320;XM_032884321;XM_032884322;XM_032884323;XM_032884324;XM_032884325;XM_032884326;XM_032884328;XM_032884329;XM_032884330;XM_032884331;XM_032884332;XM_032884333;XM_032884334;XM_032884335;XM_032884336;XM_032884337;XM_032884338;XM_032884339;XM_032884340;XM_032884341;XM_032884342;XM_032884344 XP_032740197;XP_032740198;XP_032740199;XP_032740200;XP_032740201;XP_032740203;XP_032740204;XP_032740205;XP_032740206;XP_032740207;XP_032740208;XP_032740209;XP_032740210;XP_032740211;XP_032740212;XP_032740213;XP_032740214;XP_032740215;XP_032740216;XP_032740217;XP_032740219;XP_032740220;XP_032740221;XP_032740222;XP_032740223;XP_032740224;XP_032740225;XP_032740226;XP_032740227;XP_032740228;XP_032740229;XP_032740230;XP_032740231;XP_032740232;XP_032740233;XP_032740235 cAMP-responsive element modulator protein-coding 625911601 LOC116891517 developmental pluripotency-associated protein 3-like 2 75246215 75247108 + 116891517 MODEL JAAIVD010000001 pseudo 625911602 LOC116900377 olfactory receptor 5L1-like 5 69540608 69541546 - 22301074;30032202 116900377 MODEL JAAIVD010000023;XM_032902126 XP_032758017 protein-coding 625911605 LOC116904677 small nucleolar RNA SNORA3/SNORA45 family 6 6612513 6612634 + 116904677 MODEL JAAIVD010000024;XR_004388374 snorna 625911608 LOC116890038 small nuclear ribonucleoprotein E-like 1 204347064 204351509 - 116890038 MODEL JAAIVD010000025 pseudo 625911609 Coq5 coenzyme Q5, methyltransferase ENCODES a protein that exhibits 2-methoxy-6-polyprenyl-1,4-benzoquinol methyltransferase activity (ortholog); INVOLVED IN methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog); primary coenzyme Q10 deficiency 9 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 16 38527049 38547376 - 22301074;30032202 116885545 MODEL JAAIVD010000004;XM_032886839 XP_032742730 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial protein-coding 625911620 LOC116898217 uncharacterized LOC116898217 4 146886798 146892101 - 116898217 MODEL JAAIVD010000003;XR_004387644 ncrna 625911624 LOC116906167 nucleoporin GLE1-like 7 101835186 101837958 + 116906167 MODEL JAAIVD010000026 pseudo 625911625 Il6 interleukin 6 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN bone remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); cell redox homeostasis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Hepatitis (ortholog); acute kidney failure (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); interleukin-6 receptor complex (ortholog) 6 158438075 158442699 + 22301074;30032202 116903029 MODEL JAAIVD010000024;XM_032905335 XP_032761226 interleukin-6 protein-coding 625911634 Slc25a13 solute carrier family 25 member 13 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); ATP biosynthetic process (ortholog); cellular respiration (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH adult-onset type II citrullinemia (ortholog); Bone Fractures (ortholog); citrullinemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 132418148 132599011 + 22301074;30032202 116904093 MODEL JAAIVD010000024;XM_032906962 XP_032762853 calcium-binding mitochondrial carrier protein Aralar2 protein-coding 625911656 LOC116906386 small nucleolar RNA SNORD113/SNORD114 family 7 127244522 127244595 + 116906386 MODEL JAAIVD010000026;XR_004388656 snorna 625911659 Cs citrate synthase ENCODES a protein that exhibits acyltransferase activity, acyl groups converted into alkyl on transfer (ortholog); citrate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); carbohydrate metabolic process (ortholog); citrate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH atrial fibrillation (ortholog); bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 155807855 155832734 + 22301074;30032202 116905995 MODEL JAAIVD010000025;XM_032909031 XP_032764922 citrate synthase, mitochondrial protein-coding 625911674 LOC116910428 uncharacterized LOC116910428 9 1007963 1008584 - 116910428 MODEL JAAIVD010000002;XR_004389151 ncrna 625911679 Slc39a5 solute carrier family 39 member 5 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cellular response to zinc ion starvation (ortholog); eye development (ortholog); ASSOCIATED WITH Myopia 24, Autosomal Dominant (ortholog); FOUND IN basolateral plasma membrane (ortholog) 1 155865924 155871235 - 22301074;30032202 116906057 MODEL JAAIVD010000025;XM_032909099 XP_032764990 zinc transporter ZIP5 protein-coding 625911695 LOC116883964 Ig kappa chain V-II region 26-10-like 14 25508362 25509121 - 116883964 MODEL JAAIVD010000009 pseudo 625911696 Ppil3 peptidylprolyl isomerase like 3 PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog) 4 133959637 133971938 + 22301074;30032202 116898518 MODEL JAAIVD010000003;XM_032899744 XP_032755635 peptidyl-prolyl cis-trans isomerase-like 3 protein-coding 625911705 Pycr2 pyrroline-5-carboxylate reductase 2 ENCODES a protein that exhibits pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); obsolete proline biosynthetic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 10 (ortholog); FOUND IN mitochondrion (ortholog) 10 59218103 59221867 + 22301074;30032202 116911500 MODEL JAAIVD010000005;XM_032915488 XP_032771379 protein-coding 625911716 LOC116897995 glyceraldehyde-3-phosphate dehydrogenase-like 4 56649008 56650007 + 116897995 MODEL JAAIVD010000003 pseudo 625911717 Slc6a14 solute carrier family 6 member 14 ENCODES a protein that exhibits (R)-carnitine transmembrane transporter activity (ortholog); alanine transmembrane transporter activity (ortholog); aromatic amino acid transmembrane transporter activity (ortholog); INVOLVED IN (R)-carnitine transmembrane transport (ortholog); alanine transport (ortholog); amino acid import across plasma membrane (ortholog); ASSOCIATED WITH Acidoses (ortholog); celiac disease (ortholog); Experimental Sarcoma (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog) X 100296974 100320585 + 22301074;30032202 116889128 MODEL JAAIVD010000014;XM_032890299 XP_032746190 sodium- and chloride-dependent neutral and basic amino acid transporter B(0+) protein-coding 625911735 LOC116883215 60S ribosomal protein L19-like 14 45962318 45983320 + 116883215 MODEL JAAIVD010000009 pseudo 625911736 Epx eosinophil peroxidase ENCODES a protein that exhibits peroxidase activity (ortholog); INVOLVED IN defense response to nematode (ortholog); eosinophil migration (ortholog); negative regulation of interleukin-10 production (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Eosinophilic Asthma (ortholog) 9 82922972 82932986 + 22301074;30032202 116909298 MODEL JAAIVD010000002;XM_032912839 XP_032768730 protein-coding 625911750 LOC116884249 protein RCC2-like 15 33549820 33551791 + 116884249 MODEL JAAIVD010000010 pseudo 625911751 Them4 thioesterase superfamily member 4 ENCODES a protein that exhibits long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 3 62841218 62860992 - 116896593 MODEL JAAIVD010000012;XM_032897834 XP_032753725 acyl-coenzyme A thioesterase THEM4 protein-coding 625911761 LOC116891836 NADH-cytochrome b5 reductase 2 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); FOUND IN membrane (ortholog) 2 105858507 105866926 - 22301074;30032202 116891836 MODEL JAAIVD010000001;XM_032893204;XM_032893205 XP_032749095;XP_032749096 protein-coding 625911777 LOC116888934 prostaglandin E2 receptor EP2 subtype-like X 429002 438232 + 116888934 MODEL JAAIVD010000014 pseudo 625911778 Phb2 prohibitin 2 ENCODES a protein that exhibits amide binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); B cell activation (ortholog); cell migration (ortholog); PARTICIPATES IN estrogen signaling pathway; mitochondria fusion pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cell surface (ortholog) 6 23167153 23171925 - 22301074;30032202 116903285 MODEL JAAIVD010000024;XM_032905708 XP_032761599 prohibitin-2 protein-coding 625911792 LOC116897495 small nucleolar RNA Z39 3 210651092 210651151 + 116897495 MODEL JAAIVD010000012;XR_004387516 snorna 625911795 Nqo1 NAD(P)H quinone dehydrogenase 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADH dehydrogenase (quinone) (non-electrogenic) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to metal ion (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; nuclear factor, erythroid 2 like 2 signaling pathway; oxidative stress response pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 17 27113177 27129220 - 2504488;30032202 116886434 MODEL JAAIVD010000011;X17464;XM_032887917 XP_032743808 NAD(P)H dehydrogenase [quinone] 1 protein-coding 625911805 Cabin1 calcineurin binding protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); nucleosome assembly (ortholog); response to activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Arthritis (ortholog); ovarian carcinoma (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 11681347 11802459 + 22301074;30032202 116886808 MODEL JAAIVD010000013;XM_032888234;XM_032888235;XM_032888236 XP_032744125;XP_032744126;XP_032744127 calcineurin-binding protein cabin-1 protein-coding 625911850 Cntnap2 contactin associated protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); PDZ domain binding (ortholog); protease binding (ortholog); INVOLVED IN action potential initiation (ortholog); adult behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH articulation disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); axon initial segment (ortholog) 6 93464514 95618764 - 116904389 MODEL JAAIVD010000024;XM_032907255 XP_032763146 contactin-associated protein-like 2 protein-coding 625911878 LOC116893223 olfactory receptor 14C36-like 2 114854435 114855430 + 22301074 116893223 MODEL JAAIVD010000001;XM_032895104 XP_032750995 protein-coding 625911881 LOC116908070 uncharacterized LOC116908070 8 64977228 64981067 - 116908070 MODEL JAAIVD010000027;XR_004388872 ncrna 625911886 Evl Enah/Vasp-like ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); cellular response to type II interferon (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); lamellipodium (ortholog) 7 126232611 126353336 + 30032202 116905451 MODEL JAAIVD010000026;XM_032908405;XM_032908406;XM_032908407 XP_032764296;XP_032764297;XP_032764298 ena/VASP-like protein protein-coding 625911909 Ifi30 IFI30 lysosomal thiol reductase ENCODES a protein that exhibits oxidoreductase activity, acting on a sulfur group of donors (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); allergic contact dermatitis (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); lysosome (ortholog) 13 13003673 13008154 - 22301074;30032202 116914810 MODEL JAAIVD010000008;XM_032919265 XP_032775156 gamma-interferon-inducible lysosomal thiol reductase protein-coding 625911920 LOC116897385 U6 spliceosomal RNA 3 64831510 64831616 - 116897385 MODEL JAAIVD010000012;XR_004387429 snrna 625911923 Col28a1 collagen type XXVIII alpha 1 chain ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN basement membrane (ortholog) 6 130217668 130367536 + 22301074 116904083 MODEL JAAIVD010000024;XM_032906950 XP_032762841 collagen alpha-1(XXVIII) chain protein-coding 625911962 LOC116913928 uncharacterized LOC116913928 12 33454390 33458665 - 116913928 MODEL JAAIVD010000007;XM_032918195 XP_032774086 uncharacterized protein LOC116913928 protein-coding 625911969 Kcnip2 potassium voltage-gated channel interacting protein 2 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN action potential (ortholog); clustering of voltage-gated potassium channels (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); Kv4.2-KChIP2 channel complex (ortholog) 2 45267753 45290482 - 22301074;30032202 116891232 MODEL JAAIVD010000001;XM_032892082;XM_032892083;XM_032892084;XM_032892085 XP_032747973;XP_032747974;XP_032747975;XP_032747976 Kv channel-interacting protein 2 protein-coding 625911991 Otulin OTU deubiquitinase with linear linkage specificity ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH autosomal dominant autoinflammation, panniculitis, and dermatosis syndrome (ortholog); autosomal recessive autoinflammation, panniculitis, and dermatosis syndrome (ortholog); immunodeficiency 107 (ortholog); FOUND IN cytoplasm (ortholog); LUBAC complex (ortholog) 3 153216483 153241497 + 22301074 116897060 MODEL JAAIVD010000012;XM_032898683;XM_032898684;XM_032898685 XP_032754574;XP_032754575;XP_032754576 ubiquitin thioesterase otulin protein-coding 625912010 LOC116886739 small nucleolar RNA SNORA17 17 9965212 9965340 - 116886739 MODEL JAAIVD010000011;XR_004386147 snorna 625912013 Bbs9 Bardet-Biedl syndrome 9 INVOLVED IN cilium assembly (ortholog); fat cell differentiation (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 9 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 8 18698588 19103712 + 30032202 116906698 MODEL JAAIVD010000027;XM_032909494 XP_032765385 protein PTHB1 protein-coding 625912041 LOC116888422 protein phosphatase inhibitor 2 family member C-like X 7916683 7917231 - 22301074;30032202 116888422 MODEL JAAIVD010000014;XM_032889691 XP_032745582 protein-coding 625912044 Ptprz1 protein tyrosine phosphatase receptor type Z1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); integrin binding (ortholog); phosphatase activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine (ortholog) 6 116161663 116343087 - 22301074;30032202 116904043 MODEL JAAIVD010000024;XM_032906900 XP_032762791 receptor-type tyrosine-protein phosphatase zeta protein-coding 625912078 LOC116899983 60S ribosomal protein L34-like 5 136521376 136521995 - 116899983 MODEL JAAIVD010000023 pseudo 625912079 LOC116913319 protein S100-A10-like 12 6965909 6966247 + 116913319 MODEL JAAIVD010000007 pseudo 625912080 LOC116911495 olfactory receptor 10J3-like 10 52250379 52251320 + 22301074 116911495 MODEL JAAIVD010000005;XM_032915479 XP_032771370 protein-coding 625912083 Actg1 actin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); profilin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to type II interferon (ortholog); morphogenesis of a polarized epithelium (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 20 (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical junction complex (ortholog) 9 63672093 63674984 + 2402472 116908743 MODEL JAAIVD010000002;X52815;XM_032912092 CAA36999;XP_032767983 actin, cytoplasmic 2 protein-coding 625912093 LOC116894111 uncharacterized protein RAB5IF homolog 1 20182415 20183280 - 116894111 MODEL JAAIVD010000025 pseudo 625912094 LOC116912964 small nucleolar RNA SNORA18 11 3996269 3996399 + 116912964 MODEL JAAIVD010000006;XR_004389531 snorna 625912097 LOC116906886 cytochrome P450 4F5 1 157047990 157064287 + 22301074 116906886 MODEL JAAIVD010000025;XM_032909803 XP_032765694 protein-coding 625912113 LOC116905796 translationally-controlled tumor protein-like 7 9535335 9536953 - 116905796 MODEL JAAIVD010000026 pseudo 625912114 LOC116900825 40S ribosomal protein S7-like 5 44614999 44615526 + 116900825 MODEL JAAIVD010000023 pseudo 625912115 LOC116908388 small nucleolar RNA SNORA48 8 70429503 70429647 + 116908388 MODEL JAAIVD010000027;XR_004388933 snorna 625912118 LOC116902667 U6 spliceosomal RNA 5 64300914 64301020 - 116902667 MODEL JAAIVD010000023;XR_004388229 snrna 625912121 LOC116902479 U6 spliceosomal RNA 5 34989341 34989437 - 116902479 MODEL JAAIVD010000023 pseudo 625912122 Fam186b family with sequence similarity 186 member B ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN protein-containing complex (ortholog) 1 272075882 272091371 - 116885011 MODEL JAAIVD010000025;XM_032886254 XP_032742145 protein FAM186B protein-coding 625912134 LOC116895946 60S ribosomal protein L30-like 3 135774523 135774864 + 22301074;30032202 116895946 MODEL JAAIVD010000012;XM_032897006 XP_032752897 protein-coding 625912137 Slc25a23 solute carrier family 25 member 23 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ADP:phosphate antiporter activity (ortholog); ATP:phosphate antiporter activity (ortholog); INVOLVED IN adenine nucleotide transport (ortholog); calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); FOUND IN mitochondrion (ortholog) 4 88422475 88438543 - 22301074;30032202 116899209 MODEL JAAIVD010000003;XM_032900800;XM_032900801 XP_032756691;XP_032756692 calcium-binding mitochondrial carrier protein SCaMC-3 protein-coding 625912154 Hoxd12 homeobox D12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic digit morphogenesis (ortholog); pattern specification process (ortholog); skeletal system development (ortholog); ASSOCIATED WITH clubfoot (ortholog); Congenital Limb Deformities (ortholog); melanoma (ortholog); FOUND IN transcription regulator complex (ortholog) 5 52016460 52017582 + 22301074;30032202 116900208 MODEL JAAIVD010000023;XM_032901963 XP_032757854 homeobox protein Hox-D12 protein-coding 625912160 LOC116892852 uncharacterized LOC116892852 2 192682855 192709870 - 116892852 MODEL JAAIVD010000001;XR_004386978 ncrna 625912164 LOC116894294 mortality factor 4-like protein 1 2 137477535 137478496 + 116894294 MODEL JAAIVD010000001 pseudo 625912165 Ryr1 ryanodine receptor 1 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-induced calcium release activity (ortholog); enzyme binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to ATP (ortholog); cellular response to caffeine (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 7 (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 166870656 166999047 + 22301074;30032202 116892364 MODEL JAAIVD010000001;XM_032894022 XP_032749913 protein-coding 625912274 Rabep1 rabaptin, RAB GTPase binding effector protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); protein localization to ciliary membrane (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH teratoma (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); endosome (ortholog) 9 50466718 50569706 + 22301074;30032202 116909023 MODEL JAAIVD010000002;XM_032912499;XM_032912500;XM_032912501;XM_032912502 XP_032768390;XP_032768391;XP_032768392;XP_032768393 rab GTPase-binding effector protein 1 protein-coding 625912303 LOC116902506 small nucleolar RNA SNORD36 5 9742305 9742378 - 116902506 MODEL JAAIVD010000023;XR_004388116 snorna 625912306 LOC116883724 constitutive coactivator of PPAR-gamma-like protein 1 14 67865101 67953915 - 30032202 116883724 MODEL JAAIVD010000009;XM_032884954 XP_032740845 protein-coding 625912328 LOC116900916 actin-related protein 2/3 complex subunit 5-like 5 78786637 78787067 + 116900916 MODEL JAAIVD010000023 pseudo 625912329 LOC116893510 actin, alpha skeletal muscle-like 2 188290919 188295075 + 116893510 MODEL JAAIVD010000001;XM_032895245 XP_032751136 protein-coding 625912333 Slc17a9 solute carrier family 17 member 9 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); guanine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP export (ortholog); ATP transport (ortholog); ASSOCIATED WITH porokeratosis (ortholog); Porokeratosis, Disseminated Superficial Actinic, 8 (ortholog); FOUND IN chromaffin granule membrane (ortholog); lysosomal membrane (ortholog); mucin granule (ortholog) 5 157825346 157841673 + 22301074 116902421 MODEL JAAIVD010000023;XM_032904950;XM_032904951;XM_032904952 XP_032760841;XP_032760842;XP_032760843 protein-coding 625912356 LOC116912960 small nucleolar RNA SNORA19 11 94882205 94882330 - 116912960 MODEL JAAIVD010000006;XR_004389527 snorna 625912359 LOC116907814 uncharacterized LOC116907814 8 39413326 39414347 + 116907814 MODEL JAAIVD010000027;XR_004388848 ncrna 625912364 Nlrp5 NLR family pyrin domain containing 5 ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); tubulin binding (ortholog); INVOLVED IN actin filament organization (ortholog); animal organ morphogenesis (ortholog); cortical granule exocytosis (ortholog); ASSOCIATED WITH Embryo Loss (ortholog); oculoectodermal syndrome (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 19 (ortholog); FOUND IN apical cortex (ortholog); cell cortex (ortholog); cortical granule (ortholog) 2 180006023 180030396 - 22301074;30032202 116894575 MODEL JAAIVD010000001;XM_032896294 XP_032752185 NACHT, LRR and PYD domains-containing protein 5 protein-coding 625912374 LOC116904576 60S ribosomal protein L26-like 6 20473144 20473572 + 116904576 MODEL JAAIVD010000024 pseudo 625912375 LOC116894892 U6 spliceosomal RNA 2 80778228 80778330 + 116894892 MODEL JAAIVD010000001;XR_004387098 snrna 625912378 Znf574 zinc finger protein 574 ASSOCIATED WITH COVID-19 (ortholog) 2 169624144 169630041 - 30032202 116892471 MODEL JAAIVD010000001;XM_032894195;XM_032894196 XP_032750086;XP_032750087 protein-coding 625912387 Pacsin3 protein kinase C and casein kinase substrate in neurons 3 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of calcium ion transport (ortholog); negative regulation of endocytosis (ortholog); plasma membrane tubulation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 65418440 65426351 + 22301074;30032202 116901617 MODEL JAAIVD010000023;XM_032903663;XM_032903664 XP_032759554;XP_032759555 protein kinase C and casein kinase substrate in neurons protein 3 protein-coding 625912404 LOC116898307 eukaryotic initiation factor 4A-I-like 4 32635292 32635942 + 116898307 MODEL JAAIVD010000003 pseudo 625912405 LOC116892763 olfactory receptor 1030-like 2 182701514 182702449 - 22301074;30032202 116892763 MODEL JAAIVD010000001;XM_032894642 XP_032750533 protein-coding 625912408 Mex3c mex-3 RNA binding family member C ENCODES a protein that exhibits RNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN chondrocyte hypertrophy (ortholog); energy homeostasis (ortholog); regulation of fat cell differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); juvenile rheumatoid arthritis (ortholog) 15 58484676 58510450 - 22301074;30032202 116884394 MODEL JAAIVD010000010;XM_032885501 XP_032741392 RNA-binding E3 ubiquitin-protein ligase MEX3C protein-coding 625912416 Cbr4 carbonyl reductase 4 ENCODES a protein that exhibits 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); NAD(P)H dehydrogenase (quinone) activity (ortholog); NADPH binding (ortholog); INVOLVED IN daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); fatty acid biosynthetic process (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); pancreatic cancer (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxidoreductase complex (ortholog) 13 27541551 27557239 - 30032202 116914723 MODEL JAAIVD010000008;XM_032919153 XP_032775044 carbonyl reductase family member 4 protein-coding 625912425 LOC116910589 uncharacterized LOC116910589 9 82744284 82759322 - 116910589 MODEL JAAIVD010000002;XR_004389161;XR_004389162;XR_004389163 ncrna 625912435 LOC116906873 olfactory receptor 145-like 8 32258992 32259924 + 22301074;30032202 116906873 MODEL JAAIVD010000027;XM_032909785 XP_032765676 protein-coding 625912438 LOC116900819 60S ribosomal protein L9-like 5 39552869 39562793 - 116900819 MODEL JAAIVD010000023 pseudo 625912439 LOC116897734 60S ribosomal protein L10a-like 4 100971336 100975434 - 116897734 MODEL JAAIVD010000003 pseudo 625912440 Aadacl3 arylacetamide deacetylase like 3 1 14360930 14368971 + 22301074 116886256 MODEL JAAIVD010000025;XM_032887680 XP_032743571 arylacetamide deacetylase-like 3 protein-coding 625912446 LOC116912769 eukaryotic translation initiation factor 6-like 11 75644824 75645595 - 116912769 MODEL JAAIVD010000006 pseudo 625912447 LOC116904187 macrophage migration inhibitory factor-like 6 152356715 152357755 + 30032202 116904187 MODEL JAAIVD010000024;XM_032907097 XP_032762988 protein-coding 625912451 LOC116891111 60S ribosomal protein L36a-like 2 34295258 34295643 - 116891111 MODEL JAAIVD010000001 pseudo 625912452 Rbm48 RNA binding motif protein 48 ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN nucleoplasm (ortholog) 6 135860825 135872471 - 22301074;30032202 116904114 MODEL JAAIVD010000024;XM_032906994;XM_032906995 XP_032762885;XP_032762886 RNA-binding protein 48 protein-coding 625912464 LOC116893985 olfactory receptor 52B6 2 101454569 101455892 - 22301074 116893985 MODEL JAAIVD010000001;XM_032895700 XP_032751591 protein-coding 625912468 LOC116908234 transcriptional adapter 3-like 8 83450575 83451898 - 116908234 MODEL JAAIVD010000027 pseudo 625912469 Xpnpep2 X-prolyl aminopeptidase 2 PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); angioedema (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular exosome (ortholog) X 110272077 110298450 - 22301074 116889187 MODEL JAAIVD010000014;XM_032890348 XP_032746239 xaa-Pro aminopeptidase 2 protein-coding 625912494 Ky kyphoscoliosis peptidase INVOLVED IN muscle organ development (ortholog); neuromuscular junction development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); myofibrillar myopathy (ortholog); myofibrillar myopathy 7 (ortholog); FOUND IN Z disc (ortholog) 8 93806512 93845344 + 116907970 MODEL JAAIVD010000027;XM_032911198;XM_032911199;XM_032911200;XM_032911201 XP_032767089;XP_032767090;XP_032767091;XP_032767092 protein-coding 625912519 Nipal2 NIPA like domain containing 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 208256305 208348612 - 22301074;30032202 116884204 MODEL JAAIVD010000025;XM_032885334 XP_032741225 NIPA-like protein 2 protein-coding 625912533 Pip4p1 phosphatidylinositol-4,5-bisphosphate 4-phosphatase 1 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate 4-phosphatase activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); lysosome localization (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); phagocytic vesicle membrane (ortholog) 12 72384716 72388327 + 22301074;30032202 116913379 MODEL JAAIVD010000007;XM_032917550;XM_032917551;XM_032917552;XM_032917553 XP_032773441;XP_032773442;XP_032773443;XP_032773444 type 1 phosphatidylinositol 4,5-bisphosphate 4-phosphatase protein-coding 625912552 Abca12 ATP binding cassette subfamily A member 12 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); lipid transporter activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); ceramide transport (ortholog); corneocyte desquamation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 4A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); epidermal lamellar body (ortholog) 4 144799599 144969438 - 22301074;30032202 116899475 MODEL JAAIVD010000003;XM_032901300 XP_032757191 ATP-binding cassette sub-family A member 12 protein-coding 625912609 LOC116912927 U6 spliceosomal RNA 11 20110794 20110901 + 116912927 MODEL JAAIVD010000006;XR_004389498 snrna 625912612 LOC116892077 uncharacterized LOC116892077 2 151214849 151217380 - 116892077 MODEL JAAIVD010000001;XR_004386908 ncrna 625912616 LOC116906390 small nucleolar RNA SNORD113/SNORD114 family 7 127201020 127201093 + 116906390 MODEL JAAIVD010000026;XR_004388660 snorna 625912619 Ifnar2 interferon alpha and beta receptor subunit 2 ENCODES a protein that exhibits cytokine binding (ortholog); protein kinase binding (ortholog); type I interferon binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-beta (ortholog); defense response to virus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatitis B (ortholog); immunodeficiency 45 (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 4 53201836 53221781 - 22301074;30032202 116898996 MODEL JAAIVD010000003;XM_032900442 XP_032756333 interferon alpha/beta receptor 2 protein-coding 625912632 LOC116888589 rho GTPase-activating protein 6-like X 28750700 28814862 + 116888589 MODEL JAAIVD010000014 pseudo 625912633 LOC116895053 small nucleolar RNA SNORA17 2 38065897 38066022 + 116895053 MODEL JAAIVD010000001;XR_004387235 snorna 625912636 Dennd1c DENN domain containing 1C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 88444308 88457031 - 30032202 116899212 MODEL JAAIVD010000003;XM_032900806 XP_032756697 DENN domain-containing protein 1C protein-coding 625912664 LOC116905405 WD repeat-containing protein 60-like 7 119819649 119848959 + 30032202 116905405 MODEL JAAIVD010000026;XM_032908363;XM_032908365;XM_032908366;XM_032908367;XM_032908368 XP_032764254;XP_032764256;XP_032764257;XP_032764258;XP_032764259 protein-coding 625912688 LOC116912269 alpha-fetoprotein-like 11 3991887 4033200 + 22301074;30032202 116912269 MODEL JAAIVD010000006;XM_032916257 XP_032772148 protein-coding 625912706 Pth2r parathyroid hormone 2 receptor ENCODES a protein that exhibits parathyroid hormone receptor activity (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH syndromic intellectual disability (ortholog) 4 139198948 139297161 + 22301074;30032202 116899464 MODEL JAAIVD010000003;XM_032901262 XP_032757153 protein-coding 625912723 Kdm2a lysine demethylase 2A ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); double-strand break repair via nonhomologous end joining (ortholog); heart looping (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); congestive heart failure (ortholog); Familial Prostate Cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 2 3259066 3328896 + 22301074;30032202 116894781 MODEL JAAIVD010000001;XM_032896433 XP_032752324 lysine-specific demethylase 2A protein-coding 625912749 Otud6a OTU deubiquitinase 6A ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein K11-linked deubiquitination (ortholog); protein K27-linked deubiquitination (ortholog); protein K29-linked deubiquitination (ortholog) X 58182483 58183355 + 30032202 116888576 MODEL JAAIVD010000014;XM_032889877 XP_032745768 OTU domain-containing protein 6A protein-coding 625912752 LOC116895929 glutathione peroxidase 2-like 3 124974400 124974975 + 116895929 MODEL JAAIVD010000012 pseudo 625912753 Crppa CDP-L-ribitol pyrophosphorylase A ENCODES a protein that exhibits cytidylyltransferase activity (ortholog); D-ribitol-5-phosphate cytidylyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); protein glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2U (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy due to integrin alpha-7 deficiency (ortholog); FOUND IN cytosol (ortholog) 7 49925492 50182940 - 22301074;30032202 116904979 MODEL JAAIVD010000026;XM_032907659 XP_032763550 D-ribitol-5-phosphate cytidylyltransferase protein-coding 625912767 LOC116894584 T-complex protein 1 subunit zeta-like 2 180397918 180399586 - 116894584 MODEL JAAIVD010000001 pseudo 625912768 Myo5c myosin VC ASSOCIATED WITH substance-related disorder (ortholog) 8 69521287 69598611 + 22301074;30032202 116906837 MODEL JAAIVD010000027;XM_032909725 XP_032765616 unconventional myosin-Vc protein-coding 625912813 Ophn1 oligophrenin 1 ENCODES a protein that exhibits actin binding (ortholog); GTPase activator activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell junction assembly (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Billuart-type X-linked syndromic intellectual developmental disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); dendrite (ortholog) X 56552350 56808944 + 22301074;30032202 116887802 MODEL JAAIVD010000014;XM_032889327;XM_032889328 XP_032745218;XP_032745219 oligophrenin-1 protein-coding 625912838 Chmp7 charged multivesicular body protein 7 INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) 12 54601156 54616448 + 30032202 116914075 MODEL JAAIVD010000007;XM_032918382 XP_032774273 protein-coding 625912852 LOC116889808 30S ribosomal protein S10-like 22301074;30032202 116889808 MODEL JAAIVD010000764;XM_032890655 XP_032746546 protein-coding 625912853 LOC116887222 butyrophilin-like protein 1 18 7078858 7088235 + 30032202 116887222 MODEL JAAIVD010000013;XM_032888783;XM_032888784;XM_032888785 XP_032744674;XP_032744675;XP_032744676 protein-coding 625912877 LOC116897165 histone H2A.Z-like 1 87407893 87408215 - 116897165 MODEL JAAIVD010000025 pseudo 625912878 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889664 MODEL JAAIVD010000045 trna 625912879 Gsc2 goosecoid homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 4 3178101 3180087 - 22301074;30032202 116897779 MODEL JAAIVD010000003;XM_032899205 XP_032755096 homeobox protein goosecoid-2 protein-coding 625912885 Ptafr platelet activating factor receptor ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular response to 2-O-acetyl-1-O-hexadecyl-sn-glycero-3-phosphocholine (ortholog); cellular response to cAMP (ortholog); cellular response to fatty acid (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog) 1 25656122 25681512 - 22301074;30032202 116895438 MODEL JAAIVD010000025;XM_032896718;XM_032896724 XP_032752609;XP_032752615 platelet-activating factor receptor protein-coding 625912894 Fam13a family with sequence similarity 13 member A ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); idiopathic pulmonary fibrosis (ortholog) 6 82912226 82969162 + 116904363 MODEL JAAIVD010000024;XM_032907245 XP_032763136 protein FAM13A protein-coding 625912914 Slc3a2 solute carrier family 3 member 2 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); double-stranded RNA binding (ortholog); exogenous protein binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); isoleucine transport (ortholog); L-alanine import across plasma membrane (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); Liver Metastasis (ortholog); FOUND IN amino acid transport complex (ortholog); apical plasma membrane (ortholog); apical pole of neuron (ortholog) 2 9217890 9232052 + 22301074;30032202 116890938 MODEL JAAIVD010000001;XM_032891580 XP_032747471 4F2 cell-surface antigen heavy chain protein-coding 625912928 Stard6 StAR related lipid transfer domain containing 6 15 60775361 60792381 - 22301074;30032202 116884395 MODEL JAAIVD010000010;XM_032885503 XP_032741394 stAR-related lipid transfer protein 6 protein-coding 625912940 LOC116905566 geranylgeranyl transferase type-2 subunit beta-like 7 87464324 87469519 + 116905566 MODEL JAAIVD010000026 pseudo 625912941 LOC116911403 uncharacterized LOC116911403 10 2078754 2097213 - 116911403 MODEL JAAIVD010000005 pseudo 625912942 Sgpl1 sphingosine-1-phosphate lyase 1 ENCODES a protein that exhibits sphinganine-1-phosphate aldolase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); apoptotic signaling pathway (ortholog); ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH genetic disease (ortholog); nephrotic syndrome (ortholog); nephrotic syndrome type 14 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 18 26934031 26980027 - 22301074;30032202 116886810 MODEL JAAIVD010000013;XM_032888237;XM_032888238;XM_032888239 XP_032744128;XP_032744129;XP_032744130 protein-coding 625912966 Mcc MCC regulator of WNT signaling pathway INVOLVED IN establishment of protein localization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of epithelial cell migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); colon carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 229762556 229802275 + 22301074 116893046 MODEL JAAIVD010000001;XM_032895014 XP_032750905 colorectal mutant cancer protein protein-coding 625912972 Rgs1 regulator of G protein signaling 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukotriene signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); COVID-19 (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 10 24151464 24155812 - 116911682 MODEL JAAIVD010000005;XM_032915635 XP_032771526 regulator of G-protein signaling 1 protein-coding 625912981 Arhgef2 Rho/Rac guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); asymmetric neuroblast division (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN Reelin signaling pathway; ASSOCIATED WITH microcephaly (ortholog); myoepithelioma (ortholog); neurodevelopmental disorder with midbrain and hindbrain malformations (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendritic shaft (ortholog) 3 64902011 64945270 - 22301074;30032202 116896678 MODEL JAAIVD010000012;XM_032898052;XM_032898053;XM_032898054;XM_032898055;XM_032898056;XM_032898057;XM_032898058;XM_032898059 XP_032753943;XP_032753944;XP_032753945;XP_032753946;XP_032753947;XP_032753948;XP_032753949;XP_032753950 rho guanine nucleotide exchange factor 2 protein-coding 625913031 Col24a1 collagen type XXIV alpha 1 chain INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog) 3 15325482 15581002 - 22301074 116896182 MODEL JAAIVD010000012;XM_032897221 XP_032753112 collagen alpha-1(XXIV) chain protein-coding 625913095 Rnft1 ring finger protein, transmembrane 1 ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of ERAD pathway (ortholog); protein autoubiquitination (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 84275585 84286686 - 30032202 116909185 MODEL JAAIVD010000002;XM_032912676 XP_032768567 E3 ubiquitin-protein ligase RNFT1 protein-coding 625913108 LOC116894848 U6 spliceosomal RNA 2 28887840 28887946 - 116894848 MODEL JAAIVD010000001;XR_004387063 snrna 625913111 Hoxc4 homeobox C4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); cellular response to glial cell derived neurotrophic factor (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); FOUND IN nucleoplasm (ortholog) 1 260046588 260049121 - 22301074;30032202 116883297 MODEL JAAIVD010000025;XM_032884311 XP_032740202 homeobox protein Hox-C4 protein-coding 625913117 Triml2 tripartite motif family like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to retinoic acid (ortholog) 13 44597328 44607949 + 22301074 116914868 MODEL JAAIVD010000008;XM_032919314 XP_032775205 probable E3 ubiquitin-protein ligase TRIML2 protein-coding 625913126 Pdlim3 PDZ and LIM domain 3 ENCODES a protein that exhibits actinin binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN actin filament organization (ortholog); heart development (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); Z disc (ortholog) 13 41971215 42002477 - 30032202 116914799 MODEL JAAIVD010000008;XM_032919249;XM_032919250 XP_032775140;XP_032775141 PDZ and LIM domain protein 3 protein-coding 625913140 Atp1b2 ATPase Na+/K+ transporting subunit beta 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte end-foot (ortholog); astrocyte projection (ortholog) 9 49208873 49215290 - 22301074;30032202 116909577 MODEL JAAIVD010000002;XM_032913197 XP_032769088 sodium/potassium-transporting ATPase subunit beta-2 protein-coding 625913151 Kcnc1 potassium voltage-gated channel subfamily C member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); cerebellum development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axolemma (ortholog); calyx of Held (ortholog); cell surface (ortholog) 2 152934126 153100996 - 1378392;22301074;30032202 116892105 MODEL JAAIVD010000001;X62840;XM_032893582;XR_004386912 CAA44644;XP_032749473 voltage-gated potassium channel protein-coding 625913163 Stx5 syntaxin 5 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi disassembly (ortholog); ASSOCIATED WITH Congenital Disorder of Glycosylation Type IIaa (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); SNARE complex (ortholog) 2 9187538 9202838 - 22301074;30032202 116890931 MODEL JAAIVD010000001;XM_032891574;XM_032891575 XP_032747465;XP_032747466 syntaxin-5 protein-coding 625913181 LOC116908043 zinc finger protein 120-like 8 115252500 115263047 + 22301074 116908043 MODEL JAAIVD010000027;XM_032911317 XP_032767208 protein-coding 625913188 LOC116885736 NXPE family member 3-like 16 16054136 16069875 - 116885736 MODEL JAAIVD010000004;XM_032887046 XP_032742937 protein-coding 625913197 Fnbp4 formin binding protein 4 FOUND IN nucleoplasm (ortholog) 5 64925342 64954209 + 22301074 116901597 MODEL JAAIVD010000023;XM_032903623 XP_032759514 formin-binding protein 4 protein-coding 625913218 LOC116908929 keratin-associated protein 2-1-like 9 54454814 54455212 - 116908929 MODEL JAAIVD010000002 pseudo 625913219 LOC116908741 uncharacterized LOC116908741 9 32450424 32452199 + 116908741 MODEL JAAIVD010000002;XR_004389017 ncrna 625913224 LOC116893570 histocompatibility antigen 60b-like 2 221874882 222066470 - 30032202 116893570 MODEL JAAIVD010000001;XM_032895277 XP_032751168 protein-coding 625913231 LOC116897499 small nucleolar RNA SNORA15 3 194420783 194420912 + 116897499 MODEL JAAIVD010000012;XR_004387520 snorna 625913234 Fis1 fission, mitochondrial 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to lipid (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); chronic kidney disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) 16 17053579 17068682 - 22301074;30032202 116885319 MODEL JAAIVD010000004;XM_032886581;XM_032886582;XM_032886583;XM_032886584 XP_032742472;XP_032742473;XP_032742474;XP_032742475 mitochondrial fission 1 protein protein-coding 625913254 Map3k12 mitogen-activated protein kinase kinase kinase 12 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of motor neuron apoptotic process (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FOUND IN axon (ortholog); cytosol (ortholog); growth cone (ortholog) 1 260565470 260584247 + 22301074;30032202 116883361 MODEL JAAIVD010000025;XM_032884443;XM_032884453;XM_032884464;XM_032884475;XM_032884484 XP_032740334;XP_032740344;XP_032740355;XP_032740366;XP_032740375 protein-coding 625913284 LOC116913884 26S proteasome non-ATPase regulatory subunit 8-like 12 17406258 17407885 - 116913884 MODEL JAAIVD010000007 pseudo 625913285 LOC116908436 U1 spliceosomal RNA 8 36376267 36376418 - 116908436 MODEL JAAIVD010000027 pseudo 625913286 LOC116893423 zinc finger and SCAN domain containing protein 4D-like 2 175065026 175068887 - 30032202 116893423 MODEL JAAIVD010000001;XM_032895201 XP_032751092 protein-coding 625913292 LOC116907182 elongation factor 1-alpha 1-like 8 1342670 1347104 - 116907182 MODEL JAAIVD010000027 pseudo 625913293 LOC116887950 heterogeneous nuclear ribonucleoprotein A1-like X 63686932 63687711 - 116887950 MODEL JAAIVD010000014 pseudo 625913294 Bag3 BAG cochaperone 3 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); protein-containing complex binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to heat (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); atrial fibrillation (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 73395151 73419277 - 22301074;30032202 116891432 MODEL JAAIVD010000001;XM_032892487 XP_032748378 BAG family molecular chaperone regulator 3 protein-coding 625913302 LOC116892688 zinc finger protein 580 2 177630115 177632286 + 30032202 116892688 MODEL JAAIVD010000001;XM_032894544 XP_032750435 protein-coding 625913308 LOC116887485 H-2 class I histocompatibility antigen, D-37 alpha chain-like 18 9223888 9260418 - 30032202 116887485 MODEL JAAIVD010000013;XM_032889106;XM_032889107;XM_032889108;XM_032889109 XP_032744997;XP_032744998;XP_032744999;XP_032745000 protein-coding 625913329 Rad9b RAD9 checkpoint clamp component B ASSOCIATED WITH neural tube defect (ortholog); FOUND IN nucleus (ortholog) 16 31494904 31524365 + 22301074;30032202 116885809 MODEL JAAIVD010000004;XM_032887142 XP_032743033 cell cycle checkpoint control protein RAD9B protein-coding 625913344 Dennd3 DENN domain containing 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog) 1 246270696 246329489 + 22301074;30032202 116912442 MODEL JAAIVD010000025;XM_032916514 XP_032772405 DENN domain-containing protein 3 protein-coding 625913371 Tgif2 TGFB induced factor homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nodal signaling pathway (ortholog); positive regulation of amacrine cell differentiation (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog) 5 136172919 136184141 + 30032202 116902210 MODEL JAAIVD010000023;XM_032904607;XM_032904609 XP_032760498;XP_032760500 homeobox protein TGIF2 protein-coding 625913380 Ccl17 C-C motif chemokine ligand 17 ENCODES a protein that exhibits CCR4 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of myoblast differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic bronchopulmonary aspergillosis (ortholog); allergic contact dermatitis (ortholog); allergic disease (ortholog) 17 1686327 1696183 + 22301074;30032202 116886437 MODEL JAAIVD010000011;XM_032887923 XP_032743814 C-C motif chemokine 17 protein-coding 625913388 LOC116906511 small nucleolar RNA U3 7 50357114 50357196 + 116906511 MODEL JAAIVD010000026 pseudo 625913389 LOC116893624 interferon-induced transmembrane protein 1-like 2 8509304 8510603 - 30032202 116893624 MODEL JAAIVD010000001;XM_032895337 XP_032751228 protein-coding 625913395 LOC116897622 small nucleolar RNA SNORD71 3 60059993 60060072 - 116897622 MODEL JAAIVD010000012;XR_004387603 snorna 625913398 Nxf1 nuclear RNA export factor 1 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); poly(A)+ mRNA export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nuclear inclusion body (ortholog); nuclear pore (ortholog) 2 9172750 9185752 - 22301074;30032202 116890928 MODEL JAAIVD010000001;XM_032891571 XP_032747462 protein-coding 625913423 LOC116901054 60S ribosomal protein L34-like 5 136910772 137058806 + 116901054 MODEL JAAIVD010000023 pseudo 625913424 LOC116908354 small nucleolar RNA SNORA16B/SNORA16A family 8 2722580 2722712 + 116908354 MODEL JAAIVD010000027;XR_004388904 snorna 625913427 Phyh phytanoyl-CoA 2-hydroxylase ENCODES a protein that exhibits carboxylic acid binding (ortholog); catalytic activity (ortholog); ferrous iron binding (ortholog); INVOLVED IN 2-oxobutyrate catabolic process (ortholog); 2-oxoglutarate metabolic process (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH Adult Refsum Disease, 1 (ortholog); Familial Hypophosphatemic Rickets (ortholog); fundus dystrophy (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); peroxisome (ortholog) 14 11282374 11300737 + 30032202 116883392 MODEL JAAIVD010000009;XM_032884515 XP_032740406 phytanoyl-CoA dioxygenase, peroxisomal protein-coding 625913440 LOC116908171 60S ribosomal protein L37a-like 8 48332175 48332479 - 116908171 MODEL JAAIVD010000027 pseudo 625913441 Zxdc ZXD family zinc finger C ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); LRR domain binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog) 6 56509837 56540754 - 30032202 116903510 MODEL JAAIVD010000024;XM_032906115 XP_032762006 zinc finger protein ZXDC protein-coding 625913455 LOC116886992 cytochrome c, somatic-like 18 49678584 49678943 - 22301074;30032202 116886992 MODEL JAAIVD010000013;XM_032888471 XP_032744362 protein-coding 625913458 Ankrd40cl ANKRD40 C-terminal like 9 51248907 51253561 - 116910130 MODEL JAAIVD010000002;XM_032913965 XP_032769856 putative ANKRD40 C-terminal-like protein protein-coding 625913466 LOC116912983 small nucleolar RNA SNORA17 11 35343751 35343880 + 116912983 MODEL JAAIVD010000006;XR_004389547 snorna 625913469 LOC116891245 uncharacterized LOC116891245 2 45762867 45765428 - 116891245 MODEL JAAIVD010000001;XR_004386823 ncrna 625913473 LOC116888956 gamma-glutamylaminecyclotransferase-like 1 110075434 110076066 - 30032202 116888956 MODEL JAAIVD010000025;XM_032890186 XP_032746077 protein-coding 625913477 LOC116900705 40S ribosomal protein S12-like 5 132168332 132168838 + 22301074;30032202 116900705 MODEL JAAIVD010000023;XM_032902408 XP_032758299 protein-coding 625913482 LOC116907161 olfactory receptor 145-like 8 31408980 31413615 + 22301074;30032202 116907161 MODEL JAAIVD010000027;XM_032910119;XM_032910120 XP_032766010;XP_032766011 protein-coding 625913489 Itm2b integral membrane protein 2B ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of amyloid precursor protein biosynthetic process (ortholog); ASSOCIATED WITH cerebral amyloid angiopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi-associated vesicle membrane (ortholog) 12 50997590 51020550 + 30032202 116913138 MODEL JAAIVD010000007;XM_032917341 XP_032773232 protein-coding 625913499 LOC116896023 ubiquitin-like 3 181791068 181791477 + 116896023 MODEL JAAIVD010000012 pseudo 625913500 Tipin TIMELESS interacting protein INVOLVED IN cell cycle phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 8 58584777 58602538 + 22301074;30032202 116907313 MODEL JAAIVD010000027;XM_032910259 XP_032766150 TIMELESS-interacting protein protein-coding 625913512 Ap3m2 adaptor related protein complex 3 subunit mu 2 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic vesicle (ortholog) 13 63614708 63636331 + 22301074;30032202 116914553 MODEL JAAIVD010000008;XM_032918903 XP_032774794 AP-3 complex subunit mu-2 protein-coding 625913525 Wrap73 WD repeat containing, antisense to TP73 INVOLVED IN mitotic spindle assembly (ortholog); positive regulation of non-motile cilium assembly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) 1 6562228 6576927 - 22301074;30032202 116892137 MODEL JAAIVD010000025;XM_032893630;XM_032893638 XP_032749521;XP_032749529 WD repeat-containing protein WRAP73 protein-coding 625913546 LOC116901414 heat shock protein HSP 90-beta-like 5 32651410 32653957 + 22301074;30032202 116901414 MODEL JAAIVD010000023;XM_032903303 XP_032759194 protein-coding 625913551 LOC116909111 olfactory receptor 1468-like 9 44444727 44445665 + 22301074;30032202 116909111 MODEL JAAIVD010000002;XM_032912587 XP_032768478 protein-coding 625913554 Mrps34 mitochondrial ribosomal protein S34 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 32 (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog) 9 2175840 2176980 + 22301074;30032202 116909336 MODEL JAAIVD010000002;XM_032912880 XP_032768771 28S ribosomal protein S34, mitochondrial protein-coding 625913561 LOC116909909 C-C motif chemokine 9-like 9 87115336 87119428 + 22301074;30032202 116909909 MODEL JAAIVD010000002;XM_032913662 XP_032769553 protein-coding 625913569 LOC116886173 40S ribosomal protein S13-like 17 42679835 42680341 + 116886173 MODEL JAAIVD010000011 pseudo 625913570 LOC116908213 microtubule-associated protein 11-like 8 72612878 72615297 + 116908213 MODEL JAAIVD010000027 pseudo 625913571 LOC116888577 SNF-related serine/threonine-protein kinase-like X 71876646 71878990 + 22301074;30032202 116888577 MODEL JAAIVD010000014;XM_032889878 XP_032745769 protein-coding 625913576 Mpzl3 myelin protein zero like 3 INVOLVED IN extracellular matrix organization (ortholog); hair cycle (ortholog); ASSOCIATED WITH lung cancer (ortholog) 8 39586063 39606653 + 22301074;30032202 116906899 MODEL JAAIVD010000027;XM_032909810 XP_032765701 myelin protein zero-like protein 3 protein-coding 625913586 Odaph odontogenesis associated phosphoprotein INVOLVED IN positive regulation of biomineral tissue development (ortholog); positive regulation of enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta hypomaturation type 2A4 (ortholog) 11 4824106 4831693 + 30032202 116912135 MODEL JAAIVD010000006;XM_032916049 XP_032771940 protein-coding 625913592 LOC116915050 neutrophil antibiotic peptide NP-2-like 13 64824127 64824893 - 22301074;30032202 116915050 MODEL JAAIVD010000008;XM_032919462 XP_032775353 protein-coding 625913596 Kiaa1614 KIAA1614 ortholog 10 34633230 34666009 - 30032202 116911641 MODEL JAAIVD010000005;XM_032915600 XP_032771491 uncharacterized protein KIAA1614 homolog protein-coding 625913609 Shkbp1 SH3KBP1 binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog) 2 168589473 168602701 + 22301074 116892432 MODEL JAAIVD010000001;XM_032894122 XP_032750013 SH3KBP1-binding protein 1 protein-coding 625913631 LOC116889178 DDB1- and CUL4-associated factor 12-like protein 2 X 108202455 108204058 + 22301074;30032202 116889178 MODEL JAAIVD010000014;XM_032890342 XP_032746233 protein-coding 625913636 LOC116884028 60S ribosomal protein L11-like 14 26777098 26777596 - 116884028 MODEL JAAIVD010000009 pseudo 625913637 Kcnj5 potassium inwardly rectifying channel subfamily J member 5 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); potassium ion import across plasma membrane (ortholog); regulation of heart rate by cardiac conduction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); Andersen-Tawil syndrome (ortholog); atrial fibrillation (ortholog); FOUND IN external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog); T-tubule (ortholog) 8 28008238 28036141 - 22301074;30032202 116907840 MODEL JAAIVD010000027;XM_032911027;XM_032911028 XP_032766918;XP_032766919 G protein-activated inward rectifier potassium channel 4 protein-coding 625913649 Pum2 pumilio RNA binding family member 2 ENCODES a protein that exhibits lncRNA binding (ortholog); miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN adipose tissue development (ortholog); chromosome organization (ortholog); hair follicle development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 7 28913555 28993274 + 30032202 116906300 MODEL JAAIVD010000026;XM_032909193;XM_032909194;XM_032909195;XM_032909196;XM_032909197;XM_032909198;XM_032909199;XM_032909200;XM_032909201;XM_032909203;XM_032909204;XM_032909205;XM_032909206;XM_032909207;XM_032909208 XP_032765084;XP_032765085;XP_032765086;XP_032765087;XP_032765088;XP_032765089;XP_032765090;XP_032765091;XP_032765092;XP_032765094;XP_032765095;XP_032765096;XP_032765097;XP_032765098;XP_032765099 pumilio homolog 2 protein-coding 625913699 LOC116891115 60S ribosomal protein L35a-like 2 34849184 34849511 + 116891115 MODEL JAAIVD010000001 pseudo 625913700 LOC116906114 delta-aminolevulinic acid dehydratase-like 7 82226238 82227215 + 116906114 MODEL JAAIVD010000026 pseudo 625913701 Tm4sf4 transmembrane 4 L six family member 4 INVOLVED IN tissue regeneration (ortholog); ASSOCIATED WITH liver disease (ortholog) 3 96006899 96029183 + 22301074;30032202 116895865 MODEL JAAIVD010000012;XM_032896967 XP_032752858 transmembrane 4 L6 family member 4 protein-coding 625913709 Pgm3 phosphoglucomutase 3 ENCODES a protein that exhibits phosphoacetylglucosamine mutase activity (ortholog); INVOLVED IN hemopoiesis (ortholog); protein N-linked glycosylation (ortholog); protein O-linked glycosylation (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; glycogen biosynthetic pathway; ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); hyper IgE syndrome (ortholog) 8 80599200 80617460 - 22301074;30032202 116906809 MODEL JAAIVD010000027;XM_032909683 XP_032765574 phosphoacetylglucosamine mutase protein-coding 625913726 Cacybp calcyclin binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to calcium ion (ortholog); cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH myocardial infarction (ortholog); Neoplasm Metastasis (ortholog); pancreatic cancer (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell body (ortholog); cytoplasm (ortholog) 10 39490152 39500799 - 22301074;30032202 116911153 MODEL JAAIVD010000005;XM_032915008 XP_032770899 calcyclin-binding protein protein-coding 625913736 LOC116913355 eosinophil cationic protein-like 12 71284644 71285114 + 22301074;30032202 116913355 MODEL JAAIVD010000007;XM_032917509 XP_032773400 protein-coding 625913739 LOC116893997 olfactory receptor 51I2-like 2 101580819 101581763 + 22301074 116893997 MODEL JAAIVD010000001;XM_032895712 XP_032751603 protein-coding 625913742 Cnga4 cyclic nucleotide gated channel subunit alpha 4 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); potassium ion transport (ortholog); sensory perception of smell (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); non-motile cilium membrane (ortholog); perikaryon (ortholog) 2 104239539 104243604 + 30032202 116894148 MODEL JAAIVD010000001;XM_032895867 XP_032751758 cyclic nucleotide-gated cation channel alpha-4 protein-coding 625913752 Fam180b family with sequence similarity 180 member B 5 65066195 65068729 - 116900866 MODEL JAAIVD010000023;XM_032902550 XP_032758441 protein FAM180B protein-coding 625913757 LOC116897787 olfactory receptor 2M3-like 4 4367500 4368447 - 22301074 116897787 MODEL JAAIVD010000003;XM_032899209 XP_032755100 protein-coding 625913760 LOC116885528 annexin A7-like 1 151185475 151186833 + 116885528 MODEL JAAIVD010000025 pseudo 625913761 Zcchc3 zinc finger CCHC-type containing 3 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); FOUND IN cytoplasm (ortholog) 5 131725232 131728068 - 22301074;30032202 116902122 MODEL JAAIVD010000023;XM_032904437 XP_032760328 zinc finger CCHC domain-containing protein 3 protein-coding 625913766 LOC116914112 small nucleolar RNA SNORA48 12 36916429 36916572 + 116914112 MODEL JAAIVD010000007;XR_004389677 snorna 625913769 Naaa N-acylethanolamine acid amidase ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); membrane (ortholog) 11 5107481 5125297 - 22301074 116912704 MODEL JAAIVD010000006;XM_032916832 XP_032772723 N-acylethanolamine-hydrolyzing acid amidase protein-coding 625913783 LOC116894912 U7 small nuclear RNA 2 109070805 109070868 + 116894912 MODEL JAAIVD010000001;XR_004387114 snrna 625913786 Ppip5k1 diphosphoinositol pentakisphosphate kinase 1 ENCODES a protein that exhibits 5-diphosphoinositol pentakisphosphate 1-kinase activity (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol metabolic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 99463696 99503000 - 30032202 116901856 MODEL JAAIVD010000023;XM_032904051 XP_032759942 inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 1 protein-coding 625913820 Shprh SNF2 histone linker PHD RING helicase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); protein polyubiquitination (ortholog) 2 225993260 226058970 - 22301074;30032202 116893021 MODEL JAAIVD010000001;XM_032894981 XP_032750872 E3 ubiquitin-protein ligase SHPRH protein-coding 625913853 LOC116887363 olfactory receptor 10C1-like 18 10624527 10625498 + 22301074 116887363 MODEL JAAIVD010000013;XM_032888958;XM_032888959 XP_032744849;XP_032744850 olfactory receptor 10A2-like protein-coding 625913860 Gabpb2 GA binding protein transcription factor subunit beta 2 ENCODES a protein that exhibits identical protein binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 3 62029906 62062820 + 22301074;30032202 116896562 MODEL JAAIVD010000012;XM_032897758;XM_032897759 XP_032753649;XP_032753650 GA-binding protein subunit beta-2 protein-coding 625913875 Slc39a8 solute carrier family 39 member 8 ENCODES a protein that exhibits monoatomic cation:bicarbonate symporter activity (ortholog); zinc:bicarbonate symporter activity (ortholog); INVOLVED IN arginine metabolic process (ortholog); bicarbonate transport (ortholog); cadmium ion transmembrane transport (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIn (ortholog); Crohn's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lysosomal membrane (ortholog) 3 23217584 23278645 - 22301074;30032202 116896220 MODEL JAAIVD010000012;XM_032897275 XP_032753166 zinc transporter ZIP8 protein-coding 625913888 LOC116894948 small nucleolar RNA SNORA72 2 172621922 172622053 + 116894948 MODEL JAAIVD010000001;XR_004387144 snorna 625913891 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60959070 60959143 - 116897694 MODEL JAAIVD010000012 trna 625913892 Ak4 adenylate kinase 4 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 53086990 53139905 - 22301074;30032202 116899707 MODEL JAAIVD010000025;XM_032901747 XP_032757638 adenylate kinase 4, mitochondrial protein-coding 625913901 LOC116896782 40S ribosomal protein S26 3 81381195 81381638 - 22301074;30032202 116896782 MODEL JAAIVD010000012;XM_032898241 XP_032754132 protein-coding 625913906 Pithd1 PITH domain containing 1 INVOLVED IN penetration of cumulus oophorus (ortholog); penetration of zona pellucida (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); sperm cytoplasmic droplet (ortholog) 1 22243867 22254295 + 30032202 116894460 MODEL JAAIVD010000025;XM_032896173 XP_032752064 PITH domain-containing protein 1 protein-coding 625913916 LOC116908244 rRNA-processing protein FCF1 homolog 8 86884823 86885404 + 116908244 MODEL JAAIVD010000027 pseudo 625913917 Agap2 ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glycine (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); Memory Disorders (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 1 205503539 205520421 + 22301074;30032202 116909789 MODEL JAAIVD010000025;XM_032913489;XM_032913495;XM_032913501 XP_032769380;XP_032769386;XP_032769392 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 protein-coding 625913948 LOC116895503 60S ribosomal protein L31-like 3 107955585 107956008 + 22301074;30032202 116895503 MODEL JAAIVD010000012;XM_032896756 XP_032752647 protein-coding 625913953 Emc9 ER membrane protein complex subunit 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog) 12 69422896 69427110 + 22301074;30032202 116913675 MODEL JAAIVD010000007;XM_032917963 XP_032773854 protein-coding 625913962 LOC116913275 60S ribosomal protein L4-like 12 85537261 85544675 + 116913275 MODEL JAAIVD010000007 pseudo 625913963 Apoh apolipoprotein H ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); lipid binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation, intrinsic pathway (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH antiphospholipid syndrome (ortholog); arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); extracellular space (ortholog) 9 70728623 70741993 - 2771654 116908814 MODEL JAAIVD010000002;X15551;XM_032912220;XM_032912221 CAA33556;XP_032768111;XP_032768112 beta-2-glycoprotein 1 protein-coding 625913978 Dnase1l2 deoxyribonuclease 1 like 2 INVOLVED IN corneocyte development (ortholog); DNA catabolic process (ortholog); hair follicle development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 9 1730572 1732767 - 22301074;30032202 116910468 MODEL JAAIVD010000002;XM_032914340 XP_032770231 deoxyribonuclease-1-like 2 protein-coding 625913988 LOC116912383 uncharacterized LOC116912383 11 66468714 66523291 - 116912383 MODEL JAAIVD010000006;XR_004389452;XR_004389453 ncrna 625913996 LOC116897717 60S ribosomal protein L29-like 4 5214929 5221619 + 116897717 MODEL JAAIVD010000003 pseudo 625913997 Ctps2 CTP synthase 2 ENCODES a protein that exhibits CTP synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CTP biosynthetic process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; ASSOCIATED WITH colorectal cancer (ortholog); Laterality Defects, Autosomal Dominant (ortholog); FOUND IN cytoophidium (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) X 23343742 23461590 - 22301074;30032202 116888394 MODEL JAAIVD010000014;XM_032889667 XP_032745558 protein-coding 625914019 Mecr mitochondrial trans-2-enoyl-CoA reductase ENCODES a protein that exhibits enoyl-[acyl-carrier-protein] reductase (NADPH) activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); fatty acid metabolic process (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN fatty acid elongation pathway; ASSOCIATED WITH childhood-onset dystonia with optic atrophy and basal ganglia abnormalities (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 1 26385151 26411117 - 30032202 116895724 MODEL JAAIVD010000025;XM_032896908;XM_032896911;XM_032896913;XM_032896915;XM_032896919 XP_032752799;XP_032752802;XP_032752804;XP_032752806;XP_032752810 enoyl-[acyl-carrier-protein] reductase, mitochondrial protein-coding 625914046 Mzf1 myeloid zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) 2 174132249 174144494 + 30032202 116892617 MODEL JAAIVD010000001;XM_032894424 XP_032750315 protein-coding 625914056 Apela apelin receptor early endogenous ligand ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 13 24118305 24127640 + 22301074 116914496 MODEL JAAIVD010000008;XM_032918810 XP_032774701 protein-coding 625914063 LOC116895613 uncharacterized LOC116895613 3 169698075 169707699 + 116895613 MODEL JAAIVD010000012;XR_004387295 ncrna 625914067 LOC116889578 U6 spliceosomal RNA X 9372047 9372153 + 116889578 MODEL JAAIVD010000014;XR_004386494 snrna 625914070 Dnajc24 DnaJ heat shock protein family (Hsp40) member C24 ENCODES a protein that exhibits ATPase activator activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of ATP-dependent activity (ortholog); protein histidyl modification to diphthamide (ortholog); FOUND IN actin cytoskeleton (ortholog) 5 83879155 83923706 - 30032202 116901716 MODEL JAAIVD010000023;XM_032903847 XP_032759738 dnaJ homolog subfamily C member 24 protein-coding 625914079 Rbm5 RNA binding motif protein 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 99063296 99092143 - 22301074;30032202 116907543 MODEL JAAIVD010000027;XM_032910564;XM_032910565;XM_032910566;XM_032910567 XP_032766455;XP_032766456;XP_032766457;XP_032766458 RNA-binding protein 5 protein-coding 625914117 Apoc4 apolipoprotein C4 INVOLVED IN lipid storage (ortholog); triglyceride homeostasis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN high-density lipoprotein particle (ortholog); very-low-density lipoprotein particle (ortholog) 2 170934659 170938764 + 30032202 116892516 MODEL JAAIVD010000001;XM_032894272 XP_032750163 apolipoprotein C-IV protein-coding 625914124 LOC116893321 serum amyloid A-1 protein-like 2 152624422 152628401 + 116893321 MODEL JAAIVD010000001 pseudo 625914125 Mboat2 membrane bound glycerophospholipid O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 38434193 38556468 + 30032202 116904918 MODEL JAAIVD010000026;XM_032907527;XM_032907528;XM_032907529 XP_032763418;XP_032763419;XP_032763420 lysophospholipid acyltransferase 2;membrane bound O-acyltransferase domain containing 2 protein-coding 625914151 LOC116896050 pyruvate kinase PKM-like 3 199681274 199688860 + 116896050 MODEL JAAIVD010000012 pseudo 625914152 Asah1 N-acylsphingosine amidohydrolase 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 13 46194911 46225686 + 22301074;30032202 116915067 MODEL JAAIVD010000008;XM_032919485 XP_032775376 acid ceramidase protein-coding 625914170 Tbc1d14 TBC1 domain family member 14 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); recycling endosome to Golgi transport (ortholog); regulation of autophagosome assembly (ortholog); FOUND IN autophagosome (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 11 68521234 68615206 + 30032202 116912885 MODEL JAAIVD010000006;XM_032917122;XM_032917123;XM_032917124;XM_032917125;XM_032917126 XP_032773013;XP_032773014;XP_032773015;XP_032773016;XP_032773017 protein-coding 625914202 LOC116914184 U6 spliceosomal RNA 12 21664761 21664856 + 116914184 MODEL JAAIVD010000007 pseudo 625914203 LOC116905700 60S ribosomal protein L37-like 7 62391557 62391934 + 22301074;30032202 116905700 MODEL JAAIVD010000026;XM_032908676 XP_032764567 protein-coding 625914208 LOC116890323 U6 spliceosomal RNA 1 154891167 154891273 - 116890323 MODEL JAAIVD010000025;XR_004386546 snrna 625914211 Ppp2r5b protein phosphatase 2 regulatory subunit B'beta INVOLVED IN cellular response to growth factor stimulus (ortholog); negative regulation of G0 to G1 transition (ortholog); positive regulation of DNA-binding transcription factor activity (ortholog) 2 1454027 1462018 + 22301074;30032202 116890669 MODEL JAAIVD010000001;XM_032891075 XP_032746966 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit beta isoform protein-coding 625914229 LOC116894055 olfactory receptor 51F2-like 2 102749325 102750269 - 22301074 116894055 MODEL JAAIVD010000001;XM_032895777 XP_032751668 protein-coding 625914232 LOC116885978 U4 spliceosomal RNA 16 9245119 9245254 + 116885978 MODEL JAAIVD010000004;XR_004386059 snrna 625914235 LOC116889705 chaperone protein DnaK-like 22301074;30032202 116889705 MODEL JAAIVD010000059;XM_032890587 XP_032746478 protein-coding 625914236 LOC116891289 oogenesin-3-like 1 52630965 52631643 - 30032202 116891289 MODEL JAAIVD010000025;XM_032892231 XP_032748122 protein-coding 625914240 Hacd4 3-hydroxyacyl-CoA dehydratase 4 ENCODES a protein that exhibits enzyme binding (ortholog); very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 65688026 65713751 + 30032202 116900401 MODEL JAAIVD010000025;XM_032902150 XP_032758041 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 4 protein-coding 625914251 Raly RALY heterogeneous nuclear ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) 5 134168933 134238944 + 22301074;30032202 116902167 MODEL JAAIVD010000023;XM_032904508;XM_032904509;XM_032904510 XP_032760399;XP_032760400;XP_032760401 RNA-binding protein Raly protein-coding 625914271 Nr2f2 nuclear receptor subfamily 2 group F member 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blood vessel morphogenesis (ortholog); female gonad development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 5 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 130020767 130034500 + 22301074;30032202 116891976 MODEL JAAIVD010000001;XM_032893416;XM_032893417;XM_032893418 XP_032749307;XP_032749308;XP_032749309 COUP transcription factor 2 protein-coding 625914286 Fxyd5 FXYD domain containing ion transport regulator 5 ENCODES a protein that exhibits actin binding (ortholog); cadherin binding (ortholog); ion channel regulator activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 164989414 164999135 + 22301074;30032202 116892293 MODEL JAAIVD010000001;XM_032893901 XP_032749792 FXYD domain-containing ion transport regulator 5 protein-coding 625914299 St6galnac3 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 ENCODES a protein that exhibits sialyltransferase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); glycosphingolipid metabolic process (ortholog); glycosylceramide metabolic process (ortholog); FOUND IN nucleoplasm (ortholog) 3 7922478 8425505 + 22301074;30032202 116896146 MODEL JAAIVD010000012;XM_032897130 XP_032753021 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3 protein-coding 625914308 Ddx21 DExD-box helicase 21 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); FOUND IN B-WICH complex (ortholog); chromosome (ortholog); cytosol (ortholog) 18 28416128 28435161 - 22301074;30032202 116887048 MODEL JAAIVD010000013;XM_032888539 XP_032744430 nucleolar RNA helicase 2 protein-coding 625914327 Clec7a C-type lectin domain containing 7A ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); (1->3)-beta-D-glucan immune receptor activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); cell activation (ortholog); ASSOCIATED WITH aspergillosis (ortholog); Candidiasis, Familial, 4 (ortholog); chronic mucocutaneous candidiasis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) 6 18131910 18143037 + 30032202 116904562 MODEL JAAIVD010000024;XM_032907358;XM_032907359 XP_032763249;XP_032763250 C-type lectin domain family 7 member A protein-coding 625914339 LOC116886034 olfactory receptor 10K2-like 17 16735032 16735976 - 22301074 116886034 MODEL JAAIVD010000011;XM_032887327 XP_032743218 protein-coding 625914342 Cryz crystallin zeta ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); NADH binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); protein homotetramerization (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 3 6825230 6853370 - 22301074;30032202 116896139 MODEL JAAIVD010000012;XM_032897123 XP_032753014 quinone oxidoreductase protein-coding 625914355 Clic2 chloride intracellular channel 2 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN regulation of cardiac muscle contraction by regulation of the release of sequestered calcium ion (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); X-linked intellectual disability-cardiomegaly-congestive heart failure syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 11144886 11150436 - 116887347 MODEL JAAIVD010000013;XM_032888940 XP_032744831 chloride intracellular channel protein 2 protein-coding 625914364 Txndc16 thioredoxin domain containing 16 FOUND IN endoplasmic reticulum lumen (ortholog) 12 77817569 77883425 + 116913758 MODEL JAAIVD010000007;XM_032918065 XP_032773956 thioredoxin domain-containing protein 16 protein-coding 625914389 LOC116904129 protein piccolo-like 1 152008413 152074904 - 30032202 116904129 MODEL JAAIVD010000025;XM_032907019 XP_032762910 protein-coding 625914399 Gata5 GATA binding protein 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cardiac jelly development (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic valve disease 1 (ortholog); ARTERIAL DISSECTION (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 5 157403484 157411690 - 22301074;30032202 116902409 MODEL JAAIVD010000023;XM_032904938 XP_032760829 transcription factor GATA-5 protein-coding 625914409 LOC116891525 ATPase family AAA domain-containing protein 3 1 4867562 4887469 + 22301074;30032202 116891525 MODEL JAAIVD010000025;XM_032892676;XM_032892683;XR_004386845 XP_032748567;XP_032748574 protein-coding 625914435 Gemin5 gem nuclear organelle associated protein 5 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); ribosome binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN regulation of translation (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH essential tremor (ortholog); genetic disease (ortholog); neurodevelopmental disorder with cerebellar atrophy and motor dysfunction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 40072903 40118135 + 22301074 116908669 MODEL JAAIVD010000002;XM_032911952;XM_032911953;XM_032911954;XM_032911956;XM_032911957;XM_032911958;XM_032911959;XM_032911960 XP_032767843;XP_032767844;XP_032767845;XP_032767847;XP_032767848;XP_032767849;XP_032767850;XP_032767851 gem-associated protein 5 protein-coding 625914481 LOC116883929 glyceraldehyde-3-phosphate dehydrogenase-like 14 9187615 9191654 + 116883929 MODEL JAAIVD010000009 pseudo 625914482 LOC116909865 olfactory receptor 2AK2-like 9 39454033 39454953 - 22301074 116909865 MODEL JAAIVD010000002;XM_032913593 XP_032769484 protein-coding 625914485 Lrrc23 leucine rich repeat containing 23 INVOLVED IN flagellated sperm motility (ortholog); radial spoke assembly (ortholog); ASSOCIATED WITH spermatogenic failure 92 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm flagellum (ortholog) 6 23104472 23114856 + 22301074;30032202 116903280 MODEL JAAIVD010000024;XM_032905699;XM_032905700;XM_032905701;XM_032905702;XR_004388266;XR_004388267 XP_032761590;XP_032761591;XP_032761592;XP_032761593 leucine-rich repeat-containing protein 23 protein-coding 625914513 LOC116907208 serine/threonine-protein kinase Sgk1-like 8 6820387 6844099 - 22301074 116907208 MODEL JAAIVD010000027;XM_032910177 XP_032766068 protein-coding 625914520 LOC116898753 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 4 16169600 16171796 - 116898753 MODEL JAAIVD010000003 pseudo 625914521 Cilk1 ciliogenesis associated kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular signal transduction (ortholog); intraciliary anterograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); coloboma (ortholog); cranioectodermal dysplasia (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); ciliary tip (ortholog) 8 72359828 72418218 + 22301074;30032202 116908307 MODEL JAAIVD010000027;XM_032911585;XM_032911587 XP_032767476;XP_032767478 serine/threonine-protein kinase ICK protein-coding 625914542 LOC116914261 beta-defensin 33 13 64902536 64905046 - 30032202 116914261 MODEL JAAIVD010000008;XM_032918474 XP_032774365 protein-coding 625914548 C13H13orf46 chromosome 13 C13orf46 homolog 13 70143756 70155837 + 116914802 MODEL JAAIVD010000008;XM_032919252 XP_032775143 uncharacterized protein C13orf46 homolog protein-coding 625914561 LOC116885214 rho guanine nucleotide exchange factor 18 16 1311437 1373036 + 22301074 116885214 MODEL JAAIVD010000004;XM_032886444;XM_032886445;XM_032886446;XM_032886447 XP_032742335;XP_032742336;XP_032742337;XP_032742338 protein-coding 625914592 LOC116898014 60S ribosomal protein L35a-like 4 73163822 73164153 + 116898014 MODEL JAAIVD010000003 pseudo 625914593 LOC116890375 U6 spliceosomal RNA 1 13234862 13234959 + 116890375 MODEL JAAIVD010000025 pseudo 625914594 LOC116889433 U6 spliceosomal RNA X 47493771 47493876 - 116889433 MODEL JAAIVD010000014;XR_004386395 snrna 625914597 Lig3 DNA ligase 3 ENCODES a protein that exhibits DNA ligase (ATP) activity (ortholog); DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); double-strand break repair (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); middle cerebral artery infarction (ortholog); FOUND IN condensed nuclear chromosome (ortholog); DNA ligase III-XRCC1 complex (ortholog); mitochondrion (ortholog) 9 87711493 87733192 - 22301074;30032202 116910048 MODEL JAAIVD010000002;XM_032913838;XM_032913839;XM_032913840 XP_032769729;XP_032769730;XP_032769731 protein-coding 625914625 Gtf2ird1 GTF2I repeat domain containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); transition between slow and fast fiber (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); Craniofacial Abnormalities (ortholog); Williams-Beuren syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 19594830 19699864 + 22301074;30032202 116885131 MODEL JAAIVD010000004;XM_032886288;XM_032886289;XM_032886290;XM_032886291;XM_032886292;XM_032886293;XM_032886294;XM_032886295;XM_032886296;XM_032886297;XM_032886298;XM_032886300;XM_032886301;XM_032886302;XM_032886303;XM_032886304;XM_032886305;XM_032886306;XM_032886307 XP_032742179;XP_032742180;XP_032742181;XP_032742182;XP_032742183;XP_032742184;XP_032742185;XP_032742186;XP_032742187;XP_032742188;XP_032742189;XP_032742191;XP_032742192;XP_032742193;XP_032742194;XP_032742195;XP_032742196;XP_032742197;XP_032742198 general transcription factor II-I repeat domain-containing protein 1 protein-coding 625914701 Klhdc10 kelch domain containing 10 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN rescue of stalled ribosome (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 6 109102210 109159466 - 22301074;30032202 116904001 MODEL JAAIVD010000024;XM_032906810;XM_032906811 XP_032762701;XP_032762702 kelch domain-containing protein 10 protein-coding 625914716 LOC116890423 U7 small nuclear RNA 1 221308443 221308505 - 116890423 MODEL JAAIVD010000025;XR_004386622 snrna 625914719 LOC116884980 40S ribosomal protein S18-like 15 52546852 52547311 + 116884980 MODEL JAAIVD010000010 pseudo 625914720 Hid1 HID1 domain containing INVOLVED IN insulin processing (ortholog); response to glucose (ortholog); secretory granule maturation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 105 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic side of Golgi membrane (ortholog) 9 68733369 68753740 + 30032202 116909264 MODEL JAAIVD010000002;XM_032912790;XM_032912791 XP_032768681;XP_032768682 protein HID1 protein-coding 625914745 Styx serine/threonine/tyrosine interacting protein ENCODES a protein that exhibits F-box domain binding (ortholog); pseudophosphatase activity (ortholog); INVOLVED IN negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); regulation of ERK1 and ERK2 cascade (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 77655353 77686630 - 22301074;30032202 116914055 MODEL JAAIVD010000007;XM_032918338;XM_032918339 XP_032774229;XP_032774230 serine/threonine/tyrosine-interacting protein protein-coding 625914763 Clhc1 clathrin heavy chain linker domain containing 1 11 97171147 97194185 + 116912165 MODEL JAAIVD010000006;XM_032916085;XM_032916086 XP_032771976;XP_032771977 clathrin heavy chain linker domain-containing protein 1 protein-coding 625914782 Rps20 ribosomal protein S20 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN positive regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Colorectal Cancer 10 (ortholog); Diamond-Blackfan anemia (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 7 72894476 72895672 + 22301074;2357470;30032202 116905088 MODEL JAAIVD010000026;X51537;XM_032907809 CAA35917;XP_032763700 40S ribosomal protein S20 protein-coding 625914790 Polg2 DNA polymerase gamma 2, accessory subunit ENCODES a protein that exhibits DNA polymerase binding (ortholog); DNA polymerase processivity factor activity (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); in utero embryonic development (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Experimental Diabetes Mellitus (ortholog); mitochondrial DNA depletion syndrome 16 (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 9 72348815 72359511 + 30032202 116909932 MODEL JAAIVD010000002;XM_032913701 XP_032769592 DNA polymerase subunit gamma-2, mitochondrial protein-coding 625914802 LOC116913639 uncharacterized LOC116913639 12 55585717 55589309 + 116913639 MODEL JAAIVD010000007;XR_004389633 ncrna 625914807 Txnip thioredoxin interacting protein ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to tumor cell (ortholog); keratinocyte differentiation (ortholog); negative regulation of cell division (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog) 3 60743208 60747117 - 30032202 116896509 MODEL JAAIVD010000012;XM_032897691 XP_032753582 thioredoxin-interacting protein protein-coding 625914819 LOC116904800 U4 spliceosomal RNA 6 114393299 114393437 + 116904800 MODEL JAAIVD010000024;XR_004388456 snrna 625914822 Bean1 brain expressed associated with NEDD4 1 ASSOCIATED WITH spinocerebellar ataxia type 31 (ortholog) 17 12468233 12514903 + 116886365 MODEL JAAIVD010000011;XM_032887825 XP_032743716 protein BEAN1 protein-coding 625914831 LOC116899399 60S ribosomal protein L30-like 4 131843217 131843613 + 30032202 116899399 MODEL JAAIVD010000003;XM_032901130 XP_032757021 protein-coding 625914835 LOC116914060 60S ribosomal protein L23a-like 12 72326619 72327080 - 116914060 MODEL JAAIVD010000007 pseudo 625914836 LOC116899391 10 kDa heat shock protein, mitochondrial 4 129540710 129588633 + 22301074;30032202 116899391 MODEL JAAIVD010000003;XM_032901114;XM_032901115;XM_032901116 XP_032757005;XP_032757006;XP_032757007 MOB-like protein phocein protein-coding 625914860 Mthfsd methenyltetrahydrofolate synthetase domain containing 17 40748133 40759654 - 22301074;30032202 116886471 MODEL JAAIVD010000011;XM_032887974 XP_032743865 methenyltetrahydrofolate synthase domain-containing protein protein-coding 625914872 LOC116902901 high mobility group protein B1-like 6 106450019 106450773 + 116902901 MODEL JAAIVD010000024 pseudo 625914873 Tbp TATA-box binding protein ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN cisplatin drug pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 478386 495276 - 22301074;30032202 116883874 MODEL JAAIVD010000009;XM_032885140 XP_032741031 TATA-box-binding protein protein-coding 625914885 LOC116889740 citrate synthase, mitochondrial-like 116889740 MODEL JAAIVD010000075 pseudo 625914886 LOC116904371 60S ribosomal protein L24-like 6 87072056 87072545 - 116904371 MODEL JAAIVD010000024 pseudo 625914887 Cyth1 cytohesin 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of cell adhesion (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 65806232 65887806 + 22301074 116910600 MODEL JAAIVD010000002;XM_032914528;XM_032914529 XP_032770419;XP_032770420 cytohesin-1 protein-coding 625914909 Nfkbid NFKB inhibitor delta ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of T cell differentiation in thymus (ortholog); positive regulation of T-helper 17 cell differentiation (ortholog); ASSOCIATED WITH common variable immunodeficiency 12 (ortholog); FOUND IN nucleus (ortholog) 2 165572910 165580159 - 22301074;30032202 116892319 MODEL JAAIVD010000001;XM_032893944 XP_032749835 NF-kappa-B inhibitor delta protein-coding 625914922 LOC116904379 prothymosin alpha-like 6 91675026 91675289 - 116904379 MODEL JAAIVD010000024 pseudo 625914923 Sbsn suprabasin FOUND IN cytoplasm (ortholog) 2 165261292 165264602 - 116892299 MODEL JAAIVD010000001;XM_032893915 XP_032749806 protein-coding 625914928 LOC116901017 uncharacterized LOC116901017 5 128228331 128230323 - 116901017 MODEL JAAIVD010000023;XR_004387956 pseudo 625914932 Ipcef1 interaction protein for cytohesin exchange factors 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); lymphoid leukemia (ortholog) 2 196010904 196085102 + 116892870 MODEL JAAIVD010000001;XM_032894770;XM_032894771;XM_032894772;XM_032894774;XM_032894775 XP_032750661;XP_032750662;XP_032750663;XP_032750665;XP_032750666 interactor protein for cytohesin exchange factors 1 protein-coding 625914956 LOC116887156 uncharacterized LOC116887156 18 42884034 42886002 + 116887156 MODEL JAAIVD010000013;XM_032888703 XP_032744594 uncharacterized protein LOC116887156 protein-coding 625914961 LOC116911830 small nucleolar RNA SNORA17 10 28610996 28611127 - 116911830 MODEL JAAIVD010000005;XR_004389365 snorna 625914964 LOC116904795 U2 spliceosomal RNA 6 37226003 37226152 + 116904795 MODEL JAAIVD010000024 pseudo 625914965 LOC116895243 MTOR-associated protein MEAK7-like 3 25956088 25960743 - 116895243 MODEL JAAIVD010000012 pseudo 625914966 Nelfa negative elongation factor complex member A ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of protein modification process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN cytosol (ortholog); NELF complex (ortholog); nuclear body (ortholog) 11 70922209 70946037 + 30032202 116912326 MODEL JAAIVD010000006;XM_032916362 XP_032772253 negative elongation factor A protein-coding 625914981 Ly6g5c lymphocyte antigen 6 family member G5C ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 18 7707998 7712085 + 30032202 116887687 MODEL JAAIVD010000013;XM_032889282 XP_032745173 lymphocyte antigen 6 complex locus protein G5c protein-coding 625914988 Chka choline kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); choline binding (ortholog); choline kinase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); choline metabolic process (ortholog); ethanolamine metabolic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH colon adenoma (ortholog); colon cancer (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) 2 3756633 3802938 - 30032202 116890803 MODEL JAAIVD010000001;XM_032891285;XM_032891286;XM_032891287;XM_032891288 XP_032747176;XP_032747177;XP_032747178;XP_032747179 protein-coding 625915013 Ldlrad2 low density lipoprotein receptor class A domain containing 2 1 20652190 20656343 + 22301074 116886606 MODEL JAAIVD010000025;XM_032888120 XP_032744011 low-density lipoprotein receptor class A domain-containing protein 2 protein-coding 625915021 Rnase12 ribonuclease A family member 12 (inactive) 12 72248678 72258914 + 22301074;30032202 116913616 MODEL JAAIVD010000007;XM_032917868 XP_032773759 probable inactive ribonuclease-like protein 12 protein-coding 625915027 Ube2a ubiquitin conjugating enzyme E2 A ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); DNA repair (ortholog); ASSOCIATED WITH genetic disease (ortholog); syndromic X-linked intellectual disability Nascimento type (ortholog); FOUND IN chromatin (ortholog); HULC complex (ortholog); XY body (ortholog) X 103055525 103065703 + 30032202 116889352 MODEL JAAIVD010000014;XM_032890462;XM_032890463 XP_032746353;XP_032746354 ubiquitin-conjugating enzyme E2 A protein-coding 625915041 LOC116909117 C-C motif chemokine 3 9 87049100 87050489 + 22301074;30032202 116909117 MODEL JAAIVD010000002;XM_032912593 XP_032768484 protein-coding 625915048 LOC116885118 small nucleolar RNA SNORA42/SNORA80 family 15 64282384 64282515 - 116885118 MODEL JAAIVD010000010;XR_004385981 snorna 625915051 Jag1 jagged canonical Notch ligand 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); Notch binding (ortholog); phospholipid binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN Alagille syndrome pathway; altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 1 (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 5 116665740 116701378 - 22301074;30032202 116902022 MODEL JAAIVD010000023;XM_032904296 XP_032760187 protein jagged-1 protein-coding 625915081 LOC116910333 zinc finger protein 120-like 9 62165765 62173174 - 30032202 116910333 MODEL JAAIVD010000002;XM_032914192 XP_032770083 protein-coding 625915089 LOC116894392 keratin-associated protein 20-2-like 2 157140274 157140465 + 116894392 MODEL JAAIVD010000001;XM_032896099 XP_032751990 protein-coding 625915092 LOC116914835 high mobility group protein B1-like 13 34489420 34490200 + 116914835 MODEL JAAIVD010000008 pseudo 625915093 Cables1 Cdk5 and Abl enzyme substrate 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog) 15 31665477 31767807 - 22301074;30032202 116884870 MODEL JAAIVD010000010;XM_032886110 XP_032742001 CDK5 and ABL1 enzyme substrate 1 protein-coding 625915107 LOC116893210 NADP-dependent malic enzyme, mitochondrial-like 2 111336569 111366969 - 22301074;30032202 116893210 MODEL JAAIVD010000001;XM_032895098 XP_032750989 protein-coding 625915119 LOC116901044 DNA (cytosine-5)-methyltransferase 3C-like 5 133024378 133053500 + 22301074;30032202 116901044 MODEL JAAIVD010000023;XM_032902625 XP_032758516 protein-coding 625915139 LOC116886759 5S ribosomal RNA 17 43164088 43164206 - 116886759 MODEL JAAIVD010000011;XR_004386160 rrna 625915142 Znf703 zinc finger protein 703 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); cellular response to estradiol stimulus (ortholog); mammary gland epithelial cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear matrix (ortholog) 13 59537609 59541878 - 30032202 116914703 MODEL JAAIVD010000008;XM_032919130 XP_032775021 protein-coding 625915148 LOC116910972 transmembrane protein 64-like 10 88801843 88836852 - 116910972 MODEL JAAIVD010000005 pseudo 625915149 LOC116904359 serine/threonine-protein phosphatase 6 catalytic subunit-like 6 81736589 81766524 + 116904359 MODEL JAAIVD010000024 pseudo 625915150 LOC116906157 uncharacterized LOC116906157 7 98287261 98307745 - 116906157 MODEL JAAIVD010000026;XM_032909138 XP_032765029 uncharacterized protein LOC116906157 protein-coding 625915156 LOC116905014 AP-2 complex subunit mu-like 7 2017563 2021897 + 116905014 MODEL JAAIVD010000026 pseudo 625915157 LOC116913397 importin-5-like 12 8328865 8331118 - 116913397 MODEL JAAIVD010000007 pseudo 625915158 LOC116887774 small nucleolar RNA SNORA70 18 23767967 23768102 + 116887774 MODEL JAAIVD010000013;XR_004386271 snorna 625915161 LOC116887944 prohibitin-like X 62376347 62386124 + 116887944 MODEL JAAIVD010000014 pseudo 625915162 LOC116890274 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 1 18196064 18199682 + 116890274 MODEL JAAIVD010000025 pseudo 625915163 LOC116900119 low-density lipoprotein receptor-related protein 1B-like 5 19626560 19817492 + 22301074 116900119 MODEL JAAIVD010000023;XM_032901895 XP_032757786 protein-coding 625915169 LOC116903866 nucleoside diphosphate kinase B-like 6 92716235 92716900 + 22301074;30032202 116903866 MODEL JAAIVD010000024;XM_032906614 XP_032762505 protein-coding 625915174 Fgf13 fibroblast growth factor 13 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching morphogenesis of a nerve (ortholog); cerebral cortex cell migration (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 90 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) X 120442028 120450554 + 22301074;30032202 116889322 MODEL JAAIVD010000014;XM_032890445 XP_032746336 protein-coding 625915181 LOC116890101 olfactory receptor 10H5-like 1 232486443 232487494 - 22301074 116890101 MODEL JAAIVD010000025;XM_032890848 XP_032746739 protein-coding 625915185 Raver2 ribonucleoprotein, PTB binding 2 FOUND IN nucleus (ortholog) 1 53391748 53471990 - 22301074;30032202 116899744 MODEL JAAIVD010000025;XM_032901774 XP_032757665 ribonucleoprotein PTB-binding 2 protein-coding 625915201 Hmgb4 high mobility group box 4 1 29870073 29870751 + 30032202 116896405 MODEL JAAIVD010000025;XM_032897550 XP_032753441 high mobility group protein B4 protein-coding 625915206 Inka2 inka box actin regulator 2 ENCODES a protein that exhibits protein kinase binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 52414672 52428089 - 30032202 116896418 MODEL JAAIVD010000012;XM_032897563 XP_032753454 PAK4-inhibitor INKA2 protein-coding 625915212 LOC116914047 40S ribosomal protein S20-like 12 63019139 63019525 + 116914047 MODEL JAAIVD010000007 pseudo 625915213 LOC116897631 U1 spliceosomal RNA 3 125424586 125424733 - 116897631 MODEL JAAIVD010000012 pseudo 625915214 Adam33 ADAM metallopeptidase domain 33 ASSOCIATED WITH asthma (ortholog); Breast Neoplasms (ortholog); Bronchial Hyperreactivity (ortholog) 5 110787667 110799663 - 22301074 116900637 MODEL JAAIVD010000023;XM_032902349 XP_032758240 disintegrin and metalloproteinase domain-containing protein 33 protein-coding 625915238 C3H4orf33 chromosome 3 C4orf33 homolog 3 112184140 112193401 - 116896901 MODEL JAAIVD010000012;XM_032898448;XM_032898449 XP_032754339;XP_032754340 UPF0462 protein C4orf33 homolog protein-coding 625915247 LOC116887840 ferritin light chain 1-like X 38897526 38955157 - 116887840 MODEL JAAIVD010000014 pseudo 625915248 Prom2 prominin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN negative regulation of caveolin-mediated endocytosis (ortholog); negative regulation of pinocytosis (ortholog); positive regulation of cell projection organization (ortholog); FOUND IN cell projection (ortholog); cell surface (ortholog); cilium (ortholog) 5 106312012 106324893 - 30032202 116900621 MODEL JAAIVD010000023;XM_032902340 XP_032758231 prominin-2 protein-coding 625915276 LOC116889612 histone demethylase UTY-like Y 2054813 2086528 + 22301074;30032202 116889612 MODEL JAAIVD010000015;XM_032890539;XM_032890540 XP_032746430;XP_032746431 protein-coding 625915287 LOC116906954 putative olfactory receptor 8G3 pseudogene 8 82734819 82735742 + 22301074;30032202 116906954 MODEL JAAIVD010000027;XM_032909875 XP_032765766 protein-coding 625915290 LOC116898181 glyceraldehyde-3-phosphate dehydrogenase-like 4 130932553 130933505 + 116898181 MODEL JAAIVD010000003 pseudo 625915291 Pdgfrb platelet derived growth factor receptor beta ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); kinase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); aorta morphogenesis (ortholog); blood vessel development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); basal ganglia calcification (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 15 70862900 70910247 - 22301074;30032202 116884436 MODEL JAAIVD010000010;XM_032885524;XM_032885525 XP_032741415;XP_032741416 platelet-derived growth factor receptor beta protein-coding 625915322 Zfp42 ZFP42 zinc finger protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); female gonad development (ortholog); genomic imprinting (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 13 44697047 44698147 - 30032202 116914655 MODEL JAAIVD010000008;XM_032919056 XP_032774947 zinc finger protein 42 homolog protein-coding 625915327 LOC116885862 uncharacterized LOC116885862 16 7613403 7617929 + 116885862 MODEL JAAIVD010000004 pseudo 625915328 Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 ENCODES a protein that exhibits iron ion binding (ortholog); metal ion binding (ortholog); procollagen galactosyltransferase activity (ortholog); INVOLVED IN basement membrane assembly (ortholog); cellular response to hormone stimulus (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH Bone Fragility with Contractures, Arterial Rupture, and Deafness (ortholog); Cerebral Hemorrhage (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 16 17022333 17032922 - 22301074;30032202 116885440 MODEL JAAIVD010000004;XM_032886723 XP_032742614 multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 protein-coding 625915351 LOC116894769 cysteine protease ATG4B-like 2 214833045 214838331 + 116894769 MODEL JAAIVD010000001 pseudo 625915352 Ephb2 EPH receptor B2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Anorectal Malformations (ortholog); Candidemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 1 21393144 21575100 + 22301074;30032202 116894228 MODEL JAAIVD010000025;XM_032895938;XM_032895942;XM_032895949;XM_032895957 XP_032751829;XP_032751833;XP_032751840;XP_032751848 ephrin type-B receptor 2 protein-coding 625915380 LOC116883577 urinary protein 3-like 14 42206593 42210174 + 116883577 MODEL JAAIVD010000009;XM_032884758 XP_032740649 protein-coding 625915388 LOC116897763 5'-AMP-activated protein kinase catalytic subunit alpha-1-like 4 7773157 7776007 + 116897763 MODEL JAAIVD010000003 pseudo 625915389 LOC116893698 olfactory receptor 5B3-like 2 13079437 13080363 + 22301074;30032202 116893698 MODEL JAAIVD010000001;XM_032895415 XP_032751306 protein-coding 625915393 LOC116900670 zinc finger protein 431-like 5 128304956 128305500 - 22301074 116900670 MODEL JAAIVD010000023;XM_032902374 XP_032758265 protein-coding 625915397 LOC116912967 small Cajal body-specific RNA 23 11 4890611 4890737 - 116912967 MODEL JAAIVD010000006;XR_004389533 ncrna 625915400 LOC116889738 uncharacterized 16.1 kDa HIT-like protein 22301074;30032202 116889738 MODEL JAAIVD010000072;XM_032890610 XP_032746501 protein-coding 625915401 Sde2 spliceosome associated SDE2 ENCODES a protein that exhibits damaged DNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN cellular response to UV (ortholog); endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 10 59168214 59183388 + 30032202 116911253 MODEL JAAIVD010000005;XM_032915153 XP_032771044 SDE2 telomere maintenance homolog;replication stress response regulator SDE2 protein-coding 625915412 LOC116906967 zinc finger protein 883-like 1 157855916 157869939 - 30032202 116906967 MODEL JAAIVD010000025;XM_032909891;XM_032909897;XM_032909905 XP_032765782;XP_032765788;XP_032765796 protein-coding 625915425 LOC116896283 heat shock cognate 71 kDa protein-like 3 34056487 34058496 + 116896283 MODEL JAAIVD010000012 pseudo 625915426 LOC116887856 high mobility group protein B4-like X 44039389 44040210 + 30032202 116887856 MODEL JAAIVD010000014;XM_032889358 XP_032745249 protein-coding 625915430 LOC116899967 40S ribosomal protein S11-like 5 106991452 107001871 - 116899967 MODEL JAAIVD010000023 pseudo 625915431 Crlf3 cytokine receptor like factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 9 90350690 90386914 + 22301074 116909169 MODEL JAAIVD010000002;XM_032912659;XM_032912660 XP_032768550;XP_032768551 cytokine receptor-like factor 3 protein-coding 625915445 LOC116898558 putative sperm motility kinase W 4 154880910 154882381 + 22301074;30032202 116898558 MODEL JAAIVD010000003;XM_032899766 XP_032755657 protein-coding 625915448 Cdc16 cell division cycle 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 13 69942679 69965620 - 22301074;30032202 116914462 MODEL JAAIVD010000008;XM_032918763 XP_032774654 cell division cycle protein 16 homolog protein-coding 625915471 Mad2l1 mitotic arrest deficient 2 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN establishment of centrosome localization (ortholog); establishment of mitotic spindle orientation (ortholog); mitotic sister chromatid segregation (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 6 76338307 76349934 + 30032202 116903700 MODEL JAAIVD010000024;XM_032906374;XM_032906375;XM_032906376 XP_032762265;XP_032762266;XP_032762267 mitotic spindle assembly checkpoint protein MAD2A protein-coding 625915486 Traf2 TNF receptor associated factor 2 ENCODES a protein that exhibits CD40 receptor binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN CD27 signaling pathway (ortholog); CD40 signaling pathway (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Transplant Rejection (ortholog); FOUND IN CD40 receptor complex (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 5 11631318 11656299 + 22301074;30032202 116901292 MODEL JAAIVD010000023;XM_032903082;XM_032903083;XM_032903084;XM_032903085 XP_032758973;XP_032758974;XP_032758975;XP_032758976 TNF receptor-associated factor 2 protein-coding 625915510 LOC116910290 NACHT, LRR and PYD domains-containing protein 1a-like 9 44394317 44432552 + 30032202 116910290 MODEL JAAIVD010000002;XM_032914164 XP_032770055 protein-coding 625915519 LOC116915124 small nucleolar RNA SNORA17 13 68604123 68604249 + 116915124 MODEL JAAIVD010000008;XR_004389805 snorna 625915522 Mipol1 mirror-image polydactyly 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH polydactyly (ortholog); FOUND IN nucleus (ortholog) 7 70602903 70895282 + 116905070 MODEL JAAIVD010000026;XM_032907776 XP_032763667 mirror-image polydactyly gene 1 protein protein-coding 625915537 Gapt GRB2 binding adaptor protein, transmembrane INVOLVED IN B cell homeostasis (ortholog); B cell proliferation involved in immune response (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 3 186672746 186674931 + 22301074;30032202 116895660 MODEL JAAIVD010000012;XM_032896866 XP_032752757 protein GAPT protein-coding 625915543 Mrpl47 mitochondrial ribosomal protein L47 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 122264425 122275728 + 22301074;30032202 116896961 MODEL JAAIVD010000012;XM_032898539 XP_032754430 39S ribosomal protein L47, mitochondrial protein-coding 625915554 LOC116907002 zinc finger CCCH domain-containing protein 15-like 8 49073497 49074884 - 116907002 MODEL JAAIVD010000027 pseudo 625915555 LOC116893332 kallikrein-2-like 2 155434875 155440330 - 116893332 MODEL JAAIVD010000001 pseudo 625915556 Lmcd1 LIM and cysteine rich domains 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH coronary stenosis (ortholog); mitral valve insufficiency (ortholog); mitral valve prolapse (ortholog); FOUND IN nucleus (ortholog) 6 34184905 34243858 - 22301074 116904642 MODEL JAAIVD010000024;XM_032907435 XP_032763326 LIM and cysteine-rich domains protein 1 protein-coding 625915566 Efr3b EFR3 homolog B INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); social behavior (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); plasma membrane (ortholog) 7 24633124 24703579 - 30032202 116906020 MODEL JAAIVD010000026;XM_032909070;XM_032909071;XM_032909073 XP_032764961;XP_032764962;XP_032764964 protein EFR3 homolog B protein-coding 625915600 Ltb4r leukotriene B4 receptor ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); leukotriene receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH Anaphylaxis (ortholog); arteriosclerosis (ortholog); carotid artery disease (ortholog) 12 69236319 69237384 - 22301074;30032202 116914016 MODEL JAAIVD010000007;XM_032918287 XP_032774178 leukotriene B4 receptor 1 protein-coding 625915604 Gpnmb glycoprotein nmb ENCODES a protein that exhibits heparin binding (ortholog); integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN cytoplasmic vesicle (ortholog); membrane (ortholog); plasma membrane (ortholog) 6 91921395 91944738 - 30032202 116903839 MODEL JAAIVD010000024;XM_032906555 XP_032762446 transmembrane glycoprotein NMB protein-coding 625915619 LOC116900485 olfactory receptor 140 5 71657748 71658656 - 22301074 116900485 MODEL JAAIVD010000023;XM_032902219 XP_032758110 protein-coding 625915622 LOC116893103 PWWP domain-containing DNA repair factor 3A-like 2 63154260 63155999 - 116893103 MODEL JAAIVD010000001 pseudo 625915623 LOC116894586 60S ribosomal protein L7a-like 2 180418131 180418942 - 116894586 MODEL JAAIVD010000001 pseudo 625915624 LOC116885021 ubiquitin-60S ribosomal protein L40-like 15 12162199 12162677 + 22301074;30032202 116885021 MODEL JAAIVD010000010;XM_032886263 XP_032742154 protein-coding 625915629 LOC116885283 uncharacterized protein C11orf98 homolog 16 2290552 2290957 + 116885283 MODEL JAAIVD010000004 pseudo 625915630 LOC116899978 zinc finger FYVE domain-containing protein 21-like 5 133875551 133877001 - 116899978 MODEL JAAIVD010000023 pseudo 625915631 Gar1 GAR1 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); dyskeratosis congenita (ortholog); hematopoietic system disease (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); chromosome, telomeric region (ortholog) 3 29472720 29479302 + 22301074;30032202 116896263 MODEL JAAIVD010000012;XM_032897339;XM_032897340 XP_032753230;XP_032753231 H/ACA ribonucleoprotein complex subunit 1 protein-coding 625915645 Agpat3 1-acylglycerol-3-phosphate O-acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); ASSOCIATED WITH intellectual disability (ortholog); neurodegenerative disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 18 1547035 1631082 - 30032202 116886862 MODEL JAAIVD010000013;XM_032888315;XM_032888316 XP_032744206;XP_032744207 1-acyl-sn-glycerol-3-phosphate acyltransferase gamma protein-coding 625915662 Rbm26 RNA binding motif protein 26 ASSOCIATED WITH anthracosis (ortholog) 12 19651416 19732381 + 22301074;30032202 116913620 MODEL JAAIVD010000007;XM_032917874;XM_032917875;XM_032917876;XM_032917877;XM_032917878;XM_032917879 XP_032773765;XP_032773766;XP_032773767;XP_032773768;XP_032773769;XP_032773770 RNA-binding protein 26 protein-coding 625915698 LOC116899865 small nucleolar RNA SNORA17 4 141245932 141246057 + 116899865 MODEL JAAIVD010000003;XR_004387859 snorna 625915701 LOC116909245 uncharacterized LOC116909245 9 14658626 14659822 - 116909245 MODEL JAAIVD010000002;XR_004389061 ncrna 625915705 Trmt44 tRNA methyltransferase 44 homolog 11 69503214 69521403 + 22301074;30032202 116912415 MODEL JAAIVD010000006;XM_032916481 XP_032772372 probable tRNA (uracil-O(2)-)-methyltransferase protein-coding 625915720 LOC116899965 ribosome biogenesis protein WDR12-like 5 91541370 91543765 + 116899965 MODEL JAAIVD010000023 pseudo 625915721 LOC116890304 U4 spliceosomal RNA 1 146536478 146536610 + 116890304 MODEL JAAIVD010000025 pseudo 625915722 Parg poly(ADP-ribose) glycohydrolase ENCODES a protein that exhibits chromatin binding (ortholog); poly(ADP-ribose) glycohydrolase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); detection of bacterium (ortholog); DNA damage response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH borna disease (ortholog); brain infarction (ortholog); Embryo Loss (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear body (ortholog) 13 7892380 8003750 + 22301074;30032202 116914405 MODEL JAAIVD010000008;XM_032918643;XM_032918644;XM_032918645 XP_032774534;XP_032774535;XP_032774536 protein-coding 625915750 Mlph melanophilin ENCODES a protein that exhibits actin binding (ortholog); microtubule plus-end binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN melanocyte differentiation (ortholog); melanosome localization (ortholog); pigmentation (ortholog); ASSOCIATED WITH alopecia (ortholog); genetic disease (ortholog); Griscelli syndrome type 3 (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); dendrite (ortholog) 4 162919614 162953907 + 22301074;30032202 116899631 MODEL JAAIVD010000003;XM_032901604 XP_032757495 protein-coding 625915770 LOC116915127 small nucleolar RNA SNORA17 13 63139912 63140047 + 116915127 MODEL JAAIVD010000008;XR_004389807 snorna 625915773 LOC116900484 olfactory receptor 4X2-like 5 71649570 71650499 + 116900484 MODEL JAAIVD010000023 pseudo 625915774 Spink8 serine peptidase inhibitor Kazal type 8 (putative) 8 100439169 100450552 + 22301074 116907476 MODEL JAAIVD010000027;XM_032910462 XP_032766353 serine protease inhibitor Kazal-type 8 protein-coding 625915784 LOC116893598 uncharacterized LOC116893598 2 3384775 3387376 - 116893598 MODEL JAAIVD010000001;XR_004386998 ncrna 625915788 LOC116893102 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61633487 61635951 - 116893102 MODEL JAAIVD010000001 pseudo 625915789 Cdh9 cadherin 9 ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); identical protein binding (ortholog); INVOLVED IN synapse assembly (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 3 164928194 165065318 - 22301074;30032202 116897112 MODEL JAAIVD010000012;XM_032898754 XP_032754645 cadherin-9 protein-coding 625915805 Popdc3 popeye domain cAMP effector 3 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 26 (ortholog); FOUND IN membrane (ortholog) 3 219173054 219201142 + 30032202 116895713 MODEL JAAIVD010000012;XM_032896900;XM_032896901 XP_032752791;XP_032752792 popeye domain containing 3;popeye domain-containing protein 3 protein-coding 625915817 Cd96 CD96 molecule INVOLVED IN cell-matrix adhesion (ortholog); negative regulation of natural killer cell cytokine production (ortholog); negative regulation of type II interferon production (ortholog); ASSOCIATED WITH C syndrome (ortholog); multiple sclerosis (ortholog); FOUND IN cytoplasm (ortholog) 4 30765863 30838968 - 30032202 116897890 MODEL JAAIVD010000003;XM_032899296 XP_032755187 T-cell surface protein tactile protein-coding 625915836 Pdap1 PDGFA associated protein 1 ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 16 8155584 8166098 + 30032202 116885663 MODEL JAAIVD010000004;XM_032886970 XP_032742861 28 kDa heat- and acid-stable phosphoprotein protein-coding 625915846 LOC116890015 tubulin alpha-1B chain-like 1 191217896 191219359 + 116890015 MODEL JAAIVD010000025 pseudo 625915847 LOC116897556 small nucleolar RNA SNORA17 3 115970600 115970731 + 116897556 MODEL JAAIVD010000012;XR_004387569 snorna 625915850 Calcoco2 calcium binding and coiled-coil domain 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of autophagosome maturation (ortholog); response to type II interferon (ortholog); xenophagy (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 58262523 58280342 + 30032202 116910324 MODEL JAAIVD010000002;XM_032914185 XP_032770076 calcium-binding and coiled-coil domain-containing protein 2 protein-coding 625915859 Serpind1 serpin family D member 1 ASSOCIATED WITH carotid artery thrombosis (ortholog); disease by infectious agent (ortholog); heparin cofactor II deficiency (ortholog) 4 2600385 2607140 + 22301074;30032202 116898636 MODEL JAAIVD010000003;XM_032899856 XP_032755747 heparin cofactor 2 protein-coding 625915867 Scn4a sodium voltage-gated channel alpha subunit 4 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN choline transport (ortholog); monoatomic cation transport (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 16 (ortholog); congenital myopathy (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 9 72774024 72805559 + 22301074;30032202 116908750 MODEL JAAIVD010000002;XM_032912103 XP_032767994 sodium channel protein type 4 subunit alpha protein-coding 625915894 Pkp2 plakophilin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); DNA binding (ortholog); intermediate filament binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cardiac muscle cell action potential (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 4 1477735 1548364 + 30032202 116898611 MODEL JAAIVD010000003;XM_032899809 XP_032755700 plakophilin-2 protein-coding 625915911 Nup214 nucleoporin 214 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); protein export from nucleus (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; mRNA nuclear export pathway; NXF1-NXT1 export pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); brain disease (ortholog); FOUND IN cytoplasmic side of nuclear pore (ortholog); nuclear envelope (ortholog) 5 3581444 3666070 - 22301074;30032202 116901159 MODEL JAAIVD010000023;XM_032902802;XM_032902803 XP_032758693;XP_032758694 nuclear pore complex protein Nup214 protein-coding 625915955 Nop58 NOP58 ribonucleoprotein ENCODES a protein that exhibits ATPase binding (ortholog); snoRNA binding (ortholog); TFIID-class transcription factor complex binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); snoRNA localization (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); Cajal body (ortholog); cytosol (ortholog) 5 6633122 6657868 - 30032202 116901201 MODEL JAAIVD010000023;XM_032902907;XM_032902908;XM_032902909 XP_032758798;XP_032758799;XP_032758800 nucleolar protein 58 protein-coding 625915982 LOC116893580 negative elongation factor D-like 2 226647098 226648599 - 116893580 MODEL JAAIVD010000001 pseudo 625915983 LOC116896074 AT-rich interactive domain-containing protein 4A-like 3 210741065 210742150 - 30032202 116896074 MODEL JAAIVD010000012;XM_032897056 XP_032752947 protein-coding 625915986 LOC116889760 kynurenine--oxoglutarate transaminase 1, mitochondrial 22301074;30032202;7796908 116889760 MODEL JAAIVD010000081;XM_032890622;Z49696 CAA89696;XP_032746513 kynurenine aminotransferase/glutamine transaminase K protein-coding 625915987 LOC116895737 proteasome subunit beta type-7-like 3 29832660 29876298 - 116895737 MODEL JAAIVD010000012 pseudo 625915988 LOC116902723 gliadoralin-A 6 16400689 16403602 - 116902723 MODEL JAAIVD010000024;XM_032905073;XM_032905074 XP_032760964;XP_032760965 protein-coding 625915998 LOC116911574 translationally-controlled tumor protein-like 10 13554232 13554674 - 116911574 MODEL JAAIVD010000005 pseudo 625915999 LOC116887540 uncharacterized LOC116887540 18 5336599 5337733 - 116887540 MODEL JAAIVD010000013;XM_032889171 XP_032745062 uncharacterized protein LOC116887540 protein-coding 625916004 Apbb2 amyloid beta precursor protein binding family B member 2 INVOLVED IN axon guidance (ortholog); extracellular matrix organization (ortholog); maintenance of lens transparency (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cognitive disorder (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 11 23421459 23739035 - 30032202 116912894 MODEL JAAIVD010000006;XM_032917153 XP_032773044 amyloid-beta A4 precursor protein-binding family B member 2 protein-coding 625916026 LOC116902746 uncharacterized LOC116902746 6 61075372 61092187 + 116902746 MODEL JAAIVD010000024;XR_004388235 ncrna 625916033 LOC116890137 cytochrome P450 11B3, mitochondrial 1 247618031 247624422 - 22301074;30032202 116890137 MODEL JAAIVD010000025;XM_032890873;XM_032890874 XP_032746764;XP_032746765 protein-coding 625916048 LOC116907658 60S ribosomal protein L13-like 8 100755369 100756335 + 116907658 MODEL JAAIVD010000027 pseudo 625916049 LOC116907434 olfactory receptor 18-like 8 15407871 15408824 + 22301074;30032202 116907434 MODEL JAAIVD010000027;XM_032910404 XP_032766295 protein-coding 625916053 LOC116900015 40S ribosomal protein S2-like 5 11058931 11060351 - 116900015 MODEL JAAIVD010000023 pseudo 625916054 Ech1 enoyl-CoA hydratase 1 ASSOCIATED WITH glucose intolerance (ortholog); Insulin Resistance (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN mitochondrion (ortholog) 2 167170420 167177304 - 30032202 116892374 MODEL JAAIVD010000001;XM_032894037 XP_032749928 delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial protein-coding 625916066 Tbcb tubulin folding cofactor B ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 165777056 165782900 + 22301074;30032202 116892329 MODEL JAAIVD010000001;XM_032893957 XP_032749848 tubulin-folding cofactor B protein-coding 625916076 Cpo carboxypeptidase O ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 4 137836279 137853007 + 22301074;30032202 116898522 MODEL JAAIVD010000003;XM_032899746 XP_032755637 protein-coding 625916087 Tmem176a transmembrane protein 176A INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) 6 92148064 92151832 - 22301074;30032202 116903844 MODEL JAAIVD010000024;XM_032906570 XP_032762461 protein-coding 625916098 E2f3 E2F transcription factor 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of fat cell proliferation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 48953675 49027254 - 22301074;30032202 116883324 MODEL JAAIVD010000009;XM_032884393;XM_032884394;XM_032884395 XP_032740284;XP_032740285;XP_032740286 transcription factor E2F3 protein-coding 625916116 Rcn2 reticulocalbin 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleolus (ortholog) 8 49966321 49983036 + 22301074;30032202 116906902 MODEL JAAIVD010000027;XM_032909815 XP_032765706 reticulocalbin-2 protein-coding 625916127 LOC116901004 arginine/serine-rich protein 1-like 5 110079803 110080381 - 116901004 MODEL JAAIVD010000023 pseudo 625916128 Tmem198 transmembrane protein 198 INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 4 148829731 148835930 + 30032202 116899538 MODEL JAAIVD010000003;XM_032901416;XM_032901417 XP_032757307;XP_032757308 protein-coding 625916140 LOC116908505 60S ribosomal protein L6-like 1 175248704 175250511 + 116908505 MODEL JAAIVD010000025 pseudo 625916141 Tnnt1 troponin T1, slow skeletal type ENCODES a protein that exhibits tropomyosin binding (ortholog); troponin T binding (ortholog); INVOLVED IN negative regulation of muscle contraction (ortholog); skeletal muscle contraction (ortholog); slow-twitch skeletal muscle fiber contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); myopathy (ortholog); FOUND IN troponin complex (ortholog) 2 177107609 177118535 - 22301074;30032202 116894539 MODEL JAAIVD010000001;XM_032896244;XM_032896245;XM_032896246;XM_032896247 XP_032752135;XP_032752136;XP_032752137;XP_032752138 troponin T, slow skeletal muscle protein-coding 625916170 Nlrc5 NLR family CARD domain containing 5 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); metabolic dysfunction and alcohol associated liver disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 1340776 1421031 + 22301074 116886580 MODEL JAAIVD010000011;XM_032888107 XP_032743998 protein NLRC5 protein-coding 625916223 LOC116910960 putative glutathione-specific gamma-glutamylcyclotransferase 2 10 83656832 83668989 - 116910960 MODEL JAAIVD010000005 pseudo 625916224 Iqcm IQ motif containing M 17 22948917 23314338 + 116886653 MODEL JAAIVD010000011;XM_032888149 XP_032744040 IQ domain-containing protein M protein-coding 625916242 Krt18 keratin 18 ENCODES a protein that exhibits scaffold protein binding (ortholog); INVOLVED IN cholangiocyte apoptotic process (ortholog); extrinsic apoptotic signaling pathway (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell periphery (ortholog); centriolar satellite (ortholog); cytoplasm (ortholog) 1 261045271 261048998 - 22301074;30032202 116883635 MODEL JAAIVD010000025;XM_032884827 XP_032740718 keratin, type I cytoskeletal 18 protein-coding 625916253 C5H20orf96 chromosome 5 C20orf96 homolog 5 131742029 131759720 + 116901042 MODEL JAAIVD010000023;XM_032902623 XP_032758514 uncharacterized protein C20orf96 homolog protein-coding 625916267 LOC116905580 ribosome biogenesis regulatory protein homolog 7 406071 408515 - 116905580 MODEL JAAIVD010000026 pseudo 625916268 LOC116883872 spermatogenesis-associated protein 1-like 1 207543349 207563539 - 116883872 MODEL JAAIVD010000025;XM_032885167 XP_032741058 protein-coding 625916278 LOC116910900 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45615729 45634383 - 22301074;30032202 116910900 MODEL JAAIVD010000005;XM_032914666 XP_032770557 protein-coding 625916289 Pik3c2b phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); lipid kinase activity (ortholog); INVOLVED IN autophagosome organization (ortholog); cellular response to starvation (ortholog); macroautophagy (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytosol (ortholog); endocytic vesicle (ortholog); nuclear membrane (ortholog) 10 2737311 2776931 - 22301074;30032202 116910869 MODEL JAAIVD010000005;XM_032914629 XP_032770520 phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit beta protein-coding 625916324 Nrf1 nuclear respiratory factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); mitochondrion organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bowen's Disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 109405485 109508134 - 30032202 116904005 MODEL JAAIVD010000024;XM_032906816;XM_032906817;XM_032906818;XM_032906819;XM_032906820 XP_032762707;XP_032762708;XP_032762709;XP_032762710;XP_032762711 protein-coding 625916348 LOC116902808 putative vomeronasal receptor-like protein 4 6 83784436 83785347 + 22301074;30032202 116902808 MODEL JAAIVD010000024;XM_032905141 XP_032761032 protein-coding 625916351 Jak3 Janus kinase 3 ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN altered Jak-Stat signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute megakaryocytic leukemia (ortholog); adenosine deaminase deficiency (ortholog); FOUND IN extrinsic component of cytoplasmic side of plasma membrane (ortholog) 13 13277803 13290206 - 22301074;30032202 116914270 MODEL JAAIVD010000008;XM_032918492 XP_032774383 tyrosine-protein kinase JAK3 protein-coding 625916379 Rbm12 RNA binding motif protein 12 ASSOCIATED WITH psychotic disorder (ortholog); schizophrenia 19 (ortholog); FOUND IN nucleoplasm (ortholog) 5 135457432 135474801 - 22301074;30032202 116902195 MODEL JAAIVD010000023;XM_032904561 XP_032760452 RNA-binding protein 12 protein-coding 625916386 LOC116898355 KAT8 regulatory NSL complex subunit 2-like 4 55323353 55324675 - 116898355 MODEL JAAIVD010000003 pseudo 625916387 LOC116895992 dipeptidyl peptidase 3-like 3 166767016 166792221 - 116895992 MODEL JAAIVD010000012 pseudo 625916388 LOC116915152 small nucleolar RNA SNORD19B 13 6715363 6715442 - 116915152 MODEL JAAIVD010000008;XR_004389820 snorna 625916391 Six4 SIX homeobox 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); fungiform papilla morphogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 87368527 87378098 - 22301074;30032202 116905769 MODEL JAAIVD010000026;XM_032908737 XP_032764628 homeobox protein SIX4 protein-coding 625916397 LOC116912721 transmembrane emp24 domain-containing protein 11 11 18555200 18580675 - 30032202 116912721 MODEL JAAIVD010000006;XM_032916854 XP_032772745 protein-coding 625916404 Tbpl2 TATA-box binding protein like 2 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN cytoplasm (ortholog); female germ cell nucleus (ortholog); nucleus (ortholog) 5 33770124 33791505 - 22301074;30032202 116900177 MODEL JAAIVD010000023;XM_032901933 XP_032757824 TATA box-binding protein-like protein 2 protein-coding 625916414 LOC116884909 protocadherin alpha-5-like 15 7407733 7410310 - 22301074 116884909 MODEL JAAIVD010000010;XM_032886131 XP_032742022 protein-coding 625916418 Glra3 glycine receptor alpha 3 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 13 32365513 32616856 + 22301074;30032202 116914493 MODEL JAAIVD010000008;XM_032918805;XM_032918806 XP_032774696;XP_032774697 glycine receptor subunit alpha-3 protein-coding 625916437 LOC116904676 small nucleolar RNA SNORA3/SNORA45 family 6 130465012 130465133 - 116904676 MODEL JAAIVD010000024;XR_004388373 snorna 625916440 Rundc1 RUN domain containing 1 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 9 60719234 60729211 + 116908579 MODEL JAAIVD010000002;XM_032911790;XM_032911791;XM_032911792;XM_032911793 XP_032767681;XP_032767682;XP_032767683;XP_032767684 RUN domain-containing protein 1 protein-coding 625916454 LOC116889523 small nucleolar RNA SNORA17 X 78552208 78552333 + 116889523 MODEL JAAIVD010000014;XR_004386465 snorna 625916457 Spaca1 sperm acrosome associated 1 INVOLVED IN acrosome assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 85 (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 1 108686595 108701789 + 22301074;30032202 116888883 MODEL JAAIVD010000025;XM_032890147;XM_032890154 XP_032746038;XP_032746045 sperm acrosome membrane-associated protein 1 protein-coding 625916470 LOC116888368 high mobility group protein B4-like X 108229796 108230301 + 30032202 116888368 MODEL JAAIVD010000014;XM_032889636 XP_032745527 protein-coding 625916473 Slc25a26 solute carrier family 25 member 26 ENCODES a protein that exhibits S-adenosyl-L-methionine transmembrane transporter activity (ortholog); S-adenosyl-L-methionine:S-adenosyl-L-homocysteine antiporter activity (ortholog); INVOLVED IN macromolecule methylation (ortholog); mitochondrial S-adenosyl-L-methionine transmembrane transport (ortholog); S-adenosyl-L-methionine transport (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 28 (ortholog); genetic disease (ortholog); Hypokalemic Periodic Paralysis, Type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 52363782 52458825 - 30032202 116904308 MODEL JAAIVD010000024;XM_032907224 XP_032763115 S-adenosylmethionine mitochondrial carrier protein protein-coding 625916486 LOC116898462 heat shock protein HSP 90-beta-like 4 103666511 103668152 + 116898462 MODEL JAAIVD010000003 pseudo 625916487 LOC116889345 gem-associated protein 8-like X 37322290 37323064 + 116889345 MODEL JAAIVD010000014 pseudo 625916488 P2rx6 purinergic receptor P2X 6 ENCODES a protein that exhibits extracellularly ATP-gated monoatomic cation channel activity (ortholog); protein-containing complex binding (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); dendritic spine (ortholog) 4 2814709 2824789 + 22301074;30032202 116898647 MODEL JAAIVD010000003;XM_032899874 XP_032755765 P2X purinoceptor 6 protein-coding 625916504 Gch1 GTP cyclohydrolase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); GTP cyclohydrolase I activity (ortholog); INVOLVED IN dihydrobiopterin metabolic process (ortholog); dopamine biosynthetic process (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia B (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 12 75861953 75897122 + 22301074;30032202 116913736 MODEL JAAIVD010000007;XM_032918040 XP_032773931 protein-coding 625916514 Neto2 neuropilin and tolloid like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) 17 14059539 14115258 + 22301074 116886093 MODEL JAAIVD010000011;XM_032887418 XP_032743309 neuropilin and tolloid-like protein 2 protein-coding 625916527 Lypd6 LY6/PLAUR domain containing 6 ENCODES a protein that exhibits acetylcholine receptor inhibitor activity (ortholog); acetylcholine receptor regulator activity (ortholog); INVOLVED IN hippocampal interneuron differentiation (ortholog); nervous system development (ortholog); neuron differentiation (ortholog); FOUND IN membrane (ortholog); neuron projection (ortholog) 5 27923868 28062058 + 30032202 116901398 MODEL JAAIVD010000023;XM_032903269;XM_032903270;XM_032903271;XM_032903272 XP_032759160;XP_032759161;XP_032759162;XP_032759163 ly6/PLAUR domain-containing protein 6 protein-coding 625916544 Gpr88 G protein-coupled receptor 88 ENCODES a protein that exhibits beta2-adrenergic receptor activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Childhood-Onset Chorea with Psychomotor Retardation (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); cytoplasm (ortholog) 3 43460234 43465141 + 22301074 116896335 MODEL JAAIVD010000012;XM_032897434;XM_032897435 XP_032753325;XP_032753326 probable G-protein coupled receptor 88 protein-coding 625916553 LOC116904618 olfactory receptor 6C74-like 6 30027755 30028687 + 22301074;30032202 116904618 MODEL JAAIVD010000024;XM_032907409 XP_032763300 protein-coding 625916556 Nudt13 nudix hydrolase 13 ENCODES a protein that exhibits NADH pyrophosphatase activity (ortholog); FOUND IN mitochondrion (ortholog) 12 90089334 90110624 + 22301074 116913730 MODEL JAAIVD010000007;XM_032918034;XM_032918035;XR_004389638 XP_032773925;XP_032773926 nucleoside diphosphate-linked moiety X motif 13 protein-coding 625916575 LOC116885946 paired immunoglobulin-like type 2 receptor beta 16 16136297 16139448 + 30032202 116885946 MODEL JAAIVD010000004;XM_032887263 XP_032743154 protein-coding 625916581 Osbp2 oxysterol binding protein 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); apical dendrite (ortholog) 11 72704923 72727332 - 30032202 116912022 MODEL JAAIVD010000006;XM_032915909 XP_032771800 oxysterol-binding protein 2 protein-coding 625916597 Ccdc90b coiled-coil domain containing 90B FOUND IN mitochondrion (ortholog) 2 108605097 108620060 - 30032202 116891848 MODEL JAAIVD010000001;XM_032893218 XP_032749109 coiled-coil domain-containing protein 90B, mitochondrial protein-coding 625916610 LOC116912615 peptidyl-prolyl cis-trans isomerase FKBP2-like 11 13116581 13118927 + 116912615 MODEL JAAIVD010000006 pseudo 625916611 LOC116912695 vomeronasal type-2 receptor 116-like 11 18781329 18782121 + 116912695 MODEL JAAIVD010000006 pseudo 625916612 Ing1 inhibitor of growth family member 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein import into nucleus (ortholog); regulation of programmed cell death (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) 13 72298088 72305513 - 30032202 116914620 MODEL JAAIVD010000008;XM_032918981;XM_032918983;XM_032918984 XP_032774872;XP_032774874;XP_032774875 inhibitor of growth protein 1 protein-coding 625916625 LOC116895208 TD and POZ domain-containing protein 3-like 3 5276379 5310077 - 116895208 MODEL JAAIVD010000012 pseudo 625916626 LOC116907345 ADP-sugar pyrophosphatase-like 8 33852622 33856408 - 116907345 MODEL JAAIVD010000027 pseudo 625916627 Adgrb3 adhesion G protein-coupled receptor B3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN maintenance of synapse structure (ortholog); motor learning (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 4 102373324 103091621 - 22301074;30032202 116899261 MODEL JAAIVD010000003;XM_032900877 XP_032756768 protein-coding 625916662 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28506644 28506716 + 116886024 MODEL JAAIVD010000004 trna 625916663 Gpsm1 G protein signaling modulator 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN negative regulation of GTPase activity (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); positive regulation of macroautophagy (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell cortex (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 5 10740404 10767067 - 22301074 116901275 MODEL JAAIVD010000023;XM_032903041;XM_032903042;XM_032903043;XM_032903044 XP_032758932;XP_032758933;XP_032758934;XP_032758935 G-protein-signaling modulator 1 protein-coding 625916690 Skor2 SKI family transcriptional corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum morphogenesis (ortholog); ASSOCIATED WITH Dysarthria (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 15 55164444 55197411 - 22301074;30032202 116884683 MODEL JAAIVD010000010;XM_032885863 XP_032741754 protein-coding 625916700 Erich2 glutamate rich 2 5 47828022 47862075 + 116901494 MODEL JAAIVD010000023;XM_032903461;XM_032903462 XP_032759352;XP_032759353 glutamate-rich protein 2 protein-coding 625916719 Gab1 GRB2 associated binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); endothelial cell chemotaxis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 26 (ortholog); Experimental Liver Cirrhosis (ortholog); Helicobacter Infections (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 17 19201705 19310560 + 116886098 MODEL JAAIVD010000011;XM_032887426;XM_032887427 XP_032743317;XP_032743318 GRB2-associated-binding protein 1 protein-coding 625916737 C10H1orf53 chromosome 10 C1orf53 homolog FOUND IN mitochondrion (ortholog) 10 19200181 19205349 - 116911599 MODEL JAAIVD010000005;XM_032915574 XP_032771465 uncharacterized protein C1orf53 homolog protein-coding 625916744 Kif9 kinesin family member 9 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); organelle disassembly (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN microtubule (ortholog); podosome (ortholog); sperm flagellum (ortholog) 8 101067756 101111079 + 22301074;30032202 116907747 MODEL JAAIVD010000027;XM_032910884;XM_032910885 XP_032766775;XP_032766776 kinesin-like protein KIF9 protein-coding 625916772 LOC116895070 small nucleolar RNA SNORA17 2 22309401 22309488 - 116895070 MODEL JAAIVD010000001 pseudo 625916773 LOC116912747 E3 ubiquitin-protein ligase RNF4-like 11 14745644 14746516 - 22301074;30032202 116912747 MODEL JAAIVD010000006;XM_032916895 XP_032772786 protein-coding 625916778 LOC116883707 40S ribosomal protein S7-like 14 54245115 54245668 - 116883707 MODEL JAAIVD010000009 pseudo 625916779 Cpsf3 cleavage and polyadenylation specific factor 3 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); metal ion binding (ortholog); RNA binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Neurodevelopmental Disorder with Hypotonia, Microcephaly, and Seizures (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, NYSTAGMUS, AND SEIZURES (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog) 7 37827254 37855298 + 30032202 116904905 MODEL JAAIVD010000026;XM_032907514 XP_032763405 cleavage and polyadenylation specificity factor subunit 3 protein-coding 625916801 LOC116884879 60S ribosomal protein L32-like 15 19314269 19321706 - 116884879 MODEL JAAIVD010000010 pseudo 625916802 Noc4l nucleolar complex associated 4 homolog FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 16 43692638 43697214 + 30032202 116885507 MODEL JAAIVD010000004;XM_032886799 XP_032742690 nucleolar complex protein 4 homolog protein-coding 625916821 Csnk1d casein kinase 1 delta ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); circadian regulation of gene expression (ortholog); Golgi organization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; ribosome biogenesis pathway; ASSOCIATED WITH advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 2 (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 63043319 63073617 + 22301074;30032202 116909838 MODEL JAAIVD010000002;XM_032913562 XP_032769453 casein kinase I protein-coding 625916834 Steap1 STEAP family member 1 ENCODES a protein that exhibits ferric-chelate reductase (NADPH) activity (ortholog); heme binding (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 6 137987463 137993935 - 30032202 116902989 MODEL JAAIVD010000024;XM_032905307 XP_032761198 metalloreductase STEAP1 protein-coding 625916842 Nceh1 neutral cholesterol ester hydrolase 1 ENCODES a protein that exhibits phosphate ion binding (ortholog); serine hydrolase activity (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); xenobiotic metabolic process (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); FOUND IN membrane (ortholog) 3 34245392 34310456 + 22301074 116896285 MODEL JAAIVD010000012;XM_032897366;XM_032897367 XP_032753257;XP_032753258 protein-coding 625916854 Gpr19 G protein-coupled receptor 19 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); FOUND IN cilium (ortholog); neuron projection (ortholog); plasma membrane (ortholog) 6 14544630 14571276 + 22301074;30032202 116903167 MODEL JAAIVD010000024;XM_032905535;XM_032905536;XM_032905537 XP_032761426;XP_032761427;XP_032761428 probable G-protein coupled receptor 19 protein-coding 625916867 Samd11 sterile alpha motif domain containing 11 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); PH domain binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); retinal rod cell development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN nucleus (ortholog); PRC1 complex (ortholog) 1 4403870 4421966 + 22301074;30032202 116891426 MODEL JAAIVD010000025;XM_032892479;XM_032892488;XR_004386835 XP_032748370;XP_032748379 sterile alpha motif domain-containing protein 11 protein-coding 625916890 Ift20 intraflagellar transport 20 ENCODES a protein that exhibits opsin binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); centrosome localization (ortholog); cilium assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); centriole (ortholog); centrosome (ortholog) 9 91900212 91905524 - 30032202 116909097 MODEL JAAIVD010000002;XM_032912568;XM_032912569 XP_032768459;XP_032768460 intraflagellar transport protein 20 homolog protein-coding 625916903 LOC116911688 contactin-associated protein like 5-4-like 10 81031108 81097665 - 30032202 116911688 MODEL JAAIVD010000005;XM_032915642;XR_004389334 XP_032771533 protein-coding 625916912 Brix1 biogenesis of ribosomes BRX1 FOUND IN chromosome (ortholog); nucleolus (ortholog) 3 170251611 170261218 + 22301074;30032202 116897125 MODEL JAAIVD010000012;XM_032898781 XP_032754672 ribosome biogenesis protein BRX1 homolog protein-coding 625916926 Znf446 zinc finger protein 446 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Dwarfism (ortholog); High Myopia (ortholog) 2 174204765 174218172 - 22301074 116892625 MODEL JAAIVD010000001;XM_032894439;XM_032894440;XM_032894441;XM_032894442;XM_032894443 XP_032750330;XP_032750331;XP_032750332;XP_032750333;XP_032750334 protein-coding 625916947 LOC116901382 low-density lipoprotein receptor-related protein 1B-like 5 20173768 20372769 + 22301074 116901382 MODEL JAAIVD010000023;XM_032903249 XP_032759140 protein-coding 625916967 Ncoa1 nuclear receptor coactivator 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); cellular response to Thyroglobulin triiodothyronine (ortholog); cerebellum development (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH breast carcinoma (ortholog); Breast Neoplasms (ortholog); endometrial carcinoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 24909012 25010790 - 22301074;30032202 116906026 MODEL JAAIVD010000026;XM_032909086;XM_032909087;XM_032909088;XM_032909089;XM_032909091 XP_032764977;XP_032764978;XP_032764979;XP_032764980;XP_032764982 protein-coding 625917002 Fkbp1b FKBP prolyl isomerase 1B ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); establishment of localization in cell (ortholog); insulin secretion (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN calcium channel complex (ortholog); cytoplasm (ortholog); membrane (ortholog) 7 25473656 25484228 - 22301074;30032202 116906288 MODEL JAAIVD010000026;XM_032909179;XM_032909180;XM_032909181;XM_032909182;XM_032909183 XP_032765070;XP_032765071;XP_032765072;XP_032765073;XP_032765074 peptidyl-prolyl cis-trans isomerase FKBP1B protein-coding 625917024 LOC116897435 glyceraldehyde-3-phosphate dehydrogenase-like 1 89887265 89902514 + 116897435 MODEL JAAIVD010000025 pseudo 625917025 LOC116904610 eukaryotic translation elongation factor 1 epsilon-1-like 6 25197700 25198218 - 116904610 MODEL JAAIVD010000024 pseudo 625917026 Pex13 peroxisomal biogenesis factor 13 ENCODES a protein that exhibits protein transmembrane transporter activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); cerebral cortex cell migration (ortholog); fatty acid alpha-oxidation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); genetic disease (ortholog); infantile Refsum disease (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 11 93298294 93316267 + 22301074;30032202 116912834 MODEL JAAIVD010000006;XM_032917021 XP_032772912 peroxisome biogenesis factor 13 protein-coding 625917034 LOC116889931 olfactory receptor 6C6-like 1 160989000 160989952 + 116889931 MODEL JAAIVD010000025 pseudo 625917035 Gng11 G protein subunit gamma 11 ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); lung adenocarcinoma (ortholog) 6 134604664 134609063 - 22301074;30032202 116902982 MODEL JAAIVD010000024;XM_032905300 XP_032761191 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-11 protein-coding 625917041 Rack1 receptor for activated C kinase 1 ENCODES a protein that exhibits BH3 domain binding (ortholog); cyclin binding (ortholog); cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; insulin-like growth factor signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH morphine dependence (ortholog); Mouth Neoplasms (ortholog); squamous cell carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 31400835 31406395 + 30032202 116909075 MODEL JAAIVD010000002;XM_032912548 XP_032768439 receptor of activated protein C kinase 1 protein-coding 625917053 Gal3st1 galactose-3-O-sulfotransferase 1 ENCODES a protein that exhibits galactosylceramide sulfotransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); galactosylceramide metabolic process (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH autism spectrum disorder (ortholog) 11 72985938 73001687 + 22301074;30032202 116912571 MODEL JAAIVD010000006;XM_032916686 XP_032772577 galactosylceramide sulfotransferase protein-coding 625917060 LOC116909244 putative lysozyme C-2 1 195390797 195398908 + 22301074;30032202 116909244 MODEL JAAIVD010000025;XM_032912765 XP_032768656 protein-coding 625917067 Vwa5b1 von Willebrand factor A domain containing 5B1 1 19600596 19642765 + 116893834 MODEL JAAIVD010000025;XM_032895554 XP_032751445 von Willebrand factor A domain-containing protein 5B1 protein-coding 625917091 Gnl2 G protein nucleolar 2 PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog) 1 33245592 33271150 - 22301074;30032202 116896807 MODEL JAAIVD010000025;XM_032898284 XP_032754175 nucleolar GTP-binding protein 2 protein-coding 625917111 Card9 caspase recruitment domain family member 9 ENCODES a protein that exhibits CARD domain binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); genetic disease (ortholog); IgA glomerulonephritis (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) 5 10727823 10736441 + 22301074;30032202 116901271 MODEL JAAIVD010000023;XM_032903036 XP_032758927 caspase recruitment domain-containing protein 9 protein-coding 625917128 LOC116895914 60S ribosome subunit biogenesis protein NIP7 homolog 3 120787837 120788453 + 116895914 MODEL JAAIVD010000012 pseudo 625917129 LOC116890035 ATP synthase subunit a-like 1 251789280 251789930 - 116890035 MODEL JAAIVD010000025 pseudo 625917130 Serpine1 serpin family E member 1 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to aldosterone (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; hypoxia inducible factor pathway; oxygen homeostasis pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acquired Protein C Deficiency (ortholog); Acute Lung Injury (ortholog); FOUND IN chromaffin granule (ortholog); extracellular exosome (ortholog); extracellular matrix (ortholog) 16 16947758 16958217 + 30032202 116885785 MODEL JAAIVD010000004;XM_032887116 XP_032743007 plasminogen activator inhibitor 1 protein-coding 625917143 LOC116913794 uncharacterized LOC116913794 12 67480446 67488952 - 116913794 MODEL JAAIVD010000007;XR_004389642 ncrna 625917148 Rhou ras homolog family member U ENCODES a protein that exhibits GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); G1/S transition of mitotic cell cycle (ortholog); FOUND IN focal adhesion (ortholog) 17 43198715 43208723 + 22301074;30032202 116886257 MODEL JAAIVD010000011;XM_032887677 XP_032743568 rho-related GTP-binding protein RhoU protein-coding 625917155 LOC116894989 small nucleolar RNA SNORA19 2 141785252 141785384 + 116894989 MODEL JAAIVD010000001;XR_004387180 snorna 625917158 Tmem202 transmembrane protein 202 8 53351062 53376840 - 30032202 116906710 MODEL JAAIVD010000027;XM_032909516;XM_032909517 XP_032765407;XP_032765408 protein-coding 625917173 Krt82 keratin 82 FOUND IN keratin filament (ortholog) 1 261519642 261529800 + 22301074;30032202 116883700 MODEL JAAIVD010000025;XM_032884917 XP_032740808 keratin, type II cuticular Hb2 protein-coding 625917184 LOC116912311 uncharacterized LOC116912311 11 29993884 30002579 + 116912311 MODEL JAAIVD010000006;XR_004389444 ncrna 625917189 Rheb Ras homolog, mTORC1 binding ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to nutrient levels (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN mTOR signaling pathway; Rheb mediated signaling pathway; ASSOCIATED WITH epilepsy (ortholog); Hemimegalencephaly (ortholog); intellectual disability (ortholog); FOUND IN dendrite (ortholog); endomembrane system (ortholog); glutamatergic synapse (ortholog) 6 153994337 154034854 - 22301074;30032202 116904216 MODEL JAAIVD010000024;XM_032907147 XP_032763038 GTP-binding protein Rheb protein-coding 625917201 Ppp1r15b protein phosphatase 1 regulatory subunit 15B ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN ER overload response (ortholog); negative regulation of protein phosphorylation (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); Microcephaly, Short Stature, and Impaired Glucose Metabolism 2 (ortholog); FOUND IN protein phosphatase type 1 complex (ortholog) 10 2706712 2711679 - 30032202 116911111 MODEL JAAIVD010000005;XM_032914951 XP_032770842 protein-coding 625917207 LOC116897947 olfactory receptor 5AC1-like 4 43083725 43084657 - 22301074;30032202 116897947 MODEL JAAIVD010000003;XM_032899346 XP_032755237 protein-coding 625917211 Smco2 single-pass membrane protein with coiled-coil domains 2 6 4521641 4543082 + 116902826 MODEL JAAIVD010000024;XM_032905156 XP_032761047 single-pass membrane and coiled-coil domain-containing protein 2 protein-coding 625917222 LOC116890527 60S ribosomal protein L23a-like 1 271791017 271791457 - 116890527 MODEL JAAIVD010000025 pseudo 625917223 Slc4a3 solute carrier family 4 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN bicarbonate transport (ortholog); cardiac conduction (ortholog); pH reduction (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); heart disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 148898439 148911436 + 22301074;30032202 116899541 MODEL JAAIVD010000003;XM_032901429 XP_032757320 anion exchange protein 3 protein-coding 625917250 LOC116889758 endonuclease G, mitochondrial-like 22301074;30032202 116889758 MODEL JAAIVD010000081;XM_032890620 XP_032746511 protein-coding 625917251 LOC116888165 cancer/testis antigen 55-like X 116854780 116870301 - 116888165 MODEL JAAIVD010000014;XM_032889488 XP_032745379 protein-coding 625917258 Fubp3 far upstream element binding protein 3 ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); intracellular mRNA localization (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); neuronal cell body (ortholog) 5 4010084 4056613 - 22301074;30032202 116901164 MODEL JAAIVD010000023;XM_032902811 XP_032758702 far upstream element-binding protein 3 protein-coding 625917281 LOC116884914 vegetative cell wall protein gp1-like 15 8098302 8099147 - 116884914 MODEL JAAIVD010000010;XM_032886138 XP_032742029 protein-coding 625917284 Slc16a2 solute carrier family 16 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid metabolic process (ortholog); hormone transport (ortholog); ASSOCIATED WITH Allan-Herndon-Dudley syndrome (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) X 66125023 66253731 - 22301074;30032202 116888501 MODEL JAAIVD010000014;XM_032889793 XP_032745684 monocarboxylate transporter 8 protein-coding 625917294 LOC116907339 olfactory receptor 8D2-like 8 32677802 32683995 + 116907339 MODEL JAAIVD010000027 pseudo 625917295 LOC116889819 putative elongin-A3 member C 116889819 MODEL JAAIVD010001099;XM_032890661 XP_032746552 protein-coding 625917296 LOC116886722 small nucleolar RNA SNORA5 17 1491654 1491790 - 116886722 MODEL JAAIVD010000011;XR_004386134 snorna 625917299 LOC116897128 39S ribosomal protein L40, mitochondrial-like 3 170241178 170241921 - 116897128 MODEL JAAIVD010000012 pseudo 625917300 LOC116887668 zinc finger protein 41-like 18 29322841 29324234 - 116887668 MODEL JAAIVD010000013 pseudo 625917301 Mogat1 monoacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 4 151708179 151734106 + 30032202 116898546 MODEL JAAIVD010000003;XM_032899759 XP_032755650 2-acylglycerol O-acyltransferase 1 protein-coding 625917311 Hrh1 histamine receptor H1 ENCODES a protein that exhibits histamine binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chemical synaptic transmission (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); atherosclerosis (ortholog); Extravasation of Diagnostic and Therapeutic Materials (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 6 32036807 32123141 - 22301074;30032202 116903393 MODEL JAAIVD010000024;XM_032905893;XM_032905894;XM_032905895 XP_032761784;XP_032761785;XP_032761786 histamine H1 receptor protein-coding 625917323 LOC116895516 translocon-associated protein subunit delta-like 3 116284595 116285135 + 116895516 MODEL JAAIVD010000012 pseudo 625917324 Ostm1 osteoclastogenesis associated transmembrane protein 1 INVOLVED IN osteoclast differentiation (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 5 (ortholog); genetic disease (ortholog); osteopetrosis (ortholog); FOUND IN chloride channel complex (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 18 42379421 42410164 + 30032202 116887223 MODEL JAAIVD010000013;XM_032888786 XP_032744677 osteopetrosis-associated transmembrane protein 1 protein-coding 625917334 LOC116897892 cofilin-1-like 4 31900132 31900634 + 116897892 MODEL JAAIVD010000003 pseudo 625917335 Pi16 peptidase inhibitor 16 INVOLVED IN negative regulation of cell growth involved in cardiac muscle cell development (ortholog); FOUND IN extracellular space (ortholog) 18 4542898 4551015 - 22301074;30032202 116887403 MODEL JAAIVD010000013;XM_032888995;XM_032888996 XP_032744886;XP_032744887 protein-coding 625917348 Mpg N-methylpurine DNA glycosylase ENCODES a protein that exhibits alkylbase DNA N-glycosylase activity (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 3651212 3657463 - 22301074;30032202 116908769 MODEL JAAIVD010000002;XM_032912133 XP_032768024 DNA-3-methyladenine glycosylase protein-coding 625917356 Cabcoco1 ciliary associated calcium binding coiled-coil 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) 18 18312253 18419095 + 116887274 MODEL JAAIVD010000013;XM_032888844;XM_032888846 XP_032744735;XP_032744737 ciliary-associated calcium-binding coiled-coil protein 1 protein-coding 625917370 Entr1 endosome associated trafficking regulator 1 INVOLVED IN endocytic recycling (ortholog); positive regulation of cilium assembly (ortholog); positive regulation of protein localization to cilium (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); early endosome (ortholog) 5 10700982 10707553 + 30032202 116901269 MODEL JAAIVD010000023;XM_032903027;XM_032903029;XM_032903030;XM_032903031;XM_032903032;XM_032903033 XP_032758918;XP_032758920;XP_032758921;XP_032758922;XP_032758923;XP_032758924 endosome-associated-trafficking regulator 1 protein-coding 625917390 LOC116914299 cytochrome P450 2D1 1 252143148 252147637 - 22301074;30032202 116914299 MODEL JAAIVD010000025;XM_032918544 XP_032774435 protein-coding 625917403 LOC116895293 calcium-activated chloride channel regulator 3A-1-like 3 15944984 15964870 + 22301074;30032202 116895293 MODEL JAAIVD010000012;XM_032896605 XP_032752496 protein-coding 625917421 Pinlyp phospholipase A2 inhibitor and LY6/PLAUR domain containing 2 170166332 170171775 + 22301074 116894489 MODEL JAAIVD010000001;XM_032896199 XP_032752090 phospholipase A2 inhibitor and Ly6/PLAUR domain-containing protein protein-coding 625917430 LOC116889296 60S ribosomal protein L17-like 1 129663228 129663798 + 116889296 MODEL JAAIVD010000025 pseudo 625917431 LOC116901831 40S ribosomal protein S25-like 5 98462816 98463220 - 30032202 116901831 MODEL JAAIVD010000023;XM_032903995 XP_032759886 protein-coding 625917436 Tspan32 tetraspanin 32 INVOLVED IN blood coagulation (ortholog); cytoskeleton organization (ortholog); defense response to protozoan (ortholog); FOUND IN cell surface (ortholog); integrin alphaIIb-beta3 complex (ortholog) 2 6683030 6696707 - 22301074 116890742 MODEL JAAIVD010000001;XM_032891199 XP_032747090 tetraspanin-32 protein-coding 625917448 Usp4 ubiquitin specific peptidase 4 ENCODES a protein that exhibits adenosine receptor binding (ortholog); cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); cellular response to starvation (ortholog); cytoplasmic translation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 99678118 99720728 + 22301074 116907585 MODEL JAAIVD010000027;XM_032910624 XP_032766515 ubiquitin carboxyl-terminal hydrolase 4 protein-coding 625917474 LOC116894610 vomeronasal type-2 receptor 116-like 2 184955441 184970858 + 22301074;30032202 116894610 MODEL JAAIVD010000001;XM_032896326 XP_032752217 protein-coding 625917483 Anxa11 annexin A11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cytokinetic process (ortholog); phagocytosis (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 23 (ortholog); genetic disease (ortholog); FOUND IN azurophil granule (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 1955954 2000486 + 22301074;30032202 116914432 MODEL JAAIVD010000008;XM_032918730 XP_032774621 protein-coding 625917502 Pigg phosphatidylinositol glycan anchor biosynthesis class G (EMM blood group) ENCODES a protein that exhibits CP2 mannose-ethanolamine phosphotransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 18098593 18125247 + 22301074;30032202 116912247 MODEL JAAIVD010000006;XM_032916229;XM_032916230;XR_004389436 XP_032772120;XP_032772121 GPI ethanolamine phosphate transferase 2 protein-coding 625917526 Exd2 exonuclease 3'-5' domain containing 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN DNA double-strand break processing (ortholog); double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 7 94680292 94714476 + 22301074;30032202 116905221 MODEL JAAIVD010000026;XM_032908034 XP_032763925 exonuclease 3'-5' domain-containing protein 2 protein-coding 625917539 Supv3l1 Suv3 like RNA helicase ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); DNA binding (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA recombination (ortholog); mitochondrial mRNA catabolic process (ortholog); mitochondrial mRNA surveillance (ortholog); ASSOCIATED WITH alopecia (ortholog); ichthyosis (ortholog); Sarcopenia (ortholog); FOUND IN mitochondrial degradosome (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 18 28257599 28278105 - 22301074;30032202 116887142 MODEL JAAIVD010000013;XM_032888691;XM_032888692 XP_032744582;XP_032744583 ATP-dependent RNA helicase SUPV3L1, mitochondrial protein-coding 625917561 Rag1 recombination activating 1 ENCODES a protein that exhibits endonuclease activity (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); B cell differentiation (ortholog); negative regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Alpha/Beta T-Cell Lymphopenia with Gamma/Delta T-Cell Expansion, Severe Cytomegalovirus Infection, and Autoimmunity (ortholog); cataract 3 multiple types (ortholog); FOUND IN nucleus (ortholog) 5 79469849 79481046 - 22301074;30032202 116900514 MODEL EU814874;EU814875;EU814880;EU814881;JAAIVD010000023;XM_032902243 ACN62930;ACN62931;ACN62935;ACN62936;XP_032758134 V(D)J recombination-activating protein 1 protein-coding 625917567 LOC116902014 inhibitor of growth protein 5-like 5 115381972 115383509 + 116902014 MODEL JAAIVD010000023 pseudo 625917568 Foxf1 forkhead box F1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood vessel development (ortholog); cardiac left ventricle morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 17 40734186 40737957 + 30032202 116886272 MODEL JAAIVD010000011;XM_032887696 XP_032743587 forkhead box protein F1 protein-coding 625917573 LOC116912158 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 11 15602902 15603311 + 116912158 MODEL JAAIVD010000006 pseudo 625917574 Nt5c1a 5'-nucleotidase, cytosolic IA ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); AMP catabolic process (ortholog); FOUND IN cytosol (ortholog) 1 35048642 35063764 - 22301074;30032202 116897039 MODEL JAAIVD010000025;XM_032898663;XM_032898669 XP_032754554;XP_032754560 cytosolic 5'-nucleotidase 1A protein-coding 625917587 Tmc3 transmembrane channel like 3 ASSOCIATED WITH colorectal cancer (ortholog) 2 116706900 116745029 - 30032202 116894263 MODEL JAAIVD010000001;XM_032895968;XM_032895969 XP_032751859;XP_032751860 transmembrane channel-like protein 3 protein-coding 625917614 LOC116889880 vomeronasal type-2 receptor 116-like 1 156493578 156513236 + 22301074;30032202 116889880 MODEL JAAIVD010000025;XM_032890704 XP_032746595 protein-coding 625917623 LOC116887369 olfactory receptor 2B11-like 18 11023421 11024360 + 22301074 116887369 MODEL JAAIVD010000013;XM_032888964 XP_032744855 protein-coding 625917626 Defb126 defensin beta 126 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); FOUND IN cell surface (ortholog); sperm glycocalyx (ortholog) 5 131808446 131812649 - 22301074 116900695 MODEL JAAIVD010000023;XM_032902398 XP_032758289 beta-defensin 126 protein-coding 625917632 LOC116894732 small ubiquitin-related modifier 1-like 2 75331637 75333634 - 30032202 116894732 MODEL JAAIVD010000001;XM_032896419 XP_032752310 protein-coding 625917637 C1qb complement C1q B chain ENCODES a protein that exhibits identical protein binding (ortholog); IgG binding (ortholog); IgM binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); inner ear development (ortholog); response to glucocorticoid (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); C1q Deficiency (ortholog); C1q Deficiency 2 (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) 1 21345523 21351157 + 22301074 116894206 MODEL JAAIVD010000025;XM_032895922 XP_032751813 complement C1q subcomponent subunit B protein-coding 625917644 Pdlim5 PDZ and LIM domain 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Crohn's disease (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 18429282 18590256 + 30032202 116896199 MODEL JAAIVD010000012;XM_032897247 XP_032753138 PDZ and LIM domain protein 5 protein-coding 625917661 Cfap97 cilia and flagella associated protein 97 ASSOCIATED WITH dilated cardiomyopathy (ortholog) 13 41719670 41751237 - 30032202 116914436 MODEL JAAIVD010000008;XM_032918734;XM_032918735;XM_032918736 XP_032774625;XP_032774626;XP_032774627 cilia- and flagella-associated protein 97 protein-coding 625917676 Smim11 small integral membrane protein 11 4 52310197 52316946 - 116898981 MODEL JAAIVD010000003;XM_032900407 XP_032756298 Smim11a small integral membrane protein 11A protein-coding 625917683 LOC116895931 TD and POZ domain-containing protein 1-like 3 125846005 125847085 - 116895931 MODEL JAAIVD010000012 pseudo 625917684 LOC116909018 C-C motif chemokine 2 9 88432101 88433937 - 22301074;30032202 116909018 MODEL JAAIVD010000002;XM_032912494 XP_032768385 protein-coding 625917691 Blm BLM RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); ATP binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); PARTICIPATES IN DNA replication pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Bloom syndrome (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 119706569 119793515 + 22301074;30032202 116891914 MODEL JAAIVD010000001;XM_032893338 XP_032749229 Bloom syndrome protein protein-coding 625917717 LOC116909228 DNA repair endonuclease XPF-like 9 9221673 9236873 - 30032202 116909228 MODEL JAAIVD010000002;XM_032912731 XP_032768622 protein-coding 625917726 LOC116885572 replication protein A 14 kDa subunit-like 16 43591067 43591433 - 116885572 MODEL JAAIVD010000004 pseudo 625917727 Map3k21 mitogen-activated protein kinase kinase kinase 21 PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway 17 45429800 45463021 + 22301074;30032202 116886324 MODEL JAAIVD010000011;XM_032887771 XP_032743662 protein-coding 625917741 Mapk10 mitogen-activated protein kinase 10 ENCODES a protein that exhibits ATP binding (ortholog); JUN kinase activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); JNK cascade (ortholog); JUN phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FasL mediated signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); generalized epilepsy (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); mitochondrion (ortholog) 11 13027088 13297722 - 22301074;30032202 116911935 MODEL JAAIVD010000006;XM_032915826;XM_032915827;XM_032915828;XM_032915829 XP_032771717;XP_032771718;XP_032771719;XP_032771720 protein-coding 625917769 LOC116903707 zinc finger protein 431-like 6 7301661 7323276 - 30032202 116903707 MODEL JAAIVD010000024;XM_032906380 XP_032762271 protein-coding 625917777 Large2 LARGE xylosyl- and glucuronyltransferase 2 ENCODES a protein that exhibits dystroglycan binding (ortholog); glucuronosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog) 5 66502924 66513980 - 30032202 116901639 MODEL JAAIVD010000023;XM_032903728;XM_032903729;XM_032903730;XM_032903731;XM_032903732;XM_032903733;XM_032903734;XM_032903735;XM_032903736;XM_032903737;XM_032903738;XM_032903740 XP_032759619;XP_032759620;XP_032759621;XP_032759622;XP_032759623;XP_032759624;XP_032759625;XP_032759626;XP_032759627;XP_032759628;XP_032759629;XP_032759631 protein-coding 625917820 LOC116889683 2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like 22301074;30032202 116889683 MODEL JAAIVD010000051;XM_032890572 XP_032746463 protein-coding 625917821 Dync2i2 dynein 2 intermediate chain 2 ENCODES a protein that exhibits dynein light chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); fundus dystrophy (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) 5 6685750 6701516 + 30032202 116901204 MODEL JAAIVD010000023;XM_032902913 XP_032758804 Wdr34 WD repeat domain 34;WD repeat-containing protein 34 protein-coding 625917834 Med31 mediator complex subunit 31 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN limb development (ortholog); negative regulation of fibroblast proliferation (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 9 43294549 43297993 + 22301074;30032202 116910231 MODEL JAAIVD010000002;XM_032914121 XP_032770012 mediator of RNA polymerase II transcription subunit 31 protein-coding 625917842 LOC116887880 olfactory receptor 13C7-like 1 2733883 2734296 + 22301074 116887880 MODEL JAAIVD010000025;XM_032889366 XP_032745257 protein-coding 625917845 LOC116884776 vesicle-associated membrane protein-associated protein A-like 15 40594108 40594910 + 30032202 116884776 MODEL JAAIVD010000010;XM_032886003 XP_032741894 protein-coding 625917850 Mgat4d MGAT4 family member D INVOLVED IN negative regulation of protein glycosylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi stack (ortholog) 17 16863779 16900313 - 30032202 116886528 MODEL JAAIVD010000011;XM_032888047 XP_032743938 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4D protein-coding 625917865 LOC116888707 mediator of RNA polymerase II transcription subunit 21-like X 63340651 63341261 + 116888707 MODEL JAAIVD010000014 pseudo 625917866 LOC116900318 olfactory receptor 1052-like 5 64294237 64295175 - 22301074;30032202 116900318 MODEL JAAIVD010000023;XM_032902075 XP_032757966 protein-coding 625917869 Ctdspl CTD small phosphatase like INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog) 8 110161354 110280713 + 22301074;30032202 116907900 MODEL JAAIVD010000027;XM_032911098;XM_032911099 XP_032766989;XP_032766990 CTD small phosphatase-like protein protein-coding 625917882 LOC116890342 U6 spliceosomal RNA 1 24394263 24394369 - 116890342 MODEL JAAIVD010000025;XR_004386564 snrna 625917885 Slc19a2 solute carrier family 19 member 2 ENCODES a protein that exhibits thiamine transmembrane transporter activity (ortholog); INVOLVED IN pyridoxine transport (ortholog); spermatogenesis (ortholog); thiamine diphosphate biosynthetic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH chronic kidney disease (ortholog); Deafness (ortholog); diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 10 43476513 43490647 + 22301074;30032202 116911085 MODEL JAAIVD010000005;XM_032914874;XM_032914875;XM_032914876 XP_032770765;XP_032770766;XP_032770767 thiamine transporter 1 protein-coding 625917904 LOC116900245 olfactory receptor 998-like 5 62969789 62970733 + 22301074;30032202 116900245 MODEL JAAIVD010000023;XM_032901996 XP_032757887 protein-coding 625917907 Chn1 chimerin 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); motor neuron axon guidance (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH autosomal dominant Robinow syndrome 2 (ortholog); Duane retraction syndrome (ortholog); Duane retraction syndrome 2 (ortholog) 5 50975852 51128819 - 22301074;30032202 116901523 MODEL JAAIVD010000023;XM_032903500;XM_032903501 XP_032759391;XP_032759392 N-chimaerin protein-coding 625917927 LOC116911758 gamma-aminobutyric acid receptor-associated protein-like 2 10 6466730 6467083 + 30032202 116911758 MODEL JAAIVD010000005;XM_032915752 XP_032771643 protein-coding 625917930 S1pr4 sphingosine-1-phosphate receptor 4 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); presynapse (ortholog) 1 153389258 153391160 + 22301074 116889856 MODEL JAAIVD010000025;XM_032890683 XP_032746574 sphingosine 1-phosphate receptor 4 protein-coding 625917935 Epha6 EPH receptor A6 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis 4 43482068 44375741 - 22301074;30032202 116898924 MODEL JAAIVD010000003;XM_032900334 XP_032756225 ephrin type-A receptor 6 protein-coding 625917957 Plekhh3 pleckstrin homology, MyTH4 and FERM domain containing H3 9 60460952 60469379 - 22301074 116910608 MODEL JAAIVD010000002;XM_032914550;XM_032914551;XM_032914552;XM_032914553;XR_004389165;XR_004389166;XR_004389167 XP_032770441;XP_032770442;XP_032770443;XP_032770444 pleckstrin homology domain-containing family H member 3 protein-coding 625917986 Bloc1s6 biogenesis of lysosomal organelles complex 1 subunit 6 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); adenosine metabolic process (ortholog); amino acid metabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cell-cell contact zone (ortholog); contractile ring (ortholog) 5 100827441 100838986 + 30032202 116901895 MODEL JAAIVD010000023;XM_032904105 XP_032759996 biogenesis of lysosome-related organelles complex 1 subunit 6 protein-coding 625917995 LOC116893738 adenosylhomocysteinase-like 2 19608301 19609563 + 116893738 MODEL JAAIVD010000001 pseudo 625917996 Aimp1 aminoacyl tRNA synthetase complex interacting multifunctional protein 1 ENCODES a protein that exhibits cytokine activity (ortholog); GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell-cell signaling (ortholog); defense response to virus (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 3 (ortholog); Muscle Hypotonia (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cell surface (ortholog); cytosol (ortholog) 3 26234648 26257431 + 22301074 116896238 MODEL JAAIVD010000012;XM_032897304 XP_032753195 aminoacyl tRNA synthase complex-interacting multifunctional protein 1 protein-coding 625918007 Taf15 TATA-box binding protein associated factor 15 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN gene expression (ortholog); mRNA stabilization (ortholog); RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH chondrosarcoma (ortholog); Disease Progression (ortholog); extraskeletal myxoid chondrosarcoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 87181635 87213298 - 22301074;30032202 116910627 MODEL JAAIVD010000002;XM_032914576 XP_032770467 TATA-binding protein-associated factor 2N protein-coding 625918027 LOC116904629 histone H1oo ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); structural constituent of chromatin (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); FOUND IN female germ cell nucleus (ortholog); nucleolus (ortholog); nucleus (ortholog) 6 30780568 30785635 - 22301074 116904629 MODEL JAAIVD010000024;XM_032907421 XP_032763312 protein-coding 625918036 Klhdc2 kelch domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) 7 82958556 82973142 + 22301074 116905119 MODEL JAAIVD010000026;XM_032907858 XP_032763749 kelch domain-containing protein 2 protein-coding 625918053 Ripk1 receptor interacting serine/threonine kinase 1 ENCODES a protein that exhibits death domain binding (ortholog); death receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Autoinflammation with Episodic Fever and Lymphadenopathy (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN death-inducing signaling complex (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 14 52581837 52608497 + 22301074;30032202 116883309 MODEL JAAIVD010000009;XM_032884363 XP_032740254 receptor-interacting serine/threonine-protein kinase 1 protein-coding 625918067 Lamp2 lysosomal associated membrane protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ion channel inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; chaperone mediated autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); cardiomyopathy (ortholog); cholestasis (ortholog); FOUND IN autolysosome (ortholog); autophagosome membrane (ortholog); chaperone-mediated autophagy translocation complex (ortholog) X 101913626 101950698 + 22301074;30032202 116888115 MODEL JAAIVD010000014;XM_032889469 XP_032745360 lysosome-associated membrane glycoprotein 2 protein-coding 625918079 LOC116910256 WW domain-binding protein 11-like 9 31595838 31610333 - 116910256 MODEL JAAIVD010000002 pseudo 625918080 Sgcd sarcoglycan delta INVOLVED IN calcium ion homeostasis (ortholog); calcium-mediated signaling (ortholog); cardiac muscle cell contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2F (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) 9 29741278 30652881 - 22301074;30032202 116908647 MODEL JAAIVD010000002;XM_032911912;XM_032911913 XP_032767803;XP_032767804 delta-sarcoglycan protein-coding 625918096 Cav3 caveolin 3 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium channel regulator activity (ortholog); connexin binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); caveola assembly (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Chromosome 3, Monosomy 3p25 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dystrophin-associated glycoprotein complex (ortholog) 6 34046365 34062023 - 22301074;30032202 116904639 MODEL JAAIVD010000024;XM_032907432 XP_032763323 caveolin-3 protein-coding 625918102 Znf521 zinc finger protein 521 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN neuron fate commitment (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 29809889 30092711 + 30032202 116884611 MODEL JAAIVD010000010;XM_032885752 XP_032741643 protein-coding 625918114 Ube2o ubiquitin conjugating enzyme E2 O ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of BMP signaling pathway (ortholog); protein K63-linked ubiquitination (ortholog); protein monoubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 67489451 67540228 + 116910343 MODEL JAAIVD010000002;XM_032914199 XP_032770090 (E3-independent) E2 ubiquitin-conjugating enzyme protein-coding 625918136 Nfkb2 nuclear factor kappa B subunit 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); extracellular matrix organization (ortholog); follicular dendritic cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH atrophic gastritis (ortholog); Cerebral Hemorrhage (ortholog); common variable immunodeficiency (ortholog); FOUND IN Bcl3/NF-kappaB2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 45766326 45773637 + 22301074;30032202 116891244 MODEL JAAIVD010000001;XM_032892120 XP_032748011 nuclear factor NF-kappa-B p100 subunit protein-coding 625918163 LOC116904111 heterogeneous nuclear ribonucleoproteins A2/B1-like 6 135503430 135504353 + 22301074 116904111 MODEL JAAIVD010000024;XM_032906989 XP_032762880 protein-coding 625918169 LOC116910096 CMRF-35-like molecule 4 9 69144582 69148792 - 30032202 116910096 MODEL JAAIVD010000002;XM_032913919 XP_032769810 protein-coding 625918176 LOC116903977 aldo-keto reductase family 1 member B7-like 6 105261808 105277268 - 30032202 116903977 MODEL JAAIVD010000024;XM_032906785;XR_004388318;XR_004388319 XP_032762676 protein-coding 625918196 LOC116894968 small nucleolar RNA SNORA36 family 2 228282011 228282142 + 116894968 MODEL JAAIVD010000001;XR_004387160 snorna 625918199 Fgf20 fibroblast growth factor 20 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor-receptor interaction (ortholog); INVOLVED IN cell differentiation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); inner ear auditory receptor cell differentiation (ortholog); ASSOCIATED WITH late onset Parkinson's disease (ortholog); Renal Hypodysplasia/Aplasia 2 (ortholog) 13 47202900 47210143 + 22301074;30032202 116914713 MODEL JAAIVD010000008;XM_032919144 XP_032775035 protein-coding 625918205 LOC116894336 mas-related G-protein coupled receptor member A 2 152176791 152198999 + 22301074;30032202 116894336 MODEL JAAIVD010000001;XM_032896028 XP_032751919 protein-coding 625918211 LOC116889602 transmembrane protein 106B-like Y 258599 260607 - 116889602 MODEL JAAIVD010000015 pseudo 625918212 LOC116911865 U2 spliceosomal RNA 10 85670575 85670663 + 116911865 MODEL JAAIVD010000005 pseudo 625918213 Slc23a1 solute carrier family 23 member 1 ENCODES a protein that exhibits dehydroascorbic acid transmembrane transporter activity (ortholog); L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN brain development (ortholog); dehydroascorbic acid transport (ortholog); L-ascorbic acid transmembrane transport (ortholog); ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); Intracranial Hemorrhages (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); brush border (ortholog) 15 8742773 8754154 + 22301074 116884318 MODEL JAAIVD010000010;XM_032885449 XP_032741340 protein-coding 625918231 LOC116900941 60S ribosomal protein L7-like 5 87278977 87279816 - 116900941 MODEL JAAIVD010000023 pseudo 625918232 Rpl9 ribosomal protein L9 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Sepsis (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 11 22408857 22411994 - 2227441;22301074;30032202 116912600 MODEL JAAIVD010000006;X51706;XM_032916723 CAA36002;XP_032772614 60S ribosomal protein L9 protein-coding 625918244 LOC116908520 ATP synthase subunit g, mitochondrial-like 9 48756751 48757042 - 116908520 MODEL JAAIVD010000002 pseudo 625918245 Letm1 leucine zipper and EF-hand containing transmembrane protein 1 ENCODES a protein that exhibits calcium:proton antiporter activity (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transport (ortholog); cristae formation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Developmental Disabilities (ortholog); Ependymomas (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 71057532 71100413 + 22301074;30032202 116912130 MODEL JAAIVD010000006;XM_032916040 XP_032771931 mitochondrial proton/calcium exchanger protein protein-coding 625918263 Bnc2 basonuclin zinc finger protein 2 ENCODES a protein that exhibits DNA binding (ortholog); rDNA binding (ortholog); INVOLVED IN endochondral bone growth (ortholog); mesenchyme development (ortholog); roof of mouth development (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cleft palate (ortholog); Congenital Lower Urinary Tract Obstruction (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) 1 69309004 69637630 + 30032202 116888107 MODEL JAAIVD010000025;XM_032889467;XM_032889470 XP_032745358;XP_032745361 basonuclin 2;zinc finger protein basonuclin-2 protein-coding 625918280 LOC116898305 6-phosphogluconate dehydrogenase, decarboxylating-like 4 31388227 31389727 - 116898305 MODEL JAAIVD010000003 pseudo 625918281 Nr0b1 nuclear receptor subfamily 0 group B member 1 ENCODES a protein that exhibits AF-2 domain binding (ortholog); DNA hairpin binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); endodermal cell differentiation (ortholog); gonad development (ortholog); ASSOCIATED WITH 46,XY sex reversal 2 (ortholog); genetic disease (ortholog); hypogonadism (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); membrane (ortholog) X 47318956 47323073 - 30032202 116889257 MODEL JAAIVD010000014;XM_032890404 XP_032746295 protein-coding 625918287 LOC116894285 macrophage migration inhibitory factor-like 2 127463744 127464158 + 116894285 MODEL JAAIVD010000001 pseudo 625918288 LOC116895445 heat shock protein HSP 90-beta-like 3 71233637 71235593 - 116895445 MODEL JAAIVD010000012 pseudo 625918289 Cfap210 cilia and flagella associated protein 210 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 5 47059291 47091886 - 116901486 MODEL JAAIVD010000023;XM_032903449 XP_032759340 Ccdc173 coiled-coil domain containing 173;coiled-coil domain-containing protein 173 protein-coding 625918302 LOC116913140 uncharacterized LOC116913140 12 56327349 56334584 - 116913140 MODEL JAAIVD010000007;XR_004389599 ncrna 625918307 LOC116889935 olfactory receptor 6C74-like 1 161123309 161124176 + 116889935 MODEL JAAIVD010000025 pseudo 625918308 Prkar2a protein kinase cAMP-dependent type II regulatory subunit alpha ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP-dependent protein kinase activity (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog) 8 100027065 100086822 + 22301074 116907614 MODEL JAAIVD010000027;XM_032910667 XP_032766558 cAMP-dependent protein kinase type II-alpha regulatory subunit protein-coding 625918323 LOC116897536 small nucleolar RNA SNORA48 3 74990322 74990464 - 116897536 MODEL JAAIVD010000012;XR_004387551 snorna 625918326 Trpc1 transient receptor potential cation channel subfamily C member 1 ENCODES a protein that exhibits ATPase binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); melanin biosynthetic process (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basolateral plasma membrane (ortholog); costamere (ortholog); cytoplasm (ortholog) 8 87162586 87206195 - 22301074;30032202 116907031 MODEL JAAIVD010000027;XM_032909973;XM_032909974;XM_032909976;XM_032909977;XM_032909978 XP_032765864;XP_032765865;XP_032765867;XP_032765868;XP_032765869 short transient receptor potential channel 1 protein-coding 625918353 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889667 MODEL JAAIVD010000045 trna 625918354 Serhl2 serine hydrolase like 2 FOUND IN cytoplasmic vesicle (ortholog) 1 252513177 252534738 + 116890079 MODEL JAAIVD010000025;XM_032890842 XP_032746733 serine hydrolase-like protein 2 protein-coding 625918369 Gipc3 GIPC PDZ domain containing family member 3 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 15 (ortholog); genetic disease (ortholog) 1 153549889 153554440 + 22301074 116904383 MODEL JAAIVD010000025;XM_032907253 XP_032763144 PDZ domain-containing protein GIPC3 protein-coding 625918378 Klhl32 kelch like family member 32 1 118612882 118828218 + 22301074 116902737 MODEL JAAIVD010000025;XM_032905088;XM_032905095;XM_032905100;XM_032905107 XP_032760979;XP_032760986;XP_032760991;XP_032760998 kelch-like protein 32 protein-coding 625918396 LOC116893132 nucleoside diphosphate kinase B-like 2 82225215 82360555 + 116893132 MODEL JAAIVD010000001 pseudo 625918397 M1ap meiosis 1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN female gamete generation (ortholog); male meiosis chromosome separation (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH CRYPTOZOOSPERMIA (ortholog); male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN cytoplasm (ortholog) 6 63194287 63275976 - 30032202 116902755 MODEL JAAIVD010000024;XM_032905101 XP_032760992 meiosis 1 arrest protein protein-coding 625918408 Zbed5 zinc finger BED-type containing 5 2 90332926 90338110 + 116893141 MODEL JAAIVD010000001;XM_032895067 XP_032750958 zinc finger BED domain-containing protein 5 protein-coding 625918413 Mrpl3 mitochondrial ribosomal protein L3 ASSOCIATED WITH brain disease (ortholog); combined oxidative phosphorylation deficiency 9 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 8 96353199 96375720 + 22301074;30032202 116907438 MODEL JAAIVD010000027;XM_032910407 XP_032766298 39S ribosomal protein L3, mitochondrial protein-coding 625918427 Pbx1 PBX homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); brain infarction (ortholog); Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 47422896 47731239 - 22301074;30032202 116911453 MODEL JAAIVD010000005;XM_032915420;XM_032915421;XM_032915422;XM_032915423 XP_032771311;XP_032771312;XP_032771313;XP_032771314 pre-B-cell leukemia transcription factor 1 protein-coding 625918449 LOC116903002 cadherin-related family member 3-like 6 146376897 146473132 + 22301074 116903002 MODEL JAAIVD010000024;XM_032905313 XP_032761204 protein-coding 625918472 Ryk receptor like tyrosine kinase ENCODES a protein that exhibits frizzled binding (ortholog); protein tyrosine kinase activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); chemorepulsion of dopaminergic neuron axon (ortholog); ASSOCIATED WITH cleft palate (ortholog); Craniofacial Abnormalities (ortholog); orofacial cleft 1 (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 8 94137109 94208250 + 22301074;30032202 116907371 MODEL JAAIVD010000027;XM_032910322;XM_032910323 XP_032766213;XP_032766214 tyrosine-protein kinase RYK protein-coding 625918493 LOC116908996 keratin, type I cuticular Ha4-like 9 54784125 54787795 - 22301074;30032202 116908996 MODEL JAAIVD010000002;XM_032912465 XP_032768356 protein-coding 625918503 LOC116888694 uncharacterized LOC116888694 X 16526767 16528387 - 116888694 MODEL JAAIVD010000014;XR_004386337;XR_004386338 ncrna 625918510 Atp6ap1l ATPase H+ transporting accessory protein 1 like ASSOCIATED WITH Breast Neoplasms (ortholog) 3 205325291 205352454 + 30032202 116897308 MODEL JAAIVD010000012;XM_032899057 XP_032754948 V-type proton ATPase subunit S1-like protein protein-coding 625918521 Mog myelin oligodendrocyte glycoprotein INVOLVED IN response to folic acid (ortholog); response to lipid (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); multiple sclerosis (ortholog); FOUND IN cell surface (ortholog) 18 10006632 10017905 - 30032202 116886943 MODEL JAAIVD010000013;XM_032888441 XP_032744332 myelin-oligodendrocyte glycoprotein protein-coding 625918533 LOC116893432 vomeronasal type-2 receptor 116-like 2 175662161 175688115 - 116893432 MODEL JAAIVD010000001 pseudo 625918534 Zfyve21 zinc finger FYVE-type containing 21 ASSOCIATED WITH coronary artery disease (ortholog) 7 129411914 129428639 + 22301074 116905502 MODEL JAAIVD010000026;XM_032908523;XM_032908524;XM_032908526;XM_032908527 XP_032764414;XP_032764415;XP_032764417;XP_032764418 zinc finger FYVE domain-containing protein 21 protein-coding 625918554 LOC116908705 ribosome biogenesis protein NSA2 homolog 9 78347552 78348299 - 116908705 MODEL JAAIVD010000002 pseudo 625918555 Acsbg1 acyl-CoA synthetase bubblegum family member 1 ENCODES a protein that exhibits long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN long-chain fatty acid biosynthetic process (ortholog); long-chain fatty acid metabolic process (ortholog); ovarian follicle atresia (ortholog); ASSOCIATED WITH adrenoleukodystrophy (ortholog); demyelinating disease (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 8 48672529 48729770 - 30032202 116908293 MODEL JAAIVD010000027;XM_032911556 XP_032767447 long-chain-fatty-acid--CoA ligase ACSBG1 protein-coding 625918573 Suv39h2 SUV39H2 histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Parakeratosis (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nucleus (ortholog) 14 9911302 9928870 - 22301074;30032202 116883289 MODEL JAAIVD010000009;XM_032884282;XM_032884284 XP_032740173;XP_032740175 histone-lysine N-methyltransferase SUV39H2;suppressor of variegation 3-9 homolog 2 protein-coding 625918586 LOC116912462 growth-regulated alpha protein 11 4315492 4317269 + 22301074;30032202 116912462 MODEL JAAIVD010000006;XM_032916528 XP_032772419 protein-coding 625918594 LOC116906170 WW domain-binding protein 11-like 7 101872937 101979761 - 30032202 116906170 MODEL JAAIVD010000026;XM_032909147 XP_032765038 protein-coding 625918599 LOC116908039 C-C chemokine receptor 1-like protein 1 8 115055102 115056220 - 22301074;30032202 116908039 MODEL JAAIVD010000027;XM_032911313 XP_032767204 protein-coding 625918603 LOC116892689 zinc finger protein 581-like 2 177632385 177634333 + 116892689 MODEL JAAIVD010000001 pseudo 625918604 Eme1 essential meiotic structure-specific endonuclease 1 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); FOUND IN chromatin (ortholog); endodeoxyribonuclease complex (ortholog); heterochromatin (ortholog) 9 50897836 50904349 + 22301074;30032202 116908833 MODEL JAAIVD010000002;XM_032912253 XP_032768144 crossover junction endonuclease EME1 protein-coding 625918616 Anhx anomalous homeobox 18 36177416 36194282 - 116886967 MODEL JAAIVD010000013;XM_032888462 XP_032744353 anomalous homeobox protein protein-coding 625918629 LOC116907138 anaphase-promoting complex subunit 15-like 8 47148815 47151866 + 116907138 MODEL JAAIVD010000027 pseudo 625918630 LOC116883608 elongin-B-like 14 22013411 22013797 - 22301074;30032202 116883608 MODEL JAAIVD010000009;XM_032884796 XP_032740687 protein-coding 625918634 LOC116913983 asparagine synthetase domain-containing protein 1-like 12 19866425 19868323 - 116913983 MODEL JAAIVD010000007 pseudo 625918635 Crls1 cardiolipin synthase 1 ENCODES a protein that exhibits cardiolipin synthase (CMP-forming) (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); response to phosphatidylethanolamine (ortholog); response to thyroxine (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 57 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 112556460 112575612 + 22301074;30032202 116902009 MODEL JAAIVD010000023;XM_032904276 XP_032760167 cardiolipin synthase (CMP-forming) protein-coding 625918646 LOC116912203 UDP-glucuronosyltransferase 2B2 11 1502619 1518997 + 22301074 116912203 MODEL JAAIVD010000006;XM_032916143;XM_032916144 XP_032772034;XP_032772035 protein-coding 625918661 LOC116893407 elongin-B-like 2 173350484 173362697 - 116893407 MODEL JAAIVD010000001 pseudo 625918662 Acad9 acyl-CoA dehydrogenase family member 9 ENCODES a protein that exhibits long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN long-chain fatty acid metabolic process (ortholog); medium-chain fatty acid metabolic process (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 20 (ortholog); FOUND IN dendrite (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 3 117857266 117880512 - 22301074;30032202 116896935 MODEL JAAIVD010000012;XM_032898503 XP_032754394 complex I assembly factor ACAD9, mitochondrial protein-coding 625918684 LOC116891037 ATP synthase F(0) complex subunit C2, mitochondrial 2 23126804 23127443 - 22301074;30032202 116891037 MODEL JAAIVD010000001;XM_032891719 XP_032747610 protein-coding 625918689 Tpd52l2 TPD52 like 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 5 158582229 158603080 + 30032202 116902443 MODEL JAAIVD010000023;XM_032904984;XM_032904986;XM_032904987;XM_032904988;XM_032904989;XM_032904990;XM_032904991;XM_032904992;XM_032904993 XP_032760875;XP_032760877;XP_032760878;XP_032760879;XP_032760880;XP_032760881;XP_032760882;XP_032760883;XP_032760884 tumor protein D54 protein-coding 625918720 LOC116900320 olfactory receptor 5AS1-like 5 64345625 64346563 - 22301074;30032202 116900320 MODEL JAAIVD010000023;XM_032902077 XP_032757968 protein-coding 625918723 LOC116890582 small nucleolar RNA SNORA17 1 218784685 218784810 + 116890582 MODEL JAAIVD010000025;XR_004386744 snorna 625918726 Vps29 VPS29 retromer complex component INVOLVED IN endocytic recycling (ortholog); regulation of autophagy (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN cytosol (ortholog); endosome (ortholog); retromer complex (ortholog) 16 31485932 31494833 - 22301074;30032202 116885807 MODEL JAAIVD010000004;XM_032887140;XM_032887141 XP_032743031;XP_032743032 vacuolar protein sorting-associated protein 29 protein-coding 625918738 Cdr1 cerebellar degeneration related 1 X 120854212 120856551 - 116888188 MODEL JAAIVD010000014;XM_032889501 XP_032745392 cerebellar degeneration related protein 1;cerebellar degeneration-related antigen 1 protein-coding 625918745 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 848688 848760 - 116910822 MODEL JAAIVD010000002 trna 625918746 LOC116894673 trace amine-associated receptor 7c-like 2 210088310 210089386 + 22301074;30032202 116894673 MODEL JAAIVD010000001;XM_032896375 XP_032752266 protein-coding 625918749 LOC116892788 vomeronasal type-2 receptor 116-like 2 185506733 185520044 + 22301074;30032202 116892788 MODEL JAAIVD010000001;XM_032894661 XP_032750552 protein-coding 625918758 LOC116900559 olfactory receptor 4K13-like 5 90033756 90034703 + 22301074 116900559 MODEL JAAIVD010000023;XM_032902284 XP_032758175 protein-coding 625918761 LOC116898013 putative glutathione-specific gamma-glutamylcyclotransferase 2 4 72687274 72687876 + 116898013 MODEL JAAIVD010000003 pseudo 625918762 Nrp1 neuropilin 1 ENCODES a protein that exhibits growth factor binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); diabetic retinopathy (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytosol (ortholog) 17 47855749 48002365 + 22301074 116886081 MODEL JAAIVD010000011;XM_032887401 XP_032743292 neuropilin-1 protein-coding 625918783 Rit1 Ras like without CAAX 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH brain disease (ortholog); cardiofaciocutaneous syndrome (ortholog); cherubism (ortholog); FOUND IN plasma membrane (ortholog) 3 64827655 64841924 - 22301074;30032202 116896675 MODEL JAAIVD010000012;XM_032898046;XM_032898047;XM_032898048;XM_032898049 XP_032753937;XP_032753938;XP_032753939;XP_032753940 GTP-binding protein Rit1 protein-coding 625918799 LOC116888287 claudin-34-like X 37481925 37482551 + 30032202 116888287 MODEL JAAIVD010000014;XM_032889563 XP_032745454 protein-coding 625918802 LOC116912226 eukaryotic initiation factor 4A-I-like 11 60526057 60527279 - 22301074;30032202 116912226 MODEL JAAIVD010000006;XM_032916185 XP_032772076 protein-coding 625918806 LOC116896092 ADP/ATP translocase 2-like 3 218572087 218573761 + 116896092 MODEL JAAIVD010000012 pseudo 625918807 LOC116901007 choline/ethanolamine kinase-like 5 111910444 111911407 - 116901007 MODEL JAAIVD010000023 pseudo 625918808 Srrm1 serine and arginine repetitive matrix 1 PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH gestational diabetes (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); spliceosomal complex (ortholog) 1 22864229 22896343 + 22301074;30032202 116894554 MODEL JAAIVD010000025;XM_032896267 XP_032752158 serine/arginine repetitive matrix protein 1 protein-coding 625918830 LOC116900474 olfactory receptor 4C12-like 5 71494553 71495466 - 22301074 116900474 MODEL JAAIVD010000023;XM_032902209 XP_032758100 protein-coding 625918834 LOC116894200 olfactory receptor 484-like 2 106285272 106286216 - 22301074;30032202 116894200 MODEL JAAIVD010000001;XM_032895913 XP_032751804 protein-coding 625918837 C1H12orf50 chromosome 1 C12orf50 homolog 1 178921703 178953274 + 22301074 116889999 MODEL JAAIVD010000025;XM_032890784;XM_032890785;XM_032890786 XP_032746675;XP_032746676;XP_032746677 uncharacterized protein C12orf50 homolog protein-coding 625918861 LOC116905823 40S ribosomal protein S18-like 7 18290765 18291201 + 116905823 MODEL JAAIVD010000026 pseudo 625918862 LOC116900889 olfactory receptor 4C6-like 5 70222723 70223640 + 22301074 116900889 MODEL JAAIVD010000023;XM_032902564 XP_032758455 protein-coding 625918865 LOC116906151 phospholipase A2-like 7 95236448 95243442 - 116906151 MODEL JAAIVD010000026 pseudo 625918866 LOC116910304 retinol dehydrogenase 7 1 206275117 206280177 - 22301074 116910304 MODEL JAAIVD010000025;XM_032914173 XP_032770064 protein-coding 625918874 LOC116885087 U6 spliceosomal RNA 15 40580093 40580191 + 116885087 MODEL JAAIVD010000010 pseudo 625918875 Mrpl30 mitochondrial ribosomal protein L30 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 4 114095835 114100841 + 22301074;30032202 116899306 MODEL JAAIVD010000003;XM_032900965 XP_032756856 39S ribosomal protein L30, mitochondrial protein-coding 625918883 LOC116889101 glyceraldehyde-3-phosphate dehydrogenase-like 1 120739614 120740616 + 116889101 MODEL JAAIVD010000025 pseudo 625918884 LOC116883219 60S ribosomal protein L29-like 14 47963145 47986851 - 116883219 MODEL JAAIVD010000009 pseudo 625918885 Exph5 exophilin 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN keratinocyte development (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH epidermolysis bullosa (ortholog); Epidermolysis Bullosa Simplex 4, Localized or Generalized Intermediate, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog) 8 47285726 47361493 + 22301074;30032202 116906882 MODEL JAAIVD010000027;XM_032909794;XM_032909795;XM_032909796 XP_032765685;XP_032765686;XP_032765687 exophilin-5 protein-coding 625918901 LOC116894391 keratin-associated protein 20-2-like 2 157133420 157133602 + 116894391 MODEL JAAIVD010000001;XM_032896098 XP_032751989 protein-coding 625918904 Bpgm bisphosphoglycerate mutase ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); defense response to protozoan (ortholog); erythrocyte development (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH familial erythrocytosis 8 (ortholog) 6 105146707 105170222 - 22301074;30032202 116903976 MODEL JAAIVD010000024;XM_032906783;XM_032906784 XP_032762674;XP_032762675 protein-coding 625918913 LOC116911307 complement factor H-related protein 2-like 10 20082199 20097131 - 116911307 MODEL JAAIVD010000005;XM_032915222 XP_032771113 protein-coding 625918922 LOC116894593 vomeronasal type-1 receptor 2-like 2 181406175 181407120 - 116894593 MODEL JAAIVD010000001 pseudo 625918923 Pbld phenazine biosynthesis like protein domain containing ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); maintenance of gastrointestinal epithelium (ortholog); ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN cytoplasm (ortholog) 18 23608372 23624520 - 22301074;30032202 116887278 MODEL JAAIVD010000013;XM_032888858 XP_032744749 phenazine biosynthesis-like domain-containing protein protein-coding 625918936 LOC116894937 small nucleolar RNA SNORD115 2 140310470 140310549 - 116894937 MODEL JAAIVD010000001;XR_004387135 snorna 625918939 LOC116889099 60S ribosomal protein L7-like X 114270255 114271000 - 116889099 MODEL JAAIVD010000014 pseudo 625918940 LOC116910254 olfactory receptor 6C76-like 1 161514316 161515211 + 22301074;30032202 116910254 MODEL JAAIVD010000025;XM_032914163 XP_032770054 protein-coding 625918943 Csdc2 cold shock domain containing C2 ENCODES a protein that exhibits RNA binding (ortholog); transcription factor binding (ortholog) 1 251674802 251688985 + 30032202 116914107 MODEL JAAIVD010000025;XM_032918410 XP_032774301 cold shock domain-containing protein C2 protein-coding 625918951 LOC116893089 glycine cleavage system H protein, mitochondrial-like 2 54970382 54974715 - 22301074;30032202 116893089 MODEL JAAIVD010000001;XM_032895032 XP_032750923 protein-coding 625918956 LOC116904130 uncharacterized LOC116904130 6 137762931 137767774 - 116904130 MODEL JAAIVD010000024;XR_004388330 ncrna 625918961 LOC116884087 small nucleolar RNA SNORA17 14 70718496 70718615 - 116884087 MODEL JAAIVD010000009 pseudo 625918962 LOC116889066 ralBP1-associated Eps domain-containing protein 2-like X 23724720 23795086 + 22301074;30032202 116889066 MODEL JAAIVD010000014;XM_032890250 XP_032746141 protein-coding 625918968 Cd72 CD72 molecule ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of B cell receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 3043540 3050598 + 30032202 116891099 MODEL JAAIVD010000025;XM_032891815 XP_032747706 B-cell differentiation antigen CD72 protein-coding 625918981 LOC116906166 ligand-dependent nuclear receptor-interacting factor 1-like 7 101590445 101704380 + 116906166 MODEL JAAIVD010000026 pseudo 625918982 Hif3a hypoxia inducible factor 3 subunit alpha ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); pulmonary hypertension (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 172016485 172042606 + 22301074;30032202 116892593 MODEL JAAIVD010000001;XM_032894373 XP_032750264 hypoxia-inducible factor 3-alpha protein-coding 625919001 Nol8 nucleolar protein 8 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein localization to nucleolus (ortholog); rRNA processing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 14 68624693 68649225 + 22301074;30032202 116883602 MODEL JAAIVD010000009;XM_032884784;XM_032884785;XM_032884786;XM_032884787 XP_032740675;XP_032740676;XP_032740677;XP_032740678 protein-coding 625919031 LOC116903990 uncharacterized LOC116903990 6 107348080 107481110 - 116903990 MODEL JAAIVD010000024;XR_004388320;XR_004388321 ncrna 625919039 Rpl10l ribosomal protein L10 like ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN male meiosis I (ortholog); ribosomal large subunit assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Intellectual Developmental Disorder with Dysmorphic Facies and Ptosis (ortholog); prostate cancer (ortholog); spermatogenic failure 4 (ortholog); FOUND IN cytosol (ortholog); cytosolic large ribosomal subunit (ortholog); endoplasmic reticulum (ortholog) 7 80037169 80038249 - 22301074;30032202 116905107 MODEL JAAIVD010000026;XM_032907844 XP_032763735 60S ribosomal protein L10-like protein-coding 625919044 LOC116910236 uncharacterized LOC116910236 9 12375985 12376557 + 116910236 MODEL JAAIVD010000002;XR_004389144 ncrna 625919048 LOC116892581 pregnancy-specific glycoprotein 22-like 2 171828748 171837433 + 30032202 116892581 MODEL JAAIVD010000001;XM_032894361 XP_032750252 protein-coding 625919056 LOC116887957 small nuclear ribonucleoprotein-associated protein N-like X 64686307 64687025 + 116887957 MODEL JAAIVD010000014 pseudo 625919057 LOC116885623 uncharacterized LOC116885623 16 4887075 4888950 + 116885623 MODEL JAAIVD010000004;XR_004386027 ncrna 625919061 LOC116906408 small nucleolar RNA SNORD113/SNORD114 family 7 5522924 5522990 - 116906408 MODEL JAAIVD010000026 pseudo 625919062 Ndnf neuron derived neurotrophic factor ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH endometriosis (ortholog); Hypogonadotropic Hypogonadism 25 with Anosmia (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); extracellular space (ortholog) 6 75907910 75945038 - 22301074;30032202 116903698 MODEL JAAIVD010000024;XM_032906372 XP_032762263 protein NDNF protein-coding 625919070 Itga7 integrin subunit alpha 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH arteriosclerosis (ortholog); cardiomyopathy (ortholog); Colonic Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); integrin alpha7-beta1 complex (ortholog) 1 156409255 156435812 + 22301074;30032202 116906626 MODEL JAAIVD010000025;XM_032909387;XM_032909396;XM_032909406;XM_032909415;XM_032909421 XP_032765278;XP_032765287;XP_032765297;XP_032765306;XP_032765312 integrin alpha-7 protein-coding 625919109 Ankrd24 ankyrin repeat domain 24 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); FOUND IN plasma membrane (ortholog); stereocilium (ortholog) 1 153241983 153260609 - 30032202 116906244 MODEL JAAIVD010000025;XM_032909165 XP_032765056 ankyrin repeat domain-containing protein 24 protein-coding 625919134 Tor4a torsin family 4 member A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 5 11990014 11992831 + 22301074;30032202 116901320 MODEL JAAIVD010000023;XM_032903133 XP_032759024 torsin-4A protein-coding 625919139 LOC116889749 serine/arginine-rich splicing factor 7-like 116889749 MODEL JAAIVD010000079 pseudo 625919140 Hhatl hedgehog acyltransferase like INVOLVED IN negative regulation of N-terminal protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 8 112943507 112950513 - 30032202 116907979 MODEL JAAIVD010000027;XM_032911220;XM_032911221;XM_032911222 XP_032767111;XP_032767112;XP_032767113 protein-cysteine N-palmitoyltransferase HHAT-like protein protein-coding 625919160 Tank TRAF family member associated NFKB activator ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) 5 39232504 39293517 + 30032202 116901444 MODEL JAAIVD010000023;XM_032903377;XM_032903378 XP_032759268;XP_032759269 TRAF family member-associated NF-kappa-B activator protein-coding 625919179 Gpatch3 G-patch domain containing 3 INVOLVED IN negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 24649406 24658857 - 22301074;30032202 116895129 MODEL JAAIVD010000025;XM_032896520 XP_032752411 G patch domain-containing protein 3 protein-coding 625919190 Atp1a1 ATPase Na+/K+ transporting subunit alpha 1 ENCODES a protein that exhibits ADP binding (ortholog); ankyrin binding (ortholog); ATP binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); Charcot-Marie-Tooth Disease Type 2A2 (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 3 56460063 56488145 + 22301074;30032202 116896459 MODEL JAAIVD010000012;XM_032897619 XP_032753510 sodium/potassium-transporting ATPase subunit alpha-1 protein-coding 625919217 LOC116894959 small nucleolar RNA SNORA65 2 179242996 179243125 - 116894959 MODEL JAAIVD010000001;XR_004387153 snorna 625919220 C5H20orf202 chromosome 5 C20orf202 homolog 5 131058788 131064214 - 116902110 MODEL JAAIVD010000023;XM_032904420 XP_032760311 uncharacterized protein C20orf202 homolog protein-coding 625919226 Pla2g2e phospholipase A2 group IIE ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipase A2 activity (ortholog); INVOLVED IN low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); FOUND IN extracellular region (ortholog) 1 19318201 19321691 - 22301074;30032202 116886526 MODEL JAAIVD010000025;XM_032888049 XP_032743940 group IIE secretory phospholipase A2 protein-coding 625919233 Cfap119 cilia and flagella associated protein 119 INVOLVED IN gene expression (ortholog); single fertilization (ortholog); sperm flagellum assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cytoplasm (ortholog) 2 74312230 74317390 + 116891467 MODEL JAAIVD010000001;XM_032892561 XP_032748452 Ccdc189 coiled-coil domain containing 189;coiled-coil domain-containing protein 189 protein-coding 625919246 LOC116899858 small nucleolar RNA SNORA17 4 111335979 111336101 + 116899858 MODEL JAAIVD010000003 pseudo 625919247 Aftph aftiphilin ENCODES a protein that exhibits clathrin binding (ortholog); FOUND IN AP-1 adaptor complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 11 88922688 88974928 - 30032202 116912857 MODEL JAAIVD010000006;XM_032917071 XP_032772962 protein-coding 625919261 Slc13a5 solute carrier family 13 member 5 ENCODES a protein that exhibits citrate transmembrane transporter activity (ortholog); identical protein binding (ortholog); organic acid:sodium symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); citrate transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 25 (ortholog); Developmental Disabilities (ortholog); generalized epilepsy (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 43245139 43269237 + 22301074;30032202 116910123 MODEL JAAIVD010000002;XM_032913957 XP_032769848 protein-coding 625919277 LOC116893427 vomeronasal type-2 receptor 116-like 2 175272005 175290527 - 116893427 MODEL JAAIVD010000001 pseudo 625919278 Dnai7 dynein axonemal intermediate chain 7 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); ASSOCIATED WITH lung cancer (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN axonemal dynein complex (ortholog); cilium (ortholog); cytoplasm (ortholog) 6 2935063 2972222 - 30032202 116903077 MODEL JAAIVD010000024;XM_032905395 XP_032761286 Casc1;Cfap94 cancer susceptibility 1;cilia and flagella associated protein 94;protein CASC1 protein-coding 625919298 Plpbp pyridoxal phosphate binding protein ASSOCIATED WITH early-onset vitamin B6-dependent epilepsy 1 (ortholog); genetic disease (ortholog); pyridoxine-dependent epilepsy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 13 59462768 59475557 - 22301074;30032202 116914621 MODEL JAAIVD010000008;XM_032918985 XP_032774876 pyridoxal phosphate homeostasis protein protein-coding 625919310 Arl8a ARF like GTPase 8A ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); spindle midzone (ortholog) 10 553836 562840 - 22301074;30032202 116911204 MODEL JAAIVD010000005;XM_032915079 XP_032770970 ADP ribosylation factor like GTPase 8A;ADP-ribosylation factor-like protein 8A protein-coding 625919321 Mthfd1 methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1 ENCODES a protein that exhibits formate-tetrahydrofolate ligase activity (ortholog); methenyltetrahydrofolate cyclohydrolase activity (ortholog); methylenetetrahydrofolate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate biosynthetic process (ortholog); folic acid metabolic process (ortholog); heart development (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; folate cycle metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); cleft palate (ortholog); Combined Immunodeficiency and Megaloblastic Anemia with or without Hyperhomocysteinemia (ortholog); FOUND IN cytosol (ortholog) 7 90415997 90482610 + 22301074;30032202 116905180 MODEL JAAIVD010000026;XM_032907964 XP_032763855 C-1-tetrahydrofolate synthase, cytoplasmic protein-coding 625919353 Jmjd1c jumonji domain containing 1C INVOLVED IN epithelial cell morphogenesis (ortholog); maintenance of cell number (ortholog); male germ-line stem cell population maintenance (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) 18 19565623 19695218 - 30032202 116887673 MODEL JAAIVD010000013;XM_032889267 XP_032745158 probable JmjC domain-containing histone demethylation protein 2C protein-coding 625919383 Igsf9 immunoglobulin superfamily member 9 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN dendrite development (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); regulation of synapse maturation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 10 51602520 51617302 + 22301074;30032202 116911051 MODEL JAAIVD010000005;XM_032914804 XP_032770695 protein turtle homolog A protein-coding 625919407 Fam107a family with sequence similarity 107 member A INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 12 78701274 78722316 - 30032202 116913653 MODEL JAAIVD010000007;XM_032917922;XM_032917923;XM_032917924 XP_032773813;XP_032773814;XP_032773815 actin-associated protein FAM107A protein-coding 625919421 Rhpn1 rhophilin Rho GTPase binding protein 1 INVOLVED IN focal adhesion assembly (ortholog); glomerular filtration (ortholog); kidney development (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) 1 248023649 248034566 + 22301074;30032202 116912825 MODEL JAAIVD010000025;XM_032917010 XP_032772901 rhophilin-1 protein-coding 625919440 LOC116900897 olfactory receptor 4A16-like 5 71327513 71328502 - 22301074 116900897 MODEL JAAIVD010000023;XM_032902569 XP_032758460 protein-coding 625919443 Plac1 placenta enriched 1 INVOLVED IN placenta development (ortholog); spongiotrophoblast layer developmental growth (ortholog) X 116135778 116176819 + 116889251 MODEL JAAIVD010000014;XM_032890402 XP_032746293 placenta-specific protein 1 protein-coding 625919450 Lif LIF interleukin 6 family cytokine ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); leukemia inhibitory factor receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); blood vessel remodeling (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Cardiomegaly (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog) 11 73242741 73252100 + 22301074;30032202 116912593 MODEL JAAIVD010000006;XM_032916713;XR_004389471 XP_032772604 leukemia inhibitory factor protein-coding 625919461 Senp1 SUMO specific peptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); SUMO-specific endopeptidase activity (ortholog); INVOLVED IN mRNA destabilization (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Neointima (ortholog); Primary Graft Dysfunction (ortholog); FOUND IN focal adhesion (ortholog); glutamatergic synapse (ortholog); nuclear membrane (ortholog) 1 270851896 270906130 - 30032202 116884624 MODEL JAAIVD010000025;XM_032885767;XM_032885774;XM_032885780;XM_032885790;XM_032885798;XM_032885807;XM_032885813;XM_032885821 XP_032741658;XP_032741665;XP_032741671;XP_032741681;XP_032741689;XP_032741698;XP_032741704;XP_032741712 sentrin-specific protease 1 protein-coding 625919499 LOC116891992 periphilin-1-like 2 14400974 14406418 - 30032202 116891992 MODEL JAAIVD010000001;XM_032893446 XP_032749337 protein-coding 625919503 Fbxl14 F-box and leucine rich repeat protein 14 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 6 27274926 27278248 - 22301074;30032202 116903341 MODEL JAAIVD010000024;XM_032905795;XM_032905797 XP_032761686;XP_032761688 F-box/LRR-repeat protein 14 protein-coding 625919512 Ppp1r3c protein phosphatase 1 regulatory subunit 3C ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); enzyme binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); regulation of glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); glycogen granule (ortholog) 2 37072510 37077774 + 30032202 116891138 MODEL JAAIVD010000001;XM_032891875 XP_032747766 protein-coding 625919518 Rab32 RAB32, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endosome to melanosome transport (ortholog); melanosome assembly (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN early endosome (ortholog); early endosome lumen (ortholog); endoplasmic reticulum (ortholog) 2 226591376 226607619 + 22301074;30032202 116893023 MODEL JAAIVD010000001;XM_032894984 XP_032750875 ras-related protein Rab-32 protein-coding 625919525 Ankrd13b ankyrin repeat domain 13B ENCODES a protein that exhibits ubiquitin-modified protein reader activity (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); late endosome (ortholog) 9 96141930 96160536 - 22301074;30032202 116908536 MODEL JAAIVD010000002;XM_032911727;XM_032911729;XM_032911730;XM_032911731 XP_032767618;XP_032767620;XP_032767621;XP_032767622 ankyrin repeat domain-containing protein 13B protein-coding 625919553 Lpcat4 lysophosphatidylcholine acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 90564635 90572784 + 30032202 116901739 MODEL JAAIVD010000023;XM_032903875 XP_032759766 lysophospholipid acyltransferase LPCAT4 protein-coding 625919571 LOC116906416 small nucleolar RNA SNORD53/SNORD92 7 21583617 21583705 - 116906416 MODEL JAAIVD010000026;XR_004388678 snorna 625919574 LOC116892695 uncharacterized LOC116892695 2 178013074 178026298 - 116892695 MODEL JAAIVD010000001;XR_004386963;XR_004386964;XR_004386965 ncrna 625919585 Asic2 acid sensing ion channel subunit 2 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to xenobiotic stimulus (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Inflammation (ortholog); prostate cancer (ortholog); FOUND IN dendritic spine (ortholog); membrane (ortholog); neuron projection (ortholog) 9 88499143 89558361 + 22301074;30032202 116909065 MODEL JAAIVD010000002;XM_032912542;XM_032912543 XP_032768433;XP_032768434 acid-sensing ion channel 2 protein-coding 625919602 LOC116892409 zinc finger protein 60-like 2 167951080 167972347 + 22301074 116892409 MODEL JAAIVD010000001;XM_032894088;XM_032894089 XP_032749979;XP_032749980 protein-coding 625919613 Itih5 inter-alpha-trypsin inhibitor heavy chain 5 INVOLVED IN uterus development (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 14 16246584 16345103 + 22301074 116883640 MODEL JAAIVD010000009;XM_032884829 XP_032740720 inter-alpha-trypsin inhibitor heavy chain H5 protein-coding 625919631 LOC116905694 transformer-2 protein homolog alpha-like 7 58378843 58379526 - 116905694 MODEL JAAIVD010000026 pseudo 625919632 LOC116895857 eukaryotic translation initiation factor 5-like 3 91940561 91959175 + 30032202 116895857 MODEL JAAIVD010000012;XM_032896962 XP_032752853 protein-coding 625919638 LOC116906309 U6 spliceosomal RNA 7 56794854 56794960 - 116906309 MODEL JAAIVD010000026;XR_004388597 snrna 625919641 Oard1 O-acyl-ADP-ribose deacylase 1 ENCODES a protein that exhibits ADP-ribosylglutamate hydrolase activity (ortholog); O-acetyl-ADP-ribose deacetylase activity (ortholog); purine nucleoside binding (ortholog); INVOLVED IN DNA damage response (ortholog); peptidyl-glutamate ADP-deribosylation (ortholog); protein de-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); site of DNA damage (ortholog) 4 81509705 81517220 - 30032202 116899068 MODEL JAAIVD010000003;XM_032900545;XM_032900546;XM_032900547;XM_032900548;XM_032900549;XM_032900550;XM_032900551 XP_032756436;XP_032756437;XP_032756438;XP_032756439;XP_032756440;XP_032756441;XP_032756442 ADP-ribose glycohydrolase OARD1 protein-coding 625919667 LOC116884860 protein SET-like 15 40192937 40199889 - 116884860 MODEL JAAIVD010000010 pseudo 625919668 LOC116911786 transmembrane epididymal protein 1 10 33319707 33320965 + 116911786 MODEL JAAIVD010000005;XM_032915781 XP_032771672 protein-coding 625919672 Pds5a PDS5 cohesin associated factor A INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); enteric nervous system development (ortholog); ASSOCIATED WITH Cornelia de Lange syndrome (ortholog); Neurodevelopmental Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 11 22661927 22753151 - 30032202 116912814 MODEL JAAIVD010000006;XM_032916982 XP_032772873 sister chromatid cohesion protein PDS5 homolog A protein-coding 625919707 LOC116898207 gamma-crystallin D 4 138953057 138954666 - 30032202 116898207 MODEL JAAIVD010000003;XM_032899566;XM_032899567 XP_032755457;XP_032755458 protein-coding 625919717 LOC116912361 vomeronasal type-2 receptor 116-like 11 19360067 19369691 + 22301074;30032202 116912361 MODEL JAAIVD010000006;XM_032916418;XM_032916419;XM_032916421 XP_032772309;XP_032772310;XP_032772312 protein-coding 625919730 LOC116905569 E3 ubiquitin-protein ligase RNF138-like 7 91778162 91784007 - 116905569 MODEL JAAIVD010000026 pseudo 625919731 Itgb3bp integrin subunit beta 3 binding protein INVOLVED IN negative regulation of epithelial cell apoptotic process (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH endometriosis (ortholog); intellectual disability (ortholog); FOUND IN inner kinetochore (ortholog); kinetochore (ortholog); nucleoplasm (ortholog) 1 54700414 54759248 + 22301074;30032202 116899809 MODEL JAAIVD010000025;XM_032901778;XM_032901779;XM_032901780 XP_032757669;XP_032757670;XP_032757671 centromere protein R protein-coding 625919750 LOC116884392 translation initiation factor IF-2-like 15 58291976 58293090 - 116884392 MODEL JAAIVD010000010;XM_032885500 XP_032741391 protein-coding 625919754 Rpusd2 RNA pseudouridine synthase domain containing 2 ENCODES a protein that exhibits pseudouridine synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog) 5 97207430 97212998 + 22301074 116901793 MODEL JAAIVD010000023;XM_032903947 XP_032759838 RNA pseudouridylate synthase domain-containing protein 2 protein-coding 625919761 Plxna1 plexin A1 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN dichotomous subdivision of terminal units involved in salivary gland branching (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH DWORSCHAK-PUNETHA NEURODEVELOPMENTAL SYNDROME (ortholog); epilepsy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 6 57017384 57058256 + 22301074;30032202 116903514 MODEL JAAIVD010000024;XM_032906119 XP_032762010 plexin-A1 protein-coding 625919796 Dusp18 dual specificity phosphatase 18 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); peptidyl-threonine dephosphorylation (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 72905677 72927454 + 22301074 116912070 MODEL JAAIVD010000006;XM_032915934;XM_032915935;XR_004389420;XR_004389421 XP_032771825;XP_032771826 dual specificity protein phosphatase 18 protein-coding 625919812 Eif3d eukaryotic translation initiation factor 3 subunit D ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) 10 82900650 82902226 + 22301074;30032202 116911771 MODEL JAAIVD010000005;XM_032915764 XP_032771655 protein-coding 625919815 Mcfd2 multiple coagulation factor deficiency 2, ER cargo receptor complex subunit INVOLVED IN carboxylic acid metabolic process (ortholog); gene expression (ortholog); ASSOCIATED WITH Factor V and Factor VIII, Combined Deficiency of, 2 (ortholog); Familial Multiple Coagulation Factor Deficiency I (ortholog); hemorrhagic disease (ortholog); FOUND IN extracellular region (ortholog) 7 5710038 5721777 + 22301074 116905750 MODEL JAAIVD010000026;XM_032908719 XP_032764610 multiple coagulation factor deficiency protein 2 protein-coding 625919823 Msi2 musashi RNA binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); poly(U) RNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN stem cell development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 82094498 82459708 + 22301074;30032202 116908744 MODEL JAAIVD010000002;XM_032912093;XM_032912094;XM_032912095 XP_032767984;XP_032767985;XP_032767986 RNA-binding protein Musashi homolog 2 protein-coding 625919849 Upk2 uroplakin 2 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH Hematuria (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog) 8 38997320 38998793 - 30032202 116907292 MODEL JAAIVD010000027;XM_032910242 XP_032766133 uroplakin-2 protein-coding 625919857 Meiosin meiosis initiator INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); meiotic cell cycle (ortholog); FOUND IN nucleus (ortholog) 2 171505839 171525772 + 22301074 116892551 MODEL JAAIVD010000001;XM_032894323;XM_032894324 XP_032750214;XP_032750215 Bhmg1 basic helix-loop-helix and HMG box domain-containing protein 1;basic helix-loop-helix and HMG-box containing 1 protein-coding 625919875 Pdp2 pyruvate dehyrogenase phosphatase catalytic subunit 2 ENCODES a protein that exhibits [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); response to starvation (ortholog); T-helper cell differentiation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); prostate cancer (ortholog); FOUND IN mitochondrion (ortholog) 17 12862061 12867575 + 22301074;30032202 116886417 MODEL JAAIVD010000011;XM_032887897;XM_032887898 XP_032743788;XP_032743789 pyruvate dehydrogenase [acetyl-transferring]-phosphatase 2, mitochondrial protein-coding 625919883 Ldlrad1 low density lipoprotein receptor class A domain containing 1 1 47592679 47601549 - 22301074 116890663 MODEL JAAIVD010000025;XM_032891103 XP_032746994 low-density lipoprotein receptor class A domain-containing protein 1 protein-coding 625919892 LOC116910885 SLC35A4 upstream open reading frame protein-like 10 85169241 85169552 + 116910885 MODEL JAAIVD010000005;XM_032914657 XP_032770548 protein-coding 625919895 LOC116902715 proteasome subunit beta type-3-like 6 51962967 51963586 + 116902715 MODEL JAAIVD010000024 pseudo 625919896 LOC116889912 olfactory receptor 6C6-like 1 160438742 160439701 + 22301074;30032202 116889912 MODEL JAAIVD010000025;XM_032890731 XP_032746622 protein-coding 625919899 LOC116885685 60S ribosomal protein L29-like 16 7401888 7402496 + 116885685 MODEL JAAIVD010000004 pseudo 625919900 Ppid peptidylprolyl isomerase D ENCODES a protein that exhibits cyclosporin A binding (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to UV-A (ortholog); lipid droplet organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 73801145 73813574 - 22301074 116896763 MODEL JAAIVD010000012;XM_032898212 XP_032754103 peptidyl-prolyl cis-trans isomerase D protein-coding 625919914 Pdgfrl platelet derived growth factor receptor like ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog) 13 46571758 46615364 - 116914329 MODEL JAAIVD010000008;XM_032918554 XP_032774445 platelet-derived growth factor receptor-like protein protein-coding 625919923 Syce3 synaptonemal complex central element protein 3 INVOLVED IN ectopic germ cell programmed cell death (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of developmental process (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); nucleus (ortholog) 1 258689465 258714802 - 22301074;30032202 116890175 MODEL JAAIVD010000025;XM_032890909 XP_032746800 protein-coding 625919930 Pla2g4f phospholipase A2 group IVF ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); fatty acid transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ruffle membrane (ortholog) 5 98432339 98447539 - 22301074;30032202 116901830 MODEL JAAIVD010000023;XM_032903994 XP_032759885 cytosolic phospholipase A2 zeta protein-coding 625919954 Sqle squalene epoxidase ENCODES a protein that exhibits FAD binding (ortholog); squalene monooxygenase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH cholelithiasis (ortholog); Experimental Liver Neoplasms (ortholog); Hypercholesterolemia (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 1 233829246 233844950 + 22301074;30032202 116911959 MODEL JAAIVD010000025;XM_032915883 XP_032771774 squalene monooxygenase protein-coding 625919969 LOC116897627 U6atac minor spliceosomal RNA 3 36419988 36420117 + 116897627 MODEL JAAIVD010000012;XR_004387607 snrna 625919972 LOC116890103 olfactory receptor 6C2-like 1 232613417 232614352 - 22301074;30032202 116890103 MODEL JAAIVD010000025;XM_032890850 XP_032746741 protein-coding 625919975 Ppl periplakin INVOLVED IN regulation of antibacterial peptide production (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 9 16777183 16823684 + 22301074;30032202 116909083 MODEL JAAIVD010000002;XM_032912559 XP_032768450 protein-coding 625920001 Cdc42bpa CDC42 binding protein kinase alpha ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN actomyosin (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) 10 58277303 58498187 + 22301074;30032202 116910880 MODEL JAAIVD010000005;XM_032914650 XP_032770541 serine/threonine-protein kinase MRCK alpha protein-coding 625920044 Pth1r parathyroid hormone 1 receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); parathyroid hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; G protein mediated signaling pathway via Galphas family; parathyroid hormone signaling pathway; ASSOCIATED WITH brachydactyly type E1 (ortholog); chondrodysplasia Blomstrand type (ortholog); connective tissue disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 8 101303428 101323999 - 22301074;30032202 116907770 MODEL JAAIVD010000027;XM_032910910 XP_032766801 parathyroid hormone/parathyroid hormone-related peptide receptor protein-coding 625920062 Nup153 nucleoporin 153 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); negative regulation of RNA export from nucleus (ortholog); nuclear pore complex assembly (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Pulmonary Atresia (ortholog); FOUND IN annulate lamellae (ortholog); cytosol (ortholog); membrane (ortholog) 14 65657637 65709976 - 30032202 116883856 MODEL JAAIVD010000009;XM_032885124 XP_032741015 nuclear pore complex protein Nup153 protein-coding 625920088 LOC116883848 calmodulin-like protein 3 14 18148798 18150151 - 22301074;30032202 116883848 MODEL JAAIVD010000009;XM_032885113 XP_032741004 protein-coding 625920093 Wdr44 WD repeat domain 44 ENCODES a protein that exhibits molecular sequestering activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cytosolic ciliogenesis (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of cilium assembly (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); microtubule (ortholog) X 51124905 51227056 - 22301074 116888326 MODEL JAAIVD010000014;XM_032889598 XP_032745489 WD repeat-containing protein 44 protein-coding 625920117 LOC116902604 small nucleolar RNA SNORA17 5 49297575 49297702 - 116902604 MODEL JAAIVD010000023;XR_004388191 snorna 625920120 LOC116898117 keratinocyte-associated protein 2-like 4 104572535 104573023 + 116898117 MODEL JAAIVD010000003;XM_032899498 XP_032755389 protein-coding 625920125 Mrpl42 mitochondrial ribosomal protein L42 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 1 174703169 174723584 - 30032202 116908472 MODEL JAAIVD010000025;XM_032911626;XM_032911635 XP_032767517;XP_032767526 39S ribosomal protein L42, mitochondrial protein-coding 625920138 C8H11orf65 chromosome 8 C11orf65 homolog INVOLVED IN negative regulation of mitochondrial fission (ortholog); negative regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog) 8 47390754 47416326 + 116906820 MODEL JAAIVD010000027;XM_032909703 XP_032765594 uncharacterized protein C11orf65 homolog protein-coding 625920150 Rgs21 regulator of G protein signaling 21 INVOLVED IN sensory perception of bitter taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog) 10 24381067 24404999 - 116911553 MODEL JAAIVD010000005;XM_032915542 XP_032771433 regulator of G-protein signaling 21 protein-coding 625920157 Tnfaip8l2 TNF alpha induced protein 8 like 2 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of T cell activation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 3 62107908 62110717 + 22301074;30032202 116896568 MODEL JAAIVD010000012;XM_032897777 XP_032753668 tumor necrosis factor alpha-induced protein 8-like protein 2 protein-coding 625920163 LOC116885987 U6 spliceosomal RNA 16 262904 263009 + 116885987 MODEL JAAIVD010000004;XR_004386063 snrna 625920166 LOC116894863 U6 spliceosomal RNA 2 28316020 28316126 + 116894863 MODEL JAAIVD010000001;XR_004387076 snrna 625920169 C9orf72 C9orf72-SMCR8 complex subunit ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); autophagy (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autoimmune disease (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog); axonal growth cone (ortholog) 1 107608956 107633581 + 22301074;30032202 116902124 MODEL JAAIVD010000025;XM_032904445 XP_032760336 guanine nucleotide exchange C9orf72 homolog protein-coding 625920184 Ltv1 LTV1 ribosome biogenesis factor PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH inflammatory poikiloderma with hair abnormalities and acral keratoses (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 224001183 224015441 + 22301074;30032202 116893577 MODEL JAAIVD010000001;XM_032895282 XP_032751173 protein LTV1 homolog protein-coding 625920199 LOC116910975 regulator of nonsense transcripts 3B-like 10 89232205 89233815 + 116910975 MODEL JAAIVD010000005 pseudo 625920200 LOC116915164 U6 spliceosomal RNA 13 26627608 26627714 - 116915164 MODEL JAAIVD010000008;XR_004389826 snrna 625920203 Srm spermidine synthase ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); spermidine synthase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); response to testosterone (ortholog); spermidine biosynthetic process (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog) 1 12179957 12183141 - 30032202 116892772 MODEL JAAIVD010000025;XM_032894649 XP_032750540 protein-coding 625920215 LOC116901767 uncharacterized LOC116901767 5 94274531 94278784 + 116901767 MODEL JAAIVD010000023;XR_004388021 ncrna 625920221 Efemp2 EGF containing fibulin extracellular matrix protein 2 ENCODES a protein that exhibits heparin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); artery development (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic disease (ortholog); aortic dissection (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); extracellular matrix (ortholog) 2 2192188 2199927 - 22301074 116890713 MODEL JAAIVD010000001;XM_032891155;XM_032891156;XM_032891158;XM_032891159;XM_032891160 XP_032747046;XP_032747047;XP_032747049;XP_032747050;XP_032747051 EGF-containing fibulin-like extracellular matrix protein 2 protein-coding 625920249 LOC116895878 cyclin-D-binding Myb-like transcription factor 1 3 107674725 107676418 - 116895878 MODEL JAAIVD010000012 pseudo 625920250 Lsm6 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) 17 21275730 21289451 + 22301074;30032202 116886381 MODEL JAAIVD010000011;XM_032887847;XM_032887848 XP_032743738;XP_032743739 U6 snRNA-associated Sm-like protein LSm6 protein-coding 625920262 LOC116906021 cytochrome c oxidase subunit 7B, mitochondrial-like 7 24771955 24772199 - 116906021 MODEL JAAIVD010000026 pseudo 625920263 Pnpla1 patatin like domain 1, omega-hydroxyceramide transacylase ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); omega-hydroxyceramide transacylase activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); keratinocyte differentiation (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 10 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 18 4973968 5006800 - 30032202 116887574 MODEL JAAIVD010000013;XM_032889194 XP_032745085 patatin like phospholipase domain containing 1;patatin-like phospholipase domain-containing protein 1 protein-coding 625920274 LOC116889244 cyclic nucleotide-gated cation channel alpha-4-like 1 126043494 126044269 - 116889244 MODEL JAAIVD010000025 pseudo 625920275 LOC116885832 60S ribosomal protein L7-like 16 31075346 31076228 - 116885832 MODEL JAAIVD010000004 pseudo 625920276 Lrrn2 leucine rich repeat neuronal 2 10 2908393 2911533 - 22301074 116911122 MODEL JAAIVD010000005;XM_032914968 XP_032770859 leucine-rich repeat neuronal protein 2 protein-coding 625920281 Rbpms RNA binding protein, mRNA processing factor ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN protein-containing complex assembly (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 13 53080287 53221209 + 30032202 116914782 MODEL JAAIVD010000008;XM_032919231;XM_032919232 XP_032775122;XP_032775123 RNA-binding protein with multiple splicing protein-coding 625920297 Rnf126 ring finger protein 126 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cytoplasm protein quality control by the ubiquitin-proteasome system (ortholog); DNA strand resection involved in replication fork processing (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 155106833 155114260 + 22301074;30032202 116905637 MODEL JAAIVD010000025;XM_032908617;XM_032908622;XM_032908626 XP_032764508;XP_032764513;XP_032764517 E3 ubiquitin-protein ligase RNF126 protein-coding 625920318 Znf277 zinc finger protein 277 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); regulation of cellular senescence (ortholog) 7 53547124 53601201 - 116906065 MODEL JAAIVD010000026;XM_032909101 XP_032764992 protein-coding 625920333 Cd34 CD34 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sulfate binding (ortholog); INVOLVED IN cell motility (ortholog); cell-cell adhesion (ortholog); endothelial cell proliferation (ortholog); ASSOCIATED WITH diabetic retinopathy (ortholog); hepatocellular carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cell periphery (ortholog) 10 72888429 72908160 + 22301074;30032202 116911401 MODEL JAAIVD010000005;XM_032915361;XM_032915362 XP_032771252;XP_032771253 hematopoietic progenitor cell antigen CD34 protein-coding 625920348 Azin2 antizyme inhibitor 2 ENCODES a protein that exhibits ornithine decarboxylase activator activity (ortholog); INVOLVED IN negative regulation of protein catabolic process (ortholog); ornithine metabolic process (ortholog); positive regulation of catalytic activity (ortholog); FOUND IN axon (ortholog); cis-Golgi network (ortholog); cytoplasmic vesicle (ortholog) 1 29172803 29200033 + 22301074;30032202 116896325 MODEL JAAIVD010000025;XM_032897423 XP_032753314 protein-coding 625920363 LOC116902561 small nucleolar RNA SNORA48 5 42517021 42517160 + 116902561 MODEL JAAIVD010000023;XR_004388158 snorna 625920366 LOC116889109 probable G-protein coupled receptor 83 X 55550391 55558669 - 22301074;30032202 116889109 MODEL JAAIVD010000014;XM_032890275 XP_032746166 protein-coding 625920375 Cep164 centrosomal protein 164 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical part of cell (ortholog); centriole (ortholog) 8 40296773 40360360 - 22301074 116906687 MODEL JAAIVD010000027;XM_032909478 XP_032765369 centrosomal protein of 164 kDa protein-coding 625920411 LOC116893612 mas-related G-protein coupled receptor member G-like 2 5953157 5956595 + 22301074;30032202 116893612 MODEL JAAIVD010000001;XM_032895320 XP_032751211 protein-coding 625920417 Nudt22 nudix hydrolase 22 ENCODES a protein that exhibits metal ion binding (ortholog); UDP-sugar diphosphatase activity (ortholog); FOUND IN nucleoplasm (ortholog) 2 799605 803509 + 30032202 116894808 MODEL JAAIVD010000001;XM_032896473;XM_032896474 XP_032752364;XP_032752365 uridine diphosphate glucose pyrophosphatase NUDT22 protein-coding 625920430 LOC116898220 40S ribosomal protein S18-like 1 95973482 95973993 + 116898220 MODEL JAAIVD010000025 pseudo 625920431 LOC116886867 uncharacterized LOC116886867 1 26823814 26825151 + 116886867 MODEL JAAIVD010000025;XR_004386191 ncrna 625920436 LOC116893664 olfactory receptor 10V1-like 2 11948253 11949209 - 22301074 116893664 MODEL JAAIVD010000001;XM_032895381 XP_032751272 protein-coding 625920439 Sema3g semaphorin 3G ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog) 13 6920667 6931605 + 30032202 116914724 MODEL JAAIVD010000008;XM_032919154 XP_032775045 semaphorin-3G protein-coding 625920458 LOC116901456 uncharacterized LOC116901456 5 40635652 40657727 - 116901456 MODEL JAAIVD010000023;XR_004387996 ncrna 625920463 LOC116895531 late cornified envelope protein 3D-like 3 120340911 120341207 + 22301074 116895531 MODEL JAAIVD010000012;XM_032896776 XP_032752667 protein-coding 625920466 LOC116913644 olfactory receptor 2T2 12 84151042 84152010 + 22301074 116913644 MODEL JAAIVD010000007;XM_032917912 XP_032773803 protein-coding 625920469 Med6 mediator complex subunit 6 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 7 95764070 95777807 - 22301074;30032202 116905239 MODEL JAAIVD010000026;XM_032908063;XM_032908064 XP_032763954;XP_032763955 mediator of RNA polymerase II transcription subunit 6 protein-coding 625920485 Naa50 N-alpha-acetyltransferase 50, NatE catalytic subunit ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); protein-lysine-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN establishment of mitotic sister chromatid cohesion (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); N-terminal protein amino acid acetylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) 4 29033346 29052285 + 22301074;30032202 116898860 MODEL JAAIVD010000003;XM_032900225;XM_032900226 XP_032756116;XP_032756117 N-alpha-acetyltransferase 50 protein-coding 625920498 Disp3 dispatched RND transporter family member 3 INVOLVED IN negative regulation of neuron differentiation (ortholog); positive regulation of lipid metabolic process (ortholog); positive regulation of neural precursor cell proliferation (ortholog); FOUND IN cytoplasm (ortholog) 1 12485987 12534910 + 22301074 116892817 MODEL JAAIVD010000025;XM_032894703 XP_032750594 protein dispatched homolog 3 protein-coding 625920523 LOC116905942 membrane magnesium transporter 2 7 19221275 19223196 + 30032202 116905942 MODEL JAAIVD010000026;XM_032908936 XP_032764827 protein-coding 625920528 LOC116894743 twinkle protein, mitochondrial-like 2 114313163 114314245 - 116894743 MODEL JAAIVD010000001 pseudo 625920529 LOC116884404 60S acidic ribosomal protein P1-like 15 65716653 65724821 + 30032202 116884404 MODEL JAAIVD010000010;XM_032885506 XP_032741397 protein-coding 625920533 LOC116905334 low molecular weight phosphotyrosine protein phosphatase-like 7 104859994 104860850 - 116905334 MODEL JAAIVD010000026 pseudo 625920534 Nudt5 nudix hydrolase 5 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); ADP-ribose diphosphatase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); chromatin remodeling (ortholog); D-ribose catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN nucleus (ortholog) 14 12170309 12183716 + 30032202 116883787 MODEL JAAIVD010000009;XM_032885030;XM_032885031 XP_032740921;XP_032740922 ADP-sugar pyrophosphatase protein-coding 625920550 LOC116915153 small nucleolar RNA U13 13 55763503 55763607 + 116915153 MODEL JAAIVD010000008;XR_004389821 snorna 625920553 Hdac5 histone deacetylase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cellular response to fluid shear stress (ortholog); cellular response to lipopolysaccharide (ortholog); heart development (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; histone modification pathway; ASSOCIATED WITH acute kidney failure (ortholog); adjustment disorder (ortholog); bipolar disorder (ortholog); FOUND IN axonal growth cone (ortholog); chromatin (ortholog); cytoplasm (ortholog) 9 61492692 61527424 - 22301074;30032202 116908677 MODEL JAAIVD010000002;XM_032911976;XM_032911977;XM_032911978;XM_032911979;XM_032911980;XM_032911981 XP_032767867;XP_032767868;XP_032767869;XP_032767870;XP_032767871;XP_032767872 protein-coding 625920598 Adam22 ADAM metallopeptidase domain 22 INVOLVED IN adult locomotory behavior (ortholog); gliogenesis (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 61 (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) 6 140062492 140283800 - 22301074;30032202 116904137 MODEL JAAIVD010000024;XM_032907027 XP_032762918 disintegrin and metalloproteinase domain-containing protein 22 protein-coding 625920634 Ddi1 DDI proteasomal shuttling factor 1 INVOLVED IN cellular response to hydroxyurea (ortholog); proteasomal protein catabolic process (ortholog); regulation of DNA stability (ortholog) 8 2930591 2932432 - 22301074 116907883 MODEL JAAIVD010000027;XM_032911071 XP_032766962 DNA damage inducible 1 homolog 1;protein DDI1 homolog 1 protein-coding 625920639 LOC116905734 non-specific lipid-transfer protein-like 7 73095847 73096350 - 116905734 MODEL JAAIVD010000026 pseudo 625920640 Slc38a3 solute carrier family 38 member 3 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-asparagine transmembrane transporter activity (ortholog); L-asparagine, sodium:proton antiporter activity (ortholog); INVOLVED IN asparagine transport (ortholog); cellular response to potassium ion starvation (ortholog); female pregnancy (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 102 (ortholog); Dwarfism (ortholog); Endotoxemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 8 98968853 98985209 - 30032202 116907539 MODEL JAAIVD010000027;XM_032910558 XP_032766449 sodium-coupled neutral amino acid transporter 3 protein-coding 625920660 LOC116900142 olfactory receptor 1L4-like 5 14816580 14817503 + 22301074;30032202 116900142 MODEL JAAIVD010000023;XM_032901915 XP_032757806 protein-coding 625920663 LOC116894000 olfactory receptor 51I1 2 101609103 101610047 + 22301074 116894000 MODEL JAAIVD010000001;XM_032895716 XP_032751607 protein-coding 625920666 Ehbp1 EH domain binding protein 1 ASSOCIATED WITH myoepithelioma (ortholog); Prostate Cancer, Hereditary, 12 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 11 94504038 94759798 + 22301074 116912240 MODEL JAAIVD010000006;XM_032916220 XP_032772111 EH domain-binding protein 1 protein-coding 625920695 LOC116906193 FGFR1 oncogene partner 2 homolog 7 118281327 118283323 + 116906193 MODEL JAAIVD010000026 pseudo 625920696 Smarca4 SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN aorta development (ortholog); aortic smooth muscle cell differentiation (ortholog); blastocyst growth (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; cortisol signaling pathway; histone modification pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); atrial heart septal defect (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); fibrillar center (ortholog) 8 17885953 17977507 + 22301074;30032202 116907889 MODEL JAAIVD010000027;XM_032911078;XM_032911079;XM_032911080 XP_032766969;XP_032766970;XP_032766971 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4;transcription activator BRG1 protein-coding 625920741 Tbxa2r thromboxane A2 receptor ENCODES a protein that exhibits thromboxane receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); negative regulation of cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); aspirin-induced respiratory disease (ortholog); asthma (ortholog); FOUND IN acrosomal vesicle (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) 1 153556812 153560110 - 30032202 116904393 MODEL JAAIVD010000025;XM_032907256 XP_032763147 protein-coding 625920747 Ivns1abp influenza virus NS1A binding protein INVOLVED IN negative regulation of intrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); response to virus (ortholog); ASSOCIATED WITH immunodeficiency 70 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 10 30772117 30791961 + 22301074 116910857 MODEL JAAIVD010000005;XM_032914616;XM_032914617;XM_032914618 XP_032770507;XP_032770508;XP_032770509 influenza virus NS1A-binding protein protein-coding 625920774 Znf804b zinc finger protein 804B 6 138942281 138952547 - 30032202 116902994 MODEL JAAIVD010000024;XM_032905309 XP_032761200 protein-coding 625920780 LOC116906225 uncharacterized LOC116906225 1 156019176 156020272 - 116906225 MODEL JAAIVD010000025;XR_004388586;XR_004388587 ncrna 625920788 Arid4a AT-rich interaction domain 4A ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin organization (ortholog); erythrocyte development (ortholog); establishment of Sertoli cell barrier (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); multiple myeloma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 7 84671304 84741045 + 30032202 116905138 MODEL JAAIVD010000026;XM_032907901 XP_032763792 AT-rich interactive domain-containing protein 4A protein-coding 625920815 Hepacam hepatic and glial cell adhesion molecule INVOLVED IN protein localization to cell-cell junction (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN astrocyte end-foot (ortholog); cell-cell junction (ortholog) 8 33550952 33567164 + 116907103 MODEL JAAIVD010000027;XM_032910070 XP_032765961 hepatocyte cell adhesion molecule protein-coding 625920826 Aars2 alanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); peptide lactyltransferase (ATP-dependent) activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); mitochondrial alanyl-tRNA aminoacylation (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 8 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 4 84375271 84386437 - 22301074;30032202 116899135 MODEL JAAIVD010000003;XM_032900669 XP_032756560 alanine--tRNA ligase, mitochondrial protein-coding 625920852 Dnm1 dynamin 1 ENCODES a protein that exhibits D2 dopamine receptor binding (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN clathrin coat assembly involved in endocytosis (ortholog); endocytosis (ortholog); endosome organization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 31A (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); endocytic vesicle (ortholog) 5 3278385 3321380 + 22301074;30032202 116901148 MODEL JAAIVD010000023;XM_032902762;XM_032902763;XM_032902764;XM_032902765;XM_032902766;XM_032902767;XM_032902768;XM_032902769;XM_032902771;XM_032902772;XR_004387960;XR_004387961;XR_004387962 XP_032758653;XP_032758654;XP_032758655;XP_032758656;XP_032758657;XP_032758658;XP_032758659;XP_032758660;XP_032758662;XP_032758663 dynamin-1 protein-coding 625920904 LOC116889826 60S ribosomal protein L10-like 116889826 MODEL JAAIVD010001388 pseudo 625920905 LOC116911474 mucin-5AC-like 10 52494457 52508536 - 30032202 116911474 MODEL JAAIVD010000005;XM_032915457 XP_032771348 protein-coding 625920915 Emc3 ER membrane protein complex subunit 3 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 6 33004471 33020539 + 22301074;30032202 116903406 MODEL JAAIVD010000024;XM_032905920 XP_032761811 protein-coding 625920927 LOC116885566 40S ribosomal protein S15a-like 16 23445073 23445539 - 116885566 MODEL JAAIVD010000004 pseudo 625920928 Prdm1 PR/SET domain 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN aorta development (ortholog); artery morphogenesis (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Chronic Hepatitis B (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 44232039 44252505 - 22301074;30032202 116887375 MODEL JAAIVD010000013;XM_032888967;XM_032888968;XM_032888969;XM_032888970;XM_032888971 XP_032744858;XP_032744859;XP_032744860;XP_032744861;XP_032744862 PR domain zinc finger protein 1 protein-coding 625920949 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 48251757 48251828 - 116914207 MODEL JAAIVD010000007 trna 625920950 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50269780 50269852 + 116911908 MODEL JAAIVD010000005 trna 625920951 Slc16a3 solute carrier family 16 member 3 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); lactate:proton symporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog) 9 63076666 63086608 - 22301074;30032202 116909837 MODEL JAAIVD010000002;XM_032913559;XM_032913560;XM_032913561 XP_032769450;XP_032769451;XP_032769452 monocarboxylate transporter 4 protein-coding 625920964 Lix1l limb and CNS expressed 1 like INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); mitral valve development (ortholog) 3 60682483 60706187 - 30032202 116896506 MODEL JAAIVD010000012;XM_032897685 XP_032753576 LIX1-like protein protein-coding 625920974 LOC116907259 methyl-CpG-binding domain protein 3-like 2B 8 14211821 14213446 - 116907259 MODEL JAAIVD010000027;XM_032910215 XP_032766106 protein-coding 625920978 Slc39a12 solute carrier family 39 member 12 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of sprouting angiogenesis (ortholog); regulation of microtubule polymerization (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH melanoma (ortholog); Pulmonary Hypertension, Hypoxia-Induced (ortholog); Right Ventricular Hypertrophy (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 14 9206878 9289578 - 22301074;30032202 116883678 MODEL JAAIVD010000009;XM_032884887;XM_032884888 XP_032740778;XP_032740779 zinc transporter ZIP12 protein-coding 625920995 Mrpl2 mitochondrial ribosomal protein L2 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 4 83213963 83217743 - 22301074;30032202 116899105 MODEL JAAIVD010000003;XM_032900622 XP_032756513 39S ribosomal protein L2, mitochondrial protein-coding 625921005 LOC116883869 prolactin-2C5-like 14 46940342 46948924 + 22301074;30032202 116883869 MODEL JAAIVD010000009;XM_032885134;XM_032885135 XP_032741025;XP_032741026 prolactin-2C2-like protein-coding 625921016 Slc44a2 solute carrier family 44 member 2 (CTL2 blood group) ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 8 17591381 17626535 + 22301074;30032202 116906773 MODEL JAAIVD010000027;XM_032909619;XM_032909620 XP_032765510;XP_032765511 choline transporter-like protein 2 protein-coding 625921045 Slc6a7 solute carrier family 6 member 7 ENCODES a protein that exhibits L-proline transmembrane transporter activity (ortholog); proline:sodium symporter activity (ortholog); INVOLVED IN proline transmembrane transport (ortholog); proline transport (ortholog); protein catabolic process (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog); Schaffer collateral - CA1 synapse (ortholog) 15 70933360 70953358 + 22301074;30032202 116884554 MODEL JAAIVD010000010;XM_032885692;XM_032885693;XM_032885694;XM_032885695 XP_032741583;XP_032741584;XP_032741585;XP_032741586 sodium-dependent proline transporter protein-coding 625921072 LOC116889907 60S ribosomal protein L5-like 1 160262872 160263756 - 116889907 MODEL JAAIVD010000025 pseudo 625921073 Plppr5 phospholipid phosphatase related 5 INVOLVED IN positive regulation of filopodium assembly (ortholog); positive regulation of neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) 3 42068730 42175618 - 30032202 116896320 MODEL JAAIVD010000012;XM_032897415 XP_032753306 phospholipid phosphatase-related protein type 5 protein-coding 625921083 Calr calreticulin ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to lithium ion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Burkitt lymphoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cytoplasm (ortholog) 17 15444628 15449432 + 22301074;30032202 116886151 MODEL JAAIVD010000011;XM_032887511 XP_032743402 protein-coding 625921096 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50215666 50215748 + 116911924 MODEL JAAIVD010000005 trna 625921097 Ndufc1 NADH:ubiquinone oxidoreductase subunit C1 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 3 103048931 103052815 + 22301074;30032202 116896891 MODEL JAAIVD010000012;XM_032898437;XM_032898438 XP_032754328;XP_032754329 NADH dehydrogenase [ubiquinone] 1 subunit C1, mitochondrial protein-coding 625921108 LOC116913862 heterogeneous nuclear ribonucleoprotein A1-like 12 2314031 2315364 - 116913862 MODEL JAAIVD010000007 pseudo 625921109 Farp2 FERM, ARH/RhoGEF and pleckstrin domain protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell adhesion (ortholog); hair cycle process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chromosome 2q37 deletion syndrome (ortholog); FOUND IN cytoplasm (ortholog) 4 165446301 165552271 + 22301074;30032202 116899667 MODEL JAAIVD010000003;XM_032901682 XP_032757573 FERM, ARHGEF and pleckstrin domain-containing protein 2 protein-coding 625921140 Gpr31 G protein-coupled receptor 31 ENCODES a protein that exhibits arachidonate binding (ortholog); bioactive lipid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of immune response (ortholog); FOUND IN plasma membrane (ortholog) 2 186668651 186669981 + 22301074 116894622 MODEL JAAIVD010000001;XM_032896338 XP_032752229 12-(S)-hydroxy-5,8,10,14-eicosatetraenoic acid receptor protein-coding 625921144 Spag1 sperm associated antigen 1 ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); Cohen syndrome (ortholog); genetic disease (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 209709760 209769459 + 30032202 116910571 MODEL JAAIVD010000025;XM_032914494 XP_032770385 sperm-associated antigen 1 protein-coding 625921167 Zbbx zinc finger B-box domain containing 3 78707627 78799030 + 22301074;30032202 116896778 MODEL JAAIVD010000012;XM_032898239 XP_032754130 zinc finger B-box domain-containing protein 1 protein-coding 625921188 LOC116887411 40S ribosomal protein S13-like 1 41109278 41109771 + 116887411 MODEL JAAIVD010000025 pseudo 625921189 Mlf1 myeloid leukemia factor 1 ENCODES a protein that exhibits DNA binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); myeloid progenitor cell differentiation (ortholog); regulation of cell cycle G1/S phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Stomach Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); cilium (ortholog) 3 87821018 87854667 - 30032202 116895471 MODEL JAAIVD010000012;XM_032896733 XP_032752624 protein-coding 625921200 Klhl40 kelch like family member 40 INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 8 (ortholog); FOUND IN A band (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 8 112937575 112943307 + 22301074;30032202 116907065 MODEL JAAIVD010000027;XM_032910020 XP_032765911 kelch-like protein 40 protein-coding 625921210 Irf4 interferon regulatory factor 4 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); anaplastic large cell lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 49785990 49800081 + 22301074;30032202 116883661 MODEL JAAIVD010000009;XM_032884857;XM_032884858 XP_032740748;XP_032740749 protein-coding 625921223 Sned1 sushi, nidogen and EGF like domains 1 FOUND IN extracellular matrix (ortholog) 4 165167464 165227483 + 22301074;30032202 116899659 MODEL JAAIVD010000003;XM_032901670 XP_032757561 sushi, nidogen and EGF-like domain-containing protein 1 protein-coding 625921258 Cdhr1 cadherin related family member 1 INVOLVED IN photoreceptor cell maintenance (ortholog); photoreceptor cell morphogenesis (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN photoreceptor outer segment membrane (ortholog); plasma membrane (ortholog) 13 15550970 15570297 - 22301074;30032202 116914673 MODEL JAAIVD010000008;XM_032919080 XP_032774971 cadherin-related family member 1 protein-coding 625921279 LOC116915076 peptidyl-tRNA hydrolase 2, mitochondrial-like 13 43447195 43447750 + 116915076 MODEL JAAIVD010000008 pseudo 625921280 LOC116900102 cytochrome b-c1 complex subunit 10-like 5 17996818 17997010 + 116900102 MODEL JAAIVD010000023 pseudo 625921281 LOC116902916 60S ribosomal protein L30-like 1 121509735 121510114 + 116902916 MODEL JAAIVD010000025 pseudo 625921282 Tmem167a transmembrane protein 167A INVOLVED IN constitutive secretory pathway (ortholog); FOUND IN Golgi apparatus (ortholog) 3 206206264 206225244 - 30032202 116897309 MODEL JAAIVD010000012;XM_032899058 XP_032754949 protein kish-A protein-coding 625921290 Tchp trichoplein keratin filament binding INVOLVED IN apoptotic process (ortholog); negative regulation of cell growth (ortholog); negative regulation of cilium assembly (ortholog); FOUND IN apical cortex (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 16 39229996 39245069 - 30032202 116885488 MODEL JAAIVD010000004;XM_032886779;XM_032886780 XP_032742670;XP_032742671 trichoplein keratin filament-binding protein protein-coding 625921310 Fgf21 fibroblast growth factor 21 INVOLVED IN cellular response to glucagon stimulus (ortholog); cellular response to glucose stimulus (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Cardiomegaly (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN extracellular space (ortholog) 2 153906528 153908115 + 22301074;30032202 116892140 MODEL JAAIVD010000001;XM_032893629 XP_032749520 protein-coding 625921317 LOC116900481 olfactory receptor 4C45-like 5 71622427 71623359 + 22301074 116900481 MODEL JAAIVD010000023;XM_032902217 XP_032758108 protein-coding 625921321 Fchsd2 FCH and double SH3 domains 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); membrane organization (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN clathrin-coated pit (ortholog); plasma membrane (ortholog); stereocilium shaft (ortholog) 2 99402461 99592293 + 22301074;30032202 116891753 MODEL JAAIVD010000001;XM_032893065;XM_032893066;XM_032893067 XP_032748956;XP_032748957;XP_032748958 F-BAR and double SH3 domains protein 2 protein-coding 625921352 Noxred1 NADP dependent oxidoreductase domain containing 1 7 101315864 101335550 - 30032202 116905822 MODEL JAAIVD010000026;XM_032908790 XP_032764681 NADP-dependent oxidoreductase domain-containing protein 1 protein-coding 625921361 LOC116891107 interferon-induced protein with tetratricopeptide repeats 1 2 34241582 34250287 + 22301074;30032202 116891107 MODEL JAAIVD010000001;XM_032891821 XP_032747712 protein-coding 625921367 LOC116903184 killer cell lectin-like receptor 2 6 16987158 17010122 + 116903184 MODEL JAAIVD010000024;XM_032905556 XP_032761447 protein-coding 625921380 LOC116894549 GTP-binding nuclear protein Ran, testis-specific isoform 2 177698760 177699918 - 22301074;30032202 116894549 MODEL JAAIVD010000001;XM_032896258 XP_032752149 protein-coding 625921385 LOC116904619 olfactory receptor 6C74-like 6 30050729 30051661 + 22301074;30032202 116904619 MODEL JAAIVD010000024;XM_032907410 XP_032763301 protein-coding 625921388 Sema4f ssemaphorin 4F INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); retinal ganglion cell axon guidance (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 6 63293855 63321639 + 30032202 116903637 MODEL JAAIVD010000024;XM_032906301 XP_032762192 semaphorin-4F protein-coding 625921406 LOC116907153 inosine triphosphate pyrophosphatase-like 8 87127318 87131873 - 116907153 MODEL JAAIVD010000027 pseudo 625921407 Slc36a3 solute carrier family 36 member 3 9 37549269 37576359 - 30032202 116909572 MODEL JAAIVD010000002;XM_032913191 XP_032769082 proton-coupled amino acid transporter 3 protein-coding 625921422 Trappc10 trafficking protein particle complex subunit 10 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Arsenic Poisoning (ortholog); intellectual disability (ortholog); FOUND IN TRAPP complex (ortholog) 18 1466414 1523430 - 30032202 116886851 MODEL JAAIVD010000013;XM_032888302 XP_032744193 trafficking protein particle complex 10 protein-coding 625921449 LOC116883894 Y-box-binding protein 1-like 14 33010062 33011486 - 116883894 MODEL JAAIVD010000009 pseudo 625921450 Znf207 zinc finger protein 207 ENCODES a protein that exhibits heparin binding (ortholog); microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic sister chromatid segregation (ortholog); mitotic spindle assembly (ortholog); FOUND IN kinetochore (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 90011795 90033618 - 30032202 116910403 MODEL JAAIVD010000002;XM_032914242;XM_032914243;XM_032914244;XM_032914245;XM_032914246;XR_004389147;XR_004389148 XP_032770133;XP_032770134;XP_032770135;XP_032770136;XP_032770137 BUB3-interacting and GLEBS motif-containing protein ZNF207 protein-coding 625921481 LOC116910406 serine protease 41 9 1152702 1160505 - 22301074 116910406 MODEL JAAIVD010000002;XM_032914248 XP_032770139 protein-coding 625921490 Dnah3 dynein axonemal heavy chain 3 ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog); spermatogenic failure 18 (ortholog) 2 81588788 81758452 + 22301074;30032202 116891588 MODEL JAAIVD010000001;XM_032892767 XP_032748658 dynein heavy chain 3, axonemal protein-coding 625921554 LOC116906084 uncharacterized protein NKAPD1-like 7 67809398 67810307 - 116906084 MODEL JAAIVD010000026 pseudo 625921555 LOC116883178 glycosylation-dependent cell adhesion molecule 1 1 259529949 259532241 + 116883178 MODEL JAAIVD010000025;XM_032884223 XP_032740114 protein-coding 625921563 LOC116890317 U5 spliceosomal RNA 1 40817893 40818008 + 116890317 MODEL JAAIVD010000025;XR_004386541 snrna 625921566 LOC116896996 glutamic acid-rich protein-like 3 129672379 129695568 - 116896996 MODEL JAAIVD010000012 pseudo 625921567 LOC116908407 small nucleolar RNA SNORA17 8 74154902 74155033 - 116908407 MODEL JAAIVD010000027;XR_004388950 snorna 625921570 LOC116883213 PRELI domain-containing protein 1, mitochondrial-like 14 45244551 45245880 + 116883213 MODEL JAAIVD010000009 pseudo 625921571 Znf436 zinc finger protein 436 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 21937563 21948107 - 30032202 116894359 MODEL JAAIVD010000025;XM_032896064;XM_032896072;XM_032896080;XM_032896088;XM_032896094;XM_032896101 XP_032751955;XP_032751963;XP_032751971;XP_032751979;XP_032751985;XP_032751992 protein-coding 625921594 LOC116912703 igE-binding protein-like 11 19679422 19680025 - 22301074 116912703 MODEL JAAIVD010000006;XM_032916831 XP_032772722 protein-coding 625921597 Magohb mago homolog B, exon junction complex subunit INVOLVED IN mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN exon-exon junction complex (ortholog); exon-exon junction subcomplex mago-y14 (ortholog); neuronal cell body (ortholog) 6 16935196 16943034 + 22301074;30032202 116903183 MODEL JAAIVD010000024;XM_032905554;XM_032905555 XP_032761445;XP_032761446 protein mago nashi homolog 2 protein-coding 625921610 LOC116901733 60S ribosomal protein L19-like 5 89015774 89016509 - 116901733 MODEL JAAIVD010000023 pseudo 625921611 LOC116890439 small nucleolar RNA SNORA72 1 208141123 208141254 - 116890439 MODEL JAAIVD010000025;XR_004386635 snorna 625921614 LOC116883349 F-box/WD repeat-containing protein 12-like 14 69217824 69235312 - 22301074 116883349 MODEL JAAIVD010000009;XM_032884429;XR_004385750;XR_004385751 XP_032740320 protein-coding 625921632 Sf3b3 splicing factor 3b subunit 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of protein catabolic process (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 30517337 30554293 - 22301074;30032202 116886454 MODEL JAAIVD010000011;XM_032887954;XM_032887955 XP_032743845;XP_032743846 protein-coding 625921664 LOC116897247 microtubule-associated protein 1B 3 197133079 197155873 + 30032202 116897247 MODEL JAAIVD010000012;XM_032898977 XP_032754868 protein-coding 625921673 Gabra6 gamma-aminobutyric acid type A receptor subunit alpha6 ENCODES a protein that exhibits benzodiazepine receptor activity (ortholog); diazepam binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN response to ethanol (ortholog); synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); childhood absence epilepsy (ortholog); Cushing Syndrome (ortholog); FOUND IN cerebellar Golgi cell to granule cell synapse (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 9 25172933 25187711 - 22301074;30032202 116909328 MODEL JAAIVD010000002;XM_032912868 XP_032768759 gamma-aminobutyric acid receptor subunit alpha-6 protein-coding 625921684 Vill villin like 8 110293536 110311444 + 22301074;30032202 116907902 MODEL JAAIVD010000027;XM_032911100 XP_032766991 villin-like protein protein-coding 625921708 Krt2 keratin 2 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN epidermis development (ortholog); intermediate filament organization (ortholog); keratinization (ortholog); ASSOCIATED WITH bullous congenital ichthyosiform erythroderma (ortholog); contact dermatitis (ortholog); genetic disease (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 261258906 261266065 + 22301074;30032202 116883654 MODEL JAAIVD010000025;XM_032884851 XP_032740742 keratin, type II cytoskeletal 2 epidermal protein-coding 625921720 LOC116901093 60S ribosomal protein L7-like 5 155175230 155176104 + 22301074;30032202 116901093 MODEL JAAIVD010000023;XM_032902655 XP_032758546 protein-coding 625921724 Capn3 calpain 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); catalytic activity (ortholog); INVOLVED IN calcium-dependent self proteolysis (ortholog); cellular response to calcium ion (ortholog); cellular response to salt stress (ortholog); ASSOCIATED WITH Autosomal Dominant Limb-Girdle Muscular Dystrophy Type 4 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); myofibril (ortholog) 5 98591708 98642890 + 22301074;30032202 116901835 MODEL JAAIVD010000023;XM_032904006;XM_032904007;XM_032904008;XM_032904009;XM_032904010;XM_032904011;XM_032904012 XP_032759897;XP_032759898;XP_032759899;XP_032759900;XP_032759901;XP_032759902;XP_032759903 calpain-3 protein-coding 625921767 Ccl25 C-C motif chemokine ligand 25 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH Jaundice (ortholog); pleurisy (ortholog) 16 2486639 2495970 + 22301074;30032202 116885678 MODEL JAAIVD010000004;XM_032886985 XP_032742876 C-C motif chemokine 25 protein-coding 625921777 LOC116897875 elongin-B-like 4 15045562 15046076 + 116897875 MODEL JAAIVD010000003 pseudo 625921778 LOC116899153 protein phosphatase 1A-like 4 87062447 87063804 - 116899153 MODEL JAAIVD010000003 pseudo 625921779 Itpripl2 ITPRIP like 2 2 83163753 83167258 + 116893133 MODEL JAAIVD010000001;XM_032895063 XP_032750954 inositol 1,4,5-trisphosphate receptor-interacting protein-like 2 protein-coding 625921784 Taf1c TATA-box binding protein associated factor, RNA polymerase I subunit C ENCODES a protein that exhibits RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 39242276 39248887 - 22301074;30032202 116886389 MODEL JAAIVD010000011;XM_032887856;XM_032887857 XP_032743747;XP_032743748 TATA box-binding protein-associated factor RNA polymerase I subunit C protein-coding 625921807 LOC116910493 olfactory receptor 1D2-like 9 33717015 33717956 + 22301074;30032202 116910493 MODEL JAAIVD010000002;XM_032914384 XP_032770275 protein-coding 625921810 Gpx8 glutathione peroxidase 8 (putative) ENCODES a protein that exhibits peroxidase activity (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog) 3 183745037 183748628 + 22301074;30032202 116897184 MODEL JAAIVD010000012;XM_032898872;XM_032898873 XP_032754763;XP_032754764 probable glutathione peroxidase 8 protein-coding 625921820 LOC116901047 uncharacterized LOC116901047 5 133562906 133581191 + 22301074 116901047 MODEL JAAIVD010000023;XM_032902629 XP_032758520 uncharacterized protein LOC116901047 protein-coding 625921838 Ppm1f protein phosphatase, Mg2+/Mn2+ dependent 1F ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 4 2188433 2219229 + 22301074;30032202 116898620 MODEL JAAIVD010000003;XM_032899829 XP_032755720 protein phosphatase 1F protein-coding 625921850 LOC116913768 heat shock protein HSP 90-alpha-like 12 84423505 84426226 - 22301074;30032202 116913768 MODEL JAAIVD010000007;XM_032918074 XP_032773965 protein-coding 625921855 LOC116885098 U7 small nuclear RNA 15 10161044 10161105 + 116885098 MODEL JAAIVD010000010;XR_004385965 snrna 625921858 Arrdc3 arrestin domain containing 3 ENCODES a protein that exhibits beta-3 adrenergic receptor binding (ortholog); INVOLVED IN fat pad development (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 3 215474772 215487305 - 30032202 116897339 MODEL JAAIVD010000012;XM_032899094;XM_032899096;XR_004387417 XP_032754985;XP_032754987 arrestin domain-containing protein 3 protein-coding 625921876 LOC116887075 myosin light polypeptide 6-like 1 36411641 36411973 - 116887075 MODEL JAAIVD010000025 pseudo 625921877 Efcab10 EF-hand calcium binding domain 10 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 7 46741471 46748035 + 22301074 116905666 MODEL JAAIVD010000026;XM_032908650 XP_032764541 EF-hand calcium-binding domain-containing protein 10 protein-coding 625921885 Slc1a7 solute carrier family 1 member 7 ENCODES a protein that exhibits extracellularly glutamate-gated chloride channel activity (ortholog); glutamate:sodium symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); L-glutamate transmembrane transport (ortholog); monoatomic anion transmembrane transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); photoreceptor cell terminal bouton (ortholog) 1 46819384 46863570 - 30032202 116887514 MODEL JAAIVD010000025;XM_032889142;XM_032889148;XM_032889156;XM_032889160;XM_032889168;XM_032889175 XP_032745033;XP_032745039;XP_032745047;XP_032745051;XP_032745059;XP_032745066 excitatory amino acid transporter 5 protein-coding 625921913 Bmp3 bone morphogenetic protein 3 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN negative regulation of ossification (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Tibial Fractures (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) 11 9120724 9146354 + 22301074;30032202 116912461 MODEL JAAIVD010000006;XM_032916527 XP_032772418 protein-coding 625921920 LOC116897569 small nucleolar RNA SNORA17 3 78177007 78177141 - 116897569 MODEL JAAIVD010000012;XR_004387580 snorna 625921923 LOC116906087 transcription factor BTF3-like 7 69913545 69918313 - 116906087 MODEL JAAIVD010000026 pseudo 625921924 Col5a2 collagen type V alpha 2 chain ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); collagen fibril organization (ortholog); eye morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH aortic disease (ortholog); connective tissue disease (ortholog); Disproportionate Tall Stature (ortholog); FOUND IN collagen trimer (ortholog); collagen type V trimer (ortholog) 4 121247607 121383864 - 22301074 116899354 MODEL JAAIVD010000003;XM_032901061 XP_032756952 collagen alpha-2(V) chain protein-coding 625921982 Mybpc3 myosin binding protein C3 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); myosin heavy chain binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); heart morphogenesis (ortholog); myosin filament assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN A band (ortholog); cardiac myofibril (ortholog); myofibril (ortholog) 5 65286303 65304238 + 22301074 116900337 MODEL JAAIVD010000023;XM_032902091;XM_032902092 XP_032757982;XP_032757983 myosin-binding protein C, cardiac-type protein-coding 625922024 LOC116895048 small nucleolar RNA SNORA17 2 38635078 38635207 - 116895048 MODEL JAAIVD010000001;XR_004387231 snorna 625922027 LOC116897599 small nucleolar RNA SNORA17 3 223305935 223306053 - 116897599 MODEL JAAIVD010000012 pseudo 625922028 LOC116903003 vomeronasal type-1 receptor 92 6 146572790 146575399 - 22301074;30032202 116903003 MODEL JAAIVD010000024;XM_032905314 XP_032761205 protein-coding 625922032 LOC116908208 40S ribosomal protein S10-like 8 67564482 67608282 + 116908208 MODEL JAAIVD010000027 pseudo 625922033 LOC116895752 amphoterin-induced protein 1-like 3 36749029 36774720 + 116895752 MODEL JAAIVD010000012 pseudo 625922034 LOC116914964 protein SET-like 13 15063854 15069281 + 116914964 MODEL JAAIVD010000008 pseudo 625922035 LOC116900293 olfactory receptor 8K3-like 5 63639023 63639964 - 22301074;30032202 116900293 MODEL JAAIVD010000023;XM_032902048 XP_032757939 protein-coding 625922038 LOC116893727 olfactory receptor 9Q1-like 2 13802629 13803564 - 22301074;30032202 116893727 MODEL JAAIVD010000001;XM_032895440 XP_032751331 protein-coding 625922041 LOC116907390 secreted seminal-vesicle Ly-6 protein 1-like 8 53971826 53973444 - 30032202 116907390 MODEL JAAIVD010000027;XM_032910343 XP_032766234 protein-coding 625922046 LOC116907050 olfactory receptor 7G3-like 8 14945694 14946638 + 22301074;30032202 116907050 MODEL JAAIVD010000027;XM_032910005 XP_032765896 protein-coding 625922050 C9H17orf75 chromosome 9 C17orf75 homolog INVOLVED IN intracellular protein transport (ortholog); vesicle tethering to Golgi (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 90044322 90058407 + 22301074;30032202 116909442 MODEL JAAIVD010000002;XM_032913021 XP_032768912 protein Njmu-R1 protein-coding 625922064 LOC116893261 small nuclear ribonucleoprotein-associated protein B-like 2 138069740 138070397 - 116893261 MODEL JAAIVD010000001 pseudo 625922065 Atmin ATM interactor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); dynein complex binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN motile cilium assembly (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); FOUND IN nuclear body (ortholog) 17 36579194 36596183 + 30032202 116886095 MODEL JAAIVD010000011;XM_032887420 XP_032743311 protein-coding 625922073 LOC116908500 40S ribosomal protein S28-like 9 37839366 37839577 - 22301074;30032202 116908500 MODEL JAAIVD010000002;XM_032911670 XP_032767561 protein-coding 625922077 COX3 cytochrome c oxidase subunit III MT 8592 9375 + 7751805 B7SE67;E1U5S6 REVIEWED EU273707 ABX45239;YP_002791022 protein-coding 625922078 LOC116883154 dual specificity mitogen-activated protein kinase kinase 4-like 1 39256629 39257823 - 116883154 MODEL JAAIVD010000025 pseudo 625922079 Sat2 spermidine/spermine N1-acetyltransferase family member 2 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN nor-spermidine metabolic process (ortholog); polyamine biosynthetic process (ortholog); putrescine acetylation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway 9 49233423 49235553 + 30032202 116908721 MODEL JAAIVD010000002;XM_032912060;XM_032912061 XP_032767951;XP_032767952 diamine acetyltransferase 2 protein-coding 625922092 LOC116893718 olfactory receptor 10W1-like 2 13645245 13646195 + 22301074 116893718 MODEL JAAIVD010000001;XM_032895433 XP_032751324 protein-coding 625922095 Six3 SIX homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); brain development (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH genetic disease (ortholog); holoprosencephaly (ortholog); holoprosencephaly 2 (ortholog); FOUND IN nucleus (ortholog) 7 7371460 7375476 - 30032202 116905770 MODEL JAAIVD010000026;XM_032908738 XP_032764629 homeobox protein SIX3 protein-coding 625922101 Tesmin testis expressed metallothionein like protein INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) 2 4254363 4272954 - 30032202 116890810 MODEL JAAIVD010000001;XM_032891306 XP_032747197 protein-coding 625922114 LOC116905069 ribose-phosphate pyrophosphokinase 1-like 7 70610346 70611514 + 22301074;30032202 116905069 MODEL JAAIVD010000026;XM_032907775 XP_032763666 protein-coding 625922119 LOC116891189 cytochrome P450 2A1 2 42438227 42453056 - 22301074;30032202 116891189 MODEL JAAIVD010000001;XM_032892009 XP_032747900 protein-coding 625922132 LOC116894382 olfactory receptor 13A1-like 2 156786872 156790413 - 22301074 116894382 MODEL JAAIVD010000001;XM_032896090 XP_032751981 protein-coding 625922136 Mrpl15 mitochondrial ribosomal protein L15 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 1 140152726 140160930 - 22301074;30032202 116903695 MODEL JAAIVD010000025;XM_032906373 XP_032762264 39S ribosomal protein L15, mitochondrial protein-coding 625922145 LOC116883785 AP-1 complex subunit beta-1-like 14 43330233 43333133 - 22301074;30032202 116883785 MODEL JAAIVD010000009;XM_032885028 XP_032740919 protein-coding 625922150 LOC116900073 histone RNA hairpin-binding protein-like 5 9843945 9844916 + 116900073 MODEL JAAIVD010000023 pseudo 625922151 LOC116910930 60S ribosomal protein L9-like 10 61455825 61456386 + 116910930 MODEL JAAIVD010000005 pseudo 625922152 Sec16a SEC16 homolog A, endoplasmic reticulum export factor INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi to plasma membrane transport (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 5 10643857 10678548 + 30032202 116901267 MODEL JAAIVD010000023;XM_032903024 XP_032758915 protein transport protein Sec16A protein-coding 625922187 Srsf10 serine and arginine rich splicing factor 10 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cytosolic transport (ortholog); mRNA splice site recognition (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); macular degeneration (ortholog); Ovarian Neoplasms (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 1 22358975 22371980 - 22301074 116890283 MODEL JAAIVD010000025;XM_032890996 XP_032746887 serine/arginine-rich splicing factor 10 protein-coding 625922197 LOC116888603 histone deacetylase 6-like X 14184001 14189825 + 30032202 116888603 MODEL JAAIVD010000014;XM_032889901;XM_032889902;XM_032889903 XP_032745792;XP_032745793;XP_032745794 protein-coding 625922216 Strip2 striatin interacting protein 2 INVOLVED IN cell migration (ortholog); cytoskeleton organization (ortholog); regulation of cell shape (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FAR/SIN/STRIPAK complex (ortholog) 6 109601237 109639738 - 30032202 116904006 MODEL JAAIVD010000024;XM_032906821 XP_032762712 striatin-interacting protein 2 protein-coding 625922241 LOC116887986 protein YIPF4-like X 71526294 71536409 + 116887986 MODEL JAAIVD010000014 pseudo 625922242 Etv1 ETS variant transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); mechanosensory behavior (ortholog); muscle organ development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplastic Processes (ortholog); Prostatic Neoplasms (ortholog) 7 52020957 52108660 + 22301074;30032202 116904985 MODEL JAAIVD010000026;XM_032907663;XM_032907664;XM_032907665 XP_032763554;XP_032763555;XP_032763556 ETS translocation variant 1 protein-coding 625922265 Klhl6 kelch like family member 6 INVOLVED IN B cell receptor signaling pathway (ortholog); germinal center formation (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); multiple sclerosis (ortholog) 4 4782791 4822556 - 22301074 116898684 MODEL JAAIVD010000003;XM_032899942 XP_032755833 kelch-like protein 6 protein-coding 625922276 Setd7 SET domain containing 7, histone lysine methyltransferase ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); DNA damage response (ortholog); heterochromatin organization (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cognitive disorder (ortholog); extrahepatic cholestasis (ortholog); fetal alcohol spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 3 102891089 102933274 + 22301074 116896887 MODEL JAAIVD010000012;XM_032898434 XP_032754325 histone-lysine N-methyltransferase SETD7 protein-coding 625922288 LOC116890431 U7 small nuclear RNA 1 223640416 223640479 - 116890431 MODEL JAAIVD010000025;XR_004386629 snrna 625922291 Glb1l galactosidase beta 1 like 4 148557685 148568156 - 22301074;30032202 116899527 MODEL JAAIVD010000003;XM_032901395;XM_032901396 XP_032757286;XP_032757287 beta-galactosidase-1-like protein protein-coding 625922312 Sod3 superoxide dismutase 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); superoxide dismutase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); response to copper ion (ortholog); response to hypoxia (ortholog); PARTICIPATES IN cardiovascular system disease pathway; diabetes mellitus pathway; ASSOCIATED WITH brain ischemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 11 53763470 53765076 - 30032202 116912727 MODEL JAAIVD010000006;XM_032916859 XP_032772750 extracellular superoxide dismutase [Cu-Zn] protein-coding 625922317 Chrnb3 cholinergic receptor nicotinic beta 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN presynaptic modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); bipolar disorder (ortholog); cocaine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); dopaminergic synapse (ortholog) 13 59188530 59218304 - 22301074;30032202 116914563 MODEL JAAIVD010000008;XM_032918917;XM_032918918 XP_032774808;XP_032774809 neuronal acetylcholine receptor subunit beta-3 protein-coding 625922332 Crip2 cysteine rich protein 2 INVOLVED IN hemopoiesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell cortex (ortholog) 7 130743579 130748797 + 116905530 MODEL JAAIVD010000026;XM_032908567 XP_032764458 cysteine-rich protein 2 protein-coding 625922343 LOC116909602 olfactory receptor 6C3-like 1 160332863 160350622 + 116909602 MODEL JAAIVD010000025 pseudo 625922344 LOC116900408 olfactory receptor 4C6-like 5 70188563 70189474 - 22301074 116900408 MODEL JAAIVD010000023;XM_032902153 XP_032758044 protein-coding 625922347 Azin1 antizyme inhibitor 1 ENCODES a protein that exhibits ornithine decarboxylase activator activity (ortholog); INVOLVED IN estrous cycle (ortholog); negative regulation of protein catabolic process (ortholog); positive regulation of centrosome duplication (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); nucleus (ortholog) 1 212533983 212560793 + 22301074;30032202 116910872 MODEL JAAIVD010000025;XM_032914631;XM_032914639;XM_032914649 XP_032770522;XP_032770530;XP_032770540 protein-coding 625922369 Astn1 astrotactin 1 INVOLVED IN cell migration (ortholog); cell-cell adhesion (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); membrane (ortholog) 10 37687440 37995176 + 22301074;30032202 116910847 MODEL JAAIVD010000005;XM_032914597;XM_032914598;XM_032914599;XM_032914600;XM_032914601 XP_032770488;XP_032770489;XP_032770490;XP_032770491;XP_032770492 astrotactin-1 protein-coding 625922415 Kiaa1143 KIAA1143 ortholog 8 114083646 114087426 - 116908012 MODEL JAAIVD010000027;XM_032911270 XP_032767161 uncharacterized protein KIAA1143 homolog protein-coding 625922422 Asb4 ankyrin repeat and SOCS box containing 4 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of vasculogenesis (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH pre-eclampsia (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog) 6 133186502 133226206 - 22301074;30032202 116902978 MODEL JAAIVD010000024;XM_032905297 XP_032761188 ankyrin repeat and SOCS box protein 4 protein-coding 625922431 Anks1b ankyrin repeat and sterile alpha motif domain containing 1B ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); postsynapse to nucleus signaling pathway (ortholog); receptor localization to synapse (ortholog); ASSOCIATED WITH Wilson disease (ortholog); FOUND IN centrosome (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 168951883 170054969 + 22301074;30032202 116907973 MODEL JAAIVD010000025;XM_032911207;XM_032911216;XM_032911225;XM_032911232;XM_032911242;XM_032911250;XM_032911258;XM_032911265;XM_032911272;XM_032911280;XM_032911288;XM_032911296;XM_032911305;XM_032911312;XM_032911320;XM_032911325;XM_032911329 XP_032767098;XP_032767107;XP_032767116;XP_032767123;XP_032767133;XP_032767141;XP_032767149;XP_032767156;XP_032767163;XP_032767171;XP_032767179;XP_032767187;XP_032767196;XP_032767203;XP_032767211;XP_032767216;XP_032767220 ankyrin repeat and sterile alpha motif domain-containing protein 1B protein-coding 625922492 Cdc42ep3 CDC42 effector protein 3 FOUND IN actin cytoskeleton (ortholog); plasma membrane (ortholog) 7 13891963 13893649 + 116905890 MODEL JAAIVD010000026;XM_032908876 XP_032764767 protein-coding 625922497 LOC116907027 cytochrome c oxidase subunit 6C-2-like 8 100403883 100404104 - 116907027 MODEL JAAIVD010000027;XM_032909970 XP_032765861 protein-coding 625922501 Colec10 collectin subfamily member 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); D-mannose binding (ortholog); INVOLVED IN complement activation, lectin pathway (ortholog); cranial skeletal system development (ortholog); positive regulation of opsonization (ortholog); ASSOCIATED WITH 3MC syndrome 3 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 1 228870387 228916413 + 116911448 MODEL JAAIVD010000025;XM_032915419 XP_032771310 collectin-10 protein-coding 625922510 Zup1 zinc finger containing ubiquitin peptidase 1 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 28667959 28696181 - 30032202 116887117 MODEL JAAIVD010000013;XM_032888664 XP_032744555 zinc finger-containing ubiquitin peptidase 1 protein-coding 625922523 Mlnr motilin receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); hormone binding (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 12 52118076 52125819 + 30032202 116913171 MODEL JAAIVD010000007;XM_032917373 XP_032773264 protein-coding 625922529 Slc61a1 solute carrier family 61 member 1 ENCODES a protein that exhibits molybdate ion transmembrane transporter activity (ortholog); INVOLVED IN molybdate ion transport (ortholog); response to food (ortholog); response to starvation (ortholog) 1 260796162 260798451 - 22301074;30032202 116883521 MODEL JAAIVD010000025;XM_032884697 XP_032740588 Mfsd5 major facilitator superfamily domain containing 5;molybdate-anion transporter protein-coding 625922535 LOC116893942 H/ACA ribonucleoprotein complex subunit 2-like 2 91449427 91449881 - 116893942 MODEL JAAIVD010000001 pseudo 625922536 LOC116896089 40S ribosomal protein S8-like 3 216858084 216858658 - 116896089 MODEL JAAIVD010000012 pseudo 625922537 LOC116886777 small nucleolar RNA U3 17 42679110 42679320 - 116886777 MODEL JAAIVD010000011;XR_004386172 snorna 625922540 Cep162 centrosomal protein 162 INVOLVED IN cilium assembly (ortholog); FOUND IN axonemal microtubule (ortholog); centriolar satellite (ortholog); centriole (ortholog) 8 81208240 81268440 - 30032202 116906883 MODEL JAAIVD010000027;XM_032909797 XP_032765688 centrosomal protein of 162 kDa protein-coding 625922570 Prim2 DNA primase subunit 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog) 4 109723993 109922650 - 22301074;30032202 116899265 MODEL JAAIVD010000003;XM_032900882;XM_032900883 XP_032756773;XP_032756774 DNA primase large subunit protein-coding 625922592 LOC116896141 geranylgeranyl transferase type-2 subunit beta-like 3 7542435 7545286 + 30032202 116896141 MODEL JAAIVD010000012;XM_032897126 XP_032753017 protein-coding 625922601 LOC116883581 histone H2A type 1-B 14 42745515 42746030 + 22301074;30032202 116883581 MODEL JAAIVD010000009;XM_032884761 XP_032740652 protein-coding 625922606 Rab1a RAB1A, member RAS oncogene family ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cell migration (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 88482273 88508509 + 22301074 116912796 MODEL JAAIVD010000006;XM_032916961 XP_032772852 ras-related protein Rab-1A protein-coding 625922616 Tbc1d2 TBC1 domain family member 2 ENCODES a protein that exhibits cadherin binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 99678046 99725232 - 116901933 MODEL JAAIVD010000025;XM_032904161;XM_032904170 XP_032760052;XP_032760061 TBC1 domain family member 2A protein-coding 625922637 LOC116888333 olfactory receptor 11L1-like X 112954438 112955370 + 22301074 116888333 MODEL JAAIVD010000014;XM_032889604 XP_032745495 protein-coding 625922640 Arfgap2 ARF GTPase activating protein 2 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 5 65426867 65438814 + 22301074;30032202 116901618 MODEL JAAIVD010000023;XM_032903666;XM_032903667;XM_032903668;XM_032903669 XP_032759557;XP_032759558;XP_032759559;XP_032759560 ADP ribosylation factor GTPase activating protein 2;ADP-ribosylation factor GTPase-activating protein 2 protein-coding 625922669 Eda ectodysplasin A ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); death receptor binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cytokine-mediated signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH anodontia (ortholog); Clouston syndrome (ortholog); craniofrontonasal syndrome (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) X 58060707 58151984 + 22301074;30032202 116889181 MODEL JAAIVD010000014;XM_032890344 XP_032746235 ectodysplasin-A protein-coding 625922679 Hnrnph2 heterogeneous nuclear ribonucleoprotein H2 ASSOCIATED WITH Gitelman syndrome (ortholog); syndromic X-linked intellectual developmental disorder Bain type (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); postsynaptic density (ortholog) X 86905826 86911736 + 22301074;30032202 116888636 MODEL JAAIVD010000014;XM_032889930 XP_032745821 protein-coding 625922687 Gdf3 growth differentiation factor 3 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN endoderm development (ortholog); eye development (ortholog); formation of anatomical boundary (ortholog); ASSOCIATED WITH Camptocormia (ortholog); congenital heart disease (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog) 6 24489549 24493669 + 22301074;30032202 116902898 MODEL JAAIVD010000024;XM_032905227 XP_032761118 growth/differentiation factor 3 protein-coding 625922693 Nme4 NME/NM23 nucleoside diphosphate kinase 4 ENCODES a protein that exhibits cardiolipin binding (ortholog); GTPase binding (ortholog); mitochondrion-mitochondrion outer membrane tether activity (ortholog); INVOLVED IN intermembrane phospholipid transfer (ortholog); lipid transport (ortholog); protein hexamerization (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; de novo pyrimidine biosynthetic pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial matrix (ortholog) 9 3352421 3356023 - 22301074;30032202 116909058 MODEL JAAIVD010000002;XM_032912536 XP_032768427 nucleoside diphosphate kinase, mitochondrial protein-coding 625922702 Yju2 YJU2 splicing factor homolog FOUND IN U2-type catalytic step 1 spliceosome (ortholog) 4 87351404 87361155 + 22301074;30032202 116899159 MODEL JAAIVD010000003;XM_032900718;XM_032900719 XP_032756609;XP_032756610 splicing factor YJU2 protein-coding 625922718 Znf22 zinc finger protein 22 ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 29978037 29982200 + 116903361 MODEL JAAIVD010000024;XM_032905835;XM_032905836 XP_032761726;XP_032761727 protein-coding 625922727 LOC116889957 olfactory receptor 6C3-like 1 161850075 161851013 - 22301074;30032202 116889957 MODEL JAAIVD010000025;XM_032890759 XP_032746650 protein-coding 625922730 LOC116908376 small nucleolar RNA U2-30 8 11117943 11118012 - 116908376 MODEL JAAIVD010000027;XR_004388923 snorna 625922733 C1H12orf56 chromosome 1 C12orf56 homolog 1 200082669 200130686 + 116890033 MODEL JAAIVD010000025;XM_032890809 XP_032746700 uncharacterized protein C12orf56 homolog protein-coding 625922750 Reeld1 reeler domain containing 1 ASSOCIATED WITH COVID-19 (ortholog) 17 21319855 21335179 + 30032202 116886646 MODEL JAAIVD010000011;XM_032888146 XP_032744037 reelin domain-containing protein 1 protein-coding 625922760 LOC116889034 uncharacterized LOC116889034 X 19680914 19685323 - 116889034 MODEL JAAIVD010000014 pseudo 625922761 LOC116890111 60S ribosomal protein L15-like 1 234455991 234456606 + 116890111 MODEL JAAIVD010000025 pseudo 625922762 Trim29 tripartite motif containing 29 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH high grade glioma (ortholog); FOUND IN cytoplasm (ortholog) 8 37884910 37909631 + 22301074 116907611 MODEL JAAIVD010000027;XM_032910666 XP_032766557 tripartite motif-containing protein 29 protein-coding 625922775 LOC116897610 small nucleolar RNA SNORA17 3 106842922 106843040 - 116897610 MODEL JAAIVD010000012 pseudo 625922776 LOC116905095 cytochrome b-c1 complex subunit 10 ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 154475320 154480346 + 22301074;30032202 116905095 MODEL JAAIVD010000025;XM_032907822;XM_032907829;XM_032907839 XP_032763713;XP_032763720;XP_032763730 protein-coding 625922790 Coq2 coenzyme Q2, polyprenyltransferase ENCODES a protein that exhibits 4-hydroxybenzoate polyprenyltransferase activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH brain disease (ortholog); coenzyme Q10 deficiency disease (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 10879378 10898833 - 30032202 116912400 MODEL JAAIVD010000006;XM_032916458 XP_032772349 4-hydroxybenzoate polyprenyltransferase, mitochondrial protein-coding 625922801 C2H9orf85 chromosome 2 C9orf85 homolog 2 21692267 21747550 - 116891032 MODEL JAAIVD010000001;XM_032891714 XP_032747605 uncharacterized protein C9orf85 homolog protein-coding 625922809 LOC116888933 prostaglandin D2 receptor-like X 405420 413243 + 116888933 MODEL JAAIVD010000014 pseudo 625922810 Hipk1 homeodomain interacting protein kinase 1 INVOLVED IN adherens junction assembly (ortholog); anterior/posterior pattern specification (ortholog); embryonic camera-type eye morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 3 54281824 54331993 + 22301074;30032202 116896444 MODEL JAAIVD010000012;XM_032897597 XP_032753488 homeodomain-interacting protein kinase 1 protein-coding 625922830 LOC116913533 ras-related protein Rap-1A-like 12 126259 126878 + 116913533 MODEL JAAIVD010000007 pseudo 625922831 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 39931111 39931182 + 116910795 MODEL JAAIVD010000002 trna 625922832 LOC116894676 vomeronasal type-1 receptor 4-like 2 210116442 210117335 + 22301074;30032202 116894676 MODEL JAAIVD010000001;XM_032896379 XP_032752270 protein-coding 625922835 C1qtnf5 C1q and TNF related 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN inner ear development (ortholog); protein secretion (ortholog); ASSOCIATED WITH isolated microphthalmia 5 (ortholog); late-onset retinal degeneration (ortholog); lens disease (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell projection (ortholog) 8 38668436 38670376 + 22301074 116907626 MODEL JAAIVD010000027;XM_032910684;XM_032910685 XP_032766575;XP_032766576 complement C1q tumor necrosis factor-related protein 5 protein-coding 625922847 Lsamp limbic system associated membrane protein INVOLVED IN locomotory exploration behavior (ortholog); FOUND IN cytosol (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) 4 24949701 27104304 + 30032202 116897705 MODEL JAAIVD010000003;XM_032899156;XM_032899157;XM_032899158;XM_032899159;XM_032899160 XP_032755047;XP_032755048;XP_032755049;XP_032755050;XP_032755051 limbic system-associated membrane protein protein-coding 625922870 Slc35a1 solute carrier family 35 member A1 ENCODES a protein that exhibits antiporter activity (ortholog); CMP-N-acetylneuraminate transmembrane transporter activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); CMP-N-acetylneuraminate transmembrane transport (ortholog); N-acetylneuraminate metabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIf (ortholog); genetic disease (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) 1 108069531 108090177 + 22301074;30032202 116902192 MODEL JAAIVD010000025;XM_032904560 XP_032760451 CMP-sialic acid transporter protein-coding 625922882 LOC116910081 olfactory receptor 1361-like 9 33641392 33642303 + 22301074;30032202 116910081 MODEL JAAIVD010000002;XM_032913897 XP_032769788 protein-coding 625922885 Dpysl4 dihydropyrimidinase like 4 ENCODES a protein that exhibits filamin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN neuron development (ortholog) 2 62743086 62758536 - 22301074;30032202 116891366 MODEL JAAIVD010000001;XM_032892363 XP_032748254 dihydropyrimidinase-related protein 4 protein-coding 625922903 LOC116903171 uncharacterized LOC116903171 6 14635845 14644641 - 116903171 MODEL JAAIVD010000024;XR_004388256 ncrna 625922908 LOC116908114 ATP synthase subunit g, mitochondrial-like 8 100019952 100020356 - 22301074;30032202 116908114 MODEL JAAIVD010000027;XM_032911395 XP_032767286 protein-coding 625922913 Vapb VAMP associated protein B and C ENCODES a protein that exhibits beta-tubulin binding (ortholog); enzyme binding (ortholog); FFAT motif binding (ortholog); INVOLVED IN cholesterol transport (ortholog); COPII-coated vesicle budding (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 8 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 5 144197379 144242591 - 22301074;30032202 116902272 MODEL JAAIVD010000023;XM_032904705 XP_032760596 vesicle-associated membrane protein-associated protein B/C protein-coding 625922923 Pitx3 paired like homeodomain 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); dopaminergic neuron differentiation (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 1 (ortholog); Aphakia (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 45602006 45614446 - 22301074;30032202 116893813 MODEL JAAIVD010000001;XM_032895528 XP_032751419 pituitary homeobox 3 protein-coding 625922931 Psmd6 proteasome 26S subunit, non-ATPase 6 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) 12 83992869 84002986 - 22301074;30032202 116913546 MODEL JAAIVD010000007;XM_032917751 XP_032773642 26S proteasome non-ATPase regulatory subunit 6 protein-coding 625922943 LOC116903259 glyceraldehyde-3-phosphate dehydrogenase-like 6 22737072 22737595 + 22301074;30032202 116903259 MODEL JAAIVD010000024;XM_032905641 XP_032761532 protein-coding 625922947 Ntsr2 neurotensin receptor 2 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN exploration behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); membrane (ortholog) 7 36451814 36458476 + 22301074;30032202 116904892 MODEL JAAIVD010000026;XM_032907496 XP_032763387 neurotensin receptor type 2 protein-coding 625922955 LOC116906080 U11/U12 small nuclear ribonucleoprotein 48 kDa protein-like 7 64941865 64942899 - 116906080 MODEL JAAIVD010000026 pseudo 625922956 LOC116913066 sphingomyelin phosphodiesterase 5-like 1 248621002 248623568 + 22301074;30032202 116913066 MODEL JAAIVD010000025;XM_032917198;XM_032917206;XM_032917212 XP_032773089;XP_032773097;XP_032773103 protein-coding 625922973 LOC116897453 U6 spliceosomal RNA 3 47463576 47463674 - 116897453 MODEL JAAIVD010000012 pseudo 625922974 Rida reactive intermediate imine deaminase A ENCODES a protein that exhibits cation binding (ortholog); identical protein binding (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN G1 to G0 transition (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 1 208183939 208197616 - 30032202 116910487 MODEL JAAIVD010000025;XM_032914379 XP_032770270 2-iminobutanoate/2-iminopropanoate deaminase;reactive intermediate imine deaminase A homolog protein-coding 625922984 Tmed4 transmembrane p24 trafficking protein 4 INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog) 11 75193930 75198395 - 30032202 116912528 MODEL JAAIVD010000006;XM_032916627 XP_032772518 transmembrane emp24 domain-containing protein 4 protein-coding 625922993 Dusp14 dual specificity phosphatase 14 9 86610912 86630999 + 22301074;30032202 116909777 MODEL JAAIVD010000002;XM_032913469;XM_032913470;XM_032913471 XP_032769360;XP_032769361;XP_032769362 dual specificity protein phosphatase 14 protein-coding 625923005 LOC116900584 olfactory receptor 4F15-like 5 90504858 90505808 + 22301074 116900584 MODEL JAAIVD010000023;XM_032902306 XP_032758197 protein-coding 625923009 LOC116896880 H/ACA ribonucleoprotein complex subunit 2-like 3 100991275 100993624 + 116896880 MODEL JAAIVD010000012 pseudo 625923010 Sorbs3 sorbin and SH3 domain containing 3 ENCODES a protein that exhibits vinculin binding (ortholog); INVOLVED IN cell-substrate adhesion (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MAPK cascade (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleus (ortholog) 12 54141889 54168878 + 22301074 116913812 MODEL JAAIVD010000007;XM_032918120;XM_032918121;XM_032918122;XM_032918123 XP_032774011;XP_032774012;XP_032774013;XP_032774014 vinexin protein-coding 625923043 Ring1 ring finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin-protein transferase activator activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); camera-type eye morphogenesis (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 18 8301681 8305198 + 30032202 116887407 MODEL JAAIVD010000013;XM_032889004 XP_032744895 E3 ubiquitin-protein ligase RING1 protein-coding 625923054 Tmem40 transmembrane protein 40 6 30967522 30980179 + 116904633 MODEL JAAIVD010000024;XM_032907425;XM_032907426;XM_032907427 XP_032763316;XP_032763317;XP_032763318 protein-coding 625923073 Mcm3ap minichromosome maintenance complex component 3 associated protein ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase activity (ortholog); histone binding (ortholog); INVOLVED IN nucleosome organization (ortholog); poly(A)+ mRNA export from nucleus (ortholog); somatic hypermutation of immunoglobulin genes (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Autosomal Recessive Peripheral Neuropathy with or without Impaired Intellectual Development (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 8 106626761 106664066 - 22301074;30032202 116907856 MODEL JAAIVD010000027;XM_032911045 XP_032766936 germinal-center associated nuclear protein protein-coding 625923105 Serping1 serpin family G member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of complement activation, lectin pathway (ortholog); PARTICIPATES IN coagulation cascade pathway; kallikrein-kinin cascade pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular space (ortholog) 5 62145700 62155776 - 30032202 116901588 MODEL JAAIVD010000023;XM_032903604 XP_032759495 plasma protease C1 inhibitor protein-coding 625923117 Sppl2b signal peptide peptidase like 2B ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog) 1 154017770 154030592 - 22301074;30032202 116906590 MODEL JAAIVD010000025;XM_032909367 XP_032765258 signal peptide peptidase-like 2B protein-coding 625923135 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 24074206 24074278 + 116886022 MODEL JAAIVD010000004 trna 625923136 LOC116907311 ribose-phosphate pyrophosphokinase 1-like 8 27267155 27268122 - 116907311 MODEL JAAIVD010000027 pseudo 625923137 Znf879 zinc finger protein 879 9 33487016 33493646 - 30032202 116908592 MODEL JAAIVD010000002;XM_032911811 XP_032767702 protein-coding 625923144 Qng1 Q-nucleotide N-glycosylase 1 INVOLVED IN nucleoside salvage (ortholog) 14 79750496 79758101 + 116883609 MODEL JAAIVD010000009;XM_032884797;XM_032884799 XP_032740688;XP_032740690 C14H9orf64 chromosome 14 C9orf64 homolog;queuosine salvage protein protein-coding 625923155 Znf568 zinc finger protein 568 2 166024934 166060676 - 30032202 116892336 MODEL JAAIVD010000001;XM_032893970;XM_032893972 XP_032749861;XP_032749863 protein-coding 625923169 LOC116904656 U7 small nuclear RNA 6 23142901 23142962 + 116904656 MODEL JAAIVD010000024;XR_004388356 snrna 625923172 Gpt2 glutamic--pyruvic transaminase 2 ENCODES a protein that exhibits L-alanine:2-oxoglutarate aminotransferase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); cellular response to insulin stimulus (ortholog); gluconeogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Chronic Hepatitis C (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog) 17 14231346 14264269 - 22301074;30032202 116886255 MODEL JAAIVD010000011;XM_032887676 XP_032743567 alanine aminotransferase 2 protein-coding 625923187 LOC116907495 olfactory receptor 145-like 8 32189707 32190657 + 22301074;30032202 116907495 MODEL JAAIVD010000027;XM_032910488 XP_032766379 protein-coding 625923190 LOC116910604 cytochrome b5 domain-containing protein 1 9 49003440 49007924 - 116910604 MODEL JAAIVD010000002;XM_032914545;XM_032914546 XP_032770436;XP_032770437 protein-coding 625923204 Ext1 exostosin glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylglucosaminyl-proteoglycan 4-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axon guidance (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 227557062 227833666 - 22301074;30032202 116911393 MODEL JAAIVD010000025;XM_032915354 XP_032771245 exostosin-1 protein-coding 625923219 Chrna7 cholinergic receptor nicotinic alpha 7 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); associative learning (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); Auditory Perceptual Disorders (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); apical plasma membrane (ortholog); asymmetric synapse (ortholog) 2 136950666 137071611 - 22301074;30032202 116892013 MODEL JAAIVD010000001;XM_032893475;XM_032893476;XM_032893477 XP_032749366;XP_032749367;XP_032749368 neuronal acetylcholine receptor subunit alpha-7 protein-coding 625923238 Epop elongin BC and polycomb repressive complex 2 associated protein ENCODES a protein that exhibits chromatin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN neuron fate commitment (ortholog); regulation of transcription by RNA polymerase II (ortholog); stem cell differentiation (ortholog); FOUND IN elongin complex (ortholog); ESC/E(Z) complex (ortholog) 9 56753920 56756288 + 30032202 116909995 MODEL JAAIVD010000002;XM_032913779 XP_032769670 elongin BC and Polycomb repressive complex 2-associated protein protein-coding 625923243 LOC116892793 zinc finger protein OZF-like 2 185950273 185955533 + 22301074 116892793 MODEL JAAIVD010000001;XM_032894664 XP_032750555 protein-coding 625923251 LOC116894635 uncharacterized LOC116894635 2 195150098 195164523 + 116894635 MODEL JAAIVD010000001;XR_004387032 ncrna 625923256 Prepl prolyl endopeptidase like ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); regulation of synaptic vesicle exocytosis (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 22 (ortholog); genetic disease (ortholog); FOUND IN cytoskeleton (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 7 7840658 7869457 + 22301074;30032202 116905771 MODEL JAAIVD010000026;XM_032908739;XM_032908740;XM_032908741;XM_032908742 XP_032764630;XP_032764631;XP_032764632;XP_032764633 prolyl endopeptidase-like protein-coding 625923284 Abhd4 abhydrolase domain containing 4, N-acyl phospholipase B ENCODES a protein that exhibits phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog) 12 70737694 70749791 - 30032202 116913526 MODEL JAAIVD010000007;XM_032917726 XP_032773617 (Lyso)-N-acylphosphatidylethanolamine lipase protein-coding 625923295 Kcnn3 potassium calcium-activated channel subfamily N member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; schizophrenia pathway; ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); paranoid schizophrenia (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); filopodium (ortholog) 3 64000188 64149496 - 22301074;30032202 116896635 MODEL JAAIVD010000012;XM_032897952;XM_032897953 XP_032753843;XP_032753844 small conductance calcium-activated potassium channel protein 3 protein-coding 625923310 LOC116885652 histidine triad nucleotide-binding protein 1-like 16 7438512 7438971 - 116885652 MODEL JAAIVD010000004 pseudo 625923311 LOC116906107 glyceraldehyde-3-phosphate dehydrogenase-like 7 77190187 77192254 + 116906107 MODEL JAAIVD010000026 pseudo 625923312 LOC116904518 40S ribosomal protein S8-like 6 7045136 7045763 + 116904518 MODEL JAAIVD010000024 pseudo 625923313 Fam170a family with sequence similarity 170 member A INVOLVED IN positive regulation of DNA-templated transcription (ortholog); transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 15 36347645 36352338 + 30032202 116884844 MODEL JAAIVD010000010;XM_032886082;XM_032886083;XM_032886084 XP_032741973;XP_032741974;XP_032741975 protein FAM170A protein-coding 625923327 LOC116902669 U6 spliceosomal RNA 5 127342929 127343034 - 116902669 MODEL JAAIVD010000023;XR_004388231 snrna 625923330 LOC116906383 small nucleolar RNA SNORD113/SNORD114 family 7 127257076 127257150 + 116906383 MODEL JAAIVD010000026;XR_004388653 snorna 625923333 Tmem169 transmembrane protein 169 4 145871231 145895247 + 116899482 MODEL JAAIVD010000003;XM_032901315;XM_032901316 XP_032757206;XP_032757207 protein-coding 625923343 Trir telomerase RNA component interacting RNase ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-3' exonuclease activity (ortholog); INVOLVED IN rRNA catabolic process (ortholog) 17 15261114 15264529 - 30032202 116886163 MODEL JAAIVD010000011;XM_032887535;XM_032887536;XM_032887537 XP_032743426;XP_032743427;XP_032743428 protein-coding 625923358 LOC116905605 eukaryotic initiation factor 4A-II-like 7 12768314 12769714 + 116905605 MODEL JAAIVD010000026 pseudo 625923359 Eml2 EMAP like 2 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); regulation of microtubule nucleation (ortholog); FOUND IN mitotic spindle (ortholog) 2 171412261 171443791 - 30032202 116892545 MODEL JAAIVD010000001;XM_032894310;XM_032894312;XM_032894313;XM_032894314;XR_004386958 XP_032750201;XP_032750203;XP_032750204;XP_032750205 echinoderm microtubule-associated protein-like 2 protein-coding 625923396 Tmigd3 transmembrane and immunoglobulin domain containing 3 INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN membrane (ortholog) 3 52191198 52269727 - 30032202 116896415 MODEL JAAIVD010000012;XM_032897558 XP_032753449 protein-coding 625923407 LOC116908056 uncharacterized LOC116908056 8 38709651 38710716 + 116908056 MODEL JAAIVD010000027;XR_004388871 ncrna 625923411 LOC116896768 histone H3.3-like 3 74231781 74232292 - 116896768 MODEL JAAIVD010000012 pseudo 625923412 Ly6g6f lymphocyte antigen 6 family member G6F 18 7678928 7684189 - 116887503 MODEL JAAIVD010000013;XM_032889121 XP_032745012 lymphocyte antigen 6 complex locus protein G6f protein-coding 625923420 Dph2 diphthamide biosynthesis 2 ENCODES a protein that exhibits 2-(3-amino-3-carboxypropyl)histidine synthase activity (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); diphthamide deficiency syndrome (ortholog); diphthamide deficiency syndrome 2 (ortholog); FOUND IN 2-(3-amino-3-carboxypropyl)histidine synthase complex (ortholog); protein-containing complex (ortholog) 1 39129729 39132956 + 22301074;30032202 116898022 MODEL JAAIVD010000025;XM_032899415 XP_032755306 2-(3-amino-3-carboxypropyl)histidine synthase subunit 2 protein-coding 625923430 LOC116900842 glyceraldehyde-3-phosphate dehydrogenase-like 5 55303132 55372720 + 116900842 MODEL JAAIVD010000023 pseudo 625923431 Elf3 E74 like ETS transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); blastocyst development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH biliary tract benign neoplasm (ortholog); Lung Injury (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 10 453250 458143 + 22301074;30032202 116911398 MODEL JAAIVD010000005;XM_032915358;XM_032915359 XP_032771249;XP_032771250 ETS-related transcription factor Elf-3 protein-coding 625923448 Ripply3 ripply transcriptional repressor 3 INVOLVED IN heart development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 4 50301905 50309852 - 30032202 116897968 MODEL JAAIVD010000003;XM_032899368 XP_032755259 protein ripply3 protein-coding 625923456 LOC116907330 olfactory receptor 8B3-like 8 31703305 31717655 + 116907330 MODEL JAAIVD010000027 pseudo 625923457 Tspan14 tetraspanin 14 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); tetraspanin-enriched microdomain (ortholog) 13 19424006 19482174 - 22301074;30032202 116914474 MODEL JAAIVD010000008;XM_032918774 XP_032774665 tetraspanin-14 protein-coding 625923470 Ubox5 U-box domain containing 5 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein polyubiquitination (ortholog); FOUND IN focal adhesion (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 5 110331622 110342135 - 30032202 116901972 MODEL JAAIVD010000023;XM_032904211 XP_032760102 RING finger protein 37 protein-coding 625923477 Lrrc70 leucine rich repeat containing 70 INVOLVED IN positive regulation of response to cytokine stimulus (ortholog); FOUND IN plasma membrane (ortholog) 3 190794723 190798544 + 116897217 MODEL JAAIVD010000012;XM_032898935 XP_032754826 leucine-rich repeat-containing protein 70 protein-coding 625923483 LOC116904659 U7 small nuclear RNA 6 151845497 151845558 + 116904659 MODEL JAAIVD010000024;XR_004388359 snrna 625923486 LOC116905568 60S ribosomal protein L11-like 7 90381334 90381839 + 22301074;30032202 116905568 MODEL JAAIVD010000026;XM_032908588 XP_032764479 protein-coding 625923490 LOC116902859 olfactory receptor 6B1 6 97617070 97618014 - 22301074 116902859 MODEL JAAIVD010000024;XM_032905188 XP_032761079 protein-coding 625923493 Tbxt T-box transcription factor T ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); bone morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); chordoma (ortholog); neural tube defect (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 187292226 187299835 + 22301074;30032202 116894625 MODEL JAAIVD010000001;XM_032896341;XM_032896342;XM_032896344 XP_032752232;XP_032752233;XP_032752235 protein-coding 625923509 LOC116884855 nucleolar protein 4-like 15 20746272 20810759 + 116884855 MODEL JAAIVD010000010;XM_032886098 XP_032741989 protein-coding 625923515 Tie1 tyrosine kinase with immunoglobulin like and EGF like domains 1 INVOLVED IN aortic valve morphogenesis (ortholog); blood vessel development (ortholog); branching involved in lymph vessel morphogenesis (ortholog); ASSOCIATED WITH Lymphatic Malformation 11 (ortholog); FOUND IN plasma membrane (ortholog) 1 38541631 38560976 + 22301074;30032202 116897778 MODEL JAAIVD010000025;XM_032899207 XP_032755098 tyrosine-protein kinase receptor Tie-1 protein-coding 625923542 LOC116914535 polyadenylate-binding protein 1-like 13 35043771 35045694 - 30032202 116914535 MODEL JAAIVD010000008;XM_032918864 XP_032774755 protein-coding 625923547 LOC116889462 small nucleolar RNA SNORA72 X 59394564 59394683 + 116889462 MODEL JAAIVD010000014 pseudo 625923548 LOC116899219 U1 small nuclear ribonucleoprotein C-like 4 88855885 88856298 - 22301074;30032202 116899219 MODEL JAAIVD010000003;XM_032900816 XP_032756707 protein-coding 625923551 LOC116895520 60S ribosomal protein L39-like 3 117367837 117368019 - 116895520 MODEL JAAIVD010000012 pseudo 625923552 LOC116887459 selection and upkeep of intraepithelial T-cells protein 1-like 1 44584524 44612686 + 30032202 116887459 MODEL JAAIVD010000025;XM_032889070 XP_032744961 protein-coding 625923563 LOC116893215 olfactory receptor 14A2-like 2 114556946 114557902 + 22301074;30032202 116893215 MODEL JAAIVD010000001;XM_032895101 XP_032750992 protein-coding 625923566 LOC116893409 uncharacterized protein C1orf115 homolog 2 173444244 173444690 + 116893409 MODEL JAAIVD010000001 pseudo 625923567 LOC116909831 uncharacterized LOC116909831 9 8537001 8550183 + 116909831 MODEL JAAIVD010000002;XR_004389103 ncrna 625923572 Ccrl2 C-C motif chemokine receptor like 2 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); chemokine receptor binding (ortholog); INVOLVED IN inflammatory response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); skin disease (ortholog); FOUND IN plasma membrane (ortholog) 8 101632679 101634752 - 22301074;30032202 116906839 MODEL JAAIVD010000027;XM_032909727;XM_032909728 XP_032765618;XP_032765619 C-C chemokine receptor-like 2 protein-coding 625923582 LOC116915069 uncharacterized LOC116915069 13 46171554 46194870 - 116915069 MODEL JAAIVD010000008;XR_004389792 ncrna 625923587 Slc38a7 solute carrier family 38 member 7 ENCODES a protein that exhibits L-asparagine:sodium symporter activity (ortholog); L-glutamine:sodium symporter activity (ortholog); INVOLVED IN asparagine transport (ortholog); glutamine transport (ortholog); sodium ion transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon (ortholog); lysosomal membrane (ortholog); neuronal cell body (ortholog) 17 2652784 2667871 - 30032202 116886409 MODEL JAAIVD010000011;XM_032887883 XP_032743774 putative sodium-coupled neutral amino acid transporter 7 protein-coding 625923603 Btg3 BTG anti-proliferation factor 3 INVOLVED IN negative regulation of mitotic cell cycle (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH cholestasis (ortholog); juvenile rheumatoid arthritis (ortholog); renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 4 63701579 63717622 + 30032202 116899044 MODEL JAAIVD010000003;XM_032900511;XM_032900512 XP_032756402;XP_032756403 protein BTG3 protein-coding 625923615 LOC116892946 60S ribosomal protein L36a-like 2 210346709 210347069 + 116892946 MODEL JAAIVD010000001 pseudo 625923616 LOC116908547 L-amino-acid oxidase-like 9 39938631 39945450 - 30032202 116908547 MODEL JAAIVD010000002;XM_032911747 XP_032767638 protein-coding 625923624 Bcas2 BCAS2 pre-mRNA processing factor INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); oocyte development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN centrosome (ortholog); DNA replication factor A complex (ortholog); nuclear speck (ortholog) 3 54860663 54868447 - 22301074;30032202 116896448 MODEL JAAIVD010000012;XM_032897603 XP_032753494 pre-mRNA-splicing factor SPF27 protein-coding 625923635 LOC116898327 prothymosin alpha-like 4 42220472 42220983 + 116898327 MODEL JAAIVD010000003 pseudo 625923636 C6H12orf57 chromosome 6 C12orf57 homolog INVOLVED IN camera-type eye morphogenesis (ortholog); cognition (ortholog); corpus callosum morphogenesis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog) 6 23142917 23144539 + 30032202 116903283 MODEL JAAIVD010000024;XM_032905705;XM_032905706 XP_032761596;XP_032761597 protein C10 protein-coding 625923646 LOC116908312 60S ribosomal protein L10-like 8 37343361 37343808 + 116908312 MODEL JAAIVD010000027 pseudo 625923647 LOC116907328 olfactory receptor 8B3-like 8 31644193 31645137 + 22301074;30032202 116907328 MODEL JAAIVD010000027;XM_032910274 XP_032766165 protein-coding 625923651 LOC116894847 U6 spliceosomal RNA 2 213149291 213149397 + 116894847 MODEL JAAIVD010000001;XR_004387062 snrna 625923654 Ttbk2 tau tubulin kinase 2 ENCODES a protein that exhibits kinesin binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebellar granular layer development (ortholog); cerebellar granule cell precursor tangential migration (ortholog); cerebellum development (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); spastic ataxia (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 5 98868337 98974331 - 22301074;30032202 116901844 MODEL JAAIVD010000023;XM_032904025;XM_032904027;XM_032904028 XP_032759916;XP_032759918;XP_032759919 tau-tubulin kinase 2 protein-coding 625923678 LOC116895083 small nucleolar RNA SNORD88 2 155285863 155285953 - 116895083 MODEL JAAIVD010000001;XR_004387250 snorna 625923681 LOC116895667 nucleoside diphosphate kinase B-like 3 196099960 196100400 - 116895667 MODEL JAAIVD010000012 pseudo 625923682 Col3a1 collagen type III alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); integrin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN aorta development (ortholog); aorta smooth muscle tissue morphogenesis (ortholog); basement membrane organization (ortholog); PARTICIPATES IN endothelin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); alcoholic liver cirrhosis (ortholog); Aneurysm (ortholog); FOUND IN collagen trimer (ortholog); collagen type III trimer (ortholog); extracellular matrix (ortholog) 4 121181557 121217281 + 22301074 116899353 MODEL JAAIVD010000003;XM_032901060 XP_032756951 collagen alpha-1(III) chain protein-coding 625923737 LOC116906332 U6 spliceosomal RNA 7 91514281 91514380 + 116906332 MODEL JAAIVD010000026 pseudo 625923738 Pou2af2 POU class 2 homeobox associating factor 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN nucleus (ortholog) 8 45726943 45767386 - 22301074 116907432 MODEL JAAIVD010000027;XM_032910402 XP_032766293 C8H11orf53 chromosome 8 C11orf53 homolog;uncharacterized protein C11orf53 homolog protein-coding 625923747 Snupn snurportin 1 INVOLVED IN cytoskeleton organization (ortholog); protein complex oligomerization (ortholog); protein tetramerization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 29 (ortholog); FOUND IN cytosol (ortholog); NLS-dependent protein nuclear import complex (ortholog); nucleoplasm (ortholog) 8 50855358 50885967 + 22301074;30032202 116906904 MODEL JAAIVD010000027;XM_032909817;XM_032909818;XM_032909819;XM_032909820;XM_032909821 XP_032765708;XP_032765709;XP_032765710;XP_032765711;XP_032765712 snurportin-1 protein-coding 625923771 Pigu phosphatidylinositol glycan anchor biosynthesis class U ENCODES a protein that exhibits GPI anchor binding (ortholog); GPI-anchor transamidase activity (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchor biosynthetic process (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 21 (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog); plasma membrane (ortholog) 5 134633870 134705097 - 30032202 116902173 MODEL JAAIVD010000023;XM_032904515;XM_032904516;XM_032904518 XP_032760406;XP_032760407;XP_032760409 phosphatidylinositol glycan anchor biosynthesis class U protein protein-coding 625923793 Dab2 DAB adaptor protein 2 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); cargo receptor activity (ortholog); clathrin adaptor activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); metabolic acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); clathrin coat of coated pit (ortholog); clathrin-coated pit (ortholog) 3 174928625 174981571 + 30032202 116897149 MODEL JAAIVD010000012;XM_032898817 XP_032754708 disabled homolog 2 protein-coding 625923812 Rpl18 ribosomal protein L18 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 18 (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 2 153800281 153803069 - 22301074;30032202 116892129 MODEL JAAIVD010000001;XM_032893616 XP_032749507 60S ribosomal protein L18 protein-coding 625923822 LOC116884088 small nucleolar RNA SNORA17 14 43343990 43344101 - 116884088 MODEL JAAIVD010000009 pseudo 625923823 Cnot10 CCR4-NOT transcription complex subunit 10 PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog) 8 105194140 105243645 - 22301074;30032202 116907818 MODEL JAAIVD010000027;XM_032910996;XM_032910997;XM_032910998;XM_032910999;XM_032911000;XM_032911001 XP_032766887;XP_032766888;XP_032766889;XP_032766890;XP_032766891;XP_032766892 protein-coding 625923856 LOC116898167 60S ribosomal protein L12-like 4 123846604 123847129 + 116898167 MODEL JAAIVD010000003 pseudo 625923857 Ppp1r11 protein phosphatase 1 regulatory inhibitor subunit 11 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cytokine production (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 18 9926108 9929653 - 22301074;30032202 116887715 MODEL JAAIVD010000013;XM_032889313 XP_032745204 E3 ubiquitin-protein ligase PPP1R11 protein-coding 625923864 LOC116894741 U1 small nuclear ribonucleoprotein C-like 2 111312981 111313689 - 116894741 MODEL JAAIVD010000001 pseudo 625923865 Prlr prolactin receptor ENCODES a protein that exhibits lipid binding (ortholog); peptide hormone binding (ortholog); prolactin receptor activity (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); activation of transmembrane receptor protein tyrosine kinase activity (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autistic disorder (ortholog); carcinoma (ortholog); FOUND IN cell surface (ortholog) 3 170375333 170544420 - 22301074;30032202 116897129 MODEL JAAIVD010000012;XM_032898785;XM_032898787;XM_032898788;XM_032898789;XM_032898790 XP_032754676;XP_032754678;XP_032754679;XP_032754680;XP_032754681 protein-coding 625923891 LOC116887356 olfactory receptor 14J1-like 18 10820772 10821773 - 22301074;30032202 116887356 MODEL JAAIVD010000013;XM_032888951 XP_032744842 protein-coding 625923894 Alx3 ALX homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic forelimb morphogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH frontonasal dysplasia (ortholog); frontonasal dysplasia 1 (ortholog); genetic disease (ortholog) 3 50655263 50665816 - 22301074;30032202 116895364 MODEL JAAIVD010000012;XM_032896661 XP_032752552 homeobox protein aristaless-like 3 protein-coding 625923902 LOC116898491 aspartate aminotransferase, mitochondrial-like 4 121732780 121741068 + 116898491 MODEL JAAIVD010000003 pseudo 625923903 LOC116907608 olfactory receptor 8D2-like 8 32620987 32621922 + 22301074;30032202 116907608 MODEL JAAIVD010000027;XM_032910663 XP_032766554 protein-coding 625923907 Tbc1d4 TBC1 domain family member 4 INVOLVED IN cellular response to insulin stimulus (ortholog); negative regulation of vesicle fusion (ortholog); vesicle-mediated transport (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); Congenital Hyperinsulinism (ortholog); Insulin Resistance (ortholog); FOUND IN cytosol (ortholog); vesicle (ortholog) 12 22978594 23166155 + 116913440 MODEL JAAIVD010000007;XM_032917640 XP_032773531 protein-coding 625923930 LOC116899832 small Cajal body-specific RNA 6 4 159890895 159891163 + 116899832 MODEL JAAIVD010000003;XR_004387831 ncrna 625923933 Kctd1 potassium channel tetramerization domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Familial Cirrhosis (ortholog); scalp-ear-nipple syndrome (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 15 28783714 28877050 + 22301074;30032202 116884490 MODEL JAAIVD010000010;XM_032885611;XM_032885612 XP_032741502;XP_032741503 BTB/POZ domain-containing protein KCTD1 protein-coding 625923945 Gbf1 golgi brefeldin A resistant guanine nucleotide exchange factor 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cell activation involved in immune response (ortholog); COPI coating of Golgi vesicle (ortholog); endoplasmic reticulum-Golgi intermediate compartment organization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH axonal neuropathy (ortholog); cataract 11 multiple types (ortholog); Charcot-Marie-Tooth disease dominant intermediate A (ortholog); FOUND IN cell leading edge (ortholog); cis-Golgi network (ortholog); cytosol (ortholog) 2 45619080 45747997 + 22301074 116891239 MODEL JAAIVD010000001;XM_032892102;XM_032892103;XM_032892104;XM_032892106;XM_032892107 XP_032747993;XP_032747994;XP_032747995;XP_032747997;XP_032747998 Golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1 protein-coding 625924002 Dpy19l4 dpy-19 like 4 1 132388476 132444349 + 30032202 116903409 MODEL JAAIVD010000025;XM_032905927 XP_032761818 probable C-mannosyltransferase DPY19L4 protein-coding 625924025 Znf462 zinc finger protein 462 INVOLVED IN chromatin organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Breast Cancer, Familial (ortholog); cleft lip (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 96440707 96571616 - 30032202 116901762 MODEL JAAIVD010000025;XM_032903902 XP_032759793 protein-coding 625924042 Tnfaip8l1 TNF alpha induced protein 8 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of TOR signaling (ortholog); FOUND IN cytoplasm (ortholog) 4 87549509 87559834 + 22301074;30032202 116899173 MODEL JAAIVD010000003;XM_032900744;XM_032900745 XP_032756635;XP_032756636 tumor necrosis factor alpha-induced protein 8-like protein 1 protein-coding 625924051 LOC116892784 fatty acid-binding protein 5-like 2 21799855 21800320 - 116892784 MODEL JAAIVD010000001 pseudo 625924052 Isyna1 inositol-3-phosphate synthase 1 ENCODES a protein that exhibits inositol-3-phosphate synthase activity (ortholog); INVOLVED IN inositol biosynthetic process (ortholog); negative regulation of inositol biosynthetic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); polycystic ovary syndrome (ortholog) 13 12841071 12843978 + 22301074;30032202 116914765 MODEL JAAIVD010000008;XM_032919214 XP_032775105 protein-coding 625924067 Fam161b FAM161 centrosomal protein B FOUND IN cytoplasmic microtubule (ortholog); microtubule cytoskeleton (ortholog) 7 98449841 98465249 - 30032202 116906159 MODEL JAAIVD010000026;XM_032909141 XP_032765032 protein FAM161B protein-coding 625924079 Tmem19 transmembrane protein 19 ASSOCIATED WITH basal cell carcinoma (ortholog) 1 193500646 193526767 - 22301074;30032202 116909024 MODEL JAAIVD010000025;XM_032912504;XM_032912512;XM_032912519 XP_032768395;XP_032768403;XP_032768410 protein-coding 625924096 Spink13 serine peptidase inhibitor Kazal type 13 INVOLVED IN negative regulation of acrosome reaction (ortholog) X 6562169 6567821 + 22301074 116888235 MODEL JAAIVD010000014;XM_032889526 XP_032745417 serine protease inhibitor Kazal-type 13 protein-coding 625924104 Plagl2 PLAG1 like zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chylomicron assembly (ortholog); lipid metabolic process (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); FOUND IN nucleus (ortholog) 5 132544629 132557838 - 30032202 116902140 MODEL JAAIVD010000023;XM_032904467 XP_032760358 zinc finger protein PLAGL2 protein-coding 625924111 LOC116902598 small nucleolar RNA SNORA17 5 44774086 44774217 + 116902598 MODEL JAAIVD010000023;XR_004388187 snorna 625924114 Map3k2 mitogen-activated protein kinase kinase kinase 2 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); intracellular signal transduction (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; Erk5 MAPK signaling pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 15 11999349 12031587 - 22301074 116884983 MODEL JAAIVD010000010;XM_032886202 XP_032742093 protein-coding 625924133 Tmem125 transmembrane protein 125 1 38497010 38499607 + 116897767 MODEL JAAIVD010000025;XM_032899200 XP_032755091 protein-coding 625924139 Ncoa7 nuclear receptor coactivator 7 ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 2 204707318 204859470 - 30032202 116892927 MODEL JAAIVD010000001;XM_032894858;XM_032894859;XM_032894860;XM_032894861;XM_032894862;XM_032894863 XP_032750749;XP_032750750;XP_032750751;XP_032750752;XP_032750753;XP_032750754 protein-coding 625924174 Slfn11 schlafen family member 11 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); RNA endonuclease activity (ortholog); tRNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); defense response to virus (ortholog); DNA damage response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 87524685 87536460 + 30032202 116908546 MODEL JAAIVD010000002;XM_032911746 XP_032767637 protein-coding 625924182 LOC116904264 histone-lysine N-methyltransferase SETMAR-like 6 38746363 38757665 - 116904264 MODEL JAAIVD010000024 pseudo 625924183 LOC116887829 nucleoside diphosphate kinase A-like X 36198136 36214993 + 116887829 MODEL JAAIVD010000014 pseudo 625924184 Fam184b family with sequence similarity 184 member B ASSOCIATED WITH substance-related disorder (ortholog) 11 60237602 60353064 + 116912445 MODEL JAAIVD010000006;XM_032916513 XP_032772404 protein FAM184B protein-coding 625924204 LOC116894629 small nuclear ribonucleoprotein Sm D3-like 2 188945263 188945789 - 22301074;30032202 116894629 MODEL JAAIVD010000001;XM_032896347 XP_032752238 protein-coding 625924209 LOC116900048 nucleoside diphosphate kinase B-like 5 14931811 15126028 + 116900048 MODEL JAAIVD010000023 pseudo 625924210 LOC116886331 Krueppel-like factor 4 1 14619735 14621881 - 116886331 MODEL JAAIVD010000025 pseudo 625924211 LOC116897883 ribosomal oxygenase 2-like 4 29662294 29663671 - 116897883 MODEL JAAIVD010000003 pseudo 625924212 Plpp2 phospholipid phosphatase 2 ENCODES a protein that exhibits ceramide-1-phosphate phosphatase activity (ortholog); phosphatidate phosphatase activity (ortholog); sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN ceramide metabolic process (ortholog); phospholipid dephosphorylation (ortholog); phospholipid metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN caveola (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 1 155341851 155349845 + 30032202 116905795 MODEL JAAIVD010000025;XM_032908772 XP_032764663 protein-coding 625924222 LOC116905645 40S ribosomal protein S15a-like 7 5422959 5423339 - 22301074;30032202 116905645 MODEL JAAIVD010000026;XM_032908620 XP_032764511 protein-coding 625924225 Sdad1 SDA1 domain containing 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 11 5134364 5161255 - 30032202 116912529 MODEL JAAIVD010000006;XM_032916628 XP_032772519 protein SDA1 homolog protein-coding 625924250 LOC116896771 transmembrane protein 258-like 3 74764183 74764410 - 22301074;30032202 116896771 MODEL JAAIVD010000012;XM_032898229 XP_032754120 protein-coding 625924253 LOC116888114 homeobox protein Rhox13-like X 101469924 101476390 + 30032202 116888114 MODEL JAAIVD010000014;XM_032889468 XP_032745359 protein-coding 625924258 LOC116889432 U6 spliceosomal RNA X 71185960 71186067 + 116889432 MODEL JAAIVD010000014;XR_004386394 snrna 625924261 LOC116887707 class I histocompatibility antigen, Gogo-A*0101 alpha chain-like 18 9646550 9648835 + 30032202 116887707 MODEL JAAIVD010000013;XM_032889307 XP_032745198 protein-coding 625924269 LOC116883179 uncharacterized LOC116883179 14 75283782 75285232 + 116883179 MODEL JAAIVD010000009;XR_004385732 ncrna 625924273 Pkd1l1 polycystin 1 like 1, transient receptor potential channel interacting INVOLVED IN detection of nodal flow (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital chylothorax (ortholog); genetic disease (ortholog); FOUND IN calcium channel complex (ortholog); ciliary membrane (ortholog); cilium (ortholog) 11 77866738 78043077 - 22301074;30032202 116912036 MODEL JAAIVD010000006;XM_032915919 XP_032771810 polycystic kidney disease protein 1-like 1 protein-coding 625924330 LOC116911623 glyceraldehyde-3-phosphate dehydrogenase-like 10 30594418 30601129 + 116911623 MODEL JAAIVD010000005 pseudo 625924331 Cep192 centrosomal protein 192 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN centrosome-templated microtubule nucleation (ortholog); mitotic spindle assembly (ortholog); protein localization to centrosome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 15 63384285 63467028 - 30032202 116885015 MODEL JAAIVD010000010;XM_032886256 XP_032742147 centrosomal protein of 192 kDa protein-coding 625924379 Serpine2 serpin family E member 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood coagulation (ortholog); cerebellar granular layer morphogenesis (ortholog); dense core granule biogenesis (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); brain edema (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 4 152852977 152916762 - 30032202 116899553 MODEL JAAIVD010000003;XM_032901447 XP_032757338 glia-derived nexin protein-coding 625924392 Wnk1 WNK lysine deficient protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular response to calcium ion (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) 6 26698182 26822592 + 22301074;30032202 116903336 MODEL JAAIVD010000024;XM_032905780;XM_032905781;XM_032905783;XM_032905784 XP_032761671;XP_032761672;XP_032761674;XP_032761675 serine/threonine-protein kinase WNK1 protein-coding 625924431 Lamc1 laminin subunit gamma 1 ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); chromatin organization (ortholog); ASSOCIATED WITH aortic disease (ortholog); COVID-19 (ortholog); Gliosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); laminin-1 complex (ortholog) 10 32695130 32816269 - 30032202 116911769 MODEL JAAIVD010000005;XM_032915763 XP_032771654 laminin subunit gamma-1 protein-coding 625924463 Tafa2 TAFA chemokine like family member 2 INVOLVED IN memory (ortholog); visual learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 201710981 202175250 + 30032202 116909652 MODEL JAAIVD010000025;XM_032913308;XM_032913314;XM_032913322;XM_032913330 XP_032769199;XP_032769205;XP_032769213;XP_032769221 chemokine-like protein TAFA-2 protein-coding 625924483 Ing3 inhibitor of growth family member 3 ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 6 117200001 117226619 - 30032202 116904046 MODEL JAAIVD010000024;XM_032906904;XM_032906905;XM_032906906 XP_032762795;XP_032762796;XP_032762797 inhibitor of growth protein 3 protein-coding 625924502 Pex7 peroxisomal biogenesis factor 7 ENCODES a protein that exhibits enzyme binding (ortholog); peroxisome matrix targeting signal-2 binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endochondral ossification (ortholog); ether lipid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) 2 216683526 216742032 + 22301074;30032202 116892977 MODEL JAAIVD010000001;XM_032894936 XP_032750827 protein-coding 625924516 LOC116900294 olfactory receptor 8K3-like 5 63661017 63661958 - 22301074;30032202 116900294 MODEL JAAIVD010000023;XM_032902050 XP_032757941 protein-coding 625924519 Septin2 septin 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); neuron projection development (ortholog); regulation of L-glutamate import across plasma membrane (ortholog); ASSOCIATED WITH methylmalonic acidemia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cell projection (ortholog) 4 165410785 165444069 + 22301074;30032202 116899666 MODEL JAAIVD010000003;XM_032901680;XM_032901681 XP_032757571;XP_032757572 septin-2 protein-coding 625924539 Arhgef16 Rho guanine nucleotide exchange factor 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cell chemotaxis (ortholog); positive regulation of protein localization to plasma membrane (ortholog) 1 6426293 6441688 + 22301074;30032202 116892118 MODEL JAAIVD010000025;XM_032893604;XM_032893612 XP_032749495;XP_032749503 protein-coding 625924563 LOC116890568 small nucleolar RNA SNORA17 1 160173236 160173357 + 116890568 MODEL JAAIVD010000025 pseudo 625924564 LOC116884884 high mobility group protein B1-like 15 33366585 33375750 + 116884884 MODEL JAAIVD010000010 pseudo 625924565 LOC116892504 kinectin-like 1 62504880 62516569 + 116892504 MODEL JAAIVD010000025 pseudo 625924566 Thop1 thimet oligopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); peptide catabolic process (ortholog); peptide metabolic process (ortholog) 1 153807071 153819320 - 22301074;30032202 116904592 MODEL JAAIVD010000025;XM_032907391 XP_032763282 thimet oligopeptidase protein-coding 625924582 LOC116897403 U1 spliceosomal RNA 3 60840322 60840486 - 116897403 MODEL JAAIVD010000012;XR_004387446 snrna 625924585 Gtpbp6 GTP binding protein 6 FOUND IN mitochondrion (ortholog) 16 44253464 44257451 + 22301074;30032202 116885160 MODEL JAAIVD010000004;XM_032886371 XP_032742262 GTP binding protein 6 (putative);putative GTP-binding protein 6 protein-coding 625924599 LOC116883871 prolactin-7A2-like 14 46708494 46716769 - 22301074;30032202 116883871 MODEL JAAIVD010000009;XM_032885137 XP_032741028 protein-coding 625924609 LOC116898092 cytochrome b-c1 complex subunit 7-like 4 95307468 95307964 - 116898092 MODEL JAAIVD010000003 pseudo 625924610 Axin1 axin 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN axial mesoderm development (ortholog); axial mesoderm formation (ortholog); beta-catenin destruction complex assembly (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; N-cadherin signaling pathway; ASSOCIATED WITH Caudal Duplication Anomaly (ortholog); colon cancer (ortholog); CRANIOMETADIAPHYSEAL OSTEOSCLEROSIS WITH HIP DYSPLASIA (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cell cortex (ortholog); cell periphery (ortholog) 9 3400823 3455972 + 30032202 116910556 MODEL JAAIVD010000002;XM_032914465;XM_032914466;XM_032914467 XP_032770356;XP_032770357;XP_032770358 axin-1 protein-coding 625924629 LOC116911423 sphingolipid delta(4)-desaturase DES1-like 10 59425817 59432858 + 22301074;30032202 116911423 MODEL JAAIVD010000005;XM_032915389 XP_032771280 protein-coding 625924634 LOC116895852 40S ribosomal protein S6-like 3 90107550 90108274 + 116895852 MODEL JAAIVD010000012 pseudo 625924635 LOC116900178 heterogeneous nuclear ribonucleoprotein K-like 5 33792860 33794233 - 116900178 MODEL JAAIVD010000023 pseudo 625924636 LOC116910350 CMRF35-like molecule 3 9 69101128 69110083 + 30032202 116910350 MODEL JAAIVD010000002;XM_032914205 XP_032770096 protein-coding 625924643 LOC116889449 U6 spliceosomal RNA X 65853920 65854022 - 116889449 MODEL JAAIVD010000014;XR_004386407 snrna 625924646 Tcea1 transcription elongation factor A1 INVOLVED IN erythrocyte differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of exoribonuclease activity (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); transcription factor TFIID complex (ortholog) 1 140221586 140258669 + 22301074;30032202 116903712 MODEL JAAIVD010000025;XM_032906391;XM_032906398 XP_032762282;XP_032762289 transcription elongation factor A protein 1 protein-coding 625924663 LOC116906040 aldo-keto reductase family 1 member B1-like 7 41899911 41905894 + 116906040 MODEL JAAIVD010000026 pseudo 625924664 LOC116913554 uncharacterized LOC116913554 12 2521647 2523496 + 116913554 MODEL JAAIVD010000007;XR_004389630 ncrna 625924668 LOC116900862 olfactory receptor 1052-like 5 64198797 64199616 - 116900862 MODEL JAAIVD010000023 pseudo 625924669 Arfgap1 ARF GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); regulation of endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); nervous system disease (ortholog); FOUND IN Golgi membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) 5 158074427 158089957 + 22301074;30032202 116902425 MODEL JAAIVD010000023;XM_032904955 XP_032760846 ADP ribosylation factor GTPase activating protein 1;ADP-ribosylation factor GTPase-activating protein 1 protein-coding 625924688 LOC116884354 developmental pluripotency-associated protein 4-like 15 37167919 37171504 - 116884354 MODEL JAAIVD010000010 pseudo 625924689 Pabpc5 poly(A) binding protein cytoplasmic 5 FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog) X 49469182 49471170 - 22301074;30032202 116889246 MODEL JAAIVD010000014;XM_032890400 XP_032746291 polyadenylate-binding protein 5 protein-coding 625924695 LOC116908576 uncharacterized LOC116908576 9 2646841 2649128 + 116908576 MODEL JAAIVD010000002;XR_004388997;XR_004388998 ncrna 625924703 Bard1 BRCA1 associated RING domain 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) 4 144480608 144545664 - 22301074 116898537 MODEL JAAIVD010000003;XM_032899756 XP_032755647 BRCA1-associated RING domain protein 1 protein-coding 625924716 Ino80d INO80 complex subunit D INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog) 4 137042908 137100398 - 30032202 116899442 MODEL JAAIVD010000003;XM_032901199;XM_032901200;XM_032901201;XM_032901202;XM_032901204;XM_032901205;XM_032901206;XM_032901207;XM_032901208;XM_032901209;XM_032901210;XM_032901211;XM_032901212 XP_032757090;XP_032757091;XP_032757092;XP_032757093;XP_032757095;XP_032757096;XP_032757097;XP_032757098;XP_032757099;XP_032757100;XP_032757101;XP_032757102;XP_032757103 protein-coding 625924764 Prkd3 protein kinase D3 ENCODES a protein that exhibits kinase activity (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 14215751 14282932 + 22301074;30032202 116905893 MODEL JAAIVD010000026;XM_032908881 XP_032764772 serine/threonine-protein kinase D3 protein-coding 625924786 Eif5a2 eukaryotic translation initiation factor 5A2 ASSOCIATED WITH Premature Aging (ortholog) 3 125878857 125894558 - 22301074;30032202 116896984 MODEL JAAIVD010000012;XM_032898574;XM_032898575 XP_032754465;XP_032754466 eukaryotic translation initiation factor 5A-2 protein-coding 625924801 Comp cartilage oligomeric matrix protein ENCODES a protein that exhibits BMP binding (ortholog); calcium ion binding (ortholog); collagen binding (ortholog); INVOLVED IN apoptotic process (ortholog); artery morphogenesis (ortholog); blood coagulation (ortholog); ASSOCIATED WITH carpal tunnel syndrome 2 (ortholog); connective tissue disease (ortholog); genetic disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); extracellular space (ortholog) 13 12631320 12639397 + 22301074 116914259 MODEL JAAIVD010000008;XM_032918471 XP_032774362 protein-coding 625924823 LOC116900476 olfactory receptor 4C46-like 5 71539668 71540603 + 22301074 116900476 MODEL JAAIVD010000023;XM_032902212 XP_032758103 protein-coding 625924826 Ahsg alpha 2-HS glycoprotein ENCODES a protein that exhibits receptor signaling protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); alopecia-mental retardation syndrome 1 (ortholog); calcinosis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 4 7573204 7579681 + 22301074;30032202 116898723 MODEL JAAIVD010000003;XM_032900021;XM_032900022;XM_032900023;XM_032900024;XM_032900025 XP_032755912;XP_032755913;XP_032755914;XP_032755915;XP_032755916 alpha-2-HS-glycoprotein protein-coding 625924851 Mdfi MyoD family inhibitor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN dorsal/ventral axis specification (ortholog); embryonic skeletal system morphogenesis (ortholog); maintenance of protein location in cell (ortholog); FOUND IN nucleus (ortholog) 4 82043222 82061342 + 116898038 MODEL JAAIVD010000003;XM_032899429;XM_032899430;XM_032899431 XP_032755320;XP_032755321;XP_032755322 protein-coding 625924870 LOC116887670 40S ribosomal protein SA-like 1 53797166 53798018 + 116887670 MODEL JAAIVD010000025 pseudo 625924871 LOC116890364 U6 spliceosomal RNA 1 40142311 40142414 + 116890364 MODEL JAAIVD010000025;XR_004386582 snrna 625924874 LOC116900933 40S ribosomal protein S8-like 5 80742974 80754181 - 116900933 MODEL JAAIVD010000023 pseudo 625924875 LOC116899229 sulfotransferase 1C2-like 4 90951574 90967344 + 22301074;30032202 116899229 MODEL JAAIVD010000003;XM_032900829 XP_032756720 protein-coding 625924888 Txndc11 thioredoxin domain containing 11 9 11196075 11251281 + 116910396 MODEL JAAIVD010000002;XM_032914235;XM_032914236 XP_032770126;XP_032770127 thioredoxin domain-containing protein 11 protein-coding 625924906 H1-2 H1.2 linker histone, cluster member ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); facultative heterochromatin formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) 14 42732674 42734152 + 22301074 116883558 MODEL JAAIVD010000009;XM_032884738 XP_032740629 histone H1.2 protein-coding 625924911 Dclk1 doublecortin like kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN axon extension (ortholog); axonogenesis (ortholog); brain development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) 3 98908664 99197469 - 22301074;30032202 116896861 MODEL JAAIVD010000012;XM_032898371;XM_032898372;XM_032898373;XM_032898374;XM_032898375;XM_032898376;XM_032898378;XM_032898379;XM_032898380;XM_032898381;XM_032898382;XM_032898383 XP_032754262;XP_032754263;XP_032754264;XP_032754265;XP_032754266;XP_032754267;XP_032754269;XP_032754270;XP_032754271;XP_032754272;XP_032754273;XP_032754274 serine/threonine-protein kinase DCLK1 protein-coding 625924972 LOC116914086 uncharacterized LOC116914086 12 2780541 2782931 + 116914086 MODEL JAAIVD010000007;XR_004389665 ncrna 625924976 Tspan15 tetraspanin 15 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); cytosol (ortholog) 18 28011214 28055518 - 22301074;30032202 116887190 MODEL JAAIVD010000013;XM_032888744 XP_032744635 tetraspanin-15 protein-coding 625924988 Atp6v1g3 ATPase H+ transporting V1 subunit G3 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 10 18635875 18650264 + 22301074;30032202 116911681 MODEL JAAIVD010000005;XM_032915634 XP_032771525 V-type proton ATPase subunit G 3 protein-coding 625924995 Cpb1 carboxypeptidase B1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 3 133859247 133891322 + 22301074;30032202 116895566 MODEL JAAIVD010000012;XM_032896799 XP_032752690 carboxypeptidase B protein-coding 625925010 LOC116895180 N-alpha-acetyltransferase 11-like 3 146742479 146743303 - 116895180 MODEL JAAIVD010000012 pseudo 625925011 LOC116911080 uncharacterized LOC116911080 10 72959400 72959780 - 116911080 MODEL JAAIVD010000005;XR_004389310 ncrna 625925015 LOC116906493 small nucleolar RNA U54 7 72894961 72895028 + 116906493 MODEL JAAIVD010000026;XR_004388735 snorna 625925018 Med13 mediator complex subunit 13 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 13 (ortholog); FOUND IN CKM complex (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 9 84417434 84503302 + 22301074;30032202 116909358 MODEL JAAIVD010000002;XM_032912906 XP_032768797 mediator of RNA polymerase II transcription subunit 13 protein-coding 625925052 LOC116901089 putative uncharacterized protein FLJ40606 5 153079479 153079928 + 116901089 MODEL JAAIVD010000023;XM_032902653 XP_032758544 protein-coding 625925055 Mrpl51 mitochondrial ribosomal protein L51 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 6 22707401 22708622 - 22301074;30032202 116903255 MODEL JAAIVD010000024;XM_032905637 XP_032761528 39S ribosomal protein L51, mitochondrial protein-coding 625925062 Znf362 zinc finger protein 362 1 29329547 29363699 + 116896359 MODEL JAAIVD010000025;XM_032897470;XM_032897480;XM_032897489;XM_032897496 XP_032753361;XP_032753371;XP_032753380;XP_032753387 protein-coding 625925084 LOC116889456 U6 spliceosomal RNA X 80225768 80225878 + 116889456 MODEL JAAIVD010000014;XR_004386413 snrna 625925087 LOC116913177 60S ribosomal protein L6-like 12 57291297 57292332 - 116913177 MODEL JAAIVD010000007 pseudo 625925088 Ccer1 coiled-coil glutamate rich protein 1 INVOLVED IN sperm DNA condensation (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 1 176888319 176890073 + 116889997 MODEL JAAIVD010000025;XM_032890783 XP_032746674 coiled-coil domain-containing glutamate-rich protein 1 protein-coding 625925093 Lrrtm3 leucine rich repeat transmembrane neuronal 3 INVOLVED IN positive regulation of amyloid-beta formation (ortholog); positive regulation of synapse assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 18 22626081 22798641 + 22301074;30032202 116886936 MODEL JAAIVD010000013;XM_032888433 XP_032744324 leucine-rich repeat transmembrane neuronal protein 3 protein-coding 625925100 LOC116887855 uncharacterized protein C6orf136 homolog X 43693488 43698480 - 116887855 MODEL JAAIVD010000014 pseudo 625925101 M6pr mannose-6-phosphate receptor, cation dependent ENCODES a protein that exhibits retromer complex binding (ortholog); INVOLVED IN lysosomal transport (ortholog); secretion of lysosomal enzymes (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Prostatic Neoplasms (ortholog); renal cell carcinoma (ortholog); FOUND IN endosome (ortholog); late endosome (ortholog); perinuclear region of cytoplasm (ortholog) 6 24790087 24799047 - 22301074;30032202 116903313 MODEL JAAIVD010000024;XM_032905747;XM_032905748 XP_032761638;XP_032761639 cation-dependent mannose-6-phosphate receptor protein-coding 625925115 LOC116884835 uncharacterized LOC116884835 15 13540073 13543200 + 116884835 MODEL JAAIVD010000010;XR_004385902 ncrna 625925120 LOC116890998 myotubularin-related protein 6 2 12910643 12912884 - 22301074;30032202 116890998 MODEL JAAIVD010000001;XM_032891676 XP_032747567 protein-coding 625925125 Dbx2 developing brain homeobox 2 INVOLVED IN epidermal growth factor receptor signaling pathway (ortholog); G2/M transition of mitotic cell cycle (ortholog); gene expression (ortholog) 1 268469308 268498942 - 22301074;30032202 116884361 MODEL JAAIVD010000025;XM_032885489 XP_032741380 homeobox protein DBX2 protein-coding 625925132 Sirt6 sirtuin 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cardiac muscle cell differentiation (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Cardiotoxicity (ortholog); endomyocardial fibrosis (ortholog); FOUND IN chromatin (ortholog); chromosome, subtelomeric region (ortholog); endoplasmic reticulum (ortholog) 1 153262840 153268176 + 22301074 116904169 MODEL JAAIVD010000025;XM_032907074;XM_032907083 XP_032762965;XP_032762974 NAD-dependent protein deacetylase sirtuin-6 protein-coding 625925147 Ddc dopa decarboxylase ENCODES a protein that exhibits 5-hydroxy-L-tryptophan decarboxylase activity (ortholog); amino acid binding (ortholog); aromatic-L-amino-acid decarboxylase activity (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to alkaloid (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; ASSOCIATED WITH aromatic L-amino acid decarboxylase deficiency (ortholog); bipolar disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 11 80731189 80847449 - 22301074;30032202 116912430 MODEL JAAIVD010000006;XM_032916495;XM_032916496;XM_032916497 XP_032772386;XP_032772387;XP_032772388 aromatic-L-amino-acid decarboxylase protein-coding 625925174 LOC116910204 T-cell immunoglobulin and mucin domain-containing protein 4-like 9 29578414 29612581 + 116910204 MODEL JAAIVD010000002;XM_032914067 XP_032769958 protein-coding 625925185 LOC116890462 small nucleolar RNA SNORA5 1 95175989 95176073 + 116890462 MODEL JAAIVD010000025;XR_004386654 snorna 625925188 Paip2b poly(A) binding protein interacting protein 2B ENCODES a protein that exhibits mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN negative regulation of translational initiation (ortholog) 6 62401326 62438031 + 30032202 116904322 MODEL JAAIVD010000024;XM_032907230 XP_032763121 polyadenylate-binding protein-interacting protein 2B protein-coding 625925198 Slc25a44 solute carrier family 25 member 44 ENCODES a protein that exhibits branched-chain amino acid transmembrane transporter activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); branched-chain amino acid transport (ortholog); regulation of cold-induced thermogenesis (ortholog); FOUND IN mitochondrion (ortholog) 3 65138604 65151593 + 22301074;30032202 116896687 MODEL JAAIVD010000012;XM_032898074;XM_032898075;XM_032898076 XP_032753965;XP_032753966;XP_032753967 protein-coding 625925212 LOC116914156 U6atac minor spliceosomal RNA 12 1216171 1216298 - 116914156 MODEL JAAIVD010000007;XR_004389706 snrna 625925215 LOC116902877 anionic trypsin-1 6 99122416 99127129 - 22301074;30032202 116902877 MODEL JAAIVD010000024;XM_032905208 XP_032761099 protein-coding 625925224 Dctn2 dynactin subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); spectrin binding (ortholog); INVOLVED IN melanosome transport (ortholog); mitotic metaphase chromosome alignment (ortholog); mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); synucleinopathy (ortholog); FOUND IN centrosome (ortholog); dynactin complex (ortholog); growth cone (ortholog) 1 205701554 205716732 + 22301074;30032202 116909967 MODEL JAAIVD010000025;XM_032913746;XM_032913753;XM_032913762 XP_032769637;XP_032769644;XP_032769653 protein-coding 625925248 Psmd12 proteasome 26S subunit, non-ATPase 12 ASSOCIATED WITH contact dermatitis (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 9 71623413 71641817 - 30032202 116908910 MODEL JAAIVD010000002;XM_032912364 XP_032768255 26S proteasome non-ATPase regulatory subunit 12 protein-coding 625925263 Jak1 Janus kinase 1 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interleukin-3 (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-2 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 1 53283387 53390176 + 22301074;30032202 116899721 MODEL JAAIVD010000025;XM_032901765 XP_032757656 tyrosine-protein kinase JAK1 protein-coding 625925292 LOC116906490 small nucleolar RNA U13 7 82418292 82418398 + 116906490 MODEL JAAIVD010000026;XR_004388733 snorna 625925295 Mrps2 mitochondrial ribosomal protein S2 INVOLVED IN mitochondrial ribosome assembly (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 36 (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 5 8198419 8201637 - 22301074;30032202 116901231 MODEL JAAIVD010000023;XM_032902968 XP_032758859 28S ribosomal protein S2, mitochondrial protein-coding 625925303 Cep85 centrosomal protein 85 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); centriole assembly (ortholog); centriole replication (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) 1 24062541 24110810 + 30032202 116894829 MODEL JAAIVD010000025;XM_032896497;XM_032896498 XP_032752388;XP_032752389 centrosomal protein of 85 kDa protein-coding 625925324 Nadk NAD kinase ENCODES a protein that exhibits NAD+ kinase activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide metabolic pathway; FOUND IN cytosol (ortholog) 1 5109201 5136666 - 22301074;30032202 116891895 MODEL JAAIVD010000025;XM_032893314;XM_032893322 XP_032749205;XP_032749213 protein-coding 625925343 Tex44 testis expressed 44 FOUND IN cytoplasm (ortholog) 4 158560553 158561965 + 116898251 MODEL JAAIVD010000003;XM_032899602 XP_032755493 testis-expressed protein 44 protein-coding 625925348 Foxk2 forkhead box K2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical glycolysis (ortholog); intracellular glucose homeostasis (ortholog); negative regulation of autophagy (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 62708782 62758991 - 22301074;30032202 116908559 MODEL JAAIVD010000002;XM_032911764 XP_032767655 forkhead box protein K2 protein-coding 625925361 Prkdc protein kinase, DNA-activated, catalytic subunit ENCODES a protein that exhibits DNA-dependent protein kinase activity (ortholog); double-stranded DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); B cell lineage commitment (ortholog); brain development (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); DNA-dependent protein kinase complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) 4 986537 1186900 + 22301074;30032202 116898606 MODEL JAAIVD010000003;XM_032899802 XP_032755693 DNA-dependent protein kinase catalytic subunit protein-coding 625925451 LOC116905777 60S ribosomal protein L27a-like 7 32671640 32672076 - 116905777 MODEL JAAIVD010000026 pseudo 625925452 LOC116906124 60S ribosomal protein L15-like 7 85447437 85448047 - 116906124 MODEL JAAIVD010000026 pseudo 625925453 Tnni2 troponin I2, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); troponin T binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); relaxation of skeletal muscle (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); distal arthrogryposis (ortholog); distal arthrogryposis type 2B (ortholog); FOUND IN nucleus (ortholog); troponin complex (ortholog) 2 7032089 7034706 - 22301074;30032202 116893617 MODEL JAAIVD010000001;XM_032895331 XP_032751222 troponin I, fast skeletal muscle protein-coding 625925465 Knstrn kinetochore localized astrin (SPAG5) binding protein ENCODES a protein that exhibits microtubule plus-end binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH actinic keratosis (ortholog); COVID-19 (ortholog); Roifman-Chitayat Syndrome (ortholog); FOUND IN centriolar satellite (ortholog); kinetochore (ortholog); microtubule organizing center (ortholog) 5 96989743 97009109 + 30032202 116901789 MODEL JAAIVD010000023;XM_032903937 XP_032759828 small kinetochore-associated protein protein-coding 625925477 LOC116893490 vomeronasal type-1 receptor 4-like 2 182479389 182480312 - 22301074;30032202 116893490 MODEL JAAIVD010000001;XM_032895237 XP_032751128 protein-coding 625925480 Nelfe negative elongation factor complex member E ENCODES a protein that exhibits chromatin binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN chromatin (ortholog); NELF complex (ortholog); nuclear body (ortholog) 18 7442750 7448449 + 30032202 116887318 MODEL JAAIVD010000013;XM_032888907;XM_032888908;XM_032888909;XM_032888911 XP_032744798;XP_032744799;XP_032744800;XP_032744802 negative elongation factor E protein-coding 625925502 LOC116902066 uncharacterized LOC116902066 5 126564478 126565871 + 116902066 MODEL JAAIVD010000023;XR_004388037 ncrna 625925506 LOC116893313 protein SET-like 2 152141309 152144366 + 116893313 MODEL JAAIVD010000001 pseudo 625925507 LOC116887631 protein ILRUN-like 18 10579490 10580149 + 116887631 MODEL JAAIVD010000013 pseudo 625925508 LOC116886407 lysophosphatidylcholine acyltransferase 2 17 18567126 18576585 - 22301074;30032202 116886407 MODEL JAAIVD010000011;XM_032887881 XP_032743772 protein-coding 625925516 LOC116891098 renalase 2 33427229 33429932 - 30032202 116891098 MODEL JAAIVD010000001;XM_032891812 XP_032747703 protein-coding 625925524 LOC116910648 U6 spliceosomal RNA 9 90805035 90805137 + 116910648 MODEL JAAIVD010000002;XR_004389184 snrna 625925527 Znf518a zinc finger protein 518A 2 40036920 40042993 + 30032202 116891156 MODEL JAAIVD010000001;XM_032891948 XP_032747839 protein-coding 625925532 LOC116883588 uncharacterized LOC116883588 14 42549282 42553325 - 116883588 MODEL JAAIVD010000009;XR_004385773 ncrna 625925536 LOC116891706 60S ribosomal protein L35-like 2 96035446 96035848 + 116891706 MODEL JAAIVD010000001 pseudo 625925537 LOC116910417 40S ribosomal protein S15-like 9 42897239 42898454 - 116910417 MODEL JAAIVD010000002 pseudo 625925538 B3gnt6 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog) 2 96474978 96477407 - 22301074;30032202 116891711 MODEL JAAIVD010000001;XM_032892982 XP_032748873 acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase protein-coding 625925543 LOC116905644 60S ribosomal protein L7-like 7 418780 419557 + 116905644 MODEL JAAIVD010000026 pseudo 625925544 LOC116907985 uncharacterized LOC116907985 8 113027906 113038895 + 116907985 MODEL JAAIVD010000027;XR_004388865 ncrna 625925549 LOC116904693 small nucleolar RNA SNORA48 6 129049644 129049787 - 116904693 MODEL JAAIVD010000024;XR_004388389 snorna 625925552 LOC116912008 T-complex protein 1 subunit zeta-like 11 56622746 56649583 - 116912008 MODEL JAAIVD010000006 pseudo 625925553 LOC116908703 uncharacterized LOC116908703 9 59066841 59074102 - 116908703 MODEL JAAIVD010000002;XR_004389013 ncrna 625925558 LOC116889567 U4 spliceosomal RNA X 122773372 122773560 - 116889567 MODEL JAAIVD010000014 pseudo 625925559 LOC116911619 elongation factor 1-gamma-like 10 50813136 50815018 - 116911619 MODEL JAAIVD010000005 pseudo 625925560 Ca12 carbonic anhydrase 12 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN chloride ion homeostasis (ortholog); estrous cycle (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 8 61073724 61128356 + 22301074;30032202 116908315 MODEL JAAIVD010000027;XM_032911603;XM_032911604 XP_032767494;XP_032767495 protein-coding 625925576 LOC116893654 olfactory receptor 10V1-like 2 11027265 11028221 + 22301074 116893654 MODEL JAAIVD010000001;XM_032895371 XP_032751262 protein-coding 625925579 Atad2b ATPase family AAA domain containing 2B ENCODES a protein that exhibits histone reader activity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 25557028 25690336 + 22301074;30032202 116906290 MODEL JAAIVD010000026;XM_032909186 XP_032765077 ATPase family AAA domain-containing protein 2B protein-coding 625925611 Fam78b family with sequence similarity 78 member B 10 46336122 46413664 + 116910843 MODEL JAAIVD010000005;XM_032914593 XP_032770484 protein FAM78B protein-coding 625925617 LOC116900616 solute carrier organic anion transporter family member 6A1-like 5 105019829 105069036 - 22301074;30032202 116900616 MODEL JAAIVD010000023;XM_032902335 XP_032758226 protein-coding 625925629 LOC116911925 eukaryotic translation initiation factor 3 subunit J 11 52945600 52946661 + 22301074;30032202 116911925 MODEL JAAIVD010000006;XM_032915811 XP_032771702 protein-coding 625925634 LOC116889447 U6 spliceosomal RNA X 23516893 23516996 + 116889447 MODEL JAAIVD010000014;XR_004386406 snrna 625925637 LOC116913611 pyruvate kinase PKM-like 12 397278 398830 + 116913611 MODEL JAAIVD010000007 pseudo 625925638 LOC116899244 glutathione S-transferase alpha-3 4 98647156 98663852 - 22301074;30032202 116899244 MODEL JAAIVD010000003;XM_032900849 XP_032756740 protein-coding 625925649 LOC116908881 keratin, type I cytoskeletal 17 9 59552905 59558430 - 22301074;30032202 116908881 MODEL JAAIVD010000002;XM_032912324;XM_032912325 XP_032768215;XP_032768216 protein-coding 625925665 Tmem18 transmembrane protein 18 INVOLVED IN cell migration (ortholog); eating behavior (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nuclear membrane (ortholog) 7 44010107 44017365 + 30032202 116904940 MODEL JAAIVD010000026;XM_032907582;XM_032907583;XM_032907584 XP_032763473;XP_032763474;XP_032763475 protein-coding 625925682 LOC116902904 eukaryotic translation initiation factor 1-like 6 107734617 107735089 - 116902904 MODEL JAAIVD010000024 pseudo 625925683 Xrcc6 X-ray repair cross complementing 6 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Animal Disease Models (ortholog); basal cell carcinoma (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); DNA-dependent protein kinase complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) 1 251759143 251779168 + 22301074;30032202 116914171 MODEL JAAIVD010000025;XM_032918413 XP_032774304 X-ray repair cross-complementing protein 6 protein-coding 625925698 LOC116893730 olfactory receptor 9I1-like 2 13857806 13858751 - 116893730 MODEL JAAIVD010000001 pseudo 625925699 Sumf1 sulfatase modifying factor 1 ENCODES a protein that exhibits cupric ion binding (ortholog); formylglycine-generating oxidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN post-translational protein modification (ortholog); protein oxidation (ortholog); ASSOCIATED WITH genetic disease (ortholog); mucosulfatidosis (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 38597572 38677083 + 30032202 116903441 MODEL JAAIVD010000024;XM_032905995 XP_032761886 formylglycine-generating enzyme protein-coding 625925712 LOC116911013 uncharacterized LOC116911013 10 4567037 4567799 - 116911013 MODEL JAAIVD010000005;XR_004389298 ncrna 625925716 Elp1 elongator acetyltransferase complex subunit 1 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN I-kappaB phosphorylation (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); Gaucher's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) 1 94814145 94863622 + 22301074;30032202 116901690 MODEL JAAIVD010000025;XM_032903819 XP_032759710 elongator complex protein 1 protein-coding 625925757 LOC116914505 periphilin-1-like 13 15827130 15828209 - 30032202 116914505 MODEL JAAIVD010000008;XM_032918828 XP_032774719 protein-coding 625925762 LOC116914202 small nucleolar RNA SNORA68 12 90383821 90383949 + 116914202 MODEL JAAIVD010000007;XR_004389735 snorna 625925765 LOC116899900 small nucleolar RNA SNORA17 4 4217652 4217750 - 116899900 MODEL JAAIVD010000003 pseudo 625925766 Aga aspartylglucosaminidase ENCODES a protein that exhibits identical protein binding (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN protein deglycosylation (ortholog); ASSOCIATED WITH aspartylglucosaminuria (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); lysosome (ortholog) 13 34444180 34455832 + 30032202 116914604 MODEL JAAIVD010000008;XM_032918968;XM_032918969 XP_032774859;XP_032774860 N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase protein-coding 625925783 LOC116894928 small nucleolar RNA SNORD22 2 9214988 9215113 - 116894928 MODEL JAAIVD010000001;XR_004387127 snorna 625925786 LOC116911817 U1 spliceosomal RNA 10 20823012 20823182 - 116911817 MODEL JAAIVD010000005;XR_004389355 snrna 625925789 Daam1 dishevelled associated activator of morphogenesis 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH epilepsy (ortholog); intrinsic cardiomyopathy (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 7 85496216 85656893 + 22301074;30032202 116905144 MODEL JAAIVD010000026;XM_032907909;XM_032907910;XM_032907911 XP_032763800;XP_032763801;XP_032763802 disheveled-associated activator of morphogenesis 1 protein-coding 625925822 Tmem70 transmembrane protein 70 ENCODES a protein that exhibits mitochondrial proton-transporting ATP synthase complex binding (ortholog); INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); protein complex oligomerization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); genetic disease (ortholog); hepatocellular adenoma (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 1 136180253 136191632 + 30032202 116903571 MODEL JAAIVD010000025;XM_032906193 XP_032762084 transmembrane protein 70, mitochondrial protein-coding 625925829 Magoh mago homolog, exon junction complex subunit INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of mRNA processing (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); exon-exon junction complex (ortholog); exon-exon junction subcomplex mago-y14 (ortholog) 1 46944920 46952349 - 22301074;30032202 116899223 MODEL JAAIVD010000025;XM_032900826 XP_032756717 protein mago nashi homolog protein-coding 625925838 LOC116890107 developmental pluripotency-associated protein 3-like 1 233381183 233382063 - 116890107 MODEL JAAIVD010000025 pseudo 625925839 Cd300a CD300a molecule ENCODES a protein that exhibits phosphatase binding (ortholog); phosphatidylethanolamine binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN establishment of localization in cell (ortholog); intracellular signal transduction (ortholog); negative regulation of B cell proliferation (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 9 74414028 74427087 - 30032202 116909027 MODEL JAAIVD010000002;XM_032912506 XP_032768397 CMRF35-like molecule 8 protein-coding 625925850 Kcnj11 potassium inwardly rectifying channel subfamily J member 11 ENCODES a protein that exhibits ankyrin binding (ortholog); ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); apoptotic process (ortholog); CAMKK-AMPK signaling cascade (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; altered insulin secretion pathway; ASSOCIATED WITH atopic dermatitis (ortholog); Congenital Hyperinsulinism (ortholog); Developmental Delay, Epilepsy, and Neonatal Diabetes (ortholog); FOUND IN acrosomal vesicle (ortholog); axolemma (ortholog); cell body fiber (ortholog) 2 153408959 153412626 + 22301074;30032202 116892110 MODEL JAAIVD010000001;XM_032893589 XP_032749480 ATP-sensitive inward rectifier potassium channel 11 protein-coding 625925856 Fam107b family with sequence similarity 107 member B INVOLVED IN sensory perception of sound (ortholog) 14 10001899 10201225 + 116883425 MODEL JAAIVD010000009;XM_032884556 XP_032740447 protein FAM107B protein-coding 625925864 LOC116901209 uncharacterized LOC116901209 5 6876359 6877425 - 116901209 MODEL JAAIVD010000023;XR_004387965 ncrna 625925868 LOC116894389 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 156996404 157003517 - 30032202 116894389 MODEL JAAIVD010000001;XM_032896096;XR_004387024 XP_032751987 protein-coding 625925880 Gmip GEM interacting protein ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN small GTPase-mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 13 12070670 12083845 + 22301074;30032202 116914681 MODEL JAAIVD010000008;XM_032919096 XP_032774987 GEM-interacting protein protein-coding 625925905 LOC116911877 U6 spliceosomal RNA 10 26033380 26033486 + 116911877 MODEL JAAIVD010000005;XR_004389391 snrna 625925908 Bbof1 basal body orientation factor 1 INVOLVED IN cilium movement involved in cell motility (ortholog); flagellated sperm motility (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN axoneme (ortholog); sperm flagellum (ortholog) 7 98519886 98545821 + 116905272 MODEL JAAIVD010000026;XM_032908124 XP_032764015 basal body-orientation factor 1 protein-coding 625925924 LOC116907289 olfactory receptor 7G1-like 8 15118010 15118957 - 22301074;30032202 116907289 MODEL JAAIVD010000027;XM_032910238 XP_032766129 protein-coding 625925927 Hykk hydroxylysine kinase ENCODES a protein that exhibits hydroxylysine kinase activity (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Experimental Liver Cirrhosis (ortholog) 8 49004830 49026547 + 30032202 116907240 MODEL JAAIVD010000027;XM_032910201 XP_032766092 protein-coding 625925936 LOC116884666 signal recognition particle 19 kDa protein 15 10022694 10028036 - 22301074;30032202 116884666 MODEL JAAIVD010000010;XM_032885837;XM_032885838 XP_032741728;XP_032741729 protein-coding 625925948 LOC116886758 5S ribosomal RNA 17 43162350 43162468 - 116886758 MODEL JAAIVD010000011;XR_004386159 rrna 625925951 Lsm11 LSM11, U7 small nuclear RNA associated ENCODES a protein that exhibits U7 snRNA binding (ortholog); INVOLVED IN mRNA 3'-end processing by stem-loop binding and cleavage (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH Aicardi-Goutieres Syndrome 8 (ortholog); FOUND IN histone pre-mRNA 3'end processing complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 28654875 28671623 - 30032202 116908892 MODEL JAAIVD010000002;XM_032912340;XM_032912341 XP_032768231;XP_032768232 U7 snRNA-associated Sm-like protein LSm11 protein-coding 625925962 LOC116900763 uncharacterized LOC116900763 5 150582972 150594262 + 116900763 MODEL JAAIVD010000023;XR_004387951 ncrna 625925967 LOC116897958 vacuolar protein sorting-associated protein VTA1 homolog 4 44512402 44513325 - 30032202 116897958 MODEL JAAIVD010000003;XM_032899362 XP_032755253 protein-coding 625925971 Dynap dynactin associated protein INVOLVED IN activation of protein kinase B activity (ortholog); cellular response to ergosterol (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 15 60994236 60997597 + 30032202 116884396 MODEL JAAIVD010000010;XM_032885504 XP_032741395 dynactin-associated protein protein-coding 625925976 Dsel dermatan sulfate epimerase like ENCODES a protein that exhibits chondroitin-glucuronate 5-epimerase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan metabolic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog) 10 84769964 84776138 + 22301074;30032202 116911236 MODEL JAAIVD010000005;XM_032915136 XP_032771027 dermatan-sulfate epimerase-like protein protein-coding 625925982 Gfral GDNF family receptor alpha like ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN GDF15-GFRAL signaling pathway (ortholog); negative regulation of appetite (ortholog); negative regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); FOUND IN actin cytoskeleton (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog) 8 70424165 70469725 - 30032202 116907765 MODEL JAAIVD010000027;XM_032910904 XP_032766795 GDNF family receptor alpha-like protein-coding 625925996 Olfml2b olfactomedin like 2B ENCODES a protein that exhibits extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) 10 49842818 49879992 + 30032202 116911496 MODEL JAAIVD010000005;XM_032915480 XP_032771371 olfactomedin-like protein 2B protein-coding 625926008 LOC116897477 small nucleolar RNA SNORD73 3 67420703 67420774 + 116897477 MODEL JAAIVD010000012;XR_004387502 snorna 625926011 Oxr1 oxidation resistance 1 ENCODES a protein that exhibits oxidoreductase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to hydroperoxide (ortholog); negative regulation of cellular response to oxidative stress (ortholog); ASSOCIATED WITH cerebellar hyplasia/atrophy, epilepsy, and global developmental delay (ortholog); cerebellar hypoplasia (ortholog); epilepsy (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 1 216220476 216576858 + 30032202 116911063 MODEL JAAIVD010000025;XM_032914831;XM_032914839;XM_032914849;XM_032914857;XM_032914863;XM_032914873;XM_032914883 XP_032770722;XP_032770730;XP_032770740;XP_032770748;XP_032770754;XP_032770764;XP_032770774 oxidation resistance protein 1 protein-coding 625926044 Dennd4b DENN domain containing 4B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Rab protein signal transduction (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Dwarfism (ortholog); Familial Prostate Cancer (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 3 63360445 63375956 - 22301074;30032202 116896609 MODEL JAAIVD010000012;XM_032897861;XM_032897862;XM_032897863;XM_032897864 XP_032753752;XP_032753753;XP_032753754;XP_032753755 DENN domain-containing protein 4B protein-coding 625926085 Klf12 KLF transcription factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH schizophrenia (ortholog); substance-related disorder (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 12 24277617 24641015 + 30032202 116913902 MODEL JAAIVD010000007;XM_032918181 XP_032774072 Krueppel-like factor 12;Kruppel like factor 12 protein-coding 625926096 Aadac arylacetamide deacetylase ENCODES a protein that exhibits deacetylase activity (ortholog); serine hydrolase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN positive regulation of triglyceride catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 95057219 95068268 - 30032202 116895479 MODEL JAAIVD010000012;XM_032896737 XP_032752628 protein-coding 625926105 LOC116895673 histone H2B subacrosomal variant-like 3 197577134 197577560 + 22301074;30032202 116895673 MODEL JAAIVD010000012;XM_032896877 XP_032752768 protein-coding 625926109 Ccnc cyclin C ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN G0 to G1 transition (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of triglyceride metabolic process (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Burns (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) 1 121594991 121611212 - 30032202;8336937 116902945 MODEL D14013;JAAIVD010000025;XM_032905274;XM_032905281 BAA03114;XP_032761165;XP_032761172 cyclin-C protein-coding 625926128 Mc1r melanocortin 1 receptor ENCODES a protein that exhibits hormone binding (ortholog); melanocortin receptor activity (ortholog); melanocyte-stimulating hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); age related macular degeneration 7 (ortholog); allergic contact dermatitis (ortholog); FOUND IN plasma membrane (ortholog) 17 43016520 43017473 + 22301074;30032202 116886253 A0A089ZWZ0;A0A090A136;A0A090BDA6;A0A090BDB2;E9RGE2;E9RGE3;E9RGE4;E9RGE5;E9RGE7;E9RGE9;E9RGF2;E9RGF4 MODEL AB576605;AB576606;AB576607;AB576608;AB576609;AB576610;AB576611;AB576612;AB576613;AB576614;AB576615;AB576616;AB576617;AB576618;AB576619;AB576620;AB576621;AB576622;AB576623;AB576624;AB762745;AB762746;AB762747;AB762748;AB762749;AB762750;AB762751;AB762752;AB762753;AB762754;AB762755;AB762756;AB762757;AB762758;AB762759;AB762760;AB762761;AB762762;AB762763;AB762764;AB762765;AB973117;AB973118;AB973119;AB973120;JAAIVD010000011;XM_032887674 BAJ76692;BAJ76693;BAJ76694;BAJ76695;BAJ76696;BAJ76697;BAJ76698;BAJ76699;BAJ76700;BAJ76701;BAJ76702;BAJ76703;BAJ76704;BAJ76705;BAJ76706;BAJ76707;BAJ76708;BAJ76709;BAJ76710;BAJ76711;BAP47672;BAP47673;BAP47674;BAP47675;BAP47676;BAP47677;BAP47678;BAP47679;BAP47680;BAP47681;BAP47682;BAP47683;BAP47684;BAP47685;BAP47686;BAP47687;BAP47688;BAP47689;BAP47690;BAP47691;BAP47692;BAU20218;BAU20219;BAU20220;BAU20221;XP_032743565 melanocyte-stimulating hormone receptor protein-coding 625926131 Fcer1a Fc fragment of IgE receptor Ia ENCODES a protein that exhibits high-affinity IgE receptor activity (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); eosinophil degranulation (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH asthma (ortholog); drug allergy (ortholog); Drug Eruptions (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 10 52268876 52274929 - 30032202 116911469 MODEL JAAIVD010000005;XM_032915449;XM_032915450 XP_032771340;XP_032771341 high affinity immunoglobulin epsilon receptor subunit alpha protein-coding 625926146 Fgf7 fibroblast growth factor 7 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); branching involved in salivary gland morphogenesis (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) 5 104346800 104397769 + 22301074;30032202 116901913 MODEL JAAIVD010000023;XM_032904131 XP_032760022 protein-coding 625926153 LOC116903133 AP-1 complex subunit sigma-3 6 7860924 7861804 - 22301074;30032202 116903133 MODEL JAAIVD010000024;XM_032905489 XP_032761380 protein-coding 625926158 Taf9b TATA-box binding protein associated factor 9b INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) X 65769494 65778435 - 22301074;30032202 116888793 MODEL JAAIVD010000014;XM_032890073 XP_032745964 transcription initiation factor TFIID subunit 9B protein-coding 625926169 LOC116899708 dephospho-CoA kinase domain-containing protein-like 4 179845461 179846953 + 116899708 MODEL JAAIVD010000003 pseudo 625926170 LOC116904812 U6 spliceosomal RNA 6 114194362 114194468 - 116904812 MODEL JAAIVD010000024;XR_004388463 snrna 625926173 LOC116898497 glyceraldehyde-3-phosphate dehydrogenase-like 4 123116628 123117614 + 116898497 MODEL JAAIVD010000003 pseudo 625926174 LOC116902144 polycomb group protein ASXL1-like 5 132662018 132673729 + 30032202 116902144 MODEL JAAIVD010000023;XM_032904473 XP_032760364 protein-coding 625926182 Apom apolipoprotein M ENCODES a protein that exhibits antioxidant activity (ortholog); lipid transporter activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); high-density lipoprotein particle assembly (ortholog); high-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Experimental Diabetes Mellitus (ortholog); Metabolic Syndrome (ortholog); FOUND IN discoidal high-density lipoprotein particle (ortholog); extracellular region (ortholog); extracellular space (ortholog) 18 7728037 7731549 - 30032202 116887386 MODEL JAAIVD010000013;XM_032888980 XP_032744871 protein-coding 625926192 LOC116910603 olfactory receptor 6C1-like 1 161663961 161680291 + 116910603 MODEL JAAIVD010000025 pseudo 625926193 LOC116883209 PC-esterase domain-containing protein 1A-like 14 42723964 42724806 + 116883209 MODEL JAAIVD010000009 pseudo 625926194 Cops6 COP9 signalosome subunit 6 INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); prostate cancer (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 16 15533537 15536366 + 22301074;30032202 116885724 MODEL JAAIVD010000004;XM_032887032 XP_032742923 COP9 signalosome complex subunit 6 protein-coding 625926208 LOC116904762 small nucleolar RNA SNORA17 6 42551548 42551649 + 116904762 MODEL JAAIVD010000024 pseudo 625926209 Ppil2 peptidylprolyl isomerase like 2 ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 2361999 2386139 - 22301074;30032202 116898627 MODEL JAAIVD010000003;XM_032899841 XP_032755732 RING-type E3 ubiquitin-protein ligase PPIL2 protein-coding 625926233 LOC116900848 glyceraldehyde-3-phosphate dehydrogenase-like 5 61526363 61537564 + 116900848 MODEL JAAIVD010000023 pseudo 625926234 LOC116893439 NACHT, LRR and PYD domains-containing protein 4B-like 2 176271204 176310003 + 22301074;30032202 116893439 MODEL JAAIVD010000001;XM_032895206 XP_032751097 protein-coding 625926244 Anp32a acidic nuclear phosphoprotein 32 family member A ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); integrin binding (ortholog); INVOLVED IN negative regulation of plasma membrane bounded cell projection assembly (ortholog); negative regulation of protein modification process (ortholog); nucleocytoplasmic transport (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Disease Models (ortholog); Brain Injuries (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 8 56645637 56682824 + 30032202 116906678 MODEL JAAIVD010000027;XM_032909464;XM_032909465 XP_032765355;XP_032765356 acidic leucine-rich nuclear phosphoprotein 32 family member A protein-coding 625926258 Loxl4 lysyl oxidase like 4 ENCODES a protein that exhibits protein-lysine 6-oxidase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); urinary bladder cancer (ortholog); FOUND IN extracellular region (ortholog); receptor complex (ortholog) 2 41699123 41716119 - 22301074;30032202 116893798 MODEL JAAIVD010000001;XM_032895503 XP_032751394 lysyl oxidase homolog 4 protein-coding 625926277 Creg2 cellular repressor of E1A stimulated genes 2 FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 4 115863620 115904522 - 116899322 MODEL JAAIVD010000003;XM_032900988 XP_032756879 protein CREG2 protein-coding 625926285 LOC116895063 small nucleolar RNA SNORA17 2 206496227 206496329 + 116895063 MODEL JAAIVD010000001 pseudo 625926286 Scarf2 scavenger receptor class F member 2 ENCODES a protein that exhibits scavenger receptor activity (ortholog); INVOLVED IN heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); spermatogenic failure 52 (ortholog) 4 3061534 3073104 + 30032202 116898652 MODEL JAAIVD010000003;XM_032899883 XP_032755774 protein-coding 625926301 Caskin1 CASK interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN regulation of postsynaptic density assembly (ortholog); signal transduction (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 9 1771856 1792497 + 22301074 116910450 MODEL JAAIVD010000002;XM_032914303;XM_032914304;XM_032914305 XP_032770194;XP_032770195;XP_032770196 caskin-1 protein-coding 625926332 LOC116894473 60S ribosomal protein L23a-like 2 168088387 168089604 - 116894473 MODEL JAAIVD010000001 pseudo 625926333 LOC116914353 putative protein FAM90A7P 13 64519272 64527987 - 116914353 MODEL JAAIVD010000008;XM_032918566 XP_032774457 protein-coding 625926340 Hand2 heart and neural crest derivatives expressed 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN adult heart development (ortholog); apoptotic process involved in heart morphogenesis (ortholog); cardiac neural crest cell development involved in outflow tract morphogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); atrial fibrillation (ortholog); Cardiomegaly (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 13 31555858 31557818 - 22301074;30032202 116914692 MODEL JAAIVD010000008;XM_032919113 XP_032775004 heart- and neural crest derivatives-expressed protein 2 protein-coding 625926344 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 39930774 39930879 + 116910794 MODEL JAAIVD010000002 trna 625926345 Lzts1 leucine zipper tumor suppressor 1 INVOLVED IN negative regulation of macroautophagy (ortholog); regulation of dendrite morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); esophageal cancer (ortholog); Esophageal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); dendritic shaft (ortholog) 13 20258014 20312970 + 30032202 116914303 MODEL JAAIVD010000008;XM_032918545 XP_032774436 leucine zipper putative tumor suppressor 1 protein-coding 625926353 LOC116908246 ubiquitin-conjugating enzyme E2 variant 1-like 8 87843360 87855804 - 30032202 116908246 MODEL JAAIVD010000027;XM_032911502 XP_032767393 protein-coding 625926359 Ccn2 cellular communication network factor 2 ENCODES a protein that exhibits fibronectin binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); calcium ion transmembrane import into cytosol (ortholog); cartilage condensation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Aggressive Fibromatosis (ortholog); aortic valve insufficiency (ortholog); FOUND IN cell cortex (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 2 210662886 210666014 + 22301074;30032202 116892948 MODEL JAAIVD010000001;XM_032894896 XP_032750787 CCN family member 2 protein-coding 625926368 Cbln3 cerebellin 3 precursor FOUND IN extracellular space (ortholog); parallel fiber to Purkinje cell synapse (ortholog); synapse (ortholog) 12 69137437 69139890 + 22301074 116913738 MODEL JAAIVD010000007;XM_032918043 XP_032773934 cerebellin-3 protein-coding 625926375 LOC116913342 uncharacterized LOC116913342 12 54775365 54777942 + 116913342 MODEL JAAIVD010000007;XR_004389608 ncrna 625926380 Slc7a9 solute carrier family 7 member 9 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); broad specificity neutral L-amino acid:basic L-amino acid antiporter activity (ortholog); INVOLVED IN amino acid transport (ortholog); L-cystine transport (ortholog); neutral amino acid transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cystinuria (ortholog); genetic disease (ortholog); kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 2 163194518 163215111 - 22301074;30032202 116894437 MODEL JAAIVD010000001;XM_032896140 XP_032752031 B(0,+)-type amino acid transporter 1 protein-coding 625926396 Chst7 carbohydrate sulfotransferase 7 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); N-acetylglucosamine 6-O-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); N-acetylglucosamine metabolic process (ortholog); sulfur compound metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) X 3783841 3785425 + 22301074;30032202 116888699 MODEL JAAIVD010000014;XM_032889989 XP_032745880 protein-coding 625926401 Rimoc1 RAB7A interacting MON1-CCZ1 complex subunit 1 INVOLVED IN mitophagy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 176152747 176163106 + 22301074;30032202 116897158 MODEL JAAIVD010000012;XM_032898828;XM_032898829 XP_032754719;XP_032754720 C3H5orf51 UPF0600 protein C5orf51 homolog;chromosome 3 C5orf51 homolog protein-coding 625926414 Tomm22 translocase of outer mitochondrial membrane 22 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); protein transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); protein insertion into mitochondrial membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN membrane (ortholog); mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) 7 19791632 19792449 - 30032202 116905628 MODEL JAAIVD010000026;XM_032908609 XP_032764500 mitochondrial import receptor subunit TOM22 homolog protein-coding 625926418 LOC116890042 40S ribosomal protein S26-like 1 205594316 205594636 + 22301074;30032202 116890042 MODEL JAAIVD010000025;XM_032890813 XP_032746704 protein-coding 625926421 Pogz pogo transposable element derived with ZNF domain INVOLVED IN double-strand break repair via homologous recombination (ortholog); kinetochore assembly (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN chromatin (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 3 62372823 62417009 - 30032202 116896580 MODEL JAAIVD010000012;XM_032897800;XM_032897802;XM_032897803;XM_032897804;XM_032897805;XM_032897806 XP_032753691;XP_032753693;XP_032753694;XP_032753695;XP_032753696;XP_032753697 pogo transposable element with ZNF domain protein-coding 625926460 LOC116889918 olfactory receptor 6C2-like 1 160645849 160646788 + 116889918 MODEL JAAIVD010000025 pseudo 625926461 Cep295nl CEP295 N-terminal like FOUND IN motile cilium (ortholog) 9 65722608 65725720 + 30032202 116908736 MODEL JAAIVD010000002;XM_032912083 XP_032767974 protein DDC8 homolog protein-coding 625926466 LOC116895576 tropomyosin alpha-3 chain-like 3 137295935 137297297 - 116895576 MODEL JAAIVD010000012 pseudo 625926467 Cdc123 cell division cycle 123 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN eukaryotic translation initiation factor 2 complex assembly (ortholog); FOUND IN cytoplasm (ortholog) 14 12118372 12160887 - 30032202 116883786 MODEL JAAIVD010000009;XM_032885029 XP_032740920 cell division cycle protein 123 homolog protein-coding 625926484 LOC116895342 60S ribosomal protein L9-like 3 44079645 44080220 + 116895342 MODEL JAAIVD010000012 pseudo 625926485 LOC116889913 olfactory receptor 6C1-like 1 160496498 160497448 + 22301074;30032202 116889913 MODEL JAAIVD010000025;XM_032890732 XP_032746623 protein-coding 625926488 Myl6b myosin light chain 6B ASSOCIATED WITH Keloid (ortholog) 1 155957635 155960811 - 22301074;30032202 116906137 MODEL JAAIVD010000025;XM_032909129 XP_032765020 protein-coding 625926498 LOC116905721 cytosolic purine 5'-nucleotidase-like 7 73628088 73629776 + 116905721 MODEL JAAIVD010000026 pseudo 625926499 Gatb glutamyl-tRNA amidotransferase subunit B ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 41 (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) 3 67933582 68005972 - 30032202 116896729 MODEL JAAIVD010000012;XM_032898152 XP_032754043 glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial protein-coding 625926516 LOC116892745 ribonuclease H2 subunit B-like 2 180730481 180731383 + 22301074;30032202 116892745 MODEL JAAIVD010000001;XM_032894617 XP_032750508 protein-coding 625926520 LOC116893014 cytochrome b5 reductase 4-like 2 224742259 224744464 - 22301074;30032202 116893014 MODEL JAAIVD010000001;XM_032894977 XP_032750868 protein-coding 625926525 Bmp2 bone morphogenetic protein 2 ENCODES a protein that exhibits BMP receptor binding (ortholog); co-receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN ameloblast differentiation (ortholog); animal organ morphogenesis (ortholog); aortic valve development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); bone disease (ortholog); Bone Fractures (ortholog); FOUND IN BMP receptor complex (ortholog); cell surface (ortholog); cilium (ortholog) 5 113267883 113277716 + 22301074;30032202 116902011 MODEL JAAIVD010000023;XM_032904278 XP_032760169 protein-coding 625926532 Invs inversin INVOLVED IN animal organ development (ortholog); embryonic heart tube left/right pattern formation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); ASSOCIATED WITH cholestasis (ortholog); cystic kidney disease (ortholog); fundus dystrophy (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog) 1 101375435 101514962 + 22301074;30032202 116902070 MODEL JAAIVD010000025;XM_032904362 XP_032760253 protein-coding 625926553 Gcsh glycine cleavage system protein H ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); enzyme binding (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN folate cycle metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN mitochondrion (ortholog) 17 36619382 36640745 - 22301074;30032202 116886408 MODEL JAAIVD010000011;XM_032887882 XP_032743773 glycine cleavage system H protein, mitochondrial protein-coding 625926562 LOC116895703 uncharacterized LOC116895703 3 212185845 212222393 + 116895703 MODEL JAAIVD010000012;XR_004387304 ncrna 625926567 LOC116897561 small nucleolar RNA SNORA17 3 44289864 44289995 - 116897561 MODEL JAAIVD010000012;XR_004387574 snorna 625926570 LOC116900572 olfactory receptor 4K14-like 5 90273262 90274203 - 22301074 116900572 MODEL JAAIVD010000023;XM_032902294 XP_032758185 protein-coding 625926574 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41415064 41415135 + 116884191 MODEL JAAIVD010000009 trna 625926575 Tnni3k TNNI3 interacting kinase ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN bundle of His cell to Purkinje myocyte communication (ortholog); peptidyl-serine autophosphorylation (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH Cardiac Conduction Disease with or without Dilated Cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 6399589 6672192 + 22301074;30032202 116896136 MODEL JAAIVD010000012;XM_032897119;XM_032897120 XP_032753010;XP_032753011 serine/threonine-protein kinase TNNI3K protein-coding 625926609 Eomes eomesodermin ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); astrocyte differentiation (ortholog); blastocyst development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); autoimmune disease of the nervous system (ortholog); Colonic Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 8 109713536 109721059 + 22301074;30032202 116906772 MODEL JAAIVD010000027;XM_032909615;XM_032909616;XM_032909617;XM_032909618 XP_032765506;XP_032765507;XP_032765508;XP_032765509 eomesodermin homolog protein-coding 625926625 LOC116904394 40S ribosomal protein S23-like 6 98370814 98371258 + 116904394 MODEL JAAIVD010000024 pseudo 625926626 LOC116895068 small nucleolar RNA SNORA17 2 59637246 59637327 + 116895068 MODEL JAAIVD010000001 pseudo 625926627 LOC116907780 olfactory receptor 147-like 8 31957697 31958629 + 22301074;30032202 116907780 MODEL JAAIVD010000027;XM_032910922 XP_032766813 protein-coding 625926630 LOC116890493 small nucleolar RNA SNORA48 1 253713587 253713725 - 116890493 MODEL JAAIVD010000025;XR_004386680 snorna 625926633 LOC116899433 aldehyde oxidase 2 4 134024160 134110763 - 22301074;30032202 116899433 MODEL JAAIVD010000003;XM_032901187 XP_032757078 protein-coding 625926672 LOC116900960 40S ribosomal protein S20-like 5 97823217 97824279 + 116900960 MODEL JAAIVD010000023 pseudo 625926673 Adgrl2 adhesion G protein-coupled receptor L2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN excitatory synapse assembly (ortholog); positive regulation of synapse assembly (ortholog); response to bacterium (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 3 11663555 12157177 + 22301074;30032202 116896161 MODEL JAAIVD010000012;XM_032897155;XM_032897156;XM_032897157;XM_032897158;XM_032897159;XM_032897160;XM_032897161;XM_032897162;XM_032897163;XM_032897164;XM_032897165;XM_032897166;XM_032897167;XM_032897168;XM_032897169;XM_032897171;XM_032897172;XM_032897173;XM_032897174;XM_032897175;XM_032897176;XM_032897177;XM_032897178;XM_032897179;XM_032897180;XM_032897181;XM_032897182;XM_032897183;XM_032897184;XM_032897185;XM_032897186;XM_032897187;XM_032897188;XM_032897189;XM_032897190;XM_032897192;XM_032897193 XP_032753046;XP_032753047;XP_032753048;XP_032753049;XP_032753050;XP_032753051;XP_032753052;XP_032753053;XP_032753054;XP_032753055;XP_032753056;XP_032753057;XP_032753058;XP_032753059;XP_032753060;XP_032753062;XP_032753063;XP_032753064;XP_032753065;XP_032753066;XP_032753067;XP_032753068;XP_032753069;XP_032753070;XP_032753071;XP_032753072;XP_032753073;XP_032753074;XP_032753075;XP_032753076;XP_032753077;XP_032753078;XP_032753079;XP_032753080;XP_032753081;XP_032753083;XP_032753084 protein-coding 625926766 LOC116914291 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like 13 10382590 10383104 + 116914291 MODEL JAAIVD010000008 pseudo 625926767 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72249412 72249484 + 116914217 MODEL JAAIVD010000007 trna 625926768 Kcna7 potassium voltage-gated channel subfamily A member 7 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog) 2 154098072 154103588 - 22301074;30032202 116894341 MODEL JAAIVD010000001;XM_032896037 XP_032751928 protein-coding 625926774 LOC116902721 60S acidic ribosomal protein P0-like 6 53312814 53313850 + 116902721 MODEL JAAIVD010000024 pseudo 625926775 Dpp4 dipeptidyl peptidase 4 ENCODES a protein that exhibits chemorepellent activity (ortholog); collagen binding (ortholog); dipeptidyl-peptidase activity (ortholog); INVOLVED IN B-1a B cell differentiation (ortholog); behavioral fear response (ortholog); endothelial cell migration (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Coronavirus infectious disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) 5 39909382 39991415 - 22301074;30032202 116901450 MODEL JAAIVD010000023;XM_032903386 XP_032759277 protein-coding 625926805 LOC116895354 pancreatic alpha-amylase-like 3 46620238 46628734 + 116895354 MODEL JAAIVD010000012 pseudo 625926806 Kctd15 potassium channel tetramerization domain containing 15 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleus (ortholog) 2 164036829 164051758 + 22301074 116892278 MODEL JAAIVD010000001;XM_032893868 XP_032749759 BTB/POZ domain-containing protein KCTD15 protein-coding 625926817 LOC116887148 uncharacterized LOC116887148 18 41849257 41856696 + 116887148 MODEL JAAIVD010000013;XR_004386200 ncrna 625926823 LOC116889815 alpha-enolase-like 22301074;30032202 116889815 MODEL JAAIVD010001046;XM_032890659 XP_032746550 protein-coding 625926824 LOC116895598 60S ribosomal protein L19-like 3 152650222 152650812 - 116895598 MODEL JAAIVD010000012 pseudo 625926825 Nit2 nitrilase family member 2 ENCODES a protein that exhibits omega-amidase activity (ortholog); INVOLVED IN asparagine metabolic process (ortholog); glutamine metabolic process (ortholog); oxaloacetate metabolic process (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 41267936 41278651 - 30032202 116898908 MODEL JAAIVD010000003;XM_032900315 XP_032756206 omega-amidase NIT2 protein-coding 625926839 Pfkfb4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4 ENCODES a protein that exhibits 6-phosphofructo-2-kinase activity (ortholog); fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); PARTICIPATES IN glycolysis pathway; FOUND IN 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex (ortholog) 8 100268043 100305787 + 22301074;30032202 116907632 MODEL JAAIVD010000027;XM_032910693 XP_032766584 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 4 protein-coding 625926857 Cmtm6 CKLF like MARVEL transmembrane domain containing 6 INVOLVED IN endocytic recycling (ortholog); protein transport (ortholog); regulation of protein stability (ortholog); FOUND IN early endosome membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) 8 105336957 105355035 + 22301074 116907825 MODEL JAAIVD010000027;XM_032911006 XP_032766897 CKLF-like MARVEL transmembrane domain-containing protein 6 protein-coding 625926865 LOC116907673 olfactory receptor 147-like 8 31599973 31600908 + 22301074;30032202 116907673 MODEL JAAIVD010000027;XM_032910767 XP_032766658 protein-coding 625926869 Rnf113a ring finger protein 113A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of chemokine-mediated signaling pathway (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES (ortholog); nonphotosensitive trichothiodystrophy 5 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) X 103359144 103360373 + 22301074;30032202 116889129 MODEL JAAIVD010000014;XM_032890300 XP_032746191 E3 ubiquitin-protein ligase RNF113A protein-coding 625926874 LOC116902851 olfactory receptor 2A1/2A42-like 6 97425960 97426925 - 22301074 116902851 MODEL JAAIVD010000024;XM_032905179 XP_032761070 protein-coding 625926877 LOC116885974 U4 spliceosomal RNA 16 38336850 38336990 - 116885974 MODEL JAAIVD010000004;XR_004386055 snrna 625926880 Pdx1 pancreatic and duodenal homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell differentiation (ortholog); cellular response to acadesine (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); cerebral infarction (ortholog); diabetes mellitus (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 6576602 6581661 - 22301074;30032202 116885746 MODEL JAAIVD010000004;XM_032887054 XP_032742945 pancreas/duodenum homeobox protein 1 protein-coding 625926886 LOC116912300 vomeronasal type-2 receptor 116-like 11 19215073 19227375 - 22301074;30032202 116912300 MODEL JAAIVD010000006;XM_032916308;XM_032916309;XM_032916311 XP_032772199;XP_032772200;XP_032772202 protein-coding 625926898 LOC116895792 mitochondrial import inner membrane translocase subunit TIM14-like 3 60978136 60978501 + 116895792 MODEL JAAIVD010000012 pseudo 625926899 LOC116894587 vomeronasal type-1 receptor 4-like 2 180424651 180425568 - 22301074;30032202 116894587 MODEL JAAIVD010000001;XM_032896306 XP_032752197 protein-coding 625926902 Lig1 DNA ligase 1 ENCODES a protein that exhibits DNA ligase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH epilepsy with generalized tonic-clonic seizures (ortholog); immunodeficiency 96 (ortholog); inherited metabolic disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 173717959 173756315 - 22301074;30032202 116892615 MODEL JAAIVD010000001;XM_032894420 XP_032750311 protein-coding 625926934 P4ha2 prolyl 4-hydroxylase subunit alpha 2 ENCODES a protein that exhibits procollagen-proline 4-dioxygenase activity (ortholog); ASSOCIATED WITH Myopia 25, Autosomal Dominant (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 9 36568982 36590304 + 22301074;30032202 116909434 MODEL JAAIVD010000002;XM_032913009;XM_032913010 XP_032768900;XP_032768901 prolyl 4-hydroxylase subunit alpha-2 protein-coding 625926956 LOC116900857 olfactory receptor 1094-like 5 63887096 63888097 + 22301074;30032202 116900857 MODEL JAAIVD010000023;XM_032902545 XP_032758436 protein-coding 625926959 LOC116884583 protocadherin-3 15 1054852 1058758 + 22301074 116884583 MODEL JAAIVD010000010;XM_032885724 XP_032741615 protein-coding 625926964 Plxna3 plexin A3 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); branchiomotor neuron axon guidance (ortholog); facial nerve structural organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Childhood Schizophrenia (ortholog); disorder of sexual development (ortholog) X 128335484 128350770 + 22301074;30032202 116888214 MODEL JAAIVD010000014;XM_032889508 XP_032745399 plexin-A3 protein-coding 625927001 Rarres2 retinoic acid receptor responder 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to insulin stimulus (ortholog); embryonic digestive tract development (ortholog); ASSOCIATED WITH essential hypertension (ortholog); glucose intolerance (ortholog); granulosa cell tumor (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); extracellular space (ortholog) 6 92396026 92399187 + 30032202 116903857 MODEL JAAIVD010000024;XM_032906596;XM_032906597;XM_032906598 XP_032762487;XP_032762488;XP_032762489 retinoic acid receptor responder protein 2 protein-coding 625927017 LOC116903926 thymosin beta-10-like 6 100209263 100209576 + 116903926 MODEL JAAIVD010000024 pseudo 625927018 Asnsd1 asparagine synthetase domain containing 1 INVOLVED IN adipose tissue development (ortholog); muscle organ development (ortholog); skeletal muscle organ development (ortholog); ASSOCIATED WITH myopathy (ortholog) 4 121868713 121871858 + 22301074 116899358 MODEL JAAIVD010000003;XM_032901067 XP_032756958 asparagine synthetase domain-containing protein 1 protein-coding 625927025 Klhl9 kelch like family member 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); midbody (ortholog) 1 65553036 65557288 - 30032202 116900391 MODEL JAAIVD010000025;XM_032902140 XP_032758031 kelch-like protein 9 protein-coding 625927030 LOC116898527 histidine--tRNA ligase, cytoplasmic-like 4 139910565 139911831 - 116898527 MODEL JAAIVD010000003 pseudo 625927031 Gfra1 GDNF family receptor alpha 1 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); integrin binding (ortholog); neurotrophin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); kidney development (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Churg-Strauss syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 2 57669137 57895565 + 22301074;30032202 116891320 MODEL JAAIVD010000001;XM_032892237;XM_032892238;XM_032892239;XM_032892240;XM_032892241;XM_032892242;XM_032892243 XP_032748128;XP_032748129;XP_032748130;XP_032748131;XP_032748132;XP_032748133;XP_032748134 GDNF family receptor alpha-1 protein-coding 625927059 Ubn2 ubinuclein 2 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog) 6 101304440 101370870 - 30032202 116903947 MODEL JAAIVD010000024;XM_032906733 XP_032762624 ubinuclein-2 protein-coding 625927081 ND1 NADH dehydrogenase subunit 1 MT 2738 3692 + 7751799 B7SE61 REVIEWED EU273707 ABX45233;YP_002791016 protein-coding 625927082 LOC116888897 dystrophin-like X 43834099 43931799 - 22301074;30032202 116888897 MODEL JAAIVD010000014;XM_032890158 XP_032746049 protein-coding 625927094 LOC116913025 U2 spliceosomal RNA 11 22375975 22376140 - 116913025 MODEL JAAIVD010000006 pseudo 625927095 LOC116883942 integrin alpha-8-like 14 13754257 13757038 + 30032202 116883942 MODEL JAAIVD010000009;XM_032885191 XP_032741082 protein-coding 625927100 Hps5 HPS5 biogenesis of lysosomal organelles complex 2 subunit 2 INVOLVED IN blood coagulation (ortholog); pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog) 2 152576033 152615025 + 22301074;30032202 116892097 MODEL JAAIVD010000001;XM_032893574 XP_032749465 Hermansky-Pudlak syndrome 5 protein protein-coding 625927127 Fgfr1 fibroblast growth factor receptor 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); auditory receptor cell development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN cerium oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acrocephalosyndactylia (ortholog); acute myeloid leukemia (ortholog); FOUND IN glutamatergic synapse (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 13 60918566 60973142 - 22301074;30032202 116914481 MODEL JAAIVD010000008;XM_032918785;XM_032918786;XM_032918787;XM_032918788;XM_032918789;XM_032918790;XM_032918791;XM_032918792 XP_032774676;XP_032774677;XP_032774678;XP_032774679;XP_032774680;XP_032774681;XP_032774682;XP_032774683 protein-coding 625927164 LOC116897248 microtubule-associated protein 1B-like 3 197064840 197073593 + 30032202 116897248 MODEL JAAIVD010000012;XM_032898978 XP_032754869 protein-coding 625927170 Piezo1 piezo type mechanosensitive ion channel component 1 (Er blood group) ENCODES a protein that exhibits identical protein binding (ortholog); mechanosensitive monoatomic cation channel activity (ortholog); mechanosensitive monoatomic ion channel activity (ortholog); INVOLVED IN detection of mechanical stimulus (ortholog); monoatomic cation transport (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH dehydrated hereditary stomatocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN cuticular plate (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 17 42120710 42182138 - 30032202 116886293 MODEL JAAIVD010000011;XM_032887728 XP_032743619 piezo-type mechanosensitive ion channel component 1 protein-coding 625927225 LOC116896352 toll-like receptor 12 1 29521556 29524534 + 22301074;30032202 116896352 MODEL JAAIVD010000025;XM_032897458 XP_032753349 protein-coding 625927229 LOC116908076 cytochrome P450 1A2 ENCODES a protein that exhibits caffeine oxidase activity (ortholog); demethylase activity (ortholog); enzyme binding (ortholog); INVOLVED IN alkaloid metabolic process (ortholog); cellular respiration (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; caffeine pharmacokinetics pathway; clomipramine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); Atrophy (ortholog) 8 51562873 51569897 - 22301074;30032202 116908076 MODEL JAAIVD010000027;XM_032911352 XP_032767243 protein-coding 625927240 LOC116889937 cytochrome P450 11B1, mitochondrial-like 1 247566740 247569748 - 116889937 MODEL JAAIVD010000025 pseudo 625927241 LOC116913693 olfactory receptor 11H7-like 12 72662921 72663862 - 22301074 116913693 MODEL JAAIVD010000007;XM_032917985 XP_032773876 protein-coding 625927244 Rtca RNA 3'-terminal phosphate cyclase ENCODES a protein that exhibits RNA-3'-phosphate cyclase activity (ortholog); INVOLVED IN negative regulation of optical nerve axon regeneration (ortholog); FOUND IN nucleoplasm (ortholog) 3 43195914 43218227 + 22301074;30032202 116896332 MODEL JAAIVD010000012;XM_032897430 XP_032753321 protein-coding 625927259 LOC116883335 RISC-loading complex subunit TARBP2 1 260559838 260560995 - 116883335 MODEL JAAIVD010000025;XM_032884409 XP_032740300 protein-coding 625927266 LOC116889532 small nucleolar RNA SNORA40 X 14884419 14884499 - 116889532 MODEL JAAIVD010000014 pseudo 625927267 LOC116905780 14-3-3 protein sigma-like 7 8600519 8601513 - 30032202 116905780 MODEL JAAIVD010000026;XM_032908755 XP_032764646 protein-coding 625927272 LOC116907318 glyceraldehyde-3-phosphate dehydrogenase-like 8 28869522 28870240 - 116907318 MODEL JAAIVD010000027 pseudo 625927273 Cacfd1 calcium channel flower domain containing 1 5 9633336 9646721 - 22301074;30032202 116901247 MODEL JAAIVD010000023;XM_032903000;XM_032903001 XP_032758891;XP_032758892 calcium channel flower homolog protein-coding 625927288 Fam135b family with sequence similarity 135 member B 1 244278607 244555932 - 116912340 MODEL JAAIVD010000025;XM_032916392 XP_032772283 protein FAM135B protein-coding 625927313 LOC116900016 PIH1 domain-containing protein 1-like 5 11093492 11094612 - 116900016 MODEL JAAIVD010000023 pseudo 625927314 Nanos2 nanos C2HC-type zinc finger 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); mRNA binding (ortholog); INVOLVED IN germ-line stem cell population maintenance (ortholog); mRNA catabolic process (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) 2 171633228 171634661 - 30032202 116894497 MODEL JAAIVD010000001;XM_032896206 XP_032752097 nanos homolog 2 protein-coding 625927319 LOC116898381 eukaryotic translation initiation factor 4E-like 4 71748502 71749194 - 116898381 MODEL JAAIVD010000003 pseudo 625927320 Zbtb45 zinc finger and BTB domain containing 45 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 174174645 174179149 + 22301074;30032202 116892623 MODEL JAAIVD010000001;XM_032894435 XP_032750326 zinc finger and BTB domain-containing protein 45 protein-coding 625927327 LOC116910445 uncharacterized LOC116910445 9 892469 895161 - 116910445 MODEL JAAIVD010000002;XR_004389152 ncrna 625927331 Uchl3 ubiquitin C-terminal hydrolase L3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); peptidase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to insulin stimulus (ortholog); eating behavior (ortholog); ASSOCIATED WITH Deglutition Disorders (ortholog); Neoplasm Metastasis (ortholog); Nerve Degeneration (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 12 22890553 22932681 - 22301074;30032202 116913366 MODEL JAAIVD010000007;XM_032917531 XP_032773422 ubiquitin carboxyl-terminal hydrolase isozyme L3 protein-coding 625927344 LOC116899725 zinc finger protein 431-like 4 182343682 182357120 - 22301074 116899725 MODEL JAAIVD010000003;XM_032901766 XP_032757657 protein-coding 625927351 Eif2b1 eukaryotic translation initiation factor 2B subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); negative regulation of guanyl-nucleotide exchange factor activity (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) 16 29294907 29303810 + 30032202 116885394 MODEL JAAIVD010000004;XM_032886674 XP_032742565 translation initiation factor eIF-2B subunit alpha protein-coding 625927364 LOC116900153 cytochrome P450 2J6 1 59148983 59176037 - 22301074;30032202 116900153 MODEL JAAIVD010000025;XM_032901923;XM_032901926 XP_032757814;XP_032757817 protein-coding 625927381 Wdr53 WD repeat domain 53 4 17059915 17068588 + 22301074 116898768 MODEL JAAIVD010000003;XM_032900101;XM_032900102;XM_032900103;XM_032900104;XM_032900105 XP_032755992;XP_032755993;XP_032755994;XP_032755995;XP_032755996 WD repeat-containing protein 53 protein-coding 625927403 LOC116901193 endonuclease G, mitochondrial 5 5448301 5450929 - 22301074;30032202 116901193 MODEL JAAIVD010000023;XM_032902886 XP_032758777 protein-coding 625927410 LOC116889752 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 149013705 149014152 + 116889752 MODEL JAAIVD010000025 pseudo 625927411 LOC116887265 olfactory receptor 2B11-like 18 11231209 11244934 - 22301074 116887265 MODEL JAAIVD010000013;XM_032888832 XP_032744723 protein-coding 625927421 LOC116883190 macrophage migration inhibitory factor-like 14 35620648 35620930 + 116883190 MODEL JAAIVD010000009 pseudo 625927422 LOC116910709 small nucleolar RNA SNORA17 9 44385155 44385286 - 116910709 MODEL JAAIVD010000002;XR_004389236 snorna 625927425 LOC116894300 uncharacterized LOC116894300 2 139338142 139347245 - 116894300 MODEL JAAIVD010000001;XR_004387021 ncrna 625927430 LOC116888314 transformer-2 protein homolog beta-like 1 85007787 85008342 + 116888314 MODEL JAAIVD010000025 pseudo 625927431 LOC116892031 uncharacterized LOC116892031 2 139973091 140011848 + 116892031 MODEL JAAIVD010000001;XR_004386901;XR_004386902;XR_004386903 ncrna 625927445 LOC116891963 uncharacterized LOC116891963 2 124767391 124779654 + 116891963 MODEL JAAIVD010000001;XR_004386879;XR_004386880;XR_004386881 ncrna 625927455 LOC116895477 uncharacterized LOC116895477 3 92495900 92509872 - 116895477 MODEL JAAIVD010000012;XR_004387280 ncrna 625927460 LOC116910299 peroxiredoxin-6-like 9 48497888 48499459 - 22301074;30032202 116910299 MODEL JAAIVD010000002;XM_032914168 XP_032770059 protein-coding 625927464 Nova1 uncharacterized LOC116905012 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 60574357 60699951 - 30032202 116905012 MODEL JAAIVD010000026;XM_032907699;XM_032907700;XM_032907701;XM_032907702;XM_032907703 XP_032763590;XP_032763591;XP_032763592;XP_032763593;XP_032763594 RNA-binding protein Nova-1 protein-coding 625927484 Dnmt3a DNA methyltransferase 3 alpha ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); PARTICIPATES IN DNA modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN catalytic complex (ortholog); chromosome, centromeric region (ortholog); cytoplasm (ortholog) 7 24482595 24583861 + 30032202 116905636 MODEL JAAIVD010000026;XM_032908615 XP_032764506 DNA (cytosine-5)-methyltransferase 3A protein-coding 625927513 Rps26 ribosomal protein S26 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of RNA splicing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 10 (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic small ribosomal subunit (ortholog); ribosome (ortholog) 1 156100395 156101999 - 22301074;30032202 116906267 MODEL JAAIVD010000025;XM_032909159;XM_032909163 XP_032765050;XP_032765054 40S ribosomal protein S26 protein-coding 625927526 Thoc6 THO complex subunit 6 INVOLVED IN central nervous system development (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Beaulieu-Boycott-Innes Syndrome (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear speck (ortholog) 9 975557 980593 - 22301074;30032202 116908955 MODEL JAAIVD010000002;XM_032912414 XP_032768305 THO complex 6;THO complex subunit 6 homolog protein-coding 625927543 LOC116904164 thymosin beta-10-like 6 149108824 149109134 - 22301074;30032202 116904164 MODEL JAAIVD010000024;XM_032907061 XP_032762952 protein-coding 625927548 Slc36a4 solute carrier family 36 member 4 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-proline transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN L-alanine transport (ortholog); proline transport (ortholog); tryptophan transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; FOUND IN lysosomal membrane (ortholog) 8 11467487 11495749 + 30032202 116907025 MODEL JAAIVD010000027;XM_032909965 XP_032765856 proton-coupled amino acid transporter 4 protein-coding 625927563 Lrba LPS responsive beige-like anchor protein INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); ASSOCIATED WITH common variable immunodeficiency 8 (ortholog); coronin-1A deficiency (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 3 66792138 67335362 - 30032202 116896725 MODEL JAAIVD010000012;XM_032898147 XP_032754038 lipopolysaccharide-responsive and beige-like anchor protein protein-coding 625927624 LOC116902821 taste receptor type 2 member 107 6 16696929 16697855 + 22301074;30032202 116902821 MODEL JAAIVD010000024;XM_032905150 XP_032761041 protein-coding 625927627 Ptpn9 protein tyrosine phosphatase non-receptor type 9 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); positive regulation of protein localization to plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); neuron projection terminus (ortholog) 8 50897174 50977871 + 22301074 116906983 MODEL JAAIVD010000027;XM_032909910;XM_032909911;XM_032909912 XP_032765801;XP_032765802;XP_032765803 tyrosine-protein phosphatase non-receptor type 9 protein-coding 625927650 LOC116909787 uncharacterized LOC116909787 9 83907683 83912972 + 116909787 MODEL JAAIVD010000002;XR_004389096 ncrna 625927655 LOC116892343 zinc finger protein 14 2 165971866 166009904 + 30032202 116892343 MODEL JAAIVD010000001;XM_032893983;XM_032893985;XR_004386942;XR_004386943 XP_032749874;XP_032749876 zinc finger protein 82 protein-coding 625927674 Znf623 zinc finger protein 623 1 248259602 248268047 + 30032202 116912739 MODEL JAAIVD010000025;XM_032916884 XP_032772775 protein-coding 625927680 Cdh19 cadherin 19 10 85656401 85730890 + 22301074;30032202 116911656 MODEL JAAIVD010000005;XM_032915611 XP_032771502 cadherin-19 protein-coding 625927695 LOC116901258 heterogeneous nuclear ribonucleoprotein A1-like 5 10102577 10103920 + 22301074 116901258 MODEL JAAIVD010000023;XM_032903015 XP_032758906 protein-coding 625927700 LOC116900043 olfactory receptor 1361-like 5 14671154 14672140 - 22301074 116900043 MODEL JAAIVD010000023;XM_032901839 XP_032757730 protein-coding 625927703 Pnisr PNN interacting serine and arginine rich protein FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 121466796 121494119 - 30032202 116902899 MODEL JAAIVD010000025;XM_032905229;XM_032905235 XP_032761120;XP_032761126 arginine/serine-rich protein PNISR protein-coding 625927722 LOC116886318 zinc finger protein 280B-like 17 19544935 19546784 + 30032202 116886318 MODEL JAAIVD010000011;XM_032887760 XP_032743651 protein-coding 625927727 Adamts9 ADAM metallopeptidase with thrombospondin type 1 motif 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); cornea development in camera-type eye (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 6 54012232 54183924 + 22301074;30032202 116903485 MODEL JAAIVD010000024;XM_032906059 XP_032761950 A disintegrin and metalloproteinase with thrombospondin motifs 9 protein-coding 625927770 Atxn10 ataxin 10 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); nervous system development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spinocerebellar ataxia type 10 (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cilium (ortholog) 1 254700521 254822642 + 30032202 116914627 MODEL JAAIVD010000025;XM_032919020 XP_032774911 ataxin-10 protein-coding 625927786 LOC116888820 complement factor H-related protein 4-like X 89562010 89610433 + 116888820 MODEL JAAIVD010000014;XM_032890098 XP_032745989 protein-coding 625927800 LOC116884338 60S ribosomal protein L23a-like 15 31888931 31889464 - 22301074;30032202 116884338 MODEL JAAIVD010000010;XM_032885472 XP_032741363 protein-coding 625927805 Sv2b synaptic vesicle glycoprotein 2B INVOLVED IN regulation of presynaptic cytosolic calcium ion concentration (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH kidney disease (ortholog); prostate cancer (ortholog); spinal muscular atrophy (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 2 125335326 125408225 + 22301074 116891964 MODEL JAAIVD010000001;XM_032893406 XP_032749297 protein-coding 625927821 LOC116894745 60S ribosomal protein L39-like 2 118835871 118836062 - 22301074;30032202 116894745 MODEL JAAIVD010000001;XM_032896421 XP_032752312 protein-coding 625927824 LOC116887055 olfactory receptor 2H2-like 18 10128848 10129786 - 22301074 116887055 MODEL JAAIVD010000013;XM_032888544 XP_032744435 protein-coding 625927827 LOC116906429 small nucleolar RNA SNORA48 7 18354438 18354581 - 116906429 MODEL JAAIVD010000026;XR_004388690 snorna 625927830 Nasp nuclear autoantigenic sperm protein ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN blastocyst development (ortholog); DNA replication-dependent chromatin assembly (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Female Infertility (ortholog); ovarian cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 1 40241508 40267082 - 30032202 116898382 MODEL JAAIVD010000025;XM_032899685;XM_032899687 XP_032755576;XP_032755578 protein-coding 625927852 LOC116895039 small nucleolar RNA SNORA17 2 201574507 201574633 + 116895039 MODEL JAAIVD010000001;XR_004387225 snorna 625927855 Pon1 paraoxonase 1 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); aryldialkylphosphatase activity (ortholog); arylesterase activity (ortholog); INVOLVED IN carboxylic acid catabolic process (ortholog); cholesterol metabolic process (ortholog); lactone catabolic process (ortholog); PARTICIPATES IN clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; organophosphate response pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN extracellular space (ortholog); high-density lipoprotein particle (ortholog); spherical high-density lipoprotein particle (ortholog) 6 133399244 133424209 + 22301074;30032202 116902979 MODEL JAAIVD010000024;XM_032905298;XM_032905299 XP_032761189;XP_032761190 serum paraoxonase/arylesterase 1 protein-coding 625927872 Rnf217 ring finger protein 217 ASSOCIATED WITH multiple sclerosis (ortholog) 2 205603681 205701348 - 22301074;30032202 116893546 MODEL JAAIVD010000001;XM_032895264 XP_032751155 probable E3 ubiquitin-protein ligase RNF217 protein-coding 625927882 Alk ALK receptor tyrosine kinase ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anaplastic large cell lymphoma (ortholog); Brain Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 7 21317511 21352336 + 22301074;30032202 116905950 MODEL JAAIVD010000026;XM_032908950;XM_032908951 XP_032764841;XP_032764842 ALK tyrosine kinase receptor protein-coding 625927903 LOC116910351 CMRF35-like molecule 3 9 69163045 69165929 - 30032202 116910351 MODEL JAAIVD010000002;XM_032914206 XP_032770097 protein-coding 625927907 Ankrd66 ankyrin repeat domain 66 4 86296262 86306337 + 22301074 116898055 MODEL JAAIVD010000003;XM_032899452 XP_032755343 ankyrin repeat domain-containing protein 66 protein-coding 625927914 Rabgap1 RAB GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); FOUND IN cytosol (ortholog) 5 15212037 15328913 + 116901357 MODEL JAAIVD010000023;XM_032903206;XM_032903207;XM_032903209 XP_032759097;XP_032759098;XP_032759100 rab GTPase-activating protein 1 protein-coding 625927950 LOC116886012 small nucleolar RNA SNORA76 16 24224848 24224964 - 116886012 MODEL JAAIVD010000004;XR_004386081 snorna 625927953 LOC116900870 glutathione S-transferase P-like 1 118588340 118612967 - 22301074;30032202 116900870 MODEL JAAIVD010000025;XM_032902571 XP_032758462 protein-coding 625927957 LOC116914352 putative protein FAM90A7P 13 64505959 64514658 - 116914352 MODEL JAAIVD010000008;XM_032918565 XP_032774456 protein-coding 625927964 LOC116907365 olfactory receptor 143-like 8 32064946 32065902 + 22301074;30032202 116907365 MODEL JAAIVD010000027;XM_032910316 XP_032766207 protein-coding 625927968 LOC116908637 40S ribosomal protein S2-like 1 183662089 183662955 + 116908637 MODEL JAAIVD010000025 pseudo 625927969 Wt1 WT1 transcription factor ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 5 83050897 83092351 + 22301074;30032202 116900521 MODEL JAAIVD010000023;XM_032902250;XM_032902251;XM_032902252 XP_032758141;XP_032758142;XP_032758143 Wilms tumor protein protein-coding 625927987 LOC116900314 olfactory receptor 8H1-like 5 64162834 64163775 - 22301074;30032202 116900314 MODEL JAAIVD010000023;XM_032902071 XP_032757962 protein-coding 625927990 LOC116894173 olfactory receptor 10A4 INVOLVED IN axon guidance (ortholog) 2 105223276 105224223 + 22301074 116894173 MODEL JAAIVD010000001;XM_032895889 XP_032751780 protein-coding 625927993 LOC116894486 CD177 antigen-like 2 170010307 170015395 + 30032202 116894486 MODEL JAAIVD010000001;XM_032896196 XP_032752087 protein-coding 625928002 Cdin1 CDAN1 interacting nuclease 1 INVOLVED IN erythrocyte differentiation (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type Ib (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 93789085 93987869 + 30032202 116901765 MODEL JAAIVD010000023;XM_032903901 XP_032759792 C5H15orf41 chromosome 5 C15orf41 homolog;protein C15orf41 homolog protein-coding 625928017 Hemgn hemogen INVOLVED IN regulation of osteoblast differentiation (ortholog); FOUND IN nucleoplasm (ortholog) 1 99474317 99492857 - 30032202 116888690 MODEL JAAIVD010000025;XM_032889984 XP_032745875 protein-coding 625928026 Tecpr1 tectonin beta-propeller repeat containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); macroautophagy (ortholog); ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN autophagosome membrane (ortholog); lysosomal membrane (ortholog); nucleoplasm (ortholog) 16 8968091 8996080 + 22301074 116885244 MODEL JAAIVD010000004;XM_032886482 XP_032742373 tectonin beta-propeller repeat-containing protein 1 protein-coding 625928055 LOC116902549 small nucleolar RNA SNORA48 5 135671936 135672074 - 116902549 MODEL JAAIVD010000023;XR_004388150 snorna 625928058 Gpr146 G protein-coupled receptor 146 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); defense response to virus (ortholog); positive regulation of cholesterol biosynthetic process (ortholog); FOUND IN plasma membrane (ortholog) 16 13806526 13808109 - 22301074 116885248 MODEL JAAIVD010000004;XM_032886487 XP_032742378 probable G-protein coupled receptor 146 protein-coding 625928063 Sec22c SEC22 homolog C, vesicle trafficking protein 8 112842348 112866470 - 30032202 116907974 MODEL JAAIVD010000027;XM_032911205 XP_032767096 vesicle-trafficking protein SEC22c protein-coding 625928074 Hsh2d hematopoietic SH2 domain containing ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of B cell apoptotic process (ortholog); negative regulation of mitochondrial depolarization (ortholog); T cell activation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 13 14021388 14033982 + 30032202 116914885 MODEL JAAIVD010000008;XM_032919325 XP_032775216 hematopoietic SH2 domain-containing protein protein-coding 625928084 Tmem151b transmembrane protein 151B ASSOCIATED WITH polycystic ovary syndrome (ortholog) 4 84346333 84351619 + 116899133 MODEL JAAIVD010000003;XM_032900667 XP_032756558 protein-coding 625928091 LOC116898363 transmembrane protein 258-like 4 58628906 58635903 - 22301074;30032202 116898363 MODEL JAAIVD010000003;XM_032899677 XP_032755568 protein-coding 625928095 LOC116914305 igE-binding protein-like 13 34372212 34375834 - 116914305 MODEL JAAIVD010000008 pseudo 625928096 Cacna1b calcium voltage-gated channel subunit alpha1 B ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); protein phosphatase 2A binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH brain edema (ortholog); Diabetic Nephropathies (ortholog); dystonia 23 (ortholog); FOUND IN axon terminus (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) 5 12441945 12605701 + 22301074;30032202 116901335 MODEL JAAIVD010000023;XM_032903164;XM_032903165 XP_032759055;XP_032759056 voltage-dependent N-type calcium channel subunit alpha-1B protein-coding 625928148 Cand1 cullin associated and neddylation dissociated 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of catalytic activity (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN neddylation pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 197155348 197196957 - 30032202 116909393 MODEL JAAIVD010000025;XM_032912957 XP_032768848 cullin-associated NEDD8-dissociated protein 1 protein-coding 625928167 LOC116894882 U6 spliceosomal RNA 2 36595001 36595099 + 116894882 MODEL JAAIVD010000001 pseudo 625928168 LOC116887366 olfactory receptor 1361-like 18 10196897 10197826 - 22301074;30032202 116887366 MODEL JAAIVD010000013;XM_032888962 XP_032744853 protein-coding 625928171 Rab17 RAB17, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde dendritic transport (ortholog); cilium assembly (ortholog); endocytic recycling (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) 4 162964689 162971699 - 22301074;30032202 116899632 MODEL JAAIVD010000003;XM_032901606 XP_032757497 ras-related protein Rab-17 protein-coding 625928180 LOC116887296 olfactory receptor 2D2-like 1 38341890 38342828 + 22301074 116887296 MODEL JAAIVD010000025;XM_032888880 XP_032744771 protein-coding 625928183 Orc4 origin recognition complex subunit 4 ENCODES a protein that exhibits DNA replication origin binding (ortholog); nucleotide binding (ortholog); INVOLVED IN DNA replication (ortholog); DNA replication initiation (ortholog); polar body extrusion after meiotic divisions (ortholog); ASSOCIATED WITH genetic disease (ortholog); Meier-Gorlin syndrome (ortholog); Meier-Gorlin syndrome 2 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 26761554 26794170 - 22301074;30032202 116901390 MODEL JAAIVD010000023;XM_032903261 XP_032759152 protein-coding 625928201 Rab14 RAB14, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN apical protein localization (ortholog); body fluid secretion (ortholog); early endosome to Golgi transport (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN alveolar lamellar body (ortholog); apical plasma membrane (ortholog); cilium (ortholog) 5 444327 465193 + 22301074;30032202 116901104 MODEL JAAIVD010000023;XM_032902667 XP_032758558 ras-related protein Rab-14 protein-coding 625928213 LOC116908858 keratin, type I cytoskeletal 15 9 54880310 54884137 - 22301074;30032202 116908858 MODEL JAAIVD010000002;XM_032912295;XM_032912297;XM_032912298 XP_032768186;XP_032768188;XP_032768189 protein-coding 625928232 LOC116894246 olfactory receptor 14A2-like 2 114584051 114584992 - 22301074 116894246 MODEL JAAIVD010000001;XM_032895952 XP_032751843 protein-coding 625928235 Bin1 bridging integrator 1 ENCODES a protein that exhibits actin filament binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); GTPase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); lipid tube assembly (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal dominant nonsyndromic deafness 22 (ortholog); autosomal recessive centronuclear myopathy (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) 15 11805337 11862135 - 22301074;30032202 116885000 MODEL JAAIVD010000010;XM_032886227;XM_032886228;XM_032886229;XM_032886230;XM_032886231;XM_032886232;XM_032886233 XP_032742118;XP_032742119;XP_032742120;XP_032742121;XP_032742122;XP_032742123;XP_032742124 myc box-dependent-interacting protein 1 protein-coding 625928270 LOC116883246 NACHT, LRR and PYD domains-containing protein 4E-like 14 66017522 66018259 + 116883246 MODEL JAAIVD010000009 pseudo 625928271 LOC116905509 glyceraldehyde-3-phosphate dehydrogenase-like 1 150541566 150553211 + 116905509 MODEL JAAIVD010000025 pseudo 625928272 Arhgef40 Rho guanine nucleotide exchange factor 40 ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 12 71898365 71919834 - 22301074 116914089 MODEL JAAIVD010000007;XM_032918402 XP_032774293 protein-coding 625928300 LOC116888230 dual specificity phosphatase 21 X 2299122 2299965 - 22301074 116888230 MODEL JAAIVD010000014;XM_032889517 XP_032745408 protein-coding 625928305 LOC116910415 60S ribosomal protein L17-like 9 42838209 42838880 + 116910415 MODEL JAAIVD010000002 pseudo 625928306 Rabepk Rab9 effector protein with kelch motifs ASSOCIATED WITH High Myopia (ortholog) 5 852564 872725 + 22301074 116901111 MODEL JAAIVD010000023;XM_032902679 XP_032758570 protein-coding 625928319 Opalin oligodendrocytic myelin paranodal and inner loop protein INVOLVED IN regulation of oligodendrocyte differentiation (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 2 40184874 40203277 - 30032202 116891158 MODEL JAAIVD010000001;XM_032891951 XP_032747842 protein-coding 625928329 LOC116898210 cytochrome b-c1 complex subunit 6, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); quinol-cytochrome-c reductase activity (ortholog); ASSOCIATED WITH Mitochondrial Complex III Deficiency Nuclear Type 11 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 39747161 39755112 - 22301074;30032202 116898210 MODEL JAAIVD010000025;XM_032899573 XP_032755464 protein-coding 625928337 Nsmce1 NSE1 component of SMC5/6 complex ENCODES a protein that exhibits protein dimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); FOUND IN chromosome, centromeric region (ortholog); mitotic spindle pole (ortholog); nucleoplasm (ortholog) 2 76435377 76461410 + 22301074;30032202 116891538 MODEL JAAIVD010000001;XM_032892693;XM_032892694 XP_032748584;XP_032748585 NSE1 homolog, SMC5-SMC6 complex component;non-structural maintenance of chromosomes element 1 homolog protein-coding 625928352 Prickle2 prickle planar cell polarity protein 2 INVOLVED IN blastocyst formation (ortholog); embryonic brain development (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); FOUND IN apicolateral plasma membrane (ortholog); axon (ortholog); cytoplasm (ortholog) 6 54256174 54592306 + 22301074 116903486 MODEL JAAIVD010000024;XM_032906060;XM_032906061;XM_032906062;XM_032906064 XP_032761951;XP_032761952;XP_032761953;XP_032761955 prickle-like protein 2 protein-coding 625928372 LOC116890613 U1 spliceosomal RNA 1 249596566 249596723 - 116890613 MODEL JAAIVD010000025;XR_004386764 snrna 625928375 Mast4 microtubule associated serine/threonine kinase family member 4 ASSOCIATED WITH Sertoli cell-only syndrome (ortholog); West syndrome (ortholog) 3 193960540 194550657 + 22301074;30032202 116897238 MODEL JAAIVD010000012;XM_032898965;XM_032898966;XM_032898967;XM_032898968 XP_032754856;XP_032754857;XP_032754858;XP_032754859 microtubule-associated serine/threonine-protein kinase 4 protein-coding 625928418 Npvf neuropeptide VF precursor ENCODES a protein that exhibits neuropeptide activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of gonadotropin secretion (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN extracellular space (ortholog) 6 90456427 90460083 + 30032202 116902838 MODEL JAAIVD010000024;XM_032905168 XP_032761059 pro-FMRFamide-related neuropeptide VF protein-coding 625928425 Gpr157 G protein-coupled receptor 157 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian behavior (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); radial glial cell differentiation (ortholog); FOUND IN ciliary membrane (ortholog) 1 10656866 10672405 - 22301074;30032202 116886153 MODEL JAAIVD010000025;XM_032887519 XP_032743410 G-protein coupled receptor 157 protein-coding 625928433 LOC116884526 uncharacterized LOC116884526 15 64767935 64770002 - 116884526 MODEL JAAIVD010000010;XR_004385874 ncrna 625928437 LOC116903799 uncharacterized LOC116903799 6 88812747 88816684 - 116903799 MODEL JAAIVD010000024;XM_032906491;XR_004388296 XP_032762382 uncharacterized protein LOC116903799 protein-coding 625928447 Taf5l TATA-box binding protein associated factor 5 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog); nucleus (ortholog) 17 43545912 43565777 - 22301074;30032202 116886092 MODEL JAAIVD010000011;XM_032887416;XM_032887417 XP_032743307;XP_032743308 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L protein-coding 625928458 LOC116912486 maestro heat-like repeat family member 5 1 246518429 246593200 - 30032202 116912486 MODEL JAAIVD010000025;XM_032916560 XP_032772451 protein-coding 625928492 Cipc CLOCK interacting pacemaker INVOLVED IN negative regulation of circadian rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 7 101035349 101052267 + 22301074;30032202 116905312 MODEL JAAIVD010000026;XM_032908196;XM_032908197;XM_032908198;XM_032908199;XM_032908200;XM_032908201 XP_032764087;XP_032764088;XP_032764089;XP_032764090;XP_032764091;XP_032764092 CLOCK-interacting pacemaker protein-coding 625928515 Ccdc74b coiled-coil domain containing 74B 4 2893054 2897387 + 116898650 MODEL JAAIVD010000003;XM_032899880 XP_032755771 coiled-coil domain-containing protein 74B protein-coding 625928526 LOC116888158 fibrous sheath-interacting protein 2-like X 113530287 113572523 - 116888158 MODEL JAAIVD010000014;XM_032889482 XP_032745373 protein-coding 625928550 LOC116906999 solute carrier family 5 member 4A-like 8 106962116 107006930 - 22301074;30032202 116906999 MODEL JAAIVD010000027;XM_032909928 XP_032765819 protein-coding 625928570 Esrra estrogen related receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); intercellular bridge (ortholog) 2 872782 882909 + 22301074 116894819 MODEL JAAIVD010000001;XM_032896491 XP_032752382 steroid hormone receptor ERR1 protein-coding 625928581 Fndc5 fibronectin type III domain containing 5 INVOLVED IN positive regulation of brown fat cell differentiation (ortholog); response to muscle activity (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 1 28996064 29003346 - 22301074;30032202 116896273 MODEL JAAIVD010000025;XM_032897355 XP_032753246 fibronectin type III domain-containing protein 5 protein-coding 625928591 Cdkn1a cyclin dependent kinase inhibitor 1A ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to amino acid starvation (ortholog); cellular response to cell-matrix adhesion (ortholog); PARTICIPATES IN G1/S transition pathway; Notch signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); Acute Experimental Pancreatitis (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 4770865 4776889 - 22301074;30032202 116887218 MODEL JAAIVD010000013;XM_032888778 XP_032744669 cyclin-dependent kinase inhibitor 1 protein-coding 625928598 LOC116890293 U2 spliceosomal RNA 1 107019408 107019591 - 116890293 MODEL JAAIVD010000025;XR_004386534 snrna 625928601 LOC116910951 talin rod domain-containing protein 1-like 10 80640536 80654124 - 116910951 MODEL JAAIVD010000005 pseudo 625928602 LOC116904254 NEDD8-conjugating enzyme Ubc12-like 6 29196894 29207801 + 116904254 MODEL JAAIVD010000024 pseudo 625928603 LOC116895444 heterogeneous nuclear ribonucleoprotein A3-like 3 71146446 71147498 + 116895444 MODEL JAAIVD010000012 pseudo 625928604 LOC116887422 rano class II histocompatibility antigen, B-1 beta chain-like 18 8031857 8036914 - 22301074;30032202 116887422 MODEL JAAIVD010000013;XM_032889038 XP_032744929 protein-coding 625928614 Egr4 early growth response 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog) 6 60690005 60692475 + 30032202 116903570 MODEL JAAIVD010000024;XM_032906189 XP_032762080 early growth response protein 4 protein-coding 625928620 C2H6orf118 chromosome 2 C6orf118 homolog 2 187819887 187843727 + 116894627 MODEL JAAIVD010000001;XM_032896345 XP_032752236 uncharacterized protein C6orf118 homolog protein-coding 625928633 LOC116902875 prolactin-inducible protein homolog 6 98578582 98582888 + 22301074;30032202 116902875 MODEL JAAIVD010000024;XM_032905206 XP_032761097 protein-coding 625928641 Pdcd10 programmed cell death 10 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN cellular response to anoxia (ortholog); cellular response to leukemia inhibitory factor (ortholog); establishment of Golgi localization (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cavernous hemangioma (ortholog); Central Nervous System Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 78338868 78380945 + 30032202 116896777 MODEL JAAIVD010000012;XM_032898237;XM_032898238 XP_032754128;XP_032754129 programmed cell death protein 10 protein-coding 625928658 LOC116888375 high mobility group protein B4-like X 77975280 77976090 + 116888375 MODEL JAAIVD010000014 pseudo 625928659 Steap3 STEAP3 metalloreductase ENCODES a protein that exhibits cupric reductase (NADH) activity (ortholog); FAD binding (ortholog); ferric-chelate reductase (NADPH) activity (ortholog); INVOLVED IN copper ion import (ortholog); establishment of localization in cell (ortholog); exosomal secretion (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH COVID-19 (ortholog); Hypochromic Microcytic Anemia with Iron Overload (ortholog); Hypochromic Microcytic Anemia with Iron Overload 2 (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) 10 12804380 12844083 - 30032202 116911371 MODEL JAAIVD010000005;XM_032915300;XM_032915301;XM_032915302;XM_032915303 XP_032771191;XP_032771192;XP_032771193;XP_032771194 metalloreductase STEAP3 protein-coding 625928675 LOC116893286 Y-box-binding protein 1-like 2 148116621 148117560 + 116893286 MODEL JAAIVD010000001 pseudo 625928676 Ccdc33 coiled-coil domain containing 33 FOUND IN peroxisome (ortholog) 8 51897208 51996479 - 30032202 116907776 MODEL JAAIVD010000027;XM_032910919 XP_032766810 coiled-coil domain-containing protein 33 protein-coding 625928699 LOC116886466 metallothionein-4 17 1047676 1049752 + 22301074;30032202 116886466 MODEL JAAIVD010000011;XM_032887968 XP_032743859 protein-coding 625928706 Emc8 ER membrane protein complex subunit 8 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) 17 40301345 40311130 - 22301074;30032202 116886099 MODEL JAAIVD010000011;XM_032887428 XP_032743319 protein-coding 625928715 LOC116901520 serine/arginine-rich splicing factor 3-like 5 50660513 50662931 - 116901520 MODEL JAAIVD010000023 pseudo 625928716 Pam peptidylglycine alpha-amidating monooxygenase ENCODES a protein that exhibits calcium ion binding (ortholog); chromatin binding (ortholog); copper ion binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); fatty acid primary amide biosynthetic process (ortholog); heart development (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH anxiety disorder (ortholog); Brain Hypoxia (ortholog); Experimental Arthritis (ortholog); FOUND IN cell surface (ortholog); chromatin (ortholog); condensed chromosome (ortholog) 4 168442963 168702758 + 22301074;30032202 116899682 MODEL JAAIVD010000003;XM_032901702 XP_032757593 peptidyl-glycine alpha-amidating monooxygenase protein-coding 625928747 LOC116888363 uncharacterized LOC116888363 X 33359481 33363076 - 116888363 MODEL JAAIVD010000014;XR_004386305 ncrna 625928751 Arg2 arginase 2 ENCODES a protein that exhibits arginase activity (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-4 (ortholog); PARTICIPATES IN urea cycle pathway; ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog) 7 93238244 93263293 + 22301074;30032202 116905205 MODEL JAAIVD010000026;XM_032908018 XP_032763909 arginase-2, mitochondrial protein-coding 625928763 Ltk leukocyte receptor tyrosine kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 5 97919114 97927685 - 22301074;30032202 116901820 MODEL JAAIVD010000023;XM_032903978 XP_032759869 leukocyte tyrosine kinase receptor protein-coding 625928787 Spag6 sperm associated antigen 6 FOUND IN axoneme (ortholog); microtubule cytoskeleton (ortholog); sperm principal piece (ortholog) 14 5287303 5327854 - 30032202 116883920 MODEL JAAIVD010000009;XM_032885178 XP_032741069 sperm-associated antigen 6 protein-coding 625928800 LOC116906998 stromelysin-1 8 3694511 3707067 + 22301074;30032202 116906998 MODEL JAAIVD010000027;XM_032909927 XP_032765818 protein-coding 625928813 Abca1 ATP binding cassette subfamily A member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein A-I receptor activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to cholesterol (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN altered reverse cholesterol transport pathway; retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 1 96823311 96948806 - 22301074;30032202 116901779 MODEL JAAIVD010000025;XM_032903924;XM_032903933;XM_032903941 XP_032759815;XP_032759824;XP_032759832 phospholipid-transporting ATPase ABCA1 protein-coding 625928872 Prep prolyl endopeptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); depressive disorder (ortholog); Disease Progression (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 18 44838582 44933683 + 22301074;30032202 116887087 MODEL JAAIVD010000013;XM_032888595 XP_032744486 protein-coding 625928891 LOC116909048 uncharacterized LOC116909048 9 64729729 64731015 - 116909048 MODEL JAAIVD010000002;XR_004389046 ncrna 625928895 Ptbp3 polypyrimidine tract binding protein 3 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of RNA splicing (ortholog); regulation of cell differentiation (ortholog) 1 91886503 91967503 + 22301074;30032202 116901503 MODEL JAAIVD010000025;XM_032903477;XM_032903484;XM_032903491;XM_032903499 XP_032759368;XP_032759375;XP_032759382;XP_032759390 polypyrimidine tract-binding protein 3 protein-coding 625928921 LOC116892019 uncharacterized LOC116892019 2 137720771 137723381 + 116892019 MODEL JAAIVD010000001;XR_004386889 ncrna 625928926 Cep70 centrosomal protein 70 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH orofacial cleft (ortholog); FOUND IN centrosome (ortholog) 8 90602566 90645917 + 30032202 116907151 MODEL JAAIVD010000027;XM_032910114;XM_032910115 XP_032766005;XP_032766006 centrosomal protein of 70 kDa protein-coding 625928949 Lyplal1 lysophospholipase like 1 ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); negative regulation of Golgi to plasma membrane protein transport (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 10 64224507 64256182 - 30032202 116911563 MODEL JAAIVD010000005;XM_032915553 XP_032771444 lysophospholipase-like protein 1 protein-coding 625928958 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42524369 42524450 - 116884192 MODEL JAAIVD010000009 trna 625928959 C18H10orf105 chromosome 18 C10orf105 homolog ASSOCIATED WITH autosomal recessive nonsyndromic deafness 12 (ortholog); Usher syndrome (ortholog) 18 26218987 26222578 + 116886926 MODEL JAAIVD010000013;XM_032888407 XP_032744298 uncharacterized protein C10orf105 homolog protein-coding 625928965 Sgo2 shugoshin 2 INVOLVED IN female meiotic nuclear division (ortholog); intracellular protein localization (ortholog); male meiotic nuclear division (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) 4 134370799 134395226 - 30032202 116899435 MODEL JAAIVD010000003;XM_032901189 XP_032757080 protein-coding 625928978 LOC116909203 transcription factor BTF3 homolog 4-like 9 87778631 87779119 + 116909203 MODEL JAAIVD010000002 pseudo 625928979 Znf783 zinc finger protein 783 ENCODES a protein that exhibits identical protein binding (ortholog) 6 92938887 92944476 - 22301074 116904387 MODEL JAAIVD010000024;XM_032907254 XP_032763145 protein ZNF783;zinc finger family member 783 protein-coding 625928987 LOC116902528 small nucleolar RNA SNORA70 5 134987764 134987882 - 116902528 MODEL JAAIVD010000023 pseudo 625928988 Atf6 activating transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); enzyme binding (ortholog); INVOLVED IN eye development (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of ATF6-mediated unfolded protein response (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH achromatopsia (ortholog); achromatopsia 7 (ortholog); asbestosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 10 49905781 50060215 - 30032202 116910844 MODEL JAAIVD010000005;XM_032914594 XP_032770485 cyclic AMP-dependent transcription factor ATF-6 alpha protein-coding 625929008 LOC116913250 60S ribosomal protein L12-like 12 80488486 80489046 + 116913250 MODEL JAAIVD010000007 pseudo 625929009 LOC116889692 chaperone protein DnaJ-like 22301074;30032202 116889692 MODEL JAAIVD010000052;XM_032890579 XP_032746470 protein-coding 625929010 LOC116909388 E3 ubiquitin-protein transferase MAEA 1 197083859 197085139 + 22301074;30032202 116909388 MODEL JAAIVD010000025;XM_032912946 XP_032768837 protein-coding 625929015 LOC116902284 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 7-like 5 145543090 145549777 + 22301074;30032202 116902284 MODEL JAAIVD010000023;XM_032904715 XP_032760606 protein-coding 625929022 Dsp desmoplakin ENCODES a protein that exhibits protein kinase C binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN adherens junction organization (ortholog); bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); cell-cell junction (ortholog) 14 57196761 57244459 + 22301074;30032202 116883396 MODEL JAAIVD010000009;XM_032884523;XM_032884524 XP_032740414;XP_032740415 protein-coding 625929054 Oscar osteoclast associated Ig-like receptor ENCODES a protein that exhibits collagen receptor activity (ortholog); INVOLVED IN Fc-gamma receptor signaling pathway (ortholog); multinuclear osteoclast differentiation (ortholog); osteoclast differentiation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); FOUND IN cell surface (ortholog) 2 178193101 178198433 - 30032202 116893452 MODEL JAAIVD010000001;XM_032895217 XP_032751108 osteoclast-associated immunoglobulin-like receptor protein-coding 625929062 Cnksr3 CNKSR family member 3 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); positive regulation of sodium ion transport (ortholog) 2 195784600 195875824 + 22301074 116892869 MODEL JAAIVD010000001;XM_032894769 XP_032750660 connector enhancer of kinase suppressor of ras 3 protein-coding 625929079 Akip1 A-kinase interacting protein 1 INVOLVED IN substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); FOUND IN nucleoplasm (ortholog) 2 91756204 91764089 - 30032202 116891674 MODEL JAAIVD010000001;XM_032892929;XM_032892930;XM_032892931 XP_032748820;XP_032748821;XP_032748822 A-kinase-interacting protein 1 protein-coding 625929095 Nudt15 nudix hydrolase 15 ENCODES a protein that exhibits 8-oxo-7,8-dihydrodeoxyguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity (ortholog); 8-oxo-dGDP phosphatase activity (ortholog); INVOLVED IN dGTP catabolic process (ortholog); DNA protection (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH leukopenia (ortholog); neutropenia (ortholog); pancytopenia (ortholog) 12 50853008 50856869 + 30032202 116913604 MODEL JAAIVD010000007;XM_032917854 XP_032773745 nucleotide triphosphate diphosphatase NUDT15 protein-coding 625929102 Znf853 zinc finger protein 853 16 9850739 9857077 + 30032202 116885141 MODEL JAAIVD010000004;XM_032886325;XM_032886326;XM_032886327;XM_032886329 XP_032742216;XP_032742217;XP_032742218;XP_032742220 protein-coding 625929120 LOC116894257 olfactory receptor 13G1 2 115398316 115399239 - 22301074 116894257 MODEL JAAIVD010000001;XM_032895962 XP_032751853 protein-coding 625929123 LOC116897576 small nucleolar RNA SNORA17 3 82880926 82881051 + 116897576 MODEL JAAIVD010000012;XR_004387585 snorna 625929126 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 10005158 10005229 - 116890640 MODEL JAAIVD010000025 trna 625929127 LOC116897572 small nucleolar RNA SNORA17 3 7936681 7936813 - 116897572 MODEL JAAIVD010000012;XR_004387582 snorna 625929130 LOC116896770 heat shock protein HSP 90-beta-like 3 74767213 74769521 - 22301074;30032202 116896770 MODEL JAAIVD010000012;XM_032898228 XP_032754119 protein-coding 625929134 LOC116888767 olfactory receptor 13F1-like 1 102217414 102218372 - 22301074 116888767 MODEL JAAIVD010000025;XM_032890059 XP_032745950 protein-coding 625929137 Nlrx1 NLR family member X1 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 8 38809671 38823286 - 22301074;30032202 116907440 MODEL JAAIVD010000027;XM_032910411 XP_032766302 protein-coding 625929150 LOC116906972 vomeronasal type-2 receptor 116-like 8 34459264 34486372 - 116906972 MODEL JAAIVD010000027 pseudo 625929151 LOC116896106 loricrin-like 3 576466 578630 - 22301074 116896106 MODEL JAAIVD010000012;XM_032897073 XP_032752964 protein-coding 625929156 Jsrp1 junctional sarcoplasmic reticulum protein 1 INVOLVED IN skeletal muscle contraction (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 154072371 154077095 + 30032202 116904863 MODEL JAAIVD010000025;XM_032907458;XM_032907466 XP_032763349;XP_032763357 protein-coding 625929171 LOC116907384 olfactory receptor 145-like 8 31738330 31739274 + 22301074;30032202 116907384 MODEL JAAIVD010000027;XM_032910337 XP_032766228 protein-coding 625929174 Ggn gametogenetin ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN double-strand break repair (ortholog); embryo implantation (ortholog); gamete generation (ortholog); ASSOCIATED WITH spermatogenic failure 69 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); perinuclear region of cytoplasm (ortholog) 2 166820528 166824285 - 22301074;30032202 116892361 MODEL JAAIVD010000001;XM_032894015;XM_032894017 XP_032749906;XP_032749908 protein-coding 625929184 LOC116908095 pleckstrin homology domain-containing family F member 2-like 8 15331457 15332253 - 116908095 MODEL JAAIVD010000027 pseudo 625929185 LOC116884365 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 15 41036278 41037896 + 22301074;30032202 116884365 MODEL JAAIVD010000010;XM_032885490 XP_032741381 protein-coding 625929189 LOC116902783 multifunctional protein ADE2-like 6 76610405 76611667 + 116902783 MODEL JAAIVD010000024 pseudo 625929190 Lasp1 LIM and SH3 protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); monoatomic ion transmembrane transporter activity (ortholog); INVOLVED IN monoatomic ion transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Endometrial Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 9 56542863 56583020 - 30032202 116909510 MODEL JAAIVD010000002;XM_032913114 XP_032769005 LIM and SH3 domain protein 1 protein-coding 625929201 LOC116906274 40S ribosomal protein S21-like 7 127931054 127979585 + 116906274 MODEL JAAIVD010000026 pseudo 625929202 LOC116883580 histone H3 14 42746614 42747077 + 22301074;30032202 116883580 MODEL JAAIVD010000009;XM_032884760 XP_032740651 protein-coding 625929207 LOC116901051 60S ribosomal protein L38-like 5 134150109 134151041 - 116901051 MODEL JAAIVD010000023 pseudo 625929208 LOC116907110 olfactory receptor 7G2-like 8 14895222 14896187 + 22301074;30032202 116907110 MODEL JAAIVD010000027;XM_032910079 XP_032765970 protein-coding 625929211 LOC116884840 hsc70-interacting protein-like 15 64546465 64547557 - 116884840 MODEL JAAIVD010000010 pseudo 625929212 LOC116892369 uncharacterized LOC116892369 2 167113164 167115795 + 116892369 MODEL JAAIVD010000001;XR_004386948 ncrna 625929217 LOC116906144 ATP synthase subunit d, mitochondrial-like 7 93962051 93962572 - 116906144 MODEL JAAIVD010000026 pseudo 625929218 Ercc8 ERCC excision repair 8, CSA ubiquitin ligase complex subunit ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via classical nonhomologous end joining (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 1A (ortholog); Cockayne syndrome (ortholog); Cockayne syndrome A (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); nuclear matrix (ortholog) 3 190253141 190292249 + 22301074;30032202 116897211 MODEL JAAIVD010000012;XM_032898920;XM_032898921 XP_032754811;XP_032754812 DNA excision repair protein ERCC-8 protein-coding 625929237 Vps37c VPS37C subunit of ESCRT-I ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); FOUND IN cilium (ortholog); ESCRT I complex (ortholog); Golgi apparatus (ortholog) 2 10167608 10196267 + 30032202 116890968 MODEL JAAIVD010000001;XM_032891630;XM_032891631;XM_032891632;XM_032891633 XP_032747521;XP_032747522;XP_032747523;XP_032747524 vacuolar protein sorting-associated protein 37C protein-coding 625929254 Acy3 aminoacylase 3 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); membrane (ortholog) 2 3647352 3650572 - 22301074;30032202 116890798 MODEL JAAIVD010000001;XM_032891276;XM_032891277 XP_032747167;XP_032747168 N-acyl-aromatic-L-amino acid amidohydrolase (carboxylate-forming) protein-coding 625929268 Cstb cystatin B ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); amyloid fibril formation (ortholog); negative regulation of proteolysis (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Dyskinesias (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 18 1711640 1713738 + 22301074;30032202 116887352 MODEL JAAIVD010000013;XM_032888946 XP_032744837 cystatin-B protein-coding 625929275 LOC116910944 cellular tumor antigen p53-like 10 76160013 76161733 + 116910944 MODEL JAAIVD010000005 pseudo 625929276 Btbd10 BTB domain containing 10 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 2 88156587 88214108 + 22301074;30032202 116891642 MODEL JAAIVD010000001;XM_032892862;XM_032892863;XM_032892864;XM_032892865;XM_032892866;XM_032892867;XM_032892868;XM_032892869;XM_032892870 XP_032748753;XP_032748754;XP_032748755;XP_032748756;XP_032748757;XP_032748758;XP_032748759;XP_032748760;XP_032748761 BTB/POZ domain-containing protein 10 protein-coding 625929310 Tymp thymidine phosphorylase ENCODES a protein that exhibits protein homodimerization activity (ortholog); thymidine phosphorylase activity (ortholog); INVOLVED IN dTMP catabolic process (ortholog); obsolete mitochondrial genome maintenance (ortholog); pyrimidine nucleoside metabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH 2-aminoadipic 2-oxoadipic aciduria (ortholog); Breast Neoplasms (ortholog); carcinoma (ortholog) 1 258672522 258675666 - 22301074;30032202 116915106 MODEL JAAIVD010000025;XM_032919539 XP_032775430 protein-coding 625929323 Afp alpha fetoprotein INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Alpha-Fetoprotein Deficiency (ortholog); Alpha-Fetoprotein, Hereditary Persistence of (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 11 3934395 3952251 + 22301074;30032202 116912243 MODEL JAAIVD010000006;XM_032916222 XP_032772113 alpha-fetoprotein protein-coding 625929342 LOC116915180 small nucleolar RNA SNORA71 13 2300310 2300440 + 116915180 MODEL JAAIVD010000008;XR_004389839 snorna 625929345 Irag2 inositol 1,4,5-triphosphate receptor associated 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN nucleus organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 6 2895110 2935124 + 30032202 116903668 MODEL JAAIVD010000024;XM_032906328 XP_032762219 lymphoid-restricted membrane protein protein-coding 625929368 LOC116897762 major urinary protein-like 4 58839 62268 - 30032202 116897762 MODEL JAAIVD010000003;XM_032899189;XM_032899191;XM_032899192;XM_032899193;XM_032899194 XP_032755080;XP_032755082;XP_032755083;XP_032755084;XP_032755085 protein-coding 625929403 LOC116910868 josephin-1-like 10 75430638 75431228 - 116910868 MODEL JAAIVD010000005 pseudo 625929404 LOC116888383 40S ribosomal protein S24-like X 2731667 2732246 + 116888383 MODEL JAAIVD010000014 pseudo 625929405 Tmem200c transmembrane protein 200C 4 178453958 178459916 + 116899703 MODEL JAAIVD010000003;XM_032901728 XP_032757619 protein-coding 625929411 LOC116911753 uncharacterized LOC116911753 10 90731500 90744115 + 116911753 MODEL JAAIVD010000005;XR_004389337 ncrna 625929416 LOC116902654 U4 spliceosomal RNA 5 90106941 90107115 + 116902654 MODEL JAAIVD010000023 pseudo 625929417 LOC116913233 adenosylhomocysteinase-like 12 72284593 72285899 + 116913233 MODEL JAAIVD010000007 pseudo 625929418 Slc16a10 solute carrier family 16 member 10 ENCODES a protein that exhibits aromatic amino acid transmembrane transporter activity (ortholog); L-phenylalanine transmembrane transporter activity (ortholog); L-tryptophan transmembrane transporter activity (ortholog); INVOLVED IN aromatic amino acid transport (ortholog); thyroid hormone generation (ortholog); thyroid hormone transport (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); plasma membrane (ortholog) 18 39834325 39940245 - 22301074;30032202 116887516 MODEL JAAIVD010000013;XM_032889139 XP_032745030 monocarboxylate transporter 10 protein-coding 625929428 Kcnk1 potassium two pore domain channel subfamily K member 1 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); ligand-gated channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); chloride transmembrane transport (ortholog); glutamate secretion (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Chronic Periodontitis (ortholog); Deafness (ortholog); Hyperplasia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); endosome (ortholog) 17 45508744 45546415 + 22301074;30032202 116886212 MODEL JAAIVD010000011;XM_032887602 XP_032743493 potassium channel subfamily K member 1 protein-coding 625929435 LOC116889506 small nucleolar RNA SNORA17 X 66626523 66626658 - 116889506 MODEL JAAIVD010000014;XR_004386452 snorna 625929438 LOC116905381 serine protease inhibitor A3K 7 115397102 115406016 - 30032202 116905381 MODEL JAAIVD010000026;XM_032908319 XP_032764210 protein-coding 625929447 Slc35f5 solute carrier family 35 member F5 10 9435352 9465528 + 22301074;30032202 116911076 MODEL JAAIVD010000005;XM_032914855;XM_032914856;XM_032914858 XP_032770746;XP_032770747;XP_032770749 protein-coding 625929471 LOC116912952 small nucleolar RNA SNORA70 11 5875405 5875541 + 116912952 MODEL JAAIVD010000006;XR_004389519 snorna 625929474 Slc44a3 solute carrier family 44 member 3 3 38326096 38403116 + 22301074;30032202 116896309 MODEL JAAIVD010000012;XM_032897396;XM_032897397 XP_032753287;XP_032753288 choline transporter-like protein 3 protein-coding 625929497 LOC116890548 small nucleolar RNA SNORA17 1 116923670 116923801 + 116890548 MODEL JAAIVD010000025;XR_004386724 snorna 625929500 LOC116890385 U6 spliceosomal RNA 1 265699537 265699636 + 116890385 MODEL JAAIVD010000025 pseudo 625929501 Ramac RNA guanine-7 methyltransferase activating subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); molecular function activator activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; FOUND IN mRNA cap methyltransferase RNMT:RAMAC complex (ortholog); mRNA capping enzyme complex (ortholog); nucleus (ortholog) 2 118503874 118510675 - 22301074;30032202 116891899 MODEL JAAIVD010000001;XM_032893315 XP_032749206 RNA guanine-N7 methyltransferase activating subunit protein-coding 625929508 Fancb FA complementation group B INVOLVED IN bone marrow development (ortholog); cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog) X 25524540 25541340 + 30032202 116889029 MODEL JAAIVD010000014;XM_032890229 XP_032746120 Fanconi anemia group B protein protein-coding 625929521 Krt24 keratin 24 9 55161581 55166497 + 22301074;30032202 116909145 MODEL JAAIVD010000002;XM_032912630 XP_032768521 keratin, type I cytoskeletal 24 protein-coding 625929531 LOC116885422 vomeronasal type-1 receptor 4-like 1 214751173 214752055 - 116885422 MODEL JAAIVD010000025 pseudo 625929532 LOC116898599 zinc finger protein 431-like 4 182340318 182342701 - 30032202 116898599 MODEL JAAIVD010000003;XM_032899793 XP_032755684 protein-coding 625929539 Sntb2 syntrophin beta 2 PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 17 26656041 26736625 + 22301074;30032202 116886312 MODEL JAAIVD010000011;XM_032887754 XP_032743645 beta-2-syntrophin protein-coding 625929550 C3 complement C3 ENCODES a protein that exhibits antigen binding (ortholog); C5L2 anaphylatoxin chemotactic receptor binding (ortholog); chemokine activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); amyloid-beta clearance (ortholog); B cell activation (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); FOUND IN cell surface (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); extracellular region (ortholog) 4 88610382 88636268 - 22301074;30032202 116899215 MODEL JAAIVD010000003;XM_032900809 XP_032756700 protein-coding 625929595 LOC116905594 phosphate carrier protein, mitochondrial-like 7 7482461 7487146 + 116905594 MODEL JAAIVD010000026 pseudo 625929596 LOC116911335 uncharacterized LOC116911335 10 68174689 68190861 + 116911335 MODEL JAAIVD010000005 pseudo 625929597 Tasl TLR adaptor interacting with endolysosomal SLC15A4 INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of toll-like receptor 7 signaling pathway (ortholog); positive regulation of toll-like receptor 8 signaling pathway (ortholog); FOUND IN cytosol (ortholog); endolysosome membrane (ortholog); nucleoplasm (ortholog) X 44264609 44283925 + 22301074;30032202 116888997 MODEL JAAIVD010000014;XM_032890212 XP_032746103 CXHXorf21 chromosome X CXorf21 homolog;protein CXorf21 homolog protein-coding 625929603 Fam3b FAM3 metabolism regulating signaling molecule B INVOLVED IN insulin secretion (ortholog) 4 47063050 47094883 + 30032202 116898939 MODEL JAAIVD010000003;XM_032900355 XP_032756246 protein FAM3B protein-coding 625929615 Kbtbd2 kelch repeat and BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); gene expression (ortholog); glucose metabolic process (ortholog); FOUND IN cytoplasm (ortholog) 6 84289013 84311464 + 22301074 116903744 MODEL JAAIVD010000024;XM_032906428;XM_032906429;XM_032906430;XM_032906431;XM_032906432;XM_032906434 XP_032762319;XP_032762320;XP_032762321;XP_032762322;XP_032762323;XP_032762325 kelch repeat and BTB domain-containing protein 2 protein-coding 625929635 Ncoa5 nuclear receptor coactivator 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog) 5 152926965 152959722 + 30032202 116902338 MODEL JAAIVD010000023;XM_032904815 XP_032760706 protein-coding 625929647 Vps53 VPS53 subunit of GARP complex INVOLVED IN endocytic recycling (ortholog); lysosomal transport (ortholog); protein targeting to lysosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); microcephaly (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); EARP complex (ortholog); GARP complex (ortholog) 9 94770190 94892496 - 30032202 116910222 MODEL JAAIVD010000002;XM_032914111 XP_032770002 vacuolar protein sorting-associated protein 53 homolog protein-coding 625929673 Tmem59l transmembrane protein 59 like INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH ovarian cyst (ortholog) 13 12738209 12741955 - 116914742 MODEL JAAIVD010000008;XM_032919180;XM_032919181 XP_032775071;XP_032775072 transmembrane protein 59-like protein-coding 625929690 Myo1e myosin IE ENCODES a protein that exhibits actin filament binding (ortholog); ATP hydrolysis activity (ortholog); calmodulin binding (ortholog); INVOLVED IN endocytosis (ortholog); glomerular basement membrane development (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH benign familial hematuria (ortholog); COVID-19 (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN adherens junction (ortholog); brush border (ortholog); clathrin-coated endocytic vesicle (ortholog) 8 64571875 64760376 + 22301074;30032202 116906541 MODEL JAAIVD010000027;XM_032909239 XP_032765130 unconventional myosin-Ie protein-coding 625929722 Ift81 intraflagellar transport 81 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); ciliopathy (ortholog); Dwarfism (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 16 31208683 31305556 + 30032202 116885493 MODEL JAAIVD010000004;XM_032886783 XP_032742674 intraflagellar transport protein 81 homolog protein-coding 625929745 LOC116900845 60S ribosomal protein L18-like 5 58787992 58788556 - 116900845 MODEL JAAIVD010000023 pseudo 625929746 Tnnt3 troponin T3, fast skeletal type ENCODES a protein that exhibits actin binding (ortholog); calcium-dependent protein binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN positive regulation of calcium-dependent ATPase activity (ortholog); regulation of ATP-dependent activity (ortholog); regulation of striated muscle contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital myopathy (ortholog); distal arthrogryposis (ortholog); FOUND IN troponin complex (ortholog) 2 6960463 6977458 - 22301074;30032202 116890845 MODEL JAAIVD010000001;XM_032891374;XM_032891375;XM_032891376;XM_032891377;XM_032891378;XM_032891379;XM_032891380;XM_032891381;XM_032891382;XM_032891384;XM_032891385;XM_032891386;XM_032891387 XP_032747265;XP_032747266;XP_032747267;XP_032747268;XP_032747269;XP_032747270;XP_032747271;XP_032747272;XP_032747273;XP_032747275;XP_032747276;XP_032747277;XP_032747278 troponin T, fast skeletal muscle protein-coding 625929782 Ndufb8 NADH:ubiquinone oxidoreductase subunit B8 ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); Arsenic Poisoning (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 44053488 44058573 - 22301074;30032202 116891212 MODEL JAAIVD010000001;XM_032892047 XP_032747938 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8, mitochondrial protein-coding 625929791 LOC116892575 pregnancy-specific glycoprotein 22-like 2 171946197 171965125 - 30032202 116892575 MODEL JAAIVD010000001;XM_032894355 XP_032750246 protein-coding 625929800 Pgrmc1 progesterone receptor membrane component 1 ENCODES a protein that exhibits heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); cataract (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell body (ortholog); mitochondrial outer membrane (ortholog); neuron projection (ortholog) X 102754337 102762335 + 30032202 116888627 MODEL JAAIVD010000014;XM_032889924 XP_032745815 membrane-associated progesterone receptor component 1 protein-coding 625929807 Lrrc3c leucine rich repeat containing 3C 9 55787390 55788157 - 22301074;30032202 116909150 MODEL JAAIVD010000002;XM_032912636 XP_032768527 leucine-rich repeat-containing protein 3C protein-coding 625929810 LOC116914314 prothymosin alpha-like 13 41039800 41040236 + 30032202 116914314 MODEL JAAIVD010000008;XM_032918550 XP_032774441 protein-coding 625929814 Cask calcium/calmodulin dependent serine protein kinase ENCODES a protein that exhibits neurexin family protein binding (ortholog); PDZ domain binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN calcium ion import (ortholog); cerebral cortex development (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN apical dendrite (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) X 20506929 20897039 - 22301074;30032202 116889408 MODEL JAAIVD010000014;XM_032890511 XP_032746402 peripheral plasma membrane protein CASK protein-coding 625929845 LOC116889632 histone demethylase UTY-like Y 1964325 1986738 + 30032202 116889632 MODEL JAAIVD010000015;XM_032890545 XP_032746436 protein-coding 625929855 LOC116900881 olfactory receptor 5D13-like 5 69787332 69790223 - 22301074;30032202 116900881 MODEL JAAIVD010000023;XM_032902559 XP_032758450 protein-coding 625929859 Nudt4 nudix hydrolase 4 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); diphosphoinositol-polyphosphate diphosphatase activity (ortholog); snoRNA binding (ortholog); FOUND IN cytosol (ortholog) 1 174769754 174785946 - 30032202 116908497 MODEL JAAIVD010000025;XM_032911658;XM_032911669 XP_032767549;XP_032767560 diphosphoinositol polyphosphate phosphohydrolase 2 protein-coding 625929872 Prkcd protein kinase C delta ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); B cell proliferation (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN ceramide signaling pathway; eicosanoid signaling pathway; endothelin signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome type 3 (ortholog); brain ischemia (ortholog); Burns (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 6285154 6314774 - 22301074 116914467 MODEL JAAIVD010000008;XM_032918768 XP_032774659 protein kinase C delta type protein-coding 625929894 LOC116906472 small nucleolar RNA SNORA17 7 91906053 91906176 - 116906472 MODEL JAAIVD010000026 pseudo 625929895 LOC116904446 phospholipid scramblase 2-like 6 124905439 124949805 + 116904446 MODEL JAAIVD010000024 pseudo 625929896 Glra1 glycine receptor alpha 1 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); adult walking behavior (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH dystonia (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN calyx of Held (ortholog); endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog) 9 37928541 38019496 - 22301074;30032202 116909007 MODEL JAAIVD010000002;XM_032912478;XM_032912479;XM_032912480 XP_032768369;XP_032768370;XP_032768371 glycine receptor subunit alpha-1 protein-coding 625929918 Tpt1 tumor protein, translationally-controlled 1 ENCODES a protein that exhibits calcium ion binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of ectoderm development (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); response to virus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) 12 48567468 48570436 - 30032202 116913439 MODEL JAAIVD010000007;XM_032917639 XP_032773530 translationally-controlled tumor protein protein-coding 625929928 Irgc immunity related GTPase cinema INVOLVED IN positive regulation of flagellated sperm motility (ortholog); FOUND IN lipid droplet (ortholog); sperm flagellum (ortholog); sperm mitochondrial sheath (ortholog) 2 170281785 170285487 + 22301074;30032202 116894491 MODEL JAAIVD010000001;XM_032896200 XP_032752091 interferon-inducible GTPase 5 protein-coding 625929934 Fkbp5 FKBP prolyl isomerase 5 ENCODES a protein that exhibits heat shock protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); protein folding (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 18 5418543 5460703 + 22301074 116887064 MODEL JAAIVD010000013;XM_032888564 XP_032744455 peptidyl-prolyl cis-trans isomerase FKBP5 protein-coding 625929948 LOC116908019 40S ribosomal protein S11-like 8 95810327 95810813 - 116908019 MODEL JAAIVD010000027 pseudo 625929949 LOC116889414 cyclin-D-binding Myb-like transcription factor 1 X 80819447 80820784 - 30032202 116889414 MODEL JAAIVD010000014;XM_032890516 XP_032746407 protein-coding 625929952 LOC116890062 glyceraldehyde-3-phosphate dehydrogenase-like 1 213327322 213328323 - 116890062 MODEL JAAIVD010000025 pseudo 625929953 LOC116897817 RNA transcription, translation and transport factor protein-like 4 10427901 10556645 + 116897817 MODEL JAAIVD010000003 pseudo 625929954 LOC116894932 small nucleolar RNA SNORD115 2 140314110 140314194 - 116894932 MODEL JAAIVD010000001;XR_004387131 snorna 625929957 LOC116896525 uncharacterized LOC116896525 3 61178293 61179604 + 116896525 MODEL JAAIVD010000012;XR_004387342 ncrna 625929961 Pheta2 PH domain containing endocytic trafficking adaptor 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN endosome organization (ortholog); receptor recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); recycling endosome (ortholog) 1 252069448 252074040 + 30032202 116890158 MODEL JAAIVD010000025;XM_032890893 XP_032746784 sesquipedalian-2 protein-coding 625929967 Tcf25 TCF25 ribosome quality control complex subunit INVOLVED IN regulation of protein K48-linked ubiquitination (ortholog); rescue of stalled ribosome (ortholog); FOUND IN nucleus (ortholog); RQC complex (ortholog) 17 42981722 43013219 + 22301074;30032202 116886078 MODEL JAAIVD010000011;XM_032887393;XM_032887394;XM_032887395;XM_032887396;XM_032887397;XM_032887398 XP_032743284;XP_032743285;XP_032743286;XP_032743287;XP_032743288;XP_032743289 transcription factor 25 protein-coding 625929998 LOC116886231 acylcarnitine hydrolase-like 17 24795905 24803531 + 30032202 116886231 MODEL JAAIVD010000011;XM_032887637 XP_032743528 protein-coding 625930014 LOC116890059 ferritin light chain 1-like 1 210645705 210646271 + 116890059 MODEL JAAIVD010000025 pseudo 625930015 LOC116885388 cytochrome P450 3A18 16 7650119 7693177 + 22301074;30032202 116885388 MODEL JAAIVD010000004;XM_032886668 XP_032742559 protein-coding 625930030 Mn1 MN1 proto-oncogene, transcriptional regulator INVOLVED IN intramembranous ossification (ortholog); negative regulation of osteoblast proliferation (ortholog); positive regulation of vitamin D receptor signaling pathway (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial heart septal defect (ortholog); CEBALID Syndrome (ortholog); FOUND IN nucleus (ortholog) 16 42521426 42560063 - 30032202 116885403 MODEL JAAIVD010000004;XM_032886686 XP_032742577 transcriptional activator MN1 protein-coding 625930036 Ddx31 DEAD-box helicase 31 INVOLVED IN ribosome biogenesis (ortholog); FOUND IN Golgi apparatus (ortholog); nucleolus (ortholog) 5 7767216 7831883 - 22301074;30032202 116901224 MODEL JAAIVD010000023;XM_032902952 XP_032758843 probable ATP-dependent RNA helicase DDX31 protein-coding 625930060 LOC116887610 H-2 class I histocompatibility antigen, alpha chain-like 18 9532371 9537907 + 116887610 MODEL JAAIVD010000013 pseudo 625930061 LOC116887846 MLV-related proviral Env polyprotein-like X 41246477 41248409 - 116887846 MODEL JAAIVD010000014 pseudo 625930062 LOC116892790 vomeronasal type-2 receptor 116-like 2 186114844 186139140 + 22301074;30032202 116892790 MODEL JAAIVD010000001;XM_032894663 XP_032750554 protein-coding 625930071 LOC116893979 fMet-Leu-Phe receptor 2 100720464 100721665 + 28652375;30032202 116893979 A0A220QSC5 MODEL JAAIVD010000001;MF175622;XM_032895697 ASK09532;XP_032751588 Fpr1 protein-coding 625930075 Myd88 MYD88 innate immune signal transduction adaptor ENCODES a protein that exhibits ATP-dependent histone chaperone activity (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); anemia (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 110570698 110575741 - 22301074;30032202 116907910 MODEL JAAIVD010000027;XM_032911109 XP_032767000 myeloid differentiation primary response protein MyD88 protein-coding 625930086 Elavl2 ELAV like RNA binding protein 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); regulation of synapse assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); lung small cell carcinoma (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); synapse (ortholog) 1 62004477 62129252 + 22301074 116900236 MODEL JAAIVD010000025;XM_032901990;XM_032901998;XM_032902006;XM_032902012;XM_032902020;XM_032902027;XM_032902034;XM_032902041;XM_032902049;XM_032902056;XM_032902063;XM_032902070 XP_032757881;XP_032757889;XP_032757897;XP_032757903;XP_032757911;XP_032757918;XP_032757925;XP_032757932;XP_032757940;XP_032757947;XP_032757954;XP_032757961 ELAV-like protein 2 protein-coding 625930127 LOC116901628 A-kinase anchor protein 2 1 93685169 93729496 - 116901628 MODEL JAAIVD010000025;XM_032903708;XM_032903717;XM_032903725 XP_032759599;XP_032759608;XP_032759616 protein-coding 625930139 LOC116888076 proteasome subunit beta type-7-like 1 228413139 228413952 + 116888076 MODEL JAAIVD010000025 pseudo 625930140 LOC116902183 ER degradation-enhancing alpha-mannosidase-like protein 2 5 135048725 135076035 - 22301074;30032202 116902183 MODEL JAAIVD010000023;XM_032904546 XP_032760437 protein-coding 625930155 LOC116889442 U6 spliceosomal RNA X 100606758 100606862 + 116889442 MODEL JAAIVD010000014;XR_004386404 snrna 625930158 Psmd8 proteasome 26S subunit, non-ATPase 8 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog) 2 166813461 166820211 + 30032202 116892360 MODEL JAAIVD010000001;XM_032894014 XP_032749905 26S proteasome non-ATPase regulatory subunit 8 protein-coding 625930169 Gls2 glutaminase 2 INVOLVED IN reactive oxygen species metabolic process (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 1 155665285 155682703 + 22301074;30032202 116905897 MODEL JAAIVD010000025;XM_032908890;XM_032908897;XM_032908900;XM_032908907 XP_032764781;XP_032764788;XP_032764791;XP_032764798 glutaminase liver isoform, mitochondrial protein-coding 625930202 LOC116887882 uncharacterized LOC116887882 X 49308711 49311489 - 116887882 MODEL JAAIVD010000014 pseudo 625930203 Ttll2 tubulin tyrosine ligase like 2 2 186626651 186628429 + 30032202 116894620 MODEL JAAIVD010000001;XM_032896334 XP_032752225 probable tubulin polyglutamylase TTLL2 protein-coding 625930207 Cdc42ep4 CDC42 effector protein 4 INVOLVED IN cellular response to type II interferon (ortholog); positive regulation of pseudopodium assembly (ortholog); regulation of cell shape (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) 9 75554318 75578874 + 116909333 MODEL JAAIVD010000002;XM_032912873;XM_032912874;XM_032912875 XP_032768764;XP_032768765;XP_032768766 protein-coding 625930220 LOC116899905 small nucleolar RNA SNORD66 4 5505814 5505888 + 116899905 MODEL JAAIVD010000003;XR_004387877 snorna 625930223 Ism1 isthmin 1 INVOLVED IN negative regulation of angiogenesis (ortholog) 5 119004487 119082467 + 30032202 116902026 MODEL JAAIVD010000023;XM_032904301;XM_032904302 XP_032760192;XP_032760193 isthmin-1 protein-coding 625930236 LOC116907926 atherin-like 8 111128630 111133268 - 116907926 MODEL JAAIVD010000027;XM_032911138 XP_032767029 protein-coding 625930242 Tmem132c transmembrane protein 132C ASSOCIATED WITH megacolon (ortholog) 16 26372880 26480067 - 116885255 MODEL JAAIVD010000004;XM_032886493 XP_032742384 protein-coding 625930253 LOC116898375 small nuclear ribonucleoprotein E-like 4 66240900 66241169 + 116898375 MODEL JAAIVD010000003 pseudo 625930254 LOC116904648 U6 spliceosomal RNA 6 33359672 33359780 - 116904648 MODEL JAAIVD010000024;XR_004388351 snrna 625930257 Ube3c ubiquitin protein ligase E3C ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); protein K29-linked ubiquitination (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); NEURODEVELOPMENTAL DISORDER WITH ABSENT SPEECH AND MOVEMENT AND BEHAVIORAL ABNORMALITIES (ortholog) 6 158840443 158940469 - 22301074;30032202 116904248 MODEL JAAIVD010000024;XM_032907206 XP_032763097 ubiquitin-protein ligase E3C protein-coding 625930284 Sae1 SUMO1 activating enzyme subunit 1 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); protein heterodimerization activity (ortholog); small protein activating enzyme binding (ortholog); INVOLVED IN positive regulation of protein sumoylation (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); protein sumoylation (ortholog); FOUND IN nucleoplasm (ortholog); SUMO activating enzyme complex (ortholog) 2 172681357 172734736 + 30032202 116892598 MODEL JAAIVD010000001;XM_032894379 XP_032750270 SUMO-activating enzyme subunit 1 protein-coding 625930297 A4gnt alpha-1,4-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); negative regulation of epithelial cell proliferation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog) 8 90955560 90963880 + 30032202 116907759 MODEL JAAIVD010000027;XM_032910896;XM_032910897 XP_032766787;XP_032766788 protein-coding 625930306 LOC116912786 uncharacterized LOC116912786 11 7317236 7317746 - 116912786 MODEL JAAIVD010000006;XR_004389479 ncrna 625930310 Fgf6 fibroblast growth factor 6 INVOLVED IN cartilage condensation (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); myoblast differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN sarcolemma (ortholog) 6 20877514 20886026 - 22301074;30032202 116904579 MODEL JAAIVD010000024;XM_032907376 XP_032763267 protein-coding 625930316 Sult6b1 sulfotransferase family 6B member 1 7 14329672 14354433 + 22301074;30032202 116905898 MODEL JAAIVD010000026;XM_032908888 XP_032764779 sulfotransferase 6B1 protein-coding 625930326 LOC116902948 vomeronasal type-1 receptor 97 6 124051256 124053448 + 22301074;30032202 116902948 MODEL JAAIVD010000024;XM_032905273 XP_032761164 protein-coding 625930331 LOC116891281 39S ribosomal protein L2, mitochondrial-like 2 52470513 52471466 + 116891281 MODEL JAAIVD010000001 pseudo 625930332 Rapgef6 Rap guanine nucleotide exchange factor 6 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); positive regulation of microvillus assembly (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytosol (ortholog) 9 36974253 37137180 + 22301074;30032202 116908663 MODEL JAAIVD010000002;XM_032911940;XM_032911941;XM_032911943;XM_032911944;XM_032911945;XM_032911946;XM_032911947 XP_032767831;XP_032767832;XP_032767834;XP_032767835;XP_032767836;XP_032767837;XP_032767838 protein-coding 625930378 LOC116914468 60S ribosomal protein L13a-like 13 59230175 59230823 + 116914468 MODEL JAAIVD010000008;XR_004389749 pseudo 625930381 LOC116896014 annexin-2 receptor-like 3 176951484 176952096 + 116896014 MODEL JAAIVD010000012 pseudo 625930382 Mindy4 MINDY lysine 48 deubiquitinase 4 6 85756866 85861403 - 30032202 116903759 MODEL JAAIVD010000024;XM_032906447 XP_032762338 probable ubiquitin carboxyl-terminal hydrolase MINDY-4 protein-coding 625930404 LOC116893663 40S ribosomal protein S4, X isoform-like 2 11870792 11871542 + 116893663 MODEL JAAIVD010000001 pseudo 625930405 LOC116905724 pantothenate kinase 3-like 7 269885 272132 - 116905724 MODEL JAAIVD010000026 pseudo 625930406 Fgf1 fibroblast growth factor 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); branch elongation involved in ureteric bud branching (ortholog); cellular response to heat (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 15 6070376 6094010 + 22301074;30032202 116884682 MODEL JAAIVD010000010;XM_032885859;XM_032885860;XM_032885862 XP_032741750;XP_032741751;XP_032741753 protein-coding 625930420 Rnf169 ring finger protein 169 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); nucleosome binding (ortholog); ubiquitin-modified histone reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleolus (ortholog) 2 98207591 98266323 - 30032202 116891732 MODEL JAAIVD010000001;XM_032893031 XP_032748922 E3 ubiquitin-protein ligase RNF169 protein-coding 625930430 LOC116885041 small nucleolar RNA SNORA17 15 42390264 42390395 - 116885041 MODEL JAAIVD010000010;XR_004385927 snorna 625930433 LOC116890113 uncharacterized protein CXorf49 homolog 1 234511094 234512821 - 116890113 MODEL JAAIVD010000025;XM_032890855 XP_032746746 protein-coding 625930438 Bcl3 BCL3 transcription coactivator ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Dyslipidemias (ortholog); prion disease (ortholog); FOUND IN Bcl3-Bcl10 complex (ortholog); Bcl3/NF-kappaB2 complex (ortholog); ciliary basal body (ortholog) 2 170786463 170802258 + 22301074 116892509 MODEL JAAIVD010000001;XM_032894262;XM_032894263;XM_032894264 XP_032750153;XP_032750154;XP_032750155 B-cell lymphoma 3 protein protein-coding 625930457 Supt5h SPT5 homolog, DSIF elongation factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN DSIF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 167669750 167697705 + 22301074;30032202 116892398 MODEL JAAIVD010000001;XM_032894070;XM_032894071;XM_032894073 XP_032749961;XP_032749962;XP_032749964 transcription elongation factor SPT5 protein-coding 625930496 Ift57 intraflagellar transport 57 INVOLVED IN apoptotic process (ortholog); heart looping (ortholog); left/right pattern formation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Huntington's disease (ortholog); orofaciodigital syndrome XVIII (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 34112317 34168202 + 30032202 116898887 MODEL JAAIVD010000003;XM_032900264 XP_032756155 intraflagellar transport protein 57 homolog protein-coding 625930511 LOC116913690 40S ribosomal protein S11-like 12 19643573 19644054 + 116913690 MODEL JAAIVD010000007 pseudo 625930512 LOC116888278 ubiquitin-like protein 4A X 32838042 32838580 + 116888278 MODEL JAAIVD010000014 pseudo 625930513 LOC116911020 uncharacterized LOC116911020 10 34938484 34941465 - 116911020 MODEL JAAIVD010000005;XR_004389300 ncrna 625930518 Armc8 armadillo repeat containing 8 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 90820288 90913982 - 22301074;30032202 116907183 MODEL JAAIVD010000027;XM_032910142;XM_032910143;XM_032910144 XP_032766033;XP_032766034;XP_032766035 armadillo repeat-containing protein 8 protein-coding 625930547 LOC116901946 small nuclear ribonucleoprotein F-like 5 106974809 106975098 - 116901946 MODEL JAAIVD010000023 pseudo 625930548 LOC116885932 coiled-coil domain-containing protein 121-like 16 41528578 41530067 - 116885932 MODEL JAAIVD010000004;XM_032887245 XP_032743136 protein-coding 625930552 Jup junction plakoglobin ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 12 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) 9 59673791 59700113 - 22301074;30032202 116908819 MODEL JAAIVD010000002;XM_032912236;XM_032912237;XM_032912238 XP_032768127;XP_032768128;XP_032768129 protein-coding 625930576 LOC116905013 60S ribosomal protein L31-like 1 154284377 154286333 + 116905013 MODEL JAAIVD010000025 pseudo 625930577 Sbk1 SH3 domain binding kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); peptidyl-threonine phosphorylation (ortholog) 2 75654042 75698494 - 22301074;30032202 116891531 MODEL JAAIVD010000001;XM_032892680;XM_032892681 XP_032748571;XP_032748572 serine/threonine-protein kinase SBK1 protein-coding 625930588 Fam237a family with sequence similarity 237 member A 4 137568044 137572216 + 116898198 MODEL JAAIVD010000003;XM_032899560 XP_032755451 protein FAM237A protein-coding 625930592 LOC116887321 colipase 18 5298426 5300796 + 22301074;30032202 116887321 MODEL JAAIVD010000013;XM_032888914;XM_032888915 XP_032744805;XP_032744806 protein-coding 625930603 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889680 MODEL JAAIVD010000048 trna 625930604 Rnf149 ring finger protein 149 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); negative regulation of MAPK cascade (ortholog); regulation of protein stability (ortholog) 4 115792775 115819453 - 116899321 MODEL JAAIVD010000003;XM_032900987 XP_032756878 E3 ubiquitin-protein ligase RNF149 protein-coding 625930615 Scoc short coiled-coil protein INVOLVED IN positive regulation of macroautophagy (ortholog); regulation of protein complex stability (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 17 16785475 16813141 + 30032202 116886279 MODEL JAAIVD010000011;XM_032887703;XM_032887704;XM_032887705;XM_032887706 XP_032743594;XP_032743595;XP_032743596;XP_032743597 protein-coding 625930631 LOC116905491 uncharacterized LOC116905491 7 129160536 129164625 - 116905491 MODEL JAAIVD010000026;XR_004388544 ncrna 625930635 Twf1 twinfilin actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); ATP binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); conditioned place preference (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH lymphoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytosol (ortholog) 1 267465470 267475678 - 30032202 116884330 MODEL JAAIVD010000025;XM_032885467 XP_032741358 twinfilin-1 protein-coding 625930648 LOC116892054 NHP2-like protein 1 1 60243085 60246011 - 22301074;30032202 116892054 MODEL JAAIVD010000025;XM_032893557 XP_032749448 protein-coding 625930652 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41695453 41695524 + 116884211 MODEL JAAIVD010000009 trna 625930653 Msantd3 Myb/SANT DNA binding domain containing 3 1 101608531 101632307 + 116902083 MODEL JAAIVD010000025;XM_032904385;XM_032904390;XM_032904397 XP_032760276;XP_032760281;XP_032760288 myb/SANT-like DNA-binding domain-containing protein 3 protein-coding 625930666 Gabrb2 gamma-aminobutyric acid type A receptor subunit beta2 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); cochlea development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); developmental and epileptic encephalopathy 92 (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) 9 25286309 25493196 + 22301074;30032202 116909759 MODEL JAAIVD010000002;XM_032913444 XP_032769335 gamma-aminobutyric acid receptor subunit beta-2 protein-coding 625930681 Map3k20 mitogen-activated protein kinase kinase kinase 20 ENCODES a protein that exhibits ATP binding (ortholog); JUN kinase kinase kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV-B (ortholog); cytoskeleton organization (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH centronuclear myopathy (ortholog); centronuclear myopathy 6 with fiber-type disproportion (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 49597289 49756609 + 22301074;30032202 116901512 MODEL JAAIVD010000023;XM_032903486 XP_032759377 protein-coding 625930705 LOC116913038 U6 spliceosomal RNA 11 14927802 14927908 + 116913038 MODEL JAAIVD010000006;XR_004389575 snrna 625930708 LOC116908217 Y-box-binding protein 1-like 8 73227635 73310585 - 116908217 MODEL JAAIVD010000027 pseudo 625930709 Kat2b lysine acetyltransferase 2B ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); cellular response to insulin stimulus (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN cortisol signaling pathway; histone modification pathway; p53 signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Coronary Disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN A band (ortholog); actomyosin (ortholog); ATAC complex (ortholog) 4 90593304 90698762 + 22301074;30032202 116899226 MODEL JAAIVD010000003;XM_032900827 XP_032756718 histone acetyltransferase KAT2B protein-coding 625930731 LOC116895958 igE-binding protein-like 3 142654308 142655948 + 22301074 116895958 MODEL JAAIVD010000012;XM_032897009 XP_032752900 protein-coding 625930735 LOC116899968 60S ribosomal protein L6-like 5 114301663 114308098 + 116899968 MODEL JAAIVD010000023 pseudo 625930736 Tlr2 toll like receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); diacyl lipopeptide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acne (ortholog); acute kidney failure (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) 3 69727695 69733850 + 22301074;30032202 116896742 MODEL JAAIVD010000012;XM_032898180;XM_032898181 XP_032754071;XP_032754072 toll-like receptor 2 protein-coding 625930746 LOC116885992 60S ribosomal protein L27-like 1 4216575 4216958 + 116885992 MODEL JAAIVD010000025 pseudo 625930747 Col11a2 collagen type XI alpha 2 chain INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); collagen fibril organization (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 13 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal recessive nonsyndromic deafness 53 (ortholog); FOUND IN collagen trimer (ortholog); collagen type II trimer (ortholog) 18 8258095 8287355 - 22301074 116887438 MODEL JAAIVD010000013;XM_032889051 XP_032744942 collagen alpha-2(XI) chain protein-coding 625930817 LOC116912702 endogenous retrovirus group K member 10 Pro protein-like 11 19678221 19678970 - 116912702 MODEL JAAIVD010000006 pseudo 625930818 Slc44a1 solute carrier family 44 member 1 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); ethanolamine transport (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Childhood-onset Neurodegeneration with Ataxia, Tremor, Optic Atrophy, and Cognitive Decline (ortholog); high grade glioma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial outer membrane (ortholog) 1 97219802 97346586 + 22301074;30032202 116901796 MODEL JAAIVD010000025;XM_032903954 XP_032759845 choline transporter-like protein 1 protein-coding 625930838 Ccdc166 coiled-coil domain containing 166 1 248299497 248301120 - 116912841 MODEL JAAIVD010000025;XM_032917049 XP_032772940 coiled-coil domain-containing protein 166 protein-coding 625930844 Wbp1l WW domain binding protein 1 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); hemopoiesis (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH nevoid basal cell carcinoma syndrome (ortholog) 2 46070045 46125883 + 116891254 MODEL JAAIVD010000001;XM_032892134;XM_032892135 XP_032748025;XP_032748026 WW domain binding protein 1-like protein-coding 625930855 LOC116911954 uncharacterized LOC116911954 11 90649399 90689548 - 116911954 MODEL JAAIVD010000006;XR_004389412 ncrna 625930860 KEG97_t22 tRNA-Pro MT 15340 15407 - 64988248 trna 625930861 LOC116900413 olfactory receptor 4S2 5 70307689 70308645 + 22301074 116900413 MODEL JAAIVD010000023;XM_032902157 XP_032758048 protein-coding 625930864 LOC116896900 uncharacterized LOC116896900 3 108940835 108945801 + 116896900 MODEL JAAIVD010000012;XR_004387377 ncrna 625930869 LOC116915140 small nucleolar RNA SNORA17 13 15685564 15685683 + 116915140 MODEL JAAIVD010000008 pseudo 625930870 Noto notochord homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); embryonic pattern specification (ortholog) 6 60774704 60779409 - 22301074;30032202 116902969 MODEL JAAIVD010000024;XM_032905288 XP_032761179 homeobox protein notochord protein-coding 625930875 LOC116912686 40S ribosomal protein S11-like 11 16774126 16802140 - 30032202 116912686 MODEL JAAIVD010000006;XM_032916821 XP_032772712 protein-coding 625930879 Ms4a1 membrane spanning 4-domains A1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); immunoglobulin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 5 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); nucleoplasm (ortholog) 2 10716829 10730820 - 30032202 116893642 MODEL JAAIVD010000001;XM_032895356;XM_032895357;XM_032895358 XP_032751247;XP_032751248;XP_032751249 B-lymphocyte antigen CD20 protein-coding 625930899 LOC116898545 cofilin-1-like 4 150226924 150227420 + 116898545 MODEL JAAIVD010000003 pseudo 625930900 LOC116909451 histone deacetylase 1-like 9 14282027 14283490 + 116909451 MODEL JAAIVD010000002 pseudo 625930901 LOC116888199 igE-binding protein-like X 126092011 126092648 - 116888199 MODEL JAAIVD010000014 pseudo 625930902 LOC116913042 U6 spliceosomal RNA 11 33964503 33964609 + 116913042 MODEL JAAIVD010000006;XR_004389578 snrna 625930905 Ndufa1 NADH:ubiquinone oxidoreductase subunit A1 PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 12 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) X 103357029 103359089 - 116888600 MODEL JAAIVD010000014;XM_032889896 XP_032745787 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1 protein-coding 625930912 LOC116905015 Ig heavy chain V region 102-like 7 62495179 62505515 - 116905015 MODEL JAAIVD010000026 pseudo 625930913 LOC116884843 arfaptin-2-like 15 39900059 39901031 - 116884843 MODEL JAAIVD010000010 pseudo 625930914 Smad1 SMAD family member 1 ENCODES a protein that exhibits co-SMAD binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heteromeric SMAD protein complex (ortholog) 17 20704883 20766033 + 22301074;30032202 116886114 MODEL JAAIVD010000011;XM_032887446;XM_032887448;XM_032887449 XP_032743337;XP_032743339;XP_032743340 mothers against decapentaplegic homolog 1 protein-coding 625930934 LOC116883329 histone deacetylase 1-like 14 55088095 55089408 + 116883329 MODEL JAAIVD010000009 pseudo 625930935 Mrpl41 mitochondrial ribosomal protein L41 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); ribonucleoprotein complex (ortholog) 5 12219022 12219915 + 22301074;30032202 116901329 MODEL JAAIVD010000023;XM_032903145 XP_032759036 39S ribosomal protein L41, mitochondrial protein-coding 625930941 LOC116898206 gamma-crystallin E 4 138940872 138943406 - 30032202 116898206 MODEL JAAIVD010000003;XM_032899564;XM_032899565 XP_032755455;XP_032755456 protein-coding 625930951 LOC116892879 nesprin-1-like 2 197277406 197459908 + 30032202 116892879 MODEL JAAIVD010000001;XM_032894789 XP_032750680 protein-coding 625930987 LOC116885949 uncharacterized LOC116885949 16 40653263 40654244 + 116885949 MODEL JAAIVD010000004;XR_004386050 ncrna 625930991 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 5441374 5441447 + 116884149 MODEL JAAIVD010000009 trna 625930992 Osbpl6 oxysterol binding protein like 6 INVOLVED IN regulation of cholesterol transport (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) 5 53848969 53945533 + 30032202 116901545 MODEL JAAIVD010000023;XM_032903529;XM_032903530 XP_032759420;XP_032759421 oxysterol-binding protein-related protein 6 protein-coding 625931027 LOC116885783 40S ribosomal protein S2-like 1 39738357 39739233 + 116885783 MODEL JAAIVD010000025 pseudo 625931028 LOC116887431 patr class II histocompatibility antigen, DO beta chain-like 18 8053528 8058460 - 22301074;30032202 116887431 MODEL JAAIVD010000013;XM_032889046 XP_032744937 protein-coding 625931035 Cxcr2 C-X-C motif chemokine receptor 2 ENCODES a protein that exhibits C-X-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway (ortholog); cellular defense response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute pyelonephritis (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); mast cell granule (ortholog); membrane (ortholog) 4 147603054 147609383 + 22301074;30032202 116898222 MODEL JAAIVD010000003;XM_032899577 XP_032755468 C-X-C chemokine receptor type 2 protein-coding 625931041 LOC116890365 U6 spliceosomal RNA 1 59811518 59811629 - 116890365 MODEL JAAIVD010000025;XR_004386583 snrna 625931044 Timmdc1 translocase of inner mitochondrial membrane domain containing 1 ASSOCIATED WITH Leigh disease (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); nuclear type mitochondrial complex I deficiency 31 (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 4 23449205 23474285 - 30032202 116898846 MODEL JAAIVD010000003;XM_032900201 XP_032756092 complex I assembly factor TIMMDC1, mitochondrial protein-coding 625931055 LOC116904328 peroxiredoxin-6-like 6 64447187 64454510 + 116904328 MODEL JAAIVD010000024 pseudo 625931056 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 84628158 84628230 - 116906527 MODEL JAAIVD010000026 trna 625931057 Kcnk6 potassium two pore domain channel subfamily K member 6 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); regulation of lysosome size (ortholog); ASSOCIATED WITH brain infarction (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog) 2 166713351 166722198 + 22301074;30032202 116892357 MODEL JAAIVD010000001;XM_032894013 XP_032749904 potassium channel subfamily K member 6 protein-coding 625931064 LOC116890093 60S ribosomal protein L13-like 1 230499937 230500561 + 116890093 MODEL JAAIVD010000025 pseudo 625931065 LOC116904819 U6 spliceosomal RNA 6 22020008 22020114 - 116904819 MODEL JAAIVD010000024;XR_004388470 snrna 625931068 LOC116903794 HCLS1-associated protein X-1-like 6 17905606 17906864 - 116903794 MODEL JAAIVD010000024 pseudo 625931069 LOC116906946 zinc finger protein 709-like 1 157826140 157845713 - 30032202 116906946 MODEL JAAIVD010000025;XM_032909871 XP_032765762 protein-coding 625931077 Dnai3 dynein axonemal intermediate chain 3 ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); INVOLVED IN negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of cell migration (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Encephalocele (ortholog); FOUND IN axonemal dynein complex (ortholog); cytoplasm (ortholog) 3 14800144 14858898 + 30032202 116896174 MODEL JAAIVD010000012;XM_032897212 XP_032753103 Wdr63 WD repeat domain 63;WD repeat-containing protein 63 protein-coding 625931104 Megf6 multiple EGF like domains 6 1 6449633 6468563 - 22301074 116890000 MODEL JAAIVD010000025;XM_032890787 XP_032746678 multiple epidermal growth factor-like domains protein 6 protein-coding 625931135 LOC116885531 2'-5'-oligoadenylate synthase-like protein 2 16 38914255 38926193 - 22301074;30032202 116885531 MODEL JAAIVD010000004;XM_032886829 XP_032742720 protein-coding 625931145 LOC116914200 small nucleolar RNA SNORA70 12 90004592 90004719 - 116914200 MODEL JAAIVD010000007 pseudo 625931146 LOC116905371 uncharacterized LOC116905371 7 114696582 114699902 - 116905371 MODEL JAAIVD010000026;XR_004388518 ncrna 625931150 Pfkm phosphofructokinase, muscle ENCODES a protein that exhibits 6-phosphofructokinase activity (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; glycogen storage disease type VII pathway; glycolysis pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN 6-phosphofructokinase complex (ortholog); apical plasma membrane (ortholog); cytosol (ortholog) 1 270920090 270943768 + 22301074;30032202 116884663 MODEL JAAIVD010000025;XM_032885836 XP_032741727 ATP-dependent 6-phosphofructokinase, muscle type protein-coding 625931177 Cks1b CDC28 protein kinase regulatory subunit 1B INVOLVED IN fibroblast proliferation (ortholog); mitotic cell cycle phase transition (ortholog); regulation of DNA-templated transcription (ortholog) 3 64247682 64251411 + 30032202 116896641 MODEL JAAIVD010000012;XM_032897961 XP_032753852 cyclin-dependent kinases regulatory subunit 1 protein-coding 625931184 LOC116890006 olfactory receptor 6C4-like 1 183902805 183903743 - 22301074;30032202 116890006 MODEL JAAIVD010000025;XM_032890791 XP_032746682 protein-coding 625931187 Lmnb2 lamin B2 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of cytoskeleton (ortholog); ASSOCIATED WITH autosomal dominant primary microcephaly 27 (ortholog); Myoclonic Epilepsies (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) 1 153965498 153983162 + 116904711 MODEL JAAIVD010000025;XM_032907441;XM_032907442 XP_032763332;XP_032763333 lamin-B2 protein-coding 625931206 Spidr scaffold protein involved in DNA repair INVOLVED IN cellular response to camptothecin (ortholog); cellular response to hydroxyurea (ortholog); cellular response to ionizing radiation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); ovarian dysgenesis 9 (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN nuclear chromosome (ortholog); nucleoplasm (ortholog) 4 1226067 1448030 + 30032202 116898609 MODEL JAAIVD010000003;XM_032899807 XP_032755698 DNA repair-scaffolding protein protein-coding 625931230 Rhno1 RAD9-HUS1-RAD1 interacting nuclear orphan 1 6 19337463 19343212 + 22301074;30032202 116903215 MODEL JAAIVD010000024;XM_032905591;XM_032905592;XM_032905593 XP_032761482;XP_032761483;XP_032761484 RAD9, HUS1, RAD1-interacting nuclear orphan protein 1 protein-coding 625931243 LOC116899365 serine/arginine-rich splicing factor 7-like 4 122413845 122416393 + 116899365 MODEL JAAIVD010000003;XR_004387720 pseudo 625931246 Rnasek ribonuclease K ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN endosomal lumen acidification (ortholog); proton transmembrane transport (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN membrane (ortholog) 9 49840595 49842337 - 30032202 116909464 MODEL JAAIVD010000002;XM_032913054 XP_032768945 ribonuclease kappa protein-coding 625931253 LOC116894018 putative olfactory receptor 52P1 2 101898195 101899142 + 22301074 116894018 MODEL JAAIVD010000001;XM_032895733 XP_032751624 protein-coding 625931256 Med27 mediator complex subunit 27 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of transcription by RNA polymerase II (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH SPASTICITY, CATARACTS, AND CEREBELLAR HYPOPLASIA (ortholog); FOUND IN core mediator complex (ortholog); cytosol (ortholog); mediator complex (ortholog) 5 7201861 7374320 - 22301074;30032202 116901218 MODEL JAAIVD010000023;XM_032902936 XP_032758827 mediator of RNA polymerase II transcription subunit 27 protein-coding 625931268 LOC116894764 transmembrane protein 127-like 2 195230004 195230784 - 116894764 MODEL JAAIVD010000001 pseudo 625931269 LOC116893776 tear acid lipase-like protein 2 33432444 33442882 - 30032202 116893776 MODEL JAAIVD010000001;XM_032895475 XP_032751366 protein-coding 625931280 LOC116898942 Down syndrome cell adhesion molecule homolog 4 47418583 47956376 + 30032202 116898942 MODEL JAAIVD010000003;XM_032900358;XM_032900359 XP_032756249;XP_032756250 protein-coding 625931302 LOC116907773 olfactory receptor 151-like 8 33888367 33889296 - 22301074;30032202 116907773 MODEL JAAIVD010000027;XM_032910914 XP_032766805 protein-coding 625931305 Carm1 coactivator associated arginine methyltransferase 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone H3R17 methyltransferase activity (ortholog); histone H3R2 methyltransferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); endochondral bone morphogenesis (ortholog); estrogen receptor signaling pathway (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); estrogen-receptor positive breast cancer (ortholog); hepatocellular adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear replication fork (ortholog) 8 17816644 17859717 + 22301074;30032202 116908134 MODEL JAAIVD010000027;XM_032911424;XM_032911426;XM_032911427 XP_032767315;XP_032767317;XP_032767318 histone-arginine methyltransferase CARM1 protein-coding 625931328 Aco2 aconitase 2 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); isocitrate metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); adult respiratory distress syndrome (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 251610086 251651782 + 22301074;30032202 116914088 MODEL JAAIVD010000025;XM_032918399 XP_032774290 aconitate hydratase, mitochondrial protein-coding 625931350 LOC116887498 uncharacterized LOC116887498 18 9228012 9265359 + 116887498 MODEL JAAIVD010000013;XR_004386224 ncrna 625931354 LOC116903756 26S proteasome non-ATPase regulatory subunit 12-like 1 141008663 141110602 - 116903756 MODEL JAAIVD010000025 pseudo 625931355 LOC116915006 ESF1 homolog 13 32639648 32641197 + 116915006 MODEL JAAIVD010000008 pseudo 625931356 LOC116889621 aspartate aminotransferase, mitochondrial-like 1 142324133 142325436 - 116889621 MODEL JAAIVD010000025;XR_004386505 pseudo 625931359 LOC116886447 dnaJ homolog subfamily C member 2-like 17 16779804 16781084 - 30032202 116886447 MODEL JAAIVD010000011;XM_032887947 XP_032743838 protein-coding 625931364 LOC116890441 small nucleolar RNA SNORA70 1 272060539 272060670 - 116890441 MODEL JAAIVD010000025;XR_004386637 snorna 625931367 LOC116893229 RING finger and CHY zinc finger domain-containing protein 1-like 2 116484710 116486659 + 116893229 MODEL JAAIVD010000001 pseudo 625931368 LOC116893057 tear acid lipase-like protein 2 33521749 33551534 - 30032202 116893057 MODEL JAAIVD010000001;XM_032895018 XP_032750909 protein-coding 625931379 LOC116896818 vomeronasal type-2 receptor 1-like 3 91026816 91057823 + 22301074;30032202 116896818 MODEL JAAIVD010000012;XM_032898293 XP_032754184 protein-coding 625931387 LOC116886717 5S ribosomal RNA 17 43146780 43146898 - 116886717 MODEL JAAIVD010000011;XR_004386129 rrna 625931390 LOC116905058 uncharacterized LOC116905058 7 68479667 68482767 + 116905058 MODEL JAAIVD010000026;XR_004388481 ncrna 625931394 LOC116892712 zinc finger protein 773-like 2 179038562 179044682 + 22301074 116892712 MODEL JAAIVD010000001;XM_032894578 XP_032750469 protein-coding 625931402 Ccser2 coiled-coil serine rich protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); FOUND IN microtubule cytoskeleton (ortholog) 13 15333141 15440867 - 30032202 116914793 MODEL JAAIVD010000008;XM_032919239;XM_032919240 XP_032775130;XP_032775131 serine-rich coiled-coil domain-containing protein 2 protein-coding 625931422 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41794351 41794436 + 116884219 MODEL JAAIVD010000009 trna 625931423 Pi4k2b phosphatidylinositol 4-kinase type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); INVOLVED IN phosphatidylinositol phosphate biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog) 11 53379885 53408473 - 30032202 116912246 MODEL JAAIVD010000006;XM_032916228 XP_032772119 phosphatidylinositol 4-kinase type 2-beta protein-coding 625931437 LOC116896097 ras GTPase-activating-like protein IQGAP2 3 222523558 222566084 + 30032202 116896097 MODEL JAAIVD010000012;XM_032897069 XP_032752960 protein-coding 625931448 LOC116908714 uncharacterized LOC116908714 9 64945892 64947690 - 116908714 MODEL JAAIVD010000002;XR_004389014 ncrna 625931452 Rorb RAR related orphan receptor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH endometriosis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 18977850 19149422 - 22301074;30032202 116891020 MODEL JAAIVD010000001;XM_032891700;XM_032891701 XP_032747591;XP_032747592 nuclear receptor ROR-beta protein-coding 625931469 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 37619155 37619230 - 116895141 MODEL JAAIVD010000001 trna 625931470 Plat plasminogen activator, tissue type ENCODES a protein that exhibits phosphoprotein binding (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to luteinizing hormone stimulus (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute promyelocytic leukemia (ortholog); Acute Traumatic Coagulopathy (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 63641452 63665486 - 22301074;30032202 116914579 MODEL JAAIVD010000008;XM_032918938 XP_032774829 tissue-type plasminogen activator protein-coding 625931488 LOC116885497 disintegrin and metalloproteinase domain-containing protein 1 16 32286491 32289560 + 22301074;30032202 116885497 MODEL JAAIVD010000004;XM_032886789 XP_032742680 protein-coding 625931493 LOC116903298 vomeronasal type-2 receptor 26-like 6 23809709 23828620 - 22301074;30032202 116903298 MODEL JAAIVD010000024;XM_032905721 XP_032761612 protein-coding 625931501 Mmp12 matrix metallopeptidase 12 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN bronchiole development (ortholog); cellular response to virus (ortholog); elastin catabolic process (ortholog); ASSOCIATED WITH Alport syndrome (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleus (ortholog) 8 3638233 3646822 + 22301074;30032202 116906975 MODEL JAAIVD010000027;XM_032909895 XP_032765786 macrophage metalloelastase protein-coding 625931513 LOC116902508 small nucleolar RNA SNORD36 5 9741660 9741727 - 116902508 MODEL JAAIVD010000023;XR_004388118 snorna 625931516 LOC116888526 60 kDa heat shock protein, mitochondrial-like X 55386273 55388109 + 116888526 MODEL JAAIVD010000014 pseudo 625931517 LOC116887566 frataxin, mitochondrial-like 18 42101392 42104234 + 116887566 MODEL JAAIVD010000013 pseudo 625931518 Engase endo-beta-N-acetylglucosaminidase ENCODES a protein that exhibits mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity (ortholog) 9 65573366 65587278 - 22301074;30032202 116909474 MODEL JAAIVD010000002;XM_032913064;XM_032913065;XM_032913066;XM_032913067;XM_032913068 XP_032768955;XP_032768956;XP_032768957;XP_032768958;XP_032768959 cytosolic endo-beta-N-acetylglucosaminidase protein-coding 625931552 Pclaf PCNA clamp associated factor ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN centrosome cycle (ortholog); DNA damage response (ortholog); DNA replication (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 8 60211429 60224491 + 30032202 116906645 MODEL JAAIVD010000027;XM_032909422 XP_032765313 PCNA-associated factor protein-coding 625931560 Zscan29 zinc finger and SCAN domain containing 29 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 5 99320064 99324058 - 116901858 MODEL JAAIVD010000023;XM_032904055 XP_032759946 zinc finger and SCAN domain-containing protein 29 protein-coding 625931566 LOC116911600 E3 ubiquitin-protein ligase RNF138-like 10 22587140 22620282 - 116911600 MODEL JAAIVD010000005 pseudo 625931567 LOC116895076 small nucleolar RNA SNORA12 2 43646366 43646511 - 116895076 MODEL JAAIVD010000001;XR_004387245 snorna 625931570 Rgs3 regulator of G protein signaling 3 PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH bladder disease (ortholog); Experimental Liver Cirrhosis (ortholog); lesion of sciatic nerve (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 1 90824171 90946971 - 22301074;30032202 116901325 MODEL JAAIVD010000025;XM_032903143;XM_032903152;XM_032903161;XM_032903169;XM_032903178;XM_032903188;XM_032903197 XP_032759034;XP_032759043;XP_032759052;XP_032759060;XP_032759069;XP_032759079;XP_032759088 regulator of G-protein signaling 3 protein-coding 625931617 Anxa7 annexin A7 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN autophagy (ortholog); epithelial cell differentiation (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH breast cancer (ortholog); colon adenocarcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN chromaffin granule membrane (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 12 90260984 90288574 - 22301074;30032202 116913383 MODEL JAAIVD010000007;XM_032917559;XM_032917560;XM_032917561;XM_032917562 XP_032773450;XP_032773451;XP_032773452;XP_032773453 protein-coding 625931645 Med24 mediator complex subunit 24 ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); nuclear thyroid hormone receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 9 55706326 55731651 + 22301074;30032202 116909739 MODEL JAAIVD010000002;XM_032913417 XP_032769308 mediator of RNA polymerase II transcription subunit 24 protein-coding 625931676 LOC116894100 olfactory receptor 688-like 2 103462467 103463434 + 116894100 MODEL JAAIVD010000001 pseudo 625931677 Mtif2 mitochondrial translational initiation factor 2 ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 11 97145951 97164764 + 22301074 116912164 MODEL JAAIVD010000006;XM_032916084 XP_032771975 translation initiation factor IF-2, mitochondrial protein-coding 625931695 Cbx1 chromobox 1 ENCODES a protein that exhibits enzyme binding (ortholog); histone methyltransferase binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromocenter (ortholog); chromosome, centromeric region (ortholog) 9 57578583 57598864 - 22301074;30032202 116909253 MODEL JAAIVD010000002;XM_032912776;XM_032912777 XP_032768667;XP_032768668 chromobox protein homolog 1 protein-coding 625931706 Ctcf CCCTC-binding factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin insulator sequence binding (ortholog); chromatin loop anchoring activity (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin looping (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 21 (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed chromosome (ortholog); dense fibrillar component (ortholog) 17 25368857 25417192 + 30032202 116886444 MODEL JAAIVD010000011;XM_032887938;XM_032887939;XM_032887940;XM_032887941 XP_032743829;XP_032743830;XP_032743831;XP_032743832 transcriptional repressor CTCF protein-coding 625931729 LOC116884540 cyclin-dependent kinase 1-like 15 3081195 3082058 - 116884540 MODEL JAAIVD010000010 pseudo 625931730 LOC116897423 U6 spliceosomal RNA 3 64579966 64580072 + 116897423 MODEL JAAIVD010000012;XR_004387465 snrna 625931733 Pcyox1l prenylcysteine oxidase 1 like INVOLVED IN neutrophil-mediated killing of bacterium (ortholog) 15 70248535 70259287 + 22301074;30032202 116884684 MODEL JAAIVD010000010;XM_032885864 XP_032741755 prenylcysteine oxidase-like protein-coding 625931743 C1H1orf232 chromosome 1 C1orf232 homolog 1 23993985 23997153 - 116886751 MODEL JAAIVD010000025;XM_032888230 XP_032744121 uncharacterized protein C1orf232 homolog protein-coding 625931750 Lmnb1 lamin B1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); phospholipase binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); cellular response to corticosterone stimulus (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH adult onset demyelinating leukodystrophy (ortholog); Animal Disease Models (ortholog); autosomal dominant primary microcephaly 26 (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 15 75083432 75125925 - 116884531 MODEL JAAIVD010000010;XM_032885666 XP_032741557 lamin-B1 protein-coding 625931765 LOC116900081 protein crumbs homolog 1-like 5 17334944 17378530 - 116900081 MODEL JAAIVD010000023 pseudo 625931766 LOC116895388 cofilin-1-like 3 57279625 57280233 - 116895388 MODEL JAAIVD010000012 pseudo 625931767 Ndst1 N-deacetylase and N-sulfotransferase 1 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta development (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 46 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) 15 71234350 71258398 + 22301074;30032202 116884410 MODEL JAAIVD010000010;XM_032885509 XP_032741400 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 1 protein-coding 625931784 Kank3 KN motif and ankyrin repeat domains 3 ASSOCIATED WITH COVID-19 (ortholog) 1 158593247 158600388 - 22301074;30032202 116907004 MODEL JAAIVD010000025;XM_032909940;XR_004388795 XP_032765831 KN motif and ankyrin repeat domain-containing protein 3 protein-coding 625931802 Cmas cytidine monophosphate N-acetylneuraminic acid synthetase ENCODES a protein that exhibits N-acylneuraminate cytidylyltransferase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); glycosylation (ortholog); N-acetylneuraminate metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); FOUND IN nucleoplasm (ortholog) 6 523597 542285 + 30032202 116903070 MODEL JAAIVD010000024;XM_032905369 XP_032761260 N-acylneuraminate cytidylyltransferase protein-coding 625931814 LOC116908123 uncharacterized LOC116908123 8 99260570 99264247 + 116908123 MODEL JAAIVD010000027;XM_032911413 XP_032767304 uncharacterized protein LOC116908123 protein-coding 625931818 LOC116906935 zinc finger protein 709-like 1 157786317 157801306 + 30032202 116906935 MODEL JAAIVD010000025;XM_032909862 XP_032765753 protein-coding 625931826 LOC116902155 high mobility group protein B1-like 5 133656406 133657140 + 116902155 MODEL JAAIVD010000023 pseudo 625931827 Mlh1 mutL homolog 1 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH bile duct cancer (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN chiasma (ortholog); chromosome (ortholog); condensed chromosome (ortholog) 8 101794931 101834789 - 22301074;30032202 116907702 MODEL JAAIVD010000027;XM_032910825 XP_032766716 DNA mismatch repair protein Mlh1 protein-coding 625931850 LOC116889065 solute carrier family 25 member 39-like X 23679018 23679908 - 116889065 MODEL JAAIVD010000014 pseudo 625931851 Crnn cornulin INVOLVED IN cell-cell adhesion (ortholog); cellular response to cytokine stimulus (ortholog); positive regulation of cell cycle G1/S phase transition (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 3 120459854 120462164 + 22301074;30032202 116895536 MODEL JAAIVD010000012;XM_032896781 XP_032752672 protein-coding 625931855 Unc93b1 unc-93B1 regulator of TLR signaling ENCODES a protein that exhibits Toll-like receptor binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Herpes Simplex Encephalitis (ortholog); FOUND IN early phagosome (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 2 3703387 3714253 - 30032202 116890799 MODEL JAAIVD010000001;XM_032891278 XP_032747169 protein unc-93 homolog B1;unc-93 homolog B1, TLR signaling regulator protein-coding 625931869 LOC116908187 thrombospondin type-1 domain-containing protein 4-like 8 54692138 54818518 - 30032202 116908187 MODEL JAAIVD010000027;XM_032911474 XP_032767365 protein-coding 625931877 Mdga1 MAM domain containing glycosylphosphatidylinositol anchor 1 INVOLVED IN brain development (ortholog); cerebral cortex radially oriented cell migration (ortholog); dopamine metabolic process (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 18 3974914 4034840 + 22301074;30032202 116887015 MODEL JAAIVD010000013;XM_032888503 XP_032744394 MAM domain-containing glycosylphosphatidylinositol anchor protein 1 protein-coding 625931898 LOC116903489 uncharacterized LOC116903489 6 54778868 54779859 + 116903489 MODEL JAAIVD010000024;XR_004388280 ncrna 625931902 LOC116887605 alpha/beta hydrolase domain-containing protein 17C-like 18 9402769 9403968 - 116887605 MODEL JAAIVD010000013 pseudo 625931903 LOC116904572 killer cell lectin-like receptor subfamily B member 1A 6 19070136 19081565 + 116904572 MODEL JAAIVD010000024;XM_032907370;XM_032907371 XP_032763261;XP_032763262 protein-coding 625931914 LOC116886363 40S ribosomal protein S16-like 17 31753778 31754254 + 116886363 MODEL JAAIVD010000011 pseudo 625931915 Wdr37 WD repeat domain 37 INVOLVED IN corpus callosum development (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); coloboma (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 22517600 22572256 - 22301074;30032202 116884039 MODEL JAAIVD010000009;XM_032885283;XM_032885284 XP_032741174;XP_032741175 WD repeat-containing protein 37 protein-coding 625931936 Cmc1 C-X9-C motif containing 1 FOUND IN mitochondrion (ortholog) 8 109330323 109394346 - 30032202 116907887 MODEL JAAIVD010000027;XM_032911076 XP_032766967 COX assembly mitochondrial protein homolog protein-coding 625931944 LOC116907276 forkhead box protein K2-like 8 16245102 16258545 + 116907276 MODEL JAAIVD010000027 pseudo 625931945 Ucp3 uncoupling protein 3 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); oxidative phosphorylation uncoupler activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); fatty acid metabolic process (ortholog); lipid hydroperoxide transport (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); coronary restenosis (ortholog); diabetes mellitus (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 98769576 98782637 + 22301074;30032202 116893966 MODEL JAAIVD010000001;XM_032895685 XP_032751576 mitochondrial uncoupling protein 3 protein-coding 625931956 LOC116900285 40S ribosomal protein S2-like 5 63535972 63536807 + 116900285 MODEL JAAIVD010000023 pseudo 625931957 Cog8 component of oligomeric golgi complex 8 INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIh (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi transport complex (ortholog) 17 26772948 26783929 - 22301074;30032202 116886633 MODEL JAAIVD010000011;XM_032888138 XP_032744029 conserved oligomeric Golgi complex subunit 8 protein-coding 625931966 LOC116906621 40S ribosomal protein S2-like 8 10214736 10225117 - 116906621 MODEL JAAIVD010000027 pseudo 625931967 LOC116895022 U1 spliceosomal RNA 2 30092791 30092952 + 116895022 MODEL JAAIVD010000001;XR_004387208 snrna 625931970 Vash1 vasohibin 1 ENCODES a protein that exhibits actin binding (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); labyrinthine layer blood vessel development (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH liver cirrhosis (ortholog); portal hypertension (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 7 100767763 100781077 + 22301074;30032202 116905307 MODEL JAAIVD010000026;XM_032908191 XP_032764082 tubulinyl-Tyr carboxypeptidase 1 protein-coding 625931981 Tecrl trans-2,3-enoyl-CoA reductase like ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 3 (ortholog); long QT syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 39776772 39840986 - 22301074;30032202 116912513 MODEL JAAIVD010000006;XM_032916600 XP_032772491 trans-2,3-enoyl-CoA reductase-like protein-coding 625931997 LOC116910292 alpha-enolase-like 9 46256670 46260375 - 116910292 MODEL JAAIVD010000002 pseudo 625931998 LOC116894054 olfactory receptor 51F2-like 2 102735917 102736867 + 22301074 116894054 MODEL JAAIVD010000001;XM_032895776 XP_032751667 protein-coding 625932001 LOC116889285 rhox homeobox family member 2-like X 103751141 103753244 + 22301074 116889285 MODEL JAAIVD010000014;XM_032890420 XP_032746311 protein-coding 625932009 LOC116887441 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8664294 8667809 + 30032202 116887441 MODEL JAAIVD010000013;XM_032889055 XP_032744946 protein-coding 625932020 LOC116907270 inosine-5'-monophosphate dehydrogenase 2-like 8 15511226 15512223 + 116907270 MODEL JAAIVD010000027 pseudo 625932021 Il3ra interleukin 3 receptor subunit alpha ENCODES a protein that exhibits interleukin-3 binding (ortholog); interleukin-3 receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-3-mediated signaling pathway (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN interleukin-3 signaling pathway; FOUND IN membrane (ortholog) 16 14905199 14910664 - 22301074 116885897 MODEL JAAIVD010000004;XM_032887216 XP_032743107 interleukin-3 receptor subunit alpha protein-coding 625932037 Nup93 nucleoporin 93 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN nuclear envelope organization (ortholog); nuclear pore complex assembly (ortholog); positive regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); nephrotic syndrome (ortholog); FOUND IN centrosome (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 17 1119436 1222497 + 22301074;30032202 116886594 MODEL JAAIVD010000011;XM_032888116 XP_032744007 nuclear pore complex protein Nup93 protein-coding 625932063 Selenoh selenoprotein H ASSOCIATED WITH colorectal adenoma (ortholog); colorectal carcinoma (ortholog) 5 62050426 62051966 - 30032202 116901582 MODEL JAAIVD010000023;XM_032903595;XM_032903596 XP_032759486;XP_032759487 protein-coding 625932073 LOC116890805 histone-lysine N-methyltransferase KMT5B 2 3872295 3909047 - 22301074;30032202 116890805 MODEL JAAIVD010000001;XM_032891289 XP_032747180 protein-coding 625932086 LOC116894538 leukocyte immunoglobulin-like receptor subfamily B member 4 2 176514752 176520081 - 30032202 116894538 MODEL JAAIVD010000001;XM_032896241;XM_032896242;XM_032896243 XP_032752132;XP_032752133;XP_032752134 protein-coding 625932103 C10H2orf76 chromosome 10 C2orf76 homolog 10 12696984 12766958 + 116911227 MODEL JAAIVD010000005;XM_032915125;XM_032915126;XM_032915127;XM_032915128 XP_032771016;XP_032771017;XP_032771018;XP_032771019 UPF0538 protein C2orf76 homolog protein-coding 625932126 Man2b1 mannosidase alpha class 2B member 1 ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); D-mannose binding (ortholog); INVOLVED IN learning or memory (ortholog); mannose metabolic process (ortholog); ASSOCIATED WITH alpha-mannosidosis (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); nucleoplasm (ortholog) 17 15189264 15208905 - 22301074;30032202 116886238 MODEL JAAIVD010000011;XM_032887646;XM_032887647;XM_032887648;XM_032887649 XP_032743537;XP_032743538;XP_032743539;XP_032743540 lysosomal alpha-mannosidase protein-coding 625932161 LOC116906102 poly(rC)-binding protein 2-like 7 75030075 75031030 + 116906102 MODEL JAAIVD010000026 pseudo 625932162 Dnajb7 DnaJ heat shock protein family (Hsp40) member B7 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog) 1 251159546 251160835 - 30032202 116913961 MODEL JAAIVD010000025;XM_032918233 XP_032774124 dnaJ homolog subfamily B member 7 protein-coding 625932167 Pdia3 protein disulfide isomerase family A member 3 ENCODES a protein that exhibits identical protein binding (ortholog); lncRNA binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to nonylphenol (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asphyxia neonatorum (ortholog); autoimmune hepatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 5 99567550 99592299 + 22301074;30032202 116901863 MODEL JAAIVD010000023;XM_032904061 XP_032759952 protein disulfide-isomerase A3 protein-coding 625932184 LOC116885063 small nucleolar RNA SNORA17 15 73206486 73206607 + 116885063 MODEL JAAIVD010000010 pseudo 625932185 LOC116910939 histone-lysine N-methyltransferase SMYD3-like 10 75177601 75179894 - 116910939 MODEL JAAIVD010000005 pseudo 625932186 LOC116884904 importin subunit alpha-1-like 15 4140569 4145064 + 116884904 MODEL JAAIVD010000010 pseudo 625932187 LOC116889546 U6atac minor spliceosomal RNA X 81715021 81715124 + 116889546 MODEL JAAIVD010000014 pseudo 625932188 Tesk1 testis associated actin remodelling kinase 1 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN establishment of vesicle localization (ortholog); negative regulation of cilium assembly (ortholog); nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 1 3050260 3056241 - 22301074;30032202 116891087 MODEL JAAIVD010000025;XM_032891805 XP_032747696 dual specificity testis-specific protein kinase 1 protein-coding 625932202 Prkcsh PRKCSH beta subunit of glucosidase II ENCODES a protein that exhibits calcium ion binding (ortholog); phosphoprotein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); N-glycan processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatitis B (ortholog); liver disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog) 8 18253309 18264767 + 22301074;30032202 116908072 MODEL JAAIVD010000027;XM_032911345;XM_032911346 XP_032767236;XP_032767237 glucosidase 2 subunit beta;protein kinase C substrate 80K-H protein-coding 625932226 Tjp3 tight junction protein 3 INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 1 153600396 153618800 + 22301074;30032202 116904430 MODEL JAAIVD010000025;XM_032907264;XM_032907268 XP_032763155;XP_032763159 tight junction protein ZO-3 protein-coding 625932254 LOC116886191 60S ribosomal protein L27-like 17 24926469 24927165 - 116886191 MODEL JAAIVD010000011 pseudo 625932255 Zfp64 ZFP64 zinc finger protein INVOLVED IN mesenchymal cell differentiation (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); megasporocyte nucleus (ortholog); nucleus (ortholog) 5 148985102 149044425 + 116902296 MODEL JAAIVD010000023;XM_032904733 XP_032760624 zinc finger protein 64 protein-coding 625932268 LOC116891299 zinc finger protein 844-like 2 55039759 55048344 + 116891299 MODEL JAAIVD010000001 pseudo 625932269 Tmem185b transmembrane protein 185B 10 12111326 12113414 + 116911367 MODEL JAAIVD010000005;XM_032915296 XP_032771187 protein-coding 625932274 Bcl2l13 BCL2 like 13 INVOLVED IN apoptotic process (ortholog); canonical glycolysis (ortholog); fat cell differentiation (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 6 25859713 25903232 - 22301074;30032202 116903324 MODEL JAAIVD010000024;XM_032905761;XM_032905763;XM_032905764;XM_032905765 XP_032761652;XP_032761654;XP_032761655;XP_032761656 bcl-2-like protein 13 protein-coding 625932293 Lingo4 leucine rich repeat and Ig domain containing 4 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH polymicrogyria (ortholog) 3 62772733 62776950 - 22301074;30032202 116895414 MODEL JAAIVD010000012;XM_032896696 XP_032752587 leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 4 protein-coding 625932298 Heg1 heart development protein with EGF like domains 1 INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); cell-cell junction organization (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) 4 18476572 18557619 + 22301074;30032202 116898795 MODEL JAAIVD010000003;XM_032900146 XP_032756037 protein HEG homolog 1 protein-coding 625932317 LOC116886211 60S ribosomal protein L36-like 1 13623762 13624240 - 22301074;30032202 116886211 MODEL JAAIVD010000025;XM_032887604 XP_032743495 protein-coding 625932321 LOC116893081 CWF19-like protein 2 2 50815150 50822368 - 116893081 MODEL JAAIVD010000001 pseudo 625932322 Galk2 galactokinase 2 ENCODES a protein that exhibits galactokinase activity (ortholog) 5 104187980 104304452 + 22301074;30032202 116901910 MODEL JAAIVD010000023;XM_032904123;XM_032904124;XM_032904125 XP_032760014;XP_032760015;XP_032760016 N-acetylgalactosamine kinase protein-coding 625932342 LOC116897820 adenosylhomocysteinase-like 4 8176866 8178156 - 116897820 MODEL JAAIVD010000003 pseudo 625932343 Notum notum, palmitoleoyl-protein carboxylesterase ENCODES a protein that exhibits lipase activity (ortholog); palmitoleyl hydrolase activity (ortholog); protein-containing complex destabilizing activity (ortholog); INVOLVED IN bone development (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) 9 63362387 63368920 + 22301074;30032202 116910121 MODEL JAAIVD010000002;XM_032913955 XP_032769846 palmitoleoyl-protein carboxylesterase NOTUM protein-coding 625932358 Kif21a kinesin family member 21A ENCODES a protein that exhibits ankyrin repeat binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cortical microtubule organization (ortholog); regulation of axon guidance (ortholog); ASSOCIATED WITH aniridia (ortholog); congenital fibrosis of the extraocular muscles (ortholog); congenital fibrosis of the extraocular muscles 1 (ortholog); FOUND IN axonal growth cone (ortholog); cytosol (ortholog); presynapse (ortholog) 1 263931106 264046797 - 22301074;30032202 116884140 MODEL JAAIVD010000025;XM_032885321 XP_032741212 kinesin-like protein KIF21A protein-coding 625932400 Ier3ip1 immediate early response 3 interacting protein 1 INVOLVED IN brain development (ortholog); cell maturation (ortholog); chromatin organization (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 15 55123813 55133967 - 30032202 116884469 MODEL JAAIVD010000010;XM_032885579 XP_032741470 immediate early response 3-interacting protein 1 protein-coding 625932407 LOC116915139 small nucleolar RNA SNORA17 13 61770754 61770878 - 116915139 MODEL JAAIVD010000008 pseudo 625932408 LOC116895102 28S ribosomal RNA 2 155452233 155456756 + 116895102 MODEL JAAIVD010000001 pseudo 625932409 LOC116909039 40S ribosomal protein S3a-like 9 7849493 7850094 + 22301074;30032202 116909039 MODEL JAAIVD010000002;XM_032912520 XP_032768411 protein-coding 625932413 LOC116901046 uncharacterized LOC116901046 5 133318544 133330245 + 22301074 116901046 MODEL JAAIVD010000023;XM_032902628 XP_032758519 uncharacterized protein LOC116901046 protein-coding 625932425 Lbh LBH regulator of WNT signaling pathway INVOLVED IN mammary gland development (ortholog); mammary gland epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 7 20290064 20313990 - 30032202 116905948 MODEL JAAIVD010000026;XM_032908945 XP_032764836 protein LBH protein-coding 625932432 LOC116897866 stefin-3-like 4 21131414 21139007 + 116897866 MODEL JAAIVD010000003 pseudo 625932433 LOC116884741 trafficking protein particle complex subunit 8-like 15 22185345 22198174 - 30032202 116884741 MODEL JAAIVD010000010;XM_032885959 XP_032741850 protein-coding 625932439 Numbl NUMB like endocytic adaptor protein INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); cytokine-mediated signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog) 2 168662317 168686998 - 116892436 MODEL JAAIVD010000001;XM_032894125 XP_032750016 numb-like protein protein-coding 625932453 LOC116908118 60S ribosomal protein L7-like 8 59060346 59061640 + 116908118 MODEL JAAIVD010000027 pseudo 625932454 Mxi1 MAX interactor 1, dimerization protein ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH breast adenocarcinoma (ortholog); esophageal cancer (ortholog); kidney disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 52760845 52801616 + 22301074;30032202 116891283 MODEL JAAIVD010000001;XM_032892187 XP_032748078 max-interacting protein 1 protein-coding 625932464 Art4 ADP-ribosyltransferase 4 (inactive) (Dombrock blood group) 6 12579005 12589561 + 22301074;30032202 116904534 MODEL JAAIVD010000024;XM_032907326 XP_032763217 ADP-ribosyltransferase 4 (Dombrock blood group);ecto-ADP-ribosyltransferase 4 protein-coding 625932471 Dennd4c DENN domain containing 4C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); insulin-responsive compartment (ortholog) 1 67167909 67261295 - 22301074;30032202 116900482 MODEL JAAIVD010000025;XM_032902220 XP_032758111 DENN domain-containing protein 4C protein-coding 625932508 LOC116885915 charged multivesicular body protein 5-like 16 19488799 19489795 - 116885915 MODEL JAAIVD010000004 pseudo 625932509 LOC116902578 small nucleolar RNA SNORA17 5 138490697 138490828 + 116902578 MODEL JAAIVD010000023;XR_004388171 snorna 625932512 Cby2 chibby family member 2 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 12 48796209 48811642 + 116913558 MODEL JAAIVD010000007;XM_032917766 XP_032773657 spermatid-associated protein protein-coding 625932519 Fam20c FAM20C golgi associated secretory pathway kinase ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); protease binding (ortholog); INVOLVED IN biomineral tissue development (ortholog); dentinogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 16 14388818 14446072 - 30032202 116885431 MODEL JAAIVD010000004;XM_032886717 XP_032742608 extracellular serine/threonine protein kinase FAM20C protein-coding 625932533 Mc5r melanocortin 5 receptor ENCODES a protein that exhibits hormone binding (ortholog); melanocortin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); FOUND IN plasma membrane (ortholog) 15 62932277 62937029 - 22301074;30032202 116884763 MODEL JAAIVD010000010;XM_032885979 XP_032741870 melanocortin receptor 5 protein-coding 625932540 Selenov selenoprotein V 2 167726322 167733054 + 30032202 116894472 MODEL JAAIVD010000001;XM_032896184;XR_004387027 XP_032752075 protein-coding 625932551 Larp7 La ribonucleoprotein 7, transcriptional regulator ENCODES a protein that exhibits 7SK snRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN box C/D sno(s)RNA 3'-end processing (ortholog); germ cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Alazami Syndrome (ortholog); Alazami-Yuan Syndrome (ortholog); generalized epilepsy (ortholog); FOUND IN 7SK snRNP (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 3 31794313 31809706 + 22301074;30032202 116896276 MODEL JAAIVD010000012;XM_032897357 XP_032753248 la-related protein 7 protein-coding 625932568 Sik2 salt inducible kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) 8 45347285 45444070 - 22301074;30032202 116906791 MODEL JAAIVD010000027;XM_032909652;XM_032909654;XM_032909655;XM_032909656 XP_032765543;XP_032765545;XP_032765546;XP_032765547 serine/threonine-protein kinase SIK2 protein-coding 625932597 LOC116909934 uncharacterized LOC116909934 9 49505632 49510539 - 22301074;30032202 116909934 MODEL JAAIVD010000002;XM_032913704;XM_032913705;XM_032913706;XM_032913707;XM_032913708;XR_004389112 XP_032769595;XP_032769596;XP_032769597;XP_032769598;XP_032769599 uncharacterized protein LOC116909934 protein-coding 625932620 LOC116906466 small nucleolar RNA SNORA17 7 80317182 80317320 - 116906466 MODEL JAAIVD010000026 pseudo 625932621 LOC116892382 60S ribosomal protein L32-like 2 167251294 167251797 + 22301074;30032202 116892382 MODEL JAAIVD010000001;XM_032894046 XP_032749937 protein-coding 625932626 Epha3 EPH receptor A3 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH atrial fibrillation (ortholog); Fever (ortholog); pancreatic cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); early endosome (ortholog) 4 78541273 78867160 + 22301074;30032202 116899058 MODEL JAAIVD010000003;XM_032900527;XM_032900528 XP_032756418;XP_032756419 ephrin type-A receptor 3 protein-coding 625932651 LOC116888637 protein max-like X 2674120 2674573 - 116888637 MODEL JAAIVD010000014 pseudo 625932652 LOC116887326 olfactory receptor 1361-like 18 10406694 10407626 + 22301074;30032202 116887326 MODEL JAAIVD010000013;XM_032888919 XP_032744810 protein-coding 625932655 LOC116902923 hyaluronidase PH-20 6 114527936 114538076 - 22301074;30032202 116902923 MODEL JAAIVD010000024;XM_032905247 XP_032761138 protein-coding 625932663 LOC116887353 olfactory receptor 14J1-like 18 10790468 10791433 + 22301074;30032202 116887353 MODEL JAAIVD010000013;XM_032888947 XP_032744838 protein-coding 625932666 LOC116895335 glyceraldehyde-3-phosphate dehydrogenase-like 3 37519528 37520472 - 116895335 MODEL JAAIVD010000012 pseudo 625932667 LOC116910731 small nucleolar RNA SNORA76 9 72621428 72621560 - 116910731 MODEL JAAIVD010000002;XR_004389249 snorna 625932670 LOC116901194 wee1-like protein kinase 2 1 121341521 121342199 + 116901194 MODEL JAAIVD010000025 pseudo 625932671 Gpat3 glycerol-3-phosphate acyltransferase 3 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phospholipid biosynthetic process (ortholog); regulation of TOR signaling (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 11073944 11122859 + 30032202 116912583 MODEL JAAIVD010000006;XM_032916697 XP_032772588 protein-coding 625932687 LOC116886719 small nucleolar RNA SNORD43 17 42887007 42887070 + 116886719 MODEL JAAIVD010000011;XR_004386131 snorna 625932690 LOC116911648 alpha-enolase-like 10 36120420 36130059 - 116911648 MODEL JAAIVD010000005 pseudo 625932691 LOC116888881 eukaryotic translation initiation factor 4B-like X 84395013 84396976 + 116888881 MODEL JAAIVD010000014;XR_004386352 pseudo 625932694 Slc22a14 solute carrier family 22 member 14 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); FOUND IN mitochondrial inner membrane (ortholog); sperm principal piece (ortholog) 8 110411703 110432567 - 22301074 116907630 MODEL JAAIVD010000027;XM_032910690;XM_032910691 XP_032766581;XP_032766582 protein-coding 625932716 LOC116912417 uncharacterized LOC116912417 11 53926746 53946335 - 116912417 MODEL JAAIVD010000006;XR_004389459 ncrna 625932721 LOC116900167 taste receptor type 2 member 134 5 29427434 29428429 + 22301074;30032202 116900167 MODEL JAAIVD010000023;XM_032901928 XP_032757819 protein-coding 625932724 LOC116900150 voltage-dependent anion-selective channel protein 2-like 5 17179506 17180680 - 116900150 MODEL JAAIVD010000023 pseudo 625932725 Lrrc61 leucine rich repeat containing 61 6 92397827 92417412 - 22301074;30032202 116903856 MODEL JAAIVD010000024;XM_032906595 XP_032762486 leucine-rich repeat-containing protein 61 protein-coding 625932731 Mex3a mex-3 RNA binding family member A ENCODES a protein that exhibits RNA binding (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); P-body (ortholog) 3 65026433 65031471 - 22301074;30032202 116896684 MODEL JAAIVD010000012;XM_032898068 XP_032753959 RNA-binding protein MEX3A protein-coding 625932737 LOC116885921 heterogeneous nuclear ribonucleoprotein Q-like 16 24295157 24297601 - 116885921 MODEL JAAIVD010000004;XR_004386048 pseudo 625932741 LOC116906993 olfactory receptor 8B3-like 8 32282160 32283092 + 22301074;30032202 116906993 MODEL JAAIVD010000027;XM_032909920 XP_032765811 protein-coding 625932744 Snurf SNRPN upstream open reading frame ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 2 139950291 139968314 + 30032202 116892030 MODEL JAAIVD010000001;XM_032893488 XP_032749379 SNRPN upstream reading frame;SNRPN upstream reading frame protein protein-coding 625932753 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 8500954 8501025 + 116910823 MODEL JAAIVD010000002 trna 625932754 LOC116889674 ribosome-recycling factor-like 30032202 116889674 MODEL JAAIVD010000048;XM_032890564 XP_032746455 protein-coding 625932755 LOC116897454 U6 spliceosomal RNA 3 64864758 64864867 + 116897454 MODEL JAAIVD010000012;XR_004387485 snrna 625932758 Pdcl3 phosducin like 3 ENCODES a protein that exhibits protein folding chaperone (ortholog); vascular endothelial growth factor receptor 2 binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); cellular response to heat (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 115193918 115203465 + 30032202 116899314 MODEL JAAIVD010000003;XM_032900980;XM_032900981 XP_032756871;XP_032756872 phosducin-like protein 3 protein-coding 625932771 Ggh gamma-glutamyl hydrolase ENCODES a protein that exhibits gamma-glutamyl-peptidase activity (ortholog); INVOLVED IN response to ethanol (ortholog); response to insulin (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN extracellular space (ortholog) 1 122963764 122987103 - 30032202 116903001 MODEL JAAIVD010000025;XM_032905315 XP_032761206 protein-coding 625932784 LOC116894708 60S ribosomal protein L7a-like 2 227136891 227137695 - 116894708 MODEL JAAIVD010000001 pseudo 625932785 LOC116913553 dual specificity protein phosphatase 13 12 91525836 91528465 - 22301074;30032202 116913553 MODEL JAAIVD010000007;XM_032917761 XP_032773652 protein-coding 625932790 Prr9 proline rich 9 3 616674 617989 - 116896112 MODEL JAAIVD010000012;XM_032897076 XP_032752967 proline-rich protein 9 protein-coding 625932796 LOC116900854 olfactory receptor 5M11-like 5 63259953 63262044 + 22301074;30032202 116900854 MODEL JAAIVD010000023;XM_032902542 XP_032758433 protein-coding 625932800 LOC116900863 olfactory receptor 1052-like 5 64234176 64236948 - 116900863 MODEL JAAIVD010000023 pseudo 625932801 Slc4a1 solute carrier family 4 member 1 (Diego blood group) ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); bicarbonate transmembrane transporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); blood coagulation (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH abetalipoproteinemia (ortholog); ACANTHOCYTOSIS (ortholog); Alkalosis (ortholog); FOUND IN ankyrin-1 complex (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 9 61646785 61658882 - 22301074;30032202 116909920 MODEL JAAIVD010000002;XM_032913683 XP_032769574 band 3 anion transport protein protein-coding 625932823 LOC116911848 small nucleolar RNA SNORA40 10 50465612 50465694 + 116911848 MODEL JAAIVD010000005 pseudo 625932824 LOC116893910 40S ribosomal protein S15a-like 2 77195330 77195772 - 116893910 MODEL JAAIVD010000001 pseudo 625932825 Padi6 peptidyl arginine deiminase 6 ENCODES a protein that exhibits identical protein binding (ortholog); protein-arginine deiminase activity (ortholog); structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN cytoplasm organization (ortholog); cytoskeleton organization (ortholog); embryonic cleavage (ortholog); ASSOCIATED WITH genetic disease (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 16 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) 1 17406567 17421097 + 22301074;30032202 116886489 MODEL JAAIVD010000025;XM_032887995 XP_032743886 protein-arginine deiminase type-6 protein-coding 625932844 LOC116895174 COMM domain-containing protein 6-like 3 88975497 88986834 + 116895174 MODEL JAAIVD010000012;XM_032896529 XP_032752420 protein-coding 625932848 LOC116888210 MLV-related proviral Env polyprotein-like X 127977065 127978566 - 116888210 MODEL JAAIVD010000014 pseudo 625932849 Rbm17 RNA binding motif protein 17 INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Spinocerebellar Ataxias (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 14 17618080 17635544 - 22301074;30032202 116883617 MODEL JAAIVD010000009;XM_032884808;XM_032884809 XP_032740699;XP_032740700 splicing factor 45 protein-coding 625932868 LOC116910206 olfactory receptor 2V2-like 9 31592688 31593668 - 22301074 116910206 MODEL JAAIVD010000002;XM_032914071 XP_032769962 protein-coding 625932871 LOC116908751 uncharacterized LOC116908751 9 72788845 72790977 - 116908751 MODEL JAAIVD010000002;XR_004389018 ncrna 625932875 LOC116906516 U4 spliceosomal RNA 7 9954162 9954327 + 116906516 MODEL JAAIVD010000026 pseudo 625932876 Rfx4 regulatory factor X4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); cilium assembly (ortholog); dorsal spinal cord development (ortholog); FOUND IN nucleus (ortholog) 1 163536935 163693793 - 30032202 116907445 MODEL JAAIVD010000025;XM_032910419;XM_032910429 XP_032766310;XP_032766320 transcription factor RFX4 protein-coding 625932901 Lrrc47 leucine rich repeat containing 47 1 6696525 6706360 - 22301074;30032202 116892162 MODEL JAAIVD010000025;XM_032893662 XP_032749553 leucine-rich repeat-containing protein 47 protein-coding 625932912 LOC116913767 uncharacterized LOC116913767 12 13382252 13559261 + 116913767 MODEL JAAIVD010000007;XR_004389639 ncrna 625932918 Nudt1 nudix hydrolase 1 ENCODES a protein that exhibits 2-hydroxy-ATP hydrolase activity (ortholog); 2-hydroxy-dATP hydrolase activity (ortholog); 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); INVOLVED IN DNA protection (ortholog); male gonad development (ortholog); purine nucleoside catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cadmium Poisoning (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 12857143 12863598 - 22301074;30032202 116885679 MODEL JAAIVD010000004;XM_032886986 XP_032742877 7,8-dihydro-8-oxoguanine triphosphatase protein-coding 625932926 LOC116886895 elongation factor 1-alpha 1-like 18 24267238 24268738 + 116886895 MODEL JAAIVD010000013 pseudo 625932927 LOC116907100 olfactory receptor 7G2-like 8 14343939 14344892 + 22301074;30032202 116907100 MODEL JAAIVD010000027;XM_032910068 XP_032765959 protein-coding 625932931 LOC116908923 olfactory receptor 1468 9 31681954 31682898 - 22301074;30032202 116908923 MODEL JAAIVD010000002;XM_032912381 XP_032768272 protein-coding 625932934 LOC116894573 vomeronasal type-2 receptor 116-like 2 178866969 178890133 + 22301074;30032202 116894573 MODEL JAAIVD010000001;XM_032896291;XM_032896292;XM_032896293 XP_032752182;XP_032752183;XP_032752184 protein-coding 625932947 Spp1 secreted phosphoprotein 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); integrin binding (ortholog); small molecule binding (ortholog); INVOLVED IN androgen catabolic process (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; diabetic nephropathy pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Albuminuria (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); cytoplasm (ortholog) 11 14489504 14495504 + 22301074;30032202 116912551 MODEL JAAIVD010000006;XM_032916651 XP_032772542 osteopontin protein-coding 625932958 LOC116890291 tissue-resident T-cell transcription regulator protein ZNF683-like 1 24186385 24188261 - 116890291 MODEL JAAIVD010000025;XM_032891002 XP_032746893 protein-coding 625932964 Ergic1 endoplasmic reticulum-golgi intermediate compartment 1 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Contracture (ortholog); neurogenic-type arthrogryposis multiplex congenita-2 (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); nucleoplasm (ortholog) 9 4796332 4911342 - 30032202 116909184 MODEL JAAIVD010000002;XM_032912675 XP_032768566 endoplasmic reticulum-Golgi intermediate compartment protein 1 protein-coding 625932978 Aldh1a1 aldehyde dehydrogenase 1 family member A1 ENCODES a protein that exhibits 3-chloroallyl aldehyde dehydrogenase activity (ortholog); 3-deoxyglucosone dehydrogenase activity (ortholog); aldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); 9-cis-retinoic acid metabolic process (ortholog); cellular detoxification of aldehyde (ortholog); PARTICIPATES IN cyclophosphamide pharmacodynamics pathway; cyclophosphamide pharmacokinetics pathway; ifosfamide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Creutzfeldt-Jakob disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); synapse (ortholog) 2 20626239 20676233 + 30032202 116891024 MODEL JAAIVD010000001;XM_032891705 XP_032747596 retinal dehydrogenase 1 protein-coding 625932996 LOC116893262 presenilins-associated rhomboid-like protein, mitochondrial 2 138625010 138673328 + 22301074;30032202 116893262 MODEL JAAIVD010000001;XM_032895118 XP_032751009 protein-coding 625933003 LOC116898802 kxDL motif-containing protein 1-like 4 19614601 19615068 - 30032202 116898802 MODEL JAAIVD010000003;XM_032900152 XP_032756043 protein-coding 625933006 LOC116885260 cytochrome c oxidase subunit 7A2, mitochondrial-like 16 30025330 30026126 + 116885260 MODEL JAAIVD010000004 pseudo 625933007 LOC116888587 heat shock cognate 71 kDa protein-like X 77543548 77545472 + 116888587 MODEL JAAIVD010000014 pseudo 625933008 LOC116892739 zinc finger protein 471-like 2 179746181 179760715 - 30032202 116892739 MODEL JAAIVD010000001;XM_032894613 XP_032750504 protein-coding 625933016 Eif2ak4 eukaryotic translation initiation factor 2 alpha kinase 4 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); tRNA binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cold (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH amino acid metabolic disorder (ortholog); genetic disease (ortholog); hair disease (ortholog); FOUND IN cytoplasm (ortholog) 5 96541024 96627722 + 22301074 116901777 MODEL JAAIVD010000023;XM_032903918 XP_032759809 eIF-2-alpha kinase GCN2 protein-coding 625933059 LOC116905106 Fanconi anemia group M protein homolog 7 78778628 78792213 + 22301074;30032202 116905106 MODEL JAAIVD010000026;XM_032907843 XP_032763734 protein-coding 625933066 LOC116884749 RNA-binding motif, single-stranded-interacting protein 2-like 15 34320176 34321184 + 116884749 MODEL JAAIVD010000010 pseudo 625933067 LOC116893498 sperm motility kinase Y-like 2 183271175 183292185 + 116893498 MODEL JAAIVD010000001 pseudo 625933068 LOC116899609 uncharacterized LOC116899609 4 159637191 159653934 - 116899609 MODEL JAAIVD010000003;XR_004387745 ncrna 625933073 Bend7 BEN domain containing 7 14 11064178 11145685 + 22301074 116883725 MODEL JAAIVD010000009;XM_032884955;XM_032884957;XM_032884958 XP_032740846;XP_032740848;XP_032740849 BEN domain-containing protein 7 protein-coding 625933091 Arl4c ARF like GTPase 4C ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 160731172 160739089 - 22301074;30032202 116899625 MODEL JAAIVD010000003;XM_032901588;XM_032901589 XP_032757479;XP_032757480 ADP ribosylation factor like GTPase 4C;ADP-ribosylation factor-like protein 4C protein-coding 625933100 LOC116885383 cytochrome P450 3A1-like 16 7943472 7976132 - 22301074;30032202 116885383 MODEL JAAIVD010000004;XM_032886662 XP_032742553 protein-coding 625933116 LOC116910974 heterogeneous nuclear ribonucleoprotein A1-like 10 89012658 89013774 - 116910974 MODEL JAAIVD010000005 pseudo 625933117 LOC116908453 small nucleolar RNA SNORD14 8 35404236 35404321 + 116908453 MODEL JAAIVD010000027;XR_004388971 snorna 625933120 LOC116901096 60S ribosomal protein L8-like 5 156435129 156443303 + 116901096 MODEL JAAIVD010000023 pseudo 625933121 Prr14l proline rich 14 like 11 71990639 72050930 + 116912886 MODEL JAAIVD010000006;XM_032917128;XM_032917129;XM_032917130;XM_032917131;XM_032917132;XM_032917133 XP_032773019;XP_032773020;XP_032773021;XP_032773022;XP_032773023;XP_032773024 protein PRR14L protein-coding 625933147 LOC116893287 serine/arginine-rich splicing factor 3-like 2 148137147 148137606 + 116893287 MODEL JAAIVD010000001 pseudo 625933148 LOC116897784 uncharacterized LOC116897784 4 3483036 3484950 + 116897784 MODEL JAAIVD010000003;XR_004387626 ncrna 625933152 LOC116886007 small nucleolar RNA SNORA17 16 35558621 35558750 - 116886007 MODEL JAAIVD010000004;XR_004386078 snorna 625933155 Spdl1 spindle apparatus coiled-coil protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); kinetochore binding (ortholog); INVOLVED IN cell migration (ortholog); establishment of mitotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Perinatal Death (ortholog); FOUND IN nucleus (ortholog); outer kinetochore (ortholog); spindle pole (ortholog) 9 7483073 7505301 - 22301074;30032202 116909966 MODEL JAAIVD010000002;XM_032913741 XP_032769632 protein Spindly protein-coding 625933170 LOC116900696 40S ribosomal protein S10-like 5 131849889 131850364 + 116900696 MODEL JAAIVD010000023 pseudo 625933171 Drosha drosha ribonuclease III ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); lipopolysaccharide binding (ortholog); primary miRNA binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH esophageal atresia (ortholog); hepatoblastoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); microprocessor complex (ortholog) 3 168154861 168263632 - 22301074;30032202 116897114 MODEL JAAIVD010000012;XM_032898756;XM_032898758 XP_032754647;XP_032754649 ribonuclease 3 protein-coding 625933210 LOC116910964 transcription factor 4-like 10 84942628 84944132 - 116910964 MODEL JAAIVD010000005 pseudo 625933211 LOC116907338 olfactory receptor 143-like 8 31973978 31974894 + 116907338 MODEL JAAIVD010000027 pseudo 625933212 LOC116894385 olfactory receptor 13A1-like 2 156805555 156806505 - 22301074 116894385 MODEL JAAIVD010000001;XM_032896091 XP_032751982 protein-coding 625933216 LOC116895205 voltage-dependent anion-selective channel protein 1-like 3 1893441 1983143 + 116895205 MODEL JAAIVD010000012 pseudo 625933217 LOC116910970 zinc finger protein 431-like 1 215243654 215258744 + 22301074 116910970 MODEL JAAIVD010000025;XM_032914690 XP_032770581 protein-coding 625933225 LOC116909348 angiotensin-converting enzyme 9 73121467 73141725 - 22301074;30032202 116909348 MODEL JAAIVD010000002;XM_032912897 XP_032768788 protein-coding 625933254 LOC116904151 ubiquitin-conjugating enzyme E2 variant 1-like 1 152913682 152914147 + 116904151 MODEL JAAIVD010000025 pseudo 625933255 LOC116915005 alpha-enolase-like 13 32061963 32066465 - 116915005 MODEL JAAIVD010000008 pseudo 625933256 LOC116885875 protein sidekick-1-like 16 11568482 11937494 - 30032202 116885875 MODEL JAAIVD010000004;XM_032887199 XP_032743090 protein-coding 625933264 Zdhhc14 zDHHC palmitoyltransferase 14 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 193047653 193316042 - 30032202 116892858 MODEL JAAIVD010000001;XM_032894752;XM_032894754;XM_032894755 XP_032750643;XP_032750645;XP_032750646 probable palmitoyltransferase ZDHHC14;zinc finger DHHC-type palmitoyltransferase 14 protein-coding 625933285 LOC116884923 putative 60S ribosomal protein L37a-like protein 15 12120172 12130999 + 116884923 MODEL JAAIVD010000010 pseudo 625933286 LOC116894545 uncharacterized protein C19orf85-like 2 177484073 177490877 - 116894545 MODEL JAAIVD010000001;XM_032896253 XP_032752144 protein-coding 625933291 LOC116893038 jupiter microtubule associated homolog 2-like 2 229283438 229284658 + 116893038 MODEL JAAIVD010000001 pseudo 625933292 Top2b DNA topoisomerase II beta ENCODES a protein that exhibits chromatin binding (ortholog); DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN axonogenesis (ortholog); B cell differentiation (ortholog); cellular response to ATP (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; doxorubicin response pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); B-Cell Immunodeficiency, Distal Limb Anomalies, and Urogenital Malformations (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterochromatin (ortholog); nucleolus (ortholog) 12 85716248 85777056 + 22301074;30032202 116913833 MODEL JAAIVD010000007;XM_032918145 XP_032774036 DNA topoisomerase 2-beta protein-coding 625933332 Zbtb41 zinc finger and BTB domain containing 41 10 19784170 19813420 + 22301074;30032202 116911014 MODEL JAAIVD010000005;XM_032914742;XM_032914743;XM_032914744;XM_032914746 XP_032770633;XP_032770634;XP_032770635;XP_032770637 zinc finger and BTB domain-containing protein 41 protein-coding 625933356 Nrg1 neuregulin 1 ENCODES a protein that exhibits chemorepellent activity (ortholog); ErbB-2 class receptor binding (ortholog); ErbB-3 class receptor binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); cardiac conduction system development (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amblyopia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) 13 54887582 55072895 + 22301074;30032202 116914548 MODEL JAAIVD010000008;XM_032918882;XM_032918883;XM_032918884;XM_032918885;XM_032918887;XM_032918888;XM_032918889;XM_032918890;XM_032918891;XM_032918892;XM_032918893;XM_032918894;XM_032918895;XM_032918896 XP_032774773;XP_032774774;XP_032774775;XP_032774776;XP_032774778;XP_032774779;XP_032774780;XP_032774781;XP_032774782;XP_032774783;XP_032774784;XP_032774785;XP_032774786;XP_032774787 pro-neuregulin-1, membrane-bound isoform protein-coding 625933398 Chic1 cysteine rich hydrophobic domain 1 ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) X 68413100 68455348 - 116888389 MODEL JAAIVD010000014;XM_032889663 XP_032745554 cysteine-rich hydrophobic domain-containing protein 1 protein-coding 625933408 Brsk2 BR serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); ATPase binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); distal axon (ortholog) 2 7518917 7571635 - 22301074;30032202 116890852 MODEL JAAIVD010000001;XM_032891401;XM_032891402;XM_032891403;XM_032891404;XM_032891405;XM_032891407;XM_032891408;XM_032891409;XM_032891410;XM_032891411;XM_032891412;XM_032891413;XM_032891414;XM_032891415;XM_032891416;XR_004386788;XR_004386789 XP_032747292;XP_032747293;XP_032747294;XP_032747295;XP_032747296;XP_032747298;XP_032747299;XP_032747300;XP_032747301;XP_032747302;XP_032747303;XP_032747304;XP_032747305;XP_032747306;XP_032747307 serine/threonine-protein kinase BRSK2 protein-coding 625933465 Trnai-gau transfer RNA isoleucine (anticodon GAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889686 MODEL JAAIVD010000051 trna 625933466 LOC116894155 olfactory receptor 2D3-like 2 104894629 104895555 - 22301074 116894155 MODEL JAAIVD010000001;XM_032895872 XP_032751763 protein-coding 625933469 G0s2 G0/G1 switch 2 INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 10 71259255 71260200 - 30032202 116911168 MODEL JAAIVD010000005;XM_032915030 XP_032770921 G0/G1 switch protein 2 protein-coding 625933475 Glo1 glyoxalase I ENCODES a protein that exhibits lactoylglutathione lyase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN glutathione metabolic process (ortholog); methylglyoxal metabolic process (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); depressive disorder (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 18 3267002 3287125 + 22301074 116887200 MODEL JAAIVD010000013;XM_032888756 XP_032744647 lactoylglutathione lyase protein-coding 625933485 Resp18 regulated endocrine specific protein 18 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH hypertension (ortholog); renal fibrosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); perikaryon (ortholog); rough endoplasmic reticulum lumen (ortholog) 4 148627434 148634111 - 30032202 116899530 MODEL JAAIVD010000003;XM_032901400 XP_032757291 regulated endocrine-specific protein 18 protein-coding 625933495 LOC116911635 contactin-associated protein like 5-1 10 77335566 78246434 - 116911635 MODEL JAAIVD010000005;XM_032915594 XP_032771485 protein-coding 625933524 LOC116903902 phosphatidylinositol 3,4,5-trisphosphate-dependent Rac exchanger 2 protein-like 1 145886401 145959409 + 30032202 116903902 MODEL JAAIVD010000025;XM_032906673 XP_032762564 protein-coding 625933535 Acadm acyl-CoA dehydrogenase medium chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); carnitine biosynthetic process (ortholog); carnitine metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Congenital Hydrocephalus 2, with or without Brain or Eye Anomalies (ortholog); genetic disease (ortholog); Liver Failure (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 3 7699251 7723798 + 22301074;30032202 116896143 MODEL JAAIVD010000012;XM_032897127 XP_032753018 medium-chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 625933551 LOC116906422 small nucleolar RNA SNORA21 7 37828854 37828982 + 116906422 MODEL JAAIVD010000026;XR_004388684 snorna 625933554 Tfdp1 transcription factor Dp-1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anoikis (ortholog); epidermis development (ortholog); negative regulation of fat cell proliferation (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); mismatch repair cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 70328528 70366935 - 22301074;30032202 116914403 MODEL JAAIVD010000008;XM_032918633;XM_032918635;XM_032918636;XM_032918637;XM_032918638;XM_032918639;XM_032918640;XM_032918641 XP_032774524;XP_032774526;XP_032774527;XP_032774528;XP_032774529;XP_032774530;XP_032774531;XP_032774532 protein-coding 625933594 F9 coagulation factor IX ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); metal ion binding (ortholog); INVOLVED IN blood coagulation (ortholog); proteolysis (ortholog); zymogen activation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH autosomal hemophilia A (ortholog); blood coagulation disease (ortholog); factor VIII deficiency (ortholog); FOUND IN extracellular space (ortholog) X 119094482 119123402 + 22301074;30032202 116888583 MODEL JAAIVD010000014;XM_032889882;XM_032889883 XP_032745773;XP_032745774 protein-coding 625933608 LOC116886554 uncharacterized LOC116886554 17 16094120 16101420 + 116886554 MODEL JAAIVD010000011;XR_004386113;XR_004386114 ncrna 625933616 LOC116910260 nuclear envelope pore membrane protein POM 121-like 9 32201655 32203898 - 116910260 MODEL JAAIVD010000002;XM_032914145 XP_032770036 protein-coding 625933619 Znf644 zinc finger protein 644 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription corepressor binding (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Myopia 21, Autosomal Dominant (ortholog) 11 16334694 16412913 - 30032202 116912840 MODEL JAAIVD010000006;XM_032917034;XM_032917036;XM_032917037;XM_032917038;XM_032917039;XM_032917040;XM_032917041;XM_032917042;XM_032917043;XM_032917044;XM_032917045 XP_032772925;XP_032772927;XP_032772928;XP_032772929;XP_032772930;XP_032772931;XP_032772932;XP_032772933;XP_032772934;XP_032772935;XP_032772936 protein-coding 625933659 LOC116895762 39S ribosomal protein L30, mitochondrial-like 3 45809909 45810867 + 116895762 MODEL JAAIVD010000012 pseudo 625933660 LOC116891421 PRAME family member 12-like 1 52738145 52740828 + 116891421 MODEL JAAIVD010000025 pseudo 625933661 LOC116899735 U2 spliceosomal RNA 4 532843 532970 + 116899735 MODEL JAAIVD010000003 pseudo 625933662 Myo1f myosin IF INVOLVED IN defense response to Gram-positive bacterium (ortholog); negative regulation of cell adhesion (ortholog); neutrophil degranulation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); sensorineural hearing loss (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytosol (ortholog); filamentous actin (ortholog) 1 158783124 158834709 - 22301074;30032202 116907145 MODEL JAAIVD010000025;XM_032910113 XP_032766004 unconventional myosin-If protein-coding 625933694 Ccnj cyclin J 2 39959525 39977803 + 30032202 116891154 MODEL JAAIVD010000001;XM_032891943;XM_032891944;XM_032891945;XM_032891946;XM_032891947 XP_032747834;XP_032747835;XP_032747836;XP_032747837;XP_032747838 cyclin-J protein-coding 625933714 Naxd NAD(P)HX dehydratase ENCODES a protein that exhibits ATP-dependent NAD(P)H-hydrate dehydratase activity (ortholog); INVOLVED IN metabolite repair (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Early-Onset Progressive Encephalopathy with Brain Edema and/or Leukoencephalopathy 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrion (ortholog) 13 72346355 72364388 - 30032202 116914280 MODEL JAAIVD010000008;XM_032918502;XM_032918503 XP_032774393;XP_032774394 ATP-dependent (S)-NAD(P)H-hydrate dehydratase protein-coding 625933731 Tnfrsf18 TNF receptor superfamily member 18 INVOLVED IN positive regulation of cell adhesion (ortholog); positive regulation of leukocyte migration (ortholog); positive regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH anogenital venereal wart (ortholog); HTLV-1-associated myelopathy/tropical spastic paraparesis (ortholog); leishmaniasis (ortholog); FOUND IN external side of plasma membrane (ortholog) 1 4625343 4627966 - 22301074;30032202 116891677 MODEL JAAIVD010000025;XM_032892937 XP_032748828 tumor necrosis factor receptor superfamily member 18 protein-coding 625933740 LOC116895120 U4 spliceosomal RNA 2 67340258 67340420 + 116895120 MODEL JAAIVD010000001 pseudo 625933741 LOC116885241 uncharacterized LOC116885241 16 29044402 29068403 - 116885241 MODEL JAAIVD010000004;XR_004385998 ncrna 625933747 Bbs10 Bardet-Biedl syndrome 10 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cone retinal bipolar cell differentiation (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 10 (ortholog) 1 189469378 189472497 + 22301074;30032202 116908879 MODEL JAAIVD010000025;XM_032912326 XP_032768217 Bardet-Biedl syndrome 10 protein protein-coding 625933753 LOC116895627 60S ribosomal protein L31-like 3 173011818 173012192 + 116895627 MODEL JAAIVD010000012 pseudo 625933754 Rapgef3 Rap guanine nucleotide exchange factor 3 ENCODES a protein that exhibits cAMP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN artery development (ortholog); associative learning (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyloidosis (ortholog); Arterial Injury (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) 1 270559170 270581161 - 22301074;30032202 116884539 MODEL JAAIVD010000025;XM_032885678 XP_032741569 protein-coding 625933785 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60839413 60839486 - 116897684 MODEL JAAIVD010000012 trna 625933786 Evx1 even-skipped homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); interneuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) 6 88744112 88747472 - 22301074;30032202 116902829 MODEL JAAIVD010000024;XM_032905162 XP_032761053 homeobox even-skipped homolog protein 1 protein-coding 625933792 Slc51a solute carrier family 51 member A ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Diabetes Complications (ortholog); FOUND IN basolateral plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 4 17283983 17297951 - 30032202 116898777 MODEL JAAIVD010000003;XM_032900114 XP_032756005 organic solute transporter subunit alpha;solute carrier family 51 subunit alpha protein-coding 625933805 LOC116912962 small Cajal body-specific RNA 4 11 5280580 5280709 + 116912962 MODEL JAAIVD010000006;XR_004389529 ncrna 625933808 Fbl fibrillarin ENCODES a protein that exhibits ATPase binding (ortholog); histone H2AQ104 methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA methylation (ortholog); sno(s)RNA metabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autoimmune disease (ortholog); Breast Neoplasms (ortholog); FOUND IN Cajal body (ortholog); chromosome (ortholog); dense fibrillar component (ortholog) 2 167802409 167811525 - 22301074;30032202 116892404 MODEL JAAIVD010000001;XM_032894082 XP_032749973 rRNA 2'-O-methyltransferase fibrillarin protein-coding 625933820 LOC116893218 olfactory receptor 5A2-like 2 114629596 114631053 - 116893218 MODEL JAAIVD010000001 pseudo 625933821 Itih4 inter-alpha-trypsin inhibitor heavy chain 4 INVOLVED IN acute-phase response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Bacteremia (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 13 6590140 6605499 + 116914275 MODEL JAAIVD010000008;XM_032918498 XP_032774389 inter-alpha-trypsin inhibitor heavy chain H4 protein-coding 625933848 Dusp2 dual specificity phosphatase 2 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); phosphoprotein phosphatase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) 5 106119404 106121724 + 22301074;30032202 116900617 MODEL JAAIVD010000023;XM_032902336 XP_032758227 dual specificity protein phosphatase 2 protein-coding 625933856 LOC116893024 eukaryotic initiation factor 4A-I-like 2 226770081 226771292 - 116893024 MODEL JAAIVD010000001 pseudo 625933857 LOC116890075 olfactory receptor 6C2-like 1 215122369 215123307 - 22301074;30032202 116890075 MODEL JAAIVD010000025;XM_032890838 XP_032746729 protein-coding 625933860 LOC116889890 60S acidic ribosomal protein P1-like 1 158662711 158663067 - 22301074;30032202 116889890 MODEL JAAIVD010000025;XM_032890714;XM_032890715 XP_032746605;XP_032746606 protein-coding 625933867 Arhgap9 Rho GTPase activating protein 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); ASSOCIATED WITH coronary artery vasospasm (ortholog); Experimental Liver Cirrhosis (ortholog) 1 205757271 205765281 + 22301074;30032202 116910034 MODEL JAAIVD010000025;XM_032913824;XM_032913831 XP_032769715;XP_032769722 rho GTPase-activating protein 9 protein-coding 625933891 LOC116893478 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like 2 180662981 180670102 - 116893478 MODEL JAAIVD010000001 pseudo 625933892 Zswim2 zinc finger SWIM-type containing 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); protein polyubiquitination (ortholog) 5 61354431 61376640 - 22301074;30032202 116900222 MODEL JAAIVD010000023;XM_032901975 XP_032757866 E3 ubiquitin-protein ligase ZSWIM2 protein-coding 625933904 Kera keratocan INVOLVED IN cornea development in camera-type eye (ortholog); ASSOCIATED WITH arcus senilis (ortholog); cornea plana (ortholog); Cornea Plana 2 (ortholog) 1 176795652 176806583 + 22301074;30032202 116913321 MODEL JAAIVD010000025;XM_032917500 XP_032773391 protein-coding 625933910 LOC116897949 olfactory receptor 187-like 4 43105815 43106747 + 22301074;30032202 116897949 MODEL JAAIVD010000003;XM_032899349 XP_032755240 protein-coding 625933914 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 29781665 29781737 - 116890641 MODEL JAAIVD010000025 trna 625933915 LOC116892098 serum amyloid A-3 protein 2 152662200 152665684 + 22301074 116892098 MODEL JAAIVD010000001;XM_032893575 XP_032749466 protein-coding 625933923 Gfod2 Gfo/Idh/MocA-like oxidoreductase domain containing 2 INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog) 17 25450031 25462933 - 22301074;30032202 116886290 MODEL JAAIVD010000011;XM_032887722;XM_032887723 XP_032743613;XP_032743614 glucose-fructose oxidoreductase domain containing 2;glucose-fructose oxidoreductase domain-containing protein 2 protein-coding 625933934 LOC116888715 small nuclear ribonucleoprotein E X 115850695 115851136 - 22301074;30032202 116888715 MODEL JAAIVD010000014;XM_032890001 XP_032745892 protein-coding 625933939 LOC116895736 zinc finger protein 844-like 3 28600642 28601307 + 116895736 MODEL JAAIVD010000012 pseudo 625933940 LOC116890497 small nucleolar RNA SNORA48 1 181779105 181779248 + 116890497 MODEL JAAIVD010000025;XR_004386683 snorna 625933943 Lin9 lin-9 DREAM MuvB core complex component FOUND IN nucleoplasm (ortholog) 10 58969345 59013944 + 30032202 116911419 MODEL JAAIVD010000005;XM_032915381;XM_032915382;XM_032915383;XM_032915384 XP_032771272;XP_032771273;XP_032771274;XP_032771275 protein lin-9 homolog protein-coding 625933972 LOC116906936 high mobility group nucleosome-binding domain-containing protein 5-like 8 111120914 111121869 + 22301074;30032202 116906936 MODEL JAAIVD010000027;XM_032909860 XP_032765751 protein-coding 625933977 LOC116883454 elongation factor 1-alpha 1-like 14 46373288 46374681 - 116883454 MODEL JAAIVD010000009 pseudo 625933978 LOC116883807 uncharacterized LOC116883807 14 78501434 78506188 + 116883807 MODEL JAAIVD010000009;XR_004385791 ncrna 625933982 LOC116885083 U6 spliceosomal RNA 15 27565722 27565826 + 116885083 MODEL JAAIVD010000010;XR_004385956 snrna 625933985 LOC116892916 protein SOGA3 2 203617059 203627286 - 22301074 116892916 MODEL JAAIVD010000001;XM_032894842;XM_032894843 XP_032750733;XP_032750734 protein-coding 625933998 LOC116888827 SEC23-interacting protein-like X 79316960 79320320 + 22301074;30032202 116888827 MODEL JAAIVD010000014;XM_032890103 XP_032745994 protein-coding 625934002 LOC116892417 zinc finger protein 60-like 2 168173606 168184416 - 30032202 116892417 MODEL JAAIVD010000001;XM_032894098 XP_032749989 protein-coding 625934008 Fam76a family with sequence similarity 76 member A FOUND IN nucleoplasm (ortholog) 1 25313395 25340928 + 116895358 MODEL JAAIVD010000025;XM_032896659 XP_032752550 protein FAM76A protein-coding 625934021 Bap1 BRCA1 associated deubiquitinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); common myeloid progenitor cell proliferation (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); basal cell carcinoma (ortholog); Bone Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 6954481 6963034 + 22301074;30032202 116914239 MODEL JAAIVD010000008;XM_032918447 XP_032774338 BRCA1 associated protein 1;ubiquitin carboxyl-terminal hydrolase BAP1 protein-coding 625934042 LOC116888724 putative P2Y purinoceptor 10 X 64548234 64570189 - 22301074;30032202 116888724 MODEL JAAIVD010000014;XM_032890015 XP_032745906 protein-coding 625934048 LOC116889734 S-adenosylmethionine synthase-like 22301074;30032202 116889734 MODEL JAAIVD010000068;XM_032890607 XP_032746498 protein-coding 625934049 Pianp PILR alpha associated neural protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN cerebellum development (ortholog); dentate gyrus development (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); presynapse (ortholog) 6 22892488 22898646 - 30032202 116903266 MODEL JAAIVD010000024;XM_032905676 XP_032761567 PILR alpha-associated neural protein protein-coding 625934059 LOC116883571 histone H2B type 1-C/E/F/G/I 14 42566042 42566446 - 22301074;30032202 116883571 MODEL JAAIVD010000009;XM_032884753 XP_032740644 protein-coding 625934063 Ccdc60 coiled-coil domain containing 60 16 37545818 37703992 + 116885510 MODEL JAAIVD010000004;XM_032886802;XM_032886803 XP_032742693;XP_032742694 coiled-coil domain-containing protein 60 protein-coding 625934087 LOC116900414 olfactory receptor 4C16-like 5 70317868 70318790 - 116900414 MODEL JAAIVD010000023 pseudo 625934088 LOC116897459 small nucleolar RNA SNORA71 3 50220257 50220388 - 116897459 MODEL JAAIVD010000012;XR_004387489 snorna 625934091 Itm2c integral membrane protein 2C ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron differentiation (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); perinuclear region of cytoplasm (ortholog) 4 158036517 158050220 + 30032202 116899584 MODEL JAAIVD010000003;XM_032901523 XP_032757414 protein-coding 625934101 Pmpca peptidase, mitochondrial processing subunit alpha ENCODES a protein that exhibits endopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); protein processing involved in protein targeting to mitochondrion (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 2 (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 10691511 10700976 - 22301074;30032202 116901270 MODEL JAAIVD010000023;XM_032903034;XM_032903035 XP_032758925;XP_032758926 mitochondrial-processing peptidase subunit alpha protein-coding 625934121 Emc6 ER membrane protein complex subunit 6 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 9 42335560 42336426 + 30032202 116908902 MODEL JAAIVD010000002;XM_032912357 XP_032768248 protein-coding 625934127 Asmt acetylserotonin O-methyltransferase ENCODES a protein that exhibits acetylserotonin O-methyltransferase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN melatonin biosynthetic process (ortholog); negative regulation of male gonad development (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); Wilson disease (ortholog) 16 14891895 14897203 - 30032202 116885896 MODEL JAAIVD010000004;XM_032887215 XP_032743106 protein-coding 625934139 Fnbp1 formin binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN plasma membrane (ortholog) 5 4484881 4599148 + 22301074 116901168 MODEL JAAIVD010000023;XM_032902816;XM_032902817;XM_032902818;XM_032902819;XM_032902820;XM_032902821;XM_032902822;XM_032902823;XM_032902824;XM_032902825;XM_032902826 XP_032758707;XP_032758708;XP_032758709;XP_032758710;XP_032758711;XP_032758712;XP_032758713;XP_032758714;XP_032758715;XP_032758716;XP_032758717 formin-binding protein 1 protein-coding 625934176 LOC116895539 TD and POZ domain-containing protein 5-like 3 120852603 120859293 - 30032202 116895539 MODEL JAAIVD010000012;XM_032896782;XR_004387283 XP_032752673 protein-coding 625934186 Nt5c 5', 3'-nucleotidase, cytosolic ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); identical protein binding (ortholog); nucleotidase activity (ortholog); INVOLVED IN allantoin metabolic process (ortholog); amide catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 68599188 68601202 + 22301074;30032202 116909646 MODEL JAAIVD010000002;XM_032913294 XP_032769185 5'(3')-deoxyribonucleotidase, cytosolic type protein-coding 625934195 Cmtm3 CKLF like MARVEL transmembrane domain containing 3 INVOLVED IN blastocyst hatching (ortholog); positive regulation of B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 17 12624735 12631729 + 22301074 116886672 MODEL JAAIVD010000011;XM_032888164 XP_032744055 CKLF-like MARVEL transmembrane domain-containing protein 3 protein-coding 625934204 Cd180 CD180 molecule ENCODES a protein that exhibits lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); B cell proliferation involved in immune response (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitotic spindle (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 194577609 194589645 - 22301074;30032202 116895666 MODEL JAAIVD010000012;XM_032896872 XP_032752763 CD180 antigen protein-coding 625934211 LOC116899335 uncharacterized LOC116899335 4 118803947 118848728 - 116899335 MODEL JAAIVD010000003;XR_004387709;XR_004387710;XR_004387711;XR_004387712;XR_004387713;XR_004387714;XR_004387715;XR_004387716;XR_004387717 ncrna 625934236 LOC116885110 small nucleolar RNA SNORD63 15 9422533 9422600 + 116885110 MODEL JAAIVD010000010;XR_004385975 snorna 625934239 LOC116914354 beta-defensin 15-like 13 64563682 64566317 + 22301074 116914354 MODEL JAAIVD010000008;XM_032918568 XP_032774459 protein-coding 625934243 Fam124b family with sequence similarity 124 member B FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 4 153226260 153242252 - 30032202 116898241 MODEL JAAIVD010000003;XM_032899592 XP_032755483 protein FAM124B protein-coding 625934247 LOC116912114 solute carrier family 25 member 51-like 11 22186111 22188035 + 116912114 MODEL JAAIVD010000006;XM_032916018 XP_032771909 protein-coding 625934252 Znf366 zinc finger protein 366 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to estrogen (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); DiGeorge syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 197330711 197350428 - 30032202 116895672 MODEL JAAIVD010000012;XM_032896876 XP_032752767 protein-coding 625934259 LOC116895247 olfactory receptor 149-like 3 60661 61596 + 22301074 116895247 MODEL JAAIVD010000012;XM_032896567 XP_032752458 protein-coding 625934262 Mier2 MIER family member 2 ENCODES a protein that exhibits histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 155319174 155334896 + 30032202 116905785 MODEL JAAIVD010000025;XM_032908764 XP_032764655 mesoderm induction early response protein 2 protein-coding 625934280 LOC116909589 uncharacterized LOC116909589 9 66529100 66562460 + 116909589 MODEL JAAIVD010000002;XR_004389083 ncrna 625934285 Slc8a1 solute carrier family 8 member A1 ENCODES a protein that exhibits ankyrin binding (ortholog); calcium ion binding (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion homeostasis (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Cardiomegaly (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) 7 11343528 11680513 + 22301074;30032202 116905831 MODEL JAAIVD010000026;XM_032908797;XM_032908798;XM_032908799;XM_032908800;XM_032908801;XM_032908802;XM_032908803;XM_032908804;XM_032908805;XM_032908807;XM_032908808 XP_032764688;XP_032764689;XP_032764690;XP_032764691;XP_032764692;XP_032764693;XP_032764694;XP_032764695;XP_032764696;XP_032764698;XP_032764699 sodium/calcium exchanger 1 protein-coding 625934320 LOC116907444 small nuclear ribonucleoprotein G 8 60051641 60052029 + 22301074;30032202 116907444 MODEL JAAIVD010000027;XM_032910416 XP_032766307 protein-coding 625934325 LOC116912284 NACHT and WD repeat domain-containing protein 2-like 11 20678115 20777848 + 116912284 MODEL JAAIVD010000006;XM_032916279 XP_032772170 protein-coding 625934332 Fip1l1 factor interacting with PAPOLA and CPSF1 PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH congestive heart failure (ortholog); Eosinophilia (ortholog); hypereosinophilic syndrome (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 31308878 31369541 + 30032202 116912074 MODEL JAAIVD010000006;XM_032915942;XM_032915943;XM_032915944;XM_032915945;XM_032915946;XM_032915947;XM_032915948;XM_032915949;XM_032915950;XM_032915951;XM_032915952;XM_032915954 XP_032771833;XP_032771834;XP_032771835;XP_032771836;XP_032771837;XP_032771838;XP_032771839;XP_032771840;XP_032771841;XP_032771842;XP_032771843;XP_032771845 pre-mRNA 3'-end-processing factor FIP1 protein-coding 625934381 LOC116892651 leukocyte immunoglobulin-like receptor subfamily B member 4 2 176993059 177010866 - 116892651 MODEL JAAIVD010000001;XM_032894472 XP_032750363 protein-coding 625934392 LOC116907670 olfactory receptor 148 8 82408484 82409419 + 22301074 116907670 MODEL JAAIVD010000027;XM_032910764 XP_032766655 protein-coding 625934396 LOC116892484 uncharacterized LOC116892484 2 170128876 170129854 + 116892484 MODEL JAAIVD010000001;XR_004386952 ncrna 625934401 Atg3 autophagy related 3 ENCODES a protein that exhibits Atg12 transferase activity (ortholog); Atg8-family conjugating enzyme activity (ortholog); Atg8-family ligase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 29921959 29950113 + 30032202 116898871 MODEL JAAIVD010000003;XM_032900240 XP_032756131 ubiquitin-like-conjugating enzyme ATG3 protein-coding 625934416 Pard3b par-3 family cell polarity regulator beta ASSOCIATED WITH autism spectrum disorder (ortholog); Neurodevelopmental Disorders (ortholog); schizophrenia (ortholog); FOUND IN cell junction (ortholog); protein-containing complex (ortholog) 4 135664792 136651677 + 22301074;30032202 116899439 MODEL JAAIVD010000003;XM_032901196 XP_032757087 partitioning defective 3 homolog B protein-coding 625934443 Ndufaf6 NADH:ubiquinone oxidoreductase complex assembly factor 6 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH Fanconi renotubular syndrome 5 (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 132634192 132657442 + 22301074;30032202 116903455 MODEL JAAIVD010000025;XM_032906009 XP_032761900 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6 protein-coding 625934456 Mmp27 matrix metallopeptidase 27 FOUND IN endoplasmic reticulum (ortholog) 8 3803664 3813520 + 22301074;30032202 116907226 MODEL JAAIVD010000027;XM_032910189 XP_032766080 matrix metalloproteinase-27 protein-coding 625934470 LOC116902614 small nucleolar RNA SNORA40 5 31258012 31258132 + 116902614 MODEL JAAIVD010000023 pseudo 625934471 LOC116904299 60S ribosomal protein L30-like 6 44123918 44124283 - 116904299 MODEL JAAIVD010000024 pseudo 625934472 Tulp3 TUB like protein 3 ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); brain development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); HEPATORENOCARDIAC DEGENERATIVE FIBROSIS (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axoneme (ortholog); ciliary basal body (ortholog) 6 19344979 19383274 + 30032202 116903218 MODEL JAAIVD010000024;XM_032905594;XM_032905595 XP_032761485;XP_032761486 tubby-related protein 3 protein-coding 625934490 LOC116888524 ralBP1-associated Eps domain-containing protein 2 X 20934679 20989051 - 22301074;30032202 116888524 MODEL JAAIVD010000014;XM_032889822 XP_032745713 protein-coding 625934505 LOC116887908 60S ribosomal protein L34-like X 53963057 53966698 + 22301074;30032202 116887908 MODEL JAAIVD010000014;XM_032889381 XP_032745272 protein-coding 625934510 LOC116889979 uncharacterized LOC116889979 1 172192436 172207140 - 116889979 MODEL JAAIVD010000025;XR_004386518;XR_004386519 ncrna 625934517 Myoz3 myozenin 3 FOUND IN Z disc (ortholog) 15 71354004 71370601 + 22301074;30032202 116884717 MODEL JAAIVD010000010;XM_032885903 XP_032741794 myozenin-3 protein-coding 625934525 LOC116904555 killer cell lectin-like receptor subfamily I member 1 6 17872501 17903020 + 30032202 116904555 MODEL JAAIVD010000024;XM_032907350 XP_032763241 protein-coding 625934536 LOC116906401 small nucleolar RNA SNORD113/SNORD114 family 7 127218380 127218450 + 116906401 MODEL JAAIVD010000026;XR_004388667 snorna 625934539 Plin5 perilipin 5 ENCODES a protein that exhibits identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN cell activation (ortholog); gene expression (ortholog); intracellular signaling cassette (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 4 87501087 87506708 - 30032202 116898060 MODEL JAAIVD010000003;XM_032899456 XP_032755347 perilipin-5 protein-coding 625934551 LOC116911200 protein SMG5-like 1 219238730 219356554 + 22301074;30032202 116911200 MODEL JAAIVD010000025;XM_032915077;XM_032915085;XM_032915092;XM_032915103;XM_032915112;XM_032915121 XP_032770968;XP_032770976;XP_032770983;XP_032770994;XP_032771003;XP_032771012 protein-coding 625934572 Tmem59 transmembrane protein 59 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); positive regulation of autophagy (ortholog); protein glycosylation (ortholog); ASSOCIATED WITH Estrogen Resistance (ortholog); FOUND IN Golgi cis cisterna (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) 1 47610346 47631582 - 30032202 116899305 MODEL JAAIVD010000025;XM_032900966 XP_032756857 protein-coding 625934584 Atp2b4 ATPase plasma membrane Ca2+ transporting 4 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calmodulin binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH dystonia (ortholog); gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN basolateral plasma membrane (ortholog); ciliary basal body (ortholog); cilium (ortholog) 10 1888633 1986273 + 22301074;30032202 116911096 MODEL JAAIVD010000005;XM_032914927 XP_032770818 plasma membrane calcium-transporting ATPase 4 protein-coding 625934609 LOC116892722 zinc finger protein 583 2 179803072 179823709 + 30032202 116892722 MODEL JAAIVD010000001;XM_032894590;XM_032894591;XM_032894592;XM_032894593 XP_032750481;XP_032750482;XP_032750483;XP_032750484 protein-coding 625934629 Stpg2 sperm tail PG-rich repeat containing 2 3 19715779 19944332 - 116895228 MODEL JAAIVD010000012;XM_032896555 XP_032752446 sperm-tail PG-rich repeat-containing protein 2 protein-coding 625934647 LOC116887831 60S ribosomal protein L7-like 1 X 36819798 36820590 + 116887831 MODEL JAAIVD010000014 pseudo 625934648 LOC116913074 PHD finger protein 11-like 12 64982735 64986155 + 116913074 MODEL JAAIVD010000007;XM_032917207 XP_032773098 protein-coding 625934656 LOC116889524 U1 spliceosomal RNA X 11855973 11856134 - 116889524 MODEL JAAIVD010000014;XR_004386466 snrna 625934659 LOC116900847 WW domain-binding protein 1-like 5 61062475 61063266 - 116900847 MODEL JAAIVD010000023 pseudo 625934660 Cnot6l CCR4-NOT transcription complex subunit 6 like ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN mRNA destabilization (ortholog); nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 8083319 8174256 + 22301074;30032202 116912871 MODEL JAAIVD010000006;XM_032917091;XM_032917092;XM_032917093;XM_032917094 XP_032772982;XP_032772983;XP_032772984;XP_032772985 CCR4-NOT transcription complex subunit 6-like protein-coding 625934685 Atp8b3 ATPase phospholipid transporting 8B3 INVOLVED IN binding of sperm to zona pellucida (ortholog); establishment of localization in cell (ortholog); phospholipid translocation (ortholog); FOUND IN acrosomal vesicle (ortholog); membrane (ortholog) 1 154349331 154366327 + 22301074;30032202 116906739 MODEL JAAIVD010000025;XM_032909601 XP_032765492 phospholipid-transporting ATPase IK protein-coding 625934715 LOC116900566 olfactory receptor 4F3/4F16/4F29-like 5 90219742 90220644 + 116900566 MODEL JAAIVD010000023 pseudo 625934716 LOC116886159 40S ribosomal protein S2-like 1 10901540 10903605 - 116886159 MODEL JAAIVD010000025 pseudo 625934717 Dcbld2 discoidin, CUB and LCCL domain containing 2 INVOLVED IN negative regulation of cell growth (ortholog); wound healing (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 42400402 42459228 + 116898913 MODEL JAAIVD010000003;XM_032900322 XP_032756213 discoidin, CUB and LCCL domain-containing protein 2 protein-coding 625934737 LOC116909832 olfactory receptor 56-like 9 39770387 39771334 + 22301074 116909832 MODEL JAAIVD010000002;XM_032913549 XP_032769440 protein-coding 625934740 Elavl3 ELAV like RNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 8 18268199 18302289 - 22301074 116908074 MODEL JAAIVD010000027;XM_032911349 XP_032767240 ELAV-like protein 3 protein-coding 625934751 LOC116893123 60S ribosomal protein L18-like 2 75150866 75168886 - 116893123 MODEL JAAIVD010000001 pseudo 625934752 LOC116898840 cytochrome c oxidase copper chaperone ENCODES a protein that exhibits copper chaperone activity (ortholog); copper ion binding (ortholog); cuprous ion binding (ortholog); INVOLVED IN heart development (ortholog); mitochondrial cytochrome c oxidase assembly (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Chronic Hepatitis (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 4 23296148 23301941 + 22301074;30032202 116898840 MODEL JAAIVD010000003;XM_032900194 XP_032756085 protein-coding 625934759 LOC116896432 uncharacterized LOC116896432 1 30939439 30953011 - 116896432 MODEL JAAIVD010000025;XR_004387337 ncrna 625934764 LOC116895804 heterogeneous nuclear ribonucleoprotein F-like 3 65976879 65978186 - 116895804 MODEL JAAIVD010000012 pseudo 625934765 Amigo3 adhesion molecule with Ig like domain 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); negative regulation of neuron projection development (ortholog); nervous system development (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); sciatic neuropathy (ortholog); Spinal Cord Compression (ortholog) 8 99381095 99384239 + 22301074;30032202 116907564 MODEL JAAIVD010000027;XM_032910588 XP_032766479 amphoterin-induced protein 3 protein-coding 625934770 Ngdn neuroguidin INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of translation at postsynapse (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 12 69972120 69979325 - 30032202 116913689 MODEL JAAIVD010000007;XM_032917980;XM_032917981;XM_032917982 XP_032773871;XP_032773872;XP_032773873 protein-coding 625934791 LOC116893383 ornithine decarboxylase-like 2 167660640 167663642 - 116893383 MODEL JAAIVD010000001 pseudo 625934792 Psmd7 proteasome 26S subunit, non-ATPase 7 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN proteasome complex (ortholog); proteasome regulatory particle (ortholog) 17 27304449 27312029 - 22301074;30032202 116886384 MODEL JAAIVD010000011;XM_032887851 XP_032743742 26S proteasome non-ATPase regulatory subunit 7 protein-coding 625934803 LOC116913841 eukaryotic translation initiation factor 1-like 12 26340364 26340656 - 116913841 MODEL JAAIVD010000007 pseudo 625934804 Angpt4 angiopoietin 4 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); transmembrane receptor protein tyrosine kinase activator activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); endothelial cell proliferation (ortholog); negative regulation of angiogenesis (ortholog); FOUND IN extracellular space (ortholog) 5 131278411 131311201 + 30032202 116900691 MODEL JAAIVD010000023;XM_032902393 XP_032758284 angiopoietin-4 protein-coding 625934817 Usp48 ubiquitin specific peptidase 48 ENCODES a protein that exhibits deubiquitinase activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autosomal dominant nonsyndromic deafness 85 (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 20564494 20635693 - 22301074;30032202 116894143 MODEL JAAIVD010000025;XM_032895865 XP_032751756 ubiquitin carboxyl-terminal hydrolase 48 protein-coding 625934849 LOC116888798 superoxide dismutase [Mn], mitochondrial-like 1 102695001 102695546 + 116888798 MODEL JAAIVD010000025 pseudo 625934850 LOC116909544 phosphoglycerate mutase 1-like 9 90282256 90283700 - 22301074;30032202 116909544 MODEL JAAIVD010000002;XM_032913159 XP_032769050 protein-coding 625934855 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 865032 865104 - 116910826 MODEL JAAIVD010000002 trna 625934856 Tas2r3 taste 2 receptor member 3 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) 6 99318248 99319532 - 22301074;30032202 116903915 MODEL JAAIVD010000024;XM_032906679 XP_032762570 taste receptor type 2 member 3 protein-coding 625934861 Arl1 ARF like GTPase 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); protein localization to Golgi apparatus (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 1 167782332 167794504 + 22301074;30032202 116907805 MODEL JAAIVD010000025;XM_032910967 XP_032766858 ADP ribosylation factor like GTPase 1;ADP-ribosylation factor-like protein 1 protein-coding 625934871 Abcc12 ATP binding cassette subfamily C member 12 ASSOCIATED WITH bone marrow disease (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN endoplasmic reticulum (ortholog) 17 13836575 13907935 - 22301074;30032202 116886237 MODEL JAAIVD010000011;XM_032887643;XM_032887644;XM_032887645 XP_032743534;XP_032743535;XP_032743536 multidrug resistance-associated protein 9 protein-coding 625934913 LOC116885064 small nucleolar RNA SNORA17 15 32586393 32586494 + 116885064 MODEL JAAIVD010000010 pseudo 625934914 LOC116902467 U6 spliceosomal RNA 5 84080657 84080763 + 116902467 MODEL JAAIVD010000023;XR_004388085 snrna 625934917 LOC116883538 cathepsin L1 14 75206430 75213226 + 30032202 116883538 MODEL JAAIVD010000009;XM_032884709 XP_032740600 protein-coding 625934929 LOC116893757 peptidyl-prolyl cis-trans isomerase D-like 2 28104172 28105284 - 116893757 MODEL JAAIVD010000001 pseudo 625934930 LOC116907302 60S ribosomal protein L30-like 8 26215362 26237738 + 116907302 MODEL JAAIVD010000027 pseudo 625934931 Tsks testis specific serine kinase substrate ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN centriole (ortholog) 2 154586047 154599944 - 30032202 116892182 MODEL JAAIVD010000001;XM_032893702;XM_032893703 XP_032749593;XP_032749594 testis-specific serine kinase substrate protein-coding 625934947 Creb3l4 cAMP responsive element binding protein 3 like 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); prostate adenocarcinoma (ortholog); prostate carcinoma in situ (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 3 63399376 63405137 + 30032202 116896616 MODEL JAAIVD010000012;XM_032897876;XM_032897877 XP_032753767;XP_032753768 cyclic AMP-responsive element-binding protein 3-like protein 4 protein-coding 625934963 LOC116904773 small nucleolar RNA SNORA17 6 41990889 41991025 + 116904773 MODEL JAAIVD010000024;XR_004388440 snorna 625934966 Lrrc8c leucine rich repeat containing 8 VRAC subunit C ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); TIMES Syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); monoatomic ion channel complex (ortholog) 11 15242452 15329634 + 22301074 116912237 MODEL JAAIVD010000006;XM_032916213;XM_032916214;XM_032916215 XP_032772104;XP_032772105;XP_032772106 volume-regulated anion channel subunit LRRC8C protein-coding 625934978 LOC116915176 U6 spliceosomal RNA 13 70423973 70424072 + 116915176 MODEL JAAIVD010000008 pseudo 625934979 Incenp inner centromere protein ENCODES a protein that exhibits molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); melanoma (ortholog); nephronophthisis (ortholog); FOUND IN central element (ortholog); chromocenter (ortholog); chromosome passenger complex (ortholog) 2 151309992 151337311 + 30032202 116892081 MODEL JAAIVD010000001;XM_032893551;XM_032893552;XM_032893553;XM_032893554;XM_032893555 XP_032749442;XP_032749443;XP_032749444;XP_032749445;XP_032749446 protein-coding 625935017 Adm adrenomedullin ENCODES a protein that exhibits adrenomedullin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; p38 MAPK signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acidoses (ortholog); Albuminuria (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 2 90815292 90817518 - 22301074;30032202 116891660 MODEL JAAIVD010000001;XM_032892911 XP_032748802 protein-coding 625935025 LOC116894890 U6 spliceosomal RNA 2 8295240 8295335 + 116894890 MODEL JAAIVD010000001 pseudo 625935026 LOC116896406 chitinase-like protein 3 3 51921490 51942487 - 22301074;30032202 116896406 MODEL JAAIVD010000012;XM_032897549 XP_032753440 protein-coding 625935039 Gins2 GINS complex subunit 2 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleus (ortholog) 17 40217425 40229483 - 22301074;30032202 116886691 MODEL JAAIVD010000011;XM_032888188;XM_032888189 XP_032744079;XP_032744080 DNA replication complex GINS protein PSF2 protein-coding 625935053 Ppp2r5e protein phosphatase 2 regulatory subunit B'epsilon ASSOCIATED WITH Chromosomal Instability (ortholog); Micronuclei, Chromosome-Defective (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytosol (ortholog) 7 89616683 89765223 - 22301074;30032202 116905173 MODEL JAAIVD010000026;XM_032907946;XM_032907947 XP_032763837;XP_032763838 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit epsilon isoform protein-coding 625935073 LOC116900902 adaptin ear-binding coat-associated protein 1-like 5 76165698 76364684 + 116900902 MODEL JAAIVD010000023 pseudo 625935074 Ttyh2 tweety family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 9 74604667 74648274 - 30032202 116909650 MODEL JAAIVD010000002;XM_032913303 XP_032769194 protein tweety homolog 2 protein-coding 625935092 Arl6ip1 ARL6 interacting reticulophagy regulator 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cotranslational protein targeting to membrane (ortholog); endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 61 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 2 83510577 83520164 + 116891614 MODEL JAAIVD010000001;XM_032892822 XP_032748713 ADP ribosylation factor like GTPase 6 interacting protein 1;ADP-ribosylation factor-like protein 6-interacting protein 1;ARF like GTPase 6 interacting protein 1 protein-coding 625935102 Ccdc175 coiled-coil domain containing 175 7 85775868 86240077 - 116905147 MODEL JAAIVD010000026;XM_032907915 XP_032763806 coiled-coil domain-containing protein 175 protein-coding 625935127 Pde3b phosphodiesterase 3B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 2 87016316 87135460 - 22301074;30032202 116893136 MODEL JAAIVD010000001;XM_032895065 XP_032750956 cGMP-inhibited 3',5'-cyclic phosphodiesterase B protein-coding 625935148 LOC116888079 60S acidic ribosomal protein P0-like X 90416933 90435853 - 116888079 MODEL JAAIVD010000014 pseudo 625935149 Necap2 NECAP endocytosis associated 2 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN clathrin vesicle coat (ortholog) 1 17069413 17081578 + 22301074;30032202 116893464 MODEL JAAIVD010000025;XM_032895227;XM_032895231 XP_032751118;XP_032751122 adaptin ear-binding coat-associated protein 2 protein-coding 625935165 Sfxn2 sideroflexin 2 INVOLVED IN mitochondrial transmembrane transport (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 46046027 46067344 + 22301074;30032202 116891253 MODEL JAAIVD010000001;XM_032892133 XP_032748024 sideroflexin-2 protein-coding 625935181 Mpp1 MAGUK p55 scaffold protein 1 INVOLVED IN regulation of neutrophil chemotaxis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN centriolar satellite (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) X 302067 310291 + 30032202 116888889 MODEL JAAIVD010000014;XM_032890151 XP_032746042 55 kDa erythrocyte membrane protein;membrane palmitoylated protein 1 protein-coding 625935197 Moxd1 monooxygenase DBH like 1 ASSOCIATED WITH silicosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 210310853 210391410 + 22301074;30032202 116892945 MODEL JAAIVD010000001;XM_032894895 XP_032750786 DBH-like monooxygenase protein 1 protein-coding 625935212 LOC116906518 U4 spliceosomal RNA 7 99199818 99199926 - 116906518 MODEL JAAIVD010000026 pseudo 625935213 Rbbp4 RB binding protein 4, chromatin remodeling factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; ISWI family mediated chromatin remodeling pathway; FOUND IN ATPase complex (ortholog); CAF-1 complex (ortholog); chromatin (ortholog) 1 28813792 28833107 + 30032202 116896195 MODEL JAAIVD010000025;XM_032897246 XP_032753137 histone-binding protein RBBP4 protein-coding 625935229 Afdn afadin, adherens junction formation factor ENCODES a protein that exhibits actin filament binding (ortholog); cell adhesion molecule binding (ortholog); LIM domain binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); bicellular tight junction assembly (ortholog); brain morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast carcinoma (ortholog); Parkinson's disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 2 183478953 183499338 - 30032202 116892775 MODEL JAAIVD010000001;XM_032894650 XP_032750541 afadin protein-coding 625935240 LOC116886984 cyclin-dependent kinase 2-interacting protein-like 18 45375978 45376614 - 116886984 MODEL JAAIVD010000013 pseudo 625935241 LOC116906134 60S ribosomal protein L23a-like 7 87276807 87279481 - 22301074;30032202 116906134 MODEL JAAIVD010000026;XM_032909126 XP_032765017 protein-coding 625935245 LOC116884132 U6 spliceosomal RNA 14 81737497 81737605 + 116884132 MODEL JAAIVD010000009;XR_004385856 snrna 625935248 LOC116894750 DNA polymerase epsilon subunit 3-like 2 142755042 142755496 + 116894750 MODEL JAAIVD010000001 pseudo 625935249 LOC116890590 U1 spliceosomal RNA 1 19372396 19372552 + 116890590 MODEL JAAIVD010000025;XR_004386749 snrna 625935252 LOC116893564 40S ribosomal protein S6-like 2 217548019 217697576 + 116893564 MODEL JAAIVD010000001 pseudo 625935253 LOC116897933 olfactory receptor 183 4 42872066 42872998 + 22301074;30032202 116897933 MODEL JAAIVD010000003;XM_032899333 XP_032755224 protein-coding 625935257 Npff neuropeptide FF-amide peptide precursor ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide activity (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); excitatory postsynaptic potential (ortholog); maternal process involved in female pregnancy (ortholog); ASSOCIATED WITH Inflammation (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); extracellular space (ortholog) 1 260557197 260560602 + 22301074;30032202 116883342 MODEL JAAIVD010000025;XM_032884421 XP_032740312 pro-FMRFamide-related neuropeptide FF protein-coding 625935264 LOC116902539 small nucleolar RNA SNORA19 5 103900776 103900907 - 116902539 MODEL JAAIVD010000023;XR_004388142 snorna 625935267 Cmya5 cardiomyopathy associated 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of skeletal muscle adaptation (ortholog); FOUND IN costamere (ortholog) 3 203183448 203276296 + 22301074 116897295 MODEL JAAIVD010000012;XM_032899030 XP_032754921 cardiomyopathy-associated protein 5 protein-coding 625935285 LOC116906106 glyceraldehyde-3-phosphate dehydrogenase-like 7 76463245 76464002 + 116906106 MODEL JAAIVD010000026 pseudo 625935286 Usp2 ubiquitin specific peptidase 2 ENCODES a protein that exhibits cyclin binding (ortholog); cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN circadian behavior (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Muscle Hypotonia (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 38629076 38657190 + 22301074;30032202 116907038 MODEL JAAIVD010000027;XM_032909984;XM_032909985;XM_032909986 XP_032765875;XP_032765876;XP_032765877 ubiquitin carboxyl-terminal hydrolase 2 protein-coding 625935309 LOC116897513 small Cajal body-specific RNA 4 3 64865190 64865317 - 116897513 MODEL JAAIVD010000012;XR_004387532 ncrna 625935312 LOC116890092 60S ribosomal protein L7-like 1 229519403 229520189 - 116890092 MODEL JAAIVD010000025 pseudo 625935313 LOC116906762 glyceraldehyde-3-phosphate dehydrogenase-like 8 8850322 8851290 + 116906762 MODEL JAAIVD010000027 pseudo 625935314 Tmem35b transmembrane protein 35B 1 31152309 31155718 - 116886980 MODEL JAAIVD010000025;XM_032888470 XP_032744361 protein-coding 625935321 LOC116890666 potassium voltage-gated channel subfamily KQT member 1-like 2 6272393 6370963 - 22301074;30032202 116890666 MODEL JAAIVD010000001;XM_032891071 XP_032746962 protein-coding 625935330 LOC116900883 olfactory receptor 5D13-like 5 69814023 69850930 - 22301074;30032202 116900883 MODEL JAAIVD010000023;XM_032902560 XP_032758451 protein-coding 625935338 LOC116910775 U6 spliceosomal RNA 9 67496139 67496246 - 116910775 MODEL JAAIVD010000002;XR_004389283 snrna 625935341 LOC116897555 small nucleolar RNA SNORA17 3 116166398 116166534 + 116897555 MODEL JAAIVD010000012;XR_004387568 snorna 625935344 Lrrc49 leucine rich repeat containing 49 INVOLVED IN cilium disassembly (ortholog); microtubule cytoskeleton organization (ortholog); microtubule polymerization (ortholog); FOUND IN centriolar satellite (ortholog) 8 54881283 54987753 - 22301074 116908189 MODEL JAAIVD010000027;XM_032911477 XP_032767368 leucine-rich repeat-containing protein 49 protein-coding 625935365 Rnf32 ring finger protein 32 FOUND IN aggresome (ortholog); cytosol (ortholog); endosome (ortholog) 6 157698664 157744299 - 22301074 116904243 MODEL JAAIVD010000024;XM_032907193;XM_032907194;XM_032907195;XM_032907196;XM_032907197;XM_032907198 XP_032763084;XP_032763085;XP_032763086;XP_032763087;XP_032763088;XP_032763089 protein-coding 625935388 Ctnna2 catenin alpha 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); brain morphogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 9 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 6 68377281 69461297 + 22301074;30032202 116903665 MODEL JAAIVD010000024;XM_032906321;XM_032906322;XM_032906323;XM_032906324 XP_032762212;XP_032762213;XP_032762214;XP_032762215 catenin alpha-2 protein-coding 625935419 Znf821 zinc finger protein 821 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 17 29425921 29443527 + 30032202 116886196 MODEL JAAIVD010000011;XM_032887574;XM_032887575;XM_032887576;XM_032887577;XM_032887578 XP_032743465;XP_032743466;XP_032743467;XP_032743468;XP_032743469 protein-coding 625935442 Celf4 CUGBP Elav-like family member 4 ENCODES a protein that exhibits mRNA binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); in utero embryonic development (ortholog); mRNA splice site recognition (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 18115625 18391795 + 30032202 116884315 MODEL JAAIVD010000010;XM_032885424;XM_032885425;XM_032885426;XM_032885427;XM_032885428;XM_032885430;XM_032885431;XM_032885432;XM_032885433;XM_032885434;XM_032885435;XM_032885436;XM_032885437;XM_032885438;XM_032885439;XM_032885440;XM_032885441;XM_032885442;XM_032885443;XM_032885444;XM_032885445;XM_032885446;XM_032885447;XM_032885448 XP_032741315;XP_032741316;XP_032741317;XP_032741318;XP_032741319;XP_032741321;XP_032741322;XP_032741323;XP_032741324;XP_032741325;XP_032741326;XP_032741327;XP_032741328;XP_032741329;XP_032741330;XP_032741331;XP_032741332;XP_032741333;XP_032741334;XP_032741335;XP_032741336;XP_032741337;XP_032741338;XP_032741339 protein-coding 625935492 Ubiad1 UbiA prenyltransferase domain containing 1 ENCODES a protein that exhibits antioxidant activity (ortholog); prenyltransferase activity (ortholog); INVOLVED IN menaquinone biosynthetic process (ortholog); menaquinone metabolic process (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Cardiac Edema (ortholog); Intracranial Hemorrhages (ortholog); Schnyder corneal dystrophy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 12326928 12338076 + 22301074;30032202 116892809 MODEL JAAIVD010000025;XM_032894690 XP_032750581 ubiA prenyltransferase domain-containing protein 1 protein-coding 625935498 Ddrgk1 DDRGK domain containing 1 ENCODES a protein that exhibits ubiquitin-like protein ligase binding (ortholog); UFM1-modified protein reader activity (ortholog); INVOLVED IN cartilage development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH genetic disease (ortholog); Spondyloepimetaphyseal Dysplasia, Shohat Type (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleolus (ortholog) 5 110395351 110405971 - 116901974 MODEL JAAIVD010000023;XM_032904220 XP_032760111 DDRGK domain-containing protein 1 protein-coding 625935511 LOC116897509 small nucleolar RNA SNORA42/SNORA80 family 3 128366192 128366332 - 116897509 MODEL JAAIVD010000012;XR_004387529 snorna 625935514 LOC116886168 ubiquitin-conjugating enzyme E2 R1-like 17 33268717 33271129 - 116886168 MODEL JAAIVD010000011 pseudo 625935515 LOC116888565 protein PRRC2C-like X 17939598 17940081 - 30032202 116888565 MODEL JAAIVD010000014;XM_032889869 XP_032745760 protein-coding 625935520 LOC116911965 phospholipid hydroperoxide glutathione peroxidase-like 11 29685796 29686451 - 116911965 MODEL JAAIVD010000006 pseudo 625935521 LOC116895371 40S ribosomal protein S23-like 3 53019444 53019882 + 116895371 MODEL JAAIVD010000012 pseudo 625935522 Spz1 spermatogenic leucine zipper 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN nucleus (ortholog) 3 203723989 203725585 + 30032202 116895690 MODEL JAAIVD010000012;XM_032896891 XP_032752782 spermatogenic leucine zipper protein 1 protein-coding 625935527 LOC116900400 olfactory receptor 4P4-like 5 70035637 70036573 - 116900400 MODEL JAAIVD010000023 pseudo 625935528 Cntrob centrobin, centriole duplication and spindle assembly protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centriole replication (ortholog); centrosome separation (ortholog); mitotic cytokinetic process (ortholog); ASSOCIATED WITH male infertility due to acephalic spermatozoa (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 48909851 48934071 - 30032202 116909788 MODEL JAAIVD010000002;XM_032913483;XM_032913484 XP_032769374;XP_032769375 centrobin protein-coding 625935554 Kcnv1 potassium voltage-gated channel modifier subfamily V member 1 ENCODES a protein that exhibits potassium channel activity (ortholog); FOUND IN intercellular bridge (ortholog); plasma membrane (ortholog) 1 219633097 219640739 + 22301074;30032202 116911269 MODEL JAAIVD010000025;XM_032915177 XP_032771068 potassium voltage-gated channel subfamily V member 1 protein-coding 625935562 C7H14orf132 chromosome 7 C14orf132 homolog 7 123114478 123146272 + 116906266 MODEL JAAIVD010000026;XM_032909156 XP_032765047 uncharacterized protein C14orf132 homolog protein-coding 625935568 LOC116889818 proteasome subunit beta type-3-like 1 239205228 239212775 - 116889818 MODEL JAAIVD010000025 pseudo 625935569 Fam221a family with sequence similarity 221 member A 6 131152263 131173559 - 116902972 MODEL JAAIVD010000024;XM_032905292 XP_032761183 protein FAM221A protein-coding 625935580 LOC116904497 60S ribosomal protein L37-like 6 157437335 157437630 + 116904497 MODEL JAAIVD010000024 pseudo 625935581 LOC116913033 U4 spliceosomal RNA 11 86043387 86043573 - 116913033 MODEL JAAIVD010000006 pseudo 625935582 LOC116895020 small nucleolar RNA SNORA17 2 82355954 82356086 + 116895020 MODEL JAAIVD010000001;XR_004387206 snorna 625935585 LOC116883412 uncharacterized LOC116883412 14 9949882 9952341 - 116883412 MODEL JAAIVD010000009;XM_032884539 XP_032740430 uncharacterized protein LOC116883412 protein-coding 625935591 LOC116902393 aldo-keto reductase family 1 member B1-like 5 155465555 155466497 + 116902393 MODEL JAAIVD010000023 pseudo 625935592 LOC116890603 small nucleolar RNA SNORA53 1 170192992 170193237 - 116890603 MODEL JAAIVD010000025;XR_004386754 snorna 625935595 Osbpl10 oxysterol binding protein like 10 ENCODES a protein that exhibits cholesterol binding (ortholog); phosphatidylserine binding (ortholog) 8 105592125 105839906 + 30032202 116907839 MODEL JAAIVD010000027;XM_032911025;XM_032911026 XP_032766916;XP_032766917 oxysterol-binding protein-related protein 10 protein-coding 625935614 LOC116909289 microfibrillar-associated protein 1-like 9 48239880 48241316 - 30032202 116909289 MODEL JAAIVD010000002;XM_032912828 XP_032768719 protein-coding 625935619 LOC116887952 selenoprotein K-like X 63781648 63782007 - 116887952 MODEL JAAIVD010000014 pseudo 625935620 LOC116893112 collagen alpha-1(I) chain-like 2 68721908 68736237 - 116893112 MODEL JAAIVD010000001;XM_032895050 XP_032750941 protein-coding 625935627 LOC116900956 glyceraldehyde-3-phosphate dehydrogenase-like 5 96272857 96282208 - 116900956 MODEL JAAIVD010000023 pseudo 625935628 Chd2 chromodomain helicase DNA binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); gene expression (ortholog); hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN nucleus (ortholog) 2 126955367 127067636 + 22301074;30032202 116891971 MODEL JAAIVD010000001;XM_032893412 XP_032749303 chromodomain-helicase-DNA-binding protein 2 protein-coding 625935671 Pou2f3 POU class 2 homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleolus (ortholog) 8 37699525 37780272 - 22301074;30032202 116906867 MODEL JAAIVD010000027;XM_032909771 XP_032765662 POU domain, class 2, transcription factor 3 protein-coding 625935688 LOC116886731 small nucleolar RNA SNORA17 17 31105370 31105498 + 116886731 MODEL JAAIVD010000011;XR_004386141 snorna 625935691 LOC116890967 pepsin A-5 2 10151310 10160308 - 22301074;30032202 116890967 MODEL JAAIVD010000001;XM_032891629 XP_032747520 protein-coding 625935703 LOC116908049 40S ribosomal protein S19-like 8 27647991 27648425 + 116908049 MODEL JAAIVD010000027 pseudo 625935704 LOC116911004 carboxyl-terminal PDZ ligand of neuronal nitric oxide synthase protein-like 10 49507934 49794661 - 30032202 116911004 MODEL JAAIVD010000005;XM_032914730;XM_032914731;XM_032914732 XP_032770621;XP_032770622;XP_032770623 uncharacterized protein C1orf226-like protein-coding 625935725 Ptgs2 prostaglandin-endoperoxide synthase 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 29593573 29601879 + 22301074;30032202 116911410 MODEL JAAIVD010000005;XM_032915374 XP_032771265 prostaglandin G/H synthase 2 protein-coding 625935739 LOC116895468 protein tyrosine phosphatase type IVA 1-like 3 85058808 85059317 + 116895468 MODEL JAAIVD010000012 pseudo 625935740 Septin11 septin 11 INVOLVED IN regulation of synapse organization (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); methylmalonic acidemia (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 11 5894014 5979781 + 22301074;30032202 116912329 MODEL JAAIVD010000006;XM_032916366;XM_032916367;XM_032916368;XM_032916370;XM_032916371;XM_032916372;XM_032916373;XR_004389446 XP_032772257;XP_032772258;XP_032772259;XP_032772261;XP_032772262;XP_032772263;XP_032772264 septin-11 protein-coding 625935769 Nr3c1 nuclear receptor subfamily 3 group C member 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); associative learning (ortholog); astrocyte differentiation (ortholog); PARTICIPATES IN cortisol signaling pathway; forkhead class A signaling pathway; prednisolone pharmacodynamics pathway; ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 5431948 5522978 + 22301074 116884713 MODEL JAAIVD010000010;XM_032885898 XP_032741789 glucocorticoid receptor protein-coding 625935782 Lemd2 LEM domain nuclear envelope protein 2 INVOLVED IN heart formation (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cataract (ortholog); cataract 46 juvenile-onset (ortholog); FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); nuclear envelope (ortholog) 18 6609294 6623419 + 30032202 116887010 MODEL JAAIVD010000013;XM_032888495 XP_032744386 LEM domain-containing protein 2 protein-coding 625935795 Lrrc4b leucine rich repeat containing 4B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); FOUND IN cerebellar mossy fiber (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 2 155069781 155103243 - 22301074;30032202 116892212 MODEL JAAIVD010000001;XM_032893771;XM_032893772 XP_032749662;XP_032749663 leucine-rich repeat-containing protein 4B protein-coding 625935807 Hesx1 HESX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); FOUND IN nucleus (ortholog) 13 2732090 2734202 + 30032202 116915057 MODEL JAAIVD010000008;XM_032919475 XP_032775366 homeobox expressed in ES cells 1 protein-coding 625935815 LOC116889263 60S ribosomal protein L35a-like X 38610498 38610907 - 116889263 MODEL JAAIVD010000014 pseudo 625935816 Dhx16 DEAH-box helicase 16 ENCODES a protein that exhibits molecular adaptor activity (ortholog); pattern recognition receptor activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 9089487 9102188 + 22301074;30032202 116887476 MODEL JAAIVD010000013;XM_032889092 XP_032744983 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 protein-coding 625935840 Map7d1 MAP7 domain containing 1 INVOLVED IN microtubule cytoskeleton organization (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); spindle (ortholog) 1 32032727 32057420 + 22301074;30032202 116896654 MODEL JAAIVD010000025;XM_032897990;XM_032897998;XM_032898009;XM_032898020;XM_032898029;XM_032898038 XP_032753881;XP_032753889;XP_032753900;XP_032753911;XP_032753920;XP_032753929 MAP7 domain-containing protein 1 protein-coding 625935871 Slc4a4 solute carrier family 4 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); sodium:bicarbonate symporter activity (ortholog); symporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); establishment of localization in cell (ortholog); metanephric proximal tubule development (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal recessive proximal renal tubular acidosis (ortholog); cataract (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytosol (ortholog) 11 2384266 2715917 + 22301074;30032202 116912197 MODEL JAAIVD010000006;XM_032916131 XP_032772022 electrogenic sodium bicarbonate cotransporter 1 protein-coding 625935902 Col6a3 collagen type VI alpha 3 chain INVOLVED IN response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy (ortholog); Bethlem myopathy (ortholog); Bethlem Myopathy 1A (ortholog); FOUND IN extracellular matrix (ortholog) 4 162773965 162853191 - 22301074 116899630 MODEL JAAIVD010000003;XM_032901603 XP_032757494 collagen alpha-3(VI) chain protein-coding 625935949 LOC116888098 nuclear receptor subfamily 5 group A member 2-like X 98078155 98092002 + 116888098 MODEL JAAIVD010000014 pseudo 625935950 Hoxa4 homeobox A4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nuclear body (ortholog) 6 88870945 88873021 + 22301074;30032202 116903806 MODEL JAAIVD010000024;XM_032906507 XP_032762398 homeobox protein Hox-A4 protein-coding 625935956 Defb130b defensin beta 130B FOUND IN cytosol (ortholog) 12 61370937 61374143 - 30032202 116913122 MODEL JAAIVD010000007;XM_032917278 XP_032773169 beta-defensin 130B protein-coding 625935961 LOC116905740 60S ribosomal protein L11-like 7 81550090 81550620 - 116905740 MODEL JAAIVD010000026 pseudo 625935962 Ctdp1 CTD phosphatase subunit 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); Tat protein binding (ortholog); TFIIF-class transcription factor complex binding (ortholog); INVOLVED IN exit from mitosis (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Congenital Cataracts, Facial Dysmorphism, and Neuropathy (ortholog); FOUND IN centrosome (ortholog); midbody (ortholog); nucleoplasm (ortholog) 15 51760106 51801640 + 22301074;30032202 116884295 MODEL JAAIVD010000010;XM_032885393 XP_032741284 RNA polymerase II subunit A C-terminal domain phosphatase protein-coding 625935977 LOC116897524 small nucleolar RNA SNORA48 3 148016842 148016989 + 116897524 MODEL JAAIVD010000012;XR_004387540 snorna 625935980 LOC116888037 fructose-bisphosphate aldolase A-like X 84546343 84549483 - 116888037 MODEL JAAIVD010000014 pseudo 625935981 Akap14 A-kinase anchoring protein 14 ENCODES a protein that exhibits protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog); sperm fibrous sheath (ortholog) X 103327503 103343473 - 30032202 116888557 MODEL JAAIVD010000014;XM_032889863 XP_032745754 A-kinase anchor protein 14 protein-coding 625935991 LOC116896105 succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial-like 3 2327571 2328329 + 116896105 MODEL JAAIVD010000012 pseudo 625935992 LOC116888876 small ubiquitin-related modifier 2-like 1 107903942 107904244 + 30032202 116888876 MODEL JAAIVD010000025;XM_032890143 XP_032746034 protein-coding 625935996 LOC116894859 U6 spliceosomal RNA 2 185869339 185869445 + 116894859 MODEL JAAIVD010000001;XR_004387073 snrna 625935999 Olfm2 olfactomedin 2 INVOLVED IN locomotory behavior (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of smooth muscle cell differentiation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 8 16934731 17010976 - 30032202 116906706 MODEL JAAIVD010000027;XM_032909510;XM_032909511 XP_032765401;XP_032765402 noelin-2 protein-coding 625936012 Defb136 defensin beta 136 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antifungal innate immune response (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH thoracic aortic aneurysm (ortholog) 12 61315623 61316667 - 22301074;30032202 116913144 MODEL JAAIVD010000007;XM_032917349 XP_032773240 beta-defensin 136 protein-coding 625936016 Znf654 zinc finger protein 654 7 109588116 109653049 + 30032202 116905340 MODEL JAAIVD010000026;XM_032908238 XP_032764129 protein-coding 625936029 Rnf183 ring finger protein 183 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); protein autoubiquitination (ortholog); protein polyubiquitination (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 91107043 91108075 + 30032202 116888409 MODEL JAAIVD010000025;XM_032889686 XP_032745577 E3 ubiquitin-protein ligase RNF183 protein-coding 625936033 LOC116905732 voltage-dependent anion-selective channel protein 1-like 7 78936034 78936978 + 116905732 MODEL JAAIVD010000026 pseudo 625936034 LOC116908325 U6 spliceosomal RNA 8 113963625 113963726 - 116908325 MODEL JAAIVD010000027;XR_004388882 snrna 625936037 LOC116912592 high mobility group protein B3-like 11 76960962 76965921 + 30032202 116912592 MODEL JAAIVD010000006;XM_032916712 XP_032772603 protein-coding 625936046 Klhl20 kelch like family member 20 ENCODES a protein that exhibits type II interferon binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); negative regulation of apoptotic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 40384454 40428780 - 22301074 116911120 MODEL JAAIVD010000005;XM_032914966;XM_032914967;XR_004389315 XP_032770857;XP_032770858 kelch-like protein 20 protein-coding 625936069 LOC116903721 CLK4-associating serine/arginine rich protein-like 6 81607522 81609114 + 116903721 MODEL JAAIVD010000024;XM_032906399;XM_032906400;XM_032906401 XP_032762290;XP_032762291;XP_032762292 uncharacterized protein LOC116903721 protein-coding 625936082 LOC116895502 eukaryotic translation initiation factor 4E-like 1 78737189 78737830 - 116895502 MODEL JAAIVD010000025 pseudo 625936083 Cdh2 cadherin 2 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); brain morphogenesis (ortholog); calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); PARTICIPATES IN cadherin mediated signaling pathway; fibroblast growth factor signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); agenesis of corpus callosum, cardiac, ocular, and genital syndrome (ortholog); Animal Disease Models (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 15 27138853 27350424 + 22301074;30032202 116884434 MODEL JAAIVD010000010;XM_032885522 XP_032741413 cadherin-2 protein-coding 625936103 Pierce2 piercer of microtubule wall 2 INVOLVED IN axoneme assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 8 67316381 67321040 - 22301074;30032202 116908290 MODEL JAAIVD010000027;XM_032911552 XP_032767443 C8H15orf65 chromosome 8 C15orf65 homolog;uncharacterized protein C15orf65 homolog protein-coding 625936109 Edaradd EDAR associated via death domain INVOLVED IN hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH ectodermal dysplasia (ortholog); ectodermal dysplasia 10A (ortholog); ectodermal dysplasia 10B (ortholog) 14 40817269 40846966 - 22301074 116883749 MODEL JAAIVD010000009;XM_032884993 XP_032740884 EDAR associated death domain;ectodysplasin-A receptor-associated adapter protein protein-coding 625936118 LOC116914997 calcium-binding mitochondrial carrier protein Aralar2-like 13 28615012 28781419 + 116914997 MODEL JAAIVD010000008 pseudo 625936119 Tmem223 transmembrane protein 223 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 9171267 9172678 - 30032202 116890930 MODEL JAAIVD010000001;XM_032891573 XP_032747464 protein-coding 625936125 LOC116904244 ribosome biogenesis protein NSA2 homolog 6 157917366 157918129 - 116904244 MODEL JAAIVD010000024 pseudo 625936126 Rad51d RAD51 paralog D ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA damage sensor activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); DNA damage response (ortholog); DNA strand invasion (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Chromosome Deletion (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 9 87625302 87644249 + 22301074;30032202 116910051 MODEL JAAIVD010000002;XM_032913848;XM_032913849;XM_032913850;XM_032913851 XP_032769739;XP_032769740;XP_032769741;XP_032769742 DNA repair protein RAD51 homolog 4 protein-coding 625936147 LOC116906430 small nucleolar RNA SNORA48 7 49933910 49934050 + 116906430 MODEL JAAIVD010000026;XR_004388691 snorna 625936150 LOC116914800 annexin A8 13 9851902 9867116 + 22301074;30032202 116914800 MODEL JAAIVD010000008;XM_032919251 XP_032775142 protein-coding 625936166 Pcsk5 proprotein convertase subtilisin/kexin type 5 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cardiac septum development (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Anorectal Malformations (ortholog); bone development disease (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) 2 17525179 17934302 - 22301074;30032202 116891013 MODEL JAAIVD010000001;XM_032891692;XM_032891693 XP_032747583;XP_032747584 protein-coding 625936211 Birc5 baculoviral IAP repeat containing 5 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell division (ortholog); cellular response to ethanol (ortholog); cellular response to stem cell factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute necrotizing pancreatitis (ortholog); acute pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); centriole (ortholog); chromosome passenger complex (ortholog) 9 66204836 66212679 - 116910161 MODEL JAAIVD010000002;XM_032914019 XP_032769910 baculoviral IAP repeat-containing protein 5 protein-coding 625936219 Med8 mediator complex subunit 8 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 1 38611917 38617588 - 22301074;30032202 116897816 MODEL JAAIVD010000025;XM_032899234 XP_032755125 mediator of RNA polymerase II transcription subunit 8 protein-coding 625936230 Pde4c phosphodiesterase 4C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; FOUND IN cilium (ortholog) 13 12988229 12992590 + 22301074;30032202 116914421 MODEL JAAIVD010000008;XM_032918691 XP_032774582 cAMP-specific 3',5'-cyclic phosphodiesterase 4C protein-coding 625936244 Ube2e3 ubiquitin conjugating enzyme E2 E3 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); protein K11-linked ubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); FOUND IN nucleus (ortholog) 5 56119013 56176540 + 30032202 116901557 MODEL JAAIVD010000023;XM_032903552;XM_032903553 XP_032759443;XP_032759444 ubiquitin-conjugating enzyme E2 E3 protein-coding 625936257 LOC116900432 olfactory receptor 4C15-like 5 70670634 70671569 - 22301074 116900432 MODEL JAAIVD010000023;XM_032902173 XP_032758064 protein-coding 625936260 Dysf dysferlin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to osmotic stress (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2B (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 6 62040315 62234970 - 22301074;30032202 116903590 MODEL JAAIVD010000024;XM_032906212;XM_032906213;XM_032906214;XM_032906215;XM_032906216;XM_032906217;XM_032906219;XM_032906220;XM_032906221;XM_032906222;XM_032906223;XM_032906224;XM_032906225;XM_032906226;XM_032906227 XP_032762103;XP_032762104;XP_032762105;XP_032762106;XP_032762107;XP_032762108;XP_032762110;XP_032762111;XP_032762112;XP_032762113;XP_032762114;XP_032762115;XP_032762116;XP_032762117;XP_032762118 protein-coding 625936339 LOC116899896 small nucleolar RNA SNORA17 4 98288896 98288977 - 116899896 MODEL JAAIVD010000003 pseudo 625936340 LOC116893080 glutamine-dependent NAD(+) synthetase-like 2 48777727 48783544 - 116893080 MODEL JAAIVD010000001 pseudo 625936341 Ghrh growth hormone releasing hormone ENCODES a protein that exhibits growth hormone-releasing hormone activity (ortholog); growth hormone-releasing hormone receptor binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); breast cancer (ortholog); FOUND IN axon terminus (ortholog); extracellular space (ortholog); perikaryon (ortholog) 5 136673159 136693103 - 22301074;30032202 116900727 MODEL JAAIVD010000023;XM_032902433;XM_032902434;XM_032902435 XP_032758324;XP_032758325;XP_032758326 somatoliberin protein-coding 625936358 LOC116899769 U6 spliceosomal RNA 4 23843814 23843914 + 116899769 MODEL JAAIVD010000003 pseudo 625936359 LOC116908925 keratin-associated protein 4-12-like 9 54463269 54463805 - 22301074;30032202 116908925 MODEL JAAIVD010000002;XM_032912383;XM_032912385 XP_032768274;XP_032768276 keratin-associated protein 4-6-like protein-coding 625936365 Acsf3 acyl-CoA synthetase family member 3 ENCODES a protein that exhibits malonyl-CoA synthetase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); malonate catabolic process (ortholog); ASSOCIATED WITH combined malonic and methylmalonic acidemia (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 17 42410203 42449632 + 30032202 116886338 MODEL JAAIVD010000011;XM_032887791;XM_032887792 XP_032743682;XP_032743683 malonate--CoA ligase ACSF3, mitochondrial protein-coding 625936382 Tmprss3 transmembrane serine protease 3 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); INVOLVED IN intracellular sodium ion homeostasis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 8 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); neuronal cell body (ortholog) 18 2680961 2700434 + 22301074;30032202 116887229 MODEL JAAIVD010000013;XM_032888791 XP_032744682 transmembrane protease serine 3 protein-coding 625936398 LOC116914140 small nucleolar RNA SNORA17 12 83240920 83241050 - 116914140 MODEL JAAIVD010000007;XR_004389699 snorna 625936401 LOC116904423 phosphoglycerate kinase 1-like 6 109596667 109598261 - 116904423 MODEL JAAIVD010000024 pseudo 625936402 LOC116908004 U8 snoRNA-decapping enzyme-like 8 96438019 96439685 - 30032202 116908004 MODEL JAAIVD010000027;XM_032911261 XP_032767152 protein-coding 625936409 Dnah9 dynein axonemal heavy chain 9 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Cardiovascular Abnormalities (ortholog); congenital heart disease (ortholog); genetic disease (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); distal portion of axoneme (ortholog) 9 45437131 45780196 - 22301074;30032202 116910516 MODEL JAAIVD010000002;XM_032914418 XP_032770309 dynein heavy chain 9, axonemal protein-coding 625936482 Nmb neuromedin B ENCODES a protein that exhibits neuromedin B receptor binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); arachidonate secretion (ortholog); Leydig cell proliferation (ortholog); ASSOCIATED WITH obesity (ortholog); Pruritus (ortholog); FOUND IN extracellular space (ortholog); neuron projection (ortholog) 2 119332376 119335224 + 22301074;30032202 116894270 MODEL JAAIVD010000001;XM_032895981;XM_032895982 XP_032751872;XP_032751873 neuromedin-B protein-coding 625936494 LOC116914321 cytochrome P450 2D10-like 1 252124838 252129322 - 22301074;30032202 116914321 MODEL JAAIVD010000025;XM_032918553 XP_032774444 protein-coding 625936507 LOC116900332 olfactory receptor 142-like 5 64568431 64569354 - 22301074 116900332 MODEL JAAIVD010000023;XM_032902088 XP_032757979 protein-coding 625936510 LOC116890372 U6 spliceosomal RNA 1 134316657 134316762 - 116890372 MODEL JAAIVD010000025;XR_004386587 snrna 625936513 Sh3rf2 SH3 domain containing ring finger 2 ENCODES a protein that exhibits phosphatase binding (ortholog); protein phosphatase 1 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 3227129 3332798 + 30032202 116884688 MODEL JAAIVD010000010;XM_032885871 XP_032741762 E3 ubiquitin-protein ligase SH3RF2 protein-coding 625936526 LOC116888865 heterogeneous nuclear ribonucleoprotein A3-like X 113486519 113487587 + 116888865 MODEL JAAIVD010000014 pseudo 625936527 LOC116896230 60S ribosomal protein L10-like 3 25356008 25356525 - 22301074;30032202 116896230 MODEL JAAIVD010000012;XM_032897292 XP_032753183 protein-coding 625936532 LOC116889060 uncharacterized LOC116889060 X 14043962 14054206 + 116889060 MODEL JAAIVD010000014;XR_004386363 ncrna 625936537 Klf4 KLF transcription factor 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to endothelin (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH Carotid Artery Injuries (ortholog); Congenital Abnormalities (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 96004619 96009625 + 30032202;37952156 116901744 MODEL JAAIVD010000025;XM_032903884 XP_032759775 Krueppel-like factor 4;Kruppel like factor 4 protein-coding 625936546 LOC116912921 U6 spliceosomal RNA 11 7153951 7154057 - 116912921 MODEL JAAIVD010000006;XR_004389494 snrna 625936549 C1H12orf42 chromosome 1 C12orf42 homolog 1 166223119 166352832 + 116911593 MODEL JAAIVD010000025;XM_032915592 XP_032771483 uncharacterized protein C12orf42 homolog protein-coding 625936557 Cnp 2'',3''-cyclic nucleotide 3'' phosphodiesterase ENCODES a protein that exhibits 2',3'-cyclic-nucleotide 3'-phosphodiesterase activity (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); forebrain development (ortholog); ASSOCIATED WITH achondroplasia (ortholog); alcoholic liver cirrhosis (ortholog); Alzheimer's disease (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 9 59876598 59883302 + 22301074;30032202 116909161 MODEL JAAIVD010000002;XM_032912648;XM_032912649;XM_032912650 XP_032768539;XP_032768540;XP_032768541 2',3'-cyclic nucleotide 3' phosphodiesterase;2',3'-cyclic-nucleotide 3'-phosphodiesterase protein-coding 625936571 Cmtm4 CKLF like MARVEL transmembrane domain containing 4 17 12636343 12680309 - 22301074 116886671 MODEL JAAIVD010000011;XM_032888163 XP_032744054 CKLF-like MARVEL transmembrane domain-containing protein 4 protein-coding 625936579 Arhgef9 Cdc42 guanine nucleotide exchange factor 9 INVOLVED IN receptor clustering (ortholog); regulation of postsynaptic specialization assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cell cortex (ortholog); cytosol (ortholog); GABA-ergic synapse (ortholog) X 53257613 53338173 + 22301074 116889388 MODEL JAAIVD010000014;XM_032890490 XP_032746381 rho guanine nucleotide exchange factor 9 protein-coding 625936593 Pten phosphatase and tensin homolog ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); beta-catenin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adult behavior (ortholog); angiogenesis (ortholog); apoptotic process (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; endometrial cancer pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN apical plasma membrane (ortholog); cell projection (ortholog); cytoplasm (ortholog) 2 32794056 32865407 + 30032202 116891096 MODEL JAAIVD010000001;XM_032891811 XP_032747702 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN protein-coding 625936605 LOC116889581 U6 spliceosomal RNA X 59518245 59518351 - 116889581 MODEL JAAIVD010000014;XR_004386497 snrna 625936608 Bmi1 BMI1 proto-oncogene, polycomb ring finger ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); Chronic Pancreatitis (ortholog); FOUND IN cytosol (ortholog); heterochromatin (ortholog); nuclear body (ortholog) 14 5349014 5363043 - 30032202 116883346 MODEL JAAIVD010000009;XM_032884423;XM_032884424;XM_032884425 XP_032740314;XP_032740315;XP_032740316 polycomb complex protein BMI-1 protein-coding 625936632 LOC116885052 small nucleolar RNA SNORA17 15 54408164 54408289 - 116885052 MODEL JAAIVD010000010;XR_004385937 snorna 625936635 LOC116889896 polycomb group RING finger protein 2-like 1 159919748 159920759 - 30032202 116889896 MODEL JAAIVD010000025;XM_032890719 XP_032746610 protein-coding 625936638 LOC116895207 forkhead box protein E1-like 3 2406628 2407655 - 116895207 MODEL JAAIVD010000012 pseudo 625936639 LOC116912433 ribonucleoside-diphosphate reductase large subunit-like 11 66576315 66578654 + 116912433 MODEL JAAIVD010000006 pseudo 625936640 LOC116901081 60S ribosomal protein L27a-like 5 145690449 145690913 + 30032202 116901081 MODEL JAAIVD010000023;XM_032902646 XP_032758537 protein-coding 625936643 Adap2 ArfGAP with dual PH domains 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial envelope (ortholog); plasma membrane (ortholog) 9 90246575 90273998 - 22301074;30032202 116910162 MODEL JAAIVD010000002;XM_032914020 XP_032769911 arf-GAP with dual PH domain-containing protein 2 protein-coding 625936658 Pms1 PMS1 homolog 1, mismatch repair system component ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN mismatch repair (ortholog); response to xenobiotic stimulus (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Colonic Polyps (ortholog); colorectal cancer (ortholog); FOUND IN nucleus (ortholog) 4 121982929 122070659 + 22301074;30032202 116899361 MODEL JAAIVD010000003;XM_032901070;XM_032901071;XM_032901072 XP_032756961;XP_032756962;XP_032756963 PMS1 protein homolog 1 protein-coding 625936681 LOC116907436 60S ribosomal protein L27-like 8 96325562 96325962 - 116907436 MODEL JAAIVD010000027 pseudo 625936682 Asic5 acid sensing ion channel subunit family member 5 ENCODES a protein that exhibits bile acid-gated sodium channel activity (ortholog); ligand-gated sodium channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN neuronal action potential (ortholog); sodium ion import across plasma membrane (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 3 71543506 71572009 - 22301074;30032202 116895446 MODEL JAAIVD010000012;XM_032896723 XP_032752614 acid-sensing ion channel 5 protein-coding 625936697 LOC116897927 olfactory receptor Olfr180-like 4 42750862 42751791 - 22301074;30032202 116897927 MODEL JAAIVD010000003;XM_032899328 XP_032755219 protein-coding 625936700 LOC116901754 twinfilin-2-like 5 91921469 91922911 - 116901754 MODEL JAAIVD010000023 pseudo 625936701 Cebpa CCAAT enhancer binding protein alpha ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Acute-Phase Reaction (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); nuclear matrix (ortholog) 2 163560712 163563479 - 30032202 116892275 MODEL JAAIVD010000001;XM_032893864 XP_032749755 CCAAT/enhancer-binding protein alpha protein-coding 625936706 LOC116912984 U1 spliceosomal RNA 11 80993598 80993745 - 116912984 MODEL JAAIVD010000006 pseudo 625936707 Snapc2 small nuclear RNA activating complex polypeptide 2 PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 16 2386180 2389382 + 22301074;30032202 116885218 MODEL JAAIVD010000004;XM_032886454 XP_032742345 snRNA-activating protein complex subunit 2 protein-coding 625936716 LOC116894117 olfactory receptor 52N4-like 2 103737202 103738167 - 22301074 116894117 MODEL JAAIVD010000001;XM_032895835 XP_032751726 protein-coding 625936719 LOC116906188 serine protease inhibitor A3N-like 7 115355260 115359578 + 116906188 MODEL JAAIVD010000026 pseudo 625936720 LOC116909969 olfactory receptor 1361-like 9 33617264 33618211 + 22301074;30032202 116909969 MODEL JAAIVD010000002;XM_032913747 XP_032769638 protein-coding 625936723 LOC116890066 ribosomal L1 domain-containing protein 1-like 1 214755895 214756866 + 116890066 MODEL JAAIVD010000025 pseudo 625936724 Vax1 ventral anterior homeobox 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN astrocyte differentiation (ortholog); axon guidance (ortholog); brain development (ortholog); ASSOCIATED WITH microphthalmia (ortholog); syndromic microphthalmia 11 (ortholog); FOUND IN nucleus (ortholog) 2 56938241 56943333 + 22301074;30032202 116893835 MODEL JAAIVD010000001;XM_032895551 XP_032751442 protein-coding 625936730 Mis12 MIS12 kinetochore complex component INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nucleus (ortholog) 9 50642360 50651294 + 22301074;30032202 116908638 MODEL JAAIVD010000002;XM_032911894;XM_032911895;XR_004389005 XP_032767785;XP_032767786 protein MIS12 homolog protein-coding 625936742 LOC116888131 SR-related and CTD-associated factor 8-like X 105786349 105794398 + 116888131 MODEL JAAIVD010000014 pseudo 625936743 LOC116910486 cytochrome c, somatic-like 9 73834578 73834931 + 116910486 MODEL JAAIVD010000002 pseudo 625936744 LOC116904444 uncharacterized LOC116904444 6 124294562 124369622 + 116904444 MODEL JAAIVD010000024 pseudo 625936745 LOC116898506 olfactory receptor 6C2-like 4 129023708 129024663 - 116898506 MODEL JAAIVD010000003 pseudo 625936746 LOC116902949 vomeronasal type-1 receptor 98 6 124065324 124066274 + 22301074;30032202 116902949 MODEL JAAIVD010000024;XM_032905275 XP_032761166 protein-coding 625936750 Angptl8 angiopoietin like 8 INVOLVED IN cell maturation (ortholog); fat cell differentiation (ortholog); glucose metabolic process (ortholog); FOUND IN extracellular region (ortholog) 8 18100024 18102072 + 30032202 116906818 MODEL JAAIVD010000027;XM_032909698;XR_004388772 XP_032765589 angiopoietin-like protein 8 protein-coding 625936760 Map2k2 mitogen-activated protein kinase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase activity (ortholog); MAP-kinase scaffold activity (ortholog); INVOLVED IN epithelial cell proliferation involved in lung morphogenesis (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast cancer (ortholog); cardiofaciocutaneous syndrome (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 153764327 153784203 - 22301074 116904575 MODEL JAAIVD010000025;XM_032907375;XM_032907381 XP_032763266;XP_032763272 dual specificity mitogen-activated protein kinase kinase 2 protein-coding 625936779 Dnaaf1 dynein axonemal assembly factor 1 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog) 17 39222766 39242143 + 22301074;30032202 116886391 MODEL JAAIVD010000011;XM_032887858 XP_032743749 dynein assembly factor 1, axonemal protein-coding 625936794 LOC116898374 60S ribosomal protein L35a-like 4 65261016 65261449 - 116898374 MODEL JAAIVD010000003 pseudo 625936795 LOC116883910 40S ribosomal protein SA-like 14 742841 743581 + 116883910 MODEL JAAIVD010000009 pseudo 625936796 LOC116888900 eukaryotic peptide chain release factor GTP-binding subunit ERF3B-like X 53754972 53757466 + 22301074;30032202 116888900 MODEL JAAIVD010000014;XM_032890159 XP_032746050 protein-coding 625936801 Klf15 KLF transcription factor 15 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cellular response to endothelin (ortholog); glial cell differentiation (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); Cardiac Fibrosis (ortholog); endomyocardial fibrosis (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 56445069 56457768 - 30032202 116903508 MODEL JAAIVD010000024;XM_032906113;XM_032906114 XP_032762004;XP_032762005 Krueppel-like factor 15;Kruppel like factor 15 protein-coding 625936813 Col23a1 collagen type XXIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Familial Prostate Cancer (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 9 33880474 34170888 + 116910514 MODEL JAAIVD010000002;XM_032914417 XP_032770308 collagen alpha-1(XXIII) chain protein-coding 625936846 LOC116900538 olfactory receptor 4K3-like 5 89602935 89608245 - 22301074 116900538 MODEL JAAIVD010000023;XM_032902264;XM_032902265 XP_032758155;XP_032758156 protein-coding 625936853 LOC116897773 histone H3.3A-like 4 7864121 7866640 + 116897773 MODEL JAAIVD010000003 pseudo 625936854 LOC116883224 serpin B6-like 14 52384685 52388507 - 30032202 116883224 MODEL JAAIVD010000009;XM_032884239 XP_032740130 protein-coding 625936860 LOC116908300 40S ribosomal protein S8-like 8 27707648 27708199 - 116908300 MODEL JAAIVD010000027 pseudo 625936861 LOC116894753 UPF0462 protein C4orf33 homolog 2 151220059 151221083 - 116894753 MODEL JAAIVD010000001 pseudo 625936862 LOC116905870 alpha-1-antitrypsin 1-6-like 7 114954555 114960720 - 30032202 116905870 MODEL JAAIVD010000026;XM_032908859 XP_032764750 protein-coding 625936872 Cnot2 CCR4-NOT transcription complex subunit 2 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cytoplasmic mRNA processing body assembly (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); Intellectual Developmental Disorder with Nasal Speech, Dysmorphic Facies, and Variable Skeletal Anomalies (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 194637396 194728411 - 22301074;30032202 116909154 MODEL JAAIVD010000025;XM_032912642;XM_032912651;XM_032912658;XM_032912664;XM_032912673 XP_032768533;XP_032768542;XP_032768549;XP_032768555;XP_032768564 protein-coding 625936901 LOC116911990 PRAME family member 20-like 11 48547173 48553429 + 22301074;30032202 116911990 MODEL JAAIVD010000006;XM_032915896 XP_032771787 protein-coding 625936908 Ngly1 N-glycanase 1 ENCODES a protein that exhibits peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity (ortholog); INVOLVED IN glycoprotein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of deglycosylation (ortholog); congenital disorder of deglycosylation 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog) 12 85622419 85673966 + 22301074;30032202 116913077 MODEL JAAIVD010000007;XM_032917209;XM_032917210 XP_032773100;XP_032773101 peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase protein-coding 625936927 Mtmr14 myotubularin related protein 14 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); congenital structural myopathy (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); ruffle (ortholog) 6 33253318 33296085 - 22301074;30032202 116903424 MODEL JAAIVD010000024;XM_032905957;XM_032905958;XM_032905959;XM_032905960;XM_032905961;XM_032905962;XM_032905963 XP_032761848;XP_032761849;XP_032761850;XP_032761851;XP_032761852;XP_032761853;XP_032761854 myotubularin-related protein 14 protein-coding 625936966 LOC116903206 uncharacterized LOC116903206 6 18716981 18721364 - 116903206 MODEL JAAIVD010000024;XR_004388259 ncrna 625936970 LOC116884137 U7 small nuclear RNA 14 40961397 40961459 + 116884137 MODEL JAAIVD010000009;XR_004385858 snrna 625936973 LOC116884075 small nucleolar RNA SNORA17 14 24837325 24837460 - 116884075 MODEL JAAIVD010000009;XR_004385821 snorna 625936976 Trim40 tripartite motif containing 40 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); negative regulation of protein catabolic process (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN IkappaB kinase complex (ortholog) 18 9852521 9862235 - 22301074;30032202 116887713 MODEL JAAIVD010000013;XM_032889312 XP_032745203 tripartite motif-containing protein 40 protein-coding 625936986 Plxnb2 plexin B2 ENCODES a protein that exhibits semaphorin receptor activity (ortholog); signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to stress (ortholog); cytoplasmic translation (ortholog); FOUND IN plasma membrane (ortholog) 1 258459406 258484980 - 22301074;30032202 116915022 MODEL JAAIVD010000025;XM_032919433 XP_032775324 plexin-B2 protein-coding 625937029 Fam149b1 family with sequence similarity 149 member B1 INVOLVED IN cilium assembly (ortholog); protein localization to cilium (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); Joubert Syndrome 36 (ortholog) 12 90144514 90182733 + 30032202 116914067 MODEL JAAIVD010000007;XM_032918370;XM_032918371;XM_032918372;XM_032918373;XM_032918374;XM_032918375 XP_032774261;XP_032774262;XP_032774263;XP_032774264;XP_032774265;XP_032774266 protein FAM149B1 protein-coding 625937064 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 39718080 39718153 + 116890652 MODEL JAAIVD010000025 trna 625937065 LOC116908094 uncharacterized LOC116908094 8 109589792 109592969 + 116908094 MODEL JAAIVD010000027;XR_004388874 ncrna 625937070 LOC116899957 cation-dependent mannose-6-phosphate receptor-like 5 39377492 39385491 + 116899957 MODEL JAAIVD010000023 pseudo 625937071 Klf17 KLF transcription factor 17 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog) 1 39246212 39251663 + 116914391 MODEL JAAIVD010000025;XM_032919019 XP_032774910 Krueppel-like factor 17;Kruppel like factor 17 protein-coding 625937075 Rhoc ras homolog family member C INVOLVED IN apical junction assembly (ortholog); mitotic cytokinesis (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH breast cancer (ortholog); Myocardial Ischemia (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); membrane (ortholog) 3 53319981 53326207 - 22301074;30032202 116896427 MODEL JAAIVD010000012;XM_032897574;XM_032897575 XP_032753465;XP_032753466 rho-related GTP-binding protein RhoC protein-coding 625937087 LOC116905435 immunoglobulin heavy variable 3-73-like 7 122425724 122426184 - 116905435 MODEL JAAIVD010000026 pseudo 625937088 LOC116897584 U1 spliceosomal RNA 3 114046339 114046494 - 116897584 MODEL JAAIVD010000012;XR_004387590 snrna 625937091 LOC116897075 cytochrome c, somatic-like 3 156828374 156829254 - 22301074;30032202 116897075 MODEL JAAIVD010000012;XM_032898701 XP_032754592 protein-coding 625937096 LOC116887414 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8522108 8524940 - 116887414 MODEL JAAIVD010000013;XR_004386211 pseudo 625937104 LOC116910152 disabled homolog 1-like 9 85650176 85653446 + 116910152 MODEL JAAIVD010000002 pseudo 625937105 LOC116893186 olfactory receptor 52N2-like 2 103833986 103837753 - 116893186 MODEL JAAIVD010000001 pseudo 625937106 Pgpep1 pyroglutamyl-peptidase I ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 13 12900955 12910978 - 22301074;30032202 116914758 MODEL JAAIVD010000008;XM_032919208;XM_032919209;XM_032919210 XP_032775099;XP_032775100;XP_032775101 pyroglutamyl-peptidase 1 protein-coding 625937121 Rps12 ribosomal protein S12 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Hypertriglyceridemia (ortholog); FOUND IN cytosol (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 2 209856443 209858643 - 22301074;30032202 116892942 MODEL JAAIVD010000001;XM_032894892 XP_032750783 40S ribosomal protein S12 protein-coding 625937131 LOC116890278 interferon-induced transmembrane protein 2-like 1 20638922 20639774 + 116890278 MODEL JAAIVD010000025 pseudo 625937132 Ssu72 SSU72 homolog, RNA polymerase II CTD phosphatase ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive osteopetrosis 4 (ortholog); liver disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 4894437 4924214 - 22301074;30032202 116891744 MODEL JAAIVD010000025;XM_032893056 XP_032748947 RNA polymerase II subunit A C-terminal domain phosphatase SSU72 protein-coding 625937141 LOC116903957 uncharacterized LOC116903957 6 28832309 28834222 + 116903957 MODEL JAAIVD010000024 pseudo 625937142 LOC116915177 U6 spliceosomal RNA 13 53047149 53047250 - 116915177 MODEL JAAIVD010000008;XR_004389836 snrna 625937145 LOC116890437 U7 small nuclear RNA 1 235307396 235307461 - 116890437 MODEL JAAIVD010000025 pseudo 625937146 LOC116909961 high mobility group protein B1-like 9 57528454 57529270 - 116909961 MODEL JAAIVD010000002;XR_004389116 pseudo 625937149 LOC116898386 uncharacterized protein C4orf46 homolog 4 72507609 72574023 + 116898386 MODEL JAAIVD010000003 pseudo 625937150 LOC116888992 proteasome subunit beta type-3-like X 12962431 12963601 - 116888992 MODEL JAAIVD010000014 pseudo 625937151 Appl2 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); cold acclimation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); early phagosome (ortholog) 1 164855509 164907613 + 22301074;30032202 116907499 MODEL JAAIVD010000025;XM_032910498 XP_032766389 DCC-interacting protein 13-beta protein-coding 625937176 Gopc golgi associated PDZ and coiled-coil motif containing ENCODES a protein that exhibits frizzled binding (ortholog); GTPase regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anion channel activity (ortholog); negative regulation of protein localization to cell surface (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); azoospermia (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 18 29586592 29609233 + 30032202 116887669 MODEL JAAIVD010000013;XM_032889264 XP_032745155 Golgi-associated PDZ and coiled-coil motif-containing protein protein-coding 625937182 LOC116894945 small nucleolar RNA Z195/SNORD33/SNORD32 family 2 154417089 154417173 + 116894945 MODEL JAAIVD010000001;XR_004387142 snorna 625937185 Gpr149 G protein-coupled receptor 149 INVOLVED IN antral ovarian follicle growth (ortholog); negative regulation of ovulation (ortholog); preantral ovarian follicle growth (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog) 3 92635923 92693292 + 22301074;30032202 116896829 MODEL JAAIVD010000012;XM_032898311 XP_032754202 probable G-protein coupled receptor 149 protein-coding 625937193 LOC116909047 protein UXT-like 9 37965887 37968885 + 116909047 MODEL JAAIVD010000002 pseudo 625937194 Msi1 musashi RNA binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); response to hormone (ortholog); ASSOCIATED WITH brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 38370700 38397229 - 22301074;30032202 116885357 MODEL JAAIVD010000004;XM_032886631 XP_032742522 RNA-binding protein Musashi homolog 1 protein-coding 625937213 LOC116902921 sorting nexin-11-like 6 113038736 113039516 - 116902921 MODEL JAAIVD010000024 pseudo 625937214 Fcsk fucose kinase ENCODES a protein that exhibits fucokinase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); GDP-L-fucose salvage (ortholog); response to dopamine (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH Congenital Disorder of Glycosylation with Defective Fucosylation (ortholog); Congenital Disorder of Glycosylation with Defective Fucosylation 2 (ortholog); Neurodevelopmental Disorders (ortholog) 17 30588202 30608100 - 22301074;30032202 116886455 MODEL JAAIVD010000011;XM_032887956 XP_032743847 L-fucose kinase protein-coding 625937242 LOC116897305 60S ribosomal protein L37-like 3 205134796 205135082 + 116897305 MODEL JAAIVD010000012 pseudo 625937243 LOC116891102 death effector domain-containing protein-like 2 33862926 33863883 + 116891102 MODEL JAAIVD010000001 pseudo 625937244 LOC116896734 uncharacterized LOC116896734 3 68797808 68800908 + 116896734 MODEL JAAIVD010000012;XR_004387364 ncrna 625937248 Ccdc134 coiled-coil domain containing 134 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); embryonic hemopoiesis (ortholog); embryonic liver development (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); Liver Neoplasms (ortholog); osteogenesis imperfecta type 22 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum lumen (ortholog) 1 251858785 251871903 + 116914203 MODEL JAAIVD010000025;XM_032918415 XP_032774306 coiled-coil domain-containing protein 134 protein-coding 625937259 Rfk riboflavin kinase ENCODES a protein that exhibits riboflavin kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); flavin adenine dinucleotide biosynthetic process (ortholog); positive regulation of NAD(P)H oxidase activity (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 2 17487915 17495341 + 22301074;30032202 116891010 MODEL JAAIVD010000001;XM_032891691 XP_032747582 protein-coding 625937267 LOC116906374 small nucleolar RNA SNORD113/SNORD114 family 7 127245217 127245291 + 116906374 MODEL JAAIVD010000026;XR_004388643 snorna 625937270 Dpcd deleted in primary ciliary dyskinesia homolog (mouse) INVOLVED IN determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); primary ciliary dyskinesia (ortholog) 2 45041956 45059320 + 116891228 MODEL JAAIVD010000001;XM_032892075;XM_032892076;XM_032892077 XP_032747966;XP_032747967;XP_032747968 protein DPCD protein-coding 625937288 Arglu1 arginine and glutamate rich 1 ENCODES a protein that exhibits pre-mRNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 13 75091126 75114549 + 30032202 116914377 MODEL JAAIVD010000008;XM_032918580;XM_032918581 XP_032774471;XP_032774472 arginine and glutamate-rich protein 1 protein-coding 625937299 LOC116907395 olfactory receptor 145-like 8 31572383 31573327 + 22301074;30032202 116907395 MODEL JAAIVD010000027;XM_032910348 XP_032766239 protein-coding 625937302 LOC116909718 uncharacterized LOC116909718 9 67395560 67397873 - 116909718 MODEL JAAIVD010000002;XR_004389092 ncrna 625937306 LOC116895051 small nucleolar RNA SNORA17 2 113592409 113592540 + 116895051 MODEL JAAIVD010000001;XR_004387234 snorna 625937309 Skor1 SKI family transcriptional corepressor 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); SMAD binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 8 57428139 57436353 - 22301074;30032202 116906852 MODEL JAAIVD010000027;XM_032909746 XP_032765637 protein-coding 625937321 Gjd3 gap junction protein delta 3 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction channel activity involved in AV node cell-bundle of His cell electrical coupling (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN AV node cell to bundle of His cell communication by electrical coupling (ortholog); cell communication involved in cardiac conduction (ortholog); gap junction assembly (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN cell surface (ortholog); connexin complex (ortholog); gap junction (ortholog) 9 55461444 55463460 + 22301074;30032202 116909799 MODEL JAAIVD010000002;XM_032913493 XP_032769384 gap junction delta-3 protein protein-coding 625937327 Isx intestine specific homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of intestinal absorption (ortholog); regulation of transcription by RNA polymerase II (ortholog); regulation of vitamin A metabolic process (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog) 17 4236452 4255812 + 22301074;30032202 116886418 MODEL JAAIVD010000011;XM_032887899;XM_032887900 XP_032743790;XP_032743791 intestine-specific homeobox protein-coding 625937338 LOC116889110 60S ribosomal protein L9-like 1 121682176 121682741 + 22301074;30032202 116889110 MODEL JAAIVD010000025;XM_032890278 XP_032746169 protein-coding 625937341 Ark2n arkadia (RNF111) N-terminal like PKA signaling regulator 2N ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of viral life cycle (ortholog); release from viral latency (ortholog); FOUND IN chromatin (ortholog) 15 54378524 54464947 + 30032202 116884586 MODEL JAAIVD010000010;XM_032885728;XM_032885729;XM_032885730 XP_032741619;XP_032741620;XP_032741621 C15H18orf25 chromosome 15 C18orf25 homolog;uncharacterized protein C18orf25 homolog protein-coding 625937354 LOC116892867 uncharacterized LOC116892867 2 195449071 195479190 - 116892867 MODEL JAAIVD010000001;XR_004386982 ncrna 625937359 LOC116888154 MICOS complex subunit Mic26-like X 113277341 113314516 + 22301074;30032202 116888154 MODEL JAAIVD010000014;XM_032889481 XP_032745372 protein-coding 625937367 LOC116888078 heat shock protein HSP 90-beta-like X 90213130 90215340 + 116888078 MODEL JAAIVD010000014 pseudo 625937368 LOC116899936 U2 spliceosomal RNA 4 145817130 145817320 + 116899936 MODEL JAAIVD010000003;XR_004387903 snrna 625937371 Epsti1 epithelial stromal interaction 1 INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); prostate cancer (ortholog) 12 46411098 46509093 - 116913780 MODEL JAAIVD010000007;XM_032918086 XP_032773977 epithelial-stromal interaction protein 1 protein-coding 625937389 LOC116896537 60S ribosomal protein L7a-like 1 31399159 31399957 - 116896537 MODEL JAAIVD010000025 pseudo 625937390 Gimap6 GTPase, IMAP family member 6 INVOLVED IN autophagy (ortholog); cell redox homeostasis (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH primary immunodeficiency disease (ortholog); FOUND IN cytosol (ortholog) 6 92262884 92269346 + 22301074;30032202 116903848 MODEL JAAIVD010000024;XM_032906580 XP_032762471 GTPase IMAP family member 6 protein-coding 625937397 LOC116912976 small nucleolar RNA SNORA17 11 74496640 74496771 - 116912976 MODEL JAAIVD010000006;XR_004389541 snorna 625937400 Arl13b ARF like GTPase 13B INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH cystic kidney disease (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); ciliary membrane (ortholog) 1 214598668 214639147 - 22301074;30032202 116910938 MODEL JAAIVD010000025;XM_032914681;XM_032914684;XR_004389290 XP_032770572;XP_032770575 ADP ribosylation factor like GTPase 13B;ADP-ribosylation factor-like protein 13B protein-coding 625937419 Ppif peptidylprolyl isomerase F ENCODES a protein that exhibits cyclosporin A binding (ortholog); peptide binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); cellular response to arsenic-containing substance (ortholog); ASSOCIATED WITH COVID-19 (ortholog); intestinal disease (ortholog); Ulcer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial permeability transition pore complex (ortholog) 13 1798959 1805378 + 22301074;30032202 116914675 MODEL JAAIVD010000008;XM_032919081 XP_032774972 peptidyl-prolyl cis-trans isomerase F, mitochondrial protein-coding 625937429 Rnaseh2c ribonuclease H2 subunit C INVOLVED IN RNA catabolic process (ortholog); ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN ribonuclease H2 complex (ortholog) 2 2083654 2085458 - 22301074;30032202 116890725 MODEL JAAIVD010000001;XM_032891179 XP_032747070 protein-coding 625937437 Txndc2 thioredoxin domain containing 2 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); sperm flagellum (ortholog) 4 175620662 175622873 - 116898289 MODEL JAAIVD010000003;XM_032899641 XP_032755532 thioredoxin domain-containing protein 2 protein-coding 625937441 LOC116890508 small nucleolar RNA SNORA48 1 191270504 191270647 - 116890508 MODEL JAAIVD010000025;XR_004386692 snorna 625937444 Nprl3 NPR3 like, GATOR1 complex subunit INVOLVED IN aorta morphogenesis (ortholog); cardiac muscle tissue development (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); familial focal epilepsy with variable foci 1 (ortholog); familial focal epilepsy with variable foci 3 (ortholog); FOUND IN GATOR1 complex (ortholog); lysosomal membrane (ortholog) 9 3612670 3650781 + 30032202 116908768 MODEL JAAIVD010000002;XM_032912132 XP_032768023 GATOR complex protein NPRL3 protein-coding 625937462 LOC116898306 ferritin light chain-like 4 32090088 32090767 - 116898306 MODEL JAAIVD010000003 pseudo 625937463 Eps8l2 EPS8 signaling adaptor L2 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 106 (ortholog); Meniere's disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); protein-containing complex (ortholog) 2 8114676 8139087 - 30032202 116890874 MODEL JAAIVD010000001;XM_032891456 XP_032747347 EPS8 like 2;epidermal growth factor receptor kinase substrate 8-like protein 2 protein-coding 625937488 Lrrc8a leucine rich repeat containing 8 VRAC subunit A ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); identical protein binding (ortholog); monoatomic anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cell volume homeostasis (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 5 (ortholog); FOUND IN cell surface (ortholog); lysosomal membrane (ortholog); membrane (ortholog) 5 5367012 5394268 - 22301074 116901188 MODEL JAAIVD010000023;XM_032902872;XM_032902873;XM_032902874;XM_032902875;XM_032902876;XM_032902877 XP_032758763;XP_032758764;XP_032758765;XP_032758766;XP_032758767;XP_032758768 volume-regulated anion channel subunit LRRC8A protein-coding 625937510 LOC116908128 sperm motility kinase 2B-like 8 13246282 13248368 - 22301074;30032202 116908128 MODEL JAAIVD010000027;XM_032911415 XP_032767306 protein-coding 625937515 LOC116906878 olfactory receptor 145 8 31493549 31494505 + 22301074;30032202 116906878 MODEL JAAIVD010000027;XM_032909790 XP_032765681 protein-coding 625937519 LOC116901009 T-complex protein 1 subunit theta-like 5 113995822 114102199 - 116901009 MODEL JAAIVD010000023 pseudo 625937520 Cpa5 carboxypeptidase A5 ENCODES a protein that exhibits peptidase activity (ortholog) 6 108929378 108947976 - 22301074;30032202 116902908 MODEL JAAIVD010000024;XM_032905233;XM_032905234 XP_032761124;XP_032761125 protein-coding 625937539 Pin1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cis-trans isomerase activity (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); microtubule polymerization (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN altered p53 signaling pathway; p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 16919829 16931022 + 22301074;30032202 116907116 MODEL JAAIVD010000027;XM_032910090 XP_032765981 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 protein-coding 625937547 Naa16 N-alpha-acetyltransferase 16, NatA auxiliary subunit ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN N-terminal protein amino acid acetylation (ortholog); negative regulation of apoptotic process (ortholog); protein stabilization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) 12 44962390 45020919 + 22301074;30032202 116913335 MODEL JAAIVD010000007;XM_032917483;XR_004389605;XR_004389606 XP_032773374 protein-coding 625937577 Taok2 TAO kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axonogenesis (ortholog); basal dendrite arborization (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) 2 75011553 75030543 + 22301074 116891499 MODEL JAAIVD010000001;XM_032892612;XM_032892613;XM_032892615;XM_032892616;XM_032892617;XR_004386841 XP_032748503;XP_032748504;XP_032748506;XP_032748507;XP_032748508 serine/threonine-protein kinase TAO2 protein-coding 625937616 Chrnb1 cholinergic receptor nicotinic beta 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); monoatomic cation transport (ortholog); muscle cell development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 2A (ortholog); congenital myasthenic syndrome 2C (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 9 49390259 49402044 - 22301074;30032202 116908973 MODEL JAAIVD010000002;XM_032912436 XP_032768327 acetylcholine receptor subunit beta protein-coding 625937631 Pabpc4 poly(A) binding protein cytoplasmic 4 ENCODES a protein that exhibits mRNA binding (ortholog); poly(A) binding (ortholog); poly(C) RNA binding (ortholog); INVOLVED IN myeloid cell development (ortholog); regulation of mRNA stability (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 1 34962187 34977933 - 30032202 116897020 MODEL JAAIVD010000025;XM_032898631;XM_032898640 XP_032754522;XP_032754531 polyadenylate-binding protein 4 protein-coding 625937654 LOC116895381 60S ribosomal protein L9-like 3 55773086 55773666 + 116895381 MODEL JAAIVD010000012 pseudo 625937655 LOC116889030 60S ribosomal protein L35-like X 18520414 18520769 - 116889030 MODEL JAAIVD010000014 pseudo 625937656 Ebf2 EBF transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); cell fate determination (ortholog) 12 57056016 57255955 - 30032202 116913391 MODEL JAAIVD010000007;XM_032917568;XM_032917569;XM_032917570;XM_032917571;XM_032917572;XM_032917573;XM_032917574 XP_032773459;XP_032773460;XP_032773461;XP_032773462;XP_032773463;XP_032773464;XP_032773465 transcription factor COE2 protein-coding 625937689 LOC116890618 U1 spliceosomal RNA 1 228782204 228782347 + 116890618 MODEL JAAIVD010000025 pseudo 625937690 Lrp2bp LRP2 binding protein 13 41869434 41886508 - 22301074 116914613 MODEL JAAIVD010000008;XM_032918976 XP_032774867 LRP2-binding protein protein-coding 625937703 Ca9 carbonic anhydrase 9 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); molecular function activator activity (ortholog); zinc ion binding (ortholog); INVOLVED IN morphogenesis of an epithelium (ortholog); response to hypoxia (ortholog); response to testosterone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Anaplasia (ortholog); breast carcinoma (ortholog); chronic myeloid leukemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 1 2983635 2989642 - 22301074;30032202 116891079 MODEL JAAIVD010000025;XM_032891794 XP_032747685 protein-coding 625937717 LOC116900840 ubiquitin-60S ribosomal protein L40-like 5 52149270 52160874 + 116900840 MODEL JAAIVD010000023;XR_004387955 pseudo 625937721 LOC116908464 U6 spliceosomal RNA 8 15098334 15098439 + 116908464 MODEL JAAIVD010000027;XR_004388982 snrna 625937724 LOC116905865 zinc finger protein 431-like 7 13545880 13547335 - 22301074 116905865 MODEL JAAIVD010000026;XM_032908852;XM_032908853 XP_032764743;XP_032764744 protein-coding 625937734 LOC116890555 U1 spliceosomal RNA 1 209701472 209701634 + 116890555 MODEL JAAIVD010000025;XR_004386729 snrna 625937737 LOC116906338 U6 spliceosomal RNA 7 68056536 68056632 + 116906338 MODEL JAAIVD010000026 pseudo 625937738 LOC116892048 uncharacterized LOC116892048 2 143586790 143589055 - 116892048 MODEL JAAIVD010000001;XR_004386907 ncrna 625937742 Tm4sf5 transmembrane 4 L six family member 5 ENCODES a protein that exhibits arginine binding (ortholog); INVOLVED IN regulation of G1/S transition of mitotic cell cycle (ortholog); FOUND IN lysosomal membrane (ortholog); plasma membrane (ortholog) 9 50119308 50125784 + 22301074;30032202 116910444 MODEL JAAIVD010000002;XM_032914295 XP_032770186 transmembrane 4 L6 family member 5 protein-coding 625937751 Col6a6 collagen type VI alpha 6 chain FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 8 96982242 97079065 - 30032202 116906925 MODEL JAAIVD010000027;XM_032909852 XP_032765743 collagen alpha-6(VI) chain protein-coding 625937790 LOC116886632 eukaryotic translation initiation factor 2 subunit 1-like 17 17525891 17529620 - 22301074;30032202 116886632 MODEL JAAIVD010000011;XM_032888137 XP_032744028 protein-coding 625937795 LOC116907348 vomeronasal type-1 receptor 4-like 8 33968736 33969591 - 116907348 MODEL JAAIVD010000027 pseudo 625937796 C13H19orf44 chromosome 13 C19orf44 homolog 13 14267258 14282807 + 116914295 MODEL JAAIVD010000008;XM_032918536;XM_032918537;XM_032918538 XP_032774427;XP_032774428;XP_032774429 uncharacterized protein C19orf44 homolog protein-coding 625937818 Anxa13 annexin A13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of Golgi to plasma membrane protein transport (ortholog); positive regulation of Golgi to plasma membrane protein transport (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); exocytic vesicle (ortholog) 1 232886347 232938569 - 22301074;30032202 116890105 MODEL JAAIVD010000025;XM_032890852 XP_032746743 protein-coding 625937833 LOC116914132 small nucleolar RNA SNORA17 12 22454611 22454740 + 116914132 MODEL JAAIVD010000007;XR_004389693 snorna 625937836 Trim21 tripartite motif containing 21 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); autophagosome assembly (ortholog); canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) 2 102493797 102507898 - 22301074 116891803 MODEL JAAIVD010000001;XM_032893159 XP_032749050 E3 ubiquitin-protein ligase TRIM21 protein-coding 625937847 Hibadh 3-hydroxyisobutyrate dehydrogenase ENCODES a protein that exhibits 3-hydroxyisobutyrate dehydrogenase activity (ortholog); INVOLVED IN L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; FOUND IN mitochondrion (ortholog) 6 88426486 88525901 + 22301074;30032202 116903787 MODEL JAAIVD010000024;XM_032906481 XP_032762372 3-hydroxyisobutyrate dehydrogenase, mitochondrial protein-coding 625937859 Ankra2 ankyrin repeat family A member 2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of protein-containing complex assembly (ortholog); FOUND IN 3M complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 198323943 198334541 - 22301074;30032202 116897259 MODEL JAAIVD010000012;XM_032898994;XM_032898995 XP_032754885;XP_032754886 ankyrin repeat family A protein 2 protein-coding 625937875 LOC116894016 olfactory receptor 52A5-like 2 101866858 101867808 + 22301074 116894016 MODEL JAAIVD010000001;XM_032895731 XP_032751622 protein-coding 625937878 Abcd4 ATP binding cassette subfamily D member 4 ENCODES a protein that exhibits ABC-type vitamin B12 transporter activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cobalamin metabolic process (ortholog); cobalamin transport (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog); peroxisome (ortholog) 7 98709268 98723467 - 22301074;30032202 116905275 MODEL JAAIVD010000026;XM_032908135 XP_032764026 ATP-binding cassette sub-family D member 4 protein-coding 625937901 Sybu syntabulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); axonal transport of mitochondrion (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN dense body (ortholog); microtubule (ortholog); mitochondrion (ortholog) 1 219167785 219238680 - 30032202 116911229 MODEL JAAIVD010000025;XM_032915132;XM_032915139;XM_032915147;XM_032915151;XM_032915159;XM_032915167 XP_032771023;XP_032771030;XP_032771038;XP_032771042;XP_032771050;XP_032771058 protein-coding 625937925 LOC116887861 interleukin-1 receptor accessory protein-like 1 X 44851212 44895571 + 22301074;30032202 116887861 MODEL JAAIVD010000014;XM_032889359 XP_032745250 protein-coding 625937933 Proz protein Z, vitamin K dependent plasma glycoprotein INVOLVED IN blood coagulation (ortholog); PARTICIPATES IN coagulation cascade pathway; ASSOCIATED WITH Behcet's disease (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog) 13 70614505 70626102 - 22301074;30032202 116914606 MODEL JAAIVD010000008;XM_032918970 XP_032774861 vitamin K-dependent protein Z protein-coding 625937945 Nars1 asparaginyl-tRNA synthetase 1 ENCODES a protein that exhibits asparagine-tRNA ligase activity (ortholog); CCR3 chemokine receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN asparaginyl-tRNA aminoacylation (ortholog); cell migration (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Developmental Disease (ortholog); Neurodevelopmental Disorder with Microcephaly, Impaired Language, and Gait Abnormalities (ortholog); Neurodevelopmental Disorder with Microcephaly, Impaired Language, Epilepsy, and Gait Abnormalities (ortholog); FOUND IN cytosol (ortholog) 15 66755464 66771394 + 22301074;30032202 116884535 MODEL JAAIVD010000010;XM_032885670;XM_032885671 XP_032741561;XP_032741562 asparagine--tRNA ligase, cytoplasmic protein-coding 625937968 LOC116913968 olfactory receptor 4E1 12 71426948 71427880 + 22301074 116913968 MODEL JAAIVD010000007;XM_032918236 XP_032774127 protein-coding 625937971 LOC116905688 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 7 52783020 52784163 - 116905688 MODEL JAAIVD010000026 pseudo 625937972 LOC116893862 olfactory receptor 226-like 2 61707929 61708867 + 22301074 116893862 MODEL JAAIVD010000001;XM_032895582 XP_032751473 protein-coding 625937975 Iqub IQ motif and ubiquitin domain containing INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); mating (ortholog); FOUND IN 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog); motile cilium (ortholog) 6 114820184 114873885 + 30032202 116904035 MODEL JAAIVD010000024;XM_032906870 XP_032762761 IQ and ubiquitin-like domain-containing protein protein-coding 625937991 LOC116900288 olfactory receptor 8K5 5 63586924 63587865 - 22301074;30032202 116900288 MODEL JAAIVD010000023;XM_032902043 XP_032757934 protein-coding 625937994 LOC116893929 eukaryotic translation initiation factor 3 subunit K-like 2 83601919 83602567 - 116893929 MODEL JAAIVD010000001 pseudo 625937995 LOC116914284 sperm motility kinase-like 13 58950682 58952607 + 22301074;30032202 116914284 MODEL JAAIVD010000008;XM_032918508;XM_032918509 XP_032774399;XP_032774400 protein-coding 625938001 Smarcd2 SWI/SNF related BAF chromatin remodeling complex subunit D2 INVOLVED IN chromatin remodeling (ortholog); nucleosome disassembly (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH genetic disease (ortholog); myeloid leukemia (ortholog); neutropenia (ortholog); FOUND IN nucleoplasm (ortholog); SWI/SNF complex (ortholog) 9 72849140 72857825 + 30032202 116908756 MODEL JAAIVD010000002;XM_032912107 XP_032767998 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2 protein-coding 625938018 LOC116908467 U6 spliceosomal RNA 8 73805264 73805369 + 116908467 MODEL JAAIVD010000027;XR_004388984 snrna 625938021 LOC116894004 olfactory receptor 51Q1-like 2 101643334 101644299 - 22301074 116894004 MODEL JAAIVD010000001;XM_032895720 XP_032751611 protein-coding 625938024 Ubr1 ubiquitin protein ligase E3 component n-recognin 1 ENCODES a protein that exhibits L-leucine binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to L-leucine (ortholog); negative regulation of TOR signaling (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); cardiovascular system disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); ubiquitin ligase complex (ortholog) 5 98983091 99094560 - 22301074;30032202 116901847 MODEL JAAIVD010000023;XM_032904035 XP_032759926 E3 ubiquitin-protein ligase UBR1 protein-coding 625938075 LOC116887443 RT1 class I histocompatibility antigen, AA alpha chain-like 18 7866083 7869482 + 116887443 MODEL JAAIVD010000013;XR_004386215 pseudo 625938083 Gnb4 G protein subunit beta 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate F (ortholog); FOUND IN cell body (ortholog); heterotrimeric G-protein complex (ortholog); synapse (ortholog) 3 122378758 122416578 + 22301074;30032202 116896963 MODEL JAAIVD010000012;XM_032898541 XP_032754432 guanine nucleotide-binding protein subunit beta-4 protein-coding 625938097 LOC116895607 60S ribosomal protein L22-like 1 3 157898116 157898564 + 116895607 MODEL JAAIVD010000012 pseudo 625938098 LOC116913073 PHD finger protein 11-like 12 64977641 64981878 + 30032202 116913073 MODEL JAAIVD010000007;XM_032917205 XP_032773096 protein-coding 625938105 LOC116913997 60S ribosomal protein L35a-like 1 251359853 251360298 - 116913997 MODEL JAAIVD010000025 pseudo 625938106 Cep135 centrosomal protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); positive regulation of establishment of protein localization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); genetic disease (ortholog); primary autosomal recessive microcephaly 8 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 11 33326842 33394874 + 116912447 MODEL JAAIVD010000006;XM_032916516 XP_032772407 centrosomal protein of 135 kDa protein-coding 625938136 Cfap90 cilia and flagella associated protein 90 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axoneme (ortholog); ciliary basal body (ortholog) 2 199918667 199947013 + 116892902 MODEL JAAIVD010000001;XM_032894821 XP_032750712 C2H5orf49 chromosome 2 C5orf49 homolog;uncharacterized protein C5orf49 homolog protein-coding 625938143 Mdc1 mediator of DNA damage checkpoint 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); histone reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication checkpoint signaling (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH breast carcinoma (ortholog); cervical cancer (ortholog); lung carcinoma (ortholog); FOUND IN chromosome (ortholog); focal adhesion (ortholog); nuclear body (ortholog) 18 9054470 9068903 + 22301074;30032202 116887470 MODEL JAAIVD010000013;XM_032889078 XP_032744969 mediator of DNA damage checkpoint protein 1 protein-coding 625938163 Zyg11b zyg-11 family member B, cell cycle regulator INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); ASSOCIATED WITH Goldenhar syndrome (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog) 1 46557910 46609551 + 22301074;30032202 116899175 MODEL JAAIVD010000025;XM_032900749 XP_032756640 protein zyg-11 homolog B protein-coding 625938181 LOC116911306 complement factor H-related protein 1-like 10 20038796 20071376 - 116911306 MODEL JAAIVD010000005;XM_032915220;XM_032915221 XP_032771111;XP_032771112 complement factor H-related protein 2-like protein-coding 625938195 Slc10a2 solute carrier family 10 member 2 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); Diabetes Complications (ortholog); intestinal disease (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus (ortholog); proteasome complex (ortholog) 13 78272879 78291925 - 30032202 116914612 MODEL JAAIVD010000008;XM_032918974 XP_032774865 ileal sodium/bile acid cotransporter protein-coding 625938205 LOC116890102 olfactory receptor 6C6 1 232510686 232511630 - 22301074;30032202 116890102 MODEL JAAIVD010000025;XM_032890849 XP_032746740 protein-coding 625938208 LOC116898208 transcription factor 19-like protein 4 139392614 139393355 + 116898208 MODEL JAAIVD010000003 pseudo 625938209 Smpdl3b sphingomyelin phosphodiesterase acid like 3B ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN membrane lipid catabolic process (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 25481200 25503967 + 22301074 116895402 MODEL JAAIVD010000025;XM_032896690 XP_032752581 acid sphingomyelinase-like phosphodiesterase 3b protein-coding 625938221 LOC116898036 uncharacterized LOC116898036 4 81823763 81829409 + 116898036 MODEL JAAIVD010000003;XM_032899428 XP_032755319 uncharacterized protein LOC116898036 protein-coding 625938227 Tctn1 tectonic family member 1 INVOLVED IN central nervous system interneuron axonogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN ciliary transition zone (ortholog); extracellular space (ortholog); membrane (ortholog) 16 31585406 31613408 + 30032202 116885428 MODEL JAAIVD010000004;XM_032886714 XP_032742605 tectonic-1 protein-coding 625938246 Foxb1 forkhead box B1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon target recognition (ortholog); cell migration in diencephalon (ortholog); epithelial cell differentiation involved in mammary gland alveolus development (ortholog); FOUND IN nucleus (ortholog) 8 64102620 64103597 - 30032202 116907375 MODEL JAAIVD010000027;XM_032910328 XP_032766219 forkhead box protein B1 protein-coding 625938249 LOC116902597 small nucleolar RNA SNORA17 5 60875829 60875958 - 116902597 MODEL JAAIVD010000023;XR_004388186 snorna 625938252 Idua alpha-L-iduronidase ENCODES a protein that exhibits L-iduronidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); bone development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); gastric ulcer (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); lysosomal lumen (ortholog); lysosome (ortholog) 11 18447896 18475544 + 22301074;30032202 116912170 MODEL JAAIVD010000006;XM_032916096;XR_004389429 XP_032771987 protein-coding 625938276 Cblif cobalamin binding intrinsic factor ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH congenital intrinsic factor deficiency (ortholog); gastric ulcer (ortholog); gastritis (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); extracellular space (ortholog) 2 11107188 11121159 - 22301074;30032202 116890982 MODEL JAAIVD010000001;XM_032891656 XP_032747547 protein-coding 625938288 LOC116902946 vomeronasal type-1 receptor 44-like 6 124002428 124003657 + 22301074;30032202 116902946 MODEL JAAIVD010000024;XM_032905271 XP_032761162 protein-coding 625938292 LOC116884386 endothelial differentiation-related factor 1-like 15 57529112 57533458 + 116884386 MODEL JAAIVD010000010 pseudo 625938293 LOC116904803 U4 spliceosomal RNA 6 73614063 73614220 - 116904803 MODEL JAAIVD010000024 pseudo 625938294 LOC116914312 macrophage migration inhibitory factor-like 13 39867353 39867806 + 116914312 MODEL JAAIVD010000008 pseudo 625938295 Akr1a1 aldo-keto reductase family 1 member A1 ENCODES a protein that exhibits aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); glucuronolactone reductase activity (ortholog); INVOLVED IN aldehyde catabolic process (ortholog); cellular detoxification of aldehyde (ortholog); D-glucuronate catabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; prostaglandin biosynthetic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); breast cancer (ortholog); Carcinogenesis (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); synapse (ortholog) 1 40276661 40293160 - 22301074;30032202 116898434 MODEL JAAIVD010000025;XM_032899708 XP_032755599 protein-coding 625938308 Htr3a 5-hydroxytryptamine receptor 3A ENCODES a protein that exhibits identical protein binding (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); serotonin binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to growth factor stimulus (ortholog); inorganic cation transmembrane transport (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cleavage furrow (ortholog); glutamatergic synapse (ortholog) 8 43389669 43401573 - 22301074;30032202;7565620 116907881 MODEL D49395;JAAIVD010000027;XM_032911070 BAA08388;XP_032766961 serotonin 5-HT3 receptor protein-coding 625938321 LOC116906394 small nucleolar RNA SNORD113/SNORD114 family 7 127214824 127214895 + 116906394 MODEL JAAIVD010000026;XR_004388662 snorna 625938324 Rpl38 ribosomal protein L38 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN 90S preribosome assembly (ortholog); axial mesoderm development (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH otitis media (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 9 74652405 74656051 - 1840484;22301074;30032202 116910028 MODEL JAAIVD010000002;X57007;XM_032913811 CAA40328;XP_032769702 60S ribosomal protein L38 protein-coding 625938333 LOC116883966 Ig kappa chain V-II region 26-10-like 14 25551858 25552700 + 116883966 MODEL JAAIVD010000009 pseudo 625938334 LOC116903641 disks large homolog 5-like 6 137224113 137239372 + 116903641 MODEL JAAIVD010000024 pseudo 625938335 Pik3ca phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adipose tissue development (ortholog); autosome genomic imprinting (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); FOUND IN intercalated disc (ortholog); lamellipodium (ortholog); phosphatidylinositol 3-kinase complex (ortholog) 3 122534305 122612749 - 22301074;30032202 116896968 MODEL JAAIVD010000012;XM_032898544 XP_032754435 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit alpha isoform protein-coding 625938360 LOC116897316 cytochrome c oxidase subunit 7C, mitochondrial ASSOCIATED WITH Alzheimer's disease (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 3 210649331 210651339 + 22301074;30032202 116897316 MODEL JAAIVD010000012;XM_032899072 XP_032754963 protein-coding 625938367 LOC116907223 60S ribosomal protein L35a-like 8 99740350 99740775 + 22301074;30032202 116907223 MODEL JAAIVD010000027;XM_032910187 XP_032766078 protein-coding 625938372 Ciao3 cytosolic iron-sulfur assembly component 3 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); intracellular oxygen homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH hereditary hemorrhagic telangiectasia (ortholog); High Myopia (ortholog); FOUND IN cytosolic [4Fe-4S] assembly targeting complex (ortholog) 9 3039241 3048122 + 30032202 116908653 MODEL JAAIVD010000002;XM_032911923 XP_032767814 protein-coding 625938387 Tmem203 transmembrane protein 203 INVOLVED IN intracellular calcium ion homeostasis (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 11925871 11926847 - 30032202 116901314 MODEL JAAIVD010000023;XM_032903125 XP_032759016 protein-coding 625938392 LOC116888143 receptor-binding cancer antigen expressed on SiSo cells-like X 109281072 109309560 - 116888143 MODEL JAAIVD010000014 pseudo 625938393 Mad2l1bp MAD2L1 binding protein INVOLVED IN deactivation of mitotic spindle assembly checkpoint (ortholog); regulation of exit from mitosis (ortholog); ASSOCIATED WITH Zellweger syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) 4 83717559 83721807 + 22301074;30032202 116899122 MODEL JAAIVD010000003;XM_032900647 XP_032756538 MAD2L1-binding protein protein-coding 625938400 Sohlh1 spermatogenesis and oogenesis specific basic helix-loop-helix 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); oogenesis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); hypogonadism (ortholog); ovarian dysgenesis 5 (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) 5 11239196 11243398 + 22301074;30032202 116900083 MODEL JAAIVD010000023;XM_032901865 XP_032757756 spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 1 protein-coding 625938411 LOC116890099 40S ribosomal protein S10-like 1 232414637 232415110 + 116890099 MODEL JAAIVD010000025 pseudo 625938412 Prdx5 peroxiredoxin 5 ENCODES a protein that exhibits antioxidant activity (ortholog); cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH alopecia areata (ortholog); brucellosis (ortholog); Chronic Hepatitis C (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 2 884170 887111 + 22301074;30032202 116894820 MODEL JAAIVD010000001;XM_032896492 XP_032752383 peroxiredoxin-5, mitochondrial protein-coding 625938422 Opcml opioid binding protein/cell adhesion molecule like INVOLVED IN negative regulation of glial cell proliferation (ortholog); positive regulation of cell size (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Ovarian Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN apical dendrite (ortholog); dendritic spine (ortholog); neuronal cell body (ortholog) 8 23654966 24759599 + 30032202 116906666 MODEL JAAIVD010000027;XM_032909449;XM_032909450;XM_032909451;XM_032909452;XM_032909453;XM_032909454 XP_032765340;XP_032765341;XP_032765342;XP_032765343;XP_032765344;XP_032765345 opioid-binding protein/cell adhesion molecule protein-coding 625938445 Shank3 SH3 and multiple ankyrin repeat domains 3 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA glutamate receptor clustering (ortholog); associative learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 37 (ortholog); FOUND IN ciliary membrane (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) 1 258806611 258867266 + 30032202 116915211 MODEL JAAIVD010000025;XM_032919588 XP_032775479 SH3 and multiple ankyrin repeat domains protein 3 protein-coding 625938470 LOC116906688 uncharacterized LOC116906688 8 40304150 40318740 + 116906688 MODEL JAAIVD010000027;XR_004388762 ncrna 625938475 LOC116908441 U2 spliceosomal RNA 8 63944119 63944289 + 116908441 MODEL JAAIVD010000027 pseudo 625938476 Aplf aprataxin and PNKP like factor ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; histone modification pathway; non-homologous end joining pathway of double-strand break repair; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 58652364 58697262 + 22301074;30032202 116903538 MODEL JAAIVD010000024;XM_032906152 XP_032762043 aprataxin and PNK-like factor protein-coding 625938490 LOC116893242 YEATS domain-containing protein 4-like 2 125775393 125792924 + 116893242 MODEL JAAIVD010000001 pseudo 625938491 Tex30 testis expressed 30 4 120153104 120161943 - 116899347 MODEL JAAIVD010000003;XM_032901038;XM_032901039;XM_032901040;XM_032901041;XM_032901042 XP_032756929;XP_032756930;XP_032756931;XP_032756932;XP_032756933 testis-expressed protein 30 protein-coding 625938509 LOC116898974 carbonyl reductase [NADPH] 1 4 51008591 51011253 - 30032202 116898974 MODEL JAAIVD010000003;XM_032900398;XM_032900399 XP_032756289;XP_032756290 protein-coding 625938521 LOC116901516 uncharacterized LOC116901516 5 50460524 50481296 + 116901516 MODEL JAAIVD010000023 pseudo 625938522 Aldh6a1 aldehyde dehydrogenase 6 family member A1 ENCODES a protein that exhibits methylmalonate-semialdehyde dehydrogenase (acylating, NAD) activity (ortholog); thiolester hydrolase activity (ortholog); INVOLVED IN beta-alanine catabolic process (ortholog); brown fat cell differentiation (ortholog); L-valine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autism spectrum disorder (ortholog); Methylmalonate Semialdehyde Dehydrogenase Deficiency (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 7 98542743 98563214 - 22301074;30032202 116905270 MODEL JAAIVD010000026;XM_032908122 XP_032764013 methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial protein-coding 625938538 Csrp3 cysteine and glycine rich protein 3 ENCODES a protein that exhibits actinin binding (ortholog); identical protein binding (ortholog); MRF binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle contraction (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 151011169 151021283 + 30032202 116894320 MODEL JAAIVD010000001;XM_032896012;XM_032896013;XM_032896014;XM_032896015 XP_032751903;XP_032751904;XP_032751905;XP_032751906 cysteine and glycine-rich protein 3 protein-coding 625938558 LOC116907792 olfactory receptor 8D1-like 8 32627963 32628889 + 22301074;30032202 116907792 MODEL JAAIVD010000027;XM_032910934 XP_032766825 protein-coding 625938561 Cbln4 cerebellin 4 precursor INVOLVED IN inhibitory synapse assembly (ortholog); protein secretion (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) 5 145958620 145965939 + 22301074 116902289 MODEL JAAIVD010000023;XM_032904724 XP_032760615 cerebellin-4 protein-coding 625938568 Spatc1 spermatogenesis and centriole associated 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 1 248595804 248619247 + 116890149 MODEL JAAIVD010000025;XM_032890884 XP_032746775 speriolin protein-coding 625938577 Msx2 msh homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of meiosis (ortholog); anterior/posterior pattern specification (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); craniosynostosis (ortholog); craniosynostosis 2 (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); transcription regulator complex (ortholog) 14 71809062 71814731 - 22301074;30032202 116883451 MODEL JAAIVD010000009;XM_032884597 XP_032740488 homeobox protein MSX-2 protein-coding 625938583 LOC116910199 schlafen family member 12-like 9 87468587 87474661 - 116910199 MODEL JAAIVD010000002;XM_032914060;XM_032914061 XP_032769951;XP_032769952 protein-coding 625938592 LOC116892068 60S ribosomal protein L31-like 2 149575117 149575532 - 116892068 MODEL JAAIVD010000001 pseudo 625938593 LOC116897470 U7 small nuclear RNA 3 208316652 208316712 + 116897470 MODEL JAAIVD010000012;XR_004387496 snrna 625938596 Trpv4 transient receptor potential cation channel subfamily V member 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); ATP export (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 5 (ortholog); Auditory Neuropathy (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 16 39303726 39328667 + 22301074;30032202 116885478 MODEL JAAIVD010000004;XM_032886767 XP_032742658 protein-coding 625938614 Dazap1 DAZ associated protein 1 ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN fibroblast proliferation (ortholog); maternal placenta development (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); male germ cell nucleus (ortholog) 1 154595528 154620913 - 22301074;30032202 116905224 MODEL JAAIVD010000025;XM_032908041;XM_032908051;XM_032908058;XM_032908066 XP_032763932;XP_032763942;XP_032763949;XP_032763957 DAZ-associated protein 1 protein-coding 625938640 LOC116907133 intercellular adhesion molecule 5 8 17294238 17301272 + 22301074;30032202 116907133 MODEL JAAIVD010000027;XM_032910108 XP_032765999 protein-coding 625938655 LOC116909771 olfactory receptor 6C3-like 1 160841476 160842426 + 22301074;30032202 116909771 MODEL JAAIVD010000025;XM_032913494 XP_032769385 protein-coding 625938658 Lat linker for activation of T cells ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); gene expression (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); IgG4-related disease (ortholog); immunodeficiency 52 (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); Golgi apparatus (ortholog) 2 75564901 75570037 + 22301074;30032202 116891530 MODEL JAAIVD010000001;XM_032892679;XR_004386843;XR_004386844 XP_032748570 linker for activation of T-cells family member 1 protein-coding 625938675 LOC116913891 transcription elongation factor A protein-like 8 12 19312897 19313226 + 116913891 MODEL JAAIVD010000007 pseudo 625938676 Zrsr2 zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2 ENCODES a protein that exhibits identical protein binding (ortholog); pre-mRNA 3'-splice site binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal complex assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chromosome 8, Trisomy (ortholog); congenital heart disease (ortholog); FOUND IN nucleolus (ortholog); U12-type spliceosomal complex (ortholog) X 24524827 24549333 - 22301074;30032202 116888477 MODEL JAAIVD010000014;XM_032889754 XP_032745645 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2 protein-coding 625938691 LOC116892794 zinc finger protein 501-like 2 186071857 186078886 + 30032202 116892794 MODEL JAAIVD010000001;XM_032894665;XM_032894666 XP_032750556;XP_032750557 zinc finger protein OZF-like protein-coding 625938701 LOC116895954 histone deacetylase 1-like 3 142078033 142107752 + 116895954 MODEL JAAIVD010000012 pseudo 625938702 Ddah2 DDAH family member 2, ADMA-independent ENCODES a protein that exhibits dimethylargininase activity (ortholog); INVOLVED IN citrulline metabolic process (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); pre-eclampsia (ortholog); FOUND IN mitochondrion (ortholog) 18 7656749 7659852 + 30032202 116887089 MODEL JAAIVD010000013;XM_032888598;XM_032888599 XP_032744489;XP_032744490 N(G),N(G)-dimethylarginine dimethylaminohydrolase 2;dimethylarginine dimethylaminohydrolase 2 protein-coding 625938716 Mmab metabolism of cobalamin associated B ENCODES a protein that exhibits cobalamin binding (ortholog); corrinoid adenosyltransferase activity (ortholog); transferase activity, transferring alkyl or aryl (other than methyl) groups (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease I (ortholog); glycogen storage disease Ia (ortholog); FOUND IN mitochondrion (ortholog) 16 39510528 39521203 + 30032202 116885741 MODEL JAAIVD010000004;XM_032887048 XP_032742939 corrinoid adenosyltransferase protein-coding 625938729 LOC116885314 60S ribosomal protein L32-like 16 31126979 31127448 + 116885314 MODEL JAAIVD010000004 pseudo 625938730 LOC116910248 mesothelin-like protein 9 3001190 3013197 + 30032202 116910248 MODEL JAAIVD010000002;XM_032914139 XP_032770030 protein-coding 625938750 Jpt1 Jupiter microtubule associated homolog 1 FOUND IN cytosol (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 9 68579242 68597099 + 30032202 116909270 MODEL JAAIVD010000002;XM_032912798 XP_032768689 protein-coding 625938759 Rita1 RBPJ interacting and tubulin associated 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); nuclear export (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 16 33215780 33218507 + 22301074;30032202 116885298 MODEL JAAIVD010000004;XM_032886547 XP_032742438 RBPJ-interacting and tubulin-associated protein 1 protein-coding 625938765 LOC116895797 oligosaccharyltransferase complex subunit OSTC-like 3 63171090 63178270 + 30032202 116895797 MODEL JAAIVD010000012;XM_032896937 XP_032752828 protein-coding 625938769 C6H2orf42 chromosome 6 C2orf42 homolog FOUND IN nucleoplasm (ortholog) 6 59834347 59862500 - 30032202 116903551 MODEL JAAIVD010000024;XM_032906164;XM_032906165;XM_032906166;XM_032906167 XP_032762055;XP_032762056;XP_032762057;XP_032762058 uncharacterized protein C2orf42 homolog protein-coding 625938791 Proca1 protein interacting with cyclin A1 ENCODES a protein that exhibits cyclin binding (ortholog) 9 92232414 92245395 - 22301074 116909951 MODEL JAAIVD010000002;XM_032913726 XP_032769617 protein PROCA1 protein-coding 625938799 LOC116888647 ubiquitin-conjugating enzyme E2 L3-like 1 98718575 98719112 - 116888647 MODEL JAAIVD010000025 pseudo 625938800 Abcg8 ATP binding cassette subfamily G member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog); plasma membrane (ortholog) 7 8208242 8224441 - 22301074;30032202 116905687 MODEL JAAIVD010000026;XM_032908672;XM_032908673 XP_032764563;XP_032764564 ATP-binding cassette sub-family G member 8 protein-coding 625938817 LOC116907267 olfactory receptor 7G2-like 8 15063338 15064312 + 116907267 MODEL JAAIVD010000027 pseudo 625938818 LOC116900949 lys-63-specific deubiquitinase BRCC36-like 5 90189575 90191325 + 22301074;30032202 116900949 MODEL JAAIVD010000023;XM_032902589 XP_032758480 protein-coding 625938823 Rbm10 RNA binding motif protein 10 ENCODES a protein that exhibits identical protein binding (ortholog); miRNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cardiac muscle cell myoblast differentiation (ortholog); mRNA stabilization (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); colorectal cancer (ortholog); congestive heart failure (ortholog); FOUND IN nuclear speck (ortholog); nucleolus (ortholog); nucleus (ortholog) X 3193431 3225618 - 22301074;30032202 116888315 MODEL JAAIVD010000014;XM_032889588 XP_032745479 RNA-binding protein 10 protein-coding 625938851 LOC116901415 28S ribosomal protein S21, mitochondrial-like 5 32585469 32585746 - 116901415 MODEL JAAIVD010000023 pseudo 625938852 LOC116895105 U2 spliceosomal RNA 2 9211013 9211212 - 116895105 MODEL JAAIVD010000001;XR_004387262 snrna 625938855 LOC116903640 protein LLP homolog 6 132481034 132486109 - 116903640 MODEL JAAIVD010000024 pseudo 625938856 LOC116897076 uncharacterized LOC116897076 3 157166985 157193767 - 116897076 MODEL JAAIVD010000012;XR_004387394 ncrna 625938861 Hdac9 histone deacetylase 9 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH atherosclerosis (ortholog); Auriculocondylar Syndrome 4 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleus (ortholog) 7 47379423 48136354 - 22301074;30032202 116904968 MODEL JAAIVD010000026;XM_032907639;XM_032907640;XM_032907641;XM_032907643;XM_032907644;XM_032907645;XM_032907646;XM_032907647 XP_032763530;XP_032763531;XP_032763532;XP_032763534;XP_032763535;XP_032763536;XP_032763537;XP_032763538 protein-coding 625938906 LOC116884098 small nucleolar RNA U13 14 62323045 62323147 + 116884098 MODEL JAAIVD010000009;XR_004385837 snorna 625938909 Pomgnt1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); congenital muscular dystrophy (ortholog); congenital muscular dystrophy-dystroglycanopathy type A3 (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) 1 39833765 39843335 + 30032202 116898253 MODEL JAAIVD010000025;XM_032899607;XM_032899614 XP_032755498;XP_032755505 protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1 protein-coding 625938938 Trim31 tripartite motif containing 31 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN mitochondrion (ortholog) 18 9871281 9881870 + 22301074;30032202 116887718 MODEL JAAIVD010000013;XM_032889316 XP_032745207 E3 ubiquitin-protein ligase TRIM31 protein-coding 625938950 Slc22a15 solute carrier family 22 member 15 ENCODES a protein that exhibits amino-acid betaine transmembrane transporter activity (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 3 56146523 56212625 + 22301074 116896458 MODEL JAAIVD010000012;XM_032897618 XP_032753509 protein-coding 625938966 LOC116907604 60S ribosomal protein L35a-like 1 165554347 165554695 + 22301074;30032202 116907604 MODEL JAAIVD010000025;XM_032910659 XP_032766550 protein-coding 625938970 Spast spastin ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axonal transport of mitochondrion (ortholog); cytokinetic process (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 7 18860333 18911276 - 22301074;30032202 116905936 MODEL JAAIVD010000026;XM_032908925;XM_032908926;XM_032908927;XM_032908928 XP_032764816;XP_032764817;XP_032764818;XP_032764819 protein-coding 625939000 LOC116914943 ral guanine nucleotide dissociation stimulator-like 13 11544228 11545979 - 116914943 MODEL JAAIVD010000008;XM_032919366 XP_032775257 protein-coding 625939005 LOC116907729 olfactory receptor 867-like 8 16050272 16051268 - 22301074;30032202 116907729 MODEL JAAIVD010000027;XM_032910854 XP_032766745 protein-coding 625939008 Naa15 N-alpha-acetyltransferase 15, NatA auxiliary subunit ENCODES a protein that exhibits acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); ribosome binding (ortholog); INVOLVED IN N-terminal protein amino acid acetylation (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 50 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatA complex (ortholog) 3 102980383 103042076 - 22301074;30032202 116896890 MODEL JAAIVD010000012;XM_032898436 XP_032754327 protein-coding 625939032 LOC116886424 zinc finger protein ZFPM1-like 17 41913630 41939292 + 116886424 MODEL JAAIVD010000011;XM_032887910 XP_032743801 protein-coding 625939039 LOC116888850 olfactory receptor 6C2-like 1 232626510 232631612 - 116888850 MODEL JAAIVD010000025 pseudo 625939040 Tmem216 transmembrane protein 216 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN ciliary transition zone (ortholog); cilium (ortholog); MKS complex (ortholog) 2 10027768 10033083 - 30032202 116890959 MODEL JAAIVD010000001;XM_032891617;XM_032891618 XP_032747508;XP_032747509 protein-coding 625939052 LOC116899974 activator of basal transcription 1-like 5 130620280 130621078 - 116899974 MODEL JAAIVD010000023 pseudo 625939053 LOC116893278 polyribonucleotide 5'-hydroxyl-kinase Clp1-like 2 145325463 145326569 - 116893278 MODEL JAAIVD010000001 pseudo 625939054 LOC116913423 uncharacterized LOC116913423 12 9336396 9388173 - 116913423 MODEL JAAIVD010000007;XR_004389615 ncrna 625939058 Auh AU RNA binding methylglutaconyl-CoA hydratase ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); methylglutaconyl-CoA hydratase activity (ortholog); mRNA 3'-UTR binding (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 1 (ortholog); genetic disease (ortholog); renal tubular transport disease (ortholog); FOUND IN mitochondrion (ortholog) 14 71147090 71241264 - 30032202 116883339 MODEL JAAIVD010000009;XM_032884411;XM_032884412 XP_032740302;XP_032740303 methylglutaconyl-CoA hydratase, mitochondrial protein-coding 625939075 Ctnnbip1 catenin beta interacting protein 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); transcription coactivator binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); FOUND IN beta-catenin destruction complex (ortholog); beta-catenin-ICAT complex (ortholog); cytoplasm (ortholog) 1 11205202 11232014 - 22301074;30032202 116892599 MODEL JAAIVD010000025;XM_032894384 XP_032750275 beta-catenin-interacting protein 1 protein-coding 625939083 LOC116906449 small nucleolar RNA SNORA17 7 96905983 96906105 - 116906449 MODEL JAAIVD010000026 pseudo 625939084 LOC116892984 tubulin beta-4B chain-like 2 217489401 217490956 + 116892984 MODEL JAAIVD010000001 pseudo 625939085 Ca6 carbonic anhydrase 6 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 1 10554298 10572504 + 22301074;30032202 116886147 MODEL JAAIVD010000025;XM_032887507 XP_032743398 protein-coding 625939096 Stpg4 sperm-tail PG-rich repeat containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); INVOLVED IN epigenetic programing of male pronucleus (ortholog); pyrimidine-containing compound catabolic process (ortholog); FOUND IN cytoplasm (ortholog); female germ cell nucleus (ortholog); female pronucleus (ortholog) 7 5549417 5583559 + 30032202 116905748 MODEL JAAIVD010000026;XM_032908717 XP_032764608 protein STPG4 protein-coding 625939107 LOC116910961 magnesium transporter MRS2 homolog, mitochondrial-like 1 38047766 38049080 + 116910961 MODEL JAAIVD010000025 pseudo 625939108 Shisal2b shisa like 2B 3 192497542 192513382 + 116895664 MODEL JAAIVD010000012;XM_032896871 XP_032752762 protein shisa-like-2B protein-coding 625939115 LOC116900963 olfactory receptor 6C1-like 5 102141706 102142665 - 116900963 MODEL JAAIVD010000023 pseudo 625939116 LOC116889323 protein transport protein Sec61 subunit gamma-like X 99110167 99110373 + 116889323 MODEL JAAIVD010000014 pseudo 625939117 Stmn3 stathmin 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to nerve growth factor stimulus (ortholog); cytoplasmic microtubule organization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 5 158403151 158411453 - 22301074;30032202 116902435 MODEL JAAIVD010000023;XM_032904971 XP_032760862 stathmin-3 protein-coding 625939126 LOC116895099 small nucleolar RNA U109 2 126506219 126506350 + 116895099 MODEL JAAIVD010000001;XR_004387260 snorna 625939129 LOC116912999 small nucleolar RNA SNORA17 11 91853616 91853722 - 116912999 MODEL JAAIVD010000006 pseudo 625939130 Ldlrap1 low density lipoprotein receptor adaptor protein 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to cytokine stimulus (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog); FOUND IN axon (ortholog); basal plasma membrane (ortholog); cytoplasm (ortholog) 1 23487123 23508185 + 30032202 116894661 MODEL JAAIVD010000025;XM_032896367 XP_032752258 low density lipoprotein receptor adapter protein 1 protein-coding 625939143 Eif1ad eukaryotic translation initiation factor 1A domain containing ASSOCIATED WITH melanoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 2303564 2307570 - 22301074;30032202 116890723 MODEL JAAIVD010000001;XM_032891177 XP_032747068 probable RNA-binding protein EIF1AD protein-coding 625939153 LOC116909661 uncharacterized LOC116909661 9 80146891 80149671 - 116909661 MODEL JAAIVD010000002;XR_004389088 ncrna 625939157 Psmd4 proteasome 26S subunit ubiquitin receptor, non-ATPase 4 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) 3 62207553 62216598 + 30032202 116896571 MODEL JAAIVD010000012;XM_032897782;XM_032897783 XP_032753673;XP_032753674 26S proteasome non-ATPase regulatory subunit 4;proteasome 26S subunit, non-ATPase 4 protein-coding 625939172 Mark2 microtubule affinity regulating kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN axon development (ortholog); establishment of cell polarity (ortholog); establishment or maintenance of cell polarity regulating cell shape (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN actin filament (ortholog); basal cortex (ortholog); cytoplasm (ortholog) 2 452083 517501 + 22301074;30032202 116894796 MODEL JAAIVD010000001;XM_032896448;XM_032896449;XM_032896450;XM_032896451;XM_032896452;XM_032896453;XM_032896454;XM_032896455;XM_032896457 XP_032752339;XP_032752340;XP_032752341;XP_032752342;XP_032752343;XP_032752344;XP_032752345;XP_032752346;XP_032752348 serine/threonine-protein kinase MARK2 protein-coding 625939215 LOC116910007 CMRF-35-like molecule 4 9 69248466 69252923 + 30032202 116910007 MODEL JAAIVD010000002;XM_032913793 XP_032769684 protein-coding 625939222 LOC116903277 uncharacterized LOC116903277 6 23058168 23080210 - 116903277 MODEL JAAIVD010000024;XR_004388265 ncrna 625939227 Plscr5 phospholipid scramblase family member 5 8 83879196 83895748 + 22301074;30032202 116908235 MODEL JAAIVD010000027;XM_032911496 XP_032767387 protein-coding 625939238 Sema6d semaphorin 6D ENCODES a protein that exhibits receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of smooth muscle cell migration (ortholog); positive regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); substance-related disorder (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 5 102942545 102999495 + 30032202 116901898 MODEL JAAIVD010000023;XM_032904107;XM_032904108 XP_032759998;XP_032759999 semaphorin-6D protein-coding 625939265 LOC116904178 ADP-ribosylation factor 1-like 6 151030528 151031385 - 22301074;30032202 116904178 MODEL JAAIVD010000024;XM_032907087 XP_032762978 protein-coding 625939270 LOC116908968 keratin-associated protein 9-7-like 9 54632676 54633218 + 22301074 116908968 MODEL JAAIVD010000002;XM_032912430 XP_032768321 protein-coding 625939273 LOC116903222 sentrin-specific protease 2-like 6 19621573 19622995 + 116903222 MODEL JAAIVD010000024 pseudo 625939274 Gpatch1 G-patch domain containing 1 FOUND IN catalytic step 2 spliceosome (ortholog) 2 163351249 163399794 + 22301074;30032202 116892269 MODEL JAAIVD010000001;XM_032893858 XP_032749749 G patch domain-containing protein 1 protein-coding 625939298 LOC116890226 transcription factor BTF3-like 1 270221872 270222401 + 116890226 MODEL JAAIVD010000025 pseudo 625939299 LOC116887691 thioredoxin-like protein 4A 18 23996735 23997193 + 22301074;30032202 116887691 MODEL JAAIVD010000013;XM_032889287 XP_032745178 protein-coding 625939303 LOC116885238 39S ribosomal protein L23, mitochondrial-like 16 27381013 27381443 + 116885238 MODEL JAAIVD010000004 pseudo 625939304 Ccdc172 coiled-coil domain containing 172 ASSOCIATED WITH Meckel syndrome (ortholog); FOUND IN cytoplasm (ortholog); sperm midpiece (ortholog) 2 57545958 57609842 - 30032202 116893840 MODEL JAAIVD010000001;XM_032895558;XM_032895559;XM_032895560 XP_032751449;XP_032751450;XP_032751451 coiled-coil domain-containing protein 172 protein-coding 625939326 LOC116886971 histone deacetylase 1-like 18 37933235 37934803 + 116886971 MODEL JAAIVD010000013 pseudo 625939327 LOC116887288 60S ribosomal protein L31-like 18 42580278 42580840 - 22301074;30032202 116887288 MODEL JAAIVD010000013;XM_032888867 XP_032744758 protein-coding 625939333 Epb41l5 erythrocyte membrane protein band 4.1 like 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); apical constriction (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); focal adhesion (ortholog) 10 12136548 12227132 - 22301074 116910853 MODEL JAAIVD010000005;XM_032914610;XM_032914611;XM_032914612 XP_032770501;XP_032770502;XP_032770503 band 4.1-like protein 5 protein-coding 625939368 Klhl24 kelch like family member 24 INVOLVED IN intermediate filament organization (ortholog); protein autoubiquitination (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); epidermolysis bullosa simplex generalized type (ortholog); Generalized Epidermolysis Bullosa Simplex 1B (ortholog); FOUND IN adherens junction (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 4 4900156 4930071 + 22301074 116898685 MODEL JAAIVD010000003;XM_032899943 XP_032755834 kelch-like protein 24 protein-coding 625939380 LOC116888073 RPA-related protein RADX-like X 89815534 89944165 + 22301074;30032202 116888073 MODEL JAAIVD010000014;XM_032889451 XP_032745342 protein-coding 625939393 Allc allantoicase 7 41994821 42024370 - 22301074;30032202 116905652 MODEL JAAIVD010000026;XM_032908625 XP_032764516 probable allantoicase protein-coding 625939408 LOC116889847 T-complex protein 1 subunit zeta-like 1 151409034 151410666 - 116889847 MODEL JAAIVD010000025 pseudo 625939409 LOC116888551 ubiquitin-conjugating enzyme E2 G1-like 1 42273815 42274333 - 116888551 MODEL JAAIVD010000025 pseudo 625939410 Arhgap35 Rho GTPase activating protein 35 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); GTPase activator activity (ortholog); phospholipid binding (ortholog); INVOLVED IN axon guidance (ortholog); axonal fasciculation (ortholog); camera-type eye development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Anophthalmia (ortholog); lung adenocarcinoma (ortholog); Martsolf syndrome 1 (ortholog); FOUND IN actin cytoskeleton (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 2 172447176 172570335 + 22301074 116892594 MODEL JAAIVD010000001;XM_032894374 XP_032750265 rho GTPase-activating protein 35 protein-coding 625939421 LOC116887302 eukaryotic translation initiation factor 3 subunit I-like 18 3096155 3097100 - 116887302 MODEL JAAIVD010000013 pseudo 625939422 LOC116899847 small nucleolar RNA SNORA17 4 175011384 175011515 - 116899847 MODEL JAAIVD010000003;XR_004387843 snorna 625939425 Acsl1 acyl-CoA synthetase long chain family member 1 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid biosynthetic process (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cardiomyopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) 13 41382668 41448782 - 30032202 116914233 MODEL JAAIVD010000008;XM_032918427 XP_032774318 long-chain-fatty-acid--CoA ligase 1 protein-coding 625939450 LOC116907766 olfactory receptor 10G4-like 8 82819004 82819936 - 22301074 116907766 MODEL JAAIVD010000027;XM_032910905 XP_032766796 protein-coding 625939453 Fn3krp fructosamine 3 kinase related protein 9 62602129 62610850 - 116909706 MODEL JAAIVD010000002;XM_032913376 XP_032769267 ketosamine-3-kinase protein-coding 625939463 C2cd4a C2 calcium dependent domain containing 4A INVOLVED IN positive regulation of acute inflammatory response (ortholog); regulation of cell adhesion (ortholog); regulation of vascular permeability involved in acute inflammatory response (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 62199237 62201083 - 116907986 MODEL JAAIVD010000027;XM_032911230 XP_032767121 C2 calcium-dependent domain-containing protein 4A protein-coding 625939469 LOC116913468 SNRPN upstream reading frame protein-like 12 27876432 27876634 - 116913468 MODEL JAAIVD010000007 pseudo 625939470 LOC116893477 cytochrome c oxidase assembly protein COX14-like 2 180648360 180648565 - 30032202 116893477 MODEL JAAIVD010000001;XM_032895233 XP_032751124 protein-coding 625939473 Dnah1 dynein axonemal heavy chain 1 INVOLVED IN cilium movement involved in cell motility (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Kartagener syndrome (ortholog); oligospermia (ortholog); FOUND IN axoneme (ortholog); inner dynein arm (ortholog); sperm flagellum (ortholog) 13 6963505 7024152 - 22301074;30032202 116914241 MODEL JAAIVD010000008;XM_032918449 XP_032774340 dynein heavy chain 1, axonemal protein-coding 625939555 Kyat1 kynurenine aminotransferase 1 ENCODES a protein that exhibits cysteine-S-conjugate beta-lyase activity (ortholog); glutamine-phenylpyruvate transaminase activity (ortholog); kynurenine-oxoglutarate transaminase activity (ortholog); INVOLVED IN kynurenine metabolic process (ortholog); L-kynurenine catabolic process (ortholog); pyruvate catabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH carcinoma (ortholog); Experimental Arthritis (ortholog); Kidney Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 5 5413515 5440008 + 22301074;30032202 116901191 MODEL JAAIVD010000023;XM_032902883 XP_032758774 kynurenine--oxoglutarate transaminase 1 protein-coding 625939572 Fbxo31 F-box protein 31 ENCODES a protein that exhibits cyclin binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular response to oxidative stress (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 45 (ortholog); congenital nongoitrous hypothyroidism 2 (ortholog); spastic cerebral palsy (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 17 41216412 41243879 - 22301074 116886227 MODEL JAAIVD010000011;XM_032887619 XP_032743510 F-box only protein 31 protein-coding 625939585 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 142162708 142162779 + 116902678 MODEL JAAIVD010000023 trna 625939586 Pak2 p21 (RAC1) activated kinase 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); bicellular tight junction assembly (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 16846603 16907483 - 22301074;30032202 116898764 MODEL JAAIVD010000003;XM_032900093;XM_032900094;XM_032900096 XP_032755984;XP_032755985;XP_032755987 serine/threonine-protein kinase PAK 2 protein-coding 625939612 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 34013881 34013953 - 116913058 MODEL JAAIVD010000006 trna 625939613 LOC116910500 CMRF35-like molecule 7 9 69281149 69291031 + 30032202 116910500 MODEL JAAIVD010000002;XM_032914394;XM_032914395;XM_032914396 XP_032770285;XP_032770286;XP_032770287 protein-coding 625939629 LOC116892815 uncharacterized LOC116892815 2 187993615 188005403 - 116892815 MODEL JAAIVD010000001;XR_004386972 ncrna 625939633 LOC116884086 small nucleolar RNA SNORA17 14 55706152 55706277 + 116884086 MODEL JAAIVD010000009;XR_004385829 snorna 625939636 LOC116911999 DNA (cytosine-5)-methyltransferase 3A-like 11 50146762 50148902 + 116911999 MODEL JAAIVD010000006 pseudo 625939637 Gmfb glia maturation factor beta INVOLVED IN learning (ortholog); locomotory behavior (ortholog) 12 76235160 76248845 + 22301074;30032202 116913350 MODEL JAAIVD010000007;XM_032917505;XM_032917506 XP_032773396;XP_032773397 protein-coding 625939650 Egfl8 EGF like domain multiple 8 INVOLVED IN in utero embryonic development (ortholog) 18 7295750 7298105 - 22301074;30032202 116886830 MODEL JAAIVD010000013;XM_032888269;XM_032888270 XP_032744160;XP_032744161 epidermal growth factor-like protein 8 protein-coding 625939665 LOC116909753 olfactory receptor 4D2-like 9 82901205 82902140 + 22301074 116909753 MODEL JAAIVD010000002;XM_032913439 XP_032769330 protein-coding 625939668 LOC116889710 protein translocase subunit SecA-like 22301074;30032202 116889710 MODEL JAAIVD010000059;XM_032890591 XP_032746482 protein-coding 625939669 Ydjc YdjC chitooligosaccharide deacetylase homolog 4 2432535 2441398 + 22301074;30032202 116898629 MODEL JAAIVD010000003;XM_032899843;XM_032899844;XM_032899845;XM_032899846;XM_032899847;XM_032899848 XP_032755734;XP_032755735;XP_032755736;XP_032755737;XP_032755738;XP_032755739 carbohydrate deacetylase protein-coding 625939701 Art1 ADP-ribosyltransferase 1 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) 2 100406873 100411340 + 22301074;30032202 116893971 MODEL JAAIVD010000001;XM_032895689 XP_032751580 GPI-linked NAD(P)(+)--arginine ADP-ribosyltransferase 1 protein-coding 625939709 LOC116894981 small nucleolar RNA SNORA2/SNORA34 family 2 146200308 146200443 - 116894981 MODEL JAAIVD010000001;XR_004387172 snorna 625939712 Cdon cell adhesion associated, oncogene regulated ENCODES a protein that exhibits coreceptor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell adhesion (ortholog); cell fate specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH coloboma (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog) 8 30961969 31048020 + 22301074;30032202 116906596 MODEL JAAIVD010000027;XM_032909338 XP_032765229 cell adhesion molecule-related/down-regulated by oncogenes protein-coding 625939736 LOC116894944 small nucleolar RNA SNORD116 2 140035855 140035944 + 116894944 MODEL JAAIVD010000001;XR_004387141 snorna 625939739 Htr2c 5-hydroxytryptamine receptor 2C ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); bipolar disorder (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); G protein-coupled serotonin receptor complex (ortholog) X 98050130 98051315 + 22301074;30032202 116888854 MODEL JAAIVD010000014;XM_032890123 XP_032746014 protein-coding 625939743 Fmod fibromodulin INVOLVED IN odontogenesis of dentin-containing tooth (ortholog); skin development (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); gingivitis (ortholog); periodontitis (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 10 1640845 1652315 - 22301074;30032202 116911483 MODEL JAAIVD010000005;XM_032915465 XP_032771356 protein-coding 625939750 LOC116913223 immunoglobulin kappa light chain-like 12 71298397 71308710 - 116913223 MODEL JAAIVD010000007;XM_032917398 XP_032773289 protein-coding 625939755 Prss27 serine protease 27 FOUND IN plasma membrane (ortholog) 9 1333094 1340440 + 22301074 116909744 MODEL JAAIVD010000002;XM_032913423 XP_032769314 protein-coding 625939765 Whrn whirlin ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cerebellar Purkinje cell layer formation (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 31 (ortholog); FOUND IN actin filament (ortholog); apical dendrite (ortholog); axon collateral (ortholog) 1 90089102 90172093 + 22301074;30032202 116901261 MODEL JAAIVD010000025;XM_032903020;XM_032903028;XM_032903037;XM_032903045;XM_032903054 XP_032758911;XP_032758919;XP_032758928;XP_032758936;XP_032758945 protein-coding 625939790 Mad2l2 mitotic arrest deficient 2 like 2 ENCODES a protein that exhibits JUN kinase binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN actin filament organization (ortholog); DNA damage response, signal transduction resulting in transcription (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Fanconi anemia complementation group V (ortholog); oligospermia (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 12635583 12648863 - 30032202 116892868 MODEL JAAIVD010000025;XM_032894773 XP_032750664 mitotic spindle assembly checkpoint protein MAD2B protein-coding 625939805 LOC116907383 uncharacterized LOC116907383 8 34642530 34655937 + 116907383 MODEL JAAIVD010000027;XR_004388821;XR_004388822 ncrna 625939815 LOC116888321 cytochrome c oxidase subunit 7B, mitochondrial INVOLVED IN central nervous system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); linear skin defects with multiple congenital anomalies 1 (ortholog); linear skin defects with multiple congenital anomalies 2 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) X 65568803 65574775 + 22301074;30032202 116888321 MODEL JAAIVD010000014;XM_032889594 XP_032745485 protein-coding 625939822 Kcnd1 potassium voltage-gated channel subfamily D member 1 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); PARTICIPATES IN excitatory synaptic transmission pathway; long term potentiation; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN neuronal cell body (ortholog); voltage-gated potassium channel complex (ortholog) X 14297063 14309966 - 22301074;30032202 116889123 MODEL JAAIVD010000014;XM_032890295 XP_032746186 protein-coding 625939832 LOC116899511 sterol 26-hydroxylase, mitochondrial ENCODES a protein that exhibits cholestanetetraol 26-dehydrogenase activity (ortholog); cholesterol 26-hydroxylase activity (ortholog); heme binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); calcitriol biosynthetic process from calciol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); cerebrotendinous xanthomatosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 4 148129007 148157627 + 22301074;30032202 116899511 MODEL JAAIVD010000003;XM_032901366;XM_032901367;XR_004387731 XP_032757257;XP_032757258 protein-coding 625939850 Tbc1d22b TBC1 domain family member 22B ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog) 18 4260152 4312585 - 30032202 116887042 MODEL JAAIVD010000013;XM_032888534 XP_032744425 protein-coding 625939867 Crybg1 crystallin beta-gamma domain containing 1 ASSOCIATED WITH Disease Progression (ortholog); melanoma (ortholog) 18 43645888 43697826 - 116887052 MODEL JAAIVD010000013;XM_032888543 XP_032744434 beta/gamma crystallin domain-containing protein 1 protein-coding 625939891 Smco1 single-pass membrane protein with coiled-coil domains 1 4 17090752 17093358 + 116897854 MODEL JAAIVD010000003;XM_032899262 XP_032755153 single-pass membrane and coiled-coil domain-containing protein 1 protein-coding 625939896 LOC116903607 ferritin heavy chain-like 6 100140305 100141797 + 116903607 MODEL JAAIVD010000024 pseudo 625939897 LOC116885371 glyceraldehyde-3-phosphate dehydrogenase-like 1 43194313 43246541 - 116885371 MODEL JAAIVD010000025 pseudo 625939898 LOC116906178 prohibitin-like 7 108564078 108564931 + 116906178 MODEL JAAIVD010000026 pseudo 625939899 LOC116906482 small Cajal body-specific RNA 3 7 94472417 94472555 - 116906482 MODEL JAAIVD010000026;XR_004388725 ncrna 625939902 Gpatch2l G-patch domain containing 2 like 7 100332884 100375259 + 116905306 MODEL JAAIVD010000026;XM_032908190 XP_032764081 G patch domain-containing protein 2-like protein-coding 625939916 Irf9 interferon regulatory factor 9 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH acute pancreatitis (ortholog); Experimental Colitis (ortholog); familial hyperlipidemia (ortholog); FOUND IN cytosol (ortholog); ISGF3 complex (ortholog) 12 69396592 69403040 - 22301074;30032202 116913312 MODEL JAAIVD010000007;XM_032917451;XM_032917452;XM_032917453;XM_032917455 XP_032773342;XP_032773343;XP_032773344;XP_032773346 protein-coding 625939938 Bcl7a BAF chromatin remodeling complex subunit BCL7A INVOLVED IN motor behavior (ortholog); neuron projection arborization (ortholog); FOUND IN SWI/SNF complex (ortholog) 16 30473164 30505789 - 116885455 MODEL JAAIVD010000004;XM_032886739 XP_032742630 B-cell CLL/lymphoma 7 protein family member A protein-coding 625939948 Topaz1 testis and ovary specific TOPAZ 1 INVOLVED IN apoptotic process (ortholog); ectopic germ cell programmed cell death (ortholog); lncRNA transcription (ortholog) 8 113854527 113909620 + 30032202 116908011 MODEL JAAIVD010000027;XM_032911269 XP_032767160 protein TOPAZ1;testis and ovary specific PAZ domain containing 1 protein-coding 625939972 Lbr lamin B receptor ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); chromo shadow domain binding (ortholog); Delta14-sterol reductase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); neutrophil differentiation (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; histone modification pathway; ASSOCIATED WITH Anadysplasia-Like, Spontaneously Remitting Spondylometaphyseal Dysplasia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); fibrillar center (ortholog) 10 60150521 60173488 - 22301074;30032202 116911196 MODEL JAAIVD010000005;XM_032915067 XP_032770958 delta(14)-sterol reductase LBR protein-coding 625939990 LOC116883572 histone H2B type 1-C/E/F/G/I 14 42593271 42593667 + 22301074;30032202 116883572 MODEL JAAIVD010000009;XM_032884754 XP_032740645 protein-coding 625939995 LOC116907377 olfactory receptor 18-like 8 16582834 16583802 - 22301074;30032202 116907377 MODEL JAAIVD010000027;XM_032910330 XP_032766221 protein-coding 625939999 Il2rg interleukin 2 receptor subunit gamma ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-15 receptor activity (ortholog); interleukin-2 binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); interleukin-15-mediated signaling pathway (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); nucleoplasm (ortholog) X 59274899 59278707 + 22301074;30032202 116888510 MODEL JAAIVD010000014;XM_032889802;XM_032889804 XP_032745693;XP_032745695 cytokine receptor common subunit gamma protein-coding 625940014 LOC116894216 olfactory receptor 502 2 106616754 106617698 - 22301074;30032202 116894216 MODEL JAAIVD010000001;XM_032895929 XP_032751820 protein-coding 625940017 LOC116890203 40S ribosomal protein S25-like 1 261678264 261683752 + 116890203 MODEL JAAIVD010000025 pseudo 625940018 LOC116897730 transmembrane protein 234-like 4 90428157 90428466 + 116897730 MODEL JAAIVD010000003 pseudo 625940019 Rax retina and anterior neural fold homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH Anophthalmia (ortholog); Craniofacial Abnormalities (ortholog); genetic disease (ortholog) 15 65326543 65330369 + 22301074;30032202 116884750 MODEL JAAIVD010000010;XM_032885968 XP_032741859 retinal homeobox protein Rx protein-coding 625940025 Icam4 intercellular adhesion molecule 4 (Landsteiner-Wiener blood group) FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 8 17291686 17292866 + 22301074;30032202 116907744 MODEL JAAIVD010000027;XM_032910880 XP_032766771 intercellular adhesion molecule 4 protein-coding 625940032 LOC116887262 transcription factor BTF3-like 18 29092824 29093448 + 30032202 116887262 MODEL JAAIVD010000013;XM_032888828 XP_032744719 protein-coding 625940037 LOC116896013 annexin-2 receptor-like 3 176944947 176946284 - 116896013 MODEL JAAIVD010000012 pseudo 625940038 Stra8 stimulated by retinoic acid 8 INVOLVED IN activation of meiosis (ortholog); cellular response to retinoic acid (ortholog); male germ-line stem cell asymmetric division (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleus (ortholog) 6 104712717 104728107 - 22301074;30032202 116902896 MODEL JAAIVD010000024;XM_032905225 XP_032761116 stimulated by retinoic acid gene 8 protein homolog protein-coding 625940048 LOC116900343 olfactory receptor 10AG1-like 5 68924693 68925673 + 22301074 116900343 MODEL JAAIVD010000023;XM_032902097 XP_032757988 protein-coding 625940051 LOC116906388 small nucleolar RNA SNORD113/SNORD114 family 7 127246791 127246865 + 116906388 MODEL JAAIVD010000026;XR_004388658 snorna 625940054 LOC116886825 H/ACA ribonucleoprotein complex subunit 3-like 1 24442297 24442491 - 116886825 MODEL JAAIVD010000025 pseudo 625940055 LOC116913273 alpha-enolase-like 12 85300419 85303762 + 116913273 MODEL JAAIVD010000007 pseudo 625940056 Xrcc3 X-ray repair cross complementing 3 ENCODES a protein that exhibits crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH basal cell carcinoma (ortholog); brain glioma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 7 129402078 129410376 - 22301074;30032202 116905500 MODEL JAAIVD010000026;XM_032908520 XP_032764411 DNA repair protein XRCC3 protein-coding 625940067 Zscan25 zinc finger and SCAN domain containing 25 16 8017304 8028019 - 30032202 116885641 MODEL JAAIVD010000004;XM_032886950 XP_032742841 zinc finger and SCAN domain-containing protein 25 protein-coding 625940077 LOC116904707 small nucleolar RNA SNORA17 6 46519365 46519496 + 116904707 MODEL JAAIVD010000024;XR_004388402 snorna 625940080 Dhh desert hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); patched binding (ortholog); zinc ion binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male gonad development (ortholog); male sex determination (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY gonadal dysgenesis with minifascicular neuropathy (ortholog); 46,XY sex reversal 7 (ortholog); FOUND IN plasma membrane (ortholog) 1 271719745 271724190 - 22301074;30032202 116890247 MODEL JAAIVD010000025;XM_032890973 XP_032746864 desert hedgehog protein protein-coding 625940087 Tnr tenascin R ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN associative learning (ortholog); extracellular matrix organization (ortholog); locomotory exploration behavior (ortholog); ASSOCIATED WITH genetic disease (ortholog); Gliosis (ortholog); NEURODEVELOPMENTAL DISORDER, NONPROGRESSIVE, WITH SPASTICITY AND TRANSIENT OPISTHOTONUS (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); glutamatergic synapse (ortholog) 10 38841420 39228742 + 22301074 116910887 MODEL JAAIVD010000005;XM_032914659 XP_032770550 tenascin-R protein-coding 625940114 Rnps1 RNA binding protein with serine rich domain 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN ASAP complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 9 1704213 1714510 + 22301074;30032202 116909106 MODEL JAAIVD010000002;XM_032912581;XM_032912582 XP_032768472;XP_032768473 RNA-binding protein with serine-rich domain 1 protein-coding 625940129 Parp1 poly(ADP-ribose) polymerase 1 ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); ATP generation from poly-ADP-D-ribose (ortholog); base-excision repair (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 58901223 58933123 + 22301074 116911109 MODEL JAAIVD010000005;XM_032914949 XP_032770840 poly [ADP-ribose] polymerase 1 protein-coding 625940156 Fkbp9 FKBP prolyl isomerase 9 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 84139946 84188436 - 22301074 116903743 MODEL JAAIVD010000024;XM_032906427 XP_032762318 peptidyl-prolyl cis-trans isomerase FKBP9 protein-coding 625940170 LOC116899868 small nucleolar RNA SNORA17 4 122144786 122144918 + 116899868 MODEL JAAIVD010000003;XR_004387862 snorna 625940173 Tmem44 transmembrane protein 44 4 15446714 15481987 - 116898747 MODEL JAAIVD010000003;XM_032900065;XM_032900066 XP_032755956;XP_032755957 protein-coding 625940191 Hes6 hes family bHLH transcription factor 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); FOUND IN transcription regulator complex (ortholog) 4 163407054 163408785 - 22301074;30032202 116899639 MODEL JAAIVD010000003;XM_032901635;XM_032901636 XP_032757526;XP_032757527 transcription cofactor HES-6 protein-coding 625940202 Tiam1 TIAM Rac1 associated GEF 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); cardiac muscle hypertrophy (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Mouth Neoplasms (ortholog); neurodevelopmental disorder with language delay and seizures (ortholog); FOUND IN axonal growth cone (ortholog); cell-cell contact zone (ortholog); cell-cell junction (ortholog) 4 54606893 54789415 + 22301074;30032202 116899013 MODEL JAAIVD010000003;XM_032900461;XM_032900462 XP_032756352;XP_032756353 T-lymphoma invasion and metastasis-inducing protein 1 protein-coding 625940238 Zdhhc5 zDHHC palmitoyltransferase 5 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); fatty acid transport (ortholog); NLRP3 inflammasome complex assembly (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 5 62069978 62093177 - 22301074;30032202 116901585 MODEL JAAIVD010000023;XM_032903601 XP_032759492 palmitoyltransferase ZDHHC5;zinc finger DHHC-type palmitoyltransferase 5 protein-coding 625940253 Nxn nucleoredoxin ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN circulatory system development (ortholog); in utero embryonic development (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH autosomal recessive Robinow syndrome 2 (ortholog); basal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog) 9 94963609 95105208 - 22301074 116910494 MODEL JAAIVD010000002;XM_032914385 XP_032770276 protein-coding 625940265 LOC116913924 ribonuclease pancreatic delta-type 12 72183919 72186530 + 22301074;30032202 116913924 Q8VD86 MODEL AJ315463;JAAIVD010000007;XM_032918192 CAC86444;Q8VD86;XP_032774083 RNase 1 delta;pancreatic ribonuclease delta protein-coding 625940271 LOC116894565 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178596242 178610001 + 30032202 116894565 MODEL JAAIVD010000001;XM_032896275;XM_032896276;XM_032896278 XP_032752166;XP_032752167;XP_032752169 leukocyte immunoglobulin-like receptor subfamily B member 3A protein-coding 625940288 N4bp3 NEDD4 binding protein 3 INVOLVED IN innate immune response (ortholog); FOUND IN cytoplasmic vesicle (ortholog) 9 34230179 34233165 - 30032202 116909928 MODEL JAAIVD010000002;XM_032913697 XP_032769588 NEDD4-binding protein 3 protein-coding 625940296 Clstn3 calsyntenin 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); enzyme inhibitor activity (ortholog); neurexin family protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); cold-induced thermogenesis (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 23320049 23353227 + 22301074;30032202 116903292 MODEL JAAIVD010000024;XM_032905713 XP_032761604 calsyntenin-3 protein-coding 625940318 LOC116895747 60S ribosomal protein L19-like 3 35555884 35561793 + 116895747 MODEL JAAIVD010000012 pseudo 625940319 LOC116884058 gap junction delta-4 protein-like 14 9768353 9770911 - 22301074;30032202 116884058 MODEL JAAIVD010000009;XM_032885305 XP_032741196 protein-coding 625940323 Pi4kb phosphatidylinositol 4-kinase beta ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); 14-3-3 protein binding (ortholog); INVOLVED IN inner ear development (ortholog); lysosome organization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 87 (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 62241178 62273770 - 30032202 116896574 MODEL JAAIVD010000012;XM_032897789;XM_032897790;XM_032897791;XM_032897792;XM_032897793;XM_032897794 XP_032753680;XP_032753681;XP_032753682;XP_032753683;XP_032753684;XP_032753685 protein-coding 625940350 LOC116887850 E3 ubiquitin-protein ligase NRDP1-like X 41386984 41400884 - 116887850 MODEL JAAIVD010000014 pseudo 625940351 LOC116893549 ferritin heavy chain-like 2 207955430 207956328 - 116893549 MODEL JAAIVD010000001;XR_004386996 pseudo 625940354 Abcb1 ATP binding cassette subfamily B member 1 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN adult heart development (ortholog); aldosterone secretion (ortholog); carboxylic acid transmembrane transport (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); acute lymphoblastic leukemia (ortholog); adrenocortical carcinoma (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) 6 140524309 140601425 + 22301074 116904144 MODEL JAAIVD010000024;XM_032907039 XP_032762930 ATP-dependent translocase ABCB1 protein-coding 625940385 Svbp small vasohibin binding protein ENCODES a protein that exhibits microtubule binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); negative regulation of endothelial cell migration (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN apical part of cell (ortholog) 1 37747886 37753756 - 30032202 116897711 MODEL JAAIVD010000025;XM_032899170;XM_032899175 XP_032755061;XP_032755066 small vasohibin-binding protein protein-coding 625940395 Prune2 prune homolog 2 with BCH domain ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) 2 17061917 17311915 + 22301074;30032202 116891008 MODEL JAAIVD010000001;XM_032891689 XP_032747580 protein prune homolog 2 protein-coding 625940417 Diras1 DIRAS family GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); ASSOCIATED WITH early myoclonic encephalopathy (ortholog); FOUND IN plasma membrane (ortholog) 1 153861306 153865181 + 22301074;30032202 116904631 MODEL JAAIVD010000025;XM_032907428 XP_032763319 GTP-binding protein Di-Ras1 protein-coding 625940423 Slc25a29 solute carrier family 25 member 29 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); high-affinity lysine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transport (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 7 126510363 126520728 - 30032202 116905456 MODEL JAAIVD010000026;XM_032908412;XM_032908413;XM_032908414 XP_032764303;XP_032764304;XP_032764305 mitochondrial basic amino acids transporter protein-coding 625940437 Nim1k NIM1 serine/threonine protein kinase ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog) 3 177158603 177203756 + 22301074;30032202 116897164 MODEL JAAIVD010000012;XM_032898841;XM_032898842 XP_032754732;XP_032754733 serine/threonine-protein kinase NIM1 protein-coding 625940448 G3bp1 G3BP stress granule assembly factor 1 ENCODES a protein that exhibits DNA helicase activity (ortholog); DNA/RNA helicase activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of type I interferon production (ortholog); ASSOCIATED WITH Disease Progression (ortholog); malignant astrocytoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 37885529 37915960 + 30032202 116908681 MODEL JAAIVD010000002;XM_032911990 XP_032767881 ras GTPase-activating protein-binding protein 1 protein-coding 625940464 LOC116909114 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 9 1208721 1209197 + 116909114 MODEL JAAIVD010000002 pseudo 625940465 Katnip katanin interacting protein INVOLVED IN cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH ciliopathy (ortholog); Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 76059623 76222364 - 116891534 MODEL JAAIVD010000001;XM_032892686;XM_032892687;XM_032892688;XM_032892689 XP_032748577;XP_032748578;XP_032748579;XP_032748580 Kiaa0556 protein KIAA0556 homolog protein-coding 625940503 LOC116900851 60S ribosomal protein L30-like 5 62634065 62634543 - 116900851 MODEL JAAIVD010000023 pseudo 625940504 LOC116900395 olfactory receptor 4P4-like 5 69879790 69880721 - 22301074 116900395 MODEL JAAIVD010000023;XM_032902141 XP_032758032 protein-coding 625940508 Tomm20 translocase of outer mitochondrial membrane 20 ENCODES a protein that exhibits mitochondrion targeting sequence binding (ortholog); protein-transporting ATPase activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN protein targeting to mitochondrion (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to muscle activity (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; ASSOCIATED WITH muscular atrophy (ortholog); FOUND IN cell periphery (ortholog); migrasome (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 17 46457609 46467433 - 22301074;30032202 116886072 MODEL JAAIVD010000011;XM_032887385 XP_032743276 mitochondrial import receptor subunit TOM20 homolog protein-coding 625940517 LOC116914315 60S ribosomal protein L4-like 13 41283470 41284674 + 116914315 MODEL JAAIVD010000008 pseudo 625940518 LOC116900295 olfactory receptor 8K3-like 5 63671224 63672178 - 116900295 MODEL JAAIVD010000023 pseudo 625940519 Cpped1 calcineurin like phosphoesterase domain containing 1 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 9 10384251 10497938 + 22301074 116909726 MODEL JAAIVD010000002;XM_032913402 XP_032769293 serine/threonine-protein phosphatase CPPED1 protein-coding 625940527 LOC116885203 procollagen C-endopeptidase enhancer 1-like 16 16842989 16844987 + 22301074 116885203 MODEL JAAIVD010000004;XM_032886435 XP_032742326 protein-coding 625940535 LOC116902383 uncharacterized LOC116902383 5 154531465 154534854 + 116902383 MODEL JAAIVD010000023;XR_004388065 ncrna 625940540 Col13a1 collagen type XIII alpha 1 chain ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); endochondral ossification (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 19 (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog) 18 27663043 27802577 - 116887663 MODEL JAAIVD010000013;XM_032889262 XP_032745153 collagen alpha-1(XIII) chain protein-coding 625940583 LOC116908196 immunoglobulin superfamily DCC subclass member 3-like 8 59445845 59459816 + 30032202 116908196 MODEL JAAIVD010000027;XM_032911478 XP_032767369 protein-coding 625940591 Col8a2 collagen type VIII alpha 2 chain INVOLVED IN camera-type eye morphogenesis (ortholog); endothelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Corneal Dystrophy, Fuchs' Endothelial, 1 (ortholog); Fuchs' endothelial dystrophy (ortholog); genetic disease (ortholog) 1 31973958 31978597 - 22301074 116896627 MODEL JAAIVD010000025;XM_032897929 XP_032753820 collagen alpha-2(VIII) chain protein-coding 625940596 LOC116903669 60S ribosomal protein L31-like 6 3470914 3471297 + 22301074;30032202 116903669 MODEL JAAIVD010000024;XM_032906329 XP_032762220 protein-coding 625940600 Epb41l1 erythrocyte membrane protein band 4.1 like 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 11 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); intellectual disability (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 5 135767233 135887593 + 22301074;30032202 116902204 MODEL JAAIVD010000023;XM_032904582;XM_032904584;XM_032904585;XM_032904586;XM_032904587;XM_032904588;XM_032904589;XM_032904590;XM_032904591;XM_032904592;XM_032904593;XM_032904595 XP_032760473;XP_032760475;XP_032760476;XP_032760477;XP_032760478;XP_032760479;XP_032760480;XP_032760481;XP_032760482;XP_032760483;XP_032760484;XP_032760486 band 4.1-like protein 1 protein-coding 625940647 Sh2d4b SH2 domain containing 4B 13 19327157 19411095 - 30032202 116914944 MODEL JAAIVD010000008;XM_032919367 XP_032775258 SH2 domain-containing protein 4B protein-coding 625940659 Septin14 septin 14 INVOLVED IN neuron migration (ortholog); protein localization to perinuclear region of cytoplasm (ortholog); spermatid development (ortholog); ASSOCIATED WITH glioblastoma (ortholog); Parkinson's disease (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); cytoplasm (ortholog) 16 24270012 24293995 + 22301074;30032202 116885408 MODEL JAAIVD010000004;XM_032886694 XP_032742585 septin-14 protein-coding 625940673 Lrrc59 leucine rich repeat containing 59 ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog) 9 50904063 50918504 - 22301074 116908832 MODEL JAAIVD010000002;XM_032912251 XP_032768142 leucine-rich repeat-containing protein 59 protein-coding 625940684 LOC116897904 transmembrane protein 258-like 4 33409151 33409539 - 22301074;30032202 116897904 MODEL JAAIVD010000003;XM_032899308 XP_032755199 protein-coding 625940689 LOC116910729 small nucleolar RNA SNORD91 family 9 93642606 93642696 + 116910729 MODEL JAAIVD010000002;XR_004389247 snorna 625940692 LOC116892706 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178496413 178504078 + 30032202 116892706 MODEL JAAIVD010000001;XM_032894572 XP_032750463 protein-coding 625940710 Ifih1 interferon induced with helicase C domain 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 7 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 5 40175101 40221913 - 22301074;30032202 116901451 MODEL JAAIVD010000023;XM_032903387 XP_032759278 interferon-induced helicase C domain-containing protein 1 protein-coding 625940732 Ppp1r1b protein phosphatase 1 regulatory inhibitor subunit 1B ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Brain Hypoxia-Ischemia (ortholog); brain infarction (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine head (ortholog); dendritic spine neck (ortholog) 9 56035765 56044881 - 22301074;30032202 116909449 MODEL JAAIVD010000002;XM_032913028 XP_032768919 protein phosphatase 1 regulatory subunit 1B protein-coding 625940743 Unc5d unc-5 netrin receptor D INVOLVED IN axon guidance (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); pyramidal neuron differentiation (ortholog); FOUND IN cell surface (ortholog) 13 57459193 57989621 + 22301074;30032202 116914679 MODEL JAAIVD010000008;XM_032919093;XM_032919094 XP_032774984;XP_032774985 netrin receptor UNC5D protein-coding 625940768 Tmem140 transmembrane protein 140 6 104781278 104782627 - 116903971 MODEL JAAIVD010000024;XM_032906772 XP_032762663 protein-coding 625940773 LOC116894415 keratin-associated protein 19-2-like 2 158649427 158649747 - 116894415 MODEL JAAIVD010000001;XM_032896118 XP_032752009 protein-coding 625940776 LOC116900536 olfactory receptor 4F15-like 5 89594610 89595548 + 22301074 116900536 MODEL JAAIVD010000023;XM_032902263 XP_032758154 protein-coding 625940779 Lzic leucine zipper and CTNNBIP1 domain containing INVOLVED IN response to ionizing radiation (ortholog); ASSOCIATED WITH osteosarcoma (ortholog) 1 11273388 11286217 - 22301074;30032202 116892618 MODEL JAAIVD010000025;XM_032894428;XM_032894438;XM_032894447 XP_032750319;XP_032750329;XP_032750338 protein LZIC protein-coding 625940797 Srpra SRP receptor subunit alpha ASSOCIATED WITH Shwachman-Diamond syndrome (ortholog); FOUND IN membrane (ortholog); signal recognition particle receptor complex (ortholog) 8 30763331 30769382 + 22301074;30032202 116907785 MODEL JAAIVD010000027;XM_032910926 XP_032766817 signal recognition particle receptor subunit alpha protein-coding 625940815 Bms1 BMS1 ribosome biogenesis factor INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH ectodermal dysplasia (ortholog); nonsyndromic aplasia cutis congenita (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 28328848 28361313 + 22301074;30032202 116903350 MODEL JAAIVD010000024;XM_032905820 XP_032761711 ribosome biogenesis protein BMS1 homolog protein-coding 625940841 LOC116910267 protein FAM162A-like 9 34717355 34717975 + 116910267 MODEL JAAIVD010000002 pseudo 625940842 Cryaa crystallin alpha A ENCODES a protein that exhibits identical protein binding (ortholog); structural molecule activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); apoptotic process involved in morphogenesis (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cataract (ortholog); cataract 9 multiple types (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 2172342 2176086 - 22301074;30032202 116887067 MODEL JAAIVD010000013;XM_032888567;XM_032888568;XM_032888569 XP_032744458;XP_032744459;XP_032744460 alpha-crystallin A chain protein-coding 625940856 LOC116901018 zinc finger protein 219-like 5 128514860 128517057 - 116901018 MODEL JAAIVD010000023 pseudo 625940857 LOC116893247 U6 snRNA-associated Sm-like protein LSm2 2 127319148 127319527 + 116893247 MODEL JAAIVD010000001 pseudo 625940858 LOC116903458 E3 ubiquitin-protein ligase PDZRN3-like 6 45677982 45702009 + 22301074;30032202 116903458 MODEL JAAIVD010000024;XM_032906011;XM_032906012 XP_032761902;XP_032761903 protein-coding 625940871 Entpd3 ectonucleoside triphosphate diphosphohydrolase 3 ENCODES a protein that exhibits apyrase activity (ortholog); nucleoside diphosphate phosphatase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN nucleoside diphosphate catabolic process (ortholog); nucleoside triphosphate catabolic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 8 111748186 111777269 + 30032202 116907946 MODEL JAAIVD010000027;XM_032911167 XP_032767058 protein-coding 625940886 LOC116897586 small nucleolar RNA SNORA17 3 53900920 53901035 - 116897586 MODEL JAAIVD010000012 pseudo 625940887 LOC116900191 60S ribosomal protein L15-like 5 48187527 48188187 - 116900191 MODEL JAAIVD010000023 pseudo 625940888 LOC116900557 olfactory receptor 4K14-like 5 89994994 89995935 + 22301074 116900557 MODEL JAAIVD010000023;XM_032902283 XP_032758174 protein-coding 625940892 Nat10 N-acetyltransferase 10 ENCODES a protein that exhibits DNA polymerase binding (ortholog); mRNA N-acetyltransferase activity (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of translation (ortholog); protein acetylation (ortholog); FOUND IN midbody (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) 5 81552882 81588494 - 22301074;30032202 116901688 MODEL JAAIVD010000023;XM_032903814 XP_032759705 RNA cytidine acetyltransferase protein-coding 625940924 LOC116903043 TD and POZ domain-containing protein 3-like 6 159561003 159561773 + 30032202 116903043 MODEL JAAIVD010000024;XM_032905345 XP_032761236 protein-coding 625940927 Prmt9 protein arginine methyltransferase 9 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mRNA processing (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog) 17 24761004 24780689 + 22301074;30032202 116886428 MODEL JAAIVD010000011;XM_032887914 XP_032743805 protein arginine N-methyltransferase 9 protein-coding 625940939 Gcnt1 glucosaminyl (N-acetyl) transferase 1 ENCODES a protein that exhibits beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN cell adhesion molecule production (ortholog); glycoprotein biosynthetic process (ortholog); kidney morphogenesis (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN extracellular space (ortholog); Golgi cisterna (ortholog); trans-Golgi network (ortholog) 2 17410096 17415097 - 22301074;30032202 116891009 MODEL JAAIVD010000001;XM_032891690 XP_032747581 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase protein-coding 625940944 LOC116912813 60S ribosomal protein L14-like 11 22709955 22710586 + 116912813 MODEL JAAIVD010000006 pseudo 625940945 Cntrl centriolin INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH nephronophthisis (ortholog); FOUND IN centriolar satellite (ortholog); centriolar subdistal appendage (ortholog); centrosome (ortholog) 5 466561 540039 - 22301074 116901103 MODEL JAAIVD010000023;XM_032902666 XP_032758557 protein-coding 625940992 Lrrc41 leucine rich repeat containing 41 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 39755387 39776261 + 30032202 116898221 MODEL JAAIVD010000025;XM_032899580 XP_032755471 leucine-rich repeat-containing protein 41 protein-coding 625941006 LOC116904740 small nucleolar RNA SNORA17 6 124982548 124982677 + 116904740 MODEL JAAIVD010000024;XR_004388427 snorna 625941009 Agmo alkylglycerol monooxygenase ENCODES a protein that exhibits glyceryl-ether monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); membrane lipid metabolic process (ortholog); triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 50636544 50682316 + 22301074;30032202 116906062 MODEL JAAIVD010000026;XM_032909100 XP_032764991 protein-coding 625941019 LOC116895100 small nucleolar RNA SNORD97 2 90378651 90378838 + 116895100 MODEL JAAIVD010000001;XR_004387261 snorna 625941022 LOC116909076 60S ribosomal protein L17-like 9 86502014 86511595 + 116909076 MODEL JAAIVD010000002 pseudo 625941023 Klk12 kallikrein related peptidase 12 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog) 2 155619310 155623666 - 22301074 116894358 MODEL JAAIVD010000001;XM_032896060 XP_032751951 kallikrein-12 protein-coding 625941031 Ntrk2 neurotrophic receptor tyrosine kinase 2 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); brain-derived neurotrophic factor receptor activity (ortholog); neurotrophin binding (ortholog); INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) 14 79014321 79328636 - 22301074;30032202 116884038 MODEL JAAIVD010000009;XM_032885278;XM_032885279;XM_032885280;XM_032885281;XM_032885282 XP_032741169;XP_032741170;XP_032741171;XP_032741172;XP_032741173 BDNF/NT-3 growth factors receptor protein-coding 625941068 LOC116888609 ubiquitin-conjugating enzyme E2 D4-like X 52585964 52586469 - 30032202 116888609 MODEL JAAIVD010000014;XM_032889908 XP_032745799 protein-coding 625941072 LOC116890438 U7 small nuclear RNA 1 103696796 103696856 - 116890438 MODEL JAAIVD010000025;XR_004386634 snrna 625941075 Ankrd52 ankyrin repeat domain 52 1 155847564 155865962 + 22301074 116906046 MODEL JAAIVD010000025;XM_032909096 XP_032764987 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C protein-coding 625941107 Mmut methylmalonyl-CoA mutase ENCODES a protein that exhibits cobalamin binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); positive regulation of GTPase activity (ortholog); post-embryonic development (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH brain disease (ortholog); inherited metabolic disorder (ortholog); methylmalonic acidemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 94919182 94944594 - 22301074;30032202 116899238 MODEL JAAIVD010000003;XM_032900843 XP_032756734 methylmalonyl-CoA mutase, mitochondrial protein-coding 625941123 LOC116899230 sulfotransferase 1C2-like 4 91007148 91024431 - 116899230 MODEL JAAIVD010000003;XR_004387699 pseudo 625941132 LOC116911049 uncharacterized LOC116911049 10 49363437 49364678 + 116911049 MODEL JAAIVD010000005;XR_004389308 ncrna 625941136 Rragb Ras related GTP binding B ENCODES a protein that exhibits GTP binding (ortholog); GTPase binding (ortholog); guanyl ribonucleotide binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to leucine starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) X 18380032 18412414 + 22301074;30032202 116888351 MODEL JAAIVD010000014;XM_032889620 XP_032745511 ras-related GTP-binding protein B protein-coding 625941151 Fer1l6 fer-1 like family member 6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) 1 233051010 233198188 + 22301074;30032202 116911789 MODEL JAAIVD010000025;XM_032915788 XP_032771679 fer-1-like protein 6 protein-coding 625941197 LOC116890552 small nucleolar RNA SNORA17 1 151084658 151084788 - 116890552 MODEL JAAIVD010000025;XR_004386727 snorna 625941200 LOC116883897 histone H2A type 1-H-like 14 41970998 41971380 + 22301074;30032202 116883897 MODEL JAAIVD010000009;XM_032885165 XP_032741056 protein-coding 625941205 LOC116885789 olfactory receptor 13C7-like 1 2679766 2680722 + 22301074 116885789 MODEL JAAIVD010000025;XM_032887125 XP_032743016 protein-coding 625941208 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60936089 60936160 + 116897670 MODEL JAAIVD010000012 trna 625941209 Slc16a4 solute carrier family 16 member 4 3 50938797 50959694 - 22301074;30032202 116896392 MODEL JAAIVD010000012;XM_032897522;XM_032897523 XP_032753413;XP_032753414 monocarboxylate transporter 5 protein-coding 625941222 LOC116902730 high mobility group protein B2-like 6 56688713 56689378 - 116902730 MODEL JAAIVD010000024 pseudo 625941223 LOC116902714 heterogeneous nuclear ribonucleoprotein A3-like 6 51809533 51810506 + 116902714 MODEL JAAIVD010000024 pseudo 625941224 Dnajc4 DnaJ heat shock protein family (Hsp40) member C4 2 804199 808099 + 116894810 MODEL JAAIVD010000001;XM_032896476 XP_032752367 dnaJ homolog subfamily C member 4 protein-coding 625941234 LOC116892284 signal peptidase complex subunit 2-like 1 61095536 61096323 - 116892284 MODEL JAAIVD010000025 pseudo 625941235 Bckdhb branched chain keto acid dehydrogenase E1 subunit beta ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); response to cAMP (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); maple syrup urine disease (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 8 78054033 78242113 + 22301074;30032202 116906672 MODEL JAAIVD010000027;XM_032909458;XM_032909459 XP_032765349;XP_032765350 2-oxoisovalerate dehydrogenase subunit beta, mitochondrial protein-coding 625941252 LOC116895774 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 3 49158502 49162875 + 116895774 MODEL JAAIVD010000012 pseudo 625941253 LOC116890451 small nucleolar RNA SNORA16B/SNORA16A family 1 94226915 94227033 + 116890451 MODEL JAAIVD010000025;XR_004386643 snorna 625941256 Epn3 epsin 3 ENCODES a protein that exhibits EH domain binding (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); recessive dystrophic epidermolysis bullosa (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 51040782 51050875 + 30032202 116909662 MODEL JAAIVD010000002;XM_032913315 XP_032769206 epsin-3 protein-coding 625941270 P4ha1 prolyl 4-hydroxylase subunit alpha 1 ENCODES a protein that exhibits identical protein binding (ortholog); procollagen-proline 4-dioxygenase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); procollagen-proline 4-dioxygenase complex (ortholog) 18 24068198 25228650 + 22301074;30032202 116886893 MODEL JAAIVD010000013;XM_032888353;XM_032888354;XM_032888355 XP_032744244;XP_032744245;XP_032744246 prolyl 4-hydroxylase subunit alpha-1 protein-coding 625941297 Pde1b phosphodiesterase 1B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); INVOLVED IN cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); dopamine catabolic process (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH cerebellar ataxia (ortholog); learning disability (ortholog); Parkinsonism (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog) 1 259558381 259585489 - 22301074 116883161 MODEL JAAIVD010000025;XM_032884191 XP_032740082 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1B protein-coding 625941317 Nfatc1 nuclear factor of activated T cells 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aortic valve development (ortholog); aortic valve morphogenesis (ortholog); B-1a B cell differentiation (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); congenital heart disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 15 51523023 51628605 + 30032202 116884694 MODEL JAAIVD010000010;XM_032885878 XP_032741769 nuclear factor of activated T-cells, cytoplasmic 1 protein-coding 625941331 LOC116913121 60S ribosomal protein L21-like 12 14099287 14099769 - 116913121 MODEL JAAIVD010000007 pseudo 625941332 Rhot1 ras homolog family member T1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion binding (ortholog); GDP binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); establishment of mitochondrion localization by microtubule attachment (ortholog); mitochondrial outer membrane permeabilization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH motor neuron disease (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 90150402 90218031 - 22301074;30032202 116908521 MODEL JAAIVD010000002;XM_032911695;XM_032911696;XM_032911697;XM_032911698 XP_032767586;XP_032767587;XP_032767588;XP_032767589 mitochondrial Rho GTPase 1 protein-coding 625941360 LOC116886907 trafficking protein particle complex subunit 3-like protein 18 24274282 24306669 - 30032202 116886907 MODEL JAAIVD010000013;XM_032888372 XP_032744263 protein-coding 625941369 LOC116906163 26S proteasome complex subunit SEM1-like 7 101023474 101024393 - 22301074;30032202 116906163 MODEL JAAIVD010000026;XM_032909142 XP_032765033 protein-coding 625941373 Cenpx centromere protein X ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); replication fork processing (ortholog); resolution of meiotic recombination intermediates (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) 9 63305537 63308417 + 22301074;30032202 116909852 MODEL JAAIVD010000002;XM_032913578;XM_032913579 XP_032769469;XP_032769470 protein-coding 625941386 LOC116911693 40S ribosomal protein S2-like 10 1177466 1178315 - 116911693 MODEL JAAIVD010000005 pseudo 625941387 LOC116889554 U2 spliceosomal RNA X 126505542 126505614 + 116889554 MODEL JAAIVD010000014 pseudo 625941388 LOC116911845 small nucleolar RNA SNORA17 10 84312654 84312756 + 116911845 MODEL JAAIVD010000005 pseudo 625941389 LOC116909269 cytochrome c oxidase subunit 6B1-like 9 13292580 13292927 - 22301074;30032202 116909269 MODEL JAAIVD010000002;XM_032912797 XP_032768688 protein-coding 625941392 Il31ra interleukin 31 receptor A ENCODES a protein that exhibits cytokine binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to other organism (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); primary cutaneous amyloidosis (ortholog); primary localized cutaneous amyloidosis 2 (ortholog); FOUND IN external side of plasma membrane (ortholog) 3 184477777 184532996 + 30032202 116895654 MODEL JAAIVD010000012;XM_032896861 XP_032752752 interleukin-31 receptor subunit alpha protein-coding 625941411 Mtmr2 myotubularin related protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol phosphate phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); INVOLVED IN dendritic spine maintenance (ortholog); myelin assembly (ortholog); negative regulation of endocytosis (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4B1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 9610652 9659258 + 22301074;30032202 116906785 MODEL JAAIVD010000027;XM_032909640;XM_032909641 XP_032765531;XP_032765532 myotubularin-related protein 2 protein-coding 625941433 Luzp4 leucine zipper protein 4 X 101050921 101074448 + 116888811 MODEL JAAIVD010000014;XM_032890090 XP_032745981 protein-coding 625941444 LOC116891849 olfactory receptor 5B2-like 2 13232839 13233781 + 116891849 MODEL JAAIVD010000001 pseudo 625941445 LOC116889459 U7 small nuclear RNA X 12446489 12446552 + 116889459 MODEL JAAIVD010000014;XR_004386415 snrna 625941448 LOC116883398 uncharacterized LOC116883398 14 47471542 47486326 - 116883398 MODEL JAAIVD010000009;XR_004385757 ncrna 625941453 LOC116887388 glutathione S-transferase theta-4 18 11622768 11630099 + 30032202 116887388 MODEL JAAIVD010000013;XM_032888981 XP_032744872 protein-coding 625941462 Snrnp35 small nuclear ribonucleoprotein U11/U12 subunit 35 FOUND IN nucleolus (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 16 29381396 29389109 - 30032202 116885635 MODEL JAAIVD010000004;XM_032886941;XM_032886942 XP_032742832;XP_032742833 U11/U12 small nuclear ribonucleoprotein 35 kDa protein protein-coding 625941471 Plekhb1 pleckstrin homology domain containing B1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN regulation of cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog) 2 98949506 98963446 - 30032202 116891745 MODEL JAAIVD010000001;XM_032893053;XM_032893054 XP_032748944;XP_032748945 pleckstrin homology domain-containing family B member 1 protein-coding 625941486 Sfr1 SWI5 dependent homologous recombination repair protein 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); double-strand break repair via homologous recombination (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN centrosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 47258918 47262833 + 30032202 116891271 MODEL JAAIVD010000001;XM_032892168;XM_032892169 XP_032748059;XP_032748060 swi5-dependent recombination DNA repair protein 1 homolog protein-coding 625941497 Haus7 HAUS augmin like complex subunit 7 ENCODES a protein that exhibits thioesterase binding (ortholog); INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); HAUS complex (ortholog) X 129059611 129079900 - 30032202 116888796 MODEL JAAIVD010000014;XM_032890077 XP_032745968 HAUS augmin-like complex subunit 7 protein-coding 625941511 Srp68 signal recognition particle 68 ENCODES a protein that exhibits 7S RNA binding (ortholog); protein domain specific binding (ortholog); ribosome binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Craniofacial Abnormalities (ortholog); Severe Congenital Neutropenia 10 (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); signal recognition particle (ortholog) 9 67795735 67821971 + 22301074;30032202 116909033 MODEL JAAIVD010000002;XM_032912513 XP_032768404 signal recognition particle subunit SRP68 protein-coding 625941531 Elk1 ETS transcription factor ELK1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to lipid (ortholog); cellular response to testosterone stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anxiety disorder (ortholog); Brain Injuries (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); mitochondrial membrane (ortholog) X 2838791 2854778 - 22301074;30032202 116889397 MODEL JAAIVD010000014;XM_032890501;XM_032890502 XP_032746392;XP_032746393 ETS domain-containing protein Elk-1 protein-coding 625941543 Atf2 activating transcription factor 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN abducens nucleus development (ortholog); adipose tissue development (ortholog); amelogenesis (ortholog); PARTICIPATES IN adenosine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); basal cell carcinoma (ortholog); disease of cellular proliferation (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) 5 51170000 51246336 - 30032202 116901524 MODEL JAAIVD010000023;XM_032903502;XM_032903503 XP_032759393;XP_032759394 cyclic AMP-dependent transcription factor ATF-2 protein-coding 625941562 LOC116904068 developmental pluripotency-associated protein 2-like 6 134754761 134755556 + 116904068 MODEL JAAIVD010000024 pseudo 625941563 LOC116898234 heterogeneous nuclear ribonucleoprotein A3-like 4 148623357 148624436 + 116898234 MODEL JAAIVD010000003 pseudo 625941564 Klhl33 kelch like family member 33 12 72419241 72425739 + 22301074 116913888 MODEL JAAIVD010000007;XM_032918175 XP_032774066 kelch-like protein 33 protein-coding 625941570 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50211606 50211679 - 116911915 MODEL JAAIVD010000005 trna 625941571 LOC116892731 olfactory receptor 5-like 2 179595130 179596068 + 22301074 116892731 MODEL JAAIVD010000001;XM_032894605 XP_032750496 protein-coding 625941574 Neurod1 neuronal differentiation 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); anterior/posterior pattern specification (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 5 56676479 56680550 - 22301074 116901562 MODEL JAAIVD010000023;XM_032903556 XP_032759447 neurogenic differentiation factor 1 protein-coding 625941580 LOC116888829 aldose reductase-related protein 2-like 1 104687694 104688600 - 116888829 MODEL JAAIVD010000025 pseudo 625941581 LOC116914715 beta-defensin 4-like 13 64921779 64923931 - 22301074;30032202 116914715 MODEL JAAIVD010000008;XM_032919146 XP_032775037 protein-coding 625941585 Tceal1 transcription elongation factor A like 1 ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH GAIT DISTURBANCE, DYSMORPHIC FACIES, AND BEHAVIORAL ABNORMALITIES, X-LINKED (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 88465727 88467657 + 116889133 MODEL JAAIVD010000014;XM_032890304;XM_032890305;XM_032890306 XP_032746195;XP_032746196;XP_032746197 transcription elongation factor A protein-like 1 protein-coding 625941597 Spc25 SPC25 component of NDC80 kinetochore complex INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); kinetochore (ortholog); Ndc80 complex (ortholog) 5 46515253 46528559 - 22301074;30032202 116901479 MODEL JAAIVD010000023;XM_032903427;XM_032903428;XM_032903429 XP_032759318;XP_032759319;XP_032759320 kinetochore protein Spc25 protein-coding 625941614 LOC116913478 uncharacterized LOC116913478 12 66768857 66771477 + 116913478 MODEL JAAIVD010000007;XR_004389622 ncrna 625941618 Wdr5 WD repeat domain 5 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H3K4me1 reader activity (ortholog); histone H3Q5ser reader activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuron projection development (ortholog); positive regulation of gluconeogenesis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH congenital heart disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN ATAC complex (ortholog); histone acetyltransferase complex (ortholog); histone methyltransferase complex (ortholog) 5 9130397 9145872 - 30032202 116901237 MODEL JAAIVD010000023;XM_032902982 XP_032758873 WD repeat-containing protein 5 protein-coding 625941635 LOC116897270 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like 3 199539750 199541353 - 116897270 MODEL JAAIVD010000012 pseudo 625941636 Htr4 5-hydroxytryptamine receptor 4 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Anorexia (ortholog); anorexia nervosa (ortholog); atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 15 69509468 69647514 - 22301074;30032202 116884429 MODEL JAAIVD010000010;XM_032885516;XM_032885517 XP_032741407;XP_032741408 protein-coding 625941650 LOC116909357 somatotropin 9 72823133 72824654 + 22301074;30032202 116909357 MODEL JAAIVD010000002;XM_032912904;XM_032912905 XP_032768795;XP_032768796 protein-coding 625941666 LOC116886587 core histone macro-H2A.2-like 17 2729808 2736202 + 116886587 MODEL JAAIVD010000011 pseudo 625941667 Stpg3 sperm-tail PG-rich repeat containing 3 ASSOCIATED WITH epilepsy (ortholog) 5 11966716 11969420 + 116901319 MODEL JAAIVD010000023;XM_032903132 XP_032759023 protein STPG3 protein-coding 625941677 LOC116886767 5S ribosomal RNA 17 40232759 40232877 + 116886767 MODEL JAAIVD010000011;XR_004386168 rrna 625941680 LOC116895240 DTW domain-containing protein 2-like 3 24499573 24524754 - 116895240 MODEL JAAIVD010000012 pseudo 625941681 LOC116902845 60S ribosomal protein L36a-like 6 93426211 93426531 - 22301074;30032202 116902845 MODEL JAAIVD010000024;XM_032905175 XP_032761066 protein-coding 625941684 Abi3bp ABI family member 3 binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); regulation of dendritic spine morphogenesis (ortholog); regulation of postsynaptic density assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN dendritic shaft (ortholog); dendritic spine (ortholog); lamellipodium (ortholog) 4 40590394 40787817 + 22301074;30032202 116898904 MODEL JAAIVD010000003;XM_032900306 XP_032756197 target of Nesh-SH3 protein-coding 625941727 Ccdc154 coiled-coil domain containing 154 INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 1 (ortholog) 9 2427025 2436337 + 30032202 116909136 MODEL JAAIVD010000002;XM_032912623 XP_032768514 coiled-coil domain-containing protein 154 protein-coding 625941746 Elavl4 ELAV like RNA binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH High Myopia (ortholog); hypothyroidism (ortholog); learning disability (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cytoplasm (ortholog) 1 42902191 42989048 - 22301074 116898874 MODEL JAAIVD010000025;XM_032900247;XM_032900255;XM_032900263;XM_032900272;XM_032900283 XP_032756138;XP_032756146;XP_032756154;XP_032756163;XP_032756174 ELAV-like protein 4 protein-coding 625941770 Tex12 testis expressed 12 INVOLVED IN meiotic DNA repair synthesis (ortholog); synaptonemal complex assembly (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); synaptonemal complex (ortholog) 8 45029950 45039008 - 30032202 116906728 MODEL JAAIVD010000027;XM_032909539;XM_032909540;XM_032909541;XM_032909542 XP_032765430;XP_032765431;XP_032765432;XP_032765433 testis-expressed protein 12 protein-coding 625941788 LOC116903187 killer cell lectin-like receptor 5 6 17347448 17366959 - 116903187 MODEL JAAIVD010000024;XM_032905561;XM_032905562 XP_032761452;XP_032761453 protein-coding 625941798 Ston1 stonin 1 ENCODES a protein that exhibits cargo adaptor activity (ortholog); INVOLVED IN endocytosis (ortholog); focal adhesion assembly (ortholog); focal adhesion disassembly (ortholog); FOUND IN cell leading edge (ortholog); cell projection (ortholog); clathrin-coated pit (ortholog) 7 4156514 4240681 - 22301074;30032202 116905735 MODEL JAAIVD010000026;XM_032908700;XM_032908701;XM_032908702 XP_032764591;XP_032764592;XP_032764593 stonin-1 protein-coding 625941819 Ddx41 DEAD-box helicase 41 ENCODES a protein that exhibits DNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell population proliferation (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); aplastic anemia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 14 73845874 73851331 - 22301074;30032202 116883748 MODEL JAAIVD010000009;XM_032884992 XP_032740883 probable ATP-dependent RNA helicase DDX41 protein-coding 625941840 LOC116896203 heat shock cognate 71 kDa protein-like 3 20222393 20224445 + 116896203 MODEL JAAIVD010000012 pseudo 625941841 LOC116897352 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 3 220246750 220247990 + 116897352 MODEL JAAIVD010000012 pseudo 625941842 LOC116902566 U1 spliceosomal RNA 5 10384774 10384940 + 116902566 MODEL JAAIVD010000023;XR_004388162 snrna 625941845 Stard5 StAR related lipid transfer domain containing 5 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol import (ortholog) 2 116687201 116697516 - 22301074;30032202 116891885 MODEL JAAIVD010000001;XM_032893296 XP_032749187 stAR-related lipid transfer protein 5 protein-coding 625941855 Bbs1 Bardet-Biedl syndrome 1 ENCODES a protein that exhibits patched binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN adult behavior (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 2 2753804 2769572 + 30032202 116890753 MODEL JAAIVD010000001;XM_032891209;XM_032891210 XP_032747100;XP_032747101 Bardet-Biedl syndrome 1 protein protein-coding 625941877 Snrpd3 small nuclear ribonucleoprotein D3 polypeptide ENCODES a protein that exhibits enzyme binding (ortholog); histone pre-mRNA DCP binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); protein methylation (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 11914155 11929555 - 22301074;30032202 116887009 MODEL JAAIVD010000013;XM_032888493;XM_032888494 XP_032744384;XP_032744385 small nuclear ribonucleoprotein Sm D3 protein-coding 625941890 Clpx caseinolytic mitochondrial matrix peptidase chaperone subunit X ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent peptidase activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); proteolysis (ortholog); proteolysis involved in protein catabolic process (ortholog); ASSOCIATED WITH Erythropoietic Protoporphyria 2 (ortholog); FOUND IN cytosol (ortholog); endopeptidase Clp complex (ortholog); mitochondrial endopeptidase Clp complex (ortholog) 8 59591384 59630414 + 22301074;30032202 116906652 MODEL JAAIVD010000027;XM_032909436;XM_032909437 XP_032765327;XP_032765328 ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial protein-coding 625941909 Eif4g2 eukaryotic translation initiation factor 4 gamma 2 ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of autophagy (ortholog); positive regulation of axon extension (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH hypertension (ortholog); liver benign neoplasm (ortholog); renovascular hypertension (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 90372798 90384185 + 22301074;30032202 116893142 MODEL JAAIVD010000001;XM_032895068 XP_032750959 protein-coding 625941934 LOC116909197 olfactory receptor 1496-like 9 92673013 92673948 - 22301074;30032202 116909197 MODEL JAAIVD010000002;XM_032912697 XP_032768588 protein-coding 625941937 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12100070 12100142 + 116895149 MODEL JAAIVD010000001 trna 625941938 LOC116895898 60S ribosomal protein L7-like 3 117274481 117275284 + 116895898 MODEL JAAIVD010000012 pseudo 625941939 LOC116890123 olfactory receptor 8K3-like 1 241985489 241986430 - 22301074;30032202 116890123 MODEL JAAIVD010000025;XM_032890862 XP_032746753 protein-coding 625941942 LOC116907236 uncharacterized LOC116907236 8 10929114 10954575 + 116907236 MODEL JAAIVD010000027 pseudo 625941943 LOC116910763 U6 spliceosomal RNA 9 60938357 60938463 - 116910763 MODEL JAAIVD010000002;XR_004389272 snrna 625941946 C6H3orf20 chromosome 6 C3orf20 homolog FOUND IN cytoplasm (ortholog) 6 54991151 55030924 - 116903494 MODEL JAAIVD010000024;XM_032906082;XM_032906083 XP_032761973;XP_032761974 uncharacterized protein C3orf20 homolog protein-coding 625941968 Manf mesencephalic astrocyte derived neurotrophic factor ENCODES a protein that exhibits sulfatide binding (ortholog); INVOLVED IN ATF6-mediated unfolded protein response (ortholog); regulation of response to endoplasmic reticulum stress (ortholog); vasoconstriction of artery involved in ischemic response to lowering of systemic arterial blood pressure (ortholog); ASSOCIATED WITH breast cancer (ortholog); Diabetes, Deafness, Developmental Delay, and Short Stature Syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 8 98204432 98207654 - 30032202 116907506 MODEL JAAIVD010000027;XM_032910505 XP_032766396 mesencephalic astrocyte-derived neurotrophic factor protein-coding 625941976 LOC116910241 phosphoglycerate mutase 1-like 9 46409756 46410570 + 116910241 MODEL JAAIVD010000002 pseudo 625941977 Dazap2 DAZ associated protein 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN protein destabilization (ortholog); stress granule assembly (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) 1 262491590 262497114 - 116883952 MODEL JAAIVD010000025;XM_032885200;XM_032885203;XM_032885206 XP_032741091;XP_032741094;XP_032741097 DAZ-associated protein 2 protein-coding 625941993 Urb2 URB2 ribosome biogenesis homolog ASSOCIATED WITH epilepsy (ortholog); prostate cancer (ortholog); FOUND IN aggresome (ortholog); midbody (ortholog); nucleolus (ortholog) 17 43565911 43591412 + 30032202 116886091 MODEL JAAIVD010000011;XM_032887413;XM_032887414;XM_032887415 XP_032743304;XP_032743305;XP_032743306 unhealthy ribosome biogenesis protein 2 homolog protein-coding 625942013 LOC116900524 60S ribosomal protein L10a-like 5 84429581 84430241 + 116900524 MODEL JAAIVD010000023;XR_004387936 pseudo 625942016 LOC116899320 NADH-cytochrome b5 reductase-like FOUND IN nucleoplasm (ortholog) 1 47728729 47746810 - 22301074;30032202 116899320 MODEL JAAIVD010000025;XM_032900991;XM_032901002 XP_032756882;XP_032756893 protein-coding 625942032 LOC116905454 E3 ubiquitin-protein ligase CCNB1IP1-like 1 149537338 149538177 + 116905454 MODEL JAAIVD010000025 pseudo 625942033 Hamp hepcidin antimicrobial peptide ENCODES a protein that exhibits copper ion binding (ortholog); hormone activity (ortholog); iron ion transmembrane transporter inhibitor activity (ortholog); INVOLVED IN acute-phase response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); anemia (ortholog); atransferrinemia (ortholog); FOUND IN apical cortex (ortholog); extracellular region (ortholog); extracellular space (ortholog) 2 165095405 165097287 + 22301074;30032202 116892297 MODEL JAAIVD010000001;XM_032893906;XM_032893908 XP_032749797;XP_032749799 hepcidin protein-coding 625942044 LOC116885103 U1 spliceosomal RNA 15 53528521 53528669 - 116885103 MODEL JAAIVD010000010 pseudo 625942045 LOC116904596 stabilizer of axonemal microtubules 1-like 1 144239655 144241605 - 22301074;30032202 116904596 MODEL JAAIVD010000025;XM_032907423 XP_032763314 protein-coding 625942050 Ttc9 tetratricopeptide repeat domain 9 INVOLVED IN bone development (ortholog); ASSOCIATED WITH opiate dependence (ortholog) 7 95823263 95858507 + 22301074 116905240 MODEL JAAIVD010000026;XM_032908065 XP_032763956 tetratricopeptide repeat protein 9A protein-coding 625942057 LOC116889943 olfactory receptor 6C76-like 1 161338428 161339393 - 116889943 MODEL JAAIVD010000025 pseudo 625942058 Mepce methylphosphate capping enzyme ENCODES a protein that exhibits 7SK snRNA binding (ortholog); RNA 5'-gamma-phosphate methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); positive regulation of protein localization to Cajal body (ortholog); FOUND IN 7SK snRNP (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) 16 16236753 16241479 + 30032202 116885433 MODEL JAAIVD010000004;XM_032886718 XP_032742609 7SK snRNA methylphosphate capping enzyme protein-coding 625942066 Zbtb8os zinc finger and BTB domain containing 8 opposite strand INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN tRNA-splicing ligase complex (ortholog) 1 28802385 28813466 - 30032202 116896164 MODEL JAAIVD010000025;XM_032897196 XP_032753087 protein archease protein-coding 625942077 LOC116900124 olfactory receptor 50-like 5 14378306 14379247 + 22301074;30032202 116900124 MODEL JAAIVD010000023;XM_032901898 XP_032757789 protein-coding 625942081 Entpd4 ectonucleoside triphosphate diphosphohydrolase 4 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); CTPase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN CTP metabolic process (ortholog); GDP catabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); FOUND IN autophagosome membrane (ortholog); Golgi membrane (ortholog) 12 54746463 54773504 - 30032202 116913143 MODEL JAAIVD010000007;XM_032917346;XM_032917347;XM_032917348 XP_032773237;XP_032773238;XP_032773239 protein-coding 625942103 Ralgps2 Ral GEF with PH domain and SH3 binding motif 2 10 36152498 36279236 - 22301074;30032202 116911602 MODEL JAAIVD010000005;XM_032915575;XM_032915576;XM_032915577 XP_032771466;XP_032771467;XP_032771468 ras-specific guanine nucleotide-releasing factor RalGPS2 protein-coding 625942133 LOC116895895 glyceraldehyde-3-phosphate dehydrogenase-like 3 116264141 116265162 + 116895895 MODEL JAAIVD010000012 pseudo 625942134 LOC116895552 uncharacterized LOC116895552 3 122341484 122342542 + 116895552 MODEL JAAIVD010000012;XR_004387287 ncrna 625942138 LOC116898082 mRNA turnover protein 4 homolog 4 92473166 92473871 + 116898082 MODEL JAAIVD010000003 pseudo 625942139 Cenpp centromere protein P FOUND IN inner kinetochore (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 14 68442653 68624415 - 22301074;30032202 116915225 MODEL JAAIVD010000009;XM_032919613 XP_032775504 protein-coding 625942151 LOC116904067 60S ribosomal protein L7-like 1 150447947 150450406 - 22301074;30032202 116904067 MODEL JAAIVD010000025;XM_032906934 XP_032762825 protein-coding 625942160 LOC116910700 small nucleolar RNA SNORA48 9 17910999 17911142 + 116910700 MODEL JAAIVD010000002;XR_004389228 snorna 625942163 Stx2 syntaxin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN acrosome reaction (ortholog); cell differentiation (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 16 24965683 24988392 + 22301074;30032202 116885527 MODEL JAAIVD010000004;XM_032886824 XP_032742715 syntaxin-2 protein-coding 625942178 LOC116912627 ATP synthase F(0) complex subunit C2, mitochondrial-like 11 344728 345191 - 116912627 MODEL JAAIVD010000006 pseudo 625942179 Chst15 carbohydrate sulfotransferase 15 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN hexose biosynthetic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog) 2 69523917 69601461 + 30032202 116891397 MODEL JAAIVD010000001;XM_032892421;XM_032892422 XP_032748312;XP_032748313 protein-coding 625942194 Vcl vinculin ENCODES a protein that exhibits actin binding (ortholog); alpha-catenin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical junction assembly (ortholog); axon extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autism spectrum disorder (ortholog); cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); adherens junction (ortholog) 12 90736617 90826319 + 22301074 116913633 MODEL JAAIVD010000007;XM_032917903;XM_032917904 XP_032773794;XP_032773795 protein-coding 625942223 Chrna1 cholinergic receptor nicotinic alpha 1 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); muscle cell cellular homeostasis (ortholog); musculoskeletal movement (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autistic disorder (ortholog); centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cell surface (ortholog); membrane (ortholog) 5 50921948 50936717 - 22301074;30032202 116900199 MODEL JAAIVD010000023;XM_032901959 XP_032757850 acetylcholine receptor subunit alpha protein-coding 625942236 Opn5 opsin 5 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); G protein-coupled photoreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); cellular response to UV-A (ortholog); entrainment of circadian clock by photoperiod (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 4 93482998 93530750 + 22301074 116898085 MODEL JAAIVD010000003;XM_032899472 XP_032755363 opsin-5 protein-coding 625942245 Sh2d5 SH2 domain containing 5 FOUND IN postsynaptic density (ortholog) 1 19957607 19966883 - 30032202 116893933 MODEL JAAIVD010000025;XM_032895655;XM_032895659;XM_032895663 XP_032751546;XP_032751550;XP_032751554 SH2 domain-containing protein 5 protein-coding 625942266 LOC116887769 U7 small nuclear RNA 18 11283345 11283403 - 116887769 MODEL JAAIVD010000013;XR_004386267 snrna 625942269 Asns asparagine synthetase (glutamine-hydrolyzing) ENCODES a protein that exhibits asparagine synthase (glutamine-hydrolyzing) activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); asparagine biosynthetic process (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Asparagine Synthetase Deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 6 130632673 130650912 + 22301074;30032202 116904085 MODEL JAAIVD010000024;XM_032906952 XP_032762843 asparagine synthetase [glutamine-hydrolyzing] protein-coding 625942285 S100a14 S100 calcium binding protein A14 ENCODES a protein that exhibits chemokine receptor binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); positive regulation of granulocyte chemotaxis (ortholog); positive regulation of monocyte chemotaxis (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 3 63091663 63093745 - 30032202 116896598 MODEL JAAIVD010000012;XM_032897845;XM_032897846 XP_032753736;XP_032753737 protein S100-A14 protein-coding 625942296 Maged2 MAGE family member D2 INVOLVED IN female pregnancy (ortholog); renal sodium ion absorption (ortholog); ASSOCIATED WITH Bartter disease type 5 (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 12165151 12173206 - 30032202 116888736 MODEL JAAIVD010000014;XM_032890027;XM_032890028;XM_032890029;XM_032890030 XP_032745918;XP_032745919;XP_032745920;XP_032745921 melanoma-associated antigen D2 protein-coding 625942321 LOC116898091 exocrine gland-secreted peptide 1-like 4 95268391 95272576 - 22301074 116898091 MODEL JAAIVD010000003;XM_032899478 XP_032755369 protein-coding 625942325 LOC116902757 uncharacterized LOC116902757 6 64207394 64210931 + 116902757 MODEL JAAIVD010000024;XR_004388236 ncrna 625942330 LOC116900754 protein FAM209A-like 5 145527534 145529211 - 116900754 MODEL JAAIVD010000023;XM_032902464 XP_032758355 protein-coding 625942336 Rprd1b regulation of nuclear pre-mRNA domain containing 1B ENCODES a protein that exhibits identical protein binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription preinitiation complex (ortholog) 5 137371811 137417662 + 22301074;30032202 116902234 MODEL JAAIVD010000023;XM_032904642;XM_032904643 XP_032760533;XP_032760534 regulation of nuclear pre-mRNA domain-containing protein 1B protein-coding 625942351 Ahcyl1 adenosylhomocysteinase like 1 ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); enzyme regulator activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); apoptotic process (ortholog); epithelial fluid transport (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 50567922 50602113 + 30032202 116896386 MODEL JAAIVD010000012;XM_032897509;XM_032897510;XM_032897511;XM_032897512 XP_032753400;XP_032753401;XP_032753402;XP_032753403 S-adenosylhomocysteine hydrolase-like protein 1 protein-coding 625942379 Vps37d VPS37D subunit of ESCRT-I ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN ESCRT I complex (ortholog) 16 18959602 18965122 + 30032202 116885715 MODEL JAAIVD010000004;XM_032887023 XP_032742914 vacuolar protein sorting-associated protein 37D protein-coding 625942387 LOC116892134 galactoside 2-alpha-L-fucosyltransferase 2 2 153851238 153870630 + 22301074;30032202 116892134 MODEL JAAIVD010000001;XM_032893623;XR_004386914;XR_004386916;XR_004386917;XR_004386918 XP_032749514 protein-coding 625942406 C17H19orf67 chromosome 17 C19orf67 homolog INVOLVED IN in utero embryonic development (ortholog) 17 16279468 16282623 - 116886508 MODEL JAAIVD010000011;XM_032888016 XP_032743907 UPF0575 protein C19orf67 homolog protein-coding 625942415 LOC116893792 glyceraldehyde-3-phosphate dehydrogenase-like 2 39286622 39287731 + 116893792 MODEL JAAIVD010000001 pseudo 625942416 LOC116906540 60S ribosomal protein L37a-like 8 64603331 64603594 + 22301074 116906540 MODEL JAAIVD010000027;XM_032909238 XP_032765129 protein-coding 625942419 LOC116886028 single-stranded DNA-binding protein, mitochondrial-like 17 44474506 44474927 + 116886028 MODEL JAAIVD010000011 pseudo 625942420 LOC116885389 transcription factor BTF3-like 1 46648417 46648864 - 116885389 MODEL JAAIVD010000025 pseudo 625942421 LOC116899846 small nucleolar RNA SNORA17 4 81317563 81317694 - 116899846 MODEL JAAIVD010000003;XR_004387842 snorna 625942424 LOC116904345 14-3-3 protein zeta/delta-like 6 71842857 71962330 - 116904345 MODEL JAAIVD010000024 pseudo 625942425 LOC116894867 U6 spliceosomal RNA 2 144824080 144824184 + 116894867 MODEL JAAIVD010000001;XR_004387080 snrna 625942428 Ap3s1 adaptor related protein complex 3 subunit sigma 1 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN AP-3 adaptor complex (ortholog); membrane (ortholog); synaptic vesicle (ortholog) 15 40252086 40310935 - 22301074;30032202 116884959 MODEL JAAIVD010000010;XM_032886162;XM_032886163;XM_032886164;XR_004385909 XP_032742053;XP_032742054;XP_032742055 AP-3 complex subunit sigma-1 protein-coding 625942445 LOC116915145 small nucleolar RNA SNORA17 13 12390592 12390725 - 116915145 MODEL JAAIVD010000008;XR_004389815 snorna 625942448 Men1 menin 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to peptide hormone stimulus (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoma (ortholog); adrenal cortical adenoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cleavage furrow (ortholog) 2 1345374 1351292 - 22301074;30032202 116890662 MODEL JAAIVD010000001;XM_032891060;XM_032891061;XM_032891062;XM_032891063 XP_032746951;XP_032746952;XP_032746953;XP_032746954 menin protein-coding 625942471 Iscu iron-sulfur cluster assembly enzyme ENCODES a protein that exhibits ferrous iron binding (ortholog); iron-sulfur cluster chaperone activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); genetic disease (ortholog); myopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog) 16 40196862 40203143 - 22301074;30032202 116885626 MODEL JAAIVD010000004;XM_032886928 XP_032742819 iron-sulfur cluster assembly enzyme ISCU, mitochondrial protein-coding 625942480 Kiss1 KiSS-1 metastasis suppressor ENCODES a protein that exhibits kisspeptin receptor binding (ortholog); INVOLVED IN decidualization (ortholog); G protein-coupled receptor signaling pathway (ortholog); generation of ovulation cycle rhythm (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Delayed Puberty (ortholog); disorder of sexual development (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) 10 2510695 2513170 - 30032202 116911465 MODEL JAAIVD010000005;XM_032915444 XP_032771335 metastasis-suppressor KiSS-1 protein-coding 625942486 Hoxa10 homeobox A10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); male gonad development (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Endometrial Neoplasms (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 88821706 88831357 + 22301074;30032202 116903801 MODEL JAAIVD010000024;XM_032906492;XM_032906493 XP_032762383;XP_032762384 homeobox protein Hox-A10 protein-coding 625942495 LOC116908404 U1 spliceosomal RNA 8 85813659 85813820 + 116908404 MODEL JAAIVD010000027;XR_004388947 snrna 625942498 LOC116883708 prolactin-4A1 14 47072422 47080207 + 22301074;30032202 116883708 MODEL JAAIVD010000009;XM_032884922 XP_032740813 protein-coding 625942507 Mroh6 maestro heat like repeat family member 6 ASSOCIATED WITH intellectual disability (ortholog) 1 248200716 248206266 - 30032202 116912684 MODEL JAAIVD010000025;XM_032916822 XP_032772713 maestro heat-like repeat-containing protein family member 6 protein-coding 625942524 LOC116912919 5S ribosomal RNA 11 12518849 12518967 - 116912919 MODEL JAAIVD010000006;XR_004389492 rrna 625942527 LOC116894942 U1 spliceosomal RNA 2 171376364 171376517 - 116894942 MODEL JAAIVD010000001 pseudo 625942528 Kdm4d lysine demethylase 4D ENCODES a protein that exhibits chromatin DNA binding (ortholog); damaged DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH nephroblastoma (ortholog); FOUND IN nucleus (ortholog); pericentric heterochromatin (ortholog); site of double-strand break (ortholog) 8 10256450 10280650 - 30032202 116907912 MODEL JAAIVD010000027;XM_032911112 XP_032767003 lysine-specific demethylase 4D protein-coding 625942534 LOC116898428 endogenous retrovirus group K member 6 Gag polyprotein-like 4 90930212 90931858 + 22301074 116898428 MODEL JAAIVD010000003;XM_032899706 XP_032755597 protein-coding 625942537 LOC116888136 tubulin gamma-1 chain-like X 106952226 106952964 - 116888136 MODEL JAAIVD010000014 pseudo 625942538 Mcu mitochondrial calcium uniporter ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); uniporter activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN calcium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 18 25296843 25462814 - 30032202 116887244 MODEL JAAIVD010000013;XM_032888810 XP_032744701 calcium uniporter protein, mitochondrial protein-coding 625942550 LOC116888299 ubiquitin-40S ribosomal protein S27a-like X 60554835 60555370 - 22301074;30032202 116888299 MODEL JAAIVD010000014;XM_032889571 XP_032745462 protein-coding 625942555 LOC116883261 protein S100-A11-like 14 74929894 74930530 - 116883261 MODEL JAAIVD010000009 pseudo 625942556 LOC116900112 olfactory receptor 1J4-like 5 13162200 13163138 - 22301074;30032202 116900112 MODEL JAAIVD010000023;XM_032901889 XP_032757780 protein-coding 625942559 Akain1 A-kinase anchor inhibitor 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of protein-containing complex assembly (ortholog); FOUND IN cytosol (ortholog) 4 179028522 179073636 + 116898293 MODEL JAAIVD010000003;XM_032899645 XP_032755536 A-kinase anchor protein inhibitor 1 protein-coding 625942565 Grp gastrin releasing peptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN cellular response to sodium phosphate (ortholog); mast cell degranulation (ortholog); negative regulation of transmission of nerve impulse (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Aortic Calcification (ortholog); cerebrovascular disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); neuron projection (ortholog) 15 65390684 65404274 - 22301074;30032202 116884503 MODEL JAAIVD010000010;XM_032885633 XP_032741524 gastrin-releasing peptide protein-coding 625942572 Ism2 isthmin 2 7 101376226 101394732 - 116906165 MODEL JAAIVD010000026;XM_032909144 XP_032765035 isthmin-2 protein-coding 625942582 LOC116884887 farnesyl pyrophosphate synthase-like 1 39374474 39375229 - 116884887 MODEL JAAIVD010000025 pseudo 625942583 LOC116902657 U6 spliceosomal RNA 5 104295739 104295845 - 116902657 MODEL JAAIVD010000023;XR_004388220 snrna 625942586 Wdr46 WD repeat domain 46 INVOLVED IN ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 18 6948459 6956159 + 22301074;30032202 116887584 MODEL JAAIVD010000013;XM_032889209 XP_032745100 WD repeat-containing protein 46 protein-coding 625942604 LOC116911207 transmembrane epididymal protein 1-like 10 33276444 33277440 - 116911207 MODEL JAAIVD010000005;XM_032915083 XP_032770974 protein-coding 625942609 LOC116888554 SNF-related serine/threonine-protein kinase-like X 122914412 122916569 + 22301074;30032202 116888554 MODEL JAAIVD010000014;XM_032889861 XP_032745752 protein-coding 625942613 Med19 mediator complex subunit 19 PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 5 62060621 62070057 + 22301074;30032202 116901584 MODEL JAAIVD010000023;XM_032903599 XP_032759490 mediator of RNA polymerase II transcription subunit 19 protein-coding 625942622 Top2a DNA topoisomerase II alpha ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); chromatin binding (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); cerebellar granule cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); PARTICIPATES IN doxorubicin pharmacodynamics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); adenoid cystic carcinoma (ortholog); adrenocortical carcinoma (ortholog); FOUND IN centriole (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 9 55420581 55451553 + 22301074;30032202 116909523 MODEL JAAIVD010000002;XM_032913131 XP_032769022 DNA topoisomerase 2-alpha protein-coding 625942661 LOC116897240 60S ribosomal protein L35-like 3 194352276 194352642 - 116897240 MODEL JAAIVD010000012 pseudo 625942662 LOC116897647 U2 spliceosomal RNA 3 177983920 177984097 + 116897647 MODEL JAAIVD010000012 pseudo 625942663 Fgd5 FYVE, RhoGEF and PH domain containing 5 ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 6 54866797 54955445 - 22301074;30032202 116903493 MODEL JAAIVD010000024;XM_032906081 XP_032761972 FYVE, RhoGEF and PH domain-containing protein 5 protein-coding 625942687 LOC116894794 uncharacterized LOC116894794 2 290719 291812 + 116894794 MODEL JAAIVD010000001;XR_004387039 ncrna 625942692 LOC116897655 U4 spliceosomal RNA 3 163468903 163469035 + 116897655 MODEL JAAIVD010000012 pseudo 625942693 LOC116914970 ubiquitin-conjugating enzyme E2 variant 2-like 13 19664912 19665354 + 116914970 MODEL JAAIVD010000008 pseudo 625942694 LOC116883565 histone H2A type 1-F 14 42558005 42558810 + 22301074;30032202 116883565 MODEL JAAIVD010000009;XM_032884746 XP_032740637 protein-coding 625942698 LOC116902486 U6 spliceosomal RNA 5 78640483 78640587 + 116902486 MODEL JAAIVD010000023;XR_004388102 snrna 625942701 Ffar1 free fatty acid receptor 1 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); fatty acid binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 2 165156564 165157547 + 22301074;30032202 116894449 MODEL JAAIVD010000001;XM_032896154 XP_032752045 protein-coding 625942705 LOC116884347 WW domain binding protein 1-like 15 34430512 34431564 - 116884347 MODEL JAAIVD010000010 pseudo 625942706 LOC116895634 elongation factor 1-alpha 1-like 3 175844891 175846407 - 22301074;30032202 116895634 MODEL JAAIVD010000012;XM_032896842 XP_032752733 protein-coding 625942710 LOC116902900 taste receptor type 2 member 39 6 98057351 98058391 - 22301074;30032202 116902900 MODEL JAAIVD010000024;XM_032905228 XP_032761119 protein-coding 625942714 Wnt1 Wnt family member 1 ENCODES a protein that exhibits cytokine activity (ortholog); protein domain specific binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte-dopaminergic neuron signaling (ortholog); bone development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 1 271611676 271615832 + 22301074;30032202 116890244 MODEL JAAIVD010000025;XM_032890972 XP_032746863 proto-oncogene Wnt-1 protein-coding 625942722 Ctns cystinosin, lysosomal cystine transporter ENCODES a protein that exhibits L-cystine transmembrane transporter activity (ortholog); solute:proton symporter activity (ortholog); INVOLVED IN adult walking behavior (ortholog); ATP metabolic process (ortholog); brain development (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Abderhalden-Kaufmann-Lignac Syndrome (ortholog); cystinosis (ortholog); Cystinosis, Late-Onset Juvenile or Adolescent Nephropathic Type (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 9 42313719 42329589 + 30032202 116910285 MODEL JAAIVD010000002;XM_032914157 XP_032770048 cystinosin protein-coding 625942737 LOC116908427 small nucleolar RNA SNORD105 8 17152846 17152929 + 116908427 MODEL JAAIVD010000027;XR_004388959 snorna 625942740 LOC116887434 proteasome subunit beta type-8-like 18 8124731 8126048 - 116887434 MODEL JAAIVD010000013;XR_004386214 pseudo 625942745 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41658010 41658083 - 116884160 MODEL JAAIVD010000009 trna 625942746 Ccdc13 coiled-coil domain containing 13 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); FOUND IN axonemal central pair (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 8 112954600 112996833 - 30032202 116907980 MODEL JAAIVD010000027;XM_032911223 XP_032767114 coiled-coil domain-containing protein 13 protein-coding 625942766 LOC116904156 uncharacterized LOC116904156 6 145271657 145292023 + 116904156 MODEL JAAIVD010000024;XR_004388333 ncrna 625942771 Stk16 serine/threonine kinase 16 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein autophosphorylation (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi-associated vesicle (ortholog) 4 148568261 148571509 + 22301074;30032202 116899526 MODEL JAAIVD010000003;XM_032901393;XM_032901394 XP_032757284;XP_032757285 serine/threonine-protein kinase 16 protein-coding 625942784 LOC116898488 adenosylhomocysteinase-like 4 120871928 120873148 - 116898488 MODEL JAAIVD010000003 pseudo 625942785 LOC116897612 small nucleolar RNA SNORA17 3 97996219 97996334 + 116897612 MODEL JAAIVD010000012 pseudo 625942786 LOC116897646 U2 spliceosomal RNA 3 23656555 23656698 - 116897646 MODEL JAAIVD010000012 pseudo 625942787 Thpo thrombopoietin ENCODES a protein that exhibits cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); cellular response to lipopolysaccharide (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH arteriosclerosis obliterans (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 4 5548779 5553861 - 22301074;30032202;33403676 116898706 MODEL JAAIVD010000003;XM_032899991;XM_032899992;XM_032899993;XM_032899994;XM_032899995;XM_032899996 XP_032755882;XP_032755883;XP_032755884;XP_032755885;XP_032755886;XP_032755887 protein-coding 625942811 LOC116911991 PRAME family member 6-like 11 48559674 48560998 - 116911991 MODEL JAAIVD010000006 pseudo 625942812 Dock9 dedicator of cytokinesis 9 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog) 12 3088206 3344572 + 30032202 116913357 MODEL JAAIVD010000007;XM_032917510;XM_032917512;XM_032917513;XM_032917514;XM_032917515 XP_032773401;XP_032773403;XP_032773404;XP_032773405;XP_032773406 dedicator of cytokinesis protein 9 protein-coding 625942885 LOC116907737 uncharacterized LOC116907737 8 103188025 103189265 + 116907737 MODEL JAAIVD010000027;XR_004388840 ncrna 625942889 Rasa1 RAS p21 protein activator 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); GTPase binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); angiogenesis (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriovenous malformation (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); plasma membrane (ortholog) 3 210773174 210841432 + 22301074 116897317 MODEL JAAIVD010000012;XM_032899073 XP_032754964 ras GTPase-activating protein 1 protein-coding 625942918 LOC116896031 uncharacterized LOC116896031 3 185207579 185208595 - 116896031 MODEL JAAIVD010000012;XM_032897037 XP_032752928 growth/differentiation factor 3 protein-coding 625942922 Bag5 BAG cochaperone 5 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-folding chaperone binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN Golgi organization (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2F (ortholog); genetic disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytosol (ortholog); inclusion body (ortholog); junctional membrane complex (ortholog) 7 129304322 129308117 - 22301074;30032202 116905497 MODEL JAAIVD010000026;XM_032908502;XM_032908503;XM_032908504 XP_032764393;XP_032764394;XP_032764395 BAG family molecular chaperone regulator 5 protein-coding 625942934 LOC116883560 histone H2B type 1-M-like 14 41969149 41970939 - 22301074;30032202 116883560 MODEL JAAIVD010000009;XM_032884741 XP_032740632 protein-coding 625942941 LOC116898353 keratin-associated protein 13-1-like 4 55081587 55082163 - 116898353 MODEL JAAIVD010000003;XM_032899671 XP_032755562 protein-coding 625942945 LOC116905802 M-phase phosphoprotein 6-like 7 94563121 94563605 - 116905802 MODEL JAAIVD010000026 pseudo 625942946 LOC116914355 beta-defensin 11 13 64578600 64585513 - 22301074;30032202 116914355 MODEL JAAIVD010000008;XM_032918569 XP_032774460 protein-coding 625942950 LOC116883703 cathepsin Q-like 14 77170954 77175073 + 30032202 116883703 MODEL JAAIVD010000009;XM_032884918 XP_032740809 protein-coding 625942959 Fgf23 fibroblast growth factor 23 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to interleukin-6 (ortholog); cellular response to leptin stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH autosomal dominant hypophosphatemic rickets (ortholog); calcinosis (ortholog); chronic kidney disease (ortholog); FOUND IN extracellular space (ortholog) 6 20820952 20828685 - 22301074;30032202 116904578 MODEL JAAIVD010000024;XM_032907374 XP_032763265 protein-coding 625942965 Manbal mannosidase beta like 5 136714348 136743738 + 22301074;30032202 116902224 MODEL JAAIVD010000023;XM_032904629 XP_032760520 protein MANBAL protein-coding 625942972 Timm17a translocase of inner mitochondrial membrane 17A ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of protein processing (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 10 408089 419875 + 22301074;30032202 116911314 MODEL JAAIVD010000005;XM_032915229 XP_032771120 mitochondrial import inner membrane translocase subunit Tim17-A protein-coding 625942982 Arl2bp ARF like GTPase 2 binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of tyrosine phosphorylation of STAT protein (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 17 1551900 1561290 + 30032202 116886522 MODEL JAAIVD010000011;XM_032888034 XP_032743925 ADP ribosylation factor like GTPase 2 binding protein;ADP-ribosylation factor-like protein 2-binding protein protein-coding 625942992 Ccnd1 cyclin D1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN E-cadherin signaling pathway; G1/S transition pathway; Notch signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cyclin D1-CDK4 complex (ortholog); cyclin D1-CDK6 complex (ortholog) 2 4796283 4804717 + 30032202 116890816 MODEL JAAIVD010000001;XM_032891312;XM_032891313 XP_032747203;XP_032747204 G1/S-specific cyclin-D1 protein-coding 625943003 Gemin7 gem nuclear organelle associated protein 7 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) 2 171050285 171059736 + 22301074;30032202 116892515 MODEL JAAIVD010000001;XM_032894270;XM_032894271 XP_032750161;XP_032750162 gem-associated protein 7 protein-coding 625943012 LOC116914916 mitochondrial import inner membrane translocase subunit Tim23-like 13 60557273 60558316 - 116914916 MODEL JAAIVD010000008 pseudo 625943013 Dtl denticleless E3 ubiquitin protein ligase adapter ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 10 69627901 69665385 - 22301074;30032202 116911498 MODEL JAAIVD010000005;XM_032915483;XM_032915485;XM_032915486;XM_032915487 XP_032771374;XP_032771376;XP_032771377;XP_032771378 denticleless E3 ubiquitin protein ligase homolog;denticleless protein homolog protein-coding 625943041 LOC116913518 uncharacterized LOC116913518 12 2426646 2428249 - 116913518 MODEL JAAIVD010000007;XR_004389626 ncrna 625943045 Trnp1 TMF1 regulated nuclear protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); neural precursor cell proliferation (ortholog); regulation of cell cycle (ortholog); FOUND IN euchromatin (ortholog); nucleus (ortholog) 1 24742487 24749689 + 30032202 116895191 MODEL JAAIVD010000025;XM_032896536;XM_032896541 XP_032752427;XP_032752432 TMF-regulated nuclear protein 1 protein-coding 625943053 LOC116889853 ubiquitin-conjugating enzyme E2 variant 1-like 1 152970468 152970906 - 30032202 116889853 MODEL JAAIVD010000025;XM_032890681 XP_032746572 protein-coding 625943057 LOC116886509 cytochrome b-245 light chain ENCODES a protein that exhibits electron transfer activity (ortholog); protein heterodimerization activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to gamma radiation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dendrite (ortholog) 17 42064578 42072582 - 22301074;30032202 116886509 MODEL JAAIVD010000011;XM_032888017 XP_032743908 protein-coding 625943067 Nsa2 NSA2 ribosome biogenesis factor ASSOCIATED WITH primary biliary cholangitis (ortholog) 3 199483126 199489247 + 30032202 116897267 MODEL JAAIVD010000012;XM_032898999 XP_032754890 ribosome biogenesis protein NSA2 homolog protein-coding 625943077 LOC116897713 roundabout homolog 2-like 4 66546833 67633031 + 30032202 116897713 MODEL JAAIVD010000003;XM_032899171;XM_032899172 XP_032755062;XP_032755063 protein-coding 625943087 LOC116898490 tubulin beta chain-like 4 121407277 121484895 + 116898490 MODEL JAAIVD010000003 pseudo 625943088 LOC116887783 small nucleolar RNA SNORA24 18 17713567 17713695 - 116887783 MODEL JAAIVD010000013;XR_004386280 snorna 625943091 Vsig4 V-set and immunoglobulin domain containing 4 ENCODES a protein that exhibits complement component C3b binding (ortholog); INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN protein-containing complex (ortholog) X 55171847 55198600 - 30032202 116889306 MODEL JAAIVD010000014;XM_032890428 XP_032746319 V-set and immunoglobulin domain-containing protein 4 protein-coding 625943102 LOC116909638 olfactory receptor 2T29-like 9 39663478 39664440 + 22301074 116909638 MODEL JAAIVD010000002;XM_032913282 XP_032769173 protein-coding 625943105 LOC116899982 60S ribosomal protein L19-like 5 135701948 135702826 + 116899982 MODEL JAAIVD010000023 pseudo 625943106 LOC116913681 uncharacterized LOC116913681 12 52640466 52644421 + 116913681 MODEL JAAIVD010000007;XR_004389636 ncrna 625943110 Ears2 glutamyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); glutamate-tRNA(Gln) ligase activity (ortholog); INVOLVED IN glutamyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for mitochondrial protein translation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 12 (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrion (ortholog) 2 79761035 79788228 + 22301074;30032202 116891559 MODEL JAAIVD010000001;XM_032892736 XP_032748627 probable glutamate--tRNA ligase, mitochondrial protein-coding 625943123 LOC116898037 uncharacterized LOC116898037 4 81918461 81927225 - 116898037 MODEL JAAIVD010000003;XR_004387635 ncrna 625943128 Mtss2 MTSS I-BAR domain containing 2 ENCODES a protein that exhibits actin monomer binding (ortholog); GTPase activator activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); lamellipodium organization (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); intellectual developmental disorder with ocular anomalies and distinctive facial features (ortholog); syndromic intellectual disability (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); lamellipodium (ortholog); plasma membrane (ortholog) 17 30429878 30450367 + 22301074;30032202 116886064 MODEL JAAIVD010000011;XM_032887371;XM_032887372;XM_032887374;XM_032887375;XM_032887376 XP_032743262;XP_032743263;XP_032743265;XP_032743266;XP_032743267 protein MTSS 2 protein-coding 625943160 Rhoq ras homolog family member Q ENCODES a protein that exhibits GBD domain binding (ortholog); GTPase activity (ortholog); profilin binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin filament (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 7 5986533 6022546 - 22301074;30032202 116905755 MODEL JAAIVD010000026;XM_032908723 XP_032764614 rho-related GTP-binding protein RhoQ protein-coding 625943169 Acsm1 acyl-CoA synthetase medium chain family member 1 ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN butanoate metabolic pathway; fatty acid beta degradation pathway; valproic acid pharmacokinetics pathway; ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 82007019 82041579 - 30032202 116893920 MODEL JAAIVD010000001;XM_032895641 XP_032751532 acyl-coenzyme A synthetase ACSM1, mitochondrial protein-coding 625943187 LOC116907300 olfactory receptor 7G2-like 8 14907386 14908345 + 22301074;30032202 116907300 MODEL JAAIVD010000027;XM_032910248 XP_032766139 protein-coding 625943191 Mtarc1 mitochondrial amidoxime reducing component 1 ENCODES a protein that exhibits molybdenum ion binding (ortholog); molybdopterin cofactor binding (ortholog); nitrate reductase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); nitrate metabolic process (ortholog); nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); FOUND IN mitochondrion (ortholog); nitric-oxide synthase complex (ortholog) 10 62952076 62975424 - 22301074;30032202 116911199 MODEL JAAIVD010000005;XM_032915072 XP_032770963 mitochondrial amidoxime-reducing component 1 protein-coding 625943202 LOC116910525 keratin-associated protein 3-1 9 54398759 54399055 - 22301074;30032202 116910525 MODEL JAAIVD010000002;XM_032914429 XP_032770320 protein-coding 625943205 Ccs copper chaperone for superoxide dismutase ENCODES a protein that exhibits copper ion binding (ortholog); enzyme binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Chronic Hepatitis (ortholog); neurodegenerative disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 2 2820039 2841315 + 30032202 116890758 MODEL JAAIVD010000001;XM_032891215 XP_032747106 protein-coding 625943217 LOC116884313 uncharacterized LOC116884313 15 39564781 39585155 - 116884313 MODEL JAAIVD010000010;XR_004385865 ncrna 625943223 Pds5b PDS5 cohesin associated factor B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); mitotic sister chromatid cohesion (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 230314 361958 + 30032202 116885771 MODEL JAAIVD010000004;XM_032887088;XM_032887089;XM_032887090;XM_032887091;XM_032887092;XM_032887093 XP_032742979;XP_032742980;XP_032742981;XP_032742982;XP_032742983;XP_032742984 sister chromatid cohesion protein PDS5 homolog B protein-coding 625943269 LOC116897424 U6 spliceosomal RNA 3 53520881 53520985 + 116897424 MODEL JAAIVD010000012;XR_004387466 snrna 625943272 LOC116904220 uncharacterized LOC116904220 6 154299663 154303342 + 116904220 MODEL JAAIVD010000024;XR_004388335 ncrna 625943276 LOC116887918 ER membrane protein complex subunit 7-like X 57071184 57073572 + 116887918 MODEL JAAIVD010000014 pseudo 625943277 LOC116899344 transcription initiation factor TFIID subunit 9 4 119505293 119506469 + 22301074;30032202 116899344 MODEL JAAIVD010000003;XM_032901032 XP_032756923 protein-coding 625943282 LOC116888559 diphosphoinositol polyphosphate phosphohydrolase 3-alpha X 16591976 16592909 + 30032202 116888559 MODEL JAAIVD010000014;XM_032889865 XP_032745756 protein-coding 625943287 LOC116906901 putative gustatory receptor clone PTE03 8 15205997 15207290 - 22301074;30032202 116906901 MODEL JAAIVD010000027;XM_032909812;XM_032909813 XP_032765703;XP_032765704 protein-coding 625943294 LOC116885955 40S ribosomal protein S12-like 1 3758104 3758577 + 22301074;30032202 116885955 MODEL JAAIVD010000025;XM_032887276 XP_032743167 protein-coding 625943299 Ccnjl cyclin J like ASSOCIATED WITH genetic disease (ortholog) 9 26343497 26400828 + 30032202 116910005 MODEL JAAIVD010000002;XM_032913792 XP_032769683 cyclin-J-like protein protein-coding 625943309 LOC116888842 F-box/LRR-repeat protein 17-like X 126526172 126528723 - 116888842 MODEL JAAIVD010000014;XM_032890112 XP_032746003 protein-coding 625943315 LOC116890411 small nucleolar RNA SNORA73 family 1 25900852 25901055 + 116890411 MODEL JAAIVD010000025;XR_004386612 snorna 625943318 Nsun6 NOP2/Sun RNA methyltransferase 6 ENCODES a protein that exhibits tRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN tRNA C5-cytosine methylation (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 82 (ortholog); Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog) 14 8716904 8755400 + 22301074;30032202 116883158 MODEL JAAIVD010000009;XM_032884181;XM_032884182 XP_032740072;XP_032740073 tRNA (cytosine(72)-C(5))-methyltransferase NSUN6 protein-coding 625943336 LOC116914154 U6atac minor spliceosomal RNA 12 85384887 85385012 - 116914154 MODEL JAAIVD010000007;XR_004389705 snrna 625943339 Aqp8 aquaporin 8 ENCODES a protein that exhibits ammonium channel activity (ortholog); methylammonium channel activity (ortholog); urea channel activity (ortholog); INVOLVED IN ammonium import across plasma membrane (ortholog); ammonium transmembrane transport (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH brain ischemia (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 78396663 78402499 - 22301074;30032202 116891544 MODEL JAAIVD010000001;XM_032892701;XM_032892702 XP_032748592;XP_032748593 aquaporin-8 protein-coding 625943353 LOC116886538 chemokine-like factor 17 12547949 12556536 + 116886538 MODEL JAAIVD010000011;XM_032888057;XM_032888058 XP_032743948;XP_032743949 protein-coding 625943365 Scgn secretagogin, EF-hand calcium binding protein 14 42967682 43004728 - 22301074;30032202 116883860 MODEL JAAIVD010000009;XM_032885128 XP_032741019 secretagogin protein-coding 625943380 LOC116893289 glyceraldehyde-3-phosphate dehydrogenase-like 2 148859553 148860556 + 116893289 MODEL JAAIVD010000001 pseudo 625943381 Tmem143 transmembrane protein 143 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN mitochondrion (ortholog) 2 153602491 153620037 - 30032202 116892116 MODEL JAAIVD010000001;XM_032893595;XM_032893596;XM_032893597;XM_032893598 XP_032749486;XP_032749487;XP_032749488;XP_032749489 protein-coding 625943400 LOC116892798 cellular tumor antigen p53-like 2 186393384 186395049 + 22301074;30032202 116892798 MODEL JAAIVD010000001;XM_032894673 XP_032750564 protein-coding 625943405 Mkrn2os MKRN2 opposite strand 6 31119957 31127625 + 116903381 MODEL JAAIVD010000024;XM_032905873;XM_032905874 XP_032761764;XP_032761765 MKRN2 opposite strand protein protein-coding 625943416 LOC116890989 macrophage-expressed gene 1 protein 2 12479870 12482650 + 30032202 116890989 MODEL JAAIVD010000001;XM_032891663 XP_032747554 protein-coding 625943422 LOC116896264 uncharacterized LOC116896264 3 29479314 29480031 + 116896264 MODEL JAAIVD010000012;XR_004387320 ncrna 625943426 Zdhhc23 zDHHC palmitoyltransferase 23 INVOLVED IN protein localization to plasma membrane (ortholog); protein palmitoylation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog) 4 28860150 28872812 - 30032202 116898857 MODEL JAAIVD010000003;XM_032900219;XM_032900220;XM_032900221;XM_032900222;XM_032900223 XP_032756110;XP_032756111;XP_032756112;XP_032756113;XP_032756114 palmitoyltransferase ZDHHC23;zinc finger DHHC-type palmitoyltransferase 23 protein-coding 625943445 Mcph1 microcephalin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone development (ortholog); cerebral cortex development (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); Developmental Disabilities (ortholog) 13 65504962 65591663 - 22301074;30032202 116914448 MODEL JAAIVD010000008;XM_032918749 XP_032774640 microcephalin protein-coding 625943461 LOC116885108 small nucleolar RNA SNORD58 15 56982875 56982940 - 116885108 MODEL JAAIVD010000010;XR_004385973 snorna 625943464 Gpr12 G protein-coupled receptor 12 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog) 16 7298111 7300215 + 22301074 116885756 MODEL JAAIVD010000004;XM_032887072 XP_032742963 G-protein coupled receptor 12 protein-coding 625943470 Copb2 coat protein complex I subunit beta 2 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN COPI vesicle coat (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 8 89937156 89959290 + 22301074;30032202 116907112 MODEL JAAIVD010000027;XM_032910087 XP_032765978 COPI coat complex subunit beta 2;coatomer subunit beta' protein-coding 625943496 LOC116911535 elongation factor 2-like 10 85664581 85667667 - 116911535 MODEL JAAIVD010000005 pseudo 625943497 Pdcd6ip programmed cell death 6 interacting protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN actomyosin contractile ring assembly (ortholog); bicellular tight junction assembly (ortholog); extracellular exosome biogenesis (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); primary autosomal recessive microcephaly 29 (ortholog); FOUND IN actomyosin (ortholog); cytosol (ortholog); endoplasmic reticulum exit site (ortholog) 8 104517761 104572534 - 22301074;30032202 116907800 MODEL JAAIVD010000027;XM_032910945;XM_032910946 XP_032766836;XP_032766837 programmed cell death 6-interacting protein protein-coding 625943523 LOC116888930 cysteine protease ATG4A-like X 93918090 93924470 - 22301074 116888930 MODEL JAAIVD010000014;XM_032890172 XP_032746063 protein-coding 625943531 Dok2 docking protein 2 ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase adaptor activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); Ras protein signal transduction (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 12 53590922 53603802 - 30032202 116913974 MODEL JAAIVD010000007;XM_032918243;XM_032918245;XM_032918246 XP_032774134;XP_032774136;XP_032774137 protein-coding 625943546 LOC116902087 60S ribosomal protein L19-like 5 129861659 129862230 - 116902087 MODEL JAAIVD010000023 pseudo 625943547 Psd2 pleckstrin and Sec7 domain containing 2 ASSOCIATED WITH pre-malignant neoplasm (ortholog); FOUND IN cleavage furrow (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 15 8362110 8412663 - 22301074 116884481 MODEL JAAIVD010000010;XM_032885598 XP_032741489 PH and SEC7 domain-containing protein 2 protein-coding 625943566 Lrrc57 leucine rich repeat containing 57 ASSOCIATED WITH colorectal cancer (ortholog) 5 98729670 98735327 - 22301074 116901840 MODEL JAAIVD010000023;XM_032904019;XM_032904020;XM_032904021;XM_032904022 XP_032759910;XP_032759911;XP_032759912;XP_032759913 leucine-rich repeat-containing protein 57 protein-coding 625943585 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889663 MODEL JAAIVD010000045 trna 625943586 Deptor DEP domain containing MTOR interacting protein ENCODES a protein that exhibits phosphatidic acid binding (ortholog); protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to nutrient levels (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN lysosomal membrane (ortholog) 1 229525493 229664048 + 22301074 116911566 MODEL JAAIVD010000025;XM_032915557;XM_032915560 XP_032771448;XP_032771451 DEP domain-containing mTOR-interacting protein protein-coding 625943602 LOC116898201 uncharacterized LOC116898201 4 137830310 137835726 - 116898201 MODEL JAAIVD010000003;XR_004387641 ncrna 625943607 LOC116913679 uncharacterized LOC116913679 12 51080126 51084046 - 116913679 MODEL JAAIVD010000007;XR_004389635 ncrna 625943612 Ctps1 CTP synthase 1 ENCODES a protein that exhibits CTP synthase activity (ortholog); identical protein binding (ortholog); protein asparagine deamidase activity (ortholog); INVOLVED IN B cell proliferation (ortholog); CTP biosynthetic process (ortholog); negative regulation of type I interferon production (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH biliary tract benign neoplasm (ortholog); immunodeficiency 24 (ortholog); Nasopharyngeal Neoplasms (ortholog); FOUND IN cytoophidium (ortholog); cytoplasm (ortholog); nucleus (ortholog) 1 36418001 36447006 + 22301074;30032202 116897282 MODEL JAAIVD010000025;XM_032899018 XP_032754909 protein-coding 625943635 LOC116914521 40S ribosomal protein S19-like 13 70632768 70633182 + 116914521 MODEL JAAIVD010000008 pseudo 625943636 LOC116900103 low-density lipoprotein receptor-related protein 1B 5 18551693 18825841 - 22301074 116900103 MODEL JAAIVD010000023;XM_032901881 XP_032757772 protein-coding 625943683 LOC116896194 guanylate-binding protein 1 3 18203454 18219551 - 22301074;30032202 116896194 MODEL JAAIVD010000012;XM_032897242 XP_032753133 protein-coding 625943698 LOC116910052 uncharacterized LOC116910052 9 4125180 4127183 + 116910052 MODEL JAAIVD010000002;XR_004389124 ncrna 625943702 LOC116901005 protein FAM98B-like 5 111143767 111149164 - 116901005 MODEL JAAIVD010000023 pseudo 625943703 Bpi bactericidal permeability increasing protein ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); immune response (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 5 137602082 137628576 + 22301074;30032202 116900730 MODEL JAAIVD010000023;XM_032902437 XP_032758328 bactericidal permeability-increasing protein protein-coding 625943722 Lmo2 LIM domain only 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN embryonic hemopoiesis (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); transcription regulator complex (ortholog) 5 81798224 81810207 + 30032202 116901692 MODEL JAAIVD010000023;XM_032903816;XM_032903817;XM_032903818 XP_032759707;XP_032759708;XP_032759709 rhombotin-2 protein-coding 625943736 Slc12a5 solute carrier family 12 member 5 ENCODES a protein that exhibits ammonium channel activity (ortholog); chloride transmembrane transporter activity (ortholog); potassium:chloride symporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); chemical synaptic transmission (ortholog); chloride transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 34 (ortholog); epilepsy (ortholog); FOUND IN cell periphery (ortholog); dendrite membrane (ortholog); dendritic shaft (ortholog) 5 152960299 153000142 - 22301074;30032202 116902339 MODEL JAAIVD010000023;XM_032904816;XM_032904817 XP_032760707;XP_032760708 protein-coding 625943769 LOC116907908 60S acidic ribosomal protein P0-like 8 110525888 110526864 + 116907908 MODEL JAAIVD010000027 pseudo 625943770 LOC116915195 small nucleolar RNA SNORA32 13 6373882 6374021 - 116915195 MODEL JAAIVD010000008 pseudo 625943771 Atp7b ATPase copper transporting beta ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to copper ion (ortholog); cellular response to manganese ion (ortholog); circadian rhythm (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Anhaptoglobinemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical part of cell (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 13 64361975 64437965 + 22301074 116914417 MODEL JAAIVD010000008;XM_032918678;XM_032918679;XM_032918680 XP_032774569;XP_032774570;XP_032774571 copper-transporting ATPase 2 protein-coding 625943805 LOC116889739 diadenylate cyclase-like 30032202 116889739 MODEL JAAIVD010000072;XM_032890611 XP_032746502 protein-coding 625943806 LOC116887729 small nucleolar RNA SNORA17 18 25532036 25532160 - 116887729 MODEL JAAIVD010000013 pseudo 625943807 LOC116892672 aldehyde dehydrogenase, cytosolic 1-like 2 20725361 20735178 - 30032202 116892672 MODEL JAAIVD010000001;XM_032894500 XP_032750391 protein-coding 625943815 LOC116911201 ornithine aminotransferase, mitochondrial-like 10 94780926 94782436 - 22301074;30032202 116911201 MODEL JAAIVD010000005;XM_032915074 XP_032770965 protein-coding 625943820 Phf19 PHD finger protein 19 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN ESC/E(Z) complex (ortholog) 5 736695 757969 + 30032202 116901106 MODEL JAAIVD010000023;XM_032902670;XM_032902671 XP_032758561;XP_032758562 protein-coding 625943842 Slc7a6os solute carrier family 7 member 6 opposite strand INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH Progressive Myoclonus Epilepsy 12 (ortholog) 17 25937743 25946255 - 30032202 116886208 MODEL JAAIVD010000011;XM_032887596 XP_032743487 probable RNA polymerase II nuclear localization protein SLC7A6OS protein-coding 625943851 Exoc7 exocyst complex component 7 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of mitotic cytokinetic process (ortholog); protein transmembrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH SEIZURES AND BRAIN ATROPHY (ortholog); FOUND IN centriolar satellite (ortholog); growth cone membrane (ortholog); microtubule organizing center (ortholog) 9 67764899 67783371 + 22301074;30032202 116908696 MODEL JAAIVD010000002;XM_032912016;XM_032912017;XM_032912018;XM_032912019;XM_032912020 XP_032767907;XP_032767908;XP_032767909;XP_032767910;XP_032767911 protein-coding 625943881 Pdzd9 PDZ domain containing 9 2 81129078 81137102 + 22301074 116891583 MODEL JAAIVD010000001;XM_032892762 XP_032748653 PDZ domain-containing protein 9 protein-coding 625943888 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 4 137225330 137225403 - 116899953 MODEL JAAIVD010000003 trna 625943889 Hhipl2 HHIP like 2 10 61670900 61690420 + 116911564 MODEL JAAIVD010000005;XM_032915554 XP_032771445 HHIP-like protein 2 protein-coding 625943901 LOC116903301 vomeronasal type-2 receptor 26-like 6 23696817 23732511 + 22301074;30032202 116903301 MODEL JAAIVD010000024;XM_032905725 XP_032761616 protein-coding 625943909 Lim2 lens intrinsic membrane protein 2 INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); cataract (ortholog); cataract 19 multiple types (ortholog); FOUND IN vesicle (ortholog) 2 156042126 156048914 - 22301074;30032202 116894368 MODEL JAAIVD010000001;XM_032896073 XP_032751964 lens fiber membrane intrinsic protein protein-coding 625943918 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 97219317 97219398 - 116902673 MODEL JAAIVD010000023 trna 625943919 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72250758 72250839 - 116914214 MODEL JAAIVD010000007 trna 625943920 Cfap221 cilia and flagella associated protein 221 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); establishment of localization in cell (ortholog); mucociliary clearance (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); Young Syndrome (ortholog); FOUND IN 9+2 motile cilium (ortholog); cytoplasm (ortholog); glial cell projection (ortholog) 10 12491101 12567276 - 30032202 116911494 MODEL JAAIVD010000005;XM_032915478 XP_032771369 cilia- and flagella-associated protein 221 protein-coding 625943948 Tmem107 transmembrane protein 107 INVOLVED IN cilium assembly (ortholog); cilium organization (ortholog); craniofacial suture morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Gitelman syndrome (ortholog); Meckel syndrome 13 (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) 9 48665797 48667954 + 30032202 116910118 MODEL JAAIVD010000002;XM_032913949;XM_032913950;XM_032913951 XP_032769840;XP_032769841;XP_032769842 protein-coding 625943964 LOC116910040 uncharacterized LOC116910040 9 55109828 55113249 - 116910040 MODEL JAAIVD010000002;XR_004389123 ncrna 625943968 Mtrf1l mitochondrial translation release factor 1 like ENCODES a protein that exhibits translation release factor activity (ortholog); translation release factor activity, codon specific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); FOUND IN mitochondrion (ortholog) 2 197046739 197056814 + 22301074 116892874 MODEL JAAIVD010000001;XM_032894781;XM_032894782;XR_004386983 XP_032750672;XP_032750673 mitochondrial translational release factor 1 like;peptide chain release factor 1-like, mitochondrial protein-coding 625943987 LOC116910740 U1 spliceosomal RNA 9 72933553 72933690 + 116910740 MODEL JAAIVD010000002 pseudo 625943988 Snx12 sorting nexin 12 ENCODES a protein that exhibits enzyme binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN negative regulation of early endosome to late endosome transport (ortholog); negative regulation of gene expression (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN early endosome (ortholog) X 59317431 59431899 + 30032202 116889386 MODEL JAAIVD010000014;XM_032890487 XP_032746378 sorting nexin-12 protein-coding 625943997 LOC116906913 olfactory receptor 145-like 8 32328658 32329596 + 22301074;30032202 116906913 MODEL JAAIVD010000027;XM_032909833 XP_032765724 protein-coding 625944001 LOC116905583 zinc finger HIT domain-containing protein 1-like 7 1111171 1111679 + 116905583 MODEL JAAIVD010000026 pseudo 625944002 Taar5 trace amine associated receptor 5 ENCODES a protein that exhibits trace-amine receptor activity (ortholog); trimethylamine receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); sensory perception of chemical stimulus (ortholog); FOUND IN plasma membrane (ortholog) 2 210033193 210034206 + 22301074;30032202 116894667 MODEL JAAIVD010000001;XM_032896370 XP_032752261 trace amine-associated receptor 5 protein-coding 625944005 LOC116904346 cactin-like 6 71982359 72009326 - 116904346 MODEL JAAIVD010000024 pseudo 625944006 Senp3 SUMO specific peptidase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); deSUMOylase activity (ortholog); INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); protein desumoylation (ortholog); FOUND IN MLL1 complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) 9 49284376 49293260 - 30032202 116910473 MODEL JAAIVD010000002;XM_032914345;XM_032914347 XP_032770236;XP_032770238 sentrin-specific protease 3 protein-coding 625944026 LOC116909606 olfactory receptor 1361-like 9 33633360 33634283 + 22301074;30032202 116909606 MODEL JAAIVD010000002;XM_032913228 XP_032769119 protein-coding 625944029 Pan2 poly(A) specific ribonuclease subunit PAN2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN P-body (ortholog); PAN complex (ortholog) 1 155772673 155791148 + 22301074;30032202 116905979 MODEL JAAIVD010000025;XM_032908994 XP_032764885 PAN2-PAN3 deadenylation complex catalytic subunit PAN2 protein-coding 625944059 LOC116909230 sperm motility kinase 4A-like 9 9575157 9576596 + 22301074;30032202 116909230 MODEL JAAIVD010000002;XM_032912733 XP_032768624 protein-coding 625944062 LOC116887534 olfactory receptor 2J3-like 18 11062893 11063828 + 22301074 116887534 MODEL JAAIVD010000013;XM_032889164 XP_032745055 protein-coding 625944065 LOC116886679 ras-related protein Rab-5A 17 14696758 14698569 + 22301074 116886679 MODEL JAAIVD010000011;XM_032888170 XP_032744061 protein-coding 625944070 LOC116902529 small nucleolar RNA SNORD113/SNORD114 family 5 30497726 30497806 - 116902529 MODEL JAAIVD010000023 pseudo 625944071 LOC116888628 L-lactate dehydrogenase A chain-like X 89050715 89051694 + 116888628 MODEL JAAIVD010000014 pseudo 625944072 Avil advillin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); Arp2/3 complex binding (ortholog); INVOLVED IN actin filament organization (ortholog); cilium assembly (ortholog); nervous system development (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); nephrotic syndrome type 2 (ortholog); nephrotic syndrome type 21 (ortholog); FOUND IN actin filament (ortholog); cell projection (ortholog); focal adhesion (ortholog) 1 205432480 205451672 + 22301074;30032202 116909749 MODEL JAAIVD010000025;XM_032913434 XP_032769325 protein-coding 625944096 Tmem108 transmembrane protein 108 INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); dentate gyrus development (ortholog); FOUND IN axon (ortholog); early endosome (ortholog); endosome membrane (ortholog) 8 94782438 95063244 - 30032202 116907420 MODEL JAAIVD010000027;XM_032910380;XM_032910381;XM_032910382;XM_032910383;XM_032910384;XM_032910386 XP_032766271;XP_032766272;XP_032766273;XP_032766274;XP_032766275;XP_032766277 protein-coding 625944117 LOC116892248 meiosis regulator and mRNA stability factor 1-like 2 160311271 160314813 - 116892248 MODEL JAAIVD010000001;XM_032893818 XP_032749709 protein-coding 625944124 LOC116904411 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 6 98898486 98898827 + 116904411 MODEL JAAIVD010000024 pseudo 625944125 LOC116898230 PCNA-associated factor-like 4 148253726 148255118 + 116898230 MODEL JAAIVD010000003 pseudo 625944126 LOC116883414 histone H2A type 4 14 42942929 42943539 + 22301074;30032202 116883414 MODEL JAAIVD010000009;XM_032884542 XP_032740433 protein-coding 625944131 LOC116895350 pancreatic alpha-amylase-like 3 46167585 46176292 + 22301074 116895350 MODEL JAAIVD010000012;XM_032896649;XM_032896650;XM_032896651 XP_032752540;XP_032752541;XP_032752542 alpha-amylase 1-like protein-coding 625944146 LOC116890419 U7 small nuclear RNA 1 124883448 124883510 - 116890419 MODEL JAAIVD010000025;XR_004386619 snrna 625944149 Ror2 receptor tyrosine kinase like orphan receptor 2 ENCODES a protein that exhibits frizzled binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte development (ortholog); BMP signaling pathway (ortholog); bone mineralization (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal recessive Robinow syndrome (ortholog); brachydactyly (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 14 71417974 71589915 - 22301074;30032202 116883462 MODEL JAAIVD010000009;XM_032884611 XP_032740502 tyrosine-protein kinase transmembrane receptor ROR2 protein-coding 625944162 LOC116907678 olfactory receptor 145-like 8 31811458 31812402 + 22301074;30032202 116907678 MODEL JAAIVD010000027;XM_032910773 XP_032766664 protein-coding 625944165 LOC116884867 protocadherin beta-18 15 1120510 1125166 + 22301074 116884867 MODEL JAAIVD010000010;XM_032886106 XP_032741997 protein-coding 625944170 LOC116889409 melanoma-associated antigen B3-like X 45159686 45160681 - 30032202 116889409 MODEL JAAIVD010000014;XM_032890512 XP_032746403 protein-coding 625944173 Cdk15 cyclin dependent kinase 15 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); PARTICIPATES IN Wnt signaling pathway 4 133151976 133243016 - 22301074;30032202 116898187 MODEL JAAIVD010000003;XM_032899549;XM_032899550;XM_032899551 XP_032755440;XP_032755441;XP_032755442 cyclin-dependent kinase 15 protein-coding 625944194 LOC116898453 heterogeneous nuclear ribonucleoprotein A3-like 4 98448204 98537643 + 116898453 MODEL JAAIVD010000003 pseudo 625944195 Lyrm1 LYR motif containing 1 FOUND IN midbody (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 81761351 81782699 - 30032202 116891592 MODEL JAAIVD010000001;XM_032892778;XM_032892779;XM_032892780;XM_032892781;XM_032892782;XM_032892783;XM_032892784 XP_032748669;XP_032748670;XP_032748671;XP_032748672;XP_032748673;XP_032748674;XP_032748675 LYR motif-containing protein 1 protein-coding 625944223 LOC116889425 U6 spliceosomal RNA X 110075794 110075897 + 116889425 MODEL JAAIVD010000014;XR_004386390 snrna 625944226 LOC116894375 vomeronasal type-2 receptor 116-like 2 156526700 156547777 - 22301074;30032202 116894375 MODEL JAAIVD010000001;XM_032896082;XM_032896083;XM_032896084 XP_032751973;XP_032751974;XP_032751975 protein-coding 625944240 Fastkd2 FAST kinase domains 2 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 44 (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 4 137690640 137710033 + 22301074;30032202 116899448 MODEL JAAIVD010000003;XM_032901219 XP_032757110 FAST kinase domain-containing protein 2, mitochondrial protein-coding 625944256 Mrtfb myocardin related transcription factor B ENCODES a protein that exhibits actin binding (ortholog); DNA-binding transcription factor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel morphogenesis (ortholog); cardiac muscle tissue development (ortholog); ASSOCIATED WITH pervasive developmental disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 9 8318571 8474300 + 30032202 116908874 MODEL JAAIVD010000002;XM_032912318;XM_032912319 XP_032768209;XP_032768210 myocardin-related transcription factor B protein-coding 625944281 Gldn gliomedin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN clustering of voltage-gated sodium channels (ortholog); microvillus organization (ortholog); ASSOCIATED WITH aromatase excess syndrome (ortholog); Contracture (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 8 48361595 48404329 + 30032202 116906926 MODEL JAAIVD010000027;XM_032909853 XP_032765744 protein-coding 625944295 LOC116910931 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 10 61628419 61628894 + 116910931 MODEL JAAIVD010000005 pseudo 625944296 Rap1b RAP1B, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Thrombocytopenia 11 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 195922653 195955305 - 22301074;30032202 116909339 MODEL JAAIVD010000025;XM_032912891;XM_032912896 XP_032768782;XP_032768787 ras-related protein Rap-1b protein-coding 625944311 Sec24b SEC24 homolog B, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); auditory receptor cell morphogenesis (ortholog); auditory receptor cell stereocilium organization (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytosol (ortholog) 3 29242452 29312013 + 22301074;30032202 116896258 MODEL JAAIVD010000012;XM_032897333 XP_032753224 SEC24 homolog B, COPII coat complex component;protein transport protein Sec24B protein-coding 625944339 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 97088978 97089049 - 116895146 MODEL JAAIVD010000001 trna 625944340 LOC116902091 sperm motility kinase-like 5 129872523 129873350 - 22301074;30032202 116902091 MODEL JAAIVD010000023;XM_032904389 XP_032760280 protein-coding 625944346 Dctn4 dynactin subunit 4 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH cystic fibrosis (ortholog); Pseudomonas Infections (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); focal adhesion (ortholog) 15 71390234 71416519 - 22301074;30032202 116884437 MODEL JAAIVD010000010;XM_032885527;XM_032885528 XP_032741418;XP_032741419 protein-coding 625944365 LOC116913552 dual specificity protein phosphatase 13 12 91513132 91522400 - 22301074;30032202 116913552 MODEL JAAIVD010000007;XM_032917758;XM_032917759 XP_032773649;XP_032773650 protein-coding 625944375 LOC116894965 small nucleolar RNA SNORA36 family 2 73210103 73210233 + 116894965 MODEL JAAIVD010000001;XR_004387158 snorna 625944378 LOC116893771 elongation factor 1-beta-like 2 30123775 30124515 + 22301074;30032202 116893771 MODEL JAAIVD010000001;XM_032895472 XP_032751363 protein-coding 625944383 Morc3 MORC family CW-type zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); maintenance of protein location in nucleus (ortholog); negative regulation of fibroblast proliferation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 50771189 50814114 - 22301074;30032202 116898971 MODEL JAAIVD010000003;XM_032900394;XM_032900395 XP_032756285;XP_032756286 MORC family CW-type zinc finger protein 3 protein-coding 625944407 LOC116900739 brain protein I3 5 142438303 142439027 - 116900739 MODEL JAAIVD010000023;XM_032902444 XP_032758335 protein-coding 625944412 LOC116883192 translation initiation factor IF-2-like 14 36759654 36762954 - 116883192 MODEL JAAIVD010000009;XM_032884227 XP_032740118 protein-coding 625944418 LOC116886383 heat shock protein HSP 90-beta-like 17 22946554 22948714 - 116886383 MODEL JAAIVD010000011 pseudo 625944419 LOC116899400 uncharacterized LOC116899400 4 131819875 131876738 - 116899400 MODEL JAAIVD010000003;XR_004387728 ncrna 625944424 LOC116908337 U6 spliceosomal RNA 8 39310499 39310601 - 116908337 MODEL JAAIVD010000027;XR_004388890 snrna 625944427 Atp5f1e ATP synthase F1 subunit epsilon ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Fluoride Poisoning (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 3 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 5 143515096 143518061 + 22301074;30032202 116902265 MODEL JAAIVD010000023;XM_032904684 XP_032760575 ATP synthase subunit epsilon, mitochondrial protein-coding 625944434 Grxcr2 glutaredoxin and cysteine rich domain containing 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 101 (ortholog); Hearing Loss (ortholog); FOUND IN microvillus (ortholog); stereocilium base (ortholog); stereocilium shaft (ortholog) 15 3164544 3178080 - 30032202 116884631 MODEL JAAIVD010000010;XM_032885772 XP_032741663 glutaredoxin domain-containing cysteine-rich protein 2 protein-coding 625944440 Ndufa5 NADH:ubiquinone oxidoreductase subunit A5 INVOLVED IN respiratory electron transport chain (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Facial Nerve Injuries (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 6 114804061 114814033 + 22301074;30032202 116904034 MODEL JAAIVD010000024;XM_032906869 XP_032762760 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5 protein-coding 625944449 LOC116903051 uncharacterized LOC116903051 6 769021 769780 + 30032202 116903051 MODEL JAAIVD010000024;XM_032905351 XP_032761242 uncharacterized protein LOC116903051 protein-coding 625944453 LOC116898394 geminin-like 4 77463727 77464386 + 116898394 MODEL JAAIVD010000003 pseudo 625944454 LOC116914902 transcription factor BTF3-like 13 65067210 65067697 + 116914902 MODEL JAAIVD010000008 pseudo 625944455 Bco2 beta-carotene oxygenase 2 ENCODES a protein that exhibits beta,beta-carotene-9',10'-cleaving oxygenase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN carotene catabolic process (ortholog); carotene metabolic process (ortholog); carotenoid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 8 45003727 45029432 - 30032202 116906727 MODEL JAAIVD010000027;XM_032909537;XM_032909538 XP_032765428;XP_032765429 beta,beta-carotene 9',10'-oxygenase protein-coding 625944474 Zdhhc18 zDHHC palmitoyltransferase 18 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); intracellular protein localization (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 1 24597514 24623868 + 30032202 116895081 MODEL JAAIVD010000025;XM_032896517 XP_032752408 palmitoyltransferase ZDHHC18;zinc finger DHHC-type palmitoyltransferase 18 protein-coding 625944486 LOC116903739 40S ribosomal protein S17-like 6 14320988 14321394 + 116903739 MODEL JAAIVD010000024 pseudo 625944487 LOC116897517 small nucleolar RNA SNORA48 3 170245930 170246060 - 116897517 MODEL JAAIVD010000012 pseudo 625944488 LOC116891978 insulin-like growth factor 1 receptor 2 132112614 132178416 - 22301074;30032202 116891978 MODEL JAAIVD010000001;XM_032893421 XP_032749312 protein-coding 625944511 LOC116889168 cilia- and flagella-associated protein 47-like X 79505887 79541974 - 116889168 MODEL JAAIVD010000014;XM_032890334 XP_032746225 protein-coding 625944521 LOC116906072 Ig heavy chain V region 108A-like 7 62663597 62664047 - 116906072 MODEL JAAIVD010000026 pseudo 625944522 LOC116897321 60S acidic ribosomal protein P0-like 3 211699094 211699929 + 116897321 MODEL JAAIVD010000012 pseudo 625944523 Slc10a4 solute carrier family 10 member 4 ENCODES a protein that exhibits bile acid:sodium symporter activity (ortholog); INVOLVED IN adult behavior (ortholog); regulation of neurotransmitter loading into synaptic vesicle (ortholog); response to xenobiotic stimulus (ortholog); FOUND IN cholinergic synapse (ortholog); dopaminergic synapse (ortholog); plasma membrane (ortholog) 11 29817231 29823262 + 22301074;30032202 116912724 MODEL JAAIVD010000006;XM_032916856 XP_032772747 sodium/bile acid cotransporter 4 protein-coding 625944530 LOC116887971 E3 ubiquitin-protein ligase RLIM X 66538912 66541898 - 30032202 116887971 MODEL JAAIVD010000014;XM_032889410 XP_032745301 protein-coding 625944535 Tifab TIFA inhibitor ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); INVOLVED IN auditory behavior (ortholog); cochlea development (ortholog); cochlea morphogenesis (ortholog) 14 81898205 81899672 + 22301074;30032202 116883457 MODEL JAAIVD010000009;XM_032884604 XP_032740495 TRAF-interacting protein with FHA domain-containing protein B protein-coding 625944541 LOC116884819 60S ribosomal protein L36a-like 15 33833825 33834138 - 116884819 MODEL JAAIVD010000010 pseudo 625944542 LOC116913351 olfactory receptor 11H4-like 12 71079705 71080691 - 22301074 116913351 MODEL JAAIVD010000007;XM_032917507 XP_032773398 protein-coding 625944545 LOC116900259 olfactory receptor 1020 5 63169514 63170467 + 22301074;30032202 116900259 MODEL JAAIVD010000023;XM_032902010 XP_032757901 protein-coding 625944548 LOC116884373 cellular tumor antigen p53-like 15 44941288 44942496 + 116884373 MODEL JAAIVD010000010 pseudo 625944549 LOC116890366 U6 spliceosomal RNA 1 262766246 262766349 + 116890366 MODEL JAAIVD010000025;XR_004386584 snrna 625944552 LOC116907282 protein PTHB1-like 8 16811805 16856767 - 30032202 116907282 MODEL JAAIVD010000027;XM_032910234 XP_032766125 protein-coding 625944558 LOC116901691 uncharacterized LOC116901691 5 81616275 81619439 - 116901691 MODEL JAAIVD010000023;XR_004388010 ncrna 625944564 LOC116895985 60S ribosomal protein L6-like 3 163208539 163234654 + 22301074 116895985 MODEL JAAIVD010000012;XM_032897018 XP_032752909 protein-coding 625944569 LOC116896922 THUMP domain-containing protein 1-like 3 117047101 117048217 + 116896922 MODEL JAAIVD010000012 pseudo 625944570 Pald1 phosphatase domain containing paladin 1 FOUND IN cytosol (ortholog) 18 27156546 27220504 - 116887379 MODEL JAAIVD010000013;XM_032888974 XP_032744865 paladin protein-coding 625944594 Ubtd2 ubiquitin domain containing 2 9 5294539 5360265 + 22301074 116908711 MODEL JAAIVD010000002;XM_032912049 XP_032767940 ubiquitin domain-containing protein 2 protein-coding 625944601 LOC116890576 DNA-(apurinic or apyrimidinic site) lyase-like 1 272944695 272945627 - 116890576 MODEL JAAIVD010000025 pseudo 625944602 Synj2 synaptojanin 2 ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN inositol phosphate catabolic process (ortholog); phosphatidylinositol dephosphorylation (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Meniere's disease (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic microtubule (ortholog); presynapse (ortholog) 2 192777744 192876158 - 22301074;30032202 116892854 MODEL JAAIVD010000001;XM_032894748;XM_032894749 XP_032750639;XP_032750640 synaptojanin-2 protein-coding 625944639 Macf1 microtubule actin crosslinking factor 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cell migration (ortholog); establishment or maintenance of cell polarity (ortholog); Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); ciliary basal body (ortholog) 1 34593741 34916988 + 22301074;30032202 116896994 MODEL JAAIVD010000025;XM_032898600 XP_032754491 microtubule-actin cross-linking factor 1 protein-coding 625944737 Alkbh7 alkB homolog 7 INVOLVED IN DNA damage response (ortholog); fatty acid metabolic process (ortholog); regulation of lipid storage (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 88378362 88380249 + 30032202 116899204 MODEL JAAIVD010000003;XM_032900793 XP_032756684 alpha-ketoglutarate-dependent dioxygenase alkB homolog 7, mitochondrial protein-coding 625944745 Mrpl1 mitochondrial ribosomal protein L1 FOUND IN mitochondrion (ortholog) 11 7982680 8038383 - 22301074 116912271 MODEL JAAIVD010000006;XM_032916260 XP_032772151 39S ribosomal protein L1, mitochondrial protein-coding 625944758 LOC116904267 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like 6 39716862 39720156 - 116904267 MODEL JAAIVD010000024 pseudo 625944759 Cav1 caveolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin-activated signaling pathway (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; reverse cholesterol transport pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acoustic neuroma (ortholog); Acute Lung Injury (ortholog); FOUND IN acrosomal membrane (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 6 121625973 121658196 - 22301074;30032202 116904061 MODEL JAAIVD010000024;XM_032906921;XM_032906922 XP_032762812;XP_032762813 caveolin-1 protein-coding 625944769 LOC116895175 poly(rC)-binding protein 2-like 3 89506673 89507419 - 116895175 MODEL JAAIVD010000012 pseudo 625944770 LOC116904351 developmental pluripotency-associated protein 2-like 6 75027461 75029789 - 116904351 MODEL JAAIVD010000024 pseudo 625944771 LOC116894561 vomeronasal type-1 receptor 1-like 2 178433228 178434181 + 116894561 MODEL JAAIVD010000001 pseudo 625944772 LOC116912867 U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 1 11 93917474 93919919 - 22301074;30032202 116912867 MODEL JAAIVD010000006;XM_032917085 XP_032772976 protein-coding 625944777 LOC116892819 60S ribosomal protein L19-like 2 190297043 190297702 - 116892819 MODEL JAAIVD010000001 pseudo 625944778 LOC116895483 arylacetamide deacetylase-like 2 3 95228928 95258213 - 22301074 116895483 MODEL JAAIVD010000012;XM_032896744 XP_032752635 protein-coding 625944786 LOC116888917 40S ribosomal protein S9-like X 94118645 94119231 - 116888917 MODEL JAAIVD010000014 pseudo 625944787 LOC116885102 small nucleolar RNA SNORA62/SNORA6 family 15 11567222 11567377 + 116885102 MODEL JAAIVD010000010;XR_004385968 snorna 625944790 Taf5 TATA-box binding protein associated factor 5 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN actin cytoskeleton (ortholog); chromatin (ortholog); nucleolus (ortholog) 2 46600808 46616695 + 22301074;30032202 116891261 MODEL JAAIVD010000001;XM_032892146 XP_032748037 transcription initiation factor TFIID subunit 5 protein-coding 625944805 LOC116904695 U1 spliceosomal RNA 6 74039070 74039225 - 116904695 MODEL JAAIVD010000024;XR_004388391 snrna 625944808 LOC116889728 elongation factor P-like 22301074;30032202 116889728 MODEL JAAIVD010000065;XM_032890603 XP_032746494 protein-coding 625944809 Acsl5 acyl-CoA synthetase long chain family member 5 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); oleoyl-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH Diarrhea 13 (ortholog); Experimental Arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 2 60864899 60907301 - 30032202 116891344 MODEL JAAIVD010000001;XM_032892336 XP_032748227 long-chain-fatty-acid--CoA ligase 5 protein-coding 625944835 Exoc5 exocyst complex component 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN epithelial cell apoptotic process (ortholog); establishment of planar polarity (ortholog); homeostasis of number of cells within a tissue (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH obstructive nephropathy (ortholog) 12 73985132 74031698 + 30032202 116913881 MODEL JAAIVD010000007;XM_032918169 XP_032774060 protein-coding 625944857 LOC116884281 protocadherin-3-like 15 940419 943664 + 22301074 116884281 MODEL JAAIVD010000010;XM_032885364 XP_032741255 protein-coding 625944862 LOC116910272 retinol dehydrogenase 7-like 1 206207503 206210440 + 116910272 MODEL JAAIVD010000025;XM_032914153 XP_032770044 protein-coding 625944869 LOC116904253 DAZ-associated protein 2-like 6 28911366 28994693 + 116904253 MODEL JAAIVD010000024 pseudo 625944870 LOC116888512 uncharacterized LOC116888512 X 36707306 36708540 - 116888512 MODEL JAAIVD010000014 pseudo 625944871 Spata2l spermatogenesis associated 2 like ASSOCIATED WITH Fanconi anemia (ortholog) 17 42839935 42844132 - 30032202 116886129 MODEL JAAIVD010000011;XM_032887470 XP_032743361 spermatogenesis-associated protein 2-like protein protein-coding 625944878 LOC116886988 sperm motility kinase X-like 18 48913547 48954625 - 116886988 MODEL JAAIVD010000013 pseudo 625944879 LOC116906081 ADP-ribosylation factor-like protein 1 7 64966501 64972035 - 116906081 MODEL JAAIVD010000026 pseudo 625944880 Tspan9 tetraspanin 9 INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); FOUND IN membrane (ortholog); migrasome (ortholog); plasma membrane (ortholog) 6 19761734 19942461 + 22301074;30032202 116903229 MODEL JAAIVD010000024;XM_032905601;XM_032905602;XM_032905603;XM_032905605;XM_032905606 XP_032761492;XP_032761493;XP_032761494;XP_032761496;XP_032761497 tetraspanin-9 protein-coding 625944904 LOC116895284 protein transport protein Sec61 subunit beta-like 3 10417618 10417908 - 116895284 MODEL JAAIVD010000012 pseudo 625944905 LOC116913562 40S ribosomal protein S19-like 12 78230239 78230721 + 22301074;30032202 116913562 MODEL JAAIVD010000007;XM_032917773;XM_032917774 XP_032773664;XP_032773665 protein-coding 625944913 Polr3d RNA polymerase III subunit D ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 12 53911334 53916110 + 22301074;30032202 116913708 MODEL JAAIVD010000007;XM_032918004;XM_032918005 XP_032773895;XP_032773896 DNA-directed RNA polymerase III subunit RPC4 protein-coding 625944930 Sorbs2 sorbin and SH3 domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cell growth involved in cardiac muscle cell development (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 13 42053330 42142010 - 22301074;30032202 116914285 MODEL JAAIVD010000008;XM_032918510;XM_032918511;XM_032918512;XM_032918513;XM_032918514;XM_032918515;XM_032918516 XP_032774401;XP_032774402;XP_032774403;XP_032774404;XP_032774405;XP_032774406;XP_032774407 sorbin and SH3 domain-containing protein 2 protein-coding 625944971 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48709806 48709879 + 116910803 MODEL JAAIVD010000002 trna 625944972 LOC116913524 uncharacterized LOC116913524 12 20899140 20902296 - 116913524 MODEL JAAIVD010000007;XR_004389627 ncrna 625944977 Spns1 SPNS lysolipid transporter 1, lysophospholipid INVOLVED IN lysophospholipid transport (ortholog); phospholipid efflux (ortholog); regulation of lysosomal lumen pH (ortholog); ASSOCIATED WITH pneumoconiosis (ortholog); FOUND IN lysosome (ortholog) 2 75557083 75564438 + 22301074;30032202 116891529 MODEL JAAIVD010000001;XM_032892678 XP_032748569 protein spinster homolog 1;sphingolipid transporter 1 (putative) protein-coding 625944993 Mixl1 Mix paired-like homeobox ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration involved in gastrulation (ortholog); digestive tract development (ortholog); endoderm development (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 59017923 59020200 - 30032202 116911790 MODEL JAAIVD010000005;XM_032915784;XM_032915785 XP_032771675;XP_032771676 homeobox protein MIXL1 protein-coding 625944999 Tap1 transporter 1, ATP binding cassette subfamily B member ENCODES a protein that exhibits ABC-type peptide antigen transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); cytosol to endoplasmic reticulum transport (ortholog); defense response (ortholog); ASSOCIATED WITH allergic disease (ortholog); ankylosing spondylitis (ortholog); asthma (ortholog); FOUND IN centriolar satellite (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 18 8088841 8139516 - 22301074;30032202 116887405 MODEL JAAIVD010000013;XM_032889000 XP_032744891 antigen peptide transporter 1 protein-coding 625945014 Scap SREBF chaperone ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); immune response (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); protein-containing complex (ortholog) 8 100917024 100971073 + 22301074;30032202 116907667 MODEL JAAIVD010000027;XM_032910760;XM_032910761 XP_032766651;XP_032766652 sterol regulatory element-binding protein cleavage-activating protein protein-coding 625945043 LOC116903327 cat eye syndrome critical region protein 2 homolog ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); cochlea development (ortholog); execution phase of apoptosis (ortholog); ASSOCIATED WITH anencephaly (ortholog); neural tube defect (ortholog); FOUND IN CERF complex (ortholog); euchromatin (ortholog); ISWI-type complex (ortholog) 6 25974461 26086913 - 22301074;30032202 116903327 MODEL JAAIVD010000024;XM_032905768;XM_032905769;XM_032905770 XP_032761659;XP_032761660;XP_032761661 protein-coding 625945069 LOC116894139 olfactory receptor 56A3 2 104030881 104031828 + 22301074 116894139 MODEL JAAIVD010000001;XM_032895857 XP_032751748 protein-coding 625945072 Gnpnat1 glucosamine-phosphate N-acetyltransferase 1 ENCODES a protein that exhibits glucosamine 6-phosphate N-acetyltransferase activity (ortholog); identical protein binding (ortholog); monosaccharide binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glucosamine metabolic process (ortholog); liver development (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; amino sugar metabolic pathway; french type sialuria pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); RHIZOMELIC DYSPLASIA, AIN-NAZ TYPE (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) 12 77642652 77653825 + 30032202 116914056 MODEL JAAIVD010000007;XM_032918340;XM_032918341 XP_032774231;XP_032774232 glucosamine 6-phosphate N-acetyltransferase protein-coding 625945085 Mlst8 MTOR associated protein MLST8 ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of actin filament polymerization (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; FOUND IN cytoplasm (ortholog); serine/threonine protein kinase complex (ortholog); TORC1 complex (ortholog) 9 1758322 1764046 - 22301074;30032202 116910469 MODEL JAAIVD010000002;XM_032914341;XM_032914342 XP_032770232;XP_032770233 MTOR associated protein, LST8 homolog;target of rapamycin complex subunit LST8 protein-coding 625945101 LOC116894556 olfactory receptor 49-like 2 177901982 177902956 - 22301074;30032202 116894556 MODEL JAAIVD010000001;XM_032896265 XP_032752156 protein-coding 625945104 Eva1a eva-1 homolog A, regulator of programmed cell death INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); cardiac left ventricle morphogenesis (ortholog); FOUND IN plasma membrane (ortholog) 6 64033381 64055017 - 116903651 MODEL JAAIVD010000024;XM_032906307 XP_032762198 protein eva-1 homolog A protein-coding 625945110 Zswim4 zinc finger SWIM-type containing 4 17 16055775 16081025 + 22301074;30032202 116886240 MODEL JAAIVD010000011;XM_032887651 XP_032743542 zinc finger SWIM domain-containing protein 4 protein-coding 625945128 Mfap3 microfibril associated protein 3 9 40698376 40712838 - 116908633 MODEL JAAIVD010000002;XM_032911887;XM_032911888 XP_032767778;XP_032767779 microfibril-associated glycoprotein 3 protein-coding 625945140 Hyal3 hyaluronidase 3 ENCODES a protein that exhibits hyaluronoglucuronidase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) 8 98898131 98903767 + 22301074;30032202 116907531 MODEL JAAIVD010000027;XM_032910546;XM_032910547 XP_032766437;XP_032766438 hyaluronidase-3 protein-coding 625945153 LOC116884278 protocadherin beta-4-like 15 970212 973858 + 22301074 116884278 MODEL JAAIVD010000010;XM_032885361 XP_032741252 protein-coding 625945158 LOC116904785 small nucleolar RNA SNORD93 6 153080700 153080770 + 116904785 MODEL JAAIVD010000024;XR_004388449 snorna 625945161 LOC116890314 U4 spliceosomal RNA 1 246489293 246489455 + 116890314 MODEL JAAIVD010000025 pseudo 625945162 LOC116900552 olfactory receptor 4K3-like 5 89861577 89862518 - 22301074 116900552 MODEL JAAIVD010000023;XM_032902278 XP_032758169 protein-coding 625945165 Prkce protein kinase C epsilon ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); actin monomer binding (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 6320026 6806544 - 22301074 116905760 MODEL JAAIVD010000026;XM_032908730 XP_032764621 protein kinase C epsilon type protein-coding 625945184 Btk Bruton tyrosine kinase ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell receptor signaling pathway (ortholog); cell maturation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Adenoviridae Infections (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) X 86848108 86886678 - 22301074;30032202 116888485 MODEL JAAIVD010000014;XM_032889760 XP_032745651 tyrosine-protein kinase BTK protein-coding 625945207 LOC116907662 glyceraldehyde-3-phosphate dehydrogenase-like 1 157529326 157532301 + 116907662 MODEL JAAIVD010000025 pseudo 625945208 LOC116888937 actin-histidine N-methyltransferase-like X 1589812 1596038 - 116888937 MODEL JAAIVD010000014 pseudo 625945209 Satb2 SATB homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cerebellar ataxia (ortholog); cleft palate (ortholog); FOUND IN histone deacetylase complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 131230727 131414564 - 30032202 116899398 MODEL JAAIVD010000003;XM_032901122;XM_032901123;XM_032901124;XM_032901125;XM_032901126;XM_032901128;XM_032901129 XP_032757013;XP_032757014;XP_032757015;XP_032757016;XP_032757017;XP_032757019;XP_032757020 DNA-binding protein SATB2 protein-coding 625945243 Gprasp3 G protein-coupled receptor associated sorting protein family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of neuron apoptotic process (ortholog); positive regulation of dendritic spine morphogenesis (ortholog) X 87606361 87611439 + 116888593 MODEL JAAIVD010000014;XM_032889892 XP_032745783 Bhlhb9 basic helix-loop-helix family member b9;protein BHLHb9 protein-coding 625945252 LOC116886723 5S ribosomal RNA 17 43148515 43148633 - 116886723 MODEL JAAIVD010000011;XR_004386135 rrna 625945255 Spmip6 sperm microtubule inner protein 6 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); protein-containing complex assembly (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 4032064 4044996 + 30032202 116891353 MODEL JAAIVD010000025;XM_032892350;XM_032892358 XP_032748241;XP_032748249 C1H9orf24 chromosome 1 C9orf24 homolog;spermatid-specific manchette-related protein 1 protein-coding 625945272 Fuca1 alpha-L-fucosidase 1 ENCODES a protein that exhibits alpha-L-fucosidase activity (ortholog); carbohydrate binding (ortholog); fucosidase activity (ortholog); INVOLVED IN fucose metabolic process (ortholog); glycoside catabolic process (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); diabetic retinopathy (ortholog) 1 22291051 22309016 - 22301074;30032202 116894501 MODEL JAAIVD010000025;XM_032896209 XP_032752100 tissue alpha-L-fucosidase protein-coding 625945284 LOC116906578 putative gustatory receptor clone PTE38 8 15848495 15849436 - 116906578 MODEL JAAIVD010000027 pseudo 625945285 Hs2st1 heparan sulfate 2-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 2-sulfotransferase activity (ortholog); INVOLVED IN gene expression (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); heparin proteoglycan metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEUROFACIOSKELETAL SYNDROME WITH OR WITHOUT RENAL AGENESIS (ortholog); FOUND IN Golgi apparatus (ortholog) 3 16147570 16287826 + 22301074;30032202 116896189 MODEL JAAIVD010000012;XM_032897235 XP_032753126 protein-coding 625945296 LOC116902719 MICOS complex subunit Mic26-like 6 52218756 52219343 - 22301074;30032202 116902719 MODEL JAAIVD010000024;XM_032905070 XP_032760961 protein-coding 625945299 Gap43 growth associated protein 43 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); Experimental Seizures (ortholog); Hearing Loss, Noise-Induced (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 4 27176383 27270177 - 22301074;30032202 116898853 MODEL JAAIVD010000003;XM_032900206 XP_032756097 neuromodulin protein-coding 625945306 Rnd2 Rho family GTPase 2 INVOLVED IN positive regulation of collateral sprouting (ortholog); FOUND IN early endosome (ortholog) 9 60756892 60760347 + 22301074;30032202 116909924 MODEL JAAIVD010000002;XM_032913689 XP_032769580 rho-related GTP-binding protein RhoN protein-coding 625945315 LOC116893520 tyrosine-protein kinase Yes-like 2 195985413 195989135 - 116893520 MODEL JAAIVD010000001 pseudo 625945316 Mtg2 mitochondrial ribosome associated GTPase 2 ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); regulation of mitochondrial translation (ortholog); regulation of respiratory system process (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog) 5 157155994 157169953 + 22301074;30032202 116902401 MODEL JAAIVD010000023;XM_032904925;XM_032904926;XM_032904927;XM_032904928 XP_032760816;XP_032760817;XP_032760818;XP_032760819 mitochondrial ribosome-associated GTPase 2 protein-coding 625945337 Akap19 A-kinase anchoring protein 19 ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog) 4 122408802 122411911 + 22301074;30032202 116899366 MODEL JAAIVD010000003;XM_032901074 XP_032756965 C4H2orf88 chromosome 4 C2orf88 homolog;small membrane A-kinase anchor protein protein-coding 625945343 LOC116910576 olfactory receptor 1D2-like 9 93103817 93104752 + 22301074 116910576 MODEL JAAIVD010000002;XM_032914500 XP_032770391 protein-coding 625945346 Hsd3b7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7 ENCODES a protein that exhibits cholest-5-ene-3-beta,7-alpha-diol 3-beta-dehydrogenase activity (ortholog); INVOLVED IN B cell chemotaxis (ortholog); cholesterol catabolic process (ortholog); liver regeneration (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH cholestasis (ortholog); congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 1 (ortholog); FOUND IN lipid droplet (ortholog) 2 74100866 74104495 - 22301074 116891457 MODEL JAAIVD010000001;XM_032892537;XM_032892538 XP_032748428;XP_032748429 3 beta-hydroxysteroid dehydrogenase type 7 protein-coding 625945359 Tgds TDP-glucose 4,6-dehydratase ASSOCIATED WITH Catel Manzke syndrome (ortholog); genetic disease (ortholog) 12 7806710 7827250 + 22301074;30032202 116913507 MODEL JAAIVD010000007;XM_032917711 XP_032773602 dTDP-D-glucose 4,6-dehydratase protein-coding 625945375 LOC116889717 lon protease-like 22301074;30032202 116889717 MODEL JAAIVD010000061;XM_032890596 XP_032746487 protein-coding 625945376 Baalc BAALC binder of MAP3K1 and KLF4 ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 212234153 212334016 - 22301074;30032202 116910861 MODEL JAAIVD010000025;XM_032914625 XP_032770516 brain and acute leukemia cytoplasmic protein protein-coding 625945383 LOC116907254 uncharacterized LOC116907254 8 92484622 92487145 + 116907254 MODEL JAAIVD010000027;XR_004388814 ncrna 625945388 Eps8l3 EPS8 signaling adaptor L3 ENCODES a protein that exhibits actin filament binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of hair cycle (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hypotrichosis 5 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 3 50373284 50386445 - 30032202 116896384 MODEL JAAIVD010000012;XM_032897504;XM_032897505 XP_032753395;XP_032753396 EPS8 like 3;epidermal growth factor receptor kinase substrate 8-like protein 3 protein-coding 625945413 LOC116898392 voltage-dependent anion-selective channel protein 1-like 4 76053473 76112332 - 22301074;30032202 116898392 MODEL JAAIVD010000003;XM_032899686 XP_032755577 protein-coding 625945420 LOC116888328 uncharacterized LOC116888328 X 40972099 40974988 - 116888328 MODEL JAAIVD010000014;XR_004386303 ncrna 625945424 Osbpl2 oxysterol binding protein like 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN cholesterol transport (ortholog); intracellular cholesterol transport (ortholog); phospholipid transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 67 (ortholog); genetic disease (ortholog); status epilepticus (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 5 157200317 157245079 + 30032202 116902403 MODEL JAAIVD010000023;XM_032904932;XM_032904933 XP_032760823;XP_032760824 oxysterol-binding protein-related protein 2 protein-coding 625945445 Kctd12 potassium channel tetramerization domain containing 12 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic active zone membrane (ortholog) 12 22157698 22159740 - 22301074;30032202 116913798 MODEL JAAIVD010000007;XM_032918104 XP_032773995 BTB/POZ domain-containing protein KCTD12 protein-coding 625945450 Ano4 anoctamin 4 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); endometriosis (ortholog); generalized epilepsy with febrile seizures plus (ortholog); FOUND IN plasma membrane (ortholog) 1 167983194 168381453 - 22301074;30032202 116907828 MODEL JAAIVD010000025;XM_032911017;XM_032911022;XM_032911030;XM_032911037 XP_032766908;XP_032766913;XP_032766921;XP_032766928 anoctamin-4 protein-coding 625945489 LOC116888255 peptidyl-prolyl cis-trans isomerase H-like X 90121187 90121662 - 116888255 MODEL JAAIVD010000014 pseudo 625945490 Gja4 gap junction protein alpha 4 INVOLVED IN blood vessel development (ortholog); calcium ion transport (ortholog); cell-cell signaling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); coronary artery disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog) 1 30970791 30973341 + 22301074;30032202 116886969 MODEL JAAIVD010000025;XM_032888464 XP_032744355 gap junction alpha-4 protein protein-coding 625945496 LOC116895943 ubiquitin-conjugating enzyme E2 E1-like 3 133936977 133937555 + 116895943 MODEL JAAIVD010000012 pseudo 625945497 Gpr4 G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiogenesis involved in wound healing (ortholog); cellular response to acidic pH (ortholog); FOUND IN plasma membrane (ortholog) 2 171395258 171406155 - 22301074 116892544 MODEL JAAIVD010000001;XM_032894309 XP_032750200 G-protein coupled receptor 4 protein-coding 625945503 LOC116888161 39S ribosomal protein L30, mitochondrial-like X 114908225 114908707 + 116888161 MODEL JAAIVD010000014 pseudo 625945504 Mcrip1 MAPK regulated corepressor interacting protein 1 INVOLVED IN gene expression (ortholog); negative regulation of gene expression, epigenetic (ortholog); regulation of epithelial to mesenchymal transition (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleus (ortholog) 9 63471241 63478593 + 116909457 MODEL JAAIVD010000002;XM_032913038;XM_032913040 XP_032768929;XP_032768931 mapk-regulated corepressor-interacting protein 1 protein-coding 625945516 Pign phosphatidylinositol glycan anchor biosynthesis class N ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); choreatic disease (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 10 90065762 90214623 + 22301074;30032202 116911062 MODEL JAAIVD010000005;XM_032914828 XP_032770719 GPI ethanolamine phosphate transferase 1 protein-coding 625945551 Angel2 angel homolog 2 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA 2',3'-cyclic phosphatase activity (ortholog); RNA 2'-phosphatase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mitochondrial mRNA 3'-end processing (ortholog); negative regulation of mitotic cell cycle (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) 10 69018029 69037059 + 30032202 116910881 MODEL JAAIVD010000005;XM_032914651;XM_032914652;XM_032914653;XM_032914654;XM_032914655 XP_032770542;XP_032770543;XP_032770544;XP_032770545;XP_032770546 protein angel homolog 2 protein-coding 625945577 Sec16b SEC16 homolog B, endoplasmic reticulum export factor INVOLVED IN endoplasmic reticulum organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); peroxisome fission (ortholog); ASSOCIATED WITH Body Weight (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog) 10 36873168 36911995 + 30032202 116911405 MODEL JAAIVD010000005;XM_032915366 XP_032771257 protein transport protein Sec16B protein-coding 625945606 Dbp D-box binding PAR bZIP transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN liver development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH osteoporosis (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 2 153811024 153816005 - 30032202 116892128 MODEL JAAIVD010000001;XM_032893615 XP_032749506 D site-binding protein protein-coding 625945614 Hsd17b14 hydroxysteroid 17-beta dehydrogenase 14 ENCODES a protein that exhibits D-threo-aldose 1-dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN L-fucose catabolic process (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN cytosol (ortholog) 2 153949022 153959655 - 30032202 116892143 MODEL JAAIVD010000001;XM_032893633 XP_032749524 17-beta-hydroxysteroid dehydrogenase 14 protein-coding 625945626 LOC116896253 zinc finger protein 728-like 3 28424874 28428547 + 30032202 116896253 MODEL JAAIVD010000012;XM_032897325 XP_032753216 protein-coding 625945633 LOC116894726 TD and POZ domain-containing protein 4-like 2 41920555 41921635 - 116894726 MODEL JAAIVD010000001 pseudo 625945634 Dtx4 deltex E3 ubiquitin ligase 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); innate immune response (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN centrosome (ortholog) 2 12488458 12520110 - 22301074;30032202 116890992 MODEL JAAIVD010000001;XM_032891666;XM_032891667 XP_032747557;XP_032747558 E3 ubiquitin-protein ligase DTX4 protein-coding 625945651 LOC116911576 60S ribosomal protein L29-like 10 46428166 46428687 + 116911576 MODEL JAAIVD010000005 pseudo 625945652 Flywch2 FLYWCH family member 2 9 1081564 1090134 - 116908691 MODEL JAAIVD010000002;XM_032912006;XM_032912008;XR_004389012 XP_032767897;XP_032767899 protein-coding 625945666 Frey1 Frey regulator of sperm-oocyte fusion 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); gene expression (ortholog); intracellular calcium ion homeostasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 66521120 66521885 + 116901642 MODEL JAAIVD010000023;XM_032903742 XP_032759633 C5H11orf94 chromosome 5 C11orf94 homolog;uncharacterized protein C11orf94 homolog protein-coding 625945672 Acox2 acyl-CoA oxidase 2 ENCODES a protein that exhibits 3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity (ortholog); fatty acid binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH congenital bile acid synthesis defect 6 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) 12 78649219 78678557 - 22301074;30032202 116913597 MODEL JAAIVD010000007;XM_032917847 XP_032773738 peroxisomal acyl-coenzyme A oxidase 2 protein-coding 625945689 LOC116897596 small nucleolar RNA SNORA17 3 7586788 7586910 - 116897596 MODEL JAAIVD010000012 pseudo 625945690 Atp4a ATPase H+/K+ transporting subunit alpha ENCODES a protein that exhibits magnesium ion binding (ortholog); P-type potassium:proton transporter activity (ortholog); potassium ion binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); regulation of proton transport (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH stomach cancer (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); potassium:proton exchanging ATPase complex (ortholog) 2 165291205 165303726 - 22301074;30032202 116892303 MODEL JAAIVD010000001;XM_032893920;XM_032893921 XP_032749811;XP_032749812 potassium-transporting ATPase alpha chain 1 protein-coding 625945717 Bex4 brain expressed X-linked 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone deacetylase binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN chromosome segregation (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of tubulin deacetylation (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) X 88129037 88130508 + 30032202 116888490 MODEL JAAIVD010000014;XM_032889762 XP_032745653 protein BEX4 protein-coding 625945724 Sdhaf2 succinate dehydrogenase complex assembly factor 2 INVOLVED IN mitochondrial electron transport, succinate to ubiquinone (ortholog); mitochondrial respiratory chain complex II assembly (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); ovarian cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 2 9970054 9998686 - 22301074;30032202 116890955 MODEL JAAIVD010000001;XM_032891611;XM_032891612;XM_032891613;XR_004386798;XR_004386799 XP_032747502;XP_032747503;XP_032747504 succinate dehydrogenase assembly factor 2, mitochondrial protein-coding 625945747 LOC116913006 small nucleolar RNA SNORA17 11 1187187 1187297 + 116913006 MODEL JAAIVD010000006 pseudo 625945748 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92731074 92731145 - 116904852 MODEL JAAIVD010000024 trna 625945749 LOC116910326 stathmin-like 9 59056288 59056733 + 22301074;30032202 116910326 MODEL JAAIVD010000002;XM_032914186 XP_032770077 protein-coding 625945752 LOC116911577 dnaJ homolog subfamily C member 10-like 10 14529152 14531393 - 116911577 MODEL JAAIVD010000005 pseudo 625945753 Epgn epithelial mitogen ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 11 4432244 4440235 + 30032202 116912469 MODEL JAAIVD010000006;XM_032916537 XP_032772428 epigen protein-coding 625945762 Prf1 perforin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); circadian rhythm (ortholog); defense response to tumor cell (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); asthma (ortholog); autistic disorder (ortholog); FOUND IN cytolytic granule (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 18 27133608 27139550 + 22301074 116887085 MODEL JAAIVD010000013;XM_032888593 XP_032744484 perforin-1 protein-coding 625945769 LOC116902545 small nucleolar RNA SNORA29 5 27265704 27265843 - 116902545 MODEL JAAIVD010000023;XR_004388146 snorna 625945772 Atp2c2 ATPase secretory pathway Ca2+ transporting 2 ENCODES a protein that exhibits P-type calcium transporter activity (ortholog); P-type manganese transporter activity (ortholog); INVOLVED IN mammary gland epithelium development (ortholog); positive regulation of calcium ion import (ortholog); protein localization to plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog); perinuclear region of cytoplasm (ortholog) 17 39344175 39402928 + 22301074;30032202 116886188 MODEL JAAIVD010000011;XM_032887561 XP_032743452 calcium-transporting ATPase type 2C member 2 protein-coding 625945803 Ddhd1 DDHD domain containing 1 INVOLVED IN positive regulation of mitochondrial fission (ortholog); sperm mitochondrion organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog) 12 77377990 77443682 + 22301074;30032202 116913068 MODEL JAAIVD010000007;XM_032917195;XM_032917196;XM_032917197;XM_032917199;XM_032917200;XM_032917201;XM_032917202 XP_032773086;XP_032773087;XP_032773088;XP_032773090;XP_032773091;XP_032773092;XP_032773093 phospholipase DDHD1 protein-coding 625945834 Cavin3 caveolae associated protein 3 ENCODES a protein that exhibits protein kinase C binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); cortical actin cytoskeleton organization (ortholog); negative regulation of fermentation (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); protein-containing complex (ortholog) 2 104312450 104314080 - 30032202 116891817 MODEL JAAIVD010000001;XM_032893173 XP_032749064 caveolae-associated protein 3 protein-coding 625945840 LOC116889484 small nucleolar RNA SNORA29 X 41563679 41563815 - 116889484 MODEL JAAIVD010000014;XR_004386435 snorna 625945843 Shank1 SH3 and multiple ankyrin repeat domains 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); G protein-coupled receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); associative learning (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); excitatory synapse (ortholog) 2 155169457 155216472 - 30032202 116892216 MODEL JAAIVD010000001;XM_032893776 XP_032749667 SH3 and multiple ankyrin repeat domains protein 1 protein-coding 625945871 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92756276 92756347 + 116904842 MODEL JAAIVD010000024 trna 625945872 Muc2 mucin 2, oligomeric mucus/gel-forming ENCODES a protein that exhibits cupric ion binding (ortholog); cuprous ion binding (ortholog); extracellular matrix structural constituent (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); allergic conjunctivitis (ortholog); FOUND IN extracellular matrix (ortholog); inner mucus layer (ortholog); mucus layer (ortholog) 2 7769003 7801010 - 22301074;30032202 116891058 MODEL JAAIVD010000001;XM_032891753 XP_032747644 mucin-2 protein-coding 625945928 Sh3bp5l SH3 binding domain protein 5 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog) 9 39888240 39903071 - 22301074;30032202 116908947 MODEL JAAIVD010000002;XM_032912405;XM_032912406;XM_032912407;XM_032912408 XP_032768296;XP_032768297;XP_032768298;XP_032768299 SH3 domain-binding protein 5-like protein-coding 625945948 C8a complement C8 alpha chain ENCODES a protein that exhibits complement binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH meningitis (ortholog); myocardial infarction (ortholog); Neisseriaceae Infections (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); membrane attack complex (ortholog) 1 49739310 49793983 + 22301074 116887623 MODEL JAAIVD010000025;XM_032889228;XM_032889232 XP_032745119;XP_032745123 complement component C8 alpha chain protein-coding 625945968 LOC116906535 B-cell lymphoma/leukemia 10-like 8 34406438 34407156 - 116906535 MODEL JAAIVD010000027 pseudo 625945969 LOC116901768 uncharacterized LOC116901768 5 94284957 94286058 - 116901768 MODEL JAAIVD010000023;XR_004388022;XR_004388023 ncrna 625945976 LOC116911901 small nucleolar RNA SNORD81 10 40327672 40327748 + 116911901 MODEL JAAIVD010000005;XR_004389408 snorna 625945979 LOC116899059 zinc finger protein 260-like 4 79379032 79415535 - 30032202 116899059 MODEL JAAIVD010000003;XM_032900530 XP_032756421 protein-coding 625945988 Apobr apolipoprotein B receptor ENCODES a protein that exhibits apolipoprotein receptor activity (ortholog); protein homodimerization activity (ortholog); very-low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN triglyceride metabolic process (ortholog); FOUND IN centrosome (ortholog); plasma membrane (ortholog) 2 75336127 75340294 - 30032202 116891519 MODEL JAAIVD010000001;XM_032892657 XP_032748548 protein-coding 625945996 LOC116885895 pumilio homolog 3-like 16 14968644 14987847 - 30032202 116885895 MODEL JAAIVD010000004;XM_032887214 XP_032743105 protein-coding 625946003 LOC116886749 small nucleolar RNA SNORD41 17 15242299 15242368 - 116886749 MODEL JAAIVD010000011;XR_004386152 snorna 625946006 Herc2 HECT and RLD domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits SUMO binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of Notch signaling pathway (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 38 (ortholog); Developmental Disabilities (ortholog); exotropia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 142969120 143150253 - 22301074;30032202 116892042 MODEL JAAIVD010000001;XM_032893506 XP_032749397 E3 ubiquitin-protein ligase HERC2 protein-coding 625946103 LOC116913234 riboflavin kinase-like 12 72696638 72698154 - 116913234 MODEL JAAIVD010000007 pseudo 625946104 LOC116888332 solute carrier family 25 member 39-like X 14281867 14282959 + 116888332 MODEL JAAIVD010000014 pseudo 625946105 Gnai3 G protein subunit alpha i3 ENCODES a protein that exhibits G protein-coupled serotonin receptor binding (ortholog); GDP binding (ortholog); GTPase activating protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cell division (ortholog); GTP metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; endothelin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amnestic disorder (ortholog); Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 50112601 50149733 + 22301074;30032202 116896371 MODEL JAAIVD010000012;XM_032897491 XP_032753382 guanine nucleotide-binding protein G(i) subunit alpha protein-coding 625946118 Rab3il1 RAB3A interacting protein like 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog) 2 151174342 151184526 - 30032202 116893301 MODEL JAAIVD010000001;XM_032895129 XP_032751020 guanine nucleotide exchange factor for Rab-3A protein-coding 625946131 Katna1 katanin catalytic subunit A1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); intracellular protein localization (ortholog); microtubule bundle formation (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 229277604 229320214 - 22301074;30032202 116893039 MODEL JAAIVD010000001;XM_032895003 XP_032750894 katanin p60 ATPase-containing subunit A1 protein-coding 625946146 Igfn1 immunoglobulin like and fibronectin type III domain containing 1 INVOLVED IN myoblast differentiation (ortholog); myoblast fusion (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) 10 17784533 17807713 - 22301074 116911583 MODEL JAAIVD010000005;XM_032915563 XP_032771454 immunoglobulin-like and fibronectin type III domain-containing protein 1 protein-coding 625946164 Acat1 acetyl-CoA acetyltransferase 1 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); C-acetyltransferase activity (ortholog); cholesterol O-acyltransferase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); acetyl-CoA catabolic process (ortholog); adipose tissue development (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH arteriosclerosis (ortholog); beta-ketothiolase deficiency (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 47570092 47597932 - 30032202 116906725 MODEL JAAIVD010000027;XM_032909536 XP_032765427 acetyl-CoA acetyltransferase, mitochondrial protein-coding 625946180 Tradd TNFRSF1A associated via death domain ENCODES a protein that exhibits death domain binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ceramide signaling pathway; Toll-like receptor signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); Optic Nerve Injuries (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 17 24986301 24991886 - 22301074;30032202 116886047 MODEL JAAIVD010000011;XM_032887351 XP_032743242 tumor necrosis factor receptor type 1-associated DEATH domain protein protein-coding 625946189 Mrpl53 mitochondrial ribosomal protein L53 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 6 63114869 63116396 - 30032202 116903628 MODEL JAAIVD010000024;XM_032906288 XP_032762179 39S ribosomal protein L53, mitochondrial protein-coding 625946196 LOC116893963 ribosomal biogenesis factor 2 98028297 98028708 + 22301074;30032202 116893963 MODEL JAAIVD010000001;XM_032895680 XP_032751571 protein-coding 625946201 Sapcd1 suppressor APC domain containing 1 18 7625918 7627853 - 116887185 MODEL JAAIVD010000013;XM_032888740 XP_032744631 suppressor APC domain-containing protein 1 protein-coding 625946209 Ncmap non-compact myelin associated protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN peripheral nervous system myelin formation (ortholog); positive regulation of myelination (ortholog); FOUND IN paranode region of axon (ortholog); plasma membrane (ortholog); Schmidt-Lanterman incisure (ortholog) 1 22819466 22847762 + 30032202 116886700 MODEL JAAIVD010000025;XM_032888205 XP_032744096 noncompact myelin-associated protein protein-coding 625946218 LOC116899872 small nucleolar RNA SNORA17 4 42720665 42720790 - 116899872 MODEL JAAIVD010000003;XR_004387866 snorna 625946221 Nedd8 NEDD8 ubiquitin like modifier ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); intracellular protein localization (ortholog); protein neddylation (ortholog); PARTICIPATES IN neddylation pathway; p53 signaling pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); malignant astrocytoma (ortholog); Parkinson's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 12 69333015 69344880 + 30032202 116913117 MODEL JAAIVD010000007;XM_032917273 XP_032773164 protein-coding 625946229 LOC116890559 small nucleolar RNA SNORA17 1 103297008 103297117 - 116890559 MODEL JAAIVD010000025 pseudo 625946230 LOC116891968 uncharacterized LOC116891968 2 126686593 126688183 - 116891968 MODEL JAAIVD010000001;XR_004386882 ncrna 625946234 LOC116906392 small nucleolar RNA SNORD113/SNORD114 family 7 127185359 127185429 + 116906392 MODEL JAAIVD010000026;XR_004388661 snorna 625946237 Trnai-gau transfer RNA isoleucine (anticodon GAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889671 MODEL JAAIVD010000045 trna 625946238 Cndp2 carnosine dipeptidase 2 ENCODES a protein that exhibits dipeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); steatotic liver disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 15 47684254 47701339 + 22301074;30032202 116884621 MODEL JAAIVD010000010;XM_032885762 XP_032741653 cytosolic non-specific dipeptidase protein-coding 625946254 Cwc15 CWC15 spliceosome associated protein homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 8 10280886 10291492 + 30032202 116907291 MODEL JAAIVD010000027;XM_032910240;XM_032910241 XP_032766131;XP_032766132 spliceosome-associated protein CWC15 homolog protein-coding 625946267 LOC116891756 60S ribosomal protein L15-like 1 55395614 55396261 + 116891756 MODEL JAAIVD010000025 pseudo 625946268 LOC116906097 aldose reductase-related protein 2-like 7 73342609 73344866 - 116906097 MODEL JAAIVD010000026 pseudo 625946269 LOC116894299 RNA-binding protein 4B-like 2 139073832 139074248 - 116894299 MODEL JAAIVD010000001 pseudo 625946270 Thbd thrombomodulin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of blood coagulation (ortholog); response to cAMP (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 5 127969137 127972809 - 22301074 116902073 MODEL JAAIVD010000023;XM_032904363 XP_032760254 protein-coding 625946275 LOC116905910 eukaryotic translation initiation factor 2D-like 7 78529759 78531396 + 116905910 MODEL JAAIVD010000026 pseudo 625946276 Vps37a VPS37A subunit of ESCRT-I INVOLVED IN ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 53 (ortholog); transverse myelitis (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); ESCRT I complex (ortholog) 13 46927380 46959251 - 30032202 116914381 MODEL JAAIVD010000008;XM_032918586;XM_032918587;XM_032918588 XP_032774477;XP_032774478;XP_032774479 vacuolar protein sorting-associated protein 37A protein-coding 625946296 LOC116889037 adenine DNA glycosylase-like X 19861823 19863012 + 116889037 MODEL JAAIVD010000014 pseudo 625946297 LOC116893095 serine/arginine-rich splicing factor 3-like 2 61277661 61283784 + 116893095 MODEL JAAIVD010000001 pseudo 625946298 LOC116909540 olfactory receptor 10-like 9 31980544 31981511 + 22301074 116909540 MODEL JAAIVD010000002;XM_032913156 XP_032769047 protein-coding 625946302 Gp2 glycoprotein 2 ENCODES a protein that exhibits antigen binding (ortholog); INVOLVED IN antigen transcytosis by M cells in mucosal-associated lymphoid tissue (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Body Weight (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) 2 82206866 82221137 + 30032202 116893926 MODEL JAAIVD010000001;XM_032895647 XP_032751538 pancreatic secretory granule membrane major glycoprotein GP2 protein-coding 625946316 Slc4a1ap solute carrier family 4 member 1 adaptor protein FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 7 22615423 22642307 - 22301074;30032202 116905966 MODEL JAAIVD010000026;XM_032908971 XP_032764862 kanadaptin protein-coding 625946334 LOC116889958 olfactory receptor 6C6-like 1 161882351 161883334 - 22301074;30032202 116889958 MODEL JAAIVD010000025;XM_032890760 XP_032746651 protein-coding 625946338 Cmss1 cms1 ribosomal small subunit homolog 4 41403301 41429529 - 30032202 116898911 MODEL JAAIVD010000003;XM_032900318;XM_032900319 XP_032756209;XP_032756210 protein CMSS1 protein-coding 625946356 Il31 interleukin 31 ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); oncostatin-M receptor binding (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog) 16 30366143 30368569 + 30032202 116885286 MODEL JAAIVD010000004;XM_032886533 XP_032742424 interleukin-31 protein-coding 625946362 LOC116906817 olfactory receptor 1082-like 1 156890165 156891096 - 116906817 MODEL JAAIVD010000025 pseudo 625946363 Mark1 microtubule affinity regulating kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); establishment of mitochondrion localization (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); dendrite (ortholog) 10 63070581 63176519 - 22301074;30032202 116911710 MODEL JAAIVD010000005;XM_032915679;XM_032915680;XM_032915681 XP_032771570;XP_032771571;XP_032771572 serine/threonine-protein kinase MARK1 protein-coding 625946392 LOC116900583 olfactory receptor 4F6-like 5 90491005 90491940 + 22301074 116900583 MODEL JAAIVD010000023;XM_032902305 XP_032758196 protein-coding 625946395 LOC116906126 dehydrogenase/reductase SDR family member 7-like 7 86667481 86678112 - 116906126 MODEL JAAIVD010000026;XM_032909122 XP_032765013 protein-coding 625946403 Cacna1g calcium voltage-gated channel subunit alpha1 G ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); scaffold protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN action potential (ortholog); artery smooth muscle contraction (ortholog); calcium ion import (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH brain disease (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia type 42 (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 51067213 51135153 + 22301074;30032202 116909626 MODEL JAAIVD010000002;XM_032913254;XM_032913255;XM_032913256;XM_032913257;XM_032913258;XM_032913260;XM_032913261;XM_032913262;XM_032913263;XM_032913264;XM_032913265;XM_032913266;XM_032913267 XP_032769145;XP_032769146;XP_032769147;XP_032769148;XP_032769149;XP_032769151;XP_032769152;XP_032769153;XP_032769154;XP_032769155;XP_032769156;XP_032769157;XP_032769158 voltage-dependent T-type calcium channel subunit alpha-1G protein-coding 625946462 LOC116894164 olfactory receptor 2D3-like 2 105060408 105061340 - 22301074 116894164 MODEL JAAIVD010000001;XM_032895881 XP_032751772 protein-coding 625946465 LOC116901351 phosducin-like protein 5 15114324 15123707 - 22301074 116901351 MODEL JAAIVD010000023;XM_032903198 XP_032759089 protein-coding 625946473 Tmem130 transmembrane protein 130 FOUND IN Golgi apparatus (ortholog) 16 8429959 8452574 + 116885459 MODEL JAAIVD010000004;XM_032886741 XP_032742632 protein-coding 625946485 Gldc glycine decarboxylase ENCODES a protein that exhibits enzyme binding (ortholog); glycine binding (ortholog); glycine dehydrogenase (decarboxylating) activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glycine catabolic process (ortholog); glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH COVID-19 (ortholog); Developmental Disabilities (ortholog); generalized epilepsy (ortholog); FOUND IN glycine cleavage complex (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 30205049 30284540 - 22301074;30032202 116891082 MODEL JAAIVD010000001;XM_032891796 XP_032747687 glycine dehydrogenase (decarboxylating), mitochondrial protein-coding 625946514 LOC116886592 activated RNA polymerase II transcriptional coactivator p15-like 17 5551668 5552090 - 22301074;30032202 116886592 MODEL JAAIVD010000011;XM_032888115 XP_032744006 protein-coding 625946518 Spmip8 sperm microtubule inner protein 8 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 17 2173736 2182620 + 116886116 MODEL JAAIVD010000011;XM_032887454 XP_032743345 Tepp testis, prostate and placenta expressed;testis, prostate and placenta-expressed protein protein-coding 625946530 Sema4c semaphorin 4C INVOLVED IN cell migration in hindbrain (ortholog); cerebellum development (ortholog); muscle cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density membrane (ortholog) 4 112772043 112781971 - 30032202 116899294 MODEL JAAIVD010000003;XM_032900938;XM_032900939;XM_032900940;XM_032900941 XP_032756829;XP_032756830;XP_032756831;XP_032756832 semaphorin-4C protein-coding 625946557 LOC116889223 huntingtin-interacting protein M X 11414527 11415778 - 22301074 116889223 MODEL JAAIVD010000014;XM_032890376 XP_032746267 protein-coding 625946562 LOC116897445 U6 spliceosomal RNA 3 177124081 177124187 - 116897445 MODEL JAAIVD010000012;XR_004387480 snrna 625946565 Ppib peptidylprolyl isomerase B ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); RNA polymerase binding (ortholog); INVOLVED IN bone development (ortholog); host-mediated activation of viral genome replication (ortholog); host-mediated activation of viral process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); nucleoplasm (ortholog) 8 60396645 60402930 + 22301074;30032202 116906930 MODEL JAAIVD010000027;XM_032909855 XP_032765746 peptidyl-prolyl cis-trans isomerase B protein-coding 625946574 LOC116884979 protein S100-A6-like 15 25334571 25334839 + 116884979 MODEL JAAIVD010000010 pseudo 625946575 Nedd1 NEDD1 gamma-tubulin ring complex targeting factor FOUND IN apical part of cell (ortholog); centriole (ortholog); centrosome (ortholog) 1 171782470 171823298 - 30032202 116908164 MODEL JAAIVD010000025;XM_032911464 XP_032767355 protein NEDD1 protein-coding 625946594 LOC116888284 glyceraldehyde-3-phosphate dehydrogenase-like 1 229180274 229181128 - 116888284 MODEL JAAIVD010000025 pseudo 625946595 Htr6 5-hydroxytryptamine receptor 6 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); cerebral cortex cell migration (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Alzheimer's disease (ortholog); amphetamine abuse (ortholog); Memory Disorders (ortholog); FOUND IN cilium (ortholog); dendrite (ortholog); plasma membrane (ortholog) 1 19126213 19142372 + 22301074;30032202 116893774 MODEL JAAIVD010000025;XM_032895477 XP_032751368 protein-coding 625946602 Ankub1 ankyrin repeat and ubiquitin domain containing 1 3 96247712 96284294 - 22301074 116896845 MODEL JAAIVD010000012;XM_032898350;XM_032898351 XP_032754241;XP_032754242 protein ANKUB1 protein-coding 625946615 Commd2 COMM domain containing 2 3 96237283 96241570 - 116896846 MODEL JAAIVD010000012;XM_032898352 XP_032754243 COMM domain-containing protein 2 protein-coding 625946624 LOC116900390 olfactory receptor 5W2-like 5 69753302 69754240 - 22301074;30032202 116900390 MODEL JAAIVD010000023;XM_032902136 XP_032758027 protein-coding 625946628 LOC116904477 ran-specific GTPase-activating protein-like 6 139765234 139771851 + 116904477 MODEL JAAIVD010000024 pseudo 625946629 LOC116906517 U4 spliceosomal RNA 7 10907817 10908031 + 116906517 MODEL JAAIVD010000026 pseudo 625946630 LOC116914158 small nucleolar RNA SNORA84 12 72065204 72065336 - 116914158 MODEL JAAIVD010000007;XR_004389708 snorna 625946633 Klk4 kallikrein related peptidase 4 INVOLVED IN amelogenesis (ortholog); extracellular matrix disassembly (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 2A1 (ortholog); breast cancer (ortholog) 2 155497337 155501627 - 22301074;30032202 116892222 MODEL JAAIVD010000001;XM_032893787 XP_032749678 kallikrein-4 protein-coding 625946641 LOC116895840 60S ribosomal protein L19-like 3 81971496 81972012 - 116895840 MODEL JAAIVD010000012 pseudo 625946642 LOC116906389 small nucleolar RNA SNORD113/SNORD114 family 7 127265642 127265716 + 116906389 MODEL JAAIVD010000026;XR_004388659 snorna 625946645 LOC116906470 small nucleolar RNA SNORA17 7 50186511 50186602 + 116906470 MODEL JAAIVD010000026 pseudo 625946646 LOC116887992 cactin-like X 73038778 73079648 + 116887992 MODEL JAAIVD010000014 pseudo 625946647 LOC116885381 intraflagellar transport protein 20 homolog 16 6002456 6002941 - 30032202 116885381 MODEL JAAIVD010000004;XM_032886657 XP_032742548 protein-coding 625946652 Setd4 SET domain containing 4 ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 4 51015287 51033311 + 22301074;30032202 116898975 MODEL JAAIVD010000003;XM_032900400 XP_032756291 SET domain-containing protein 4 protein-coding 625946666 LOC116887951 60S ribosomal protein L24-like X 63703538 63704176 + 30032202 116887951 MODEL JAAIVD010000014;XM_032889402 XP_032745293 protein-coding 625946670 LOC116906340 U6 spliceosomal RNA 7 7834961 7835067 - 116906340 MODEL JAAIVD010000026;XR_004388621 snrna 625946673 Fuca2 alpha-L-fucosidase 2 ENCODES a protein that exhibits alpha-L-fucosidase activity (ortholog); INVOLVED IN fucose metabolic process (ortholog); glycoside catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); High Myopia (ortholog); FOUND IN extracellular space (ortholog) 2 223684984 223699432 - 22301074;30032202 116893009 MODEL JAAIVD010000001;XM_032894971 XP_032750862 plasma alpha-L-fucosidase protein-coding 625946684 LOC116893957 60S ribosomal protein L27-like 2 97128210 97128602 - 22301074;30032202 116893957 MODEL JAAIVD010000001;XM_032895675 XP_032751566 protein-coding 625946689 Pcdh18 protocadherin 18 INVOLVED IN brain development (ortholog) 3 104581286 104595243 + 22301074 116896896 MODEL JAAIVD010000012;XM_032898443 XP_032754334 protocadherin-18 protein-coding 625946697 Npy neuropeptide Y ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide Y receptor binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); central nervous system neuron development (ortholog); PARTICIPATES IN neuropeptide Y metabolic pathway; ASSOCIATED WITH absence epilepsy (ortholog); AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); GABA-ergic synapse (ortholog) 6 91247542 91254873 - 22301074;30032202 116903830 MODEL JAAIVD010000024;XM_032906542 XP_032762433 pro-neuropeptide Y protein-coding 625946705 Pigy phosphatidylinositol glycan anchor biosynthesis class Y ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 6 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog); plasma membrane (ortholog) 8 18406721 18408988 + 116907487 MODEL JAAIVD010000027;XM_032910478 XP_032766369 phosphatidylinositol N-acetylglucosaminyltransferase subunit Y protein-coding 625946711 LOC116907123 GTP-binding nuclear protein Ran 8 90365690 90366738 - 22301074;30032202 116907123 MODEL JAAIVD010000027;XM_032910096 XP_032765987 protein-coding 625946716 LOC116894120 olfactory receptor 52N1 2 103779797 103780762 - 22301074 116894120 MODEL JAAIVD010000001;XM_032895838 XP_032751729 protein-coding 625946719 LOC116907164 short transmembrane mitochondrial protein 1-like 8 98382623 98383387 - 116907164 MODEL JAAIVD010000027 pseudo 625946720 LOC116895067 small nucleolar RNA SNORA17 2 59904141 59904251 + 116895067 MODEL JAAIVD010000001 pseudo 625946721 LOC116890322 U6 spliceosomal RNA 1 154966467 154966573 - 116890322 MODEL JAAIVD010000025;XR_004386545 snrna 625946724 Nphp1 nephrocystin 1 INVOLVED IN cell projection organization (ortholog); intracellular protein localization (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); CAKUT (ortholog); FOUND IN cell-cell junction (ortholog); ciliary base (ortholog); ciliary transition zone (ortholog) 5 106520591 106576389 - 22301074;30032202 116901941 MODEL JAAIVD010000023;XM_032904172;XM_032904173;XM_032904174;XM_032904175 XP_032760063;XP_032760064;XP_032760065;XP_032760066 nephrocystin-1 protein-coding 625946755 LOC116887864 melanoma-associated antigen B4-like X 45189713 45190711 - 30032202 116887864 MODEL JAAIVD010000014;XM_032889360 XP_032745251 protein-coding 625946758 LOC116904637 glyceraldehyde-3-phosphate dehydrogenase-like 6 33944220 33944973 - 116904637 MODEL JAAIVD010000024 pseudo 625946759 Hspa6 heat shock protein family A (Hsp70) member 6 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); cellular response to heat (ortholog); protein refolding (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN centriole (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 10 50218027 50219991 - 22301074;30032202 116910907 MODEL JAAIVD010000005;XM_032914669 XP_032770560 heat shock 70 kDa protein 6 protein-coding 625946763 LOC116911822 small nucleolar RNA SNORA17 10 15966014 15966145 - 116911822 MODEL JAAIVD010000005;XR_004389359 snorna 625946766 LOC116890084 40S ribosomal protein S16-like 1 226393565 226394043 - 116890084 MODEL JAAIVD010000025 pseudo 625946767 LOC116910953 contactin-associated protein like 5-4-like 10 81394641 81517163 - 116910953 MODEL JAAIVD010000005;XM_032914685 XP_032770576 protein-coding 625946775 Ranbp3 RAN binding protein 3 ENCODES a protein that exhibits R-SMAD binding (ortholog); small GTPase binding (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 88048590 88086510 + 30032202 116899192 MODEL JAAIVD010000003;XM_032900770;XM_032900771;XM_032900772;XM_032900773;XM_032900775;XM_032900776 XP_032756661;XP_032756662;XP_032756663;XP_032756664;XP_032756666;XP_032756667 ran-binding protein 3 protein-coding 625946808 Sec23b SEC23 homolog B, COPII component ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type II (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); endomembrane system (ortholog); endoplasmic reticulum (ortholog) 5 124201399 124239457 + 22301074;30032202 116902049 MODEL JAAIVD010000023;XM_032904335 XP_032760226 SEC23 homolog B, COPII coat complex component;protein transport protein Sec23B protein-coding 625946833 LOC116894975 small nucleolar RNA SNORA20 2 191650368 191650497 + 116894975 MODEL JAAIVD010000001;XR_004387166 snorna 625946836 LOC116903296 vomeronasal type-2 receptor 26-like 6 23899540 23938481 - 22301074;30032202 116903296 MODEL JAAIVD010000024;XM_032905720 XP_032761611 protein-coding 625946844 LOC116886760 5S ribosomal RNA 17 43134846 43134965 - 116886760 MODEL JAAIVD010000011;XR_004386161 rrna 625946847 LOC116890180 mucin-like protein 2 1 259397531 259401095 + 116890180 MODEL JAAIVD010000025;XM_032890915 XP_032746806 protein-coding 625946855 Blvrb biliverdin reductase B ENCODES a protein that exhibits biliverdin reductase [NAD(P)H] activity (ortholog); peptidyl-cysteine S-nitrosylase activity (ortholog); riboflavin reductase (NADPH) activity (ortholog); INVOLVED IN heme catabolic process (ortholog); insulin receptor signaling pathway (ortholog); megakaryocyte differentiation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); esophagus squamous cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 168478587 168496334 - 116892430 MODEL JAAIVD010000001;XM_032894115 XP_032750006 flavin reductase (NADPH) protein-coding 625946864 LOC116903930 uncharacterized protein C8orf34 homolog 1 146078704 146189051 + 116903930 MODEL JAAIVD010000025;XM_032906705 XP_032762596 protein-coding 625946871 LOC116904752 small nucleolar RNA SNORA17 6 42652733 42652864 - 116904752 MODEL JAAIVD010000024;XR_004388431 snorna 625946874 LOC116894013 hemoglobin subunit epsilon-like 2 101796875 101798260 + 116894013 MODEL JAAIVD010000001 pseudo 625946875 LOC116892990 zinc finger protein 501-like 1 13371023 13381576 - 116892990 MODEL JAAIVD010000025 pseudo 625946876 LOC116883400 uncharacterized LOC116883400 14 9798040 9805546 - 116883400 MODEL JAAIVD010000009;XR_004385758 ncrna 625946880 Mapk14 mitogen-activated protein kinase 14 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); bone development (ortholog); cartilage condensation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 18 5112956 5172783 - 22301074;30032202 116887535 MODEL JAAIVD010000013;XM_032889165;XM_032889166;XM_032889167 XP_032745056;XP_032745057;XP_032745058 protein-coding 625946904 Fcgr2a Fc fragment of IgG receptor IIa ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); INVOLVED IN nerve development (ortholog); regulation of antibody-dependent cellular cytotoxicity (ortholog); regulation of Fc receptor mediated stimulatory signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Anaphylaxis (ortholog); arthus reaction (ortholog); FOUND IN cell surface (ortholog) 10 50227521 50236874 - 30032202 116911256 MODEL JAAIVD010000005;XM_032915157 XP_032771048 low affinity immunoglobulin gamma Fc region receptor II-a protein-coding 625946913 LOC116888112 torsin-1A-interacting protein 2-like X 100943103 100944558 + 116888112 MODEL JAAIVD010000014 pseudo 625946914 Tmem233 transmembrane protein 233 FOUND IN plasma membrane (ortholog) 16 37747585 37808328 + 22301074;30032202 116885270 MODEL JAAIVD010000004;XM_032886504 XP_032742395 protein-coding 625946919 LOC116904753 U1 spliceosomal RNA 6 137183695 137183825 - 116904753 MODEL JAAIVD010000024 pseudo 625946920 Pmfbp1 polyamine modulated factor 1 binding protein 1 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); oligospermia (ortholog); spermatogenic failure 31 (ortholog); FOUND IN cytoplasm (ortholog); sperm flagellum (ortholog); sperm head (ortholog) 17 29213448 29263257 + 30032202 116886282 MODEL JAAIVD010000011;XM_032887708;XM_032887709 XP_032743599;XP_032743600 polyamine-modulated factor 1-binding protein 1 protein-coding 625946947 Safb2 scaffold attachment factor B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of androgen receptor signaling pathway (ortholog); Sertoli cell differentiation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 4 87929995 87960120 - 22301074;30032202 116899183 MODEL JAAIVD010000003;XM_032900757;XM_032900758;XM_032900759;XM_032900760;XM_032900761;XM_032900763;XM_032900764;XR_004387693;XR_004387694 XP_032756648;XP_032756649;XP_032756650;XP_032756651;XP_032756652;XP_032756654;XP_032756655 protein-coding 625946998 LOC116888438 cilia- and flagella-associated protein 47-like X 37538932 37544910 - 116888438 MODEL JAAIVD010000014;XM_032889712 XP_032745603 protein-coding 625947005 LOC116908729 hepatitis A virus cellular receptor 1 homolog 9 29203540 29217977 + 30032202 116908729 MODEL JAAIVD010000002;XM_032912072 XP_032767963 protein-coding 625947014 Sh3bp4 SH3 domain binding protein 4 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN amino acid import (ortholog); cellular response to amino acid stimulus (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 4 161091879 161171481 + 22301074;30032202 116899626 MODEL JAAIVD010000003;XM_032901590 XP_032757481 SH3 domain-binding protein 4 protein-coding 625947024 LOC116896251 zinc finger protein 728-like 3 28376530 28393500 + 30032202 116896251 MODEL JAAIVD010000012;XM_032897322 XP_032753213 protein-coding 625947033 LOC116891296 acylcarnitine hydrolase-like 2 54876066 54882998 - 30032202 116891296 MODEL JAAIVD010000001;XM_032892206 XP_032748097 protein-coding 625947049 Mtx3 metaxin 3 FOUND IN mitochondrion (ortholog) 3 203444554 203452952 - 22301074;30032202 116897296 MODEL JAAIVD010000012;XM_032899031;XM_032899032;XR_004387410 XP_032754922;XP_032754923 metaxin-3 protein-coding 625947067 Det1 DET1 partner of COP1 E3 ubiquitin ligase ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); protein-containing complex assembly (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 2 121402932 121418711 + 30032202 116891954 MODEL JAAIVD010000001;XM_032893395;XM_032893396 XP_032749286;XP_032749287 DET1 homolog protein-coding 625947082 LOC116915185 small nucleolar RNA SNORA70 13 20500322 20500455 - 116915185 MODEL JAAIVD010000008;XR_004389844 snorna 625947085 LOC116886364 pterin-4-alpha-carbinolamine dehydratase 2 17 14166451 14166933 - 22301074;30032202 116886364 MODEL JAAIVD010000011;XM_032887824 XP_032743715 protein-coding 625947089 Sptbn2 spectrin beta, non-erythrocytic 2 ENCODES a protein that exhibits structural constituent of postsynapse (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to ethanol (ortholog); cerebellar Purkinje cell layer morphogenesis (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); endosome (ortholog) 2 2910417 2944270 - 22301074;30032202 116890760 MODEL JAAIVD010000001;XM_032891221 XP_032747112 spectrin beta chain, non-erythrocytic 2 protein-coding 625947129 LOC116909432 olfactory receptor 1361-like 9 38720393 38721337 + 22301074;30032202 116909432 MODEL JAAIVD010000002;XM_032913007 XP_032768898 protein-coding 625947132 Tssk6 testis specific serine kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); FOUND IN axonemal microtubule doublet inner sheath (ortholog); sperm flagellum (ortholog) 13 12169493 12173527 + 22301074;30032202 116914540 MODEL JAAIVD010000008;XM_032918871 XP_032774762 testis-specific serine/threonine-protein kinase 6 protein-coding 625947138 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92642690 92642761 + 116904829 MODEL JAAIVD010000024 trna 625947139 LOC116895079 small nucleolar RNA SNORD88 2 155283787 155283876 - 116895079 MODEL JAAIVD010000001;XR_004387248 snorna 625947142 LOC116904258 gamma-glutamylaminecyclotransferase-like 6 33178467 33179086 + 116904258 MODEL JAAIVD010000024 pseudo 625947143 LOC116894761 gastrula zinc finger protein XlCGF17.1-like 2 186007832 186009507 + 30032202 116894761 MODEL JAAIVD010000001;XM_032896425 XP_032752316 protein-coding 625947147 LOC116913785 olfactory receptor 4K2-like 12 72986129 72992966 + 22301074 116913785 MODEL JAAIVD010000007;XM_032918090;XM_032918091 XP_032773981;XP_032773982 protein-coding 625947154 LOC116902964 glucosamine 6-phosphate N-acetyltransferase-like 6 125751110 125751662 + 116902964 MODEL JAAIVD010000024 pseudo 625947155 LOC116900214 uncharacterized LOC116900214 5 53085571 53104228 - 116900214 MODEL JAAIVD010000023;XR_004387926 ncrna 625947160 LOC116907170 olfactory receptor 7G2-like 8 15904136 15905083 - 22301074;30032202 116907170 MODEL JAAIVD010000027;XM_032910125 XP_032766016 protein-coding 625947163 LOC116884460 uncharacterized LOC116884460 15 78917289 78918397 - 22301074 116884460 MODEL JAAIVD010000010;XM_032885560 XP_032741451 uncharacterized protein LOC116884460 protein-coding 625947168 Nfasc neurofascin ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); protein domain specific binding (ortholog); INVOLVED IN axon guidance (ortholog); clustering of voltage-gated sodium channels (ortholog); myelination (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Central and Peripheral Motor Dysfunction (ortholog); neuromuscular disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); dendrite (ortholog) 10 3104894 3283731 + 30032202 116911368 MODEL JAAIVD010000005;XM_032915297;XM_032915298 XP_032771188;XP_032771189 protein-coding 625947206 Wdr82 WD repeat domain 82 ENCODES a protein that exhibits chromatin binding (ortholog); lncRNA binding (ortholog); INVOLVED IN gene expression (ortholog); lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); histone methyltransferase complex (ortholog) 8 97479457 97499576 + 22301074;30032202 116907459 MODEL JAAIVD010000027;XM_032910445 XP_032766336 WD repeat-containing protein 82 protein-coding 625947219 LOC116903027 uncharacterized LOC116903027 6 85902381 85912718 + 116903027 MODEL JAAIVD010000024;XR_004388247 ncrna 625947224 Mpp7 MAGUK p55 scaffold protein 7 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); positive regulation of protein-containing complex assembly (ortholog); protein localization to adherens junction (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 14 28543545 28632450 + 22301074;30032202 116883982 MODEL JAAIVD010000009;XM_032885218 XP_032741109 MAGUK p55 subfamily member 7;membrane palmitoylated protein 7 protein-coding 625947242 Hcrtr1 hypocretin receptor 1 ENCODES a protein that exhibits orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); withdrawal disorder (ortholog); FOUND IN plasma membrane (ortholog) 1 28009678 28018667 + 22301074;30032202 116886897 MODEL JAAIVD010000025;XM_032888362 XP_032744253 orexin receptor type 1 protein-coding 625947255 LOC116902616 small nucleolar RNA SNORA40 5 25129471 25129595 + 116902616 MODEL JAAIVD010000023;XR_004388195 snorna 625947258 Larp4b La ribonucleoprotein 4B ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN positive regulation of 3'-UTR-mediated mRNA stabilization (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); nucleolus (ortholog) 14 22986259 23064823 - 30032202 116883865 MODEL JAAIVD010000009;XM_032885131 XP_032741022 la-related protein 4B protein-coding 625947280 LOC116897263 uncharacterized LOC116897263 3 199095654 199098182 - 116897263 MODEL JAAIVD010000012;XR_004387408 ncrna 625947285 Sbspon somatomedin B and thrombospondin type 1 domain containing ASSOCIATED WITH Hepatomegaly (ortholog) 1 150248376 150277339 - 116904048 MODEL JAAIVD010000025;XM_032906910 XP_032762801 somatomedin-B and thrombospondin type-1 domain-containing protein protein-coding 625947294 Trim46 tripartite motif containing 46 INVOLVED IN anterograde synaptic vesicle transport (ortholog); axonogenesis (ortholog); microtubule bundle formation (ortholog); FOUND IN axon initial segment (ortholog); main axon (ortholog); proximal neuron projection (ortholog) 3 64430807 64442767 + 22301074 116896657 MODEL JAAIVD010000012;XM_032897993 XP_032753884 tripartite motif-containing protein 46 protein-coding 625947308 Gemin6 gem nuclear organelle associated protein 6 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) 7 12841999 12846510 - 30032202 116905855 MODEL JAAIVD010000026;XM_032908832;XM_032908833 XP_032764723;XP_032764724 gem-associated protein 6 protein-coding 625947318 LOC116915171 U6 spliceosomal RNA 13 35290471 35290577 - 116915171 MODEL JAAIVD010000008;XR_004389832 snrna 625947321 Mtss1 MTSS I-BAR domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); actin monomer binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); non-Hodgkin lymphoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) 1 233467346 233606645 - 22301074;30032202 116911913 MODEL JAAIVD010000025;XM_032915810;XM_032915814;XM_032915823;XM_032915830;XM_032915837;XM_032915846;XM_032915856;XM_032915863;XM_032915873 XP_032771701;XP_032771705;XP_032771714;XP_032771721;XP_032771728;XP_032771737;XP_032771747;XP_032771754;XP_032771764 protein MTSS 1 protein-coding 625947360 Smim27 small integral membrane protein 27 1 117932988 117933651 - 116902689 MODEL JAAIVD010000025;XM_032905046 XP_032760937 protein-coding 625947366 LOC116908486 uncharacterized LOC116908486 9 58077165 58092971 + 116908486 MODEL JAAIVD010000002;XR_004388986;XR_004388987 ncrna 625947373 Chfr checkpoint with forkhead and ring finger domains ENCODES a protein that exhibits nucleotide binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN meiotic spindle checkpoint signaling (ortholog); mitotic cell cycle (ortholog); mitotic G2/M transition checkpoint (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Endometrial Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 16 44184968 44217144 - 22301074;30032202 116885588 MODEL JAAIVD010000004;XM_032886889;XM_032886890;XM_032886891 XP_032742780;XP_032742781;XP_032742782 E3 ubiquitin-protein ligase CHFR protein-coding 625947398 Adam30 ADAM metallopeptidase domain 30 FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) 3 59153770 59155950 - 22301074;30032202 116895392 MODEL JAAIVD010000012;XM_032896682 XP_032752573 disintegrin and metalloproteinase domain-containing protein 30 protein-coding 625947401 Cpne7 copine 7 INVOLVED IN cellular response to calcium ion (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 17 42737498 42754100 + 30032202 116886377 MODEL JAAIVD010000011;XM_032887844 XP_032743735 copine-7 protein-coding 625947420 Grm1 glutamate metabotropic receptor 1 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); glutamate receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to electrical stimulus (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive spinocerebellar ataxia 13 (ortholog); Bone Tissue Neoplasms (ortholog); FOUND IN axon (ortholog); dendriole (ortholog); dendrite (ortholog) 2 226130164 226499428 + 30032202 116893022 MODEL JAAIVD010000001;XM_032894982;XM_032894983 XP_032750873;XP_032750874 metabotropic glutamate receptor 1 protein-coding 625947436 Nckap1 NCK associated protein 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN apical protein localization (ortholog); basal protein localization (ortholog); cell migration involved in gastrulation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN filamentous actin (ortholog); glutamatergic synapse (ortholog); lamellipodium (ortholog) 5 57681260 57758159 - 30032202 116901567 MODEL JAAIVD010000023;XM_032903563;XM_032903564 XP_032759454;XP_032759455 nck-associated protein 1 protein-coding 625947476 LOC116886933 mortality factor 4-like protein 2 1 217986797 217995091 - 116886933 MODEL JAAIVD010000025 pseudo 625947477 LOC116901108 protein CutA homolog 5 759489 779418 - 22301074;30032202 116901108 MODEL JAAIVD010000023;XM_032902673 XP_032758564 protein-coding 625947487 LOC116887994 pescadillo homolog X 73632479 73634216 - 116887994 MODEL JAAIVD010000014 pseudo 625947488 Hsd17b12 hydroxysteroid 17-beta dehydrogenase 12 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); fatty acid elongation, saturated fatty acid (ortholog); positive regulation of cell-substrate adhesion (ortholog); FOUND IN extracellular matrix (ortholog); fatty acid elongase complex (ortholog) 5 68190715 68314559 - 22301074;30032202 116901659 MODEL JAAIVD010000023;XM_032903770 XP_032759661 very-long-chain 3-oxoacyl-CoA reductase protein-coding 625947503 Fam171a2 family with sequence similarity 171 member A2 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 61732174 61742260 - 116909498 MODEL JAAIVD010000002;XM_032913102 XP_032768993 protein FAM171A2 protein-coding 625947515 LOC116899873 small nucleolar RNA SNORA17 4 61678061 61678188 - 116899873 MODEL JAAIVD010000003;XR_004387867 snorna 625947518 Vsig10l2 V-set and immunoglobulin domain containing 10 like 2 8 31049341 31058497 - 30032202 116906625 MODEL JAAIVD010000027;XM_032909385 XP_032765276 V-set and immunoglobulin domain-containing protein 10-like 2 protein-coding 625947532 Rlf RLF zinc finger ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN negative regulation of heterochromatin formation (ortholog); regulation of transcription by RNA polymerase II (ortholog) 1 35815641 35871825 + 30032202 116897198 MODEL JAAIVD010000025;XM_032898904 XP_032754795 zinc finger protein Rlf protein-coding 625947544 Mapda N6-Methyl-AMP deaminase INVOLVED IN response to alcohol (ortholog) 5 99285929 99303308 + 30032202 116901852 MODEL JAAIVD010000023;XM_032904043;XM_032904044;XM_032904045 XP_032759934;XP_032759935;XP_032759936 Adal adenosine deaminase like;adenosine deaminase-like protein protein-coding 625947565 Bace1 beta-secretase 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 8 40367908 40392304 + 22301074;30032202 116906705 MODEL JAAIVD010000027;XM_032909509 XP_032765400 protein-coding 625947578 Syk spleen associated tyrosine kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); interleukin-15 receptor binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); apoptotic signaling pathway (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN eicosanoid signaling pathway; FasL mediated signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); arthritis (ortholog); colitis (ortholog); FOUND IN B cell receptor complex (ortholog); cytoplasm (ortholog); early phagosome (ortholog) 14 70903375 70973626 + 22301074;30032202 116883680 MODEL JAAIVD010000009;XM_032884891 XP_032740782 tyrosine-protein kinase SYK protein-coding 625947596 Syngr1 synaptogyrin 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); modulation of chemical synaptic transmission (ortholog); protein targeting (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); prostate cancer (ortholog); schizophrenia (ortholog); FOUND IN Schaffer collateral - CA1 synapse (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 1 249874240 249881355 + 30032202 116890012 MODEL JAAIVD010000025;XM_032890798 XP_032746689 synaptogyrin-1 protein-coding 625947604 LOC116887164 olfactory receptor 10C1-like 18 10636290 10637261 + 22301074 116887164 MODEL JAAIVD010000013;XM_032888712;XM_032888713 XP_032744603;XP_032744604 protein-coding 625947611 LOC116893999 olfactory receptor 51I2 2 101598082 101599020 - 22301074 116893999 MODEL JAAIVD010000001;XM_032895714 XP_032751605 protein-coding 625947614 Airim AFG2 interacting ribosome maturation factor INVOLVED IN ribosomal large subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 33359066 33365617 - 30032202 116896825 MODEL JAAIVD010000025;XM_032898306 XP_032754197 C1H1orf109 chromosome 1 C1orf109 homolog;uncharacterized protein C1orf109 homolog protein-coding 625947623 LOC116883435 enoyl-CoA delta isomerase 3, peroxisomal-like 14 53470656 53493009 - 116883435 MODEL JAAIVD010000009;XM_032884574 XP_032740465 protein-coding 625947636 Slc35e4 solute carrier family 35 member E4 11 72919294 72926062 - 30032202 116912069 MODEL JAAIVD010000006;XM_032915933 XP_032771824 protein-coding 625947642 C4H21orf140 chromosome 4 C21orf140 homolog 4 52300854 52303426 + 116897974 MODEL JAAIVD010000003;XM_032899377 XP_032755268 Fam243a family with sequence similarity 243 member A;protein FAM243A protein-coding 625947647 Psip1 PC4 and SRSF1 interacting protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); supercoiled DNA binding (ortholog); INVOLVED IN mRNA 5'-splice site recognition (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to heat (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nuclear periphery (ortholog) 1 70286741 70318598 + 30032202 116900592 MODEL JAAIVD010000025;XM_032902311;XM_032902317;XM_032902325;XM_032902331;XM_032902339 XP_032758202;XP_032758208;XP_032758216;XP_032758222;XP_032758230 PC4 and SFRS1 interacting protein 1;PC4 and SFRS1-interacting protein protein-coding 625947686 Capn11 calpain 11 FOUND IN acrosomal vesicle (ortholog) 4 84233435 84254251 + 22301074;30032202 116898049 MODEL JAAIVD010000003;XM_032899443 XP_032755334 calpain-11 protein-coding 625947712 Bud13 BUD13 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Achalasia-Progeroid Syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) 8 40795840 40811012 + 30032202 116906800 MODEL JAAIVD010000027;XM_032909672 XP_032765563 BUD13 homolog protein-coding 625947726 LOC116904736 small nucleolar RNA SNORA17 6 64275934 64276063 - 116904736 MODEL JAAIVD010000024;XR_004388425 snorna 625947729 Bcam basal cell adhesion molecule (Lutheran blood group) ENCODES a protein that exhibits laminin binding (ortholog); laminin receptor activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 2 170846265 170860586 + 30032202 116892519 MODEL JAAIVD010000001;XM_032894275 XP_032750166 basal cell adhesion molecule protein-coding 625947748 LOC116906100 peptidyl-prolyl cis-trans isomerase A-like 7 74095200 74137118 - 116906100 MODEL JAAIVD010000026 pseudo 625947749 Armc12 armadillo repeat containing 12 INVOLVED IN flagellated sperm motility (ortholog); positive regulation of cell growth (ortholog); sperm mitochondrial sheath assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); spermatogenic failure 90 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); nucleus (ortholog) 18 5320902 5331061 - 30032202 116887542 MODEL JAAIVD010000013;XM_032889172;XM_032889173 XP_032745063;XP_032745064 armadillo repeat-containing protein 12 protein-coding 625947763 Pik3r6 phosphoinositide-3-kinase regulatory subunit 6 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase regulator activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of MAP kinase activity (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin signaling pathway; FOUND IN membrane (ortholog); phosphatidylinositol 3-kinase complex, class IA (ortholog); phosphatidylinositol 3-kinase complex, class IB (ortholog) 9 48104295 48153393 + 22301074;30032202 116910174 MODEL JAAIVD010000002;XM_032914034 XP_032769925 phosphoinositide 3-kinase regulatory subunit 6 protein-coding 625947787 Itgb5 integrin subunit beta 5 ENCODES a protein that exhibits integrin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); thyroid gland disease (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); focal adhesion (ortholog) 4 18625201 18742296 + 30032202 116898797 MODEL JAAIVD010000003;XM_032900148 XP_032756039 integrin beta-5 protein-coding 625947806 Rps3a ribosomal protein S3A ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fibroblast proliferation (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 3 67417253 67421590 + 22301074;30032202 116896726 MODEL JAAIVD010000012;XM_032898149 XP_032754040 40S ribosomal protein S3a protein-coding 625947816 LOC116906323 U6 spliceosomal RNA 7 12965344 12965447 - 116906323 MODEL JAAIVD010000026;XR_004388610 snrna 625947819 LOC116908452 small nucleolar RNA SNORD14 8 35404648 35404733 + 116908452 MODEL JAAIVD010000027;XR_004388970 snorna 625947822 Msn moesin ENCODES a protein that exhibits actin binding (ortholog); cell adhesion molecule binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); gland morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) X 55067745 55092046 + 22301074;30032202 116888623 MODEL JAAIVD010000014;XM_032889921 XP_032745812 protein-coding 625947838 LOC116899894 U1 spliceosomal RNA 4 111092838 111092999 + 116899894 MODEL JAAIVD010000003;XR_004387872 snrna 625947841 LOC116895546 pre-mRNA-processing factor 19-like 3 121225038 121226356 + 116895546 MODEL JAAIVD010000012 pseudo 625947842 LOC116904746 small nucleolar RNA SNORA17 6 111820293 111820410 - 116904746 MODEL JAAIVD010000024 pseudo 625947843 Leprot leptin receptor overlapping transcript ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of growth hormone receptor signaling pathway (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog) 1 52897625 52909699 - 30032202 116899678 MODEL JAAIVD010000025;XM_032901699 XP_032757590 leptin receptor gene-related protein protein-coding 625947851 LOC116883849 40S ribosomal protein S24-like 14 31217994 31218385 + 116883849 MODEL JAAIVD010000009 pseudo 625947852 ATP8 ATP synthase F0 subunit 8 MT 7751 7954 + 7751803 A0A7L7S8S0;B7SE65 REVIEWED EU273707 ABX45237;YP_002791020 protein-coding 625947853 Smpd1 sphingomyelin phosphodiesterase 1 ENCODES a protein that exhibits acid sphingomyelin phosphodiesterase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to UV (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Gaucher's disease (ortholog); genetic disease (ortholog); FOUND IN endolysosome (ortholog); endosome (ortholog); extracellular space (ortholog) 2 104390759 104394682 + 22301074;30032202 116891819 MODEL JAAIVD010000001;XM_032893181 XP_032749072 sphingomyelin phosphodiesterase protein-coding 625947863 Mmp13 matrix metallopeptidase 13 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); collagen binding (ortholog); INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); anodontia (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog); intercellular canaliculus (ortholog) 8 3570990 3581262 + 22301074;30032202 116907194 MODEL JAAIVD010000027;XM_032910157 XP_032766048 collagenase 3 protein-coding 625947877 LOC116896069 26S proteasome regulatory subunit 10B-like 3 210200567 210201793 + 116896069 MODEL JAAIVD010000012 pseudo 625947878 LOC116910682 small nucleolar RNA SNORA42/SNORA80 family 9 34734352 34734487 - 116910682 MODEL JAAIVD010000002;XR_004389213 snorna 625947881 LOC116912536 secreted Ly-6/uPAR domain-containing protein 2 1 247485401 247489272 - 30032202 116912536 MODEL JAAIVD010000025;XM_032916641 XP_032772532 protein-coding 625947887 LOC116886141 uncharacterized LOC116886141 1 10008999 10012275 - 116886141 MODEL JAAIVD010000025;XR_004386091 ncrna 625947891 LOC116910257 olfactory receptor 1468-like 9 31650911 31651835 - 116910257 MODEL JAAIVD010000002 pseudo 625947892 Znf322 zinc finger protein 322 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of stem cell population maintenance (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 42351774 42367591 + 30032202 116883551 MODEL JAAIVD010000009;XM_032884722;XM_032884723;XM_032884725;XM_032884726;XM_032884727;XM_032884728;XM_032884729;XM_032884730;XM_032884731 XP_032740613;XP_032740614;XP_032740616;XP_032740617;XP_032740618;XP_032740619;XP_032740620;XP_032740621;XP_032740622 protein-coding 625947927 Ppp1r10 protein phosphatase 1 regulatory subunit 10 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); negative regulation of mitotic DNA damage checkpoint (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) 18 9126461 9141516 + 22301074 116887477 MODEL JAAIVD010000013;XM_032889093;XM_032889094 XP_032744984;XP_032744985 serine/threonine-protein phosphatase 1 regulatory subunit 10 protein-coding 625947956 LOC116900254 60S ribosomal protein L23a-like 1 110865123 110865634 - 116900254 MODEL JAAIVD010000025 pseudo 625947957 LOC116895089 U6atac minor spliceosomal RNA 2 11065367 11065485 - 116895089 MODEL JAAIVD010000001 pseudo 625947958 C1qtnf4 C1q and TNF related 4 INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); gene expression (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN extracellular space (ortholog) 5 65060756 65065476 + 22301074;30032202 116901601 MODEL JAAIVD010000023;XM_032903627 XP_032759518 complement C1q tumor necrosis factor-related protein 4 protein-coding 625947964 Rnd1 Rho family GTPase 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of cell adhesion (ortholog); neuron remodeling (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); plasma membrane (ortholog) 1 271495776 271502183 - 22301074;30032202 116884782 MODEL JAAIVD010000025;XM_032886018 XP_032741909 rho-related GTP-binding protein Rho6 protein-coding 625947973 Slc25a31 solute carrier family 25 member 31 INVOLVED IN male meiosis I (ortholog); regulation of mitochondrial membrane permeability (ortholog); spermatogenesis (ortholog); FOUND IN membrane (ortholog); mitochondrial permeability transition pore complex (ortholog); mitochondrion (ortholog) 3 113114885 113130509 - 22301074;30032202 116896909 MODEL JAAIVD010000012;XM_032898469 XP_032754360 ADP/ATP translocase 4 protein-coding 625947983 Ldaf1 lipid droplet assembly factor 1 INVOLVED IN lipid droplet formation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 81564881 81649743 - 116891589 MODEL JAAIVD010000001;XM_032892768;XM_032892769;XM_032892770;XM_032892771;XM_032892772 XP_032748659;XP_032748660;XP_032748661;XP_032748662;XP_032748663 Tmem159 promethin;transmembrane protein 159 protein-coding 625948002 LOC116911598 SRA stem-loop-interacting RNA-binding protein, mitochondrial-like 10 22374089 22374423 + 116911598 MODEL JAAIVD010000005 pseudo 625948003 Znhit2 zinc finger HIT-type containing 2 2 1628412 1629723 - 116890680 MODEL JAAIVD010000001;XM_032891087 XP_032746978 zinc finger HIT domain-containing protein 2 protein-coding 625948008 Slc6a17 solute carrier family 6 member 17 INVOLVED IN alanine transport (ortholog); brain development (ortholog); glycine transport (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 48 (ortholog); long QT syndrome (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 3 50740892 50788227 + 22301074;30032202 116896388 MODEL JAAIVD010000012;XM_032897514 XP_032753405 sodium-dependent neutral amino acid transporter SLC6A17 protein-coding 625948024 LOC116898068 adenylate kinase isoenzyme 1 4 88393873 88401753 + 22301074;30032202 116898068 MODEL JAAIVD010000003;XM_032899462 XP_032755353 adenylate kinase isoenzyme 1-like protein-coding 625948032 Tnxb tenascin XB ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-matrix adhesion (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); Cyanosis (ortholog); Dyspnea (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); extracellular space (ortholog) 18 7340100 7398384 + 22301074 116887591 MODEL JAAIVD010000013;XM_032889215 XP_032745106 tenascin-X protein-coding 625948076 LOC116900310 olfactory receptor 8H1-like 5 64107339 64108283 - 22301074;30032202 116900310 MODEL JAAIVD010000023;XM_032902066 XP_032757957 protein-coding 625948079 Cenpq centromere protein Q INVOLVED IN metaphase chromosome alignment (ortholog); positive regulation of protein localization to kinetochore (ortholog); FOUND IN actin cytoskeleton (ortholog); inner kinetochore (ortholog); nucleoplasm (ortholog) 4 94947257 94959135 + 116898086 MODEL JAAIVD010000003;XM_032899473 XP_032755364 protein-coding 625948090 Anks1a ankyrin repeat and sterile alpha motif domain containing 1A ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neuron remodeling (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); nucleoplasm (ortholog) 18 5801131 5949787 - 22301074;30032202 116886852 MODEL JAAIVD010000013;XM_032888303;XM_032888304;XM_032888306;XM_032888307 XP_032744194;XP_032744195;XP_032744197;XP_032744198 ankyrin repeat and SAM domain-containing protein 1A protein-coding 625948128 LOC116887390 olfactory receptor 1361-like 18 10433815 10434744 + 22301074;30032202 116887390 MODEL JAAIVD010000013;XM_032888984 XP_032744875 protein-coding 625948131 LOC116885905 mucin-3A-like 16 16772219 16775199 + 116885905 MODEL JAAIVD010000004;XM_032887221 XP_032743112 protein-coding 625948135 LOC116886662 60S ribosomal protein L10a-like 17 26948213 26948872 - 116886662 MODEL JAAIVD010000011 pseudo 625948136 Krabd3 KRAB domain containing 3 6 92554918 92576498 - 22301074 116903862 MODEL JAAIVD010000024;XM_032906607;XM_032906608;XM_032906609;XM_032906610;XM_032906611 XP_032762498;XP_032762499;XP_032762500;XP_032762501;XP_032762502 Krba1 KRAB-A domain containing 1;protein KRBA1 protein-coding 625948172 Echdc1 ethylmalonyl-CoA decarboxylase 1 ENCODES a protein that exhibits carboxy-lyase activity (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); melanoma (ortholog); short chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN cytosol (ortholog) 2 203433136 203465725 - 30032202 116892913 MODEL JAAIVD010000001;XM_032894836;XM_032894837 XP_032750727;XP_032750728 ethylmalonyl-CoA decarboxylase protein-coding 625948185 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889658 MODEL JAAIVD010000045 trna 625948186 Znf827 zinc finger protein 827 ENCODES a protein that exhibits NuRD complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); establishment of protein localization to telomere (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); ribonucleoprotein complex (ortholog) 17 20915204 21074807 - 30032202 116886573 MODEL JAAIVD010000011;XM_032888093 XP_032743984 protein-coding 625948202 LOC116906304 5S ribosomal RNA 7 54108018 54108136 - 116906304 MODEL JAAIVD010000026;XR_004388593 rrna 625948205 LOC116893678 olfactory receptor 5AN1-like 2 12342290 12343237 - 22301074;30032202 116893678 MODEL JAAIVD010000001;XM_032895395 XP_032751286 protein-coding 625948208 Tmem219 transmembrane protein 219 2 74997697 75010004 + 116891498 MODEL JAAIVD010000001;XM_032892609;XM_032892610;XM_032892611 XP_032748500;XP_032748501;XP_032748502 insulin-like growth factor-binding protein 3 receptor protein-coding 625948225 LOC116888540 ruvB-like 1 X 3290530 3292076 - 22301074;30032202 116888540 MODEL JAAIVD010000014;XM_032889845 XP_032745736 protein-coding 625948229 Aldh5a1 aldehyde dehydrogenase 5 family member A1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN central nervous system development (ortholog); gamma-aminobutyric acid catabolic process (ortholog); gamma-aminobutyric acid metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); dystonia (ortholog); FOUND IN mitochondrion (ortholog) 14 43961065 43985374 - 22301074;30032202 116915212 MODEL JAAIVD010000009;XM_032919587 XP_032775478 succinate-semialdehyde dehydrogenase, mitochondrial protein-coding 625948243 Spock3 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN negative regulation of endopeptidase activity (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 13 25657018 26040478 - 22301074 116914602 MODEL JAAIVD010000008;XM_032918962;XM_032918963;XM_032918964;XM_032918965 XP_032774853;XP_032774854;XP_032774855;XP_032774856 testican-3 protein-coding 625948268 LOC116894704 uncharacterized LOC116894704 2 224287792 224289472 + 116894704 MODEL JAAIVD010000001;XR_004387038 ncrna 625948272 Rfx7 regulatory factor X7 ENCODES a protein that exhibits RNA polymerase II core promoter sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 71 with behavioral abnormalities (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 8 66870517 66951089 + 30032202 116907695 MODEL JAAIVD010000027;XM_032910805;XM_032910806;XM_032910807;XM_032910808 XP_032766696;XP_032766697;XP_032766698;XP_032766699 DNA-binding protein RFX7 protein-coding 625948297 Mei4 meiotic double-stranded break formation protein 4 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); FOUND IN chromosome (ortholog); lateral element (ortholog) 8 76111971 76279811 + 22301074;30032202 116907047 MODEL JAAIVD010000027;XM_032910002 XP_032765893 meiosis-specific protein MEI4 protein-coding 625948306 LOC116893515 heterogeneous nuclear ribonucleoprotein A1-like 2 191289939 191292146 - 116893515 MODEL JAAIVD010000001 pseudo 625948307 Trdn triadin ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); endoplasmic reticulum membrane organization (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); catecholaminergic polymorphic ventricular tachycardia 5 (ortholog); FOUND IN calcium channel complex (ortholog); cytosol (ortholog); junctional membrane complex (ortholog) 2 207258965 207567902 + 22301074;30032202 116892933 MODEL JAAIVD010000001;XM_032894871 XP_032750762 protein-coding 625948331 LOC116911724 60S ribosomal protein L29-like 10 25487763 25488209 + 22301074;30032202 116911724 MODEL JAAIVD010000005;XM_032915697 XP_032771588 protein-coding 625948334 Clic3 chloride intracellular channel 3 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-disulfide reductase (glutathione) activity (ortholog); INVOLVED IN chloride transport (ortholog); positive regulation of sprouting angiogenesis (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nuclear body (ortholog) 5 11724447 11726322 - 116901299 MODEL JAAIVD010000023;XM_032903097 XP_032758988 chloride intracellular channel protein 3 protein-coding 625948344 Prelp proline and arginine rich end leucine rich repeat protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN cellular senescence (ortholog) 10 1764195 1775828 + 22301074;30032202 116911333 MODEL JAAIVD010000005;XM_032915250 XP_032771141 prolargin protein-coding 625948351 LOC116910746 U2 spliceosomal RNA 9 60913255 60913445 + 116910746 MODEL JAAIVD010000002;XR_004389259 snrna 625948354 LOC116913753 olfactory receptor 2T6-like 12 84029872 84030819 - 22301074 116913753 MODEL JAAIVD010000007;XM_032918061 XP_032773952 protein-coding 625948357 LOC116884570 muscleblind-like protein 3 15 52380855 52381811 - 22301074 116884570 MODEL JAAIVD010000010;XM_032885714 XP_032741605 protein-coding 625948362 Mtnr1b melatonin receptor 1B ENCODES a protein that exhibits melatonin receptor activity (ortholog); INVOLVED IN camera-type eye development (ortholog); glucose homeostasis (ortholog); negative regulation of cGMP-mediated signaling (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); autism spectrum disorder (ortholog); polycystic ovary syndrome (ortholog); FOUND IN plasma membrane (ortholog) 8 11579046 11590453 - 22301074;30032202 116908057 MODEL JAAIVD010000027;XM_032911328 XP_032767219 melatonin receptor type 1B protein-coding 625948366 Pold2 DNA polymerase delta 2, accessory subunit INVOLVED IN DNA biosynthetic process (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN delta DNA polymerase complex (ortholog); nucleoplasm (ortholog); zeta DNA polymerase complex (ortholog) 11 74829498 74834492 - 22301074;30032202 116912026 MODEL JAAIVD010000006;XM_032915914 XP_032771805 DNA polymerase delta subunit 2 protein-coding 625948380 Tm4sf20 transmembrane 4 L six family member 20 INVOLVED IN negative regulation of proteolysis (ortholog); ASSOCIATED WITH Specific Language Impairment 5 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) 4 155611776 155625978 - 22301074;30032202 116899567 MODEL JAAIVD010000003;XM_032901477 XP_032757368 transmembrane 4 L6 family member 20 protein-coding 625948388 LOC116908063 caspase-3-like 8 49801057 49801777 - 116908063 MODEL JAAIVD010000027 pseudo 625948389 LOC116895091 small nucleolar RNA U13 2 92079738 92079850 + 116895091 MODEL JAAIVD010000001 pseudo 625948390 Zfand4 zinc finger AN1-type containing 4 6 30406326 30468193 - 22301074 116903365 MODEL JAAIVD010000024;XM_032905838;XM_032905839;XM_032905840;XM_032905841;XM_032905843;XM_032905844;XM_032905845 XP_032761729;XP_032761730;XP_032761731;XP_032761732;XP_032761734;XP_032761735;XP_032761736 AN1-type zinc finger protein 4 protein-coding 625948423 LOC116902264 uncharacterized LOC116902264 5 130836466 130838055 - 116902264 MODEL JAAIVD010000023 pseudo 625948424 Lrit2 leucine rich repeat, Ig-like and transmembrane domains 2 13 15539923 15544452 + 22301074 116914228 MODEL JAAIVD010000008;XM_032918423 XP_032774314 leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2 protein-coding 625948429 LOC116908274 60S ribosomal protein L21-like 8 113969081 113969590 + 116908274 MODEL JAAIVD010000027 pseudo 625948430 LOC116886480 40S ribosomal protein S24-like 17 29674737 29675388 - 116886480 MODEL JAAIVD010000011 pseudo 625948431 Shisa7 shisa family member 7 ENCODES a protein that exhibits GABA receptor binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); memory (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) 2 177415710 177431277 - 30032202 116892673 MODEL JAAIVD010000001;XM_032894501;XM_032894502;XM_032894503;XM_032894504 XP_032750392;XP_032750393;XP_032750394;XP_032750395 protein shisa-7 protein-coding 625948447 LOC116888231 elongation factor 1-gamma-like 1 78227448 78228746 + 116888231 MODEL JAAIVD010000025 pseudo 625948448 Lrrc45 leucine rich repeat containing 45 FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 9 63297290 63305417 - 22301074;30032202 116909833 MODEL JAAIVD010000002;XM_032913550 XP_032769441 leucine-rich repeat-containing protein 45 protein-coding 625948470 Foxo1 forkhead box O1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); blood vessel development (ortholog); cellular response to dexamethasone stimulus (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alveolar rhabdomyosarcoma (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 102101033 102175674 - 30032202 116896884 MODEL JAAIVD010000012;XM_032898429 XP_032754320 forkhead box protein O1 protein-coding 625948476 Purg purine rich element binding protein G FOUND IN synapse (ortholog) 13 53563095 53592721 - 22301074;30032202 116914924 MODEL JAAIVD010000008;XM_032919355;XM_032919356 XP_032775246;XP_032775247 purine-rich element-binding protein gamma protein-coding 625948488 Rrp15 ribosomal RNA processing 15 homolog 10 64860452 64881320 - 30032202 116911433 MODEL JAAIVD010000005;XM_032915403 XP_032771294 RRP15-like protein protein-coding 625948497 Ddx49 DEAD-box helicase 49 ENCODES a protein that exhibits RNA helicase activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); regulation of rRNA stability (ortholog); FOUND IN nucleoplasm (ortholog) 13 12552331 12560556 - 22301074 116914544 MODEL JAAIVD010000008;XM_032918876 XP_032774767 probable ATP-dependent RNA helicase DDX49 protein-coding 625948514 LOC116913687 gamma-aminobutyric acid receptor-associated protein-like 2 12 48736758 48737370 - 30032202 116913687 MODEL JAAIVD010000007;XM_032917978 XP_032773869 protein-coding 625948519 LOC116887762 U6 spliceosomal RNA 18 44527022 44527125 + 116887762 MODEL JAAIVD010000013;XR_004386262 snrna 625948522 LOC116898304 heterogeneous nuclear ribonucleoprotein A1-like 4 30852537 30855550 - 116898304 MODEL JAAIVD010000003 pseudo 625948523 LOC116914850 HAUS augmin-like complex subunit 8 13 19750589 19753858 + 116914850 MODEL JAAIVD010000008;XM_032919301 XP_032775192 protein-coding 625948533 LOC116901507 uncharacterized LOC116901507 5 48807734 48821356 - 116901507 MODEL JAAIVD010000023;XR_004388003 ncrna 625948537 Fgf10 fibroblast growth factor 10 ENCODES a protein that exhibits chemoattractant activity (ortholog); fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ formation (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); aplasia of lacrimal and salivary glands (ortholog); Breast Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); nucleus (ortholog) 3 177904329 177979537 - 22301074;30032202 116895643 MODEL JAAIVD010000012;XM_032896848 XP_032752739 protein-coding 625948544 Pdk3 pyruvate dehydrogenase kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); hypoxia-inducible factor-1alpha signaling pathway (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease X-linked dominant 6 (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) X 51597009 51664530 + 30032202 116888342 MODEL JAAIVD010000014;XM_032889613 XP_032745504 pyruvate dehydrogenase kinase, isozyme 3 protein-coding 625948561 Pdzd11 PDZ domain containing 11 INVOLVED IN pore complex assembly (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); pore complex (ortholog) X 58373128 58376142 - 22301074;30032202 116888426 MODEL JAAIVD010000014;XM_032889696;XM_032889697 XP_032745587;XP_032745588 PDZ domain-containing protein 11 protein-coding 625948575 LOC116899600 alkaline phosphatase, germ cell type-like 4 159208761 159212505 + 30032202 116899600 MODEL JAAIVD010000003;XM_032901546 XP_032757437 protein-coding 625948590 LOC116906104 glyceraldehyde-3-phosphate dehydrogenase-like 7 75734039 75734994 + 116906104 MODEL JAAIVD010000026 pseudo 625948591 Elp6 elongator acetyltransferase complex subunit 6 INVOLVED IN apoptotic process (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); FOUND IN cytosol (ortholog); elongator holoenzyme complex (ortholog); nucleus (ortholog) 8 100891144 100906199 + 22301074;30032202 116907665 MODEL JAAIVD010000027;XM_032910756 XP_032766647 elongator complex protein 6 protein-coding 625948602 LOC116884063 uncharacterized LOC116884063 14 14485400 14595558 - 116884063 MODEL JAAIVD010000009;XR_004385813 ncrna 625948607 LOC116888343 28S ribosomal protein S36, mitochondrial-like X 105284825 105285082 + 30032202 116888343 MODEL JAAIVD010000014;XM_032889614 XP_032745505 protein-coding 625948610 Erfe erythroferrone ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); establishment of localization in cell (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 4 163362257 163368433 + 30032202 116899638 MODEL JAAIVD010000003;XM_032901633 XP_032757524 protein-coding 625948621 LOC116888205 proteasomal ubiquitin receptor ADRM1-like X 126785345 126811267 - 116888205 MODEL JAAIVD010000014 pseudo 625948622 Lnpep leucyl and cystinyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); neuropeptide catabolic process (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; long term potentiation; ASSOCIATED WITH breast cancer (ortholog); Diabetic Nephropathies (ortholog); Endometrial Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle membrane (ortholog); insulin-responsive compartment (ortholog) 2 101045884 101131711 + 22301074;30032202 116891790 MODEL JAAIVD010000001;XM_032893142 XP_032749033 leucyl-cystinyl aminopeptidase protein-coding 625948644 Hoxc5 homeobox C5 INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog) 1 260066689 260068970 - 22301074;30032202 116883299 MODEL JAAIVD010000025;XM_032884343 XP_032740234 homeobox protein Hox-C5 protein-coding 625948650 Tbc1d5 TBC1 domain family member 5 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); protein-containing complex binding (ortholog); retromer complex binding (ortholog); INVOLVED IN autophagy (ortholog); macroautophagy (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN AP-2 adaptor complex (ortholog); Atg1/ULK1 kinase complex (ortholog); autophagosome (ortholog) 1 57535151 57536183 - 116887754 MODEL JAAIVD010000025;XM_032889319 XP_032745210 protein-coding 625948655 LOC116888566 60S ribosomal protein L32-like X 17947234 17947605 + 22301074;30032202 116888566 MODEL JAAIVD010000014;XM_032889870 XP_032745761 protein-coding 625948658 LOC116904329 uncharacterized LOC116904329 6 64791861 64795354 + 22301074 116904329 MODEL JAAIVD010000024;XM_032907235 XP_032763126 uncharacterized protein LOC116904329 protein-coding 625948663 Ppard peroxisome proliferator activated receptor delta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alcoholic Liver Diseases (ortholog); biliary tract cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 18 5557446 5568796 - 22301074;30032202 116886887 MODEL JAAIVD010000013;XM_032888345 XP_032744236 peroxisome proliferator-activated receptor delta protein-coding 625948673 LOC116885982 U6 spliceosomal RNA 16 35681939 35682045 + 116885982 MODEL JAAIVD010000004;XR_004386061 snrna 625948676 Ubd ubiquitin like modifier D ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN aggresome assembly (ortholog); myeloid dendritic cell differentiation (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Animal Hepatitis (ortholog); Breast Neoplasms (ortholog); celiac disease (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); fibrillar center (ortholog) 18 10141790 10143677 + 22301074;30032202 116887619 MODEL JAAIVD010000013;XM_032889225 XP_032745116 ubiquitin D protein-coding 625948681 LOC116901349 putative fidgetin-like protein 2 5 14989352 14991057 + 116901349 MODEL JAAIVD010000023 pseudo 625948682 LOC116905681 40S ribosomal protein S26-like 7 50287496 50287831 + 116905681 MODEL JAAIVD010000026 pseudo 625948683 LOC116894335 mas-related G-protein coupled receptor member X1 2 152131259 152132272 + 22301074;30032202 116894335 MODEL JAAIVD010000001;XM_032896027 XP_032751918 protein-coding 625948686 Stxbp6 syntaxin binding protein 6 INVOLVED IN SNARE complex assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 7 58462149 58673001 - 22301074;30032202 116905010 MODEL JAAIVD010000026;XM_032907696;XM_032907697 XP_032763587;XP_032763588 syntaxin-binding protein 6 protein-coding 625948700 Psmb9 proteasome 20S subunit beta 9 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to electrical stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); adult respiratory distress syndrome (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytosol (ortholog); proteasome complex (ortholog); proteasome core complex (ortholog) 18 8139601 8145201 + 22301074 116887432 MODEL JAAIVD010000013;XM_032889047 XP_032744938 proteasome subunit beta type-9 protein-coding 625948710 LOC116909363 thymosin beta-10 9 51768071 51768291 - 22301074;30032202 116909363 MODEL JAAIVD010000002;XM_032912911 XP_032768802 protein-coding 625948715 Nkain1 sodium/potassium transporting ATPase interacting 1 ENCODES a protein that exhibits ATPase binding (ortholog); FOUND IN plasma membrane (ortholog) 1 27709261 27753482 - 30032202 116895913 MODEL JAAIVD010000025;XM_032896991 XP_032752882 sodium/potassium-transporting ATPase subunit beta-1-interacting protein 1 protein-coding 625948725 LOC116893509 multifunctional protein ADE2-like 2 187209152 187211195 + 116893509 MODEL JAAIVD010000001 pseudo 625948726 Bhmt2 betaine--homocysteine S-methyltransferase 2 ENCODES a protein that exhibits betaine-homocysteine S-methyltransferase activity (ortholog); S-methylmethionine-homocysteine S-methyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN amino-acid betaine metabolic process (ortholog); L-methionine salvage (ortholog); S-adenosylmethionine metabolic process (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); congenital heart disease (ortholog) 3 202659705 202676284 + 22301074;30032202 116895687 MODEL JAAIVD010000012;XM_032896886;XM_032896887;XM_032896888 XP_032752777;XP_032752778;XP_032752779 S-methylmethionine--homocysteine S-methyltransferase BHMT2 protein-coding 625948744 LOC116889672 50S ribosomal protein L10-like 22301074;30032202 116889672 MODEL JAAIVD010000047;XM_032890563 XP_032746454 protein-coding 625948745 Asip agouti signaling protein ENCODES a protein that exhibits melanocortin receptor binding (ortholog); type 3 melanocortin receptor binding (ortholog); type 4 melanocortin receptor binding (ortholog); INVOLVED IN adult feeding behavior (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; melanocortin system pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); coat/hair pigmentation trait (ortholog); dermatitis (ortholog); FOUND IN extracellular space (ortholog) 5 134333543 134413382 + 22301074;30032202 116900723 MODEL JAAIVD010000023;LC091042;LC091043;LC091044;LC091045;LC091046;LC091047;LC091048;LC091049;LC091050;LC091051;LC091052;LC091053;LC091054;LC091055;LC091056;LC091057;LC091058;LC091059;LC091060;LC091061;LC091062;LC091063;LC091064;LC091065;LC091066;LC091067;LC091068;LC091069;LC091070;LC091071;LC091072;LC091073;LC091074;LC091075;LC091076;LC091077;LC091078;LC091079;LC091080;LC091081;LC091082;LC091083;LC091084;LC091085;LC091086;LC091087;LC091088;LC091089;LC091090;LC091091;LC091092;LC091093;LC091094;LC091095;LC091096;LC091097;LC091098;LC091099;LC091100;LC091101;LC091102;LC091103;LC091104;LC091105;LC091106;LC091107;LC091108;LC091109;LC091110;LC091111;LC091112;LC091113;LC091114;LC091115;LC091116;LC091117;LC091118;LC091119;LC091120;LC091121;LC091122;LC091123;LC091124;LC091125;LC091126;LC091127;LC091128;LC091129;LC091130;LC091131;LC091132;LC091133;LC091134;LC091135;LC091136;LC091137;LC091138;LC091139;LC091140;LC091141;LC091142;LC091143;LC091144;LC091145;LC091146;LC091147;LC091148;LC091149;LC091150;LC091151;LC091152;LC091153;LC091154;LC091155;LC091156;LC091157;LC091158;LC091159;LC091160;LC091161;LC091162;LC091163;LC091164;LC091173;LC091179;LC091182;LC091186;LC091190;LC091191;LC091193;LC091194;LC091195;LC091196;LC091202;LC091203;LC091204;LC091205;LC091206;XM_032902430 BBB21431;BBB21432;BBB21433;BBB21434;BBB21435;BBB21436;BBB21437;BBB21438;BBB21439;BBB21440;BBB21441;BBB21442;BBB21443;BBB21444;BBB21445;BBB21446;BBB21447;BBB21448;BBB21449;BBB21450;BBB21451;BBB21452;BBB21453;BBB21454;BBB21455;BBB21456;BBB21457;BBB21458;BBB21459;BBB21460;BBB21461;BBB21462;BBB21463;BBB21464;BBB21465;BBB21466;BBB21467;BBB21468;BBB21469;BBB21470;BBB21471;BBB21472;BBB21473;BBB21474;BBB21475;BBB21476;BBB21477;BBB21478;BBB21479;BBB21480;BBB21481;BBB21482;BBB21483;BBB21484;BBB21485;BBB21486;BBB21487;BBB21488;BBB21489;BBB21490;BBB21491;BBB21492;BBB21493;BBB21494;BBB21495;BBB21496;BBB21497;BBB21498;BBB21499;BBB21500;BBB21501;BBB21502;BBB21503;BBB21504;BBB21505;BBB21506;BBB21507;BBB21508;BBB21509;BBB21510;BBB21511;BBB21512;BBB21513;BBB21514;BBB21515;BBB21516;BBB21517;BBB21518;BBB21519;BBB21520;BBB21521;BBB21522;BBB21523;BBB21524;BBB21525;BBB21526;BBB21527;BBB21528;BBB21529;BBB21530;BBB21531;BBB21532;BBB21533;BBB21534;BBB21535;BBB21536;BBB21537;BBB21538;BBB21539;BBB21540;BBB21541;BBB21542;BBB21543;BBB21544;BBB21545;BBB21546;BBB21547;BBB21548;BBB21549;BBB21550;BBB21551;BBB21552;BBB21553;BBB21562;BBB21568;BBB21571;BBB21575;BBB21579;BBB21580;BBB21582;BBB21583;BBB21584;BBB21585;BBB21591;BBB21592;BBB21593;BBB21594;BBB21595;XP_032758321 agouti-signaling protein protein-coding 625948753 LOC116888133 high mobility group protein B1-like X 106031028 106045266 - 116888133 MODEL JAAIVD010000014 pseudo 625948754 Spmap2l sperm microtubule associated protein 2 like 11 33762066 33810703 + 116912556 MODEL JAAIVD010000006;XM_032916658 XP_032772549 Thegl testicular haploid expressed gene protein-like;theg spermatid protein like protein-coding 625948767 LOC116891210 acyl-CoA desaturase 2 2 43816891 43863046 + 30032202 116891210 MODEL JAAIVD010000001;XM_032892042;XM_032892043;XM_032892044 XP_032747933;XP_032747934;XP_032747935 acyl-CoA desaturase 4 protein-coding 625948786 LOC116894245 olfactory receptor 14C36-like 2 114525673 114526665 - 22301074;30032202 116894245 MODEL JAAIVD010000001;XM_032895951 XP_032751842 protein-coding 625948789 Pidd1 p53-induced death domain protein 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 75 (ortholog); developmental and epileptic encephalopathy 3 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endopeptidase complex (ortholog) 2 8041933 8047822 + 22301074 116890867 MODEL JAAIVD010000001;XM_032891440;XM_032891441;XM_032891442;XM_032891443;XM_032891444;XM_032891445 XP_032747331;XP_032747332;XP_032747333;XP_032747334;XP_032747335;XP_032747336 p53-induced death domain-containing protein 1 protein-coding 625948825 LOC116899615 sorbitol dehydrogenase-like 4 160087221 160089882 - 116899615 MODEL JAAIVD010000003 pseudo 625948826 Snap25 synaptosome associated protein 25 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); lipid binding (ortholog); myosin binding (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); bipolar disorder (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axonal growth cone (ortholog) 5 116317347 116390077 + 22301074;30032202 116902019 MODEL AB003991;AB003992;JAAIVD010000023;XM_032904291;XM_032904292 BAA20151;BAA20152;XP_032760182;XP_032760183 SNAP-25A;SNAP-25B synaptosomal-associated protein 25 protein-coding 625948842 LOC116893911 pyruvate kinase PKM-like 2 78244303 78245919 - 116893911 MODEL JAAIVD010000001 pseudo 625948843 LOC116893180 MLV-related proviral Env polyprotein-like 2 103624338 103626151 - 116893180 MODEL JAAIVD010000001;XM_032895085 XP_032750976 protein-coding 625948848 LOC116887837 cilia- and flagella-associated protein 47-like X 38021726 38097048 + 116887837 MODEL JAAIVD010000014;XM_032889348 XP_032745239 protein-coding 625948872 Pdia4 protein disulfide isomerase family A member 4 ENCODES a protein that exhibits integrin binding (ortholog); protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); platelet aggregation (ortholog); positive regulation of protein folding (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 6 93067190 93087229 + 22301074;30032202 116903878 MODEL JAAIVD010000024;XM_032906630 XP_032762521 protein disulfide-isomerase A4 protein-coding 625948886 Myh15 myosin heavy chain 15 INVOLVED IN extraocular skeletal muscle development (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); Stroke (ortholog); FOUND IN cytosol (ortholog) 4 33550374 33686278 + 22301074 116898311 MODEL JAAIVD010000003;XM_032899654 XP_032755545 myosin-15 protein-coding 625948930 LOC116895157 40S ribosomal protein S7-like 3 6841679 6844309 + 116895157 MODEL JAAIVD010000012 pseudo 625948931 Fam163a family with sequence similarity 163 member A 10 35495839 35500462 - 116911430 MODEL JAAIVD010000005;XM_032915399 XP_032771290 protein FAM163A protein-coding 625948937 LOC116912548 cytochrome P450 11B1, mitochondrial-like 1 247578358 247584127 - 22301074;30032202 116912548 MODEL JAAIVD010000025;XM_032916652 XP_032772543 protein-coding 625948949 LOC116908214 igE-binding protein-like 8 72778682 72780542 + 22301074 116908214 MODEL JAAIVD010000027;XM_032911489 XP_032767380 protein-coding 625948953 Mycbpap MYCBP associated protein INVOLVED IN chemical synaptic transmission (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog) 9 51018964 51039520 + 116910122 MODEL JAAIVD010000002;XM_032913956 XP_032769847 MYCBP-associated protein protein-coding 625948976 Renbp renin binding protein ENCODES a protein that exhibits ATP binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); N-acetylmannosamine metabolic process (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH COVID-19 (ortholog); dilated cardiomyopathy (ortholog) X 128651841 128661203 + 22301074;30032202 116888664 MODEL JAAIVD010000014;XM_032889959 XP_032745850 N-acylglucosamine 2-epimerase protein-coding 625948991 LOC116902651 small nucleolar RNA U3 5 57810201 57810271 + 116902651 MODEL JAAIVD010000023 pseudo 625948992 Git1 GIT ArfGAP 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); cell redox homeostasis (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN calyx of Held (ortholog); centrosome (ortholog); cytosol (ortholog) 9 96161073 96178792 + 22301074;30032202 116910395 MODEL JAAIVD010000002;XM_032914234 XP_032770125 ARF GTPase-activating protein GIT1 protein-coding 625949016 LOC116889457 U7 small nuclear RNA X 59522607 59522668 - 116889457 MODEL JAAIVD010000014;XR_004386414 snrna 625949019 Tnfsf14 TNF superfamily member 14 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); positive regulation of myoblast differentiation (ortholog); positive regulation of myoblast fusion (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog); multiple sclerosis (ortholog); rheumatoid arthritis (ortholog) 4 88591968 88596286 - 22301074 116898072 MODEL JAAIVD010000003;XM_032899467 XP_032755358 tumor necrosis factor ligand superfamily member 14 protein-coding 625949026 LOC116911324 ubiquitin-conjugating enzyme E2 C-like 10 908437 911014 + 116911324 MODEL JAAIVD010000005 pseudo 625949027 Sptlc3 serine palmitoyltransferase long chain base subunit 3 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN sphingoid biosynthetic process (ortholog); sphingosine biosynthetic process (ortholog); ASSOCIATED WITH sensory peripheral neuropathy (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) 5 118853278 118963997 + 22301074;30032202 116902025 MODEL JAAIVD010000023;XM_032904299 XP_032760190 serine palmitoyltransferase 3 protein-coding 625949043 LOC116904808 U6 spliceosomal RNA 6 83185119 83185225 - 116904808 MODEL JAAIVD010000024;XR_004388459 snrna 625949046 Gimap8 GTPase, IMAP family member 8 INVOLVED IN regulation of T cell apoptotic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 6 92310186 92322247 - 22301074;30032202 116903849 MODEL JAAIVD010000024;XM_032906581 XP_032762472 GTPase IMAP family member 8 protein-coding 625949055 Foxp1 forkhead box P1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cellular response to ionomycin (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH atrial heart septal defect 1 (ortholog); atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleus (ortholog) 6 47758791 48147167 + 30032202 116903469 MODEL JAAIVD010000024;XM_032906021;XM_032906022;XM_032906023;XM_032906024;XM_032906025;XM_032906026;XM_032906028;XM_032906029;XM_032906030;XM_032906031 XP_032761912;XP_032761913;XP_032761914;XP_032761915;XP_032761916;XP_032761917;XP_032761919;XP_032761920;XP_032761921;XP_032761922 forkhead box protein P1 protein-coding 625949101 LOC116900751 uncharacterized LOC116900751 1 75852995 76074466 + 116900751 MODEL JAAIVD010000025;XR_004387948 ncrna 625949106 Ube2v1 ubiquitin conjugating enzyme E2 V1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin conjugating enzyme binding (ortholog); INVOLVED IN error-free postreplication DNA repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of intracellular signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 5 150375315 150398789 + 30032202 116902309 MODEL JAAIVD010000023;XM_032904753 XP_032760644 ubiquitin-conjugating enzyme E2 variant 1 protein-coding 625949114 Tmcc1 transmembrane and coiled-coil domain family 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); endosomal transport (ortholog); endosome fission (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-endosome membrane contact site (ortholog); rough endoplasmic reticulum (ortholog) 6 30578995 30709165 + 30032202 116903372 MODEL JAAIVD010000024;XM_032905857;XM_032905858;XM_032905859 XP_032761748;XP_032761749;XP_032761750 transmembrane and coiled-coil domains protein 1 protein-coding 625949127 Vcpip1 valosin containing protein interacting protein 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); endoplasmic reticulum membrane fusion (ortholog); Golgi organization (ortholog); ASSOCIATED WITH progeria (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 1 144457029 144487849 - 30032202 116903843 MODEL JAAIVD010000025;XM_032906572 XP_032762463 deubiquitinating protein VCIP135 protein-coding 625949134 LOC116910876 transmembrane epididymal protein 1-like 10 33302262 33303170 + 116910876 MODEL JAAIVD010000005;XM_032914641 XP_032770532 protein-coding 625949137 Btbd17 BTB domain containing 17 9 74524589 74530206 + 22301074 116909649 MODEL JAAIVD010000002;XM_032913302 XP_032769193 BTB/POZ domain-containing protein 17 protein-coding 625949144 Cdk5r2 cyclin dependent kinase 5 regulatory subunit 2 ENCODES a protein that exhibits actin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cerebellum development (ortholog); hippocampus development (ortholog); layer formation in cerebral cortex (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); membrane (ortholog) 4 148279620 148282082 + 22301074;30032202 116899514 MODEL JAAIVD010000003;XM_032901369 XP_032757260 cyclin-dependent kinase 5 activator 2 protein-coding 625949149 LOC116905624 splicing factor 3B subunit 4-like 7 19241511 19286001 + 116905624 MODEL JAAIVD010000026 pseudo 625949150 Ehbp1l1 EH domain binding protein 1 like 1 INVOLVED IN cell morphogenesis (ortholog); enucleation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog) 2 1967998 1987628 + 22301074 116890700 MODEL JAAIVD010000001;XM_032891124;XM_032891125;XM_032891126;XM_032891127;XM_032891128 XP_032747015;XP_032747016;XP_032747017;XP_032747018;XP_032747019 EH domain-binding protein 1-like protein 1 protein-coding 625949182 Naa40 N-alpha-acetyltransferase 40, NatD catalytic subunit ENCODES a protein that exhibits histone H2A acetyltransferase activity (ortholog); histone H4 acetyltransferase activity (ortholog); protein N-terminal-serine acetyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 553939 568778 + 30032202 116894799 MODEL JAAIVD010000001;XM_032896459;XM_032896460 XP_032752350;XP_032752351 N-alpha-acetyltransferase 40 protein-coding 625949200 LOC116904721 small nucleolar RNA SNORA17 6 29862590 29862724 + 116904721 MODEL JAAIVD010000024;XR_004388414 snorna 625949203 LOC116901953 uncharacterized LOC116901953 1 100103416 100104671 - 116901953 MODEL JAAIVD010000025 pseudo 625949204 LOC116894916 U7 small nuclear RNA 2 103895932 103895979 + 116894916 MODEL JAAIVD010000001 pseudo 625949205 LOC116904467 EF-hand calcium-binding domain-containing protein 1-like 6 135851501 135861151 + 22301074;30032202 116904467 MODEL JAAIVD010000024;XM_032907279 XP_032763170 protein-coding 625949213 Defb123 defensin beta 123 5 131929909 131940065 + 22301074 116900701 MODEL JAAIVD010000023;XM_032902404 XP_032758295 beta-defensin 123 protein-coding 625949219 Map3k7 mitogen-activated protein kinase kinase kinase 7 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); histone kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); anoikis (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH arteriosclerosis (ortholog); benign hypertensive renal disease (ortholog); brain edema (ortholog); FOUND IN ATAC complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 111003753 111061041 - 22301074;30032202 116902406 MODEL JAAIVD010000025;XM_032904939 XP_032760830 protein-coding 625949240 LOC116902951 vomeronasal type-1 receptor 101-like 6 124151832 124152764 - 116902951 MODEL JAAIVD010000024 pseudo 625949241 Ifng interferon gamma ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation (ortholog); apoptotic process (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acquired immunodeficiency syndrome (ortholog); acute disseminated encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 1 196395380 196400033 + 22301074;30032202 116890029 MODEL JAAIVD010000025;XM_032890807 XP_032746698 protein-coding 625949249 LOC116895763 60S ribosomal protein L5-like 3 45903750 45904412 + 116895763 MODEL JAAIVD010000012 pseudo 625949250 LOC116885610 transmembrane protein 132D-like 16 25979537 26090534 + 116885610 MODEL JAAIVD010000004;XM_032886911 XP_032742802 protein-coding 625949256 Eef1a1 eukaryotic translation elongation factor 1 alpha 1 ENCODES a protein that exhibits calmodulin binding (ortholog); GTPase activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; translation elongation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Burns (ortholog); carcinoma (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 72664717 72668811 - 22301074;30032202 116906562 MODEL JAAIVD010000027;XM_032909275 XP_032765166 elongation factor 1-alpha 1 protein-coding 625949268 LOC116904516 transcription factor BTF3-like 6 6926702 6927501 - 116904516 MODEL JAAIVD010000024 pseudo 625949269 LOC116899888 small nucleolar RNA SNORA17 4 134243968 134244067 + 116899888 MODEL JAAIVD010000003 pseudo 625949270 LOC116913706 olfactory receptor 11G2-like 12 72777981 72778937 - 22301074 116913706 MODEL JAAIVD010000007;XM_032918001 XP_032773892 protein-coding 625949274 Pex39 peroxisomal biogenesis factor 39 4 83092979 83093929 - 116898044 MODEL JAAIVD010000003;XM_032899437 XP_032755328 C4H6orf226 chromosome 4 C6orf226 homolog;uncharacterized protein C6orf226 homolog protein-coding 625949279 LOC116888152 synaptophysin-like protein 1 X 112156996 112157694 - 116888152 MODEL JAAIVD010000014 pseudo 625949280 LOC116902866 taste receptor type 2 member 143 6 97818597 97819481 - 22301074;30032202 116902866 MODEL JAAIVD010000024;XM_032905196 XP_032761087 protein-coding 625949283 LOC116911159 cold shock domain-containing protein E1-like 10 45318022 45320440 + 116911159 MODEL JAAIVD010000005 pseudo 625949284 LOC116893205 heat shock cognate 71 kDa protein-like 2 108011293 108013277 + 116893205 MODEL JAAIVD010000001 pseudo 625949285 Pax7 paired box 7 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cartilage development (ortholog); chromatin remodeling (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH alveolar rhabdomyosarcoma (ortholog); congenital myopathy 19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleus (ortholog) 1 18341378 18437923 + 22301074;30032202 116886498 MODEL JAAIVD010000025;XM_032888005;XM_032888012 XP_032743896;XP_032743903 paired box protein Pax-7 protein-coding 625949298 Cst7 cystatin F ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); negative regulation of microglial cell activation (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) 5 130280349 130288717 + 22301074;30032202 116902094 MODEL JAAIVD010000023;XM_032904391 XP_032760282 cystatin-F protein-coding 625949306 Golt1b golgi transport 1B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein-containing complex (ortholog) 6 141095 154136 + 30032202 116903065 MODEL JAAIVD010000024;XM_032905364;XM_032905365 XP_032761255;XP_032761256 vesicle transport protein GOT1B protein-coding 625949321 LOC116893317 elongin-B-like 2 152396047 152396430 - 116893317 MODEL JAAIVD010000001 pseudo 625949322 Prokr1 prokineticin receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Hyperalgesia (ortholog); long QT syndrome (ortholog) 6 58736545 58744462 + 22301074;30032202 116902739 MODEL JAAIVD010000024;XM_032905086 XP_032760977 protein-coding 625949328 Klhdc8a kelch domain containing 8A 10 3539933 3547039 - 22301074 116911288 MODEL JAAIVD010000005;XM_032915195 XP_032771086 kelch domain-containing protein 8A protein-coding 625949337 LOC116905027 ATP synthase F(0) complex subunit C1, mitochondrial-like 7 64245130 64245528 - 22301074;30032202 116905027 MODEL JAAIVD010000026;XM_032907707 XP_032763598 protein-coding 625949340 Gipr gastric inhibitory polypeptide receptor ENCODES a protein that exhibits gastric inhibitory peptide receptor activity (ortholog); glucagon family peptide binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); endocrine pancreas development (ortholog); ASSOCIATED WITH Body Weight (ortholog); cardiovascular system disease (ortholog); diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 2 171456774 171466794 + 22301074;30032202 116892546 MODEL JAAIVD010000001;XM_032894315 XP_032750206 protein-coding 625949359 Frmpd1 FERM and PDZ domain containing 1 INVOLVED IN establishment of protein localization to membrane (ortholog); light adaption (ortholog); protein transport (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hepatoblastoma (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 1 1225115 1324055 - 22301074 116890804 MODEL JAAIVD010000025;XM_032891292 XP_032747183 FERM and PDZ domain-containing protein 1 protein-coding 625949379 LOC116902153 E3 ubiquitin-protein ligase RBX1 5 133129561 133130058 - 22301074;30032202 116902153 MODEL JAAIVD010000023;XM_032904487 XP_032760378 protein-coding 625949384 LOC116897520 small nucleolar RNA SNORA48 3 122699123 122699265 + 116897520 MODEL JAAIVD010000012;XR_004387536 snorna 625949387 Hapln2 hyaluronan and proteoglycan link protein 2 INVOLVED IN establishment of blood-nerve barrier (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); FOUND IN extracellular matrix (ortholog); node of Ranvier (ortholog) 3 65529623 65535055 + 22301074 116896704 MODEL JAAIVD010000012;XM_032898112;XM_032898113 XP_032754003;XP_032754004 protein-coding 625949402 Nup54 nucleoporin 54 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of nuclear pore (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); protein targeting (ortholog); regulation of protein import into nucleus (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH dystonia 37, early-onset with striatal lesions (ortholog); FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog); protein-containing complex (ortholog) 11 5267705 5285647 - 30032202 116912463 MODEL JAAIVD010000006;XM_032916529;XM_032916530 XP_032772420;XP_032772421 nucleoporin p54 protein-coding 625949422 Stc2 stanniocalcin 2 ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to hypoxia (ortholog); decidualization (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); endometriosis (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 9 4525493 4535955 + 22301074;30032202 116909588 MODEL JAAIVD010000002;XM_032913211 XP_032769102 stanniocalcin-2 protein-coding 625949430 LOC116887972 splicing factor 3A subunit 2-like X 66622324 66623401 + 116887972 MODEL JAAIVD010000014 pseudo 625949431 LOC116889083 F-actin-capping protein subunit alpha-1-like X 27140108 27141010 - 22301074;30032202 116889083 MODEL JAAIVD010000014;XM_032890259 XP_032746150 protein-coding 625949434 C9H17orf67 chromosome 9 C17orf67 homolog 9 81697609 81719034 - 116909959 MODEL JAAIVD010000002;XM_032913734 XP_032769625 uncharacterized protein C17orf67 homolog protein-coding 625949442 Pcnt pericentrin INVOLVED IN brain morphogenesis (ortholog); camera-type eye development (ortholog); cerebellar cortex morphogenesis (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Down syndrome (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 8 106693360 106777712 + 30032202 116907862 MODEL JAAIVD010000027;XM_032911050 XP_032766941 protein-coding 625949486 Cpa6 carboxypeptidase A6 ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); Confusion (ortholog); Developmental Disabilities (ortholog) 1 145099494 145423244 - 22301074;30032202 116889696 MODEL JAAIVD010000025;XM_032890585 XP_032746476 protein-coding 625949500 LOC116899053 uncharacterized LOC116899053 4 68901910 68915640 - 116899053 MODEL JAAIVD010000003;XR_004387685;XR_004387686 ncrna 625949508 Cfap97d2 CFAP97 domain containing 2 13 69977949 69994085 - 116914644 MODEL JAAIVD010000008;XM_032919038 XP_032774929 uncharacterized protein CFAP97D2 protein-coding 625949514 LOC116905398 60S ribosomal protein L6-like 7 119430443 119431370 - 116905398 MODEL JAAIVD010000026;XR_004388521 pseudo 625949517 LOC116896821 vomeronasal type-2 receptor 1 3 91175012 91214690 - 22301074;30032202 116896821 MODEL JAAIVD010000012;XM_032898298 XP_032754189 protein-coding 625949527 LOC116907197 uncharacterized LOC116907197 1 159609808 159615718 + 22301074 116907197 MODEL JAAIVD010000025;XM_032910159 XP_032766050 uncharacterized protein LOC116907197 protein-coding 625949532 LOC116886017 small nucleolar RNA SNORA81 16 24006095 24006274 + 116886017 MODEL JAAIVD010000004;XR_004386086 snorna 625949535 Uggt1 UDP-glucose glycoprotein glucosyltransferase 1 ENCODES a protein that exhibits UDP-glucose:glycoprotein glucosyltransferase activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN protein secretion (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 4 112346168 112456592 - 22301074;30032202 116899284 MODEL JAAIVD010000003;XM_032900915 XP_032756806 UDP-glucose:glycoprotein glucosyltransferase 1 protein-coding 625949580 LOC116889514 small nucleolar RNA SNORA17 X 35127910 35128040 + 116889514 MODEL JAAIVD010000014;XR_004386458 snorna 625949583 Cdh20 cadherin 20 ASSOCIATED WITH syndactyly (ortholog) 10 90758174 91015616 - 22301074;30032202 116911752 MODEL JAAIVD010000005;XM_032915745;XM_032915746 XP_032771636;XP_032771637 cadherin-20 protein-coding 625949602 LOC116898103 interleukin-17A 4 98034251 98037758 + 22301074 116898103 MODEL JAAIVD010000003;XM_032899488 XP_032755379 protein-coding 625949609 Cimap1a ciliary microtubule associated protein 1A INVOLVED IN flagellated sperm motility (ortholog); FOUND IN outer dense fiber (ortholog); sperm flagellum (ortholog) 2 8636015 8638682 - 30032202 116890900 MODEL JAAIVD010000001;XM_032891521 XP_032747412 Odf3 outer dense fiber of sperm tails 3;outer dense fiber protein 3 protein-coding 625949618 LOC116893474 sperm motility kinase X-like 2 180342659 180355891 - 116893474 MODEL JAAIVD010000001 pseudo 625949619 Ppfia1 PPFI scaffold protein A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cortical microtubule organization (ortholog); negative regulation of protein localization to plasma membrane (ortholog); negative regulation of stress fiber assembly (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytosol (ortholog) 2 5170493 5248788 + 22301074;30032202 116890821 MODEL JAAIVD010000001;XM_032891320;XM_032891321;XM_032891322;XM_032891323;XM_032891324;XM_032891325 XP_032747211;XP_032747212;XP_032747213;XP_032747214;XP_032747215;XP_032747216 PTPRF interacting protein alpha 1;liprin-alpha-1 protein-coding 625949663 LOC116884878 60S ribosomal protein L18-like 15 12890404 12910789 - 116884878 MODEL JAAIVD010000010 pseudo 625949664 Fst follistatin ENCODES a protein that exhibits activin binding (ortholog); activin receptor antagonist activity (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); BMP signaling pathway (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 182255109 182261254 + 22301074;30032202 116895646 MODEL JAAIVD010000012;XM_032896850;XM_032896851 XP_032752741;XP_032752742 protein-coding 625949677 Cfap68 cilia and flagella associated protein 68 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axoneme (ortholog); cilium (ortholog) 8 45230509 45235319 - 22301074 116907645 MODEL JAAIVD010000027;XM_032910712;XM_032910713;XM_032910714 XP_032766603;XP_032766604;XP_032766605 C8H11orf1 UPF0686 protein C11orf1 homolog;chromosome 8 C11orf1 homolog protein-coding 625949688 LOC116893460 zinc finger protein 773-like 2 178995623 179002203 - 30032202 116893460 MODEL JAAIVD010000001;XM_032895221 XP_032751112 protein-coding 625949697 LOC116912963 small Cajal body-specific RNA 16 11 75346671 75346857 - 116912963 MODEL JAAIVD010000006;XR_004389530 ncrna 625949700 Zg16b zymogen granule protein 16B INVOLVED IN cell migration (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 9 1243464 1255841 - 30032202 116909667 MODEL JAAIVD010000002;XM_032913321 XP_032769212 zymogen granule protein 16 homolog B protein-coding 625949707 LOC116889675 translation initiation factor IF-2-like 22301074;30032202 116889675 MODEL JAAIVD010000048;XM_032890565 XP_032746456 protein-coding 625949708 LOC116911851 small nucleolar RNA SNORD19 10 1211232 1211292 - 116911851 MODEL JAAIVD010000005;XR_004389374 snorna 625949711 Iapp islet amyloid polypeptide ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor 2 signaling pathway (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); gastric ulcer (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN extracellular space (ortholog); inclusion body (ortholog); neuronal cell body (ortholog) 6 52067 57528 + 22301074;30032202 116903062 MODEL JAAIVD010000024;XM_032905360 XP_032761251 protein-coding 625949717 Itga2 integrin subunit alpha 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); cell-substrate adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute retinal necrosis syndrome (ortholog); arteriosclerosis (ortholog); Behcet's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); basal part of cell (ortholog) 3 181794006 181881118 + 22301074;30032202 116897179 MODEL JAAIVD010000012;XM_032898865 XP_032754756 integrin alpha-2 protein-coding 625949751 Vars1 valyl-tRNA synthetase 1 ENCODES a protein that exhibits valine-tRNA ligase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 18 7600580 7616189 + 22301074;30032202 116887092 MODEL JAAIVD010000013;XM_032888603 XP_032744494 valine--tRNA ligase protein-coding 625949785 LOC116907760 guanylate cyclase soluble subunit alpha-2-like 8 420892 443006 - 22301074;30032202 116907760 MODEL JAAIVD010000027;XM_032910898 XP_032766789 protein-coding 625949791 Sema3a semaphorin 3A ENCODES a protein that exhibits chemorepellent activity (ortholog); neuropilin binding (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN axon extension involved in axon guidance (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Delayed Puberty (ortholog); FOUND IN axon (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); dendrite (ortholog) 6 144021609 144219712 + 30032202 116904153 MODEL JAAIVD010000024;XM_032907051 XP_032762942 semaphorin-3A protein-coding 625949813 Mlx MAX dimerization protein MLX ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nucleocytoplasmic transport (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); Takayasu's arteritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 9 60381839 60386632 + 22301074;30032202 116909323 MODEL JAAIVD010000002;XM_032912862;XM_032912863 XP_032768753;XP_032768754 max-like protein X protein-coding 625949828 LOC116905817 synaptophysin-like protein 1 7 8809820 8810525 - 116905817 MODEL JAAIVD010000026 pseudo 625949829 Slc43a3 solute carrier family 43 member 3 ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); fatty acid transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN hypoxanthine transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); IgA glomerulonephritis (ortholog); FOUND IN basolateral plasma membrane (ortholog) 5 62302572 62322783 + 22301074 116900228 MODEL JAAIVD010000023;XM_032901979 XP_032757870 protein-coding 625949846 LOC116888185 microfibrillar-associated protein 1-like X 120188279 120200419 - 116888185 MODEL JAAIVD010000014 pseudo 625949847 LOC116912986 small nucleolar RNA SNORA17 11 25634270 25634397 - 116912986 MODEL JAAIVD010000006;XR_004389549 snorna 625949850 Nrm nurim ASSOCIATED WITH alcohol dependence (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog) 18 9072485 9076100 + 30032202 116887471 MODEL JAAIVD010000013;XM_032889079;XM_032889080;XM_032889081 XP_032744970;XP_032744971;XP_032744972 protein-coding 625949866 Cdhr4 cadherin related family member 4 8 99323176 99330778 + 22301074 116907847 MODEL JAAIVD010000027;XM_032911035 XP_032766926 cadherin-related family member 4 protein-coding 625949889 LOC116914457 heat shock protein HSP 90-beta-like 13 55549846 55551650 - 116914457 MODEL JAAIVD010000008 pseudo 625949890 LOC116902129 60S ribosomal protein L7a-like 1 107590401 107591171 - 116902129 MODEL JAAIVD010000025 pseudo 625949891 LOC116894182 olfactory receptor 473 2 105977841 105978773 + 22301074;30032202 116894182 MODEL JAAIVD010000001;XM_032895899 XP_032751790 protein-coding 625949894 LOC116914339 voltage-dependent anion-selective channel protein 1-like 13 49910355 49979795 - 116914339 MODEL JAAIVD010000008 pseudo 625949895 LOC116893747 GTP-binding nuclear protein Ran-like 2 25597110 25597626 + 116893747 MODEL JAAIVD010000001 pseudo 625949896 Kcmf1 potassium channel modulatory factor 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); HRI-mediated signaling (ortholog); negative regulation of HRI-mediated signaling (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 3 90999167 91000843 + 22301074;30032202 116896817 MODEL JAAIVD010000012;XM_032898292 XP_032754183 E3 ubiquitin-protein ligase KCMF1 protein-coding 625949901 Klc3 kinesin light chain 3 ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatid development (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 2 171216872 171226439 + 22301074;30032202 116892533 MODEL JAAIVD010000001;XM_032894293 XP_032750184 protein-coding 625949918 LOC116910980 uncharacterized LOC116910980 10 93477811 93480030 + 116910980 MODEL JAAIVD010000005 pseudo 625949919 LOC116886957 inactive serine/threonine-protein kinase VRK3-like 18 33140537 33141009 + 116886957 MODEL JAAIVD010000013 pseudo 625949920 Sppl3 signal peptide peptidase like 3 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein proteolysis (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi-associated vesicle membrane (ortholog) 16 38726931 38809897 - 22301074;30032202 116885954 MODEL JAAIVD010000004;XM_032887272 XP_032743163 signal peptide peptidase-like 3 protein-coding 625949935 Stra6 signaling receptor and transporter of retinol STRA6 ENCODES a protein that exhibits retinol transmembrane transporter activity (ortholog); INVOLVED IN adrenal gland development (ortholog); alveolar primary septum development (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Anophthalmia (ortholog); Cardiovascular Abnormalities (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 8 52011401 52030850 + 22301074;30032202 116906766 MODEL JAAIVD010000027;XM_032909610 XP_032765501 receptor for retinol uptake STRA6 protein-coding 625949958 Rplp1 ribosomal protein lateral stalk subunit P1 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to Thyroid stimulating hormone (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 8 56218302 56219656 - 1742361;22301074;30032202 116907266 MODEL JAAIVD010000027;X15097;XM_032910222 CAA33200;XP_032766113 60S acidic ribosomal protein P1 protein-coding 625949965 Laptm4b lysosomal protein transmembrane 4 beta ENCODES a protein that exhibits ceramide binding (ortholog); kinase binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); negative regulation of lysosomal protein catabolic process (ortholog); FOUND IN cell projection (ortholog); early endosome (ortholog); endosome (ortholog) 1 207938347 207981363 + 30032202 116910453 MODEL JAAIVD010000025;XM_032914322 XP_032770213 lysosomal-associated transmembrane protein 4B protein-coding 625949976 LOC116895847 NEDD8-activating enzyme E1 catalytic subunit-like 3 85866387 85867667 + 116895847 MODEL JAAIVD010000012 pseudo 625949977 Rnf5 ring finger protein 5 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of autophagy (ortholog); protein catabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 18 7284004 7286542 - 30032202 116886828 MODEL JAAIVD010000013;XM_032888262 XP_032744153 E3 ubiquitin-protein ligase RNF5 protein-coding 625949987 Atp6v0a4 ATPase H+ transporting V0 subunit a4 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN ossification (ortholog); proton transmembrane transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); Distal Renal Tubular Acidosis (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) 6 101686567 101766047 + 22301074;30032202 116903954 MODEL JAAIVD010000024;XM_032906741;XM_032906742 XP_032762632;XP_032762633 V-type proton ATPase 116 kDa subunit a protein-coding 625950017 LOC116894407 keratin-associated protein 23-1 2 158535400 158535882 + 116894407 MODEL JAAIVD010000001;XM_032896113 XP_032752004 protein-coding 625950022 LOC116904729 small nucleolar RNA SNORA17 6 90545314 90545444 + 116904729 MODEL JAAIVD010000024;XR_004388419 snorna 625950025 LOC116883185 PRELI domain-containing protein 1, mitochondrial-like 14 34418905 34419717 + 116883185 MODEL JAAIVD010000009 pseudo 625950026 LOC116914322 40S ribosomal protein S8-like 13 44556141 44558038 - 116914322 MODEL JAAIVD010000008 pseudo 625950027 LOC116891808 olfactory receptor 51E2 2 102685938 102703921 - 22301074 116891808 MODEL JAAIVD010000001;XM_032893164;XM_032893165 XP_032749055;XP_032749056 protein-coding 625950037 LOC116893894 cardiotrophin-2 2 74173352 74181254 + 116893894 MODEL JAAIVD010000001;XM_032895613 XP_032751504 protein-coding 625950043 LOC116889927 olfactory receptor 6C2-like 1 160863987 160864919 - 22301074;30032202 116889927 MODEL JAAIVD010000025;XM_032890740 XP_032746631 protein-coding 625950046 LOC116893976 lysophospholipase-like protein 1 2 100627274 100627954 + 116893976 MODEL JAAIVD010000001 pseudo 625950047 Cltc clathrin heavy chain ENCODES a protein that exhibits ankyrin binding (ortholog); clathrin light chain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FasL mediated signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); autosomal dominant intellectual developmental disorder 56 (ortholog); Developmental Disabilities (ortholog); FOUND IN centriolar satellite (ortholog); clathrin coat (ortholog); clathrin complex (ortholog) 9 84023834 84080666 + 22301074;30032202 116909608 MODEL JAAIVD010000002;XM_032913230;XM_032913231 XP_032769121;XP_032769122 clathrin heavy chain 1 protein-coding 625950088 Snapc5 small nuclear RNA activating complex polypeptide 5 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH long QT syndrome (ortholog); RASopathy (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 8 58484264 58487156 + 22301074;30032202 116907674 MODEL JAAIVD010000027;XM_032910768 XP_032766659 snRNA-activating protein complex subunit 5 protein-coding 625950095 LOC116885055 small nucleolar RNA SNORA17 15 15606179 15606308 - 116885055 MODEL JAAIVD010000010;XR_004385939 snorna 625950098 Timm21 translocase of inner mitochondrial membrane 21 INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) 15 47418362 47423042 + 22301074;30032202 116884576 MODEL JAAIVD010000010;XM_032885718 XP_032741609 mitochondrial import inner membrane translocase subunit Tim21 protein-coding 625950108 LOC116904655 small nucleolar RNA SNORA71 6 100370312 100370435 + 116904655 MODEL JAAIVD010000024;XR_004388355 snorna 625950111 LOC116912429 high mobility group protein B1-like 11 21415817 21416511 - 116912429 MODEL JAAIVD010000006 pseudo 625950112 Derl3 derlin 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 18 11549596 11552152 - 30032202 116886821 MODEL JAAIVD010000013;XM_032888251;XM_032888252;XM_032888253;XM_032888254 XP_032744142;XP_032744143;XP_032744144;XP_032744145 derlin-3 protein-coding 625950130 Rab20 RAB20, member RAS oncogene family INVOLVED IN cellular response to type II interferon (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog); phagocytic vesicle (ortholog) 13 72380780 72405171 + 22301074;30032202 116914881 MODEL JAAIVD010000008;XM_032919324 XP_032775215 ras-related protein Rab-20 protein-coding 625950136 Igsf11 immunoglobulin superfamily member 11 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); maintenance of protein location (ortholog); positive regulation of long-term synaptic potentiation (ortholog); FOUND IN cell-cell junction (ortholog); excitatory synapse (ortholog); glutamatergic synapse (ortholog) 4 23819457 23945900 + 30032202 116898851 MODEL JAAIVD010000003;XM_032900205 XP_032756096 protein-coding 625950147 Pgk2 phosphoglycerate kinase 2 ENCODES a protein that exhibits phosphoglycerate kinase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); glycolytic process (ortholog); FOUND IN cilium (ortholog); sperm fibrous sheath (ortholog) 4 95426938 95428501 + 22301074;30032202 116898094 MODEL JAAIVD010000003;XM_032899480 XP_032755371 protein-coding 625950152 LOC116903784 60S ribosomal protein L15-like 6 88218830 88220194 + 116903784 MODEL JAAIVD010000024 pseudo 625950153 Rubcn rubicon autophagy regulator ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of autophagosome maturation (ortholog); negative regulation of autophagy (ortholog); negative regulation of endocytosis (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 15 (ortholog); Developmental Disabilities (ortholog); spinocerebellar ataxia type 15 (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) 4 17627756 17673586 - 30032202 116898784 MODEL JAAIVD010000003;XM_032900122 XP_032756013 run domain Beclin-1-interacting and cysteine-rich domain-containing protein protein-coding 625950179 LOC116915138 U2 spliceosomal RNA 13 51372488 51372671 - 116915138 MODEL JAAIVD010000008;XR_004389814 snrna 625950182 LOC116888634 uncharacterized LOC116888634 X 13443722 13474784 - 116888634 MODEL JAAIVD010000014;XR_004386331 ncrna 625950187 Patl1 PAT1 homolog 1, processing body mRNA decay factor ENCODES a protein that exhibits poly(G) binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); P-body assembly (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 2 12002756 12033281 + 30032202 116890986 MODEL JAAIVD010000001;XM_032891659 XP_032747550 protein PAT1 homolog 1 protein-coding 625950210 LOC116901021 cystatin-S-like 5 128796054 128804789 + 116901021 MODEL JAAIVD010000023 pseudo 625950211 Piwil1 piwi like RNA-mediated gene silencing 1 ENCODES a protein that exhibits mRNA binding (ortholog); mRNA cap binding complex binding (ortholog); piRNA binding (ortholog); INVOLVED IN piRNA-mediated gene silencing by mRNA destabilization (ortholog); primary piRNA processing (ortholog); sperm DNA condensation (ortholog); ASSOCIATED WITH male infertility (ortholog); substance-related disorder (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); dense body (ortholog) 16 25218332 25234717 - 22301074;30032202 116885561 MODEL JAAIVD010000004;XM_032886854 XP_032742745 piwi-like protein 1 protein-coding 625950233 LOC116895171 keratin, type II cytoskeletal 8-like 3 78496421 78497735 - 116895171 MODEL JAAIVD010000012 pseudo 625950234 Podxl podocalyxin like INVOLVED IN cell migration (ortholog); epithelial tube formation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); early-onset Parkinson's disease (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); centriolar satellite (ortholog) 6 108030912 108077982 + 22301074;30032202 116903991 MODEL JAAIVD010000024;XM_032906797 XP_032762688 podocalyxin protein-coding 625950245 LOC116912690 histone H2B type 1-K-like 11 17845832 17850116 + 116912690 MODEL JAAIVD010000006 pseudo 625950246 Gtse1 G2 and S-phase expressed 1 ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 1 255206589 255223516 + 30032202 116914716 MODEL JAAIVD010000025;XM_032919149 XP_032775040 G2 and S phase-expressed protein 1 protein-coding 625950262 LOC116907167 nucleolar RNA helicase 2-like 1 159463987 159466155 - 116907167 MODEL JAAIVD010000025 pseudo 625950263 F11r F11 receptor ENCODES a protein that exhibits integrin binding (ortholog); PDZ domain binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); cell adhesion (ortholog); cell differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atherosclerosis (ortholog); breast cancer (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); plasma membrane (ortholog) 10 50609112 50633112 + 30032202 116911373 MODEL JAAIVD010000005;XM_032915304 XP_032771195 junctional adhesion molecule A protein-coding 625950277 LOC116902560 small nucleolar RNA SNORA48 5 91456682 91456815 + 116902560 MODEL JAAIVD010000023 pseudo 625950278 Iars1 isoleucyl-tRNA synthetase 1 ENCODES a protein that exhibits GTPase binding (ortholog); isoleucine-tRNA ligase activity (ortholog); INVOLVED IN isoleucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); GROWTH RETARDATION, INTELLECTUAL DEVELOPMENTAL DISORDER, HYPOTONIA, AND HEPATOPATHY (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 68653047 68700058 + 22301074;30032202 116883352 MODEL JAAIVD010000009;XM_032884430 XP_032740321 isoleucine--tRNA ligase, cytoplasmic protein-coding 625950316 LOC116885116 small nucleolar RNA SNORA13 15 10538403 10538536 - 116885116 MODEL JAAIVD010000010;XR_004385979 snorna 625950319 LOC116894506 cone-rod homeobox protein-like 2 173221773 173232067 + 22301074;30032202 116894506 MODEL JAAIVD010000001;XM_032896211 XP_032752102 protein-coding 625950326 LOC116901966 speckle-type POZ protein-like 5 109985402 109996244 - 30032202 116901966 MODEL JAAIVD010000023;XM_032904204 XP_032760095 protein-coding 625950334 LOC116895321 transmembrane protein 258-like 3 31367367 31367606 + 22301074;30032202 116895321 MODEL JAAIVD010000012;XM_032896630 XP_032752521 protein-coding 625950337 LOC116914357 uncharacterized LOC116914357 13 65731009 65801173 + 116914357 MODEL JAAIVD010000008 pseudo 625950338 LOC116893455 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178467059 178468429 - 116893455 MODEL JAAIVD010000001 pseudo 625950339 LOC116900728 small nuclear ribonucleoprotein E-like 5 136689719 136689986 - 116900728 MODEL JAAIVD010000023 pseudo 625950340 Cep83 centrosomal protein 83 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); establishment of centrosome localization (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH ciliopathy (ortholog); genetic disease (ortholog); megacolon (ortholog); FOUND IN centriole (ortholog); ciliary transition fiber (ortholog); Golgi apparatus (ortholog) 1 173857811 173968529 + 30032202 116908331 MODEL JAAIVD010000025;XM_032911613;XM_032911614;XM_032911615 XP_032767504;XP_032767505;XP_032767506 centrosomal protein of 83 kDa protein-coding 625950370 S100a8 S100 calcium binding protein A8 INVOLVED IN astrocyte development (ortholog); autocrine signaling (ortholog); autophagy (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); FOUND IN calprotectin complex (ortholog); cytosol (ortholog); extracellular space (ortholog) 3 62941873 62942388 - 22301074;30032202 116895418 MODEL JAAIVD010000012;XM_032896700 XP_032752591 protein S100-A8 protein-coding 625950376 LOC116893117 deleted in malignant brain tumors 1 protein-like 2 70858425 70889961 - 22301074;30032202 116893117 MODEL JAAIVD010000001;XM_032895055 XP_032750946 protein-coding 625950392 LOC116904490 PEST proteolytic signal-containing nuclear protein-like 6 151108330 151109421 + 116904490 MODEL JAAIVD010000024 pseudo 625950393 Myo1a myosin IA ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN cell projection organization (ortholog); microvillus assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 48 (ortholog); congenital diarrhea (ortholog); congenital diarrhea 15 (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 1 206151805 206168447 + 22301074;30032202 116910228 MODEL JAAIVD010000025;XM_032914122 XP_032770013 unconventional myosin-Ia protein-coding 625950425 Crybg2 crystallin beta-gamma domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) 1 24148551 24167868 - 116894888 MODEL JAAIVD010000025;XM_032896501 XP_032752392 beta/gamma crystallin domain-containing protein 2 protein-coding 625950447 LOC116906453 small nucleolar RNA SNORA17 7 69897109 69897238 + 116906453 MODEL JAAIVD010000026;XR_004388709 snorna 625950450 Gba1 glucosylceramidase beta 1 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); autophagosome organization (ortholog); autophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Gaucher's disease (ortholog); Gaucher's disease perinatal lethal (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 3 64468266 64474451 - 22301074;30032202 116896661 MODEL JAAIVD010000012;XM_032897997 XP_032753888 Gba lysosomal acid glucosylceramidase protein-coding 625950465 LOC116885206 mucin-17-like 16 16874311 16885307 + 116885206 MODEL JAAIVD010000004;XM_032886439 XP_032742330 protein-coding 625950479 Nmral1 NmrA like redox sensor 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN nucleoplasm (ortholog) 9 17166064 17175161 + 116909876 MODEL JAAIVD010000002;XM_032913612;XM_032913613 XP_032769503;XP_032769504 nmrA-like family domain-containing protein 1 protein-coding 625950491 LOC116897109 uncharacterized LOC116897109 3 162801785 162810632 + 116897109 MODEL JAAIVD010000012;XR_004387396 ncrna 625950496 LOC116898112 60S ribosomal protein L23a-like 4 100567410 100567872 + 116898112 MODEL JAAIVD010000003 pseudo 625950497 LOC116894393 keratin-associated protein 20-2-like 2 157144700 157144903 + 116894393 MODEL JAAIVD010000001;XM_032896100 XP_032751991 protein-coding 625950500 Ccr4 C-C motif chemokine receptor 4 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); homeostasis of number of cells (ortholog); inflammatory response (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); brain ischemia (ortholog); FOUND IN external side of plasma membrane (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 8 105096120 105097202 - 22301074;30032202 116908139 MODEL JAAIVD010000027;XM_032911432 XP_032767323 C-C chemokine receptor type 4 protein-coding 625950503 Klf13 KLF transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of erythrocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 15q13.3 microdeletion syndrome (ortholog); congenital heart disease (ortholog); endometriosis (ortholog) 2 136432096 136475456 + 30032202 116892011 MODEL JAAIVD010000001;XM_032893472 XP_032749363 Krueppel-like factor 13;Kruppel like factor 13 protein-coding 625950509 LOC116885059 small nucleolar RNA SNORA17 15 11648181 11648305 + 116885059 MODEL JAAIVD010000010 pseudo 625950510 LOC116888164 integrator complex subunit 6-like X 116712704 116764174 - 30032202 116888164 MODEL JAAIVD010000014;XM_032889487 XP_032745378 protein-coding 625950533 Ifrd2 interferon related developmental regulator 2 ENCODES a protein that exhibits ribosome binding (ortholog); translation repressor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); negative regulation of translation (ortholog) 8 98904765 98909972 + 116907536 MODEL JAAIVD010000027;XM_032910555 XP_032766446 interferon-related developmental regulator 2 protein-coding 625950549 LOC116911855 U4atac minor spliceosomal RNA 10 11045073 11045197 - 116911855 MODEL JAAIVD010000005;XR_004389377 snrna 625950552 LOC116890492 small nucleolar RNA SNORA48 1 213023827 213023969 + 116890492 MODEL JAAIVD010000025;XR_004386679 snorna 625950555 Mypn myopalladin ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); muscle alpha-actinin binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN sarcomere organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Cap Myopathy (ortholog); FOUND IN cytosol (ortholog); I band (ortholog); nucleoplasm (ortholog) 18 23494515 23580811 + 116887392 MODEL JAAIVD010000013;XM_032888986;XM_032888987 XP_032744877;XP_032744878 protein-coding 625950582 Pttg1 PTTG1 regulator of sister chromatid separation, securin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heat shock protein binding (ortholog); molecular function activator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Pituitary Neoplasms (ortholog); psoriasis (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 9 26245259 26256623 - 22301074;30032202 116908983 MODEL JAAIVD010000002;XM_032912453;XM_032912454 XP_032768344;XP_032768345 securin protein-coding 625950595 Ppp2r5a protein phosphatase 2 regulatory subunit B'alpha ENCODES a protein that exhibits kinase binding (ortholog); kinase inhibitor activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN negative regulation of protein localization to plasma membrane (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Emphysema (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 69440708 69491395 - 22301074;30032202 116911780 MODEL JAAIVD010000005;XM_032915773 XP_032771664 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit alpha isoform protein-coding 625950612 Clip3 CAP-Gly domain containing linker protein 3 ENCODES a protein that exhibits ganglioside binding (ortholog); microtubule binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); membrane biogenesis (ortholog); negative regulation of microtubule polymerization (ortholog); FOUND IN early endosome membrane (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 2 165698597 165714746 - 30032202 116892327 MODEL JAAIVD010000001;XM_032893951;XM_032893952 XP_032749842;XP_032749843 CAP-Gly domain-containing linker protein 3 protein-coding 625950634 LOC116891371 MAPK-interacting and spindle-stabilizing protein 2 62973170 62983547 + 116891371 MODEL JAAIVD010000001;XM_032892369;XM_032892371 XP_032748260;XP_032748262 protein-coding 625950642 LOC116885808 olfactory receptor 13C7 1 2714222 2715169 + 22301074 116885808 MODEL JAAIVD010000025;XM_032887146 XP_032743037 protein-coding 625950645 Rnf25 ring finger protein 25 ENCODES a protein that exhibits NF-kappaB binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of NF-kappaB transcription factor activity (ortholog); protein K6-linked ubiquitination (ortholog); protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) 4 148033202 148040125 - 22301074;30032202 116899508 MODEL JAAIVD010000003;XM_032901361;XM_032901362;XM_032901363 XP_032757252;XP_032757253;XP_032757254 E3 ubiquitin-protein ligase RNF25 protein-coding 625950666 LOC116915203 uncharacterized LOC116915203 14 76585044 76589776 - 116915203 MODEL JAAIVD010000009;XR_004389855 ncrna 625950671 LOC116885873 olfactory receptor 13C7-like 1 2798341 2799291 + 22301074 116885873 MODEL JAAIVD010000025;XM_032887201 XP_032743092 protein-coding 625950674 Tmx1 thioredoxin related transmembrane protein 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); enzyme inhibitor activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN negative regulation of platelet aggregation (ortholog); negative regulation of triglyceride biosynthetic process (ortholog); positive regulation of ERAD pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 7 84116729 84127759 + 116905134 MODEL JAAIVD010000026;XM_032907894 XP_032763785 thioredoxin-related transmembrane protein 1 protein-coding 625950686 LOC116884888 glyceraldehyde-3-phosphate dehydrogenase-like 1 212009786 212010509 - 116884888 MODEL JAAIVD010000025 pseudo 625950687 LOC116906431 small nucleolar RNA SNORA48 7 19251616 19251763 - 116906431 MODEL JAAIVD010000026;XR_004388692 snorna 625950690 Dgkb diacylglycerol kinase beta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog) 7 51149152 51863944 + 22301074;30032202 116904984 MODEL JAAIVD010000026;XM_032907661 XP_032763552 protein-coding 625950720 Fhl5 four and a half LIM domains 5 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH migraine (ortholog) 1 152328361 152364099 - 30032202 116905965 MODEL JAAIVD010000025;XM_032909014 XP_032764905 four and a half LIM domains protein 5 protein-coding 625950730 LOC116905049 centrin-4-like 7 68058909 68059673 - 116905049 MODEL JAAIVD010000026 pseudo 625950731 LOC116894229 protein FAM98A-like 2 108626254 108627707 + 116894229 MODEL JAAIVD010000001 pseudo 625950732 Ccdc63 coiled-coil domain containing 63 INVOLVED IN spermatid development (ortholog); ASSOCIATED WITH melanoma (ortholog) 16 31697198 31726652 + 30032202 116885651 MODEL JAAIVD010000004;XM_032886956 XP_032742847 coiled-coil domain-containing protein 63 protein-coding 625950748 Sorcs1 sortilin related VPS10 domain containing receptor 1 ASSOCIATED WITH Alzheimer's disease 6 (ortholog); prostate cancer (ortholog); proteinuria (ortholog); FOUND IN membrane (ortholog) 2 49612314 50119457 - 22301074;30032202 116891278 MODEL JAAIVD010000001;XM_032892178;XM_032892179;XM_032892180;XM_032892181 XP_032748069;XP_032748070;XP_032748071;XP_032748072 VPS10 domain-containing receptor SorCS1 protein-coding 625950787 LOC116887058 vesicle transport protein SFT2A-like 18 11488803 11489456 + 22301074;30032202 116887058 MODEL JAAIVD010000013;XM_032888549 XP_032744440 protein-coding 625950792 LOC116887513 ubiquitin-40S ribosomal protein S27a-like 18 20482979 20483461 + 22301074;30032202 116887513 MODEL JAAIVD010000013;XM_032889137 XP_032745028 protein-coding 625950796 LOC116894669 trace amine-associated receptor 7a-like 2 210050752 210051818 - 22301074;30032202 116894669 MODEL JAAIVD010000001;XM_032896372 XP_032752263 protein-coding 625950800 LOC116913069 uncharacterized LOC116913069 12 77452111 77453401 - 116913069 MODEL JAAIVD010000007;XR_004389590 ncrna 625950804 LOC116889417 U6 spliceosomal RNA X 99226081 99226187 + 116889417 MODEL JAAIVD010000014;XR_004386382 snrna 625950807 Nox3 NADPH oxidase 3 ENCODES a protein that exhibits heme binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); INVOLVED IN detection of gravity (ortholog); otolith development (ortholog); response to gravity (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); NADPH oxidase complex (ortholog); plasma membrane (ortholog) 2 195069035 195133907 + 30032202 116894634 MODEL JAAIVD010000001;XM_032896350 XP_032752241 protein-coding 625950823 Arl6 ARF like GTPase 6 INVOLVED IN brain development (ortholog); cilium assembly (ortholog); fat cell differentiation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 3 (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 43438779 43468066 - 22301074;30032202 116898923 MODEL JAAIVD010000003;XM_032900332;XM_032900333 XP_032756223;XP_032756224 ADP ribosylation factor like GTPase 6;ADP-ribosylation factor-like protein 6;ARL6 interacting reticulophagy regulator 1 protein-coding 625950838 LOC116894896 U6 spliceosomal RNA 2 228453119 228453221 - 116894896 MODEL JAAIVD010000001;XR_004387101 snrna 625950841 LOC116893788 cytochrome P450 26A1 ENCODES a protein that exhibits all-trans retinoic acid 18-hydroxylase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); retinoic acid 4-hydroxylase activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cellular response to retinoic acid (ortholog); central nervous system development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH actinic keratosis (ortholog); adenocarcinoma (ortholog); Barrett's adenocarcinoma (ortholog) 2 36060638 36064306 - 22301074;30032202 116893788 MODEL JAAIVD010000001;XM_032895492 XP_032751383 protein-coding 625950851 LOC116891620 non-structural maintenance of chromosomes element 1 homolog 1 54895673 54916328 + 116891620 MODEL JAAIVD010000025 pseudo 625950852 LOC116897756 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical]-like 4 5931995 5938525 + 116897756 MODEL JAAIVD010000003 pseudo 625950853 LOC116885320 zinc finger protein 664-like 1 13092806 13096192 + 116885320 MODEL JAAIVD010000025 pseudo 625950854 LOC116888751 protein ARMCX6-like X 87028905 87029559 + 30032202 116888751 MODEL JAAIVD010000014;XM_032890044 XP_032745935 protein-coding 625950858 Ifitm5 interferon induced transmembrane protein 5 INVOLVED IN bone mineralization (ortholog); bone morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 5 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 8531121 8532183 + 30032202 116890892 MODEL JAAIVD010000001;XM_032891507 XP_032747398 interferon-induced transmembrane protein 5 protein-coding 625950863 LOC116888892 actin, cytoplasmic 2-like X 122161849 122162975 - 116888892 MODEL JAAIVD010000014 pseudo 625950864 LOC116911616 FANCD2 opposite strand protein-like 10 28665802 28666455 + 116911616 MODEL JAAIVD010000005;XM_032915587 XP_032771478 protein-coding 625950867 Gprin1 G protein regulated inducer of neurite outgrowth 1 ENCODES a protein that exhibits phosphoprotein binding (ortholog); INVOLVED IN neuron projection development (ortholog); FOUND IN plasma membrane (ortholog) 14 73081017 73092807 - 30032202 116915228 MODEL JAAIVD010000009;XM_032919616 XP_032775507 G protein-regulated inducer of neurite outgrowth 1 protein-coding 625950873 Crygc crystallin gamma C INVOLVED IN camera-type eye development (ortholog); eye development (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 2 multiple types (ortholog); retinal degeneration (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 138962784 138964812 - 30032202 116899458 MODEL JAAIVD010000003;XM_032901241;XM_032901242;XM_032901243 XP_032757132;XP_032757133;XP_032757134 gamma-crystallin C protein-coding 625950889 LOC116889062 oligosaccharyltransferase complex subunit OSTC-like X 12340115 12340631 + 116889062 MODEL JAAIVD010000014 pseudo 625950890 LOC116890343 U6 spliceosomal RNA 1 136338606 136338714 + 116890343 MODEL JAAIVD010000025;XR_004386565 snrna 625950893 LOC116893500 vomeronasal type-2 receptor 116-like 2 185086389 185091915 - 22301074;30032202 116893500 MODEL JAAIVD010000001;XM_032895241 XP_032751132 protein-coding 625950900 LOC116901826 bifunctional peptidase and (3S)-lysyl hydroxylase Jmjd7 5 98181100 98196616 + 22301074;30032202 116901826 MODEL JAAIVD010000023;XM_032903987;XM_032903988;XM_032903989;XM_032903990 XP_032759878;XP_032759879;XP_032759880;XP_032759881 cytosolic phospholipase A2 beta protein-coding 625950939 LOC116890298 U2 spliceosomal RNA 1 228411784 228411938 - 116890298 MODEL JAAIVD010000025 pseudo 625950940 Ccr6 C-C motif chemokine receptor 6 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell chemotaxis (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atherosclerosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); sperm flagellum (ortholog) 2 187102854 187125270 + 22301074;30032202 116894624 MODEL JAAIVD010000001;XM_032896339;XM_032896340 XP_032752230;XP_032752231 C-C chemokine receptor type 6 protein-coding 625950951 LOC116908461 U6 spliceosomal RNA 8 56825408 56825514 + 116908461 MODEL JAAIVD010000027;XR_004388979 snrna 625950954 Eid3 EP300 interacting inhibitor of differentiation 3 FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); Smc5-Smc6 complex (ortholog) 1 165576680 165578595 - 30032202 116907596 MODEL JAAIVD010000025;XM_032910647 XP_032766538 EP300-interacting inhibitor of differentiation 3 protein-coding 625950959 Bpifb2 BPI fold containing family B member 2 5 133209197 133227677 + 22301074 116901045 MODEL JAAIVD010000023;XM_032902627 XP_032758518 BPI fold-containing family B member 2 protein-coding 625950978 Rnf114 ring finger protein 114 ASSOCIATED WITH male infertility (ortholog); psoriasis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 150480182 150491635 - 30032202 116902310 MODEL JAAIVD010000023;XM_032904754 XP_032760645 E3 ubiquitin-protein ligase RNF114 protein-coding 625950988 Ncr3lg1 natural killer cell cytotoxicity receptor 3 ligand 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN NK T cell activation (ortholog); FOUND IN plasma membrane (ortholog) 2 153421108 153427895 - 30032202 116892111 MODEL JAAIVD010000001;XM_032893590 XP_032749481 natural cytotoxicity triggering receptor 3 ligand 1 protein-coding 625950996 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 88352989 88353060 - 116889589 MODEL JAAIVD010000014 trna 625950997 LOC116908047 olfactory receptor 8D1-like 8 32690322 32691281 + 22301074;30032202 116908047 MODEL JAAIVD010000027;XM_032911322 XP_032767213 protein-coding 625951000 LOC116904498 HAUS augmin-like complex subunit 8 6 158502720 158511595 - 116904498 MODEL JAAIVD010000024 pseudo 625951001 LOC116898573 peptidyl-prolyl cis-trans isomerase D-like 4 160336415 160337734 - 116898573 MODEL JAAIVD010000003 pseudo 625951002 Ptx3 pentraxin 3 ENCODES a protein that exhibits (1->3)-beta-D-glucan binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cystic fibrosis (ortholog); Diabetic Foot (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 3 88939157 88944961 - 30032202 116896808 MODEL JAAIVD010000012;XM_032898282 XP_032754173 pentraxin-related protein PTX3 protein-coding 625951009 Efr3a EFR3 homolog A INVOLVED IN protein localization to plasma membrane (ortholog); synaptic vesicle priming (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 1 239947342 240035838 + 30032202 116912178 MODEL JAAIVD010000025;XM_032916112 XP_032772003 protein EFR3 homolog A protein-coding 625951036 Prkg2 protein kinase cGMP-dependent 2 ENCODES a protein that exhibits cGMP-dependent protein kinase activity (ortholog); identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN cellular hypotonic response (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acromesomelic dysplasia 4 (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN nuclear membrane (ortholog); plasma membrane (ortholog) 11 9186448 9290268 - 22301074 116912195 MODEL JAAIVD010000006;XM_032916130 XP_032772021 cGMP-dependent protein kinase 2 protein-coding 625951059 Slc14a1 solute carrier family 14 member 1 (Kidd blood group) ENCODES a protein that exhibits urea channel activity (ortholog); urea transmembrane transporter activity (ortholog); water transmembrane transporter activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); urea transmembrane transport (ortholog); urea transport (ortholog); ASSOCIATED WITH autoimmune hemolytic anemia (ortholog); hemolytic disease of the fetus (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 15 54026589 54051027 + 22301074;30032202 116884736 MODEL JAAIVD010000010;XM_032885950;XM_032885951 XP_032741841;XP_032741842 urea transporter 1 protein-coding 625951076 LOC116904415 GTPase RhebL1-like 6 103607033 103607567 + 116904415 MODEL JAAIVD010000024 pseudo 625951077 Nsd2 nuclear receptor binding SET domain protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K36 trimethyltransferase activity (ortholog); INVOLVED IN atrial septum primum morphogenesis (ortholog); atrial septum secundum morphogenesis (ortholog); bone development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 70948764 71022972 - 22301074;30032202 116912567 MODEL JAAIVD010000006;XM_032916668;XM_032916670;XM_032916671;XM_032916672;XM_032916673;XM_032916674;XM_032916675;XM_032916676;XM_032916677;XM_032916678;XM_032916679;XM_032916680;XM_032916681 XP_032772559;XP_032772561;XP_032772562;XP_032772563;XP_032772564;XP_032772565;XP_032772566;XP_032772567;XP_032772568;XP_032772569;XP_032772570;XP_032772571;XP_032772572 histone-lysine N-methyltransferase NSD2 protein-coding 625951129 LOC116894075 olfactory receptor 51G2-like 2 103024915 103025859 + 22301074 116894075 MODEL JAAIVD010000001;XM_032895798 XP_032751689 protein-coding 625951133 LOC116913307 dehydrogenase/reductase SDR family member 4 12 69519561 69531670 - 30032202 116913307 MODEL JAAIVD010000007;XM_032917443;XR_004389604 XP_032773334 protein-coding 625951149 LOC116892755 vomeronasal type-2 receptor 116-like 2 181978233 181998637 + 22301074;30032202 116892755 MODEL JAAIVD010000001;XM_032894633 XP_032750524 protein-coding 625951157 Ivd isovaleryl-CoA dehydrogenase ENCODES a protein that exhibits 3-methylbutanoyl-CoA dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); L-leucine catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 97038148 97059606 + 22301074;30032202 116901790 MODEL JAAIVD010000023;XM_032903938 XP_032759829 isovaleryl-CoA dehydrogenase, mitochondrial protein-coding 625951173 Fbh1 F-box DNA helicase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); DNA helicase activity (ortholog); DNA translocase activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 14 17778928 17818062 - 22301074;30032202 116915232 MODEL JAAIVD010000009;XM_032919620;XM_032919621;XM_032919622;XM_032919623 XP_032775511;XP_032775512;XP_032775513;XP_032775514 protein-coding 625951208 Insc INSC spindle orientation adaptor protein ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); FOUND IN cell cortex (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 2 86692679 86797661 - 22301074;30032202 116891629 MODEL JAAIVD010000001;XM_032892842;XM_032892843 XP_032748733;XP_032748734 protein inscuteable homolog protein-coding 625951229 Rnaseh1 ribonuclease H1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA-DNA hybrid ribonuclease activity (ortholog); INVOLVED IN mitochondrial DNA replication (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 7 42100311 42109567 + 22301074;30032202 116904930 MODEL JAAIVD010000026;XM_032907560;XM_032907561 XP_032763451;XP_032763452 protein-coding 625951244 Lims1 LIM zinc finger domain containing 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction organization (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; FOUND IN cell-cell junction (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) 18 24457511 24563852 + 22301074;30032202 116886898 MODEL JAAIVD010000013;XM_032888358;XM_032888359;XM_032888360;XM_032888361;XM_032888363;XM_032888364 XP_032744249;XP_032744250;XP_032744251;XP_032744252;XP_032744254;XP_032744255 LIM and senescent cell antigen-like-containing domain protein 1 protein-coding 625951276 LOC116895990 uncharacterized LOC116895990 3 166091851 166096860 - 22301074 116895990 MODEL JAAIVD010000012;XM_032897020 XP_032752911 uncharacterized protein LOC116895990 protein-coding 625951280 LOC116896614 uncharacterized LOC116896614 3 63361691 63366196 + 116896614 MODEL JAAIVD010000012;XR_004387349 ncrna 625951285 LOC116907605 putative olfactory receptor 10D4 8 82440401 82441345 + 22301074 116907605 MODEL JAAIVD010000027;XM_032910655 XP_032766546 protein-coding 625951288 LOC116892442 cytochrome P450 2F3-like 2 168784721 168788698 - 22301074;30032202 116892442 MODEL JAAIVD010000001;XM_032894137;XM_032894138 XP_032750028;XP_032750029 cytochrome P450 2F2-like protein-coding 625951302 LOC116884865 protocadherin beta-11-like 15 1127427 1131338 + 22301074 116884865 MODEL JAAIVD010000010;XM_032886104 XP_032741995 protein-coding 625951307 LOC116901736 forkhead box protein K2-like 5 90460003 90461977 + 22301074;30032202 116901736 MODEL JAAIVD010000023;XM_032903873 XP_032759764 protein-coding 625951312 Tnmd tenomodulin INVOLVED IN cellular response to BMP stimulus (ortholog); endothelial cell morphogenesis (ortholog); negative regulation of angiogenesis (ortholog) X 86180136 86195443 + 30032202 116889008 MODEL JAAIVD010000014;XM_032890217 XP_032746108 protein-coding 625951322 LOC116911135 dimethylaniline monooxygenase [N-oxide-forming] 3 10 42227634 42246304 - 22301074;30032202 116911135 MODEL JAAIVD010000005;XM_032914984 XP_032770875 protein-coding 625951335 LOC116887219 olfactory receptor 2H2-like 18 10115977 10117230 - 22301074 116887219 MODEL JAAIVD010000013;XM_032888779 XP_032744670 protein-coding 625951340 Mettl4 methyltransferase 4, N6-adenosine ENCODES a protein that exhibits RNA methyltransferase activity (ortholog); site-specific DNA-methyltransferase (adenine-specific) activity (ortholog); INVOLVED IN negative regulation of gene expression, epigenetic (ortholog); regulation of mitochondrial DNA replication (ortholog); regulation of mitochondrial transcription (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); nucleus (ortholog) 4 180986359 181006523 + 22301074;30032202 116899722 MODEL JAAIVD010000003;XM_032901761;XM_032901762 XP_032757652;XP_032757653 N(6)-adenine-specific DNA methyltransferase METTL4;methyltransferase like 4 protein-coding 625951354 LOC116894170 olfactory receptor 10A5 2 105152249 105153214 + 22301074 116894170 MODEL JAAIVD010000001;XM_032895886 XP_032751777 protein-coding 625951358 Ntf4 neurotrophin 4 INVOLVED IN adult locomotory behavior (ortholog); ameloblast differentiation (ortholog); epidermis development (ortholog); ASSOCIATED WITH asthma (ortholog); autistic disorder (ortholog); genetic disease (ortholog) 2 154092641 154096058 - 22301074;30032202 116894340 MODEL JAAIVD010000001;XM_032896036 XP_032751927 neurotrophin-4 protein-coding 625951365 Arrdc4 arrestin domain containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN extracellular vesicle biogenesis (ortholog); positive regulation of interferon-beta production (ortholog); positive regulation of ubiquitin-protein transferase activity (ortholog); FOUND IN endosome (ortholog); extracellular vesicle (ortholog); plasma membrane (ortholog) 2 131575061 131588417 + 30032202 116891977 MODEL JAAIVD010000001;XM_032893419 XP_032749310 arrestin domain-containing protein 4 protein-coding 625951377 LOC116887106 keratin-associated protein 10-8-like 18 1098088 1098926 - 22301074;30032202 116887106 MODEL JAAIVD010000013;XM_032888640 XP_032744531 protein-coding 625951381 Otud4 OTU deubiquitinase 4 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); DNA alkylation repair (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN cytosol (ortholog) 17 20419260 20467219 - 30032202 116886666 MODEL JAAIVD010000011;XM_032888157;XM_032888158;XM_032888159;XM_032888160 XP_032744048;XP_032744049;XP_032744050;XP_032744051 OTU domain-containing protein 4 protein-coding 625951418 LOC116891209 acyl-CoA desaturase 3 2 43741899 43761575 + 30032202 116891209 MODEL JAAIVD010000001;XM_032892041 XP_032747932 protein-coding 625951426 Mrnip MRN complex interacting protein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN Mre11 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 32841586 32865896 + 30032202 116908490 MODEL JAAIVD010000002;XM_032911648 XP_032767539 MRN complex-interacting protein protein-coding 625951437 LOC116886643 optic atrophy 3 protein homolog 17 19576779 19577292 - 116886643 MODEL JAAIVD010000011 pseudo 625951438 Crebbp CREB binding lysine acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); cAMP response element binding protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); histone acetyltransferase complex (ortholog) 9 17656950 17780021 + 22301074;30032202 116909647 MODEL JAAIVD010000002;XM_032913295;XM_032913297;XM_032913298 XP_032769186;XP_032769188;XP_032769189 CREB binding protein;CREB-binding protein protein-coding 625951478 C1r complement C1r ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome periodontal type 1 (ortholog); Ehlers-Danlos syndrome periodontal type 2 (ortholog); FOUND IN complement component C1 complex (ortholog); extracellular space (ortholog); symbiont cell surface (ortholog) 6 23264839 23275780 - 22301074;30032202 116903290 MODEL JAAIVD010000024;XM_032905712 XP_032761603 complement C1r subcomponent protein-coding 625951493 Snx7 sorting nexin 7 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome (ortholog) 3 41873636 41959207 + 22301074 116896319 MODEL JAAIVD010000012;XM_032897414 XP_032753305 sorting nexin-7 protein-coding 625951506 Neurog3 neurogenin 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN enteroendocrine cell differentiation (ortholog); epithelial cell differentiation (ortholog); forebrain development (ortholog); ASSOCIATED WITH congenital malabsorptive diarrhea 4 (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 18 27957685 27959552 + 22301074 116887291 MODEL JAAIVD010000013;XM_032888872 XP_032744763 neurogenin-3 protein-coding 625951511 LOC116912972 U1 spliceosomal RNA 11 91176130 91176259 - 116912972 MODEL JAAIVD010000006 pseudo 625951512 Csde1 cold shock domain containing E1 ENCODES a protein that exhibits lncRNA binding (ortholog); RISC complex binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 3 54979552 55006721 - 22301074 116896451 MODEL JAAIVD010000012;XM_032897608;XM_032897609 XP_032753499;XP_032753500 cold shock domain-containing protein E1 protein-coding 625951540 Cfap65 cilia and flagella associated protein 65 INVOLVED IN flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); schizophrenia (ortholog); spermatogenic failure 40 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) 4 148321685 148351037 - 116898542 MODEL JAAIVD010000003;XM_032899757 XP_032755648 cilia- and flagella-associated protein 65 protein-coding 625951574 LOC116896249 zinc finger protein 728-like 3 28436680 28446686 + 22301074;30032202 116896249 MODEL JAAIVD010000012;XM_032897319;XM_032897320 XP_032753210;XP_032753211 protein-coding 625951587 Cgnl1 cingulin like 1 INVOLVED IN actin filament organization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); apical junction complex (ortholog); bicellular tight junction (ortholog) 8 65918398 66068814 - 22301074 116907378 MODEL JAAIVD010000027;XM_032910331 XP_032766222 cingulin-like protein 1 protein-coding 625951610 LOC116900014 coiled-coil domain-containing protein 187-like 5 10787243 10809445 + 30032202 116900014 MODEL JAAIVD010000023;XM_032901814 XP_032757705 protein-coding 625951622 Eif5 eukaryotic translation initiation factor 5 ENCODES a protein that exhibits eukaryotic initiation factor eIF2 binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); formation of translation preinitiation complex (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 129128125 129136546 + 22301074;30032202 116905490 MODEL JAAIVD010000026;XM_032908489;XM_032908490 XP_032764380;XP_032764381 protein-coding 625951641 Dipk2b divergent protein kinase domain 2B ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); X-Linked Intellectual Developmental Disorders (ortholog) X 1985732 2044584 + 116888939 MODEL JAAIVD010000014;XM_032890176 XP_032746067 protein-coding 625951649 LOC116884145 small nucleolar RNA SNORA24 14 68679696 68679814 + 116884145 MODEL JAAIVD010000009 pseudo 625951650 Snrnp200 small nuclear ribonucleoprotein U5 subunit 200 ENCODES a protein that exhibits helicase activity (ortholog); identical protein binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosome conformational change to release U4 (or U4atac) and U1 (or U11) (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cilium (ortholog); nucleoplasm (ortholog) 5 105989638 106019620 + 22301074;30032202 116901929 MODEL JAAIVD010000023;XM_032904152 XP_032760043 U5 small nuclear ribonucleoprotein 200 kDa helicase protein-coding 625951699 LOC116902782 multifunctional protein ADE2-like 6 76594488 76595817 - 22301074 116902782 MODEL JAAIVD010000024;XM_032905124 XP_032761015 protein-coding 625951703 Usp49 ubiquitin specific peptidase 49 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); histone binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) 4 82195210 82263698 - 22301074;30032202 116899078 MODEL JAAIVD010000003;XM_032900574;XM_032900576;XM_032900577;XM_032900578;XM_032900579 XP_032756465;XP_032756467;XP_032756468;XP_032756469;XP_032756470 ubiquitin carboxyl-terminal hydrolase 49 protein-coding 625951726 LOC116889478 small nucleolar RNA SNORA1 X 102961329 102961465 + 116889478 MODEL JAAIVD010000014;XR_004386429 snorna 625951729 Rbm46 RNA binding motif protein 46 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cell cycle switching, mitotic to meiotic cell cycle (ortholog); female meiotic nuclear division (ortholog); male meiotic nuclear division (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 70631679 70675085 + 30032202 116896747 MODEL JAAIVD010000012;XM_032898189;XM_032898190 XP_032754080;XP_032754081 probable RNA-binding protein 46 protein-coding 625951741 LOC116903007 igE-binding protein-like 6 146709919 146711155 + 116903007 MODEL JAAIVD010000024 pseudo 625951742 Nectin3 nectin cell adhesion molecule 3 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell-cell adhesion (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH cataract (ortholog); Teratozoospermia (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axon (ortholog) 4 31094384 31191558 - 22301074;30032202 116898884 MODEL JAAIVD010000003;XM_032900259;XM_032900260 XP_032756150;XP_032756151 nectin-3 protein-coding 625951760 Actr6 actin related protein 6 INVOLVED IN nucleolus organization (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN nucleolus (ortholog) 1 168791467 168812081 - 30032202 116907923 MODEL JAAIVD010000025;XM_032911139 XP_032767030 actin-related protein 6 protein-coding 625951775 Gpkow G-patch domain and KOW motifs ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH X-linked Microhydranencephaly (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) X 14419994 14432083 - 30032202 116889006 MODEL JAAIVD010000014;XM_032890216 XP_032746107 G-patch domain and KOW motifs-containing protein protein-coding 625951791 LOC116892273 uncharacterized LOC116892273 2 163478978 163479887 + 116892273 MODEL JAAIVD010000001;XR_004386935 ncrna 625951795 Hcrt hypocretin neuropeptide precursor ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); type 1 orexin receptor binding (ortholog); type 2 orexin receptor binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); drinking behavior (ortholog); eating behavior (ortholog); PARTICIPATES IN orexin/hypocretin signaling pathway; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 1; orexin/hypocretin signaling pathway via orexin/hypocretin receptor 2; ASSOCIATED WITH alcohol use disorder (ortholog); cannabis dependence (ortholog); cocaine abuse (ortholog); FOUND IN neuronal dense core vesicle lumen (ortholog); perinuclear region of cytoplasm (ortholog); secretory granule (ortholog) 9 60054119 60055385 - 22301074;30032202 116909524 MODEL JAAIVD010000002;XM_032913132 XP_032769023 orexin protein-coding 625951801 Gsg1 germ cell associated 1 ENCODES a protein that exhibits RNA polymerase binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 14175238 14192095 + 30032202 116903159 MODEL JAAIVD010000024;XM_032905527 XP_032761418 germ cell-specific gene 1 protein protein-coding 625951811 LOC116906457 small nucleolar RNA SNORA17 7 11215934 11216065 - 116906457 MODEL JAAIVD010000026;XR_004388713 snorna 625951814 LOC116890502 small nucleolar RNA SNORA48 1 193211975 193212114 - 116890502 MODEL JAAIVD010000025;XR_004386688 snorna 625951817 Mpzl1 myelin protein zero like 1 INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog) 10 44704633 44742331 - 22301074;30032202 116911143 MODEL JAAIVD010000005;XM_032914995;XM_032914996 XP_032770886;XP_032770887 myelin protein zero-like protein 1 protein-coding 625951829 LOC116883832 zinc finger protein 431-like 14 76724005 76817806 + 22301074 116883832 MODEL JAAIVD010000009;XM_032885093;XM_032885094;XR_004385794;XR_004385795 XP_032740984;XP_032740985 protein-coding 625951842 Vcf1 VCP nuclear cofactor family member 1 9 75622845 75644373 + 116909179 MODEL JAAIVD010000002;XM_032912670;XM_032912671 XP_032768561;XP_032768562 Fam104a family with sequence similarity 104 member A;protein FAM104A protein-coding 625951852 LOC116910997 gem-associated protein 8-like 10 93594285 93594999 + 116910997 MODEL JAAIVD010000005 pseudo 625951853 LOC116887389 glutathione S-transferase theta-1 18 11641009 11656215 + 30032202 116887389 MODEL JAAIVD010000013;XM_032888983 XP_032744874 protein-coding 625951862 Unc13c unc-13 homolog C ENCODES a protein that exhibits calmodulin binding (ortholog); syntaxin binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); negative regulation of synaptic plasticity (ortholog); synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH clubfoot (ortholog); FOUND IN calyx of Held (ortholog); parallel fiber to Purkinje cell synapse (ortholog); presynapse (ortholog) 8 67814095 68257974 - 22301074;30032202 116907079 MODEL JAAIVD010000027;XM_032910033 XP_032765924 protein unc-13 homolog C protein-coding 625951898 LOC116909860 uncharacterized LOC116909860 9 62819333 62820461 - 116909860 MODEL JAAIVD010000002;XR_004389104 ncrna 625951902 Endov endonuclease V ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity, producing 5'-phosphomonoesters (ortholog); magnesium ion binding (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleolus (ortholog) 9 64514065 64530048 - 22301074;30032202 116909713 MODEL JAAIVD010000002;XM_032913383;XM_032913384;XM_032913385 XP_032769274;XP_032769275;XP_032769276 protein-coding 625951923 LOC116888119 39S ribosomal protein L30, mitochondrial-like X 102900288 102900858 - 116888119 MODEL JAAIVD010000014 pseudo 625951924 LOC116896495 PRELI domain-containing protein 1, mitochondrial 3 60502781 60503639 + 30032202 116896495 MODEL JAAIVD010000012;XM_032897670;XM_032897671 XP_032753561;XP_032753562 protein-coding 625951934 Asb8 ankyrin repeat and SOCS box containing 8 1 270946122 270956650 - 22301074;30032202 116884669 MODEL JAAIVD010000025;XM_032885845;XM_032885853;XM_032885861 XP_032741736;XP_032741744;XP_032741752 ankyrin repeat and SOCS box protein 8 protein-coding 625951949 LOC116909704 60S ribosomal protein L37-like 9 94079449 94079742 - 116909704 MODEL JAAIVD010000002 pseudo 625951950 Hdhd3 haloacid dehalogenase like hydrolase domain containing 3 FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 1 91030552 91034192 + 116901374 MODEL JAAIVD010000025;XM_032903244 XP_032759135 haloacid dehalogenase-like hydrolase domain-containing protein 3 protein-coding 625951956 Lrrc56 leucine rich repeat containing 56 ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Costello syndrome (ortholog) 2 8268210 8283763 - 22301074 116890881 MODEL JAAIVD010000001;XM_032891478;XM_032891479;XM_032891480;XM_032891481;XM_032891482;XM_032891484;XM_032891485 XP_032747369;XP_032747370;XP_032747371;XP_032747372;XP_032747373;XP_032747375;XP_032747376 leucine-rich repeat-containing protein 56 protein-coding 625951989 Itpr1 inositol 1,4,5-trisphosphate receptor type 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion transport (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anterior segment dysgenesis (ortholog); asthma (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); dendrite (ortholog) 6 38248197 38571331 - 22301074 116903440 MODEL JAAIVD010000024;XM_032905993 XP_032761884 protein-coding 625952055 Smg8 SMG8 nonsense mediated mRNA decay factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of protein kinase activity (ortholog); ASSOCIATED WITH ALZAHRANI-KUWAHARA SYNDROME (ortholog); genetic disease (ortholog) 9 83710790 83719378 + 22301074;30032202 116909707 MODEL JAAIVD010000002;XM_032913377 XP_032769268 protein SMG8 protein-coding 625952063 LOC116885099 U7 small nuclear RNA 15 29299319 29299381 + 116885099 MODEL JAAIVD010000010;XR_004385966 snrna 625952066 Ddx52 DExD-box helicase 52 9 86715748 86738534 - 22301074;30032202 116910105 MODEL JAAIVD010000002;XM_032913933 XP_032769824 probable ATP-dependent RNA helicase DDX52 protein-coding 625952085 Scnn1g sodium channel epithelial 1 subunit gamma ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic ion channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to aldosterone (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive pseudohypoaldosteronism type 1 (ortholog); bronchiectasis 3 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 2 80034079 80067560 - 22301074;30032202 116893912 MODEL JAAIVD010000001;XM_032895635 XP_032751526 amiloride-sensitive sodium channel subunit gamma protein-coding 625952102 Lmntd2 lamin tail domain containing 2 INVOLVED IN positive regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog) 2 8262400 8268275 + 30032202 116890880 MODEL JAAIVD010000001;XM_032891475;XM_032891476;XM_032891477 XP_032747366;XP_032747367;XP_032747368 lamin tail domain-containing protein 2 protein-coding 625952127 LOC116887966 uncharacterized LOC116887966 X 66374793 66376742 - 116887966 MODEL JAAIVD010000014 pseudo 625952128 LOC116912917 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like 11 32014046 32014413 + 116912917 MODEL JAAIVD010000006 pseudo 625952129 Insrr insulin receptor related receptor ENCODES a protein that exhibits transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to alkaline pH (ortholog); male sex determination (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN receptor complex (ortholog) 3 65745019 65764304 - 22301074;30032202 116896714 MODEL JAAIVD010000012;XM_032898133 XP_032754024 insulin receptor-related protein protein-coding 625952155 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41774929 41775009 + 116884214 MODEL JAAIVD010000009 trna 625952156 Vmo1 vitelline membrane outer layer 1 homolog ASSOCIATED WITH renal cell carcinoma (ortholog) 9 50127896 50129215 - 30032202 116909623 MODEL JAAIVD010000002;XM_032913252 XP_032769143 vitelline membrane outer layer protein 1 homolog protein-coding 625952163 LOC116885449 myosin light polypeptide 6-like 16 26737782 26738398 - 22301074;30032202 116885449 MODEL JAAIVD010000004;XM_032886733 XP_032742624 protein-coding 625952168 Upf3b UPF3B regulator of nonsense mediated mRNA decay ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN brain development (ortholog); neuron projection development (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH cataract (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) X 103275236 103293305 - 30032202 116888449 MODEL JAAIVD010000014;XM_032889726;XM_032889727;XM_032889728 XP_032745617;XP_032745618;XP_032745619 regulator of nonsense transcripts 3B protein-coding 625952191 LOC116890336 U6 spliceosomal RNA 1 25489207 25489313 + 116890336 MODEL JAAIVD010000025;XR_004386558 snrna 625952194 LOC116898554 60S ribosomal protein L18-like 1 40580371 40580923 + 116898554 MODEL JAAIVD010000025 pseudo 625952195 Znf358 zinc finger protein 358 16 1422512 1426612 + 30032202 116885681 MODEL JAAIVD010000004;XM_032886987 XP_032742878 protein-coding 625952201 LOC116913575 toll-like receptor 11 12 72882874 72887936 - 22301074;30032202 116913575 MODEL JAAIVD010000007;XM_032917794 XP_032773685 protein-coding 625952207 LOC116904766 U1 spliceosomal RNA 6 154797166 154797317 - 116904766 MODEL JAAIVD010000024 pseudo 625952208 Nagpa N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase INVOLVED IN secretion of lysosomal enzymes (ortholog); ASSOCIATED WITH Familial Persistent Stuttering 2 (ortholog) 9 16707706 16715951 + 116909234 MODEL JAAIVD010000002;XM_032912735 XP_032768626 protein-coding 625952221 LOC116902869 TRPM8 channel-associated factor 3 6 98216903 98231207 - 30032202 116902869 MODEL JAAIVD010000024;XM_032905199 XP_032761090 protein-coding 625952233 Znf131 zinc finger protein 131 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog) 3 177121352 177149763 + 22301074;30032202 116897163 MODEL JAAIVD010000012;XM_032898835;XM_032898836;XM_032898837;XM_032898838;XM_032898839;XM_032898840 XP_032754726;XP_032754727;XP_032754728;XP_032754729;XP_032754730;XP_032754731 protein-coding 625952261 LOC116896431 40S ribosomal protein S2-like 3 53608600 53609475 + 116896431 MODEL JAAIVD010000012;XR_004387336 pseudo 625952264 Ptn pleiotrophin ENCODES a protein that exhibits carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to D-galactosamine (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenal carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Body Weight (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 6 103063457 103146178 + 22301074;30032202 116903962 MODEL JAAIVD010000024;XM_032906756 XP_032762647 protein-coding 625952273 Csnk2a1 casein kinase 2 alpha 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN aggrephagy (ortholog); cerebral cortex development (ortholog); deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 131563975 131610422 + 22301074;30032202 116902115 MODEL JAAIVD010000023;XM_032904428;XM_032904429;XM_032904430;XM_032904431 XP_032760319;XP_032760320;XP_032760321;XP_032760322 casein kinase II subunit alpha protein-coding 625952298 LOC116887684 SIN3-HDAC complex-associated factor-like 18 45033769 45034127 - 116887684 MODEL JAAIVD010000013 pseudo 625952299 Dis3 DIS3 exosome endoribonuclease and 3''-5'' exoribonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); endonuclease activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH multiple myeloma (ortholog); Perlman syndrome (ortholog); FOUND IN cytosol (ortholog); nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog) 12 25413711 25440055 + 22301074;30032202 116913582 MODEL JAAIVD010000007;XM_032917808;XM_032917810 XP_032773699;XP_032773701 DIS3 homolog, exosome endoribonuclease and 3'-5' exoribonuclease;exosome complex exonuclease RRP44 protein-coding 625952328 Cd80 CD80 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of T cell mediated immunity (ortholog); positive regulation of alpha-beta T cell proliferation (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); protein complex involved in cell adhesion (ortholog) 4 23411721 23430767 + 22301074;30032202 116898844 MODEL JAAIVD010000003;XM_032900199 XP_032756090 T-lymphocyte activation antigen CD80 protein-coding 625952335 Gabrd gamma-aminobutyric acid type A receptor subunit delta ENCODES a protein that exhibits GABA-A receptor activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); cocaine dependence (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); GABA-A receptor complex (ortholog) 1 5310049 5322116 + 22301074;30032202 116891967 MODEL JAAIVD010000025;XM_032893413;XM_032893420 XP_032749304;XP_032749311 gamma-aminobutyric acid receptor subunit delta protein-coding 625952351 LOC116906218 Ig heavy chain V region 441-like 7 121502328 121504620 - 116906218 MODEL JAAIVD010000026 pseudo 625952352 Pcp2 Purkinje cell protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN G protein-coupled opsin signaling pathway (ortholog) 16 1548035 1550097 - 22301074;30032202 116885370 MODEL JAAIVD010000004;XM_032886644;XM_032886645 XP_032742535;XP_032742536 Purkinje cell protein 2 homolog protein-coding 625952363 LOC116889577 U6 spliceosomal RNA X 14253391 14253493 - 116889577 MODEL JAAIVD010000014;XR_004386493 snrna 625952366 LOC116884524 HIG1 domain family member 1A, mitochondrial-like 15 63335537 63335982 - 30032202 116884524 MODEL JAAIVD010000010;XM_032885659 XP_032741550 protein-coding 625952371 LOC116909938 serine protease 30 9 1270024 1274068 - 22301074 116909938 MODEL JAAIVD010000002;XM_032913712 XP_032769603 protein-coding 625952382 Ly9 lymphocyte antigen 9 INVOLVED IN positive regulation of interleukin-17 production (ortholog); T-helper 17 cell lineage commitment (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 10 50759699 50778878 - 30032202 116911565 MODEL JAAIVD010000005;XM_032915555;XM_032915556 XP_032771446;XP_032771447 T-lymphocyte surface antigen Ly-9 protein-coding 625952396 Itpkb inositol-trisphosphate 3-kinase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); common myeloid progenitor cell proliferation (ortholog); ASSOCIATED WITH myeloproliferative neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 10 58661976 58757915 + 22301074;30032202 116911040 MODEL JAAIVD010000005;XM_032914787 XP_032770678 protein-coding 625952408 Ccno cyclin O INVOLVED IN cilium assembly (ortholog); mitotic cell cycle (ortholog); multi-ciliated epithelial cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); obstructive lung disease (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 3 183793064 183795204 - 30032202 116895653 MODEL JAAIVD010000012;XM_032896860 XP_032752751 cyclin-O protein-coding 625952413 LOC116885207 uncharacterized LOC116885207 16 16826173 16827107 + 116885207 MODEL JAAIVD010000004;XR_004385994 ncrna 625952417 LOC116894930 U1 spliceosomal RNA 2 96781093 96781257 + 116894930 MODEL JAAIVD010000001;XR_004387129 snrna 625952420 LOC116904783 small nucleolar RNA SNORD88 6 97943816 97943904 - 116904783 MODEL JAAIVD010000024;XR_004388447 snorna 625952423 Lct lactase ENCODES a protein that exhibits beta-glucosidase activity (ortholog); galactosylceramidase activity (ortholog); glucosylceramidase activity (ortholog); INVOLVED IN cellobiose catabolic process (ortholog); glycosylceramide catabolic process (ortholog); lactose catabolic process (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; lactose degradation pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); colitis (ortholog); congenital lactase deficiency (ortholog); FOUND IN brush border (ortholog); external side of apical plasma membrane (ortholog) 10 7387338 7430396 + 1909681;22301074;30032202 116911261 MODEL JAAIVD010000005;X56747;X56748;XM_032915165 CAA40069;CAA40070;XP_032771056 lactase-phlorizin hydrolase protein-coding 625952444 LOC116907212 heterogeneous nuclear ribonucleoprotein A1-like 8 7084177 7085238 - 116907212 MODEL JAAIVD010000027 pseudo 625952445 LOC116895257 olfactory receptor 2AG1-like 3 375462 376409 + 22301074 116895257 MODEL JAAIVD010000012;XM_032896576 XP_032752467 protein-coding 625952448 Pcgf2 polycomb group ring finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cellular response to hydrogen peroxide (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 56683348 56695028 + 30032202 116908806 MODEL JAAIVD010000002;XM_032912208;XM_032912209;XM_032912210;XM_032912211 XP_032768099;XP_032768100;XP_032768101;XP_032768102 polycomb group RING finger protein 2 protein-coding 625952472 Prrt2 proline rich transmembrane protein 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN negative regulation of short-term synaptic potentiation (ortholog); negative regulation of SNARE complex assembly (ortholog); neuromuscular process controlling posture (ortholog); ASSOCIATED WITH benign familial infantile seizures 2 (ortholog); Episodic Kinesigenic Dyskinesia (ortholog); episodic kinesigenic dyskinesia 1 (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 2 74872189 74876105 + 22301074;30032202 116891491 MODEL JAAIVD010000001;XM_032892595;XM_032892597 XP_032748486;XP_032748488 proline-rich transmembrane protein 2 protein-coding 625952485 LOC116894209 olfactory receptor 497-like 2 106462995 106463939 + 22301074;30032202 116894209 MODEL JAAIVD010000001;XM_032895921 XP_032751812 protein-coding 625952488 Myo9a myosin IXA INVOLVED IN cell junction assembly (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); postsynaptic specialization organization (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); congenital myasthenic syndrome (ortholog); Congenital Myasthenic Syndrome 24 (ortholog); FOUND IN axonal growth cone (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 8 53588709 53780292 + 22301074;30032202 116906589 MODEL JAAIVD010000027;XM_032909329;XM_032909330;XM_032909331;XM_032909332 XP_032765220;XP_032765221;XP_032765222;XP_032765223 unconventional myosin-IXa protein-coding 625952539 LOC116893539 protein LEG1 homolog 2 203524672 203539272 - 30032202 116893539 MODEL JAAIVD010000001;XM_032895259 XP_032751150 protein-coding 625952547 LOC116907894 60S ribosomal protein L32-like 8 77903578 77903996 + 116907894 MODEL JAAIVD010000027 pseudo 625952548 Ret ret proto-oncogene ENCODES a protein that exhibits calcium ion binding (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); embryonic epithelial tube formation (ortholog); ASSOCIATED WITH appendicitis (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); early endosome (ortholog) 6 28542797 28585158 + 22301074;30032202 116903351 MODEL JAAIVD010000024;XM_032905821 XP_032761712 proto-oncogene tyrosine-protein kinase receptor Ret protein-coding 625952572 LOC116905838 nascent polypeptide-associated complex subunit alpha, muscle-specific form-like 1 155520851 155528158 + 116905838 MODEL JAAIVD010000025;XM_032908813 XP_032764704 protein-coding 625952577 LOC116908861 atherin-like 9 63770685 63772630 + 116908861 MODEL JAAIVD010000002;XM_032912301;XM_032912302;XM_032912303 XP_032768192;XP_032768193;XP_032768194 uncharacterized protein LOC116908861 protein-coding 625952590 LOC116903004 vomeronasal type-1 receptor 93 6 146597120 146604392 + 22301074;30032202 116903004 MODEL JAAIVD010000024;XM_032905316 XP_032761207 protein-coding 625952597 Kras KRAS proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GMP binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cardiac muscle cell proliferation (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog) 6 2977677 3010435 - 22301074;30032202 116903078 MODEL JAAIVD010000024;XM_032905396;XM_032905397;XM_032905399 XP_032761287;XP_032761288;XP_032761290 GTPase KRas protein-coding 625952615 Gsto1 glutathione S-transferase omega 1 ENCODES a protein that exhibits glutathione dehydrogenase (ascorbate) activity (ortholog); glutathione transferase activity (ortholog); oxidoreductase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); L-ascorbic acid biosynthetic process (ortholog); L-ascorbic acid metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN axon (ortholog); basement membrane (ortholog); cell body (ortholog) 2 47362784 47372699 + 22301074;30032202;8042991;9786866 116891274 MODEL AB008807;JAAIVD010000001;XM_032892174 BAA34217;XP_032748065 glutathione S-transferase omega-1;glutathione-dependent dehydroascorbate reductase protein-coding 625952625 Arl5c ARF like GTPase 5C 9 56389636 56396872 + 22301074;30032202 116909512 MODEL JAAIVD010000002;XM_032913116 XP_032769007 ADP ribosylation factor like GTPase 5C;putative ADP-ribosylation factor-like protein 5C protein-coding 625952635 LOC116890570 small nucleolar RNA SNORA17 1 79744061 79744211 + 116890570 MODEL JAAIVD010000025 pseudo 625952636 Eif2d eukaryotic translation initiation factor 2D ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); ribosome disassembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 10 4631780 4656157 - 22301074;30032202 116911010 MODEL JAAIVD010000005;XM_032914739;XR_004389296;XR_004389297 XP_032770630 protein-coding 625952660 LOC116903758 S-adenosylmethionine synthase-like 6 15618907 15703404 - 116903758 MODEL JAAIVD010000024 pseudo 625952661 Cd1d CD1d molecule ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); endogenous lipid antigen binding (ortholog); exogenous lipid antigen binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation, endogenous lipid antigen via MHC class Ib (ortholog); antigen processing and presentation, exogenous lipid antigen via MHC class Ib (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 3 66569723 66573250 + 30032202 116895432 MODEL JAAIVD010000012;XM_032896714 XP_032752605 antigen-presenting glycoprotein CD1d protein-coding 625952671 LOC116900163 heterogeneous nuclear ribonucleoprotein A1-like 5 28104217 28105240 + 116900163 MODEL JAAIVD010000023 pseudo 625952672 LOC116910507 C-C motif chemokine 12-like 9 88368953 88370493 - 22301074;30032202 116910507 MODEL JAAIVD010000002;XM_032914405;XM_032914406 XP_032770296;XP_032770297 protein-coding 625952683 Tcf7l2 transcription factor 7 like 2 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; pancreatic cancer pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN beta-catenin-TCF7L2 complex (ortholog); catenin-TCF7L2 complex (ortholog); chromatin (ortholog) 2 60234041 60427146 - 30032202 116891338 MODEL JAAIVD010000001;XM_032892270;XM_032892271;XM_032892273;XM_032892274;XM_032892275;XM_032892276;XM_032892277;XM_032892278;XM_032892279;XM_032892280;XM_032892281;XM_032892282;XM_032892283;XM_032892284;XM_032892285;XM_032892286;XM_032892287;XM_032892289;XM_032892290;XM_032892291;XM_032892292;XM_032892293;XM_032892294;XM_032892295;XM_032892296;XM_032892297;XM_032892298;XM_032892300;XM_032892301;XM_032892302;XM_032892303;XM_032892304;XM_032892305;XM_032892306;XM_032892307;XM_032892308;XM_032892309;XM_032892311;XM_032892312;XM_032892313;XM_032892314;XM_032892315;XM_032892316;XM_032892317;XM_032892318;XM_032892319;XM_032892320;XM_032892322;XM_032892323;XM_032892324 XP_032748161;XP_032748162;XP_032748164;XP_032748165;XP_032748166;XP_032748167;XP_032748168;XP_032748169;XP_032748170;XP_032748171;XP_032748172;XP_032748173;XP_032748174;XP_032748175;XP_032748176;XP_032748177;XP_032748178;XP_032748180;XP_032748181;XP_032748182;XP_032748183;XP_032748184;XP_032748185;XP_032748186;XP_032748187;XP_032748188;XP_032748189;XP_032748191;XP_032748192;XP_032748193;XP_032748194;XP_032748195;XP_032748196;XP_032748197;XP_032748198;XP_032748199;XP_032748200;XP_032748202;XP_032748203;XP_032748204;XP_032748205;XP_032748206;XP_032748207;XP_032748208;XP_032748209;XP_032748210;XP_032748211;XP_032748213;XP_032748214;XP_032748215 transcription factor 7-like 2 protein-coding 625952780 Tmem86b transmembrane protein 86B ENCODES a protein that exhibits alkenylglycerophosphocholine hydrolase activity (ortholog); D-lysine 5,6-aminomutase activity (ortholog); identical protein binding (ortholog); INVOLVED IN ether lipid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 2 177206445 177209638 - 22301074;30032202 116892660 MODEL JAAIVD010000001;XM_032894482 XP_032750373 lysoplasmalogenase protein-coding 625952786 Runx2 RUNX family transcription factor 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone mineralization (ortholog); bone regeneration (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Aortic Calcification (ortholog); Bone Fractures (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 4 85131698 85258574 + 22301074;30032202 116899139 MODEL JAAIVD010000003;XM_032900676;XM_032900677 XP_032756567;XP_032756568 runt-related transcription factor 2 protein-coding 625952798 LOC116900278 olfactory receptor 1044 5 63450813 63451757 - 22301074;30032202 116900278 MODEL JAAIVD010000023;XM_032902031 XP_032757922 protein-coding 625952801 Ltb4r2 leukotriene B4 receptor 2 ENCODES a protein that exhibits leukotriene B4 receptor activity (ortholog); INVOLVED IN keratinocyte migration (ortholog); signal transduction (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); FOUND IN membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 12 69241331 69242407 - 22301074;30032202 116914091 MODEL JAAIVD010000007;XM_032918404 XP_032774295 protein-coding 625952804 LOC116903008 40S ribosomal protein S9-like 6 147156129 147156687 + 116903008 MODEL JAAIVD010000024 pseudo 625952805 LOC116884371 60S ribosomal protein L29-like 15 44362334 44362746 + 116884371 MODEL JAAIVD010000010 pseudo 625952806 Dock11 dedicator of cytokinesis 11 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); marginal zone B cell differentiation (ortholog); positive regulation of filopodium assembly (ortholog); ASSOCIATED WITH AUTOINFLAMMATORY DISEASE, MULTISYSTEM, WITH IMMUNE DYSREGULATION, X-LINKED (ortholog) X 102079982 102266434 + 30032202 116888459 MODEL JAAIVD010000014;XM_032889739 XP_032745630 dedicator of cytokinesis protein 11 protein-coding 625952863 LOC116899864 small nucleolar RNA SNORA17 4 133436739 133436875 - 116899864 MODEL JAAIVD010000003;XR_004387858 snorna 625952866 Klk14 kallikrein related peptidase 14 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN epidermis morphogenesis (ortholog); fertilization (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN extracellular space (ortholog) 2 155705138 155709763 - 22301074;30032202 116894361 MODEL JAAIVD010000001;XM_032896062 XP_032751953 kallikrein-14 protein-coding 625952873 LOC116914054 farnesyl pyrophosphate synthase-like 12 77670261 77671480 - 116914054 MODEL JAAIVD010000007 pseudo 625952874 LOC116914368 protein PBDC1-like 13 77067137 77067726 - 116914368 MODEL JAAIVD010000008 pseudo 625952875 LOC116908132 uncharacterized LOC116908132 8 39155475 39156038 + 116908132 MODEL JAAIVD010000027;XR_004388876 ncrna 625952879 LOC116908917 olfactory receptor 1468-like 9 42144003 42144959 - 22301074;30032202 116908917 MODEL JAAIVD010000002;XM_032912374 XP_032768265 protein-coding 625952883 LOC116904779 small Cajal body-specific RNA 11 6 22776914 22777049 - 116904779 MODEL JAAIVD010000024;XR_004388443 ncrna 625952886 Zmpste24 zinc metallopeptidase STE24 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); bone mineralization (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); ASSOCIATED WITH Acro-Osteolysis (ortholog); Craniofacial Abnormalities (ortholog); Craniomandibular Disorders (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog); protein-containing complex (ortholog) 1 35920320 35955055 + 22301074;30032202 116897213 MODEL JAAIVD010000025;XM_032898929;XM_032898937 XP_032754820;XP_032754828 CAAX prenyl protease 1 homolog protein-coding 625952903 Dpm1 dolichyl-phosphate mannosyltransferase subunit 1, catalytic ENCODES a protein that exhibits dolichyl-phosphate beta-D-mannosyltransferase activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ie (ortholog); genetic disease (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 149779649 149797704 + 22301074;30032202 116902302 MODEL JAAIVD010000023;XM_032904746 XP_032760637 dolichol-phosphate mannosyltransferase subunit 1 protein-coding 625952916 LOC116890221 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 267490787 267491225 - 116890221 MODEL JAAIVD010000025 pseudo 625952917 LOC116913600 ADP/ATP translocase 2-like 12 51749487 51750542 + 116913600 MODEL JAAIVD010000007 pseudo 625952918 Pacs2 phosphofurin acidic cluster sorting protein 2 INVOLVED IN autophagosome assembly (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); mitochondrion-endoplasmic reticulum membrane tethering (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 66 (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 7 130620825 130679831 + 30032202 116905527 MODEL JAAIVD010000026;XM_032908553;XM_032908554;XM_032908556 XP_032764444;XP_032764445;XP_032764447 protein-coding 625952954 Creg1 cellular repressor of E1A stimulated genes 1 INVOLVED IN autophagy (ortholog); endocytosis (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); diastolic heart failure (ortholog); Prostatic Neoplasms (ortholog); FOUND IN endosome (ortholog); extracellular space (ortholog); lysosome (ortholog) 10 44868093 44879271 + 116911470 MODEL JAAIVD010000005;XM_032915451;XM_032915453 XP_032771342;XP_032771344 protein CREG1 protein-coding 625952966 LOC116895287 dnaJ homolog subfamily B member 3-like 3 14258082 14263940 + 30032202 116895287 MODEL JAAIVD010000012;XM_032896598 XP_032752489 protein-coding 625952972 Parp6 poly(ADP-ribose) polymerase family member 6 ENCODES a protein that exhibits NAD+-protein-aspartate ADP-ribosyltransferase activity (ortholog); NAD+-protein-cysteine ADP-ribosyltransferase activity (ortholog); INVOLVED IN positive regulation of dendrite morphogenesis (ortholog); protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) 8 53457033 53489104 + 22301074;30032202 116906649 MODEL JAAIVD010000027;XM_032909427;XM_032909428;XM_032909429;XM_032909430;XM_032909431;XM_032909432;XR_004388758;XR_004388759;XR_004388760;XR_004388761 XP_032765318;XP_032765319;XP_032765320;XP_032765321;XP_032765322;XP_032765323 protein mono-ADP-ribosyltransferase PARP6 protein-coding 625953019 LOC116910077 keratin-associated protein 4-3-like 9 54587230 54587802 - 22301074;30032202 116910077 MODEL JAAIVD010000002;XM_032913893 XP_032769784 protein-coding 625953022 Marchf2 membrane associated ring-CH-type finger 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); antiviral innate immune response (ortholog); positive regulation of lysosomal protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 158691245 158716147 + 22301074;30032202 116907113 MODEL JAAIVD010000025;XM_032910091;XM_032910097;XM_032910104 XP_032765982;XP_032765988;XP_032765995 E3 ubiquitin-protein ligase MARCH2 protein-coding 625953036 LOC116895780 chymosin-like 3 51020639 51041061 + 22301074;30032202 116895780 MODEL JAAIVD010000012;XM_032896929 XP_032752820 protein-coding 625953050 LOC116895741 39S ribosomal protein L54, mitochondrial-like 3 34336123 34336583 + 116895741 MODEL JAAIVD010000012 pseudo 625953051 Kbtbd11 kelch repeat and BTB domain containing 11 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 13 68794950 68799405 - 22301074 116914603 MODEL JAAIVD010000008;XM_032918967 XP_032774858 kelch repeat and BTB domain-containing protein 11 protein-coding 625953056 Cgrrf1 cell growth regulator with ring finger domain 1 INVOLVED IN negative regulation of cell growth (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 12 76204128 76226233 - 30032202 116913612 MODEL JAAIVD010000007;XM_032917863 XP_032773754 cell growth regulator with RING finger domain protein 1 protein-coding 625953066 LOC116891042 keratin-associated protein 5-4-like 2 7394631 7396254 + 116891042 MODEL JAAIVD010000001 pseudo 625953067 LOC116911798 olfactory receptor 10X1-like 10 52985399 52986331 + 22301074 116911798 MODEL JAAIVD010000005;XM_032915800 XP_032771691 protein-coding 625953070 Ankrd2 ankyrin repeat domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); protein kinase B binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of myoblast differentiation (ortholog); negative regulation of myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); I band (ortholog) 2 41150079 41159588 + 30032202 116893797 MODEL JAAIVD010000001;XM_032895501;XM_032895502 XP_032751392;XP_032751393 ankyrin repeat domain-containing protein 2 protein-coding 625953087 LOC116911089 olfactory receptor 6C6-like 1 161866257 161867818 + 116911089 MODEL JAAIVD010000025 pseudo 625953088 Noct nocturnin ENCODES a protein that exhibits mRNA binding (ortholog); NADP phosphatase activity (ortholog); NADPH phosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 3 103203157 103223709 - 22301074 116896894 MODEL JAAIVD010000012;XM_032898440 XP_032754331 protein-coding 625953095 Cep112 centrosomal protein 112 INVOLVED IN receptor localization to synapse (ortholog); ASSOCIATED WITH spermatogenic failure 44 (ortholog); FOUND IN centrosome (ortholog); inhibitory synapse (ortholog); plasma membrane (ortholog) 9 70281846 70718653 - 116910355 MODEL JAAIVD010000002;XM_032914210 XP_032770101 centrosomal protein of 112 kDa protein-coding 625953123 Znf764 zinc finger protein 764 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN nucleus (ortholog) 2 74497654 74500341 + 30032202 116891472 MODEL JAAIVD010000001;XM_032892571 XP_032748462 protein-coding 625953130 LOC116890581 small nucleolar RNA SNORA17 1 89221132 89221267 - 116890581 MODEL JAAIVD010000025;XR_004386743 snorna 625953133 Fam167a family with sequence similarity 167 member A 12 60929312 60956195 - 116913773 MODEL JAAIVD010000007;XM_032918078;XM_032918079 XP_032773969;XP_032773970 protein FAM167A protein-coding 625953144 LOC116894913 U7 small nuclear RNA 2 143502534 143502593 - 116894913 MODEL JAAIVD010000001;XR_004387115 snrna 625953147 LOC116900261 olfactory receptor 5M10-like 5 63188171 63189118 + 22301074;30032202 116900261 MODEL JAAIVD010000023;XM_032902013 XP_032757904 protein-coding 625953150 Nptx1 neuronal pentraxin 1 INVOLVED IN axonogenesis involved in innervation (ortholog); cellular response to glucose stimulus (ortholog); cellular response to potassium ion (ortholog); ASSOCIATED WITH genetic disease (ortholog); Spinocerebellar Ataxia 50 (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic cleft (ortholog) 9 64469033 64478286 + 30032202 116909392 MODEL JAAIVD010000002;XM_032912954 XP_032768845 neuronal pentraxin-1 protein-coding 625953159 Plin3 perilipin 3 INVOLVED IN cellular response to glucose starvation (ortholog); lipid droplet disassembly (ortholog); lipid storage (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) 4 87670332 87681479 - 30032202 116899179 MODEL JAAIVD010000003;XM_032900750 XP_032756641 perilipin-3 protein-coding 625953171 Khdc3l KH domain containing 3 like, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); establishment of organelle localization (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hydatidiform Mole (ortholog); Hydatidiform Mole, Recurrent, 2 (ortholog); FOUND IN apical cortex (ortholog); cell cortex (ortholog); centrosome (ortholog) 8 67442598 67444518 + 22301074;30032202 116907823 MODEL JAAIVD010000027;XM_032911003 XP_032766894 KHDC3-like protein protein-coding 625953178 LOC116910860 FANCD2 opposite strand protein-like 10 28644720 28645262 + 116910860 MODEL JAAIVD010000005;XM_032914621 XP_032770512 protein-coding 625953181 Brinp2 BMP/retinoic acid inducible neural specific 2 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); locomotion (ortholog); ASSOCIATED WITH oral squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 10 37575518 37681593 - 22301074;30032202 116911734 MODEL JAAIVD010000005;XM_032915713;XM_032915714 XP_032771604;XP_032771605 BMP/retinoic acid-inducible neural-specific protein 2 protein-coding 625953196 Psme2 proteasome activator subunit 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog) 12 69416256 69420080 + 22301074;30032202 116913314 MODEL JAAIVD010000007;XM_032917457 XP_032773348 proteasome activator complex subunit 2 protein-coding 625953211 LOC116906048 protein HEXIM2-like 7 46282118 46290087 - 116906048 MODEL JAAIVD010000026 pseudo 625953212 LOC116906424 small nucleolar RNA SNORA58 7 101534226 101534360 - 116906424 MODEL JAAIVD010000026;XR_004388686 snorna 625953215 LOC116897433 U6 spliceosomal RNA 3 26378172 26378278 + 116897433 MODEL JAAIVD010000012;XR_004387474 snrna 625953218 Chchd3 coiled-coil-helix-coiled-coil-helix domain containing 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN cristae formation (ortholog); inner mitochondrial membrane organization (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 106611041 106862836 + 22301074;30032202 116903988 MODEL JAAIVD010000024;XM_032906793;XM_032906795 XP_032762684;XP_032762686 MICOS complex subunit MIC19 protein-coding 625953232 Kcnk12 potassium two pore domain channel subfamily K member 12 ENCODES a protein that exhibits identical protein binding (ortholog); potassium channel activity (ortholog); protein heterodimerization activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 7 5186691 5234340 + 22301074;30032202 116905744 MODEL JAAIVD010000026;XM_032908712 XP_032764603 potassium channel subfamily K member 12 protein-coding 625953238 LOC116892412 zinc finger protein 780A-like 2 168089739 168110289 - 30032202 116892412 MODEL JAAIVD010000001;XM_032894091 XP_032749982 protein-coding 625953245 Cdc25c cell division cycle 25C ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); WW domain binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) 15 9606138 9625959 + 22301074;30032202 116884538 MODEL JAAIVD010000010;XM_032885675 XP_032741566 M-phase inducer phosphatase 3 protein-coding 625953263 LOC116894020 olfactory receptor 52A5-like 2 101940704 101941654 - 22301074 116894020 MODEL JAAIVD010000001;XM_032895736 XP_032751627 protein-coding 625953266 Tent5a terminal nucleotidyltransferase 5A ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); positive regulation of osteoblast differentiation (ortholog); regulation of ossification (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); lung non-small cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog) 8 79385102 79391901 - 22301074;30032202 116906996 MODEL JAAIVD010000027;XM_032909923;XM_032909924 XP_032765814;XP_032765815 protein-coding 625953276 Hmgcs2 3-hydroxy-3-methylglutaryl-CoA synthase 2 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); adipose tissue development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 59008523 59032323 - 22301074;30032202 116896481 MODEL JAAIVD010000012;XM_032897646 XP_032753537 hydroxymethylglutaryl-CoA synthase, mitochondrial protein-coding 625953289 Sphk1 sphingosine kinase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Fibrosis (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); cilium (ortholog); clathrin-coated pit (ortholog) 9 67541543 67547255 - 30032202 116910150 MODEL JAAIVD010000002;XM_032913998;XM_032913999;XM_032914000;XM_032914002;XM_032914003;XM_032914004 XP_032769889;XP_032769890;XP_032769891;XP_032769893;XP_032769894;XP_032769895 protein-coding 625953314 LOC116902572 5S ribosomal RNA 5 42855049 42855167 - 116902572 MODEL JAAIVD010000023 pseudo 625953315 LOC116904332 aspartate aminotransferase, mitochondrial-like 6 64978400 64978972 - 22301074;30032202 116904332 MODEL JAAIVD010000024;XM_032907238 XP_032763129 protein-coding 625953319 LOC116915068 protein SCO2 homolog, mitochondrial ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN copper ion homeostasis (ortholog); eye development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cytochrome-c oxidase deficiency disease (ortholog); Human Influenza (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); myofibril (ortholog) 1 258670841 258672849 - 22301074;30032202 116915068 MODEL JAAIVD010000025;XM_032919487;XM_032919495;XM_032919504;XM_032919510 XP_032775378;XP_032775386;XP_032775395;XP_032775401 protein-coding 625953334 Nlrp1 NLR family pyrin domain containing 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); cysteine-type endopeptidase activator activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to UV-B (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Autoinflammation with Arthritis and Dyskeratosis (ortholog); genetic disease (ortholog); Multiple Self-healing Palmoplantar Carcinoma (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 9 44189621 44233675 + 22301074;30032202 116910287 MODEL JAAIVD010000002;XM_032914159 XP_032770050 NACHT, LRR and PYD domains-containing protein 1 protein-coding 625953353 Gtpbp8 GTP binding protein 8 (putative) FOUND IN mitochondrion (ortholog) 4 29604645 29614390 - 22301074;30032202 116898868 MODEL JAAIVD010000003;XM_032900236 XP_032756127 GTP-binding protein 8 protein-coding 625953363 LOC116892964 nucleophosmin-like 2 213448531 213449372 + 116892964 MODEL JAAIVD010000001 pseudo 625953364 LOC116894872 U6 spliceosomal RNA 2 4173898 4174001 - 116894872 MODEL JAAIVD010000001;XR_004387084 snrna 625953367 Polr3gl RNA polymerase III subunit GL ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Dwarfism (ortholog); hyperostosis (ortholog); SHORT STATURE, OLIGODONTIA, DYSMORPHIC FACIES, AND MOTOR DELAY (ortholog); FOUND IN nucleus (ortholog); RNA polymerase III complex (ortholog) 3 60712181 60727750 + 22301074;30032202 116896508 MODEL JAAIVD010000012;XM_032897689;XM_032897690 XP_032753580;XP_032753581 DNA-directed RNA polymerase III subunit RPC7-like;RNA polymerase III subunit G like protein-coding 625953382 Pspn persephin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); FOUND IN extracellular space (ortholog) 4 88380512 88381486 - 22301074;30032202 116899205 MODEL JAAIVD010000003;XM_032900794 XP_032756685 protein-coding 625953388 LOC116883967 spermatogenesis-associated protein 31 14 74697003 74702858 - 116883967 MODEL JAAIVD010000009;XM_032885205;XM_032885207 XP_032741096;XP_032741098 protein-coding 625953400 Anapc11 anaphase promoting complex subunit 11 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); positive regulation of mitotic metaphase/anaphase transition (ortholog); protein branched polyubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 63416798 63425236 - 22301074;30032202 116908805 MODEL JAAIVD010000002;XM_032912206;XM_032912207 XP_032768097;XP_032768098 anaphase-promoting complex subunit 11 protein-coding 625953410 Rad51ap1 RAD51 associated protein 1 ENCODES a protein that exhibits D-loop DNA binding (ortholog); DNA binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); DNA recombination (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); nucleus (ortholog) 6 20966639 20979701 + 30032202 116903238 MODEL JAAIVD010000024;XM_032905616 XP_032761507 RAD51-associated protein 1 protein-coding 625953423 LOC116910639 U6 spliceosomal RNA 9 55569794 55569895 + 116910639 MODEL JAAIVD010000002;XR_004389177 snrna 625953426 LOC116902512 small nucleolar RNA SNORA71 5 137728893 137729025 + 116902512 MODEL JAAIVD010000023;XR_004388121 snorna 625953429 Mrgprd MAS related GPR family member D ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN plasma membrane (ortholog) 2 4415075 4420408 - 22301074;30032202 116893603 MODEL JAAIVD010000001;XM_032895311 XP_032751202 mas-related G-protein coupled receptor member D protein-coding 625953434 Pex10 peroxisomal biogenesis factor 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); peroxisome organization (ortholog); pexophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 1 5647106 5653305 - 30032202 116892044 MODEL JAAIVD010000025;XM_032893512 XP_032749403 peroxisome biogenesis factor 10 protein-coding 625953444 LOC116897456 U6 spliceosomal RNA 3 11638960 11639063 + 116897456 MODEL JAAIVD010000012;XR_004387487 snrna 625953447 Eral1 Era like 12S mitochondrial rRNA chaperone 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN ribosomal small subunit assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hearing Loss (ortholog); Perrault syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 92364705 92371909 + 22301074;30032202 116909830 MODEL JAAIVD010000002;XM_032913547;XM_032913548 XP_032769438;XP_032769439 GTPase Era, mitochondrial protein-coding 625953462 LOC116891476 U1 small nuclear ribonucleoprotein C-like 1 52829984 52830507 + 22301074;30032202 116891476 MODEL JAAIVD010000025;XM_032892619 XP_032748510 protein-coding 625953466 LOC116889630 60S ribosomal protein L18-like Y 1956417 1956966 + 116889630 MODEL JAAIVD010000015 pseudo 625953467 LOC116910115 olfactory receptor 1D2-like 9 33669994 33670935 + 22301074;30032202 116910115 MODEL JAAIVD010000002;XM_032913945 XP_032769836 protein-coding 625953470 LOC116888241 high mobility group protein B4-like X 90303671 90304678 + 116888241 MODEL JAAIVD010000014 pseudo 625953471 LOC116907317 olfactory receptor 150-like 8 82564766 82565710 + 22301074;30032202 116907317 MODEL JAAIVD010000027;XM_032910262 XP_032766153 protein-coding 625953475 Fancf FA complementation group F ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); ovarian follicle development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH adenocarcinoma in situ (ortholog); breast cancer (ortholog); disease of cellular proliferation (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) 2 148786293 148787978 + 22301074;30032202 116892064 MODEL JAAIVD010000001;XM_032893535 XP_032749426 Fanconi anemia group F protein protein-coding 625953480 Ago2 argonaute RISC catalytic component 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); double-stranded RNA binding (ortholog); endoribonuclease activity, cleaving miRNA-paired mRNA (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); gene expression (ortholog); miRNA metabolic process (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); Cocaine-Related Disorders (ortholog); genetic disease (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 245887801 245924414 - 22301074 116912384 MODEL JAAIVD010000025;XM_032916445 XP_032772336 protein argonaute-2 protein-coding 625953502 Acod1 aconitate decarboxylase 1 ENCODES a protein that exhibits aconitate decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cocaine (ortholog); cellular response to interferon-beta (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH esophageal carcinoma (ortholog); head and neck squamous cell carcinoma (ortholog); Invasive Breast Carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 12 21666272 21674861 - 22301074;30032202 116913978 MODEL JAAIVD010000007;XM_032918250 XP_032774141 cis-aconitate decarboxylase protein-coding 625953511 Spaca3 sperm acrosome associated 3 ENCODES a protein that exhibits lysozyme activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal matrix (ortholog); acrosomal membrane (ortholog); acrosomal vesicle (ortholog) 9 89571010 89574043 - 22301074;30032202 116910408 MODEL JAAIVD010000002;XM_032914250 XP_032770141 sperm acrosome membrane-associated protein 3 protein-coding 625953518 LOC116894647 vomeronasal type-2 receptor 26-like 2 199454631 199473125 + 116894647 MODEL JAAIVD010000001 pseudo 625953519 LOC116885826 ubiquitin-conjugating enzyme E2 C-like 16 11232929 11238379 + 116885826 MODEL JAAIVD010000004 pseudo 625953520 Ncf2 neutrophil cytosolic factor 2 ENCODES a protein that exhibits small GTPase binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); positive regulation of blood pressure (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Alzheimer's disease (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 32270049 32298799 + 22301074;30032202 116911746 MODEL JAAIVD010000005;XM_032915738 XP_032771629 neutrophil cytosol factor 2 protein-coding 625953539 Rrbp1 ribosome binding protein 1 INVOLVED IN signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 123600841 123662783 - 22301074;30032202 116902039 MODEL JAAIVD010000023;XM_032904322 XP_032760213 ribosome-binding protein 1 protein-coding 625953567 LOC116886716 ATP-dependent RNA helicase DDX19A 17 30673738 30694176 - 22301074;30032202 116886716 MODEL JAAIVD010000011;XM_032888226;XM_032888227 XP_032744117;XP_032744118 protein-coding 625953587 LOC116889012 rab GDP dissociation inhibitor beta-like X 15970392 15971902 + 116889012 MODEL JAAIVD010000014 pseudo 625953588 LOC116895902 40S ribosomal protein S6-like 3 120464524 120465097 + 116895902 MODEL JAAIVD010000012 pseudo 625953589 Zfpm1 zinc finger protein, FOG family member 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial septum morphogenesis (ortholog); atrioventricular valve morphogenesis (ortholog); cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 17 41954965 41968891 + 30032202 116886171 MODEL JAAIVD010000011;XM_032887543 XP_032743434 zinc finger protein ZFPM1 protein-coding 625953600 Urb1 URB1 ribosome biogenesis factor FOUND IN fibrillar center (ortholog); nucleolus (ortholog) 4 53776092 53836502 + 30032202 116899007 MODEL JAAIVD010000003;XM_032900456 XP_032756347 URB1 ribosome biogenesis homolog;nucleolar pre-ribosomal-associated protein 1 protein-coding 625953643 LOC116883975 ankyrin repeat domain-containing protein 26-like 14 26295265 26494510 + 22301074 116883975 MODEL JAAIVD010000009;XM_032885209 XP_032741100 protein-coding 625953682 Impact impact RWD domain protein ENCODES a protein that exhibits actin binding (ortholog); protein sequestering activity (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); intracellular signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 15 30709818 30738520 - 22301074;30032202 116884850 MODEL JAAIVD010000010;XM_032886095 XP_032741986 protein IMPACT protein-coding 625953699 Magee1 MAGE family member E1 ASSOCIATED WITH bile duct disease (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN dendrite (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) X 64943273 64946802 + 30032202 116889292 MODEL JAAIVD010000014;XM_032890423 XP_032746314 melanoma-associated antigen E1 protein-coding 625953704 LOC116896699 uncharacterized LOC116896699 3 65334182 65343165 - 116896699 MODEL JAAIVD010000012;XR_004387357 ncrna 625953710 Scaf8 SR-related CTD associated factor 8 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled (ortholog); positive regulation of DNA-templated transcription, elongation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 195511355 195640186 - 22301074;30032202 116892863 MODEL JAAIVD010000001;XM_032894760;XM_032894762;XM_032894763;XM_032894764;XM_032894765 XP_032750651;XP_032750653;XP_032750654;XP_032750655;XP_032750656 SR-related and CTD-associated factor 8 protein-coding 625953746 LOC116893097 28S ribosomal protein L42, mitochondrial-like 2 61530094 61530589 - 116893097 MODEL JAAIVD010000001 pseudo 625953747 LOC116897538 small nucleolar RNA SNORA17 3 220284107 220284238 + 116897538 MODEL JAAIVD010000012;XR_004387552 snorna 625953750 Tubgcp4 tubulin gamma complex component 4 ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); microcephaly and chorioretinopathy 1 (ortholog); FOUND IN centrosome (ortholog); recycling endosome (ortholog) 5 99325156 99351966 + 22301074;30032202 116901857 MODEL JAAIVD010000023;XM_032904052;XM_032904054 XP_032759943;XP_032759945 gamma-tubulin complex component 4;tubulin gamma complex associated protein 4 protein-coding 625953776 LOC116894475 cytochrome P450 2F2 2 168806350 168819957 - 22301074;30032202 116894475 MODEL JAAIVD010000001;XM_032896186 XP_032752077 protein-coding 625953790 LOC116897422 U6 spliceosomal RNA 3 118224582 118224686 - 116897422 MODEL JAAIVD010000012;XR_004387464 snrna 625953793 Alms1 ALMS1 centrosome and basal body associated protein ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cholesterol homeostasis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Alstrom syndrome (ortholog); Bardet-Biedl syndrome (ortholog); cone-rod dystrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 6 60507141 60608606 - 30032202 116903568 MODEL JAAIVD010000024;XM_032906187 XP_032762078 Alstrom syndrome protein 1 protein-coding 625953820 LOC116907720 uncharacterized LOC116907720 8 56977000 56978256 + 116907720 MODEL JAAIVD010000027;XR_004388839 ncrna 625953824 Znf551 zinc finger protein 551 8 3369456 3379842 + 30032202 116907049 MODEL JAAIVD010000027;XM_032910004 XP_032765895 protein-coding 625953832 Fzd4 frizzled class receptor 4 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Arachnodactyly (ortholog); cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cilium (ortholog) 2 111737629 111742657 - 22301074;30032202 116891862 MODEL JAAIVD010000001;XM_032893262 XP_032749153 frizzled-4 protein-coding 625953838 Il27 interleukin 27 ENCODES a protein that exhibits interleukin-27 receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of defense response to virus by host (ortholog); positive regulation of type II interferon production (ortholog); regulation of T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Arenaviridae infectious disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 2 75329391 75335962 + 30032202 116893124 MODEL JAAIVD010000001;XM_032895059 XP_032750950 interleukin-27 subunit alpha protein-coding 625953845 LOC116898925 acetyl-CoA acetyltransferase, cytosolic-like 4 43775610 43777500 - 116898925 MODEL JAAIVD010000003 pseudo 625953846 LOC116910400 olfactory receptor 3A1-like 9 93054554 93055513 - 22301074;30032202 116910400 MODEL JAAIVD010000002;XM_032914240 XP_032770131 protein-coding 625953850 LOC116906149 ornithine decarboxylase-like 7 94569631 94570832 - 116906149 MODEL JAAIVD010000026 pseudo 625953851 Gnaq G protein subunit alpha q ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); enzyme regulator activity (ortholog); G protein activity (ortholog); INVOLVED IN action potential (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to acidic pH (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; angiotensin II signaling pathway via AT1 receptor; eicosanoid signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); blood coagulation disease (ortholog); Cardiomegaly (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); dendrite (ortholog) 2 16066871 16308154 + 22301074;30032202 116891004 MODEL JAAIVD010000001;XM_032891682 XP_032747573 guanine nucleotide-binding protein G(q) subunit alpha protein-coding 625953862 LOC116888536 uncharacterized LOC116888536 1 94227734 94234423 + 116888536 MODEL JAAIVD010000025;XR_004386319;XR_004386320 ncrna 625953869 Hcar1 hydroxycarboxylic acid receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of lipid catabolic process (ortholog); FOUND IN membrane (ortholog) 16 29976665 29977928 + 22301074 116885605 MODEL JAAIVD010000004;XM_032886907 XP_032742798 protein-coding 625953873 LOC116893687 glycine N-acyltransferase-like protein Keg1 2 12747252 12758940 + 22301074;30032202 116893687 MODEL JAAIVD010000001;XM_032895404 XP_032751295 protein-coding 625953880 LOC116889033 uncharacterized LOC116889033 X 19024677 19025304 + 116889033 MODEL JAAIVD010000014 pseudo 625953881 Tmem190 transmembrane protein 190 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN inner acrosomal membrane (ortholog) 2 177359212 177360749 + 30032202 116892669 MODEL JAAIVD010000001;XM_032894496 XP_032750387 protein-coding 625953889 LOC116895988 ubiquitin-associated protein 2-like 3 165256246 165259414 - 116895988 MODEL JAAIVD010000012 pseudo 625953890 LOC116901732 protein SEC13 homolog 5 88893494 88894447 - 116901732 MODEL JAAIVD010000023 pseudo 625953891 Mier1 MIER1 transcriptional regulator ENCODES a protein that exhibits histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 1 51415147 51467485 - 30032202 116899512 MODEL JAAIVD010000025;XM_032901371;XM_032901379;XM_032901388;XM_032901397;XM_032901405;XM_032901414;XM_032901423;XM_032901433;XM_032901442;XM_032901448 XP_032757262;XP_032757270;XP_032757279;XP_032757288;XP_032757296;XP_032757305;XP_032757314;XP_032757324;XP_032757333;XP_032757339 mesoderm induction early response protein 1 protein-coding 625953934 C9H16orf96 chromosome 9 C16orf96 homolog 9 17036136 17080032 - 116910088 MODEL JAAIVD010000002;XM_032913910 XP_032769801 uncharacterized protein C16orf96 homolog protein-coding 625953953 Izumo3 IZUMO family member 3 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); FOUND IN inner acrosomal membrane (ortholog) 1 61135140 61137393 + 116887838 MODEL JAAIVD010000025;XM_032889350 XP_032745241 izumo sperm-egg fusion protein 3 protein-coding 625953962 Ccdc163 CCDC163 homolog 1 40346295 40351543 + 116898467 MODEL JAAIVD010000025;XM_032899722 XP_032755613 coiled-coil domain containing 163;transmembrane protein CCDC163 protein-coding 625953976 Ferd3l Fer3 like bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell development (ortholog); floor plate development (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 7 47272100 47272983 + 22301074;30032202 116905011 MODEL JAAIVD010000026;XM_032907698 XP_032763589 fer3-like protein protein-coding 625953981 LOC116915197 small nucleolar RNA SNORA48 13 62296174 62296317 - 116915197 MODEL JAAIVD010000008;XR_004389851 snorna 625953984 LOC116890240 olfactory receptor 8S1-like 1 271267477 271268412 + 22301074 116890240 MODEL JAAIVD010000025;XM_032890968 XP_032746859 protein-coding 625953987 Dyrk4 dual specificity tyrosine phosphorylation regulated kinase 4 6 20981521 21022293 + 22301074;30032202 116904583 MODEL JAAIVD010000024;XM_032907378 XP_032763269 dual specificity tyrosine-phosphorylation-regulated kinase 4 protein-coding 625954005 LOC116884407 40S ribosomal protein S7-like 15 67150640 67151510 + 116884407 MODEL JAAIVD010000010 pseudo 625954006 Gcsam germinal center associated signaling and motility ENCODES a protein that exhibits actin binding (ortholog); myosin II binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of lymphocyte migration (ortholog); regulation of B cell receptor signaling pathway (ortholog) 4 30340757 30349309 + 22301074;30032202 116897889 MODEL JAAIVD010000003;XM_032899294;XM_032899295 XP_032755185;XP_032755186 germinal center-associated signaling and motility protein protein-coding 625954019 LOC116895325 mitochondrial import inner membrane translocase subunit Tim23-like 3 33049460 33050066 + 116895325 MODEL JAAIVD010000012 pseudo 625954020 LOC116897518 U1 spliceosomal RNA 3 63055444 63055596 + 116897518 MODEL JAAIVD010000012 pseudo 625954021 LOC116895027 small nucleolar RNA SNORA17 2 112933190 112933321 - 116895027 MODEL JAAIVD010000001;XR_004387213 snorna 625954024 LOC116903122 receptor-interacting serine/threonine-protein kinase 2 1 125980797 125994654 - 22301074;30032202 116903122 MODEL JAAIVD010000025;XM_032905475 XP_032761366 protein-coding 625954032 LOC116897419 U6 spliceosomal RNA 3 144412597 144412703 - 116897419 MODEL JAAIVD010000012;XR_004387461 snrna 625954035 LOC116910696 small nucleolar RNA SNORA48 9 49280757 49280904 - 116910696 MODEL JAAIVD010000002;XR_004389224 snorna 625954038 Rab25 RAB25, member RAS oncogene family ENCODES a protein that exhibits myosin V binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); pseudopodium (ortholog) 3 65015458 65021697 + 22301074;30032202 116896683 MODEL JAAIVD010000012;XM_032898067 XP_032753958 ras-related protein Rab-25 protein-coding 625954047 Hlx H2.0 like homeobox ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); embryonic digestive tract morphogenesis (ortholog); enteric nervous system development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway 10 62895813 62901408 - 22301074;30032202 116911247 MODEL JAAIVD010000005;XM_032915148 XP_032771039 H2.0-like homeobox protein protein-coding 625954055 LOC116896197 guanylate-binding protein 4-like 3 18265318 18283054 - 22301074;30032202 116896197 MODEL JAAIVD010000012;XM_032897244 XP_032753135 protein-coding 625954069 Myl3 myosin light chain 3 ENCODES a protein that exhibits actin monomer binding (ortholog); cytoskeletal motor activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); regulation of striated muscle contraction (ortholog); regulation of the force of heart contraction (ortholog); PARTICIPATES IN prostaglandin I2 signaling pathway; ASSOCIATED WITH cardiac amyloidosis (ortholog); cardiomyopathy (ortholog); Familial Amyloid Polyneuropathies (ortholog); FOUND IN A band (ortholog); I band (ortholog); myosin complex (ortholog) 8 101344808 101350804 + 22301074;30032202 116907683 MODEL JAAIVD010000027;XM_032910789 XP_032766680 protein-coding 625954080 Cd200r1l CD200 receptor 1 like ENCODES a protein that exhibits signaling receptor activity (ortholog); FOUND IN external side of plasma membrane (ortholog) 4 29715214 29739620 + 30032202 116898302 MODEL JAAIVD010000003;XM_032899648 XP_032755539 cell surface glycoprotein CD200 receptor 2 protein-coding 625954088 Lancl2 LanC like glutathione S-transferase 2 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of abscisic acid-activated signaling pathway (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 83516349 83566663 + 22301074;30032202 116903735 MODEL JAAIVD010000024;XM_032906420 XP_032762311 LanC like 2;lanC-like protein 2 protein-coding 625954101 Scand1 SCAN domain containing 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 5 135661055 135661917 - 116902202 MODEL JAAIVD010000023;XM_032904580 XP_032760471 SCAN domain-containing protein 1 protein-coding 625954107 LOC116893259 uncharacterized protein C9orf85 homolog 2 136543486 136543756 - 116893259 MODEL JAAIVD010000001 pseudo 625954108 Slc35f3 solute carrier family 35 member F3 INVOLVED IN thiamine transport (ortholog) 17 45645350 45910726 + 22301074;30032202 116886144 MODEL JAAIVD010000011;XM_032887497;XM_032887498 XP_032743388;XP_032743389 putative thiamine transporter SLC35F3 protein-coding 625954123 LOC116887487 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9191743 9217981 - 30032202 116887487 MODEL JAAIVD010000013;XM_032889111;XM_032889112 XP_032745002;XP_032745003 protein-coding 625954138 Tmed1 transmembrane p24 trafficking protein 1 FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 8 17779370 17782341 - 30032202 116907682 MODEL JAAIVD010000027;XM_032910787;XM_032910788 XP_032766678;XP_032766679 transmembrane emp24 domain-containing protein 1 protein-coding 625954152 LOC116886247 carbohydrate sulfotransferase 5 17 31585097 31586952 - 22301074;30032202 116886247 MODEL JAAIVD010000011;XM_032887660 XP_032743551 protein-coding 625954157 LOC116902967 40S ribosomal protein S23-like 6 127749804 127750236 + 116902967 MODEL JAAIVD010000024 pseudo 625954158 Akap12 A-kinase anchoring protein 12 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 2 199045721 199135007 + 22301074;30032202 116892889 MODEL JAAIVD010000001;XM_032894797 XP_032750688 A-kinase anchor protein 12 protein-coding 625954166 LOC116891868 eukaryotic translation initiation factor 5-like 2 113499660 113501006 - 116891868 MODEL JAAIVD010000001 pseudo 625954167 Ppp4r4 protein phosphatase 4 regulatory subunit 4 ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytoplasm (ortholog) 7 114799749 114887711 + 22301074;30032202 116905374 MODEL JAAIVD010000026;XM_032908312 XP_032764203 serine/threonine-protein phosphatase 4 regulatory subunit 4 protein-coding 625954196 LOC116894069 olfactory receptor 51G1 2 102919250 102920191 - 22301074 116894069 MODEL JAAIVD010000001;XM_032895792 XP_032751683 protein-coding 625954199 LOC116883483 type-1A angiotensin II receptor 14 49371128 49417215 + 22301074;30032202 116883483 MODEL JAAIVD010000009;XM_032884638;XM_032884639 XP_032740529;XP_032740530 protein-coding 625954209 LOC116885014 thymosin beta-10-like 15 63507617 63507800 - 22301074;30032202 116885014 MODEL JAAIVD010000010;XM_032886255 XP_032742146 protein-coding 625954213 LOC116889643 phosphoglycerate kinase-like 22301074;30032202 116889643 MODEL JAAIVD010000038;XM_032890550 XP_032746441 protein-coding 625954214 LOC116898240 60S ribosomal protein L37a 4 152738930 152739306 - 22301074;2546769 116898240 MODEL JAAIVD010000003;X14069;XM_032899591 CAA32232;XP_032755482 protein-coding 625954219 Mlec malectin ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog) 16 38669500 38681018 + 30032202 116885194 MODEL JAAIVD010000004;XM_032886413;XM_032886414 XP_032742304;XP_032742305 protein-coding 625954232 LOC116889318 ferritin heavy polypeptide-like 17 X 126458234 126459056 + 22301074;30032202 116889318 MODEL JAAIVD010000014;XM_032890443 XP_032746334 protein-coding 625954237 LOC116902806 protein MMS22-like 1 118988985 118994325 - 116902806 MODEL JAAIVD010000025 pseudo 625954238 LOC116913251 60S ribosomal protein L10-like 12 81590943 81591585 - 116913251 MODEL JAAIVD010000007 pseudo 625954239 LOC116913685 olfactory receptor 11G2-like 12 72698866 72705201 - 22301074 116913685 MODEL JAAIVD010000007;XM_032917976;XM_032917977 XP_032773867;XP_032773868 protein-coding 625954246 Pitpnm2 phosphatidylinositol transfer protein membrane associated 2 ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidylinositol transfer activity (ortholog); receptor tyrosine kinase binding (ortholog); FOUND IN cell body (ortholog) 16 29615061 29746605 + 22301074;30032202 116885515 MODEL JAAIVD010000004;XM_032886806;XM_032886807;XM_032886808;XM_032886809;XM_032886810;XM_032886811 XP_032742697;XP_032742698;XP_032742699;XP_032742700;XP_032742701;XP_032742702 membrane-associated phosphatidylinositol transfer protein 2 protein-coding 625954292 LOC116883566 histone H2A type 1-B 14 41976889 41977871 - 22301074;30032202 116883566 MODEL JAAIVD010000009;XM_032884747 XP_032740638 protein-coding 625954297 Fsd2 fibronectin type III and SPRY domain containing 2 ASSOCIATED WITH colorectal cancer (ortholog) 2 118692147 118724675 + 22301074 116894266 MODEL JAAIVD010000001;XM_032895972;XM_032895973;XM_032895975 XP_032751863;XP_032751864;XP_032751866 fibronectin type III and SPRY domain-containing protein 2 protein-coding 625954321 Adgrg4 adhesion G protein-coupled receptor G4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog) X 117307223 117400644 + 22301074;30032202 116888830 MODEL JAAIVD010000014;XM_032890105 XP_032745996 adhesion G-protein coupled receptor G4 protein-coding 625954346 Ppp6r3 protein phosphatase 6 regulatory subunit 3 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 4095924 4208392 + 22301074;30032202 116890808 MODEL JAAIVD010000001;XM_032891293;XM_032891294;XM_032891295;XM_032891296;XM_032891297;XM_032891298;XM_032891299;XM_032891300;XM_032891301;XM_032891302;XM_032891303;XM_032891304;XM_032891305 XP_032747184;XP_032747185;XP_032747186;XP_032747187;XP_032747188;XP_032747189;XP_032747190;XP_032747191;XP_032747192;XP_032747193;XP_032747194;XP_032747195;XP_032747196 serine/threonine-protein phosphatase 6 regulatory subunit 3 protein-coding 625954403 Ccdc18 coiled-coil domain containing 18 FOUND IN centriolar satellite (ortholog) 11 17941767 18037967 + 116912455 MODEL JAAIVD010000006;XM_032916522 XP_032772413 coiled-coil domain-containing protein 18 protein-coding 625954435 LOC116890287 calcipressin-3-like 1 23224899 23225247 + 116890287 MODEL JAAIVD010000025;XM_032890999 XP_032746890 protein-coding 625954439 Nppa natriuretic peptide A ENCODES a protein that exhibits guanylate cyclase activator activity (ortholog); hormone activity (ortholog); hormone receptor binding (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); cell growth involved in cardiac muscle cell development (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); adenocarcinoma (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 1 12774438 12775888 - 22301074;30032202 116886192 MODEL JAAIVD010000025;XM_032887567 XP_032743458 natriuretic peptides A protein-coding 625954446 Alg5 ALG5 dolichyl-phosphate beta-glucosyltransferase ENCODES a protein that exhibits dolichyl-phosphate beta-glucosyltransferase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH polycystic kidney disease 7 (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) 3 99655646 99669201 - 30032202 116896872 MODEL JAAIVD010000012;XM_032898415 XP_032754306 dolichyl-phosphate beta-glucosyltransferase protein-coding 625954460 Ccdc69 coiled-coil domain containing 69 INVOLVED IN spindle midzone assembly (ortholog); FOUND IN spindle midzone (ortholog) 9 37479617 37505734 - 30032202 116909491 MODEL JAAIVD010000002;XM_032913089 XP_032768980 coiled-coil domain-containing protein 69 protein-coding 625954471 Eef2kmt eukaryotic elongation factor 2 lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) 9 16661566 16671963 + 116909222 MODEL JAAIVD010000002;XM_032912723;XM_032912724 XP_032768614;XP_032768615 protein-lysine N-methyltransferase EEF2KMT protein-coding 625954484 Fam151a family with sequence similarity 151 member A ASSOCIATED WITH colorectal adenocarcinoma (ortholog) 1 48062836 48075446 - 30032202 116899363 MODEL JAAIVD010000025;XM_032901075 XP_032756966 protein FAM151A protein-coding 625954496 LOC116886322 bolA-like protein 2 17 43610700 43611215 - 30032202 116886322 MODEL JAAIVD010000011;XM_032887770 XP_032743661 protein-coding 625954501 Eif3l eukaryotic translation initiation factor 3 subunit L ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 8 105583247 105585114 - 22301074;30032202 116907837 MODEL JAAIVD010000027;XM_032911021;XM_032911023 XP_032766912;XP_032766914 protein-coding 625954509 Ift140 intraflagellar transport 140 INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); autosomal dominant polycystic kidney disease (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) 9 2292706 2369881 + 22301074;30032202 116910459 MODEL JAAIVD010000002;XM_032914328;XM_032914329 XP_032770219;XP_032770220 intraflagellar transport protein 140 homolog protein-coding 625954545 LOC116910328 peptidyl-prolyl cis-trans isomerase D-like 9 59520047 59522919 + 116910328 MODEL JAAIVD010000002 pseudo 625954546 Sstr1 somatostatin receptor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cerebellum development (ortholog); PARTICIPATES IN somatostatin signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); pancreatic cancer (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); G protein-coupled receptor homodimeric complex (ortholog) 7 71553298 71557798 + 22301074;30032202 116905075 MODEL JAAIVD010000026;XM_032907782;XM_032907783 XP_032763673;XP_032763674 somatostatin receptor type 1 protein-coding 625954554 Swi5 SWI5 homologous recombination repair protein INVOLVED IN cellular response to ionizing radiation (ortholog); double-strand break repair via homologous recombination (ortholog); FOUND IN nucleus (ortholog); Swi5-Sfr1 complex (ortholog) 5 3342609 3351539 + 30032202 116901151 MODEL JAAIVD010000023;XM_032902792 XP_032758683 DNA repair protein SWI5 homolog protein-coding 625954563 Bcl11b BCL11 transcription factor B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); combined immunodeficiency (ortholog); COVID-19 (ortholog); FOUND IN neuron projection (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) 7 125574488 125690359 - 30032202 116905445 MODEL JAAIVD010000026;XM_032908394 XP_032764285 B-cell lymphoma/leukemia 11B;BAF chromatin remodeling complex subunit BCL11B protein-coding 625954571 LOC116902633 small nucleolar RNA SNORD11 5 6640881 6640964 - 116902633 MODEL JAAIVD010000023;XR_004388210 snorna 625954574 LOC116901864 histone H3.3A-like 1 99147977 99148975 - 22301074;30032202 116901864 MODEL JAAIVD010000025;XM_032904065 XP_032759956 protein-coding 625954579 Yars2 tyrosyl-tRNA synthetase 2 ENCODES a protein that exhibits L-tyrosine binding (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial tyrosyl-tRNA aminoacylation (ortholog); tRNA aminoacylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial metabolism disease (ortholog); myopathy, lactic acidosis, and sideroblastic anemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 4 1571956 1577716 + 22301074;30032202 116898615 MODEL JAAIVD010000003;XM_032899825 XP_032755716 tyrosine--tRNA ligase, mitochondrial protein-coding 625954588 LOC116897804 60S ribosomal protein L23-like 4 9858117 9874010 + 116897804 MODEL JAAIVD010000003 pseudo 625954589 LOC116887251 olfactory receptor 2G3-like 18 10597659 10598690 - 22301074 116887251 MODEL JAAIVD010000013;XM_032888818 XP_032744709 protein-coding 625954593 LOC116901968 uncharacterized LOC116901968 5 110289686 110291586 + 116901968 MODEL JAAIVD010000023;XR_004388032 ncrna 625954597 Stx4 syntaxin 4 ENCODES a protein that exhibits small GTPase binding (ortholog); SNAP receptor activity (ortholog); SNARE binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to type II interferon (ortholog); cornified envelope assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 123 (ortholog); Prostatic Neoplasms (ortholog); sensorineural hearing loss (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 2 74056705 74064214 - 22301074;30032202 116891455 MODEL JAAIVD010000001;XM_032892528;XM_032892529;XM_032892530;XM_032892531 XP_032748419;XP_032748420;XP_032748421;XP_032748422 syntaxin-4 protein-coding 625954625 Creb3l3 cAMP responsive element binding protein 3 like 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH HYPERTRIGLYCERIDEMIA 1 (ortholog); HYPERTRIGLYCERIDEMIA 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); nucleus (ortholog) 1 153796381 153805231 + 30032202 116889859 MODEL JAAIVD010000025;XM_032890686 XP_032746577 cyclic AMP-responsive element-binding protein 3-like protein 3 protein-coding 625954639 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 95716316 95716387 + 116908470 MODEL JAAIVD010000027 trna 625954640 Wnt5b Wnt family member 5B ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); leiomyoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) 6 27309087 27322754 + 22301074;30032202 116904612 MODEL JAAIVD010000024;XM_032907404 XP_032763295 protein Wnt-5b protein-coding 625954647 Sec23ip SEC23 interacting protein INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatid development (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum exit site (ortholog); Golgi apparatus (ortholog) 2 73162599 73199377 - 22301074;30032202 116891429 MODEL JAAIVD010000001;XM_032892482 XP_032748373 SEC23-interacting protein protein-coding 625954669 LOC116903112 40S ribosomal protein S23-like 6 6487809 6489207 - 116903112 MODEL JAAIVD010000024 pseudo 625954670 LOC116902827 taste receptor type 2 member 120 6 16423784 16424671 + 22301074;30032202 116902827 MODEL JAAIVD010000024;XM_032905158 XP_032761049 protein-coding 625954673 Chl1 cell adhesion molecule L1 like ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axon guidance (ortholog); axon regeneration (ortholog); ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); Peripheral Nerve Injuries (ortholog); FOUND IN apical part of cell (ortholog); dendrite (ortholog) 6 43373163 43710511 - 30032202 116903454 MODEL JAAIVD010000024;XM_032906006;XM_032906007;XM_032906008 XP_032761897;XP_032761898;XP_032761899 neural cell adhesion molecule L1-like protein protein-coding 625954705 Syt9 synaptotagmin 9 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); regulation of calcium ion-dependent exocytosis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; insulin secretion pathway; FOUND IN dense core granule (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); secretory granule (ortholog) 2 105490591 105657294 + 22301074;30032202 116891833 MODEL JAAIVD010000001;XM_032893200;XM_032893201 XP_032749091;XP_032749092 synaptotagmin-9 protein-coding 625954719 LOC116896026 eukaryotic translation initiation factor 1-like 3 183045003 183045400 - 22301074;30032202 116896026 MODEL JAAIVD010000012;XM_032897034 XP_032752925 protein-coding 625954723 LOC116912038 uncharacterized LOC116912038 1 236343933 236557774 - 116912038 MODEL JAAIVD010000025;XR_004389415;XR_004389416;XR_004389417;XR_004389418 ncrna 625954739 LOC116889951 olfactory receptor 6C3-like 1 161609779 161610735 - 22301074;30032202 116889951 MODEL JAAIVD010000025;XM_032890754 XP_032746645 protein-coding 625954743 Eif4e1b eukaryotic translation initiation factor 4E family member 1B 14 73122678 73125828 + 22301074;30032202 116883711 MODEL JAAIVD010000009;XM_032884924 XP_032740815 eukaryotic translation initiation factor 4E type 1B protein-coding 625954753 LOC116893354 keratin-associated protein 19-2-like 2 158642235 158642666 - 116893354 MODEL JAAIVD010000001;XM_032895159 XP_032751050 protein-coding 625954756 LOC116902810 putative vomeronasal receptor-like protein 4 6 83825131 83826030 + 22301074;30032202 116902810 MODEL JAAIVD010000024;XM_032905143 XP_032761034 protein-coding 625954759 LOC116902542 U1 spliceosomal RNA 5 51850012 51850166 - 116902542 MODEL JAAIVD010000023 pseudo 625954760 LOC116898379 mortality factor 4-like protein 2 4 70233870 70250908 + 116898379 MODEL JAAIVD010000003 pseudo 625954761 LOC116887171 olfactory receptor 2A12-like 1 38055812 38056806 + 22301074 116887171 MODEL JAAIVD010000025;XM_032888726 XP_032744617 protein-coding 625954765 Pcyt1b phosphate cytidylyltransferase 1B, choline ENCODES a protein that exhibits choline-phosphate cytidylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN CDP-choline pathway (ortholog); ovarian follicle development (ortholog); phosphatidylcholine biosynthetic process (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog) X 51682597 51745562 - 30032202 116888374 MODEL JAAIVD010000014;XM_032889650;XM_032889651 XP_032745541;XP_032745542 choline-phosphate cytidylyltransferase B;phosphate cytidylyltransferase 1, choline, beta protein-coding 625954780 Actl7b actin like 7B FOUND IN cytoplasm (ortholog) 1 94871127 94872660 + 30032202 116888560 MODEL JAAIVD010000025;XM_032889867 XP_032745758 actin-like protein 7B protein-coding 625954785 Cebpe CCAAT enhancer binding protein epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute promyelocytic leukemia (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 12 70289897 70291302 + 30032202 116913381 MODEL JAAIVD010000007;XM_032917556 XP_032773447 CCAAT/enhancer-binding protein epsilon protein-coding 625954789 LOC116914370 uncharacterized LOC116914370 13 78193057 78194814 + 116914370 MODEL JAAIVD010000008 pseudo 625954790 LOC116894235 40S ribosomal protein S19-like 2 112105381 112105836 + 116894235 MODEL JAAIVD010000001 pseudo 625954791 LOC116887969 E3 ubiquitin-protein ligase RLIM-like X 66377626 66391909 - 116887969 MODEL JAAIVD010000014 pseudo 625954792 Slc17a7 solute carrier family 17 member 7 ENCODES a protein that exhibits chloride channel activity (ortholog); extracellularly glutamate-gated chloride channel activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chloride transport (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH learning disability (ortholog); Memory Disorders (ortholog); sciatic neuropathy (ortholog); FOUND IN cerebellar mossy fiber (ortholog); excitatory synapse (ortholog); membrane (ortholog) 2 154365860 154377704 - 22301074;30032202 116892163 MODEL JAAIVD010000001;XM_032893658;XM_032893659 XP_032749549;XP_032749550 vesicular glutamate transporter 1 protein-coding 625954812 LOC116910243 60S ribosomal protein L14-like 9 67479606 67480424 - 116910243 MODEL JAAIVD010000002 pseudo 625954813 Kcnq4 potassium voltage-gated channel subfamily Q member 4 ENCODES a protein that exhibits potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); negative regulation of synaptic transmission, dopaminergic (ortholog); potassium ion transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2A (ortholog); genetic disease (ortholog); Hearing Loss (ortholog) 1 36252984 36304156 + 22301074;30032202 116908316 MODEL JAAIVD010000025;XM_032911896 XP_032767787 potassium voltage-gated channel subfamily KQT member 4 protein-coding 625954831 LOC116903037 putative vomeronasal receptor-like protein 4 6 159367708 159368619 - 22301074;30032202 116903037 MODEL JAAIVD010000024;XM_032905340 XP_032761231 protein-coding 625954835 Ereg epiregulin ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH cholesteatoma (ortholog); erythropoietic protoporphyria (ortholog); Experimental Colitis (ortholog); FOUND IN extracellular space (ortholog) 11 4474473 4488608 + 30032202 116912816 MODEL JAAIVD010000006;XM_032916984 XP_032772875 proepiregulin protein-coding 625954844 LOC116907150 G1/S-specific cyclin-D3-like 8 66825203 66826115 + 116907150 MODEL JAAIVD010000027 pseudo 625954845 LOC116895578 28S ribosomal protein L42, mitochondrial-like 3 137461619 137462029 - 116895578 MODEL JAAIVD010000012 pseudo 625954846 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 219616116 219616188 + 116895133 MODEL JAAIVD010000001 trna 625954847 Dnah10 dynein axonemal heavy chain 10 ASSOCIATED WITH Asthenozoospermia (ortholog); atrial fibrillation (ortholog); genetic disease (ortholog) 16 29095249 29217171 - 22301074;30032202 116885257 MODEL JAAIVD010000004;XM_032886496 XP_032742387 dynein heavy chain 10, axonemal protein-coding 625954929 Ak3 adenylate kinase 3 ENCODES a protein that exhibits AMP kinase activity (ortholog); identical protein binding (ortholog); nucleoside triphosphate adenylate kinase activity (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); AMP phosphorylation (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo purine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH chronic lymphocytic leukemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 29085986 29111913 - 22301074;30032202 116891069 MODEL JAAIVD010000001;XM_032891773 XP_032747664 GTP:AMP phosphotransferase AK3, mitochondrial protein-coding 625954938 Usp26 ubiquitin specific peptidase 26 ENCODES a protein that exhibits deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); regulation of androgen receptor signaling pathway (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); male infertility (ortholog); oligospermia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 115132756 115176705 - 22301074;30032202 116888258 MODEL JAAIVD010000014;XM_032889540 XP_032745431 ubiquitin carboxyl-terminal hydrolase 26 protein-coding 625954950 LOC116896259 uncharacterized LOC116896259 3 29263516 29269575 + 116896259 MODEL JAAIVD010000012;XR_004387319 ncrna 625954954 LOC116896862 40S ribosomal protein S4, X isoform-like 1 87185541 87186344 + 116896862 MODEL JAAIVD010000025 pseudo 625954955 LOC116915065 39S ribosomal protein L48, mitochondrial-like 13 38383413 38384032 + 116915065 MODEL JAAIVD010000008 pseudo 625954956 LOC116914939 ZW10 interactor-like 13 10034903 10035976 - 116914939 MODEL JAAIVD010000008 pseudo 625954957 LOC116912139 60 kDa heat shock protein, mitochondrial-like 11 26208105 26209983 + 116912139 MODEL JAAIVD010000006 pseudo 625954958 Smad5 SMAD family member 5 ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); bone development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); granulosa cell tumor (ortholog); Testicular Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 81340107 81351076 - 22301074;30032202 116883340 MODEL JAAIVD010000009;XM_032884413 XP_032740304 mothers against decapentaplegic homolog 5 protein-coding 625954968 LOC116889434 U6 spliceosomal RNA X 74921438 74921540 - 116889434 MODEL JAAIVD010000014;XR_004386396 snrna 625954971 LOC116910476 uncharacterized LOC116910476 9 49282643 49296239 + 116910476 MODEL JAAIVD010000002;XM_032914351 XP_032770242 uncharacterized protein LOC116910476 protein-coding 625954977 Rbm20 RNA binding motif protein 20 ENCODES a protein that exhibits pre-mRNA intronic binding (ortholog); RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN heart formation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of RNA splicing (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); cardiac arrest (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) 2 53114327 53307255 + 22301074;30032202 116893821 MODEL JAAIVD010000001;XM_032895534 XP_032751425 RNA-binding protein 20 protein-coding 625954994 LOC116894353 glandular kallikrein-3, submandibular-like 2 155342525 155346313 - 116894353 MODEL JAAIVD010000001 pseudo 625954995 Kndc1 kinase non-catalytic C-lobe domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); regulation of dendrite development (ortholog); regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); guanyl-nucleotide exchange factor complex (ortholog); neuronal cell body (ortholog) 2 61913466 61962327 - 22301074;30032202 116891357 MODEL JAAIVD010000001;XM_032892353 XP_032748244 kinase non-catalytic C-lobe domain-containing protein 1 protein-coding 625955029 LOC116894193 olfactory receptor 481 2 106110505 106111446 + 22301074;30032202 116894193 MODEL JAAIVD010000001;XM_032895907 XP_032751798 protein-coding 625955033 Kcnq3 potassium voltage-gated channel subfamily Q member 3 ENCODES a protein that exhibits calmodulin binding (ortholog); potassium channel activity (ortholog); protein kinase binding (ortholog); INVOLVED IN action potential initiation (ortholog); apoptosome assembly (ortholog); cellular response to ammonium ion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN axon initial segment (ortholog); cell surface (ortholog); dendrite (ortholog) 1 240136667 240429889 - 22301074;30032202 116912196 MODEL JAAIVD010000025;XM_032916133;XM_032916142 XP_032772024;XP_032772033 potassium voltage-gated channel subfamily KQT member 3 protein-coding 625955056 LOC116893129 glyceraldehyde-3-phosphate dehydrogenase-like 2 79054231 79055266 - 116893129 MODEL JAAIVD010000001 pseudo 625955057 LOC116911685 COP9 signalosome complex subunit 2-like 10 81955079 81957019 + 22301074;30032202 116911685 MODEL JAAIVD010000005;XM_032915640 XP_032771531 protein-coding 625955062 LOC116904709 small nucleolar RNA SNORA17 6 62403148 62403276 + 116904709 MODEL JAAIVD010000024;XR_004388404 snorna 625955065 LOC116883839 zinc finger protein 431-like 14 76890956 76906138 - 30032202 116883839 MODEL JAAIVD010000009;XM_032885102 XP_032740993 protein-coding 625955073 LOC116896599 protein argonaute-4 1 31773900 31808502 + 22301074 116896599 MODEL JAAIVD010000025;XM_032897851;XM_032897858 XP_032753742;XP_032753749 protein-coding 625955097 LOC116902893 transcription elongation factor SPT4-A-like 6 104246038 104246395 - 116902893 MODEL JAAIVD010000024 pseudo 625955098 Dcdc2 doublecortin domain containing 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN cilium assembly (ortholog); dendrite morphogenesis (ortholog); neuron migration (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive nonsyndromic deafness 66 (ortholog); chylomicron retention disease (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 14 44083809 44242558 + 22301074;30032202 116883761 MODEL JAAIVD010000009;XM_032885007 XP_032740898 doublecortin domain-containing protein 2 protein-coding 625955112 Ext2 exostosin glycosyltransferase 2 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); chondrocyte differentiation (ortholog); endochondral bone morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); hereditary multiple exostoses (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 5 67867743 68002009 - 22301074;30032202 116901654 MODEL JAAIVD010000023;XM_032903764 XP_032759655 exostosin-2 protein-coding 625955130 Sass6 SAS-6 centriolar assembly protein INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); positive regulation of centriole replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary autosomal recessive microcephaly 14 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 3 43094222 43125926 - 30032202 116896326 MODEL JAAIVD010000012;XM_032897420;XM_032897421 XP_032753311;XP_032753312 spindle assembly abnormal protein 6 homolog protein-coding 625955155 LOC116900440 olfactory receptor 4C15-like 5 70813269 70814204 - 22301074 116900440 MODEL JAAIVD010000023;XM_032902181 XP_032758072 protein-coding 625955158 Spag16 sperm associated antigen 16 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cell motility in response to calcium ion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN axonemal central apparatus (ortholog); axoneme (ortholog); cytoplasm (ortholog) 4 143567906 144091516 + 22301074;30032202 116898535 MODEL JAAIVD010000003;XM_032899754 XP_032755645 sperm-associated antigen 16 protein protein-coding 625955180 LOC116904539 S-formylglutathione hydrolase-like 6 15558505 15561298 - 116904539 MODEL JAAIVD010000024 pseudo 625955181 Mvb12a multivesicular body subunit 12A ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); ESCRT I complex (ortholog) 13 13417088 13421770 - 22301074;30032202 116914731 MODEL JAAIVD010000008;XM_032919164;XM_032919165 XP_032775055;XP_032775056 protein-coding 625955199 LOC116913340 protein SET-like 12 54799620 54826778 - 116913340 MODEL JAAIVD010000007 pseudo 625955200 Foxd2 forkhead box D2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 1 41673150 41676006 + 30032202 116898819 MODEL JAAIVD010000025;XM_032900175 XP_032756066 forkhead box protein D2 protein-coding 625955205 Creb3l2 cAMP responsive element binding protein 3 like 2 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte differentiation (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; FOUND IN chromatin (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 6 102440689 102553370 + 30032202 116903959 MODEL JAAIVD010000024;XM_032906747 XP_032762638 cyclic AMP-responsive element-binding protein 3-like protein 2 protein-coding 625955221 Whamm WASP homolog associated with actin, golgi membranes and microtubules ENCODES a protein that exhibits Arp2/3 complex binding (ortholog); microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); focal adhesion assembly (ortholog); ASSOCIATED WITH Fanconi syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog); Golgi membrane (ortholog) 2 118662875 118688189 - 22301074;30032202 116891901 MODEL JAAIVD010000001;XM_032893318 XP_032749209 WASP homolog-associated protein with actin, membranes and microtubules protein-coding 625955235 Phlda1 pleckstrin homology like domain family A member 1 INVOLVED IN forebrain neuron differentiation (ortholog); glycoprotein biosynthetic process (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); atrial fibrillation (ortholog); cognitive disorder (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 1 189686465 189688716 + 30032202 116908914 MODEL JAAIVD010000025;XM_032912373 XP_032768264 pleckstrin homology-like domain family A member 1 protein-coding 625955241 Rspo4 R-spondin 4 INVOLVED IN nail development (ortholog); positive regulation of Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); nonsyndromic congenital nail disorder 4 (ortholog) 5 131213311 131246022 + 116901041 MODEL JAAIVD010000023;XM_032902622 XP_032758513 R-spondin-4 protein-coding 625955250 LOC116906259 Ig heavy chain V-III region T957-like 7 122622752 122623233 - 116906259 MODEL JAAIVD010000026 pseudo 625955251 LOC116894253 vomeronasal type-2 receptor 116-like 2 115133878 115173675 - 22301074;30032202 116894253 MODEL JAAIVD010000001;XM_032895959 XP_032751850 protein-coding 625955259 Lypd2 LY6/PLAUR domain containing 2 1 247475028 247477057 - 30032202 116890132 MODEL JAAIVD010000025;XM_032890869 XP_032746760 ly6/PLAUR domain-containing protein 2 protein-coding 625955266 LOC116898577 ubiquitin-40S ribosomal protein S27a-like 4 163830160 163830644 - 116898577 MODEL JAAIVD010000003 pseudo 625955267 Tns1 tensin 1 INVOLVED IN cell-substrate junction assembly (ortholog); fibroblast migration (ortholog); FOUND IN cell-substrate junction (ortholog); focal adhesion (ortholog) 4 147367235 147576236 - 22301074;30032202 116899493 MODEL JAAIVD010000003;XM_032901325 XP_032757216 tensin-1 protein-coding 625955303 LOC116895182 ATP synthase subunit g, mitochondrial-like 3 169749933 169750486 + 116895182 MODEL JAAIVD010000012 pseudo 625955304 Ruvbl1 RuvB like AAA ATPase 1 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN ciliary basal body (ortholog); cytosol (ortholog); Ino80 complex (ortholog) 6 57822841 57857284 - 22301074;30032202 116903524 MODEL JAAIVD010000024;XM_032906134 XP_032762025 ruvB-like 1 protein-coding 625955319 LOC116902745 N-acetyltransferase family 8 member 3-like 6 60491623 60492638 + 30032202 116902745 MODEL JAAIVD010000024;XM_032905093 XP_032760984 protein-coding 625955324 Sox1 SRY-box transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); forebrain development (ortholog); forebrain neuron development (ortholog); FOUND IN nucleus (ortholog) 13 71303331 71304503 - 116914361 MODEL JAAIVD010000008;XM_032918571 XP_032774462 transcription factor SOX-1 protein-coding 625955328 Apoc2 apolipoprotein C2 ENCODES a protein that exhibits identical protein binding (ortholog); lipase inhibitor activity (ortholog); lipid binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); chylomicron remnant clearance (ortholog); chylomicron remodeling (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Coronary Disease (ortholog); diabetes mellitus (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); intermediate-density lipoprotein particle (ortholog) 2 170940090 170945166 + 22301074;30032202 116892517 MODEL JAAIVD010000001;XM_032894273 XP_032750164 apolipoprotein C-II protein-coding 625955336 Tbccd1 TBCC domain containing 1 INVOLVED IN maintenance of centrosome location (ortholog); maintenance of Golgi location (ortholog); regulation of cell migration (ortholog); FOUND IN spindle pole centrosome (ortholog) 4 7497496 7533176 - 30032202 116898721 MODEL JAAIVD010000003;XM_032900016;XM_032900017;XM_032900018 XP_032755907;XP_032755908;XP_032755909 TBCC domain-containing protein 1 protein-coding 625955356 LOC116914942 ral guanine nucleotide dissociation stimulator-like 13 11523901 11525666 - 116914942 MODEL JAAIVD010000008 pseudo 625955357 LOC116902770 polypyrimidine tract-binding protein 1-like 6 72946375 72948156 - 22301074;30032202 116902770 MODEL JAAIVD010000024;XM_032905112 XP_032761003 protein-coding 625955361 Samd15 sterile alpha motif domain containing 15 7 101294726 101308587 + 22301074 116905319 MODEL JAAIVD010000026;XM_032908210 XP_032764101 sterile alpha motif domain-containing protein 15 protein-coding 625955368 LOC116907511 ATP synthase subunit g, mitochondrial-like 1 157290410 157292841 + 116907511 MODEL JAAIVD010000025 pseudo 625955369 LOC116908219 5'-nucleotidase domain-containing protein 2-like 8 74256275 74299790 + 116908219 MODEL JAAIVD010000027 pseudo 625955370 LOC116914162 U4 spliceosomal RNA 12 77797939 77798063 - 116914162 MODEL JAAIVD010000007 pseudo 625955371 LOC116906723 60S ribosomal protein L29-like 8 30623252 30623719 + 116906723 MODEL JAAIVD010000027 pseudo 625955372 LOC116902854 olfactory receptor 2A2-like 6 97492563 97493492 - 22301074 116902854 MODEL JAAIVD010000024;XM_032905182 XP_032761073 protein-coding 625955375 Mcf2l MCF.2 cell line derived transforming sequence like ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); endomembrane system (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 13 70669136 70817171 - 22301074;30032202 116914880 MODEL JAAIVD010000008;XM_032919323 XP_032775214 guanine nucleotide exchange factor DBS protein-coding 625955412 LOC116899853 small nucleolar RNA SNORA17 4 115880723 115880850 + 116899853 MODEL JAAIVD010000003;XR_004387849 snorna 625955415 Mfap2 microfibril associated protein 2 ENCODES a protein that exhibits fibrinogen binding (ortholog); fibronectin binding (ortholog); INVOLVED IN embryonic eye morphogenesis (ortholog); platelet formation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH ovarian cyst (ortholog); FOUND IN microfibril (ortholog) 1 17131308 17137064 - 22301074;30032202 116893503 MODEL JAAIVD010000025;XM_032895243 XP_032751134 microfibrillar-associated protein 2 protein-coding 625955428 LOC116890350 U6 spliceosomal RNA 1 154406969 154407073 - 116890350 MODEL JAAIVD010000025;XR_004386570 snrna 625955431 Prxl2b peroxiredoxin like 2B ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); prostaglandin F synthase activity (ortholog); prostaglandin H2 endoperoxidase reductase activity (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); prostaglandin biosynthetic process (ortholog); prostaglandin metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH pneumoconiosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 5816157 5818846 + 116892094 MODEL JAAIVD010000025;XM_032893573 XP_032749464 prostamide/prostaglandin F synthase protein-coding 625955442 Ylpm1 YLP motif containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 7 99104042 99181796 + 30032202 116905285 MODEL JAAIVD010000026;XM_032908146 XP_032764037 YLP motif-containing protein 1 protein-coding 625955467 Zfp37 ZFP37 zinc finger protein INVOLVED IN cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 91345857 91437058 + 22301074;30032202 116901449 MODEL JAAIVD010000025;XM_032903388 XP_032759279 zinc finger protein 37 homolog protein-coding 625955475 Mbtps1 membrane bound transcription factor peptidase, site 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); lysosome organization (ortholog); membrane protein intracellular domain proteolysis (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi membrane (ortholog); Golgi stack (ortholog) 17 39154366 39203560 - 22301074;30032202 116886053 MODEL JAAIVD010000011;XM_032887358 XP_032743249 membrane-bound transcription factor site-1 protease protein-coding 625955502 Fubp1 far upstream element binding protein 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); hematopoietic stem cell proliferation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); colorectal carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 3 9376649 9402290 - 22301074;30032202 116896156 MODEL JAAIVD010000012;XM_032897142;XM_032897143;XM_032897144;XM_032897145;XM_032897146;XM_032897147 XP_032753033;XP_032753034;XP_032753035;XP_032753036;XP_032753037;XP_032753038 far upstream element-binding protein 1 protein-coding 625955540 Abhd10 abhydrolase domain containing 10, depalmitoylase ENCODES a protein that exhibits hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); xenobiotic metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 4 30452196 30466047 - 30032202 116898881 MODEL JAAIVD010000003;XM_032900253;XM_032900254 XP_032756144;XP_032756145 mycophenolic acid acyl-glucuronide esterase, mitochondrial protein-coding 625955554 Tubd1 tubulin delta 1 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH polydactyly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 84206875 84229348 - 22301074;30032202 116910097 MODEL JAAIVD010000002;XM_032913920 XP_032769811 tubulin delta chain protein-coding 625955568 Nfe2l1 NFE2 like bZIP transcription factor 1 ENCODES a protein that exhibits cholesterol binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular homeostasis (ortholog); cellular response to cholesterol (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); hepatocellular carcinoma (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 9 57556133 57568974 + 30032202 116908660 MODEL JAAIVD010000002;XM_032911936;XM_032911937;XM_032911938 XP_032767827;XP_032767828;XP_032767829 endoplasmic reticulum membrane sensor NFE2L1;nuclear factor, erythroid 2 like 1 protein-coding 625955583 LOC116909478 TBC1 domain family member 30-like 1 199248688 199254132 - 116909478 MODEL JAAIVD010000025;XM_032913075;XM_032913083 XP_032768966;XP_032768974 protein-coding 625955593 Vars2 valyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits valine-tRNA ligase activity (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 20 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 18 8875276 8885777 - 22301074;30032202 116887462 MODEL JAAIVD010000013;XM_032889069;XM_032889071 XP_032744960;XP_032744962 valine--tRNA ligase, mitochondrial protein-coding 625955631 Ilrun inflammation and lipid regulator with UBA-like and NBR1-like domains INVOLVED IN negative regulation of defense response to virus (ortholog); negative regulation of protein localization to nucleus (ortholog); negative regulation of tumor necrosis factor production (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 6035137 6102632 + 30032202 116886866 MODEL JAAIVD010000013;XM_032888322;XM_032888323 XP_032744213;XP_032744214 protein ILRUN protein-coding 625955642 Pkhd1 PKHD1 ciliary IPT domain containing fibrocystin/polyductin INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cell-cell junction organization (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); Caroli disease (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); apical plasma membrane (ortholog); centrosome (ortholog) 4 97482048 97939566 - 116898102 MODEL JAAIVD010000003;XM_032899487 XP_032755378 fibrocystin protein-coding 625955710 Clpb ClpB family mitochondrial disaggregase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein disaggregase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to heat (ortholog); granulocyte differentiation (ortholog); ASSOCIATED WITH 3-methylglutaconic aciduria type 7a (ortholog); 3-methylglutaconic aciduria type 7b (ortholog); 3-methylglutaconic aciduria with cataracts, neurologic involvement and neutropenia (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 2 99964845 100097407 + 22301074;30032202 116891765 MODEL JAAIVD010000001;XM_032893088;XM_032893089 XP_032748979;XP_032748980 caseinolytic mitochondrial matrix peptidase chaperone subunit B;caseinolytic peptidase B protein homolog protein-coding 625955734 Nkapl NFKB activating protein like ASSOCIATED WITH schizophrenia (ortholog) 14 40983650 40985197 + 22301074;30032202 116883642 MODEL JAAIVD010000009;XM_032884831 XP_032740722 NKAP-like protein protein-coding 625955739 Lrriq3 leucine rich repeats and IQ motif containing 3 3 6263123 6356258 - 22301074 116896135 MODEL JAAIVD010000012;XM_032897117 XP_032753008 leucine-rich repeat and IQ domain-containing protein 3 protein-coding 625955751 LOC116908009 heterogeneous nuclear ribonucleoprotein A3-like 8 114067959 114069165 + 116908009 MODEL JAAIVD010000027 pseudo 625955752 Lsm10 LSM10, U7 small nuclear RNA associated ENCODES a protein that exhibits histone pre-mRNA DCP binding (ortholog); U7 snRNA binding (ortholog); INVOLVED IN positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN Cajal body (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 32193771 32195920 - 30032202 116896718 MODEL JAAIVD010000025;XM_032898139;XM_032898148;XM_032898154;XM_032898162 XP_032754030;XP_032754039;XP_032754045;XP_032754053 U7 snRNA-associated Sm-like protein LSm10 protein-coding 625955769 Clul1 clusterin like 1 ASSOCIATED WITH Breast Neoplasms (ortholog) 4 182387005 182411893 + 116899728 MODEL JAAIVD010000003;XM_032901768 XP_032757659 clusterin-like protein 1 protein-coding 625955781 Zbtb25 zinc finger and BTB domain containing 25 FOUND IN nucleoplasm (ortholog) 7 90508463 90533394 - 22301074;30032202 116905179 MODEL JAAIVD010000026;XM_032907959;XM_032907960;XM_032907961;XM_032907962 XP_032763850;XP_032763851;XP_032763852;XP_032763853 zinc finger and BTB domain-containing protein 25 protein-coding 625955799 C3H3orf80 chromosome 3 C3orf80 homolog 3 86423713 86425408 - 116896798 MODEL JAAIVD010000012;XM_032898269 XP_032754160 uncharacterized membrane protein C3orf80 homolog protein-coding 625955804 Cib2 calcium and integrin binding family member 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to ATP (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 48 (ortholog); fundus dystrophy (ortholog); FOUND IN cuticular plate (ortholog); cytoplasm (ortholog); muscle tendon junction (ortholog) 8 48611010 48627784 - 22301074 116907309 MODEL JAAIVD010000027;XM_032910256;XM_032910257 XP_032766147;XP_032766148 calcium and integrin-binding family member 2 protein-coding 625955817 LOC116889043 uncharacterized LOC116889043 X 89092516 89095651 - 116889043 MODEL JAAIVD010000014;XR_004386362 ncrna 625955822 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42548882 42548954 - 116884194 MODEL JAAIVD010000009 trna 625955823 LOC116900313 olfactory receptor 141-like 5 64147173 64149305 - 22301074;30032202 116900313 MODEL JAAIVD010000023;XM_032902069 XP_032757960 protein-coding 625955828 Lhcgr luteinizing hormone/choriogonadotropin receptor ENCODES a protein that exhibits ATPase binding (ortholog); choriogonadotropin hormone binding (ortholog); choriogonadotropin hormone receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; luteinizing hormone signaling pathway; peptide and protein hormone signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); breast cancer (ortholog); disorder of sexual development (ortholog); FOUND IN centriolar satellite (ortholog); endosome (ortholog); extracellular space (ortholog) 7 4077790 4137727 + 22301074;30032202 116905621 MODEL JAAIVD010000026;XM_032908606 XP_032764497 lutropin-choriogonadotropic hormone receptor protein-coding 625955843 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 100347640 100347708 + 116904845 MODEL JAAIVD010000024 trna 625955844 LOC116886665 homeobox protein Rhox5-like 17 7616806 7617408 + 116886665 MODEL JAAIVD010000011 pseudo 625955845 LOC116887712 putative uncharacterized protein ZNRD1-AS1 18 9936487 9945672 + 116887712 MODEL JAAIVD010000013;XM_032889310;XM_032889311;XR_004386235;XR_004386236 XP_032745201;XP_032745202 protein-coding 625955862 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41461372 41461445 + 116884200 MODEL JAAIVD010000009 trna 625955863 LOC116900193 uncharacterized LOC116900193 5 48735819 48746439 - 116900193 MODEL JAAIVD010000023;XR_004387923 ncrna 625955868 Cdh1 cadherin 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); ankyrin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) 17 26323024 26391331 + 22301074;30032202 116886109 MODEL JAAIVD010000011;XM_032887441 XP_032743332 cadherin-1 protein-coding 625955888 Fmr1nb FMR1 neighbor X 126692320 126713518 - 116889349 MODEL JAAIVD010000014;XM_032890460 XP_032746351 fragile X mental retardation 1 neighbor protein protein-coding 625955899 LOC116889202 60S ribosomal protein L13-like X 32612598 32613217 + 116889202 MODEL JAAIVD010000014 pseudo 625955900 Cdk5rap1 CDK5RAP1 mitochondrial tRNA methylthiotransferase ENCODES a protein that exhibits protein-containing complex binding (ortholog); tRNA-2-methylthio-N(6)-dimethylallyladenosine(37) synthase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 133701238 133736256 - 22301074;30032202 116902156 MODEL JAAIVD010000023;XM_032904490;XM_032904491;XR_004388045;XR_004388046 XP_032760381;XP_032760382 CDK5 regulatory subunit associated protein 1;CDK5 regulatory subunit-associated protein 1 protein-coding 625955927 Nr2e1 nuclear receptor subfamily 2 group E member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN aggressive behavior (ortholog); amygdala development (ortholog); anterior commissure morphogenesis (ortholog); FOUND IN nucleus (ortholog) 18 42279665 42300667 - 22301074;30032202 116887499 MODEL JAAIVD010000013;XM_032889118 XP_032745009 protein-coding 625955940 Primpol primase and DNA directed polymerase ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed DNA polymerase activity (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN error-prone translesion synthesis (ortholog); mitochondrial DNA repair (ortholog); mitochondrial DNA replication (ortholog); ASSOCIATED WITH Myopia 22, Autosomal Dominant (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) 13 41309930 41344265 + 22301074;30032202 116914725 MODEL JAAIVD010000008;XM_032919155 XP_032775046 DNA-directed primase/polymerase protein protein-coding 625955958 LOC116903338 uncharacterized LOC116903338 6 26879547 26887539 - 116903338 MODEL JAAIVD010000024;XR_004388271 ncrna 625955963 LOC116912978 small nucleolar RNA SNORA17 11 3251330 3251461 + 116912978 MODEL JAAIVD010000006;XR_004389543 snorna 625955966 Fbp1 fructose-bisphosphatase 1 ENCODES a protein that exhibits AMP binding (ortholog); fructose 1,6-bisphosphate 1-phosphatase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); cellular hypotonic salinity response (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; fructosuria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Colonic Neoplasms (ortholog); fructose-1,6-bisphosphatase deficiency (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleus (ortholog) 14 76615759 76636807 + 22301074;30032202 116883863 MODEL JAAIVD010000009;XM_032885130 XP_032741021 fructose-1,6-bisphosphatase 1 protein-coding 625955977 Tead4 TEA domain transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN blastocyst formation (ortholog); cell fate commitment (ortholog); cell fate specification (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 19402790 19507661 + 22301074;30032202 116903225 MODEL JAAIVD010000024;XM_032905599 XP_032761490 transcriptional enhancer factor TEF-3 protein-coding 625955992 Evx2 even-skipped homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN limb morphogenesis (ortholog); ASSOCIATED WITH Synpolydactyly 1 (ortholog) 5 51997215 52000902 - 22301074;30032202 116900206 MODEL JAAIVD010000023;XM_032901960 XP_032757851 homeobox even-skipped homolog protein 2 protein-coding 625955997 LOC116889444 U6 snRNA-associated Sm-like protein LSm6 1 237773789 237774614 + 116889444 MODEL JAAIVD010000025 pseudo 625955998 LOC116904133 uncharacterized LOC116904133 6 137908309 137910151 + 116904133 MODEL JAAIVD010000024;XR_004388331 ncrna 625956002 Rpp30 ribonuclease P/MRP subunit p30 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); ribonuclease MRP complex (ortholog) 2 37729238 37750803 - 22301074;30032202 116891141 MODEL JAAIVD010000001;XM_032891884 XP_032747775 ribonuclease P protein subunit p30 protein-coding 625956017 Ucn2 urocortin 2 ENCODES a protein that exhibits corticotropin-releasing hormone receptor 2 binding (ortholog); corticotropin-releasing hormone receptor binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH Anorexia (ortholog); atherosclerosis (ortholog); colitis (ortholog); FOUND IN extracellular space (ortholog) 8 100261272 100262806 + 22301074;30032202 116908284 MODEL JAAIVD010000027;XM_032911544 XP_032767435 urocortin-2 protein-coding 625956023 Pld3 phospholipase D family member 3 ENCODES a protein that exhibits phospholipase D activity (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN myotube differentiation (ortholog); regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Alzheimer's disease 19 (ortholog); COVID-19 (ortholog); spinocerebellar ataxia 46 (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 2 168390366 168413172 + 22301074 116892423 MODEL JAAIVD010000001;XM_032894106;XM_032894108;XM_032894109;XM_032894110 XP_032749997;XP_032749999;XP_032750000;XP_032750001 phospholipase D3 protein-coding 625956049 Rftn1 raftlin, lipid raft linker 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); dsRNA transport (ortholog); membrane raft assembly (ortholog); ASSOCIATED WITH glaucoma (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); membrane raft (ortholog) 4 79769886 79951058 + 116899060 MODEL JAAIVD010000003;XM_032900531 XP_032756422 raftlin protein-coding 625956062 LOC116913743 protein ATP6V1FNB 12 78391951 78395211 + 116913743 MODEL JAAIVD010000007;XM_032918049 XP_032773940 protein-coding 625956067 LOC116904469 disks large homolog 5-like 6 136418486 136425420 - 116904469 MODEL JAAIVD010000024 pseudo 625956068 Cpap centrosome assembly and centriole elongation protein ENCODES a protein that exhibits gamma-tubulin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astral microtubule nucleation (ortholog); centriole assembly (ortholog); centriole elongation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); lissencephaly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 12 68274336 68327597 + 30032202 116913097 MODEL JAAIVD010000007;XM_032917229;XM_032917230;XR_004389595 XP_032773120;XP_032773121 Cenpj centromere protein J protein-coding 625956091 LOC116897661 U4 spliceosomal RNA 3 60666857 60666988 + 116897661 MODEL JAAIVD010000012 pseudo 625956092 Serpine3 serpin family E member 3 12 61724687 61746079 - 30032202 116913747 MODEL JAAIVD010000007;XM_032918055 XP_032773946 serpin E3 protein-coding 625956102 LOC116884508 protocadherin alpha-10 15 7370058 7373975 - 22301074 116884508 MODEL JAAIVD010000010;XM_032885636 XP_032741527 protein-coding 625956107 Smoc1 SPARC related modular calcium binding 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); eye development (ortholog); limb development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); microphthalmia with limb anomalies (ortholog); FOUND IN basement membrane (ortholog) 7 95251482 95446252 + 22301074;30032202 116905233 MODEL JAAIVD010000026;XM_032908057 XP_032763948 SPARC-related modular calcium-binding protein 1 protein-coding 625956122 Nmbr neuromedin B receptor ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of interleukin-6 production (ortholog); positive regulation of interferon-alpha production (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 222455981 222467747 - 22301074 116893003 MODEL JAAIVD010000001;XM_032894964 XP_032750855 neuromedin-B receptor protein-coding 625956129 Cdhr5 cadherin related family member 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN brush border assembly (ortholog); cell adhesion (ortholog); intermicrovillar adhesion (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 2 8201810 8210555 + 22301074;30032202 116890877 MODEL JAAIVD010000001;XM_032891462;XM_032891463 XP_032747353;XP_032747354 cadherin-related family member 5 protein-coding 625956151 Telo2 telomere maintenance 2 ENCODES a protein that exhibits Hsp90 protein binding (ortholog); molecular adaptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN protein stabilization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 2369955 2384733 - 30032202 116910462 MODEL JAAIVD010000002;XM_032914331 XP_032770222 telomere length regulation protein TEL2 homolog protein-coding 625956176 LOC116895210 60S ribosomal protein L32-like 3 6212953 6216791 - 116895210 MODEL JAAIVD010000012 pseudo 625956177 Adgrf3 adhesion G protein-coupled receptor F3 7 23828514 23840160 + 22301074 116905684 MODEL JAAIVD010000026;XM_032908667;XM_032908668 XP_032764558;XP_032764559 adhesion G-protein coupled receptor F3 protein-coding 625956198 Cabs1 calcium binding protein, spermatid associated 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); Inflammation (ortholog); FOUND IN acrosomal vesicle (ortholog); mitochondrial inner membrane (ortholog); motile cilium (ortholog) 11 995489 996704 - 22301074;30032202 116912848 MODEL JAAIVD010000006;XM_032917056 XP_032772947 calcium-binding and spermatid-specific protein 1 protein-coding 625956202 LOC116887640 corepressor interacting with RBPJ 1-like 1 224813435 224841553 + 116887640 MODEL JAAIVD010000025 pseudo 625956203 LOC116884172 proton myo-inositol cotransporter 1 264267423 264410620 - 22301074;30032202 116884172 MODEL JAAIVD010000025;XM_032885323 XP_032741214 protein-coding 625956214 LOC116887086 cysteine and glycine-rich protein 2-like 18 27295454 27296083 - 30032202 116887086 MODEL JAAIVD010000013;XM_032888594 XP_032744485 protein-coding 625956219 LOC116895023 small nucleolar RNA SNORA17 2 86709947 86710076 + 116895023 MODEL JAAIVD010000001;XR_004387209 snorna 625956222 LOC116888413 40S ribosomal protein S2-like X 29206124 29207034 - 116888413 MODEL JAAIVD010000014 pseudo 625956223 Ciz1 CDKN1A interacting zinc finger protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); positive regulation of DNA-templated DNA replication initiation (ortholog); random inactivation of X chromosome (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 23 (ortholog); Ewing sarcoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 5 3253173 3268811 - 22301074;30032202 116901150 MODEL JAAIVD010000023;XM_032902782;XM_032902783;XM_032902784;XM_032902785;XM_032902786;XM_032902787;XM_032902788;XM_032902789;XM_032902790 XP_032758673;XP_032758674;XP_032758675;XP_032758676;XP_032758677;XP_032758678;XP_032758679;XP_032758680;XP_032758681 cip1-interacting zinc finger protein protein-coding 625956265 LOC116903736 zinc finger protein 708-like 6 13038185 13068589 - 22301074;30032202 116903736 MODEL JAAIVD010000024;XM_032906421 XP_032762312 protein-coding 625956273 Tgm6 transglutaminase 6 ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autosomal dominant cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 5 70324131 70338428 - 22301074;30032202 116900891 MODEL JAAIVD010000023;XM_032902566 XP_032758457 protein-glutamine gamma-glutamyltransferase 6 protein-coding 625956285 Slc17a3 solute carrier family 17 member 3 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); toxin transmembrane transporter activity (ortholog); INVOLVED IN organic anion transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH gout (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) 14 42823018 42845390 + 22301074;30032202 116883647 MODEL JAAIVD010000009;XM_032884838;XM_032884839;XM_032884841 XP_032740729;XP_032740730;XP_032740732 sodium-dependent phosphate transport protein 4 protein-coding 625956307 KEG97_t14 tRNA-Lys MT 7686 7749 + 64988252 trna 625956308 Rnh1 ribonuclease/angiogenin inhibitor 1 ENCODES a protein that exhibits ribonuclease inhibitor activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of translation in response to stress (ortholog); regulation of angiogenesis (ortholog); ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); FOUND IN angiogenin-PRI complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 8301283 8314051 + 22301074;30032202 116890884 MODEL JAAIVD010000001;XM_032891490;XM_032891491;XM_032891494 XP_032747381;XP_032747382;XP_032747385 ribonuclease inhibitor protein-coding 625956328 LOC116897420 U6 spliceosomal RNA 3 167377229 167377331 - 116897420 MODEL JAAIVD010000012;XR_004387462 snrna 625956331 LOC116910634 U6 spliceosomal RNA 9 90800479 90800581 + 116910634 MODEL JAAIVD010000002;XR_004389172 snrna 625956334 LOC116892783 vomeronasal type-2 receptor 116-like 2 185421928 185435120 + 116892783 MODEL JAAIVD010000001 pseudo 625956335 LOC116887900 eukaryotic translation initiation factor 2 subunit 3-like X 52130662 52158426 + 116887900 MODEL JAAIVD010000014 pseudo 625956336 Gatad2a GATA zinc finger domain containing 2A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN anterior neuropore closure (ortholog); blood vessel development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Genetic Predisposition to Disease (ortholog); Neurodevelopmental Disorders (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); NuRD complex (ortholog) 13 12175479 12264776 - 30032202 116914292 MODEL JAAIVD010000008;XM_032918522;XM_032918523;XM_032918524;XM_032918525;XM_032918526;XM_032918527;XM_032918528;XM_032918529;XM_032918530;XM_032918531 XP_032774413;XP_032774414;XP_032774415;XP_032774416;XP_032774417;XP_032774418;XP_032774419;XP_032774420;XP_032774421;XP_032774422 transcriptional repressor p66-alpha protein-coding 625956382 Golga5 golgin A5 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi organization (ortholog); Golgi vesicle transport (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH Thyroid Neoplasms (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle membrane (ortholog); Golgi apparatus (ortholog) 7 113746590 113773874 + 22301074;30032202 116905357 MODEL JAAIVD010000026;XM_032908275 XP_032764166 golgin subfamily A member 5 protein-coding 625956399 Ywhag tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein gamma ENCODES a protein that exhibits identical protein binding (ortholog); insulin-like growth factor receptor binding (ortholog); phosphorylation-dependent protein binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; interleukin-3 signaling pathway; mTOR signaling pathway; ASSOCIATED WITH Constipation (ortholog); COVID-19 (ortholog); Creutzfeldt-Jakob disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 16 18086020 18113887 + 30032202 116885158 MODEL JAAIVD010000004;XM_032886363 XP_032742254 14-3-3 protein gamma protein-coding 625956405 LOC116903124 solute carrier organic anion transporter family member 1A1 6 7449501 7494162 - 22301074;30032202 116903124 MODEL JAAIVD010000024;XM_032905476 XP_032761367 protein-coding 625956421 Golph3 golgi phosphoprotein 3 ENCODES a protein that exhibits cargo adaptor activity (ortholog); enzyme binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN asymmetric Golgi ribbon formation (ortholog); cell adhesion molecule production (ortholog); cell migration (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 3 168740950 168768948 - 22301074;30032202 116897117 MODEL JAAIVD010000012;XM_032898762 XP_032754653 protein-coding 625956429 LOC116894651 c-Myc-binding protein-like 2 200687551 200687864 + 116894651 MODEL JAAIVD010000001 pseudo 625956430 LOC116887730 small nucleolar RNA SNORA17 18 10677613 10677743 + 116887730 MODEL JAAIVD010000013;XR_004386243 snorna 625956433 LOC116913236 armadillo-like helical domain-containing protein 4 12 73251372 73258764 - 116913236 MODEL JAAIVD010000007;XM_032917402 XP_032773293 protein-coding 625956439 LOC116893214 vomeronasal type-2 receptor 116-like 2 114182213 114217562 - 22301074;30032202 116893214 MODEL JAAIVD010000001;XM_032895099 XP_032750990 protein-coding 625956449 Hoxc13 homeobox C13 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); hair follicle development (ortholog); ASSOCIATED WITH BILATERAL CLEFT LIP (ortholog); ectodermal dysplasia 9 (ortholog); FOUND IN nucleus (ortholog) 1 260155350 260161503 - 22301074;30032202 116890191 MODEL JAAIVD010000025;XM_032890927 XP_032746818 homeobox protein Hox-C13 protein-coding 625956453 LOC116894174 olfactory receptor 2D2 2 105230823 105231770 - 22301074 116894174 MODEL JAAIVD010000001;XM_032895890 XP_032751781 protein-coding 625956456 Mobp myelin associated oligodendrocyte basic protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); nervous system development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); angiostrongyliasis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN mitochondrion (ortholog) 8 111373832 111391941 + 30032202 116907937 MODEL JAAIVD010000027;XM_032911154;XM_032911155 XP_032767045;XP_032767046 myelin-associated oligodendrocyte basic protein protein-coding 625956467 Ppp1r16a protein phosphatase 1 regulatory subunit 16A 1 249017178 249026677 + 22301074;30032202 116913361 MODEL JAAIVD010000025;XM_032917522 XP_032773413 protein-coding 625956486 Rnf128 ring finger protein 128 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH Laterality Defects, Autosomal Dominant (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) X 92408267 92416529 - 116888644 MODEL JAAIVD010000014;XM_032889935 XP_032745826 E3 ubiquitin-protein ligase RNF128 protein-coding 625956493 LOC116907173 olfactory receptor 8B3-like 8 32374843 32375799 - 22301074;30032202 116907173 MODEL JAAIVD010000027;XM_032910127 XP_032766018 protein-coding 625956497 LOC116912045 calcium-regulated heat stable protein 1-like 11 84818148 84862132 - 116912045 MODEL JAAIVD010000006 pseudo 625956498 LOC116904733 small nucleolar RNA SNORA17 6 2557349 2557475 - 116904733 MODEL JAAIVD010000024;XR_004388423 snorna 625956501 Dcun1d1 defective in cullin neddylation 1 domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 3 118046186 118084093 + 30032202 116896938 MODEL JAAIVD010000012;XM_032898505 XP_032754396 DCN1-like protein 1 protein-coding 625956512 LOC116902932 60S ribosomal protein L27-like 6 116007779 116008247 - 22301074;30032202 116902932 MODEL JAAIVD010000024;XM_032905258 XP_032761149 protein-coding 625956517 LOC116890485 small nucleolar RNA SNORA51 1 117939023 117939145 - 116890485 MODEL JAAIVD010000025 pseudo 625956518 Zc3hav1 zinc finger CCCH-type containing, antiviral 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); cellular response to virus (ortholog); negative regulation of viral genome replication (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 6 101477206 101524148 + 22301074 116903951 MODEL JAAIVD010000024;XM_032906737 XP_032762628 zinc finger CCCH-type antiviral protein 1 protein-coding 625956535 Ifngr1 interferon gamma receptor 1 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to virus (ortholog); PARTICIPATES IN type II interferon signaling pathway; ASSOCIATED WITH arteriosclerosis (ortholog); asthma (ortholog); Eczema (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 216963207 216981834 - 22301074 116892983 MODEL JAAIVD010000001;XM_032894939 XP_032750830 protein-coding 625956546 Eef1g eukaryotic translation elongation factor 1 gamma INVOLVED IN response to virus (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) 2 8967972 8978800 - 22301074;30032202 116890912 MODEL JAAIVD010000001;XM_032891540 XP_032747431 elongation factor 1-gamma protein-coding 625956560 LOC116887931 spindlin-1-like X 60673194 60673979 - 116887931 MODEL JAAIVD010000014 pseudo 625956561 Pip4k2a phosphatidylinositol-5-phosphate 4-kinase type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-phosphate 4-kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); autophagosome-lysosome fusion (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); lysosome (ortholog) 14 5028683 5193306 + 22301074 116883174 MODEL JAAIVD010000009;XM_032884211;XM_032884212 XP_032740102;XP_032740103 phosphatidylinositol 5-phosphate 4-kinase type-2 alpha protein-coding 625956578 Atp5mk ATP synthase membrane subunit k ASSOCIATED WITH mitochondrial complex V (ATP synthase) deficiency nuclear type 6 (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 2 46616680 46623159 - 116891263 MODEL JAAIVD010000001;XM_032892152 XP_032748043 Atp5md ATP synthase membrane subunit DAPIT;ATP synthase membrane subunit DAPIT, mitochondrial protein-coding 625956586 LOC116901024 magnesium transporter NIPA1-like 5 129530293 129531023 - 116901024 MODEL JAAIVD010000023 pseudo 625956587 LOC116883390 proteasome activator complex subunit 1-like 14 28766838 28767655 + 116883390 MODEL JAAIVD010000009 pseudo 625956588 Ca5a carbonic anhydrase 5A ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH CARBONIC ANHYDRASE VA DEFICIENCY, HYPERAMMONEMIA DUE TO (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 17 41560357 41589343 - 22301074;30032202 116886414 MODEL JAAIVD010000011;XM_032887890 XP_032743781 carbonic anhydrase 5A, mitochondrial protein-coding 625956599 LOC116886742 small nucleolar RNA SNORA17 17 38379331 38379468 + 116886742 MODEL JAAIVD010000011;XR_004386149 snorna 625956602 Slitrk1 SLIT and NTRK like family member 1 INVOLVED IN adult behavior (ortholog); axonogenesis (ortholog); endocytosis (ortholog); ASSOCIATED WITH Gilles de la Tourette syndrome (ortholog); trichotillomania (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 12 16215113 16219366 + 22301074;30032202 116913480 MODEL JAAIVD010000007;XM_032917682 XP_032773573 SLIT and NTRK-like protein 1 protein-coding 625956607 LOC116897943 olfactory receptor 5K3-like 4 43028408 43029334 + 22301074;30032202 116897943 MODEL JAAIVD010000003;XM_032899343 XP_032755234 protein-coding 625956610 Prkab2 protein kinase AMP-activated non-catalytic subunit beta 2 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); enzyme binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; FOUND IN apical plasma membrane (ortholog); cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog) 3 59635638 59651072 - 30032202 116896486 MODEL JAAIVD010000012;XM_032897652;XM_032897653;XM_032897654;XM_032897655;XM_032897656 XP_032753543;XP_032753544;XP_032753545;XP_032753546;XP_032753547 5'-AMP-activated protein kinase subunit beta-2 protein-coding 625956635 LOC116888018 triosephosphate isomerase-like X 80557070 80557889 + 116888018 MODEL JAAIVD010000014 pseudo 625956636 LOC116898081 olfactory receptor 183-like 4 70325868 70326792 - 116898081 MODEL JAAIVD010000003 pseudo 625956637 Crim1 cysteine rich transmembrane BMP regulator 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog) 7 14843524 15021163 - 22301074 116905906 MODEL JAAIVD010000026;XM_032908896 XP_032764787 cysteine-rich motor neuron 1 protein protein-coding 625956658 Ahcy adenosylhomocysteinase ENCODES a protein that exhibits adenosylhomocysteinase activity (ortholog); adenyl nucleotide binding (ortholog); copper ion binding (ortholog); INVOLVED IN chronic inflammatory response to antigenic stimulus (ortholog); circadian sleep/wake cycle (ortholog); response to hypoxia (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); amino acid metabolic disorder (ortholog); Animal Disease Models (ortholog); FOUND IN cytosol (ortholog) 5 134421563 134437117 - 30032202 116902169 MODEL JAAIVD010000023;XM_032904512 XP_032760403 protein-coding 625956672 LOC116884614 protocadherin beta-4-like 15 1019741 1025033 + 22301074 116884614 MODEL JAAIVD010000010;XM_032885754 XP_032741645 protein-coding 625956677 LOC116902765 60S ribosomal protein L6-like 6 69854377 69855282 + 116902765 MODEL JAAIVD010000024 pseudo 625956678 C17H16orf74 chromosome 17 C16orf74 homolog 17 40249493 40276018 - 116886101 MODEL JAAIVD010000011;XM_032887430 XP_032743321 uncharacterized protein C16orf74 homolog protein-coding 625956686 LOC116885253 fibrocystin-L-like 1 214453912 214508578 + 116885253 MODEL JAAIVD010000025;XM_032886525 XP_032742416 protein-coding 625956702 LOC116895966 fructose-bisphosphate aldolase A-like 3 147180450 147183217 - 116895966 MODEL JAAIVD010000012 pseudo 625956703 LOC116889017 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like X 101019202 101020167 - 116889017 MODEL JAAIVD010000014 pseudo 625956704 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92639851 92639922 + 116904828 MODEL JAAIVD010000024 trna 625956705 Slc2a6 solute carrier family 2 member 6 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); regulation of glycolytic process (ortholog); FOUND IN lysosomal membrane (ortholog) 5 9629633 9636242 + 22301074 116901246 MODEL JAAIVD010000023;XM_032902998;XM_032902999 XP_032758889;XP_032758890 solute carrier family 2, facilitated glucose transporter member 6 protein-coding 625956721 LOC116905413 zinc finger Ran-binding domain-containing protein 2-like 7 120436089 120438696 - 116905413 MODEL JAAIVD010000026;XR_004388524 pseudo 625956725 LOC116893767 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6-like 2 29964814 29966771 - 116893767 MODEL JAAIVD010000001 pseudo 625956726 Trappc2l trafficking protein particle complex subunit 2L ASSOCIATED WITH intellectual disability (ortholog); Progressive Early-Onset Encephalopathy with Episodic Rhabdomyolysis (ortholog); FOUND IN cytosol (ortholog); TRAPP complex (ortholog) 17 42239988 42243689 + 22301074;30032202 116886126 MODEL JAAIVD010000011;XM_032887465;XM_032887466 XP_032743356;XP_032743357 trafficking protein particle complex 2 like;trafficking protein particle complex subunit 2-like protein protein-coding 625956738 LOC116904360 sentrin-specific protease 6-like 6 82563432 82570133 + 116904360 MODEL JAAIVD010000024 pseudo 625956739 Atp6v0a1 ATPase H+ transporting V0 subunit a1 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of macroautophagy (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 104 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 60298879 60352961 + 22301074;30032202 116910185 MODEL JAAIVD010000002;XM_032914045;XM_032914046;XM_032914047;XM_032914048;XM_032914050;XM_032914051 XP_032769936;XP_032769937;XP_032769938;XP_032769939;XP_032769941;XP_032769942 V-type proton ATPase 116 kDa subunit a protein-coding 625956773 LOC116914960 G2/mitotic-specific cyclin-B2-like 13 13797228 13801861 - 116914960 MODEL JAAIVD010000008 pseudo 625956774 Pcsk2 proprotein convertase subtilisin/kexin type 2 ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN enkephalin processing (ortholog); insulin processing (ortholog); islet amyloid polypeptide processing (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH chronic kidney disease (ortholog); Endotoxemia (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN dendrite (ortholog); extracellular space (ortholog); membrane (ortholog) 5 123199035 123469328 + 22301074;30032202 116902035 MODEL JAAIVD010000023;XM_032904319 XP_032760210 neuroendocrine convertase 2 protein-coding 625956790 Mcrip2 MAPK regulated corepressor interacting protein 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA binding (ortholog); INVOLVED IN branched-chain amino acid metabolic process (ortholog); cold-induced thermogenesis (ortholog); fatty acid metabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 3129235 3134136 - 116909666 MODEL JAAIVD010000002;XM_032913319;XM_032913320;XR_004389089 XP_032769210;XP_032769211 protein-coding 625956805 LOC116900435 olfactory receptor 4C15-like 5 70699336 70700250 - 22301074 116900435 MODEL JAAIVD010000023;XM_032902176 XP_032758067 protein-coding 625956808 LOC116900061 uncharacterized LOC116900061 5 6450066 6451540 + 116900061 MODEL JAAIVD010000023;XR_004387912 ncrna 625956814 Tamalin trafficking regulator and scaffold protein tamalin ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of postsynaptic neurotransmitter receptor internalization (ortholog); signal transduction (ortholog); ASSOCIATED WITH schizophrenia (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 1 261858159 261866395 - 22301074;30032202 116883797 MODEL JAAIVD010000025;XM_032885045 XP_032740936 general receptor for phosphoinositides 1-associated scaffold protein protein-coding 625956826 LOC116890307 U4 spliceosomal RNA 1 107648438 107648578 + 116890307 MODEL JAAIVD010000025;XR_004386537 snrna 625956829 LOC116912156 tensin-2-like 11 77695900 77750232 - 116912156 MODEL JAAIVD010000006;XM_032916076;XM_032916077 XP_032771967;XP_032771968 protein-coding 625956840 Ranbp3l RAN binding protein 3 like ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN mesenchymal cell differentiation involved in bone development (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of myoblast differentiation (ortholog) 3 171521320 171568313 - 30032202 116896004 MODEL JAAIVD010000012;XM_032897028 XP_032752919 ran-binding protein 3-like protein-coding 625956861 LOC116898018 N-lysine methyltransferase KMT5A-like 4 76946263 76947418 - 116898018 MODEL JAAIVD010000003 pseudo 625956862 Ms4a10 membrane spanning 4-domains A10 2 10443930 10457059 - 30032202 116893639 MODEL JAAIVD010000001;XM_032895353 XP_032751244 membrane-spanning 4-domains subfamily A member 10 protein-coding 625956874 LOC116895118 small nucleolar RNA U3 2 36983355 36983511 + 116895118 MODEL JAAIVD010000001 pseudo 625956875 Polh DNA polymerase eta ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN cellular response to UV-C (ortholog); DNA synthesis involved in DNA repair (ortholog); postreplication repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); female breast cancer (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 4 83665490 83698030 + 22301074;30032202 116899120 MODEL JAAIVD010000003;XM_032900641;XM_032900642 XP_032756532;XP_032756533 protein-coding 625956893 LOC116900275 olfactory receptor 5AL1-like 5 63402979 63403920 - 22301074;30032202 116900275 MODEL JAAIVD010000023;XM_032902028 XP_032757919 protein-coding 625956896 LOC116904496 NEDD4-binding protein 1-like 6 156711193 156731276 + 116904496 MODEL JAAIVD010000024 pseudo 625956897 LOC116892588 macrophage migration inhibitory factor-like 2 172331305 172331739 + 116892588 MODEL JAAIVD010000001 pseudo 625956898 LOC116895410 60S ribosomal protein L9-like 3 61368998 61369807 - 116895410 MODEL JAAIVD010000012 pseudo 625956899 Ccni cyclin I 11 5984633 6007482 - 30032202 116912330 MODEL JAAIVD010000006;XM_032916374;XM_032916375 XP_032772265;XP_032772266 cyclin-I protein-coding 625956913 LOC116910695 small nucleolar RNA SNORA33 9 61528351 61528482 + 116910695 MODEL JAAIVD010000002;XR_004389223 snorna 625956916 LOC116897417 U6 spliceosomal RNA 3 17964686 17964792 + 116897417 MODEL JAAIVD010000012;XR_004387459 snrna 625956919 LOC116890289 mucin-2-like 1 24045833 24058118 + 116890289 MODEL JAAIVD010000025;XM_032891000 XP_032746891 protein-coding 625956929 LOC116909775 zinc finger protein 844-like 9 62153387 62170862 - 116909775 MODEL JAAIVD010000002;XM_032913466 XP_032769357 protein-coding 625956936 Rela RELA proto-oncogene, NF-kB subunit ENCODES a protein that exhibits actinin binding (ortholog); ankyrin repeat binding (ortholog); chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-1 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); adenocarcinoma (ortholog); alcohol dependence (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 2045437 2055534 - 22301074;30032202 116890708 MODEL JAAIVD010000001;XM_032891139;XM_032891140 XP_032747030;XP_032747031 transcription factor p65 protein-coding 625956953 LOC116904321 sperm motility kinase X-like 6 61138493 61161243 - 116904321 MODEL JAAIVD010000024 pseudo 625956954 Coro2a coronin 2A ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN brush border (ortholog); transcription repressor complex (ortholog) 1 99620177 99648850 - 30032202 116901917 MODEL JAAIVD010000025;XM_032904138 XP_032760029 coronin-2A protein-coding 625956969 Shc3 SHC adaptor protein 3 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); INVOLVED IN learning or memory (ortholog); synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH Ependymomas (ortholog) 14 69816284 69940946 - 22301074;30032202;9507002 116883303 MODEL AB001453;JAAIVD010000009;XM_032884350 BAA28175;XP_032740241 N-Shc SHC-transforming protein 3 protein-coding 625956985 Tspyl1 TSPY like 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); gonadal dysgenesis (ortholog); sudden infant death syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 18 36130050 36132601 - 22301074;30032202 116887167 MODEL JAAIVD010000013;XM_032888718 XP_032744609 testis-specific Y-encoded-like protein 1 protein-coding 625956990 LOC116896091 protein FAM98B-like 3 218379580 218396569 - 116896091 MODEL JAAIVD010000012 pseudo 625956991 LOC116883763 60S ribosomal protein L35a-like 14 393326 393736 - 22301074;30032202 116883763 MODEL JAAIVD010000009;XM_032885010 XP_032740901 protein-coding 625956996 Chst3 carbohydrate sulfotransferase 3 ENCODES a protein that exhibits chondroitin 6-sulfotransferase activity (ortholog); proteoglycan sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); peripheral nervous system axon regeneration (ortholog); response to axon injury (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Larsen syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) 18 26003800 26036940 - 22301074;30032202 116887119 MODEL JAAIVD010000013;XM_032888666 XP_032744557 protein-coding 625957003 LOC116914174 U6 spliceosomal RNA 12 83863835 83863940 - 116914174 MODEL JAAIVD010000007;XR_004389718 snrna 625957006 Rabl2b RAB, member of RAS oncogene family like 2B ENCODES a protein that exhibits G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); intraciliary transport (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 1 258888625 258897290 - 22301074;30032202 116915216 MODEL JAAIVD010000025;XM_032919601;XM_032919610;XM_032919617 XP_032775492;XP_032775501;XP_032775508 rab-like protein 2B protein-coding 625957023 Nek11 NIMA related kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); protein phosphorylation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 8 96453840 96687076 - 22301074;30032202 116907449 MODEL JAAIVD010000027;XM_032910420 XP_032766311 serine/threonine-protein kinase Nek11 protein-coding 625957045 Sdha succinate dehydrogenase complex flavoprotein subunit A ENCODES a protein that exhibits succinate dehydrogenase (quinone) activity (ortholog); INVOLVED IN nervous system development (ortholog); respiratory electron transport chain (ortholog); succinate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; electron transport chain pathway; fumaric aciduria pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with hypodiploidy (ortholog); Brain Neoplasms (ortholog); Breast Cancer, Familial (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 2 203749670 203772776 - 22301074;30032202 116892915 MODEL JAAIVD010000001;XM_032894841 XP_032750732 succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial protein-coding 625957063 LOC116890499 small nucleolar RNA SNORA48 1 108968820 108968961 - 116890499 MODEL JAAIVD010000025;XR_004386685 snorna 625957066 Riox1 ribosomal oxygenase 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K4me/H3K4me2/H3K4me3 demethylase activity (ortholog); INVOLVED IN negative regulation of DNA repair (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of osteoblast differentiation (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 7 98035128 98037746 + 30032202 116905256 MODEL JAAIVD010000026;XM_032908109 XP_032764000 protein-coding 625957071 LOC116887889 eukaryotic translation initiation factor 4B-like X 50239423 50241024 + 116887889 MODEL JAAIVD010000014 pseudo 625957072 Trim8 tripartite motif containing 8 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH electroclinical syndrome (ortholog); epilepsy (ortholog); Focal Segmental Glomerulosclerosis and Neurodevelopmental Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 45969119 45983898 + 116891251 MODEL JAAIVD010000001;XM_032892131 XP_032748022 E3 ubiquitin-protein ligase TRIM8 protein-coding 625957082 LOC116894784 aldehyde dehydrogenase family 3 member B3 2 3681527 3689994 - 22301074;30032202 116894784 MODEL JAAIVD010000001;XM_032896435 XP_032752326 protein-coding 625957096 LOC116906437 small nucleolar RNA SNORA17 7 78470347 78470478 + 116906437 MODEL JAAIVD010000026;XR_004388697 snorna 625957099 LOC116906599 uncharacterized LOC116906599 8 36280792 36336680 - 116906599 MODEL JAAIVD010000027;XR_004388754 ncrna 625957105 LOC116887988 galectin-8-like X 72424135 72431500 - 22301074 116887988 MODEL JAAIVD010000014;XM_032889421 XP_032745312 protein-coding 625957110 LOC116907132 40S ribosomal protein S6-like 8 21211578 21212315 - 116907132 MODEL JAAIVD010000027 pseudo 625957111 LOC116905216 uncharacterized LOC116905216 7 59051430 59057452 + 116905216 MODEL JAAIVD010000026;XR_004388500 ncrna 625957116 Mmp15 matrix metallopeptidase 15 INVOLVED IN endodermal cell differentiation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Mammary Neoplasms (ortholog) 17 2209986 2231381 + 22301074;30032202 116886320 MODEL JAAIVD010000011;XM_032887764 XP_032743655 matrix metalloproteinase-15 protein-coding 625957130 Adam32 ADAM metallopeptidase domain 32 FOUND IN cell surface (ortholog) 13 61526786 61626644 + 22301074;30032202 116914641 MODEL JAAIVD010000008;XM_032919035 XP_032774926 disintegrin and metalloproteinase domain-containing protein 32 protein-coding 625957156 Irf8 interferon regulatory factor 8 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Behcet's disease (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 40378861 40400439 + 22301074;30032202 116886350 MODEL JAAIVD010000011;XM_032887801 XP_032743692 protein-coding 625957169 Plaat5 phospholipase A and acyltransferase 5 ENCODES a protein that exhibits N-acyltransferase activity (ortholog); phospholipase A1 activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog) 2 131924 142693 - 30032202 116894776 MODEL JAAIVD010000001;XM_032896430 XP_032752321 protein-coding 625957176 LOC116883517 histone H2A type 1-B 14 41930839 41931607 + 22301074;30032202 116883517 MODEL JAAIVD010000009;XM_032884689;XM_032884690 XP_032740580;XP_032740581 protein-coding 625957183 Pkd1l2 polycystin-1-like protein 2 ASSOCIATED WITH long QT syndrome (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); otosclerosis 4 (ortholog) 17 36643695 36736934 - 22301074;30032202 116886169 MODEL JAAIVD010000011;XM_032887540 XP_032743431 polycystic kidney disease protein 1-like 2;polycystin 1 like 2 protein-coding 625957230 LOC116909211 histone deacetylase 1-like 9 7507359 7566943 + 116909211 MODEL JAAIVD010000002 pseudo 625957231 LOC116911038 olfactory receptor 6C1-like 1 161843206 161843796 - 116911038 MODEL JAAIVD010000025 pseudo 625957232 LOC116893802 acyl-CoA desaturase 2-like 2 43768088 43781325 + 116893802 MODEL JAAIVD010000001 pseudo 625957233 LOC116908256 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 8 94971642 95063329 + 116908256 MODEL JAAIVD010000027 pseudo 625957234 LOC116901541 tetratricopeptide repeat protein 30A1 5 53333186 53336034 - 22301074;30032202 116901541 MODEL JAAIVD010000023;XM_032903525 XP_032759416 protein-coding 625957239 Fndc11 fibronectin type III domain containing 11 5 158317023 158319425 + 22301074 116900800 MODEL JAAIVD010000023;XM_032902512 XP_032758403 fibronectin type III domain-containing protein 11 protein-coding 625957245 Mccc2 methylcrotonyl-CoA carboxylase subunit 2 ENCODES a protein that exhibits methylcrotonoyl-CoA carboxylase activity (ortholog); INVOLVED IN coenzyme A metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylcrotonyl-CoA carboxylase 2 deficiency (ortholog); 3-methylcrotonyl-CoA carboxylase deficiency (ortholog); autism spectrum disorder (ortholog); FOUND IN methylcrotonoyl-CoA carboxylase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 196590311 196657303 + 30032202 116897246 MODEL JAAIVD010000012;XM_032898975;XM_032898976 XP_032754866;XP_032754867 methylcrotonoyl-CoA carboxylase 2;methylcrotonoyl-CoA carboxylase beta chain, mitochondrial protein-coding 625957267 LOC116904515 60S ribosomal protein L35a-like 6 6845304 6845635 - 116904515 MODEL JAAIVD010000024 pseudo 625957268 Gramd1c GRAM domain containing 1C ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog); plasma membrane (ortholog) 4 28873074 28974812 - 30032202 116898301 MODEL JAAIVD010000003;XM_032899647 XP_032755538 protein Aster-C protein-coding 625957291 Mxd3 MAX dimerization protein 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 14 73649998 73653973 - 22301074;30032202 116883467 MODEL JAAIVD010000009;XM_032884620 XP_032740511 protein-coding 625957301 Trib1 tribbles pseudokinase 1 ENCODES a protein that exhibits mitogen-activated protein kinase kinase binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Hypertriglyceridemia (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 234161260 234169234 + 22301074;30032202 116912020 MODEL JAAIVD010000025;XM_032915911 XP_032771802 tribbles homolog 1 protein-coding 625957308 LOC116888111 L-lactate dehydrogenase A chain-like X 100808072 100809098 - 116888111 MODEL JAAIVD010000014 pseudo 625957309 Ces3 carboxylesterase 3 ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog) 17 24843043 24851495 + 116886560 MODEL JAAIVD010000011;XM_032888078 XP_032743969 protein-coding 625957326 LOC116902624 U1 spliceosomal RNA 5 100492937 100493083 - 116902624 MODEL JAAIVD010000023 pseudo 625957327 LOC116898168 60S ribosomal protein L23-like 4 123996960 123997383 + 116898168 MODEL JAAIVD010000003 pseudo 625957328 Mybphl myosin binding protein H like INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Hydrops Fetalis (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN myofilament (ortholog) 3 49877211 49892200 - 22301074 116896363 MODEL JAAIVD010000012;XM_032897475 XP_032753366 myosin-binding protein H-like protein-coding 625957341 LOC116888640 testin-like X 92436891 92438111 - 116888640 MODEL JAAIVD010000014 pseudo 625957342 Tuba4a tubulin alpha 4a ENCODES a protein that exhibits enzyme binding (ortholog); protein kinase binding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); amyotrophic lateral sclerosis type 22 (ortholog); FOUND IN cilium (ortholog); cytoskeleton (ortholog); microtubule (ortholog) 4 148572269 148576630 - 22301074;30032202 116899525 MODEL JAAIVD010000003;XM_032901392 XP_032757283 tubulin alpha-4A chain protein-coding 625957350 Dmtf1 cyclin D binding myb like transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 140954628 140995015 - 30032202 116904147 MODEL JAAIVD010000024;XM_032907043;XM_032907044 XP_032762934;XP_032762935 cyclin-D-binding Myb-like transcription factor 1 protein-coding 625957375 Prcc proline rich mitotic checkpoint control factor INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH papillary renal cell carcinoma (ortholog); renal cell carcinoma (ortholog); Renal Cell Carcinoma 1 (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 3 65672619 65697824 + 30032202 116896713 MODEL JAAIVD010000012;XM_032898132 XP_032754023 proline-rich protein PRCC protein-coding 625957386 Bod1 biorientation of chromosomes in cell division 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic sister chromatid biorientation (ortholog); mitotic sister chromatid cohesion, centromeric (ortholog); FOUND IN centrosome (ortholog); outer kinetochore (ortholog); Set1C/COMPASS complex (ortholog) 9 4276964 4283260 + 116909690 MODEL JAAIVD010000002;XM_032913352 XP_032769243 biorientation of chromosomes in cell division protein 1 protein-coding 625957394 Tacc3 transforming acidic coiled-coil containing protein 3 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); transitional cell carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 11 71167245 71182474 - 30032202 116912344 MODEL JAAIVD010000006;XM_032916393;XM_032916394 XP_032772284;XP_032772285 transforming acidic coiled-coil-containing protein 3 protein-coding 625957418 LOC116888196 RNA polymerase II elongation factor ELL2-like X 125924975 125934360 - 22301074;30032202 116888196 MODEL JAAIVD010000014;XM_032889503 XP_032745394 protein-coding 625957423 Fcamr Fc alpha and mu receptor ENCODES a protein that exhibits IgA binding (ortholog); IgM binding (ortholog); transmembrane signaling receptor activity (ortholog) 10 4992935 5001902 - 30032202 116911520 MODEL JAAIVD010000005;XM_032915513 XP_032771404 Fc fragment of IgA and IgM receptor;high affinity immunoglobulin alpha and immunoglobulin mu Fc receptor protein-coding 625957432 Lrrc7 leucine rich repeat containing 7 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); response to toluene (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); intellectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); axon initial segment (ortholog); centrosome (ortholog) 3 3045939 3499257 + 22301074;30032202 116896122 MODEL JAAIVD010000012;XM_032897087;XM_032897088;XM_032897089;XM_032897090;XM_032897091;XM_032897092;XM_032897093;XM_032897094;XM_032897096;XM_032897097;XM_032897098 XP_032752978;XP_032752979;XP_032752980;XP_032752981;XP_032752982;XP_032752983;XP_032752984;XP_032752985;XP_032752987;XP_032752988;XP_032752989 leucine-rich repeat-containing protein 7 protein-coding 625957491 LOC116913905 elongation factor 1-gamma-like 12 26131191 26177412 - 116913905 MODEL JAAIVD010000007 pseudo 625957492 LOC116900818 ADP-ribosylation factor 4-like 5 37840916 37841450 - 116900818 MODEL JAAIVD010000023 pseudo 625957493 Aopep aminopeptidase O (putative) ASSOCIATED WITH atrial fibrillation (ortholog); dystonia 31 (ortholog); Fanconi anemia (ortholog); FOUND IN nucleolus (ortholog) 14 76233649 76540744 - 22301074;30032202 116883284 MODEL JAAIVD010000009;XM_032884275;XM_032884276;XM_032884277 XP_032740166;XP_032740167;XP_032740168 aminopeptidase O protein-coding 625957521 Mageh1 MAGE family member H1 X 18269974 18271445 - 30032202 116889094 MODEL JAAIVD010000014;XM_032890264 XP_032746155 melanoma-associated antigen H1 protein-coding 625957526 LOC116900417 olfactory receptor 4P4-like 5 70404773 70405699 - 22301074 116900417 MODEL JAAIVD010000023;XM_032902161 XP_032758052 protein-coding 625957529 Gdpgp1 GDP-D-glucose phosphorylase 1 ENCODES a protein that exhibits GDP-D-glucose phosphorylase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); response to stress (ortholog) 2 120011494 120019260 - 30032202 116891927 MODEL JAAIVD010000001;XM_032893361;XM_032893362;XM_032893363 XP_032749252;XP_032749253;XP_032749254 protein-coding 625957541 LOC116909120 ATP-binding cassette sub-family A member 17 9 1554745 1634090 - 22301074;30032202 116909120 MODEL JAAIVD010000002;XM_032912596 XP_032768487 protein-coding 625957574 LOC116894095 olfactory receptor 52K1-like 2 103317717 103318643 + 22301074 116894095 MODEL JAAIVD010000001;XM_032895814 XP_032751705 protein-coding 625957577 LOC116896077 glyceraldehyde-3-phosphate dehydrogenase-like 3 213779812 213780222 - 22301074;30032202 116896077 MODEL JAAIVD010000012;XM_032897058 XP_032752949 protein-coding 625957580 Susd5 sushi domain containing 5 INVOLVED IN Notch signaling pathway (ortholog) 8 104922014 104958850 + 22301074;30032202 116907810 MODEL JAAIVD010000027;XM_032910988 XP_032766879 sushi domain-containing protein 5 protein-coding 625957589 LOC116911622 L-lactate dehydrogenase A chain-like 10 6825326 6826605 - 22301074 116911622 MODEL JAAIVD010000005;XM_032915590 XP_032771481 protein-coding 625957594 LOC116909109 uncharacterized LOC116909109 9 81882950 81884310 + 116909109 MODEL JAAIVD010000002;XR_004389050 ncrna 625957598 Abhd8 abhydrolase domain containing 8 INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog) 13 13523600 13530307 + 22301074 116915097 MODEL JAAIVD010000008;XM_032919525 XP_032775416 protein ABHD8 protein-coding 625957607 Mos MOS proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MRF binding (ortholog); protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to nerve growth factor stimulus (ortholog); chromatin organization (ortholog); ASSOCIATED WITH Female Infertility (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 20 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 7 72855401 72857378 + 22301074;30032202 116905720 MODEL JAAIVD010000026;XM_032908689 XP_032764580 proto-oncogene serine/threonine-protein kinase mos protein-coding 625957612 Zbtb39 zinc finger and BTB domain containing 39 1 206187189 206194810 + 22301074;30032202 116910239 MODEL JAAIVD010000025;XM_032914130;XM_032914138 XP_032770021;XP_032770029 zinc finger and BTB domain-containing protein 39 protein-coding 625957621 LOC116893154 tubulin alpha-1B chain-like 2 100970045 100971451 - 116893154 MODEL JAAIVD010000001 pseudo 625957622 LOC116914430 60S ribosomal protein L34-like 13 6800424 6800851 + 22301074;30032202 116914430 MODEL JAAIVD010000008;XM_032918727 XP_032774618 protein-coding 625957627 Slc9a6 solute carrier family 9 member A6 ENCODES a protein that exhibits identical protein binding (ortholog); potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN axon extension (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); dendrite extension (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH astigmatism (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Christianson syndrome (ortholog); FOUND IN axon terminus (ortholog); axonal spine (ortholog); cytoplasmic vesicle (ortholog) X 116540812 116597768 - 22301074;30032202 116888295 MODEL JAAIVD010000014;XM_032889568;XM_032889569 XP_032745459;XP_032745460 sodium/hydrogen exchanger 6 protein-coding 625957651 LOC116900386 olfactory receptor 5D18-like 5 69689250 69690230 - 22301074;30032202 116900386 MODEL JAAIVD010000023;XM_032902133 XP_032758024 protein-coding 625957654 Tspan3 tetraspanin 3 ASSOCIATED WITH colorectal cancer (ortholog) 8 50061341 50085072 - 22301074;30032202 116906693 MODEL JAAIVD010000027;XM_032909484 XP_032765375 tetraspanin-3 protein-coding 625957665 Bnip5 BCL2 interacting protein 5 ASSOCIATED WITH prostate cancer (ortholog) 18 4948577 4965377 + 116887351 MODEL JAAIVD010000013;XM_032888945 XP_032744836 protein BNIP5 protein-coding 625957681 LOC116910099 probable E3 ubiquitin-protein ligase MARCH10 9 73639717 73691181 + 116910099 MODEL JAAIVD010000002;XM_032913926 XP_032769817 protein-coding 625957691 LOC116883533 uncharacterized LOC116883533 14 67513439 67517114 + 116883533 MODEL JAAIVD010000009;XR_004385769 ncrna 625957695 Pafah1b1 platelet activating factor acetylhydrolase 1b regulatory subunit 1 ENCODES a protein that exhibits dynein complex binding (ortholog); dynein intermediate chain binding (ortholog); identical protein binding (ortholog); INVOLVED IN acrosome assembly (ortholog); actin cytoskeleton organization (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); Carcinogenesis (ortholog); Classical Lissencephalies and Subcortical Band Heterotopias (ortholog); FOUND IN 1-alkyl-2-acetylglycerophosphocholine esterase complex (ortholog); astral microtubule (ortholog); axon (ortholog) 9 93406083 93464249 - 22301074 116909702 MODEL JAAIVD010000002;XM_032913370;XM_032913371;XM_032913372 XP_032769261;XP_032769262;XP_032769263 platelet-activating factor acetylhydrolase IB subunit alpha protein-coding 625957716 Eif2s3 eukaryotic translation initiation factor 2 subunit gamma ENCODES a protein that exhibits translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); MEHMO syndrome (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) X 52101578 52124302 - 22301074;30032202 116888424 MODEL JAAIVD010000014;XM_032889694 XP_032745585 eukaryotic translation initiation factor 2 subunit 3 protein-coding 625957732 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60800646 60800717 + 116897686 MODEL JAAIVD010000012 trna 625957733 Olfml3 olfactomedin like 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); prostate cancer (ortholog) 3 54333898 54336717 + 30032202 116896445 MODEL JAAIVD010000012;XM_032897598 XP_032753489 olfactomedin-like protein 3 protein-coding 625957740 LOC116899911 small nucleolar RNA U13 4 158675554 158675658 - 116899911 MODEL JAAIVD010000003;XR_004387883 snorna 625957743 LOC116899485 uncharacterized LOC116899485 1 50564508 50971618 - 116899485 MODEL JAAIVD010000025;XR_004387730 ncrna 625957748 LOC116894832 U6 spliceosomal RNA 2 164626711 164626817 - 116894832 MODEL JAAIVD010000001;XR_004387047 snrna 625957751 Clnk cytokine dependent hematopoietic cell linker ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); mast cell degranulation (ortholog); ASSOCIATED WITH vitiligo (ortholog); FOUND IN cytoplasm (ortholog); mast cell granule (ortholog); protein-containing complex (ortholog) 11 66329379 66499355 + 30032202 116912382 MODEL JAAIVD010000006;XM_032916441 XP_032772332 cytokine-dependent hematopoietic cell linker protein-coding 625957773 Rdh5 retinol dehydrogenase 5 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); androsterone dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN retinoid metabolic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); fundus albipunctatus (ortholog); myopia (ortholog); FOUND IN cell body (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 1 156390476 156396016 - 116906601 MODEL JAAIVD010000025;XM_032909352;XM_032909359;XM_032909368 XP_032765243;XP_032765250;XP_032765259 protein-coding 625957787 LOC116894223 trace amine-associated receptor 8a 2 106797455 106798578 - 22301074;30032202 116894223 MODEL JAAIVD010000001;XM_032895934 XP_032751825 protein-coding 625957791 Chrd chordin ENCODES a protein that exhibits BMP binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); BMP signaling pathway (ortholog); cell population proliferation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH DiGeorge syndrome (ortholog); syndromic microphthalmia 5 (ortholog); velocardiofacial syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) 4 5555458 5565071 + 22301074 116898705 MODEL JAAIVD010000003;XM_032899982;XM_032899983;XM_032899984;XM_032899985;XM_032899986;XM_032899987;XM_032899988;XM_032899990 XP_032755873;XP_032755874;XP_032755875;XP_032755876;XP_032755877;XP_032755878;XP_032755879;XP_032755881 protein-coding 625957834 LOC116903935 uncharacterized protein C8orf34 homolog 1 146466377 146506908 + 116903935 MODEL JAAIVD010000025;XM_032906716 XP_032762607 protein-coding 625957841 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48067438 48067510 - 116910831 MODEL JAAIVD010000002 trna 625957842 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 18 10536384 10536455 + 116887795 MODEL JAAIVD010000013 trna 625957843 Sap25 Sin3A associated protein 25 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 16 16382936 16384670 - 22301074;30032202 116885470 MODEL JAAIVD010000004;XM_032886751 XP_032742642 histone deacetylase complex subunit SAP25 protein-coding 625957851 Cebpz CCAAT enhancer binding protein zeta ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 14296383 14313314 + 30032202 116905895 MODEL JAAIVD010000026;XM_032908884 XP_032764775 CCAAT/enhancer-binding protein zeta protein-coding 625957871 LOC116899890 small nucleolar RNA SNORA17 4 137023429 137023517 + 116899890 MODEL JAAIVD010000003 pseudo 625957872 Ndufs5 NADH:ubiquinone oxidoreductase subunit S5 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 34563380 34568949 + 30032202 116896974 MODEL JAAIVD010000025;XM_032898558;XM_032898567;XM_032898576 XP_032754449;XP_032754458;XP_032754467 NADH dehydrogenase [ubiquinone] iron-sulfur protein 5 protein-coding 625957885 LOC116889374 high mobility group protein B4-like X 82603287 82603793 + 30032202 116889374 MODEL JAAIVD010000014;XM_032890476 XP_032746367 protein-coding 625957888 Dppa5 developmental pluripotency associated 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytoplasm (ortholog) 8 72541709 72542767 - 30032202 116908121 MODEL JAAIVD010000027;XM_032911412 XP_032767303 developmental pluripotency-associated 5 protein protein-coding 625957895 Nudt12 nudix hydrolase 12 ENCODES a protein that exhibits magnesium ion binding (ortholog); NAD+ diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); mRNA catabolic process (ortholog); mRNA methylguanosine-cap decapping (ortholog); PARTICIPATES IN niacin metabolic pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); peroxisome (ortholog) 4 169158155 169171058 - 22301074;30032202 116899687 MODEL JAAIVD010000003;XM_032901710 XP_032757601 peroxisomal NADH pyrophosphatase NUDT12 protein-coding 625957906 LOC116906957 peflin-like 1 157840029 157841643 - 116906957 MODEL JAAIVD010000025 pseudo 625957907 Rps6 ribosomal protein S6 ENCODES a protein that exhibits mRNA binding (ortholog); protein kinase binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); cellular response to ethanol (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Experimental Autoimmune Myocarditis (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 1 67163112 67166026 + 22301074;30032202 116900471 MODEL JAAIVD010000025;XM_032902210 XP_032758101 40S ribosomal protein S6 protein-coding 625957916 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 37555043 37555127 + 116897663 MODEL JAAIVD010000012 trna 625957917 LOC116914159 U2 spliceosomal RNA 12 33267569 33267712 - 116914159 MODEL JAAIVD010000007 pseudo 625957918 LOC116914859 proteasome subunit alpha type-5-like 13 40238113 40238682 - 116914859 MODEL JAAIVD010000008 pseudo 625957919 Cpeb4 cytoplasmic polyadenylation element binding protein 4 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to decreased oxygen levels (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH liver cirrhosis (ortholog); portal hypertension (ortholog); primary biliary cholangitis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 9 4000613 4063221 - 30032202 116909206 MODEL JAAIVD010000002;XM_032912702;XM_032912703;XM_032912704;XM_032912705 XP_032768593;XP_032768594;XP_032768595;XP_032768596 cytoplasmic polyadenylation element-binding protein 4 protein-coding 625957936 LOC116885002 H/ACA ribonucleoprotein complex subunit 2-like 15 78676389 78676834 + 116885002 MODEL JAAIVD010000010 pseudo 625957937 Nbas NBAS subunit of NRZ tethering complex ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Disease Progression (ortholog); fundus dystrophy (ortholog); FOUND IN Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 7 33214134 33582027 + 22301074;30032202 116904887 MODEL JAAIVD010000026;XM_032907488 XP_032763379 neuroblastoma-amplified sequence protein-coding 625957994 LOC116909314 tropomyosin alpha-1 chain-like 9 22772425 22773242 - 116909314 MODEL JAAIVD010000002 pseudo 625957995 LOC116883356 histone H2B type 1-K 14 41649808 41650248 - 22301074;30032202 116883356 MODEL JAAIVD010000009;XM_032884435 XP_032740326 protein-coding 625958000 Cep97 centrosomal protein 97 INVOLVED IN negative regulation of cilium assembly (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); protein-containing complex (ortholog) 4 40043609 40071007 - 22301074 116898896 MODEL JAAIVD010000003;XM_032900293;XM_032900294 XP_032756184;XP_032756185 centrosomal protein of 97 kDa protein-coding 625958020 LOC116905493 uncharacterized LOC116905493 1 154902218 154903861 + 116905493 MODEL JAAIVD010000025;XR_004388545 ncrna 625958024 Gjb4 gap junction protein beta 4 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); olfactory behavior (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3A (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); epidermolytic hyperkeratosis (ortholog); FOUND IN cell junction (ortholog); connexin complex (ortholog); nucleolus (ortholog) 1 30929631 30931470 + 22301074;30032202 116886958 MODEL JAAIVD010000025;XM_032888456 XP_032744347 gap junction beta-4 protein protein-coding 625958029 LOC116906317 U6 spliceosomal RNA 7 41833429 41833535 - 116906317 MODEL JAAIVD010000026;XR_004388605 snrna 625958032 LOC116899859 U1 spliceosomal RNA 4 158055823 158055990 + 116899859 MODEL JAAIVD010000003;XR_004387854 snrna 625958035 LOC116913348 uncharacterized LOC116913348 12 56183034 56184830 - 116913348 MODEL JAAIVD010000007;XR_004389610 ncrna 625958040 B3gnt7 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7 ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog) 4 158448051 158452037 + 22301074;30032202 116899588 MODEL JAAIVD010000003;XM_032901529 XP_032757420 protein-coding 625958046 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 57720357 57720429 - 116914208 MODEL JAAIVD010000007 trna 625958047 Pdia5 protein disulfide isomerase family A member 5 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 4 20184542 20270188 - 22301074;30032202 116898808 MODEL JAAIVD010000003;XM_032900160 XP_032756051 protein disulfide-isomerase A5 protein-coding 625958068 Pnpla3 patatin like domain 3, 1-acylglycerol-3-phosphate O-acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); long-chain fatty acyl-CoA binding (ortholog); INVOLVED IN cellular response to 3,3',5-triiodo-L-thyronine (ortholog); cellular response to insulin stimulus (ortholog); glycerophospholipid metabolic process (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); Alcoholic Liver Diseases (ortholog); coronary artery disease (ortholog); FOUND IN lipid droplet (ortholog); membrane (ortholog) 1 253556033 253575213 + 22301074;30032202 116914506 MODEL JAAIVD010000025;XM_032918833;XM_032918841 XP_032774724;XP_032774732 1-acylglycerol-3-phosphate O-acyltransferase PNPLA3;patatin like phospholipase domain containing 3 protein-coding 625958083 LOC116893946 PDZ domain-containing protein 11-like 2 93076454 93076870 - 116893946 MODEL JAAIVD010000001 pseudo 625958084 Hdx highly divergent homeobox X 67716381 67767821 + 22301074 116887975 MODEL JAAIVD010000014;XM_032889414 XP_032745305 protein-coding 625958092 LOC116888267 uncharacterized LOC116888267 X 66032722 66034976 - 116888267 MODEL JAAIVD010000014;XR_004386295 ncrna 625958096 LOC116896196 guanylate-binding protein 4 3 18244645 18257079 - 22301074;30032202 116896196 MODEL JAAIVD010000012;XM_032897243 XP_032753134 protein-coding 625958110 Elfn1 extracellular leucine rich repeat and fibronectin type III domain containing 1 INVOLVED IN chemical synaptic transmission (ortholog); establishment of protein localization (ortholog); synapse assembly (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); excitatory synapse (ortholog) 16 13216438 13219195 - 22301074;30032202 116885757 MODEL JAAIVD010000004;XM_032887073 XP_032742964 protein ELFN1 protein-coding 625958115 Mfsd11 major facilitator superfamily domain containing 11 INVOLVED IN response to food (ortholog); response to starvation (ortholog) 9 67208972 67227945 - 116910057 MODEL JAAIVD010000002;XM_032913863 XP_032769754 UNC93-like protein MFSD11 protein-coding 625958133 Sdhaf3 succinate dehydrogenase complex assembly factor 3 FOUND IN mitochondrion (ortholog) 6 131471059 131520945 + 30032202 116904088 MODEL JAAIVD010000024;XM_032906959 XP_032762850 succinate dehydrogenase assembly factor 3, mitochondrial protein-coding 625958139 Hspb9 heat shock protein family B (small) member 9 ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 60006009 60006798 + 30032202 116908963 MODEL JAAIVD010000002;XM_032912424 XP_032768315 heat shock protein beta-9 protein-coding 625958143 LOC116894858 U6 spliceosomal RNA 2 213692070 213692173 - 116894858 MODEL JAAIVD010000001;XR_004387072 snrna 625958146 LOC116896964 uncharacterized LOC116896964 3 122466523 122475125 - 116896964 MODEL JAAIVD010000012;XR_004387388 ncrna 625958151 Ca4 carbonic anhydrase 4 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); response to steroid hormone (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 9 85738872 85754006 - 22301074;30032202 116909266 MODEL JAAIVD010000002;XM_032912792;XM_032912793 XP_032768683;XP_032768684 protein-coding 625958166 Gins4 GINS complex subunit 4 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) 13 63189283 63200870 + 22301074;30032202 116914842 MODEL JAAIVD010000008;XM_032919296 XP_032775187 DNA replication complex GINS protein SLD5 protein-coding 625958178 LOC116884374 broad substrate specificity ATP-binding cassette transporter ABCG2-like 15 46219703 46220914 - 116884374 MODEL JAAIVD010000010 pseudo 625958179 Ankrd6 ankyrin repeat domain 6 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of Wnt signaling pathway, planar cell polarity pathway (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 110087503 110230079 + 22301074;30032202 116902350 MODEL JAAIVD010000025;XM_032904838;XM_032904846 XP_032760729;XP_032760737 ankyrin repeat domain-containing protein 6 protein-coding 625958204 LOC116907088 protein FAM162A-like 8 79854595 79855110 + 116907088 MODEL JAAIVD010000027 pseudo 625958205 LOC116912923 uncharacterized LOC116912923 1 248451373 248457984 - 22301074 116912923 MODEL JAAIVD010000025;XM_032917178 XP_032773069 uncharacterized protein LOC116912923 protein-coding 625958224 LOC116908414 small nucleolar RNA SNORA17 8 95796078 95796194 - 116908414 MODEL JAAIVD010000027 pseudo 625958225 LOC116886863 olfactory receptor 11A1 18 10175166 10176107 + 22301074 116886863 MODEL JAAIVD010000013;XM_032888318 XP_032744209 protein-coding 625958228 LOC116907524 cytochrome b561 domain-containing protein 2 ENCODES a protein that exhibits heme binding (ortholog); transmembrane ascorbate ferrireductase activity (ortholog); transmembrane monodehydroascorbate reductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); vesicle (ortholog) 8 98855719 98858277 - 30032202 116907524 MODEL JAAIVD010000027;XM_032910534;XM_032910535;XM_032910536 XP_032766425;XP_032766426;XP_032766427 protein-coding 625958241 Rhbdl1 rhomboid like 1 9 3099986 3104095 - 22301074;30032202 116908549 MODEL JAAIVD010000002;XM_032911749;XM_032911750;XM_032911751 XP_032767640;XP_032767641;XP_032767642 rhomboid-related protein 1 protein-coding 625958258 Trim68 tripartite motif containing 68 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); identical protein binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of androgen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 2 102624649 102631512 - 22301074 116891805 MODEL JAAIVD010000001;XM_032893161;XM_032893162 XP_032749052;XP_032749053 E3 ubiquitin-protein ligase TRIM68 protein-coding 625958270 LOC116905470 uncharacterized LOC116905470 7 127316995 127318749 + 116905470 MODEL JAAIVD010000026;XR_004388541 ncrna 625958275 LOC116914080 A-kinase-interacting protein 1-like 12 28518647 28519288 + 116914080 MODEL JAAIVD010000007 pseudo 625958276 Fgf4 fibroblast growth factor 4 INVOLVED IN apoptotic process involved in morphogenesis (ortholog); cartilage condensation (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Pilonidal Sinus (ortholog) 2 4871393 4872778 - 22301074;30032202 116893610 MODEL JAAIVD010000001;XM_032895317 XP_032751208 protein-coding 625958281 LOC116883263 zinc finger protein 525-like 14 76817845 76819342 + 116883263 MODEL JAAIVD010000009 pseudo 625958282 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 59046687 59046758 + 116908469 MODEL JAAIVD010000027 trna 625958283 LOC116900364 olfactory receptor 5W2-like 5 69374131 69375088 - 116900364 MODEL JAAIVD010000023 pseudo 625958284 LOC116900495 olfactory receptor 4A15-like 5 71887588 71888511 - 22301074 116900495 MODEL JAAIVD010000023;XM_032902229 XP_032758120 protein-coding 625958287 Lars2 leucyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits leucine-tRNA ligase activity (ortholog); INVOLVED IN leucyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); HYDROPS, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA (ortholog); mitochondrial myopathy (ortholog); FOUND IN mitochondrion (ortholog) 8 114486218 114579468 + 22301074;30032202 116908025 MODEL JAAIVD010000027;XM_032911289 XP_032767180 probable leucine--tRNA ligase, mitochondrial protein-coding 625958312 Ube2j2 ubiquitin conjugating enzyme E2 J2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); protein K6-linked ubiquitination (ortholog); FOUND IN endoplasmic reticulum (ortholog); ubiquitin ligase complex (ortholog) 1 4692030 4705923 - 116891630 MODEL JAAIVD010000025;XM_032892847;XM_032892854;XM_032892861;XM_032892872;XM_032892881 XP_032748738;XP_032748745;XP_032748752;XP_032748763;XP_032748772 ubiquitin-conjugating enzyme E2 J2 protein-coding 625958332 Sdf2 stromal cell derived factor 2 ENCODES a protein that exhibits misfolded protein binding (ortholog); INVOLVED IN protein refolding (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein folding chaperone complex (ortholog) 9 92183243 92193668 - 116909950 MODEL JAAIVD010000002;XM_032913725 XP_032769616 stromal cell-derived factor 2 protein-coding 625958339 LOC116905673 mortality factor 4-like protein 1 7 14125619 14126592 - 116905673 MODEL JAAIVD010000026 pseudo 625958340 Dars1 aspartyl-tRNA synthetase 1 PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH genetic disease (ortholog); Hypomyelination with Brainstem and Spinal Cord Involvement and Leg Spasticity (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 7303812 7353830 + 22301074;30032202 116911073 MODEL JAAIVD010000005;XM_032914853 XP_032770744 aspartate--tRNA ligase, cytoplasmic protein-coding 625958360 LOC116893166 olfactory receptor 52R1-like 2 102778648 102779295 - 22301074 116893166 MODEL JAAIVD010000001;XM_032895078 XP_032750969 protein-coding 625958363 LOC116905672 60S ribosomal protein L11-like 7 35969171 35969704 + 116905672 MODEL JAAIVD010000026 pseudo 625958364 Dcaf13 DDB1 and CUL4 associated factor 13 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN decidualization (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cell junction (ortholog); centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) 1 212033114 212066767 - 22301074;30032202 116910809 MODEL JAAIVD010000025;XM_032914590 XP_032770481 DDB1- and CUL4-associated factor 13 protein-coding 625958379 Rpn2 ribophorin II ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN protein glycosylation (ortholog); protein N-linked glycosylation (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); Prostatic Neoplasms (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum (ortholog); nuclear body (ortholog) 5 136623727 136669733 + 22301074;30032202 116902222 MODEL JAAIVD010000023;XM_032904625;XM_032904626 XP_032760516;XP_032760517 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2 protein-coding 625958402 LOC116905804 ornithine decarboxylase-like 7 94652469 94653483 + 116905804 MODEL JAAIVD010000026 pseudo 625958403 LOC116885036 small nucleolar RNA SNORA48 15 39579161 39579299 - 116885036 MODEL JAAIVD010000010;XR_004385923 snorna 625958406 Rassf1 Ras association domain family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein ubiquitination (ortholog); protein stabilization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bladder disease (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) 8 98867653 98878939 + 30032202 116907527 MODEL JAAIVD010000027;XM_032910540;XM_032910541;XM_032910542 XP_032766431;XP_032766432;XP_032766433 ras association domain-containing protein 1 protein-coding 625958422 LOC116895271 small proline-rich protein 2H 3 1680097 1680381 - 22301074 116895271 MODEL JAAIVD010000012;XM_032896589 XP_032752480 protein-coding 625958425 Dera deoxyribose-phosphate aldolase ENCODES a protein that exhibits deoxyribose-phosphate aldolase activity (ortholog); INVOLVED IN deoxyribonucleoside catabolic process (ortholog); PARTICIPATES IN pentose phosphate pathway; ribose 5-phosphate isomerase deficiency pathway; transaldolase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) 6 11603045 11682011 - 22301074;30032202 116903143 MODEL JAAIVD010000024;XM_032905507 XP_032761398 protein-coding 625958438 Ssc4d scavenger receptor cysteine rich family member with 4 domains 16 18048195 18059269 + 22301074 116885723 MODEL JAAIVD010000004;XM_032887031 XP_032742922 scavenger receptor cysteine-rich domain-containing group B protein protein-coding 625958452 LOC116891653 uncharacterized LOC116891653 2 90258832 90276230 - 116891653 MODEL JAAIVD010000001;XR_004386854 ncrna 625958457 LOC116888072 ubiquitin-like protein FUBI X 89804618 89805854 + 116888072 MODEL JAAIVD010000014 pseudo 625958458 LOC116884756 glyceraldehyde-3-phosphate dehydrogenase-like 15 64380069 64381079 + 116884756 MODEL JAAIVD010000010 pseudo 625958459 Mks1 MKS transition zone complex subunit 1 INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); cardiac septum morphogenesis (ortholog); cilium assembly (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 13 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 82933909 82944911 - 30032202 116909906 MODEL JAAIVD010000002;XM_032913658;XM_032913659;XM_032913660 XP_032769549;XP_032769550;XP_032769551 Meckel syndrome type 1 protein protein-coding 625958487 Rnf13 ring finger protein 13 ENCODES a protein that exhibits JUN kinase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 73 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 3 96312552 96417838 + 30032202 116896848 MODEL JAAIVD010000012;XM_032898353 XP_032754244 E3 ubiquitin-protein ligase RNF13 protein-coding 625958501 Ppcdc phosphopantothenoylcysteine decarboxylase ENCODES a protein that exhibits FMN binding (ortholog); identical protein binding (ortholog); phosphopantothenoylcysteine decarboxylase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway 8 51304717 51326795 - 30032202 116907679 MODEL JAAIVD010000027;XM_032910774;XM_032910775 XP_032766665;XP_032766666 protein-coding 625958514 LOC116894033 olfactory receptor 51E1-like 2 102097664 102098605 - 22301074 116894033 MODEL JAAIVD010000001;XM_032895752 XP_032751643 protein-coding 625958517 LOC116900979 immunoglobulin kappa variable 4-1-like 5 108989534 108990238 + 116900979 MODEL JAAIVD010000023 pseudo 625958518 Nexn nexilin F-actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of cytoskeleton organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-substrate junction (ortholog); focal adhesion (ortholog) 3 9345144 9375263 + 30032202 116896157 MODEL JAAIVD010000012;XM_032897148;XM_032897149 XP_032753039;XP_032753040 nexilin protein-coding 625958541 LOC116893538 DNA replication ATP-dependent helicase/nuclease DNA2-like 2 203503521 203505037 + 116893538 MODEL JAAIVD010000001 pseudo 625958542 Rtn4rl1 reticulon 4 receptor like 1 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparin binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN corpus callosum development (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 9 93916167 93989452 + 22301074;30032202 116908856 MODEL JAAIVD010000002;XM_032912294 XP_032768185 reticulon-4 receptor-like 1 protein-coding 625958548 Tanc1 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 1 INVOLVED IN dendritic spine maintenance (ortholog); myoblast fusion (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 5 37320953 37549568 + 22301074;30032202 116901435 MODEL JAAIVD010000023;XM_032903343 XP_032759234 protein TANC1 protein-coding 625958579 Tfam transcription factor A, mitochondrial ENCODES a protein that exhibits chromatin binding (ortholog); heat shock protein binding (ortholog); mitochondrial promoter sequence-specific DNA binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex assembly (ortholog); mitochondrial transcription (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Animal Disease Models (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 18 15612499 15624707 + 30032202 116887138 MODEL JAAIVD010000013;XM_032888687 XP_032744578 protein-coding 625958590 LOC116906991 40S ribosomal protein S24-like 8 10896475 10896870 + 22301074;30032202 116906991 MODEL JAAIVD010000027;XM_032909918 XP_032765809 protein-coding 625958594 Mia3 MIA SH3 domain ER export factor 3 ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); genetic disease (ortholog); myocardial infarction (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 10 61584768 61626991 - 22301074;30032202 116911043 MODEL JAAIVD010000005;XM_032914788;XM_032914789;XM_032914790;XM_032914792 XP_032770679;XP_032770680;XP_032770681;XP_032770683 transport and Golgi organization protein 1 homolog protein-coding 625958632 Metap1 methionyl aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN platelet aggregation (ortholog); protein maturation (ortholog); ASSOCIATED WITH intellectual disability (ortholog) 3 20665811 20700810 + 22301074 116896207 MODEL JAAIVD010000012;XM_032897255 XP_032753146 methionine aminopeptidase 1 protein-coding 625958647 Kcna1 potassium voltage-gated channel subfamily A member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); disordered domain specific binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN axon development (ortholog); brain development (ortholog); cell communication by electrical coupling (ortholog); ASSOCIATED WITH epilepsy (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); episodic ataxia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon initial segment (ortholog) 6 21259536 21265218 + 22301074;30032202;3191911 116903243 MODEL JAAIVD010000024;X12589;XM_032905621 CAA31102;XP_032761512 protein-coding 625958653 Madd MAP kinase activating death domain ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN anterograde synaptic vesicle transport (ortholog); execution phase of apoptosis (ortholog); negative regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); DEEAH Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 5 65305138 65350073 - 30032202 116901613 MODEL JAAIVD010000023;XM_032903657 XP_032759548 MAP kinase-activating death domain protein protein-coding 625958694 LOC116888400 ADP-ribosylation factor-like protein 13A X 79597130 79599696 - 116888400 MODEL JAAIVD010000014;XM_032889676 XP_032745567 protein-coding 625958702 Fbxl22 F-box and leucine rich repeat protein 22 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); SCF ubiquitin ligase complex (ortholog) 8 60871120 60875641 - 22301074 116908035 MODEL JAAIVD010000027;XM_032911306;XM_032911307 XP_032767197;XP_032767198 F-box and leucine-rich protein 22 protein-coding 625958712 Cryzl1 crystallin zeta like 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN early endosome (ortholog) 4 52869073 52909098 + 22301074 116898990 MODEL JAAIVD010000003;XM_032900428;XM_032900429 XP_032756319;XP_032756320 quinone oxidoreductase-like protein 1 protein-coding 625958730 LOC116899792 U7 small nuclear RNA 4 88291981 88292043 + 116899792 MODEL JAAIVD010000003;XR_004387798 snrna 625958733 Hsf2 heat shock transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 34170187 34198223 + 22301074 116886939 MODEL JAAIVD010000013;XM_032888435;XM_032888436;XM_032888437 XP_032744326;XP_032744327;XP_032744328 heat shock factor protein 2 protein-coding 625958756 LOC116888938 60S ribosomal protein L18-like X 1865239 1868103 - 116888938 MODEL JAAIVD010000014 pseudo 625958757 LOC116914822 nucleoside diphosphate kinase A-like 13 58052177 58052677 + 116914822 MODEL JAAIVD010000008 pseudo 625958758 Ifnar1 interferon alpha and beta receptor subunit 1 ENCODES a protein that exhibits cytokine binding (ortholog); interferon receptor activity (ortholog); JAK pathway signal transduction adaptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); PARTICIPATES IN type I interferon signaling pathway; ASSOCIATED WITH bacterial pneumonia (ortholog); Cardiovirus Infections (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 4 53100433 53121963 - 22301074 116898994 MODEL JAAIVD010000003;XM_032900436 XP_032756327 interferon alpha/beta receptor 1 protein-coding 625958773 LOC116888113 heterogeneous nuclear ribonucleoprotein M-like X 101078662 101080715 - 116888113 MODEL JAAIVD010000014 pseudo 625958774 Nkpd1 NTPase KAP family P-loop domain containing 1 2 171100589 171108021 - 116892526 MODEL JAAIVD010000001;XM_032894282;XM_032894283;XM_032894284 XP_032750173;XP_032750174;XP_032750175 NTPase KAP family P-loop domain-containing protein 1 protein-coding 625958787 LOC116904101 neurabin-1 6 133693013 133697153 - 30032202 116904101 MODEL JAAIVD010000024;XM_032906969 XP_032762860 protein-coding 625958794 LOC116900282 olfactory receptor 8K3-like 5 63507629 63508588 - 22301074;30032202 116900282 MODEL JAAIVD010000023;XM_032902036 XP_032757927 protein-coding 625958797 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 35078528 35078598 - 116902672 MODEL JAAIVD010000023 trna 625958798 LOC116894615 vomeronasal type-2 receptor 116-like 2 185692853 185705033 + 22301074;30032202 116894615 MODEL JAAIVD010000001;XM_032896329 XP_032752220 protein-coding 625958806 Mast1 microtubule associated serine/threonine kinase 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN brain development (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH female breast cancer (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) 17 15350550 15377545 + 22301074;30032202 116886223 MODEL JAAIVD010000011;XM_032887615 XP_032743506 microtubule-associated serine/threonine-protein kinase 1 protein-coding 625958836 LOC116900573 olfactory receptor 4F3/4F16/4F29-like 5 90297736 90305201 - 22301074 116900573 MODEL JAAIVD010000023;XM_032902296;XM_032902297 XP_032758187;XP_032758188 protein-coding 625958845 Ppp1r3e protein phosphatase 1 regulatory subunit 3E ENCODES a protein that exhibits [phosphorylase] phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) 12 70116398 70117633 + 30032202 116913941 MODEL JAAIVD010000007;XM_032918207 XP_032774098 protein-coding 625958851 LOC116890598 small nucleolar RNA SNORA17 1 80525576 80525691 + 116890598 MODEL JAAIVD010000025 pseudo 625958852 LOC116902759 perilipin-3-like 6 65375960 65377227 + 116902759 MODEL JAAIVD010000024 pseudo 625958853 Sar1b secretion associated Ras related GTPase 1B ENCODES a protein that exhibits amino acid sensor activity (ortholog); G protein activity (ortholog); INVOLVED IN cellular response to leucine starvation (ortholog); COPII vesicle coating (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH chylomicron retention disease (ortholog); genetic disease (ortholog); Hereditary Pancreatitis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum exit site (ortholog) 9 34351754 34380524 + 22301074;30032202 116910250 MODEL JAAIVD010000002;XM_032914141 XP_032770032 GTP-binding protein SAR1b protein-coding 625958864 Mrpl10 mitochondrial ribosomal protein L10 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 57339781 57347222 - 30032202 116909673 MODEL JAAIVD010000002;XM_032913328 XP_032769219 39S ribosomal protein L10, mitochondrial protein-coding 625958873 Yrdc yrdC N6-threonylcarbamoyltransferase domain containing ENCODES a protein that exhibits L-threonylcarbamoyladenylate synthase (ortholog); INVOLVED IN negative regulation of transport (ortholog); tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat Syndrome 10 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrion (ortholog) 1 33441036 33445461 - 22301074;30032202 116896864 MODEL JAAIVD010000025;XM_032898392 XP_032754283 yrdC domain-containing protein, mitochondrial protein-coding 625958882 Rufy3 RUN and FYVE domain containing 3 ENCODES a protein that exhibits dynactin binding (ortholog); INVOLVED IN actin filament organization (ortholog); negative regulation of axonogenesis (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); skin disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 11 2055531 2139481 + 22301074;30032202 116912760 MODEL JAAIVD010000006;XM_032916909;XM_032916910 XP_032772800;XP_032772801 protein RUFY3 protein-coding 625958909 LOC116886067 olfactory receptor 6C1-like 1 215103134 215104083 - 22301074;30032202 116886067 MODEL JAAIVD010000025;XM_032887419 XP_032743310 protein-coding 625958912 LOC116888427 uncharacterized LOC116888427 X 58352401 58353554 - 116888427 MODEL JAAIVD010000014;XR_004386311 ncrna 625958917 LOC116897653 small nucleolar RNA U3 3 110836046 110836167 - 116897653 MODEL JAAIVD010000012 pseudo 625958918 LOC116905588 ubiquitin-conjugating enzyme E2 S-like 7 4265388 4266697 + 116905588 MODEL JAAIVD010000026 pseudo 625958919 Uvrag UV radiation resistance associated ENCODES a protein that exhibits SH3 domain binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); centrosome cycle (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN autophagosome membrane (ortholog); centrosome (ortholog); DNA-dependent protein kinase complex (ortholog) 2 97160014 97417614 - 30032202 116891717 MODEL JAAIVD010000001;XM_032893006 XP_032748897 UV radiation resistance-associated gene protein protein-coding 625958938 Nf1 neurofibromin 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); microtubule binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adrenal gland development (ortholog); amygdala development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; syndecan signaling pathway; ASSOCIATED WITH acute monocytic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 90861073 91091922 - 22301074 116908512 MODEL JAAIVD010000002;XM_032911686;XM_032911687 XP_032767577;XP_032767578 neurofibromin protein-coding 625959003 LOC116888087 methionine aminopeptidase 2-like X 93465344 93466735 - 116888087 MODEL JAAIVD010000014 pseudo 625959004 Ift56 intraflagellar transport 56 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH BILIARY, RENAL, NEUROLOGIC, AND SKELETAL SYNDROME (ortholog); Caroli disease (ortholog); hydrocephalus (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 6 101387336 101442658 - 22301074;30032202 116903948 MODEL JAAIVD010000024;XM_032906734;XM_032906735;XR_004388314 XP_032762625;XP_032762626 Ttc26 intraflagellar transport protein 56;tetratricopeptide repeat domain 26 protein-coding 625959030 Adrb2 adrenoceptor beta 2 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); amyloid-beta binding (ortholog); B2 bradykinin receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); PARTICIPATES IN adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH acute kidney failure (ortholog); AIDS Dementia Complex (ortholog); Angina Pectoris (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); caveola (ortholog) 15 69768706 69770962 + 22301074;30032202 116884504 MODEL JAAIVD010000010;XM_032885634 XP_032741525 beta-2 adrenergic receptor protein-coding 625959035 LOC116893733 uncharacterized LOC116893733 2 15948264 15962470 - 116893733 MODEL JAAIVD010000001;XR_004387001 ncrna 625959040 LOC116896965 U6 snRNA-associated Sm-like protein LSm5 3 122479731 122480218 - 22301074;30032202 116896965 MODEL JAAIVD010000012;XM_032898542 XP_032754433 protein-coding 625959045 Pdia2 protein disulfide isomerase family A member 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN platelet aggregation (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway 9 3456181 3459282 - 22301074;30032202 116910557 MODEL JAAIVD010000002;XM_032914468;XM_032914469 XP_032770359;XP_032770360 protein disulfide-isomerase A2 protein-coding 625959062 LOC116905951 14-3-3 protein sigma-like 7 20729058 20729954 - 30032202 116905951 MODEL JAAIVD010000026;XM_032908952 XP_032764843 protein-coding 625959067 LOC116896494 uncharacterized LOC116896494 3 60405299 60407283 + 116896494 MODEL JAAIVD010000012;XR_004387340 ncrna 625959071 LOC116913522 40S ribosomal protein S12-like 12 75210404 75210890 + 22301074;30032202 116913522 MODEL JAAIVD010000007;XM_032917724 XP_032773615 protein-coding 625959076 LOC116914968 60S ribosomal protein L21-like 13 43402771 43403253 - 22301074;30032202 116914968 MODEL JAAIVD010000008;XM_032919378 XP_032775269 protein-coding 625959079 Erich4 glutamate rich 4 2 169177862 169179207 + 116892456 MODEL JAAIVD010000001;XM_032894171 XP_032750062 glutamate-rich protein 4 protein-coding 625959085 LOC116887527 sodium-dependent glucose transporter 1B 18 39737071 39744980 - 22301074 116887527 MODEL JAAIVD010000013;XM_032889157 XP_032745048 protein-coding 625959093 LOC116895338 glyceraldehyde-3-phosphate dehydrogenase-like 3 40262307 40263302 - 116895338 MODEL JAAIVD010000012 pseudo 625959094 Mapk1 mitogen-activated protein kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); B cell receptor signaling pathway (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; Bone morphogenetic proteins signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); caveola (ortholog); ciliary basal body (ortholog) 4 2258527 2323147 + 22301074;30032202 116898621 MODEL JAAIVD010000003;XM_032899830;XM_032899832;XM_032899833 XP_032755721;XP_032755723;XP_032755724 protein-coding 625959112 Rac3 Rac family small GTPase 3 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell projection assembly (ortholog); cerebral cortex GABAergic interneuron development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN cell periphery (ortholog); endomembrane system (ortholog); filamentous actin (ortholog) 9 63294366 63297278 - 22301074;30032202 116909849 MODEL JAAIVD010000002;XM_032913574;XM_032913575 XP_032769465;XP_032769466 ras-related C3 botulinum toxin substrate 3 protein-coding 625959125 Neurl4 neuralized E3 ubiquitin protein ligase 4 INVOLVED IN mitochondrial DNA repair (ortholog); spermatogenesis (ortholog) 9 49511452 49523337 + 30032202 116908503 MODEL JAAIVD010000002;XM_032911673;XM_032911674;XM_032911675 XP_032767564;XP_032767565;XP_032767566 neuralized-like protein 4 protein-coding 625959161 Fan1 FANCD2 and FANCI associated nuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); flap-structured DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 2 136035002 136061697 + 30032202 116892010 MODEL JAAIVD010000001;XM_032893471 XP_032749362 fanconi-associated nuclease 1 protein-coding 625959179 LOC116889914 60S ribosomal protein L29-like 1 246660025 246660877 - 116889914 MODEL JAAIVD010000025 pseudo 625959180 Sike1 suppressor of IKBKE 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); FOUND IN FAR/SIN/STRIPAK complex (ortholog) 3 55035745 55043471 - 116896454 MODEL JAAIVD010000012;XM_032897611 XP_032753502 protein-coding 625959189 LOC116900179 glyceraldehyde-3-phosphate dehydrogenase-like 5 34553935 34554935 + 22301074;30032202 116900179 MODEL JAAIVD010000023;XM_032901934 XP_032757825 protein-coding 625959193 Fgf5 fibroblast growth factor 5 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); glial cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); familial isolated trichomegaly (ortholog) 11 8512917 8533674 + 22301074;30032202 116912575 MODEL JAAIVD010000006;XM_032916690;XM_032916691 XP_032772581;XP_032772582 protein-coding 625959202 LOC116914708 mannose-binding protein A 13 19672585 19678692 + 30032202 116914708 MODEL JAAIVD010000008;XM_032919137;XM_032919138 XP_032775028;XP_032775029 protein-coding 625959216 Hyou1 hypoxia up-regulated 1 ENCODES a protein that exhibits ATP binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH immunodeficiency 59 (ortholog); spinocerebellar ataxia type 17 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); mitochondrion (ortholog) 8 38926722 38938845 + 22301074;30032202 116906860 MODEL JAAIVD010000027;XM_032909760;XM_032909761;XM_032909762;XM_032909763 XP_032765651;XP_032765652;XP_032765653;XP_032765654 hypoxia up-regulated protein 1 protein-coding 625959254 LOC116893917 heterogeneous nuclear ribonucleoprotein A1-like 2 81263814 81264800 + 116893917 MODEL JAAIVD010000001 pseudo 625959255 Bhlha9 basic helix-loop-helix family member a9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); ASSOCIATED WITH Complex Camptosynpolydactyly (ortholog); genetic disease (ortholog); Mesoaxial Synostotic Syndactyly with Phalangeal Reduction (ortholog); FOUND IN cytoplasm (ortholog) 9 95364578 95365700 + 22301074;30032202 116910131 MODEL JAAIVD010000002;XM_032913966 XP_032769857 class A basic helix-loop-helix protein 9 protein-coding 625959259 LOC116902843 GTPase IMAP family member 9-like 6 92293318 92294414 - 22301074 116902843 MODEL JAAIVD010000024;XM_032905173 XP_032761064 protein-coding 625959264 LOC116888489 olfactory receptor 2K2 1 92866798 92869406 + 22301074 116888489 MODEL JAAIVD010000025;XM_032889766 XP_032745657 protein-coding 625959269 Rp2 RP2 activator of ARL3 GTPase ENCODES a protein that exhibits GTPase activator activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN post-chaperonin tubulin folding pathway (ortholog); post-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Eye Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) X 1184467 1205808 - 30032202 116888936 MODEL JAAIVD010000014;XM_032890174 XP_032746065 protein XRP2 protein-coding 625959277 Mrrf mitochondrial ribosome recycling factor INVOLVED IN ribosome disassembly (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN mitochondrion (ortholog) 5 13287001 13339194 - 30032202 116901340 MODEL JAAIVD010000023;XM_032903170;XM_032903171 XP_032759061;XP_032759062 ribosome-recycling factor, mitochondrial protein-coding 625959290 Kif23 kinesin family member 23 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type IIIa (ortholog); COVID-19 (ortholog); FOUND IN centralspindlin complex (ortholog); centrosome (ortholog); Flemming body (ortholog) 8 56222213 56248894 - 22301074;30032202 116907191 MODEL JAAIVD010000027;XM_032910149;XM_032910150;XM_032910151;XM_032910152 XP_032766040;XP_032766041;XP_032766042;XP_032766043 kinesin-like protein KIF23 protein-coding 625959325 Msl2 MSL complex subunit 2 ENCODES a protein that exhibits histone H2B ubiquitin ligase activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); epigenetic regulation of gene expression (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Karayol-Borroto-Haghshenas Neurodevelopmental Syndrome (ortholog); FOUND IN chromatin (ortholog); MSL complex (ortholog); nucleus (ortholog) 8 92442834 92467286 + 22301074;30032202 116907251 MODEL JAAIVD010000027;XM_032910209 XP_032766100 E3 ubiquitin-protein ligase MSL2 protein-coding 625959331 LOC116884466 N-alpha-acetyltransferase 11 15 52012378 52018813 - 30032202 116884466 MODEL JAAIVD010000010;XM_032885574 XP_032741465 protein-coding 625959339 Ilk integrin linked kinase ENCODES a protein that exhibits ATP binding (ortholog); integrin binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); caveola assembly (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Cocaine-Related Disorders (ortholog); Colonic Polyps (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cell-cell junction (ortholog) 2 104578387 104584650 + 22301074;30032202 116891825 MODEL JAAIVD010000001;XM_032893190 XP_032749081 integrin-linked protein kinase protein-coding 625959356 Rpa2 replication protein A2 ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); DNA replication factor A complex (ortholog) 1 25461393 25471849 - 22301074;30032202 116895389 MODEL JAAIVD010000025;XM_032896683 XP_032752574 replication protein A 32 kDa subunit protein-coding 625959369 Fbxo36 F-box protein 36 4 157537302 157603928 + 22301074 116899576 MODEL JAAIVD010000003;XM_032901512 XP_032757403 F-box only protein 36 protein-coding 625959377 Stmn2 stathmin 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of microtubule depolymerization (ortholog); negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); motor peripheral neuropathy (ortholog); neuropathy (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); lamellipodium (ortholog) 3 142681994 142731031 + 22301074;30032202 116897024 MODEL JAAIVD010000012;XM_032898637 XP_032754528 stathmin-2 protein-coding 625959386 Stap2 signal transducing adaptor family member 2 FOUND IN plasma membrane (ortholog) 4 87389344 87397577 - 30032202 116899163 MODEL JAAIVD010000003;XM_032900726 XP_032756617 signal-transducing adaptor protein 2 protein-coding 625959403 Slc26a2 solute carrier family 26 member 2 ENCODES a protein that exhibits solute:inorganic anion antiporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); chondrocyte proliferation (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH 3MC syndrome 2 (ortholog); achondrogenesis (ortholog); achondrogenesis type IB (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog); plasma membrane (ortholog) 15 70738785 70752735 + 22301074;30032202 116884463 MODEL JAAIVD010000010;XM_032885566;XM_032885567 XP_032741457;XP_032741458 sulfate transporter protein-coding 625959415 Cimip2c ciliary microtubule inner protein 2C INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 7 23598663 23616311 - 116905727 MODEL JAAIVD010000026;XM_032908695 XP_032764586 Fam166c family with sequence similarity 166 member C;protein FAM166C protein-coding 625959423 LOC116885210 NADPH--cytochrome P450 reductase ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); electron transfer activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; doxorubicin pharmacokinetics pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); amenorrhea (ortholog); Antley-Bixler syndrome (ortholog) 16 18289979 18337656 - 22301074;30032202 116885210 MODEL JAAIVD010000004;XM_032886441 XP_032742332 protein-coding 625959443 LOC116897808 60S ribosomal protein L31-like 4 7594657 7595104 + 116897808 MODEL JAAIVD010000003 pseudo 625959444 Ttc9c tetratricopeptide repeat domain 9C ASSOCIATED WITH Prostatic Neoplasms (ortholog) 2 9128257 9137303 + 22301074 116890924 MODEL JAAIVD010000001;XM_032891561;XM_032891562;XM_032891563 XP_032747452;XP_032747453;XP_032747454 tetratricopeptide repeat protein 9C protein-coding 625959456 Znf205 zinc finger protein 205 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of hydrogen peroxide biosynthetic process (ortholog); positive regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 9 896537 904806 - 30032202 116910001 MODEL JAAIVD010000002;XM_032913785;XM_032913786;XM_032913787 XP_032769676;XP_032769677;XP_032769678 protein-coding 625959472 LOC116912252 glyceraldehyde-3-phosphate dehydrogenase-like 11 16454320 16455330 - 22301074;30032202 116912252 MODEL JAAIVD010000006;XM_032916238 XP_032772129 protein-coding 625959476 LOC116884764 interferon-inducible GTPase 1-like 15 71596764 71607557 - 22301074;30032202 116884764 MODEL JAAIVD010000010;XM_032885980 XP_032741871 protein-coding 625959482 Ercc6 ERCC excision repair 6, chromatin remodeling factor ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH age related macular degeneration 5 (ortholog); Agenesis of Corpus Callosum (ortholog); arthrogryposis multiplex congenita (ortholog); FOUND IN B-WICH complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) 13 8222513 8294516 + 22301074;30032202 116914242 MODEL JAAIVD010000008;XM_032918450 XP_032774341 DNA excision repair protein ERCC-6 protein-coding 625959507 Rnase11 ribonuclease A family member 11 (inactive) 12 72264681 72266644 + 30032202 116914094 MODEL JAAIVD010000007;XM_032918408 XP_032774299 probable ribonuclease 11 protein-coding 625959513 LOC116889147 small integral membrane protein 10-like protein 2A X 117009652 117010042 + 116889147 MODEL JAAIVD010000014;XM_032890315 XP_032746206 protein-coding 625959518 LOC116895981 transcription and mRNA export factor ENY2-like 3 157866754 157868483 + 116895981 MODEL JAAIVD010000012 pseudo 625959519 Tmprss11a transmembrane serine protease 11A 11 761630 800036 - 22301074 116912096 MODEL JAAIVD010000006;XM_032915987 XP_032771878 transmembrane protease serine 11A protein-coding 625959529 LOC116883799 pyruvate kinase PKM-like 14 45776488 45778035 + 116883799 MODEL JAAIVD010000009 pseudo 625959530 LOC116901391 uncharacterized LOC116901391 5 26801980 26985394 + 116901391 MODEL JAAIVD010000023;XR_004387986 ncrna 625959536 LOC116906315 U6 spliceosomal RNA 7 106491455 106491562 + 116906315 MODEL JAAIVD010000026;XR_004388603 snrna 625959539 KEG97_t16 tRNA-Arg MT 9792 9859 + 64988254 trna 625959540 S100g S100 calcium binding protein G PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) X 23404875 23407483 + 22301074;30032202 116888393 MODEL JAAIVD010000014;XM_032889665;XM_032889666 XP_032745556;XP_032745557 protein S100-G protein-coding 625959550 Gphn gephyrin ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); molybdopterin adenylyltransferase activity (ortholog); INVOLVED IN establishment of protein localization (ortholog); establishment of synaptic specificity at neuromuscular junction (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 7 92506553 92795666 + 22301074;30032202 116905195 MODEL JAAIVD010000026;XM_032907990 XP_032763881 protein-coding 625959577 LOC116898380 olfactory receptor 183-like 4 70319385 70323394 - 116898380 MODEL JAAIVD010000003 pseudo 625959578 Faxc failed axon connections homolog, metaxin like GST domain containing ASSOCIATED WITH prostate cancer (ortholog) 1 121352393 121414115 - 30032202 116902878 MODEL JAAIVD010000025;XM_032905212 XP_032761103 failed axon connections homolog protein-coding 625959588 LOC116888479 60 kDa heat shock protein, mitochondrial-like 1 92538299 92540062 + 116888479 MODEL JAAIVD010000025 pseudo 625959589 LOC116904438 cystic fibrosis transmembrane conductance regulator 6 119860484 120138037 + 22301074;30032202 116904438 MODEL JAAIVD010000024;XM_032907266 XP_032763157 protein-coding 625959606 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 7847980 7848052 + 116914204 MODEL JAAIVD010000007 trna 625959607 LOC116906036 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like 7 38873263 38873601 + 116906036 MODEL JAAIVD010000026 pseudo 625959608 LOC116911684 contactin-associated protein like 5-4 10 81520642 81986483 - 116911684 MODEL JAAIVD010000005;XM_032915638;XM_032915639 XP_032771529;XP_032771530 protein-coding 625959625 LOC116890014 40S ribosomal protein SA-like 1 6667599 6668757 + 116890014 MODEL JAAIVD010000025 pseudo 625959626 LOC116912968 small nucleolar RNA SNORA48 11 25450562 25450703 - 116912968 MODEL JAAIVD010000006;XR_004389534 snorna 625959629 LOC116894023 olfactory receptor 51B6-like 2 101971800 101972753 + 22301074 116894023 MODEL JAAIVD010000001;XM_032895739 XP_032751630 protein-coding 625959632 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41787314 41787395 + 116884218 MODEL JAAIVD010000009 trna 625959633 LOC116894915 U7 small nuclear RNA 2 220672708 220672769 - 116894915 MODEL JAAIVD010000001;XR_004387117 snrna 625959636 LOC116889761 small nuclear ribonucleoprotein G-like 116889761 MODEL JAAIVD010000081 pseudo 625959637 LOC116889616 histone demethylase UTY-like Y 136762 158928 + 22301074;30032202 116889616 MODEL JAAIVD010000015;XM_032890541 XP_032746432 protein-coding 625959648 LOC116914949 ral guanine nucleotide dissociation stimulator-like 13 11616202 11617886 - 116914949 MODEL JAAIVD010000008 pseudo 625959649 Oscp1 organic solute carrier partner 1 ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN xenobiotic detoxification by transmembrane export across the plasma membrane (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog) 1 32204412 32240285 - 30032202 116896739 MODEL JAAIVD010000025;XM_032898176;XM_032898185 XP_032754067;XP_032754076 protein OSCP1 protein-coding 625959665 LOC116909683 olfactory receptor 6C1-like 1 160771401 160772356 + 116909683 MODEL JAAIVD010000025 pseudo 625959666 Hmbs hydroxymethylbilane synthase ENCODES a protein that exhibits amine binding (ortholog); carboxylic acid binding (ortholog); hydroxymethylbilane synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); astrocyte differentiation (ortholog); cellular response to amine stimulus (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH Abdominal Pain (ortholog); acute intermittent porphyria (ortholog); Acute Intermittent Porphyria, Nonerythroid Variant (ortholog); FOUND IN axon (ortholog); condensed chromosome (ortholog); cytosol (ortholog) 8 38893551 38901085 - 22301074;30032202 116907086 MODEL JAAIVD010000027;XM_032910050;XM_032910051 XP_032765941;XP_032765942 porphobilinogen deaminase protein-coding 625959688 LOC116900554 olfactory receptor 4K14-like 5 89916394 89917335 - 22301074 116900554 MODEL JAAIVD010000023;XM_032902280 XP_032758171 protein-coding 625959692 Zyg11a zyg-11 family member A, cell cycle regulator 1 46626838 46662176 + 22301074;30032202 116887489 MODEL JAAIVD010000025;XM_032889116 XP_032745007 protein zyg-11 homolog A protein-coding 625959708 LOC116903984 uncharacterized LOC116903984 1 142127916 142129586 - 116903984 MODEL JAAIVD010000025 pseudo 625959709 Fgf18 fibroblast growth factor 18 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); chondrocyte development (ortholog); endochondral ossification (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Diaphragmatic Hernia (ortholog); Dwarfism (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 9 5945375 5975364 - 22301074;30032202 116909115 MODEL JAAIVD010000002;XM_032912591 XP_032768482 protein-coding 625959718 Rtkn rhotekin ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); Rho protein signal transduction (ortholog); signal transduction (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog) 6 63074099 63090918 - 22301074;30032202 116903621 MODEL JAAIVD010000024;XM_032906274;XM_032906275;XM_032906276;XM_032906278;XM_032906279;XM_032906280 XP_032762165;XP_032762166;XP_032762167;XP_032762169;XP_032762170;XP_032762171 protein-coding 625959752 LOC116904775 small nucleolar RNA SNORA17 6 23851337 23851456 + 116904775 MODEL JAAIVD010000024 pseudo 625959753 Acox1 acyl-CoA oxidase 1 ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); cholesterol homeostasis (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) 9 67866534 67891310 + 22301074;30032202 116908524 MODEL JAAIVD010000002;XM_032911700;XM_032911701 XP_032767591;XP_032767592 peroxisomal acyl-coenzyme A oxidase 1 protein-coding 625959773 LOC116888771 myosin light chain 6B-like X 35477894 35478516 - 116888771 MODEL JAAIVD010000014 pseudo 625959774 Mterf1 mitochondrial transcription termination factor 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN DNA geometric change (ortholog); DNA-templated transcription termination (ortholog); termination of mitochondrial transcription (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 6 136192460 136197901 - 22301074;30032202 116904122 MODEL JAAIVD010000024;XM_032907007;XR_004388329 XP_032762898 transcription termination factor 1, mitochondrial protein-coding 625959783 LOC116892754 vomeronasal type-1 receptor 2-like 2 180986110 180987039 - 22301074;30032202 116892754 MODEL JAAIVD010000001;XM_032894632 XP_032750523 protein-coding 625959787 Sft2d2 SFT2 domain containing 2 10 44343857 44359723 - 22301074;30032202 116911195 MODEL JAAIVD010000005;XM_032915066 XP_032770957 vesicle transport protein SFT2B protein-coding 625959799 LOC116908399 small nucleolar RNA SNORA17 8 81405578 81405708 + 116908399 MODEL JAAIVD010000027;XR_004388943 snorna 625959802 Sardh sarcosine dehydrogenase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); folic acid binding (ortholog); sarcosine dehydrogenase activity (ortholog); INVOLVED IN choline catabolic process (ortholog); glycine biosynthetic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hypoxia (ortholog); sarcosinemia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 9411910 9474359 + 22301074;30032202 116901241 MODEL JAAIVD010000023;XM_032902992 XP_032758883 sarcosine dehydrogenase, mitochondrial protein-coding 625959828 Hm13 histocompatibility minor 13 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); peptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); ASSOCIATED WITH Herpesviridae Infections (ortholog); steatotic liver disease (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); Derlin-1 retrotranslocation complex (ortholog) 5 131998125 132033598 + 22301074;30032202 116902123 MODEL JAAIVD010000023;XM_032904438;XM_032904439;XM_032904440 XP_032760329;XP_032760330;XP_032760331 minor histocompatibility antigen H13 protein-coding 625959851 Zmym5 zinc finger MYM-type containing 5 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 12 68026807 68043055 + 22301074 116913334 MODEL JAAIVD010000007;XM_032917482 XP_032773373 zinc finger MYM-type protein 5 protein-coding 625959861 Tmco5a transmembrane and coiled-coil domains 5A ASSOCIATED WITH prostate cancer (ortholog) 5 95027891 95042002 + 116901769 MODEL JAAIVD010000023;XM_032903909;XM_032903910 XP_032759800;XP_032759801 transmembrane and coiled-coil domain-containing protein 5A protein-coding 625959876 LOC116886756 5S ribosomal RNA 17 43150245 43150363 - 116886756 MODEL JAAIVD010000011;XR_004386158 rrna 625959879 LOC116903226 cytochrome c oxidase subunit 7B, mitochondrial 6 19550062 19550531 + 22301074;30032202 116903226 MODEL JAAIVD010000024;XM_032905600 XP_032761491 protein-coding 625959884 LOC116894534 vomeronasal type-2 receptor 116-like 2 176123650 176142873 - 116894534 MODEL JAAIVD010000001 pseudo 625959885 LOC116899590 uncharacterized LOC116899590 4 158596908 158598467 + 116899590 MODEL JAAIVD010000003;XR_004387737 ncrna 625959889 Plcb1 phospholipase C beta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); cellular response to fluoride (ortholog); cellular response to glyceraldehyde (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) 5 114455130 115126707 + 22301074;30032202 116902013 MODEL JAAIVD010000023;XM_032904280;XM_032904282 XP_032760171;XP_032760173 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1 protein-coding 625959930 LOC116887894 2,4-dienoyl-CoA reductase, mitochondrial-like X 51530588 51532506 - 116887894 MODEL JAAIVD010000014 pseudo 625959931 LOC116889633 U6 spliceosomal RNA Y 2257678 2257774 + 116889633 MODEL JAAIVD010000015 pseudo 625959932 Tmem106a transmembrane protein 106A INVOLVED IN glycoprotein biosynthetic process (ortholog); macrophage activation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); neuromuscular disease (ortholog); FOUND IN plasma membrane (ortholog) 9 60863903 60871839 + 116910029 MODEL JAAIVD010000002;XM_032913813;XM_032913814 XP_032769704;XP_032769705 protein-coding 625959948 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 14550638 14550720 - 116886806 MODEL JAAIVD010000011 trna 625959949 LOC116899969 ribosome biogenesis protein NSA2 homolog 5 114558904 114559819 - 116899969 MODEL JAAIVD010000023 pseudo 625959950 Nmd3 NMD3 ribosome export adaptor ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN positive regulation of protein localization to nucleolus (ortholog); positive regulation of RNA biosynthetic process (ortholog); ribosomal large subunit export from nucleus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 85577341 85603451 - 30032202 116896788 MODEL JAAIVD010000012;XM_032898257 XP_032754148 60S ribosomal export protein NMD3 protein-coding 625959970 LOC116913253 PC4 and SFRS1-interacting protein-like 12 83735612 83738361 - 116913253 MODEL JAAIVD010000007 pseudo 625959971 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92685116 92685187 + 116904835 MODEL JAAIVD010000024 trna 625959972 LOC116914114 small nucleolar RNA SNORA17 12 83622510 83622641 + 116914114 MODEL JAAIVD010000007;XR_004389679 snorna 625959975 Tas2r42 taste 2 receptor member 42 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); FOUND IN membrane (ortholog) 6 15925281 15926231 - 22301074;30032202 116903768 MODEL JAAIVD010000024;XM_032906457 XP_032762348 taste receptor type 2 member 42 protein-coding 625959978 LOC116890358 U6 spliceosomal RNA 1 84045348 84045454 - 116890358 MODEL JAAIVD010000025;XR_004386576 snrna 625959981 LOC116889654 L-lactate dehydrogenase-like 22301074 116889654 MODEL JAAIVD010000045;XM_032890559 XP_032746450 protein-coding 625959982 Rflnb refilin B ENCODES a protein that exhibits filamin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle organization (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament bundle (ortholog) 9 94744974 94750936 - 22301074;30032202 116910038 MODEL JAAIVD010000002;XM_032913825;XM_032913826 XP_032769716;XP_032769717 refilin-B protein-coding 625959995 LOC116910087 serine/arginine-rich splicing factor 3-like 9 9199023 9200579 + 22301074;30032202 116910087 MODEL JAAIVD010000002;XM_032913909 XP_032769800 protein-coding 625960000 Prorp protein only RNase P catalytic subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); INVOLVED IN mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 54 (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog); mitochondrion (ortholog) 7 68524034 68608278 + 22301074;30032202 116905056 MODEL JAAIVD010000026;XM_032907750 XP_032763641 mitochondrial ribonuclease P catalytic subunit protein-coding 625960011 LOC116886682 carboxylesterase 1D 17 15053461 15114900 + 30032202 116886682 MODEL JAAIVD010000011;XM_032888177;XM_032888178 XP_032744068;XP_032744069 protein-coding 625960033 LOC116892708 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178479572 178485984 - 30032202 116892708 MODEL JAAIVD010000001;XM_032894573 XP_032750464 protein-coding 625960046 LOC116912335 60S ribosomal protein L9-like 11 80128774 80129351 + 116912335 MODEL JAAIVD010000006 pseudo 625960047 Fzd6 frizzled class receptor 6 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell proliferation in midbrain (ortholog); embryonic nail plate morphogenesis (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, non-canonical pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH genetic disease (ortholog); Hydrops Fetalis (ortholog); nail disease (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog) 1 212144393 212174816 - 30032202 116910841 MODEL JAAIVD010000025;XM_032914595 XP_032770486 frizzled-6 protein-coding 625960057 Lsmem1 leucine rich single-pass membrane protein 1 7 53412362 53417851 - 116905829 MODEL JAAIVD010000026;XM_032908795 XP_032764686 leucine-rich single-pass membrane protein 1 protein-coding 625960062 Sacm1l SAC1 like phosphatidylinositide phosphatase ENCODES a protein that exhibits phosphatase activity (ortholog); phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); neurotransmitter receptor transport to postsynaptic membrane (ortholog); phosphatidylinositol dephosphorylation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 114654457 114712678 + 30032202 116908027 MODEL JAAIVD010000027;XM_032911292 XP_032767183 phosphatidylinositide phosphatase SAC1 protein-coding 625960086 LOC116886923 60S ribosomal protein L21-like 1 29303136 29303690 - 22301074;30032202 116886923 MODEL JAAIVD010000025;XM_032888406 XP_032744297 protein-coding 625960091 Sp1 Sp1 transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to wortmannin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); Colorectal Neoplasms (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 1 260642848 260671493 - 30032202 116883469 MODEL JAAIVD010000025;XM_032884625;XM_032884632 XP_032740516;XP_032740523 transcription factor Sp1 protein-coding 625960103 Tox thymocyte selection associated high mobility group box ENCODES a protein that exhibits chromatin DNA binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment (ortholog); CD8-positive, alpha-beta T cell lineage commitment (ortholog); FOUND IN nucleus (ortholog) 1 135357618 135508703 - 30032202 116903543 MODEL JAAIVD010000025;XM_032906160 XP_032762051 thymocyte selection-associated high mobility group box protein TOX protein-coding 625960115 LOC116905506 rRNA 2'-O-methyltransferase fibrillarin-like 7 129596314 129597155 + 116905506 MODEL JAAIVD010000026 pseudo 625960116 Znf143 zinc finger protein 143 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin loop anchoring activity (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN chromatin looping (ortholog); positive regulation of smooth muscle cell proliferation (ortholog); positive regulation of snRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH inherited metabolic disorder (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 91357212 91392595 - 30032202 116891666 MODEL JAAIVD010000001;XM_032892918;XM_032892919;XM_032892920 XP_032748809;XP_032748810;XP_032748811 protein-coding 625960141 Plp2 proteolipid protein 2 ENCODES a protein that exhibits chemokine binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) X 14461068 14464635 + 22301074 116888682 MODEL JAAIVD010000014;XM_032889977 XP_032745868 protein-coding 625960150 LOC116911588 60S ribosomal protein L7-like 10 48206488 48207144 - 30032202 116911588 MODEL JAAIVD010000005;XM_032915566 XP_032771457 protein-coding 625960153 Slc52a3 solute carrier family 52 member 3 ENCODES a protein that exhibits riboflavin transmembrane transporter activity (ortholog); INVOLVED IN cellular response to heat (ortholog); flavin adenine dinucleotide biosynthetic process (ortholog); riboflavin metabolic process (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); Brown-Vialetto-Van Laere syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 5 131361077 131373595 + 22301074;30032202 116902112 MODEL JAAIVD010000023;XM_032904424;XM_032904425 XP_032760315;XP_032760316 solute carrier family 52, riboflavin transporter, member 3 protein-coding 625960171 Polr3k RNA polymerase III subunit K ENCODES a protein that exhibits zinc ion binding (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Disease Progression (ortholog); hypomyelinating leukodystrophy 21 (ortholog); Stomach Neoplasms (ortholog); FOUND IN RNA polymerase III complex (ortholog) 1 104919 109162 + 22301074;30032202 116890660 MODEL JAAIVD010000025;XM_032891058 XP_032746949 DNA-directed RNA polymerase III subunit RPC10 protein-coding 625960178 LOC116889354 uncharacterized LOC116889354 X 69908518 69909881 - 116889354 MODEL JAAIVD010000014;XR_004386377 ncrna 625960182 Jag2 jagged canonical Notch ligand 2 ENCODES a protein that exhibits growth factor activity (ortholog); Notch binding (ortholog); INVOLVED IN auditory receptor cell fate commitment (ortholog); cell differentiation (ortholog); epithelial cell apoptotic process involved in palatal shelf morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 27 (ortholog); Breast Neoplasms (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 7 130506433 130528632 - 22301074;30032202 116905523 MODEL JAAIVD010000026;XM_032908547 XP_032764438 protein jagged-2 protein-coding 625960212 LOC116898848 serine/arginine repetitive matrix protein 1-like 1 99674042 99678052 + 116898848 MODEL JAAIVD010000025;XM_032900242 XP_032756133 protein-coding 625960218 Ldoc1 LDOC1 regulator of NFKB signaling INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to muramyl dipeptide (ortholog); maternal placenta development (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) X 121092397 121095605 + 116888581 MODEL JAAIVD010000014;XM_032889881 XP_032745772 protein LDOC1 protein-coding 625960224 Septin7 septin 7 ENCODES a protein that exhibits identical protein binding (ortholog); structural constituent of postsynapse (ortholog); INVOLVED IN collateral sprouting (ortholog); cortical cytoskeleton organization (ortholog); D-glucose import (ortholog); FOUND IN axon terminus (ortholog); axoneme (ortholog); cell cortex (ortholog) 8 21179571 21241816 + 22301074;30032202 116907755 MODEL JAAIVD010000027;XM_032910892;XM_032910893;XM_032910894 XP_032766783;XP_032766784;XP_032766785 septin-7 protein-coding 625960247 Gabra1 gamma-aminobutyric acid type A receptor subunit alpha1 ENCODES a protein that exhibits diazepam binding (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Ataxia (ortholog); autistic disorder (ortholog); FOUND IN dendritic spine (ortholog); GABA receptor complex (ortholog); GABA-A receptor complex (ortholog) 9 24984623 25041196 - 22301074;30032202 116908501 MODEL JAAIVD010000002;XM_032911671 XP_032767562 gamma-aminobutyric acid receptor subunit alpha-1 protein-coding 625960261 LOC116910190 vesicle-associated membrane protein 3-like 9 62790286 62790595 - 116910190 MODEL JAAIVD010000002 pseudo 625960262 LOC116888784 cytochrome c-type heme lyase ENCODES a protein that exhibits heme binding (ortholog); holocytochrome-c synthase activity (ortholog); INVOLVED IN cytochrome c-heme linkage (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrion (ortholog) X 27781824 27790842 + 22301074;30032202 116888784 MODEL JAAIVD010000014;XM_032890066 XP_032745957 protein-coding 625960272 LOC116890269 oogenesin-3-like 1 14591531 14597768 + 22301074;30032202 116890269 MODEL JAAIVD010000025;XM_032890987 XP_032746878 protein-coding 625960279 LOC116894902 U6 spliceosomal RNA 2 7441701 7441807 + 116894902 MODEL JAAIVD010000001;XR_004387105 snrna 625960282 LOC116902587 small nucleolar RNA SNORA17 5 108810764 108810899 + 116902587 MODEL JAAIVD010000023;XR_004388179 snorna 625960285 Pllp plasmolipin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN monoatomic ion transport (ortholog); myelin assembly (ortholog); myelination (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); schizophrenia (ortholog); FOUND IN apical plasma membrane (ortholog); compact myelin (ortholog); membrane raft (ortholog) 17 1562271 1582948 - 22301074;30032202 116886387 MODEL JAAIVD010000011;XM_032887853 XP_032743744 protein-coding 625960293 LOC116887773 small nucleolar RNA SNORD83 18 7847712 7847786 + 116887773 MODEL JAAIVD010000013;XR_004386270 snorna 625960296 Mbip MAP3K12 binding inhibitory protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of gene expression (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); cytosol (ortholog); nucleolus (ortholog) 7 69692227 69709423 - 30032202 116905066 MODEL JAAIVD010000026;XM_032907769;XM_032907770;XM_032907771 XP_032763660;XP_032763661;XP_032763662 MAP3K12-binding inhibitory protein 1 protein-coding 625960313 LOC116908429 U6atac minor spliceosomal RNA 8 39431012 39431135 + 116908429 MODEL JAAIVD010000027;XR_004388960 snrna 625960316 LOC116883766 aldo-keto reductase family 1 member C15 14 18335853 18362557 + 30032202 116883766 MODEL JAAIVD010000009;XM_032885012 XP_032740903 protein-coding 625960329 LOC116904450 nucleolar GTP-binding protein 1-like 6 127349595 127384327 - 22301074;30032202 116904450 MODEL JAAIVD010000024;XM_032907271 XP_032763162 protein-coding 625960335 LOC116902769 taste receptor type 2 member 117 6 16582273 16583232 + 22301074;30032202 116902769 MODEL JAAIVD010000024;XM_032905111 XP_032761002 protein-coding 625960338 LOC116905554 60S ribosomal protein L26-like 7 8180168 8182223 - 116905554 MODEL JAAIVD010000026 pseudo 625960339 Znf862 zinc finger protein 862 ASSOCIATED WITH gingival fibromatosis (ortholog); Gingival Fibromatosis 6 (ortholog); long QT syndrome (ortholog) 6 92443935 92465130 - 22301074 116903859 MODEL JAAIVD010000024;XM_032906602 XP_032762493 protein-coding 625960349 LOC116894280 glyceraldehyde-3-phosphate dehydrogenase-like 2 124680105 124681127 + 116894280 MODEL JAAIVD010000001 pseudo 625960350 Gpr37l1 G protein-coupled receptor 37 like 1 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); Bergmann glial cell differentiation (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 10 543747 550380 + 30032202 116911391 MODEL JAAIVD010000005;XM_032915344 XP_032771235 G-protein coupled receptor 37-like 1 protein-coding 625960356 LOC116894076 olfactory receptor 52E2 2 103049137 103050090 - 22301074 116894076 MODEL JAAIVD010000001;XM_032895799 XP_032751690 protein-coding 625960359 LOC116910722 small nucleolar RNA SNORA17 9 26049154 26049239 + 116910722 MODEL JAAIVD010000002 pseudo 625960360 Ap1g1 adaptor related protein complex 1 subunit gamma 1 ENCODES a protein that exhibits collagen binding (ortholog); GTP-dependent protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); Golgi to lysosome transport (ortholog); positive regulation of natural killer cell degranulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); USMANI-RIAZUDDIN SYNDROME, AUTOSOMAL DOMINANT (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 17 29489003 29575367 + 22301074;30032202 116886559 MODEL JAAIVD010000011;XM_032888076;XM_032888077 XP_032743967;XP_032743968 AP-1 complex subunit gamma-1 protein-coding 625960391 Rab8b RAB8B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); signaling receptor binding (ortholog); TPR domain binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cell-substrate junction organization (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Reperfusion Injury (ortholog); FOUND IN cell tip (ortholog); endosome membrane (ortholog); perinuclear region of cytoplasm (ortholog) 8 61208003 61278510 - 22301074;30032202 116908286 MODEL JAAIVD010000027;XM_032911546 XP_032767437 ras-related protein Rab-8B protein-coding 625960403 Sac3d1 SAC3 domain containing 1 INVOLVED IN centrosome duplication (ortholog); negative regulation of receptor signaling pathway via JAK-STAT (ortholog); regulation of immune response (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN centrosome (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) 2 1566674 1569088 + 30032202 116890673 MODEL JAAIVD010000001;XM_032891081 XP_032746972 SAC3 domain-containing protein 1 protein-coding 625960408 Porcn porcupine O-acyltransferase ENCODES a protein that exhibits palmitoleoyltransferase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein lipidation (ortholog); protein palmitoleylation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); focal dermal hypoplasia (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) X 15606358 15617521 - 30032202 116888774 MODEL JAAIVD010000014;XM_032890060 XP_032745951 protein-serine O-palmitoleoyltransferase porcupine protein-coding 625960426 Vps72 vacuolar protein sorting 72 homolog ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleosome (ortholog) 3 62130798 62142116 - 30032202 116896569 MODEL JAAIVD010000012;XM_032897778 XP_032753669 vacuolar protein sorting-associated protein 72 homolog protein-coding 625960436 LOC116905545 histone H2A.Z-like 7 4805113 4805499 + 116905545 MODEL JAAIVD010000026 pseudo 625960437 Ppm1d protein phosphatase, Mg2+/Mn2+ dependent 1D ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; p38 MAPK signaling pathway; p53 signaling pathway; ASSOCIATED WITH Brain Stem Neoplasms (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 85374816 85410249 - 22301074;30032202 116908924 MODEL JAAIVD010000002;XM_032912382 XP_032768273 protein phosphatase 1D protein-coding 625960447 Bex3 brain expressed X-linked 3 ENCODES a protein that exhibits death receptor binding (ortholog); identical protein binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); glaucoma (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 88276969 88278530 + 30032202 116889068 MODEL JAAIVD010000014;XM_032890251;XM_032890252 XP_032746142;XP_032746143 protein BEX3 protein-coding 625960458 Pex2 peroxisomal biogenesis factor 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); cellular response to reactive oxygen species (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleoplasm (ortholog); peroxisomal membrane (ortholog) 3 139527305 139543448 + 1750930;30032202 116897016 MODEL JAAIVD010000012;X57988;XM_032898620;XM_032898621 CAA41054;XP_032754511;XP_032754512 peroxisome assembly factor-1;peroxisome biogenesis factor 2 protein-coding 625960467 Ovch2 ovochymase 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN fertilization (ortholog) 2 105890563 105909982 - 22301074 116894178 MODEL JAAIVD010000001;XM_032895895 XP_032751786 ovochymase-2 protein-coding 625960485 LOC116905848 nascent polypeptide-associated complex subunit alpha 1 155517849 155529890 + 22301074;30032202 116905848 MODEL JAAIVD010000025;XM_032908823;XM_032908831 XP_032764714;XP_032764722 protein-coding 625960500 Slc6a4 solute carrier family 6 member 4 ENCODES a protein that exhibits actin filament binding (ortholog); antiporter activity (ortholog); cocaine binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); brain morphogenesis (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH AIDS Dementia Complex (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endomembrane system (ortholog); focal adhesion (ortholog); membrane raft (ortholog) 9 95681278 95702618 + 22301074;30032202 116909801 MODEL JAAIVD010000002;X63253;XM_032913497 CAA44913;XP_032769388 serotonin transporter;sodium-dependent serotonin transporter protein-coding 625960517 LOC116910587 WAP four-disulfide core domain protein 18-like 9 86968769 86969814 - 22301074;30032202 116910587 MODEL JAAIVD010000002;XM_032914509 XP_032770400 protein-coding 625960521 Tlr4 toll like receptor 4 ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); astrocyte development (ortholog); B cell proliferation involved in immune response (ortholog); PARTICIPATES IN titanium dioxide nanoparticle response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acanthamoeba Keratitis (ortholog); Acne Conglobata (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 1 86484628 86497678 - 22301074;30032202 116901185 U5LHW2 MODEL JAAIVD010000025;KC811694;KC811695;KC811696;XM_032902869 AGX25489;AGX25490;AGX25491;XP_032758760 toll-like receptor 4 protein-coding 625960528 Tle3 TLE family member 3, transcriptional corepressor INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Neoplasms (ortholog); rheumatoid arthritis (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 55674852 55720224 + 22301074;30032202 116906636 MODEL JAAIVD010000027;XM_032909408;XM_032909409;XM_032909410;XM_032909411;XM_032909412;XM_032909413 XP_032765299;XP_032765300;XP_032765301;XP_032765302;XP_032765303;XP_032765304 transducin-like enhancer protein 3 protein-coding 625960563 Rgs17 regulator of G protein signaling 17 INVOLVED IN response to amphetamine (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 2 197004544 197040037 + 116892873 MODEL JAAIVD010000001;XM_032894780 XP_032750671 regulator of G-protein signaling 17 protein-coding 625960571 LOC116883507 uncharacterized LOC116883507 14 58027225 58031294 + 116883507 MODEL JAAIVD010000009;XR_004385767 ncrna 625960576 LOC116885850 polypeptide N-acetylgalactosaminyltransferase 12-like 16 3242372 3253482 - 116885850 MODEL JAAIVD010000004 pseudo 625960577 LOC116898095 transmembrane protein 258-like 4 95638486 95638718 - 116898095 MODEL JAAIVD010000003 pseudo 625960578 Kdm5c lysine demethylase 5C ENCODES a protein that exhibits histone H3K4 demethylase activity (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to toxic substance (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 13383605 13422272 + 22301074;30032202 116889368 MODEL JAAIVD010000014;XM_032890474 XP_032746365 lysine-specific demethylase 5C protein-coding 625960608 Arap2 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog) 11 42937768 43069495 - 22301074 116911949 MODEL JAAIVD010000006;XM_032915862;XM_032915864 XP_032771753;XP_032771755 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 2 protein-coding 625960642 Smarcad1 SNF2 related chromatin remodeling ATPase with DExD box 1 ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); chromosome separation (ortholog); DNA double-strand break processing (ortholog); ASSOCIATED WITH adermatoglyphia (ortholog); asphyxiating thoracic dystrophy (ortholog); BASAN syndrome (ortholog); FOUND IN heterochromatin (ortholog); nuclear replication fork (ortholog); nucleoplasm (ortholog) 6 77628152 77692488 + 22301074;30032202 116903715 MODEL JAAIVD010000024;XM_032906389;XM_032906390 XP_032762280;XP_032762281 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1;SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1 protein-coding 625960675 Capsl calcyphosine like ASSOCIATED WITH autistic disorder (ortholog); exudative vitreoretinopathy (ortholog) 3 171220120 171248469 - 22301074 116897132 MODEL JAAIVD010000012;XM_032898794 XP_032754685 calcyphosin-like protein protein-coding 625960684 LOC116886004 small nucleolar RNA SNORA17 16 23984674 23984807 + 116886004 MODEL JAAIVD010000004;XR_004386076 snorna 625960687 LOC116900896 olfactory receptor 4A47-like 5 71298381 71299361 - 116900896 MODEL JAAIVD010000023 pseudo 625960688 Fmo1 flavin containing dimethylaniline monoxygenase 1 ENCODES a protein that exhibits hypotaurine monooxygenase activity (ortholog); monooxygenase activity (ortholog); N,N-dimethylaniline monooxygenase activity (ortholog); INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); organic acid metabolic process (ortholog); PARTICIPATES IN tamoxifen pharmacodynamics pathway; tamoxifen pharmacokinetics pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autism spectrum disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 10 42094309 42119698 - 22301074;30032202 116911110 MODEL JAAIVD010000005;XM_032914950 XP_032770841 dimethylaniline monooxygenase [N-oxide-forming] 1 protein-coding 625960700 Ptpn23 protein tyrosine phosphatase non-receptor type 23 ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER AND STRUCTURAL BRAIN ANOMALIES WITH OR WITHOUT SEIZURES AND SPASTICITY (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 8 100971200 100990905 - 22301074;30032202 116907666 MODEL JAAIVD010000027;XM_032910757;XM_032910759 XP_032766648;XP_032766650 tyrosine-protein phosphatase non-receptor type 23 protein-coding 625960732 Dkc1 dyskerin pseudouridine synthase 1 ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); pseudouridine synthase activity (ortholog); RNA binding (ortholog); INVOLVED IN box H/ACA sno(s)RNA metabolic process (ortholog); enzyme-directed rRNA pseudouridine synthesis (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH anemia (ortholog); aplastic anemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); Cajal body (ortholog) Y 1545204 1559303 + 22301074;30032202 116889610 MODEL JAAIVD010000015;XM_032890538 XP_032746429 H/ACA ribonucleoprotein complex subunit DKC1 protein-coding 625960747 LOC116898229 28S ribosomal protein S36, mitochondrial-like 4 148232449 148233066 + 22301074;30032202 116898229 MODEL JAAIVD010000003;XM_032899584 XP_032755475 protein-coding 625960751 Tff1 trefoil factor 1 INVOLVED IN cell differentiation (ortholog); maintenance of gastrointestinal epithelium (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); Acute Lung Injury (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog) 18 2714155 2717891 + 30032202 116887523 MODEL JAAIVD010000013;XM_032889147 XP_032745038 protein-coding 625960758 Slc6a1 solute carrier family 6 member 1 ENCODES a protein that exhibits amino acid:sodium symporter activity (ortholog); gamma-aminobutyric acid transmembrane transporter activity (ortholog); gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); INVOLVED IN associative learning (ortholog); chloride transmembrane transport (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); GABA-ergic synapse (ortholog) 6 32204334 32219133 - 22301074;30032202 116903394 MODEL JAAIVD010000024;XM_032905896 XP_032761787 sodium- and chloride-dependent GABA transporter 1 protein-coding 625960777 Vdr vitamin D receptor ENCODES a protein that exhibits bile acid nuclear receptor activity (ortholog); calcitriol binding (ortholog); DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN altered p53 signaling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); alopecia (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN caveola (ortholog); chromatin (ortholog); cytosol (ortholog) 1 270672487 270722864 - 22301074;30032202 116884591 MODEL JAAIVD010000025;XM_032885736 XP_032741627 vitamin D3 receptor protein-coding 625960791 LOC116906190 CD2 antigen cytoplasmic tail-binding protein 2-like 7 116574554 116575351 - 116906190 MODEL JAAIVD010000026 pseudo 625960792 LOC116889640 Y-linked testis-specific protein 1-like 116889640 MODEL JAAIVD010000021 pseudo 625960793 Cdcp2 CUB domain containing protein 2 1 47699631 47716035 - 116890733 MODEL JAAIVD010000025;XM_032891227 XP_032747118 CUB domain-containing protein 2 protein-coding 625960801 LOC116894334 mas-related G-protein coupled receptor member B8-like 2 152051095 152052079 + 116894334 MODEL JAAIVD010000001 pseudo 625960802 LOC116900501 olfactory receptor 4A15-like 5 71986886 71987839 - 22301074 116900501 MODEL JAAIVD010000023;XM_032902236 XP_032758127 protein-coding 625960805 LOC116891987 heat shock cognate 71 kDa protein-like 2 133538186 133540303 + 116891987 MODEL JAAIVD010000001 pseudo 625960806 LOC116894580 T-complex protein 1 subunit zeta-like 2 180369382 180370924 - 116894580 MODEL JAAIVD010000001 pseudo 625960807 Rprm reprimo, TP53 dependent G2 arrest mediator homolog INVOLVED IN regulation of cell cycle (ortholog); regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH Barrett's esophagus (ortholog); Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 5 31705604 31707431 - 30032202 116901413 MODEL JAAIVD010000023;XM_032903302 XP_032759193 protein reprimo protein-coding 625960812 Cep170b centrosomal protein 170B ASSOCIATED WITH congenital heart disease (ortholog) 7 130313833 130337497 + 22301074 116905518 MODEL JAAIVD010000026;XM_032908541 XP_032764432 centrosomal protein of 170 kDa protein B protein-coding 625960835 LOC116895638 coenzyme Q-binding protein COQ10 homolog B, mitochondrial-like 3 176828631 176829356 + 116895638 MODEL JAAIVD010000012 pseudo 625960836 LOC116906502 U2 spliceosomal RNA 7 102943464 102943638 - 116906502 MODEL JAAIVD010000026 pseudo 625960837 LOC116886902 60S ribosomal protein L21-like 18 24801523 24802010 - 116886902 MODEL JAAIVD010000013 pseudo 625960838 Smim4 small integral membrane protein 4 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 6823288 6827139 - 116914511 MODEL JAAIVD010000008;XM_032918835 XP_032774726 protein-coding 625960844 LOC116892249 meiosis regulator and mRNA stability factor 1-like 2 160318669 160352160 - 22301074;30032202 116892249 MODEL JAAIVD010000001;XM_032893820 XP_032749711 protein-coding 625960869 LOC116896086 uncharacterized LOC116896086 3 215680068 215681250 + 22301074;30032202 116896086 MODEL JAAIVD010000012;XM_032897064 XP_032752955 uncharacterized protein LOC116896086 protein-coding 625960874 LOC116886579 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 17 39232075 39232527 - 116886579 MODEL JAAIVD010000011 pseudo 625960875 Rbbp8nl RBBP8 N-terminal like 5 157356024 157362767 - 30032202 116902408 MODEL JAAIVD010000023;XM_032904937 XP_032760828 RBBP8 N-terminal-like protein protein-coding 625960890 LOC116892801 zinc finger protein 54-like 2 185984316 186019571 + 22301074 116892801 MODEL JAAIVD010000001;XM_032894674 XP_032750565 protein-coding 625960900 LOC116894843 U6 spliceosomal RNA 2 100724717 100724823 + 116894843 MODEL JAAIVD010000001;XR_004387058 snrna 625960903 Krt40 keratin 40 9 54367730 54373716 - 22301074;30032202 116909405 MODEL JAAIVD010000002;XM_032912971;XM_032912972 XP_032768862;XP_032768863 keratin, type I cytoskeletal 40 protein-coding 625960913 Krt79 keratin 79 ENCODES a protein that exhibits enzyme binding (ortholog) 1 261138933 261150715 + 22301074;30032202 116890200 MODEL JAAIVD010000025;XM_032890934 XP_032746825 keratin, type II cytoskeletal 79 protein-coding 625960925 Ttc9b tetratricopeptide repeat domain 9B 2 168286987 168289358 - 22301074 116892419 MODEL JAAIVD010000001;XM_032894100 XP_032749991 tetratricopeptide repeat protein 9B protein-coding 625960932 Tor1a torsin family 1 member A ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent protein folding chaperone (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); ERAD pathway (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-5 (ortholog); Contracture (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 5 4649817 4656552 + 22301074;30032202 116901172 MODEL JAAIVD010000023;XM_032902831;XM_032902832 XP_032758722;XP_032758723 torsin-1A protein-coding 625960946 Rhod ras homolog family member D ENCODES a protein that exhibits GTP binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); cell projection assembly (ortholog); FOUND IN cell projection (ortholog) 2 3218793 3232438 + 22301074;30032202 116890770 MODEL JAAIVD010000001;XM_032891237 XP_032747128 rho-related GTP-binding protein RhoD protein-coding 625960955 LOC116894131 olfactory receptor 52E8-like 2 103955535 103956476 - 22301074 116894131 MODEL JAAIVD010000001;XM_032895850 XP_032751741 protein-coding 625960958 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 21612325 21612396 - 116906531 MODEL JAAIVD010000026 trna 625960959 LOC116908259 IQ domain-containing protein F5-like 8 97865850 97867983 - 30032202 116908259 MODEL JAAIVD010000027;XM_032911512 XP_032767403 protein-coding 625960964 Smo smoothened, frizzled class receptor ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); oxysterol binding (ortholog); patched binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); astrocyte activation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Adenomatous Polyps (ortholog); ameloblastoma (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); axonal growth cone (ortholog); caveola (ortholog) 6 109801241 109824295 - 22301074;30032202 116904008 MODEL JAAIVD010000024;XM_032906824 XP_032762715 smoothened homolog protein-coding 625960980 Rab27a RAB27A, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); blood coagulation (ortholog); complement-dependent cytotoxicity (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Congenital Abnormalities (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); dendrite (ortholog); exocytic vesicle (ortholog) 8 67413718 67435525 + 22301074;30032202 116907699 MODEL JAAIVD010000027;XM_032910811 XP_032766702 ras-related protein Rab-27A protein-coding 625960989 LOC116910358 probable E3 ubiquitin-protein ligase MARCH10 9 73701403 73729857 + 22301074 116910358 MODEL JAAIVD010000002;XM_032914212 XP_032770103 protein-coding 625960997 LOC116912051 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like 11 89401263 89401828 + 116912051 MODEL JAAIVD010000006 pseudo 625960998 Pdlim1 PDZ and LIM domain 1 ENCODES a protein that exhibits actin binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment or maintenance of actin cytoskeleton polarity (ortholog); fibroblast migration (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 2 39352546 39399052 - 30032202 116891147 MODEL JAAIVD010000001;XM_032891898 XP_032747789 PDZ and LIM domain protein 1 protein-coding 625961009 Nt5c3b 5'-nucleotidase, cytosolic IIIB 9 59731754 59744819 - 22301074;30032202 116910622 MODEL JAAIVD010000002;XM_032914571 XP_032770462 7-methylguanosine phosphate-specific 5'-nucleotidase protein-coding 625961022 LOC116897526 small nucleolar RNA SNORA48 3 207040541 207040684 - 116897526 MODEL JAAIVD010000012;XR_004387542 snorna 625961025 Uba1 ubiquitin like modifier activating enzyme 1 ENCODES a protein that exhibits ubiquitin activating enzyme activity (ortholog); INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH genetic disease (ortholog); squamous cell carcinoma (ortholog); VEXAS syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); desmosome (ortholog) X 3162579 3183986 - 30032202 116888430 MODEL JAAIVD010000014;XM_032889706 XP_032745597 ubiquitin-like modifier-activating enzyme 1 protein-coding 625961056 Tle5 TLE family member 5, transcriptional modulator ENCODES a protein that exhibits identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH colon cancer (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN nucleus (ortholog) 1 153325108 153331921 - 22301074;30032202 116904183 MODEL JAAIVD010000025;XM_032907094;XM_032907102 XP_032762985;XP_032762993 TLE family member 5 protein-coding 625961071 Fadd Fas associated via death domain ENCODES a protein that exhibits caspase binding (ortholog); death effector domain binding (ortholog); death receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN ceramide signaling pathway; FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Lung Injury (ortholog); acute myeloid leukemia (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cell body (ortholog); cytoplasm (ortholog) 2 5142335 5145109 + 22301074 116890820 MODEL JAAIVD010000001;XM_032891318 XP_032747209 FAS-associated death domain protein protein-coding 625961077 Paox polyamine oxidase ENCODES a protein that exhibits polyamine oxidase activity (ortholog); INVOLVED IN polyamine catabolic process (ortholog); positive regulation of spermidine biosynthetic process (ortholog); putrescine biosynthetic process (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); lung non-small cell carcinoma (ortholog); Stroke (ortholog); FOUND IN peroxisomal matrix (ortholog) 2 61736878 61745408 - 30032202 116891351 MODEL JAAIVD010000001;XM_032892343;XM_032892344 XP_032748234;XP_032748235 peroxisomal N(1)-acetyl-spermine/spermidine oxidase protein-coding 625961089 Stat2 signal transducer and activator of transcription 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); defense response to virus (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; Jak-Stat signaling pathway; ASSOCIATED WITH Arenaviridae infectious disease (ortholog); Bunyaviridae Infections (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ISGF3 complex (ortholog) 1 155746623 155762131 + 30032202 116905961 MODEL JAAIVD010000025;XM_032908970 XP_032764861 protein-coding 625961117 LOC116909310 olfactory receptor 10-like 9 32091731 32092666 + 22301074 116909310 MODEL JAAIVD010000002;XM_032912850 XP_032768741 protein-coding 625961120 Acvrl1 activin A receptor like type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery development (ortholog); blood circulation (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 1 261949088 261965955 - 22301074;30032202 116883818 MODEL JAAIVD010000025;XM_032885075;XM_032885082;XM_032885091 XP_032740966;XP_032740973;XP_032740982 serine/threonine-protein kinase receptor R3 protein-coding 625961141 Tmc6 transmembrane channel like 6 INVOLVED IN intracellular zinc ion homeostasis (ortholog); protein stabilization (ortholog); ASSOCIATED WITH epidermodysplasia verruciformis (ortholog); Epidermodysplasia Verruciformis 1 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 9 66288081 66305839 + 30032202 116910341 MODEL JAAIVD010000002;XM_032914197 XP_032770088 transmembrane channel-like protein 6 protein-coding 625961165 Plac8l1 PLAC8 like 1 15 3354913 3371797 - 116884806 MODEL JAAIVD010000010;XM_032886038 XP_032741929 PLAC8-like protein 1 protein-coding 625961173 Tatdn3 TatD DNase domain containing 3 ENCODES a protein that exhibits DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); FOUND IN mitochondrion (ortholog) 10 69133711 69148777 - 22301074 116911241 MODEL JAAIVD010000005;XM_032915144 XP_032771035 putative deoxyribonuclease TATDN3 protein-coding 625961187 Ube2d3 ubiquitin conjugating enzyme E2 D3 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to mercury ion (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; nuclear factor kappa B signaling pathway 3 23618659 23649804 - 30032202 116896224 MODEL JAAIVD010000012;XM_032897279;XM_032897280;XM_032897281 XP_032753170;XP_032753171;XP_032753172 ubiquitin-conjugating enzyme E2 D3 protein-coding 625961205 LOC116913748 olfactory receptor 4K1-like 12 73082236 73083172 + 22301074 116913748 MODEL JAAIVD010000007;XM_032918056 XP_032773947 protein-coding 625961208 LOC116887970 60S ribosomal protein L38-like X 66519057 66520560 + 22301074;30032202 116887970 MODEL JAAIVD010000014;XM_032889409 XP_032745300 protein-coding 625961212 LOC116911580 inactive dipeptidyl peptidase 10-like 10 16488261 16676549 - 116911580 MODEL JAAIVD010000005;XM_032915562 XP_032771453 protein-coding 625961219 LOC116883443 transmembrane emp24 domain-containing protein 2-like 1 200548060 200550640 - 116883443 MODEL JAAIVD010000025 pseudo 625961220 LOC116883956 10 kDa heat shock protein, mitochondrial-like 14 20599728 20617797 - 116883956 MODEL JAAIVD010000009 pseudo 625961221 LOC116910024 T-complex protein 1 subunit zeta-like 9 54518849 54520436 + 116910024 MODEL JAAIVD010000002 pseudo 625961222 Mgrn1 mahogunin ring finger 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); heart development (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH hyperglycemia (ortholog); hyperinsulinism (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endoplasmic reticulum (ortholog) 9 16967736 17016963 - 30032202 116909817 MODEL JAAIVD010000002;XM_032913520;XM_032913521;XM_032913523;XM_032913524;XM_032913525;XM_032913526;XM_032913527;XM_032913528;XM_032913529 XP_032769411;XP_032769412;XP_032769414;XP_032769415;XP_032769416;XP_032769417;XP_032769418;XP_032769419;XP_032769420 E3 ubiquitin-protein ligase MGRN1 protein-coding 625961261 Gpn3 GPN-loop GTPase 3 FOUND IN protein-containing complex (ortholog) 16 31466424 31474988 - 30032202 116885398 MODEL JAAIVD010000004;XM_032886678;XM_032886679 XP_032742569;XP_032742570 protein-coding 625961276 Hmgb1 high mobility group box 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); bent DNA binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of innate immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN cisplatin drug pathway; mismatch repair pathway; pro-inflammatory cytokine mediated pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); cell surface (ortholog); chromatin (ortholog) 16 4798441 4801625 + 30032202 116885400 MODEL JAAIVD010000004;XM_032886681 XP_032742572 high mobility group protein B1 protein-coding 625961283 LOC116911446 heat shock cognate 71 kDa protein-like 10 21985002 21986851 + 116911446 MODEL JAAIVD010000005 pseudo 625961284 Ankrd46 ankyrin repeat domain 46 1 209996961 210015985 - 22301074 116910594 MODEL JAAIVD010000025;XM_032914523;XM_032914531;XM_032914541 XP_032770414;XP_032770422;XP_032770432 ankyrin repeat domain-containing protein 46 protein-coding 625961299 Ythdc1 YTH N6-methyladenosine RNA binding protein C1 ENCODES a protein that exhibits N6-methyladenosine-containing RNA reader activity (ortholog); RNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); dosage compensation by inactivation of X chromosome (ortholog); in utero embryonic development (ortholog); FOUND IN nuclear body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 11 112539 143830 - 30032202 116911950 MODEL JAAIVD010000006;XM_032915865;XM_032915866;XM_032915867;XM_032915868;XM_032915869;XM_032915870;XM_032915871 XP_032771756;XP_032771757;XP_032771758;XP_032771759;XP_032771760;XP_032771761;XP_032771762 YTH domain containing 1;YTH domain-containing protein 1 protein-coding 625961337 Rad54l2 RAD54 like 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 8 97985766 98086521 - 22301074;30032202 116907498 MODEL JAAIVD010000027;XM_032910492;XM_032910493;XM_032910494 XP_032766383;XP_032766384;XP_032766385 helicase ARIP4 protein-coding 625961371 Slc13a2 solute carrier family 13 member 2 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); fumarate transmembrane transporter activity (ortholog); sodium:dicarboxylate symporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); cellular response to lithium ion (ortholog); fumarate transport (ortholog); FOUND IN apical plasma membrane (ortholog) 9 92014918 92041622 + 22301074;30032202 116909017 MODEL JAAIVD010000002;XM_032912491;XM_032912493 XP_032768382;XP_032768384 protein-coding 625961389 LOC116899871 U1 spliceosomal RNA 4 151111780 151111941 - 116899871 MODEL JAAIVD010000003;XR_004387865 snrna 625961392 Atp6v1h ATPase H+ transporting V1 subunit H INVOLVED IN endocytosis (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) 1 140400281 140484174 + 22301074;30032202 116903738 MODEL JAAIVD010000025;XM_032906425;XM_032906433;XM_032906440 XP_032762316;XP_032762324;XP_032762331 V-type proton ATPase subunit H protein-coding 625961414 LOC116899822 small nucleolar RNA SNORA2/SNORA34 family 4 53660169 53660302 - 116899822 MODEL JAAIVD010000003;XR_004387822 snorna 625961417 Tnp1 transition protein 1 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); flagellated sperm motility (ortholog); heterochromatin formation (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleosome (ortholog); nucleus (ortholog) 4 146516184 146516786 - 22301074;30032202 116898215 MODEL JAAIVD010000003;XM_032899574;XM_032899575 XP_032755465;XP_032755466 spermatid nuclear transition protein 1 protein-coding 625961426 LOC116894030 olfactory receptor 52Z1-like 2 102060265 102064614 - 22301074 116894030 MODEL JAAIVD010000001;XM_032895747;XM_032895748 XP_032751638;XP_032751639 protein-coding 625961432 LOC116910759 U4 spliceosomal RNA 9 73495907 73496058 - 116910759 MODEL JAAIVD010000002 pseudo 625961433 LOC116885115 small nucleolar RNA SNORA36 family 15 79225912 79226069 - 116885115 MODEL JAAIVD010000010 pseudo 625961434 LOC116889851 uncharacterized LOC116889851 1 152942259 152944008 + 116889851 MODEL JAAIVD010000025;XR_004386515 ncrna 625961439 Ppp1r18 protein phosphatase 1 regulatory subunit 18 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 18 9076590 9086433 + 22301074 116887472 MODEL JAAIVD010000013;XM_032889082;XM_032889083;XM_032889084 XP_032744973;XP_032744974;XP_032744975 phostensin protein-coding 625961454 Upf2 UPF2 regulator of nonsense mediated mRNA decay ENCODES a protein that exhibits telomeric DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); liver development (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 14 12285259 12376107 + 22301074;30032202 116884030 MODEL JAAIVD010000009;XM_032885264 XP_032741155 regulator of nonsense transcripts 2 protein-coding 625961476 Aspm assembly factor for spindle microtubules ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN brain development (ortholog); cerebral cortex development (ortholog); developmental growth (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); COVID-19 (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN apical plasma membrane (ortholog); centrosome (ortholog); cytoplasm (ortholog) 10 19816086 19854168 + 22301074 116911237 MODEL JAAIVD010000005;XM_032915137 XP_032771028 abnormal spindle-like microcephaly-associated protein protein-coding 625961502 Notch4 notch receptor 4 ENCODES a protein that exhibits Notch binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); endothelial cell differentiation (ortholog); endothelial cell morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); alopecia areata (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog) 18 7248399 7271499 + 22301074;30032202 116886823 MODEL JAAIVD010000013;XM_032888256 XP_032744147 neurogenic locus notch homolog protein 4 protein-coding 625961536 Pilra paired immunoglobin like type 2 receptor alpha INVOLVED IN signal transduction (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog) 16 16190184 16203968 + 30032202 116885775 MODEL JAAIVD010000004;XM_032887096 XP_032742987 paired immunoglobulin-like type 2 receptor alpha protein-coding 625961547 LOC116912127 ran guanine nucleotide release factor-like 11 34152055 34152612 + 30032202 116912127 MODEL JAAIVD010000006;XM_032916036 XP_032771927 protein-coding 625961550 Galnt18 polypeptide N-acetylgalactosaminyltransferase 18 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog) 2 89677395 89980849 + 30032202 116891652 MODEL JAAIVD010000001;XM_032892898 XP_032748789 protein-coding 625961565 LOC116911420 ubiquitin-conjugating enzyme E2 variant 1-like 10 78689063 78689506 + 116911420 MODEL JAAIVD010000005;XM_032915385;XM_032915386 XP_032771276;XP_032771277 protein-coding 625961571 Setd3 SET domain containing 3, actin N3(tau)-histidine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); protein-L-histidine N-tele-methyltransferase activity (ortholog); INVOLVED IN actin modification (ortholog); peptidyl-histidine methylation (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog) 7 125784620 125850699 - 22301074;30032202 116905447 MODEL JAAIVD010000026;XM_032908397 XP_032764288 SET domain containing 3, actin histidine methyltransferase;actin-histidine N-methyltransferase protein-coding 625961588 Cfap69 cilia and flagella associated protein 69 INVOLVED IN flagellated sperm motility (ortholog); olfactory behavior (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH spermatogenic failure 24 (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); sperm midpiece (ortholog) 6 137837427 137908247 - 30032202 116904132 MODEL JAAIVD010000024;XM_032907018;XM_032907020;XM_032907021;XM_032907022 XP_032762909;XP_032762911;XP_032762912;XP_032762913 cilia- and flagella-associated protein 69 protein-coding 625961622 LOC116884594 uncharacterized LOC116884594 15 30312436 30350925 - 116884594 MODEL JAAIVD010000010;XR_004385886 ncrna 625961627 Il10ra interleukin 10 receptor subunit alpha ENCODES a protein that exhibits interleukin-10 binding (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); intestinal epithelial structure maintenance (ortholog); negative regulation of autophagy (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Crohn's disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN apical plasma membrane (ortholog); cilium (ortholog); cytosol (ortholog) 8 39788184 39802642 - 22301074 116907772 MODEL JAAIVD010000027;XM_032910913 XP_032766804 interleukin-10 receptor subunit alpha protein-coding 625961638 Slain2 SLAIN motif family member 2 INVOLVED IN cytoplasmic microtubule organization (ortholog); microtubule nucleation (ortholog); positive regulation of microtubule polymerization (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 11 29719841 29778579 + 30032202 116912861 MODEL JAAIVD010000006;XM_032917075;XM_032917076;XM_032917077 XP_032772966;XP_032772967;XP_032772968 SLAIN motif-containing protein 2 protein-coding 625961656 LOC116885100 U7 small nuclear RNA 15 24179378 24179433 - 116885100 MODEL JAAIVD010000010 pseudo 625961657 LOC116914362 ADP/ATP translocase 2-like 13 74735756 74751169 - 116914362 MODEL JAAIVD010000008 pseudo 625961658 Mettl5 methyltransferase 5, N6-adenosine ENCODES a protein that exhibits rRNA (adenine-N6-)-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN positive regulation of translation (ortholog); rRNA methylation (ortholog); rRNA processing (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 72 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 5 47162474 47174106 - 22301074;30032202 116901491 MODEL JAAIVD010000023;XM_032903460 XP_032759351 methyltransferase like 5;methyltransferase-like protein 5 protein-coding 625961669 LOC116893054 renalase-like 2 33177167 33210680 - 30032202 116893054 MODEL JAAIVD010000001;XM_032895016 XP_032750907 protein-coding 625961675 LOC116884866 protocadherin beta-14-like 15 1133262 1138952 + 22301074 116884866 MODEL JAAIVD010000010;XM_032886105 XP_032741996 protein-coding 625961680 LOC116887759 U6 spliceosomal RNA 18 19588393 19588494 + 116887759 MODEL JAAIVD010000013;XR_004386259 snrna 625961683 Lrrc74b leucine rich repeat containing 74B 4 2796740 2813971 - 22301074 116898644 MODEL JAAIVD010000003;XM_032899870 XP_032755761 leucine-rich repeat-containing protein 74B protein-coding 625961695 LOC116889365 transmembrane protein 256-like X 19320945 19321372 + 116889365 MODEL JAAIVD010000014 pseudo 625961696 Usp3 ubiquitin specific peptidase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); histone binding (ortholog); histone H2A deubiquitinase activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH atrial fibrillation (ortholog); lymphopenia (ortholog); neutropenia (ortholog); FOUND IN chromatin (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); Flemming body (ortholog) 8 60875693 60948329 - 22301074;30032202 116908034 MODEL JAAIVD010000027;XM_032911303;XM_032911304 XP_032767194;XP_032767195 ubiquitin carboxyl-terminal hydrolase 3 protein-coding 625961718 LOC116898341 Down syndrome cell adhesion molecule homolog 4 47958055 48014096 + 22301074;30032202 116898341 MODEL JAAIVD010000003;XM_032899664 XP_032755555 protein-coding 625961728 LOC116887708 patr class I histocompatibility antigen, A-126 alpha chain-like 18 9606776 9608939 - 116887708 MODEL JAAIVD010000013 pseudo 625961729 Arhgef3 Rho guanine nucleotide exchange factor 3 13 2843602 3125354 + 22301074;30032202 116914384 MODEL JAAIVD010000008;XM_032918596;XM_032918597;XM_032918598;XM_032918599 XP_032774487;XP_032774488;XP_032774489;XP_032774490 protein-coding 625961755 LOC116890450 small nucleolar RNA SNORA16B/SNORA16A family 1 25940426 25940561 - 116890450 MODEL JAAIVD010000025;XR_004386642 snorna 625961758 Otor otoraplin INVOLVED IN cartilage condensation (ortholog) 5 122561584 122564913 + 22301074;30032202 116900658 MODEL JAAIVD010000023;XM_032902363 XP_032758254 protein-coding 625961766 Mosmo modulator of smoothened INVOLVED IN embryonic limb morphogenesis (ortholog); embryonic skeletal system development (ortholog); gene expression (ortholog); FOUND IN ciliary membrane (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 2 81057583 81116569 - 30032202 116891580 MODEL JAAIVD010000001;XM_032892760 XP_032748651 modulator of smoothened protein protein-coding 625961773 LOC116884104 U2 spliceosomal RNA 14 28114503 28114641 + 116884104 MODEL JAAIVD010000009 pseudo 625961774 LOC116915061 60S ribosomal protein L21-like 13 53056113 53061840 + 116915061 MODEL JAAIVD010000008 pseudo 625961775 LOC116894431 protein FAM32A-like 2 160260568 160260969 + 30032202 116894431 MODEL JAAIVD010000001;XM_032896136 XP_032752027 protein-coding 625961780 Tmem209 transmembrane protein 209 6 109051475 109078406 + 30032202 116904000 MODEL JAAIVD010000024;XM_032906806;XM_032906807;XM_032906808;XM_032906809 XP_032762697;XP_032762698;XP_032762699;XP_032762700 protein-coding 625961807 LOC116888298 kelch domain-containing protein 2-like X 60547266 60548776 + 22301074 116888298 MODEL JAAIVD010000014;XM_032889570 XP_032745461 protein-coding 625961813 Cxcl17 C-X-C motif chemokine ligand 17 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN macrophage chemotaxis (ortholog); negative regulation of inflammatory response (ortholog); neutrophil chemotaxis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular space (ortholog) 2 169307233 169318493 + 30032202 116892457 MODEL JAAIVD010000001;XM_032894173 XP_032750064 C-X-C motif chemokine 17 protein-coding 625961821 Lrcol1 leucine rich colipase like 1 16 44005016 44016846 - 22301074;30032202 116885659 MODEL JAAIVD010000004;XM_032886963 XP_032742854 leucine-rich colipase-like protein 1 protein-coding 625961831 Gpatch8 G-patch domain containing 8 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN hemopoiesis (ortholog); mRNA splicing, via spliceosome (ortholog) 9 61770988 61849041 - 22301074;30032202 116909879 MODEL JAAIVD010000002;XM_032913618 XP_032769509 G patch domain-containing protein 8 protein-coding 625961843 LOC116907551 PCNA-associated factor-like 8 99202590 99203063 + 116907551 MODEL JAAIVD010000027 pseudo 625961844 E2f1 E2F transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN anoikis (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 5 133928146 133947590 - 22301074;30032202 116901050 MODEL JAAIVD010000023;XM_032902631 XP_032758522 transcription factor E2F1 protein-coding 625961856 LOC116889714 enolase-like 22301074;30032202 116889714 MODEL JAAIVD010000061;XM_032890593 XP_032746484 protein-coding 625961857 LOC116899033 uncharacterized LOC116899033 4 56814764 56831504 + 116899033 MODEL JAAIVD010000003;XR_004387683 ncrna 625961861 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60945866 60945939 - 116897692 MODEL JAAIVD010000012 trna 625961862 LOC116898216 uncharacterized LOC116898216 4 146524760 146525630 + 116898216 MODEL JAAIVD010000003;XR_004387643 ncrna 625961866 LOC116890177 60S ribosomal protein L9-like 1 258945582 258946114 - 116890177 MODEL JAAIVD010000025 pseudo 625961867 B3galt4 beta-1,3-galactosyltransferase 4 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog) 18 6956313 6957895 - 22301074;30032202 116887072 MODEL JAAIVD010000013;XM_032888577 XP_032744468 protein-coding 625961872 LOC116907180 probable inactive ribonuclease-like protein 13 8 900914 901415 - 116907180 MODEL JAAIVD010000027 pseudo 625961873 LOC116883689 keratin, type II cytoskeletal 75 1 261496617 261505661 + 22301074;30032202 116883689 MODEL JAAIVD010000025;XM_032884906 XP_032740797 protein-coding 625961885 Slc35a3 solute carrier family 35 member A3 ENCODES a protein that exhibits UDP-galactose transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); Arthrogryposis, Impaired Intellectual Development, and Seizures (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 43017139 43055965 + 22301074;30032202 116896329 MODEL JAAIVD010000012;XM_032897426;XM_032897427 XP_032753317;XP_032753318 UDP-N-acetylglucosamine transporter protein-coding 625961900 LOC116900468 olfactory receptor 4A5-like 5 71363963 71364883 - 22301074 116900468 MODEL JAAIVD010000023;XM_032902204 XP_032758095 protein-coding 625961903 Usp8 ubiquitin specific peptidase 8 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); endosome organization (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); esophagus squamous cell carcinoma (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN acrosomal membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 105555495 105593457 + 22301074;30032202 116901919 MODEL JAAIVD010000023;XM_032904140 XP_032760031 ubiquitin carboxyl-terminal hydrolase 8 protein-coding 625961925 Insl5 insulin like 5 INVOLVED IN positive regulation of feeding behavior (ortholog) 1 51554224 51556261 + 116891153 MODEL JAAIVD010000025;XM_032891985 XP_032747876 insulin-like peptide INSL5 protein-coding 625961929 LOC116910702 uncharacterized LOC116910702 1 211304509 211310051 + 22301074 116910702 MODEL JAAIVD010000025;XM_032914584 XP_032770475 uncharacterized protein LOC116910702 protein-coding 625961935 LOC116909385 olfactory receptor 1361-like 9 38268184 38269125 - 22301074;30032202 116909385 MODEL JAAIVD010000002;XM_032912940 XP_032768831 protein-coding 625961938 LOC116902853 olfactory receptor 13 6 97485122 97486054 - 22301074 116902853 MODEL JAAIVD010000024;XM_032905181 XP_032761072 protein-coding 625961941 LOC116894323 prostatic steroid-binding protein C1 2 151398002 151401008 - 116894323 MODEL JAAIVD010000001;XM_032896017 XP_032751908 protein-coding 625961948 Ceacam19 CEA cell adhesion molecule 19 2 170725020 170733421 + 116892514 MODEL JAAIVD010000001;XM_032894269 XP_032750160 carcinoembryonic antigen-related cell adhesion molecule 19 protein-coding 625961959 Znf197 zinc finger protein 197 8 114038624 114052298 + 30032202 116908275 MODEL JAAIVD010000027;XM_032911520 XP_032767411 protein-coding 625961970 LOC116890624 U1 spliceosomal RNA 1 248354377 248354536 + 116890624 MODEL JAAIVD010000025;XR_004386769 snrna 625961973 Ticam1 toll like receptor adaptor molecule 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Herpes Simplex Encephalitis (ortholog); Herpes Simplex Encephalitis 4 (ortholog); pneumoconiosis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) 4 87661536 87664438 - 30032202 116899178 MODEL JAAIVD010000003;XM_032900748 XP_032756639 TIR domain-containing adapter molecule 1 protein-coding 625961978 Styk1 serine/threonine/tyrosine kinase 1 FOUND IN plasma membrane (ortholog) 6 16915728 16928340 + 22301074;30032202 116903182 MODEL JAAIVD010000024;XM_032905552 XP_032761443 tyrosine-protein kinase STYK1 protein-coding 625961991 LOC116889496 small nucleolar RNA SNORA48 X 102864533 102864676 + 116889496 MODEL JAAIVD010000014;XR_004386445 snorna 625961994 Fam131a family with sequence similarity 131 member A 4 5514290 5523916 + 116898703 MODEL JAAIVD010000003;XM_032899974;XM_032899975;XM_032899976;XM_032899977 XP_032755865;XP_032755866;XP_032755867;XP_032755868 protein FAM131A protein-coding 625962014 LOC116888023 glutamic acid-rich protein-like X 80912707 80913272 + 116888023 MODEL JAAIVD010000014;XM_032889432 XP_032745323 protein-coding 625962018 LOC116894596 vomeronasal type-1 receptor 2-like 2 181467333 181468277 - 22301074;30032202 116894596 MODEL JAAIVD010000001;XM_032896313 XP_032752204 protein-coding 625962022 Muc21 mucin 21, cell surface associated INVOLVED IN negative regulation of cell-cell adhesion (ortholog); negative regulation of cell-substrate adhesion (ortholog); FOUND IN plasma membrane (ortholog) 18 8822136 8826046 - 116887593 MODEL JAAIVD010000013;XM_032889216 XP_032745107 mucin-21 protein-coding 625962027 LOC116904673 small nucleolar RNA SNORA70 6 22649125 22649253 + 116904673 MODEL JAAIVD010000024 pseudo 625962028 LOC116897941 olfactory receptor 183-like 4 42979779 42980714 - 22301074;30032202 116897941 MODEL JAAIVD010000003;XM_032899341 XP_032755232 protein-coding 625962032 Percc1 proline and glutamate rich with coiled coil 1 INVOLVED IN digestive tract morphogenesis (ortholog); enteroendocrine cell differentiation (ortholog); ASSOCIATED WITH Diarrhea 11 (ortholog) 9 2437090 2438154 - 116909566 MODEL JAAIVD010000002;XM_032913184 XP_032769075 protein PERCC1 protein-coding 625962036 Met MET proto-oncogene, receptor tyrosine kinase ENCODES a protein that exhibits beta-catenin binding (ortholog); hepatocyte growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN altered scatter factor/hepatocyte growth factor signaling pathway; E-cadherin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); FOUND IN basal plasma membrane (ortholog); dendrite (ortholog); excitatory synapse (ortholog) 6 121393392 121472984 - 22301074;30032202 116904060 MODEL JAAIVD010000024;XM_032906920 XP_032762811 hepatocyte growth factor receptor protein-coding 625962059 LOC116900341 probable inactive 1-aminocyclopropane-1-carboxylate synthase-like protein 2 5 68027667 68042371 - 22301074;30032202 116900341 MODEL JAAIVD010000023;XM_032902094 XP_032757985 protein-coding 625962078 Lemd1 LEM domain containing 1 10 3590855 3619909 - 116911357 MODEL JAAIVD010000005;XM_032915277 XP_032771168 LEM domain-containing protein 1 protein-coding 625962087 Pitpnm3 PITPNM family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); receptor tyrosine kinase binding (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog) 9 43368636 43456617 + 22301074;30032202 116908565 MODEL JAAIVD010000002;XM_032911768 XP_032767659 membrane-associated phosphatidylinositol transfer protein 3 protein-coding 625962111 LOC116898481 peptidyl-prolyl cis-trans isomerase A-like 4 117084065 117084508 - 116898481 MODEL JAAIVD010000003 pseudo 625962112 Kcnk10 potassium two pore domain channel subfamily K member 10 ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cellular response to arachidonate (ortholog); memory (ortholog); ASSOCIATED WITH brain ischemia (ortholog); Deafness (ortholog) 7 111599636 111730004 - 22301074;30032202 116905343 MODEL JAAIVD010000026;XM_032908241;XM_032908242;XM_032908243;XM_032908244 XP_032764132;XP_032764133;XP_032764134;XP_032764135 potassium channel subfamily K member 10 protein-coding 625962134 LOC116913000 small nucleolar RNA SNORA17 11 42599726 42599858 + 116913000 MODEL JAAIVD010000006;XR_004389561 snorna 625962137 Habp2 hyaluronan binding protein 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); response to bleomycin (ortholog); ASSOCIATED WITH Hereditary Thrombophilia (ortholog); Neoplasm Metastasis (ortholog); pulmonary fibrosis (ortholog) 2 59859355 59893395 - 22301074;30032202 116891337 MODEL JAAIVD010000001;XM_032892268;XM_032892269 XP_032748159;XP_032748160 hyaluronan-binding protein 2 protein-coding 625962159 LOC116897658 U4 spliceosomal RNA 3 1374443 1374584 - 116897658 MODEL JAAIVD010000012;XR_004387623 snrna 625962162 Spo11 SPO11 initiator of meiotic double strand breaks INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); male meiosis I (ortholog); ASSOCIATED WITH spermatogenic failure 3 (ortholog); FOUND IN chromosome, telomeric region (ortholog) 5 144995771 145009714 - 22301074;30032202 116900752 MODEL JAAIVD010000023;XM_032902458;XM_032902459;XM_032902460;XM_032902461 XP_032758349;XP_032758350;XP_032758351;XP_032758352 SPO11 initiator of meiotic double stranded breaks;meiotic recombination protein SPO11 protein-coding 625962186 Prap1 proline rich acidic protein 1 ENCODES a protein that exhibits triglyceride binding (ortholog); INVOLVED IN cellular response to X-ray (ortholog); deactivation of mitotic spindle assembly checkpoint (ortholog); DNA damage response (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) 2 61772074 61775800 - 116893865 MODEL JAAIVD010000001;XM_032895584 XP_032751475 proline-rich acidic protein 1 protein-coding 625962195 Rab1b RAB1B, member RAS oncogene family ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of endothelial intestinal barrier (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog); phagophore assembly site membrane (ortholog) 2 2544524 2552501 + 22301074 116890736 MODEL JAAIVD010000001;XM_032891192 XP_032747083 ras-related protein Rab-1B protein-coding 625962205 LOC116902707 60S ribosomal protein L32-like 6 46613573 46614092 - 22301074;30032202 116902707 MODEL JAAIVD010000024;XM_032905060 XP_032760951 protein-coding 625962210 LOC116913839 cytochrome c oxidase subunit 4 isoform 1, mitochondrial-like 12 22987872 23024628 + 116913839 MODEL JAAIVD010000007 pseudo 625962211 Spin4 spindlin family member 4 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Lui-Jee-Baron syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) X 53367397 53369654 + 22301074;30032202 116888673 MODEL JAAIVD010000014;XM_032889972 XP_032745863 spindlin-4 protein-coding 625962216 Shfl shiftless antiviral inhibitor of ribosomal frameshifting ENCODES a protein that exhibits identical protein binding (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); negative regulation of translational frameshifting (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 17136573 17142420 + 30032202 116907094 MODEL JAAIVD010000027;XM_032910061;XM_032910062 XP_032765952;XP_032765953 shiftless antiviral inhibitor of ribosomal frameshifting protein protein-coding 625962233 LOC116892776 aurora kinase B-like 2 183348288 183349431 + 116892776 MODEL JAAIVD010000001 pseudo 625962234 LOC116900170 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 5 30545016 30545314 - 116900170 MODEL JAAIVD010000023 pseudo 625962235 Gskip GSK3B interacting protein ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase A binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of protein kinase activity (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH myeloid leukemia (ortholog); myeloid neoplasm (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 123345004 123361350 + 30032202 116905439 MODEL JAAIVD010000026;XM_032908380 XP_032764271 GSK3B-interacting protein protein-coding 625962242 LOC116902880 anionic trypsin-2-like 6 99156037 99160148 + 22301074;30032202 116902880 MODEL JAAIVD010000024;XM_032905210 XP_032761101 protein-coding 625962249 LOC116907505 bleomycin hydrolase-like 8 98498619 98501501 - 116907505 MODEL JAAIVD010000027 pseudo 625962250 Zbtb2 zinc finger and BTB domain containing 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 2 199142167 199161169 - 22301074;30032202 116892890 MODEL JAAIVD010000001;XM_032894798;XM_032894799 XP_032750689;XP_032750690 zinc finger and BTB domain-containing protein 2 protein-coding 625962260 LOC116903526 60S ribosomal protein L21-like 6 57965566 57966050 - 116903526 MODEL JAAIVD010000024 pseudo 625962261 LOC116913722 granzyme C 12 68603043 68605780 + 22301074;30032202 116913722 MODEL JAAIVD010000007;XM_032918026 XP_032773917 protein-coding 625962270 Ube2d1 ubiquitin conjugating enzyme E2 D1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of TORC1 signaling (ortholog); positive regulation of protein polyubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) 18 15566115 15599129 + 30032202 116887188 MODEL JAAIVD010000013;XM_032888743 XP_032744634 ubiquitin-conjugating enzyme E2 D1 protein-coding 625962281 Rap1a RAP1A, member of RAS oncogene family ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Hyperoxaluria (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); early endosome (ortholog) 3 52327281 52403568 + 22301074;30032202 116896416 MODEL JAAIVD010000012;XM_032897559;XM_032897560 XP_032753450;XP_032753451 ras-related protein Rap-1A protein-coding 625962296 Cpn2 carboxypeptidase N subunit 2 4 15169579 15179151 - 22301074;30032202 116897848 MODEL JAAIVD010000003;XM_032899259 XP_032755150 protein-coding 625962301 Gsk3b glycogen synthase kinase 3 beta ENCODES a protein that exhibits ATP binding (ortholog); beta-catenin binding (ortholog); dynactin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); autosome genomic imprinting (ortholog); axonogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; glycogen biosynthetic pathway; Hedgehog signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute myocardial infarction (ortholog); FOUND IN axon (ortholog); beta-catenin destruction complex (ortholog); centrosome (ortholog) 4 23051613 23200719 + 22301074;30032202 116898838 MODEL JAAIVD010000003;XM_032900191;XM_032900192 XP_032756082;XP_032756083 glycogen synthase kinase-3 beta protein-coding 625962320 LOC116884036 60S ribosomal protein L29-like 14 18011002 18011505 - 116884036 MODEL JAAIVD010000009 pseudo 625962321 C4bpb complement component 4 binding protein beta INVOLVED IN negative regulation of complement activation, classical pathway (ortholog); positive regulation of protein catabolic process (ortholog); regulation of opsonization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular space (ortholog) 10 5137198 5147905 + 116911645 MODEL JAAIVD010000005;XM_032915602;XM_032915603 XP_032771493;XP_032771494 C4b-binding protein beta chain protein-coding 625962334 Usp34 ubiquitin specific peptidase 34 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); protein K48-linked deubiquitination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); chromosome 2p16.1-p15 deletion syndrome (ortholog) 11 93440490 93628778 - 22301074;30032202 116911952 MODEL JAAIVD010000006;XM_032915874 XP_032771765 ubiquitin carboxyl-terminal hydrolase 34 protein-coding 625962418 LOC116890801 aldehyde dehydrogenase family 3 member B1 2 3722176 3736686 + 22301074;30032202 116890801 MODEL JAAIVD010000001;XM_032891283 XP_032747174 protein-coding 625962432 Abhd12b abhydrolase domain containing 12B 7 83838802 83869658 + 30032202 116906119 MODEL JAAIVD010000026;XM_032909118 XP_032765009 protein ABHD12B protein-coding 625962448 Qsox1 quiescin sulfhydryl oxidase 1 ENCODES a protein that exhibits FAD binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein disulfide isomerase activity (ortholog); INVOLVED IN extracellular matrix assembly (ortholog); negative regulation of macroautophagy (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); VACTERL association (ortholog); FOUND IN extracellular exosome (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 10 35189589 35227365 - 30032202 116911178 MODEL JAAIVD010000005;XM_032915041;XM_032915042 XP_032770932;XP_032770933 sulfhydryl oxidase 1 protein-coding 625962470 Ggt5 gamma-glutamyltransferase 5 ENCODES a protein that exhibits glutathione hydrolase activity (ortholog); leukotriene-C(4) hydrolase (ortholog); peptidyltransferase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); fatty acid metabolic process (ortholog); glutathione catabolic process (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 18 11829780 11855917 - 22301074 116887076 MODEL JAAIVD010000013;XM_032888582 XP_032744473 glutathione hydrolase 5 proenzyme protein-coding 625962485 Slc39a10 solute carrier family 39 member 10 ENCODES a protein that exhibits protein tyrosine phosphatase activator activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); intracellular zinc ion homeostasis (ortholog); negative regulation of B cell apoptotic process (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 4 128112434 128160890 + 22301074;30032202 116899383 MODEL JAAIVD010000003;XM_032901101;XM_032901102 XP_032756992;XP_032756993 zinc transporter ZIP10 protein-coding 625962504 Prr30 proline rich 30 7 23122501 23124293 + 116905552 MODEL JAAIVD010000026;XM_032908583 XP_032764474 proline-rich protein 30 protein-coding 625962509 Ccdc125 coiled-coil domain containing 125 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); negative regulation of cell motility (ortholog); negative regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 3 158049955 158075054 + 30032202 116897097 MODEL JAAIVD010000012;XM_032898738;XM_032898739;XM_032898740 XP_032754629;XP_032754630;XP_032754631 coiled-coil domain-containing protein 125 protein-coding 625962531 LOC116895386 60S ribosomal protein L21-like 3 56926542 56927025 - 116895386 MODEL JAAIVD010000012 pseudo 625962532 Gk glycerol kinase ENCODES a protein that exhibits glycerol kinase activity (ortholog); histone binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); glycerol metabolic process (ortholog); glycerol-3-phosphate biosynthetic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypercholesterolemia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) X 16047342 16123579 - 22301074;30032202 116889013 MODEL JAAIVD010000014;XM_032890222 XP_032746113 protein-coding 625962557 Cd300lf CD300 molecule like family member f ENCODES a protein that exhibits ceramide binding (ortholog); identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN interleukin-13-mediated signaling pathway (ortholog); negative regulation of apoptotic cell clearance (ortholog); negative regulation of mast cell activation (ortholog) 9 68966742 68982760 + 30032202 116909547 MODEL JAAIVD010000002;XM_032913164 XP_032769055 CMRF35-like molecule 1 protein-coding 625962568 Rps6ka1 ribosomal protein S6 kinase A1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN hepatocyte proliferation (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of TOR signaling (ortholog); PARTICIPATES IN adenosine signaling pathway; fibroblast growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH alcohol-related birth defects (ortholog); fetal alcohol spectrum disorder (ortholog); Sezary's disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 1 24344718 24384104 + 22301074;30032202 116894962 MODEL JAAIVD010000025;XM_032896507;XM_032896508;XM_032896509 XP_032752398;XP_032752399;XP_032752400 ribosomal protein S6 kinase alpha-1 protein-coding 625962600 LOC116893587 retinoic acid early-inducible protein 1-beta-like 2 229472909 229484013 + 116893587 MODEL JAAIVD010000001;XM_032895285 XP_032751176 protein-coding 625962606 LOC116902257 zinc finger protein 709-like 5 142673930 142677232 + 116902257 MODEL JAAIVD010000023;XM_032904676 XP_032760567 protein-coding 625962613 Taf6 TATA-box binding protein associated factor 6 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); DNA binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Alazami-Yuan Syndrome (ortholog); Cornelia de Lange syndrome 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); MLL1 complex (ortholog); nucleoplasm (ortholog) 16 15550517 15556246 - 22301074;30032202 116885191 MODEL JAAIVD010000004;XM_032886410 XP_032742301 transcription initiation factor TFIID subunit 6 protein-coding 625962631 LOC116889910 olfactory receptor 6C3-like 1 160363271 160364209 + 22301074;30032202 116889910 MODEL JAAIVD010000025;XM_032890730 XP_032746621 protein-coding 625962634 Haus8 HAUS augmin like complex subunit 8 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 13 13726444 13740720 + 116914734 MODEL JAAIVD010000008;XM_032919170 XP_032775061 HAUS augmin-like complex subunit 8 protein-coding 625962649 Echdc2 enoyl-CoA hydratase domain containing 2 FOUND IN mitochondrion (ortholog) 1 46664930 46678444 - 30032202 116887501 MODEL JAAIVD010000025;XM_032889123;XM_032889132 XP_032745014;XP_032745023 enoyl-CoA hydratase domain-containing protein 2, mitochondrial protein-coding 625962667 Ola1 Obg like ATPase 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 50443082 50559795 - 22301074;30032202 116901515 MODEL JAAIVD010000023;XM_032903490 XP_032759381 obg-like ATPase 1 protein-coding 625962682 LOC116890472 small nucleolar RNA SNORA28 1 208139658 208139780 - 116890472 MODEL JAAIVD010000025;XR_004386661 snorna 625962685 Panx3 pannexin 3 ENCODES a protein that exhibits calcium channel activity (ortholog); gap junction hemi-channel activity (ortholog); INVOLVED IN cell-cell signaling (ortholog); osteoblast differentiation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); gap junction (ortholog); plasma membrane (ortholog) 8 33822211 33831029 - 30032202 116907518 MODEL JAAIVD010000027;XM_032910520 XP_032766411 pannexin-3 protein-coding 625962693 LOC116890152 thymosin beta-10-like 1 250968401 250968545 + 22301074;30032202 116890152 MODEL JAAIVD010000025;XM_032890886 XP_032746777 protein-coding 625962697 LOC116898317 60S ribosomal protein L31-like 4 39466964 39467278 - 22301074;30032202 116898317 MODEL JAAIVD010000003;XM_032899656 XP_032755547 protein-coding 625962700 LOC116890407 U6 spliceosomal RNA 1 170085425 170085528 + 116890407 MODEL JAAIVD010000025;XR_004386609 snrna 625962703 LOC116897494 small nucleolar RNA SNORD47 3 50204833 50204909 - 116897494 MODEL JAAIVD010000012;XR_004387515 snorna 625962706 Fgfr2 fibroblast growth factor receptor 2 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); axonogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Acneiform Eruptions (ortholog); acrocephalosyndactylia (ortholog); ankylosis (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 71804261 71905167 + 22301074;30032202;7803853 116891425 Q63710 MODEL JAAIVD010000001;XM_032892466;XM_032892467;XM_032892468;XM_032892469;XM_032892470;XM_032892471;XM_032892472;XM_032892473;XM_032892474;XM_032892475;XM_032892476;XM_032892477;XM_032892478;Z35137;Z35138;Z35139 CAA84510;CAA84511;XP_032748357;XP_032748358;XP_032748359;XP_032748360;XP_032748361;XP_032748362;XP_032748363;XP_032748364;XP_032748365;XP_032748366;XP_032748367;XP_032748368;XP_032748369 fibroblast growth factor receptor 2b, keratinocyte growth factor receptor protein-coding 625962745 Kcnc2 potassium voltage-gated channel subfamily C member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN action potential (ortholog); cellular response to ammonium ion (ortholog); cellular response to nitric oxide (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 103 (ortholog); epilepsy (ortholog); FOUND IN apical plasma membrane (ortholog); axolemma (ortholog); axon (ortholog) 1 190413118 190579293 + 1378392;22301074;30032202 116908953 MODEL JAAIVD010000025;X62839;XM_032912416;XM_032912423;XM_032912431;XM_032912439;XM_032912448 CAA44643;XP_032768307;XP_032768314;XP_032768322;XP_032768330;XP_032768339 voltage-gated potassium channel protein-coding 625962769 LOC116897709 60S ribosomal protein L17-like 4 25929228 25929698 - 116897709 MODEL JAAIVD010000003 pseudo 625962770 Hspa4l heat shock protein family A (Hsp70) member 4 like ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN protein folding (ortholog); response to unfolded protein (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 3 113038342 113091019 - 22301074;30032202 116895886 MODEL JAAIVD010000012;XM_032896978 XP_032752869 heat shock 70 kDa protein 4L protein-coding 625962794 LOC116893282 glycylpeptide N-tetradecanoyltransferase 1-like 1 65281068 65282474 - 116893282 MODEL JAAIVD010000025 pseudo 625962795 Hsf1 heat shock transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to angiotensin (ortholog); cellular response to cadmium ion (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 248809178 248834596 + 22301074 116913153 MODEL JAAIVD010000025;XM_032917365;XM_032917368;XM_032917372;XM_032917376;XM_032917379 XP_032773256;XP_032773259;XP_032773263;XP_032773267;XP_032773270 heat shock factor protein 1 protein-coding 625962820 Muc15 mucin 15, cell surface associated 5 89000196 89006217 + 116901735 MODEL JAAIVD010000023;XM_032903872 XP_032759763 mucin-15 protein-coding 625962827 LOC116912141 uncharacterized LOC116912141 1 238226121 238229624 + 116912141 MODEL JAAIVD010000025;XR_004389426 ncrna 625962832 LOC116892639 N-lysine methyltransferase KMT5A-like 2 176380898 176381998 + 22301074 116892639 MODEL JAAIVD010000001;XM_032894459 XP_032750350 protein-coding 625962837 Isca1 iron-sulfur cluster assembly 1 PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH multiple mitochondrial dysfunctions syndrome (ortholog); multiple mitochondrial dysfunctions syndrome 5 (ortholog); FOUND IN mitochondrial [4Fe-4S] assembly complex (ortholog); mitochondrion (ortholog) 14 78360631 78373651 + 22301074;30032202 116883814 MODEL JAAIVD010000009;XM_032885064 XP_032740955 iron-sulfur cluster assembly 1 homolog, mitochondrial protein-coding 625962845 Cnn2 calponin 2 INVOLVED IN cellular response to mechanical stimulus (ortholog); establishment of localization in cell (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH Pulmonary Atresia (ortholog); renal cell carcinoma (ortholog); FOUND IN stress fiber (ortholog) 1 154881318 154888143 - 22301074 116905465 MODEL JAAIVD010000025;XM_032908433 XP_032764324 calponin-2 protein-coding 625962856 LOC116887814 protein phosphatase 1A-like X 30778482 30802854 - 116887814 MODEL JAAIVD010000014 pseudo 625962857 Tor1aip2 torsin 1A interacting protein 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); positive regulation of ATP-dependent activity (ortholog); protein localization to nuclear envelope (ortholog); FOUND IN endoplasmic reticulum (ortholog) 10 35461819 35474007 + 116911691 MODEL JAAIVD010000005;XM_032915648;XM_032915649 XP_032771539;XP_032771540 torsin-1A-interacting protein 2 protein-coding 625962867 LOC116906933 olfactory receptor 150-like 8 82622653 82623588 + 22301074;30032202 116906933 MODEL JAAIVD010000027;XM_032909858 XP_032765749 protein-coding 625962870 LOC116890518 small nucleolar RNA SNORA17 1 108019385 108019516 - 116890518 MODEL JAAIVD010000025;XR_004386700 snorna 625962873 Mre11 MRE11 double strand break repair nuclease ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered p53 signaling pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); Ataxia Telangiectasia Like Disorder (ortholog); FOUND IN BRCA1-C complex (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) 8 10581117 10627710 + 22301074;30032202 116906631 MODEL JAAIVD010000027;XM_032909389;XM_032909390;XM_032909391 XP_032765280;XP_032765281;XP_032765282 MRE11 homolog, double strand break repair nuclease;double-strand break repair protein MRE11 protein-coding 625962903 LOC116891411 F-box/WD repeat-containing protein 11-like 2 70791938 70793618 + 116891411 MODEL JAAIVD010000001 pseudo 625962904 LOC116887451 uncharacterized LOC116887451 18 8461885 8462560 - 116887451 MODEL JAAIVD010000013;XR_004386218 ncrna 625962908 LOC116890535 small nucleolar RNA SNORA17 1 150167787 150167917 + 116890535 MODEL JAAIVD010000025;XR_004386716 snorna 625962911 Dbi diazepam binding inhibitor, acyl-CoA binding protein ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); fatty-acyl-CoA binding (ortholog); identical protein binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient (ortholog); conditioned place preference (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN contractile muscle fiber (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 10 12688608 12697086 - 22301074;30032202 116911228 MODEL JAAIVD010000005;XM_032915129 XP_032771020 acyl-CoA-binding protein protein-coding 625962919 Srd5a3 steroid 5 alpha-reductase 3 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); polyprenal reductase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); obsolete dolichol biosynthetic process (ortholog); obsolete dolichol metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cone dystrophy (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 32887195 32900856 + 30032202 116912603 MODEL JAAIVD010000006;XM_032916726;XM_032916727 XP_032772617;XP_032772618 polyprenol reductase protein-coding 625962933 LOC116907012 olfactory receptor 150-like 8 82718246 82719181 + 22301074;30032202 116907012 MODEL JAAIVD010000027;XM_032909948 XP_032765839 protein-coding 625962936 LOC116898388 c-Myc-binding protein-like 4 73846800 73847127 + 116898388 MODEL JAAIVD010000003 pseudo 625962937 LOC116890478 small nucleolar RNA SNORA61 1 25939213 25939342 - 116890478 MODEL JAAIVD010000025;XR_004386667 snorna 625962940 LOC116900267 olfactory receptor 1030 5 63276891 63277847 + 22301074;30032202 116900267 MODEL JAAIVD010000023;XM_032902019 XP_032757910 protein-coding 625962943 LOC116903780 taste receptor type 2 member 124-like 6 16526519 16541287 + 116903780 MODEL JAAIVD010000024 pseudo 625962944 LOC116913179 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 12 58476727 58481677 + 116913179 MODEL JAAIVD010000007 pseudo 625962945 LOC116899795 U7 small nuclear RNA 4 78459068 78459130 + 116899795 MODEL JAAIVD010000003;XR_004387800 snrna 625962948 Ddx25 DEAD-box helicase 25 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); regulation of translation (ortholog); spermatid development (ortholog); ASSOCIATED WITH azoospermia (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleus (ortholog) 8 31080742 31097315 - 22301074;30032202 116907430 MODEL JAAIVD010000027;XM_032910398 XP_032766289 ATP-dependent RNA helicase DDX25 protein-coding 625962964 Znf7 zinc finger protein 7 1 249214620 249221019 + 30032202 116913427 MODEL JAAIVD010000025;XM_032917617;XM_032917626;XM_032917635 XP_032773508;XP_032773517;XP_032773526 protein-coding 625962978 Ucp2 uncoupling protein 2 ENCODES a protein that exhibits antiporter activity (ortholog); chloride transmembrane transporter activity (ortholog); GDP binding (ortholog); INVOLVED IN C4-dicarboxylate transport (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 98793685 98799910 + 22301074;30032202 116891740 MODEL JAAIVD010000001;XM_032893046 XP_032748937 mitochondrial uncoupling protein 2 protein-coding 625962990 LOC116914178 U6 spliceosomal RNA 12 17954259 17954362 - 116914178 MODEL JAAIVD010000007;XR_004389721 snrna 625962993 Tmem235 transmembrane protein 235 FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog) 9 66195051 66199936 - 30032202 116909439 MODEL JAAIVD010000002;XM_032913014 XP_032768905 protein-coding 625963001 Bloc1s1 biogenesis of lysosomal organelles complex 1 subunit 1 ENCODES a protein that exhibits protein-lysine-acetyltransferase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); cytosol (ortholog) 1 156396667 156400283 - 30032202 116906617 MODEL JAAIVD010000025;XM_032909378 XP_032765269 biogenesis of lysosome-related organelles complex 1 subunit 1 protein-coding 625963009 LOC116890588 small nucleolar RNA SNORA17 1 212140525 212140720 - 116890588 MODEL JAAIVD010000025 pseudo 625963010 LOC116895571 uncharacterized LOC116895571 3 134420529 134424521 + 116895571 MODEL JAAIVD010000012;XR_004387290 ncrna 625963014 Serpinc1 serpin family C member 1 ENCODES a protein that exhibits heparin binding (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); lactation (ortholog); response to nutrient (ortholog); PARTICIPATES IN coagulation cascade pathway; enoxaparin pharmacodynamics pathway; fondaparinux pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog) 10 40270506 40285507 + 22301074;30032202 116911141 MODEL JAAIVD010000005;XM_032914993 XP_032770884 antithrombin-III protein-coding 625963024 LOC116889287 low molecular weight phosphotyrosine protein phosphatase-like X 7793950 7794589 - 116889287 MODEL JAAIVD010000014 pseudo 625963025 LOC116888030 developmental pluripotency-associated protein 5A-like X 83295792 83296152 - 116888030 MODEL JAAIVD010000014 pseudo 625963026 Rer1 retention in endoplasmic reticulum sorting receptor 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); positive regulation of protein localization to plasma membrane (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 1 5634702 5647146 + 30032202 116892036 MODEL JAAIVD010000025;XM_032893501 XP_032749392 protein RER1 protein-coding 625963037 LOC116886849 5'-nucleotidase domain-containing protein 1 18 36087467 36109319 + 30032202 116886849 MODEL JAAIVD010000013;XM_032888301 XP_032744192 protein-coding 625963047 LOC116905885 40S ribosomal protein S21-like 7 29142237 29142456 + 116905885 MODEL JAAIVD010000026 pseudo 625963048 Ankrd49 ankyrin repeat domain 49 INVOLVED IN positive regulation of DNA-templated transcription (ortholog) 8 10576317 10581114 - 22301074 116906632 MODEL JAAIVD010000027;XM_032909392 XP_032765283 ankyrin repeat domain-containing protein 49 protein-coding 625963055 LOC116887057 sodium/glucose cotransporter 1-like 18 11440879 11496011 - 22301074;30032202 116887057 MODEL JAAIVD010000013;XM_032888546;XM_032888548 XP_032744437;XP_032744439 protein-coding 625963076 LOC116909215 angiogenic factor with G patch and FHA domains 1-like 9 7730686 7748998 - 116909215 MODEL JAAIVD010000002 pseudo 625963077 LOC116904309 proteasome subunit alpha type-3-like 6 52471033 52471553 + 116904309 MODEL JAAIVD010000024 pseudo 625963078 LOC116893000 GTP-binding protein SAR1a 2 221906923 221907613 + 22301074;30032202 116893000 MODEL JAAIVD010000001;XM_032894962 XP_032750853 protein-coding 625963083 Itm2a integral membrane protein 2A INVOLVED IN plasma cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog) X 64301715 64307691 + 30032202 116888983 MODEL JAAIVD010000014;XM_032890203 XP_032746094 protein-coding 625963093 Chchd2 coiled-coil-helix-coiled-coil-helix domain containing 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); positive regulation of mitochondrial ATP synthesis coupled electron transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); Parkinson's disease 22 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleus (ortholog) 16 24130126 24136056 + 30032202 116885675 MODEL JAAIVD010000004;XM_032886982 XP_032742873 coiled-coil-helix-coiled-coil-helix domain-containing protein 2 protein-coding 625963101 LOC116894884 U6 spliceosomal RNA 2 34213141 34213247 - 116894884 MODEL JAAIVD010000001;XR_004387093 snrna 625963104 Fzr1 fizzy and cell division cycle 20 related 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); DNA synthesis involved in mitotic DNA replication (ortholog); lens fiber cell differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); developmental and epileptic encephalopathy 109 (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 153513081 153525664 + 22301074;30032202 116904303 MODEL JAAIVD010000025;XM_032907223 XP_032763114 fizzy-related protein homolog protein-coding 625963122 LOC116889793 40S ribosomal protein S12-like 22301074;30032202 116889793 MODEL JAAIVD010000388;XM_032890643 XP_032746534 protein-coding 625963123 LOC116907757 mortality factor 4-like protein 1 8 12633133 12634926 + 116907757 MODEL JAAIVD010000027 pseudo 625963124 Mplkip M-phase specific PLK1 interacting protein ASSOCIATED WITH genetic disease (ortholog); nonphotosensitive trichothiodystrophy 4 (ortholog); photosensitive trichothiodystrophy 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 14 36696636 36699027 - 30032202 116883629 MODEL JAAIVD010000009;XM_032884819 XP_032740710 M-phase-specific PLK1-interacting protein protein-coding 625963131 LOC116904262 peptidyl-prolyl cis-trans isomerase A-like 6 37644281 37644769 - 116904262 MODEL JAAIVD010000024 pseudo 625963132 Prrc2a proline rich coiled-coil 2A ASSOCIATED WITH Transplant Rejection (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 18 7747464 7762736 - 30032202 116886917 MODEL JAAIVD010000013;XM_032888396 XP_032744287 protein PRRC2A protein-coding 625963166 LOC116894044 olfactory receptor 52K1-like 2 102546402 102547355 + 22301074 116894044 MODEL JAAIVD010000001;XM_032895764 XP_032751655 protein-coding 625963169 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50241475 50241546 - 116911919 MODEL JAAIVD010000005 trna 625963170 Fbxo38 F-box protein 38 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of T cell activation (ortholog); negative regulation of T cell mediated immune response to tumor cell (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); autosomal dominant distal hereditary motor neuronopathy 6 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 6624264 6671057 + 22301074;30032202 116888237 MODEL JAAIVD010000014;XM_032889528 XP_032745419 F-box only protein 38 protein-coding 625963196 LOC116896107 choline-phosphate cytidylyltransferase A-like 3 536693 537779 + 116896107 MODEL JAAIVD010000012 pseudo 625963197 Trnap-cgg transfer RNA proline (anticodon CGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48632464 48632535 + 116910799 MODEL JAAIVD010000002 trna 625963198 Adck2 aarF domain containing kinase 2 INVOLVED IN regulation of ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH mitochondrial myopathy (ortholog); FOUND IN mitochondrion (ortholog) 6 100211053 100224103 - 30032202 116903928 MODEL JAAIVD010000024;XM_032906698;XM_032906699 XP_032762589;XP_032762590 uncharacterized aarF domain-containing protein kinase 2 protein-coding 625963213 Rab3b RAB3B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); positive regulation of dopamine uptake involved in synaptic transmission (ortholog); regulation of exocytosis (ortholog); FOUND IN cytoplasm (ortholog); dopaminergic synapse (ortholog); perinuclear region of cytoplasm (ortholog) 1 45908429 45976456 - 22301074;30032202 116899042 MODEL JAAIVD010000025;XM_032900510 XP_032756401 ras-related protein Rab-3B protein-coding 625963222 LOC116913536 uncharacterized LOC116913536 12 19543709 19544334 - 116913536 MODEL JAAIVD010000007;XR_004389628 ncrna 625963226 Vldlr very low density lipoprotein receptor ENCODES a protein that exhibits apolipoprotein binding (ortholog); calcium-dependent protein binding (ortholog); cargo receptor activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH age related macular degeneration 1 (ortholog); Alzheimer's disease (ortholog); amenorrhea (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); extracellular space (ortholog) 2 27230627 27262383 + 22301074 116891060 MODEL JAAIVD010000001;XM_032891755;XM_032891756;XM_032891757 XP_032747646;XP_032747647;XP_032747648 very low-density lipoprotein receptor protein-coding 625963253 LOC116896029 chondroitin sulfate proteoglycan 4-like 3 183414224 183466274 - 116896029 MODEL JAAIVD010000012;XM_032897035 XP_032752926 protein-coding 625963266 Fxyd3 FXYD domain containing ion transport regulator 3 ENCODES a protein that exhibits ATPase binding (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); pancreatic cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 164953524 164960991 + 22301074;30032202 116892289 MODEL JAAIVD010000001;XM_032893889;XM_032893890 XP_032749780;XP_032749781 FXYD domain-containing ion transport regulator 3 protein-coding 625963283 Sec24a SEC24 homolog A, COPII component ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH progressive muscular atrophy (ortholog); FOUND IN COPII vesicle coat (ortholog) 9 34274642 34345680 - 22301074;30032202 116910249 MODEL JAAIVD010000002;XM_032914140 XP_032770031 SEC24 homolog A, COPII coat complex component;protein transport protein Sec24A protein-coding 625963310 LOC116910956 voltage-dependent anion-selective channel protein 1-like 10 83565545 83566410 - 116910956 MODEL JAAIVD010000005 pseudo 625963311 Gdpd3 glycerophosphodiester phosphodiesterase domain containing 3 ENCODES a protein that exhibits phosphatidylcholine lysophospholipase activity (ortholog); phosphoric diester hydrolase activity (ortholog); INVOLVED IN N-acylethanolamine metabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear region of cytoplasm (ortholog) 2 75121375 75131347 - 22301074;30032202 116893903 MODEL JAAIVD010000001;XM_032895627 XP_032751518 lysophospholipase D GDPD3 protein-coding 625963325 LOC116906358 small nucleolar RNA SNORD113/SNORD114 family 7 127246082 127246156 + 116906358 MODEL JAAIVD010000026;XR_004388629 snorna 625963328 Fign fidgetin, microtubule severing factor ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN nuclear matrix (ortholog) 5 41517899 41639322 - 22301074;30032202 116901457 MODEL JAAIVD010000023;XM_032903398;XM_032903399;XM_032903400 XP_032759289;XP_032759290;XP_032759291 fidgetin protein-coding 625963339 LOC116906973 replication factor C subunit 4-like 8 19111767 19112868 + 22301074;30032202 116906973 MODEL JAAIVD010000027;XM_032909893 XP_032765784 protein-coding 625963343 KEG97_t15 tRNA-Gly MT 9376 9442 + 64988253 trna 625963344 LOC116896025 nucleolar protein 16-like 3 182939720 182940354 + 116896025 MODEL JAAIVD010000012 pseudo 625963345 LOC116895185 peptidyl-prolyl cis-trans isomerase FKBP3-like 3 173143707 173144319 - 116895185 MODEL JAAIVD010000012 pseudo 625963346 LOC116893567 igE-binding protein-like 2 218083215 218087680 - 22301074 116893567 MODEL JAAIVD010000001;XM_032895273 XP_032751164 protein-coding 625963352 LOC116902913 small nuclear ribonucleoprotein G-like 6 109864954 109865195 + 116902913 MODEL JAAIVD010000024 pseudo 625963353 LOC116894707 dynactin subunit 3-like 2 226062320 226063126 + 22301074;30032202 116894707 MODEL JAAIVD010000001;XM_032896402 XP_032752293 protein-coding 625963358 Dusp4 dual specificity phosphatase 4 ENCODES a protein that exhibits MAP kinase serine/threonine phosphatase activity (ortholog); MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 52212878 52224760 - 22301074;30032202 116914661 MODEL JAAIVD010000008;XM_032919063 XP_032774954 dual specificity protein phosphatase 4 protein-coding 625963366 LOC116890338 U6 spliceosomal RNA 1 269511395 269511502 + 116890338 MODEL JAAIVD010000025;XR_004386560 snrna 625963369 Mmrn2 multimerin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell migration involved in sprouting angiogenesis (ortholog); negative regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); FOUND IN basement membrane (ortholog); extracellular space (ortholog) 13 10147626 10169968 + 22301074;30032202 116914819 MODEL JAAIVD010000008;XM_032919276 XP_032775167 multimerin-2 protein-coding 625963380 LOC116910323 alpha-enolase-like 9 54740334 54741757 - 116910323 MODEL JAAIVD010000002 pseudo 625963381 Map3k11 mitogen-activated protein kinase kinase kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); JUN kinase kinase kinase activity (ortholog); INVOLVED IN cell cycle G1/S phase transition (ortholog); JNK cascade (ortholog); MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; Reelin signaling pathway; FOUND IN centrosome (ortholog); microtubule (ortholog) 2 1992919 2006335 - 22301074;30032202 116890703 MODEL JAAIVD010000001;XM_032891133 XP_032747024 protein-coding 625963395 LOC116886232 acylcarnitine hydrolase-like 17 24823440 24837654 + 30032202 116886232 MODEL JAAIVD010000011;XM_032887638;XM_032887639 XP_032743529;XP_032743530 cocaine esterase-like protein-coding 625963414 Slc7a3 solute carrier family 7 member 3 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-lysine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine import across plasma membrane (ortholog); L-arginine transmembrane transport (ortholog); L-lysine import across plasma membrane (ortholog); FOUND IN plasma membrane (ortholog) X 59442239 59448314 + 22301074;30032202 116889135 MODEL JAAIVD010000014;XM_032890308 XP_032746199 cationic amino acid transporter 3 protein-coding 625963430 LOC116912353 vesicle-associated membrane protein 712-like 11 10167714 10204908 + 22301074;30032202 116912353 MODEL JAAIVD010000006;XM_032916407 XP_032772298 protein-coding 625963440 LOC116910640 U6 spliceosomal RNA 9 48865970 48866074 + 116910640 MODEL JAAIVD010000002;XR_004389178 snrna 625963443 LOC116885105 small nucleolar RNA SNORA72 15 7604852 7604983 + 116885105 MODEL JAAIVD010000010;XR_004385970 snorna 625963446 LOC116888097 prohibitin-like X 97811653 97812642 + 116888097 MODEL JAAIVD010000014 pseudo 625963447 Lipe lipase E, hormone sensitive type ENCODES a protein that exhibits diacylglycerol lipase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); monoacylglycerol lipase activity (ortholog); INVOLVED IN cellular response to cold (ortholog); diacylglycerol catabolic process (ortholog); ether lipid metabolic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 6 (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); lipid droplet (ortholog) 2 169321701 169337729 + 22301074;30032202 116892458 MODEL JAAIVD010000001;XM_032894174 XP_032750065 hormone-sensitive lipase protein-coding 625963461 LOC116893422 vomeronasal type-1 receptor 1-like 2 174744833 174745786 - 22301074;30032202 116893422 MODEL JAAIVD010000001;XM_032895199 XP_032751090 protein-coding 625963464 LOC116900562 olfactory receptor 4F6-like 5 90133197 90134135 + 22301074 116900562 MODEL JAAIVD010000023;XM_032902287 XP_032758178 protein-coding 625963467 LOC116893316 60S ribosomal protein L7a-like 2 152331293 152350981 - 116893316 MODEL JAAIVD010000001 pseudo 625963468 LOC116889127 sequestosome-1-like X 78558600 78559845 + 116889127 MODEL JAAIVD010000014 pseudo 625963469 LOC116895370 60S ribosomal protein L31-like 3 51309833 51310267 - 22301074;30032202 116895370 MODEL JAAIVD010000012;XM_032896667 XP_032752558 protein-coding 625963474 Rps27 ribosomal protein S27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); translation at postsynapse (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 17 (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); GABA-ergic synapse (ortholog) 3 63429695 63430998 + 22301074;30032202 116896621 MODEL JAAIVD010000012;XM_032897884 XP_032753775 40S ribosomal protein S27 protein-coding 625963482 LOC116909441 heat shock cognate 71 kDa protein-like 9 85418732 85420623 + 22301074;30032202 116909441 MODEL JAAIVD010000002;XM_032913020 XP_032768911 protein-coding 625963487 B3gnt2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to leukemia inhibitory factor (ortholog); poly-N-acetyllactosamine biosynthetic process (ortholog); ASSOCIATED WITH Graves' disease (ortholog); rheumatoid arthritis (ortholog) 11 94050354 94074639 + 22301074;30032202 116912413 MODEL JAAIVD010000006;XM_032916476;XM_032916477 XP_032772367;XP_032772368 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 protein-coding 625963496 Foxf2 forkhead box F2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN embryonic camera-type eye morphogenesis (ortholog); embryonic digestive tract development (ortholog); establishment of planar polarity of embryonic epithelium (ortholog); ASSOCIATED WITH Stroke (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 50646220 50651589 + 30032202 116883458 MODEL JAAIVD010000009;XM_032884605 XP_032740496 forkhead box protein F2 protein-coding 625963501 LOC116897589 small nucleolar RNA SNORA17 3 142834811 142834941 - 116897589 MODEL JAAIVD010000012;XR_004387592 snorna 625963504 Atpaf2 ATP synthase mitochondrial F1 complex assembly factor 2 INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH microcephaly (ortholog); mitochondrial complex V (ATP synthase) deficiency nuclear type 1 (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 68363520 68371714 + 30032202 116909353 MODEL JAAIVD010000002;XM_032912900;XM_032912901 XP_032768791;XP_032768792 protein-coding 625963518 Itga11 integrin subunit alpha 11 ENCODES a protein that exhibits collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); collagen receptor activity (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); collagen-activated signaling pathway (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH genetic disease (ortholog); pancreatic cancer (ortholog); FOUND IN focal adhesion (ortholog); integrin alpha11-beta1 complex (ortholog) 8 56899486 57006415 - 22301074;30032202 116907718 MODEL JAAIVD010000027;XM_032910844 XP_032766735 integrin alpha-11 protein-coding 625963552 Sult4a1 sulfotransferase family 4A member 1 ENCODES a protein that exhibits identical protein binding (ortholog); sulfotransferase activity (ortholog); INVOLVED IN dendrite arborization (ortholog); sulfur compound metabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 1 253476877 253501482 - 22301074;30032202 116914495 MODEL JAAIVD010000025;XM_032918812;XM_032918820 XP_032774703;XP_032774711 sulfotransferase 4A1 protein-coding 625963568 LOC116900242 olfactory receptor 998-like 5 62942117 62943061 + 22301074;30032202 116900242 MODEL JAAIVD010000023;XM_032901993 XP_032757884 protein-coding 625963571 Nrxn1 neurexin 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to calcium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); CHROMOSOME 2p16.3 DELETION SYNDROME (ortholog); FOUND IN cell surface (ortholog); endocytic vesicle (ortholog); endoplasmic reticulum (ortholog) 7 1683267 2787164 + 116905096 MODEL JAAIVD010000026;XM_032907818;XM_032907819;XM_032907820;XM_032907821;XM_032907823;XM_032907824;XM_032907825;XM_032907826 XP_032763709;XP_032763710;XP_032763711;XP_032763712;XP_032763714;XP_032763715;XP_032763716;XP_032763717 neurexin-1 protein-coding 625963617 LOC116914013 uncharacterized LOC116914013 12 70038282 70039667 - 116914013 MODEL JAAIVD010000007;XR_004389651 ncrna 625963622 LOC116903550 uncharacterized LOC116903550 6 59758813 59780080 - 116903550 MODEL JAAIVD010000024;XR_004388284;XR_004388285 ncrna 625963630 Casp6 caspase 6 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); acute inflammatory response to non-antigenic stimulus (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 29390643 29399252 - 22301074;30032202 116896261 MODEL JAAIVD010000012;XM_032897336;XM_032897337 XP_032753227;XP_032753228 caspase-6 protein-coding 625963644 Fbxo7 F-box protein 7 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein kinase binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of lymphocyte differentiation (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH genetic disease (ortholog); Parkinson's disease (ortholog); Parkinson's disease 15 (ortholog); FOUND IN classical Lewy body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 162550608 162578941 - 30032202 116907294 MODEL JAAIVD010000025;XM_032910246 XP_032766137 F-box only protein 7 protein-coding 625963657 Abcg4 ATP binding cassette subfamily G member 4 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to high density lipoprotein particle stimulus (ortholog); cellular response to leukemia inhibitory factor (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endosome (ortholog); endosome membrane (ortholog) 8 38830626 38846090 - 22301074;30032202 116907059 MODEL JAAIVD010000027;XM_032910014;XM_032910015;XM_032910016 XP_032765905;XP_032765906;XP_032765907 ATP-binding cassette sub-family G member 4 protein-coding 625963682 LOC116900433 leukocyte elastase inhibitor A-like 5 70672357 70673029 - 116900433 MODEL JAAIVD010000023 pseudo 625963683 Ubp1 upstream binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); negative regulation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 104796419 104841578 + 22301074;30032202 116907807 MODEL JAAIVD010000027;XM_032910978;XM_032910979;XM_032910980;XM_032910981;XM_032910983;XM_032910984;XM_032910985;XM_032910986 XP_032766869;XP_032766870;XP_032766871;XP_032766872;XP_032766874;XP_032766875;XP_032766876;XP_032766877 upstream-binding protein 1 protein-coding 625963724 Hoxb1 homeobox B1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog) 9 58016958 58018343 - 22301074;30032202 116910070 MODEL JAAIVD010000002;XM_032913885 XP_032769776 homeobox protein Hox-B1 protein-coding 625963729 LOC116898523 small integral membrane protein 7-like 4 138339414 138350706 - 116898523 MODEL JAAIVD010000003;XM_032899747 XP_032755638 protein-coding 625963733 Adamts16 ADAM metallopeptidase with thrombospondin type 1 motif 16 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); male gamete generation (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); cryptorchidism (ortholog); hypertension (ortholog) 2 202098035 202222544 - 22301074;30032202 116892911 MODEL JAAIVD010000001;XM_032894833 XP_032750724 A disintegrin and metalloproteinase with thrombospondin motifs 16 protein-coding 625963760 LOC116893387 carcinoembryonic antigen-related cell adhesion molecule 6-like 2 169866347 169884071 - 30032202 116893387 MODEL JAAIVD010000001;XM_032895182 XP_032751073 protein-coding 625963769 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48718988 48719058 - 116910838 MODEL JAAIVD010000002 trna 625963770 LOC116892087 zinc finger protein 431-like 2 151798546 151800786 + 116892087 MODEL JAAIVD010000001;XM_032893562 XP_032749453 protein-coding 625963777 Notch2 notch receptor 2 ENCODES a protein that exhibits enzyme binding (ortholog); NF-kappaB binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); atrial septum morphogenesis (ortholog); bone remodeling (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Acroosteolysis Dominant Type (ortholog); Alagille syndrome (ortholog); ALAGILLE SYNDROME 2 (ortholog); FOUND IN cell surface (ortholog); cilium (ortholog); glutamatergic synapse (ortholog) 3 59166637 59301042 - 22301074;30032202 116896483 MODEL JAAIVD010000012;XM_032897648 XP_032753539 neurogenic locus notch homolog protein 2 protein-coding 625963815 Gatd1 glutamine amidotransferase class 1 domain containing 1 2 8072009 8077188 + 116890872 MODEL JAAIVD010000001;XM_032891453 XP_032747344 glutamine amidotransferase like class 1 domain containing 1;glutamine amidotransferase-like class 1 domain-containing protein 1 protein-coding 625963827 Slc48a1 solute carrier family 48 member 1 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme export (ortholog); heme export from vacuole to cytoplasm (ortholog); FOUND IN cytoplasm (ortholog); endolysosome (ortholog); endosome membrane (ortholog) 1 270599223 270607269 + 22301074;30032202 116884582 MODEL JAAIVD010000025;XM_032885727 XP_032741618 heme transporter HRG1 protein-coding 625963834 Sparcl1 SPARC like 1 INVOLVED IN regulation of synapse organization (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); endometriosis (ortholog); epilepsy (ortholog); FOUND IN extracellular matrix of synaptic cleft (ortholog); glutamatergic synapse (ortholog) 11 14142463 14174036 - 22301074;30032202 116912207 MODEL JAAIVD010000006;XM_032916154 XP_032772045 SPARC-like protein 1 protein-coding 625963849 Mpzl2 myelin protein zero like 2 INVOLVED IN cell-cell adhesion (ortholog); T cell differentiation in thymus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 111 (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 8 39574247 39585157 + 22301074;30032202 116906900 MODEL JAAIVD010000027;XM_032909811 XP_032765702 myelin protein zero-like protein 2 protein-coding 625963859 Spop speckle type BTB/POZ protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); Ductal Carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 9 58892793 58973074 - 30032202 116910597 MODEL JAAIVD010000002;XM_032914521;XM_032914522;XM_032914524;XM_032914525;XM_032914526 XP_032770412;XP_032770413;XP_032770415;XP_032770416;XP_032770417 speckle-type POZ protein protein-coding 625963882 LOC116895054 small nucleolar RNA SNORA17 2 163462725 163462839 - 116895054 MODEL JAAIVD010000001 pseudo 625963883 C18H6orf47 chromosome 18 C6orf47 homolog 18 7725412 7727774 + 116887248 MODEL JAAIVD010000013;XM_032888815 XP_032744706 uncharacterized protein C6orf47 homolog protein-coding 625963890 LOC116893713 aflatoxin B1 aldehyde reductase member 2 1 18880711 18889336 - 116893713 MODEL JAAIVD010000025;XM_032895431 XP_032751322 protein-coding 625963901 Mrpl52 mitochondrial ribosomal protein L52 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 12 70570224 70572848 - 22301074;30032202 116913702 MODEL JAAIVD010000007;XM_032917998 XP_032773889 39S ribosomal protein L52, mitochondrial protein-coding 625963909 LOC116892785 zinc finger protein 420-like 2 185635265 185658099 - 30032202 116892785 MODEL JAAIVD010000001;XM_032894658 XP_032750549 protein-coding 625963918 Slc35e3 solute carrier family 35 member E3 1 195840597 195852419 - 30032202 116909315 MODEL JAAIVD010000025;XM_032912854;XR_004389066 XP_032768745 protein-coding 625963930 Ttc14 tetratricopeptide repeat domain 14 3 120010277 120023645 - 22301074 116896950 MODEL JAAIVD010000012;XM_032898518;XM_032898519;XM_032898520 XP_032754409;XP_032754410;XP_032754411 tetratricopeptide repeat protein 14 protein-coding 625963948 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92632289 92632360 + 116904860 MODEL JAAIVD010000024 trna 625963949 Znf385b zinc finger protein 385B ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); FOUND IN nucleus (ortholog) 5 54749623 55050958 - 22301074;30032202 116901554 MODEL JAAIVD010000023;XM_032903544;XM_032903545;XM_032903546;XM_032903547;XM_032903549;XM_032903550 XP_032759435;XP_032759436;XP_032759437;XP_032759438;XP_032759440;XP_032759441 protein-coding 625963976 Adipor1 adiponectin receptor 1 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); fatty acid oxidation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Diabetic Cardiomyopathies (ortholog); end stage renal disease (ortholog); FOUND IN plasma membrane (ortholog) 10 1270888 1289697 - 30032202 116911127 MODEL JAAIVD010000005;XM_032914974;XM_032914975 XP_032770865;XP_032770866 adiponectin receptor protein 1 protein-coding 625963993 Ccnf cyclin F ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); INVOLVED IN negative regulation of centrosome duplication (ortholog); placenta development (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-5 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); nucleoplasm (ortholog) 9 1518089 1544406 - 22301074;30032202 116909745 MODEL JAAIVD010000002;XM_032913424 XP_032769315 cyclin-F protein-coding 625964014 LOC116885805 hepatic lectin-like 16 2155815 2158545 - 116885805 MODEL JAAIVD010000004;XM_032887138 XP_032743029 protein-coding 625964025 LOC116902767 40S ribosomal protein S2 1 118936617 118937576 + 22301074;30032202 116902767 MODEL JAAIVD010000025;XM_032905113;XM_032905118 XP_032761004;XP_032761009 protein-coding 625964035 LOC116894705 60S ribosomal protein L17-like 2 225010922 225011392 - 116894705 MODEL JAAIVD010000001 pseudo 625964036 LOC116895544 sentrin-specific protease 2-like 3 121171523 121173266 + 30032202 116895544 MODEL JAAIVD010000012;XM_032896787 XP_032752678 protein-coding 625964039 Krt13 keratin 13 INVOLVED IN cellular response to retinoic acid (ortholog); cytoskeleton organization (ortholog); regulation of translation in response to stress (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); genetic disease (ortholog); Genetic Skin Diseases (ortholog); FOUND IN extracellular exosome (ortholog); intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 9 54865604 54869778 - 22301074;30032202 116908854 MODEL JAAIVD010000002;XM_032912293 XP_032768184 keratin, type I cytoskeletal 13 protein-coding 625964050 Adam9 ADAM metallopeptidase domain 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding (ortholog); laminin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); cervix uteri carcinoma in situ (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 13 61442803 61525097 + 22301074;30032202 116914298 MODEL JAAIVD010000008;XM_032918540 XP_032774431 disintegrin and metalloproteinase domain-containing protein 9 protein-coding 625964077 Amot angiomotin ENCODES a protein that exhibits angiostatin binding (ortholog); identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel endothelial cell migration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN actin filament (ortholog); bicellular tight junction (ortholog); cell surface (ortholog) 1 99030708 99080644 - 30032202 116901855 MODEL JAAIVD010000025;XM_032904053 XP_032759944 protein-coding 625964094 LOC116908160 Down syndrome cell adhesion molecule-like protein 1 homolog 8 39964853 39985166 + 116908160 MODEL JAAIVD010000027;XM_032911460 XP_032767351 protein-coding 625964100 Swap70 switching B cell complex subunit SWAP70 ENCODES a protein that exhibits ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); isotype switching (ortholog); negative regulation of actin filament depolymerization (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) 2 91170145 91230853 - 30032202 116891663 MODEL JAAIVD010000001;XM_032892913 XP_032748804 switch-associated protein 70 protein-coding 625964116 LOC116894558 T-cell-interacting, activating receptor on myeloid cells protein 1-like 2 178128707 178140523 - 30032202 116894558 MODEL JAAIVD010000001;XM_032896269 XP_032752160 protein-coding 625964124 Cnot4 CCR4-NOT transcription complex subunit 4 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of megakaryocyte differentiation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN CCR4-NOT complex (ortholog) 6 104524035 104625924 + 22301074;30032202 116903967 MODEL JAAIVD010000024;XM_032906763;XM_032906764;XM_032906765;XM_032906766;XM_032906767;XM_032906768 XP_032762654;XP_032762655;XP_032762656;XP_032762657;XP_032762658;XP_032762659 protein-coding 625964148 LOC116897373 5S ribosomal RNA 3 52308584 52308702 + 116897373 MODEL JAAIVD010000012 pseudo 625964149 LOC116887609 alpha/beta hydrolase domain-containing protein 17C-like 18 9522897 9525712 + 116887609 MODEL JAAIVD010000013 pseudo 625964150 Asrgl1 asparaginase and isoaspartyl peptidase 1 ENCODES a protein that exhibits asparaginase activity (ortholog); beta-aspartyl-peptidase activity (ortholog); N4-(beta-N-acetylglucosaminyl)-L-asparaginase activity (ortholog); INVOLVED IN L-asparagine catabolic process via L-aspartate (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); photoreceptor inner segment (ortholog) 2 8811681 8832799 + 22301074 116890907 MODEL JAAIVD010000001;XM_032891526 XP_032747417 isoaspartyl peptidase/L-asparaginase protein-coding 625964160 LOC116890095 solute carrier family 22 member 22-like 1 231176828 231200699 + 22301074;30032202 116890095 MODEL JAAIVD010000025;XM_032890845 XP_032746736 protein-coding 625964172 LOC116895122 U4 spliceosomal RNA 2 204031670 204031812 + 116895122 MODEL JAAIVD010000001;XR_004387267 snrna 625964175 LOC116883522 histone H2B type 1-C/E/F/G/I 14 41928104 41930582 - 22301074;30032202 116883522 MODEL JAAIVD010000009;XM_032884694 XP_032740585 protein-coding 625964180 Defb119 defensin beta 119 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN innate immune response (ortholog); ASSOCIATED WITH female reproductive system disease (ortholog) 5 131898435 131905037 - 22301074;30032202 116900699 MODEL JAAIVD010000023;XM_032902402 XP_032758293 beta-defensin 119 protein-coding 625964186 KEG97_t11 tRNA-Tyr MT 5249 5314 - 64988244 trna 625964187 Ache acetylcholinesterase (Cartwright blood group) ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholinesterase activity (ortholog); cholinesterase activity (ortholog); INVOLVED IN acetylcholine catabolic process (ortholog); acetylcholine metabolic process (ortholog); acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute stress disorder (ortholog); Alzheimer's disease (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); basement membrane (ortholog) 16 16737713 16744049 - 30032202 116885201 MODEL JAAIVD010000004;XM_032886431;XM_032886432;XM_032886433 XP_032742322;XP_032742323;XP_032742324 acetylcholinesterase protein-coding 625964205 Epb41 erythrocyte membrane protein band 4.1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); actin binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN positive regulation of protein localization to cell cortex (ortholog); protein-containing complex assembly (ortholog); regulation of calcium ion transport (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Elliptocytosis 1 (ortholog); genetic disease (ortholog); hemolytic anemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) 1 26172737 26331303 + 22301074;30032202 116895635 MODEL JAAIVD010000025;XM_032896843;XM_032896847;XM_032896852;XM_032896859;XM_032896865;XM_032896870;XM_032896874;XM_032896881;XM_032896883;XM_032896890 XP_032752734;XP_032752738;XP_032752743;XP_032752750;XP_032752756;XP_032752761;XP_032752765;XP_032752772;XP_032752774;XP_032752781 protein 4.1 protein-coding 625964245 LOC116910651 U7 small nuclear RNA 9 56515578 56515621 + 116910651 MODEL JAAIVD010000002 pseudo 625964246 Nkap NFKB activating protein ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN granulocyte differentiation (ortholog); hematopoietic stem cell proliferation (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, IMPAIRED GROWTH, DYSMORPHIC FACIES, AND AXONAL NEUROPATHY (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) X 103305333 103327547 + 22301074;30032202 116888558 MODEL JAAIVD010000014;XM_032889864 XP_032745755 NF-kappa-B-activating protein protein-coding 625964259 Spsb4 splA/ryanodine receptor domain and SOCS box containing 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein polyubiquitination (ortholog); protein ubiquitination (ortholog); regulation of circadian rhythm (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 8 88392017 88462914 - 22301074;30032202 116907621 MODEL JAAIVD010000027;XM_032910676 XP_032766567 SPRY domain-containing SOCS box protein 4 protein-coding 625964266 LOC116900089 transcription factor Sp3-like 5 17431778 17505443 - 116900089 MODEL JAAIVD010000023 pseudo 625964267 LOC116907104 olfactory receptor 150-like 8 82536254 82545746 + 22301074;30032202 116907104 MODEL JAAIVD010000027;XM_032910072 XP_032765963 protein-coding 625964271 LOC116883625 glyceraldehyde-3-phosphate dehydrogenase-like 14 29721341 29722236 - 116883625 MODEL JAAIVD010000009 pseudo 625964272 LOC116888509 protein SET-like X 107333072 107334343 - 116888509 MODEL JAAIVD010000014 pseudo 625964273 Podnl1 podocan like 1 FOUND IN extracellular matrix (ortholog) 17 16155396 16168314 - 22301074;30032202 116886626 MODEL JAAIVD010000011;XM_032888133 XP_032744024 podocan-like protein 1 protein-coding 625964286 Kiaa1755 KIAA1755 ortholog ASSOCIATED WITH prostate cancer (ortholog) 5 137539953 137573152 - 116900729 MODEL JAAIVD010000023;XM_032902436 XP_032758327 uncharacterized protein KIAA1755 homolog protein-coding 625964304 LOC116898477 CB1 cannabinoid receptor-interacting protein 1-like 4 113481299 113482637 + 30032202 116898477 MODEL JAAIVD010000003;XM_032899726 XP_032755617 protein-coding 625964309 LOC116887287 olfactory receptor 2A12-like 1 38329772 38330719 + 22301074 116887287 MODEL JAAIVD010000025;XM_032888870 XP_032744761 protein-coding 625964312 LOC116908223 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-like 8 76596566 76665077 + 116908223 MODEL JAAIVD010000027 pseudo 625964313 Wars2 tryptophanyl tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits tryptophan-tRNA ligase activity (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); vasculogenesis (ortholog); PARTICIPATES IN tryptophan metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Mitochondrial Neurodevelopmental Disorder, with Abnormal Movements and Lactic Acidosis, with or without Seizures (ortholog); Parkinsonism-Dystonia, Childhood-Onset, 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 86097859 86174328 - 22301074;30032202 116905149 MODEL JAAIVD010000026;XM_032907917;XM_032907918;XM_032907919;XM_032907920 XP_032763808;XP_032763809;XP_032763810;XP_032763811 tryptophan--tRNA ligase, mitochondrial protein-coding 625964329 Ndp norrin cystine knot growth factor NDP ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN action potential (ortholog); angiogenesis (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH exudative vitreoretinopathy (ortholog); Hereditary Eye Diseases (ortholog); macular retinal edema (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) X 5226608 5251034 - 22301074;30032202 116889154 MODEL JAAIVD010000014;XM_032890320 XP_032746211 norrin protein-coding 625964336 Tmem147 transmembrane protein 147 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein localization to nuclear inner membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with Facial Dysmorphism, Absent Language, and Pseudo-Pelger-Huet Anomaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); nuclear membrane (ortholog) 2 165286847 165288748 + 116892301 MODEL JAAIVD010000001;XM_032893919 XP_032749810 protein-coding 625964347 Rab5a RAB5A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); canonical Wnt signaling pathway (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); axon terminus (ortholog) 4 90508209 90539230 + 22301074 116899225 MODEL JAAIVD010000003;XM_032900824;XM_032900825 XP_032756715;XP_032756716 ras-related protein Rab-5A protein-coding 625964359 Fras1 Fraser extracellular matrix complex subunit 1 INVOLVED IN embryonic limb morphogenesis (ortholog); metanephros morphogenesis (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); CAKUT (ortholog); clubfoot (ortholog); FOUND IN basement membrane (ortholog) 11 7484806 7735111 - 22301074 116912660 MODEL JAAIVD010000006;XM_032916779 XP_032772670 extracellular matrix protein FRAS1 protein-coding 625964435 Fam83e family with sequence similarity 83 member E ENCODES a protein that exhibits protein kinase binding (ortholog) 2 153791914 153799954 - 116892126 MODEL JAAIVD010000001;XM_032893613 XP_032749504 protein FAM83E protein-coding 625964444 LOC116910663 small nucleolar RNA R38 9 67397122 67397197 - 116910663 MODEL JAAIVD010000002;XR_004389195 snorna 625964447 LOC116912699 small nuclear ribonucleoprotein G-like 11 17802119 17802537 + 116912699 MODEL JAAIVD010000006 pseudo 625964448 LOC116906870 cytochrome P450 4F6-like 1 156972659 156989384 + 22301074 116906870 MODEL JAAIVD010000025;XM_032909781 XP_032765672 protein-coding 625964465 Zscan21 zinc finger and SCAN domain containing 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 16 15494427 15508862 + 30032202 116885699 MODEL JAAIVD010000004;XM_032887006;XM_032887007 XP_032742897;XP_032742898 zinc finger and SCAN domain-containing protein 21 protein-coding 625964476 LOC116910295 60S ribosomal protein L24-like 9 46458004 46470819 - 116910295 MODEL JAAIVD010000002 pseudo 625964477 LOC116897501 small nucleolar RNA SNORA24 3 202466885 202467013 - 116897501 MODEL JAAIVD010000012;XR_004387522 snorna 625964480 Zer1 zyg-11 related cell cycle regulator INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog) 22301074;30032202 116889755 MODEL JAAIVD010000081;XM_032890616 XP_032746507 protein zer-1 homolog protein-coding 625964481 LOC116889809 50S ribosomal protein L3-like 22301074;30032202 116889809 MODEL JAAIVD010000764;XM_032890656 XP_032746547 protein-coding 625964482 LOC116911714 translation initiation factor IF-2-like 10 62226200 62227068 - 116911714 MODEL JAAIVD010000005;XM_032915685 XP_032771576 protein-coding 625964487 LOC116884574 rho-related GTP-binding protein RhoG-like 15 47196519 47197153 - 116884574 MODEL JAAIVD010000010 pseudo 625964488 LOC116906314 U6 spliceosomal RNA 7 95729400 95729508 + 116906314 MODEL JAAIVD010000026;XR_004388602 snrna 625964491 Tnfaip8 TNF alpha induced protein 8 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); molecular sequestering activity (ortholog); small molecule binding (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog) 15 36553671 36667667 - 22301074;30032202 116884680 MODEL JAAIVD010000010;XM_032885856;XM_032885857;XM_032885858 XP_032741747;XP_032741748;XP_032741749 tumor necrosis factor alpha-induced protein 8 protein-coding 625964503 Fyco1 FYVE and coiled-coil domain autophagy adaptor 1 INVOLVED IN plus-end-directed vesicle transport along microtubule (ortholog); positive regulation of autophagosome maturation (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 18 (ortholog); Eye Abnormalities (ortholog); FOUND IN autophagosome (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) 8 114892119 114959137 - 22301074;30032202 116908032 MODEL JAAIVD010000027;XM_032911300 XP_032767191 FYVE and coiled-coil domain-containing protein 1 protein-coding 625964525 Plch1 phospholipase C eta 1 ENCODES a protein that exhibits calcium-dependent phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol-mediated signaling (ortholog); ASSOCIATED WITH Holoprosencephaly 14 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 3 91342012 91537700 + 22301074;30032202 116896827 MODEL JAAIVD010000012;XM_032898305 XP_032754196 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-1 protein-coding 625964553 LOC116900020 odorant-binding protein 2a-like 5 11370979 11378549 - 30032202 116900020 MODEL JAAIVD010000023;XM_032901818 XP_032757709 protein-coding 625964561 Hoxd11 homeobox D11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bone development disease (ortholog); Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 5 52023890 52025649 + 22301074;30032202 116900209 MODEL JAAIVD010000023;XM_032901964 XP_032757855 homeobox protein Hox-D11 protein-coding 625964565 C1qbp complement C1q binding protein ENCODES a protein that exhibits adrenergic receptor binding (ortholog); C5-methylcytidine-containing RNA reader activity (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); double-strand break repair via homologous recombination (ortholog); mitochondrial RNA catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 33 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 50602333 50607079 - 22301074;30032202 116909122 MODEL JAAIVD010000002;XM_032912597 XP_032768488 complement component 1 Q subcomponent-binding protein, mitochondrial protein-coding 625964575 LOC116909549 CMRF35-like molecule 2 9 69043662 69051125 + 116909549 MODEL JAAIVD010000002 pseudo 625964576 Cap2 cyclase associated actin cytoskeleton regulatory protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN presynaptic actin cytoskeleton organization (ortholog); regulation of modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Dilated Cardiomyopathy 2I (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); postsynaptic density (ortholog) 14 65479979 65626518 + 22301074;30032202 116883408 MODEL JAAIVD010000009;XM_032884533 XP_032740424 adenylyl cyclase-associated protein 2 protein-coding 625964593 Ngfr nerve growth factor receptor ENCODES a protein that exhibits amyloid-beta binding (ortholog); calmodulin binding (ortholog); coreceptor activity (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to amyloid-beta (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); clathrin-coated endocytic vesicle (ortholog) 9 58799000 58816269 + 30032202 116910147 MODEL JAAIVD010000002;XM_032913996 XP_032769887 tumor necrosis factor receptor superfamily member 16 protein-coding 625964603 LOC116893418 vomeronasal type-1 receptor 4-like 2 174623801 174635554 - 116893418 MODEL JAAIVD010000001 pseudo 625964604 LOC116897640 U2 spliceosomal RNA 3 131275663 131275852 + 116897640 MODEL JAAIVD010000012;XR_004387619 snrna 625964607 Slc6a15 solute carrier family 6 member 15 ENCODES a protein that exhibits branched-chain amino acid:sodium symporter activity (ortholog); neutral L-amino acid:sodium symporter activity (ortholog); proline:sodium symporter activity (ortholog); INVOLVED IN L-leucine transport (ortholog); neutral amino acid transport (ortholog); proline transport (ortholog); FOUND IN membrane (ortholog) 1 181768286 181820919 + 22301074;30032202 116908629 MODEL JAAIVD010000025;XM_032911883 XP_032767774 sodium-dependent neutral amino acid transporter B(0)AT2 protein-coding 625964623 LOC116909386 60S ribosomal protein L21-like 9 51528610 51529004 + 116909386 MODEL JAAIVD010000002 pseudo 625964624 Ubxn7 UBX domain protein 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase binding (ortholog); FOUND IN nucleoplasm (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 4 17141769 17202489 + 30032202 116898772 MODEL JAAIVD010000003;XM_032900108 XP_032755999 UBX domain-containing protein 7 protein-coding 625964639 LOC116912751 uncharacterized LOC116912751 11 64761276 64764775 + 116912751 MODEL JAAIVD010000006;XR_004389477 ncrna 625964644 LOC116889892 non-histone chromosomal protein HMG-17-like 1 244505567 244512241 + 116889892 MODEL JAAIVD010000025 pseudo 625964645 Itgb8 integrin subunit beta 8 ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cartilage development (ortholog); cell migration (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); endometriosis (ortholog); Familial Prostate Cancer (ortholog); FOUND IN cell surface (ortholog); integrin alphav-beta8 complex (ortholog) 7 116906842 116986340 + 30032202 116905392 MODEL JAAIVD010000026;XM_032908342 XP_032764233 integrin beta-8 protein-coding 625964663 LOC116900551 olfactory receptor 4K3-like 5 89846296 89847237 - 22301074 116900551 MODEL JAAIVD010000023;XM_032902277 XP_032758168 protein-coding 625964667 LOC116906793 glutathione S-transferase alpha-2-like 8 72512249 72524429 - 22301074;30032202 116906793 MODEL JAAIVD010000027;XM_032909659 XP_032765550 protein-coding 625964678 LOC116890634 U2 spliceosomal RNA 1 42475152 42475323 - 116890634 MODEL JAAIVD010000025 pseudo 625964679 Synpo synaptopodin ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN positive regulation of actin filament bundle assembly (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); regulation of long-term neuronal synaptic plasticity (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); focal segmental glomerulosclerosis 8 (ortholog); glomerulosclerosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); cytosol (ortholog) 15 71315914 71350161 + 30032202 116884445 MODEL JAAIVD010000010;XM_032885540 XP_032741431 protein-coding 625964686 LOC116885274 serine/threonine-protein kinase Chk2-like 16 43112051 43131891 - 116885274 MODEL JAAIVD010000004 pseudo 625964687 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 100483335 100483406 - 116902674 MODEL JAAIVD010000023 trna 625964688 Rnf144b ring finger protein 144B ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial membrane (ortholog) 14 66188620 66242157 + 22301074;30032202 116883431 MODEL JAAIVD010000009;XM_032884567;XM_032884569 XP_032740458;XP_032740460 E3 ubiquitin-protein ligase RNF144B protein-coding 625964704 Rasa2 RAS p21 protein activator 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog); Noonan syndrome (ortholog) 8 87987393 88087481 - 22301074;7935405 116907053 MODEL D30734;JAAIVD010000027;XM_032910008 BAA06398;XP_032765899 Ras GTPase-activating protein;ras GTPase-activating protein 2 protein-coding 625964732 LOC116900201 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like 5 51324728 51324987 - 116900201 MODEL JAAIVD010000023 pseudo 625964733 LOC116905555 mitochondrial RNA pseudouridine synthase Rpusd4-like 7 24157844 24161839 - 116905555 MODEL JAAIVD010000026 pseudo 625964734 Ugt1a1 UDP glucuronosyltransferase family 1 member A1 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN acute-phase response (ortholog); animal organ regeneration (ortholog); bilirubin conjugation (ortholog); PARTICIPATES IN axitinib pharmacokinetics pathway; codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); autism spectrum disorder (ortholog); FOUND IN cytochrome complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 4 160244579 160251687 + 22301074 116899622 MODEL JAAIVD010000003;XM_032901584 XP_032757475 UDP-glucuronosyltransferase 1-1 protein-coding 625964743 LOC116900365 olfactory receptor 5I1 5 69387875 69388819 + 22301074;30032202 116900365 MODEL JAAIVD010000023;XM_032902114 XP_032758005 protein-coding 625964746 LOC116885855 translationally-controlled tumor protein-like 16 3672713 3673427 - 116885855 MODEL JAAIVD010000004 pseudo 625964747 Tas2r4 taste 2 receptor member 4 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); respiratory gaseous exchange by respiratory system (ortholog) 6 99315238 99316296 - 22301074;30032202 116902885 MODEL JAAIVD010000024;XM_032905217 XP_032761108 taste receptor type 2 member 4 protein-coding 625964751 LOC116902798 peptidyl-prolyl cis-trans isomerase D-like 6 83174388 83175903 + 116902798 MODEL JAAIVD010000024 pseudo 625964752 Tpm2 tropomyosin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of ATP-dependent activity (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital myopathy 4A (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog) 1 2972768 2982089 + 30032202 116891031 MODEL JAAIVD010000025;XM_032891716;XM_032891723;XM_032891731;XM_032891739 XP_032747607;XP_032747614;XP_032747622;XP_032747630 tropomyosin beta chain protein-coding 625964775 Lrrc75b leucine rich repeat containing 75B 18 11883728 11890361 + 116887246 MODEL JAAIVD010000013;XM_032888813 XP_032744704 leucine-rich repeat-containing protein 75B protein-coding 625964783 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 5347286 5347358 - 116914205 MODEL JAAIVD010000007 trna 625964784 Mlh3 mutL homolog 3 ENCODES a protein that exhibits centromeric DNA binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA damage response (ortholog); female meiosis I (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mismatch repair pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN chiasma (ortholog); condensed chromosome (ortholog); condensed nuclear chromosome (ortholog) 7 99343594 99378474 - 22301074;30032202 116905291 MODEL JAAIVD010000026;XM_032908153;XM_032908154;XM_032908155;XM_032908156 XP_032764044;XP_032764045;XP_032764046;XP_032764047 DNA mismatch repair protein Mlh3 protein-coding 625964808 Eya3 EYA transcriptional coactivator and phosphatase 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AXY142 phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); response to ionizing radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 25514954 25581855 - 22301074;30032202 116895422 MODEL JAAIVD010000025;XM_032896704;XM_032896711 XP_032752595;XP_032752602 eyes absent homolog 3 protein-coding 625964832 Rap2b RAP2B, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); platelet activation (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytosol (ortholog) 3 93731426 93732860 - 22301074;30032202 116896832 MODEL JAAIVD010000012;XM_032898314 XP_032754205 ras-related protein Rap-2b protein-coding 625964837 LOC116913750 40S ribosomal protein S17-like 12 58838256 58838698 - 22301074;30032202 116913750 MODEL JAAIVD010000007;XM_032918057 XP_032773948 protein-coding 625964841 LOC116911150 serpin B8 10 86099103 86124658 - 30032202 116911150 MODEL JAAIVD010000005;XM_032915005 XP_032770896 protein-coding 625964852 Tgfbr3l transforming growth factor beta receptor 3 like 16 2381764 2384462 + 116885217 MODEL JAAIVD010000004;XM_032886452;XM_032886453 XP_032742343;XP_032742344 transforming growth factor-beta receptor type 3-like protein protein-coding 625964865 LOC116896114 small proline-rich protein 2I-like 3 760906 761151 - 22301074 116896114 MODEL JAAIVD010000012;XM_032897078 XP_032752969 protein-coding 625964868 Fam204a family with sequence similarity 204 member A 2 55921435 55950606 + 116891309 MODEL JAAIVD010000001;XM_032892222 XP_032748113 protein FAM204A protein-coding 625964880 LOC116887114 keratin-associated protein 12-1-like 18 1053523 1053825 + 22301074 116887114 MODEL JAAIVD010000013;XM_032888657 XP_032744548 protein-coding 625964883 Hoxd10 homeobox D10 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); congenital vertical talus (ortholog); Disease Progression (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 52033404 52036612 + 22301074;30032202 116900210 MODEL JAAIVD010000023;XM_032901965 XP_032757856 homeobox protein Hox-D10 protein-coding 625964889 Prdx3 peroxiredoxin 3 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to reactive oxygen species (ortholog); hydrogen peroxide catabolic process (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 32 (ortholog); CORNEAL DYSTROPHY, PUNCTIFORM AND POLYCHROMATIC PRE-DESCEMET (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 2 55279010 55291758 + 30032202 116891303 MODEL JAAIVD010000001;XM_032892212 XP_032748103 thioredoxin-dependent peroxide reductase, mitochondrial protein-coding 625964900 LOC116895216 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5 3 8772645 8810171 + 22301074;30032202 116895216 MODEL JAAIVD010000012;XM_032896547 XP_032752438 protein-coding 625964907 Fbxo30 F-box protein 30 INVOLVED IN chromatin organization (ortholog); chromosome condensation (ortholog); chromosome segregation (ortholog) 2 225930719 225941720 - 22301074;30032202 116893020 MODEL JAAIVD010000001;XM_032894980 XP_032750871 F-box only protein 30 protein-coding 625964913 Arhgap39 Rho GTPase activating protein 39 INVOLVED IN postsynapse organization (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 1 249051618 249203177 - 22301074;30032202 116913411 MODEL JAAIVD010000025;XM_032917598;XM_032917606 XP_032773489;XP_032773497 rho GTPase-activating protein 39 protein-coding 625964930 LOC116896948 uncharacterized LOC116896948 1 34484098 34491484 + 116896948 MODEL JAAIVD010000025;XR_004387383 ncrna 625964935 LOC116883898 uncharacterized LOC116883898 14 42559520 42568180 + 22301074;30032202 116883898 MODEL JAAIVD010000009;XM_032885166 XP_032741057 uncharacterized protein LOC116883898 protein-coding 625964943 LOC116904514 60S ribosomal protein L15-like 6 6776856 6777524 - 116904514 MODEL JAAIVD010000024;XR_004388340 pseudo 625964946 LOC116903872 ATP synthase subunit delta, mitochondrial-like 6 92945206 92945706 - 22301074;30032202 116903872 MODEL JAAIVD010000024;XM_032906625 XP_032762516 protein-coding 625964949 Mroh1 maestro heat like repeat family member 1 ENCODES a protein that exhibits membrane destabilizing activity (ortholog); INVOLVED IN lysosome fission (ortholog); FOUND IN lysosomal membrane (ortholog) 1 248726833 248785271 + 22301074;30032202 116913201 MODEL JAAIVD010000025;XM_032917388;XM_032917391 XP_032773279;XP_032773282 maestro heat-like repeat-containing protein family member 1 protein-coding 625964995 LOC116884892 60S ribosomal protein L21-like 15 72827804 72828982 - 116884892 MODEL JAAIVD010000010 pseudo 625964996 LOC116896017 ferritin light chain 1-like 3 177484160 177484802 + 116896017 MODEL JAAIVD010000012 pseudo 625964997 LOC116903467 uncharacterized LOC116903467 6 47380825 47404210 + 116903467 MODEL JAAIVD010000024;XR_004388278 ncrna 625965002 Bdkrb1 bradykinin receptor B1 ENCODES a protein that exhibits bradykinin receptor activity (ortholog); peptide binding (ortholog); INVOLVED IN cell migration (ortholog); cyclooxygenase pathway (ortholog); negative regulation of blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; kallikrein-kinin cascade pathway; ASSOCIATED WITH Diabetes Complications (ortholog); diabetic angiopathy (ortholog); diabetic neuropathy (ortholog) 7 123263513 123265973 + 22301074;30032202 116904868 MODEL JAAIVD010000026;XM_032907460 XP_032763351 B1 bradykinin receptor protein-coding 625965008 Rbm15b RNA binding motif protein 15B ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); mRNA export from nucleus (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nuclear envelope (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 8 98197149 98204217 - 30032202 116907504 MODEL JAAIVD010000027;XM_032910504 XP_032766395 putative RNA-binding protein 15B protein-coding 625965013 Chac1 ChaC glutathione specific gamma-glutamylcyclotransferase 1 ENCODES a protein that exhibits glutathione specific gamma-glutamylcyclotransferase activity (ortholog); Notch binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network (ortholog) 5 97530042 97533282 + 22301074;30032202 116901809 MODEL JAAIVD010000023;XM_032903969 XP_032759860 glutathione-specific gamma-glutamylcyclotransferase 1 protein-coding 625965020 LOC116907272 poly(rC)-binding protein 2-like 8 15655918 15662183 - 116907272 MODEL JAAIVD010000027 pseudo 625965021 Znf740 zinc finger protein 740 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 1 260858198 260868926 - 30032202 116883549 MODEL JAAIVD010000025;XM_032884724;XM_032884733;XM_032884740;XM_032884748;XM_032884755;XM_032884759;XM_032884767 XP_032740615;XP_032740624;XP_032740631;XP_032740639;XP_032740646;XP_032740650;XP_032740658 protein-coding 625965044 Aamdc adipogenesis associated Mth938 domain containing INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog) 2 95872567 95902019 - 30032202 116891703 MODEL JAAIVD010000001;XM_032892967 XP_032748858 mth938 domain-containing protein protein-coding 625965052 Sla Src like adaptor PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); vitiligo (ortholog) 1 240894223 240944866 - 22301074 116912283 MODEL JAAIVD010000025;XM_032916282;XM_032916290;XM_032916297 XP_032772173;XP_032772181;XP_032772188 src-like-adapter protein-coding 625965070 Gsc goosecoid homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); dorsal/ventral neural tube patterning (ortholog); ear development (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Short Stature, Auditory Canal Atresia, Mandibular Hypoplasia, Skeletal Abnormalities (ortholog); FOUND IN transcription regulator complex (ortholog) 7 115540926 115542971 - 22301074;30032202 116905880 MODEL JAAIVD010000026;XM_032908869 XP_032764760 homeobox protein goosecoid protein-coding 625965077 LOC116911806 small nucleolar RNA SNORD47 10 40327447 40327524 + 116911806 MODEL JAAIVD010000005;XR_004389346 snorna 625965080 LOC116910541 pre-mRNA-splicing factor SPF27-like 1 209023376 209026285 + 116910541 MODEL JAAIVD010000025 pseudo 625965081 LOC116894976 small nucleolar RNA SNORA20 2 53393703 53393830 + 116894976 MODEL JAAIVD010000001;XR_004387167 snorna 625965084 LOC116893295 60S acidic ribosomal protein P0-like 2 149268060 149268420 - 30032202 116893295 MODEL JAAIVD010000001;XM_032895125 XP_032751016 protein-coding 625965088 LOC116902687 DNA methyltransferase 1-associated protein 1-like 6 39792931 39794372 - 116902687 MODEL JAAIVD010000024 pseudo 625965089 LOC116909166 olfactory receptor 15 ENCODES a protein that exhibits odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); FOUND IN cell cortex (ortholog); membrane (ortholog) 9 17999362 18000300 - 22301074 116909166 MODEL JAAIVD010000002;XM_032912656 XP_032768547 protein-coding 625965092 LOC116884778 non-histone chromosomal protein HMG-17-like 15 30810905 30811229 + 116884778 MODEL JAAIVD010000010 pseudo 625965093 LOC116915157 U4 spliceosomal RNA 13 32202474 32202584 - 116915157 MODEL JAAIVD010000008 pseudo 625965094 LOC116906441 uncharacterized LOC116906441 1 156217457 156219853 + 116906441 MODEL JAAIVD010000025;XR_004388705 ncrna 625965099 LOC116906371 small nucleolar RNA SNORD113/SNORD114 family 7 127266508 127266582 + 116906371 MODEL JAAIVD010000026;XR_004388640 snorna 625965102 LOC116903191 uncharacterized LOC116903191 6 18066022 18066660 + 116903191 MODEL JAAIVD010000024;XR_004388258 ncrna 625965106 Nrcam neuronal cell adhesion molecule ENCODES a protein that exhibits ankyrin binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); glutamatergic synapse (ortholog) 7 58188046 58268286 + 30032202 116905009 MODEL JAAIVD010000026;XM_032907694;XM_032907695 XP_032763585;XP_032763586 protein-coding 625965147 Mylk4 myosin light chain kinase family member 4 ASSOCIATED WITH long QT syndrome (ortholog) 14 51734783 51809238 - 22301074;30032202 116883729 MODEL JAAIVD010000009;XM_032884962;XM_032884963 XP_032740853;XP_032740854 protein-coding 625965167 Galnt6 polypeptide N-acetylgalactosaminyltransferase 6 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via threonine (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 1 262380973 262419408 + 30032202 116883903 MODEL JAAIVD010000025;XM_032885169;XM_032885171;XM_032885177 XP_032741060;XP_032741062;XP_032741068 protein-coding 625965189 LOC116914695 uncharacterized LOC116914695 13 1576209 1578375 + 116914695 MODEL JAAIVD010000008;XR_004389762 ncrna 625965193 LOC116891762 T-cell ecto-ADP-ribosyltransferase 2 2 99889103 99896866 - 22301074;30032202 116891762 MODEL JAAIVD010000001;XM_032893087 XP_032748978 protein-coding 625965201 Ap1b1 adaptor related protein complex 1 subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Ichthyosiform Erythroderma, Corneal Involvement, Deafness (ortholog); Kartagener syndrome (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); synaptic vesicle (ortholog) 11 73962157 74014149 + 22301074;30032202 116912150 MODEL JAAIVD010000006;XM_032916063 XP_032771954 AP-1 complex subunit beta-1 protein-coding 625965229 Rspo2 R-spondin 2 ENCODES a protein that exhibits heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN bone mineralization (ortholog); dopaminergic neuron differentiation (ortholog); embryonic forelimb morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Humerofemoral Hypoplasia with Radiotibial Ray Deficiency (ortholog); tetraamelia syndrome (ortholog); tetraamelia syndrome 2 (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog) 1 217619226 217755111 - 116911091 MODEL JAAIVD010000025;XM_032914924;XM_032914931;XM_032914940 XP_032770815;XP_032770822;XP_032770831 R-spondin-2 protein-coding 625965246 Elapor1 endosome-lysosome associated apoptosis and autophagy regulator 1 INVOLVED IN autophagosome assembly (ortholog); cellular response to starvation (ortholog); positive regulation of autophagosome assembly (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) 3 49725679 49800598 + 30032202 116896358 MODEL JAAIVD010000012;XM_032897465;XM_032897466 XP_032753356;XP_032753357 UPF0577 protein KIAA1324 homolog protein-coding 625965275 Astn2 astrotactin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN establishment of body hair planar orientation (ortholog); negative regulation of protein localization to cell surface (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autistic disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); FOUND IN cell pole (ortholog); endosome (ortholog); membrane (ortholog) 1 87513759 88317135 + 22301074;30032202 116901198 MODEL JAAIVD010000025;XM_032902906 XP_032758797 astrotactin-2 protein-coding 625965300 LOC116910359 olfactory receptor 6C1-like 1 161649146 161650070 - 116910359 MODEL JAAIVD010000025 pseudo 625965301 Ccz1 CCZ1 vacuolar protein trafficking and biogenesis associated ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN Mon1-Ccz1 complex (ortholog) 16 9167281 9191610 + 22301074;30032202 116885391 MODEL JAAIVD010000004;XM_032886670;XM_032886671 XP_032742561;XP_032742562 CCZ1 homolog, vacuolar protein trafficking and biogenesis associated;vacuolar fusion protein CCZ1 homolog protein-coding 625965323 LOC116888441 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like X 110034197 110034778 - 116888441 MODEL JAAIVD010000014 pseudo 625965324 LOC116887557 H-2 class I histocompatibility antigen, alpha chain-like 18 8456909 8459143 - 30032202 116887557 MODEL JAAIVD010000013;XM_032889186 XP_032745077 protein-coding 625965330 Maob monoamine oxidase B ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); identical protein binding (ortholog); monoamine oxidase activity (ortholog); INVOLVED IN negative regulation of serotonin secretion (ortholog); phenylethylamine catabolic process (ortholog); positive regulation of dopamine metabolic process (ortholog); PARTICIPATES IN citalopram pharmacodynamics pathway; citalopram pharmacokinetics pathway; Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Amyloid Plaques (ortholog); autistic disorder (ortholog); FOUND IN dendrite (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 5063120 5167820 - 22301074 116889054 MODEL JAAIVD010000014;XM_032890243 XP_032746134 amine oxidase [flavin-containing] B protein-coding 625965350 Pde5a phosphodiesterase 5A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); cGMP binding (ortholog); INVOLVED IN cGMP catabolic process (ortholog); cGMP metabolic process (ortholog); negative regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); Hearing Loss (ortholog) 3 36956410 37094029 - 22301074;30032202 116896296 MODEL JAAIVD010000012;XM_032897379 XP_032753270 cGMP-specific 3',5'-cyclic phosphodiesterase protein-coding 625965375 Adnp2 ADNP homeobox 2 INVOLVED IN nervous system development (ortholog) 15 52081481 52108769 + 22301074;30032202 116884256 MODEL JAAIVD010000010;XM_032885339;XM_032885340 XP_032741230;XP_032741231 activity-dependent neuroprotector homeobox protein 2 protein-coding 625965386 LOC116887157 guanine nucleotide-binding protein-like 3 18 42458344 42460353 - 116887157 MODEL JAAIVD010000013 pseudo 625965387 LOC116899788 U6 spliceosomal RNA 4 159247222 159247320 - 116899788 MODEL JAAIVD010000003 pseudo 625965388 LOC116910899 dimethylaniline monooxygenase [N-oxide-forming] 5-like 10 45557883 45569275 - 22301074;30032202 116910899 MODEL JAAIVD010000005;XM_032914665 XP_032770556 protein-coding 625965398 Zfand2a zinc finger AN1-type containing 2A INVOLVED IN cellular response to arsenic-containing substance (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN proteasome complex (ortholog) 16 13716365 13725198 + 22301074;30032202 116885454 MODEL JAAIVD010000004;XM_032886738 XP_032742629 AN1-type zinc finger protein 2A protein-coding 625965408 LOC116894028 olfactory receptor 51V1-like 2 102041981 102042922 + 22301074 116894028 MODEL JAAIVD010000001;XM_032895745 XP_032751636 protein-coding 625965411 LOC116904370 elongation factor 1-beta-like 6 86744788 86745451 - 116904370 MODEL JAAIVD010000024 pseudo 625965412 Lgsn lengsin, lens protein with glutamine synthetase domain FOUND IN plasma membrane (ortholog) 4 107902350 107916554 + 22301074;30032202 116898468 MODEL JAAIVD010000003;XM_032899721 XP_032755612 lengsin protein-coding 625965420 Atraid all-trans retinoic acid induced differentiation factor ENCODES a protein that exhibits xenobiotic transmembrane transporter activity (ortholog); INVOLVED IN negative regulation of osteoblast proliferation (ortholog); negative regulation of protein catabolic process (ortholog); positive regulation of bone mineralization (ortholog); FOUND IN lysosomal membrane (ortholog); nuclear envelope (ortholog); perinuclear region of cytoplasm (ortholog) 7 23023777 23028578 - 30032202 116905987 MODEL JAAIVD010000026;XM_032909017 XP_032764908 all-trans retinoic acid-induced differentiation factor protein-coding 625965431 LOC116899381 nucleophosmin-like 4 124366203 124367153 + 30032202 116899381 MODEL JAAIVD010000003;XM_032901098 XP_032756989 protein-coding 625965435 LOC116885174 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like 16 33186165 33186376 - 116885174 MODEL JAAIVD010000004 pseudo 625965436 LOC116886761 5S ribosomal RNA 17 43165805 43165924 - 116886761 MODEL JAAIVD010000011;XR_004386162 rrna 625965439 LOC116910352 CMRF35-like molecule 3 9 69197939 69204215 + 116910352 MODEL JAAIVD010000002 pseudo 625965440 LOC116908457 U6 spliceosomal RNA 8 57423098 57423204 + 116908457 MODEL JAAIVD010000027;XR_004388975 snrna 625965443 Zcchc10 zinc finger CCHC-type containing 10 9 35806770 35816977 + 22301074 116910080 MODEL JAAIVD010000002;XM_032913896 XP_032769787 zinc finger CCHC domain-containing protein 10 protein-coding 625965451 LOC116887881 actin, muscle-like X 49152108 49152742 - 116887881 MODEL JAAIVD010000014 pseudo 625965452 LOC116913953 protein CEBPZOS-like 12 70169611 70169848 + 116913953 MODEL JAAIVD010000007 pseudo 625965453 LOC116886164 40S ribosomal protein S18-like 17 29899063 29899528 + 116886164 MODEL JAAIVD010000011 pseudo 625965454 Slc17a8 solute carrier family 17 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN cochlea development (ortholog); L-glutamate import (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 25 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); cochlear disease (ortholog); FOUND IN apical dendrite (ortholog); axon terminus (ortholog); basal dendrite (ortholog) 1 168635473 168684898 - 22301074;30032202 116907882 MODEL JAAIVD010000025;XM_032911074;XM_032911083 XP_032766965;XP_032766974 vesicular glutamate transporter 3 protein-coding 625965475 Mitf melanocyte inducing transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN bone remodeling (ortholog); camera-type eye development (ortholog); cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); Camurati-Engelmann disease (ortholog); COLOBOMA, OSTEOPETROSIS, MICROPHTHALMIA, MACROCEPHALY, ALBINISM, AND DEAFNESS (ortholog); FOUND IN cytoplasm (ortholog); lysosomal membrane (ortholog); nucleus (ortholog) 6 49041975 49244249 - 22301074;30032202 116903470 MODEL JAAIVD010000024;XM_032906032;XM_032906033;XM_032906034;XM_032906035 XP_032761923;XP_032761924;XP_032761925;XP_032761926 microphthalmia-associated transcription factor protein-coding 625965494 LOC116884575 polyglutamine-binding protein 1-like 15 47397125 47397941 + 116884575 MODEL JAAIVD010000010 pseudo 625965495 LOC116908778 group 10 secretory phospholipase A2 9 8783779 8795177 - 22301074;30032202 116908778 MODEL JAAIVD010000002;XM_032912150 XP_032768041 protein-coding 625965503 Spata17 spermatogenesis associated 17 10 65165487 65338714 - 22301074;30032202 116911709 MODEL JAAIVD010000005;XM_032915678 XP_032771569 spermatogenesis-associated protein 17 protein-coding 625965517 LOC116913476 granzyme-like protein 1 12 68685661 68688645 + 22301074;30032202 116913476 MODEL JAAIVD010000007;XM_032917679 XP_032773570 protein-coding 625965526 LOC116897367 centromere protein R-like 3 222201720 222204329 + 116897367 MODEL JAAIVD010000012;XR_004387425 pseudo 625965529 LOC116910952 BEN domain-containing protein 3-like 10 80757112 80761114 - 116910952 MODEL JAAIVD010000005 pseudo 625965530 Selenop selenoprotein P ENCODES a protein that exhibits selenium binding (ortholog); INVOLVED IN brain development (ortholog); locomotory behavior (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH adenoma (ortholog); Animal Mammary Neoplasms (ortholog); Cadmium Poisoning (ortholog); FOUND IN extracellular space (ortholog) 3 176747324 176757328 - 30032202 116897161 MODEL JAAIVD010000012;XM_032898831;XM_032898832 XP_032754722;XP_032754723 protein-coding 625965541 Uevld UEV and lactate/malate dehyrogenase domains 2 152422729 152451935 + 22301074;30032202 116892092 MODEL JAAIVD010000001;XM_032893567 XP_032749458 ubiquitin-conjugating enzyme E2 variant 3 protein-coding 625965557 Mast3 microtubule associated serine/threonine kinase 3 ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 108 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog) 13 13020149 13047313 - 22301074;30032202 116914395 MODEL JAAIVD010000008;XM_032918612;XM_032918613;XM_032918614;XM_032918615;XM_032918616;XM_032918618;XM_032918619;XM_032918620;XM_032918621;XM_032918622 XP_032774503;XP_032774504;XP_032774505;XP_032774506;XP_032774507;XP_032774509;XP_032774510;XP_032774511;XP_032774512;XP_032774513 microtubule-associated serine/threonine-protein kinase 3 protein-coding 625965608 Armcx4 armadillo repeat containing X-linked 4 X 86981930 86992333 + 22301074 116888049 MODEL JAAIVD010000014;XM_032889443 XP_032745334 armadillo repeat-containing X-linked protein 4 protein-coding 625965615 LOC116907357 uncharacterized LOC116907357 8 53174250 53176395 + 116907357 MODEL JAAIVD010000027;XR_004388818 ncrna 625965621 LOC116897979 histone H2A.V-like 4 52668394 52668863 + 22301074;30032202 116897979 MODEL JAAIVD010000003;XM_032899382;XM_032899383;XM_032899384 XP_032755273;XP_032755274;XP_032755275 protein-coding 625965633 LOC116896248 UPF0183 protein C16orf70 homolog 3 28267028 28268345 + 116896248 MODEL JAAIVD010000012 pseudo 625965634 LOC116912914 THO complex subunit 2-like 11 14575506 14596382 + 30032202 116912914 MODEL JAAIVD010000006;XM_032917170;XM_032917171;XM_032917172;XM_032917173;XM_032917175 XP_032773061;XP_032773062;XP_032773063;XP_032773064;XP_032773066 protein-coding 625965654 Adgrf2 adhesion G protein-coupled receptor F2 INVOLVED IN amelogenesis (ortholog); enamel mineralization (ortholog); gene expression (ortholog); ASSOCIATED WITH autistic disorder (ortholog) 4 93359437 93369584 + 22301074 116898438 MODEL JAAIVD010000003;XM_032899709 XP_032755600 adhesion G-protein coupled receptor F2 protein-coding 625965661 LOC116903030 transmembrane emp24 domain-containing protein 10-like 6 158487263 158487905 - 116903030 MODEL JAAIVD010000024 pseudo 625965662 Tbc1d17 TBC1 domain family member 17 INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog) 2 154693416 154702075 + 30032202 116892190 MODEL JAAIVD010000001;XM_032893716 XP_032749607 protein-coding 625965683 Pank1 pantothenate kinase 1 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); pantothenate kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cell periphery (ortholog); clathrin coat (ortholog); cytoplasm (ortholog) 2 34422365 34491054 - 22301074;30032202 116891112 MODEL JAAIVD010000001;XM_032891825;XM_032891826;XM_032891827 XP_032747716;XP_032747717;XP_032747718 protein-coding 625965700 Scaf1 SR-related CTD associated factor 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA polymerase II C-terminal domain binding (ortholog); INVOLVED IN mRNA processing (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); end stage renal disease (ortholog) 2 154529051 154542114 + 30032202 116892176 MODEL JAAIVD010000001;XM_032893685;XM_032893686 XP_032749576;XP_032749577 splicing factor, arginine/serine-rich 19 protein-coding 625965718 Cep78 centrosomal protein 78 INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); negative regulation of protein ubiquitination (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Cone-Rod Dystrophy and Hearing Loss (ortholog); Cone-Rod Dystrophy and Hearing Loss 1 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 15894432 15923027 - 22301074;30032202 116891002 MODEL JAAIVD010000001;XM_032891681 XP_032747572 centrosomal protein of 78 kDa protein-coding 625965737 Cep128 centrosomal protein 128 INVOLVED IN intracellular protein localization (ortholog); regulation of gene expression (ortholog); sperm flagellum assembly (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) 7 104210591 104558652 - 116905331 MODEL JAAIVD010000026;XM_032908227 XP_032764118 centrosomal protein of 128 kDa protein-coding 625965767 LOC116889605 testis-specific Y-encoded protein 1 Y 1589675 1592990 + 22301074;30032202 116889605 MODEL JAAIVD010000015;XM_032890536 XP_032746427 protein-coding 625965777 Krt4 keratin 4 INVOLVED IN cytoskeleton organization (ortholog); epithelial cell differentiation (ortholog); negative regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); genetic disease (ortholog); Genetic Skin Diseases (ortholog); FOUND IN cell surface (ortholog); intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 1 261155461 261161063 + 22301074;30032202 116890201 MODEL JAAIVD010000025;XM_032890935;XM_032890936 XP_032746826;XP_032746827 keratin, type II cytoskeletal 4 protein-coding 625965794 LOC116884083 small nucleolar RNA SNORA17 14 39469525 39469653 - 116884083 MODEL JAAIVD010000009;XR_004385827 snorna 625965797 Prrx2 paired related homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN artery morphogenesis (ortholog); cartilage development (ortholog); embryonic cranial skeleton morphogenesis (ortholog) 5 4740114 4775928 - 22301074 116900054 MODEL JAAIVD010000023;XM_032901847;XM_032901848 XP_032757738;XP_032757739 paired mesoderm homeobox protein 2 protein-coding 625965808 LOC116900686 calcineurin subunit B type 1-like 5 129580644 129581376 + 116900686 MODEL JAAIVD010000023 pseudo 625965809 LOC116912347 transmembrane protease serine 11G 11 78494329 78533400 + 22301074 116912347 MODEL JAAIVD010000006;XM_032916399;XM_032916400 XP_032772290;XP_032772291 protein-coding 625965824 COX1 MT 5316 6860 + 7751801 A0A7T7FNV2;B7SE63;N0DKW5 REVIEWED EU273707 ABX45235;YP_002791018 COI cytochrome c oxidase subunit I protein-coding 625965825 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 23197060 23197148 - 116906525 MODEL JAAIVD010000026 trna 625965826 Frem1 FRAS1 related extracellular matrix 1 INVOLVED IN cell-matrix adhesion (ortholog); craniofacial suture morphogenesis (ortholog); ASSOCIATED WITH anterior segment dysgenesis 5 (ortholog); Axenfeld-Rieger syndrome (ortholog); Bifid Nose (ortholog); FOUND IN basement membrane (ortholog) 1 70710759 70829496 + 22301074 116900657 MODEL JAAIVD010000025;XM_032902365;XM_032902370;XM_032902378 XP_032758256;XP_032758261;XP_032758269 FRAS1-related extracellular matrix protein 1 protein-coding 625965870 Efcab7 EF-hand calcium binding domain 7 INVOLVED IN positive regulation of protein import into nucleus (ortholog); positive regulation of protein localization to ciliary membrane (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Postaxial Polydactyly (ortholog); FOUND IN ciliary membrane (ortholog); cytoplasmic side of plasma membrane (ortholog); plasma membrane protein complex (ortholog) 1 54651274 54700456 - 22301074 116899845 MODEL JAAIVD010000025;XM_032901781 XP_032757672 EF-hand calcium-binding domain-containing protein 7 protein-coding 625965888 Cd3e CD3e molecule ENCODES a protein that exhibits identical protein binding (ortholog); SH3 domain binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); cerebellum development (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH CD3epsilon deficiency (ortholog); Experimental Diabetes Mellitus (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cell body (ortholog); cell-cell junction (ortholog) 8 39526297 39537391 - 22301074;30032202 116906921 MODEL JAAIVD010000027;XM_032909845 XP_032765736 T-cell surface glycoprotein CD3 epsilon chain protein-coding 625965900 Ddx6 DEAD-box helicase 6 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of neuron differentiation (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH genetic disease (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH IMPAIRED LANGUAGE AND DYSMORPHIC FACIES (ortholog); rheumatoid arthritis (ortholog); FOUND IN adherens junction (ortholog); chromatoid body (ortholog); concave side of sperm head (ortholog) 8 39147035 39180102 + 22301074;30032202 116908131 MODEL JAAIVD010000027;XM_032911417;XM_032911418;XM_032911419;XM_032911420;XM_032911421;XM_032911422 XP_032767308;XP_032767309;XP_032767310;XP_032767311;XP_032767312;XP_032767313 probable ATP-dependent RNA helicase DDX6 protein-coding 625965933 Lrrc34 leucine rich repeat containing 34 INVOLVED IN gene expression (ortholog); telomere maintenance (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Joubert syndrome (ortholog) 3 124854302 124873941 - 22301074 116896975 MODEL JAAIVD010000012;XM_032898556 XP_032754447 leucine-rich repeat-containing protein 34 protein-coding 625965948 LOC116892805 zinc finger CCCH domain-containing protein 14-like 2 186901448 186903588 - 22301074;30032202 116892805 MODEL JAAIVD010000001;XM_032894680 XP_032750571 protein-coding 625965953 LOC116901016 probable rRNA-processing protein EBP2 5 125371056 125371985 - 116901016 MODEL JAAIVD010000023 pseudo 625965954 LOC116887987 high mobility group protein B4-like X 72085781 72086437 + 116887987 MODEL JAAIVD010000014 pseudo 625965955 LOC116888191 uncharacterized LOC116888191 X 121627495 121796787 - 116888191 MODEL JAAIVD010000014 pseudo 625965956 LOC116887811 FYVE, RhoGEF and PH domain-containing protein 1-like X 30139468 30154334 - 116887811 MODEL JAAIVD010000014 pseudo 625965957 LOC116913040 U6 spliceosomal RNA 11 10153153 10153259 + 116913040 MODEL JAAIVD010000006;XR_004389577 snrna 625965960 Dusp12 dual specificity phosphatase 12 ENCODES a protein that exhibits kinase binding (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); positive regulation of glucokinase activity (ortholog); protein dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 50069732 50079765 - 22301074;30032202 116911347 MODEL JAAIVD010000005;XM_032915264;XM_032915265 XP_032771155;XP_032771156 dual specificity protein phosphatase 12 protein-coding 625965972 LOC116895260 late cornified envelope protein 2D-like 3 1434502 1435081 + 22301074 116895260 MODEL JAAIVD010000012;XM_032896578 XP_032752469 protein-coding 625965976 LOC116908052 dihydropteridine reductase-like 8 479222 483075 - 116908052 MODEL JAAIVD010000027;XR_004388869 pseudo 625965979 LOC116890597 small nucleolar RNA SNORA17 1 3360707 3360818 + 116890597 MODEL JAAIVD010000025 pseudo 625965980 LOC116896009 60S ribosomal protein L4-like 3 174457235 174458529 - 116896009 MODEL JAAIVD010000012 pseudo 625965981 LOC116890608 small nucleolar RNA SNORD99 1 25938770 25938843 - 116890608 MODEL JAAIVD010000025;XR_004386759 snorna 625965984 Acvr2a activin A receptor type 2A ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH cocaine dependence (ortholog); colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inhibin-betaglycan-ActRII complex (ortholog) 5 26678656 26760826 + 22301074;30032202 116901389 MODEL JAAIVD010000023;XM_032903259;XM_032903260 XP_032759150;XP_032759151 activin receptor type-2A protein-coding 625966003 Cep104 centrosomal protein 104 ENCODES a protein that exhibits glutamate binding (ortholog); glycine binding (ortholog); thienylcyclohexylpiperidine binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 77 (ortholog); cerebellar ataxia (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) 1 6709622 6742628 - 30032202 116892178 MODEL JAAIVD010000025;XM_032893696 XP_032749587 centrosomal protein of 104 kDa protein-coding 625966029 LOC116889625 hypoxanthine-guanine phosphoribosyltransferase-like Y 1424974 1429985 + 116889625 MODEL JAAIVD010000015 pseudo 625966030 Cplx4 complexin 4 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); FOUND IN synapse (ortholog) 15 65296826 65312240 + 22301074;30032202 116885005 MODEL JAAIVD010000010;XM_032886241 XP_032742132 complexin-4 protein-coding 625966036 Usp25 ubiquitin specific peptidase 25 ENCODES a protein that exhibits ATPase binding (ortholog); cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN immune response (ortholog); interleukin-17-mediated signaling pathway (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Idiopathic Generalized Epilepsy 19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 64933321 65035118 - 22301074;30032202 116899047 MODEL JAAIVD010000003;XM_032900515;XM_032900516 XP_032756406;XP_032756407 ubiquitin carboxyl-terminal hydrolase 25 protein-coding 625966067 Ca1 carbonic anhydrase 1 ENCODES a protein that exhibits arylesterase activity (ortholog); carbonate dehydratase activity (ortholog); cyanamide hydratase activity (ortholog); INVOLVED IN response to fructose (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Chronic Pancreatitis (ortholog); colitis (ortholog) 3 157479415 157489891 + 22301074;30032202 116897081 MODEL JAAIVD010000012;XM_032898704 XP_032754595 protein-coding 625966078 Jmjd6 jumonji domain containing 6, arginine demethylase and lysine hydroxylase ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3R2 demethylase activity (ortholog); histone H4R3 demethylase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel development (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); melanoma (ortholog); Mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 9 67236380 67242405 + 30032202 116910054 MODEL JAAIVD010000002;XM_032913855;XM_032913856;XR_004389125 XP_032769746;XP_032769747 bifunctional arginine demethylase and lysyl-hydroxylase JMJD6 protein-coding 625966093 Edem1 ER degradation enhancing alpha-mannosidase like protein 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); misfolded protein binding (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); obsolete mannoprotein catabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Zika fever (ortholog); FOUND IN aggresome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 37934495 37966920 - 22301074;30032202 116903437 MODEL JAAIVD010000024;XM_032905990 XP_032761881 ER degradation-enhancing alpha-mannosidase-like protein 1 protein-coding 625966109 Gramd2b GRAM domain containing 2B ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 15 75326015 75424367 - 116884301 MODEL JAAIVD010000010;XM_032885401;XM_032885402 XP_032741292;XP_032741293 GRAM domain-containing protein 2B protein-coding 625966130 Rab9b RAB9B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); identical protein binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); FOUND IN phagocytic vesicle (ortholog) X 88620334 88627887 - 22301074;30032202 116888813 MODEL JAAIVD010000014;XM_032890092 XP_032745983 ras-related protein Rab-9B protein-coding 625966137 Pcgf1 polycomb group ring finger 1 INVOLVED IN chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 6 63143657 63146331 - 30032202 116903630 MODEL JAAIVD010000024;XM_032906289 XP_032762180 polycomb group RING finger protein 1 protein-coding 625966150 Majin membrane anchored junction protein INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic attachment of telomere to nuclear envelope (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 2 1465250 1500759 - 22301074;30032202 116893594 MODEL JAAIVD010000001;XM_032895293;XM_032895294 XP_032751184;XP_032751185 membrane-anchored junction protein protein-coding 625966168 LOC116900497 olfactory receptor 4A5-like 5 71916161 71917105 - 22301074 116900497 MODEL JAAIVD010000023;XM_032902232 XP_032758123 protein-coding 625966171 LOC116895705 splicing factor 1-like 1 26333252 26335081 + 116895705 MODEL JAAIVD010000025;XM_032896899 XP_032752790 protein-coding 625966177 LOC116893575 60S ribosomal protein L13a-like 2 223162585 223163176 + 116893575 MODEL JAAIVD010000001 pseudo 625966178 LOC116910779 U6 spliceosomal RNA 9 95554600 95554702 - 116910779 MODEL JAAIVD010000002;XR_004389285 snrna 625966181 LOC116913801 granzyme B-like 12 68780021 68783081 - 116913801 MODEL JAAIVD010000007 pseudo 625966182 LOC116900326 olfactory receptor 10AG1-like 5 64469178 64470132 + 116900326 MODEL JAAIVD010000023 pseudo 625966183 LOC116886167 gamma-aminobutyric acid receptor-associated protein-like 2 17 31633979 31643263 + 30032202 116886167 MODEL JAAIVD010000011;XM_032887539 XP_032743430 protein-coding 625966189 Dut deoxyuridine triphosphatase ENCODES a protein that exhibits dUTP diphosphatase activity (ortholog); identical protein binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); dUMP biosynthetic process (ortholog); dUTP catabolic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Bone Marrow Failure and Diabetes Mellitus Syndrome (ortholog); Brain Neoplasms (ortholog); High Myopia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 103575331 103586962 + 22301074;30032202 116901902 MODEL JAAIVD010000023;XM_032904115;XM_032904116 XP_032760006;XP_032760007 deoxyuridine 5'-triphosphate nucleotidohydrolase, mitochondrial protein-coding 625966204 Hltf helicase like transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA translocase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); FOUND IN nuclear replication fork (ortholog); nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 134009970 134070919 - 22301074 116897000 MODEL JAAIVD010000012;XM_032898605 XP_032754496 helicase-like transcription factor protein-coding 625966233 LOC116888445 charged multivesicular body protein 1b-2 X 61155866 61195637 + 30032202 116888445 MODEL JAAIVD010000014;XM_032889720 XP_032745611 protein-coding 625966243 Nsl1 NSL1 component of MIS12 kinetochore complex FOUND IN kinetochore (ortholog); MIS12/MIND type complex (ortholog); nuclear speck (ortholog) 10 69148807 69172415 + 22301074;30032202 116911240 MODEL JAAIVD010000005;XM_032915141;XM_032915142;XM_032915143 XP_032771032;XP_032771033;XP_032771034 kinetochore-associated protein NSL1 homolog protein-coding 625966264 LOC116893201 olfactory receptor 10A3-like 2 106718491 106719460 + 116893201 MODEL JAAIVD010000001 pseudo 625966265 LOC116899082 G1/S-specific cyclin-D3 4 82278650 82284850 - 30032202 116899082 MODEL JAAIVD010000003;XM_032900582 XP_032756473 protein-coding 625966273 Lgi1 leucine rich glioma inactivated 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); neuron projection development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); epilepsy (ortholog); epilepsy with generalized tonic-clonic seizures (ortholog); FOUND IN axon initial segment (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 35451516 35493263 - 22301074;30032202 116891121 MODEL JAAIVD010000001;XM_032891837 XP_032747728 leucine-rich glioma-inactivated protein 1 protein-coding 625966285 LOC116899660 bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial-like 1 52665717 52667014 + 22301074;30032202 116899660 MODEL JAAIVD010000025;XM_032901674 XP_032757565 protein-coding 625966290 Tbc1d10a TBC1 domain family member 10A ENCODES a protein that exhibits GTPase activator activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN positive regulation of proteolysis (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN plasma membrane (ortholog) 11 73167876 73195844 + 116912380 MODEL JAAIVD010000006;XM_032916439 XP_032772330 protein-coding 625966303 LOC116911354 uncharacterized LOC116911354 10 61265104 61267541 + 116911354 MODEL JAAIVD010000005;XR_004389322 ncrna 625966307 LOC116883691 glyceraldehyde-3-phosphate dehydrogenase-like 14 6117778 6118819 - 116883691 MODEL JAAIVD010000009 pseudo 625966308 LOC116899941 U2 spliceosomal RNA 4 86146582 86146747 - 116899941 MODEL JAAIVD010000003 pseudo 625966309 LOC116884073 U1 spliceosomal RNA 14 30899619 30899719 + 116884073 MODEL JAAIVD010000009 pseudo 625966310 LOC116892067 protein kinase C-binding protein NELL1-like 2 149561241 149637396 - 22301074 116892067 MODEL JAAIVD010000001;XM_032893539 XP_032749430 protein-coding 625966322 Skap1 src kinase associated phosphoprotein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein phosphatase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of adaptive immune response (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of cell-cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 57630098 57926683 - 22301074;30032202 116909282 MODEL JAAIVD010000002;XM_032912818 XP_032768709 src kinase-associated phosphoprotein 1 protein-coding 625966339 Abhd16a abhydrolase domain containing 16A, phospholipase ENCODES a protein that exhibits monoacylglycerol lipase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); phospholipase activity (ortholog); INVOLVED IN monoacylglycerol catabolic process (ortholog); phosphatidylserine catabolic process (ortholog); prostaglandin catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 86 (ortholog) 18 7687580 7702464 + 30032202 116887056 MODEL JAAIVD010000013;XM_032888545 XP_032744436 phosphatidylserine lipase ABHD16A protein-coding 625966363 LOC116904748 small nucleolar RNA SNORA17 6 39042319 39042433 - 116904748 MODEL JAAIVD010000024 pseudo 625966364 LOC116898324 transmembrane protein 45A-like 4 41131699 41145216 - 116898324 MODEL JAAIVD010000003;XM_032899658 XP_032755549 protein-coding 625966373 LOC116891593 uncharacterized LOC116891593 2 81808266 81810912 - 116891593 MODEL JAAIVD010000001;XR_004386849 ncrna 625966378 LOC116904747 small nucleolar RNA SNORA17 6 148219171 148219279 + 116904747 MODEL JAAIVD010000024 pseudo 625966379 Wdr26 WD repeat domain 26 ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 59529940 59571874 - 22301074;30032202 116911729 MODEL JAAIVD010000005;XM_032915707;XM_032915708;XM_032915709;XM_032915710 XP_032771598;XP_032771599;XP_032771600;XP_032771601 WD repeat-containing protein 26 protein-coding 625966407 LOC116908402 small nucleolar RNA SNORA17 8 29541981 29542112 + 116908402 MODEL JAAIVD010000027;XR_004388946 snorna 625966410 Aip AHR interacting HSP90 co-chaperone ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); enzyme binding (ortholog); GAF domain binding (ortholog); INVOLVED IN protein kinase A signaling (ortholog); protein maturation (ortholog); protein targeting to mitochondrion (ortholog); ASSOCIATED WITH ACTH-secreting pituitary adenoma (ortholog); adenoma (ortholog); Familial Isolated Pituitary Adenoma (ortholog); FOUND IN aryl hydrocarbon receptor complex (ortholog); cytosol (ortholog); membrane (ortholog) 2 3516520 3527578 + 22301074 116890789 MODEL JAAIVD010000001;XM_032891262;XM_032891263 XP_032747153;XP_032747154 AH receptor-interacting protein;aryl hydrocarbon receptor interacting protein protein-coding 625966424 Has2 hyaluronan synthase 2 ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); bone morphogenesis (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); diabetes insipidus (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endoplasmic reticulum membrane (ortholog) 1 231705602 231731410 + 30032202 116890097 MODEL JAAIVD010000025;XM_032890846 XP_032746737 protein-coding 625966432 LOC116913859 non-histone chromosomal protein HMG-17-like 12 57461654 57461904 - 116913859 MODEL JAAIVD010000007 pseudo 625966433 Azgp1 alpha-2-glycoprotein 1, zinc-binding INVOLVED IN cell adhesion (ortholog); cellular response to insulin stimulus (ortholog); cellular response to magnesium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); Cachexia (ortholog); FOUND IN extracellular space (ortholog) 16 15433631 15439786 + 30032202 116885790 MODEL JAAIVD010000004;XM_032887122 XP_032743013 zinc-alpha-2-glycoprotein protein-coding 625966441 Abcc6 ATP binding cassette subfamily C member 6 ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN ATP metabolic process (ortholog); ATP transport (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN multidrug resistance-associated protein mediated transport pathway; ASSOCIATED WITH Animal Disease Models (ortholog); arterial calcification of infancy (ortholog); beta thalassemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 153492676 153545901 + 22301074;30032202 116892114 MODEL JAAIVD010000001;XM_032893592 XP_032749483 multidrug resistance-associated protein 6 protein-coding 625966476 Slc25a30 solute carrier family 25 member 30 ENCODES a protein that exhibits solute:inorganic anion antiporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog) 12 48625102 48646938 + 22301074 116913572 MODEL JAAIVD010000007;XM_032917791 XP_032773682 kidney mitochondrial carrier protein 1 protein-coding 625966490 Pcif1 phosphorylated CTD interacting factor 1 ENCODES a protein that exhibits mRNA (2'-O-methyladenosine-N6-)-methyltransferase activity (ortholog); RNA polymerase II C-terminal domain binding (ortholog); RNA polymerase II C-terminal domain phosphoserine binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of translation (ortholog); positive regulation of translation (ortholog); FOUND IN intercellular bridge (ortholog); microtubule cytoskeleton (ortholog); nucleoplasm (ortholog) 5 153068216 153080935 - 30032202 116902342 MODEL JAAIVD010000023;XM_032904823;XM_032904824 XP_032760714;XP_032760715 PDX1 C-terminal inhibiting factor 1;mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase protein-coding 625966514 LOC116892821 E3 ubiquitin-protein ligase parkin 2 190386386 190802056 + 22301074;30032202 116892821 MODEL JAAIVD010000001;XM_032894706 XP_032750597 protein-coding 625966524 LOC116904739 small nucleolar RNA SNORA17 6 146906078 146906195 + 116904739 MODEL JAAIVD010000024 pseudo 625966525 LOC116905601 spermatogenesis-associated serine-rich protein 2-like 7 10951482 11009310 - 116905601 MODEL JAAIVD010000026 pseudo 625966526 LOC116887720 5S ribosomal RNA 18 16685560 16685662 + 116887720 MODEL JAAIVD010000013 pseudo 625966527 Ilf3 interleukin enhancer binding factor 3 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of translation (ortholog); negative regulation of viral genome replication (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 8 17639954 17678174 + 22301074;30032202 116906600 MODEL JAAIVD010000027;XM_032909343;XM_032909344;XM_032909345;XM_032909346;XM_032909347;XM_032909348;XM_032909349;XM_032909350 XP_032765234;XP_032765235;XP_032765236;XP_032765237;XP_032765238;XP_032765239;XP_032765240;XP_032765241 interleukin enhancer-binding factor 3 protein-coding 625966569 Zc3h12d zinc finger CCCH-type containing 12D INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); mRNA catabolic process (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 2 229172853 229206178 - 22301074;30032202 116893034 MODEL JAAIVD010000001;XM_032894998 XP_032750889 probable ribonuclease ZC3H12D protein-coding 625966579 LOC116908193 peptidyl-prolyl cis-trans isomerase A-like 8 57406626 57407345 + 116908193 MODEL JAAIVD010000027 pseudo 625966580 Ahnak2 AHNAK nucleoprotein 2 ASSOCIATED WITH cerebellar ataxia (ortholog); FOUND IN costamere (ortholog); cytoplasmic vesicle membrane (ortholog); cytosol (ortholog) 7 130361508 130400169 - 22301074;30032202 116906276 MODEL JAAIVD010000026;XM_032909162 XP_032765053 protein AHNAK2 protein-coding 625966595 Mrps30 mitochondrial ribosomal protein S30 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 178302546 178309539 + 22301074;30032202 116897173 MODEL JAAIVD010000012;XM_032898858 XP_032754749 39S ribosomal protein S30, mitochondrial protein-coding 625966604 Camlg calcium modulating ligand ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIz (ortholog); myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 14 73941241 73952038 + 30032202 116883643 MODEL JAAIVD010000009;XM_032884832;XM_032884833 XP_032740723;XP_032740724 calcium signal-modulating cyclophilin ligand protein-coding 625966615 LOC116914147 small nucleolar RNA SNORA17 12 1060185 1060281 - 116914147 MODEL JAAIVD010000007 pseudo 625966616 LOC116909723 signal transducer and activator of transcription 5A 9 60151564 60175549 + 30032202 116909723 MODEL JAAIVD010000002;XM_032913399 XP_032769290 protein-coding 625966639 Efcab8 EF-hand calcium binding domain 8 5 133102303 133174552 + 22301074 116902152 MODEL JAAIVD010000023;XM_032904486 XP_032760377 EF-hand calcium-binding domain-containing protein 8 protein-coding 625966670 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 9088961 9089053 - 116906530 MODEL JAAIVD010000026 trna 625966671 Asap2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 7 37650805 37811617 + 22301074;30032202 116906035 MODEL JAAIVD010000026;XM_032909094 XP_032764985 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2 protein-coding 625966704 LOC116907392 uncharacterized LOC116907392 8 54017077 54020674 - 116907392 MODEL JAAIVD010000027;XR_004388824 ncrna 625966709 LOC116890587 small nucleolar RNA SNORA17 1 81434747 81434872 + 116890587 MODEL JAAIVD010000025;XR_004386747 snorna 625966712 LOC116894616 vomeronasal type-2 receptor 116-like 2 185732882 185747317 - 22301074;30032202 116894616 MODEL JAAIVD010000001;XM_032896330 XP_032752221 protein-coding 625966720 Sema6c semaphorin 6C ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); negative regulation of axon extension (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog) 3 62077596 62090961 - 30032202 116896563 MODEL JAAIVD010000012;XM_032897760;XM_032897761;XM_032897762;XM_032897763;XM_032897764;XM_032897765;XM_032897766;XM_032897767;XM_032897768;XM_032897769 XP_032753651;XP_032753652;XP_032753653;XP_032753654;XP_032753655;XP_032753656;XP_032753657;XP_032753658;XP_032753659;XP_032753660 semaphorin-6C protein-coding 625966762 Wnt8b Wnt family member 8B ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog) 2 44000777 44020136 + 22301074;30032202 116893803 MODEL JAAIVD010000001;XM_032895506 XP_032751397 protein Wnt-8b protein-coding 625966771 LOC116908237 extensin-like 8 84160988 84163377 + 116908237 MODEL JAAIVD010000027;XM_032911499 XP_032767390 protein-coding 625966775 LOC116884118 U6 spliceosomal RNA 14 17563028 17563131 - 116884118 MODEL JAAIVD010000009;XR_004385849 snrna 625966778 LOC116903131 olfactory receptor 6C2-like 6 7826374 7827311 + 22301074;30032202 116903131 MODEL JAAIVD010000024;XM_032905487 XP_032761378 protein-coding 625966781 Actn1 actinin alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal regulatory protein binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); actin filament network formation (ortholog); actin filament organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); brush border (ortholog); cell junction (ortholog) 7 94253955 94348380 - 22301074;30032202 116905211 MODEL JAAIVD010000026;XM_032908024;XM_032908025;XM_032908026 XP_032763915;XP_032763916;XP_032763917 alpha-actinin-1 protein-coding 625966811 Mettl23 methyltransferase 23, arginine ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone H3R17 methyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); epigenetic programing of male pronucleus (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 44 (ortholog); genetic disease (ortholog); glaucoma (ortholog); FOUND IN cytoplasm (ortholog); female pronucleus (ortholog); male pronucleus (ortholog) 9 67231548 67236486 - 30032202 116910055 MODEL JAAIVD010000002;XM_032913857;XM_032913858 XP_032769748;XP_032769749 methyltransferase like 23;methyltransferase-like protein 23 protein-coding 625966823 Smim20 small integral membrane protein 20 INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 52860075 52871507 - 22301074;30032202 116912503 MODEL JAAIVD010000006;XM_032916590 XP_032772481 protein-coding 625966830 Ctif cap binding complex dependent translation initiation factor INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of translational initiation (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 15 56262902 56532088 + 22301074;30032202 116884873 MODEL JAAIVD010000010;XM_032886116;XM_032886117;XM_032886118;XM_032886119;XM_032886120 XP_032742007;XP_032742008;XP_032742009;XP_032742010;XP_032742011 CBP80/20-dependent translation initiation factor protein-coding 625966855 Plk2 polo like kinase 2 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); ATPase binding (ortholog); clathrin heavy chain binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); long-term synaptic depression (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); chromatin (ortholog) 3 186628043 186633827 - 22301074;30032202 116897201 MODEL JAAIVD010000012;XM_032898905 XP_032754796 serine/threonine-protein kinase PLK2 protein-coding 625966873 Ripor2 RHO family interacting cell polarization regulator 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cellular response to chemokine (ortholog); cellular response to mechanical stimulus (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 21 (ortholog); autosomal recessive nonsyndromic deafness 104 (ortholog); nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 14 43700304 43789743 + 116884064 MODEL JAAIVD010000009;XM_032885309;XM_032885310;XM_032885312;XM_032885313;XM_032885314 XP_032741200;XP_032741201;XP_032741203;XP_032741204;XP_032741205 rho family-interacting cell polarization regulator 2 protein-coding 625966909 Hnrnpk heterogeneous nuclear ribonucleoprotein K ENCODES a protein that exhibits actinin binding (ortholog); ATPase binding (ortholog); C-rich single-stranded DNA binding (ortholog); INVOLVED IN acute-phase response (ortholog); camera-type eye development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Au-Kline Syndrome (ortholog); brain disease (ortholog); FOUND IN axon terminus (ortholog); catalytic step 2 spliceosome (ortholog); cell cortex (ortholog) 14 79732082 79744239 + 30032202 116884033 MODEL JAAIVD010000009;XM_032885269;XM_032885270;XM_032885271;XM_032885272;XM_032885273 XP_032741160;XP_032741161;XP_032741162;XP_032741163;XP_032741164 protein-coding 625966940 Clxn calaxin INVOLVED IN regulation of cilium movement (ortholog); regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 53 (ortholog); FOUND IN cilium (ortholog); sperm flagellum (ortholog) 4 312870 327551 + 22301074;30032202 116898602 MODEL JAAIVD010000003;XM_032899796;XM_032899797 XP_032755687;XP_032755688 Efcab1 EF-hand calcium binding domain 1;EF-hand calcium-binding domain-containing protein 1 protein-coding 625966953 Angpt2 angiopoietin 2 ENCODES a protein that exhibits receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ regeneration (ortholog); blood vessel morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Alcoholic Liver Diseases (ortholog); angiosarcoma (ortholog); FOUND IN cell projection (ortholog); extracellular space (ortholog) 13 65450983 65503486 + 30032202 116914450 MODEL JAAIVD010000008;XM_032918751 XP_032774642 angiopoietin-2 protein-coding 625966966 Smim23 small integral membrane protein 23 9 5650162 5653548 - 116910590 MODEL JAAIVD010000002;XM_032914513 XP_032770404 protein-coding 625966974 Ammecr1l AMMECR1 like 15 12459567 12483555 - 116884426 MODEL JAAIVD010000010;XM_032885514;XM_032885515 XP_032741405;XP_032741406 AMMECR1-like protein protein-coding 625966989 LOC116897426 U6 spliceosomal RNA 3 220119294 220119366 - 116897426 MODEL JAAIVD010000012 pseudo 625966990 LOC116884020 olfactory receptor 12-like 14 74498384 74499310 + 22301074;30032202 116884020 MODEL JAAIVD010000009;XM_032885258 XP_032741149 protein-coding 625966993 LOC116886549 CKLF-like MARVEL transmembrane domain-containing protein 2A 17 12575339 12582451 - 22301074 116886549 MODEL JAAIVD010000011;XM_032888067;XM_032888068 XP_032743958;XP_032743959 protein-coding 625967006 LOC116897568 small nucleolar RNA SNORA17 3 32339727 32339855 - 116897568 MODEL JAAIVD010000012;XR_004387579 snorna 625967009 LOC116893358 uncharacterized protein C2orf78 homolog 2 160276132 160282465 + 116893358 MODEL JAAIVD010000001;XM_032895163 XP_032751054 protein-coding 625967014 Reln reelin ENCODES a protein that exhibits lipoprotein particle receptor binding (ortholog); receptor ligand activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN associative learning (ortholog); axon guidance (ortholog); brain development (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Ataxia (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 6 151190879 151615949 - 30032202 116904184 MODEL JAAIVD010000024;XM_032907091 XP_032762982 protein-coding 625967083 LOC116888122 ferritin light chain 1-like X 103492287 103492935 - 116888122 MODEL JAAIVD010000014 pseudo 625967084 LOC116903927 uncharacterized LOC116903927 6 100205324 100206566 + 116903927 MODEL JAAIVD010000024;XR_004388312 ncrna 625967088 LOC116910383 schlafen family member 12-like 9 87424249 87428597 - 116910383 MODEL JAAIVD010000002;XM_032914227 XP_032770118 protein-coding 625967093 Iyd iodotyrosine deiodinase ENCODES a protein that exhibits FMN binding (ortholog); iodotyrosine deiodinase activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); tyrosine metabolic process (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); Experimental Liver Cirrhosis (ortholog); thyroid dyshormonogenesis 4 (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 198349945 198365385 + 22301074;30032202 116894641 MODEL JAAIVD010000001;XM_032896354 XP_032752245 iodotyrosine deiodinase 1 protein-coding 625967102 Relb RELB proto-oncogene, NF-kB subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to osmotic stress (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); atopic dermatitis (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) 2 170989336 171016937 + 22301074;30032202 116892506 MODEL JAAIVD010000001;XM_032894253;XM_032894254;XM_032894255;XM_032894257;XM_032894258 XP_032750144;XP_032750145;XP_032750146;XP_032750148;XP_032750149 transcription factor RelB protein-coding 625967125 Adgrl3 adhesion G protein-coupled receptor L3 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion mediator activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); cell-cell junction (ortholog); glutamatergic synapse (ortholog) 11 38073807 38566091 - 22301074;30032202 116912680 MODEL JAAIVD010000006;XM_032916797;XM_032916798;XM_032916799;XM_032916800;XM_032916802;XM_032916803;XM_032916804;XM_032916805;XM_032916806;XM_032916807;XM_032916808;XM_032916809;XM_032916810;XM_032916811;XM_032916813;XM_032916814;XM_032916815;XM_032916816;XM_032916817;XM_032916818 XP_032772688;XP_032772689;XP_032772690;XP_032772691;XP_032772693;XP_032772694;XP_032772695;XP_032772696;XP_032772697;XP_032772698;XP_032772699;XP_032772700;XP_032772701;XP_032772702;XP_032772704;XP_032772705;XP_032772706;XP_032772707;XP_032772708;XP_032772709 protein-coding 625967184 LOC116904339 nucleophosmin-like 6 69918145 69919137 - 116904339 MODEL JAAIVD010000024 pseudo 625967185 LOC116897389 U6 spliceosomal RNA 3 202543708 202543814 - 116897389 MODEL JAAIVD010000012;XR_004387433 snrna 625967188 LOC116887632 zinc finger protein 431-like 18 10865331 10872954 + 22301074;30032202 116887632 MODEL JAAIVD010000013;XM_032889231 XP_032745122 protein-coding 625967196 LOC116903852 zinc finger and SCAN domain-containing protein 2-like 6 92339330 92342895 - 30032202 116903852 MODEL JAAIVD010000024;XM_032906584;XM_032906586;XM_032906587;XM_032906588;XR_004388305 XP_032762475;XP_032762477;XP_032762478;XP_032762479 protein-coding 625967212 Ucp1 uncoupling protein 1 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); long-chain fatty acid binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); brown fat cell differentiation (ortholog); cellular response to cold (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 17 16930174 16937909 - 22301074;30032202 116886329 MODEL JAAIVD010000011;XM_032887778 XP_032743669 mitochondrial brown fat uncoupling protein 1 protein-coding 625967220 LOC116885464 insulin receptor substrate 1-like 16 16380155 16382468 + 30032202 116885464 MODEL JAAIVD010000004;XM_032886746 XP_032742637 protein-coding 625967226 Crygs crystallin gamma S ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); morphogenesis of an epithelium (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 20 multiple types (ortholog); genetic disease (ortholog) 4 7490663 7495807 - 30032202 116897807 MODEL JAAIVD010000003;XM_032899221 XP_032755112 gamma-crystallin S protein-coding 625967233 LOC116896302 uncharacterized LOC116896302 3 37554331 37560021 + 116896302 MODEL JAAIVD010000012;XM_032897388;XM_032897389;XM_032897390 XP_032753279;XP_032753280;XP_032753281 uncharacterized protein LOC116896302 protein-coding 625967246 Rab26 RAB26, member RAS oncogene family ENCODES a protein that exhibits GMP binding (ortholog); GTP binding (ortholog); INVOLVED IN exocrine system development (ortholog); Golgi to plasma membrane protein transport (ortholog); regulated exocytosis (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog); secretory granule membrane (ortholog) 9 1812402 1817040 - 22301074;30032202 116909977 MODEL JAAIVD010000002;XM_032913758;XM_032913759;XM_032913760;XM_032913761 XP_032769649;XP_032769650;XP_032769651;XP_032769652 ras-related protein Rab-26 protein-coding 625967264 LOC116885665 sorbitol dehydrogenase-like 1 247646 248509 + 116885665 MODEL JAAIVD010000025 pseudo 625967265 Gbgt1 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 (FORS blood group) ENCODES a protein that exhibits globoside alpha-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN globoside metabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 8174330 8182433 - 22301074;30032202 116900005 MODEL JAAIVD010000023;XM_032901810 XP_032757701 globoside alpha-1,3-N-acetylgalactosaminyltransferase 1 protein-coding 625967271 LOC116893681 olfactory receptor 1440 2 12408540 12409606 + 22301074;30032202 116893681 MODEL JAAIVD010000001;XM_032895398 XP_032751289 protein-coding 625967275 LOC116884851 uncharacterized LOC116884851 1 271629625 271632683 + 116884851 MODEL JAAIVD010000025;XR_004385904 ncrna 625967280 Tgif1 TGFB induced factor homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); disorder of sexual development (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 180314261 180321724 - 30032202 116899710 MODEL JAAIVD010000003;XM_032901746 XP_032757637 homeobox protein TGIF1 protein-coding 625967287 Hoxa11 homeobox A11 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH Congenital Limb Deformities (ortholog); Contracture (ortholog); Endometrial Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 6 88816578 88820420 + 22301074;30032202 116903798 MODEL JAAIVD010000024;XM_032906490 XP_032762381 homeobox protein Hox-A11 protein-coding 625967293 LOC116894144 olfactory receptor 52K1-like 2 104110604 104111554 - 22301074 116894144 MODEL JAAIVD010000001;XM_032895861 XP_032751752 protein-coding 625967296 Tnk1 tyrosine kinase non receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of Ras protein signal transduction (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 54 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 9 49457762 49463882 - 22301074;30032202 116909398 MODEL JAAIVD010000002;XM_032912961;XM_032912962;XM_032912963 XP_032768852;XP_032768853;XP_032768854 non-receptor tyrosine-protein kinase TNK1 protein-coding 625967317 Ddx55 DEAD-box helicase 55 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); large ribosomal subunit rRNA binding (ortholog); INVOLVED IN maturation of LSU-rRNA (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 16 29304734 29320328 - 22301074;30032202 116885395 MODEL JAAIVD010000004;XM_032886675 XP_032742566 ATP-dependent RNA helicase DDX55 protein-coding 625967335 Rmnd5a required for meiotic nuclear division 5 homolog A FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 74393421 74451350 - 22301074;30032202 116903684 MODEL JAAIVD010000024;XM_032906346;XM_032906347 XP_032762237;XP_032762238 E3 ubiquitin-protein transferase RMND5A protein-coding 625967351 LOC116912906 40S ribosomal protein S29-like 11 67371043 67371195 + 116912906 MODEL JAAIVD010000006 pseudo 625967352 Tango6 transport and golgi organization 6 homolog ASSOCIATED WITH myoepithelioma (ortholog) 17 26400480 26580789 + 30032202 116886345 MODEL JAAIVD010000011;XM_032887797 XP_032743688 transport and Golgi organization protein 6 homolog protein-coding 625967374 Wipf3 WAS/WASL interacting protein family member 3 ENCODES a protein that exhibits SH3 domain binding (ortholog); FOUND IN synapse (ortholog) 6 86577686 86628011 - 22301074;30032202 116903773 MODEL JAAIVD010000024;XM_032906463 XP_032762354 WAS/WASL-interacting protein family member 3 protein-coding 625967386 LOC116891127 uncharacterized LOC116891127 2 35736299 35743067 - 116891127 MODEL JAAIVD010000001;XR_004386818 ncrna 625967390 Idh3g isocitrate dehydrogenase (NAD(+)) 3 non-catalytic subunit gamma ENCODES a protein that exhibits enzyme activator activity (ortholog); isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN isocitrate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Emery-Dreifuss muscular dystrophy (ortholog); retinitis pigmentosa 99 (ortholog); spastic quadriplegic cerebral palsy (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrion (ortholog); nucleolus (ortholog) X 128794347 128803098 + 22301074;30032202 116889118 MODEL JAAIVD010000014;XM_032890286;XM_032890287;XM_032890288;XM_032890289;XM_032890290 XP_032746177;XP_032746178;XP_032746179;XP_032746180;XP_032746181 isocitrate dehydrogenase [NAD] subunit gamma, mitochondrial protein-coding 625967419 LOC116890506 U1 spliceosomal RNA 1 9798516 9798673 - 116890506 MODEL JAAIVD010000025;XR_004386691 snrna 625967422 LOC116890070 vomeronasal type-1 receptor 4-like 1 214917285 214918261 - 22301074;30032202 116890070 MODEL JAAIVD010000025;XM_032890832 XP_032746723 protein-coding 625967425 LOC116883404 40S ribosomal protein S6-like 14 34266649 34267470 + 22301074;30032202 116883404 MODEL JAAIVD010000009;XM_032884527 XP_032740418 protein-coding 625967430 Slmap sarcolemma associated protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of hippo signaling (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); cardiac arrest (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); FAR/SIN/STRIPAK complex (ortholog); membrane (ortholog) 13 2218610 2333295 - 22301074;30032202 116914625 MODEL JAAIVD010000008;XM_032918989;XM_032918990;XM_032918991;XM_032918992;XM_032918993;XM_032918994;XM_032918995;XM_032918996;XM_032918997;XM_032918998;XM_032918999;XM_032919000;XM_032919001;XM_032919002;XM_032919003;XM_032919005;XM_032919006;XM_032919007;XM_032919008;XM_032919009;XM_032919010;XM_032919011;XM_032919012;XM_032919013;XM_032919014 XP_032774880;XP_032774881;XP_032774882;XP_032774883;XP_032774884;XP_032774885;XP_032774886;XP_032774887;XP_032774888;XP_032774889;XP_032774890;XP_032774891;XP_032774892;XP_032774893;XP_032774894;XP_032774896;XP_032774897;XP_032774898;XP_032774899;XP_032774900;XP_032774901;XP_032774902;XP_032774903;XP_032774904;XP_032774905 sarcolemmal membrane-associated protein protein-coding 625967491 Mri1 methylthioribose-1-phosphate isomerase 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH neurodegenerative disease (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 17 16035337 16041222 + 30032202 116886476 MODEL JAAIVD010000011;XM_032887980 XP_032743871 methylthioribose-1-phosphate isomerase protein-coding 625967500 LOC116897437 U1 spliceosomal RNA 3 63679845 63680010 + 116897437 MODEL JAAIVD010000012;XR_004387476 snrna 625967503 Ttc23l tetratricopeptide repeat domain 23 like 3 170168027 170231457 + 22301074 116896001 MODEL JAAIVD010000012;XM_032897026 XP_032752917 tetratricopeptide repeat protein 23-like protein-coding 625967518 LOC116889743 60S ribosomal protein L17-like 116889743 MODEL JAAIVD010000075 pseudo 625967519 Dppa3 developmental pluripotency associated 3 ENCODES a protein that exhibits histone H3K9me2/3 reader activity (ortholog); INVOLVED IN embryonic cleavage (ortholog); epigenetic programing of female pronucleus (ortholog); ASSOCIATED WITH Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); female pronucleus (ortholog) 6 24470567 24473996 - 30032202 116904601 MODEL JAAIVD010000024;XM_032907398 XP_032763289 developmental pluripotency-associated protein 3 protein-coding 625967527 LOC116902645 U2 spliceosomal RNA 5 20399978 20400152 + 116902645 MODEL JAAIVD010000023 pseudo 625967528 C11H22orf31 chromosome 11 C22orf31 homolog 11 74227081 74241112 + 116912023 MODEL JAAIVD010000006;XM_032915910 XP_032771801 uncharacterized protein C22orf31 homolog protein-coding 625967534 Znf106 zinc finger protein 106 ENCODES a protein that exhibits opioid peptide activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 5 98644274 98694852 - 30032202 116901838 MODEL JAAIVD010000023;XM_032904014 XP_032759905 protein-coding 625967560 LOC116910030 40S ribosomal protein S19 9 9401927 9402428 - 22301074;30032202 116910030 MODEL JAAIVD010000002;XM_032913815;XM_032913816 XP_032769706;XP_032769707 protein-coding 625967568 Cbfa2t3 CBFA2/RUNX1 partner transcriptional co-repressor 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog) 17 42257486 42326500 - 22301074;30032202 116886155 MODEL JAAIVD010000011;XM_032887518;XM_032887520;XM_032887521;XM_032887522 XP_032743409;XP_032743411;XP_032743412;XP_032743413 protein CBFA2T3 protein-coding 625967593 Tmem87a transmembrane protein 87A ENCODES a protein that exhibits mechanosensitive potassium channel activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); detection of mechanical stimulus involved in sensory perception of touch (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog); plasma membrane (ortholog) 5 98491947 98536972 - 30032202 116901833 MODEL JAAIVD010000023;XM_032903999;XM_032904001;XM_032904002;XM_032904003;XM_032904004 XP_032759890;XP_032759892;XP_032759893;XP_032759894;XP_032759895 protein-coding 625967625 LOC116910000 uncharacterized LOC116910000 9 14433451 14444135 + 116910000 MODEL JAAIVD010000002;XR_004389121 ncrna 625967629 Suv39h1 SUV39H1 histone lysine methyltransferase ENCODES a protein that exhibits histone H3K9 methyltransferase activity (ortholog); histone H3K9 trimethyltransferase activity (ortholog); histone H3K9me2 methyltransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH Chromosome Breakage (ortholog); Ependymomas (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN chromatin silencing complex (ortholog); eNoSc complex (ortholog); heterochromatin (ortholog) X 15465315 15478406 - 22301074;30032202 116888696 MODEL JAAIVD010000014;XM_032889986 XP_032745877 histone-lysine N-methyltransferase SUV39H1;suppressor of variegation 3-9 homolog 1 protein-coding 625967639 Vps26c VPS26 endosomal protein sorting factor C INVOLVED IN endocytic recycling (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) 4 50120263 50147850 + 22301074;30032202 116898962 MODEL JAAIVD010000003;XM_032900383;XM_032900384 XP_032756274;XP_032756275 vacuolar protein sorting-associated protein 26C protein-coding 625967652 LOC116889369 protein LSM12 homolog X 89349350 89349941 + 116889369 MODEL JAAIVD010000014 pseudo 625967653 Gli3 GLI family zinc finger 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anterior semicircular canal development (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); anodontia (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 14 33949662 34039568 - 30032202 116883175 MODEL JAAIVD010000009;XM_032884213 XP_032740104 transcriptional activator GLI3 protein-coding 625967667 Them6 thioesterase superfamily member 6 1 247463993 247467278 + 116912523 MODEL JAAIVD010000025;XM_032916617 XP_032772508 protein THEM6 protein-coding 625967673 Arhgap10 Rho GTPase activating protein 10 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog) 17 24473531 24726381 - 22301074;30032202 116886148 MODEL JAAIVD010000011;XM_032887503;XM_032887504;XM_032887505;XM_032887506 XP_032743394;XP_032743395;XP_032743396;XP_032743397 rho GTPase-activating protein 10 protein-coding 625967708 LOC116907441 olfactory receptor 143-like 8 32109372 32110335 + 22301074;30032202 116907441 MODEL JAAIVD010000027;XM_032910412 XP_032766303 protein-coding 625967711 Cpd carboxypeptidase D ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to interleukin-2 (ortholog); FOUND IN nucleus (ortholog); perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) 9 95469464 95534631 - 22301074 116910422 MODEL JAAIVD010000002;XM_032914267 XP_032770158 protein-coding 625967736 C17H16orf87 chromosome 17 C16orf87 homolog 17 14327389 14354819 + 116886311 MODEL JAAIVD010000011;XM_032887753 XP_032743644 UPF0547 protein C16orf87 homolog protein-coding 625967744 LOC116907391 urinary protein 3-like 8 54125754 54127276 - 30032202 116907391 MODEL JAAIVD010000027;XM_032910344 XP_032766235 protein-coding 625967749 Capn7 calpain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); MIT domain binding (ortholog); INVOLVED IN positive regulation of epithelial cell migration (ortholog); proteolysis (ortholog); self proteolysis (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog) 13 7056040 7090909 + 22301074 116914419 MODEL JAAIVD010000008;XM_032918686;XM_032918687;XM_032918688 XP_032774577;XP_032774578;XP_032774579 calpain-7 protein-coding 625967780 Inpp5k inositol polyphosphate-5-phosphatase K ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); inositol trisphosphate phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH congenital muscular dystrophy with cataracts and intellectual disability (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 9 94343393 94363014 + 22301074;30032202 116910172 MODEL JAAIVD010000002;XM_032914029;XM_032914031;XM_032914032 XP_032769920;XP_032769922;XP_032769923 inositol polyphosphate 5-phosphatase K protein-coding 625967802 LOC116888656 gamma-aminobutyric acid receptor-associated protein-like 2 X 1277891 1278623 - 30032202 116888656 MODEL JAAIVD010000014;XM_032889950 XP_032745841 protein-coding 625967807 LOC116895749 endogenous retrovirus group K member 7 Pro protein-like 3 35845450 35845998 + 22301074 116895749 MODEL JAAIVD010000012;XM_032896918 XP_032752809 protein-coding 625967810 Npffr2 neuropeptide FF receptor 2 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); FOUND IN actin cytoskeleton (ortholog); plasma membrane (ortholog) 11 3015450 3024072 + 22301074;30032202 116912859 MODEL JAAIVD010000006;XM_032917072 XP_032772963 protein-coding 625967815 Alkbh3 alkB homolog 3, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA alkylation repair (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 5 68142437 68171325 - 30032202 116901657 MODEL JAAIVD010000023;XM_032903767;XM_032903768 XP_032759658;XP_032759659 alkB homolog 3, alpha-ketoglutaratedependent dioxygenase;alpha-ketoglutarate-dependent dioxygenase alkB homolog 3 protein-coding 625967833 Rab2a RAB2A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN autophagosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 1 134915485 134979612 - 22301074;30032202 116903534 MODEL JAAIVD010000025;XM_032906149 XP_032762040 ras-related protein Rab-2A protein-coding 625967845 Hpgd 15-hydroxyprostaglandin dehydrogenase ENCODES a protein that exhibits 15-hydroxyprostaglandin dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD binding (ortholog); INVOLVED IN ductus arteriosus closure (ortholog); female pregnancy (ortholog); kidney development (ortholog); ASSOCIATED WITH carcinoma (ortholog); colon carcinoma (ortholog); Fever (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); extracellular space (ortholog) 13 32775011 32806372 + 30032202 116914399 MODEL JAAIVD010000008;XM_032918627 XP_032774518 15-hydroxyprostaglandin dehydrogenase [NAD(+)] protein-coding 625967856 LOC116884091 small nucleolar RNA SNORA17 14 25554869 25554995 + 116884091 MODEL JAAIVD010000009;XR_004385830 snorna 625967859 Cngb3 cyclic nucleotide gated channel subunit beta 3 ENCODES a protein that exhibits cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); intracellularly cGMP-activated cation channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 3 (ortholog); FOUND IN photoreceptor outer segment (ortholog); plasma membrane (ortholog); transmembrane transporter complex (ortholog) 1 124208020 124399217 - 30032202 116889215 MODEL JAAIVD010000025;XM_032890369 XP_032746260 cyclic nucleotide-gated cation channel beta-3 protein-coding 625967880 LOC116887339 60S ribosomal protein L39-like 18 26853169 26853516 + 22301074;30032202 116887339 MODEL JAAIVD010000013;XM_032888932 XP_032744823 protein-coding 625967885 Syf2 SYF2 pre-mRNA splicing factor INVOLVED IN embryonic organ development (ortholog); gastrulation (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH encephalitis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 23305210 23313330 - 30032202 116894583 MODEL JAAIVD010000025;XM_032896305 XP_032752196 pre-mRNA-splicing factor SYF2 protein-coding 625967896 LOC116900581 transcription initiation factor IIA subunit 2-like 1 70195839 70196304 - 116900581 MODEL JAAIVD010000025 pseudo 625967897 LOC116885156 small nuclear ribonucleoprotein Sm D1-like 16 16473856 16474217 + 116885156 MODEL JAAIVD010000004 pseudo 625967898 Nrxn2 neurexin 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cell adhesion molecule binding (ortholog); neuroligin family protein binding (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); protein-containing complex (ortholog) 2 1149183 1264330 - 116890655 MODEL JAAIVD010000001;XM_032891021;XM_032891022;XM_032891023;XM_032891024;XM_032891025;XM_032891026;XM_032891027;XM_032891028;XM_032891030;XM_032891031;XM_032891032;XM_032891033;XM_032891034;XM_032891035;XM_032891036;XM_032891037 XP_032746912;XP_032746913;XP_032746914;XP_032746915;XP_032746916;XP_032746917;XP_032746918;XP_032746919;XP_032746921;XP_032746922;XP_032746923;XP_032746924;XP_032746925;XP_032746926;XP_032746927;XP_032746928 neurexin-2-beta protein-coding 625967946 LOC116906588 small nuclear ribonucleoprotein Sm D2-like 8 53579744 53580221 - 22301074;30032202 116906588 MODEL JAAIVD010000027;XM_032909327 XP_032765218 protein-coding 625967951 Gtf2h3 general transcription factor IIH subunit 3 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN core TFIIH complex portion of holo TFIIH complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 29279446 29294866 - 22301074;30032202 116885942 MODEL JAAIVD010000004;XM_032887261 XP_032743152 protein-coding 625967968 Pkn2 protein kinase N2 ENCODES a protein that exhibits histone deacetylase binding (ortholog); kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apical junction assembly (ortholog); epithelial cell migration (ortholog); positive regulation of cytokinesis (ortholog); FOUND IN apical junction complex (ortholog); centrosome (ortholog); cleavage furrow (ortholog) 3 17847346 17947076 + 22301074 116896191 MODEL JAAIVD010000012;XM_032897238;XM_032897239 XP_032753129;XP_032753130 serine/threonine-protein kinase N2 protein-coding 625967996 LOC116894073 olfactory receptor 51A4-like 2 103002729 103003622 - 22301074 116894073 MODEL JAAIVD010000001;XM_032895796 XP_032751687 protein-coding 625967999 Chchd6 coiled-coil-helix-coiled-coil-helix domain containing 6 INVOLVED IN cristae formation (ortholog); DNA damage response (ortholog); PARTICIPATES IN mitochondrial protein import pathway; FOUND IN cytosol (ortholog); MICOS complex (ortholog); mitochondrial inner membrane (ortholog) 6 56774905 56992380 + 22301074;30032202 116903513 MODEL JAAIVD010000024;XM_032906118 XP_032762009 MICOS complex subunit MIC25 protein-coding 625968011 Mrps15 mitochondrial ribosomal protein S15 FOUND IN mitochondrial matrix (ortholog); mitochondrial ribosome (ortholog); mitochondrial small ribosomal subunit (ortholog) 1 32242495 32252719 - 22301074 116896751 MODEL JAAIVD010000025;XM_032898197 XP_032754088 28S ribosomal protein S15, mitochondrial protein-coding 625968023 LOC116900652 mRNA turnover protein 4 homolog 5 115174386 115176365 + 116900652 MODEL JAAIVD010000023 pseudo 625968024 Septin6 septin 6 FOUND IN axon terminus (ortholog); cleavage furrow (ortholog); presynapse (ortholog) X 103094245 103170223 - 22301074;30032202 116888234 MODEL JAAIVD010000014;XM_032889520;XM_032889521;XM_032889522;XM_032889523;XM_032889524;XM_032889525 XP_032745411;XP_032745412;XP_032745413;XP_032745414;XP_032745415;XP_032745416 septin-6 protein-coding 625968059 Sgpp2 sphingosine-1-phosphate phosphatase 2 ENCODES a protein that exhibits sphingosine-1-phosphate phosphatase activity (ortholog); INVOLVED IN regulation of type B pancreatic cell proliferation (ortholog); sphingosine metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) 4 151567144 151627575 + 30032202 116899543 MODEL JAAIVD010000003;XM_032901434 XP_032757325 protein-coding 625968067 LOC116896062 protein crumbs homolog 1-like 3 205371439 205372477 - 116896062 MODEL JAAIVD010000012 pseudo 625968068 LOC116904787 small nucleolar RNA U13 6 61231294 61231398 - 116904787 MODEL JAAIVD010000024;XR_004388451 snorna 625968071 Dipk1b divergent protein kinase domain 1B 5 10449929 10457739 - 116901263 MODEL JAAIVD010000023;XM_032903018;XM_032903019 XP_032758909;XP_032758910 protein-coding 625968084 LOC116910855 cyclin-dependent kinases regulatory subunit 1-like 10 88391491 88391728 - 116910855 MODEL JAAIVD010000005 pseudo 625968085 LOC116890140 prostaglandin G/H synthase 2-like 1 25355340 25356838 - 116890140 MODEL JAAIVD010000025 pseudo 625968086 Dmac1 distal membrane arm assembly component 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 78243921 78246524 + 116901059 MODEL JAAIVD010000025;XM_032902636 XP_032758527 distal membrane arm assembly complex 1;distal membrane-arm assembly complex protein 1 protein-coding 625968092 Tet3 tet methylcytosine dioxygenase 3 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); methyl-CpG binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epigenetic programing of male pronucleus (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Beck-Fahrner Syndrome (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); female pronucleus (ortholog); male pronucleus (ortholog) 6 62766910 62859977 + 22301074;30032202 116903608 MODEL JAAIVD010000024;XM_032906253 XP_032762144 methylcytosine dioxygenase TET3 protein-coding 625968108 Parp12 poly(ADP-ribose) polymerase family member 12 ENCODES a protein that exhibits NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); protein auto-ADP-ribosylation (ortholog); transepithelial transport (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Human Influenza (ortholog); macular degeneration (ortholog); FOUND IN trans-Golgi network (ortholog) 6 100665830 100712599 + 22301074 116903937 MODEL JAAIVD010000024;XM_032906714 XP_032762605 protein mono-ADP-ribosyltransferase PARP12 protein-coding 625968124 Prdx6 peroxiredoxin 6 ENCODES a protein that exhibits 1-acylglycerophosphocholine O-acyltransferase activity (ortholog); calcium-independent phospholipase A2 activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN bleb assembly (ortholog); cellular oxidant detoxification (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 10 40540073 40551238 - 22301074;30032202 116911094 MODEL JAAIVD010000005;XM_032914925 XP_032770816 peroxiredoxin-6 protein-coding 625968133 LOC116907307 olfactory receptor 7G2-like 8 75785865 75786803 - 22301074;30032202 116907307 MODEL JAAIVD010000027;XM_032910252 XP_032766143 protein-coding 625968136 Mcm7 minichromosome maintenance complex component 7 ENCODES a protein that exhibits DNA helicase activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH astigmatism (ortholog); hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); FOUND IN CMG complex (ortholog); MCM complex (ortholog); nucleolus (ortholog) 16 15536829 15544601 - 22301074;30032202 116885190 MODEL JAAIVD010000004;XM_032886407;XM_032886408;XM_032886409 XP_032742298;XP_032742299;XP_032742300 DNA replication licensing factor MCM7 protein-coding 625968160 Magee2 MAGE family member E2 INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog) X 15274018 15276119 + 30032202 116889225 MODEL JAAIVD010000014;XM_032890377 XP_032746268 melanoma-associated antigen E2 protein-coding 625968165 Frmd3 FERM domain containing 3 ASSOCIATED WITH Chloracne (ortholog); triple-receptor negative breast cancer (ortholog) 1 79241888 79437050 - 22301074 116895594 MODEL JAAIVD010000025;XM_032896836 XP_032752727 FERM domain-containing protein 3 protein-coding 625968183 Med20 mediator complex subunit 20 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); skeletal muscle cell differentiation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 4 82254641 82267067 - 22301074;30032202 116899080 MODEL JAAIVD010000003;XM_032900581 XP_032756472 mediator of RNA polymerase II transcription subunit 20 protein-coding 625968191 LOC116894995 small nucleolar RNA SNORA32 2 3279724 3279805 - 116894995 MODEL JAAIVD010000001 pseudo 625968192 LOC116897900 60S ribosomal protein L9-like 4 33271944 33272518 + 116897900 MODEL JAAIVD010000003 pseudo 625968193 Rcan3 RCAN family member 3 ENCODES a protein that exhibits phosphatase binding (ortholog); troponin I binding (ortholog) 1 22794579 22803944 + 22301074;30032202 116894540 MODEL JAAIVD010000025;XM_032896249;XM_032896256 XP_032752140;XP_032752147 calcipressin-3 protein-coding 625968204 Cdk14 cyclin dependent kinase 14 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog) 6 137160625 137636402 - 22301074;30032202 116904126 MODEL JAAIVD010000024;XM_032907012;XM_032907013;XM_032907014;XM_032907015 XP_032762903;XP_032762904;XP_032762905;XP_032762906 cyclin-dependent kinase 14 protein-coding 625968234 LOC116912647 ragulator complex protein LAMTOR2-like 11 4934615 4935021 + 116912647 MODEL JAAIVD010000006 pseudo 625968235 Ranbp17 RAN binding protein 17 ASSOCIATED WITH autism spectrum disorder (ortholog); hydrocephalus (ortholog) 9 6039441 6328995 - 22301074;30032202 116910166 MODEL JAAIVD010000002;XM_032914023;XM_032914024;XM_032914025 XP_032769914;XP_032769915;XP_032769916 ran-binding protein 17 protein-coding 625968273 Exosc9 exosome component 9 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); nuclear mRNA surveillance (ortholog); nuclear polyadenylation-dependent rRNA catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); pontocerebellar hypoplasia (ortholog); pontocerebellar hypoplasia type 1B (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) 3 117421555 117432875 - 30032202 116896927 MODEL JAAIVD010000012;XM_032898496 XP_032754387 exosome complex component RRP45 protein-coding 625968289 LOC116908864 uncharacterized LOC116908864 9 63698233 63718058 + 116908864 MODEL JAAIVD010000002;XR_004389034 ncrna 625968294 Sidt2 SID1 transmembrane family member 2 ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); glucose homeostasis (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); plasma membrane (ortholog) 8 40457850 40473733 - 22301074;30032202 116906700 MODEL JAAIVD010000027;XM_032909496;XM_032909497;XM_032909498 XP_032765387;XP_032765388;XP_032765389 protein-coding 625968332 LOC116905547 60S ribosomal protein L23-like 7 8063320 8063731 + 116905547 MODEL JAAIVD010000026 pseudo 625968333 LOC116895183 protein dpy-30 homolog 3 170186857 170188252 + 116895183 MODEL JAAIVD010000012 pseudo 625968334 LOC116894310 alcohol sulfotransferase A 2 144021742 144069136 + 22301074;30032202 116894310 MODEL JAAIVD010000001;XM_032896006;XM_032896007 XP_032751897;XP_032751898 protein-coding 625968348 Ebna1bp2 EBNA1 binding protein 2 FOUND IN chromosome (ortholog); nucleolus (ortholog) 1 38403973 38408567 - 30032202 116897748 MODEL JAAIVD010000025;XM_032899185 XP_032755076 probable rRNA-processing protein EBP2 protein-coding 625968361 Prmt6 protein arginine methyltransferase 6 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 48253439 48258495 + 22301074;30032202 116896345 MODEL JAAIVD010000012;XM_032897448;XR_004387333 XP_032753339 protein arginine N-methyltransferase 6 protein-coding 625968369 Wdr55 WD repeat domain 55 INVOLVED IN rRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 15 7616838 7620360 - 22301074 116884287 MODEL JAAIVD010000010;XM_032885383 XP_032741274 WD repeat-containing protein 55 protein-coding 625968380 Frrs1 ferric chelate reductase 1 ENCODES a protein that exhibits oxidoreductase activity, acting on metal ions (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 3 42829727 42859580 - 30032202 116896323 MODEL JAAIVD010000012;XM_032897418 XP_032753309 ferric-chelate reductase 1 protein-coding 625968399 LOC116893573 histocompatibility antigen 60b-like 2 222133762 222136030 - 30032202 116893573 MODEL JAAIVD010000001;XM_032895280 XP_032751171 protein-coding 625968405 Paip1 poly(A) binding protein interacting protein 1 ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); positive regulation of cytoplasmic translation (ortholog); FOUND IN cytosol (ortholog); mCRD-mediated mRNA stability complex (ortholog) 3 177319670 177346441 - 22301074;30032202 116897170 MODEL JAAIVD010000012;XM_032898847;XM_032898848;XM_032898849;XM_032898850 XP_032754738;XP_032754739;XP_032754740;XP_032754741 polyadenylate-binding protein-interacting protein 1 protein-coding 625968429 LOC116888960 serine/threonine-protein kinase WNK3 X 6441799 6542767 + 22301074;30032202 116888960 MODEL JAAIVD010000014;XM_032890188 XP_032746079 protein-coding 625968448 Cplx3 complexin 3 ENCODES a protein that exhibits neurotransmitter transmembrane transporter activity (ortholog); SNARE binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of neurotransmitter secretion (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); photoreceptor ribbon synapse (ortholog) 8 51491333 51496380 - 22301074;30032202 116908088 MODEL JAAIVD010000027;XM_032911370 XP_032767261 complexin-3 protein-coding 625968455 Sfxn3 sideroflexin 3 ENCODES a protein that exhibits L-serine transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial transmembrane transport (ortholog); one-carbon metabolic process (ortholog); serine import into mitochondrion (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 44553168 44561618 + 22301074;30032202 116891219 MODEL JAAIVD010000001;XM_032892056;XM_032892057;XM_032892058;XM_032892059 XP_032747947;XP_032747948;XP_032747949;XP_032747950 sideroflexin-3 protein-coding 625968479 Prcd photoreceptor disc component ENCODES a protein that exhibits opsin binding (ortholog); ASSOCIATED WITH retinitis pigmentosa 36 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 9 67413976 67417255 - 22301074;30032202 116909468 MODEL JAAIVD010000002;XM_032913056 XP_032768947 photoreceptor disk component PRCD protein-coding 625968485 LOC116906461 small nucleolar RNA SNORA17 7 72871195 72871323 + 116906461 MODEL JAAIVD010000026;XR_004388716 snorna 625968488 LOC116883505 serpin B9-like 14 52147438 52154829 - 22301074;30032202 116883505 MODEL JAAIVD010000009;XM_032884673 XP_032740564 protein-coding 625968496 LOC116891034 keratin-associated protein 5-10-like 2 7329718 7340542 + 116891034 MODEL JAAIVD010000001;XM_032891717 XP_032747608 protein-coding 625968502 LOC116915174 U6 spliceosomal RNA 13 23559760 23559862 + 116915174 MODEL JAAIVD010000008;XR_004389834 snrna 625968505 LOC116890267 40S ribosomal protein S19-like 1 263814394 263816238 - 22301074;30032202 116890267 MODEL JAAIVD010000025;XM_032890988 XP_032746879 protein-coding 625968509 LOC116897593 small nucleolar RNA SNORA17 3 34168900 34169025 + 116897593 MODEL JAAIVD010000012;XR_004387595 snorna 625968512 Elovl4 ELOVL fatty acid elongase 4 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH corneal dystrophy (ortholog); diabetic retinopathy (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 8 77914261 77942495 - 22301074;30032202 116906955 MODEL JAAIVD010000027;XM_032909876 XP_032765767 elongation of very long chain fatty acids protein 4 protein-coding 625968522 Cdc42se2 CDC42 small effector 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN regulation of signal transduction (ortholog); FOUND IN plasma membrane (ortholog) 9 37149726 37218699 - 30032202 116908558 MODEL JAAIVD010000002;XM_032911763 XP_032767654 CDC42 small effector protein 2 protein-coding 625968532 Znf652 zinc finger protein 652 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 58634082 58683196 - 30032202 116908761 MODEL JAAIVD010000002;XM_032912112;XM_032912113 XP_032768003;XP_032768004 protein-coding 625968547 LOC116897479 small nucleolar RNA SNORD73 3 67419073 67419146 + 116897479 MODEL JAAIVD010000012;XR_004387503 snorna 625968550 LOC116887852 dystrophin-like X 42450278 42514383 + 22301074;30032202 116887852 MODEL JAAIVD010000014;XM_032889356 XP_032745247 protein-coding 625968563 LOC116883317 hippocampus abundant transcript-like protein 1 14 74536987 74591537 + 22301074 116883317 MODEL JAAIVD010000009;XM_032884373 XP_032740264 protein-coding 625968579 Penk proenkephalin ENCODES a protein that exhibits opioid peptide activity (ortholog); opioid receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN aggressive behavior (ortholog); behavioral fear response (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Anhedonia (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body fiber (ortholog) 1 138560687 138565893 + 22301074;30032202 116903650 MODEL JAAIVD010000025;XM_032906310 XP_032762201 proenkephalin-A protein-coding 625968586 LOC116889010 ubiquitin carboxyl-terminal hydrolase 27-like X 14742635 14745841 + 22301074 116889010 MODEL JAAIVD010000014;XM_032890219 XP_032746110 protein-coding 625968590 Gucy1a2 guanylate cyclase 1 soluble subunit alpha 2 ENCODES a protein that exhibits guanylate cyclase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of nitric oxide mediated signal transduction (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog) 8 207477 291309 - 22301074;30032202 116906690 MODEL JAAIVD010000027;XM_032909481 XP_032765372 guanylate cyclase soluble subunit alpha-2 protein-coding 625968598 Dyrk1a dual specificity tyrosine phosphorylation regulated kinase 1A ENCODES a protein that exhibits actin binding (ortholog); cyclin binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); cardiac muscle hypertrophy (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 7 (ortholog); Cardiomegaly (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); centrosome (ortholog) 4 49950807 50070077 - 22301074;30032202 116898960 MODEL JAAIVD010000003;XM_032900378;XM_032900379;XM_032900380;XM_032900381;XM_032900382 XP_032756269;XP_032756270;XP_032756271;XP_032756272;XP_032756273 dual specificity tyrosine-phosphorylation-regulated kinase 1A protein-coding 625968628 Pnrc1 proline rich nuclear receptor coactivator 1 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog) 1 109784828 109788439 + 30032202 116902307 MODEL JAAIVD010000025;XM_032904755 XP_032760646 proline-rich nuclear receptor coactivator 1 protein-coding 625968634 LOC116887635 histone-lysine N-methyltransferase KMT5C-like 18 11132133 11137178 - 116887635 MODEL JAAIVD010000013 pseudo 625968635 Tyro3 TYRO3 protein tyrosine kinase ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); protein tyrosine kinase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); establishment of localization in cell (ortholog); forebrain cell migration (ortholog); ASSOCIATED WITH 46, XX Disorders of Sex Development (ortholog); hereditary breast ovarian cancer syndrome (ortholog); thrombosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 5 97963025 97982136 + 22301074;30032202 116901822 MODEL JAAIVD010000023;XM_032903980;XM_032903981 XP_032759871;XP_032759872 tyrosine-protein kinase receptor TYRO3 protein-coding 625968662 LOC116887726 small nucleolar RNA SNORA17 18 45944808 45944939 - 116887726 MODEL JAAIVD010000013;XR_004386240 snorna 625968665 LOC116886577 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like 17 5203411 5203614 + 22301074;30032202 116886577 MODEL JAAIVD010000011;XM_032888106 XP_032743997 protein-coding 625968668 Rest RE1 silencing transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cardiac muscle cell myoblast differentiation (ortholog); cellular response to electrical stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 27 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 34025892 34046092 + 30032202 116912405 MODEL JAAIVD010000006;XM_032916464;XM_032916465 XP_032772355;XP_032772356 RE1-silencing transcription factor protein-coding 625968679 LOC116895858 60 kDa heat shock protein, mitochondrial-like 3 93100468 93102549 + 116895858 MODEL JAAIVD010000012 pseudo 625968680 LOC116912758 E3 ubiquitin-protein ligase Hakai-like 11 64387395 64388842 - 116912758 MODEL JAAIVD010000006 pseudo 625968681 LOC116895245 olfactory receptor 146 3 24731 25666 + 22301074;30032202 116895245 MODEL JAAIVD010000012;XM_032896565 XP_032752456 protein-coding 625968684 Anks4b ankyrin repeat and sterile alpha motif domain containing 4B INVOLVED IN brush border assembly (ortholog); protein localization to microvillus (ortholog); protein-containing complex assembly (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum membrane (ortholog); microvillus (ortholog) 2 81511846 81521523 - 22301074 116891585 MODEL JAAIVD010000001;XM_032892765 XP_032748656 ankyrin repeat and SAM domain-containing protein 4B protein-coding 625968690 LOC116910864 39S ribosomal protein L30, mitochondrial-like 10 5504334 5504810 - 116910864 MODEL JAAIVD010000005 pseudo 625968691 Slc9c1 solute carrier family 9 member C1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN motile cilium (ortholog) 4 30264493 30335827 + 22301074;30032202 116897888 MODEL JAAIVD010000003;XM_032899293 XP_032755184 sodium/hydrogen exchanger 10 protein-coding 625968723 Irf6 interferon regulatory factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); cranial skeletal system development (ortholog); epidermis development (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); Congenital Limb Deformities (ortholog); FOUND IN cytoplasm (ortholog) 10 71134459 71154231 + 22301074;30032202 116911319 MODEL JAAIVD010000005;XM_032915233 XP_032771124 protein-coding 625968735 LOC116913488 olfactory receptor 1537-like 12 107593 108752 - 22301074;30032202 116913488 MODEL JAAIVD010000007;XM_032917688 XP_032773579 protein-coding 625968739 LOC116901499 ubiquitin-like protein FUBI 5 48116362 48116806 + 116901499 MODEL JAAIVD010000023 pseudo 625968740 LOC116894119 olfactory receptor 52N4-like 2 103768278 103769186 + 22301074 116894119 MODEL JAAIVD010000001;XM_032895837 XP_032751728 protein-coding 625968743 LOC116910301 40S ribosomal protein S4, X isoform-like 9 48534335 48535134 + 116910301 MODEL JAAIVD010000002 pseudo 625968744 LOC116889631 glyceraldehyde-3-phosphate dehydrogenase-like 1 142626933 142627971 - 116889631 MODEL JAAIVD010000025 pseudo 625968745 LOC116904591 histone RNA hairpin-binding protein-like 6 24016643 24017573 + 116904591 MODEL JAAIVD010000024 pseudo 625968746 Mcemp1 mast cell expressed membrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN inflammatory response (ortholog); Kit signaling pathway (ortholog); mast cell proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell surface (ortholog); protein-containing complex (ortholog) 16 1584287 1591387 + 116885794 MODEL JAAIVD010000004;XM_032887126 XP_032743017 mast cell-expressed membrane protein 1 protein-coding 625968758 Tfr2 transferrin receptor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); transferrin receptor activity (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to iron ion (ortholog); endocytic iron import into cell (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); beta thalassemia (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); external side of plasma membrane (ortholog); HFE-transferrin receptor complex (ortholog) 16 16434188 16450540 - 22301074;30032202 116885534 MODEL JAAIVD010000004;XM_032886832 XP_032742723 transferrin receptor protein 2 protein-coding 625968780 Rsph1 radial spoke head component 1 INVOLVED IN axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); condensed nuclear chromosome (ortholog) 18 2601164 2621645 + 30032202 116887569 MODEL JAAIVD010000013;XM_032889189 XP_032745080 radial spoke head 1 homolog protein-coding 625968792 LOC116894250 olfactory receptor 14C36-like 2 114888608 114889603 + 22301074;30032202 116894250 MODEL JAAIVD010000001;XM_032895956 XP_032751847 protein-coding 625968795 Enpp4 ectonucleotide pyrophosphatase/phosphodiesterase 4 ENCODES a protein that exhibits bis(5'-adenosyl)-triphosphatase activity (ortholog); INVOLVED IN positive regulation of blood coagulation (ortholog); purine ribonucleoside catabolic process (ortholog) 4 85761966 85768329 + 116899143 MODEL JAAIVD010000003;XM_032900684 XP_032756575 bis(5'-adenosyl)-triphosphatase ENPP4 protein-coding 625968802 Zdhhc16 zDHHC palmitoyltransferase 16 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); eye development (ortholog); heart development (ortholog); ASSOCIATED WITH intellectual disability (ortholog) 2 41051419 41058218 + 22301074;30032202 116891168 MODEL JAAIVD010000001;XM_032891971;XM_032891972;XM_032891973;XM_032891974;XM_032891975;XM_032891976 XP_032747862;XP_032747863;XP_032747864;XP_032747865;XP_032747866;XP_032747867 palmitoyltransferase ZDHHC16;zinc finger DHHC-type palmitoyltransferase 16 protein-coding 625968833 Ccdc183 coiled-coil domain containing 183 5 11561546 11570058 + 116901286 MODEL JAAIVD010000023;XM_032903075 XP_032758966 coiled-coil domain-containing protein 183 protein-coding 625968851 LOC116889895 olfactory receptor 6C2-like 1 159906818 159907753 + 22301074;30032202 116889895 MODEL JAAIVD010000025;XM_032890718 XP_032746609 protein-coding 625968854 LOC116884528 neuropeptide Y receptor type 6-like 15 24072963 24074082 + 116884528 MODEL JAAIVD010000010 pseudo 625968855 LOC116913634 olfactory receptor 1537-like 12 182250 183194 - 22301074;30032202 116913634 MODEL JAAIVD010000007;XM_032917905 XP_032773796 protein-coding 625968858 LOC116901772 alpha-enolase-like 5 95310146 95311398 - 116901772 MODEL JAAIVD010000023 pseudo 625968859 LOC116900249 olfactory receptor 1009 5 63039619 63040563 + 22301074;30032202 116900249 MODEL JAAIVD010000023;XM_032902001 XP_032757892 protein-coding 625968862 Grm7 glutamate metabotropic receptor 7 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); adenylate cyclase inhibitor activity (ortholog); calcium channel regulator activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult behavior (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon terminus (ortholog) 6 35016691 35825498 - 22301074;30032202 116903433 MODEL JAAIVD010000024;XM_032905983;XM_032905984;XM_032905985 XP_032761874;XP_032761875;XP_032761876 metabotropic glutamate receptor 7 protein-coding 625968882 Tmem271 transmembrane protein 271 11 18143867 18146248 - 116912198 MODEL JAAIVD010000006;XM_032916132 XP_032772023 protein-coding 625968887 LOC116906076 glyceraldehyde-3-phosphate dehydrogenase-like 7 63606499 63607417 + 116906076 MODEL JAAIVD010000026 pseudo 625968888 LOC116904466 endogenous retrovirus group K member 5 Gag polyprotein-like 6 135846047 135847750 - 22301074 116904466 MODEL JAAIVD010000024;XM_032907278 XP_032763169 protein-coding 625968891 LOC116895018 small nucleolar RNA SNORA48 2 48464498 48464641 + 116895018 MODEL JAAIVD010000001;XR_004387204 snorna 625968894 LOC116894576 NACHT, LRR and PYD domains-containing protein 4C 2 180135542 180172467 - 22301074;30032202 116894576 MODEL JAAIVD010000001;XM_032896295;XM_032896296;XM_032896297 XP_032752186;XP_032752187;XP_032752188 protein-coding 625968916 LOC116886654 GTP-binding protein Rhes-like 17 24785013 24785642 + 116886654 MODEL JAAIVD010000011 pseudo 625968917 Ran RAN, member RAS oncogene family ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); G protein activity (ortholog); GDP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to mineralocorticoid stimulus (ortholog); glycolytic process (ortholog); PARTICIPATES IN CRM1 export pathway; microRNA pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN centriole (ortholog); chromatin (ortholog); cytoplasm (ortholog) 16 24950196 24954475 - 22301074;30032202 116885427 MODEL JAAIVD010000004;XM_032886712;XM_032886713 XP_032742603;XP_032742604 GTP-binding nuclear protein Ran protein-coding 625968932 Scfd2 sec1 family domain containing 2 ASSOCIATED WITH autism spectrum disorder (ortholog) 11 30996644 31301710 - 22301074;30032202 116912911 MODEL JAAIVD010000006;XM_032917168 XP_032773059 sec1 family domain-containing protein 2 protein-coding 625968945 LOC116889538 small nucleolar RNA SNORA26 X 113329174 113329294 - 116889538 MODEL JAAIVD010000014;XR_004386473 snorna 625968948 LOC116887965 60S ribosomal protein L38-like X 66356426 66359307 + 116887965 MODEL JAAIVD010000014 pseudo 625968949 Syngr2 synaptogyrin 2 INVOLVED IN protein targeting (ortholog); regulated exocytosis (ortholog); synaptic vesicle membrane organization (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) 9 66251528 66256057 - 30032202 116908870 MODEL JAAIVD010000002;XM_032912311;XM_032912312 XP_032768202;XP_032768203 synaptogyrin-2 protein-coding 625968962 LOC116887165 olfactory receptor 10A4-like 18 10646077 10647039 + 22301074 116887165 MODEL JAAIVD010000013;XM_032888715 XP_032744606 protein-coding 625968966 LOC116883553 olfactory receptor 2B2-like 14 41989288 41990229 - 22301074 116883553 MODEL JAAIVD010000009;XM_032884732 XP_032740623 protein-coding 625968969 LOC116914161 small nucleolar RNA U3 12 40642888 40643080 - 116914161 MODEL JAAIVD010000007 pseudo 625968970 LOC116911510 olfactory receptor 6K2-like 10 52859159 52860124 + 22301074 116911510 MODEL JAAIVD010000005;XM_032915498 XP_032771389 protein-coding 625968973 LOC116894441 importin subunit alpha-3-like 2 164640358 164641884 + 116894441 MODEL JAAIVD010000001 pseudo 625968974 LOC116889593 sex-determining region Y protein-like Y 1926850 1927383 - 30032202 116889593 MODEL JAAIVD010000015;XM_032890529 XP_032746420 protein-coding 625968978 Rbm27 RNA binding motif protein 27 15 3451258 3514090 + 22301074;30032202 116884284 MODEL JAAIVD010000010;XM_032885380 XP_032741271 RNA-binding protein 27 protein-coding 625969003 Fastk Fas activated serine/threonine kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of RNA splicing (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog) 6 153634556 153638617 - 22301074;30032202 116904206 MODEL JAAIVD010000024;XM_032907127;XM_032907128;XM_032907129;XM_032907130 XP_032763018;XP_032763019;XP_032763020;XP_032763021 fas-activated serine/threonine kinase protein-coding 625969025 Adamts8 ADAM metallopeptidase with thrombospondin type 1 motif 8 ASSOCIATED WITH Moebius syndrome (ortholog); Prostatic Neoplasms (ortholog) 8 26655479 26674944 + 22301074;30032202 116906928 MODEL JAAIVD010000027;XM_032909854 XP_032765745 A disintegrin and metalloproteinase with thrombospondin motifs 8 protein-coding 625969038 Tekt1 tektin 1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); microtubule cytoskeleton (ortholog) 9 43154549 43182137 + 22301074;30032202 116908918 MODEL JAAIVD010000002;XM_032912375 XP_032768266 tektin-1 protein-coding 625969050 Nlgn1 neuroligin 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); neurexin family protein binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); AMPA selective glutamate receptor signaling pathway (ortholog); calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 3 128120382 128979051 + 22301074;30032202 116896993 MODEL JAAIVD010000012;XM_032898585;XM_032898587;XM_032898588;XM_032898589;XM_032898590;XM_032898591;XM_032898592;XM_032898593;XM_032898594;XM_032898595;XM_032898596;XM_032898597;XM_032898598;XM_032898599 XP_032754476;XP_032754478;XP_032754479;XP_032754480;XP_032754481;XP_032754482;XP_032754483;XP_032754484;XP_032754485;XP_032754486;XP_032754487;XP_032754488;XP_032754489;XP_032754490 neuroligin-1 protein-coding 625969095 Rit2 Ras like without CAAX 2 ENCODES a protein that exhibits calmodulin binding (ortholog); chromatin binding (ortholog); GTP binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); maintenance of protein location in cell (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 12777262 12945848 + 22301074;30032202 116884679 MODEL JAAIVD010000010;XM_032885855 XP_032741746 GTP-binding protein Rit2 protein-coding 625969103 Chp1 calcineurin like EF-hand protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); kinase binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); membrane docking (ortholog); membrane fusion (ortholog); ASSOCIATED WITH Spastic Ataxia 9, Autosomal Recessive (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi membrane (ortholog) 5 97721837 97758719 + 22301074 116901811 MODEL JAAIVD010000023;XM_032903971 XP_032759862 calcineurin B homologous protein 1 protein-coding 625969114 Spag7 sperm associated antigen 7 9 50274823 50280808 - 22301074 116909532 MODEL JAAIVD010000002;XM_032913146 XP_032769037 sperm-associated antigen 7 protein-coding 625969125 LOC116907930 serine protease 44 8 101396707 101401283 + 22301074 116907930 MODEL JAAIVD010000027;XM_032911143;XM_032911144 XP_032767034;XP_032767035 protein-coding 625969138 Thap12 THAP domain containing 12 FOUND IN nucleus (ortholog) 2 96978362 96994074 + 22301074 116891716 MODEL JAAIVD010000001;XM_032893005 XP_032748896 52 kDa repressor of the inhibitor of the protein kinase protein-coding 625969147 LOC116894169 olfactory receptor 226 2 105116462 105117445 - 22301074 116894169 MODEL JAAIVD010000001;XM_032895885 XP_032751776 protein-coding 625969150 LOC116889839 flavodoxin/ferredoxin--NADP reductase-like 22301074;30032202 116889839 MODEL JAAIVD010001799;XM_032890672 XP_032746563 protein-coding 625969151 Cog5 component of oligomeric golgi complex 5 INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); inter-Golgi cisterna vesicle-mediated transport (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIi (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi transport complex (ortholog); nucleoplasm (ortholog) 7 45027968 45318696 + 30032202 116904959 MODEL JAAIVD010000026;XM_032907620 XP_032763511 conserved oligomeric Golgi complex subunit 5 protein-coding 625969177 Mtx2 metaxin 2 INVOLVED IN mitochondrial transport (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; ASSOCIATED WITH Mandibuloacral Dysplasia Progeroid Syndrome (ortholog); megacolon (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog); SAM complex (ortholog) 5 52169558 52231064 + 22301074;30032202 116901534 MODEL JAAIVD010000023;XM_032903514 XP_032759405 metaxin-2 protein-coding 625969191 Vxn vexin INVOLVED IN neurogenesis (ortholog); neuron differentiation (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 1 144341640 144365090 + 30032202 116903824 MODEL JAAIVD010000025;XM_032906539 XP_032762430 protein-coding 625969201 Ecrg4 ECRG4 augurin precursor ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); cellular senescence (ortholog); G1 to G0 transition (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); dense core granule (ortholog) 4 119924188 119936446 + 30032202 116898160 MODEL JAAIVD010000003;XM_032899536 XP_032755427 augurin protein-coding 625969209 LOC116900886 olfactory receptor 4P4-like 5 69973698 69975732 - 22301074 116900886 MODEL JAAIVD010000023;XM_032902562 XP_032758453 protein-coding 625969213 LOC116914317 glyceraldehyde-3-phosphate dehydrogenase-like 13 41566297 41623987 - 116914317 MODEL JAAIVD010000008 pseudo 625969214 LOC116903428 uncharacterized LOC116903428 6 33454139 33460209 + 116903428 MODEL JAAIVD010000024;XR_004388276 ncrna 625969218 Ostf1 osteoclast stimulating factor 1 ENCODES a protein that exhibits SH3 domain binding (ortholog) 2 18591668 18644307 - 22301074;30032202 116892244 MODEL JAAIVD010000001;XM_032893813 XP_032749704 osteoclast-stimulating factor 1 protein-coding 625969233 LOC116904646 U6 spliceosomal RNA 6 78225031 78225137 - 116904646 MODEL JAAIVD010000024;XR_004388349 snrna 625969236 Cdx2 caudal type homeobox 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); Anorectal Malformations (ortholog); Barrett's esophagus (ortholog); FOUND IN condensed nuclear chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 6544393 6550297 + 22301074;30032202 116885451 MODEL JAAIVD010000004;XM_032886735 XP_032742626 homeobox protein CDX-2 protein-coding 625969243 Rfx5 regulatory factor X5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of MHC class II biosynthetic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); MHC CLASS II DEFICIENCY 3 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 62285494 62293238 - 30032202 116896576 MODEL JAAIVD010000012;XM_032897795;XM_032897796;XM_032897797 XP_032753686;XP_032753687;XP_032753688 DNA-binding protein RFX5 protein-coding 625969265 LOC116905952 ALK tyrosine kinase receptor-like 7 21250945 21270294 + 22301074 116905952 MODEL JAAIVD010000026;XM_032908953 XP_032764844 protein-coding 625969272 Gjb5 gap junction protein beta 5 INVOLVED IN epididymis development (ortholog); labyrinthine layer morphogenesis (ortholog); spongiotrophoblast differentiation (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog) 1 30925601 30926756 + 22301074;30032202 116886948 MODEL JAAIVD010000025;XM_032888450 XP_032744341 gap junction beta-5 protein protein-coding 625969277 LOC116905706 60S ribosomal protein L34-like 7 67641862 67642285 - 22301074;30032202 116905706 MODEL JAAIVD010000026;XM_032908680 XP_032764571 protein-coding 625969282 Vps45 vacuolar protein sorting 45 homolog ASSOCIATED WITH Familial Myelofibrosis (ortholog); genetic disease (ortholog); severe congenital neutropenia (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 61223077 61282758 + 22301074;30032202 116896526 MODEL JAAIVD010000012;XM_032897707 XP_032753598 vacuolar protein sorting-associated protein 45 protein-coding 625969301 LOC116904701 small nucleolar RNA SNORA48 6 29989772 29989915 + 116904701 MODEL JAAIVD010000024;XR_004388396 snorna 625969304 Ltbp2 latent transforming growth factor beta binding protein 2 INVOLVED IN response to alkaloid (ortholog); supramolecular fiber organization (ortholog); ASSOCIATED WITH autosomal dominant isolated ectopia lentis 1 (ortholog); buphthalmos (ortholog); Cardiac Fibrosis (ortholog) 7 98892980 98985364 - 22301074 116905280 MODEL JAAIVD010000026;XM_032908139;XM_032908140;XM_032908142 XP_032764030;XP_032764031;XP_032764033 latent-transforming growth factor beta-binding protein 2 protein-coding 625969348 Sirt7 sirtuin 7 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K18 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; Sirtuin mediated pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); steatotic liver disease (ortholog); systemic scleroderma (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 63397893 63404522 + 22301074 116908518 MODEL JAAIVD010000002;XM_032911693;XR_004388991 XP_032767584 NAD-dependent protein deacetylase sirtuin-7 protein-coding 625969366 Ackr1 atypical chemokine receptor 1 (Duffy blood group) ENCODES a protein that exhibits C-C chemokine binding (ortholog); INVOLVED IN inflammatory response (ortholog); regulation of chemokine production (ortholog); ASSOCIATED WITH Arteriovenous Fistula (ortholog); malaria (ortholog); Plasmodium vivax malaria (ortholog) 10 52364444 52366086 - 30032202 116910865 MODEL JAAIVD010000005;XM_032914626 XP_032770517 atypical chemokine receptor 1 protein-coding 625969372 LOC116904626 olfactory receptor 6C74-like 6 30154207 30155094 - 22301074;30032202 116904626 MODEL JAAIVD010000024;XM_032907417 XP_032763308 protein-coding 625969375 LOC116895551 uncharacterized LOC116895551 3 122328365 122334328 + 116895551 MODEL JAAIVD010000012;XR_004387286 ncrna 625969379 LOC116887492 40S ribosomal protein S2-like 18 9375654 9376460 + 116887492 MODEL JAAIVD010000013 pseudo 625969380 Scgb1a1 secretoglobin family 1A member 1 ENCODES a protein that exhibits polychlorinated biphenyl binding (ortholog); INVOLVED IN negative regulation of interleukin-13 production (ortholog); negative regulation of interleukin-4 production (ortholog); negative regulation of interleukin-5 production (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); allergic rhinitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nuclear envelope (ortholog) 2 8857238 8860667 + 22301074;30032202 116893627 MODEL JAAIVD010000001;XM_032895341 XP_032751232 uteroglobin protein-coding 625969387 Rhbdl2 rhomboid like 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); FOUND IN plasma membrane (ortholog) 1 34462093 34483320 - 22301074;30032202 116896942 MODEL JAAIVD010000025;XM_032898510 XP_032754401 rhomboid-related protein 2 protein-coding 625969398 LOC116884144 small nucleolar RNA snR60/Z15/Z230/Z193/J17 14 14703305 14703384 - 116884144 MODEL JAAIVD010000009;XR_004385861 snorna 625969401 Lgi4 leucine rich repeat LGI family member 4 INVOLVED IN adult locomotory behavior (ortholog); glial cell development (ortholog); glial cell proliferation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-1 (ortholog); childhood absence epilepsy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN extracellular space (ortholog) 2 164961661 164972131 - 22301074;30032202 116892290 MODEL JAAIVD010000001;XM_032893891 XP_032749782 leucine-rich repeat LGI family member 4 protein-coding 625969414 LOC116888273 uncharacterized LOC116888273 X 5963893 6038124 - 116888273 MODEL JAAIVD010000014;XR_004386296;XR_004386297;XR_004386298 ncrna 625969425 Rfc3 replication factor C subunit 3 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); DNA clamp loader activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog) 16 1021495 1032153 + 22301074;30032202 116885706 MODEL JAAIVD010000004;XM_032887011;XM_032887012 XP_032742902;XP_032742903 protein-coding 625969439 Tle4 TLE family member 4, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 14430173 14563860 - 22301074;30032202 116890999 MODEL JAAIVD010000001;XM_032891677;XM_032891678;XM_032891679 XP_032747568;XP_032747569;XP_032747570 transducin-like enhancer protein 4 protein-coding 625969468 Atl1 atlastin GTPase 1 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN axonogenesis (ortholog); endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory neuropathy type 1D (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 83563577 83654677 + 22301074;30032202 116905126 MODEL JAAIVD010000026;XM_032907871 XP_032763762 atlastin-1 protein-coding 625969487 LOC116884553 selenoprotein K-like 15 2962510 2963073 + 116884553 MODEL JAAIVD010000010 pseudo 625969488 LOC116905538 uncharacterized LOC116905538 7 5374921 5383684 + 116905538 MODEL JAAIVD010000026;XR_004388547 ncrna 625969493 Cdyl2 chromodomain Y like 2 ENCODES a protein that exhibits histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); FOUND IN nucleus (ortholog) 17 36212152 36376601 - 30032202 116886110 MODEL JAAIVD010000011;XM_032887442 XP_032743333 chromodomain Y-like protein 2 protein-coding 625969504 Trpc7 transient receptor potential cation channel subfamily C member 7 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); manganese ion transport (ortholog); ASSOCIATED WITH lung cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 14 81185362 81307840 + 22301074;30032202 116883772 MODEL JAAIVD010000009;XM_032885015 XP_032740906 short transient receptor potential channel 7 protein-coding 625969520 LOC116897718 non-histone chromosomal protein HMG-17-like 4 19498229 19498965 - 116897718 MODEL JAAIVD010000003 pseudo 625969521 C1galt1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 ENCODES a protein that exhibits glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); intestinal epithelial cell development (ortholog); kidney development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN membrane (ortholog) 6 130468744 130512523 - 22301074;30032202 116904084 MODEL JAAIVD010000024;XM_032906951 XP_032762842 glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 protein-coding 625969529 LOC116908392 U1 spliceosomal RNA 8 60200089 60200247 - 116908392 MODEL JAAIVD010000027;XR_004388937 snrna 625969532 LOC116894675 trace amine-associated receptor 7b-like 2 210109206 210110282 + 22301074;30032202 116894675 MODEL JAAIVD010000001;XM_032896377 XP_032752268 protein-coding 625969535 LOC116897993 serine/arginine-rich splicing factor 3-like 4 56521502 56521977 - 116897993 MODEL JAAIVD010000003 pseudo 625969536 Dcaf15 DDB1 and CUL4 associated factor 15 ENCODES a protein that exhibits small molecule binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); regulation of natural killer cell activation (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 17 16181572 16188804 + 30032202 116886698 MODEL JAAIVD010000011;XM_032888200 XP_032744091 DDB1- and CUL4-associated factor 15 protein-coding 625969553 LOC116895310 60S ribosomal protein L7-like 3 23308741 23309485 - 116895310 MODEL JAAIVD010000012 pseudo 625969554 Hras HRas proto-oncogene, GTPase ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to gamma radiation (ortholog); cellular senescence (ortholog); PARTICIPATES IN adenosine signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 2 8283904 8286995 + 22301074;30032202 116890883 MODEL JAAIVD010000001;XM_032891488;XM_032891489 XP_032747379;XP_032747380 GTPase HRas protein-coding 625969570 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41431191 41431264 - 116884157 MODEL JAAIVD010000009 trna 625969571 LOC116912279 cytochrome b-c1 complex subunit 9 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 11 73674112 73676379 - 22301074;30032202 116912279 MODEL JAAIVD010000006;XM_032916275 XP_032772166 protein-coding 625969577 Bag6 BAG cochaperone 6 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); misfolded protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); endoplasmic reticulum stress-induced pre-emptive quality control (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); lung non-small cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 7732784 7745385 + 30032202 116886930 MODEL JAAIVD010000013;XM_032888415;XM_032888416;XM_032888417;XM_032888418;XM_032888419;XM_032888420;XM_032888421;XM_032888422;XM_032888423;XM_032888424;XM_032888425;XM_032888426;XM_032888427;XM_032888428;XM_032888429;XM_032888431;XM_032888432 XP_032744306;XP_032744307;XP_032744308;XP_032744309;XP_032744310;XP_032744311;XP_032744312;XP_032744313;XP_032744314;XP_032744315;XP_032744316;XP_032744317;XP_032744318;XP_032744319;XP_032744320;XP_032744322;XP_032744323 large proline-rich protein BAG6 protein-coding 625969636 LOC116897891 60S ribosomal protein L7a-like 4 31373099 31373439 - 116897891 MODEL JAAIVD010000003;XM_032899297 XP_032755188 protein-coding 625969641 LOC116893868 sperm flagellar protein 1-like 2 61875800 61882095 + 30032202 116893868 MODEL JAAIVD010000001;XM_032895588;XM_032895589;XM_032895590;XM_032895591 XP_032751479;XP_032751480;XP_032751481;XP_032751482 uncharacterized protein LOC116893868 protein-coding 625969661 Znf569 zinc finger protein 569 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 2 166091397 166151717 + 30032202 116892334 MODEL JAAIVD010000001;XM_032893966;XM_032893967;XM_032893968 XP_032749857;XP_032749858;XP_032749859 protein-coding 625969682 LOC116904298 60S ribosomal protein L4-like 6 43802467 43803410 + 116904298 MODEL JAAIVD010000024 pseudo 625969683 LOC116889719 ATP synthase subunit alpha-like 22301074;30032202 116889719 MODEL JAAIVD010000061;XM_032890598 XP_032746489 protein-coding 625969684 Sp140 SP140 nuclear body protein ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); nucleus (ortholog) 4 157721965 157769079 + 22301074;30032202 116899579 MODEL JAAIVD010000003;XM_032901518 XP_032757409 nuclear body protein SP140 protein-coding 625969710 LOC116905564 chloride intracellular channel protein 4-like 7 83334816 83339615 - 116905564 MODEL JAAIVD010000026 pseudo 625969711 LOC116893867 cytosolic 5'-nucleotidase 3A-like 2 61823195 61824109 + 116893867 MODEL JAAIVD010000001 pseudo 625969712 LOC116909404 immunity-related GTPase family M protein 1-like 9 40018254 40021498 - 22301074;30032202 116909404 MODEL JAAIVD010000002;XM_032912969 XP_032768860 protein-coding 625969717 Mtmr10 myotubularin related protein 10 ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog) 2 136068185 136121563 - 116893258 MODEL JAAIVD010000001;XM_032895117 XP_032751008 myotubularin-related protein 10 protein-coding 625969737 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92623877 92623948 - 116904848 MODEL JAAIVD010000024 trna 625969738 Rph3a rabphilin 3A ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN dendritic spine organization (ortholog); regulation of NMDA receptor activity (ortholog); spontaneous neurotransmitter secretion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); extrinsic component of membrane (ortholog) 16 32813888 32888201 + 22301074 116885593 MODEL JAAIVD010000004;XM_032886897 XP_032742788 rabphilin-3A protein-coding 625969764 LOC116907298 pescadillo homolog 8 22790675 22792483 + 116907298 MODEL JAAIVD010000027 pseudo 625969765 LOC116912836 clusterin-associated protein 1-like 11 63944628 63945881 - 116912836 MODEL JAAIVD010000006 pseudo 625969766 Umod uromodulin ENCODES a protein that exhibits IgG binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease (ortholog); autosomal dominant tubulointerstitial kidney disease 1 (ortholog); autosomal dominant tubulointerstitial kidney disease 2 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 82188814 82202019 + 22301074;30032202 116893925 MODEL JAAIVD010000001;XM_032895645 XP_032751536 protein-coding 625969780 Vamp2 vesicle associated membrane protein 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); cellular response to insulin stimulus (ortholog); eosinophil degranulation (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin secretion pathway; vasopressin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND AUTISTIC FEATURES WITH OR WITHOUT HYPERKINETIC MOVEMENTS (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 9 48688380 48690978 + 22301074;30032202 116909367 MODEL JAAIVD010000002;XM_032912915;XM_032912917 XP_032768806;XP_032768808 vesicle-associated membrane protein 2 protein-coding 625969792 Mboat7 membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7 ENCODES a protein that exhibits lysophospholipid acyltransferase activity (ortholog); O-acyltransferase activity (ortholog); INVOLVED IN layer formation in cerebral cortex (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog); phosphatidylinositol acyl-chain remodeling (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); autosomal recessive intellectual developmental disorder 57 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 2 178267803 178282176 - 30032202 116892703 MODEL JAAIVD010000001;XM_032894563;XM_032894564 XP_032750454;XP_032750455 lysophospholipid acyltransferase 7;membrane bound O-acyltransferase domain containing 7 protein-coding 625969806 LOC116894670 trace amine-associated receptor 7b 2 210065503 210066579 + 22301074;30032202 116894670 MODEL JAAIVD010000001;XM_032896373 XP_032752264 protein-coding 625969809 LOC116891953 uncharacterized LOC116891953 2 121361367 121367658 - 116891953 MODEL JAAIVD010000001;XR_004386876;XR_004386877 ncrna 625969817 Kif26b kinesin family member 26B INVOLVED IN establishment of cell polarity (ortholog); positive regulation of cell-cell adhesion (ortholog); ureteric bud invasion (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog) 10 56877531 57280993 + 22301074;30032202 116911778 MODEL JAAIVD010000005;XM_032915772 XP_032771663 kinesin-like protein KIF26B protein-coding 625969836 LOC116900074 aspartate aminotransferase, mitochondrial-like 5 10252822 10254108 + 116900074 MODEL JAAIVD010000023 pseudo 625969837 Kiaa0754 KIAA0754 ortholog 1 34855567 34860266 + 116896990 MODEL JAAIVD010000025;XM_032898586 XP_032754477 uncharacterized protein KIAA0754 homolog protein-coding 625969842 Tgfbr3 transforming growth factor beta receptor 3 ENCODES a protein that exhibits activin binding (ortholog); BMP binding (ortholog); coreceptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); blastocyst development (ortholog); blood vessel development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); COVID-19 (ortholog); endometrial adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 11 16885777 16993042 - 116912372 MODEL JAAIVD010000006;XM_032916431 XP_032772322 transforming growth factor beta receptor type 3 protein-coding 625969861 LOC116887739 small nucleolar RNA SNORA17 18 25148332 25148434 + 116887739 MODEL JAAIVD010000013 pseudo 625969862 LOC116902465 U6 spliceosomal RNA 5 130426500 130426606 - 116902465 MODEL JAAIVD010000023;XR_004388083 snrna 625969865 LOC116887559 serine/arginine-rich splicing factor 6-like 18 9533761 9534537 - 116887559 MODEL JAAIVD010000013 pseudo 625969866 Zdhhc22 zDHHC palmitoyltransferase 22 INVOLVED IN protein localization to plasma membrane (ortholog); protein palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 7 101080341 101099754 - 22301074;30032202 116905313 MODEL JAAIVD010000026;XM_032908202;XM_032908203 XP_032764093;XP_032764094 palmitoyltransferase ZDHHC22;zinc finger DHHC-type palmitoyltransferase 22 protein-coding 625969876 LOC116902630 small Cajal body-specific RNA 21 5 81858015 81858153 + 116902630 MODEL JAAIVD010000023;XR_004388207 ncrna 625969879 LOC116910655 small nucleolar RNA SNORA70 9 34555169 34555292 + 116910655 MODEL JAAIVD010000002 pseudo 625969880 Man2a1 mannosidase alpha class 2A member 1 ENCODES a protein that exhibits hydrolase activity (ortholog); hydrolase activity, hydrolyzing N-glycosyl compounds (ortholog); identical protein binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); liver development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cis-Golgi network (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 4 174656845 174820418 + 22301074;30032202 116899693 MODEL JAAIVD010000003;XM_032901717 XP_032757608 alpha-mannosidase 2 protein-coding 625969906 Nisch nischarin ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); glucose metabolic process (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH Bradycardia (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 13 6871195 6907648 - 22301074;30032202 116915019 MODEL JAAIVD010000008;XM_032919427;XM_032919428 XP_032775318;XP_032775319 protein-coding 625969937 LOC116900319 olfactory receptor 1052-like 5 64318289 64319227 - 22301074;30032202 116900319 MODEL JAAIVD010000023;XM_032902076 XP_032757967 protein-coding 625969940 Mycbp MYC binding protein ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); spermatogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 34397647 34405046 - 30032202 116896931 MODEL JAAIVD010000025;XM_032898502 XP_032754393 C-Myc-binding protein protein-coding 625969949 LOC116905825 RNA-binding protein 8A-like 7 101859806 101860514 - 22301074;30032202 116905825 MODEL JAAIVD010000026;XM_032908792 XP_032764683 protein-coding 625969954 LOC116900706 nuclear factor 1 B-type-like 1 71201453 71405172 + 22301074;30032202 116900706 MODEL JAAIVD010000025;XM_032902412 XP_032758303 protein-coding 625969969 Hs3st4 heparan sulfate-glucosamine 3-sulfotransferase 4 INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 2 77490938 77896541 - 30032202 116891542 MODEL JAAIVD010000001;XM_032892698 XP_032748589 heparan sulfate glucosamine 3-O-sulfotransferase 4 protein-coding 625969974 LOC116888329 developmental pluripotency-associated protein 4-like X 125619022 125619770 + 116888329 MODEL JAAIVD010000014 pseudo 625969975 P2rx4 purinergic receptor P2X 4 ENCODES a protein that exhibits ATP binding (ortholog); ATP-gated ion channel activity (ortholog); cadherin binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); behavioral response to pain (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); cell body (ortholog) 16 31098792 31116945 - 22301074;30032202 116885313 MODEL JAAIVD010000004;XM_032886574 XP_032742465 P2X purinoceptor 4 protein-coding 625969991 Ska3 spindle and kinetochore associated complex subunit 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); kinetochore (ortholog) 12 67004742 67023465 + 30032202 116913394 MODEL JAAIVD010000007;XM_032917576 XP_032773467 spindle and kinetochore-associated protein 3 protein-coding 625970004 Ubxn2a UBX domain protein 2A ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of proteolysis (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 25516543 25545249 - 30032202 116906289 MODEL JAAIVD010000026;XM_032909185 XP_032765076 UBX domain-containing protein 2A protein-coding 625970015 LOC116913700 olfactory receptor 11H4-like 12 72567835 72568821 + 22301074 116913700 MODEL JAAIVD010000007;XM_032917996 XP_032773887 protein-coding 625970018 LOC116893366 heat shock protein HSP 90-alpha-like 2 164657099 164659387 + 116893366 MODEL JAAIVD010000001 pseudo 625970019 LOC116883448 40S ribosomal protein S10-like 14 63573767 63574341 - 30032202 116883448 MODEL JAAIVD010000009;XM_032884595 XP_032740486 protein-coding 625970024 Hivep1 HIVEP zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); HMG box domain binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH epilepsy (ortholog); myoepithelioma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 14 61116856 61151464 + 1901405;30032202 116883238 MODEL JAAIVD010000009;X54250;XM_032884246 CAA38151;XP_032740137 zinc finger protein 40;zinc finger protein AT-BP2 protein-coding 625970033 LOC116913840 transcription factor Spi-C-like 12 25431173 25432983 + 116913840 MODEL JAAIVD010000007 pseudo 625970034 Kiaa0513 KIAA0513 ortholog 17 39757488 39806523 + 116886090 MODEL JAAIVD010000011;XM_032887411;XM_032887412 XP_032743302;XP_032743303 uncharacterized protein KIAA0513 homolog protein-coding 625970052 Zhx3 zinc fingers and homeoboxes 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of osteoblast differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 140060922 140163745 - 22301074;30032202 116902249 MODEL JAAIVD010000023;XM_032904666;XM_032904667;XM_032904668 XP_032760557;XP_032760558;XP_032760559 zinc fingers and homeoboxes protein 3 protein-coding 625970066 Ltbp4 latent transforming growth factor beta binding protein 4 ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN elastic fiber assembly (ortholog); hormone secretion (ortholog); transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IC (ortholog); COVID-19 (ortholog); cutis laxa (ortholog); FOUND IN extracellular matrix (ortholog); microfibril (ortholog) 2 168605335 168639399 + 22301074 116892433 MODEL JAAIVD010000001;XM_032894123 XP_032750014 latent-transforming growth factor beta-binding protein 4 protein-coding 625970101 LOC116883327 uncharacterized LOC116883327 14 63398360 63409380 - 116883327 MODEL JAAIVD010000009;XR_004385748 ncrna 625970106 Mmgt1 membrane magnesium transporter 1 ENCODES a protein that exhibits cobalt ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); inorganic cation transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); copper ion transport (ortholog); iron ion transport (ortholog); ASSOCIATED WITH Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); EMC complex (ortholog) X 116607484 116618348 + 30032202 116888719 MODEL JAAIVD010000014;XM_032890011 XP_032745902 protein-coding 625970114 Apbb1 amyloid beta precursor protein binding family B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system neuron differentiation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); nicotine dependence (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); endoplasmic reticulum (ortholog) 2 104394780 104417613 - 1923810;30032202;7800475;8537337 116891818 Q5XWE9 MODEL AY730550;JAAIVD010000001;X60469;XM_032893174;XM_032893175;XM_032893177;XM_032893178;XM_032893179;XM_032893180 AAU45391;CAA42999;XP_032749065;XP_032749066;XP_032749068;XP_032749069;XP_032749070;XP_032749071 FE65 amyloid-beta A4 precursor protein-binding family B member 1;integrase-like protein, APP interacting protein protein-coding 625970146 LOC116911332 transmembrane protein 126A-like 10 3088967 3089621 - 116911332 MODEL JAAIVD010000005 pseudo 625970147 LOC116888931 eukaryotic translation initiation factor 4B-like X 188954 190823 + 116888931 MODEL JAAIVD010000014 pseudo 625970148 Dok1 docking protein 1 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); intracellular signal transduction (ortholog); macrophage colony-stimulating factor signaling pathway (ortholog); PARTICIPATES IN insulin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 6 63190799 63193291 + 30032202 116902754 MODEL JAAIVD010000024;XM_032905099 XP_032760990 protein-coding 625970157 LOC116910270 60S ribosomal protein L14-like 9 35804681 35805309 + 116910270 MODEL JAAIVD010000002 pseudo 625970158 Gpbar1 G protein-coupled bile acid receptor 1 ENCODES a protein that exhibits G protein-coupled bile acid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); cellular response to bile acid (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); Constipation (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 4 147729105 147731614 + 22301074;30032202 116898224 MODEL JAAIVD010000003;XM_032899579 XP_032755470 G-protein coupled bile acid receptor 1 protein-coding 625970164 LOC116890406 U6 spliceosomal RNA 1 27816262 27816364 - 116890406 MODEL JAAIVD010000025;XR_004386608 snrna 625970167 Cpeb3 cytoplasmic polyadenylation element binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); long-term memory (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical dendrite (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) 2 36624856 36801987 + 30032202 116891131 MODEL JAAIVD010000001;XM_032891854;XM_032891855;XM_032891856;XM_032891857;XM_032891858;XM_032891859;XM_032891860;XM_032891861;XM_032891863;XM_032891864;XM_032891865 XP_032747745;XP_032747746;XP_032747747;XP_032747748;XP_032747749;XP_032747750;XP_032747751;XP_032747752;XP_032747754;XP_032747755;XP_032747756 cytoplasmic polyadenylation element-binding protein 3 protein-coding 625970209 LOC116912705 zinc finger CCCH domain-containing protein 3-like 1 248125449 248159174 - 30032202 116912705 MODEL JAAIVD010000025;XM_032916834 XP_032772725 protein-coding 625970217 Themis thymocyte selection associated INVOLVED IN negative T cell selection (ortholog); positive T cell selection (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH celiac disease (ortholog); inflammatory bowel disease (ortholog); T-Lymphocytopenia (ortholog); FOUND IN cell-cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 2 214735085 214937794 + 30032202 116894691 MODEL JAAIVD010000001;XM_032896390 XP_032752281 protein THEMIS protein-coding 625970227 LOC116900277 olfactory receptor 5AL1-like 5 63442416 63443360 - 22301074;30032202 116900277 MODEL JAAIVD010000023;XM_032902030 XP_032757921 protein-coding 625970230 Cibar2 CBY1 interacting BAR domain containing 2 ASSOCIATED WITH Crohn's disease (ortholog); FOUND IN ciliary basal body (ortholog) 17 39807580 39819149 - 22301074;30032202 116886558 MODEL JAAIVD010000011;XM_032888075 XP_032743966 protein FAM92B protein-coding 625970242 Dennd2d DENN domain containing 2D ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 51823133 51842230 - 30032202 116896403 MODEL JAAIVD010000012;XM_032897542;XM_032897543;XM_032897544 XP_032753433;XP_032753434;XP_032753435 DENN domain-containing protein 2D protein-coding 625970264 Map6 microtubule associated protein 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); dendrite morphogenesis (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Hyperkinesis (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); Golgi apparatus (ortholog) 2 97543224 97607529 + 22301074;30032202 116891719 MODEL JAAIVD010000001;XM_032893009 XP_032748900 microtubule-associated protein 6 protein-coding 625970272 LOC116885985 U6 spliceosomal RNA 16 17983111 17983215 - 116885985 MODEL JAAIVD010000004;XR_004386062 snrna 625970275 LOC116914131 small nucleolar RNA SNORA17 12 35115037 35115167 + 116914131 MODEL JAAIVD010000007;XR_004389692 snorna 625970278 Rab15 RAB15, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN positive regulation of regulated secretory pathway (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 7 90931032 90955618 - 22301074 116905187 MODEL JAAIVD010000026;XM_032907976;XM_032907977 XP_032763867;XP_032763868 ras-related protein Rab-15 protein-coding 625970292 LOC116886044 H/ACA ribonucleoprotein complex subunit 2-like 17 40993069 40993511 + 116886044 MODEL JAAIVD010000011 pseudo 625970293 Fbxl19 F-box and leucine rich repeat protein 19 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cell migration (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH psoriasis (ortholog); psoriatic arthritis (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) 2 74135504 74155448 - 22301074;30032202 116891461 MODEL JAAIVD010000001;XM_032892541;XM_032892542;XM_032892543;XM_032892544;XM_032892545 XP_032748432;XP_032748433;XP_032748434;XP_032748435;XP_032748436 F-box/LRR-repeat protein 19 protein-coding 625970319 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889733 MODEL JAAIVD010000065 trna 625970320 LOC116889678 50S ribosomal protein L17-like 22301074;30032202 116889678 MODEL JAAIVD010000048;XM_032890568 XP_032746459 protein-coding 625970321 Wbp1 WW domain binding protein 1 ENCODES a protein that exhibits WW domain binding (ortholog) 6 63103896 63106288 + 30032202 116903626 MODEL JAAIVD010000024;XM_032906283;XM_032906285;XM_032906286 XP_032762174;XP_032762176;XP_032762177 WW domain-binding protein 1 protein-coding 625970337 Baiap3 BAI1 associated protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); phospholipid binding (ortholog); SNARE binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); G protein-coupled receptor signaling pathway (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytosol (ortholog); dense core granule (ortholog); early endosome membrane (ortholog) 9 2508640 2522580 - 116910555 MODEL JAAIVD010000002;XM_032914464 XP_032770355 BAI1-associated protein 3 protein-coding 625970375 Dip2a disco interacting protein 2 homolog A ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); dendritic spine morphogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); long QT syndrome (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 8 106783263 106861452 + 30032202 116907867 MODEL JAAIVD010000027;XM_032911055 XP_032766946 disco-interacting protein 2 homolog A protein-coding 625970417 LOC116893518 mRNA turnover protein 4 homolog 2 192876367 192878115 - 116893518 MODEL JAAIVD010000001 pseudo 625970418 LOC116886729 small nucleolar RNA SNORA51 17 37780677 37780809 + 116886729 MODEL JAAIVD010000011;XR_004386139 snorna 625970421 Blcap BLCAP apoptosis inducing factor INVOLVED IN apoptotic nuclear changes (ortholog) 5 136901231 136910037 - 116902227 MODEL JAAIVD010000023;XM_032904632 XP_032760523 bladder cancer-associated protein protein-coding 625970427 Hirip3 HIRA interacting protein 3 ENCODES a protein that exhibits H2A-H2B histone complex chaperone activity (ortholog); INVOLVED IN chromatin organization (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 75031156 75034158 - 30032202 116891500 MODEL JAAIVD010000001;XM_032892618;XM_032892620 XP_032748509;XP_032748511 HIRA-interacting protein 3 protein-coding 625970443 Atg14 autophagy related 14 ENCODES a protein that exhibits GTPase binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); axoneme (ortholog); extrinsic component of omegasome membrane (ortholog) 12 75469676 75500067 + 30032202 116913446 MODEL JAAIVD010000007;XM_032917647 XP_032773538 beclin 1-associated autophagy-related key regulator protein-coding 625970457 Chlsn cholesin ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); positive regulation of cholesterol biosynthetic process (ortholog); FOUND IN extracellular space (ortholog) 16 13738965 13840714 + 116885249 MODEL JAAIVD010000004;XM_032886489 XP_032742380 C16H7orf50 chromosome 16 C7orf50 homolog;uncharacterized protein C7orf50 homolog protein-coding 625970466 Bpifa3 BPI fold containing family A member 3 5 133461198 133473594 + 22301074 116900718 MODEL JAAIVD010000023;XM_032902422;XM_032902424 XP_032758313;XP_032758315 BPI fold-containing family A member 3 protein-coding 625970480 LOC116883968 cytochrome P450 4A10-like 1 39270107 39283061 + 116883968 MODEL JAAIVD010000025 pseudo 625970481 Rab34 RAB34, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to glucose stimulus (ortholog); cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); orofaciodigital syndrome XX (ortholog); FOUND IN centriole (ortholog); cytoplasmic vesicle (ortholog); early endosome (ortholog) 9 92247911 92251873 - 22301074;30032202 116909988 MODEL JAAIVD010000002;XM_032913770 XP_032769661 ras-related protein Rab-34 protein-coding 625970496 Boc BOC cell adhesion associated, oncogene regulated INVOLVED IN axon guidance (ortholog); cell projection organization (ortholog); positive regulation of myoblast differentiation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); gastrointestinal stromal tumor (ortholog); holoprosencephaly (ortholog); FOUND IN axon (ortholog); axonal growth cone (ortholog); growth cone (ortholog) 4 29364030 29401516 - 22301074;30032202 116898866 MODEL JAAIVD010000003;XM_032900233;XM_032900234 XP_032756124;XP_032756125 brother of CDO protein-coding 625970520 Slc39a7 solute carrier family 39 member 7 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); intracellular zinc ion homeostasis (ortholog); regulation of ferroptosis (ortholog); ASSOCIATED WITH agammaglobulinemia 9 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog) 18 8294629 8298123 + 22301074;30032202 116887440 MODEL JAAIVD010000013;XM_032889054 XP_032744945 zinc transporter SLC39A7 protein-coding 625970532 LOC116915123 small nucleolar RNA SNORA17 13 22381023 22381154 + 116915123 MODEL JAAIVD010000008;XR_004389804 snorna 625970535 LOC116904315 katanin p80 WD40 repeat-containing subunit B1-like 6 59954882 59955804 - 116904315 MODEL JAAIVD010000024 pseudo 625970536 Krt7 keratin 7 ASSOCIATED WITH cholangiocarcinoma (ortholog); Chronic Hepatitis (ortholog); Copper-Overload Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) 1 261660490 261675608 - 22301074;30032202 116883758 MODEL JAAIVD010000025;XM_032885008 XP_032740899 keratin, type II cytoskeletal 7 protein-coding 625970549 Iqcn IQ motif containing N INVOLVED IN single fertilization (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH spermatogenic failure 78 (ortholog); FOUND IN mitochondrion (ortholog) 13 12957206 12967053 + 22301074 116914554 MODEL JAAIVD010000008;XM_032918904 XP_032774795 IQ domain-containing protein N protein-coding 625970553 LOC116912738 transformer-2 protein homolog beta-like 11 43217643 43219588 + 116912738 MODEL JAAIVD010000006 pseudo 625970554 Rad23a RAD23 nucleotide excision repair protein A ENCODES a protein that exhibits kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN DNA damage response (ortholog); nucleotide-excision repair (ortholog); positive regulation of cell cycle (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 17 15450582 15456617 + 22301074;30032202 116886216 MODEL JAAIVD010000011;XM_032887606;XM_032887607;XM_032887608 XP_032743497;XP_032743498;XP_032743499 RAD23 homolog A, nucleotide excision repair protein;UV excision repair protein RAD23 homolog A protein-coding 625970574 Rasal2 RAS protein activator like 2 INVOLVED IN adipose tissue development (ortholog); gene expression (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Disease Progression (ortholog); Experimental Neoplasms (ortholog) 10 36485362 36754830 - 22301074 116911065 MODEL JAAIVD010000005;XM_032914829;XM_032914830 XP_032770720;XP_032770721 ras GTPase-activating protein nGAP protein-coding 625970598 LOC116896652 uncharacterized LOC116896652 3 64394213 64395842 + 116896652 MODEL JAAIVD010000012;XR_004387353 ncrna 625970603 LOC116885544 S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 16 23642525 23725966 - 22301074;30032202 116885544 MODEL JAAIVD010000004;XM_032886838 XP_032742729 protein-coding 625970623 LOC116887297 40S ribosomal protein S19-like 18 16180856 16182097 - 116887297 MODEL JAAIVD010000013 pseudo 625970624 Wdr11 WD repeat domain 11 INVOLVED IN cilium assembly (ortholog); head development (ortholog); heart development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); Autosomal Recessive Intellectual Developmental Disorder 78 (ortholog); CHARGE syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 72425576 72470401 - 22301074;30032202 116891428 MODEL JAAIVD010000001;XM_032892480;XM_032892481 XP_032748371;XP_032748372 WD repeat-containing protein 11 protein-coding 625970661 LOC116885709 ubiquitin-conjugating enzyme E2 N-like 1 144638 145095 + 116885709 MODEL JAAIVD010000025 pseudo 625970662 Ash1l ASH1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); histone H3K4 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN decidualization (ortholog); flagellated sperm motility (ortholog); negative regulation of acute inflammatory response (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 52 (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64600295 64715665 - 22301074 116896671 MODEL JAAIVD010000012;XM_032898040 XP_032753931 histone-lysine N-methyltransferase ASH1L protein-coding 625970694 LOC116887620 putative olfactory receptor 2I1 18 10144554 10145749 - 116887620 MODEL JAAIVD010000013 pseudo 625970695 LOC116905932 40S ribosomal protein S26-like 7 18823871 18824594 + 116905932 MODEL JAAIVD010000026 pseudo 625970696 Dnmt3l DNA methyltransferase 3 like ENCODES a protein that exhibits enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); chorionic trophoblast cell differentiation (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); ASSOCIATED WITH choline deficiency disease (ortholog); FOUND IN catalytic complex (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) 18 1337010 1351603 + 30032202 116887549 MODEL JAAIVD010000013;XM_032889182 XP_032745073 DNA (cytosine-5)-methyltransferase 3-like protein-coding 625970712 Sdhaf4 succinate dehydrogenase complex assembly factor 4 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN cellular respiration (ortholog); innate immune response (ortholog); mitochondrial respiratory chain complex II assembly (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog) 4 101353144 101361746 - 30032202 116899257 MODEL JAAIVD010000003;XM_032900873;XM_032900874 XP_032756764;XP_032756765 succinate dehydrogenase assembly factor 4, mitochondrial protein-coding 625970722 Pa2g4 proliferation-associated 2G4 ENCODES a protein that exhibits nucleic acid binding (ortholog); transcription corepressor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of cell differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 1 156026094 156034047 - 116906245 MODEL JAAIVD010000025;XM_032909154 XP_032765045 proliferation-associated protein 2G4 protein-coding 625970739 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 95725347 95725418 - 116908473 MODEL JAAIVD010000027 trna 625970740 Rtp2 receptor transporter protein 2 ENCODES a protein that exhibits olfactory receptor binding (ortholog); INVOLVED IN protein insertion into membrane (ortholog); FOUND IN cell surface (ortholog) 4 8708430 8713380 - 30032202 116897822 MODEL JAAIVD010000003;XM_032899237 XP_032755128 receptor-transporting protein 2 protein-coding 625970748 LOC116895870 sterile alpha motif domain-containing protein 3-like 3 104291656 104292544 + 116895870 MODEL JAAIVD010000012 pseudo 625970749 LOC116895373 gamma-aminobutyric acid receptor-associated protein-like 2 3 53393454 53393807 - 116895373 MODEL JAAIVD010000012 pseudo 625970750 Kbtbd13 kelch repeat and BTB domain containing 13 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); regulation of the force of skeletal muscle contraction (ortholog); relaxation of skeletal muscle (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); colorectal cancer (ortholog); genetic disease (ortholog) 8 59699605 59700981 - 22301074 116908124 MODEL JAAIVD010000027;XM_032911414 XP_032767305 kelch repeat and BTB domain-containing protein 13 protein-coding 625970753 LOC116894072 olfactory receptor 51F1-like 2 102988770 102989726 + 116894072 MODEL JAAIVD010000001 pseudo 625970754 LOC116884863 uncharacterized LOC116884863 15 6256967 6288115 - 116884863 MODEL JAAIVD010000010;XR_004385905 ncrna 625970759 Epc1 enhancer of polycomb homolog 1 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Neointima (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear body (ortholog); nuclear membrane (ortholog) 14 29256291 29346681 - 30032202 116883827 MODEL JAAIVD010000009;XM_032885084;XM_032885085;XM_032885086 XP_032740975;XP_032740976;XP_032740977 protein-coding 625970784 LOC116884099 small nucleolar RNA U13 14 66111136 66111240 - 116884099 MODEL JAAIVD010000009;XR_004385838 snorna 625970787 Ccnyl1 cyclin Y like 1 INVOLVED IN flagellated sperm motility (ortholog); neurogenesis (ortholog); regulation of canonical Wnt signaling pathway (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 4 138574824 138610452 + 22301074;30032202 116899452 MODEL JAAIVD010000003;XM_032901231 XP_032757122 cyclin-Y-like protein 1 protein-coding 625970801 Apcdd1l APC down-regulated 1 like 5 144176983 144187743 + 30032202 116901077 MODEL JAAIVD010000023;XM_032902642 XP_032758533 protein APCDD1-like protein-coding 625970808 Tdrd6 tudor domain containing 6 INVOLVED IN germ cell development (ortholog); spermatogenesis (ortholog); spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 4 86212325 86227102 + 30032202 116898054 MODEL JAAIVD010000003;XM_032899448;XM_032899449;XM_032899450;XM_032899451 XP_032755339;XP_032755340;XP_032755341;XP_032755342 tudor domain-containing protein 6 protein-coding 625970823 Stoml2 stomatin like 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); GTPase binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); intracellular calcium ion homeostasis (ortholog); lipid localization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH contact dermatitis (ortholog); FOUND IN actin cytoskeleton (ortholog); immunological synapse (ortholog); membrane raft (ortholog) 1 3473232 3476818 + 22301074 116891184 MODEL JAAIVD010000025;XM_032892006 XP_032747897 stomatin-like protein 2, mitochondrial protein-coding 625970837 LOC116907362 olfactory receptor 150-like 8 82286353 82287279 + 22301074;30032202 116907362 MODEL JAAIVD010000027;XM_032910309 XP_032766200 protein-coding 625970840 LOC116883520 histone H2A type 1-B-like 14 41875076 41875713 + 22301074;30032202 116883520 MODEL JAAIVD010000009;XM_032884693 XP_032740584 protein-coding 625970845 Ap4m1 adaptor related protein complex 4 subunit mu 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); Golgi to endosome transport (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN AP-4 adaptor complex (ortholog); early endosome (ortholog); trans-Golgi network (ortholog) 16 15544477 15552688 + 22301074;30032202 116885192 MODEL JAAIVD010000004;XM_032886412 XP_032742303 AP-4 complex subunit mu-1 protein-coding 625970864 LOC116888676 uncharacterized LOC116888676 X 114034953 114077001 - 116888676 MODEL JAAIVD010000014;XR_004386333;XR_004386334 ncrna 625970876 Cntf ciliary neurotrophic factor ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN astrocyte activation (ortholog); axon regeneration (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog); glial cell projection (ortholog) 2 12800940 12805551 - 22301074;30032202 116890996 MODEL JAAIVD010000001;XM_032891674 XP_032747565 protein-coding 625970882 LOC116883880 cysteine-rich protein 2-like 1 262192799 262193891 + 116883880 MODEL JAAIVD010000025;XR_004385801 pseudo 625970885 LOC116906395 small nucleolar RNA SNORD113/SNORD114 family 7 127263371 127263444 + 116906395 MODEL JAAIVD010000026;XR_004388663 snorna 625970888 Rnf215 ring finger protein 215 11 73117958 73123957 + 30032202 116912843 MODEL JAAIVD010000006;XM_032917047;XM_032917048 XP_032772938;XP_032772939 protein-coding 625970903 LOC116884775 60S ribosomal protein L10-like 15 74125192 74125946 - 116884775 MODEL JAAIVD010000010 pseudo 625970904 LOC116888953 ferritin light chain 1-like X 4496586 4516996 + 116888953 MODEL JAAIVD010000014 pseudo 625970905 LOC116900900 vacuolar protein sorting-associated protein 26C-like 5 74540150 74687767 - 116900900 MODEL JAAIVD010000023 pseudo 625970906 LOC116890489 small Cajal body-specific RNA 1 1 25405265 25405429 + 116890489 MODEL JAAIVD010000025;XR_004386676 ncrna 625970909 Gdf11 growth differentiation factor 11 INVOLVED IN activin receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Myocardial Reperfusion Injury (ortholog); orofacial cleft (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) 1 156361832 156370885 - 22301074;30032202 116906579 MODEL JAAIVD010000025;XM_032909315 XP_032765206 growth/differentiation factor 11 protein-coding 625970915 LOC116910278 ral guanine nucleotide dissociation stimulator-like 9 39149754 39162836 - 116910278 MODEL JAAIVD010000002 pseudo 625970916 LOC116911034 sodium/potassium-transporting ATPase subunit alpha-2 10 51384304 51407310 - 22301074;30032202 116911034 MODEL JAAIVD010000005;XM_032914774;XM_032914775 XP_032770665;XP_032770666 protein-coding 625970946 Scml4 Scm polycomb group protein like 4 18 42572380 42662699 + 22301074 116887289 MODEL JAAIVD010000013;XM_032888868 XP_032744759 sex comb on midleg-like protein 4 protein-coding 625970957 Tspan10 tetraspanin 10 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog) 9 63578382 63582688 - 22301074;30032202 116910399 MODEL JAAIVD010000002;XM_032914239 XP_032770130 tetraspanin-10 protein-coding 625970963 Tmem234 transmembrane protein 234 1 28541838 28550668 - 116896104 MODEL JAAIVD010000025;XM_032897072 XP_032752963 protein-coding 625970972 LOC116893668 DNA-directed RNA polymerases I, II, and III subunit RPABC4-like 2 12110238 12110696 - 22301074;30032202 116893668 MODEL JAAIVD010000001;XM_032895383 XP_032751274 protein-coding 625970977 Mtcp1 mature T cell proliferation 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog) 15 34781383 34784805 - 22301074;30032202 116884473 MODEL JAAIVD010000010;XM_032885589 XP_032741480 protein p13 MTCP-1 protein-coding 625970985 Hspb6 heat shock protein family B (small) member 6 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); protein folding (ortholog); ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); heart disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 2 165454295 165457082 - 22301074;30032202 116892313 MODEL JAAIVD010000001;XM_032893936;XM_032893937 XP_032749827;XP_032749828 heat shock protein beta-6 protein-coding 625970996 LOC116909219 DNA repair endonuclease XPF 9 8148311 8193003 + 30032202 116909219 MODEL JAAIVD010000002;XM_032912720 XP_032768611 protein-coding 625971006 LOC116910945 uncharacterized LOC116910945 10 76903296 76905524 - 116910945 MODEL JAAIVD010000005 pseudo 625971007 Gzmm granzyme M ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); T cell mediated cytotoxicity (ortholog) 1 155179043 155184759 - 22301074 116905713 MODEL JAAIVD010000025;XM_032908687;XM_032908691 XP_032764578;XP_032764582 protein-coding 625971018 Slurp1 secreted LY6/PLAUR domain containing 1 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); INVOLVED IN locomotory behavior (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH mal de Meleda (ortholog); palmoplantar keratosis (ortholog); FOUND IN extracellular space (ortholog) 1 247469500 247470818 - 30032202 116890131 MODEL JAAIVD010000025;XM_032890868 XP_032746759 secreted Ly-6/uPAR-related protein 1 protein-coding 625971024 Ppp1r12a protein phosphatase 1 regulatory subunit 12A ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); enzyme inhibitor activity (ortholog); phosphatase regulator activity (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); centrosome cycle (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); GENITOURINARY AND/OR BRAIN MALFORMATION SYNDROME (ortholog); FOUND IN A band (ortholog); actin cytoskeleton (ortholog); centrosome (ortholog) 1 186387602 186498148 + 22301074;30032202 116908774 MODEL JAAIVD010000025;XM_032912149;XM_032912156;XM_032912166;XM_032912174 XP_032768040;XP_032768047;XP_032768057;XP_032768065 protein-coding 625971061 LOC116894898 U6 spliceosomal RNA 2 17960597 17960706 - 116894898 MODEL JAAIVD010000001;XR_004387103 snrna 625971064 LOC116894644 cytochrome c, somatic-like 2 199409886 199410221 + 22301074;30032202 116894644 MODEL JAAIVD010000001;XM_032896356 XP_032752247 protein-coding 625971068 LOC116889709 glyceraldehyde-3-phosphate dehydrogenase-like 1 145450946 145451965 + 116889709 MODEL JAAIVD010000025 pseudo 625971069 Ano3 anoctamin 3 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); detection of mechanical stimulus (ortholog); ASSOCIATED WITH dystonia (ortholog); dystonia 24 (ortholog); Febrile Seizures (ortholog) 5 88934668 89217770 - 22301074;30032202 116901734 MODEL JAAIVD010000023;XM_032903871 XP_032759762 anoctamin-3 protein-coding 625971100 LOC116900458 olfactory receptor 140-like 5 71168464 71169396 - 22301074 116900458 MODEL JAAIVD010000023;XM_032902199 XP_032758090 protein-coding 625971103 Mphosph8 M-phase phosphoprotein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of gene expression via chromosomal CpG island methylation (ortholog); negative regulation of gene expression, epigenetic (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); heterochromatin (ortholog) 12 68135445 68162885 - 22301074;30032202 116913083 MODEL JAAIVD010000007;XM_032917214 XP_032773105 protein-coding 625971121 Slc26a3 solute carrier family 26 member 3 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); intracellular pH elevation (ortholog); membrane hyperpolarization (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH congenital secretory chloride diarrhea 1 (ortholog); diarrhea (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) 7 44813363 44853386 + 22301074;30032202 116904950 MODEL JAAIVD010000026;XM_032907594;XM_032907595;XM_032907596;XM_032907597;XM_032907598;XM_032907599;XM_032907600;XM_032907601;XM_032907602 XP_032763485;XP_032763486;XP_032763487;XP_032763488;XP_032763489;XP_032763490;XP_032763491;XP_032763492;XP_032763493 chloride anion exchanger protein-coding 625971167 LOC116889727 ATP-dependent DNA helicase PcrA-like 22301074;30032202 116889727 MODEL JAAIVD010000065;XM_032890602 XP_032746493 protein-coding 625971168 Zranb2 zinc finger RANBP2-type containing 2 FOUND IN nucleoplasm (ortholog) 3 4052797 4066649 - 30032202 116896131 MODEL JAAIVD010000012;XM_032897115 XP_032753006 zinc finger Ran-binding domain-containing protein 2 protein-coding 625971182 LOC116899343 heat shock protein HSP 90-beta-like 4 119422282 119424488 - 22301074;30032202 116899343 MODEL JAAIVD010000003;XM_032901031 XP_032756922 protein-coding 625971186 LOC116889179 peptidyl-prolyl cis-trans isomerase D-like X 54818379 54819489 - 116889179 MODEL JAAIVD010000014 pseudo 625971187 Kcp kielin cysteine rich BMP regulator INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); positive regulation of BMP signaling pathway (ortholog); FOUND IN extracellular space (ortholog) 6 110057179 110093376 + 22301074 116904013 MODEL JAAIVD010000024;XM_032906833;XM_032906834 XP_032762724;XP_032762725 kielin/chordin-like protein protein-coding 625971240 LOC116906127 uncharacterized LOC116906127 7 86700843 86705721 + 116906127 MODEL JAAIVD010000026 pseudo 625971241 LOC116907574 olfactory receptor 145-like 8 31544085 31545032 + 22301074;30032202 116907574 MODEL JAAIVD010000027;XM_032910609 XP_032766500 protein-coding 625971244 Tgfbi transforming growth factor beta induced ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); chondrocyte differentiation (ortholog); ASSOCIATED WITH corneal dystrophy (ortholog); Diabetic Nephropathies (ortholog); epithelial basement membrane dystrophy (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 14 81432381 81459936 - 30032202 116883776 MODEL JAAIVD010000009;XM_032885020 XP_032740911 transforming growth factor-beta-induced protein ig-h3 protein-coding 625971263 LOC116900023 eukaryotic translation initiation factor 4E-like 5 11465358 11466089 + 116900023 MODEL JAAIVD010000023 pseudo 625971264 Apln apelin ENCODES a protein that exhibits apelin receptor binding (ortholog); hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); apelin receptor signaling pathway (ortholog); coronary vasculature development (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Cardiomegaly (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) X 110374695 110407158 + 22301074;30032202 116889125 MODEL JAAIVD010000014;XM_032890297;XM_032890298 XP_032746188;XP_032746189 protein-coding 625971274 Abcg1 ATP binding cassette subfamily G member 1 ENCODES a protein that exhibits ABC-type sterol transporter activity (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); cellular response to high density lipoprotein particle stimulus (ortholog); cholesterol efflux (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Colorectal Neoplasms (ortholog); end stage renal disease (ortholog); FOUND IN endosome (ortholog); external side of plasma membrane (ortholog); Golgi apparatus (ortholog) 18 2769022 2824647 - 22301074;30032202 116887020 MODEL JAAIVD010000013;XM_032888507 XP_032744398 ATP-binding cassette sub-family G member 1 protein-coding 625971293 LOC116907117 heat shock protein HSP 90-alpha-like 8 81832804 81834979 - 116907117 MODEL JAAIVD010000027;XR_004388806 pseudo 625971296 Ccdc178 coiled-coil domain containing 178 INVOLVED IN manchette assembly (ortholog); spermatid development (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) 15 21555674 21905415 + 116884857 MODEL JAAIVD010000010;XM_032886100 XP_032741991 coiled-coil domain-containing protein 178 protein-coding 625971319 Ddn dendrin ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 271626326 271630351 - 30032202 116884845 MODEL JAAIVD010000025;XM_032886087 XP_032741978 protein-coding 625971325 Gpr37 G protein-coupled receptor 37 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to reactive oxygen species (ortholog); dendrite development (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); malignant mesothelioma (ortholog); Parkinson's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 6 114036346 114058252 - 30032202 116904030 MODEL JAAIVD010000024;XM_032906860 XP_032762751 prosaposin receptor GPR37 protein-coding 625971331 LOC116907488 glutamate receptor 4-like 8 1104126 1261726 - 116907488 MODEL JAAIVD010000027;XM_032910479;XM_032910480;XM_032910481 XP_032766370;XP_032766371;XP_032766372 protein-coding 625971350 Kcnab2 potassium voltage-gated channel subfamily A regulatory beta subunit 2 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); myoblast differentiation (ortholog); neuromuscular process (ortholog); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) 1 8264059 8352622 + 22301074;30032202 116892203 MODEL JAAIVD010000025;XM_032893749;XM_032893759;XM_032893768 XP_032749640;XP_032749650;XP_032749659 voltage-gated potassium channel subunit beta-2 protein-coding 625971376 LOC116884021 D-3-phosphoglycerate dehydrogenase-like 14 56380941 56382596 + 116884021 MODEL JAAIVD010000009 pseudo 625971377 LOC116899674 ATP synthase F(0) complex subunit C1, mitochondrial-like 1 31132732 31133142 - 22301074;30032202 116899674 MODEL JAAIVD010000025;XM_032901863 XP_032757754 protein-coding 625971380 LOC116914266 U6 snRNA-associated Sm-like protein LSm3 13 31641200 31641505 + 116914266 MODEL JAAIVD010000008 pseudo 625971381 Ginm1 glycosylated integral membrane protein 1 2 229258213 229275200 + 116893037 MODEL JAAIVD010000001;XM_032895000;XM_032895001 XP_032750891;XP_032750892 glycoprotein integral membrane 1;glycoprotein integral membrane protein 1 protein-coding 625971395 LOC116900144 olfactory receptor 1L6-like 5 14861411 14862340 + 22301074;30032202 116900144 MODEL JAAIVD010000023;XM_032901917 XP_032757808 protein-coding 625971398 LOC116909594 uncharacterized LOC116909594 9 87234020 87239513 - 116909594 MODEL JAAIVD010000002;XR_004389084 ncrna 625971402 LOC116888272 mitochondrial 2-oxodicarboxylate carrier-like X 52268754 52269631 + 116888272 MODEL JAAIVD010000014 pseudo 625971403 Spryd7 SPRY domain containing 7 12 62861708 62886590 + 22301074 116913529 MODEL JAAIVD010000007;XM_032917727;XM_032917728 XP_032773618;XP_032773619 SPRY domain-containing protein 7 protein-coding 625971414 LOC116886130 hepatitis A virus cellular receptor 1 homolog 17 16266510 16266863 - 30032202 116886130 MODEL JAAIVD010000011;XM_032887471 XP_032743362 protein-coding 625971417 Tec tec protein tyrosine kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); integrin-mediated signaling pathway (ortholog); regulation of platelet activation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; FOUND IN cell-cell junction (ortholog); cytoskeleton (ortholog); plasma membrane (ortholog) 11 29565334 29629230 - 22301074;30032202 116912242 MODEL JAAIVD010000006;XM_032916221 XP_032772112 tyrosine-protein kinase Tec protein-coding 625971439 Dmac2 distal membrane arm assembly component 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrion (ortholog) 2 169168242 169179595 - 116892455 MODEL JAAIVD010000001;XM_032894168;XM_032894169;XM_032894170 XP_032750059;XP_032750060;XP_032750061 distal membrane arm assembly complex 2;distal membrane-arm assembly complex protein 2 protein-coding 625971455 LOC116907798 calcineurin subunit B type 1-like 8 16243478 16244002 + 116907798 MODEL JAAIVD010000027 pseudo 625971456 Slc35f4 solute carrier family 35 member F4 12 73527154 73774500 + 22301074 116913993 MODEL JAAIVD010000007;XM_032918268;XM_032918269 XP_032774159;XP_032774160 protein-coding 625971472 Tubb4a tubulin beta 4A class IVa ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); BROWN SYNDROME (ortholog); cerebral palsy (ortholog); FOUND IN axoneme (ortholog); cell projection (ortholog); cilium (ortholog) 4 88458261 88464805 - 22301074;30032202 116899210 MODEL JAAIVD010000003;XM_032900802 XP_032756693 tubulin beta-4A chain protein-coding 625971480 LOC116910908 DNA-directed RNA polymerase I subunit RPA12-like 10 50257073 50260616 - 116910908 MODEL JAAIVD010000005 pseudo 625971481 LOC116887692 N-alpha-acetyltransferase 11-like 18 23997034 23997695 + 116887692 MODEL JAAIVD010000013 pseudo 625971482 LOC116890619 5S ribosomal RNA 1 183381443 183381561 + 116890619 MODEL JAAIVD010000025 pseudo 625971483 LOC116890275 40S ribosomal protein S8-like 1 18633896 18635455 + 116890275 MODEL JAAIVD010000025 pseudo 625971484 LOC116898202 high mobility group protein HMG-I/HMG-Y-like 4 138234399 138234811 + 116898202 MODEL JAAIVD010000003 pseudo 625971485 LOC116906888 sialin 8 72718476 72737925 - 22301074;30032202 116906888 MODEL JAAIVD010000027;XM_032909801 XP_032765692 protein-coding 625971495 LOC116897055 60S ribosomal protein L27-like 3 152575870 152576279 + 116897055 MODEL JAAIVD010000012 pseudo 625971496 Sparc secreted protein acidic and cysteine rich ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); extracellular matrix binding (ortholog); INVOLVED IN bone development (ortholog); cellular response to growth factor stimulus (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adrenocortical carcinoma (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) 9 37815104 37837029 - 22301074;30032202 116910528 MODEL JAAIVD010000002;XM_032914431 XP_032770322 protein-coding 625971510 LOC116907447 uncharacterized LOC116907447 8 112136031 112137673 + 116907447 MODEL JAAIVD010000027;XR_004388826 ncrna 625971515 LOC116891957 alpha-enolase-like 2 13762111 13770853 + 116891957 MODEL JAAIVD010000001 pseudo 625971516 C11H7orf57 chromosome 11 C7orf57 homolog 11 78110882 78123747 + 116912712 MODEL JAAIVD010000006;XM_032916839 XP_032772730 uncharacterized protein C7orf57 homolog protein-coding 625971526 LOC116894977 U1 spliceosomal RNA 2 186605139 186605301 + 116894977 MODEL JAAIVD010000001;XR_004387168 snrna 625971529 Stk3 serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cell differentiation involved in embryonic placenta development (ortholog); central nervous system development (ortholog); centrosome separation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 1 208511927 208747830 - 22301074;30032202 116910502 MODEL JAAIVD010000025;XM_032914403 XP_032770294 serine/threonine-protein kinase 3 protein-coding 625971545 LOC116885564 small integral membrane protein 10-like protein 2A 16 9572912 9601016 - 116885564 MODEL JAAIVD010000004;XM_032886857 XP_032742748 protein-coding 625971551 LOC116898078 sulfotransferase 1C1 4 91070116 91116167 - 22301074;30032202 116898078 MODEL JAAIVD010000003;XM_032899469 XP_032755360 protein-coding 625971563 Pnkp polynucleotide kinase 3'-phosphatase ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); polynucleotide 3'-phosphatase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH ataxia with oculomotor apraxia type 1 (ortholog); ataxia-oculomotor apraxia type 4 (ortholog); Charcot-Marie-Tooth disease type 2B2 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 154680158 154685484 - 22301074;30032202 116892186 MODEL JAAIVD010000001;XM_032893707;XM_032893708;XM_032893710 XP_032749598;XP_032749599;XP_032749601 bifunctional polynucleotide phosphatase/kinase protein-coding 625971592 LOC116899915 U1 spliceosomal RNA 4 50211436 50211599 - 116899915 MODEL JAAIVD010000003;XR_004387887 snrna 625971595 Ints15 integrator complex subunit 15 INVOLVED IN brain development (ortholog); eye development (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN chromosome (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 16 9828401 9842392 + 116885350 MODEL JAAIVD010000004;XM_032886625;XM_032886626 XP_032742516;XP_032742517 C16H7orf26 chromosome 16 C7orf26 homolog;uncharacterized protein C7orf26 homolog protein-coding 625971608 LOC116907342 ETS translocation variant 5-like 1 157221090 157222040 + 116907342 MODEL JAAIVD010000025 pseudo 625971609 Fhl3 four and a half LIM domains 3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog); stress fiber (ortholog); Z disc (ortholog) 1 33592379 33600026 - 30032202 116896892 MODEL JAAIVD010000025;XM_032898441;XM_032898447 XP_032754332;XP_032754338 four and a half LIM domains protein 3 protein-coding 625971622 Glis2 GLIS family zinc finger 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation involved in kidney development (ortholog); hematopoietic stem cell homeostasis (ortholog); kidney development (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); kidney disease (ortholog); nephronophthisis (ortholog); FOUND IN cytoplasm (ortholog); non-motile cilium (ortholog); nuclear speck (ortholog) 9 17275842 17296120 - 30032202 116909687 MODEL JAAIVD010000002;XM_032913348 XP_032769239 zinc finger protein GLIS2 protein-coding 625971633 LOC116910443 olfactory receptor 1D2-like 9 33707173 33708115 + 116910443 MODEL JAAIVD010000002 pseudo 625971634 Cntn3 contactin 3 INVOLVED IN neuron projection development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autistic disorder (ortholog) 6 44754825 45111589 + 30032202 116903457 MODEL JAAIVD010000024;XM_032906010 XP_032761901 contactin-3 protein-coding 625971661 Oplah 5-oxoprolinase, ATP-hydrolysing ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; ASSOCIATED WITH 5-Oxoprolinase Deficiency (ortholog); autosomal dominant nocturnal frontal lobe epilepsy (ortholog); COVID-19 (ortholog) 1 248623276 248646870 - 30032202 116912998 MODEL JAAIVD010000025;XM_032917182;XM_032917183;XM_032917184;XM_032917185 XP_032773073;XP_032773074;XP_032773075;XP_032773076 5-oxoprolinase protein-coding 625971701 Hprt1 hypoxanthine phosphoribosyltransferase 1 ENCODES a protein that exhibits guanine phosphoribosyltransferase activity (ortholog); hypoxanthine phosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN adenine metabolic process (ortholog); AMP salvage (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); familial hypocalciuric hypercalcemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 116233737 116265544 - 22301074;30032202 116888605 MODEL JAAIVD010000014;XM_032889905 XP_032745796 hypoxanthine-guanine phosphoribosyltransferase protein-coding 625971714 Mtmr12 myotubularin related protein 12 FOUND IN cytoplasm (ortholog) 3 168818577 168888806 - 116897118 MODEL JAAIVD010000012;XM_032898763 XP_032754654 myotubularin-related protein 12 protein-coding 625971734 LOC116913948 uncharacterized LOC116913948 12 19737927 19738678 + 116913948 MODEL JAAIVD010000007;XR_004389647 ncrna 625971738 LOC116911613 phosphoenolpyruvate carboxykinase [GTP], mitochondrial-like 10 28033601 28035590 - 116911613 MODEL JAAIVD010000005 pseudo 625971739 Pip5kl1 phosphatidylinositol-4-phosphate 5-kinase like 1 ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of mitochondrial membrane potential (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cell projection (ortholog); cytosol (ortholog) 5 3059504 3068328 - 22301074 116901140 MODEL JAAIVD010000023;XM_032902745;XM_032902746;XM_032902747 XP_032758636;XP_032758637;XP_032758638 phosphatidylinositol 4-phosphate 5-kinase-like protein 1 protein-coding 625971757 Adam7 ADAM metallopeptidase domain 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); INVOLVED IN epididymis development (ortholog); epithelial cell morphogenesis (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); plasma membrane (ortholog) 12 55837252 55887472 + 22301074;30032202 116913788 MODEL JAAIVD010000007;XM_032918097 XP_032773988 disintegrin and metalloproteinase domain-containing protein 7 protein-coding 625971784 LOC116897041 thioredoxin-like protein 4A 3 146231798 146743604 - 22301074;30032202 116897041 MODEL JAAIVD010000012;XM_032898661;XM_032898662 XP_032754552;XP_032754553 protein-coding 625971794 Pbdc1 polysaccharide biosynthesis domain containing 1 X 64913118 64952475 + 30032202 116889293 MODEL JAAIVD010000014;XM_032890424;XM_032890425 XP_032746315;XP_032746316 protein PBDC1 protein-coding 625971807 Phf14 PHD finger protein 14 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN germinal center B cell differentiation (ortholog); lung alveolus development (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 6 126721827 126872461 - 30032202 116904075 MODEL JAAIVD010000024;XM_032906939 XP_032762830 protein-coding 625971829 LOC116908374 small nucleolar RNA SNORA18 8 11108601 11108731 + 116908374 MODEL JAAIVD010000027;XR_004388921 snorna 625971832 LOC116902568 small nucleolar RNA SNORA48 5 98956832 98956974 + 116902568 MODEL JAAIVD010000023;XR_004388164 snorna 625971835 LOC116885737 uncharacterized LOC116885737 16 15654277 15664547 - 116885737 MODEL JAAIVD010000004;XR_004386038 ncrna 625971840 Lcn9 lipocalin 9 ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog) 5 11258902 11261203 - 30032202 116900084 MODEL JAAIVD010000023;XM_032901866 XP_032757757 epididymal-specific lipocalin-9 protein-coding 625971851 LOC116909454 CMRF-35-like molecule 4 9 69124585 69129187 + 30032202 116909454 MODEL JAAIVD010000002;XM_032913035;XM_032913036 XP_032768926;XP_032768927 protein-coding 625971863 LOC116893292 cold shock domain-containing protein E1-like 2 149090518 149091689 - 116893292 MODEL JAAIVD010000001 pseudo 625971864 LOC116900796 60S ribosomal protein L21-like 5 157753733 157754278 - 22301074;30032202 116900796 MODEL JAAIVD010000023;XM_032902507 XP_032758398 protein-coding 625971869 LOC116908327 U6 spliceosomal RNA 8 61337258 61337364 - 116908327 MODEL JAAIVD010000027;XR_004388884 snrna 625971872 Txnl1 thioredoxin like 1 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 15 67592263 67622120 + 116884271 MODEL JAAIVD010000010;XM_032885355 XP_032741246 thioredoxin-like protein 1 protein-coding 625971884 Sarnp SAP domain containing ribonucleoprotein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 156294775 156355259 + 30032202 116906557 MODEL JAAIVD010000025;XM_032909274;XM_032909281 XP_032765165;XP_032765172 SAP domain-containing ribonucleoprotein protein-coding 625971900 LOC116910940 methionine adenosyltransferase 2 subunit beta-like 10 75326428 75327348 + 116910940 MODEL JAAIVD010000005 pseudo 625971901 LOC116914906 host cell factor C1 regulator 1-like 13 2670470 2671030 + 116914906 MODEL JAAIVD010000008 pseudo 625971902 Slc26a8 solute carrier family 26 member 8 ENCODES a protein that exhibits chloride channel activity (ortholog); oxalate transmembrane transporter activity (ortholog); sulfate transmembrane transporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH schizophrenia (ortholog); spermatogenic failure 3 (ortholog); FOUND IN plasma membrane (ortholog); sperm annulus (ortholog) 18 5174088 5222759 + 22301074;30032202 116887675 MODEL JAAIVD010000013;XM_032889269;XM_032889270;XM_032889271;XM_032889272;XM_032889273 XP_032745160;XP_032745161;XP_032745162;XP_032745163;XP_032745164 testis anion transporter 1 protein-coding 625971933 LOC116888039 ubiquitin-40S ribosomal protein S27a-like X 85807432 85807905 + 116888039 MODEL JAAIVD010000014 pseudo 625971934 Cpvl carboxypeptidase vitellogenic like 6 87107494 87211454 + 22301074;30032202 116902828 MODEL JAAIVD010000024;XM_032905159;XM_032905160;XM_032905161 XP_032761050;XP_032761051;XP_032761052 probable serine carboxypeptidase CPVL protein-coding 625971956 LOC116912793 elongation factor 2-like 11 9827105 9829775 + 116912793 MODEL JAAIVD010000006 pseudo 625971957 Capn15 calpain 15 ASSOCIATED WITH coloboma (ortholog); OCULOGASTROINTESTINAL NEURODEVELOPMENTAL SYNDROME (ortholog) 9 3216904 3243221 - 22301074;30032202 116908844 MODEL JAAIVD010000002;XM_032912267;XM_032912268;XM_032912269;XM_032912270;XM_032912271;XM_032912273;XM_032912274;XR_004389032;XR_004389033 XP_032768158;XP_032768159;XP_032768160;XP_032768161;XP_032768162;XP_032768164;XP_032768165 calpain-15 protein-coding 625972001 LOC116883258 core histone macro-H2A.1 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); chromatin binding (ortholog); INVOLVED IN DNA repair (ortholog); dosage compensation by inactivation of X chromosome (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH myelodysplastic syndrome (ortholog); FOUND IN Barr body (ortholog); chromatin (ortholog); condensed chromosome (ortholog) 14 74405158 74441548 - 22301074;30032202 116883258 MODEL JAAIVD010000009;XM_032884253 XP_032740144 protein-coding 625972012 LOC116912791 transmembrane protease serine 11D 11 675686 733756 - 22301074 116912791 MODEL JAAIVD010000006;XM_032916953 XP_032772844 protein-coding 625972026 Nhsl1 NHS like 1 2 218354819 218487375 - 30032202 116892988 MODEL JAAIVD010000001;XM_032894947;XM_032894948 XP_032750838;XP_032750839 NHS-like protein 1 protein-coding 625972041 Rnf151 ring finger protein 151 FOUND IN nucleus (ortholog) 9 2001828 2006367 - 22301074;30032202 116909692 MODEL JAAIVD010000002;XM_032913354;XM_032913355 XP_032769245;XP_032769246 protein-coding 625972053 Smim7 small integral membrane protein 7 13 14384957 14389052 - 116914441 MODEL JAAIVD010000008;XM_032918741 XP_032774632 protein-coding 625972062 LOC116897758 keratin-associated protein 10-8-like 4 6552557 6559273 + 116897758 MODEL JAAIVD010000003;XM_032899188 XP_032755079 protein-coding 625972068 Atg16l1 autophagy related 16 like 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); axonal transport (ortholog); C-terminal protein lipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Crohn's disease (ortholog); inflammatory bowel disease (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 4 159870694 159906616 + 22301074;30032202 116899611 MODEL JAAIVD010000003;XM_032901567;XM_032901568;XM_032901569;XM_032901570 XP_032757458;XP_032757459;XP_032757460;XP_032757461 autophagy-related protein 16-1 protein-coding 625972096 LOC116907756 protein SET 8 3762739 3763864 + 22301074;30032202 116907756 MODEL JAAIVD010000027;XM_032910895 XP_032766786 protein-coding 625972101 LOC116912673 17-beta-hydroxysteroid dehydrogenase 13 11 14038732 14053747 - 30032202 116912673 MODEL JAAIVD010000006;XM_032916790 XP_032772681 protein-coding 625972112 Hoxd9 homeobox D9 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); mucinous adenocarcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 52039476 52041659 + 22301074;30032202 116900211 MODEL JAAIVD010000023;XM_032901966 XP_032757857 homeobox protein Hox-D9 protein-coding 625972118 Tmem179b transmembrane protein 179B FOUND IN nuclear speck (ortholog); nucleolus (ortholog) 2 9168856 9171212 + 116890929 MODEL JAAIVD010000001;XM_032891572 XP_032747463 protein-coding 625972127 LOC116908002 uncharacterized LOC116908002 8 113776576 113795724 + 116908002 MODEL JAAIVD010000027;XR_004388867 ncrna 625972133 Stx1b syntaxin 1B ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN calcium ion-regulated exocytosis of neurotransmitter (ortholog); negative regulation of synaptic vesicle recycling (ortholog); positive regulation of excitatory postsynaptic potential (ortholog); ASSOCIATED WITH Duchenne muscular dystrophy (ortholog); epilepsy (ortholog); Febrile Seizures (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 74081584 74097853 + 22301074;30032202 116891459 MODEL JAAIVD010000001;XM_032892539 XP_032748430 syntaxin-1B protein-coding 625972147 Fgf17 fibroblast growth factor 17 ENCODES a protein that exhibits type 1 fibroblast growth factor receptor binding (ortholog); type 2 fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH hypogonadotropic hypogonadism 20 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) 12 53711494 53716553 + 22301074;30032202 116913371 MODEL JAAIVD010000007;XM_032917540;XM_032917541 XP_032773431;XP_032773432 protein-coding 625972157 LOC116891089 uncharacterized LOC116891089 2 32142235 32145540 - 116891089 MODEL JAAIVD010000001;XR_004386815 ncrna 625972162 LOC116902881 anionic trypsin-2-like 6 99170197 99173313 - 22301074;30032202 116902881 MODEL JAAIVD010000024;XM_032905211 XP_032761102 protein-coding 625972169 Mrpl4 mitochondrial ribosomal protein L4 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 8 17265448 17271414 + 22301074;30032202 116907410 MODEL JAAIVD010000027;XM_032910368 XP_032766259 39S ribosomal protein L4, mitochondrial protein-coding 625972182 S100a4 S100 calcium binding protein A4 ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Colonic Neoplasms (ortholog); intracranial vasospasm (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 3 63011177 63013621 - 22301074;30032202 116896595 MODEL JAAIVD010000012;XM_032897836;XM_032897838 XP_032753727;XP_032753729 protein S100-A4 protein-coding 625972192 LOC116900561 olfactory receptor 4F3/4F16/4F29-like 5 90070067 90071009 - 116900561 MODEL JAAIVD010000023 pseudo 625972193 LOC116913387 non-histone chromosomal protein HMG-14-like 12 71823419 71823723 - 116913387 MODEL JAAIVD010000007 pseudo 625972194 LOC116900465 olfactory receptor 4A47-like 5 71316005 71316894 - 116900465 MODEL JAAIVD010000023 pseudo 625972195 Mcur1 mitochondrial calcium uniporter regulator 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 62549795 62565505 - 30032202 116883730 MODEL JAAIVD010000009;XM_032884964 XP_032740855 protein-coding 625972208 LOC116909311 thyroid hormone receptor-associated protein 3-like 9 21396009 21401159 - 116909311 MODEL JAAIVD010000002 pseudo 625972209 LOC116897542 small nucleolar RNA SNORA17 3 65968602 65968728 + 116897542 MODEL JAAIVD010000012;XR_004387556 snorna 625972212 Naa80 N-alpha-acetyltransferase 80, NatH catalytic subunit ENCODES a protein that exhibits acetyl-CoA binding (ortholog); N-acetyltransferase activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN actin modification (ortholog); N-terminal peptidyl-aspartic acid acetylation (ortholog); N-terminal peptidyl-glutamic acid acetylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 98898060 98901300 + 30032202 116907533 MODEL JAAIVD010000027;XM_032910550;XM_032910551 XP_032766441;XP_032766442 N-alpha-acetyltransferase 80 protein-coding 625972222 LOC116890049 translationally-controlled tumor protein-like 1 207655994 207656653 + 116890049 MODEL JAAIVD010000025;XR_004386524 pseudo 625972225 LOC116887231 uncharacterized LOC116887231 18 19835236 19838067 - 116887231 MODEL JAAIVD010000013;XR_004386205 ncrna 625972229 LOC116890564 small nucleolar RNA SNORA17 1 120943234 120943363 - 116890564 MODEL JAAIVD010000025;XR_004386734 snorna 625972232 LOC116886357 glyceraldehyde-3-phosphate dehydrogenase-like 1 14713385 14713810 + 116886357 MODEL JAAIVD010000025 pseudo 625972233 LOC116897959 40S ribosomal protein S2-like 4 45640440 45641309 - 116897959 MODEL JAAIVD010000003 pseudo 625972234 Adamts15 ADAM metallopeptidase with thrombospondin type 1 motif 15 ENCODES a protein that exhibits endopeptidase activity (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH Distal Arthrogryposis Type 12 (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 8 26613687 26638109 - 22301074;30032202 116907060 MODEL JAAIVD010000027;XM_032910017 XP_032765908 A disintegrin and metalloproteinase with thrombospondin motifs 15 protein-coding 625972246 LOC116899949 U2 spliceosomal RNA 4 106487815 106487971 + 116899949 MODEL JAAIVD010000003 pseudo 625972247 LOC116900972 uncharacterized LOC116900972 5 107799584 107833899 - 22301074;30032202 116900972 MODEL JAAIVD010000023;XM_032902602 XP_032758493 uncharacterized protein LOC116900972 protein-coding 625972258 Tifa TRAF interacting protein with forkhead associated domain INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog) 3 31544766 31554116 - 22301074;30032202 116896272 MODEL JAAIVD010000012;XM_032897351;XM_032897352;XM_032897353;XR_004387321 XP_032753242;XP_032753243;XP_032753244 TRAF-interacting protein with FHA domain-containing protein A protein-coding 625972274 Flna filamin A ENCODES a protein that exhibits actin filament binding (ortholog); DNA-binding transcription factor binding (ortholog); Fc-gamma receptor I complex binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; integrin mediated signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Aneurysm (ortholog); aortic aneurysm (ortholog); Arterial Thrombosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) X 128227804 128254382 - 30032202 116888337 MODEL JAAIVD010000014;XM_032889607 XP_032745498 filamin-A protein-coding 625972326 LOC116900406 olfactory receptor 4P4-like 5 70161525 70162466 + 22301074 116900406 MODEL JAAIVD010000023;XM_032902152 XP_032758043 protein-coding 625972329 Caprin1 cell cycle associated protein 1 ENCODES a protein that exhibits ATP binding (ortholog); molecular condensate scaffold activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); generation of neurons (ortholog); intracellular mRNA localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); cerebellar ataxia (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 5 81595899 81627574 - 30032202 116901689 MODEL JAAIVD010000023;XM_032903815 XP_032759706 caprin-1 protein-coding 625972352 LOC116913412 ubiquitin-40S ribosomal protein S27a-like 12 46549634 46550134 - 116913412 MODEL JAAIVD010000007 pseudo 625972353 LOC116887594 proteasome subunit alpha type-6-like 18 15121741 15122474 + 116887594 MODEL JAAIVD010000013 pseudo 625972354 LOC116884585 voltage-dependent anion-selective channel protein 1-like 15 14473205 14474086 - 22301074;30032202 116884585 MODEL JAAIVD010000010;XM_032885726 XP_032741617 protein-coding 625972359 Klf2 KLF transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); cellular response to endothelin (ortholog); cellular response to fluid shear stress (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); COVID-19 (ortholog); lung disease (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 13 14142957 14145368 + 30032202 116914806 MODEL JAAIVD010000008;XM_032919260 XP_032775151 Krueppel-like factor 2;Kruppel like factor 2 protein-coding 625972366 Exoc3l2 exocyst complex component 3 like 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH BRAIN MALFORMATION RENAL SYNDROME (ortholog); Meckel syndrome (ortholog) 2 171129925 171154803 - 22301074;30032202 116894494 MODEL JAAIVD010000001;XM_032896204 XP_032752095 exocyst complex component 3-like protein 2 protein-coding 625972380 LOC116908370 U1 spliceosomal RNA 8 33945551 33945692 - 116908370 MODEL JAAIVD010000027 pseudo 625972381 LOC116914025 cyclin-dependent kinase 4-like 12 33534662 33535321 - 116914025 MODEL JAAIVD010000007 pseudo 625972382 LOC116890786 achaete-scute homolog 2-like 2 6733733 6735445 + 116890786 MODEL JAAIVD010000001 pseudo 625972383 LOC116894600 vomeronasal type-2 receptor 116-like 2 181745006 181761418 + 22301074;30032202 116894600 MODEL JAAIVD010000001;XM_032896317 XP_032752208 protein-coding 625972391 LOC116899880 small nucleolar RNA SNORA17 4 160437206 160437327 + 116899880 MODEL JAAIVD010000003 pseudo 625972392 LOC116885901 uncharacterized LOC116885901 16 14815160 14818491 - 116885901 MODEL JAAIVD010000004;XR_004386047 ncrna 625972397 LOC116904123 lanosterol 14-alpha demethylase ENCODES a protein that exhibits heme binding (ortholog); sterol 14-demethylase activity (ortholog); INVOLVED IN cholesterol biosynthetic process via 24,25-dihydrolanosterol (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Antley-Bixler syndrome (ortholog); cataract (ortholog); diabetes mellitus (ortholog); FOUND IN acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog) 6 136371225 136389383 - 22301074 116904123 MODEL JAAIVD010000024;XM_032907008 XP_032762899 protein-coding 625972411 Pdss2 decaprenyl diphosphate synthase subunit 2 ENCODES a protein that exhibits all-trans-decaprenyl-diphosphate synthase activity (ortholog); all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cerebellum development (ortholog); isoprenoid biosynthetic process (ortholog); regulation of body fluid levels (ortholog); ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); heterotetrameric polyprenyl diphosphate synthase complex (ortholog); mitochondrion (ortholog) 18 42929871 43153160 + 22301074;30032202 116887016 MODEL JAAIVD010000013;XM_032888504 XP_032744395 decaprenyl-diphosphate synthase subunit 2 protein-coding 625972423 LOC116914962 TSC22 domain family protein 1-like 13 14535780 14536092 + 116914962 MODEL JAAIVD010000008 pseudo 625972424 LOC116896781 uncharacterized LOC116896781 3 80102840 80142585 - 116896781 MODEL JAAIVD010000012;XR_004387367 ncrna 625972429 LOC116910989 zinc finger protein 431-like 1 215421893 215467880 + 30032202 116910989 MODEL JAAIVD010000025;XM_032914704;XM_032914711;XM_032914723;XR_004389293 XP_032770595;XP_032770602;XP_032770614 protein-coding 625972450 LOC116907119 uncharacterized LOC116907119 8 104053040 104056730 - 116907119 MODEL JAAIVD010000027;XR_004388807 ncrna 625972454 Ndufb2 NADH:ubiquinone oxidoreductase subunit B2 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 6 100198405 100205302 - 22301074;30032202 116903925 MODEL JAAIVD010000024;XM_032906697 XP_032762588 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial protein-coding 625972462 Clns1a chloride nucleotide-sensitive channel 1A ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); lipid binding (ortholog); potassium channel activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); membrane (ortholog) 2 96022627 96044629 + 22301074;30032202 116891705 MODEL D17698;JAAIVD010000001;XM_032892969;XM_032892970 BAA04561;XP_032748860;XP_032748861 methylosome subunit pICln protein-coding 625972475 Esr2 estrogen receptor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); INVOLVED IN amygdala development (ortholog); behavioral fear response (ortholog); brain development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; tamoxifen pharmacodynamics pathway; ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); alopecia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) 7 90294602 90345780 - 22301074 116905784 MODEL JAAIVD010000026;XM_032908758;XM_032908759;XM_032908760;XM_032908761;XM_032908762 XP_032764649;XP_032764650;XP_032764651;XP_032764652;XP_032764653 estrogen receptor beta protein-coding 625972498 LOC116895694 elongation factor 1-alpha 1-like 3 206751105 206752583 + 116895694 MODEL JAAIVD010000012;XR_004387302 pseudo 625972501 Tm6sf1 transmembrane 6 superfamily member 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN lysosomal membrane (ortholog) 2 118391738 118419472 - 30032202 116891893 MODEL JAAIVD010000001;XM_032893306;XM_032893307;XM_032893308;XM_032893309 XP_032749197;XP_032749198;XP_032749199;XP_032749200 protein-coding 625972522 LOC116910321 ras-related protein Rab-11A-like 9 54636522 54643931 - 116910321 MODEL JAAIVD010000002 pseudo 625972523 Tmcc3 transmembrane and coiled-coil domain family 3 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 173687081 173757895 + 30032202 116908320 MODEL JAAIVD010000025;XM_032911612 XP_032767503 transmembrane and coiled-coil domain protein 3 protein-coding 625972531 LOC116914105 small nucleolar RNA SNORA25 12 87252715 87252843 - 116914105 MODEL JAAIVD010000007;XR_004389672 snorna 625972534 Micalcl MICAL C-terminal like 2 89077496 89116673 - 116891648 MODEL JAAIVD010000001;XM_032892889;XM_032892890 XP_032748780;XP_032748781 MICAL C-terminal-like protein protein-coding 625972551 LOC116896626 protein argonaute-3 1 31876582 31945574 + 22301074 116896626 MODEL JAAIVD010000025;XM_032897913 XP_032753804 protein-coding 625972574 Hycc1 hyccin PI4KA lipid kinase complex subunit 1 INVOLVED IN myelination (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 5 (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog); plasma membrane (ortholog) 6 153177957 153239041 - 30032202 116904196 MODEL JAAIVD010000024;XM_032907108;XM_032907109 XP_032762999;XP_032763000 Fam126a family with sequence similarity 126 member A;hyccin protein-coding 625972593 Ccm2l CCM2 like scaffold protein INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac muscle tissue growth (ortholog); negative regulation of homotypic cell-cell adhesion (ortholog) 5 132384750 132400113 + 30032202 116902134 MODEL JAAIVD010000023;XM_032904461;XM_032904462 XP_032760352;XP_032760353 cerebral cavernous malformations 2 protein-like protein-coding 625972609 LOC116906325 U6 spliceosomal RNA 7 16700445 16700550 - 116906325 MODEL JAAIVD010000026;XR_004388612 snrna 625972612 Suds3 SIN3A corepressor complex component SDS3 ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleus (ortholog) 16 36712846 36735849 + 30032202 116885301 MODEL JAAIVD010000004;XM_032886551 XP_032742442 SDS3 homolog, SIN3A corepressor complex component;sin3 histone deacetylase corepressor complex component SDS3 protein-coding 625972629 LOC116886725 small nucleolar RNA SNORA46 17 2564644 2564778 - 116886725 MODEL JAAIVD010000011;XR_004386137 snorna 625972632 Ccser1 coiled-coil serine rich protein 1 ASSOCIATED WITH alcohol dependence (ortholog); amenorrhea (ortholog); cocaine dependence (ortholog) 6 80284967 81607510 - 116903720 MODEL JAAIVD010000024;XM_032906396;XM_032906397 XP_032762287;XP_032762288 serine-rich coiled-coil domain-containing protein 1 protein-coding 625972649 LOC116885089 U6 spliceosomal RNA 15 6630860 6630962 - 116885089 MODEL JAAIVD010000010;XR_004385960 snrna 625972652 S1pr5 sphingosine-1-phosphate receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN regulation of neuron differentiation (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); systemic scleroderma (ortholog); FOUND IN presynapse (ortholog) 8 17509974 17512043 - 22301074 116907664 MODEL JAAIVD010000027;XM_032910755 XP_032766646 sphingosine 1-phosphate receptor 5 protein-coding 625972657 Vps35l VPS35 endosomal protein sorting factor like INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH Ritscher-Schinzel syndrome (ortholog); Ritscher-Schinzel Syndrome 3 (ortholog); FOUND IN endosome (ortholog) 2 82802922 82906530 - 30032202 116891605 MODEL JAAIVD010000001;XM_032892802 XP_032748693 VPS35 endosomal protein sorting factor-like protein-coding 625972692 Nsg2 neuronal vesicle trafficking associated 2 INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite (ortholog); early endosome (ortholog) 9 3867676 3933572 - 22301074;30032202 116908752 MODEL JAAIVD010000002;XM_032912104 XP_032767995 neuronal vesicle trafficking-associated protein 2 protein-coding 625972701 Nipal4 NIPA like domain containing 4 INVOLVED IN magnesium ion transport (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 6 (ortholog); erythrokeratodermia variabilis et progressiva 1 (ortholog) 9 28869441 28886569 - 22301074;30032202 116909923 MODEL JAAIVD010000002;XM_032913688 XP_032769579 magnesium transporter NIPA4 protein-coding 625972711 LOC116894289 thymosin beta-10-like 2 132443782 132443955 + 22301074;30032202 116894289 MODEL JAAIVD010000001;XM_032895996 XP_032751887 protein-coding 625972715 Ccp110 centriolar coiled-coil protein 110 INVOLVED IN centriole replication (ortholog); centrosome duplication (ortholog); ciliary basal body organization (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) 2 82909621 82933497 - 30032202 116891606 MODEL JAAIVD010000001;XM_032892803;XM_032892804;XM_032892805 XP_032748694;XP_032748695;XP_032748696 centriolar coiled-coil protein of 110 kDa protein-coding 625972741 LOC116901072 bcl-2-associated transcription factor 1-like 5 142723124 142758055 + 116901072 MODEL JAAIVD010000023 pseudo 625972742 Ten1 TEN1 subunit of CST complex ENCODES a protein that exhibits telomeric DNA binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH dyskeratosis congenita (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); nucleoplasm (ortholog) 9 67850275 67866509 - 22301074;30032202 116908523 MODEL JAAIVD010000002;XM_032911699 XP_032767590 CST complex subunit TEN1 protein-coding 625972750 LOC116903293 uncharacterized LOC116903293 6 23350549 23351845 + 116903293 MODEL JAAIVD010000024;XM_032905714 XP_032761605 uncharacterized protein LOC116903293 protein-coding 625972755 Lmod3 leiomodin 3 ENCODES a protein that exhibits actin monomer binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN actin nucleation (ortholog); positive regulation of skeletal muscle fiber development (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH genetic disease (ortholog); nemaline myopathy 10 (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); M band (ortholog) 6 49787132 49801175 + 22301074;30032202 116902712 MODEL JAAIVD010000024;XM_032905068 XP_032760959 leiomodin-3 protein-coding 625972762 Sumo2 small ubiquitin like modifier 2 ENCODES a protein that exhibits nuclear retinoid X receptor binding (ortholog); SUMO transferase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 9 68557765 68570307 + 30032202 116909329 MODEL JAAIVD010000002;XM_032912869 XP_032768760 small ubiquitin-related modifier 2 protein-coding 625972770 LOC116905265 glyceraldehyde-3-phosphate dehydrogenase-like 7 98395193 98396282 + 116905265 MODEL JAAIVD010000026 pseudo 625972771 Snrpc small nuclear ribonucleoprotein polypeptide C ENCODES a protein that exhibits protein homodimerization activity (ortholog); single-stranded RNA binding (ortholog); U1 snRNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH connective tissue disease (ortholog); mixed connective tissue disease (ortholog); systemic lupus erythematosus (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) 18 6004676 6016262 - 22301074;30032202 116887337 MODEL JAAIVD010000013;XM_032888929 XP_032744820 U1 small nuclear ribonucleoprotein C protein-coding 625972781 Il17c interleukin 17C ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN neutrophil differentiation (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN extracellular space (ortholog) 17 42061371 42062664 + 22301074 116886686 MODEL JAAIVD010000011;XM_032888179 XP_032744070 interleukin-17C protein-coding 625972787 LOC116892771 60S ribosomal protein L13-like 2 183059760 183060344 - 22301074;30032202 116892771 MODEL JAAIVD010000001;XM_032894647;XM_032894648 XP_032750538;XP_032750539 protein-coding 625972793 Oprk1 opioid receptor kappa 1 ENCODES a protein that exhibits dynorphin receptor activity (ortholog); G protein-coupled opioid receptor activity (ortholog); receptor serine/threonine kinase binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting opioid receptor signaling pathway (ortholog); behavioral response to cocaine (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN nalbuphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); Binge Drinking (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); dendrite (ortholog) 1 140878397 140894005 + 22301074;30032202 116903757 MODEL JAAIVD010000025;XM_032906449 XP_032762340 kappa-type opioid receptor protein-coding 625972801 LOC116895583 tropomyosin beta chain-like 3 142936483 142937275 - 116895583 MODEL JAAIVD010000012 pseudo 625972802 Pax3 paired box 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN cell migration (ortholog); developmental pigmentation (ortholog); heart development (ortholog); ASSOCIATED WITH alveolar rhabdomyosarcoma (ortholog); brain stem glioma (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 151317944 151412926 - 22301074;30032202 116898236 MODEL JAAIVD010000003;XM_032899588 XP_032755479 paired box protein Pax-3 protein-coding 625972814 Ift122 intraflagellar transport 122 INVOLVED IN camera-type eye morphogenesis (ortholog); cilium assembly (ortholog); dorsal/ventral neural tube patterning (ortholog); ASSOCIATED WITH Cardiac Edema (ortholog); Ciliary Motility Disorders (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog); cilium (ortholog) 6 30803368 30871733 - 22301074;30032202 116903374 MODEL JAAIVD010000024;XM_032905861;XM_032905862;XM_032905863 XP_032761752;XP_032761753;XP_032761754 intraflagellar transport protein 122 homolog protein-coding 625972853 Kif1c kinesin family member 1C INVOLVED IN anterograde neuronal dense core vesicle transport (ortholog); retrograde neuronal dense core vesicle transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN Golgi apparatus (ortholog) 9 50310674 50340545 + 22301074 116909535 MODEL JAAIVD010000002;XM_032913148;XM_032913149;XM_032913150 XP_032769039;XP_032769040;XP_032769041 kinesin-like protein KIF1C protein-coding 625972885 Ndufs1 NADH:ubiquinone oxidoreductase core subunit S1 ENCODES a protein that exhibits electron transfer activity (ortholog); NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN cellular respiration (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH cystic fibrosis (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 4 137131240 137164898 - 22301074 116899444 MODEL JAAIVD010000003;XM_032901215 XP_032757106 NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial protein-coding 625972908 Mif macrophage migration inhibitory factor ENCODES a protein that exhibits chemoattractant activity (ortholog); cytokine activity (ortholog); cytokine receptor binding (ortholog); INVOLVED IN brain renin-angiotensin system (ortholog); carboxylic acid metabolic process (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Alcoholic Liver Diseases (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 11580563 11581554 + 30032202 116886822 MODEL JAAIVD010000013;XM_032888255 XP_032744146 protein-coding 625972915 Rnf223 ring finger protein 223 1 4525682 4527399 - 30032202 116891668 MODEL JAAIVD010000025;XM_032892926 XP_032748817 protein-coding 625972920 Adgrg2 adhesion G protein-coupled receptor G2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); spermatid development (ortholog); ASSOCIATED WITH autosomal recessive congenital bilateral absence of vas deferens (ortholog); congenital bilateral absence of vas deferens (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); cytosol (ortholog); plasma membrane (ortholog) X 31783766 31847031 + 22301074;30032202 116888301 MODEL JAAIVD010000014;XM_032889575 XP_032745466 adhesion G-protein coupled receptor G2 protein-coding 625972949 LOC116911171 olfactory receptor 6C3-like 1 162080766 162085574 + 22301074;30032202 116911171 MODEL JAAIVD010000025;XM_032915073 XP_032770964 protein-coding 625972953 Tanc2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2 ENCODES a protein that exhibits structural constituent of postsynaptic density (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); in utero embryonic development (ortholog); regulation of dendritic spine development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 9 73182253 73507608 - 22301074;30032202 116910410 MODEL JAAIVD010000002;XM_032914252;XM_032914253;XM_032914254;XM_032914255;XM_032914256;XM_032914257;XM_032914258 XP_032770143;XP_032770144;XP_032770145;XP_032770146;XP_032770147;XP_032770148;XP_032770149 protein TANC2 protein-coding 625972994 LOC116887423 rano class II histocompatibility antigen, B-1 beta chain 18 7985256 7990642 - 22301074;30032202 116887423 MODEL JAAIVD010000013;XM_032889039 XP_032744930 protein-coding 625973004 Usp16 ubiquitin specific peptidase 16 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage response (ortholog); monoubiquitinated protein deubiquitination (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 56378761 56406884 - 22301074;30032202 116899028 MODEL JAAIVD010000003;XM_032900479;XM_032900481;XR_004387682 XP_032756370;XP_032756372 ubiquitin carboxyl-terminal hydrolase 16 protein-coding 625973030 LOC116895093 small nucleolar RNA U13 2 12885919 12886021 - 116895093 MODEL JAAIVD010000001;XR_004387257 snorna 625973033 Atg4c autophagy related 4C cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); protein delipidation (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Crohn's disease (ortholog); intellectual disability (ortholog) 1 55261444 55333988 - 22301074 116899877 MODEL JAAIVD010000025;XM_032901783;XM_032901784;XM_032901785;XM_032901786 XP_032757674;XP_032757675;XP_032757676;XP_032757677 cysteine protease ATG4C protein-coding 625973058 LOC116900920 Ig kappa chain V-II region 26-10-like 5 78927211 78928032 - 116900920 MODEL JAAIVD010000023 pseudo 625973059 E2f4 E2F transcription factor 4 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Lynch syndrome (ortholog); otitis media (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 17 25024047 25031485 + 22301074;30032202 116886372 MODEL JAAIVD010000011;XM_032887835;XM_032887836 XP_032743726;XP_032743727 transcription factor E2F4 protein-coding 625973077 Cars1 cysteinyl-tRNA synthetase 1 ENCODES a protein that exhibits ATP binding (ortholog); cysteine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH MICROCEPHALY, DEVELOPMENTAL DELAY, AND BRITTLE HAIR SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 6100884 6142589 + 22301074;30032202 116890830 MODEL JAAIVD010000001;XM_032891347;XM_032891348;XM_032891349 XP_032747238;XP_032747239;XP_032747240 cysteine--tRNA ligase, cytoplasmic protein-coding 625973113 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42430176 42430260 - 116884181 MODEL JAAIVD010000009 trna 625973114 Sdc1 syndecan 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast development (ortholog); positive regulation of exosomal secretion (ortholog); PARTICIPATES IN altered melanocortin system pathway; melanocortin system pathway; obesity pathway; ASSOCIATED WITH COVID-19 (ortholog); familial hyperlipidemia (ortholog); Hodgkin's lymphoma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 7 29012562 29034836 + 30032202 116906303 MODEL JAAIVD010000026;XM_032909209 XP_032765100 syndecan-1 protein-coding 625973123 LOC116895474 vomeronasal type-2 receptor 1-like 3 90877014 90907026 + 22301074;30032202 116895474 MODEL JAAIVD010000012;XM_032896734 XP_032752625 protein-coding 625973132 LOC116894571 vomeronasal type-2 receptor 116-like 2 178797871 178818654 + 22301074;30032202 116894571 MODEL JAAIVD010000001;XM_032896286;XM_032896287;XM_032896288;XM_032896289 XP_032752177;XP_032752178;XP_032752179;XP_032752180 protein-coding 625973151 LOC116906375 small nucleolar RNA SNORD113/SNORD114 family 7 127242115 127242189 + 116906375 MODEL JAAIVD010000026;XR_004388644 snorna 625973154 Hsd17b3 hydroxysteroid 17-beta dehydrogenase 3 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); testosterone dehydrogenase (NADP+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH 17-beta hydroxysteroid dehydrogenase 3 deficiency (ortholog); Alzheimer's disease (ortholog); disorder of sexual development (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 14 75463047 75493281 + 30032202 116883512 MODEL JAAIVD010000009;XM_032884683 XP_032740574 testosterone 17-beta-dehydrogenase 3 protein-coding 625973169 LOC116910349 60S ribosomal protein L6-like 9 69040213 69043296 - 116910349 MODEL JAAIVD010000002 pseudo 625973170 LOC116885226 uncharacterized LOC116885226 16 36460322 36462400 - 116885226 MODEL JAAIVD010000004;XR_004385997 ncrna 625973175 Maf MAF bZIP transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell development (ortholog); gene expression (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Ayme-Gripp syndrome (ortholog); cataract (ortholog); cataract 21 multiple types (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 17 35326762 35351336 - 30032202 116886517 MODEL JAAIVD010000011;XM_032888028 XP_032743919 transcription factor Maf protein-coding 625973182 P2ry4 pyrimidinergic receptor P2Y4 ENCODES a protein that exhibits ATP binding (ortholog); G protein-coupled UTP receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin E stimulus (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog) X 58338038 58341287 - 22301074;30032202 116889240 MODEL JAAIVD010000014;XM_032890390;XM_032890391 XP_032746281;XP_032746282 P2Y purinoceptor 4 protein-coding 625973191 Cnot3 CCR4-NOT transcription complex subunit 3 INVOLVED IN determination of left/right symmetry (ortholog); mRNA catabolic process (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN CCR4-NOT complex (ortholog); P-body (ortholog) 2 178235235 178251235 + 22301074;30032202 116892699 MODEL JAAIVD010000001;XM_032894557;XM_032894558;XM_032894559;XM_032894560 XP_032750448;XP_032750449;XP_032750450;XP_032750451 protein-coding 625973221 Efnb3 ephrin B3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN adult walking behavior (ortholog); axon choice point recognition (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH movement disease (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); plasma membrane (ortholog) 9 49165136 49170422 - 30032202 116909601 MODEL JAAIVD010000002;XM_032913224 XP_032769115 ephrin-B3 protein-coding 625973230 LOC116904482 NEDD4-binding protein 1-like 6 144415988 144417223 + 30032202 116904482 MODEL JAAIVD010000024;XM_032907284 XP_032763175 protein-coding 625973234 Fkbp6 FKBP prolyl isomerase family member 6 (inactive) ENCODES a protein that exhibits Hsp90 protein binding (ortholog); identical protein binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); piRNA processing (ortholog); positive regulation of viral genome replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 77 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 16 18661315 18732104 + 22301074 116885655 MODEL JAAIVD010000004;XM_032886958;XM_032886959 XP_032742849;XP_032742850 FKBP prolyl isomerase 6;inactive peptidyl-prolyl cis-trans isomerase FKBP6 protein-coding 625973251 Cd68 CD68 molecule INVOLVED IN autocrine signaling (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to nutrient levels (ortholog); ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adult T-cell leukemia/lymphoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN lysosome (ortholog); plasma membrane (ortholog) 9 49275365 49277810 - 22301074;30032202 116910475 MODEL JAAIVD010000002;XM_032914349;XM_032914350 XP_032770240;XP_032770241 macrosialin protein-coding 625973264 LOC116902505 small nucleolar RNA SNORA73 family 5 99579148 99579351 + 116902505 MODEL JAAIVD010000023;XR_004388115 snorna 625973267 LOC116897474 U7 small nuclear RNA 3 208316577 208316638 + 116897474 MODEL JAAIVD010000012;XR_004387500 snrna 625973270 LOC116889488 small nucleolar RNA SNORA48 X 23154876 23155019 + 116889488 MODEL JAAIVD010000014;XR_004386439 snorna 625973273 Lyn LYN proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); gamma-tubulin binding (ortholog); INVOLVED IN autophagy (ortholog); B cell homeostasis (ortholog); B cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 7 72960195 73071603 - 22301074;30032202 116905089 MODEL JAAIVD010000026;XM_032907811;XM_032907812 XP_032763702;XP_032763703 tyrosine-protein kinase Lyn protein-coding 625973294 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889724 MODEL JAAIVD010000061 trna 625973295 Sstr2 somatostatin receptor 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein heterodimerization activity (ortholog); somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to estradiol stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); Experimental Diabetes Mellitus (ortholog); neuroendocrine tumor (ortholog); FOUND IN cytosol (ortholog); G protein-coupled receptor heterodimeric complex (ortholog); membrane (ortholog) 9 75682951 75690131 - 22301074;30032202 116909177 MODEL JAAIVD010000002;XM_032912667;XM_032912668 XP_032768558;XP_032768559 somatostatin receptor type 2 protein-coding 625973307 Zbtb48 zinc finger and BTB domain containing 48 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of RNA metabolic process (ortholog); telomere maintenance via telomere lengthening (ortholog); FOUND IN chromosome, telomeric region (ortholog) 1 8713165 8721333 + 22301074;30032202 116892380 MODEL JAAIVD010000025;XM_032894047 XP_032749938 telomere zinc finger-associated protein protein-coding 625973322 LOC116912002 COP9 signalosome complex subunit 8-like 11 51014189 51014852 + 116912002 MODEL JAAIVD010000006 pseudo 625973323 St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 ENCODES a protein that exhibits N-acetyllactosaminide alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN cellular response to interleukin-6 (ortholog); glycolipid biosynthetic process (ortholog); protein glycosylation (ortholog) 4 42459534 42492143 - 22301074;30032202 116898914 MODEL JAAIVD010000003;XM_032900323 XP_032756214 type 2 lactosamine alpha-2,3-sialyltransferase protein-coding 625973337 Fcer1g Fc fragment of IgE receptor Ig ENCODES a protein that exhibits identical protein binding (ortholog); IgE binding (ortholog); IgE receptor activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH drug allergy (ortholog); Experimental Liver Cirrhosis (ortholog); Genetic Predisposition to Disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); Fc-epsilon receptor I complex (ortholog) 10 50394281 50398895 - 22301074;30032202 116911016 MODEL JAAIVD010000005;XM_032914748;XR_004389299 XP_032770639 high affinity immunoglobulin epsilon receptor subunit gamma protein-coding 625973348 LOC116886002 small nucleolar RNA SNORA51 16 9257279 9257410 + 116886002 MODEL JAAIVD010000004;XR_004386074 snorna 625973351 Spaca6 sperm acrosome associated 6 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal vesicle (ortholog); plasma membrane (ortholog) 2 100768843 100779627 - 30032202 116891789 MODEL JAAIVD010000001;XM_032893141;XR_004386860;XR_004386861 XP_032749032 sperm acrosome membrane-associated protein 6 protein-coding 625973368 Tex28 testis expressed 28 X 128143905 128164577 - 30032202 116888247 MODEL JAAIVD010000014;XM_032889533 XP_032745424 testis-specific protein TEX28 protein-coding 625973374 Mrpl22 mitochondrial ribosomal protein L22 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 40061885 40070417 - 22301074;30032202 116908668 MODEL JAAIVD010000002;XM_032911951 XP_032767842 39S ribosomal protein L22, mitochondrial protein-coding 625973385 Gpr75 G protein-coupled receptor 75 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); G protein-coupled receptor signaling pathway (ortholog) 11 98389718 98391763 + 22301074;30032202 116912638 MODEL JAAIVD010000006;XM_032916756 XP_032772647 probable G-protein coupled receptor 75 protein-coding 625973390 LOC116883397 uncharacterized LOC116883397 14 47494696 47495831 - 116883397 MODEL JAAIVD010000009;XR_004385756 ncrna 625973394 LOC116890077 olfactory receptor 2AP1 1 215231782 215232711 - 22301074;30032202 116890077 MODEL JAAIVD010000025;XM_032890840 XP_032746731 protein-coding 625973397 Atp2a3 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion transmembrane transporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport from cytosol to endoplasmic reticulum (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN endoplasmic reticulum (ortholog); organelle membrane (ortholog); sarcoplasmic reticulum (ortholog) 9 42518578 42548788 - 22301074;30032202 116908799 MODEL JAAIVD010000002;XM_032912201 XP_032768092 sarcoplasmic/endoplasmic reticulum calcium ATPase 3 protein-coding 625973422 LOC116906513 U4 spliceosomal RNA 7 51673584 51673740 + 116906513 MODEL JAAIVD010000026 pseudo 625973423 LOC116890074 olfactory receptor 9K2 1 215061473 215062447 - 22301074;30032202 116890074 MODEL JAAIVD010000025;XM_032890837 XP_032746728 protein-coding 625973427 LOC116895434 cleavage and polyadenylation specificity factor subunit 3-like 3 67598376 67600368 + 116895434 MODEL JAAIVD010000012 pseudo 625973428 Tnip1 TNFAIP3 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); leukocyte cell-cell adhesion (ortholog); MyD88-dependent toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); asthma (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 37348670 37389165 - 30032202 116908971 MODEL JAAIVD010000002;XM_032912434 XP_032768325 TNFAIP3-interacting protein 1 protein-coding 625973450 Dio3 iodothyronine deiodinase 3 ENCODES a protein that exhibits thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brown fat cell proliferation (ortholog); positive regulation of multicellular organism growth (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Breast Neoplasms (ortholog); congestive heart failure (ortholog) 7 127842023 127844080 + 22301074;30032202 116905913 MODEL JAAIVD010000026;XM_032908899 XP_032764790 thyroxine 5-deiodinase protein-coding 625973455 Ell3 elongation factor for RNA polymerase II 3 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN DNA-templated transcription elongation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN cell junction (ortholog); chromosome (ortholog); cytosol (ortholog) 5 99592097 99596088 - 22301074;30032202 116901861 MODEL JAAIVD010000023;XM_032904058;XM_032904059 XP_032759949;XP_032759950 RNA polymerase II elongation factor ELL3 protein-coding 625973473 Capn13 calpain 13 7 19844063 19916586 + 22301074;30032202 116905945 MODEL JAAIVD010000026;XM_032908939 XP_032764830 calpain-13 protein-coding 625973499 LOC116897414 U1 spliceosomal RNA 3 60952271 60952435 - 116897414 MODEL JAAIVD010000012;XR_004387456 snrna 625973502 LOC116904392 protein FAM114A2-like 6 97461442 97462916 + 116904392 MODEL JAAIVD010000024 pseudo 625973503 Mcm9 minichromosome maintenance 9 homologous recombination repair factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA helicase activity (ortholog); enzyme binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); ovarian dysgenesis 4 (ortholog); FOUND IN MCM8-MCM9 complex (ortholog); nucleus (ortholog) 18 30516090 30589821 - 22301074;30032202 116886841 MODEL JAAIVD010000013;XM_032888289 XP_032744180 DNA helicase MCM9 protein-coding 625973519 Hipk2 homeodomain interacting protein kinase 2 ENCODES a protein that exhibits DNA binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); nephrosclerosis (ortholog); ureteral obstruction (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear body (ortholog) 6 100928625 101106317 + 22301074;30032202 116903939 MODEL JAAIVD010000024;XM_032906717;XM_032906718;XM_032906719;XM_032906720 XP_032762608;XP_032762609;XP_032762610;XP_032762611 homeodomain-interacting protein kinase 2 protein-coding 625973545 LOC116900627 signal-regulatory protein beta-1-like 5 108199778 108280814 - 30032202 116900627 MODEL JAAIVD010000023;XM_032902344 XP_032758235 protein-coding 625973556 LOC116905921 uncharacterized LOC116905921 7 129936534 129937851 + 116905921 MODEL JAAIVD010000026;XR_004388578 ncrna 625973560 LOC116888075 39S ribosomal protein L15, mitochondrial-like X 90122493 90127490 + 116888075 MODEL JAAIVD010000014 pseudo 625973561 Bcar3 BCAR3 adaptor protein, NSP family member ENCODES a protein that exhibits kinase binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN endothelin receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN focal adhesion (ortholog); membrane (ortholog) 3 37310848 37355820 - 22301074;30032202 116896298 MODEL JAAIVD010000012;XM_032897385 XP_032753276 breast cancer anti-estrogen resistance protein 3 protein-coding 625973575 Ing4 inhibitor of growth family member 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Lymphatic Metastasis (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); intermediate filament cytoskeleton (ortholog) 6 22846757 22855425 - 30032202 116903264 MODEL JAAIVD010000024;XM_032905658;XM_032905659;XM_032905660 XP_032761549;XP_032761550;XP_032761551 inhibitor of growth protein 4 protein-coding 625973591 Akr1b10 aldo-keto reductase family 1 member B10 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); aldose reductase (NADPH) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); daunorubicin metabolic process (ortholog); doxorubicin metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Colorectal Neoplasms (ortholog); contact dermatitis (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 6 105304507 105316485 - 30032202 116903979 MODEL JAAIVD010000024;XM_032906787 XP_032762678 protein-coding 625973605 Pusl1 pseudouridine synthase like 1 FOUND IN mitochondrion (ortholog) 1 4739020 4743551 + 22301074;30032202 116891649 MODEL JAAIVD010000025;XM_032892895;XM_032892903;XM_032892914;XR_004386857 XP_032748786;XP_032748794;XP_032748805 tRNA pseudouridine synthase-like 1 protein-coding 625973626 LOC116902474 U6 spliceosomal RNA 5 78658481 78658583 + 116902474 MODEL JAAIVD010000023;XR_004388092 snrna 625973629 Tmem98 transmembrane protein 98 INVOLVED IN negative regulation of myelination (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Nanophthalmos 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); extracellular exosome (ortholog) 9 89618507 89629198 - 30032202 116909542 MODEL JAAIVD010000002;XM_032913158 XP_032769049 protein-coding 625973640 Dhodh dihydroorotate dehydrogenase (quinone) ENCODES a protein that exhibits dihydroorotase activity (ortholog); dihydroorotate dehydrogenase (quinone) activity (ortholog); dihydroorotate dehydrogenase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); female pregnancy (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); erythroleukemia (ortholog); Experimental Arthritis (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 17 29313558 29327396 - 22301074;30032202 116886393 MODEL JAAIVD010000011;XM_032887861 XP_032743752 dihydroorotate dehydrogenase (quinone), mitochondrial protein-coding 625973653 LOC116905699 leydig cell tumor 10 kDa protein-like 7 62379617 62379924 + 116905699 MODEL JAAIVD010000026 pseudo 625973654 LOC116904770 small nucleolar RNA SNORA17 6 42759330 42759446 + 116904770 MODEL JAAIVD010000024 pseudo 625973655 Pck2 phosphoenolpyruvate carboxykinase 2, mitochondrial ENCODES a protein that exhibits manganese ion binding (ortholog); phosphoenolpyruvate carboxykinase (GTP) activity (ortholog); phosphoenolpyruvate carboxykinase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH COVID-19 (ortholog); Endotoxemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 69459224 69468598 - 22301074;30032202 116913578 MODEL JAAIVD010000007;XM_032917797 XP_032773688 phosphoenolpyruvate carboxykinase [GTP], mitochondrial protein-coding 625973669 Lrrc20 leucine rich repeat containing 20 18 27306861 27408519 + 22301074 116887252 MODEL JAAIVD010000013;XM_032888819 XP_032744710 leucine-rich repeat-containing protein 20 protein-coding 625973678 LOC116911823 small nucleolar RNA SNORA17 10 66725275 66725407 - 116911823 MODEL JAAIVD010000005;XR_004389360 snorna 625973681 Cpb2 carboxypeptidase B2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); fibrinolysis (ortholog); liver regeneration (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amenorrhea (ortholog); Angina Pectoris (ortholog); Bacteremia (ortholog); FOUND IN extracellular space (ortholog) 12 49111148 49154142 - 22301074;30032202 116913520 MODEL JAAIVD010000007;XM_032917721;XM_032917722 XP_032773612;XP_032773613 protein-coding 625973700 Farp1 FERM, ARH/RhoGEF and pleckstrin domain protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); positive regulation of skeletal muscle acetylcholine-gated channel clustering (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); substance-related disorder (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); dendrite (ortholog) 12 3598207 3671454 - 22301074;30032202 116913134 MODEL JAAIVD010000007;XM_032917337;XM_032917338 XP_032773228;XP_032773229 FERM, ARHGEF and pleckstrin domain-containing protein 1 protein-coding 625973733 LOC116910638 U6 spliceosomal RNA 9 84333528 84333632 + 116910638 MODEL JAAIVD010000002;XR_004389176 snrna 625973736 LOC116885222 uncharacterized LOC116885222 16 40128132 40129614 - 116885222 MODEL JAAIVD010000004;XR_004385996 ncrna 625973740 LOC116889132 synaptonemal complex protein 3-like X 117042590 117056784 - 30032202 116889132 MODEL JAAIVD010000014;XM_032890303 XP_032746194 protein-coding 625973752 LOC116897497 small nucleolar RNA SNORA5 3 60582579 60582714 + 116897497 MODEL JAAIVD010000012;XR_004387518 snorna 625973755 Ik IK cytokine ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitotic cell cycle (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); mRNA splicing, via spliceosome (ortholog); FOUND IN mitotic spindle pole (ortholog); nuclear chromosome (ortholog); nuclear speck (ortholog) 15 7622976 7637903 - 30032202 116884453 MODEL JAAIVD010000010;XM_032885552 XP_032741443 protein Red protein-coding 625973779 Slain1 SLAIN motif family member 1 12 21032597 21092503 - 30032202 116913087 MODEL JAAIVD010000007;XM_032917219;XM_032917220 XP_032773110;XP_032773111 SLAIN motif-containing protein 1 protein-coding 625973792 LOC116893675 olfactory receptor 5A1-like 2 12249352 12250626 - 22301074;30032202 116893675 MODEL JAAIVD010000001;XM_032895391 XP_032751282 protein-coding 625973796 LOC116902457 olfactory receptor 1J2-like 5 13172209 13173136 - 116902457 MODEL JAAIVD010000023 pseudo 625973797 LOC116912730 mortality factor 4-like protein 1 11 79330325 79331285 - 116912730 MODEL JAAIVD010000006 pseudo 625973798 LOC116903894 basic salivary proline-rich protein 3-like 6 16097641 16100672 + 116903894 MODEL JAAIVD010000024;XM_032906655 XP_032762546 protein-coding 625973802 Orai1 ORAI calcium release-activated calcium modulator 1 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); store-operated calcium channel activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH congenital structural myopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN basolateral plasma membrane (ortholog); growth cone (ortholog); membrane (ortholog) 16 30793006 30808209 - 30032202 116885656 MODEL JAAIVD010000004;XM_032886960;XM_032886961 XP_032742851;XP_032742852 calcium release-activated calcium channel protein 1 protein-coding 625973814 Plcd1 phospholipase C delta 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); enzyme binding (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to calcium ion (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway; ASSOCIATED WITH alopecia (ortholog); Alzheimer's disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) 8 110311679 110334165 - 22301074;30032202 116907903 MODEL JAAIVD010000027;XM_032911101;XM_032911102 XP_032766992;XP_032766993 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-1 protein-coding 625973836 LOC116909403 immunity-related GTPase family M protein-like 9 40035736 40037238 - 22301074;30032202 116909403 MODEL JAAIVD010000002;XM_032912968 XP_032768859 protein-coding 625973841 LOC116902988 uncharacterized LOC116902988 6 136485065 136488603 - 116902988 MODEL JAAIVD010000024;XR_004388246 ncrna 625973846 LOC116892932 40S ribosomal protein S27-like 2 206372497 206373236 - 22301074;30032202 116892932 MODEL JAAIVD010000001;XM_032894870 XP_032750761 protein-coding 625973851 Kcns3 potassium voltage-gated channel modifier subfamily S member 3 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 7 31097039 31144334 - 22301074;30032202 116904876 MODEL JAAIVD010000026;XM_032907473;XM_032907474;XM_032907475;XM_032907476 XP_032763364;XP_032763365;XP_032763366;XP_032763367 potassium voltage-gated channel subfamily S member 3 protein-coding 625973867 Col6a2 collagen type VI alpha 2 chain ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN neuron apoptotic process (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); response to glucose (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Bethlem myopathy (ortholog); Bethlem Myopathy 1A (ortholog); Bethlem Myopathy 1B (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); protein-containing complex (ortholog) 8 106522041 106550111 + 116907851 MODEL JAAIVD010000027;XM_032911041 XP_032766932 collagen alpha-2(VI) chain protein-coding 625973899 LOC116890503 small nucleolar RNA SNORA48 1 254715122 254715259 - 116890503 MODEL JAAIVD010000025;XR_004386689 snorna 625973902 Rps27l ribosomal protein S27 like ENCODES a protein that exhibits translation activator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleus (ortholog) 8 61305467 61308963 + 22301074;30032202;8441676 116907713 MODEL JAAIVD010000027;X59375;XM_032910839 CAA42019;XP_032766730 40S ribosomal protein S27-like protein-coding 625973910 Fshr follicle stimulating hormone receptor ENCODES a protein that exhibits follicle-stimulating hormone receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); amenorrhea (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog); endosome (ortholog); membrane (ortholog) 7 3624717 3809156 + 22301074;30032202 116905657 MODEL JAAIVD010000026;XM_032908629;XM_032908630 XP_032764520;XP_032764521 follicle-stimulating hormone receptor protein-coding 625973927 Gucd1 guanylyl cyclase domain containing 1 INVOLVED IN liver regeneration (ortholog); response to cAMP (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 18 11930018 11940245 + 116887007 MODEL JAAIVD010000013;XM_032888491;XM_032888492 XP_032744382;XP_032744383 protein GUCD1 protein-coding 625973942 LOC116889089 serine/threonine-protein phosphatase PP1-gamma catalytic subunit-like X 99305315 99306560 - 116889089 MODEL JAAIVD010000014 pseudo 625973943 Zbtb7b zinc finger and BTB domain containing 7B ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); lactation (ortholog); negative regulation of CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 64273353 64289201 + 22301074;30032202 116896645 MODEL JAAIVD010000012;XM_032897966;XM_032897967;XM_032897968;XM_032897970 XP_032753857;XP_032753858;XP_032753859;XP_032753861 zinc finger and BTB domain-containing protein 7B protein-coding 625973960 Kctd13 potassium channel tetramerization domain containing 13 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of Rho protein signal transduction (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 5 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 74947439 74965251 - 22301074;30032202 116891497 MODEL JAAIVD010000001;XM_032892608 XP_032748499 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 protein-coding 625973970 LOC116908159 glutathione S-transferase P-like 8 39833927 39834555 + 116908159 MODEL JAAIVD010000027 pseudo 625973971 LOC116900060 acyl-CoA-binding protein-like 5 6443428 6443915 + 22301074;30032202 116900060 MODEL JAAIVD010000023;XM_032901852 XP_032757743 protein-coding 625973976 Wdr64 WD repeat domain 64 10 54222742 54338900 + 22301074 116911383 MODEL JAAIVD010000005;XM_032915334 XP_032771225 WD repeat-containing protein 64 protein-coding 625974007 Abhd17a abhydrolase domain containing 17A, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); negative regulation of protein localization to microtubule (ortholog); NLRP3 inflammasome complex assembly (ortholog); FOUND IN endosome membrane (ortholog); glutamatergic synapse (ortholog); nuclear speck (ortholog) 1 154295704 154302137 + 30032202 116905023 MODEL JAAIVD010000025;XM_032907706 XP_032763597 alpha/beta hydrolase domain-containing protein 17A protein-coding 625974016 Prr19 proline rich 19 FOUND IN chromosome (ortholog); nucleus (ortholog) 2 169411318 169414134 - 116894478 MODEL JAAIVD010000001;XM_032896188;XM_032896189 XP_032752079;XP_032752080 proline-rich protein 19 protein-coding 625974026 C2H11orf86 chromosome 2 C11orf86 homolog 2 3155474 3157375 + 116890768 MODEL JAAIVD010000001;XM_032891233;XM_032891234 XP_032747124;XP_032747125 uncharacterized protein C11orf86 homolog protein-coding 625974036 LOC116890420 U7 small nuclear RNA 1 245514851 245514916 - 116890420 MODEL JAAIVD010000025 pseudo 625974037 Nmu neuromedin U ENCODES a protein that exhibits neuromedin U receptor binding (ortholog); type 1 neuromedin U receptor binding (ortholog); type 2 neuromedin U receptor binding (ortholog); INVOLVED IN eating behavior (ortholog); energy homeostasis (ortholog); gastric acid secretion (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN terminal bouton (ortholog) 11 33074495 33099367 - 22301074;30032202 116911970 MODEL JAAIVD010000006;XM_032915889 XP_032771780 neuromedin-U protein-coding 625974048 Marchf4 membrane associated ring-CH-type finger 4 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); ASSOCIATED WITH frontotemporal dementia (ortholog); FOUND IN Golgi stack (ortholog); trans-Golgi network (ortholog) 4 146021830 146133128 - 22301074;30032202 116899484 MODEL JAAIVD010000003;XM_032901318 XP_032757209 E3 ubiquitin-protein ligase MARCH4 protein-coding 625974056 Zfp90 ZFP90 zinc finger protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 17 26165478 26167903 + 30032202 116886410 MODEL JAAIVD010000011;XM_032887885 XP_032743776 zinc finger protein 90 homolog protein-coding 625974061 LOC116908939 proton-coupled amino acid transporter 1 9 37628173 37658295 + 30032202 116908939 MODEL JAAIVD010000002;XM_032912397 XP_032768288 protein-coding 625974076 LOC116908657 periphilin-1-like 9 8738282 8744874 + 30032202 116908657 MODEL JAAIVD010000002;XM_032911932;XM_032911933 XP_032767823;XP_032767824 protein-coding 625974085 Slc25a40 solute carrier family 25 member 40 ENCODES a protein that exhibits glutathione transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte development (ortholog); FOUND IN mitochondrion (ortholog) 6 140323578 140367277 + 30032202 116904142 MODEL JAAIVD010000024;XM_032907032;XM_032907033;XM_032907034 XP_032762923;XP_032762924;XP_032762925 protein-coding 625974107 Vpreb3 V-set pre-B cell surrogate light chain 3 18 11499559 11500957 - 30032202 116887214 MODEL JAAIVD010000013;XM_032888776 XP_032744667 pre-B lymphocyte protein 3 protein-coding 625974112 LOC116911309 60S ribosomal protein L37-like 10 84832891 84833196 - 22301074;30032202 116911309 MODEL JAAIVD010000005;XM_032915224 XP_032771115 protein-coding 625974116 Trip10 thyroid hormone receptor interactor 10 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Huntington's disease (ortholog); FOUND IN nucleoplasm (ortholog) 4 88654908 88669109 + 22301074 116899218 MODEL JAAIVD010000003;XM_032900813;XM_032900814 XP_032756704;XP_032756705 cdc42-interacting protein 4 protein-coding 625974140 Ikbkb inhibitor of nuclear factor kappa B kinase subunit beta ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); IkappaB kinase activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN adenosine signaling pathway; FasL mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); breast cancer (ortholog); Choroidal Neovascularization (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 13 63723847 63773590 + 22301074;30032202 116914376 MODEL JAAIVD010000008;XM_032918578;XM_032918579 XP_032774469;XP_032774470 inhibitor of nuclear factor kappa-B kinase subunit beta protein-coding 625974169 Ppp1r13l protein phosphatase 1 regulatory subunit 13 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac right ventricle morphogenesis (ortholog); embryonic camera-type eye development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH ARRHYTHMOGENIC CARDIOMYOPATHY WITH VARIABLE ECTODERMAL ABNORMALITIES (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive disease (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 2 171241108 171261481 - 30032202 116892534 MODEL JAAIVD010000001;XM_032894294;XM_032894295 XP_032750185;XP_032750186 relA-associated inhibitor protein-coding 625974190 LOC116889281 peptidyl-prolyl cis-trans isomerase D-like X 62901698 62902811 - 116889281 MODEL JAAIVD010000014 pseudo 625974191 Ralyl RALY RNA binding protein like ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 3 147299387 147979976 + 22301074;30032202 116897043 MODEL JAAIVD010000012;XM_032898664 XP_032754555 RNA-binding Raly-like protein protein-coding 625974203 Unc119b unc-119 lipid binding chaperone B ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN cilium assembly (ortholog); lipoprotein transport (ortholog); FOUND IN ciliary transition zone (ortholog) 16 38690044 38699661 + 30032202 116885645 MODEL JAAIVD010000004;XM_032886953 XP_032742844 protein unc-119 homolog B protein-coding 625974212 Slc25a14 solute carrier family 25 member 14 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); protein homodimerization activity (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); regulation of cellular response to oxidative stress (ortholog); FOUND IN mitochondrial envelope (ortholog); mitochondrion (ortholog) X 109642871 109683211 - 22301074 116888370 MODEL JAAIVD010000014;XM_032889639;XM_032889640;XM_032889641;XM_032889642;XM_032889643;XM_032889644;XM_032889645;XM_032889646 XP_032745530;XP_032745531;XP_032745532;XP_032745533;XP_032745534;XP_032745535;XP_032745536;XP_032745537 brain mitochondrial carrier protein 1 protein-coding 625974246 LOC116903108 uncharacterized LOC116903108 6 6006986 6042230 - 116903108 MODEL JAAIVD010000024;XR_004388250 ncrna 625974250 Asb6 ankyrin repeat and SOCS box containing 6 5 4793332 4797970 + 22301074;30032202 116901174 MODEL JAAIVD010000023;XM_032902834;XM_032902835 XP_032758725;XP_032758726 ankyrin repeat and SOCS box protein 6 protein-coding 625974263 LOC116886788 U6 spliceosomal RNA 17 24890172 24890265 + 116886788 MODEL JAAIVD010000011 pseudo 625974264 LOC116889144 developmental pluripotency-associated protein 4-like X 57772459 57773163 - 116889144 MODEL JAAIVD010000014 pseudo 625974265 LOC116907198 galectin-8-like 8 3912996 3924913 - 116907198 MODEL JAAIVD010000027 pseudo 625974266 LOC116906420 U1 spliceosomal RNA 7 68109878 68110041 - 116906420 MODEL JAAIVD010000026;XR_004388682 snrna 625974269 Spata4 spermatogenesis associated 4 FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 33828315 33837673 + 30032202 116914729 MODEL JAAIVD010000008;XM_032919162 XP_032775053 spermatogenesis-associated protein 4 protein-coding 625974278 LOC116894140 olfactory receptor 56A4-like 2 104054814 104055770 - 22301074 116894140 MODEL JAAIVD010000001;XM_032895858 XP_032751749 protein-coding 625974281 LOC116904886 ferritin light chain 1-like 7 33316192 33316971 + 116904886 MODEL JAAIVD010000026 pseudo 625974282 LOC116885577 uncharacterized LOC116885577 16 41585849 41587787 + 116885577 MODEL JAAIVD010000004;XR_004386024 ncrna 625974288 Nr4a3 nuclear receptor subfamily 4 group A member 3 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adult behavior (ortholog); animal organ regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH extraskeletal myxoid chondrosarcoma (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog); FOUND IN transcription regulator complex (ortholog) 1 101130273 101171318 + 22301074;30032202 116902004 MODEL JAAIVD010000025;XM_032904273;XM_032904281;XM_032904289 XP_032760164;XP_032760172;XP_032760180 protein-coding 625974308 Coxfa4 cytochrome c oxidase associated subunit FA4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 21 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 6 126886617 126893618 + 116904074 MODEL JAAIVD010000024;XM_032906938 XP_032762829 Ndufa4 NDUFA4 mitochondrial complex associated;cytochrome c oxidase subunit NDUFA4 protein-coding 625974316 Smad2 SMAD family member 2 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; ASSOCIATED WITH acromicric dysplasia (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); cytoplasm (ortholog) 15 55673845 55736167 - 22301074;30032202 116885018 MODEL JAAIVD010000010;XM_032886258;XM_032886259;XM_032886260;XM_032886261 XP_032742149;XP_032742150;XP_032742151;XP_032742152 mothers against decapentaplegic homolog 2 protein-coding 625974341 Wdr4 WDR4 tRNA N7-guanosine methyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN tRNA (guanine-N7)-methylation (ortholog); tRNA modification (ortholog); tRNA stabilization (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 6 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 2352632 2368838 + 22301074;30032202 116887568 MODEL JAAIVD010000013;XM_032889188 XP_032745079 WD repeat domain 4;tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit WDR4 protein-coding 625974355 LOC116904319 argininosuccinate synthase-like 6 60825252 60826451 + 116904319 MODEL JAAIVD010000024 pseudo 625974356 LOC116902751 nucleoporin SEH1-like 6 6724491 6727482 + 116902751 MODEL JAAIVD010000024 pseudo 625974357 LOC116889729 energy-coupling factor transporter ATP-binding protein EcfA1-like 22301074;30032202 116889729 MODEL JAAIVD010000065;XM_032890604 XP_032746495 protein-coding 625974358 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60801337 60801408 + 116897697 MODEL JAAIVD010000012 trna 625974359 LOC116889544 small nucleolar RNA SNORA11 X 12166588 12166707 - 116889544 MODEL JAAIVD010000014;XR_004386479 snorna 625974362 LOC116893761 prohibitin-like 2 29404366 29406224 + 116893761 MODEL JAAIVD010000001 pseudo 625974363 Rims4 regulating synaptic membrane exocytosis 4 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN regulation of membrane potential (ortholog); regulation of synapse organization (ortholog); regulation of synaptic vesicle exocytosis (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog); synaptic membrane (ortholog) 5 154057495 154117237 + 30032202 116902372 MODEL JAAIVD010000023;XM_032904868;XM_032904869 XP_032760759;XP_032760760 regulating synaptic membrane exocytosis protein 4 protein-coding 625974375 LOC116906345 U7 small nuclear RNA 7 37822918 37822982 + 116906345 MODEL JAAIVD010000026;XR_004388625 snrna 625974378 Tcf3 transcription factor 3 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell lineage commitment (ortholog); cell development (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); agammaglobulinemia (ortholog); Agammaglobulinemia 8 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 154448448 154472581 + 22301074;30032202 116905048 MODEL JAAIVD010000025;XM_032907740;XM_032907749;XM_032907756;XM_032907766;XM_032907773 XP_032763631;XP_032763640;XP_032763647;XP_032763657;XP_032763664 transcription factor E2-alpha protein-coding 625974410 Igsf9b immunoglobulin superfamily member 9B ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); positive regulation of inhibitory postsynaptic potential (ortholog); synaptic membrane adhesion (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); inhibitory synapse (ortholog) 8 23190907 23237374 + 22301074;30032202 116906657 MODEL JAAIVD010000027;XM_032909441;XM_032909442 XP_032765332;XP_032765333 protein turtle homolog B protein-coding 625974436 Scara5 scavenger receptor class A member 5 ENCODES a protein that exhibits ferritin receptor activity (ortholog); INVOLVED IN cellular response to heat (ortholog); endocytosis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 12 58686988 58783442 - 22301074 116913487 MODEL JAAIVD010000007;XM_032917687 XP_032773578 protein-coding 625974449 LOC116894390 pregnancy-specific glycoprotein 22-like 2 157084728 157099547 + 30032202 116894390 MODEL JAAIVD010000001;XM_032896097 XP_032751988 protein-coding 625974458 Irag1 inositol 1,4,5-triphosphate receptor associated 1 INVOLVED IN cGMP-mediated signaling (ortholog); negative regulation of smooth muscle contraction (ortholog); relaxation of vascular associated smooth muscle (ortholog) 2 90471437 90585299 + 30032202 116891655 MODEL JAAIVD010000001;XM_032892900;XM_032892901;XM_032892902 XP_032748791;XP_032748792;XP_032748793 protein MRVI1 protein-coding 625974489 Dot1l DOT1 like histone lysine methyltransferase ENCODES a protein that exhibits histone H3K79 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); nucleic acid binding (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acute biphenotypic leukemia (ortholog); Colorectal Neoplasms (ortholog); Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 154089673 154127485 - 22301074;30032202 116904902 MODEL JAAIVD010000025;XM_032907512;XM_032907520;XM_032907525 XP_032763403;XP_032763411;XP_032763416 histone-lysine N-methyltransferase, H3 lysine-79 specific protein-coding 625974531 LOC116900778 UMP-CMP kinase-like 5 153344453 153345163 + 116900778 MODEL JAAIVD010000023 pseudo 625974532 Adam29 ADAM metallopeptidase domain 29 INVOLVED IN cellular homeostasis (ortholog); energy homeostasis (ortholog); gene expression (ortholog); FOUND IN external side of plasma membrane (ortholog); sperm head plasma membrane (ortholog) 13 34054048 34056390 + 22301074;30032202 116915013 MODEL JAAIVD010000008;XM_032919416 XP_032775307 disintegrin and metalloproteinase domain-containing protein 29 protein-coding 625974535 Fbxo3 F-box protein 3 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN response to lipopolysaccharide (ortholog); SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 81847214 81878156 + 22301074 116901693 MODEL JAAIVD010000023;XM_032903820;XM_032903821;XM_032903822 XP_032759711;XP_032759712;XP_032759713 F-box only protein 3 protein-coding 625974556 Mlana melan-A ASSOCIATED WITH contact dermatitis (ortholog); malignant mesothelioma (ortholog); melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); melanosome (ortholog) 2 29792885 29806746 + 22301074;30032202 116893766 MODEL JAAIVD010000001;XM_032895468 XP_032751359 melanoma antigen recognized by T-cells 1 protein-coding 625974565 Parp11 poly(ADP-ribose) polymerase family member 11 ENCODES a protein that exhibits NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN nuclear envelope organization (ortholog); protein auto-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN cytosol (ortholog); nuclear body (ortholog); nuclear envelope (ortholog) 6 20409954 20447186 - 22301074 116903234 MODEL JAAIVD010000024;XM_032905610;XM_032905611;XM_032905613 XP_032761501;XP_032761502;XP_032761504 protein mono-ADP-ribosyltransferase PARP11 protein-coding 625974583 Fitm1 fat storage inducing transmembrane protein 1 ENCODES a protein that exhibits diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 12 69432855 69434127 - 22301074;30032202 116913829 MODEL JAAIVD010000007;XM_032918141 XP_032774032 fat storage-inducing transmembrane protein 1 protein-coding 625974589 Ptpn14 protein tyrosine phosphatase non-receptor type 14 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN lymphangiogenesis (ortholog); negative regulation of cell population proliferation (ortholog); regulation of protein export from nucleus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Choanal Atresia and Lymphedema (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 67797609 67942067 + 22301074;30032202 116911666 MODEL JAAIVD010000005;XM_032915621 XP_032771512 tyrosine-protein phosphatase non-receptor type 14 protein-coding 625974612 Erlin1 ER lipid raft associated 1 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 62 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); protein-containing complex (ortholog) 2 43566615 43601897 - 22301074;30032202 116891205 MODEL JAAIVD010000001;XM_032892032 XP_032747923 erlin-1 protein-coding 625974628 LOC116910955 high mobility group protein B1-like 10 82834926 82839268 - 116910955 MODEL JAAIVD010000005 pseudo 625974629 LOC116884103 U2 spliceosomal RNA 14 61901301 61901449 + 116884103 MODEL JAAIVD010000009 pseudo 625974630 LOC116896475 zinc finger MYM-type protein 1-like 1 31219976 31236686 + 22301074 116896475 MODEL JAAIVD010000025;XM_032897643;XM_032897651;XM_032897660;XM_032897668 XP_032753534;XP_032753542;XP_032753551;XP_032753559 protein-coding 625974649 Tmem132e transmembrane protein 132E INVOLVED IN posterior lateral line neuromast hair cell development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 99 (ortholog); Breast Cancer, Familial (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cell body (ortholog) 9 88060998 88116320 - 116910386 MODEL JAAIVD010000002;XM_032914230 XP_032770121 protein-coding 625974662 LOC116905766 dehydrogenase/reductase SDR family member 7-like 7 86848592 86869412 - 116905766 MODEL JAAIVD010000026;XM_032908733 XP_032764624 protein-coding 625974670 Znf629 zinc finger protein 629 2 74284575 74293363 + 30032202 116891464 MODEL JAAIVD010000001;XM_032892553;XM_032892554 XP_032748444;XP_032748445 protein-coding 625974682 LOC116896072 discoidin, CUB and LCCL domain-containing protein 1-like 3 210529978 210568971 + 116896072 MODEL JAAIVD010000012 pseudo 625974683 LOC116910973 uncharacterized LOC116910973 10 88838756 88839378 - 116910973 MODEL JAAIVD010000005 pseudo 625974684 LOC116906184 DNA polymerase alpha catalytic subunit-like 7 113028470 113211031 + 30032202 116906184 MODEL JAAIVD010000026;XM_032909150 XP_032765041 protein-coding 625974699 Prox2 prospero homeobox 2 7 99196136 99205324 - 30032202 116905286 MODEL JAAIVD010000026;XM_032908147 XP_032764038 prospero homeobox protein 2 protein-coding 625974706 LOC116884424 40S ribosomal protein S3a-like 15 79196328 79200709 - 116884424 MODEL JAAIVD010000010 pseudo 625974707 LOC116892208 uncharacterized LOC116892208 2 155048293 155049000 - 116892208 MODEL JAAIVD010000001;XR_004386926 ncrna 625974711 C2H19orf47 chromosome 2 C19orf47 homolog FOUND IN nucleoplasm (ortholog) 2 168366034 168387479 - 30032202 116892422 MODEL JAAIVD010000001;XM_032894104;XM_032894105 XP_032749995;XP_032749996 uncharacterized protein C19orf47 homolog protein-coding 625974728 LOC116894879 U6 spliceosomal RNA 2 221384443 221384549 + 116894879 MODEL JAAIVD010000001;XR_004387090 snrna 625974731 LOC116888944 60S ribosomal protein L7-like X 3013099 3013621 + 116888944 MODEL JAAIVD010000014 pseudo 625974732 Cacna1i calcium voltage-gated channel subunit alpha1 I ENCODES a protein that exhibits low voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transport (ortholog); calcium ion transport into cytosol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); hydrocephalus (ortholog); Hyperalgesia (ortholog) 1 250055465 250165515 + 22301074;30032202 116913793 MODEL JAAIVD010000025;XM_032918103 XP_032773994 voltage-dependent T-type calcium channel subunit alpha-1I protein-coding 625974773 Znf883 zinc finger protein 883 1 91428369 91431694 - 30032202 116901455 MODEL JAAIVD010000025;XM_032903401 XP_032759292 protein-coding 625974778 LOC116893870 X-linked lymphocyte-regulated protein 3A-like 2 63051616 63061706 + 30032202 116893870 MODEL JAAIVD010000001;XM_032895594 XP_032751485 protein-coding 625974789 Syne4 spectrin repeat containing nuclear envelope family member 4 INVOLVED IN establishment of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 76 (ortholog); nonsyndromic deafness (ortholog); FOUND IN nuclear outer membrane (ortholog) 2 165687924 165692852 - 30032202 116892323 MODEL JAAIVD010000001;XM_032893947;XM_032893948;XM_032893949 XP_032749838;XP_032749839;XP_032749840 nesprin-4 protein-coding 625974805 LOC116904705 small nucleolar RNA SNORA17 6 53626307 53626439 + 116904705 MODEL JAAIVD010000024;XR_004388400 snorna 625974808 LOC116913641 non-histone chromosomal protein HMG-17-like 12 26585102 26585363 - 116913641 MODEL JAAIVD010000007 pseudo 625974809 Rai14 retinoic acid induced 14 FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 3 170025696 170160520 + 30032202 116897124 MODEL JAAIVD010000012;XM_032898780 XP_032754671 ankycorbin protein-coding 625974830 Rbp3 retinol binding protein 3 ENCODES a protein that exhibits retinol binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH autoimmune disease (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cone matrix sheath (ortholog); extracellular space (ortholog); interphotoreceptor matrix (ortholog) 13 9723908 9733055 + 22301074;7916695 116914662 MODEL AB211044;AM408328;HM217603;HM217604;HM217605;HM217606;HM217744;HM217745;HM217746;HM217747;HM217748;HM217750;HM217751;HM217753;HM217754;JAAIVD010000008;JX457660;X69523;XM_032919064 ADJ19154;ADJ19155;ADJ19156;ADJ19157;ADJ19158;ADJ19160;ADJ19161;ADJ19163;ADJ19164;ADJ39577;ADJ39578;ADJ39579;ADJ39580;AGB51534;BAE46536;CAL64035;XP_032774955 IRBP interphotoreceptor retinoid binding protein;retinol-binding protein 3 protein-coding 625974838 Dock6 dedicator of cytokinesis 6 ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 8 18066408 18118195 - 30032202 116906819 MODEL JAAIVD010000027;XM_032909699;XM_032909700;XM_032909701;XM_032909702 XP_032765590;XP_032765591;XP_032765592;XP_032765593 dedicator of cytokinesis protein 6 protein-coding 625974896 LOC116895249 olfactory receptor 8D1-like 3 83035 83991 - 116895249 MODEL JAAIVD010000012 pseudo 625974897 Cnot11 CCR4-NOT transcription complex subunit 11 FOUND IN CCR4-NOT complex (ortholog) 4 115776587 115786530 + 22301074;30032202 116899318 MODEL JAAIVD010000003;XM_032900986 XP_032756877 protein-coding 625974908 Znf444 zinc finger protein 444 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 179939068 179957758 - 30032202 116892725 MODEL JAAIVD010000001;XM_032894595;XM_032894596;XM_032894597;XM_032894599 XP_032750486;XP_032750487;XP_032750488;XP_032750490 protein-coding 625974925 Zbtb17 zinc finger and BTB domain containing 17 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN ectoderm development (ortholog); G1 to G0 transition (ortholog); gastrulation with mouth forming second (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 1 16679010 16699799 - 22301074;30032202 116893350 MODEL JAAIVD010000025;XM_032895158 XP_032751049 zinc finger and BTB domain-containing protein 17 protein-coding 625974945 LOC116904821 U6 spliceosomal RNA 6 33470134 33470240 - 116904821 MODEL JAAIVD010000024;XR_004388472 snrna 625974948 LOC116888176 heat shock protein HSP 90-beta-like X 117855257 117857338 + 116888176 MODEL JAAIVD010000014 pseudo 625974949 Armcx3 armadillo repeat containing X-linked 3 INVOLVED IN axonal transport of mitochondrion (ortholog); intracellular protein localization (ortholog); mitochondrion organization (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 87055254 87060140 + 22301074;30032202 116888530 MODEL JAAIVD010000014;XM_032889827 XP_032745718 armadillo repeat-containing X-linked protein 3 protein-coding 625974958 LOC116884512 mesoderm induction early response protein 3-like 15 71707685 71709407 + 116884512 MODEL JAAIVD010000010 pseudo 625974959 LOC116897463 U7 small nuclear RNA 3 80232953 80233019 + 116897463 MODEL JAAIVD010000012 pseudo 625974960 Npm1 nucleophosmin 1 ENCODES a protein that exhibits ATP binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 5980484 5990573 - 30032202 116909134 MODEL JAAIVD010000002;XM_032912618 XP_032768509 nucleophosmin protein-coding 625974975 LOC116913637 septin-2-like 12 55723860 55724990 + 116913637 MODEL JAAIVD010000007 pseudo 625974976 Pou3f2 POU class 3 homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); cerebral cortex radially oriented cell migration (ortholog); epidermis development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 1 120849091 120850789 + 22301074;30032202 116902824 MODEL JAAIVD010000025;XM_032905157 XP_032761048 POU domain, class 3, transcription factor 2 protein-coding 625974981 LOC116902557 small nucleolar RNA SNORA48 5 128370841 128370988 - 116902557 MODEL JAAIVD010000023;XR_004388156 snorna 625974984 LOC116913012 U6atac minor spliceosomal RNA 11 5151429 5151543 + 116913012 MODEL JAAIVD010000006 pseudo 625974985 LOC116904317 syntenin-1-like 6 60401335 60406803 + 116904317 MODEL JAAIVD010000024 pseudo 625974986 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 6067633 6067701 - 116895136 MODEL JAAIVD010000001 trna 625974987 Slc35e1 solute carrier family 35 member E1 FOUND IN Golgi apparatus (ortholog) 13 14298552 14311453 - 30032202 116915084 MODEL JAAIVD010000008;XM_032919508;XM_032919509 XP_032775399;XP_032775400 protein-coding 625974998 Syndig1 synapse differentiation inducing 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of synapse assembly (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN cell body (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 5 129338338 129506170 + 30032202 116902082 MODEL JAAIVD010000023;XM_032904372;XM_032904374;XM_032904375;XM_032904376;XM_032904377;XM_032904378;XM_032904379;XM_032904380;XM_032904381 XP_032760263;XP_032760265;XP_032760266;XP_032760267;XP_032760268;XP_032760269;XP_032760270;XP_032760271;XP_032760272 synapse differentiation-inducing gene protein 1 protein-coding 625975028 Guca1a guanylate cyclase activator 1A ENCODES a protein that exhibits calcium sensitive guanylate cyclase activator activity (ortholog); guanylate cyclase regulator activity (ortholog); INVOLVED IN phototransduction (ortholog); positive regulation of cGMP-mediated signaling (ortholog); positive regulation of guanylate cyclase activity (ortholog); ASSOCIATED WITH cone-rod dystrophy 14 (ortholog); retinitis pigmentosa (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 4 82476542 82486204 + 22301074;30032202 116898041 MODEL JAAIVD010000003;XM_032899433 XP_032755324 guanylyl cyclase-activating protein 1 protein-coding 625975036 Bclaf3 BCLAF1 and THRAP3 family member 3 X 33261598 33318446 - 30032202 116888396 MODEL JAAIVD010000014;XM_032889670;XM_032889671;XM_032889672;XM_032889673 XP_032745561;XP_032745562;XP_032745563;XP_032745564 protein-coding 625975059 Pigm phosphatidylinositol glycan anchor biosynthesis class M ENCODES a protein that exhibits dol-P-Man:GlcN-acyl-PI alpha-1,4-mannosyltransferase activity (ortholog); mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 1 (ortholog); Venous Thrombosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-mannosyltransferase I complex (ortholog) 10 51490760 51494205 + 22301074;30032202 116911210 MODEL JAAIVD010000005;XM_032915087 XP_032770978 GPI mannosyltransferase 1 protein-coding 625975064 Cdk2ap1 cyclin dependent kinase 2 associated protein 1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); INVOLVED IN face morphogenesis (ortholog); in utero embryonic development (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 29519103 29528039 + 30032202 116885500 MODEL JAAIVD010000004;XM_032886792;XM_032886793 XP_032742683;XP_032742684 cyclin-dependent kinase 2-associated protein 1 protein-coding 625975075 LOC116887868 proteasome subunit beta type-3-like X 47075414 47076025 - 116887868 MODEL JAAIVD010000014 pseudo 625975076 Meltf melanotransferrin ENCODES a protein that exhibits iron ion binding (ortholog); INVOLVED IN iron ion transport (ortholog); negative regulation of substrate adhesion-dependent cell spreading (ortholog); positive regulation of extracellular matrix disassembly (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 4 16719084 16737642 + 22301074;30032202 116898758 MODEL JAAIVD010000003;XM_032900078 XP_032755969 protein-coding 625975095 LOC116910941 zinc finger protein 883-like 10 75754791 75776326 + 116910941 MODEL JAAIVD010000005 pseudo 625975096 Itfg1 integrin alpha FG-GAP repeat containing 1 17 13191388 13263308 - 30032202 116886612 MODEL JAAIVD010000011;XM_032888122 XP_032744013 T-cell immunomodulatory protein protein-coding 625975109 LOC116900716 BPI fold-containing family A member 2-like 5 133377180 133385758 + 22301074 116900716 MODEL JAAIVD010000023;XM_032902421 XP_032758312 protein-coding 625975121 LOC116914106 small nucleolar RNA SNORA42/SNORA80 family 12 62811944 62812073 + 116914106 MODEL JAAIVD010000007;XR_004389673 snorna 625975124 Clk1 CDC like kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH influenza (ortholog); FOUND IN nucleus (ortholog) 4 133979656 133991359 + 22301074;30032202 116899430 MODEL JAAIVD010000003;XM_032901183;XM_032901184 XP_032757074;XP_032757075 dual specificity protein kinase CLK1 protein-coding 625975146 Sall3 spalt like transcription factor 3 INVOLVED IN forelimb morphogenesis (ortholog); hindlimb morphogenesis (ortholog); negative regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Craniofacial Abnormalities (ortholog); gastrointestinal stromal tumor (ortholog) 15 51252054 51269047 + 30032202 116884766 MODEL JAAIVD010000010;XM_032885983;XM_032885984 XP_032741874;XP_032741875 sal-like protein 3 protein-coding 625975155 LOC116904751 small nucleolar RNA SNORA17 6 61085464 61085587 + 116904751 MODEL JAAIVD010000024 pseudo 625975156 Arhgap32 Rho GTPase activating protein 32 INVOLVED IN cerebellum development (ortholog); positive regulation of axon extension (ortholog); positive regulation of neuron migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ependymomas (ortholog); FOUND IN actin cytoskeleton (ortholog); cell cortex (ortholog); fibrillar center (ortholog) 8 27709299 27961852 + 22301074;30032202 116906606 MODEL JAAIVD010000027;XM_032909357;XM_032909358;XM_032909360;XM_032909361;XM_032909362;XM_032909363;XM_032909364 XP_032765248;XP_032765249;XP_032765251;XP_032765252;XP_032765253;XP_032765254;XP_032765255 rho GTPase-activating protein 32 protein-coding 625975199 LOC116894881 U6 spliceosomal RNA 2 75355292 75355398 + 116894881 MODEL JAAIVD010000001;XR_004387092 snrna 625975202 LOC116914986 U1 small nuclear ribonucleoprotein C-like 13 24675256 24676796 - 22301074;30032202 116914986 MODEL JAAIVD010000008;XM_032919386 XP_032775277 protein-coding 625975206 Odad3 outer dynein arm docking complex subunit 3 INVOLVED IN brain development (ortholog); cell morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) 8 18239611 18252948 - 30032202 116908073 MODEL JAAIVD010000027;XM_032911348 XP_032767239 Ccdc151 coiled-coil domain containing 151;coiled-coil domain-containing protein 151 protein-coding 625975223 LOC116894617 vomeronasal type-2 receptor 116-like 2 185817515 185834450 + 22301074;30032202 116894617 MODEL JAAIVD010000001;XM_032896331;XM_032896332 XP_032752222;XP_032752223 protein-coding 625975233 LOC116902839 uncharacterized LOC116902839 6 25473742 25475159 + 116902839 MODEL JAAIVD010000024;XR_004388240 ncrna 625975237 Hoxb8 homeobox B8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anterior/posterior pattern specification (ortholog); dorsal spinal cord development (ortholog); ASSOCIATED WITH obsessive-compulsive disorder (ortholog); trichotillomania (ortholog); FOUND IN nucleoplasm (ortholog) 9 58098599 58101984 - 22301074;30032202 116908554 MODEL JAAIVD010000002;XM_032911758;XM_032911759 XP_032767649;XP_032767650 homeobox protein Hox-B8 protein-coding 625975248 LOC116900643 40S ribosomal protein S3a-like 5 111173389 111174195 - 116900643 MODEL JAAIVD010000023 pseudo 625975249 LOC116908398 small nucleolar RNA SNORA17 8 60269541 60269670 - 116908398 MODEL JAAIVD010000027;XR_004388942 snorna 625975252 Ccdc57 coiled-coil domain containing 57 INVOLVED IN centriole replication (ortholog); cilium assembly (ortholog); G2/M transition of mitotic cell cycle (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 9 63102595 63206175 + 116909857 MODEL JAAIVD010000002;XM_032913584 XP_032769475 coiled-coil domain-containing protein 57 protein-coding 625975275 Barx1 BARX homeobox 1 INVOLVED IN animal organ development (ortholog); anterior/posterior pattern specification (ortholog); cell-cell signaling (ortholog); ASSOCIATED WITH esophagus adenocarcinoma (ortholog) 14 67647846 67651332 + 22301074;30032202 116883978 MODEL JAAIVD010000009;XM_032885210 XP_032741101 homeobox protein BarH-like 1 protein-coding 625975283 LOC116887144 putative deoxyribonuclease TATDN1 18 31998536 31999436 + 30032202 116887144 MODEL JAAIVD010000013;XM_032888693 XP_032744584 protein-coding 625975287 LOC116900422 olfactory receptor 4P4-like 5 70484982 70485908 - 22301074 116900422 MODEL JAAIVD010000023;XM_032902165 XP_032758056 protein-coding 625975290 Csnk2a2ip casein kinase 2 subunit alpha' interacting protein FOUND IN male germ cell nucleus (ortholog) 4 77926103 77928287 + 116898021 MODEL JAAIVD010000003;XM_032899412 XP_032755303 Csnka2ip casein kinase II subunit alpha'-interacting protein protein-coding 625975293 Tkfc triokinase and FMN cyclase ENCODES a protein that exhibits FAD-AMP lyase (cyclizing) activity (ortholog); glycerone kinase activity (ortholog); triokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); carbohydrate phosphorylation (ortholog); fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); inherited metabolic disorder (ortholog); Sengers syndrome (ortholog); FOUND IN cytosol (ortholog) 2 10072608 10084976 - 22301074;30032202 116890964 MODEL JAAIVD010000001;XM_032891625 XP_032747516 triokinase/FMN cyclase protein-coding 625975314 Cep57 centrosomal protein 57 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); protein homooligomerization (ortholog); spermatid development (ortholog); ASSOCIATED WITH genetic disease (ortholog); mosaic variegated aneuploidy syndrome (ortholog); mosaic variegated aneuploidy syndrome 1 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 8 9660651 9680946 - 22301074;30032202 116906787 MODEL JAAIVD010000027;XM_032909649 XP_032765540 centrosomal protein of 57 kDa protein-coding 625975329 Ccdc61 coiled-coil domain containing 61 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole assembly (ortholog); mitotic spindle assembly (ortholog); FOUND IN centriolar satellite (ortholog); centriolar subdistal appendage (ortholog); centrosome (ortholog) 2 171713220 171732106 + 30032202 116892561 MODEL JAAIVD010000001;XM_032894339 XP_032750230 coiled-coil domain-containing protein 61 protein-coding 625975347 Gng2 G protein subunit gamma 2 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); INVOLVED IN fibroblast proliferation (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; Hedgehog signaling pathway; FOUND IN heterotrimeric G-protein complex (ortholog); synapse (ortholog) 12 89691540 89791008 - 22301074;30032202 116914044 MODEL JAAIVD010000007;XM_032918322;XM_032918323 XP_032774213;XP_032774214 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 protein-coding 625975358 Racgap1 Rac GTPase activating protein 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); gamma-tubulin binding (ortholog); INVOLVED IN actomyosin contractile ring assembly (ortholog); erythrocyte differentiation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia type IIIb (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centralspindlin complex (ortholog); cleavage furrow (ortholog); cytoplasmic side of plasma membrane (ortholog) 1 272425695 272454934 - 22301074 116885175 MODEL JAAIVD010000025;XM_032886392 XP_032742283 rac GTPase-activating protein 1 protein-coding 625975379 Tex55 testis expressed 55 FOUND IN nucleus (ortholog); sperm flagellum (ortholog) 4 23745744 23760934 - 30032202 116897992 MODEL JAAIVD010000003;XM_032899394 XP_032755285 testis-specific expressed protein 55 protein-coding 625975385 Cab39 calcium binding protein 39 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular hypotonic response (ortholog); intracellular signal transduction (ortholog); negative regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); hyperthyroidism (ortholog); Lymphatic Metastasis (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog); serine/threonine protein kinase complex (ortholog) 4 157953998 158015389 + 30032202 116899583 MODEL JAAIVD010000003;XM_032901522 XP_032757413 calcium-binding protein 39 protein-coding 625975398 LOC116889689 uncharacterized protein MG323-like 22301074 116889689 MODEL JAAIVD010000052;XM_032890576 XP_032746467 protein-coding 625975399 Lrrc27 leucine rich repeat containing 27 2 62606628 62637295 - 22301074 116891364 MODEL JAAIVD010000001;XM_032892361 XP_032748252 leucine-rich repeat-containing protein 27 protein-coding 625975414 LOC116902275 ATP synthase subunit g, mitochondrial-like 1 32478164 32481625 + 116902275 MODEL JAAIVD010000025 pseudo 625975415 Cd24 CD24 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); multiple sclerosis (ortholog); pancreatic cancer (ortholog); FOUND IN cell surface (ortholog); ciliary membrane (ortholog); external side of plasma membrane (ortholog) 18 43294265 43299558 + 22301074;30032202 116887029 MODEL JAAIVD010000013;XM_032888521 XP_032744412 signal transducer CD24 protein-coding 625975421 Atp8b1 ATPase phospholipid transporting 8B1 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); cardiolipin binding (ortholog); lipid transporter activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); apical protein localization (ortholog); bile acid and bile salt transport (ortholog); ASSOCIATED WITH benign recurrent intrahepatic cholestasis 1 (ortholog); genetic disease (ortholog); intrahepatic cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cytosol (ortholog) 15 66608902 66744446 + 22301074;30032202 116884444 MODEL JAAIVD010000010;XM_032885539 XP_032741430 phospholipid-transporting ATPase IC protein-coding 625975453 Nup98 nucleoporin 98 and 96 precursor ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); mRNA binding (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN nuclear pore complex assembly (ortholog); positive regulation of mRNA splicing, via spliceosome (ortholog); protein import into nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; mRNA nuclear export pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nuclear envelope (ortholog) 2 100418214 100506747 - 22301074;30032202 116891783 MODEL JAAIVD010000001;XM_032893127;XM_032893128;XM_032893129;XM_032893130;XM_032893131 XP_032749018;XP_032749019;XP_032749020;XP_032749021;XP_032749022 nuclear pore complex protein Nup98-Nup96 protein-coding 625975502 LOC116904249 uncharacterized LOC116904249 6 124619111 124628333 + 116904249 MODEL JAAIVD010000024;XM_032907207 XP_032763098 uncharacterized protein LOC116904249 protein-coding 625975510 Grik1 glutamate ionotropic receptor kainate type subunit 1 ENCODES a protein that exhibits extracellularly glutamate-gated ion channel activity (ortholog); glutamate binding (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN adult behavior (ortholog); behavioral response to pain (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN long term potentiation; ASSOCIATED WITH childhood absence epilepsy (ortholog); status epilepticus (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) 4 55563597 55946907 + 22301074;30032202 116899024 MODEL JAAIVD010000003;XM_032900471;XM_032900472;XM_032900473;XM_032900474;XM_032900475;XM_032900476 XP_032756362;XP_032756363;XP_032756364;XP_032756365;XP_032756366;XP_032756367 glutamate receptor ionotropic, kainate 1 protein-coding 625975539 Abca13 ATP binding cassette subfamily A member 13 INVOLVED IN ceramide transport (ortholog); positive regulation of cholesterol transport (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Disease Progression (ortholog); gastric adenocarcinoma (ortholog); FOUND IN intracellular vesicle (ortholog) 11 78232591 78796827 + 22301074;30032202 116912346 MODEL JAAIVD010000006;XM_032916398 XP_032772289 ATP-binding cassette sub-family A member 13 protein-coding 625975603 LOC116900127 olfactory receptor 50-like 5 14466106 14467053 + 22301074;30032202 116900127 MODEL JAAIVD010000023;XM_032901901 XP_032757792 protein-coding 625975606 LOC116907834 eukaryotic translation initiation factor 1-like 8 6657224 6657560 + 116907834 MODEL JAAIVD010000027 pseudo 625975607 LOC116908990 U1 small nuclear ribonucleoprotein C-like 9 39824001 39824442 + 116908990 MODEL JAAIVD010000002 pseudo 625975608 LOC116883959 prolactin-8A9-like 14 46634645 46648616 - 116883959 MODEL JAAIVD010000009 pseudo 625975609 LOC116915167 U6 spliceosomal RNA 13 41786503 41786608 + 116915167 MODEL JAAIVD010000008;XR_004389829 snrna 625975612 LOC116898284 CXXC motif containing zinc binding protein-like 4 167737942 167738280 + 116898284 MODEL JAAIVD010000003 pseudo 625975613 LOC116884946 transmembrane protein 189-like 15 24977983 24979627 - 116884946 MODEL JAAIVD010000010 pseudo 625975614 Wtip WT1 interacting protein ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); miRNA-mediated post-transcriptional gene silencing (ortholog); FOUND IN P-body (ortholog) 2 164546847 164580957 + 30032202 116892286 MODEL JAAIVD010000001;XM_032893883 XP_032749774 Wilms tumor protein 1-interacting protein protein-coding 625975626 LOC116906779 olfactory receptor 147-like 8 32139041 32139997 + 22301074;30032202 116906779 MODEL JAAIVD010000027;XM_032909630 XP_032765521 protein-coding 625975630 Chd8 chromodomain helicase DNA binding protein 8 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); ATP binding (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); digestive tract development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 71633621 71692242 + 22301074 116914027 MODEL JAAIVD010000007;XM_032918291;XM_032918292;XM_032918293;XM_032918294;XM_032918295 XP_032774182;XP_032774183;XP_032774184;XP_032774185;XP_032774186 chromodomain-helicase-DNA-binding protein 8 protein-coding 625975685 LOC116910979 zinc finger protein 431-like 1 215286809 215311864 + 22301074 116910979 MODEL JAAIVD010000025;XM_032914694 XP_032770585 protein-coding 625975693 LOC116910985 zinc finger protein Rlf-like 10 79248014 79254525 + 116910985 MODEL JAAIVD010000005 pseudo 625975694 LOC116904651 U6 spliceosomal RNA 6 1441726 1441816 + 116904651 MODEL JAAIVD010000024 pseudo 625975695 LOC116892710 inorganic pyrophosphatase-like 2 21288600 21289544 + 116892710 MODEL JAAIVD010000001 pseudo 625975696 Csmd2 CUB and Sushi multiple domains 2 INVOLVED IN maintenance of postsynaptic density structure (ortholog); postsynaptic density assembly (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autistic disorder (ortholog); prostate cancer (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 1 29574792 30144390 - 116896414 MODEL JAAIVD010000025;XM_032897562 XP_032753453 CUB and sushi domain-containing protein 2 protein-coding 625975771 LOC116894408 keratin-associated protein 13-1-like 2 158546418 158546995 - 116894408 MODEL JAAIVD010000001;XM_032896114 XP_032752005 protein-coding 625975775 Tspyl4 TSPY like 4 ASSOCIATED WITH melanoma (ortholog) 18 36112055 36116330 - 22301074;30032202 116887083 MODEL JAAIVD010000013;XM_032888592 XP_032744483 testis-specific Y-encoded-like protein 4 protein-coding 625975780 Prr11 proline rich 11 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 83683887 83703700 + 30032202 116909375 MODEL JAAIVD010000002;XM_032912929 XP_032768820 proline-rich protein 11 protein-coding 625975794 Tmigd1 transmembrane and immunoglobulin domain containing 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell-cell adhesion mediator activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN brush border assembly (ortholog); cell aggregation (ortholog); cell migration (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 95579264 95594045 + 116909773 MODEL JAAIVD010000002;XM_032913461;XM_032913462;XM_032913463;XM_032913464 XP_032769352;XP_032769353;XP_032769354;XP_032769355 transmembrane and immunoglobulin domain-containing protein 1 protein-coding 625975817 Zcchc18 zinc finger CCHC-type containing 18 X 88868633 88871921 - 30032202 116888671 MODEL JAAIVD010000014;XM_032889967;XM_032889968;XM_032889969;XM_032889970 XP_032745858;XP_032745859;XP_032745860;XP_032745861 zinc finger CCHC domain-containing protein 18 protein-coding 625975834 Znf385a zinc finger protein 385A ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); p53 binding (ortholog); INVOLVED IN apoptotic process (ortholog); DNA damage response (ortholog); hemostasis (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN chromatin (ortholog); cytosol (ortholog); dendrite (ortholog) 1 259744088 259769788 + 22301074;30032202 116883207 MODEL JAAIVD010000025;XM_032884233;XM_032884234;XM_032884238 XP_032740124;XP_032740125;XP_032740129 protein-coding 625975852 LOC116883740 ferritin heavy chain-like 14 16747554 16748380 - 116883740 MODEL JAAIVD010000009 pseudo 625975853 Atp5mc3 ATP synthase membrane subunit c locus 3 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to (R)-carnitine (ortholog); response to ethanol (ortholog); ASSOCIATED WITH COVID-19 (ortholog); early-onset dystonia and/or spastic paraplegia (ortholog); genetic disease (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) 5 51261420 51264143 - 22301074;30032202 116901526 MODEL JAAIVD010000023;XM_032903504;XM_032903505 XP_032759395;XP_032759396 ATP synthase F(0) complex subunit C3, mitochondrial protein-coding 625975865 Camk1g calcium/calmodulin dependent protein kinase IG ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); endomembrane system (ortholog); plasma membrane (ortholog) 10 71330143 71353988 - 22301074;30032202 116911297 MODEL JAAIVD010000005;XM_032915207;XM_032915208 XP_032771098;XP_032771099 calcium/calmodulin-dependent protein kinase type 1G protein-coding 625975884 Rnf207 ring finger protein 207 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); protein-folding chaperone binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of membrane repolarization during ventricular cardiac muscle cell action potential (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 1 8423195 8435582 + 22301074;30032202 116892262 MODEL JAAIVD010000025;XM_032893852 XP_032749743 protein-coding 625975905 LOC116900683 cystatin-S-like 5 128708074 128712797 + 22301074;30032202 116900683 MODEL JAAIVD010000023;XM_032902386 XP_032758277 protein-coding 625975910 Pkd1 polycystin 1, transient receptor potential channel interacting ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blood vessel development (ortholog); branching morphogenesis of an epithelial tube (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Abnormal Cortical Gyration (ortholog); Animal Disease Models (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) 9 1832236 1879756 + 22301074 116909158 MODEL JAAIVD010000002;XM_032912645 XP_032768536 polycystin-1 protein-coding 625975961 Mrps31 mitochondrial ribosomal protein S31 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 13 64007723 64028177 - 22301074;30032202 116914492 MODEL JAAIVD010000008;XM_032918804 XP_032774695 28S ribosomal protein S31, mitochondrial protein-coding 625975972 LOC116895255 olfactory receptor 2AG1-like 3 310599 311546 + 22301074 116895255 MODEL JAAIVD010000012;XM_032896573 XP_032752464 protein-coding 625975975 Zw10 zw10 kinetochore protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); establishment of mitotic spindle orientation (ortholog); Golgi organization (ortholog); ASSOCIATED WITH osteosarcoma (ortholog); FOUND IN cytosol (ortholog); Dsl1/NZR complex (ortholog); endoplasmic reticulum (ortholog) 8 43543801 43568549 + 22301074;30032202 116907121 MODEL JAAIVD010000027;XM_032910094 XP_032765985 centromere/kinetochore protein zw10 homolog protein-coding 625975995 Smarcb1 SWI/SNF related BAF chromatin remodeling complex subunit B1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN blastocyst development (ortholog); blastocyst hatching (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH atypical teratoid rhabdoid tumor (ortholog); autism spectrum disorder (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromatin (ortholog); fibrillar center (ortholog); germ cell nucleus (ortholog) 18 11525831 11548754 + 22301074;30032202 116886820 MODEL JAAIVD010000013;XM_032888249;XM_032888250 XP_032744140;XP_032744141 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 protein-coding 625976010 Hnrnpa2b1 heterogeneous nuclear ribonucleoprotein A2/B1 ENCODES a protein that exhibits DNA polymerase binding (ortholog); G-rich strand telomeric DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA geometric change (ortholog); lung development (ortholog); male gonad development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) 6 89625026 89633791 + 22301074 116903817 MODEL JAAIVD010000024;XM_032906520;XM_032906521;XM_032906522;XM_032906523;XM_032906524;XM_032906525;XM_032906526;XM_032906527;XR_004388299;XR_004388300 XP_032762411;XP_032762412;XP_032762413;XP_032762414;XP_032762415;XP_032762416;XP_032762417;XP_032762418 heterogeneous nuclear ribonucleoproteins A2/B1 protein-coding 625976049 Znf691 zinc finger protein 691 1 37775365 37779547 + 30032202 116887107 MODEL JAAIVD010000025;XM_032888645;XM_032888654;XM_032888663 XP_032744536;XP_032744545;XP_032744554 protein-coding 625976061 Lamb2 laminin subunit beta 2 ENCODES a protein that exhibits integrin binding (ortholog); structural constituent of synapse-associated extracellular matrix (ortholog); INVOLVED IN astrocyte development (ortholog); axon extension involved in regeneration (ortholog); axon guidance (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); cognitive disorder (ortholog); Diabetic Nephropathies (ortholog); FOUND IN basement membrane (ortholog); laminin complex (ortholog); laminin-3 complex (ortholog) 8 99811972 99824437 + 30032202 116907592 MODEL JAAIVD010000027;XM_032910632 XP_032766523 laminin subunit beta-2 protein-coding 625976098 Mrpl33 mitochondrial ribosomal protein L33 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 7 22541847 22550056 - 22301074;30032202 116905963 MODEL JAAIVD010000026;XM_032908968 XP_032764859 39S ribosomal protein L33, mitochondrial protein-coding 625976106 Neu3 neuraminidase 3 ENCODES a protein that exhibits alpha-sialidase activity (ortholog); exo-alpha-sialidase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); ganglioside catabolic process (ortholog); negative regulation of clathrin-dependent endocytosis (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN early endosome membrane (ortholog); external side of plasma membrane (ortholog); lysosomal membrane (ortholog) 2 98090758 98101356 - 30032202 116891728 MODEL JAAIVD010000001;XM_032893024;XM_032893025 XP_032748915;XP_032748916 sialidase-3 protein-coding 625976116 Borcs6 BLOC-1 related complex subunit 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lysosome localization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN BORC complex (ortholog) 9 48653782 48655752 + 30032202 116909772 MODEL JAAIVD010000002;XM_032913460 XP_032769351 BLOC-1-related complex subunit 6 protein-coding 625976121 Cr2 complement C3d receptor 2 ENCODES a protein that exhibits complement binding (ortholog); complement receptor activity (ortholog); DNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); B cell activation (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); common variable immunodeficiency 7 (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 10 78706856 78738408 + 116911299 MODEL JAAIVD010000005;XM_032915210;XM_032915211 XP_032771101;XP_032771102 complement receptor type 2 protein-coding 625976151 LOC116887589 butyrophilin subfamily 1 member A1-like 18 7159511 7167457 - 30032202 116887589 MODEL JAAIVD010000013;XM_032889212 XP_032745103 protein-coding 625976162 LOC116910733 U6atac minor spliceosomal RNA 9 3423582 3423707 - 116910733 MODEL JAAIVD010000002;XR_004389251 snrna 625976165 LOC116893583 40S ribosomal protein S23-like 2 229321495 229321950 + 116893583 MODEL JAAIVD010000001 pseudo 625976166 Sh3gl2 SH3 domain containing GRB2 like 2, endophilin A1 ENCODES a protein that exhibits identical protein binding (ortholog); lipid binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); lipid tube assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 68546762 68721309 - 22301074;30032202 116900537 MODEL JAAIVD010000025;XM_032902267 XP_032758158 endophilin-A1 protein-coding 625976179 Bbox1 gamma-butyrobetaine hydroxylase 1 ENCODES a protein that exhibits gamma-butyrobetaine dioxygenase activity (ortholog); identical protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 5 88548871 88596069 - 22301074;30032202 116900530 MODEL JAAIVD010000023;XM_032902257 XP_032758148 gamma-butyrobetaine dioxygenase protein-coding 625976191 LOC116894906 small nucleolar RNA SNORA71 2 34224442 34224573 - 116894906 MODEL JAAIVD010000001;XR_004387108 snorna 625976194 Bscl2 BSCL2 lipid droplet biogenesis associated, seipin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cytosolic lipolysis (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Asthenozoospermia (ortholog); autosomal dominant distal hereditary motor neuronopathy 13 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 2 9098005 9109758 - 22301074;30032202 116890921 MODEL JAAIVD010000001;XM_032891554;XM_032891555;XM_032891556 XP_032747445;XP_032747446;XP_032747447 seipin protein-coding 625976217 LOC116914927 60S ribosomal protein L34-like 13 6222491 6223042 + 116914927 MODEL JAAIVD010000008 pseudo 625976218 Dbndd2 dysbindin domain containing 2 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); ERK1 and ERK2 cascade (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog) 5 153474942 153501787 - 22301074;30032202 116902359 MODEL JAAIVD010000023;XM_032904849;XM_032904850;XM_032904851;XM_032904852;XM_032904853 XP_032760740;XP_032760741;XP_032760742;XP_032760743;XP_032760744 dysbindin domain-containing protein 2 protein-coding 625976237 Alkal2 ALK and LTK ligand 2 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of ERK5 cascade (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 7 44283661 44293334 + 22301074;30032202 116904941 MODEL JAAIVD010000026;XM_032907585;XM_032907586 XP_032763476;XP_032763477 protein-coding 625976251 Timp1 TIMP metallopeptidase inhibitor 1 ENCODES a protein that exhibits cytokine activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); peptidase inhibitor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to acetaldehyde (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH adrenoleukodystrophy (ortholog); adult respiratory distress syndrome (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) X 2777611 2782506 + 22301074;30032202 116889399 MODEL JAAIVD010000014;XM_032890503;XM_032890504;XM_032890505;XM_032890506 XP_032746394;XP_032746395;XP_032746396;XP_032746397 metalloproteinase inhibitor 1 protein-coding 625976272 LOC116900470 olfactory receptor 4A5-like 5 71439886 71440830 - 22301074 116900470 MODEL JAAIVD010000023;XM_032902206 XP_032758097 protein-coding 625976275 Snx32 sorting nexin 32 INVOLVED IN endosomal transport (ortholog); endosome to lysosome transport via multivesicular body sorting pathway (ortholog); neuron projection extension (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN early endosome (ortholog); late endosome (ortholog); plasma membrane (ortholog) 2 2162851 2180581 + 22301074;30032202 116890710 MODEL JAAIVD010000001;XM_032891146;XM_032891147;XM_032891148;XM_032891149;XM_032891150;XM_032891151 XP_032747037;XP_032747038;XP_032747039;XP_032747040;XP_032747041;XP_032747042 sorting nexin-32 protein-coding 625976308 LOC116903125 solute carrier organic anion transporter family member 1A4 6 7344779 7394222 - 22301074;30032202 116903125 MODEL JAAIVD010000024;XM_032905477 XP_032761368 protein-coding 625976327 Npnt nephronectin ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cell-cell adhesion mediated by integrin (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH bilateral renal aplasia (ortholog); renal agenesis (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 3 25960569 26032001 + 22301074 116896236 MODEL JAAIVD010000012;XM_032897299;XM_032897300;XM_032897301;XM_032897302 XP_032753190;XP_032753191;XP_032753192;XP_032753193 protein-coding 625976350 LOC116888679 40S ribosomal protein S2-like X 3254550 3255296 + 116888679 MODEL JAAIVD010000014 pseudo 625976351 LOC116911886 U6 spliceosomal RNA 10 9499475 9499569 + 116911886 MODEL JAAIVD010000005 pseudo 625976352 Daglb diacylglycerol lipase beta ENCODES a protein that exhibits lipase activity (ortholog); monoacylglycerol lipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); cannabinoid biosynthetic process (ortholog); icosanoid metabolic process (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 16 9646453 9688453 - 22301074 116885483 MODEL JAAIVD010000004;XM_032886772;XM_032886773 XP_032742663;XP_032742664 sn1-specific diacylglycerol lipase beta protein-coding 625976377 Ggact gamma-glutamylamine cyclotransferase ENCODES a protein that exhibits gamma-glutamylaminecyclotransferase activity (ortholog); INVOLVED IN modified amino acid catabolic process (ortholog) 12 2004355 2005323 + 30032202 116913624 MODEL JAAIVD010000007;XM_032917888 XP_032773779 gamma-glutamylaminecyclotransferase protein-coding 625976382 LOC116887654 60S acidic ribosomal protein P0-like 18 21280655 21282916 - 116887654 MODEL JAAIVD010000013 pseudo 625976383 Phf20 PHD finger protein 20 ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytosol (ortholog); histone acetyltransferase complex (ortholog); MLL1 complex (ortholog) 5 135553830 135658973 + 22301074;30032202 116902201 MODEL JAAIVD010000023;XM_032904579 XP_032760470 protein-coding 625976405 Rnase13 ribonuclease A family member 13 (inactive) 12 71975317 71975915 + 30032202 116913977 MODEL JAAIVD010000007;XM_032918249 XP_032774140 probable inactive ribonuclease-like protein 13 protein-coding 625976410 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42541063 42541134 + 116884240 MODEL JAAIVD010000009 trna 625976411 LOC116906481 small nucleolar RNA SNORA40 7 95696248 95696368 + 116906481 MODEL JAAIVD010000026 pseudo 625976412 LOC116888239 60S ribosomal protein L9-like 1 78958876 78959467 - 116888239 MODEL JAAIVD010000025 pseudo 625976413 Dolk dolichol kinase ENCODES a protein that exhibits dolichol kinase activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); dolichyl monophosphate biosynthetic process (ortholog); obsolete dolichol metabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Im (ortholog); dilated cardiomyopathy (ortholog); hypertrophic cardiomyopathy 26 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 5 5344330 5346430 + 30032202 116901187 MODEL JAAIVD010000023;XM_032902871 XP_032758762 protein-coding 625976418 LOC116910642 U6 spliceosomal RNA 9 83357397 83357500 + 116910642 MODEL JAAIVD010000002;XR_004389179 snrna 625976421 Rad21 RAD21 cohesin complex component ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); lncRNA binding (ortholog); INVOLVED IN chromatin looping (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); colorectal carcinoma (ortholog); Cornelia de Lange syndrome (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); cohesin complex (ortholog) 1 226305500 226332431 + 22301074;30032202 116911365 MODEL JAAIVD010000025;XM_032915295 XP_032771186 double-strand-break repair protein rad21 homolog protein-coding 625976439 LOC116904718 U1 spliceosomal RNA 6 76563463 76563613 + 116904718 MODEL JAAIVD010000024 pseudo 625976440 LOC116906142 chromobox protein homolog 1-like 7 92495500 92499318 - 116906142 MODEL JAAIVD010000026 pseudo 625976441 LOC116908231 transcription initiation factor IIA subunit 2-like 8 82809799 82810479 - 116908231 MODEL JAAIVD010000027 pseudo 625976442 Bbs7 Bardet-Biedl syndrome 7 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 1/7, Digenic (ortholog); FOUND IN axoneme (ortholog); BBSome (ortholog); centrosome (ortholog) 3 117374255 117413920 + 22301074;30032202 116896926 MODEL JAAIVD010000012;XM_032898495 XP_032754386 Bardet-Biedl syndrome 7 protein protein-coding 625976466 Add2 adducin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH hereditary spherocytosis type 1 (ortholog); hypertension (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); F-actin capping protein complex (ortholog); glutamatergic synapse (ortholog) 6 60203871 60238746 - 30032202 116903558 MODEL JAAIVD010000024;XM_032906175 XP_032762066 beta-adducin protein-coding 625976484 Il9r interleukin 9 receptor ENCODES a protein that exhibits interleukin-9 binding (ortholog); interleukin-9 receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); cystic fibrosis (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 9 3686394 3695671 + 22301074;30032202 116910504 MODEL JAAIVD010000002;XM_032914400;XM_032914401 XP_032770291;XP_032770292 interleukin-9 receptor protein-coding 625976498 LOC116912436 S-adenosylmethionine decarboxylase proenzyme-like 11 76892855 76893319 - 22301074;30032202 116912436 MODEL JAAIVD010000006;XM_032916504 XP_032772395 protein-coding 625976502 Sgta small glutamine rich tetratricopeptide repeat co-chaperone alpha ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of ERAD pathway (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 1 153827879 153844654 + 22301074;30032202 116904602 MODEL JAAIVD010000025;XM_032907402;XM_032907405 XP_032763293;XP_032763296 small glutamine rich tetratricopeptide repeat containing alpha;small glutamine-rich tetratricopeptide repeat-containing protein alpha protein-coding 625976520 Lrguk leucine rich repeats and guanylate kinase domain containing INVOLVED IN axoneme assembly (ortholog); spermatogenesis (ortholog); FOUND IN acrosomal vesicle (ortholog); manchette (ortholog) 6 105554894 105661575 - 22301074;30032202 116903986 MODEL JAAIVD010000024;XM_032906791 XP_032762682 leucine-rich repeat and guanylate kinase domain-containing protein protein-coding 625976544 LOC116897964 caspase-6-like 4 20645978 20650968 - 116897964 MODEL JAAIVD010000003 pseudo 625976545 Ufsp1 UFM1 specific peptidase 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); deUFMylase activity (ortholog); INVOLVED IN protein maturation (ortholog); protein ufmylation (ortholog); FOUND IN cytosol (ortholog) 16 16736494 16737631 - 116885202 MODEL JAAIVD010000004;XM_032886434 XP_032742325 UFM1 specific peptidase 1 (inactive);inactive Ufm1-specific protease 1 protein-coding 625976550 Dlx6 distal-less homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); epithelial cell differentiation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); split hand-foot malformation 1 (ortholog); Weissenbacher-Zweymuller syndrome (ortholog) 6 131814929 131819391 - 22301074;30032202 116904089 MODEL JAAIVD010000024;XM_032906960 XP_032762851 homeobox protein DLX-6 protein-coding 625976557 Ufl1 UFM1 specific ligase 1 ENCODES a protein that exhibits protein kinase binding (ortholog); UFM1 ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 152369587 152402671 - 22301074;30032202 116904139 MODEL JAAIVD010000025;XM_032907031 XP_032762922 E3 UFM1-protein ligase 1 protein-coding 625976580 LOC116887666 vacuolar protein-sorting-associated protein 36-like 18 28612613 28646063 + 116887666 MODEL JAAIVD010000013 pseudo 625976581 LOC116896918 60S ribosomal protein L29-like 3 116458279 116458749 + 116896918 MODEL JAAIVD010000012 pseudo 625976582 Znf687 zinc finger protein 687 ASSOCIATED WITH Paget's disease of bone (ortholog); Paget's disease of bone 6 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 3 62232232 62241214 + 116896573 MODEL JAAIVD010000012;XM_032897784;XM_032897785;XM_032897786;XM_032897787 XP_032753675;XP_032753676;XP_032753677;XP_032753678 protein-coding 625976606 Hydin HYDIN axonemal central pair apparatus protein INVOLVED IN actin cytoskeleton organization (ortholog); axonemal central apparatus assembly (ortholog); brain development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN axonemal central apparatus (ortholog); axonemal central pair projection (ortholog); cilium (ortholog) 17 29968133 30319264 + 30032202 116886165 MODEL JAAIVD010000011;XM_032887538 XP_032743429 hydrocephalus-inducing protein homolog protein-coding 625976697 Mybpc1 myosin binding protein C1 ENCODES a protein that exhibits myosin binding (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); congenital myopathy 16 (ortholog); distal arthrogryposis (ortholog) 1 167593897 167681383 - 22301074 116907801 MODEL JAAIVD010000025;XM_032910951 XP_032766842 myosin-binding protein C, slow-type protein-coding 625976727 Hmx2 H6 family homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); inner ear morphogenesis (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH High Myopia (ortholog) 2 70297741 70299643 - 22301074;30032202 116893881 MODEL JAAIVD010000001;XM_032895603 XP_032751494 homeobox protein HMX2 protein-coding 625976732 Cebpb CCAAT enhancer binding protein beta ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN forkhead class A signaling pathway; interleukin-3 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Bacteremia (ortholog); FOUND IN C/EBP complex (ortholog); CHOP-C/EBP complex (ortholog); chromatin (ortholog) 5 150315288 150316758 - 30032202 116902306 MODEL JAAIVD010000023;XM_032904751 XP_032760642 CCAAT/enhancer-binding protein beta protein-coding 625976737 Nanos3 nanos C2HC-type zinc finger 3 ENCODES a protein that exhibits enzyme activator activity (ortholog); RNA binding (ortholog); INVOLVED IN germ cell development (ortholog); mRNA destabilization (ortholog); negative regulation of apoptotic signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 17 16109834 16118066 + 30032202 116886537 MODEL JAAIVD010000011;XM_032888056;XR_004386109 XP_032743947 nanos homolog 3 protein-coding 625976746 Gmnc geminin coiled-coil domain containing ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); DNA replication (ortholog) 4 13281996 13290237 + 30032202 116897857 MODEL JAAIVD010000003;XM_032899265 XP_032755156 geminin coiled-coil domain-containing protein 1 protein-coding 625976755 Tbrg1 transforming growth factor beta regulator 1 INVOLVED IN DNA replication (ortholog); negative regulation of cell population proliferation (ortholog); protein localization to nucleoplasm (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 33810844 33818305 - 22301074;30032202 116906659 MODEL JAAIVD010000027;XM_032909444 XP_032765335 protein-coding 625976768 LOC116888207 60S ribosome subunit biogenesis protein NIP7 homolog X 127020658 127024298 + 116888207 MODEL JAAIVD010000014 pseudo 625976769 Pdgfc platelet derived growth factor C ENCODES a protein that exhibits platelet-derived growth factor receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bone development (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Mesothelioma (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular region (ortholog) 3 72320097 72500390 - 22301074;30032202 116896754 MODEL JAAIVD010000012;XM_032898198 XP_032754089 platelet-derived growth factor C protein-coding 625976779 LOC116902738 uncharacterized LOC116902738 6 58588042 58589039 + 116902738 MODEL JAAIVD010000024;XR_004388234 ncrna 625976783 LOC116911649 60S ribosomal protein L28-like 10 37035923 37036384 + 116911649 MODEL JAAIVD010000005 pseudo 625976784 Cfap276 cilia and flagella associated protein 276 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease intermediate type (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) 3 49717411 49724662 - 116895361 MODEL JAAIVD010000012;XM_032896658 XP_032752549 C3H1orf194 chromosome 3 C1orf194 homolog;protein C1orf194 homolog protein-coding 625976793 LOC116893403 argininosuccinate synthase-like 2 173179580 173183799 - 116893403 MODEL JAAIVD010000001 pseudo 625976794 LOC116894979 small nucleolar RNA SNORA41 2 215702955 215703095 - 116894979 MODEL JAAIVD010000001;XR_004387170 snorna 625976797 Pld2 phospholipase D2 ENCODES a protein that exhibits phospholipase D activity (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to phorbol 13-acetate 12-myristate (ortholog); G protein-coupled receptor internalization (ortholog); neuron projection development (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; glycerophospholipid metabolic pathway; mTOR signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Seizures (ortholog); FOUND IN brush border membrane (ortholog); caveola (ortholog); lamellipodium (ortholog) 9 50154899 50171322 + 22301074;30032202 116909527 MODEL JAAIVD010000002;XM_032913135 XP_032769026 protein-coding 625976826 Csf3r colony stimulating factor 3 receptor ENCODES a protein that exhibits granulocyte colony-stimulating factor binding (ortholog); INVOLVED IN amelogenesis (ortholog); neutrophil chemotaxis (ortholog); regulation of myeloid cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); bacterial pneumonia (ortholog); chronic myelomonocytic leukemia (ortholog) 1 32256795 32275611 - 22301074;30032202 116887008 MODEL JAAIVD010000025;XM_032888497 XP_032744388 granulocyte colony-stimulating factor receptor protein-coding 625976847 Dppa2 developmental pluripotency associated 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); lung-associated mesenchyme development (ortholog); positive regulation of stem cell proliferation (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 32824012 32831008 + 30032202 116897895 MODEL JAAIVD010000003;XM_032899301 XP_032755192 developmental pluripotency-associated protein 2 protein-coding 625976856 LOC116913609 olfactory receptor 1537-like 12 269364 270323 - 22301074;30032202 116913609 MODEL JAAIVD010000007;XM_032917861 XP_032773752 protein-coding 625976859 LOC116895894 60S ribosomal protein L26-like 3 116172859 116180508 + 116895894 MODEL JAAIVD010000012 pseudo 625976860 Prss58 serine protease 58 6 41739979 41744030 - 22301074 116902696 MODEL JAAIVD010000024;XM_032905052 XP_032760943 protein-coding 625976868 LOC116898898 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 4 40128359 40128639 - 116898898 MODEL JAAIVD010000003 pseudo 625976869 LOC116907275 olfactory receptor 867-like 8 16159756 16160660 + 116907275 MODEL JAAIVD010000027 pseudo 625976870 LOC116887105 keratin-associated protein 10-3-like 18 1132896 1133624 - 22301074;30032202 116887105 MODEL JAAIVD010000013;XM_032888638;XM_032888639 XP_032744529;XP_032744530 keratin-associated protein 10-11-like protein-coding 625976876 Exoc3l1 exocyst complex component 3 like 1 INVOLVED IN exocytosis (ortholog); peptide hormone secretion (ortholog); FOUND IN exocyst (ortholog); secretory granule (ortholog) 17 25016534 25032641 - 22301074;30032202 116886373 MODEL JAAIVD010000011;XM_032887837 XP_032743728 exocyst complex component 3-like protein protein-coding 625976894 LOC116906333 U6 spliceosomal RNA 7 25641756 25641845 - 116906333 MODEL JAAIVD010000026 pseudo 625976895 Rgcc regulator of cell cycle ENCODES a protein that exhibits kinase activator activity (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); complement receptor mediated signaling pathway (ortholog); fibroblast activation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Myocardial Ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 12 45057701 45070287 + 22301074;30032202 116913752 MODEL JAAIVD010000007;XM_032918058 XP_032773949 regulator of cell cycle RGCC protein-coding 625976904 LOC116899946 U2 spliceosomal RNA 4 180783529 180783677 - 116899946 MODEL JAAIVD010000003 pseudo 625976905 LOC116902634 small nucleolar RNA SNORD11B 5 6641436 6641515 - 116902634 MODEL JAAIVD010000023;XR_004388211 snorna 625976908 LOC116888918 protein scribble homolog X 53156542 53162386 + 116888918 MODEL JAAIVD010000014 pseudo 625976909 Akna AT-hook transcription factor INVOLVED IN delamination (ortholog); epithelial to mesenchymal transition (ortholog); neuroblast delamination (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytosol (ortholog) 1 90184299 90223257 + 30032202 116901283 MODEL JAAIVD010000025;XM_032903069 XP_032758960 microtubule organization protein AKNA protein-coding 625976935 Kiaa1191 KIAA1191 ortholog FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 14 72893153 72905488 - 30032202 116915205 MODEL JAAIVD010000009;XM_032919571;XM_032919572;XM_032919573;XM_032919574;XM_032919575 XP_032775462;XP_032775463;XP_032775464;XP_032775465;XP_032775466 putative monooxygenase p33MONOX protein-coding 625976961 Irak1 interleukin 1 receptor associated kinase 1 ENCODES a protein that exhibits heat shock protein binding (ortholog); identical protein binding (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); Brain Hypoxia-Ischemia (ortholog); brain ischemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lipid droplet (ortholog) X 128545848 128555519 + 22301074;30032202 116888497 MODEL JAAIVD010000014;XM_032889781 XP_032745672 interleukin-1 receptor-associated kinase 1 protein-coding 625976980 LOC116914318 calcium-binding and coiled-coil domain-containing protein 2-like 13 44078651 44080046 - 116914318 MODEL JAAIVD010000008 pseudo 625976981 Saysd1 SAYSVFN motif domain containing 1 ENCODES a protein that exhibits UFM1-modified protein reader activity (ortholog); INVOLVED IN protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled ribosome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 89882162 89887833 - 116913776 MODEL JAAIVD010000007;XM_032918081 XP_032773972 SAYSvFN domain-containing protein 1 protein-coding 625976987 LOC116884689 protein transport protein Sec61 subunit gamma-like 15 3243509 3243704 + 116884689 MODEL JAAIVD010000010 pseudo 625976988 LOC116888768 gamma-aminobutyric acid receptor-associated protein-like 2 X 23763238 23763747 + 116888768 MODEL JAAIVD010000014 pseudo 625976989 LOC116900419 olfactory receptor 4P4-like 5 70427123 70428052 - 22301074 116900419 MODEL JAAIVD010000023;XM_032902163 XP_032758054 protein-coding 625976992 Cnih2 cornichon family AMPA receptor auxiliary protein 2 INVOLVED IN localization within membrane (ortholog); negative regulation of anterograde synaptic vesicle transport (ortholog); negative regulation of receptor localization to synapse (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 2 2553190 2558848 + 22301074;30032202 116890737 MODEL JAAIVD010000001;XM_032891194;XM_032891195 XP_032747085;XP_032747086 protein cornichon homolog 2 protein-coding 625977005 LOC116914340 histone H2B type 1-H-like 13 50783296 50791484 + 116914340 MODEL JAAIVD010000008 pseudo 625977006 LOC116897407 U6 spliceosomal RNA 3 196100470 196100576 - 116897407 MODEL JAAIVD010000012;XR_004387450 snrna 625977009 Trnaa-cgc transfer RNA alanine (anticodon CGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42441825 42441896 - 116884185 MODEL JAAIVD010000009 trna 625977010 LOC116899984 U2 small nuclear ribonucleoprotein B''-like 5 141627539 141631106 - 116899984 MODEL JAAIVD010000023 pseudo 625977011 Defb128 defensin beta 128 INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog) 5 131799302 131802086 + 22301074 116900694 MODEL JAAIVD010000023;XM_032902397 XP_032758288 beta-defensin 128 protein-coding 625977015 Cnksr1 connector enhancer of kinase suppressor of Ras 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; interleukin-3 signaling pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); Usher syndrome type 2C (ortholog); FOUND IN cell cortex (ortholog) 1 24005740 24016635 + 22301074 116894818 MODEL JAAIVD010000025;XM_032896493 XP_032752384 protein-coding 625977040 Ncapd3 non-SMC condensin II complex subunit D3 ENCODES a protein that exhibits histone H4K20me1 reader activity (ortholog); INVOLVED IN meiotic chromosome separation (ortholog); mitotic chromosome condensation (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH intellectual disability (ortholog); primary autosomal recessive microcephaly 22 (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 8 22923814 22991550 + 22301074;30032202 116908038 MODEL JAAIVD010000027;XM_032911311 XP_032767202 condensin-2 complex subunit D3 protein-coding 625977079 LOC116885342 PRELI domain-containing protein 1, mitochondrial-like 1 33580172 33580985 - 116885342 MODEL JAAIVD010000025 pseudo 625977080 Ralgps1 Ral GEF with PH domain and SH3 binding motif 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of Ral protein signal transduction (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog) 5 2265024 2499438 + 22301074;30032202 116901122 MODEL JAAIVD010000023;XM_032902700;XM_032902701;XM_032902703;XM_032902704;XM_032902705;XM_032902706 XP_032758591;XP_032758592;XP_032758594;XP_032758595;XP_032758596;XP_032758597 ras-specific guanine nucleotide-releasing factor RalGPS1 protein-coding 625977116 LOC116894003 olfactory receptor 51G1-like 2 101636981 101637938 + 22301074 116894003 MODEL JAAIVD010000001;XM_032895719 XP_032751610 protein-coding 625977119 LOC116904914 uncharacterized LOC116904914 7 38234909 38235902 + 116904914 MODEL JAAIVD010000026;XR_004388476 ncrna 625977123 Ccdc92b coiled-coil domain containing 92B 9 93352951 93374244 + 116909892 MODEL JAAIVD010000002;XM_032913638;XM_032913639 XP_032769529;XP_032769530 protein-coding 625977134 LOC116893276 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 144368934 144395529 - 22301074;30032202 116893276 MODEL JAAIVD010000001;XM_032895121 XP_032751012 protein-coding 625977143 LOC116883234 40S ribosomal protein S3a-like 14 58760993 58761580 + 116883234 MODEL JAAIVD010000009 pseudo 625977144 LOC116910009 proteasome subunit beta type-3-like 9 34458367 34458987 - 116910009 MODEL JAAIVD010000002 pseudo 625977145 LOC116909306 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 9 91767543 91768333 + 116909306 MODEL JAAIVD010000002 pseudo 625977146 LOC116914870 uncharacterized LOC116914870 13 14364441 14365226 + 116914870 MODEL JAAIVD010000008;XR_004389781 ncrna 625977150 LOC116895347 pancreatic alpha-amylase-like 3 46108034 46116475 + 116895347 MODEL JAAIVD010000012 pseudo 625977151 LOC116914583 uncharacterized LOC116914583 13 69267210 69680553 - 116914583 MODEL JAAIVD010000008;XR_004389755 ncrna 625977157 Tll1 tolloid like 1 ENCODES a protein that exhibits collagen binding (ortholog); ASSOCIATED WITH atrial heart septal defect 6 (ortholog); congenital heart disease (ortholog); coronary artery disease (ortholog) 13 24882031 25070285 + 22301074 116914791 MODEL JAAIVD010000008;XM_032919237 XP_032775128 tolloid-like protein 1 protein-coding 625977182 LOC116899977 protein FAM162A-like 5 133814768 133815181 - 116899977 MODEL JAAIVD010000023 pseudo 625977183 Rad52 RAD52 DNA repair protein ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA recombination (ortholog); ASSOCIATED WITH colon cancer (ortholog); colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog); protein-DNA complex (ortholog) 6 26823788 26833471 - 22301074;30032202 116903337 MODEL JAAIVD010000024;XM_032905785;XM_032905786 XP_032761676;XP_032761677 DNA repair protein RAD52 homolog;RAD52 homolog, DNA repair protein protein-coding 625977199 Prkcb protein kinase C beta ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); chromatin binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium ion transport (ortholog); PARTICIPATES IN insulin signaling pathway; interleukin-2 signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog); FOUND IN brush border membrane (ortholog); calyx of Held (ortholog); centrosome (ortholog) 2 79220402 79556347 - 22301074 116891553 MODEL JAAIVD010000001;XM_032892723;XM_032892724 XP_032748614;XP_032748615 protein kinase C beta type protein-coding 625977225 LOC116887203 heat shock 70 kDa protein 1A-like 18 7565264 7568166 - 22301074;30032202 116887203 MODEL JAAIVD010000013;XM_032888760 XP_032744651 protein-coding 625977230 Dpt dermatopontin INVOLVED IN collagen fibril organization (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); sensorineural hearing loss (ortholog); varicose veins (ortholog) 10 43980576 44009720 + 30032202 116911674 MODEL JAAIVD010000005;XM_032915628 XP_032771519 protein-coding 625977238 Slc67a1 solute carrier family 67 member 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN xenobiotic detoxification by transmembrane export across the plasma membrane (ortholog); xenobiotic transport (ortholog); ASSOCIATED WITH breast adenocarcinoma (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); nuclear envelope (ortholog) 2 6200664 6225923 - 22301074;30032202 116890833 MODEL JAAIVD010000001;XM_032891354 XP_032747245 Slc22a18 solute carrier family 22 member 18 protein-coding 625977253 LOC116908167 uncharacterized LOC116908167 8 45570069 45583150 - 116908167 MODEL JAAIVD010000027;XM_032911465 XP_032767356 uncharacterized protein LOC116908167 protein-coding 625977265 Nme5 NME/NM23 family member 5 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); DNA catabolic process (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); Primary Ciliary Dyskinesia 48 (ortholog); FOUND IN 9+2 motile cilium (ortholog); radial spoke (ortholog); sperm flagellum (ortholog) 15 9780415 9796660 + 22301074;30032202 116884810 MODEL JAAIVD010000010;XM_032886041;XM_032886042 XP_032741932;XP_032741933 nucleoside diphosphate kinase homolog 5 protein-coding 625977278 LOC116884047 spermatogenesis-associated protein 31D4-like 14 78408317 78413907 - 116884047 MODEL JAAIVD010000009;XM_032885293 XP_032741184 protein-coding 625977284 Ermn ermin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); morphogenesis of a branching structure (ortholog); regulation of cell projection organization (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); filopodium (ortholog) 5 35877012 35882539 - 22301074;30032202 116901425 MODEL JAAIVD010000023;XM_032903317 XP_032759208 protein-coding 625977291 Zscan20 zinc finger and SCAN domain containing 20 1 29534928 29555685 + 30032202 116896341 MODEL JAAIVD010000025;XM_032897447 XP_032753338 zinc finger and SCAN domain-containing protein 20 protein-coding 625977302 Rasgef1a RasGEF domain family member 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of Ras protein signal transduction (ortholog) 6 28640010 28721387 - 22301074;30032202 116903353 MODEL JAAIVD010000024;XM_032905828 XP_032761719 ras-GEF domain-containing family member 1A protein-coding 625977319 Kifbp kinesin family binding protein ENCODES a protein that exhibits kinesin binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); mitochondrion transport along microtubule (ortholog); transport along microtubule (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 3 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); Goldberg-Shprintzen syndrome (ortholog); FOUND IN mitochondrion (ortholog) 18 28390495 28414544 - 22301074 116887126 MODEL JAAIVD010000013;XM_032888673 XP_032744564 KIF-binding protein protein-coding 625977330 Rad1 RAD1 checkpoint DNA exonuclease INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); meiotic recombination checkpoint signaling (ortholog); FOUND IN checkpoint clamp complex (ortholog); chromosome (ortholog); nucleoplasm (ortholog) 3 170243333 170251512 - 22301074;30032202 116897126 MODEL JAAIVD010000012;XM_032898782;XM_032898783;XM_032898784 XP_032754673;XP_032754674;XP_032754675 cell cycle checkpoint protein RAD1 protein-coding 625977345 LOC116902762 lithostathine-2 6 67921234 67923499 - 30032202 116902762 MODEL JAAIVD010000024;XM_032905110 XP_032761001 protein-coding 625977352 LOC116893905 60S ribosomal protein L36a-like 2 75301937 75302296 + 22301074;30032202 116893905 MODEL JAAIVD010000001;XM_032895629 XP_032751520 protein-coding 625977357 LOC116895677 40S ribosomal protein S13-like 3 198706774 198707227 - 116895677 MODEL JAAIVD010000012 pseudo 625977358 LOC116897871 cystatin-A-like 4 21298343 21303216 - 22301074;30032202 116897871 MODEL JAAIVD010000003;XM_032899279 XP_032755170 protein-coding 625977365 Igsf5 immunoglobulin superfamily member 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog) 4 48266315 48304200 - 30032202 116898947 MODEL JAAIVD010000003;XM_032900363 XP_032756254 protein-coding 625977378 Ndufs3 NADH:ubiquinone oxidoreductase core subunit S3 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); reactive oxygen species metabolic process (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 65069124 65076356 - 22301074 116901604 MODEL JAAIVD010000023;XM_032903631 XP_032759522 NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial protein-coding 625977389 LOC116904219 60S ribosomal protein L37a-like 1 153383907 153384154 - 116904219 MODEL JAAIVD010000025 pseudo 625977390 LOC116895874 histone deacetylase 1-like 3 105658122 105659468 + 116895874 MODEL JAAIVD010000012 pseudo 625977391 LOC116888537 transcriptional regulator ATRX X 65349556 65488454 - 22301074 116888537 MODEL JAAIVD010000014;XM_032889831;XM_032889832;XM_032889833;XM_032889834;XM_032889835;XM_032889836;XM_032889837;XM_032889838;XM_032889839;XM_032889840;XM_032889841;XM_032889842;XM_032889843 XP_032745722;XP_032745723;XP_032745724;XP_032745725;XP_032745726;XP_032745727;XP_032745728;XP_032745729;XP_032745730;XP_032745731;XP_032745732;XP_032745733;XP_032745734 protein-coding 625977451 LOC116909070 male-enhanced antigen 1-like 9 71847884 71848620 - 116909070 MODEL JAAIVD010000002 pseudo 625977452 LOC116908762 40S ribosomal protein S10-like 9 51342635 51343151 + 116908762 MODEL JAAIVD010000002 pseudo 625977453 LOC116887748 U2 spliceosomal RNA 18 19982292 19982444 + 116887748 MODEL JAAIVD010000013 pseudo 625977454 Adpgk ADP dependent glucokinase ENCODES a protein that exhibits ADP-specific glucokinase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 8 53146457 53172221 + 30032202 116907355 MODEL JAAIVD010000027;XM_032910288;XM_032910289 XP_032766179;XP_032766180 ADP-dependent glucokinase protein-coding 625977468 LOC116900200 ubiquitin-conjugating enzyme E2 S-like 5 51149840 51158678 + 116900200 MODEL JAAIVD010000023 pseudo 625977469 Evpl envoplakin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); FOUND IN cornified envelope (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) 9 67831155 67844984 + 22301074;30032202 116909658 MODEL JAAIVD010000002;XM_032913311 XP_032769202 protein-coding 625977494 Prrx1 paired related homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN artery morphogenesis (ortholog); cartilage development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); ASSOCIATED WITH agnathia-otocephaly complex (ortholog); atrial fibrillation (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 42510994 42576674 - 22301074 116911263 MODEL JAAIVD010000005;XM_032915168;XM_032915169 XP_032771059;XP_032771060 paired mesoderm homeobox protein 1 protein-coding 625977506 Slc10a1 solute carrier family 10 member 1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); bile acid:sodium symporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cellular response to xenobiotic stimulus (ortholog); response to estrogen (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 7 95174213 95186115 - 22301074;30032202 116905231 MODEL JAAIVD010000026;XM_032908052 XP_032763943 sodium/bile acid cotransporter protein-coding 625977515 LOC116895538 TD and POZ domain-containing protein 4-like 3 120728320 120729401 + 116895538 MODEL JAAIVD010000012 pseudo 625977516 Gata1 GATA binding protein 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); basophil differentiation (ortholog); cell development (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); acute myeloid leukemia (ortholog); Altitude Sickness (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) X 15363902 15367198 - 22301074;30032202 116889070 MODEL JAAIVD010000014;XM_032890253 XP_032746144 erythroid transcription factor protein-coding 625977523 Nup210l nucleoporin 210 like INVOLVED IN Sertoli cell development (ortholog); spermatid development (ortholog); ASSOCIATED WITH Spermatogenic Failure 97 (ortholog) 3 63431640 63537990 - 30032202 116896619 MODEL JAAIVD010000012;XM_032897883 XP_032753774 nuclear pore membrane glycoprotein 210-like protein-coding 625977565 Ddx43 DEAD-box helicase 43 8 72580525 72609117 + 22301074;30032202 116907660 MODEL JAAIVD010000027;XM_032910752 XP_032766643 probable ATP-dependent RNA helicase DDX43 protein-coding 625977585 Psmg2 proteasome assembly chaperone 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH proteosome-associated autoinflammatory syndrome 4 (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog) 15 63620728 63636697 - 30032202 116884795 MODEL JAAIVD010000010;XM_032886030 XP_032741921 protein-coding 625977596 LOC116890242 olfactory receptor 11A1-like 1 271314532 271315464 + 22301074 116890242 MODEL JAAIVD010000025;XM_032890970 XP_032746861 protein-coding 625977599 LOC116901677 ribosome biogenesis protein NSA2 homolog 5 80155012 80157620 - 116901677 MODEL JAAIVD010000023 pseudo 625977600 LOC116887647 AT-rich interactive domain-containing protein 5B-like 18 18557947 18645183 + 30032202 116887647 MODEL JAAIVD010000013;XM_032889235 XP_032745126 protein-coding 625977607 Toe1 target of EGR1, exonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); snRNA binding (ortholog); INVOLVED IN snRNA 3'-end processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); pontocerebellar hypoplasia (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 1 40440429 40443987 - 22301074;30032202 116898489 MODEL JAAIVD010000025;XM_032899733 XP_032755624 target of EGR1 protein 1 protein-coding 625977620 LOC116904479 40S ribosomal protein S6-like 6 141732216 141743989 + 116904479 MODEL JAAIVD010000024 pseudo 625977621 Nop14 NOP14 nucleolar protein ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 11 70397740 70418738 + 22301074;30032202 116911943 MODEL JAAIVD010000006;XM_032915844 XP_032771735 nucleolar protein 14 protein-coding 625977643 Lss lanosterol synthase ENCODES a protein that exhibits lanosterol synthase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alopecia-mental retardation syndrome 4 (ortholog); cataract (ortholog); cataract 44 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 8 106591950 106619854 - 22301074;30032202 116907854 MODEL JAAIVD010000027;XM_032911044 XP_032766935 protein-coding 625977669 LOC116895590 heat shock cognate 71 kDa protein-like 3 146178169 146180073 - 116895590 MODEL JAAIVD010000012 pseudo 625977670 Znf609 zinc finger protein 609 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN positive regulation of neuron migration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of myoblast proliferation (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 60004341 60137991 - 30032202 116907443 MODEL JAAIVD010000027;XM_032910414;XM_032910415 XP_032766305;XP_032766306 protein-coding 625977687 LOC116910613 60S ribosomal protein L7a-like 9 23419306 23420103 + 116910613 MODEL JAAIVD010000002 pseudo 625977688 LOC116908055 uncharacterized LOC116908055 8 38791085 38794584 + 116908055 MODEL JAAIVD010000027;XR_004388870 ncrna 625977693 LOC116895062 small nucleolar RNA SNORA17 2 41797541 41797663 - 116895062 MODEL JAAIVD010000001 pseudo 625977694 Ptges3 prostaglandin E synthase 3 ENCODES a protein that exhibits DNA polymerase binding (ortholog); enzyme binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); cyclooxygenase pathway (ortholog); fibroblast proliferation (ortholog); PARTICIPATES IN aldosterone signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 1 155539577 155557116 + 30032202 116905857 MODEL JAAIVD010000025;XM_032908842 XP_032764733 protein-coding 625977706 Ccdc78 coiled-coil domain containing 78 INVOLVED IN de novo centriole assembly involved in multi-ciliated epithelial cell differentiation (ortholog); skeletal muscle contraction (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); centronuclear myopathy 4 (ortholog); congenital structural myopathy (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); deuterosome (ortholog) 9 3050734 3056423 + 30032202 116909146 MODEL JAAIVD010000002;XM_032912631 XP_032768522 coiled-coil domain-containing protein 78 protein-coding 625977722 LOC116890005 olfactory receptor 9 1 183892095 183893033 + 22301074 116890005 MODEL JAAIVD010000025;XM_032890790 XP_032746681 protein-coding 625977725 Yae1 YAE1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog) 14 36810406 36816931 - 116883599 MODEL JAAIVD010000009;XM_032884781 XP_032740672 protein YAE1 homolog protein-coding 625977732 Gpr17 G protein-coupled receptor 17 ENCODES a protein that exhibits receptor serine/threonine kinase binding (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); oligodendrocyte differentiation (ortholog); ASSOCIATED WITH brain infarction (ortholog); Hypercholesterolemia (ortholog); Insulin Resistance (ortholog) 15 12287971 12290159 + 22301074;30032202 116884272 MODEL JAAIVD010000010;XM_032885356 XP_032741247 uracil nucleotide/cysteinyl leukotriene receptor protein-coding 625977737 Rnf11 ring finger protein 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN ubiquitin ligase complex (ortholog) 1 45384780 45408061 + 116898953 MODEL JAAIVD010000025;XM_032900373 XP_032756264 protein-coding 625977744 LOC116915231 DNA repair protein RAD51 homolog 1-like 14 27211290 27212197 + 116915231 MODEL JAAIVD010000009 pseudo 625977745 Ddx47 DEAD-box helicase 47 INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); RNA splicing (ortholog); rRNA processing (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleolus (ortholog) 6 14425476 14437668 - 22301074 116903164 MODEL JAAIVD010000024;XM_032905531 XP_032761422 probable ATP-dependent RNA helicase DDX47 protein-coding 625977761 Myl1 myosin light chain 1 ENCODES a protein that exhibits structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); muscle contraction (ortholog); ASSOCIATED WITH congenital myopathy 14 (ortholog); Heart Injuries (ortholog); FOUND IN contractile muscle fiber (ortholog); myofibril (ortholog) 4 139919487 139938935 + 22301074;30032202 116898209 MODEL JAAIVD010000003;XM_032899568;XM_032899569;XM_032899570 XP_032755459;XP_032755460;XP_032755461 myosin light chain 1/3, skeletal muscle isoform protein-coding 625977777 Dnmt1 DNA methyltransferase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA (cytosine-5-)-methyltransferase activity (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to bisphenol A (ortholog); cellular response to lead ion (ortholog); PARTICIPATES IN DNA modification pathway; glycine N-methyltransferase deficiency pathway; homocysteine metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); alopecia areata (ortholog); FOUND IN female germ cell nucleus (ortholog); germ cell nucleus (ortholog); heterochromatin (ortholog) 8 17168919 17213593 - 22301074;30032202;9878564 116906812 MODEL AB012214;JAAIVD010000027;XM_032909689 BAA37118;XP_032765580 DNA (cytosine-5)-methyltransferase 1;DNA cytosine 5 methyltransferase protein-coding 625977819 Slc28a1 solute carrier family 28 member 1 ENCODES a protein that exhibits azole transmembrane transporter activity (ortholog); pyrimidine nucleobase transmembrane transporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); INVOLVED IN azole transmembrane transport (ortholog); cytidine transport (ortholog); nucleoside import across plasma membrane (ortholog); PARTICIPATES IN capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); High Myopia (ortholog); Uridine-Cytidineuria (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cytosol (ortholog) 2 119090960 119128571 - 22301074;30032202 116894268 MODEL JAAIVD010000001;XM_032895978 XP_032751869 sodium/nucleoside cotransporter 1 protein-coding 625977838 Crym crystallin mu ENCODES a protein that exhibits delta1-piperideine-2-carboxylate reductase activity (ortholog); hormone binding (ortholog); NADP binding (ortholog); INVOLVED IN mitochondrial transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); response to hormone (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 40 (ortholog); congestive heart failure (ortholog); Deafness (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 2 81494094 81509349 + 30032202 116891584 MODEL JAAIVD010000001;XM_032892764 XP_032748655 ketimine reductase mu-crystallin protein-coding 625977850 Rev3l REV3 like, DNA directed polymerase zeta catalytic subunit INVOLVED IN DNA repair (ortholog); error-prone translesion synthesis (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); zeta DNA polymerase complex (ortholog) 18 39535642 39691188 + 22301074;30032202 116887026 MODEL JAAIVD010000013;XM_032888520 XP_032744411 DNA polymerase zeta catalytic subunit protein-coding 625977886 LOC116906398 small nucleolar RNA SNORD113/SNORD114 family 7 127270842 127270904 + 116906398 MODEL JAAIVD010000026 pseudo 625977887 LOC116909394 40S ribosomal protein S4, X isoform-like 9 38424105 38424856 + 116909394 MODEL JAAIVD010000002 pseudo 625977888 Scn5a sodium voltage-gated channel alpha subunit 5 ENCODES a protein that exhibits ankyrin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); AV node cell action potential (ortholog); AV node cell to bundle of His cell communication (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); atrial standstill 1 (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 8 110720187 110818278 - 22301074;30032202 116907917 MODEL JAAIVD010000027;XM_032911120;XM_032911121;XM_032911122;XM_032911123;XM_032911124;XM_032911125;XM_032911126;XM_032911127;XM_032911128 XP_032767011;XP_032767012;XP_032767013;XP_032767014;XP_032767015;XP_032767016;XP_032767017;XP_032767018;XP_032767019 sodium channel protein type 5 subunit alpha protein-coding 625977932 P3h4 prolyl 3-hydroxylase family member 4 (inactive) INVOLVED IN bone remodeling (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); FOUND IN catalytic complex (ortholog); endoplasmic reticulum (ortholog); synaptonemal complex (ortholog) 9 59711486 59717318 - 22301074;30032202 116909996 MODEL JAAIVD010000002;XM_032913781 XP_032769672 endoplasmic reticulum protein SC65 protein-coding 625977944 Ngrn neugrin, neurite outgrowth associated ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN intercellular bridge (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 2 119983067 119989281 - 30032202 116891925 MODEL JAAIVD010000001;XM_032893357;XM_032893358;XR_004386869 XP_032749248;XP_032749249 neugrin protein-coding 625977958 LOC116904732 small nucleolar RNA SNORA17 6 23783886 23784013 - 116904732 MODEL JAAIVD010000024;XR_004388422 snorna 625977961 LOC116883203 sorbitol dehydrogenase-like 14 40898775 40906946 - 116883203 MODEL JAAIVD010000009 pseudo 625977962 LOC116911890 U6 spliceosomal RNA 10 21336814 21336925 + 116911890 MODEL JAAIVD010000005;XR_004389400 snrna 625977965 LOC116904552 killer cell lectin-like receptor 4 6 17679120 17699132 + 116904552 MODEL JAAIVD010000024 pseudo 625977966 Cdk4 cyclin dependent kinase 4 ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to interleukin-4 (ortholog); cellular response to ionomycin (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Brain Neoplasms (ortholog); Brain Stem Neoplasms (ortholog); FOUND IN bicellular tight junction (ortholog); chromatin (ortholog); cyclin D1-CDK4 complex (ortholog) 1 205492306 205496087 + 22301074;30032202 116909810 MODEL JAAIVD010000025;XM_032913514;XM_032913522 XP_032769405;XP_032769413 cyclin-dependent kinase 4 protein-coding 625977979 LOC116900575 olfactory receptor 4F3/4F16/4F29 5 90322782 90323726 - 22301074 116900575 MODEL JAAIVD010000023;XM_032902298 XP_032758189 protein-coding 625977983 LOC116889552 U2 spliceosomal RNA X 63394972 63395123 + 116889552 MODEL JAAIVD010000014 pseudo 625977984 LOC116900505 60S ribosomal protein L38-like 5 73301372 73301687 + 116900505 MODEL JAAIVD010000023 pseudo 625977985 Tubg1 tubulin gamma 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN meiotic spindle organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); complex cortical dysplasia with other brain malformations 4 (ortholog); COVID-19 (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); centriole (ortholog) 9 60415169 60421807 + 22301074;30032202 116910610 MODEL JAAIVD010000002;XM_032914557 XP_032770448 tubulin gamma-1 chain protein-coding 625978000 LOC116900363 double-strand-break repair protein rad21 homolog 5 69370271 69372041 - 116900363 MODEL JAAIVD010000023 pseudo 625978001 Ccdc167 coiled-coil domain containing 167 18 4147043 4163827 + 116887570 MODEL JAAIVD010000013;XM_032889190 XP_032745081 coiled-coil domain-containing protein 167 protein-coding 625978009 LOC116913204 uncharacterized LOC116913204 12 67798036 67813959 - 116913204 MODEL JAAIVD010000007;XM_032917387 XP_032773278 uncharacterized protein LOC116913204 protein-coding 625978015 Rpl6 ribosomal protein L6 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 16 32615644 32620289 - 22301074 116885520 MODEL JAAIVD010000004;XM_032886815 XP_032742706 60S ribosomal protein L6 protein-coding 625978026 LOC116883738 protein CTLA-2-beta-like 14 77276247 77278159 + 116883738 MODEL JAAIVD010000009;XM_032884969;XR_004385780 XP_032740860 protein-coding 625978037 Mgll monoglyceride lipase ENCODES a protein that exhibits hydrolase activity (ortholog); monoacylglycerol lipase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); arachidonate metabolic process (ortholog); long-term synaptic depression (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); cocaine dependence (ortholog); FOUND IN axon (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); cytosol (ortholog) 6 57502268 57603999 - 30032202 116903521 MODEL JAAIVD010000024;XM_032906129;XM_032906130;XM_032906131;XM_032906132 XP_032762020;XP_032762021;XP_032762022;XP_032762023 protein-coding 625978059 LOC116893716 olfactory receptor 5B12-like 2 13521179 13522126 + 22301074;30032202 116893716 MODEL JAAIVD010000001;XM_032895430 XP_032751321 protein-coding 625978063 Cdc23 cell division cycle 23 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH infertility (ortholog); FOUND IN anaphase-promoting complex (ortholog) 15 9702596 9721195 + 22301074;30032202 116884447 MODEL JAAIVD010000010;XM_032885542 XP_032741433 cell division cycle protein 23 homolog protein-coding 625978083 Trappc6a trafficking protein particle complex subunit 6A 2 171109661 171116234 - 22301074;30032202 116892527 MODEL JAAIVD010000001;XM_032894285 XP_032750176 trafficking protein particle complex 6A protein-coding 625978093 LOC116908709 CMRF35-like molecule 2 9 69086970 69094476 + 30032202 116908709 MODEL JAAIVD010000002;XM_032912046 XP_032767937 protein-coding 625978099 Rnf152 ring finger protein 152 ENCODES a protein that exhibits small GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); cellular response to starvation (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog); organelle membrane (ortholog) 10 90412687 90482462 + 22301074;30032202 116911221 MODEL JAAIVD010000005;XM_032915116;XM_032915117;XM_032915118 XP_032771007;XP_032771008;XP_032771009 E3 ubiquitin-protein ligase RNF152 protein-coding 625978111 LOC116884951 28S ribosomal protein S18b, mitochondrial-like 15 29080584 29082649 - 116884951 MODEL JAAIVD010000010 pseudo 625978112 Slc26a1 solute carrier family 26 member 1 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); oxalate transmembrane transporter activity (ortholog); solute:inorganic anion antiporter activity (ortholog); INVOLVED IN chloride transport (ortholog); oxalate transport (ortholog); sulfate transmembrane transport (ortholog); ASSOCIATED WITH calcium oxalate nephrolithiasis (ortholog); Calcium Oxalate Nephrolithiasis 1 (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 11 18461758 18465817 - 22301074;30032202 116912169 MODEL JAAIVD010000006;XM_032916095 XP_032771986 sulfate anion transporter 1 protein-coding 625978118 LOC116896042 40S ribosomal protein S28-like 3 195643216 195656688 - 22301074;30032202 116896042 MODEL JAAIVD010000012;XM_032897043 XP_032752934 protein-coding 625978122 Cct6b chaperonin containing TCP1 subunit 6B ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); FOUND IN chaperonin-containing T-complex (ortholog); cytosol (ortholog) 9 87749912 87795405 + 22301074;30032202 116909204 MODEL JAAIVD010000002;XM_032912700 XP_032768591 T-complex protein 1 subunit zeta-2 protein-coding 625978140 Carns1 carnosine synthase 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); carnosine synthase activity (ortholog); homocarnosine synthase activity (ortholog); INVOLVED IN carnosine biosynthetic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway 2 3468077 3477761 + 22301074;30032202 116890781 MODEL JAAIVD010000001;XM_032891250;XM_032891251 XP_032747141;XP_032747142 protein-coding 625978157 LOC116895589 uncharacterized LOC116895589 3 145284397 145340357 - 22301074;30032202 116895589 MODEL JAAIVD010000012;XM_032896816 XP_032752707 uncharacterized protein LOC116895589 protein-coding 625978188 Tmem119 transmembrane protein 119 INVOLVED IN BMP signaling pathway (ortholog); endochondral ossification (ortholog); negative regulation of bone resorption (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 16 40178059 40180097 + 22301074;30032202 116885366 MODEL JAAIVD010000004;XM_032886640 XP_032742531 protein-coding 625978193 LOC116905546 uncharacterized LOC116905546 7 9849258 9852324 - 116905546 MODEL JAAIVD010000026;XR_004388551 ncrna 625978199 Mesd mesoderm development LRP chaperone ENCODES a protein that exhibits identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN negative regulation of protein glycosylation (ortholog); ossification (ortholog); phagocytosis (ortholog); ASSOCIATED WITH osteogenesis imperfecta type 20 (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 2 116436377 116449656 - 22301074;30032202 116891882 MODEL JAAIVD010000001;XM_032893293;XM_032893294 XP_032749184;XP_032749185 LRP chaperone MESD protein-coding 625978209 LOC116896113 small proline-rich protein 2D 3 790242 790499 + 22301074 116896113 MODEL JAAIVD010000012;XM_032897077 XP_032752968 protein-coding 625978212 LOC116886730 small nucleolar RNA SNORA48 17 18036772 18036915 + 116886730 MODEL JAAIVD010000011;XR_004386140 snorna 625978215 Hsd17b10 hydroxysteroid 17-beta dehydrogenase 10 ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 3-hydroxy-2-methylbutyryl-CoA dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); brexanolone metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); azoospermia (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog) X 12745821 12748369 - 30032202 116889141 MODEL JAAIVD010000014;XM_032890313 XP_032746204 3-hydroxyacyl-CoA dehydrogenase type-2 protein-coding 625978225 Mllt6 MLLT6, PHD finger containing ENCODES a protein that exhibits histone binding (ortholog); nucleosome binding (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of urine volume (ortholog); positive regulation of sodium ion transport (ortholog) 9 56698690 56720015 - 30032202 116908640 MODEL JAAIVD010000002;XM_032911898 XP_032767789 protein AF-17 protein-coding 625978249 Bcr BCR activator of RhoGEF and GTPase ENCODES a protein that exhibits enzyme binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); brain development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); Blast Crisis (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 18 12267193 12394969 - 22301074;30032202 116886883 MODEL JAAIVD010000013;XM_032888340 XP_032744231 breakpoint cluster region protein protein-coding 625978275 Capn6 calpain 6 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of cytoskeleton organization (ortholog); ASSOCIATED WITH hypertension (ortholog); prostate cancer (ortholog); FOUND IN microtubule (ortholog); perinuclear region of cytoplasm (ortholog); spindle microtubule (ortholog) X 95821940 95839772 - 22301074;30032202 116889186 MODEL JAAIVD010000014;XM_032890346 XP_032746237 calpain-6 protein-coding 625978291 LOC116898361 transmembrane protein 126A-like 4 57641120 57644173 + 116898361 MODEL JAAIVD010000003 pseudo 625978292 Cdk13 cyclin dependent kinase 13 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); hemopoiesis (ortholog); negative regulation of stem cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autism spectrum disorder (ortholog); autosomal dominant Wolfram syndrome (ortholog); FOUND IN cyclin K-CDK13 complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 14 36574353 36663779 + 22301074;30032202 116883386 MODEL JAAIVD010000009;XM_032884506;XM_032884507 XP_032740397;XP_032740398 cyclin-dependent kinase 13 protein-coding 625978312 LOC116891998 40S ribosomal protein S29-like 2 134475200 134475494 + 116891998 MODEL JAAIVD010000001 pseudo 625978313 LOC116893085 nuclear pore complex protein Nup133-like 2 51535592 51538756 - 116893085 MODEL JAAIVD010000001 pseudo 625978314 LOC116890604 small nucleolar RNA SNORA26 1 118863447 118863567 + 116890604 MODEL JAAIVD010000025;XR_004386755 snorna 625978317 Cmip c-Maf inducing protein INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 36906850 37112484 + 30032202 116886459 MODEL JAAIVD010000011;XM_032887960 XP_032743851 C-Maf-inducing protein protein-coding 625978342 Carhsp1 calcium regulated heat stable protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN regulation of mRNA stability (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog); P granule (ortholog) 9 13361391 13374940 + 30032202 116910439 MODEL JAAIVD010000002;XM_032914287;XM_032914288 XP_032770178;XP_032770179 calcium-regulated heat-stable protein 1 protein-coding 625978353 LOC116910296 histidine triad nucleotide-binding protein 1-like 9 46497882 46498243 + 116910296 MODEL JAAIVD010000002 pseudo 625978354 Tpo thyroid peroxidase ENCODES a protein that exhibits iodide peroxidase activity (ortholog); INVOLVED IN cellular response to nitric oxide (ortholog); embryonic hemopoiesis (ortholog); response to lipid (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH autoimmune disease (ortholog); congenital hypothyroidism (ortholog); Congenital Nongoitrous Hypothyroidism (ortholog); FOUND IN cell surface (ortholog) 7 43494061 43556229 - 22301074;30032202 116905659 MODEL JAAIVD010000026;XM_032908631 XP_032764522 protein-coding 625978375 Fnbp1l formin binding protein 1 like ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN cilium assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 3 37202625 37301464 + 22301074 116896297 MODEL JAAIVD010000012;XM_032897380;XM_032897381;XM_032897382;XM_032897384 XP_032753271;XP_032753272;XP_032753273;XP_032753275 formin-binding protein 1-like protein-coding 625978401 Adamts2 ADAM metallopeptidase with thrombospondin type 1 motif 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); lung development (ortholog); protein processing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome dermatosparaxis type (ortholog); FOUND IN extracellular matrix (ortholog) 9 33261095 33461782 + 22301074;30032202 116909670 MODEL JAAIVD010000002;XM_032913325 XP_032769216 A disintegrin and metalloproteinase with thrombospondin motifs 2 protein-coding 625978427 LOC116900506 uncharacterized LOC116900506 5 75174948 75257649 + 116900506 MODEL JAAIVD010000023;XR_004387932 ncrna 625978432 Mlycd malonyl-CoA decarboxylase ENCODES a protein that exhibits identical protein binding (ortholog); malonyl-CoA decarboxylase activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); fatty acid biosynthetic process (ortholog); fatty acid oxidation (ortholog); PARTICIPATES IN malonic aciduria pathway; methylmalonic aciduria, cobalamin-related pathway; propanoate metabolic pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); cardiomyopathy (ortholog); Cardiotoxicity (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 17 39040413 39056454 + 22301074;30032202 116886361 MODEL JAAIVD010000011;XM_032887823 XP_032743714 malonyl-CoA decarboxylase, mitochondrial protein-coding 625978441 LOC116908678 ubiquitin-conjugating enzyme E2 R2-like 1 159335560 159392067 + 30032202 116908678 MODEL JAAIVD010000025;XM_032912024 XP_032767915 protein-coding 625978449 LOC116906485 small nucleolar RNA SNORA79 7 104711932 104712074 - 116906485 MODEL JAAIVD010000026;XR_004388728 snorna 625978452 LOC116898444 exocrine gland-secreted peptide 1-like 4 95833735 95835763 - 22301074 116898444 MODEL JAAIVD010000003;XM_032899712 XP_032755603 protein-coding 625978456 Kcnb1 potassium voltage-gated channel subfamily B member 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN action potential (ortholog); cellular response to calcium ion (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 26 (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); cell surface (ortholog) 5 150791833 150879525 + 22301074;30032202 116902317 MODEL JAAIVD010000023;XM_032904764 XP_032760655 protein-coding 625978463 LOC116895841 40S ribosomal protein S6-like 3 82765985 82766710 - 116895841 MODEL JAAIVD010000012 pseudo 625978464 LOC116887789 U1 spliceosomal RNA 18 46089757 46089905 - 116887789 MODEL JAAIVD010000013 pseudo 625978465 Tshz3 teashirt zinc finger homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); kidney morphogenesis (ortholog); kidney smooth muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); CAKUT (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN growth cone (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 161867738 161940106 - 22301074;30032202 116892258 MODEL JAAIVD010000001;XM_032893839 XP_032749730 teashirt homolog 3 protein-coding 625978471 Nup133 nucleoporin 133 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); nephron development (ortholog); neural tube development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 8 (ortholog); nephrotic syndrome type 18 (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 17 43451589 43501145 - 22301074;30032202 116886394 MODEL JAAIVD010000011;XM_032887862;XR_004386102 XP_032743753 nuclear pore complex protein Nup133 protein-coding 625978504 Crybb1 crystallin beta B1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 17 multiple types (ortholog) 16 41706326 41720170 - 30032202 116885716 MODEL JAAIVD010000004;XM_032887024;XM_032887025;XM_032887026 XP_032742915;XP_032742916;XP_032742917 beta-crystallin B1 protein-coding 625978519 LOC116898272 PHD finger-like domain-containing protein 5A 4 164505591 164505951 + 116898272 MODEL JAAIVD010000003 pseudo 625978520 LOC116897590 small nucleolar RNA SNORA17 3 119869354 119869481 + 116897590 MODEL JAAIVD010000012;XR_004387593 snorna 625978523 Rrp1b ribosomal RNA processing 1B ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cellular response to virus (ortholog); negative regulation of GTPase activity (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); granular component (ortholog) 18 1807923 1831455 - 22301074;30032202 116887129 MODEL JAAIVD010000013;XM_032888677 XP_032744568 ribosomal RNA processing protein 1 homolog B protein-coding 625978543 LOC116897508 small nucleolar RNA SNORA44 3 135507000 135507111 - 116897508 MODEL JAAIVD010000012;XR_004387528 snorna 625978546 Rassf5 Ras association domain family member 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of lymphocyte proliferation (ortholog); positive regulation of protein ubiquitination (ortholog); regulation of protein localization to nucleus (ortholog); ASSOCIATED WITH Kidney Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); neuroblastoma (ortholog); FOUND IN nucleus (ortholog) 10 4567552 4631853 + 22301074;30032202 116911011 MODEL JAAIVD010000005;XM_032914740;XM_032914741 XP_032770631;XP_032770632 ras association domain-containing protein 5 protein-coding 625978559 LOC116900903 alpha-enolase-like 5 77562594 77563187 - 116900903 MODEL JAAIVD010000023 pseudo 625978560 LOC116886741 small nucleolar RNA SNORA17 17 23350432 23350563 - 116886741 MODEL JAAIVD010000011;XR_004386148 snorna 625978563 Hes1 hes family bHLH transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); aorta morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) 4 14946704 14949676 + 22301074;30032202 116898744 MODEL JAAIVD010000003;XM_032900059 XP_032755950 transcription factor HES-1 protein-coding 625978571 LOC116894006 olfactory receptor 51J1 2 101663338 101664291 - 22301074 116894006 MODEL JAAIVD010000001;XM_032895721 XP_032751612 protein-coding 625978574 Mtfr1 mitochondrial fission regulator 1 INVOLVED IN aerobic respiration (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 3 134768993 134803413 - 30032202 116897007 MODEL JAAIVD010000012;XM_032898613 XP_032754504 protein-coding 625978586 Ankrd27 ankyrin repeat domain 27 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); SNARE binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); endosome to melanosome transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH eosinophilic esophagitis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); late endosome (ortholog) 2 163025733 163077616 - 30032202 116892263 MODEL JAAIVD010000001;XM_032893849 XP_032749740 ankyrin repeat domain-containing protein 27 protein-coding 625978619 LOC116905561 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like 7 70127303 70128830 + 22301074;30032202 116905561 MODEL JAAIVD010000026;XM_032908586 XP_032764477 protein-coding 625978623 LOC116898455 putative KHDC1-like protein 4 98739555 98743160 + 22301074;30032202 116898455 MODEL JAAIVD010000003;XM_032899715 XP_032755606 protein-coding 625978629 Map6d1 MAP6 domain containing 1 ENCODES a protein that exhibits calmodulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi-associated vesicle (ortholog) 4 5036200 5042041 - 22301074;30032202 116898687 MODEL JAAIVD010000003;XM_032899946 XP_032755837 MAP6 domain-containing protein 1 protein-coding 625978636 LOC116899830 small nucleolar RNA SNORA51 4 134759400 134759514 - 116899830 MODEL JAAIVD010000003 pseudo 625978637 LOC116896730 uncharacterized LOC116896730 3 68083685 68098411 + 116896730 MODEL JAAIVD010000012;XR_004387361 ncrna 625978644 LOC116887608 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9485178 9492359 + 116887608 MODEL JAAIVD010000013 pseudo 625978645 LOC116894659 vascular non-inflammatory molecule 3 2 209924964 209937152 + 22301074 116894659 MODEL JAAIVD010000001;XM_032896363 XP_032752254 protein-coding 625978656 Tp53inp1 tumor protein p53 inducible nuclear protein 1 ENCODES a protein that exhibits antioxidant activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to ethanol (ortholog); cellular response to hydroperoxide (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleus (ortholog) 1 132529888 132548101 - 30032202 116903432 MODEL JAAIVD010000025;XM_032905986;XM_032905994;XM_032906002 XP_032761877;XP_032761885;XP_032761893 tumor protein p53-inducible nuclear protein 1 protein-coding 625978671 LOC116883907 ubiquitin-conjugating enzyme E2 L3-like 14 184690 185107 + 116883907 MODEL JAAIVD010000009 pseudo 625978672 Nip7 nucleolar pre-rRNA processing protein NIP7 FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 17 26783960 26786337 + 22301074;30032202 116886636 MODEL JAAIVD010000011;XM_032888141 XP_032744032 60S ribosome subunit biogenesis protein NIP7 homolog protein-coding 625978681 Elovl7 ELOVL fatty acid elongase 7 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); very long-chain fatty acid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 188679030 188747570 - 22301074;30032202 116897207 MODEL JAAIVD010000012;XM_032898914;XM_032898915 XP_032754805;XP_032754806 elongation of very long chain fatty acids protein 7 protein-coding 625978696 Syt4 synaptotagmin 4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); clathrin binding (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); memory (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); melanoma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); dendrite (ortholog) 15 42358362 42367739 - 22301074;30032202 116884478 MODEL JAAIVD010000010;XM_032885594 XP_032741485 synaptotagmin-4 protein-coding 625978704 LOC116910898 60S ribosomal protein L7a-like 10 43945092 43945929 - 116910898 MODEL JAAIVD010000005 pseudo 625978705 LOC116901008 zinc finger and SCAN domain-containing protein 5B-like 5 112793683 112864599 - 116901008 MODEL JAAIVD010000023 pseudo 625978706 Ccna2 cyclin A2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell cycle G1/S phase transition (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN G1/S transition pathway; p53 signaling pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); COVID-19 (ortholog); FOUND IN cyclin A2-CDK1 complex (ortholog); cyclin A2-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 3 117415041 117421426 + 22301074;30032202 116896928 MODEL JAAIVD010000012;XM_032898497;XM_032898498 XP_032754388;XP_032754389 cyclin-A2 protein-coding 625978722 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889702 MODEL JAAIVD010000052 trna 625978723 Nup85 nucleoporin 85 INVOLVED IN chemotaxis (ortholog); lamellipodium assembly (ortholog); macrophage chemotaxis (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH nephrotic syndrome type 17 (ortholog); FOUND IN actin cytoskeleton (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 9 68515293 68534328 - 30032202 116909685 MODEL JAAIVD010000002;XM_032913345 XP_032769236 nuclear pore complex protein Nup85 protein-coding 625978746 Lgals12 galectin 12 ENCODES a protein that exhibits lactose binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 2 147564 157431 + 30032202 116894788 MODEL JAAIVD010000001;XM_032896438 XP_032752329 galectin-12 protein-coding 625978759 Spata9 spermatogenesis associated 9 3 221194107 221224857 - 116897361 MODEL JAAIVD010000012;XM_032899120 XP_032755011 spermatogenesis-associated protein 9 protein-coding 625978767 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41353532 41353604 + 116884215 MODEL JAAIVD010000009 trna 625978768 Kcna3 potassium voltage-gated channel subfamily A member 3 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); optic nerve development (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); glutamatergic synapse (ortholog) 3 51219111 51222235 - 22301074;2555158;30032202 116896395 MODEL JAAIVD010000012;X16001;XM_032897532 CAA34132;XP_032753423 protein-coding 625978773 Alkbh6 alkB homolog 6 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog) 2 165692976 165698221 - 116892324 MODEL JAAIVD010000001;XM_032893950 XP_032749841 alpha-ketoglutarate-dependent dioxygenase alkB homolog 6 protein-coding 625978784 Pbxip1 PBX homeobox interacting protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN articular cartilage development (ortholog); cell adhesion (ortholog); cell migration (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); COVID-19 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 64216360 64229219 - 116896638 MODEL JAAIVD010000012;XM_032897955 XP_032753846 pre-B-cell leukemia transcription factor-interacting protein 1 protein-coding 625978799 LOC116898188 aldehyde oxidase 4 4 134121829 134186493 - 22301074;30032202 116898188 MODEL JAAIVD010000003;XM_032899552 XP_032755443 protein-coding 625978836 LOC116893983 tripartite motif-containing protein 30A-like 2 101357760 101378567 + 22301074 116893983 MODEL JAAIVD010000001;XM_032895699 XP_032751590 protein-coding 625978846 Skic8 SKI8 subunit of superkiller complex INVOLVED IN negative regulation of myeloid cell differentiation (ortholog); nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); rescue of stalled ribosome (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN Cdc73/Paf1 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 48784879 48803731 - 22301074;30032202 116906810 MODEL JAAIVD010000027;XM_032909684;XM_032909685;XM_032909686;XM_032909688 XP_032765575;XP_032765576;XP_032765577;XP_032765579 Wdr61 WD repeat domain 61;WD repeat-containing protein 61 protein-coding 625978871 Zmym4 zinc finger MYM-type containing 4 INVOLVED IN cytoskeleton organization (ortholog); regulation of cell morphogenesis (ortholog) 1 31331699 31448611 + 22301074 116896545 MODEL JAAIVD010000025;XM_032897737 XP_032753628 zinc finger MYM-type protein 4 protein-coding 625978905 LOC116909663 ATP-binding cassette sub-family A member 8-B-like 9 79296392 79346102 + 22301074;30032202 116909663 MODEL JAAIVD010000002;XM_032913316 XP_032769207 protein-coding 625978946 LOC116889241 uncharacterized LOC116889241 X 8141164 8145114 + 116889241 MODEL JAAIVD010000014;XR_004386369 ncrna 625978950 LOC116906344 U7 small nuclear RNA 7 58874116 58874174 + 116906344 MODEL JAAIVD010000026;XR_004388624 snrna 625978953 Retreg1 reticulophagy regulator 1 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN autophagy (ortholog); collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); hereditary sensory and autonomic neuropathy type 2 (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 154834423 154867862 - 30032202 116897066 MODEL JAAIVD010000012;XM_032898691 XP_032754582 protein-coding 625978964 Kifap3 kinesin associated protein 3 ENCODES a protein that exhibits intraciliary transport particle B binding (ortholog); kinesin binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); intracellular protein localization (ortholog); microtubule-based process (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 10 43011944 43134689 + 30032202 116911472 MODEL JAAIVD010000005;XM_032915455;XM_032915456 XP_032771346;XP_032771347 kinesin-associated protein 3 protein-coding 625978991 LOC116893405 barH-like 1 homeobox protein 2 173284227 173291263 - 22301074;30032202 116893405 MODEL JAAIVD010000001;XM_032895190 XP_032751081 protein-coding 625978996 Myom1 myomesin 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN extraocular skeletal muscle development (ortholog); positive regulation of gene expression (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiac arrest (ortholog); cardiomyopathy (ortholog); FOUND IN M band (ortholog); sarcomere (ortholog) 4 180488447 180601631 + 22301074 116899714 MODEL JAAIVD010000003;XM_032901751;XM_032901752;XM_032901753;XM_032901754 XP_032757642;XP_032757643;XP_032757644;XP_032757645 myomesin-1 protein-coding 625979041 LOC116902818 putative vomeronasal receptor-like protein 4 6 84058455 84059367 - 116902818 MODEL JAAIVD010000024 pseudo 625979042 Srf serum response factor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); associative learning (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 4 83307697 83316986 + 22301074;30032202 116899106 MODEL JAAIVD010000003;XM_032900623;XM_032900624 XP_032756514;XP_032756515 protein-coding 625979056 LOC116892748 zinc finger protein 54-like 2 180886813 180902635 + 30032202 116892748 MODEL JAAIVD010000001;XM_032894626 XP_032750517 protein-coding 625979064 Pycr1 pyrroline-5-carboxylate reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); L-proline biosynthetic process (ortholog); negative regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Autosomal Recessive Cutis Laxa (ortholog); autosomal recessive cutis laxa type IIB (ortholog); autosomal recessive cutis laxa type IIIB (ortholog); FOUND IN mitochondrion (ortholog) 9 63378835 63383475 + 22301074;30032202 116910110 MODEL JAAIVD010000002;XM_032913941 XP_032769832 pyrroline-5-carboxylate reductase 1, mitochondrial protein-coding 625979077 Zfr2 zinc finger RNA binding protein 2 ASSOCIATED WITH obesity (ortholog) 1 153639079 153657932 - 22301074;30032202 116904511 MODEL JAAIVD010000025;XM_032907303 XP_032763194 zinc finger RNA-binding protein 2 protein-coding 625979099 LOC116899917 small nucleolar RNA SNORD2 4 7899325 7899393 + 116899917 MODEL JAAIVD010000003;XR_004387889 snorna 625979102 LOC116897481 small nucleolar RNA SNORD22 3 90944026 90944154 + 116897481 MODEL JAAIVD010000012;XR_004387505 snorna 625979105 LOC116887890 melanoma-associated antigen B5-like X 51008404 51009411 + 30032202 116887890 MODEL JAAIVD010000014;XM_032889369 XP_032745260 protein-coding 625979108 LOC116897750 sperm-associated antigen 6 4 1956563 2018706 + 30032202 116897750 MODEL JAAIVD010000003;XM_032899184 XP_032755075 protein-coding 625979121 LOC116908348 small nucleolar RNA SNORD18 8 58482046 58482116 + 116908348 MODEL JAAIVD010000027;XR_004388899 snorna 625979124 LOC116889466 small nucleolar RNA SNORA70 X 128828086 128828210 - 116889466 MODEL JAAIVD010000014 pseudo 625979125 LOC116894423 keratin-associated protein 20-2-like 2 158836773 158836931 - 116894423 MODEL JAAIVD010000001;XM_032896127 XP_032752018 protein-coding 625979128 Faxdc2 fatty acid hydroxylase domain containing 2 INVOLVED IN positive regulation of megakaryocyte differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog) 9 40144527 40169418 + 22301074;30032202 116910043 MODEL JAAIVD010000002;XM_032913830 XP_032769721 fatty acid hydroxylase domain-containing protein 2 protein-coding 625979140 LOC116887722 small nucleolar RNA SNORA17 18 39905570 39905692 + 116887722 MODEL JAAIVD010000013 pseudo 625979141 Nol3 nucleolar protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); caspase binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cardiac muscle cell apoptotic process (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Myoclonus (ortholog); Familial Myoclonus 1 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 17 25003375 25007662 + 30032202 116886366 MODEL JAAIVD010000011;XM_032887827 XP_032743718 protein-coding 625979148 LOC116911841 small nucleolar RNA SNORA17 10 41457875 41457946 + 116911841 MODEL JAAIVD010000005 pseudo 625979149 Pms2 PMS1 homolog 2, mismatch repair system component ENCODES a protein that exhibits DNA binding (ortholog); MutSalpha complex binding (ortholog); single base insertion or deletion binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); mismatch repair (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN cytosol (ortholog); MutLalpha complex (ortholog); nucleoplasm (ortholog) 16 9244955 9268632 - 22301074;30032202 116885869 MODEL JAAIVD010000004;XM_032887195 XP_032743086 mismatch repair endonuclease PMS2 protein-coding 625979169 Psmb3 proteasome 20S subunit beta 3 FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) 9 56673145 56680402 - 22301074 116908807 MODEL JAAIVD010000002;XM_032912212 XP_032768103 proteasome subunit beta type-3 protein-coding 625979179 LOC116884676 RNA-binding protein 27 15 69416741 69420387 - 22301074;30032202 116884676 MODEL JAAIVD010000010;XM_032885849;XM_032885850;XM_032885851 XP_032741740;XP_032741741;XP_032741742 protein-coding 625979191 Hspa8 heat shock protein family A (Hsp70) member 8 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); axo-dendritic transport (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN asymmetric synapse (ortholog); autophagosome (ortholog); axon (ortholog) 8 35401907 35405851 + 22301074;30032202 116908051 MODEL JAAIVD010000027;XM_032911324 XP_032767215 heat shock cognate 71 kDa protein protein-coding 625979204 LOC116905808 phosphomannomutase 1-like 7 9967997 9968731 - 116905808 MODEL JAAIVD010000026 pseudo 625979205 G6pc3 glucose-6-phosphatase catalytic subunit 3 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose 6-phosphate metabolic process (ortholog); glucose-6-phosphate transport (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH COVID-19 (ortholog); Dursun Syndrome (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 61486619 61490926 + 30032202 116909809 MODEL JAAIVD010000002;XM_032913508;XM_032913509 XP_032769399;XP_032769400 glucose-6-phosphatase 3 protein-coding 625979218 LOC116899811 small nucleolar RNA SNORA70 4 40168257 40168394 - 116899811 MODEL JAAIVD010000003;XR_004387812 snorna 625979221 LOC116906771 baculoviral IAP repeat-containing protein 2 8 4018971 4035636 - 22301074;30032202 116906771 MODEL JAAIVD010000027;XM_032909614 XP_032765505 protein-coding 625979232 Lbhd2 LBH domain containing 2 7 128981187 128986083 + 116905916 MODEL JAAIVD010000026;XM_032908903 XP_032764794 LBH domain-containing protein 2 protein-coding 625979240 LOC116908152 uncharacterized LOC116908152 8 35006380 35131238 - 116908152 MODEL JAAIVD010000027;XM_032911455 XP_032767346 uncharacterized protein LOC116908152 protein-coding 625979247 Rapgef2 Rap guanine nucleotide exchange factor 2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); cAMP binding (ortholog); cGMP binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); blood vessel development (ortholog); PARTICIPATES IN adenosine signaling pathway; ASSOCIATED WITH familial adult myoclonic epilepsy 7 (ortholog); Myoclonic Epilepsies (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 3 74112626 74327233 + 22301074;30032202 116896767 MODEL JAAIVD010000012;XM_032898221;XM_032898222;XM_032898223;XM_032898225;XM_032898226 XP_032754112;XP_032754113;XP_032754114;XP_032754116;XP_032754117 protein-coding 625979293 Mpnd MPN domain containing ASSOCIATED WITH COVID-19 (ortholog) 4 87399896 87406791 + 22301074;30032202 116899164 MODEL JAAIVD010000003;XM_032900727;XM_032900728;XM_032900729;XR_004387692 XP_032756618;XP_032756619;XP_032756620 MPN domain-containing protein protein-coding 625979325 Uchl5 ubiquitin C-terminal hydrolase L5 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); endopeptidase inhibitor activity (ortholog); proteasome binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); forebrain morphogenesis (ortholog); lateral ventricle development (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); Experimental Diabetes Mellitus (ortholog); Testis Reperfusion Injury (ortholog); FOUND IN cytosol (ortholog); cytosolic proteasome complex (ortholog); Ino80 complex (ortholog) 10 23696673 23738834 + 22301074;30032202 116911116 MODEL JAAIVD010000005;XM_032914960;XM_032914961;XM_032914962;XM_032914963;XR_004389314 XP_032770851;XP_032770852;XP_032770853;XP_032770854 ubiquitin carboxyl-terminal hydrolase isozyme L5 protein-coding 625979351 Cfap44 cilia and flagella associated protein 44 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH spermatogenic failure 20 (ortholog) 4 29280868 29361123 + 22301074 116898865 MODEL JAAIVD010000003;XM_032900232 XP_032756123 cilia- and flagella-associated protein 44 protein-coding 625979390 Cptp ceramide-1-phosphate transfer protein ENCODES a protein that exhibits ceramide 1-phosphate binding (ortholog); ceramide 1-phosphate transfer activity (ortholog); phospholipid binding (ortholog); INVOLVED IN ceramide 1-phosphate transport (ortholog); glycolipid transport (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytosol (ortholog) 1 4760161 4764350 + 22301074;30032202 116891691 MODEL JAAIVD010000025;XM_032892961 XP_032748852 protein-coding 625979397 LOC116895229 nucleoside diphosphate kinase B-like 3 20009837 20010243 + 116895229 MODEL JAAIVD010000012 pseudo 625979398 Ogt O-linked N-acetylglucosamine (GlcNAc) transferase ENCODES a protein that exhibits chromatin DNA binding (ortholog); identical protein binding (ortholog); peptide binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN DNA modification pathway; hexosamine biosynthetic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytosol (ortholog); euchromatin (ortholog) X 58824800 58867294 - 22301074;30032202 116887805 MODEL JAAIVD010000014;XM_032889331 XP_032745222 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit protein-coding 625979424 Wdr25 WD repeat domain 25 ASSOCIATED WITH long QT syndrome (ortholog) 7 126579429 126709516 + 22301074 116905459 MODEL JAAIVD010000026;XM_032908416;XM_032908417 XP_032764307;XP_032764308 WD repeat-containing protein 25 protein-coding 625979435 Xpo4 exportin 4 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN glycolytic process (ortholog); positive regulation of protein export from nucleus (ortholog); protein export from nucleus (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 67172857 67253609 + 22301074;30032202 116913129 MODEL JAAIVD010000007;XM_032917292;XM_032917293 XP_032773183;XP_032773184 exportin-4 protein-coding 625979465 Spmip3 sperm microtubule inner protein 3 10 56336485 56361392 + 116910990 MODEL JAAIVD010000005;XM_032914701;XM_032914702;XM_032914703 XP_032770592;XP_032770593;XP_032770594 C10H1orf100 chromosome 10 C1orf100 homolog;sperm associated microtubule inner protein 3;uncharacterized protein C1orf100 homolog protein-coding 625979482 Cep15 centrosomal protein 15 12 82354225 82374131 + 116913369 MODEL JAAIVD010000007;XM_032917533;XM_032917534;XM_032917535;XM_032917537;XM_032917538;XM_032917539 XP_032773424;XP_032773425;XP_032773426;XP_032773428;XP_032773429;XP_032773430 C12H3orf14 chromosome 12 C3orf14 homolog;uncharacterized protein C3orf14 homolog protein-coding 625979504 Trpc5 transient receptor potential cation channel subfamily C member 5 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron apoptotic process (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Albuminuria (ortholog); dilated cardiomyopathy 1H (ortholog); hypertension (ortholog); FOUND IN calcium channel complex (ortholog); dendrite (ortholog); growth cone (ortholog) X 96426252 96548815 + 22301074;30032202 116889334 MODEL JAAIVD010000014;XM_032890452 XP_032746343 short transient receptor potential channel 5 protein-coding 625979517 LOC116913930 tubulin alpha-1B chain-like 12 36611475 36612737 + 116913930 MODEL JAAIVD010000007 pseudo 625979518 LOC116905725 transmembrane protein 126A-like 7 185162 185554 + 116905725 MODEL JAAIVD010000026 pseudo 625979519 Nckipsd NCK interacting protein with SH3 domain INVOLVED IN positive regulation of neuron projection development (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN COP9 signalosome (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 8 100139917 100149063 + 22301074;30032202 116907620 MODEL JAAIVD010000027;XM_032910675 XP_032766566 NCK-interacting protein with SH3 domain protein-coding 625979536 Dhx33 DEAH-box helicase 33 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of NLRP3 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); NLRP3 inflammasome complex (ortholog); nucleolus (ortholog) 9 50608214 50627298 - 22301074;30032202 116909242 MODEL JAAIVD010000002;XM_032912746 XP_032768637 ATP-dependent RNA helicase DHX33 protein-coding 625979552 LOC116909116 C-C motif chemokine 4 9 87030600 87049199 - 22301074;30032202 116909116 MODEL JAAIVD010000002;XM_032912592 XP_032768483 protein-coding 625979560 Srsf1 serine and arginine rich splicing factor 1 ENCODES a protein that exhibits DNA topoisomerase binding (ortholog); mRNA binding (ortholog); protein kinase B binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cardiac muscle contraction (ortholog); cellular response to interleukin-17 (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); cervix uteri carcinoma in situ (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); exon-exon junction complex (ortholog) 9 82760214 82764254 - 30032202 116910588 MODEL JAAIVD010000002;XM_032914510;XM_032914511;XR_004389160 XP_032770401;XP_032770402 serine/arginine-rich splicing factor 1 protein-coding 625979574 Xpot exportin for tRNA ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear pore (ortholog) 1 200023837 200063798 - 22301074;30032202 116909534 MODEL JAAIVD010000025;XM_032913152 XP_032769043 exportin-T protein-coding 625979603 Zic2 Zic family zinc finger 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN axial mesoderm development (ortholog); central nervous system development (ortholog); central nervous system segmentation (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 12 2412573 2417436 - 30032202 116913514 MODEL JAAIVD010000007;XM_032917719 XP_032773610 Zic family member 2;zinc finger protein ZIC 2 protein-coding 625979610 LOC116913836 peptidyl-prolyl cis-trans isomerase FKBP3-like 12 2750474 2751176 + 116913836 MODEL JAAIVD010000007 pseudo 625979611 Hacl1 2-hydroxyacyl-CoA lyase 1 ENCODES a protein that exhibits 2-hydroxyacyl-CoA lyase activity (ortholog); ATP binding (ortholog); carbon-carbon lyase activity (ortholog); INVOLVED IN fatty acid alpha-oxidation (ortholog); fatty acid metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN phytanic acid degradation pathway; Refsum disease pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); congenital myasthenic syndrome 5 (ortholog); FOUND IN nucleoplasm (ortholog); peroxisome (ortholog) 13 7330052 7368192 - 22301074;30032202 116914690 MODEL JAAIVD010000008;XM_032919110 XP_032775001 protein-coding 625979632 LOC116894476 phosphoglycerate kinase 1-like 2 168857704 168858992 + 116894476 MODEL JAAIVD010000001 pseudo 625979633 LOC116914591 defensin 5 13 64733198 64734274 - 22301074;30032202 116914591 MODEL JAAIVD010000008;XM_032918952 XP_032774843 protein-coding 625979639 LOC116911301 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like 10 85401750 85401862 - 116911301 MODEL JAAIVD010000005 pseudo 625979640 Pde1c phosphodiesterase 1C ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); response to calcium ion (ortholog); sensory perception of smell (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 74 (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); lysosome (ortholog); neuronal cell body (ortholog) 6 84886516 84978783 + 22301074 116903748 MODEL JAAIVD010000024;XM_032906437 XP_032762328 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C protein-coding 625979660 LOC116888943 zinc finger protein 182-like X 2933223 2967619 + 30032202 116888943 MODEL JAAIVD010000014;XM_032890178 XP_032746069 protein-coding 625979667 LOC116883402 uncharacterized LOC116883402 14 28376197 28484365 + 116883402 MODEL JAAIVD010000009;XR_004385760 ncrna 625979672 Pdilt protein disulfide isomerase like, testis expressed ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN germ cell migration (ortholog); spermatid development (ortholog) 2 82149787 82181010 + 30032202 116893924 MODEL JAAIVD010000001;XM_032895644 XP_032751535 protein disulfide-isomerase-like protein of the testis protein-coding 625979688 Ccdc92 coiled-coil domain containing 92 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); nucleoplasm (ortholog) 16 29068560 29094986 + 30032202 116885450 MODEL JAAIVD010000004;XM_032886734;XR_004386009 XP_032742625 coiled-coil domain-containing protein 92 protein-coding 625979699 LOC116906746 cytochrome P450 4F4-like 1 157091391 157105474 + 22301074 116906746 MODEL JAAIVD010000025;XM_032909577 XP_032765468 protein-coding 625979714 LOC116895326 60S ribosomal protein L7-like 3 33916109 33916856 - 22301074;30032202 116895326 MODEL JAAIVD010000012;XM_032896634 XP_032752525 protein-coding 625979717 LOC116887102 keratin-associated protein 10-8-like 18 1112534 1113391 - 22301074;30032202 116887102 MODEL JAAIVD010000013;XM_032888634;XM_032888635 XP_032744525;XP_032744526 protein-coding 625979724 LOC116902540 small nucleolar RNA SNORA43 5 10448474 10448604 + 116902540 MODEL JAAIVD010000023;XR_004388143 snorna 625979727 Asdurf ASNSD1 upstream open reading frame FOUND IN RPAP3/R2TP/prefoldin-like complex (ortholog) 4 121859490 121868934 + 116899360 MODEL JAAIVD010000003;XM_032901069 XP_032756960 ASNSD1 upstream open reading frame protein;ASNSD1 upstream reading frame protein-coding 625979735 Gucy2f guanylate cyclase 2F, retinal ENCODES a protein that exhibits guanylate cyclase activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cGMP-mediated signaling (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH retinal degeneration (ortholog); FOUND IN plasma membrane (ortholog); rod photoreceptor outer segment (ortholog) X 94237490 94330466 - 22301074;30032202 116888857 MODEL JAAIVD010000014;XM_032890124 XP_032746015 retinal guanylyl cyclase 2 protein-coding 625979759 Atosa atos homolog A 8 69242289 69312213 + 116908319 MODEL JAAIVD010000027;XM_032911606;XM_032911607;XM_032911608;XM_032911609;XM_032911610;XM_032911611 XP_032767497;XP_032767498;XP_032767499;XP_032767500;XP_032767501;XP_032767502 Fam214a family with sequence similarity 214 member A;protein FAM214A protein-coding 625979792 Sec22b SEC22 homolog B, vesicle trafficking protein ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN negative regulation of autophagosome assembly (ortholog); positive regulation of protein catabolic process (ortholog); vesicle-mediated transport (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 3 59388779 59410930 - 30032202 116896484 MODEL JAAIVD010000012;XM_032897649 XP_032753540 vesicle-trafficking protein SEC22b protein-coding 625979801 Pip5k1b phosphatidylinositol-4-phosphate 5-kinase type 1 beta ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); INVOLVED IN phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN cytosol (ortholog); uropod (ortholog) 2 24415792 24690087 - 22301074 116891049 MODEL JAAIVD010000001;XM_032891738 XP_032747629 phosphatidylinositol 4-phosphate 5-kinase type-1 beta protein-coding 625979820 LOC116897961 leucine-rich repeat-containing protein 57-like 4 46566609 46567348 - 116897961 MODEL JAAIVD010000003 pseudo 625979821 LOC116906794 olfactory receptor 8B3-like 8 32221701 32222642 + 22301074;30032202 116906794 MODEL JAAIVD010000027;XM_032909660 XP_032765551 protein-coding 625979825 LOC116888238 uncharacterized protein C15orf39 homolog X 41433994 41437056 + 116888238 MODEL JAAIVD010000014 pseudo 625979826 Tapbpl TAP binding protein like ENCODES a protein that exhibits MHC class I protein complex binding (ortholog); INVOLVED IN negative regulation of antigen processing and presentation of peptide antigen via MHC class I (ortholog); peptide antigen assembly with MHC class I protein complex (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 22673071 22680557 + 116903253 MODEL JAAIVD010000024;XM_032905635 XP_032761526 tapasin-related protein protein-coding 625979837 LOC116885044 small nucleolar RNA SNORA17 15 11635073 11635203 + 116885044 MODEL JAAIVD010000010;XR_004385930 snorna 625979840 Bnip3 BCL2 interacting protein 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN autophagic cell death (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Intermittent Hypoxia (ortholog); chronic obstructive pulmonary disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) 2 62913006 62930228 + 22301074;30032202 116891369 MODEL JAAIVD010000001;XM_032892366 XP_032748257 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3 protein-coding 625979850 Cfap263 cilia and flagella associated protein 263 INVOLVED IN cilium assembly (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); protein-containing complex (ortholog) 17 2376127 2395742 + 30032202 116886260 MODEL JAAIVD010000011;XM_032887682 XP_032743573 Ccdc113 coiled-coil domain containing 113;coiled-coil domain-containing protein 113 protein-coding 625979863 Mmp9 matrix metallopeptidase 9 ENCODES a protein that exhibits endopeptidase activity (ortholog); fibronectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell migration (ortholog); cellular response to cell-matrix adhesion (ortholog); cellular response to cytokine stimulus (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog); extracellular space (ortholog) 5 153004445 153048368 - 22301074;30032202 116901088 MODEL JAAIVD010000023;XM_032902652 XP_032758543 matrix metalloproteinase-9 protein-coding 625979882 Nelfb negative elongation factor complex member B INVOLVED IN cell population proliferation (ortholog); negative regulation of stem cell differentiation (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; FOUND IN cytoplasm (ortholog); NELF complex (ortholog); nucleoplasm (ortholog) 5 11970116 11986272 + 22301074;30032202 116900029 MODEL JAAIVD010000023;XM_032901825 XP_032757716 negative elongation factor B protein-coding 625979898 LOC116890540 small nucleolar RNA SNORA17 1 227023628 227023759 + 116890540 MODEL JAAIVD010000025;XR_004386720 snorna 625979901 Cib1 calcium and integrin binding 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Epidermodysplasia Verruciformis 3 (ortholog); Huntington's disease (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); centrosome (ortholog) 2 120019396 120025013 + 22301074 116891928 MODEL JAAIVD010000001;XM_032893364;XM_032893365 XP_032749255;XP_032749256 calcium and integrin-binding protein 1 protein-coding 625979915 Ccl24 C-C motif chemokine ligand 24 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); chemotaxis (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); atopic dermatitis (ortholog) 16 18442125 18444347 + 22301074;30032202 116885820 MODEL JAAIVD010000004;XM_032887161 XP_032743052 C-C motif chemokine 24 protein-coding 625979921 LOC116914869 disintegrin and metalloproteinase domain-containing protein 26A-like 13 44070153 44074397 - 22301074;30032202 116914869 MODEL JAAIVD010000008;XM_032919315 XP_032775206 protein-coding 625979926 LOC116888815 EKC/KEOPS complex subunit LAGE3-like X 127939615 127941712 - 30032202 116888815 MODEL JAAIVD010000014;XM_032890094 XP_032745985 protein-coding 625979934 Ropn1l rhophilin associated tail protein 1 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium movement (ortholog); flagellated sperm motility (ortholog); sperm capacitation (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); motile cilium (ortholog) 3 149358469 149369562 + 116895593 MODEL JAAIVD010000012;XM_032896818 XP_032752709 ropporin-1-like protein protein-coding 625979943 LOC116883476 dynactin subunit 4-like 14 42948608 42950564 + 116883476 MODEL JAAIVD010000009 pseudo 625979944 Pank2 pantothenate kinase 2 ENCODES a protein that exhibits pantothenate kinase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); angiogenesis (ortholog); coenzyme A biosynthetic process (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); dystonia (ortholog); fundus dystrophy (ortholog); FOUND IN cytosol (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 5 110990477 111024489 + 22301074;30032202 116901990 MODEL JAAIVD010000023;XM_032904241;XM_032904242;XM_032904243;XM_032904244;XM_032904245;XM_032904246 XP_032760132;XP_032760133;XP_032760134;XP_032760135;XP_032760136;XP_032760137 pantothenate kinase 2, mitochondrial protein-coding 625979970 LOC116900416 olfactory receptor 4C46-like 5 70379680 70380594 + 22301074 116900416 MODEL JAAIVD010000023;XM_032902160 XP_032758051 protein-coding 625979973 Papola poly(A) polymerase alpha ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); cytosolic mRNA polyadenylation (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; FOUND IN nucleoplasm (ortholog) 7 123435771 123488303 + 22301074;30032202 116905441 MODEL JAAIVD010000026;XM_032908382;XM_032908383;XM_032908384;XM_032908385 XP_032764273;XP_032764274;XP_032764275;XP_032764276 protein-coding 625980005 LOC116894396 keratin-associated protein 20-2-like 2 157166723 157166893 + 116894396 MODEL JAAIVD010000001;XM_032896104 XP_032751995 protein-coding 625980008 LOC116900772 protein WFDC11-like 5 153293486 153296227 + 116900772 MODEL JAAIVD010000023;XM_032902484;XR_004387952 XP_032758375 protein-coding 625980017 Kcnh3 potassium voltage-gated channel subfamily H member 3 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); FOUND IN plasma membrane (ortholog) 1 272030143 272048899 + 22301074;30032202 116884988 MODEL JAAIVD010000025;XM_032886212;XM_032886221 XP_032742103;XP_032742112 protein-coding 625980039 Tmem89 transmembrane protein 89 8 100197231 100198279 + 116907624 MODEL JAAIVD010000027;XM_032910681 XP_032766572 protein-coding 625980045 Lnp1 leukemia NUP98 fusion partner 1 ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog) 4 41018928 41036834 - 116897919 MODEL JAAIVD010000003;XM_032899318;XM_032899319 XP_032755209;XP_032755210 protein-coding 625980056 Mchr1 melanin concentrating hormone receptor 1 ENCODES a protein that exhibits hormone binding (ortholog); melanin-concentrating hormone receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); positive regulation of calcium ion transport (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH morbid obesity (ortholog); obesity (ortholog); FOUND IN ciliary membrane (ortholog); cilium (ortholog); neuron projection (ortholog) 1 250985623 250989198 + 22301074;30032202 116913936 MODEL JAAIVD010000025;XM_032918202 XP_032774093 melanin-concentrating hormone receptor 1 protein-coding 625980062 LOC116904090 non-histone chromosomal protein HMG-17-like 1 150696242 150696514 + 22301074;30032202 116904090 MODEL JAAIVD010000025;XM_032906961 XP_032762852 protein-coding 625980065 LOC116893679 olfactory receptor 5A2-like 2 12362394 12363353 - 22301074;30032202 116893679 MODEL JAAIVD010000001;XM_032895396 XP_032751287 protein-coding 625980068 LOC116885467 U6 snRNA-associated Sm-like protein LSm6 1 89849341 89849559 + 116885467 MODEL JAAIVD010000025 pseudo 625980069 LOC116898593 40S ribosomal protein S26-like 4 177733626 177733975 - 116898593 MODEL JAAIVD010000003 pseudo 625980070 LOC116908443 U2 spliceosomal RNA 8 88146198 88146294 - 116908443 MODEL JAAIVD010000027 pseudo 625980071 LOC116884500 nucleotide exchange factor SIL1 15 8866747 9034797 + 116884500 MODEL JAAIVD010000010;XM_032885630 XP_032741521 protein-coding 625980082 Tlcd1 TLC domain containing 1 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); FOUND IN plasma membrane (ortholog) 9 92258287 92260352 - 30032202 116909413 MODEL JAAIVD010000002;XM_032912978;XM_032912979 XP_032768869;XP_032768870 TLC domain-containing protein 1 protein-coding 625980093 LOC116895562 uncharacterized LOC116895562 3 132723999 132725045 - 116895562 MODEL JAAIVD010000012;XR_004387289 ncrna 625980097 Hephl1 hephaestin like 1 ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Lichen Planus Follicularis (ortholog); Pili Torti, Developmental Delay, Neurological Abnormalities (ortholog) 8 10850010 10915066 - 22301074;30032202 116906990 MODEL JAAIVD010000027;XM_032909916 XP_032765807 hephaestin-like protein 1 protein-coding 625980119 Arpc4 actin related protein 2/3 complex subunit 4 ENCODES a protein that exhibits actin filament binding (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); Developmental Delay, Language Impairment, and Ocular Abnormalities (ortholog); Down syndrome (ortholog); FOUND IN Arp2/3 protein complex (ortholog) 6 33151530 33162178 - 22301074;30032202 116903417 MODEL JAAIVD010000024;XM_032905940 XP_032761831 actin-related protein 2/3 complex subunit 4 protein-coding 625980129 Otud5 OTU deubiquitinase 5 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH endocrine-cerebro-osteodysplasia syndrome (ortholog); Ependymomas (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) X 14258600 14292918 - 30032202 116888331 MODEL JAAIVD010000014;XM_032889603 XP_032745494 OTU domain-containing protein 5 protein-coding 625980143 LOC116889192 histone H3.3 type 1-like X 3261226 3261706 + 116889192 MODEL JAAIVD010000014 pseudo 625980144 Gpa33 glycoprotein A33 ASSOCIATED WITH Latent Tuberculosis (ortholog); FOUND IN plasma membrane (ortholog) 10 45222444 45257722 + 30032202 116911194 MODEL JAAIVD010000005;XM_032915065 XP_032770956 cell surface A33 antigen protein-coding 625980155 Ptpn5 protein tyrosine phosphatase non-receptor type 5 ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN exploration behavior (ortholog); negative regulation of MAP kinase activity (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) 2 152239601 152296567 + 22301074;30032202 116892088 MODEL JAAIVD010000001;XM_032893563 XP_032749454 tyrosine-protein phosphatase non-receptor type 5 protein-coding 625980174 Nsrp1 nuclear speckle splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN developmental process (ortholog); in utero embryonic development (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH epilepsy (ortholog); NEURODEVELOPMENTAL DISORDER WITH SPASTICITY, SEIZURES, AND BRAIN ABNORMALITIES (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 95721757 95755075 - 22301074 116909400 MODEL JAAIVD010000002;XM_032912966 XP_032768857 protein-coding 625980185 LOC116885692 bcl-2-like protein 2 1 4598 5083 - 30032202 116885692 MODEL JAAIVD010000025;XM_032887000 XP_032742891 protein-coding 625980188 Ccdc93 CCC complex scaffolding subunit CCDC93 INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog) 10 14025488 14095153 + 30032202 116911053 MODEL JAAIVD010000005;XM_032914806 XP_032770697 coiled-coil domain containing 93;coiled-coil domain-containing protein 93 protein-coding 625980216 Tac3 tachykinin precursor 3 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); substance K receptor binding (ortholog); INVOLVED IN positive regulation of blood pressure (ortholog); positive regulation of flagellated sperm motility (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Delayed Puberty (ortholog); hypertension (ortholog); FOUND IN extracellular space (ortholog) 1 206172835 206179279 + 22301074;30032202 116890046 MODEL JAAIVD010000025;XM_032890817 XP_032746708 tachykinin-3 protein-coding 625980227 Tead3 TEA domain transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); hippo signaling (ortholog); positive regulation of stem cell population maintenance (ortholog); FOUND IN transcription regulator complex (ortholog) 18 5508992 5528877 + 22301074;30032202 116887580 MODEL JAAIVD010000013;XM_032889205 XP_032745096 transcriptional enhancer factor TEF-5 protein-coding 625980244 LOC116887649 histone deacetylase complex subunit SAP18-like 18 19031825 19032290 + 116887649 MODEL JAAIVD010000013 pseudo 625980245 Cpa3 carboxypeptidase A3 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN angiotensin maturation (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN extracellular region (ortholog) 3 133896600 133923010 + 22301074;30032202 116895567 MODEL JAAIVD010000012;XM_032896800;XM_032896801 XP_032752691;XP_032752692 mast cell carboxypeptidase A protein-coding 625980265 LOC116891873 olfactory receptor 14A2-like 2 114427660 114428667 + 22301074;30032202 116891873 MODEL JAAIVD010000001;XM_032893273 XP_032749164 protein-coding 625980268 LOC116900334 protein cornichon homolog 1-like 5 65001650 65002370 + 116900334 MODEL JAAIVD010000023 pseudo 625980269 Larp1 La ribonucleoprotein 1, translational regulator ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to rapamycin (ortholog); mRNA stabilization (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); TORC1 complex (ortholog) 9 40170459 40261310 - 22301074;30032202 116910044 MODEL JAAIVD010000002;XM_032913832;XM_032913833 XP_032769723;XP_032769724 la-related protein 1 protein-coding 625980295 Bet1 Bet1 golgi vesicular membrane trafficking protein ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); vesicle fusion with Golgi apparatus (ortholog); ASSOCIATED WITH Congenital Muscular Dystrophy with Rapid Progression (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog) 6 134439269 134449171 + 30032202 116904105 MODEL JAAIVD010000024;XM_032906977 XP_032762868 BET1 homolog protein-coding 625980303 Glrx2 glutaredoxin 2 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to superoxide (ortholog); FOUND IN dendrite (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 10 23657878 23666318 + 116911719 MODEL JAAIVD010000005;XM_032915691 XP_032771582 protein-coding 625980311 Gpr83 G protein-coupled receptor 83 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); non-motile cilium (ortholog); plasma membrane (ortholog) 8 10649658 10659928 + 22301074;30032202 116907842 MODEL JAAIVD010000027;XM_032911031 XP_032766922 probable G-protein coupled receptor 83 protein-coding 625980319 LOC116888687 uncharacterized LOC116888687 X 14704067 14705075 + 116888687 MODEL JAAIVD010000014;XR_004386336 ncrna 625980323 LOC116887095 keratin-associated protein 10-12-like 18 1031035 1031922 - 22301074;30032202 116887095 MODEL JAAIVD010000013;XM_032888605;XM_032888606 XP_032744496;XP_032744497 keratin-associated protein 10-7-like protein-coding 625980330 Lrrc14b leucine rich repeat containing 14B 2 203788277 203792236 - 30032202 116892923 MODEL JAAIVD010000001;XM_032894849 XP_032750740 leucine-rich repeat-containing protein 14B protein-coding 625980336 Crybg3 crystallin beta-gamma domain containing 3 ENCODES a protein that exhibits protein kinase A binding (ortholog); FOUND IN protein-containing complex (ortholog) 4 43324529 43427416 - 30032202 116898922 MODEL JAAIVD010000003;XM_032900330 XP_032756221 very large A-kinase anchor protein protein-coding 625980362 Pdrg1 p53 and DNA damage regulated 1 ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN RPAP3/R2TP/prefoldin-like complex (ortholog) 5 132328715 132334870 - 116902132 MODEL JAAIVD010000023;XM_032904459 XP_032760350 p53 and DNA damage-regulated protein 1 protein-coding 625980371 Alpl alkaline phosphatase, biomineralization associated ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); calcium ion binding (ortholog); phosphoamidase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); cellular homeostasis (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH adult hypophosphatasia (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Alveolar Bone Loss (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog); extracellular space (ortholog) 1 20427302 20481875 + 30032202 116894122 MODEL JAAIVD010000025;XM_032895843 XP_032751734 alkaline phosphatase, tissue-nonspecific isozyme protein-coding 625980387 Redic1 regulator of DNA class I crossover intermediates 1 ASSOCIATED WITH spermatogenic failure (ortholog) 1 264192223 264250501 + 116890288 MODEL JAAIVD010000025;XM_032891003 XP_032746894 C1H12orf40 chromosome 1 C12orf40 homolog;uncharacterized protein C12orf40 homolog protein-coding 625980399 LOC116914623 heterogeneous nuclear ribonucleoprotein A3-like 13 5483590 5484688 - 116914623 MODEL JAAIVD010000008 pseudo 625980400 LOC116888672 THO complex subunit 1-like X 39527398 39544671 - 22301074;30032202 116888672 MODEL JAAIVD010000014;XM_032889971 XP_032745862 protein-coding 625980406 Tyr tyrosinase ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); melanin biosynthetic process (ortholog); pigmentation (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Albinism (ortholog); basal cell carcinoma (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); melanosome (ortholog); perinuclear region of cytoplasm (ortholog) 2 113783844 113860781 + 30032202 116894238 MODEL JAAIVD010000001;XM_032895943 XP_032751834 protein-coding 625980414 LOC116899407 ral GTPase-activating protein subunit beta-like 4 132549181 132552990 - 22301074;30032202 116899407 MODEL JAAIVD010000003;XM_032901144 XP_032757035 protein-coding 625980419 LOC116893063 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase epsilon-1-like 2 35260780 35295690 - 116893063 MODEL JAAIVD010000001;XM_032895023 XP_032750914 protein-coding 625980424 Timp2 TIMP metallopeptidase inhibitor 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); integrin binding (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of metallopeptidase activity (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular space (ortholog) 9 65703117 65752768 + 22301074;30032202 116908737 MODEL JAAIVD010000002;XM_032912084 XP_032767975 metalloproteinase inhibitor 2 protein-coding 625980433 LOC116902571 small nucleolar RNA SNORA17 5 42861639 42861791 - 116902571 MODEL JAAIVD010000023 pseudo 625980434 LOC116890498 small nucleolar RNA SNORA48 1 239307802 239307945 - 116890498 MODEL JAAIVD010000025;XR_004386684 snorna 625980437 Myl7 myosin light chain 7 ASSOCIATED WITH Down syndrome (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN A band (ortholog); dendritic spine (ortholog) 11 74853315 74856103 - 22301074;30032202 116912295 MODEL JAAIVD010000006;XM_032916298 XP_032772189 myosin regulatory light chain 2, atrial isoform protein-coding 625980447 LOC116897847 high mobility group protein B1-like 4 15023046 15023908 - 116897847 MODEL JAAIVD010000003 pseudo 625980448 LOC116906360 small nucleolar RNA SNORD113/SNORD114 family 7 127258648 127258722 + 116906360 MODEL JAAIVD010000026;XR_004388631 snorna 625980451 Tfb2m transcription factor B2, mitochondrial ENCODES a protein that exhibits mitochondrial transcription factor activity (ortholog); INVOLVED IN mitochondrial transcription (ortholog); transcription initiation at mitochondrial promoter (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 10 57868297 57885903 - 22301074;30032202 116911794 MODEL JAAIVD010000005;XM_032915797 XP_032771688 dimethyladenosine transferase 2, mitochondrial protein-coding 625980463 LOC116893710 olfactory receptor 5B3-like 2 13388665 13389597 - 22301074;30032202 116893710 MODEL JAAIVD010000001;XM_032895427 XP_032751318 protein-coding 625980466 LOC116902187 60S ribosomal protein L17-like 5 135027735 135028212 + 116902187 MODEL JAAIVD010000023 pseudo 625980467 LOC116894598 vomeronasal type-1 receptor 4-like 2 181619465 181620394 - 116894598 MODEL JAAIVD010000001 pseudo 625980468 Tmem131l transmembrane 131 like INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of immature T cell proliferation in thymus (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 3 69540878 69675163 + 30032202 116896741 MODEL JAAIVD010000012;XM_032898174;XM_032898175;XM_032898177;XM_032898178;XM_032898179 XP_032754065;XP_032754066;XP_032754068;XP_032754069;XP_032754070 transmembrane protein 131-like protein-coding 625980516 LOC116906421 small nucleolar RNA SNORA42/SNORA80 family 7 37333558 37333691 + 116906421 MODEL JAAIVD010000026;XR_004388683 snorna 625980519 R3hdm2 R3H domain containing 2 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); juvenile rheumatoid arthritis (ortholog) 1 205820913 205948919 + 22301074 116910049 MODEL JAAIVD010000025;XM_032913844;XM_032913853;XM_032913862;XM_032913869;XM_032913876;XM_032913884;XM_032913892;XM_032913899;XM_032913907;XM_032913915;XM_032913922;XM_032913931;XM_032913938;XM_032913944;XM_032913953;XM_032913961;XM_032913968;XM_032913975 XP_032769735;XP_032769744;XP_032769753;XP_032769760;XP_032769767;XP_032769775;XP_032769783;XP_032769790;XP_032769798;XP_032769806;XP_032769813;XP_032769822;XP_032769829;XP_032769835;XP_032769844;XP_032769852;XP_032769859;XP_032769866 R3H domain-containing protein 2 protein-coding 625980576 Fancg FA complementation group G INVOLVED IN DNA damage response (ortholog); mitochondrion organization (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group A (ortholog); Fanconi anemia complementation group G (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); mitochondrion (ortholog) 1 3496036 3503825 + 22301074;30032202 116891201 MODEL JAAIVD010000025;XM_032892031;XM_032892038 XP_032747922;XP_032747929 Fanconi anemia group G protein protein-coding 625980598 Hrc histidine rich calcium binding protein ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); negative regulation of calcium ion import into sarcoplasmic reticulum (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Body Weight (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrion (ortholog) 2 154171191 154175316 - 30032202 116892156 MODEL JAAIVD010000001;XM_032893652 XP_032749543 sarcoplasmic reticulum histidine-rich calcium-binding protein protein-coding 625980606 Apmap adipocyte plasma membrane associated protein ENCODES a protein that exhibits arylesterase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) 5 130292430 130316315 - 22301074 116902095 MODEL JAAIVD010000023;XM_032904392;XM_032904393;XM_032904394;XM_032904395 XP_032760283;XP_032760284;XP_032760285;XP_032760286 adipocyte plasma membrane-associated protein protein-coding 625980631 LOC116907952 UHRF1-binding protein 1-like 1 168884499 168890089 + 116907952 MODEL JAAIVD010000025;XM_032911178 XP_032767069 protein-coding 625980637 Dctn6 dynactin subunit 6 ENCODES a protein that exhibits dynein complex binding (ortholog); INVOLVED IN mitotic spindle organization (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); dynactin complex (ortholog) 13 52925676 52937235 + 30032202 116914676 MODEL JAAIVD010000008;XM_032919082 XP_032774973 protein-coding 625980648 LOC116906752 POU domain, class 5, transcription factor 1-like 8 40675003 40676561 + 116906752 MODEL JAAIVD010000027 pseudo 625980649 Cdk5rap2 CDK5 regulatory subunit associated protein 2 ENCODES a protein that exhibits calmodulin binding (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN brain development (ortholog); centriole replication (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH coloboma (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cell junction (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 82883603 83055450 + 22301074;30032202 116901176 MODEL JAAIVD010000025;XM_032902842 XP_032758733 CDK5 regulatory subunit-associated protein 2 protein-coding 625980690 Zpbp zona pellucida binding protein INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH spermatogenic failure 66 (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); zona pellucida receptor complex (ortholog) 11 80234968 80397656 - 30032202 116912646 MODEL JAAIVD010000006;XM_032916764 XP_032772655 zona pellucida-binding protein 1 protein-coding 625980701 Med17 mediator complex subunit 17 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH endometriosis (ortholog); genetic disease (ortholog); infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 8 11059446 11076761 - 22301074;30032202 116906682 MODEL JAAIVD010000027;XM_032909474 XP_032765365 mediator of RNA polymerase II transcription subunit 17 protein-coding 625980717 Coil coilin ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Cajal body (ortholog); female germ cell nucleus (ortholog); fibrillar center (ortholog) 9 81802502 81822717 - 30032202 116910193 MODEL JAAIVD010000002;XM_032914055 XP_032769946 protein-coding 625980729 LOC116891797 hemoglobin subunit beta-2 2 101816815 101818101 + 22301074;30032202 116891797 MODEL JAAIVD010000001;XM_032893151 XP_032749042 protein-coding 625980736 LOC116889502 U1 spliceosomal RNA X 110176301 110176490 - 116889502 MODEL JAAIVD010000014 pseudo 625980737 LOC116884085 small nucleolar RNA SNORA17 14 26768382 26768516 + 116884085 MODEL JAAIVD010000009;XR_004385828 snorna 625980740 LOC116884102 U2 spliceosomal RNA 14 75223282 75223352 - 116884102 MODEL JAAIVD010000009 pseudo 625980741 Slit3 slit guidance ligand 3 ENCODES a protein that exhibits Roundabout binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Brain Injuries (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN extracellular space (ortholog) 9 18295966 18884171 + 22301074;30032202 116909579 MODEL JAAIVD010000002;XM_032913200 XP_032769091 slit homolog 3 protein protein-coding 625980781 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12103263 12103335 - 116895138 MODEL JAAIVD010000001 trna 625980782 Tas1r1 taste 1 receptor member 1 ENCODES a protein that exhibits taste receptor activity (ortholog); INVOLVED IN sensory perception of umami taste (ortholog) 1 8701445 8712898 + 22301074;30032202 116892371 MODEL JAAIVD010000025;XM_032894036 XP_032749927 taste receptor type 1 member 1 protein-coding 625980791 Mterf2 mitochondrial transcription termination factor 2 ENCODES a protein that exhibits DNA binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 1 163313933 163323780 + 22301074;30032202 116907369 MODEL JAAIVD010000025;XM_032910325;XM_032910332;XR_004388823 XP_032766216;XP_032766223 transcription termination factor 2, mitochondrial protein-coding 625980804 LOC116884938 histone-lysine N-methyltransferase EZH2-like 15 22212526 22215285 + 116884938 MODEL JAAIVD010000010 pseudo 625980805 LOC116898227 peptidyl-prolyl cis-trans isomerase A-like 4 148176452 148176948 - 116898227 MODEL JAAIVD010000003 pseudo 625980806 LOC116895665 AKT-interacting protein-like 3 193414936 193416051 + 116895665 MODEL JAAIVD010000012 pseudo 625980807 LOC116900351 olfactory receptor 5W2-like 5 69068017 69068955 - 22301074;30032202 116900351 MODEL JAAIVD010000023;XM_032902104 XP_032757995 protein-coding 625980810 Tfdp2 transcription factor Dp-2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN heart development (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); malignant mesothelioma (ortholog); FOUND IN mitotic spindle (ortholog); nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) 8 87629477 87763412 + 22301074;30032202 116907040 MODEL JAAIVD010000027;XM_032909989;XM_032909990;XM_032909991;XM_032909992;XM_032909993;XM_032909994;XM_032909995 XP_032765880;XP_032765881;XP_032765882;XP_032765883;XP_032765884;XP_032765885;XP_032765886 protein-coding 625980848 Prr7 proline rich 7, synaptic ENCODES a protein that exhibits long-chain fatty acid binding (ortholog); protein tyrosine kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); positive regulation of apoptotic process (ortholog); postsynapse to nucleus signaling pathway (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) 14 73780510 73789129 + 116883306 MODEL JAAIVD010000009;XM_032884354 XP_032740245 proline-rich protein 7 protein-coding 625980855 Mbd6 methyl-CpG binding domain protein 6 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromocenter (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 1 205716734 205725350 - 22301074;30032202 116909914 MODEL JAAIVD010000025;XM_032913679;XM_032913687;XM_032913696;XM_032913703;XM_032913711;XM_032913719;XM_032913729;XM_032913735;XR_004389115 XP_032769570;XP_032769578;XP_032769587;XP_032769594;XP_032769602;XP_032769610;XP_032769620;XP_032769626 methyl-CpG-binding domain protein 6 protein-coding 625980899 LOC116901073 igE-binding protein-like 5 142847054 142848847 - 22301074 116901073 MODEL JAAIVD010000023;XM_032902639 XP_032758530 protein-coding 625980903 Syap1 synapse associated protein 1 INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to insulin stimulus (ortholog); cellular response to insulin-like growth factor stimulus (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) X 23475294 23509347 + 30032202 116888535 MODEL JAAIVD010000014;XM_032889830 XP_032745721 synapse-associated protein 1 protein-coding 625980916 Cep126 centrosomal protein 126 INVOLVED IN cilium assembly (ortholog); cytoplasmic microtubule organization (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN centrosome (ortholog); ciliary base (ortholog); midbody (ortholog) 8 4239602 4299741 - 22301074;30032202 116906758 MODEL JAAIVD010000027;XM_032909586;XM_032909587;XM_032909589;XM_032909590;XM_032909591;XM_032909592 XP_032765477;XP_032765478;XP_032765480;XP_032765481;XP_032765482;XP_032765483 centrosomal protein of 126 kDa protein-coding 625980945 LOC116883993 uncharacterized LOC116883993 14 814648 821422 - 116883993 MODEL JAAIVD010000009;XR_004385807 ncrna 625980950 Hjv hemojuvelin BMP co-receptor ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); hemochromatosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); BMP receptor complex (ortholog); cell surface (ortholog) 3 60779233 60783026 - 30032202 116895404 MODEL JAAIVD010000012;XM_032896691 XP_032752582 hemojuvelin protein-coding 625980958 LOC116907949 olfactory receptor 7G1-like 8 14290013 14290960 + 22301074;30032202 116907949 MODEL JAAIVD010000027;XM_032911170 XP_032767061 protein-coding 625980961 Serpina7 serpin family A member 7 ENCODES a protein that exhibits hormone binding (ortholog); INVOLVED IN post-embryonic development (ortholog); response to corticosterone (ortholog); response to nutrient levels (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); diabetic ketoacidosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog) X 75278143 75283787 + 30032202 116889367 MODEL JAAIVD010000014;XM_032890473 XP_032746364 thyroxine-binding globulin protein-coding 625980970 LOC116889326 small nuclear ribonucleoprotein G-like X 66564970 66567169 + 116889326 MODEL JAAIVD010000014 pseudo 625980971 Defb110 defensin beta 110 4 95999999 96003640 - 22301074;30032202 116898100 MODEL JAAIVD010000003;XM_032899484 XP_032755375 beta-defensin 110 protein-coding 625980975 Thbs4 thrombospondin 4 ENCODES a protein that exhibits calcium ion binding (ortholog); collagen binding (ortholog); fibronectin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); endothelial cell-cell adhesion (ortholog); myoblast migration (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 3 203494269 203540821 + 22301074 116895688 MODEL JAAIVD010000012;XM_032896889 XP_032752780 thrombospondin-4 protein-coding 625981001 LOC116911396 actin, cytoplasmic 2-like 10 53078530 53080074 + 116911396 MODEL JAAIVD010000005 pseudo 625981002 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60898969 60899042 - 116897690 MODEL JAAIVD010000012 trna 625981003 LOC116908364 small nucleolar RNA SNORA25 8 11111086 11111214 + 116908364 MODEL JAAIVD010000027;XR_004388914 snorna 625981006 Srp14 signal recognition particle 14 INVOLVED IN protein targeting to ER (ortholog); FOUND IN nucleus (ortholog); signal recognition particle, endoplasmic reticulum targeting (ortholog) 5 96628369 96632055 - 22301074;30032202 116901778 MODEL JAAIVD010000023;XM_032903919 XP_032759810 signal recognition particle 14 kDa protein protein-coding 625981015 LOC116885537 zinc finger protein 124-like 1 157331759 157341443 + 116885537 MODEL JAAIVD010000025 pseudo 625981016 Sh3bgrl SH3 domain binding glutamate rich protein like ENCODES a protein that exhibits protein-RNA adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of cytoplasmic translational initiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog) X 63284665 63377654 + 30032202 116887948 MODEL JAAIVD010000014;XM_032889400 XP_032745291 SH3 domain-binding glutamic acid-rich-like protein protein-coding 625981022 LOC116893061 cytochrome P450 2C11 2 34779291 34792930 - 22301074;30032202 116893061 MODEL JAAIVD010000001;XM_032895022 XP_032750913 protein-coding 625981030 Map3k15 mitogen-activated protein kinase kinase kinase 15 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) X 32699041 32866593 - 22301074;30032202 116887820 MODEL JAAIVD010000014;XM_032889339 XP_032745230 protein-coding 625981054 LOC116893891 uncharacterized LOC116893891 2 73863440 73876214 + 116893891 MODEL JAAIVD010000001;XR_004387009 ncrna 625981059 Psenen presenilin enhancer, gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Familial Acne Inversa 2 (ortholog); Familial Hidradenitis Suppurativa (ortholog); FOUND IN endoplasmic reticulum (ortholog); gamma-secretase complex (ortholog); Golgi apparatus (ortholog) 2 165447260 165448552 + 30032202 116892311 MODEL JAAIVD010000001;XM_032893932 XP_032749823 gamma-secretase subunit PEN-2 protein-coding 625981067 Brd3 bromodomain containing 3 ENCODES a protein that exhibits histone H3K18cr reader activity (ortholog); histone H3K27cr reader activity (ortholog); histone H3K9cr reader activity (ortholog); INVOLVED IN endodermal cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH medulloblastoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 5 9184319 9214220 + 30032202 116901238 MODEL JAAIVD010000023;XM_032902983;XM_032902985;XM_032902986;XM_032902987 XP_032758874;XP_032758876;XP_032758877;XP_032758878 bromodomain-containing protein 3 protein-coding 625981093 Ufc1 ubiquitin-fold modifier conjugating enzyme 1 ENCODES a protein that exhibits UFM1 conjugating enzyme activity (ortholog); INVOLVED IN brain development (ortholog); protein K69-linked ufmylation (ortholog); protein ufmylation (ortholog); ASSOCIATED WITH neurodevelopmental disorder with spasticity and poor growth (ortholog) 10 50453397 50460037 - 22301074;30032202 116911149 MODEL JAAIVD010000005;XM_032915004 XP_032770895 ubiquitin-fold modifier-conjugating enzyme 1 protein-coding 625981103 LOC116909227 olfactory receptor 10-like 9 32078043 32078972 + 22301074 116909227 MODEL JAAIVD010000002;XM_032912730 XP_032768621 protein-coding 625981106 Mmp7 matrix metallopeptidase 7 ENCODES a protein that exhibits endopeptidase activity (ortholog); heparin binding (ortholog); metallopeptidase activity (ortholog); INVOLVED IN antibacterial peptide biosynthetic process (ortholog); antibacterial peptide secretion (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); bladder neck obstruction (ortholog); Burns (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 8 3903994 3910000 + 22301074;30032202 116907196 MODEL JAAIVD010000027;XM_032910158 XP_032766049 matrilysin protein-coding 625981114 LOC116889637 glutaredoxin-1-like 116889637 MODEL JAAIVD010000020 pseudo 625981115 Hsbp1 heat shock factor binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonal transport of mitochondrion (ortholog); endodermal cell differentiation (ortholog); muscle contraction (ortholog) 17 38993910 38998144 + 22301074;30032202 116886327 MODEL JAAIVD010000011;XM_032887776 XP_032743667 heat shock factor-binding protein 1 protein-coding 625981123 Tbx5 T-box transcription factor 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN atrial septum development (ortholog); atrial septum morphogenesis (ortholog); atrioventricular bundle cell differentiation (ortholog); ASSOCIATED WITH aortic valve disease 2 (ortholog); atrial fibrillation (ortholog); atrial heart septal defect 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 16 33942238 33989823 - 22301074;30032202 116885535 MODEL JAAIVD010000004;XM_032886833 XP_032742724 T-box transcription factor TBX5 protein-coding 625981135 LOC116902619 small nucleolar RNA SNORA26 5 4142591 4142711 + 116902619 MODEL JAAIVD010000023;XR_004388197 snorna 625981138 LOC116906559 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 8 99759288 99759496 + 116906559 MODEL JAAIVD010000027 pseudo 625981139 Cit citron rho-interacting serine/threonine kinase ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN dendrite development (ortholog); G2/M transition of mitotic cell cycle (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); ASSOCIATED WITH Ataxia (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN actin cytoskeleton (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) 16 37825537 37983944 - 22301074;30032202 116885335 MODEL JAAIVD010000004;XM_032886606;XM_032886607;XM_032886608 XP_032742497;XP_032742498;XP_032742499 citron Rho-interacting kinase protein-coding 625981195 C14H6orf201 chromosome 14 C6orf201 homolog 14 53440237 53485024 + 22301074 116883433 MODEL JAAIVD010000009;XM_032884572 XP_032740463 uncharacterized protein C6orf201 homolog protein-coding 625981204 LOC116908840 neuferricin ENCODES a protein that exhibits heme binding (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); FOUND IN extracellular region (ortholog) 9 42718908 42737140 + 30032202 116908840 MODEL JAAIVD010000002;XM_032912261;XM_032912262;XM_032912263 XP_032768152;XP_032768153;XP_032768154 protein-coding 625981217 LOC116887936 forkhead box protein N2-like X 61334563 61335564 + 116887936 MODEL JAAIVD010000014 pseudo 625981218 Trdmt1 tRNA aspartic acid methyltransferase 1 ENCODES a protein that exhibits tRNA (cytidine-5-)-methyltransferase activity (ortholog); tRNA methyltransferase activity (ortholog); INVOLVED IN response to amphetamine (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog) 14 29156614 29166382 + 22301074 116883783 MODEL JAAIVD010000009;XM_032885025 XP_032740916 tRNA (cytosine(38)-C(5))-methyltransferase protein-coding 625981230 Slc7a11 solute carrier family 7 member 11 ENCODES a protein that exhibits cystine:glutamate antiporter activity (ortholog); L-kynurenine transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); brain development (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); contact dermatitis (ortholog); FOUND IN apical part of cell (ortholog); astrocyte projection (ortholog); brush border membrane (ortholog) 3 103935497 104003516 + 22301074;30032202 116896895 MODEL JAAIVD010000012;XM_032898442 XP_032754333 cystine/glutamate transporter protein-coding 625981246 Myrip myosin VIIA and Rab interacting protein ENCODES a protein that exhibits actin binding (ortholog); myosin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN positive regulation of insulin secretion (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); dense core granule (ortholog) 8 111551199 111685183 + 22301074;30032202 116907943 MODEL JAAIVD010000027;XM_032911163 XP_032767054 rab effector MyRIP protein-coding 625981266 LOC116894925 small nucleolar RNA SNORD26 2 9216959 9217033 - 116894925 MODEL JAAIVD010000001;XR_004387124 snorna 625981269 LOC116913052 U6 spliceosomal RNA 11 97908961 97909054 - 116913052 MODEL JAAIVD010000006 pseudo 625981270 LOC116907216 olfactory receptor 7G2-like 8 14323175 14324143 + 22301074;30032202 116907216 MODEL JAAIVD010000027;XM_032910182 XP_032766073 protein-coding 625981274 LOC116902532 small nucleolar RNA SNORA64/SNORA10 family 5 68798948 68799084 - 116902532 MODEL JAAIVD010000023;XR_004388136 snorna 625981277 Fbrs fibrosin ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN positive regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN extracellular space (ortholog) 2 74409444 74421772 - 116891470 MODEL JAAIVD010000001;XM_032892567;XM_032892568 XP_032748458;XP_032748459 probable fibrosin-1 protein-coding 625981300 LOC116913169 uncharacterized LOC116913169 12 51245787 51269045 - 116913169 MODEL JAAIVD010000007;XM_032917371 XP_032773262 uncharacterized protein LOC116913169 protein-coding 625981308 Septin9 septin 9 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); positive regulation of non-motile cilium assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Adenomatous Polyps (ortholog); amyotrophic neuralgia (ortholog); FOUND IN actin cytoskeleton (ortholog); axoneme (ortholog); cilium (ortholog) 9 66705995 66809300 - 22301074;30032202 116910342 MODEL JAAIVD010000002;XM_032914198 XP_032770089 septin-9 protein-coding 625981323 Psmb6 proteasome 20S subunit beta 6 FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 50138415 50140856 + 22301074 116909621 MODEL JAAIVD010000002;XM_032913248;XM_032913249 XP_032769139;XP_032769140 proteasome subunit beta type-6 protein-coding 625981337 Mak male germ cell associated kinase ENCODES a protein that exhibits protein kinase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of non-motile cilium assembly (ortholog); photoreceptor cell maintenance (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinitis pigmentosa (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 14 60023548 60069773 - 22301074;30032202 116883491 MODEL JAAIVD010000009;XM_032884649 XP_032740540 serine/threonine-protein kinase MAK protein-coding 625981355 Il13 interleukin 13 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-13 receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); alcoholic hepatitis (ortholog); allergic conjunctivitis (ortholog); FOUND IN cytoplasm (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) 9 36117926 36120631 - 22301074 116908495 MODEL JAAIVD010000002;XM_032911652 XP_032767543 interleukin-13 protein-coding 625981363 Gp5 glycoprotein V platelet ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; FOUND IN cell surface (ortholog); glycoprotein Ib-IX-V complex (ortholog) 4 15219731 15221661 - 22301074 116898745 MODEL JAAIVD010000003;XM_032900060 XP_032755951 platelet glycoprotein V protein-coding 625981368 Vasn vasorin ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to redox state (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) 9 17241951 17252457 - 22301074;30032202 116908583 MODEL JAAIVD010000002;XM_032911799 XP_032767690 protein-coding 625981374 LOC116908138 developmentally-regulated GTP-binding protein 1-like 8 32038444 32039165 - 116908138 MODEL JAAIVD010000027 pseudo 625981375 LOC116906417 small nucleolar RNA SNORA15 7 32765984 32766111 - 116906417 MODEL JAAIVD010000026;XR_004388679 snorna 625981378 Mars1 methionyl-tRNA synthetase 1 ENCODES a protein that exhibits methionine-tRNA ligase activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); methionyl-tRNA aminoacylation (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2U (ortholog); hereditary spastic paraplegia 70 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 205730239 205747421 - 22301074;30032202 116910002 MODEL JAAIVD010000025;XM_032913791;XM_032913797 XP_032769682;XP_032769688 methionine--tRNA ligase, cytoplasmic protein-coding 625981405 Nfkbie NFKB inhibitor epsilon ENCODES a protein that exhibits protein sequestering activity (ortholog); INVOLVED IN D-serine transmembrane transport (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); melanoma (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 4 84332471 84340172 - 22301074;30032202 116899132 MODEL JAAIVD010000003;XM_032900665 XP_032756556 NF-kappa-B inhibitor epsilon protein-coding 625981415 LOC116887825 actin-1-like X 35763319 35764279 + 116887825 MODEL JAAIVD010000014 pseudo 625981416 Slc4a11 solute carrier family 4 member 11 ENCODES a protein that exhibits active borate transmembrane transporter activity (ortholog); bicarbonate transmembrane transporter activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); borate transport (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH congenital hereditary endothelial dystrophy of cornea (ortholog); corneal dystrophy (ortholog); Corneal Dystrophy, Fuchs Endothelial, 4 (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 5 110423982 110435821 - 22301074;30032202 116901976 MODEL JAAIVD010000023;XM_032904222 XP_032760113 sodium bicarbonate transporter-like protein 11 protein-coding 625981438 LOC116905599 olfactory receptor 10A2-like 7 10098844 10099475 + 116905599 MODEL JAAIVD010000026 pseudo 625981439 LOC116896041 40S ribosomal protein S29-like 3 192751663 192751833 + 116896041 MODEL JAAIVD010000012 pseudo 625981440 Npas2 neuronal PAS domain protein 2 ENCODES a protein that exhibits DNA binding (ortholog); Hsp90 protein binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); circadian sleep/wake cycle (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Chronobiology Disorders (ortholog); cocaine abuse (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 115418747 115604312 + 22301074;30032202 116899315 MODEL JAAIVD010000003;XM_032900982 XP_032756873 neuronal PAS domain-containing protein 2 protein-coding 625981465 Chrng cholinergic receptor nicotinic gamma subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); bone development disease (ortholog); congenital myasthenic syndrome (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); plasma membrane (ortholog); postsynaptic membrane (ortholog) 4 159333159 159339097 + 22301074;30032202 116898256 MODEL JAAIVD010000003;XM_032899609 XP_032755500 acetylcholine receptor subunit gamma protein-coding 625981481 LOC116888604 steryl-sulfatase-like X 36955841 36957779 - 30032202 116888604 MODEL JAAIVD010000014;XM_032889904 XP_032745795 protein-coding 625981487 Fam167b family with sequence similarity 167 member B ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 28570223 28571878 + 116886904 MODEL JAAIVD010000025;XM_032888373;XM_032888381 XP_032744264;XP_032744272 protein FAM167B protein-coding 625981496 Fau FAU ubiquitin like and ribosomal protein S30 fusion ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-positive bacterium (ortholog); innate immune response in mucosa (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); extracellular space (ortholog) 2 1632287 1633857 - 22301074;30032202;8394356 116890684 MODEL JAAIVD010000001;X62671;XM_032891093;XM_032891094;XM_032891095 CAA44545;XP_032746984;XP_032746985;XP_032746986 fusion protein;ubiquitin-like protein fubi and ribosomal protein S30 protein-coding 625981512 Itga1 integrin subunit alpha 1 ENCODES a protein that exhibits collagen binding (ortholog); collagen binding involved in cell-matrix adhesion (ortholog); phosphatase activator activity (ortholog); INVOLVED IN cell adhesion (ortholog); cell chemotaxis (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; myocardial infarction pathway; ASSOCIATED WITH arteriosclerosis (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN acrosomal vesicle (ortholog); basal part of cell (ortholog); cell surface (ortholog) 3 181620151 181764885 + 22301074;30032202 116897178 MODEL JAAIVD010000012;XM_032898864 XP_032754755 integrin alpha-1 protein-coding 625981545 Plscr4 phospholipid scramblase 4 ENCODES a protein that exhibits CD4 receptor binding (ortholog); enzyme binding (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); sensorineural hearing loss (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 8 84138442 84162235 + 22301074;30032202 116908236 MODEL JAAIVD010000027;XM_032911497 XP_032767388 protein-coding 625981556 LOC116887551 60S ribosomal protein L36a-like 18 20252918 20253283 - 116887551 MODEL JAAIVD010000013 pseudo 625981557 LOC116884672 mitochondrial import receptor subunit TOM5 homolog 15 35454970 35455298 - 30032202 116884672 MODEL JAAIVD010000010;XM_032885846 XP_032741737 protein-coding 625981562 LOC116913645 metalloproteinase inhibitor 1-like 12 67979643 67980220 - 22301074;30032202 116913645 MODEL JAAIVD010000007;XM_032917913 XP_032773804 protein-coding 625981567 Nufip1 nuclear FMR1 interacting protein 1 ENCODES a protein that exhibits ATPase binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN fibrillar center (ortholog); nuclear matrix (ortholog); nucleolus (ortholog) 12 48269581 48298809 - 30032202 116913453 MODEL JAAIVD010000007;XM_032917651 XP_032773542 nuclear fragile X mental retardation-interacting protein 1 protein-coding 625981581 LOC116905854 presenilins-associated rhomboid-like protein, mitochondrial 7 31070529 31071540 + 116905854 MODEL JAAIVD010000026 pseudo 625981582 LOC116895490 UPF0235 protein C15orf40 homolog 3 100721489 100721951 - 116895490 MODEL JAAIVD010000012 pseudo 625981583 Scgb3a1 secretoglobin family 3A member 1 INVOLVED IN positive regulation of myoblast fusion (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN extracellular space (ortholog) 9 32276754 32278091 + 22301074;30032202 116910432 MODEL JAAIVD010000002;XM_032914276 XP_032770167 protein-coding 625981589 LOC116888069 glutathione peroxidase 2-like X 88951170 88967470 - 22301074;30032202 116888069 MODEL JAAIVD010000014;XM_032889450 XP_032745341 protein-coding 625981593 Syn1 synapsin I ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN neuron development (ortholog); neurotransmitter secretion (ortholog); regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoskeleton (ortholog) X 2767903 2822748 - 22301074;30032202 116889395 MODEL JAAIVD010000014;XM_032890499 XP_032746390 synapsin-1 protein-coding 625981610 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41426054 41426125 - 116884154 MODEL JAAIVD010000009 trna 625981611 Rtl9 retrotransposon Gag like 9 ASSOCIATED WITH X-linked spinocerebellar ataxia 1 (ortholog) X 95179503 95192010 + 116889232 MODEL JAAIVD010000014;XM_032890383 XP_032746274 retrotransposon Gag-like protein 9 protein-coding 625981618 LOC116906971 uncharacterized LOC116906971 8 67085691 67093965 + 116906971 MODEL JAAIVD010000027;XR_004388791 ncrna 625981623 LOC116899929 U1 spliceosomal RNA 4 140388397 140388522 - 116899929 MODEL JAAIVD010000003 pseudo 625981624 LOC116905939 glyceraldehyde-3-phosphate dehydrogenase-like 7 34133245 34133854 + 116905939 MODEL JAAIVD010000026 pseudo 625981625 LOC116894168 olfactory receptor 6-like 2 105097330 105098274 - 22301074 116894168 MODEL JAAIVD010000001;XM_032895883 XP_032751774 protein-coding 625981628 Dcun1d5 defective in cullin neddylation 1 domain containing 5 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of protein neddylation (ortholog); regulation of cell growth (ortholog); FOUND IN nucleus (ortholog); spindle (ortholog) 8 4359349 4382300 - 30032202 116906611 MODEL JAAIVD010000027;XM_032909370 XP_032765261 DCN1-like protein 5 protein-coding 625981640 Wdr5b WD repeat domain 5B 4 20813527 20815450 + 22301074 116898816 MODEL JAAIVD010000003;XM_032900170 XP_032756061 WD repeat-containing protein 5B protein-coding 625981645 LOC116894758 small nuclear ribonucleoprotein E-like 2 172867250 172868150 + 116894758 MODEL JAAIVD010000001 pseudo 625981646 LOC116909628 uncharacterized LOC116909628 9 51132898 51148757 - 116909628 MODEL JAAIVD010000002;XR_004389086 ncrna 625981651 Nicn1 nicolin 1, tubulin polyglutamylase complex subunit FOUND IN nucleoplasm (ortholog) 8 99618888 99624011 + 30032202 116907576 MODEL JAAIVD010000027;XM_032910611;XM_032910612 XP_032766502;XP_032766503 nicolin 1;nicolin-1 protein-coding 625981665 Arl6ip5 ARF like GTPase 6 interacting protein 5 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); glutathione metabolic process (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); ASSOCIATED WITH Experimental Neoplasms (ortholog); Neoplastic Cell Transformation (ortholog); Stomach Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); presynaptic cytosol (ortholog) 6 49805510 49827643 - 30032202 116903473 MODEL JAAIVD010000024;XM_032906037 XP_032761928 ADP ribosylation factor like GTPase 6 interacting protein 5;PRA1 family protein 3 protein-coding 625981672 LOC116900161 E3 ubiquitin-protein ligase TRAF7-like 5 24454433 24486861 + 116900161 MODEL JAAIVD010000023 pseudo 625981673 Ppp1r12b protein phosphatase 1 regulatory subunit 12B ASSOCIATED WITH breast lobular carcinoma (ortholog); Breast Neoplasms (ortholog); Congenital Infantile Lactic Acidosis (ortholog); FOUND IN A band (ortholog); Z disc (ortholog) 10 751603 943297 + 22301074;30032202 116911327 MODEL JAAIVD010000005;XM_032915242;XM_032915243;XM_032915244 XP_032771133;XP_032771134;XP_032771135 protein-coding 625981706 Nemf nuclear export mediator factor ENCODES a protein that exhibits alpha-aminoacyl-tRNA binding (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN CAT tailing (ortholog); nuclear export (ortholog); protein-containing complex assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); RQC complex (ortholog) 7 82974275 83021959 - 30032202 116905117 MODEL JAAIVD010000026;XM_032907856;XM_032907857 XP_032763747;XP_032763748 nuclear export mediator factor NEMF protein-coding 625981747 LOC116902525 small nucleolar RNA SNORD62 5 3412141 3412225 - 116902525 MODEL JAAIVD010000023;XR_004388134 snorna 625981750 Iftap intraflagellar transport associated protein ENCODES a protein that exhibits intraciliary transport particle A binding (ortholog); INVOLVED IN acrosome reaction (ortholog); fertilization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); cytosol (ortholog) 5 79374345 79447633 - 30032202 116901671 MODEL JAAIVD010000023;XM_032903783 XP_032759674 protein C11orf74 homolog protein-coding 625981761 Mknk1 MAPK interacting serine/threonine kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); intracellular signal transduction (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; p38 MAPK signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN nucleoplasm (ortholog) 1 39521584 39559632 + 22301074;30032202 116898150 MODEL JAAIVD010000025;XM_032899533;XM_032899535;XM_032899540;XM_032899542 XP_032755424;XP_032755426;XP_032755431;XP_032755433 MAP kinase-interacting serine/threonine-protein kinase 1 protein-coding 625981789 LOC116897946 olfactory receptor 5AC1-like 4 43067836 43068756 - 22301074;30032202 116897946 MODEL JAAIVD010000003;XM_032899345 XP_032755236 protein-coding 625981792 Tlx1 T cell leukemia homeobox 1 INVOLVED IN animal organ formation (ortholog); cell fate commitment (ortholog); central nervous system development (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Aneuploidy (ortholog); Neoplastic Cell Transformation (ortholog) 2 44648981 44655253 + 22301074;30032202 116893808 MODEL JAAIVD010000001;XM_032895518 XP_032751409 T-cell leukemia homeobox protein 1 protein-coding 625981799 LOC116904703 small nucleolar RNA SNORA17 6 1238132 1238262 - 116904703 MODEL JAAIVD010000024;XR_004388398 snorna 625981802 Dennd5b DENN domain containing 5B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of triglyceride transport (ortholog) 6 6639238 6763297 - 30032202 116903115 MODEL JAAIVD010000024;XM_032905449;XM_032905450;XM_032905451 XP_032761340;XP_032761341;XP_032761342 DENN domain-containing protein 5B protein-coding 625981832 Tnfsf9 TNF superfamily member 9 ENCODES a protein that exhibits signaling receptor binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN myeloid dendritic cell differentiation (ortholog); positive regulation of activated T cell proliferation (ortholog); positive regulation of cytotoxic T cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); B-cell lymphoma (ortholog); colorectal cancer (ortholog); FOUND IN plasma membrane (ortholog) 4 88483080 88485408 + 22301074;30032202 116898070 MODEL JAAIVD010000003;XM_032899465 XP_032755356 tumor necrosis factor ligand superfamily member 9 protein-coding 625981839 Dusp5 dual specificity phosphatase 5 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of vasoconstriction (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Brain Injuries (ortholog); Cardiac Fibrosis (ortholog) 2 52963751 52976753 + 22301074;30032202 116891286 MODEL JAAIVD010000001;XM_032892190 XP_032748081 dual specificity protein phosphatase 5 protein-coding 625981847 LOC116892770 vomeronasal type-2 receptor 116-like 2 182972235 182992972 - 116892770 MODEL JAAIVD010000001 pseudo 625981848 LOC116903067 interferon alpha-5-like 1 123640051 123640620 + 22301074;30032202 116903067 MODEL JAAIVD010000025;XM_032905370 XP_032761261 protein-coding 625981851 Smad7 SMAD family member 7 ENCODES a protein that exhibits activin receptor binding (ortholog); beta-catenin binding (ortholog); collagen binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); artery morphogenesis (ortholog); beta-catenin destruction complex disassembly (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; Bone morphogenetic proteins signaling pathway; colorectal cancer pathway; ASSOCIATED WITH atrial fibrillation (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 56573169 56601229 - 22301074;30032202 116884509 MODEL JAAIVD010000010;XM_032885637;XM_032885638 XP_032741528;XP_032741529 mothers against decapentaplegic homolog 7 protein-coding 625981863 Cited1 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); LBD domain binding (ortholog); INVOLVED IN brain development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); embryonic axis specification (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) X 60034985 60038206 - 22301074;30032202 116888507 MODEL JAAIVD010000014;XM_032889800 XP_032745691 cbp/p300-interacting transactivator 1 protein-coding 625981870 Ackr4 atypical chemokine receptor 4 ENCODES a protein that exhibits chemokine receptor activity (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog) 8 95413238 95414785 - 22301074;30032202 116907423 MODEL JAAIVD010000027;XM_032910390 XP_032766281 protein-coding 625981875 LOC116910630 U6 spliceosomal RNA 9 50318300 50318403 + 116910630 MODEL JAAIVD010000002;XR_004389169 snrna 625981878 LOC116888266 uncharacterized LOC116888266 X 66021684 66036317 - 116888266 MODEL JAAIVD010000014;XR_004386294 ncrna 625981883 Fpr2 formyl peptide receptor 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); N-formyl peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); astrocyte activation (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); dentin caries (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 2 100697254 100705610 - 30032202 116893978 A0A220QSC7 MODEL JAAIVD010000001;XM_032895696 XP_032751587 N-formyl peptide receptor 2 protein-coding 625981888 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 214957716 214957788 + 116895132 MODEL JAAIVD010000001 trna 625981889 LOC116907131 60S ribosomal protein L11-like 8 20256022 20260950 + 116907131 MODEL JAAIVD010000027 pseudo 625981890 LOC116890551 small nucleolar RNA SNORA17 1 101002535 101002666 + 116890551 MODEL JAAIVD010000025;XR_004386726 snorna 625981893 LOC116889690 fructose-bisphosphate aldolase-like 22301074 116889690 MODEL JAAIVD010000052;XM_032890577 XP_032746468 protein-coding 625981894 LOC116911480 left-right determination factor 1 10 59252461 59255735 + 22301074;30032202 116911480 MODEL JAAIVD010000005;XM_032915461;XM_032915463 XP_032771352;XP_032771354 protein-coding 625981908 Hrk harakiri, BCL2 interacting protein INVOLVED IN cellular response to potassium ion starvation (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of neuron apoptotic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN mitochondrion (ortholog) 16 35658305 35658581 - 30032202 116885268 MODEL JAAIVD010000004;XM_032886502 XP_032742393 activator of apoptosis harakiri protein-coding 625981911 LOC116893319 ubiquitin-40S ribosomal protein S27a-like 2 152539982 152541034 - 116893319 MODEL JAAIVD010000001 pseudo 625981912 LOC116886241 arylacetamide deacetylase-like 4 1 14266285 14275748 - 22301074;30032202 116886241 MODEL JAAIVD010000025;XM_032887655 XP_032743546 protein-coding 625981918 Phldb2 pleckstrin homology like domain family B member 2 INVOLVED IN basement membrane organization (ortholog); cell migration (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN basal cortex (ortholog); cell cortex (ortholog); cell leading edge (ortholog) 4 30469268 30566278 - 30032202 116898882 MODEL JAAIVD010000003;XM_032900256 XP_032756147 pleckstrin homology-like domain family B member 2 protein-coding 625981941 Slc30a5 solute carrier family 30 member 5 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cobalt ion transport (ortholog); GPI anchor biosynthetic process (ortholog); intracellular zinc ion homeostasis (ortholog); ASSOCIATED WITH Bradycardia (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog); ER to Golgi transport vesicle membrane (ortholog) 3 158187475 158217303 - 22301074;30032202 116897103 MODEL JAAIVD010000012;XM_032898745 XP_032754636 zinc transporter 5 protein-coding 625981961 Cimip6 ciliary microtubule inner protein 6 11 97961836 97977978 - 116912062 MODEL JAAIVD010000006;XM_032915925 XP_032771816 C11H2orf73 chromosome 11 C2orf73 homolog;uncharacterized protein C2orf73 homolog protein-coding 625981968 Sp8 Sp8 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN dorsal/ventral pattern formation (ortholog); embryonic limb morphogenesis (ortholog); proximal/distal pattern formation (ortholog) 7 117271926 117276213 - 30032202 116905393 MODEL JAAIVD010000026;XM_032908343;XM_032908344 XP_032764234;XP_032764235 transcription factor Sp8 protein-coding 625981977 LOC116888194 uncharacterized LOC116888194 X 123004804 123007304 - 116888194 MODEL JAAIVD010000014 pseudo 625981978 LOC116912360 heat shock protein HSP 90-alpha-like 11 30560 32753 - 116912360 MODEL JAAIVD010000006 pseudo 625981979 LOC116889436 U6 spliceosomal RNA X 15486938 15487042 + 116889436 MODEL JAAIVD010000014;XR_004386398 snrna 625981982 Grb7 growth factor receptor bound protein 7 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); positive regulation of cell migration (ortholog); stress granule assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Neoplasms (ortholog); esophageal carcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); focal adhesion (ortholog) 9 55940519 55949429 - 22301074 116908699 MODEL JAAIVD010000002;XM_032912023 XP_032767914 growth factor receptor-bound protein 7 protein-coding 625982001 LOC116911654 uncharacterized LOC116911654 1 232081910 232085860 - 116911654 MODEL JAAIVD010000025;XR_004389333 ncrna 625982005 LOC116910978 E3 ubiquitin-protein ligase ZNF598-like 10 91403826 91418041 - 116910978 MODEL JAAIVD010000005 pseudo 625982006 LOC116913627 ribonuclease pancreatic beta-type 12 72154664 72156807 - 22301074;30032202 116913627 MODEL JAAIVD010000007;XM_032917894 XP_032773785 protein-coding 625982012 LOC116907684 olfactory receptor 148-like 8 82488173 82489090 - 22301074 116907684 MODEL JAAIVD010000027;XM_032910790 XP_032766681 protein-coding 625982015 Ankrd34b ankyrin repeat domain 34B 3 203860619 203877510 - 22301074 116897300 MODEL JAAIVD010000012;XM_032899039;XM_032899040;XM_032899041 XP_032754930;XP_032754931;XP_032754932 ankyrin repeat domain-containing protein 34B protein-coding 625982031 LOC116895225 guanylate-binding protein 1-like 3 18111261 18121606 - 22301074;30032202 116895225 MODEL JAAIVD010000012;XM_032896553 XP_032752444 protein-coding 625982045 Ttll5 tubulin tyrosine ligase like 5 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); choroidal sclerosis (ortholog); cone-rod dystrophy (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 7 99929830 100149536 + 30032202 116905300 MODEL JAAIVD010000026;XM_032908169;XM_032908170;XM_032908171;XM_032908172;XM_032908173;XM_032908174;XM_032908175;XM_032908176;XM_032908177;XM_032908179;XM_032908180;XM_032908181;XM_032908182 XP_032764060;XP_032764061;XP_032764062;XP_032764063;XP_032764064;XP_032764065;XP_032764066;XP_032764067;XP_032764068;XP_032764070;XP_032764071;XP_032764072;XP_032764073 tubulin polyglutamylase TTLL5 protein-coding 625982124 Nans N-acetylneuraminate synthase ENCODES a protein that exhibits N-acylneuraminate-9-phosphate synthase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); glycosylation (ortholog); N-acetylneuraminate biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH bone development disease (ortholog); Developmental Disabilities (ortholog); spondyloepimetaphyseal dysplasia, Genevieve-type (ortholog); FOUND IN cytosol (ortholog) 1 99573735 99590404 + 22301074;30032202 116901901 MODEL JAAIVD010000025;XM_032904114 XP_032760005 sialic acid synthase protein-coding 625982134 LOC116913866 60S ribosomal protein L31-like 12 3431103 3431479 + 22301074;30032202 116913866 MODEL JAAIVD010000007;XM_032918162 XP_032774053 protein-coding 625982138 LOC116898330 ferritin heavy chain-like 4 42606488 42609583 - 22301074;30032202 116898330 MODEL JAAIVD010000003;XM_032899662 XP_032755553 protein-coding 625982145 Gigyf1 GRB10 interacting GYF protein 1 INVOLVED IN insulin-like growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Coffin-Siris syndrome 6 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN protein-containing complex (ortholog) 16 16492388 16507904 - 22301074;30032202 116885138 MODEL JAAIVD010000004;XM_032886321 XP_032742212 GRB10-interacting GYF protein 1 protein-coding 625982176 LOC116906034 ATP synthase subunit ATP5MPL, mitochondrial-like 7 37439915 37447450 - 22301074;30032202 116906034 MODEL JAAIVD010000026;XM_032909093 XP_032764984 protein-coding 625982182 Mettl16 methyltransferase 16, RNA N6-adenosine ENCODES a protein that exhibits mRNA m(6)A methyltransferase activity (ortholog); RNA binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA destabilization (ortholog); mRNA processing (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 93515565 93560236 + 30032202 116908871 MODEL JAAIVD010000002;XM_032912313;XM_032912314 XP_032768204;XP_032768205 RNA N6-adenosine-methyltransferase METTL16;methyltransferase 16, N6-methyladenosine;methyltransferase like 16 protein-coding 625982199 LOC116893712 olfactory receptor 5B3-like 2 13441448 13442370 + 116893712 MODEL JAAIVD010000001 pseudo 625982200 Rrp1 ribosomal RNA processing 1 ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 18 1690567 1701522 - 22301074;30032202 116887204 MODEL JAAIVD010000013;XM_032888761 XP_032744652 ribosomal RNA processing protein 1 homolog A protein-coding 625982217 LOC116904494 histone-lysine N-methyltransferase 2C 6 154470262 154632974 - 22301074;30032202 116904494 MODEL JAAIVD010000024;XM_032907291 XP_032763182 protein-coding 625982274 Ccdc66 coiled-coil domain containing 66 ENCODES a protein that exhibits microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH retinal degeneration (ortholog); retinitis pigmentosa (ortholog); FOUND IN axoneme (ortholog); cell junction (ortholog); centriolar satellite (ortholog) 13 3205117 3238485 - 30032202 116914486 MODEL JAAIVD010000008;XM_032918798 XP_032774689 coiled-coil domain-containing protein 66 protein-coding 625982297 LOC116912642 signal recognition particle 19 kDa protein-like 11 2786414 2786836 - 22301074;30032202 116912642 MODEL JAAIVD010000006;XM_032916761 XP_032772652 protein-coding 625982300 LOC116904487 DNA-(apurinic or apyrimidinic site) lyase-like 6 148078213 148089946 + 116904487 MODEL JAAIVD010000024 pseudo 625982301 LOC116906369 small nucleolar RNA SNORD113/SNORD114 family 7 127259357 127259431 + 116906369 MODEL JAAIVD010000026;XR_004388638 snorna 625982304 LOC116893572 histocompatibility antigen 60b-like 2 222087626 222102417 - 30032202 116893572 MODEL JAAIVD010000001;XM_032895279 XP_032751170 protein-coding 625982312 LOC116895683 dnaJ homolog subfamily B member 1-like 1 79593742 79594974 - 116895683 MODEL JAAIVD010000025 pseudo 625982313 Nampt nicotinamide phosphoribosyltransferase ENCODES a protein that exhibits cytokine activity (ortholog); heterocyclic compound binding (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cellular response to amyloid-beta (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); carotid artery disease (ortholog); colitis (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 46154666 46192794 + 22301074;30032202 116904963 MODEL JAAIVD010000026;XM_032907624 XP_032763515 protein-coding 625982328 LOC116894518 vomeronasal type-1 receptor 4-like 2 174921272 174922221 - 22301074;30032202 116894518 MODEL JAAIVD010000001;XM_032896220 XP_032752111 protein-coding 625982331 LOC116888853 germ cell-less protein-like 2 X 917726 919756 + 22301074;30032202 116888853 MODEL JAAIVD010000014;XM_032890122 XP_032746013 protein-coding 625982336 Agr2 anterior gradient 2, protein disulphide isomerase family member ENCODES a protein that exhibits dystroglycan binding (ortholog); epidermal growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN digestive tract morphogenesis (ortholog); inflammatory response (ortholog); lung goblet cell differentiation (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); pancreatic ductal adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); extracellular space (ortholog) 7 49253415 49263683 + 30032202 116904973 MODEL JAAIVD010000026;XM_032907654 XP_032763545 anterior gradient protein 2 homolog protein-coding 625982348 Nsmce2 NSE2 SUMO ligase component of SMC5/6 complex ENCODES a protein that exhibits SUMO transferase activity (ortholog); INVOLVED IN cellular senescence (ortholog); double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); Developmental Disabilities (ortholog); Seckel syndrome 10 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 233899762 234113323 + 22301074;30032202 116911967 MODEL JAAIVD010000025;XM_032915890;XM_032915892;XM_032915894;XM_032915900;XM_032915903;XR_004389413 XP_032771781;XP_032771783;XP_032771785;XP_032771791;XP_032771794 E3 SUMO-protein ligase NSE2;NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase protein-coding 625982369 Mta1 metastasis associated 1 ENCODES a protein that exhibits enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); double-strand break repair (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH endometriosis (ortholog); Lymphatic Metastasis (ortholog); Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 130701756 130740378 + 22301074;30032202 116905528 MODEL JAAIVD010000026;XM_032908557;XM_032908558;XM_032908559;XM_032908560;XM_032908561;XM_032908562;XM_032908563;XM_032908564 XP_032764448;XP_032764449;XP_032764450;XP_032764451;XP_032764452;XP_032764453;XP_032764454;XP_032764455 metastasis-associated protein MTA1 protein-coding 625982410 Tnfrsf9 TNF receptor superfamily member 9 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN regulation of immature T cell proliferation in thymus (ortholog); ASSOCIATED WITH celiac disease (ortholog); Colonic Neoplasms (ortholog); dilated cardiomyopathy (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 1 9815568 9831192 - 22301074;30032202 116886135 MODEL JAAIVD010000025;XM_032887485 XP_032743376 tumor necrosis factor receptor superfamily member 9 protein-coding 625982422 LOC116898185 vomeronasal type-2 receptor 116-like 4 132505912 132529590 - 22301074;30032202 116898185 MODEL JAAIVD010000003;XM_032899548 XP_032755439 protein-coding 625982430 LOC116913694 apolipoprotein L3-like 1 249748161 249754885 - 22301074;30032202 116913694 MODEL JAAIVD010000025;XM_032917990 XP_032773881 protein-coding 625982437 LOC116902580 small nucleolar RNA SNORA17 5 38931651 38931780 + 116902580 MODEL JAAIVD010000023;XR_004388173 snorna 625982440 Tmem100 transmembrane protein 100 INVOLVED IN angiogenesis (ortholog); arterial endothelial cell differentiation (ortholog); BMP signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); perikaryon (ortholog); perinuclear region of cytoplasm (ortholog) 9 80769050 80773312 - 30032202 116909781 MODEL JAAIVD010000002;XM_032913473 XP_032769364 protein-coding 625982446 Pde7a phosphodiesterase 7A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); cyclic-nucleotide phosphodiesterase activity (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway 3 134679159 134764650 + 30032202 116897006 MODEL JAAIVD010000012;XM_032898611;XM_032898612 XP_032754502;XP_032754503 high affinity cAMP-specific 3',5'-cyclic phosphodiesterase 7A protein-coding 625982466 LOC116912476 polyadenylate-binding protein-interacting protein 1-like 11 92006850 92007970 - 116912476 MODEL JAAIVD010000006 pseudo 625982467 LOC116897324 60S ribosomal protein L7a-like 3 211748009 211748811 - 116897324 MODEL JAAIVD010000012 pseudo 625982468 LOC116890016 ADP-ribosylation factor 1-like 1 192325487 192326017 - 116890016 MODEL JAAIVD010000025 pseudo 625982469 B2m beta-2-microglobulin ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); structural molecule activity (ortholog); INVOLVED IN amyloid fibril formation (ortholog); antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous protein antigen via MHC class Ib, TAP-dependent (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); arteriosclerosis (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 5 100253144 100259171 + 22301074;30032202 116901881 MODEL JAAIVD010000023;XM_032904088 XP_032759979 protein-coding 625982476 LOC116895238 myosin regulatory light chain RLC-A-like 3 23904080 23904610 - 116895238 MODEL JAAIVD010000012 pseudo 625982477 Pea15 proliferation and apoptosis adaptor protein 15 INVOLVED IN negative regulation of D-glucose import (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 10 51309384 51319236 - 22301074;30032202 116911522 MODEL JAAIVD010000005;XM_032915516 XP_032771407 astrocytic phosphoprotein PEA-15 protein-coding 625982485 Alox5ap arachidonate 5-lipoxygenase activating protein ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); arachidonate binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); leukotriene biosynthetic process (ortholog); leukotriene production involved in inflammatory response (ortholog); PARTICIPATES IN leukotriene metabolic pathway; lipoxygenase mediated pathway of arachidonic acid metabolism; ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); brain infarction (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 16 4574947 4597401 - 22301074;30032202 116885442 MODEL JAAIVD010000004;XM_032886725 XP_032742616 arachidonate 5-lipoxygenase-activating protein protein-coding 625982494 Pnma2 PNMA family member 2 12 57566536 57572748 - 116913410 MODEL JAAIVD010000007;XM_032917595;XM_032917596 XP_032773486;XP_032773487 paraneoplastic antigen Ma2 protein-coding 625982504 LOC116910661 small nucleolar RNA SNORD95 9 31403676 31403743 + 116910661 MODEL JAAIVD010000002;XR_004389193 snorna 625982507 Plppr4 phospholipid phosphatase related 4 ENCODES a protein that exhibits lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN axonogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); inner ear development (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 3 42373554 42412327 + 30032202 116896321 MODEL JAAIVD010000012;XM_032897416 XP_032753307 phospholipid phosphatase-related protein type 4 protein-coding 625982518 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42541597 42541668 + 116884241 MODEL JAAIVD010000009 trna 625982519 LOC116898242 glyceraldehyde-3-phosphate dehydrogenase-like 4 154624995 154626049 - 116898242 MODEL JAAIVD010000003 pseudo 625982520 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60857005 60857076 - 116897685 MODEL JAAIVD010000012 trna 625982521 Mapk11 mitogen-activated protein kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN bone development (ortholog); cellular response to interleukin-1 (ortholog); cellular response to UV-B (ortholog); PARTICIPATES IN adenosine signaling pathway; eicosanoid signaling pathway; FasL mediated signaling pathway; ASSOCIATED WITH cardiomyopathy (ortholog); FOUND IN cytosol (ortholog) 1 258445695 258452691 - 22301074;30032202 116915008 MODEL JAAIVD010000025;XM_032919409 XP_032775300 protein-coding 625982537 Ssr3 signal sequence receptor subunit 3 ASSOCIATED WITH basal cell carcinoma (ortholog); congenital disorder of glycosylation (ortholog) 3 90315581 90329156 + 22301074;30032202 116896814 MODEL JAAIVD010000012;XM_032898290 XP_032754181 translocon-associated protein subunit gamma protein-coding 625982546 Tcp11l1 t-complex 11 like 1 ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN microtubule (ortholog) 5 82589390 82619357 - 30032202 116901705 MODEL JAAIVD010000023;XM_032903834 XP_032759725 T-complex protein 11-like protein 1 protein-coding 625982560 LOC116914993 lysine--tRNA ligase-like 13 27207443 27216950 + 116914993 MODEL JAAIVD010000008 pseudo 625982561 LOC116893696 olfactory receptor 5B2-like 2 13012148 13013074 + 22301074;30032202 116893696 MODEL JAAIVD010000001;XM_032895413 XP_032751304 protein-coding 625982564 LOC116898410 CD99 antigen-like protein 2 4 87099927 87119600 + 116898410 MODEL JAAIVD010000003;XM_032899697 XP_032755588 protein-coding 625982577 LOC116898858 uncharacterized LOC116898858 1 41881250 41893486 - 116898858 MODEL JAAIVD010000025;XR_004387668;XR_004387669 ncrna 625982585 LOC116911560 40S ribosomal protein S2-like 10 8691987 8692562 + 116911560 MODEL JAAIVD010000005 pseudo 625982586 Mogs mannosyl-oligosaccharide glucosidase ASSOCIATED WITH congenital disorder of glycosylation type IIb (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 63106426 63109787 - 30032202 116903624 MODEL JAAIVD010000024;XM_032906281 XP_032762172 protein-coding 625982594 Adgrb1 adhesion G protein-coupled receptor B1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); lipopolysaccharide binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); defense response to Gram-negative bacterium (ortholog); engulfment of apoptotic cell (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); glioblastoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); extracellular space (ortholog); focal adhesion (ortholog) 1 247262594 247334161 + 22301074 116912496 MODEL JAAIVD010000025;XM_032916582 XP_032772473 protein-coding 625982629 Arfrp1 ADP ribosylation factor related protein 1 INVOLVED IN gastrulation (ortholog); Golgi to plasma membrane protein transport (ortholog); protein localization to Golgi apparatus (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); trans-Golgi network (ortholog) 5 158451728 158459244 - 22301074;30032202 116902439 MODEL JAAIVD010000023;XM_032904978;XM_032904979;XM_032904980;XM_032904981;XR_004388072 XP_032760869;XP_032760870;XP_032760871;XP_032760872 ADP-ribosylation factor-related protein 1 protein-coding 625982655 LOC116888585 importin subunit alpha-1-like X 15228223 15229940 - 116888585 MODEL JAAIVD010000014 pseudo 625982656 LOC116889458 U7 small nuclear RNA X 75513571 75513624 - 116889458 MODEL JAAIVD010000014 pseudo 625982657 Entpd6 ectonucleoside triphosphate diphosphohydrolase 6 ENCODES a protein that exhibits CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); guanosine-5'-triphosphate,3'-diphosphate diphosphatase activity (ortholog); INVOLVED IN response to calcium ion (ortholog); response to magnesium ion (ortholog); ASSOCIATED WITH obesity (ortholog); seminoma (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) 5 130457415 130480444 + 30032202 116902097 MODEL JAAIVD010000023;XM_032904398;XM_032904399;XR_004388043 XP_032760289;XP_032760290 protein-coding 625982681 LOC116907715 uncharacterized LOC116907715 8 28215509 28216667 - 116907715 MODEL JAAIVD010000027;XR_004388838 ncrna 625982685 LOC116909919 olfactory receptor 2V2 9 31764927 31765901 - 22301074 116909919 MODEL JAAIVD010000002;XM_032913682 XP_032769573 protein-coding 625982689 Enpp2 ectonucleotide pyrophosphatase/phosphodiesterase 2 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); calcium ion binding (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); cellular response to cadmium ion (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH Birth Weight (ortholog); Cadmium Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular space (ortholog) 1 229254302 229366809 - 22301074;30032202 116911477 MODEL JAAIVD010000025;XM_032915462;XM_032915468;XM_032915476;XM_032915484;XM_032915492;XM_032915499;XM_032915507;XM_032915514 XP_032771353;XP_032771359;XP_032771367;XP_032771375;XP_032771383;XP_032771390;XP_032771398;XP_032771405 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 protein-coding 625982730 LOC116909481 olfactory receptor 2T29-like 9 39582873 39583835 + 22301074 116909481 MODEL JAAIVD010000002;XM_032913077 XP_032768968 protein-coding 625982733 LOC116889574 U6 spliceosomal RNA X 36261979 36262085 + 116889574 MODEL JAAIVD010000014;XR_004386490 snrna 625982736 Esam endothelial cell adhesion molecule ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cell-cell adhesion (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH INTRACRANIAL HEMORRHAGE, SEIZURES, AND SPASTICITY (ortholog); schizophrenia (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 8 33693897 33704641 + 30032202 116907455 MODEL JAAIVD010000027;XM_032910438;XM_032910439 XP_032766329;XP_032766330 endothelial cell-selective adhesion molecule protein-coding 625982750 Zcchc24 zinc finger CCHC-type containing 24 13 1815932 1869185 - 22301074 116914599 MODEL JAAIVD010000008;XM_032918960 XP_032774851 zinc finger CCHC domain-containing protein 24 protein-coding 625982758 Nkain2 sodium/potassium transporting ATPase interacting 2 ASSOCIATED WITH alcohol dependence (ortholog); cognitive disorder (ortholog); neuroblastoma (ortholog); FOUND IN plasma membrane (ortholog) 2 205847118 207053325 - 30032202 116893547 MODEL JAAIVD010000001;XM_032895265 XP_032751156 sodium/potassium-transporting ATPase subunit beta-1-interacting protein 2 protein-coding 625982769 LOC116883353 histone H2A type 1-H-like 14 41650402 41651145 + 22301074;30032202 116883353 MODEL JAAIVD010000009;XM_032884431 XP_032740322 protein-coding 625982774 Sptb spectrin beta, erythrocytic ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN hemopoiesis (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH anemia (ortholog); Chudley-Mccullough syndrome (ortholog); congenital hemolytic anemia (ortholog); FOUND IN cell surface (ortholog); cortical cytoskeleton (ortholog); cytosol (ortholog) 7 90736079 90862738 - 22301074;30032202 116905185 MODEL JAAIVD010000026;XM_032907973 XP_032763864 spectrin beta chain, erythrocytic protein-coding 625982814 LOC116888245 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like X 24616342 24616713 + 116888245 MODEL JAAIVD010000014 pseudo 625982815 LOC116885797 zinc finger protein AEBP2-like 16 39050689 39051570 - 116885797 MODEL JAAIVD010000004 pseudo 625982816 LOC116908555 polypeptide N-acetylgalactosaminyltransferase 4-like 1 178227000 178230849 + 30032202 116908555 MODEL JAAIVD010000025;XM_032911761 XP_032767652 protein-coding 625982821 Eea1 early endosome antigen 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); GTP-dependent protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); endocytosis (ortholog); vesicle fusion (ortholog); FOUND IN axonal spine (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 1 175176540 175281404 + 22301074;30032202 116908514 MODEL JAAIVD010000025;XM_032911691 XP_032767582 protein-coding 625982854 LOC116898366 protein LLP homolog 4 60878423 60878761 + 30032202 116898366 MODEL JAAIVD010000003;XM_032899679 XP_032755570 protein-coding 625982857 Cenpf centromere protein F ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); dynein complex binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); kidney development (ortholog); metaphase chromosome alignment (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); cystinuria (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); chromosome, centromeric region (ortholog) 10 67710777 67756495 - 22301074;30032202 116911239 MODEL JAAIVD010000005;XM_032915140 XP_032771031 protein-coding 625982879 LOC116893070 serine/arginine repetitive matrix protein 1-like 2 40589699 40592070 - 116893070 MODEL JAAIVD010000001;XM_032895028 XP_032750919 protein-coding 625982885 LOC116889942 olfactory receptor 6C6-like 1 161289189 161290154 + 22301074;30032202 116889942 MODEL JAAIVD010000025;XM_032890749 XP_032746640 protein-coding 625982889 LOC116890633 U2 spliceosomal RNA 1 177052776 177052877 + 116890633 MODEL JAAIVD010000025 pseudo 625982890 Cic capicua transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brain development (ortholog); learning (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) 2 169420740 169447313 - 30032202 116892465 MODEL JAAIVD010000001;XM_032894181 XP_032750072 protein capicua homolog protein-coding 625982915 LOC116906846 prostaglandin reductase 1-like 8 95830681 95831834 + 22301074;30032202 116906846 MODEL JAAIVD010000027;XM_032909741 XP_032765632 protein-coding 625982920 Ttc39b tetratricopeptide repeat domain 39B INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of cholesterol storage (ortholog); regulation of cholesterol efflux (ortholog); ASSOCIATED WITH atherosclerosis (ortholog) 1 70447361 70540593 + 22301074;30032202 116900639 MODEL JAAIVD010000025;XM_032902353;XM_032902359 XP_032758244;XP_032758250 tetratricopeptide repeat protein 39B protein-coding 625982947 LOC116894059 olfactory receptor 51A7-like 2 102806354 102807292 + 22301074 116894059 MODEL JAAIVD010000001;XM_032895782 XP_032751673 protein-coding 625982950 LOC116893650 eukaryotic translation initiation factor 5-like 2 10941123 10942512 - 116893650 MODEL JAAIVD010000001 pseudo 625982951 LOC116898057 ATP synthase subunit g, mitochondrial-like 4 86608914 86609224 - 116898057 MODEL JAAIVD010000003 pseudo 625982952 LOC116895994 peptidoglycan recognition protein 4-like 3 166986845 166992394 - 22301074 116895994 MODEL JAAIVD010000012;XM_032897021 XP_032752912 protein-coding 625982960 LOC116885016 cytoskeleton-associated protein 2-like 15 61034676 61036614 + 116885016 MODEL JAAIVD010000010 pseudo 625982961 Aurka aurora kinase A ENCODES a protein that exhibits histone H3S10 kinase activity (ortholog); molecular function activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); centrosome cycle (ortholog); centrosome localization (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Breast Neoplasms (ortholog); Chromosomal Instability (ortholog); FOUND IN axon hillock (ortholog); basolateral plasma membrane (ortholog); centrosome (ortholog) 5 145629767 145647027 + 22301074;30032202 116901080 MODEL JAAIVD010000023;XM_032902644 XP_032758535 protein-coding 625982972 LOC116910969 40S ribosomal protein S28-like 10 88691118 88691330 + 22301074;30032202 116910969 MODEL JAAIVD010000005;XM_032914689 XP_032770580 protein-coding 625982975 Rilpl2 Rab interacting lysosomal protein like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); protein transport from ciliary membrane to plasma membrane (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytosol (ortholog) 16 29394874 29407302 + 22301074;30032202 116885708 MODEL JAAIVD010000004;XM_032887017 XP_032742908 RILP-like protein 2 protein-coding 625982983 LOC116885466 40S ribosomal protein S15-like 16 28538424 28538921 + 22301074;30032202 116885466 MODEL JAAIVD010000004;XM_032886748 XP_032742639 protein-coding 625982988 LOC116889653 chaperone protein DnaK-like 22301074;30032202 116889653 MODEL JAAIVD010000045;XM_032890557 XP_032746448 protein-coding 625982989 LOC116909497 uncharacterized LOC116909497 9 94174115 94178914 + 116909497 MODEL JAAIVD010000002;XR_004389076 ncrna 625982994 Spink14 serine peptidase inhibitor Kazal type 14 (putative) 3 187587 190608 + 22301074 116895251 MODEL JAAIVD010000012;XM_032896570 XP_032752461 serine protease inhibitor Kazal-type 14 protein-coding 625983000 Ctnnal1 catenin alpha like 1 INVOLVED IN Rho protein signal transduction (ortholog); FOUND IN cytosol (ortholog) 1 94749856 94805728 + 22301074;30032202 116898122 MODEL JAAIVD010000025;XM_032899532 XP_032755423 alpha-catulin protein-coding 625983023 LOC116887484 uncharacterized LOC116887484 18 9182543 9186711 + 116887484 MODEL JAAIVD010000013;XR_004386221 ncrna 625983028 LOC116893682 glycine N-acyltransferase-like protein 2 12615787 12641029 + 22301074;30032202 116893682 MODEL JAAIVD010000001;XM_032895399 XP_032751290 protein-coding 625983038 LOC116912985 small nucleolar RNA SNORA17 11 72792615 72792745 + 116912985 MODEL JAAIVD010000006;XR_004389548 snorna 625983041 LOC116900834 40S ribosomal protein S13-like 5 49855333 49861699 + 116900834 MODEL JAAIVD010000023 pseudo 625983042 Mtus1 microtubule associated scaffold protein 1 INVOLVED IN cellular response to angiotensin (ortholog); cellular response to peptide hormone stimulus (ortholog); regulation of macrophage chemotaxis (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH breast carcinoma (ortholog); colon cancer (ortholog); gallbladder carcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleolus (ortholog) 13 46426325 46571602 + 30032202 116915051 MODEL JAAIVD010000008;XM_032919463;XM_032919464;XM_032919465;XM_032919466;XM_032919467 XP_032775354;XP_032775355;XP_032775356;XP_032775357;XP_032775358 microtubule-associated tumor suppressor 1 protein-coding 625983074 Pgp phosphoglycolate phosphatase ENCODES a protein that exhibits ADP phosphatase activity (ortholog); magnesium ion binding (ortholog); phosphoglycolate phosphatase activity (ortholog); INVOLVED IN glycerol biosynthetic process (ortholog); glycerophospholipid metabolic process (ortholog); negative regulation of gluconeogenesis (ortholog) 9 1755151 1757787 + 30032202 116910467 MODEL JAAIVD010000002;XM_032914339 XP_032770230 glycerol-3-phosphate phosphatase protein-coding 625983080 LOC116900362 olfactory receptor-like protein OLF2 5 69361535 69362473 + 22301074;30032202 116900362 MODEL JAAIVD010000023;XM_032902113 XP_032758004 protein-coding 625983084 LOC116900068 ficolin-2 5 8583529 8592005 + 30032202 116900068 MODEL JAAIVD010000023;XM_032901859 XP_032757750 protein-coding 625983097 LOC116911317 centrosomal protein of 290 kDa 1 223268646 223324610 + 30032202 116911317 MODEL JAAIVD010000025;XM_032915235 XP_032771126 protein-coding 625983137 LOC116907961 olfactory receptor 143-like 8 32025366 32026381 + 116907961 MODEL JAAIVD010000027 pseudo 625983138 LOC116889583 U6 spliceosomal RNA X 122141329 122141435 - 116889583 MODEL JAAIVD010000014;XR_004386499 snrna 625983141 Tnfrsf21 TNF receptor superfamily member 21 INVOLVED IN adaptive immune response (ortholog); apoptotic process (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Gliosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 4 86726826 86801620 - 22301074;30032202 116899151 MODEL JAAIVD010000003;XM_032900704 XP_032756595 tumor necrosis factor receptor superfamily member 21 protein-coding 625983151 Pals2 protein associated with LIN7 2, MAGUK p55 family member PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 6 90903917 90987895 - 22301074;30032202 116903828 MODEL JAAIVD010000024;XM_032906540;XR_004388301;XR_004388302;XR_004388303;XR_004388304 XP_032762431 Mpp6 MAGUK p55 subfamily member 6;membrane palmitoylated protein 6;protein associated with LIN7 2, MAGUK family member protein-coding 625983176 Sh3tc1 SH3 domain and tetratricopeptide repeats 1 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 11 69338822 69380511 + 22301074 116912524 MODEL JAAIVD010000006;XM_032916615 XP_032772506 SH3 domain and tetratricopeptide repeat-containing protein 1 protein-coding 625983198 St3gal1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1 ENCODES a protein that exhibits beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN memory B cell differentiation (ortholog); N-acetylneuraminate metabolic process (ortholog); negative regulation of activated CD8-positive, alpha-beta T cell apoptotic process (ortholog); ASSOCIATED WITH Enterovirus Infections (ortholog); FOUND IN Golgi medial cisterna membrane (ortholog); Golgi trans cisterna membrane (ortholog); trans-Golgi network membrane (ortholog) 1 241204951 241273007 - 22301074;30032202 116912314 MODEL JAAIVD010000025;XM_032916337;XM_032916347 XP_032772228;XP_032772238 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 protein-coding 625983212 LOC116908685 olfactory receptor 11L1 9 39415215 39416186 + 22301074 116908685 MODEL JAAIVD010000002;XM_032911996 XP_032767887 protein-coding 625983215 Fbxo5 F-box protein 5 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); molecular function inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response (ortholog); microtubule polymerization (ortholog); negative regulation of cellular senescence (ortholog); FOUND IN cytoplasm (ortholog); meiotic spindle (ortholog); nucleoplasm (ortholog) 2 197064677 197071785 + 22301074;30032202 116892876 MODEL JAAIVD010000001;XM_032894783 XP_032750674 F-box only protein 5 protein-coding 625983224 LOC116887980 replication factor C subunit 4-like X 69179496 69186089 - 116887980 MODEL JAAIVD010000014 pseudo 625983225 LOC116908194 40S ribosomal protein S21-like 8 59329941 59330229 - 116908194 MODEL JAAIVD010000027 pseudo 625983226 LOC116896995 glyceraldehyde-3-phosphate dehydrogenase-like 3 128225726 128226708 - 116896995 MODEL JAAIVD010000012 pseudo 625983227 LOC116890533 small nucleolar RNA SNORA17 1 202401713 202401843 + 116890533 MODEL JAAIVD010000025;XR_004386714 snorna 625983230 LOC116896512 histone H2A type 2-A 3 61043323 61043888 + 22301074;30032202 116896512 MODEL JAAIVD010000012;XM_032897693 XP_032753584 protein-coding 625983235 LOC116890436 U7 small nuclear RNA 1 229671137 229671199 - 116890436 MODEL JAAIVD010000025;XR_004386633 snrna 625983238 LOC116914718 disintegrin and metalloproteinase domain-containing protein 18 13 61776781 61842839 + 22301074;30032202 116914718 MODEL JAAIVD010000008;XM_032919147 XP_032775038 protein-coding 625983262 Adcy8 adenylate cyclase 8 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN activation of protein kinase A activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH diabetic angiopathy (ortholog); Hyperkinesis (ortholog); mood disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); axon (ortholog) 1 238958707 239170896 - 22301074;30032202 116912160 MODEL JAAIVD010000025;XM_032916083;XM_032916091;XM_032916099 XP_032771974;XP_032771982;XP_032771990 adenylate cyclase type 8 protein-coding 625983288 Rdh11 retinol dehydrogenase 11 ENCODES a protein that exhibits aldehyde dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinal metabolic process (ortholog); retinoid metabolic process (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Retinal Dystrophy, Juvenile Cataracts, and Short Stature Syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); photoreceptor inner segment (ortholog) 7 93288093 93297371 - 116905206 MODEL JAAIVD010000026;XM_032908019 XP_032763910 protein-coding 625983298 LOC116886412 60S ribosomal protein L15-like 17 21634269 21634958 + 116886412 MODEL JAAIVD010000011 pseudo 625983299 LOC116890550 small nucleolar RNA SNORA17 1 184376263 184376394 - 116890550 MODEL JAAIVD010000025;XR_004386725 snorna 625983302 Rap2a RAP2A, member of RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); establishment of protein localization (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); endolysosome (ortholog); Golgi apparatus (ortholog) 12 4320502 4345933 - 22301074;30032202 116913571 MODEL JAAIVD010000007;XM_032917790 XP_032773681 ras-related protein Rap-2a protein-coding 625983308 LOC116898123 dnaJ homolog subfamily B member 6-like 4 107324423 107325146 + 116898123 MODEL JAAIVD010000003 pseudo 625983309 Kctd4 potassium channel tetramerization domain containing 4 12 48453392 48457214 - 22301074 116913300 MODEL JAAIVD010000007;XM_032917429 XP_032773320 BTB/POZ domain-containing protein KCTD4 protein-coding 625983314 LOC116884346 elongation factor 1-alpha 1-like 15 34422414 34424196 + 116884346 MODEL JAAIVD010000010 pseudo 625983315 Csk C-terminal Src kinase ENCODES a protein that exhibits identical protein binding (ortholog); proline-rich region binding (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN adherens junction organization (ortholog); cellular response to peptide hormone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH dermatitis (ortholog); Experimental Arthritis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 8 51515694 51534945 - 22301074;30032202 116908080 MODEL JAAIVD010000027;XM_032911356 XP_032767247 tyrosine-protein kinase CSK protein-coding 625983332 LOC116897707 peptidyl-prolyl cis-trans isomerase D-like 4 25189176 25191049 + 116897707 MODEL JAAIVD010000003 pseudo 625983333 Tmem91 transmembrane protein 91 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog) 2 169118509 169124202 + 22301074;30032202 116892452 MODEL JAAIVD010000001;XM_032894157;XM_032894158;XM_032894159;XM_032894160;XM_032894161;XM_032894162;XM_032894163 XP_032750048;XP_032750049;XP_032750050;XP_032750051;XP_032750052;XP_032750053;XP_032750054 protein-coding 625983361 LOC116899057 septin-7-like 4 76916788 76918258 - 116899057 MODEL JAAIVD010000003;XR_004387687 pseudo 625983364 LOC116905773 calmodulin-lysine N-methyltransferase-like 7 7830555 7840378 - 116905773 MODEL JAAIVD010000026;XM_032908743;XM_032908744 XP_032764634;XP_032764635 protein-coding 625983376 Nap1l2 nucleosome assembly protein 1 like 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase regulator activity (ortholog); histone binding (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); regulation of stem cell division (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 6 39802788 39805300 - 22301074;30032202 116903444 MODEL JAAIVD010000024;XM_032905999 XP_032761890 nucleosome assembly protein 1-like 2 protein-coding 625983381 Wfs1 wolframin ER transmembrane glycoprotein ENCODES a protein that exhibits ATPase binding (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autistic disorder (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); secretory granule (ortholog) 11 68159630 68184200 + 22301074;30032202 116912452 MODEL JAAIVD010000006;XM_032916520 XP_032772411 wolframin protein-coding 625983393 Grm5 glutamate metabotropic receptor 5 ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); INVOLVED IN associative learning (ortholog); cellular response to amyloid-beta (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic neuropathy (ortholog); FOUND IN astrocyte projection (ortholog); cytoplasm (ortholog); dendrite (ortholog) 2 113137118 113670109 - 30032202 116891867 MODEL JAAIVD010000001;XM_032893267;XM_032893268 XP_032749158;XP_032749159 metabotropic glutamate receptor 5 protein-coding 625983410 LOC116883393 cytochrome c, somatic-like 14 11291451 11292613 - 22301074;30032202 116883393 MODEL JAAIVD010000009;XM_032884516 XP_032740407 protein-coding 625983415 LOC116887427 RLA class II histocompatibility antigen, DP alpha-1 chain ENCODES a protein that exhibits peptide antigen binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); cellular response to type II interferon (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH allergic asthma (ortholog); asthma (ortholog); Chronic Hepatitis B (ortholog); FOUND IN cell surface (ortholog); MHC class II protein complex (ortholog) 18 8235976 8241375 - 22301074;30032202 116887427 MODEL JAAIVD010000013;XM_032889043 XP_032744934 protein-coding 625983423 LOC116889893 vomeronasal type-2 receptor 116-like 1 159281500 159291030 - 116889893 MODEL JAAIVD010000025 pseudo 625983424 Elp5 elongator acetyltransferase complex subunit 5 INVOLVED IN positive regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); elongator holoenzyme complex (ortholog) 9 49577034 49588798 - 22301074;30032202 116910566 MODEL JAAIVD010000002;XM_032914480;XM_032914482 XP_032770371;XP_032770373 elongator complex protein 5 protein-coding 625983439 LOC116899891 small nucleolar RNA SNORA17 4 38411432 38411568 - 116899891 MODEL JAAIVD010000003;XR_004387871 snorna 625983442 LOC116895738 ATP synthase F(0) complex subunit C1, mitochondrial-like 3 31843810 31844421 - 116895738 MODEL JAAIVD010000012 pseudo 625983443 LOC116887174 olfactory receptor 2H1 18 10083679 10084617 - 22301074 116887174 MODEL JAAIVD010000013;XM_032888725 XP_032744616 protein-coding 625983446 LOC116894712 uncharacterized LOC116894712 2 230188182 230192795 + 22301074 116894712 MODEL JAAIVD010000001;XM_032896410 XP_032752301 uncharacterized protein LOC116894712 protein-coding 625983450 Chadl chondroadherin like ENCODES a protein that exhibits collagen binding (ortholog); collagen fibril binding (ortholog); INVOLVED IN negative regulation of chondrocyte differentiation (ortholog); negative regulation of collagen fibril organization (ortholog); ASSOCIATED WITH Osteoarthritis, Hip (ortholog); FOUND IN extracellular matrix (ortholog) 1 251432073 251444698 - 22301074;30032202 116914018 MODEL JAAIVD010000025;XM_032918288 XP_032774179 chondroadherin-like protein protein-coding 625983460 Grn granulin precursor ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN astrocyte activation involved in immune response (ortholog); blastocyst hatching (ortholog); chondrocyte proliferation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 9 61725875 61732077 + 30032202 116909592 MODEL JAAIVD010000002;XM_032913215 XP_032769106 progranulin protein-coding 625983477 Abce1 ATP binding cassette subfamily E member 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); CTPase activity (ortholog); endoribonuclease inhibitor activity (ortholog); INVOLVED IN CAT tailing (ortholog); negative regulation of endoribonuclease activity (ortholog); protein ufmylation (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH breast carcinoma (ortholog); Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 17 20391274 20414920 + 22301074;30032202 116886050 MODEL JAAIVD010000011;XM_032887353;XM_032887354 XP_032743244;XP_032743245 ATP-binding cassette sub-family E member 1 protein-coding 625983503 LOC116883896 uracil-DNA glycosylase-like 14 41885257 41886905 - 116883896 MODEL JAAIVD010000009 pseudo 625983504 LOC116890393 U6 spliceosomal RNA 1 33413375 33413480 - 116890393 MODEL JAAIVD010000025;XR_004386598 snrna 625983507 Ccsap centriole, cilia and spindle associated protein ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic spindle microtubule depolymerization (ortholog); regulation of mitotic spindle assembly (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); centriole (ortholog) 17 43385037 43402588 - 22301074;30032202 116886271 MODEL JAAIVD010000011;XM_032887695 XP_032743586 centriole, cilia and spindle-associated protein protein-coding 625983515 Tktl2 transketolase like 2 FOUND IN cytoplasm (ortholog) 13 22738447 22740465 - 30032202 116914879 MODEL JAAIVD010000008;XM_032919321;XM_032919322 XP_032775212;XP_032775213 transketolase-like protein 2 protein-coding 625983524 LOC116883536 60S ribosomal protein L19-like 14 37812589 37813174 - 116883536 MODEL JAAIVD010000009 pseudo 625983525 LOC116909780 uncharacterized LOC116909780 9 54188619 54208344 + 116909780 MODEL JAAIVD010000002;XR_004389095 ncrna 625983529 LOC116906385 small nucleolar RNA SNORD113/SNORD114 family 7 127252362 127252436 + 116906385 MODEL JAAIVD010000026;XR_004388655 snorna 625983532 Tlr8 toll like receptor 8 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); negative regulation of interleukin-12 production (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); anogenital venereal wart (ortholog); contact dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog) X 30958047 30961134 + 22301074;30032202 116889102 MODEL JAAIVD010000014;XM_032890270 XP_032746161 toll-like receptor 8 protein-coding 625983535 Eloc elongin C ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription elongation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); target-directed miRNA degradation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog); VCB complex (ortholog) 1 136157707 136174245 - 22301074;30032202 116903561 MODEL JAAIVD010000025;XM_032906182 XP_032762073 elongin-C protein-coding 625983543 Pfdn4 prefoldin subunit 4 ENCODES a protein that exhibits amyloid-beta binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); protein folding (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 5 147383509 147391513 - 22301074;30032202 116902291 MODEL JAAIVD010000023;XM_032904726 XP_032760617 protein-coding 625983551 LOC116889759 putative methyltransferase C9orf114 homolog 30032202 116889759 MODEL JAAIVD010000081;XM_032890621 XP_032746512 protein-coding 625983552 LOC116908439 U2 spliceosomal RNA 8 29194408 29194619 + 116908439 MODEL JAAIVD010000027 pseudo 625983553 LOC116883900 small ubiquitin-related modifier 1-like 14 43238819 43241108 + 116883900 MODEL JAAIVD010000009 pseudo 625983554 LOC116913915 cytochrome c, somatic-like 12 72692080 72692393 + 116913915 MODEL JAAIVD010000007 pseudo 625983555 Sgsm3 small G protein signaling modulator 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); plasma membrane to endosome transport (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); gap junction (ortholog) 1 250733414 250765850 + 22301074 116913918 MODEL JAAIVD010000025;XM_032918190;XM_032918196 XP_032774081;XP_032774087 protein-coding 625983584 LOC116889945 olfactory receptor 6C76-like 1 161432636 161433604 - 22301074;30032202 116889945 MODEL JAAIVD010000025;XM_032890751 XP_032746642 protein-coding 625983589 Mrpl40 mitochondrial ribosomal protein L40 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 4 4117405 4123366 - 30032202 116898680 MODEL JAAIVD010000003;XM_032899932 XP_032755823 39S ribosomal protein L40, mitochondrial protein-coding 625983597 Pcgf3 polycomb group ring finger 3 ENCODES a protein that exhibits histone H2AK119 ubiquitin ligase activity (ortholog); INVOLVED IN random inactivation of X chromosome (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 11 18240320 18283484 + 30032202 116911955 MODEL JAAIVD010000006;XM_032915876 XP_032771767 polycomb group RING finger protein 3 protein-coding 625983612 LOC116898334 ferritin light chain 1-like 4 45247624 45248307 - 116898334 MODEL JAAIVD010000003 pseudo 625983613 Rnf115 ring finger protein 115 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi to plasma membrane transport (ortholog); negative regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 3 60513258 60579671 - 30032202 116896498 MODEL JAAIVD010000012;XM_032897673 XP_032753564 E3 ubiquitin-protein ligase RNF115 protein-coding 625983626 Efhc2 EF-hand domain containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH autistic disorder (ortholog); ornithine carbamoyltransferase deficiency (ortholog); X-Linked Intellectual Developmental Disorders (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); ciliary basal body (ortholog) X 4703847 4900147 - 30032202 116889208 MODEL JAAIVD010000014;XM_032890363 XP_032746254 EF-hand domain-containing family member C2 protein-coding 625983645 Mau2 MAU2 sister chromatid cohesion factor ENCODES a protein that exhibits cohesin loader activity (ortholog); INVOLVED IN maintenance of mitotic sister chromatid cohesion (ortholog); mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 13 12284355 12309983 - 22301074;30032202 116914888 MODEL JAAIVD010000008;XM_032919330;XM_032919331;XM_032919332 XP_032775221;XP_032775222;XP_032775223 MAU2 chromatid cohesion factor homolog protein-coding 625983675 LOC116884933 FH1/FH2 domain-containing protein 3-like 15 19106888 19167390 - 30032202 116884933 MODEL JAAIVD010000010;XM_032886147 XP_032742038 protein-coding 625983681 LOC116884926 MLV-related proviral Env polyprotein-like 15 12739130 12772664 - 116884926 MODEL JAAIVD010000010;XM_032886146 XP_032742037 protein-coding 625983685 LOC116905408 dihydrolipoyl dehydrogenase, mitochondrial-like 7 119948320 119949833 + 116905408 MODEL JAAIVD010000026 pseudo 625983686 LOC116886420 metallothionein-1 17 1075964 1082987 + 22301074;30032202 116886420 MODEL JAAIVD010000011;XM_032887903;XM_032887904;XM_032887905 XP_032743794;XP_032743795;XP_032743796 metallothionein-2 protein-coding 625983702 LOC116901558 uncharacterized LOC116901558 5 56117138 56118931 - 116901558 MODEL JAAIVD010000023;XR_004388006 ncrna 625983706 Gfra4 GDNF family receptor alpha 4 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of ossification (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 5 110769904 110773286 - 30032202 116901982 MODEL JAAIVD010000023;XM_032904227;XM_032904228;XM_032904229 XP_032760118;XP_032760119;XP_032760120 GDNF family receptor alpha-4 protein-coding 625983721 Tom1l1 target of myb1 like 1 membrane trafficking protein ENCODES a protein that exhibits clathrin binding (ortholog); protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); negative regulation of mitotic nuclear division (ortholog); positive regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) 9 80153367 80195469 + 22301074;30032202 116908481 MODEL JAAIVD010000002;XM_032911634 XP_032767525 TOM1-like protein 1 protein-coding 625983740 Slc16a1 solute carrier family 16 member 1 ENCODES a protein that exhibits carboxylic acid transmembrane transporter activity (ortholog); identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); INVOLVED IN behavioral response to nutrient (ortholog); carboxylic acid transmembrane transport (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Colonic Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 3 53465106 53485483 - 22301074;30032202 116896430 MODEL JAAIVD010000012;XM_032897581 XP_032753472 monocarboxylate transporter 1 protein-coding 625983749 Gsdme gasdermin E ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); wide pore channel activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); cellular response to virus (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 5 (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 6 90843298 90900356 + 30032202 116903827 MODEL JAAIVD010000024;XM_032906538 XP_032762429 gasdermin-E protein-coding 625983764 Ece1 endothelin converting enzyme 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis involved in innervation (ortholog); blood vessel diameter maintenance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); autonomic nervous system disease (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); external side of plasma membrane (ortholog) 1 20256110 20357801 - 22301074;30032202 116894093 MODEL JAAIVD010000025;XM_032895816;XM_032895822 XP_032751707;XP_032751713 endothelin-converting enzyme 1 protein-coding 625983791 Pck1 phosphoenolpyruvate carboxykinase 1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN forkhead class A signaling pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); celiac disease (ortholog); Chronic Intermittent Hypoxia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 144834965 144840977 - 22301074;30032202 116902279 MODEL JAAIVD010000023;XM_032904709 XP_032760600 phosphoenolpyruvate carboxykinase, cytosolic [GTP] protein-coding 625983805 LOC116886879 heat shock cognate 71 kDa protein-like 18 28736201 28738696 + 116886879 MODEL JAAIVD010000013 pseudo 625983806 LOC116900136 olfactory receptor 1N2-like 5 14580613 14581565 + 22301074 116900136 MODEL JAAIVD010000023;XM_032901910 XP_032757801 protein-coding 625983809 Cdkn2aipnl CDKN2A interacting protein N-terminal like ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 9 34558114 34567364 + 116909591 MODEL JAAIVD010000002;XM_032913214 XP_032769105 CDKN2AIP N-terminal-like protein protein-coding 625983816 Cdk1 cyclin dependent kinase 1 ENCODES a protein that exhibits chromatin binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein kinase activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); chromosome condensation (ortholog); cilium disassembly (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); cyclin A2-CDK1 complex (ortholog); cyclin B1-CDK1 complex (ortholog) 18 17503601 17518652 + 22301074;30032202 116887384 MODEL JAAIVD010000013;XM_032888979 XP_032744870 cyclin-dependent kinase 1 protein-coding 625983828 LOC116913037 U6 spliceosomal RNA 11 23800882 23800988 - 116913037 MODEL JAAIVD010000006;XR_004389574 snrna 625983831 Mthfd1l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like ENCODES a protein that exhibits ATP binding (ortholog); formate-tetrahydrofolate ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate biosynthetic process (ortholog); embryonic neurocranium morphogenesis (ortholog); embryonic viscerocranium morphogenesis (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); neural tube defect (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 198763662 198953155 + 22301074;30032202 116892888 MODEL JAAIVD010000001;XM_032894796 XP_032750687 monofunctional C1-tetrahydrofolate synthase, mitochondrial protein-coding 625983863 Bmp2k BMP2 inducible kinase ENCODES a protein that exhibits phosphatase regulator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 11 7180959 7276777 - 22301074 116912801 MODEL JAAIVD010000006;XM_032916964;XM_032916965;XM_032916966 XP_032772855;XP_032772856;XP_032772857 BMP-2-inducible protein kinase protein-coding 625983888 Dgkd diacylglycerol kinase delta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Lennox-Gastaut syndrome (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN clathrin-coated pit (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 4 159966075 160052559 + 22301074;30032202 116899613 MODEL JAAIVD010000003;XM_032901572;XM_032901574;XM_032901575;XM_032901576 XP_032757463;XP_032757465;XP_032757466;XP_032757467 protein-coding 625983930 LOC116911626 60S ribosomal protein L15-like 10 32266032 32269467 - 116911626 MODEL JAAIVD010000005 pseudo 625983931 F2rl2 coagulation factor II thrombin receptor like 2 ENCODES a protein that exhibits proteinase-activated receptor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ligand-gated ion channel signaling pathway (ortholog); positive regulation of insulin secretion (ortholog); PARTICIPATES IN insulin signaling pathway; protease mediated signaling via protease-activated receptor 3; FOUND IN apical plasma membrane (ortholog); protein-containing complex (ortholog) 3 200833241 200838024 - 22301074;30032202 116897278 MODEL JAAIVD010000012;XM_032899011 XP_032754902 proteinase-activated receptor 3 protein-coding 625983937 LOC116884307 protocadherin alpha-4 15 7413635 7421424 - 22301074 116884307 MODEL JAAIVD010000010;XM_032885415 XP_032741306 protein-coding 625983942 Impdh1 inosine monophosphate dehydrogenase 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); IMP dehydrogenase activity (ortholog); INVOLVED IN 'de novo' XMP biosynthetic process (ortholog); GMP biosynthetic process (ortholog); lymphocyte proliferation (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 110344822 110359932 + 22301074;30032202 116904020 MODEL JAAIVD010000024;XM_032906848;XM_032906849 XP_032762739;XP_032762740 inosine-5'-monophosphate dehydrogenase 1 protein-coding 625983963 Psmb8 proteasome 20S subunit beta 8 INVOLVED IN antigen processing and presentation (ortholog); fat cell differentiation (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN proteasome complex (ortholog); proteasome core complex (ortholog); spermatoproteasome complex (ortholog) 18 8084787 8087920 - 22301074 116887420 MODEL JAAIVD010000013;XM_032889031 XP_032744922 proteasome subunit beta type-8 protein-coding 625983973 LOC116910562 dual specificity protein phosphatase 26-like 9 57029784 57030516 - 116910562 MODEL JAAIVD010000002 pseudo 625983974 Gabrb3 gamma-aminobutyric acid type A receptor subunit beta3 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); chloride channel activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to histamine (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Angelman syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendritic spine (ortholog) 2 141460704 141696691 - 22301074;30032202 116892037 MODEL JAAIVD010000001;XM_032893497;XM_032893498 XP_032749388;XP_032749389 gamma-aminobutyric acid receptor subunit beta-3 protein-coding 625983992 Znf710 zinc finger protein 710 2 120164848 120233658 - 30032202 116891930 MODEL JAAIVD010000001;XM_032893368;XM_032893369;XM_032893370;XM_032893371 XP_032749259;XP_032749260;XP_032749261;XP_032749262 protein-coding 625984010 LOC116892238 uncharacterized LOC116892238 2 156170413 156181117 + 116892238 MODEL JAAIVD010000001;XR_004386930;XR_004386931;XR_004386932 ncrna 625984020 Arhgdia Rho GDP dissociation inhibitor alpha ENCODES a protein that exhibits fatty acid binding (ortholog); Hsp90 protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to redox state (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); chronic kidney disease (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); immunological synapse (ortholog); membrane (ortholog) 9 63441216 63444762 + 22301074;30032202 116909101 MODEL JAAIVD010000002;XM_032912572;XM_032912573;XM_032912574 XP_032768463;XP_032768464;XP_032768465 rho GDP-dissociation inhibitor 1 protein-coding 625984038 Hs3st5 heparan sulfate-glucosamine 3-sulfotransferase 5 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); negative regulation of coagulation (ortholog); protein sulfation (ortholog); ASSOCIATED WITH melanoma (ortholog) 18 36785541 36913658 + 30032202 116886941 MODEL JAAIVD010000013;XM_032888438 XP_032744329 heparan sulfate glucosamine 3-O-sulfotransferase 5 protein-coding 625984045 LOC116908375 small nucleolar RNA SNORA55 8 33945798 33945917 + 116908375 MODEL JAAIVD010000027;XR_004388922 snorna 625984048 LOC116894282 60S ribosomal protein L13-like 2 125761839 125762470 - 116894282 MODEL JAAIVD010000001 pseudo 625984049 LOC116915093 solute carrier family 25 member 39-like 13 18937981 18939039 + 116915093 MODEL JAAIVD010000008 pseudo 625984050 Hmgn5 high mobility group nucleosome binding domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin organization (ortholog); glutathione metabolic process (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); high grade glioma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 63208421 63216850 - 22301074;30032202 116888478 MODEL JAAIVD010000014;XM_032889755 XP_032745646 high mobility group nucleosome-binding domain-containing protein 5 protein-coding 625984061 Glrb glycine receptor beta ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); extracellularly glycine-gated ion channel activity (ortholog); glycine binding (ortholog); INVOLVED IN acrosome reaction (ortholog); adult walking behavior (ortholog); chemical synaptic transmission (ortholog); PARTICIPATES IN Inhibitory synaptic transmission pathway; ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); hyperekplexia (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glycine-gated chloride channel complex (ortholog) 3 72606784 72676864 + 22301074;30032202 116896755 MODEL JAAIVD010000012;XM_032898199 XP_032754090 glycine receptor subunit beta protein-coding 625984073 Xkr9 XK related 9 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); FOUND IN plasma membrane (ortholog) 1 148294260 148317319 + 30032202 116904002 MODEL JAAIVD010000025;XM_032906815 XP_032762706 XK-related protein 9 protein-coding 625984080 LOC116893685 olfactory receptor 5B3-like 2 12685862 12686803 + 22301074;30032202 116893685 MODEL JAAIVD010000001;XM_032895401 XP_032751292 protein-coding 625984084 C9H17orf78 chromosome 9 C17orf78 homolog 9 86514223 86531511 + 116910578 MODEL JAAIVD010000002;XM_032914501 XP_032770392 uncharacterized protein C17orf78 homolog protein-coding 625984094 LOC116913564 mast cell protease 1-like 12 68935261 68937673 + 22301074;30032202 116913564 MODEL JAAIVD010000007;XM_032917777 XP_032773668 protein-coding 625984102 Acp6 acid phosphatase 6, lysophosphatidic ENCODES a protein that exhibits lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); lysobisphosphatidic acid metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 3 60155905 60172387 - 30032202 116896490 MODEL JAAIVD010000012;XM_032897664 XP_032753555 lysophosphatidic acid phosphatase type 6 protein-coding 625984116 LOC116900817 40S ribosomal protein S14-like 5 37088730 37089176 + 116900817 MODEL JAAIVD010000023 pseudo 625984117 Mettl26 methyltransferase like 26 9 3139670 3150492 + 116908478 MODEL JAAIVD010000002;XM_032911630;XM_032911631 XP_032767521;XP_032767522 methyltransferase-like 26 protein-coding 625984130 Carmil3 capping protein regulator and myosin 1 linker 3 INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 12 69500055 69518853 - 22301074;30032202 116913303 MODEL JAAIVD010000007;XM_032917431;XM_032917432;XM_032917433;XM_032917434;XM_032917435;XM_032917436;XM_032917437;XM_032917438;XM_032917439;XM_032917440 XP_032773322;XP_032773323;XP_032773324;XP_032773325;XP_032773326;XP_032773327;XP_032773328;XP_032773329;XP_032773330;XP_032773331 capping protein, Arp2/3 and myosin-I linker protein 3 protein-coding 625984191 Glul glutamate-ammonia ligase ENCODES a protein that exhibits ATP binding (ortholog); dynein light chain binding (ortholog); glutamate binding (ortholog); INVOLVED IN ammonia assimilation cycle (ortholog); cell population proliferation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Carotid Atherosclerosis (ortholog); congenital glutamine deficiency (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cytoplasm (ortholog) 10 33327574 33337260 + 22301074;30032202 116910877 MODEL JAAIVD010000005;XM_032914642 XP_032770533 glutamine synthetase protein-coding 625984202 LOC116899774 U6 spliceosomal RNA 4 34855698 34855801 - 116899774 MODEL JAAIVD010000003;XR_004387787 snrna 625984205 Tmem132a transmembrane protein 132A ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); negative regulation of programmed cell death (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 2 10337850 10349444 - 116890973 MODEL JAAIVD010000001;XM_032891637;XM_032891638 XP_032747528;XP_032747529 protein-coding 625984224 LOC116886660 40S ribosomal protein S20-like 17 27321681 27322200 - 116886660 MODEL JAAIVD010000011 pseudo 625984225 LOC116909580 olfactory receptor 2Y1-like 9 32169159 32170094 + 22301074 116909580 MODEL JAAIVD010000002;XM_032913201 XP_032769092 protein-coding 625984228 LOC116891698 28S ribosomal protein S18c, mitochondrial-like 2 95835096 95835564 - 22301074;30032202 116891698 MODEL JAAIVD010000001;XM_032892965 XP_032748856 protein-coding 625984233 LOC116900885 olfactory receptor 4C11-like 5 69907629 69908567 + 22301074 116900885 MODEL JAAIVD010000023;XM_032902561 XP_032758452 protein-coding 625984236 Acp1 acid phosphatase 1 ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; riboflavin metabolic pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); conduct disorder (ortholog); coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 7 44294451 44309889 - 22301074 116904942 MODEL JAAIVD010000026;XM_032907587;XM_032907588 XP_032763478;XP_032763479 low molecular weight phosphotyrosine protein phosphatase protein-coding 625984248 LOC116894019 olfactory receptor 52A5-like 2 101909187 101910137 - 22301074 116894019 MODEL JAAIVD010000001;XM_032895734 XP_032751625 protein-coding 625984251 LOC116884665 proline-rich nuclear receptor coactivator 1-like 15 19831786 19833408 - 116884665 MODEL JAAIVD010000010 pseudo 625984252 Sdccag8 SHH signaling and ciliogenesis regulator SDCCAG8 INVOLVED IN establishment of cell polarity (ortholog); microtubule organizing center organization (ortholog); neuron migration (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 16 (ortholog); cystic kidney disease (ortholog); FOUND IN cell-cell junction (ortholog); centriolar satellite (ortholog); centriole (ortholog) 10 55294582 55489874 + 22301074;30032202 116911216 MODEL JAAIVD010000005;XM_032915108 XP_032770999 serologically defined colon cancer antigen 8 protein-coding 625984275 LOC116895938 mediator of RNA polymerase II transcription subunit 14-like 3 131696717 131806650 + 116895938 MODEL JAAIVD010000012 pseudo 625984276 LOC116905400 uncharacterized LOC116905400 7 119004627 119017237 - 116905400 MODEL JAAIVD010000026;XR_004388522 ncrna 625984281 LOC116895484 arylacetamide deacetylase-like 2 3 95281996 95313800 - 22301074 116895484 MODEL JAAIVD010000012;XM_032896745 XP_032752636 protein-coding 625984288 LOC116907547 nucleophosmin-like 8 68634716 68635575 + 116907547 MODEL JAAIVD010000027 pseudo 625984289 Zc3h11a zinc finger CCCH-type containing 11A INVOLVED IN poly(A)+ mRNA export from nucleus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN transcription export complex (ortholog) 10 2047572 2072880 + 22301074 116911703 MODEL JAAIVD010000005;XM_032915667 XP_032771558 zinc finger CCCH domain-containing protein 11A protein-coding 625984308 LOC116899141 putative uncharacterized protein ZNRD1-AS1 4 84983982 84985179 + 116899141 MODEL JAAIVD010000003;XM_032900681 XP_032756572 protein-coding 625984313 Cry1 cryptochrome circadian regulator 1 ENCODES a protein that exhibits deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); alcohol withdrawal syndrome (ortholog); antidepressant type abuse (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 1 163253955 163309889 + 30032202 116907361 MODEL JAAIVD010000025;XM_032910312 XP_032766203 cryptochrome-1 protein-coding 625984330 Ctnnbl1 catenin beta like 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); somatic diversification of immunoglobulins (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colorectal cancer (ortholog); immunodeficiency 99 (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 137078405 137235770 + 30032202 116902230 MODEL JAAIVD010000023;XM_032904637 XP_032760528 beta-catenin-like protein 1 protein-coding 625984350 LOC116892728 olfactory receptor 10A7-like 2 179584225 179585179 + 22301074 116892728 MODEL JAAIVD010000001;XM_032894602 XP_032750493 protein-coding 625984353 LOC116897398 U6 spliceosomal RNA 3 218602572 218602678 - 116897398 MODEL JAAIVD010000012;XR_004387442 snrna 625984356 Pdcd2 programmed cell death 2 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of hematopoietic stem cell proliferation (ortholog); programmed cell death (ortholog) 14 468415 474172 + 22301074;30032202 116883873 MODEL JAAIVD010000009;XM_032885139 XP_032741030 programmed cell death protein 2 protein-coding 625984366 Cks2 CDC28 protein kinase regulatory subunit 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN fibroblast proliferation (ortholog); meiosis I (ortholog); mitotic cell cycle phase transition (ortholog); ASSOCIATED WITH COVID-19 (ortholog); polycystic ovary syndrome (ortholog) 14 70016780 70022447 + 30032202 116883632 MODEL JAAIVD010000009;XM_032884822 XP_032740713 cyclin-dependent kinases regulatory subunit 2 protein-coding 625984373 Gemin4 gem nuclear organelle associated protein 4 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); cataract (ortholog); Developmental Disabilities (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 94916471 94927730 - 30032202 116908649 MODEL JAAIVD010000002;XM_032911915;XM_032911916;XR_004389006;XR_004389007 XP_032767806;XP_032767807 gem-associated protein 4 protein-coding 625984388 LOC116893257 pancreatic progenitor cell differentiation and proliferation factor-like 2 135238690 135239088 - 116893257 MODEL JAAIVD010000001 pseudo 625984389 Coro1b coronin 1B ENCODES a protein that exhibits actin filament binding (ortholog); Arp2/3 complex binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament bundle assembly (ortholog); FOUND IN actin filament (ortholog); cell leading edge (ortholog); cell periphery (ortholog) 2 3488463 3493995 - 30032202 116890784 MODEL JAAIVD010000001;XM_032891254;XM_032891255;XM_032891256 XP_032747145;XP_032747146;XP_032747147 coronin-1B protein-coding 625984410 Smco4 single-pass membrane protein with coiled-coil domains 4 8 11312916 11313591 + 116907899 MODEL JAAIVD010000027;XM_032911097 XP_032766988 single-pass membrane and coiled-coil domain-containing protein 4 protein-coding 625984415 LOC116899776 60S ribosomal protein L23a-like 1 107878191 107879487 + 116899776 MODEL JAAIVD010000025 pseudo 625984416 LOC116908333 U6 spliceosomal RNA 8 16675076 16675182 - 116908333 MODEL JAAIVD010000027;XR_004388888 snrna 625984419 LOC116890384 eukaryotic translation initiation factor 3 subunit I-like 1 269016192 269024327 + 116890384 MODEL JAAIVD010000025 pseudo 625984420 LOC116885844 NEDD8-activating enzyme E1 catalytic subunit-like 16 2094458 2095705 - 116885844 MODEL JAAIVD010000004 pseudo 625984421 LOC116888110 glyceraldehyde-3-phosphate dehydrogenase-like X 100794791 100795748 - 116888110 MODEL JAAIVD010000014 pseudo 625984422 LOC116903791 killer cell lectin-like receptor 7 6 17072973 17077540 + 116903791 MODEL JAAIVD010000024;XM_032906484 XP_032762375 protein-coding 625984428 LOC116885979 U4 spliceosomal RNA 16 8816467 8816580 + 116885979 MODEL JAAIVD010000004 pseudo 625984429 Rlbp1 retinaldehyde binding protein 1 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Bothnia retinal dystrophy (ortholog); congenital stationary night blindness (ortholog); Eye Abnormalities (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); cytosol (ortholog) 2 120864950 120875624 + 30032202 116891945 MODEL JAAIVD010000001;XM_032893385 XP_032749276 retinaldehyde-binding protein 1 protein-coding 625984441 LOC116898024 solute carrier family 22 member 19-like 4 79451763 79495326 + 22301074;30032202 116898024 MODEL JAAIVD010000003;XM_032899413;XM_032899414 XP_032755304;XP_032755305 protein-coding 625984458 Maea macrophage erythroblast attacher, E3 ubiquitin ligase ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cytoskeleton organization (ortholog); enucleate erythrocyte development (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN actin cytoskeleton (ortholog); actomyosin contractile ring (ortholog); cytoskeleton (ortholog) 11 71477149 71510429 - 22301074;30032202 116912219 MODEL JAAIVD010000006;XM_032916175 XP_032772066 E3 ubiquitin-protein transferase MAEA protein-coding 625984469 Arhgef6 Rac/Cdc42 guanine nucleotide exchange factor 6 INVOLVED IN lamellipodium assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cell-cell junction (ortholog); lamellipodium (ortholog) X 117668249 117786048 - 22301074 116888838 MODEL JAAIVD010000014;XM_032890111 XP_032746002 rho guanine nucleotide exchange factor 6 protein-coding 625984497 LOC116889774 60S ribosomal protein L7-like 1 149248516 149249306 - 116889774 MODEL JAAIVD010000025 pseudo 625984498 Hnrnpc heterogeneous nuclear ribonucleoprotein C ENCODES a protein that exhibits deaminase binding (ortholog); enzyme inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); atherosclerosis (ortholog); autosomal dominant intellectual developmental disorder 74 (ortholog); FOUND IN actin cytoskeleton (ortholog); catalytic step 2 spliceosome (ortholog); cytosol (ortholog) 12 71786976 71816110 + 22301074;30032202 116913592 MODEL JAAIVD010000007;XM_032917827;XM_032917828;XM_032917829;XM_032917830;XM_032917831;XM_032917832;XM_032917833;XM_032917834;XM_032917835;XM_032917837;XM_032917838;XM_032917839 XP_032773718;XP_032773719;XP_032773720;XP_032773721;XP_032773722;XP_032773723;XP_032773724;XP_032773725;XP_032773726;XP_032773728;XP_032773729;XP_032773730 heterogeneous nuclear ribonucleoproteins C1/C2 protein-coding 625984536 Ect2 epithelial cell transforming 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); activation of protein kinase activity (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); centralspindlin complex (ortholog) 3 34155245 34208160 - 22301074;30032202 116896284 MODEL JAAIVD010000012;XM_032897363;XM_032897365 XP_032753254;XP_032753256 protein ECT2 protein-coding 625984567 LOC116906278 prothymosin alpha-like 7 37427304 37427581 + 116906278 MODEL JAAIVD010000026 pseudo 625984568 Med25 mediator complex subunit 25 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); nuclear retinoid X receptor binding (ortholog); transcription coactivator binding (ortholog); INVOLVED IN negative regulation of fibroblast proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of mediator complex assembly (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autistic disorder (ortholog); Basel-Vanagaite-Smirin-Yosef syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN core mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 154651206 154667004 + 30032202 116892188 MODEL JAAIVD010000001;XM_032893712;XM_032893713;XM_032893714 XP_032749603;XP_032749604;XP_032749605 mediator of RNA polymerase II transcription subunit 25 protein-coding 625984597 LOC116911861 U2 spliceosomal RNA 10 80808742 80808945 - 116911861 MODEL JAAIVD010000005 pseudo 625984598 Stambp STAM binding protein ENCODES a protein that exhibits deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN mitotic cytokinesis (ortholog); negative regulation of hippocampal neuron apoptotic process (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH brain disease (ortholog); Capillary Malformation-Arteriovenous Malformation (ortholog); Developmental Disabilities (ortholog); FOUND IN cleavage furrow (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 62651712 62676030 + 22301074;30032202 116903603 MODEL JAAIVD010000024;XM_032906243 XP_032762134 STAM-binding protein protein-coding 625984612 LOC116908908 uncharacterized LOC116908908 9 47524143 47525635 + 116908908 MODEL JAAIVD010000002;XR_004389039 ncrna 625984616 Mcoln2 mucolipin TRP cation channel 2 ENCODES a protein that exhibits identical protein binding (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN macrophage migration (ortholog); neutrophil migration (ortholog); positive regulation of chemokine (C-C motif) ligand 5 production (ortholog); FOUND IN recycling endosome (ortholog) 3 14705809 14752963 - 30032202 116895219 MODEL JAAIVD010000012;XM_032896549 XP_032752440 mucolipin 2;mucolipin-2 protein-coding 625984633 Tmem254 transmembrane protein 254 13 2052594 2056298 - 116914748 MODEL JAAIVD010000008;XM_032919194;XM_032919195 XP_032775085;XP_032775086 protein-coding 625984644 Tcf4 transcription factor 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN endothelial cell activation (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Corneal Dystrophy, Fuchs Endothelial, 3 (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); beta-catenin-TCF7L2 complex (ortholog); chromatin (ortholog) 15 61583762 61929619 - 22301074;30032202 116884622 MODEL JAAIVD010000010;XM_032885763 XP_032741654 protein-coding 625984668 LOC116895853 vomeronasal type-2 receptor 1-like 3 90809352 90829037 - 116895853 MODEL JAAIVD010000012 pseudo 625984669 LOC116908602 proteasome assembly chaperone 4-like 9 58357641 58357987 + 116908602 MODEL JAAIVD010000002 pseudo 625984670 Ikzf4 IKAROS family zinc finger 4 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH alopecia areata (ortholog); encephalomyelitis (ortholog); vitiligo (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 1 156110654 156128672 - 30032202 116906283 MODEL JAAIVD010000025;XM_032909174;XM_032909184 XP_032765065;XP_032765075 zinc finger protein Eos protein-coding 625984684 Lrrc4c leucine rich repeat containing 4C ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of axonogenesis (ortholog); synaptic membrane adhesion (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); postsynaptic density membrane (ortholog) 5 74922784 75089506 + 30032202 116901665 MODEL JAAIVD010000023;XM_032903780;XM_032903781 XP_032759671;XP_032759672 leucine-rich repeat-containing protein 4C protein-coding 625984693 LOC116900740 zinc finger protein 844-like 5 142463680 142464697 + 116900740 MODEL JAAIVD010000023;XM_032902445 XP_032758336 protein-coding 625984698 LOC116903753 60S acidic ribosomal protein P2-like 6 15548788 15552832 - 116903753 MODEL JAAIVD010000024 pseudo 625984699 Limd2 LIM domain containing 2 ASSOCIATED WITH Breast Neoplasms (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 9 72957578 72960072 + 30032202 116910435 MODEL JAAIVD010000002;XM_032914279;XM_032914280 XP_032770170;XP_032770171 LIM domain-containing protein 2 protein-coding 625984711 LOC116906834 methyltransferase-like protein 9 8 38967602 38968323 - 22301074;30032202 116906834 MODEL JAAIVD010000027;XM_032909721 XP_032765612 protein-coding 625984716 LOC116884053 DNA polymerase epsilon subunit 3-like 14 57728399 57728845 - 116884053 MODEL JAAIVD010000009 pseudo 625984717 Bmper BMP binding endothelial regulator INVOLVED IN blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); BMP signaling pathway (ortholog); endothelial cell activation (ortholog); ASSOCIATED WITH Diaphanospondylodysostosis (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 8 19415355 19660416 + 22301074 116906567 MODEL JAAIVD010000027;XM_032909288 XP_032765179 BMP-binding endothelial regulator protein protein-coding 625984736 LOC116890266 arylacetamide deacetylase-like 4 1 14063475 14067437 + 116890266 MODEL JAAIVD010000025 pseudo 625984737 Rasgrp1 RAS guanyl releasing protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); B cell activation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); endometriosis (ortholog); immunodeficiency 64 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 5 95449735 95509228 - 22301074;30032202 116901774 MODEL JAAIVD010000023;XM_032903914 XP_032759805 RAS guanyl-releasing protein 1 protein-coding 625984758 LOC116898938 interferon-induced GTP-binding protein Mx2-like 4 46972925 46995422 - 22301074;30032202 116898938 MODEL JAAIVD010000003;XM_032900354 XP_032756245 protein-coding 625984776 LOC116884747 N-chimaerin-like 15 43863004 43867779 + 22301074;30032202 116884747 MODEL JAAIVD010000010;XM_032885966 XP_032741857 protein-coding 625984782 LOC116902277 uncharacterized LOC116902277 5 144388351 144390236 + 116902277 MODEL JAAIVD010000023;XR_004388060 ncrna 625984786 Med26 mediator complex subunit 26 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 13 14313449 14363796 - 22301074;30032202 116915083 MODEL JAAIVD010000008;XM_032919507 XP_032775398 mediator of RNA polymerase II transcription subunit 26 protein-coding 625984793 LOC116890390 U6 spliceosomal RNA 1 4905676 4905777 + 116890390 MODEL JAAIVD010000025;XR_004386596 snrna 625984796 Btbd9 BTB domain containing 9 INVOLVED IN adult locomotory behavior (ortholog); circadian behavior (ortholog); circadian sleep/wake cycle, non-REM sleep (ortholog); ASSOCIATED WITH intellectual disability (ortholog); restless legs syndrome (ortholog); FOUND IN glutamatergic synapse (ortholog) 18 3304842 3657595 + 22301074;30032202 116887045 MODEL JAAIVD010000013;XM_032888537 XP_032744428 BTB/POZ domain-containing protein 9 protein-coding 625984811 Lamp3 lysosomal associated membrane protein 3 INVOLVED IN lipid metabolic process (ortholog); negative regulation of proteasomal protein catabolic process (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN alveolar lamellar body membrane (ortholog); early endosome (ortholog); lysosomal membrane (ortholog) 4 4553452 4585794 - 22301074;30032202 116897797 MODEL JAAIVD010000003;XM_032899217 XP_032755108 lysosome-associated membrane glycoprotein 3 protein-coding 625984821 LOC116905759 60S ribosomal protein L9-like 7 85760815 85761475 + 116905759 MODEL JAAIVD010000026 pseudo 625984822 LOC116911847 small nucleolar RNA SNORA17 10 28909192 28909298 - 116911847 MODEL JAAIVD010000005 pseudo 625984823 LOC116914736 40S ribosomal protein S15a-like 13 53531597 53531991 - 116914736 MODEL JAAIVD010000008 pseudo 625984824 LOC116893998 olfactory receptor 51I2-like 2 101589527 101590471 + 22301074 116893998 MODEL JAAIVD010000001;XM_032895713 XP_032751604 protein-coding 625984827 LOC116895090 small nucleolar RNA SNORD107 2 139974611 139974682 + 116895090 MODEL JAAIVD010000001;XR_004387256 snorna 625984830 Nqo2 N-ribosyldihydronicotinamide:quinone dehydrogenase 2 ENCODES a protein that exhibits chloride ion binding (ortholog); dihydronicotinamide riboside quinone reductase activity (ortholog); electron transfer activity (ortholog); INVOLVED IN memory (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH agranulocytosis (ortholog); autism spectrum disorder (ortholog); bone marrow disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 14 52453273 52538208 + 30032202 116883803 MODEL JAAIVD010000009;XM_032885050 XP_032740941 N-ribosyldihydronicotinamide:quinone reductase 2;ribosyldihydronicotinamide dehydrogenase [quinone] protein-coding 625984841 LOC116909576 arachidonate 12-lipoxygenase, epidermal-type 9 49938163 49945517 - 22301074;30032202 116909576 MODEL JAAIVD010000002;XM_032913196 XP_032769087 protein-coding 625984859 LOC116894891 U6 spliceosomal RNA 2 197440607 197440710 - 116894891 MODEL JAAIVD010000001;XR_004387097 snrna 625984862 LOC116900057 60S ribosomal protein L38-like 5 5240879 5241151 + 22301074;30032202 116900057 MODEL JAAIVD010000023;XM_032901850 XP_032757741 protein-coding 625984867 LOC116893993 ubiquilin-1-like 2 101521385 101523265 + 30032202 116893993 MODEL JAAIVD010000001;XM_032895708 XP_032751599 protein-coding 625984872 Gsdma gasdermin A ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); pyroptotic inflammatory response (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 9 55757694 55770244 - 30032202 116909720 MODEL JAAIVD010000002;XM_032913390;XM_032913391 XP_032769281;XP_032769282 gasdermin-A protein-coding 625984893 Rnmt RNA guanine-7 methyltransferase ENCODES a protein that exhibits mRNA 5'-cap (guanine-N7-)-methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; FOUND IN fibrillar center (ortholog); mRNA cap methyltransferase RNMT:RAMAC complex (ortholog); mRNA capping enzyme complex (ortholog) 15 62945704 62966390 - 22301074;30032202 116885010 MODEL JAAIVD010000010;XM_032886248;XM_032886249 XP_032742139;XP_032742140 mRNA cap guanine-N7 methyltransferase protein-coding 625984913 Rpgrip1 RPGR interacting protein 1 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); eye photoreceptor cell development (ortholog); neural precursor cell proliferation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN axoneme (ortholog); ciliary rootlet (ortholog); ciliary transition zone (ortholog) 12 71730023 71786664 - 30032202 116913590 MODEL JAAIVD010000007;XM_032917819;XM_032917820;XM_032917821;XM_032917822;XM_032917823;XM_032917824 XP_032773710;XP_032773711;XP_032773712;XP_032773713;XP_032773714;XP_032773715 X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 protein-coding 625984956 LOC116883366 sentrin-specific protease 2-like 1 200522371 200523825 + 30032202 116883366 MODEL JAAIVD010000025;XM_032884513 XP_032740404 protein-coding 625984959 LOC116902166 60S ribosomal protein L27-like 5 134054929 134055420 - 116902166 MODEL JAAIVD010000023;XR_004388049 pseudo 625984962 LOC116899246 60S ribosomal protein L10a-like 4 98664507 98665190 - 22301074 116899246 MODEL JAAIVD010000003;XM_032900853 XP_032756744 protein-coding 625984966 LOC116902868 olfactory receptor 10AC1 6 98171440 98172393 - 22301074 116902868 MODEL JAAIVD010000024;XM_032905198 XP_032761089 protein-coding 625984969 LOC116890367 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like 1 264969103 264978156 + 116890367 MODEL JAAIVD010000025 pseudo 625984970 Stx17 syntaxin 17 ENCODES a protein that exhibits protein kinase binding (ortholog); protein phosphatase binding (ortholog); SNAP receptor activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); autophagosome-lysosome fusion (ortholog); ASSOCIATED WITH alopecia areata (ortholog); melanoma (ortholog); FOUND IN autolysosome membrane (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 1 101222945 101276205 + 22301074;30032202 116902031 MODEL JAAIVD010000025;XM_032904313 XP_032760204 syntaxin-17 protein-coding 625984981 LOC116894724 phosphatidylethanolamine-binding protein 1-like 2 28652118 28656923 + 116894724 MODEL JAAIVD010000001 pseudo 625984982 LOC116889130 melanoma-associated antigen 10-like X 37487285 37488247 - 30032202 116889130 MODEL JAAIVD010000014;XM_032890301 XP_032746192 protein-coding 625984986 LOC116902627 small nucleolar SNORD12/SNORD106 5 150912828 150912919 - 116902627 MODEL JAAIVD010000023;XR_004388204 snorna 625984989 Dis3l2 DIS3 like 3'-5' exoribonuclease 2 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); magnesium ion binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); mitotic cell cycle (ortholog); mitotic sister chromatid separation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); nephroblastoma (ortholog); FOUND IN cytoplasm (ortholog); P-body (ortholog) 4 158841753 159192169 + 22301074;30032202 116899596 MODEL JAAIVD010000003;XM_032901537;XM_032901538;XM_032901539;XM_032901540 XP_032757428;XP_032757429;XP_032757430;XP_032757431 DIS3-like exonuclease 2 protein-coding 625985020 LOC116915130 small nucleolar RNA SNORA17 13 21359865 21359992 - 116915130 MODEL JAAIVD010000008;XR_004389810 snorna 625985023 LOC116894559 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178300679 178308017 - 30032202 116894559 MODEL JAAIVD010000001;XM_032896270 XP_032752161 protein-coding 625985041 LOC116900305 olfactory receptor 141-like 5 63935217 63937778 - 22301074;30032202 116900305 MODEL JAAIVD010000023;XM_032902061 XP_032757952 protein-coding 625985045 Ankrd10 ankyrin repeat domain 10 FOUND IN nucleoplasm (ortholog) 13 72227193 72250226 + 22301074 116915064 MODEL JAAIVD010000008;XM_032919482;XM_032919483 XP_032775373;XP_032775374 ankyrin repeat domain-containing protein 10 protein-coding 625985058 LOC116892197 nephrocystin-4-like 1 8224458 8264076 - 30032202 116892197 MODEL JAAIVD010000025;XM_032893736 XP_032749627 protein-coding 625985073 Coq4 coenzyme Q4 ENCODES a protein that exhibits 4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); primary coenzyme Q10 deficiency 7 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 5 6937339 6945501 - 22301074;30032202 116901214 MODEL JAAIVD010000023;XM_032902930 XP_032758821 ubiquinone biosynthesis protein COQ4 homolog, mitochondrial protein-coding 625985084 Znf8 zinc finger protein 8 INVOLVED IN BMP signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 174283348 174296667 - 30032202 116892621 MODEL JAAIVD010000001;XM_032894429;XM_032894430;XM_032894431;XM_032894432 XP_032750320;XP_032750321;XP_032750322;XP_032750323 protein-coding 625985101 Togaram1 TOG array regulator of axonemal microtubules 1 INVOLVED IN cilium assembly (ortholog); positive regulation of microtubule polymerization (ortholog); ASSOCIATED WITH BROWN SYNDROME (ortholog); ciliopathy (ortholog); Joubert syndrome (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 7 78672459 78735443 + 30032202 116905101 MODEL JAAIVD010000026;XM_032907830;XM_032907831;XM_032907832;XR_004388485 XP_032763721;XP_032763722;XP_032763723 TOG array regulator of axonemal microtubules protein 1 protein-coding 625985131 LOC116908345 small nucleolar RNA SNORA62/SNORA6 family 8 111356574 111356729 + 116908345 MODEL JAAIVD010000027;XR_004388896 snorna 625985134 LOC116907781 olfactory receptor 8B12-like 8 31398372 31399301 + 22301074;30032202 116907781 MODEL JAAIVD010000027;XM_032910923 XP_032766814 protein-coding 625985137 Mlf2 myeloid leukemia factor 2 FOUND IN glutamatergic synapse (ortholog); nucleus (ortholog); synapse (ortholog) 6 22953099 22957863 - 30032202 116903268 MODEL JAAIVD010000024;XM_032905680;XM_032905681 XP_032761571;XP_032761572 protein-coding 625985154 LOC116903140 uncharacterized LOC116903140 6 11055925 11056467 - 116903140 MODEL JAAIVD010000024;XR_004388255 ncrna 625985158 LOC116907905 3-ketoacyl-CoA thiolase B, peroxisomal 8 110389829 110398133 - 30032202 116907905 MODEL JAAIVD010000027;XM_032911105 XP_032766996 protein-coding 625985174 Sh3tc2 SH3 domain and tetratricopeptide repeats 2 INVOLVED IN myelination in peripheral nervous system (ortholog); peripheral nervous system myelin maintenance (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog); recycling endosome (ortholog) 15 69927502 69995839 - 22301074;30032202 116884807 MODEL JAAIVD010000010;XM_032886039 XP_032741930 SH3 domain and tetratricopeptide repeat-containing protein 2 protein-coding 625985195 Rnf19a ring finger protein 19A, RBR E3 ubiquitin protein ligase INVOLVED IN regulation of protein catabolic process at postsynapse, modulating synaptic transmission (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 209774012 209813212 - 22301074;30032202 116910579 MODEL JAAIVD010000025;XM_032914505;XM_032914512 XP_032770396;XP_032770403 E3 ubiquitin-protein ligase RNF19A protein-coding 625985213 LOC116908366 small nucleolar RNA SNORA1 8 11110202 11110334 + 116908366 MODEL JAAIVD010000027;XR_004388916 snorna 625985216 LOC116913167 coronin-1B-like 12 50453389 50459284 - 116913167 MODEL JAAIVD010000007 pseudo 625985217 Ttr transthyretin ENCODES a protein that exhibits hormone binding (ortholog); identical protein binding (ortholog); molecular sequestering activity (ortholog); INVOLVED IN negative regulation of glomerular filtration (ortholog); phototransduction, visible light (ortholog); retinoid metabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; retinoic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenosquamous lung carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) 15 22999646 23006885 - 2574113;30032202 116884620 MODEL JAAIVD010000010;X17389;XM_032885761 XP_032741652 protein-coding 625985225 LOC116911397 40S ribosomal protein S27-like 10 34450884 34451135 + 22301074;30032202 116911397 MODEL JAAIVD010000005;XM_032915357 XP_032771248 protein-coding 625985228 LOC116890573 small nucleolar RNA SNORA17 1 21208687 21208814 - 116890573 MODEL JAAIVD010000025;XR_004386739 snorna 625985231 Pi4ka phosphatidylinositol 4-kinase alpha ENCODES a protein that exhibits 1-phosphatidylinositol 4-kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); host-mediated perturbation of viral process (ortholog); myelination in peripheral nervous system (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Gastrointestinal Defects and Immunodeficiency Syndrome 2 (ortholog); genetic disease (ortholog); hereditary spastic paraplegia 84 (ortholog); FOUND IN cytoplasm (ortholog); Golgi-associated vesicle membrane (ortholog); plasma membrane (ortholog) 4 2550135 2662882 - 30032202 116898635 MODEL JAAIVD010000003;XM_032899855 XP_032755746 protein-coding 625985290 Ostc oligosaccharyltransferase complex non-catalytic subunit ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN obsolete co-translational protein modification (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog) 3 28155559 28171611 + 30032202 116896246 MODEL JAAIVD010000012;XM_032897315 XP_032753206 oligosaccharyltransferase complex subunit OSTC protein-coding 625985298 LOC116894008 olfactory receptor 51L1-like 2 101683061 101684014 - 22301074 116894008 MODEL JAAIVD010000001;XM_032895724 XP_032751615 protein-coding 625985301 Becn1 beclin 1 ENCODES a protein that exhibits GTPase binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); autophagosome assembly (ortholog); autophagosome maturation (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog) 9 60592779 60608052 - 30032202 116910572 MODEL JAAIVD010000002;XM_032914491;XM_032914492;XM_032914493;XM_032914495;XM_032914496 XP_032770382;XP_032770383;XP_032770384;XP_032770386;XP_032770387 beclin-1 protein-coding 625985328 LOC116903905 anionic trypsin-2-like 6 98598511 98601750 - 116903905 MODEL JAAIVD010000024 pseudo 625985329 Fcrlb Fc receptor like B INVOLVED IN negative regulation of immune response (ortholog); FOUND IN cytoplasm (ortholog) 10 50098454 50105095 - 30032202 116911722 MODEL JAAIVD010000005;XM_032915695 XP_032771586 Fc receptor-like B protein-coding 625985338 LOC116900382 olfactory receptor 5D14-like 5 69621260 69622204 - 22301074;30032202 116900382 MODEL JAAIVD010000023;XM_032902130 XP_032758021 protein-coding 625985341 LOC116893309 zinc finger protein 239-like 2 151785927 151787101 + 30032202 116893309 MODEL JAAIVD010000001;XM_032895136 XP_032751027 protein-coding 625985346 LOC116895622 UDP-glucuronosyltransferase 3A2-like 3 171323895 171327709 - 116895622 MODEL JAAIVD010000012 pseudo 625985347 LOC116894908 U7 small nuclear RNA 2 220674536 220674599 - 116894908 MODEL JAAIVD010000001;XR_004387110 snrna 625985350 LOC116898737 elongation factor 1-alpha 1-like 4 13094945 13096463 - 116898737 MODEL JAAIVD010000003 pseudo 625985351 Acvr2b activin A receptor type 2B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type II (ortholog); growth factor binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Anthracycline-induced Cardiotoxicity (ortholog); Brain Hypoxia-Ischemia (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 8 110635325 110665446 + 22301074;30032202 116907915 MODEL JAAIVD010000027;XM_032911115;XM_032911116;XM_032911117 XP_032767006;XP_032767007;XP_032767008 activin receptor type-2B protein-coding 625985372 Znf316 zinc finger protein 316 16 9876931 9893871 + 30032202 116885139 MODEL JAAIVD010000004;XM_032886322;XM_032886323;XM_032886324 XP_032742213;XP_032742214;XP_032742215 protein-coding 625985389 LOC116885252 uncharacterized LOC116885252 16 43148454 43159534 + 116885252 MODEL JAAIVD010000004;XR_004385999 ncrna 625985393 Cep19 centrosomal protein 19 INVOLVED IN cilium assembly (ortholog); microtubule anchoring at centrosome (ortholog); vesicle targeting, trans-Golgi to periciliary membrane compartment (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Morbid Obesity and Spermatogenic Failure (ortholog); optic atrophy (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 16931062 16936737 + 30032202 116898765 MODEL JAAIVD010000003;XM_032900097;XM_032900098 XP_032755988;XP_032755989 centrosomal protein of 19 kDa protein-coding 625985402 Arl16 ARF like GTPase 16 ASSOCIATED WITH Childhood Schizophrenia (ortholog); FOUND IN cytoplasm (ortholog) 9 63558503 63560732 + 22301074 116908608 MODEL JAAIVD010000002;XM_032911833 XP_032767724 ADP ribosylation factor like GTPase 16;ADP-ribosylation factor-like protein 16 protein-coding 625985411 LOC116885815 olfactory receptor 13C7-like 1 2727983 2730786 + 22301074 116885815 MODEL JAAIVD010000025;XM_032887159;XM_032887166;XM_032887171 XP_032743050;XP_032743057;XP_032743062 protein-coding 625985420 LOC116905901 uncharacterized LOC116905901 7 14347868 14351045 - 116905901 MODEL JAAIVD010000026;XR_004388575 ncrna 625985425 LOC116894612 vomeronasal type-2 receptor 116-like 2 185059545 185073015 + 116894612 MODEL JAAIVD010000001 pseudo 625985426 LOC116903305 C-type lectin domain family 4 member A-like 6 24162095 24175064 - 116903305 MODEL JAAIVD010000024;XM_032905731 XP_032761622 protein-coding 625985436 LOC116892370 uncharacterized LOC116892370 2 167115880 167120263 + 116892370 MODEL JAAIVD010000001;XR_004386949 ncrna 625985441 LOC116915166 U6 spliceosomal RNA 13 15228680 15228786 + 116915166 MODEL JAAIVD010000008;XR_004389828 snrna 625985444 LOC116889423 U6 spliceosomal RNA X 77842035 77842139 + 116889423 MODEL JAAIVD010000014;XR_004386388 snrna 625985447 LOC116888598 60S ribosomal protein L28-like X 129230428 129230913 + 116888598 MODEL JAAIVD010000014 pseudo 625985448 Ttc7a tetratricopeptide repeat domain 7A INVOLVED IN hemopoiesis (ortholog); intracellular iron ion homeostasis (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); Gastrointestinal defects and immunodeficiency syndrome (ortholog); genetic disease (ortholog) 7 5591532 5697649 - 22301074;30032202 116905749 MODEL JAAIVD010000026;XM_032908718 XP_032764609 tetratricopeptide repeat protein 7A protein-coding 625985472 Atxn7l3 ataxin 7 like 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN DUBm complex (ortholog); nucleus (ortholog); SAGA complex (ortholog) 9 61582097 61589701 - 30032202 116908615 MODEL JAAIVD010000002;XM_032911847;XM_032911848;XM_032911849;XM_032911850;XM_032911851 XP_032767738;XP_032767739;XP_032767740;XP_032767741;XP_032767742 ataxin-7-like protein 3 protein-coding 625985503 LOC116886931 uncharacterized LOC116886931 1 29323522 29324587 + 116886931 MODEL JAAIVD010000025;XR_004386195 ncrna 625985507 LOC116889908 olfactory receptor 6C74-like 1 160281656 160282603 - 22301074;30032202 116889908 MODEL JAAIVD010000025;XM_032890728 XP_032746619 protein-coding 625985511 Pdlim7 PDZ and LIM domain 7 INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of osteoblast differentiation (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytoplasm (ortholog) 14 73814419 73829333 - 30032202 116883688 MODEL JAAIVD010000009;XM_032884899;XM_032884900;XM_032884901;XM_032884902;XM_032884903 XP_032740790;XP_032740791;XP_032740792;XP_032740793;XP_032740794 PDZ and LIM domain protein 7 protein-coding 625985541 Phf20l1 PHD finger protein 20 like 1 ENCODES a protein that exhibits methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein catabolic process (ortholog) 1 240692540 240758909 + 22301074;30032202 116912213 MODEL JAAIVD010000025;XM_032916164;XM_032916174;XM_032916182;XM_032916190;XM_032916201;XM_032916210;XM_032916219;XM_032916226;XM_032916234;XM_032916240;XM_032916247;XM_032916258;XR_004389438 XP_032772055;XP_032772065;XP_032772073;XP_032772081;XP_032772092;XP_032772101;XP_032772110;XP_032772117;XP_032772125;XP_032772131;XP_032772138;XP_032772149 PHD finger protein 20-like protein 1 protein-coding 625985590 LOC116895259 annexin A7-like 3 1387374 1389337 - 116895259 MODEL JAAIVD010000012 pseudo 625985591 LOC116911953 activator of 90 kDa heat shock protein ATPase homolog 2 11 93431324 93440494 + 22301074;30032202 116911953 MODEL JAAIVD010000006;XM_032915875 XP_032771766 protein-coding 625985604 Srpx sushi repeat containing protein X-linked INVOLVED IN autophagy (ortholog); negative regulation of cell proliferation involved in contact inhibition (ortholog); phagolysosome assembly (ortholog); ASSOCIATED WITH Dwarfism (ortholog); hepatocellular carcinoma (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog) X 11179126 11253794 + 116889247 MODEL JAAIVD010000014;XM_032890401 XP_032746292 sushi repeat-containing protein SRPX protein-coding 625985618 Nfia nuclear factor I A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cartilage development (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Macrocephaly (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 56379747 56715274 - 22301074;30032202 116900055 MODEL JAAIVD010000025;XM_032901851;XM_032901855 XP_032757742;XP_032757746 nuclear factor 1 A-type protein-coding 625985637 Rgs9 regulator of G protein signaling 9 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN dark adaptation (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); light adaption (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 1 (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN glutamatergic synapse (ortholog); photoreceptor inner segment (ortholog); postsynaptic density membrane (ortholog) 9 69841032 69913802 + 22301074;30032202 116909171 MODEL JAAIVD010000002;XM_032912662 XP_032768553 regulator of G-protein signaling 9 protein-coding 625985660 LOC116905234 disintegrin and metalloproteinase domain-containing protein 21-like 7 95592415 95595341 - 22301074;30032202 116905234 MODEL JAAIVD010000026;XM_032908059 XP_032763950 protein-coding 625985665 Mta2 metastasis associated 1 family member 2 ENCODES a protein that exhibits histone deacetylase activity (ortholog); histone deacetylase binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); genomic imprinting (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH endometriosis (ortholog); systemic lupus erythematosus (ortholog); FOUND IN chromosome, telomeric region (ortholog); histone deacetylase complex (ortholog); nucleoplasm (ortholog) 2 8991900 9001270 - 22301074;30032202 116890913 MODEL JAAIVD010000001;XM_032891541 XP_032747432 metastasis-associated protein MTA2 protein-coding 625985687 LOC116902498 U6 spliceosomal RNA 5 144458196 144458293 - 116902498 MODEL JAAIVD010000023 pseudo 625985688 LOC116904475 proteasome activator complex subunit 2-like 6 138451041 138451780 - 116904475 MODEL JAAIVD010000024 pseudo 625985689 LOC116904688 small Cajal body-specific RNA 16 6 44630383 44630561 - 116904688 MODEL JAAIVD010000024;XR_004388384 ncrna 625985692 LOC116908249 proline-rich protein 23A3-like 8 90260863 90261585 + 116908249 MODEL JAAIVD010000027;XM_032911505 XP_032767396 protein-coding 625985696 Pxylp1 2-phosphoxylose phosphatase 1 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); positive regulation of heparan sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 8 88277526 88342118 - 30032202 116907082 MODEL JAAIVD010000027;XM_032910037;XM_032910038 XP_032765928;XP_032765929 protein-coding 625985709 LOC116897199 riboflavin kinase 3 185656928 185657998 - 22301074;30032202 116897199 MODEL JAAIVD010000012;XM_032898903 XP_032754794 protein-coding 625985714 LOC116887785 small nucleolar RNA SNORA9 18 40025327 40025459 - 116887785 MODEL JAAIVD010000013;XR_004386282 snorna 625985717 Chd1 chromodomain helicase DNA binding protein 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); host-mediated activation of viral transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Colorectal Neoplasms (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN cytoplasm (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) 14 242799 309547 - 22301074;30032202 116883994 MODEL JAAIVD010000009;XM_032885230 XP_032741121 chromodomain-helicase-DNA-binding protein 1 protein-coding 625985757 LOC116902632 U6atac minor spliceosomal RNA 5 9127146 9127271 + 116902632 MODEL JAAIVD010000023;XR_004388209 snrna 625985760 LOC116903706 uncharacterized LOC116903706 6 76619074 76638534 + 116903706 MODEL JAAIVD010000024;XR_004388292 ncrna 625985766 Dynll2 dynein light chain LC8-type 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); cytoplasmic dynein complex (ortholog) 9 82826911 82834700 + 22301074;30032202 116909139 MODEL JAAIVD010000002;XM_032912626 XP_032768517 dynein light chain 2, cytoplasmic protein-coding 625985773 LOC116895927 heat shock cognate 71 kDa protein-like 3 124919874 124921142 - 116895927 MODEL JAAIVD010000012 pseudo 625985774 LOC116894254 vomeronasal type-2 receptor 116-like 2 115278141 115327172 - 22301074;30032202 116894254 MODEL JAAIVD010000001;XM_032895960 XP_032751851 protein-coding 625985783 Cnnm4 cyclin and CBS domain divalent metal cation transport mediator 4 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN enamel mineralization (ortholog); intracellular monoatomic cation homeostasis (ortholog); magnesium ion homeostasis (ortholog); ASSOCIATED WITH Amaurosis Hypertrichosis (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 4 112691364 112731325 + 30032202 116899291 MODEL JAAIVD010000003;XM_032900933 XP_032756824 metal transporter CNNM4 protein-coding 625985794 Lhx9 LIM homeobox 9 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell population proliferation (ortholog); female gonad development (ortholog); gonad morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Pituitary Stalk Interruption Syndrome (ortholog) 10 19176028 19196221 - 22301074;30032202 116911592 MODEL JAAIVD010000005;XM_032915568;XM_032915569;XM_032915570;XM_032915571;XM_032915572 XP_032771459;XP_032771460;XP_032771461;XP_032771462;XP_032771463 LIM/homeobox protein Lhx9 protein-coding 625985816 LOC116894061 olfactory receptor 51H1-like 2 102842211 102843167 + 22301074 116894061 MODEL JAAIVD010000001;XM_032895784 XP_032751675 protein-coding 625985819 Pes1 pescadillo ribosomal biogenesis factor 1 INVOLVED IN cell population proliferation (ortholog); maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); cytosol (ortholog) 11 72966252 72982611 + 22301074;30032202 116912466 MODEL JAAIVD010000006;XM_032916532 XP_032772423 pescadillo homolog protein-coding 625985837 G2e3 G2/M-phase specific E3 ubiquitin protein ligase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN blastocyst development (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); protein polyubiquitination (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 7 64778843 64809916 + 22301074;30032202 116905029 MODEL JAAIVD010000026;XM_032907708;XM_032907709 XP_032763599;XP_032763600 G2/M phase-specific E3 ubiquitin-protein ligase protein-coding 625985858 Lmo4 LIM domain only 4 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN motor neuron axon guidance (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; ASSOCIATED WITH anencephaly (ortholog); FOUND IN cell leading edge (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 16537758 16555078 + 116896190 MODEL JAAIVD010000012;XM_032897236;XM_032897237 XP_032753127;XP_032753128 LIM domain transcription factor LMO4 protein-coding 625985870 Slc9a9 solute carrier family 9 member A9 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); phagosome maturation (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); colorectal cancer (ortholog); FOUND IN early endosome (ortholog); early phagosome (ortholog); phagocytic vesicle membrane (ortholog) 8 86176277 86711394 + 22301074;30032202 116906986 MODEL JAAIVD010000027;XM_032909913 XP_032765804 sodium/hydrogen exchanger 9 protein-coding 625985890 Kat2a lysine acetyltransferase 2A ENCODES a protein that exhibits acetyltransferase activity (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); cellular response to nerve growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN histone modification pathway; p53 signaling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH hepatitis B (ortholog); lung non-small cell carcinoma (ortholog); neural tube defect (ortholog); FOUND IN ATAC complex (ortholog); centrosome (ortholog); chromatin (ortholog) 9 59996879 60004898 - 22301074;30032202 116909484 MODEL JAAIVD010000002;XM_032913080;XM_032913081 XP_032768971;XP_032768972 histone acetyltransferase KAT2A protein-coding 625985916 LOC116907203 phospholipid scramblase 1 8 83947606 83960802 + 22301074;30032202 116907203 MODEL JAAIVD010000027;XM_032910161;XM_032910162 XP_032766052;XP_032766053 protein-coding 625985928 LOC116894728 cytochrome P450 2B12-like 2 42611141 42622764 + 116894728 MODEL JAAIVD010000001 pseudo 625985929 Gngt2 G protein subunit gamma transducin 2 ENCODES a protein that exhibits GTPase activity (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN heterotrimeric G-protein complex (ortholog) 9 58548012 58551423 - 22301074;30032202 116909460 MODEL JAAIVD010000002;XM_032913043;XM_032913044 XP_032768934;XP_032768935 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-T2 protein-coding 625985940 Fscb fibrous sheath CABYR binding protein ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN negative regulation of protein sumoylation (ortholog); FOUND IN sperm fibrous sheath (ortholog); sperm principal piece (ortholog) 7 77289804 77292188 + 30032202 116906108 MODEL JAAIVD010000026;XM_032909112 XP_032765003 fibrous sheath CABYR-binding protein protein-coding 625985943 Znf641 zinc finger protein 641 FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 271115087 271120675 - 30032202 116884695 MODEL JAAIVD010000025;XM_032885883;XM_032885891 XP_032741774;XP_032741782 protein-coding 625985956 LOC116891460 uncharacterized LOC116891460 2 74098714 74113707 + 116891460 MODEL JAAIVD010000001;XR_004386837 ncrna 625985961 LOC116910909 60S ribosomal protein L29-like 10 50260860 50278375 - 116910909 MODEL JAAIVD010000005 pseudo 625985962 LOC116900442 olfactory receptor 4C15-like 5 70851708 70852643 - 22301074 116900442 MODEL JAAIVD010000023;XM_032902182 XP_032758073 protein-coding 625985966 LOC116893139 alpha-enolase-like 2 88039737 88041213 + 116893139 MODEL JAAIVD010000001 pseudo 625985967 Zbed3 zinc finger BED-type containing 3 INVOLVED IN actin filament organization (ortholog); endoplasmic reticulum localization (ortholog); establishment of spindle localization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 3 200992324 201003791 - 30032202 116897280 MODEL JAAIVD010000012;XM_032899013 XP_032754904 zinc finger BED domain-containing protein 3 protein-coding 625985973 LOC116885095 U7 small nuclear RNA 15 10316892 10316954 + 116885095 MODEL JAAIVD010000010;XR_004385962 snrna 625985976 LOC116896954 uncharacterized LOC116896954 1 34392737 34436975 + 116896954 MODEL JAAIVD010000025;XR_004387384 ncrna 625985980 LOC116886847 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 18 30420403 30420799 + 116886847 MODEL JAAIVD010000013 pseudo 625985981 LOC116910454 serine protease 29-like 9 2588437 2590294 + 22301074 116910454 MODEL JAAIVD010000002;XM_032914320 XP_032770211 protein-coding 625985988 Ino80 INO80 complex ATPase subunit ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ATP-dependent activity, acting on DNA (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN cytosol (ortholog); Ino80 complex (ortholog); nuclear body (ortholog) 5 97555672 97652357 - 22301074;30032202 116901810 MODEL JAAIVD010000023;XM_032903970 XP_032759861 chromatin-remodeling ATPase INO80 protein-coding 625986028 LOC116895707 stathmin-like 3 213622594 213624045 - 116895707 MODEL JAAIVD010000012 pseudo 625986029 Gpr171 G protein-coupled receptor 171 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); neuropeptide binding (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of myeloid cell differentiation (ortholog); FOUND IN plasma membrane (ortholog) 3 95802042 95807064 + 22301074;30032202 116896842 MODEL JAAIVD010000012;XM_032898347 XP_032754238 probable G-protein coupled receptor 171 protein-coding 625986035 Mia2 MIA SH3 domain ER export factor 2 ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); lipoprotein transport (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 7 72386384 72475364 + 22301074;30032202 116905084 MODEL JAAIVD010000026;XM_032907792;XM_032907793;XM_032907794;XM_032907795;XM_032907796;XM_032907797;XM_032907798;XM_032907799;XM_032907800;XM_032907801 XP_032763683;XP_032763684;XP_032763685;XP_032763686;XP_032763687;XP_032763688;XP_032763689;XP_032763690;XP_032763691;XP_032763692 melanoma inhibitory activity protein 2 protein-coding 625986088 KEG97_t17 tRNA-His MT 11530 11597 + 64988255 trna 625986089 LOC116894970 small nucleolar RNA SNORA8 2 33230048 33230173 + 116894970 MODEL JAAIVD010000001;XR_004387162 snorna 625986092 Uxt ubiquitously expressed prefoldin like chaperone ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN centrosome cycle (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) X 2855746 2866185 - 22301074;30032202 116889400 MODEL JAAIVD010000014;XM_032890507 XP_032746398 protein UXT protein-coding 625986103 LOC116914313 enhancer of rudimentary homolog 13 40399810 40401711 + 116914313 MODEL JAAIVD010000008;XM_032918548 XP_032774439 protein-coding 625986108 LOC116888033 high mobility group protein B4-like X 84146618 84149726 - 116888033 MODEL JAAIVD010000014 pseudo 625986109 LOC116886572 uncharacterized LOC116886572 17 760621 774721 + 116886572 MODEL JAAIVD010000011;XR_004386117 ncrna 625986114 Smarcd1 SWI/SNF related BAF chromatin remodeling complex subunit D1 ENCODES a protein that exhibits chromatin binding (ortholog); molecular adaptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); chromatin remodeling (ortholog); nucleosome disassembly (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH alopecia (ortholog); Coffin-Siris syndrome 11 (ortholog); familial hyperlipidemia (ortholog); FOUND IN nBAF complex (ortholog); npBAF complex (ortholog); nucleoplasm (ortholog) 1 272502645 272513691 + 30032202 116885213 MODEL JAAIVD010000025;XM_032886448 XP_032742339 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 protein-coding 625986131 Prps1 phosphoribosyl pyrophosphate synthetase 1 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); ATP binding (ortholog); INVOLVED IN 5-phosphoribose 1-diphosphate biosynthetic process (ortholog); AMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN de novo purine biosynthetic pathway; ASSOCIATED WITH Arts syndrome (ortholog); Charcot-Marie-Tooth disease type X (ortholog); Charcot-Marie-Tooth disease X-linked recessive 5 (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) X 92870930 92893098 + 22301074;30032202 116888776 MODEL JAAIVD010000014;XM_032890061 XP_032745952 ribose-phosphate pyrophosphokinase 1 protein-coding 625986142 LOC116905639 inactive serine/threonine-protein kinase VRK3-like 7 26830417 26831748 - 116905639 MODEL JAAIVD010000026 pseudo 625986143 Pigv phosphatidylinositol glycan anchor biosynthesis class V ENCODES a protein that exhibits alpha-1,6-mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 24560953 24572628 + 22301074;30032202 116895045 MODEL JAAIVD010000025;XM_032896514;XM_032896515;XM_032896516 XP_032752405;XP_032752406;XP_032752407 GPI mannosyltransferase 2 protein-coding 625986159 LOC116908328 U6 spliceosomal RNA 8 64865947 64866053 + 116908328 MODEL JAAIVD010000027;XR_004388885 snrna 625986162 LOC116893140 cytochrome c oxidase subunit 7B, mitochondrial-like 2 88068262 88083727 + 116893140 MODEL JAAIVD010000001 pseudo 625986163 LOC116908630 E3 ubiquitin ligase Rnf157-like 9 67666853 67683847 + 116908630 MODEL JAAIVD010000002;XM_032911881 XP_032767772 protein-coding 625986169 LOC116886306 AFG3-like protein 1 17 43069474 43096131 + 22301074;30032202 116886306 MODEL JAAIVD010000011;XM_032887749 XP_032743640 protein-coding 625986190 LOC116897200 high mobility group protein B1-like 3 185663840 185665159 + 116897200 MODEL JAAIVD010000012;XR_004387401 pseudo 625986193 LOC116893684 glycine N-acyltransferase 2 12646132 12667273 + 22301074;30032202 116893684 MODEL JAAIVD010000001;XM_032895400 XP_032751291 protein-coding 625986203 LOC116903130 olfactory receptor 6C2-like 6 7852848 7853801 + 22301074;30032202 116903130 MODEL JAAIVD010000024;XM_032905485 XP_032761376 protein-coding 625986206 LOC116914135 small nucleolar RNA SNORA17 12 7148550 7148683 - 116914135 MODEL JAAIVD010000007;XR_004389696 snorna 625986209 LOC116896801 IQCJ-SCHIP1 readthrough transcript protein 3 86666249 87403861 - 30032202 116896801 MODEL JAAIVD010000012;XM_032898271;XM_032898272;XM_032898274 XP_032754162;XP_032754163;XP_032754165 schwannomin-interacting protein 1 protein-coding 625986232 LOC116889541 small nucleolar RNA SNORA76 X 23621062 23621187 - 116889541 MODEL JAAIVD010000014;XR_004386476 snorna 625986235 LOC116909824 uncharacterized LOC116909824 9 1200626 1202535 + 30032202 116909824 MODEL JAAIVD010000002;XM_032913540 XP_032769431 uncharacterized protein LOC116909824 protein-coding 625986243 LOC116899758 U6 spliceosomal RNA 4 121544059 121544161 - 116899758 MODEL JAAIVD010000003;XR_004387773 snrna 625986246 Padi1 peptidyl arginine deiminase 1 ENCODES a protein that exhibits calcium ion binding (ortholog); protein-arginine deiminase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 17297597 17329004 + 22301074;30032202 116893554 MODEL JAAIVD010000025;XM_032895271 XP_032751162 protein-arginine deiminase type-1 protein-coding 625986266 Zscan30 zinc finger and SCAN domain containing 30 15 19855995 19872493 + 30032202 116884661 MODEL JAAIVD010000010;XM_032885823;XM_032885824;XM_032885825;XM_032885826;XM_032885827;XM_032885828;XM_032885829;XM_032885830 XP_032741714;XP_032741715;XP_032741716;XP_032741717;XP_032741718;XP_032741719;XP_032741720;XP_032741721 zinc finger and SCAN domain-containing protein 30 protein-coding 625986296 LOC116894850 U6 spliceosomal RNA 2 55045842 55045948 - 116894850 MODEL JAAIVD010000001;XR_004387065 snrna 625986299 Cln6 CLN6 transmembrane ER protein ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); sulfatide binding (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); ganglioside metabolic process (ortholog); glycosaminoglycan metabolic process (ortholog); ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); Animal Disease Models (ortholog); Atrophy (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 8 57133262 57148014 + 116907297 MODEL JAAIVD010000027;XM_032910245 XP_032766136 ceroid-lipofuscinosis neuronal protein 6 protein-coding 625986310 LOC116895861 translation initiation factor IF-2-like 3 94633435 94636824 + 116895861 MODEL JAAIVD010000012;XM_032896964 XP_032752855 protein-coding 625986315 Cct7 chaperonin containing TCP1 subunit 7 ENCODES a protein that exhibits identical protein binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Disease Progression (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); microtubule (ortholog) 6 60733895 60750837 - 22301074;30032202 116903573 MODEL JAAIVD010000024;XM_032906191 XP_032762082 T-complex protein 1 subunit eta protein-coding 625986331 LOC116888192 60S ribosomal protein L21-like X 122281334 122281642 + 22301074;30032202 116888192 MODEL JAAIVD010000014;XM_032889502 XP_032745393 protein-coding 625986334 Arhgap22 Rho GTPase activating protein 22 INVOLVED IN regulation of postsynapse organization (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); pneumoconiosis (ortholog); FOUND IN glutamatergic synapse (ortholog) 13 8942664 9098859 + 22301074;30032202 116914821 MODEL JAAIVD010000008;XM_032919278 XP_032775169 rho GTPase-activating protein 22 protein-coding 625986349 LOC116911820 small nucleolar RNA SNORA48 10 42885143 42885279 + 116911820 MODEL JAAIVD010000005 pseudo 625986350 LOC116909172 40S ribosomal protein S2-like 9 35786893 35787776 + 116909172 MODEL JAAIVD010000002 pseudo 625986351 Ppargc1a PPARG coactivator 1 alpha ENCODES a protein that exhibits alpha-tubulin binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adipose tissue development (ortholog); autophagy of mitochondrion (ortholog); PARTICIPATES IN aldosterone signaling pathway; mTOR signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney failure (ortholog); age related macular degeneration (ortholog); FOUND IN apical dendrite (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 11 54020476 54669089 + 22301074;30032202 116912151 MODEL JAAIVD010000006;XM_032916065;XM_032916066;XM_032916067;XM_032916068;XM_032916069;XM_032916070 XP_032771956;XP_032771957;XP_032771958;XP_032771959;XP_032771960;XP_032771961 peroxisome proliferator-activated receptor gamma coactivator 1-alpha protein-coding 625986387 Dlgap5 DLG associated protein 5 ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 12 75628230 75659047 + 22301074;30032202 116913777 MODEL JAAIVD010000007;XM_032918083 XP_032773974 disks large-associated protein 5 protein-coding 625986410 Atp13a5 ATPase 13A5 4 14148835 14280875 - 22301074;30032202 116898741 MODEL JAAIVD010000003;XM_032900053 XP_032755944 probable cation-transporting ATPase 13A5 protein-coding 625986444 LOC116911836 small nucleolar RNA SNORA17 10 81440583 81440711 + 116911836 MODEL JAAIVD010000005;XR_004389370 snorna 625986447 LOC116910288 NACHT, LRR and PYD domains-containing protein 1b allele 4-like 9 44318339 44330273 + 22301074;30032202 116910288 MODEL JAAIVD010000002;XM_032914160 XP_032770051 protein-coding 625986454 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50260540 50260622 - 116911920 MODEL JAAIVD010000005 trna 625986455 Srsf5 serine and arginine rich splicing factor 5 ENCODES a protein that exhibits protein kinase B binding (ortholog); RNA binding (ortholog); RS domain binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); liver development (ortholog); liver regeneration (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH breast cancer (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 7 95166954 95171666 + 30032202 116905230 MODEL JAAIVD010000026;XM_032908045;XM_032908046;XM_032908047;XM_032908048;XM_032908049;XM_032908050;XR_004388501;XR_004388502;XR_004388503 XP_032763936;XP_032763937;XP_032763938;XP_032763939;XP_032763940;XP_032763941 serine/arginine-rich splicing factor 5 protein-coding 625986486 LOC116885644 ATP synthase F(0) complex subunit C1, mitochondrial-like 16 40136772 40137197 + 116885644 MODEL JAAIVD010000004 pseudo 625986487 Fam8a1 family with sequence similarity 8 member A1 FOUND IN Hrd1p ubiquitin ligase complex (ortholog) 14 65646782 65655925 + 116883855 MODEL JAAIVD010000009;XM_032885122;XM_032885123 XP_032741013;XP_032741014 protein FAM8A1 protein-coding 625986499 LOC116913795 olfactory receptor 4L1-like 12 73148571 73149500 + 22301074 116913795 MODEL JAAIVD010000007;XM_032918100 XP_032773991 protein-coding 625986502 LOC116892056 vomeronasal type-1 receptor 2-like 2 143754114 143755055 + 22301074;30032202 116892056 MODEL JAAIVD010000001;XM_032893525 XP_032749416 protein-coding 625986506 Unc93a unc-93 homolog A FOUND IN plasma membrane (ortholog) 2 186599754 186615962 + 116894619 MODEL JAAIVD010000001;XM_032896333 XP_032752224 protein unc-93 homolog A protein-coding 625986516 Ptgdr2 prostaglandin D2 receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); prostaglandin D receptor activity (ortholog); prostaglandin F receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); chemotaxis (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); COVID-19 (ortholog) 2 10420140 10421424 + 22301074;30032202 116893638 MODEL JAAIVD010000001;XM_032895352 XP_032751243 protein-coding 625986521 Rpl15 ribosomal protein L15 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 12 (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog) 12 87310156 87312279 - 22301074;30032202 116913998 MODEL JAAIVD010000007;XM_032918270 XP_032774161 60S ribosomal protein L15 protein-coding 625986529 LOC116885090 U6 spliceosomal RNA 15 73882323 73882409 - 116885090 MODEL JAAIVD010000010 pseudo 625986530 Pomc proopiomelanocortin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); hormone activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell-cell signaling (ortholog); cellular pigmentation (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; altered energy homeostasis pathway; altered melanocortin system pathway; ASSOCIATED WITH ACTH Syndrome, Ectopic (ortholog); acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 7 24626609 24629270 + 22301074 116905553 MODEL JAAIVD010000026;XM_032908584 XP_032764475 pro-opiomelanocortin protein-coding 625986536 LOC116895611 non-histone chromosomal protein HMG-17-like 3 169322558 169322827 - 116895611 MODEL JAAIVD010000012 pseudo 625986537 Shld1 shieldin complex subunit 1 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) 5 112383780 112454371 + 30032202 116902005 MODEL JAAIVD010000023;XM_032904270 XP_032760161 protein-coding 625986544 Shbg sex hormone binding globulin INVOLVED IN primary spermatocyte growth (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); diabetes mellitus (ortholog); dilated cardiomyopathy (ortholog) 9 49225821 49229053 - 30032202 116908722 MODEL JAAIVD010000002;XM_032912062 XP_032767953 sex hormone-binding globulin protein-coding 625986555 LOC116886750 small nucleolar RNA SNORD111 17 30546230 30546315 - 116886750 MODEL JAAIVD010000011;XR_004386153 snorna 625986558 LOC116897898 60S ribosomal protein L9-like 4 32986583 32987160 - 116897898 MODEL JAAIVD010000003 pseudo 625986559 Prmt7 protein arginine methyltransferase 7 ENCODES a protein that exhibits histone binding (ortholog); histone H4 methyltransferase activity (ortholog); histone H4R3 methyltransferase activity (ortholog); INVOLVED IN genomic imprinting (ortholog); peptidyl-arginine methylation (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); brachydactyly (ortholog); Dwarfism (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 17 25946272 25998828 + 22301074;30032202 116886206 MODEL JAAIVD010000011;XM_032887592 XP_032743483 protein arginine N-methyltransferase 7 protein-coding 625986581 Psmd13 proteasome 26S subunit, non-ATPase 13 INVOLVED IN meiosis I (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN proteasome accessory complex (ortholog); proteasome complex (ortholog); proteasome regulatory particle (ortholog) 2 8587111 8599719 - 30032202 116890897 MODEL JAAIVD010000001;XM_032891517 XP_032747408 26S proteasome non-ATPase regulatory subunit 13 protein-coding 625986598 LOC116890270 oogenesin-3-like 1 14624539 14630540 - 116890270 MODEL JAAIVD010000025 pseudo 625986599 LOC116888564 60S ribosomal protein L27-like X 14872475 14872865 - 116888564 MODEL JAAIVD010000014 pseudo 625986600 Depp1 DEPP autophagy regulator 1 INVOLVED IN regulation of autophagy (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 6 29955032 29957125 - 30032202 116903359 MODEL JAAIVD010000024;XM_032905833 XP_032761724 DEPP1 autophagy regulator;protein DEPP1 protein-coding 625986606 Elapor2 endosome-lysosome associated apoptosis and autophagy regulator family member 2 INVOLVED IN positive regulation of BMP signaling pathway (ortholog) 6 141094724 141276774 + 30032202 116904149 MODEL JAAIVD010000024;XM_032907046 XP_032762937 UPF0577 protein KIAA1324-like homolog protein-coding 625986631 LOC116893536 40S ribosomal protein S15a-like 2 201074082 201083294 + 116893536 MODEL JAAIVD010000001 pseudo 625986632 LOC116897334 tubulin alpha-1A chain-like 3 214745103 214746321 - 116897334 MODEL JAAIVD010000012 pseudo 625986633 LOC116906628 olfactory receptor 7E24-like 8 16300112 16301018 + 116906628 MODEL JAAIVD010000027 pseudo 625986634 Ap3m1 adaptor related protein complex 3 subunit mu 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN postsynaptic recycling endosome (ortholog) 12 90827400 90845718 - 22301074;30032202 116913632 MODEL JAAIVD010000007;XM_032917900;XM_032917901;XM_032917902 XP_032773791;XP_032773792;XP_032773793 AP-3 complex subunit mu-1 protein-coding 625986657 LOC116888862 constitutive coactivator of PPAR-gamma-like protein 2 X 26569743 26575798 - 30032202 116888862 MODEL JAAIVD010000014;XM_032890125 XP_032746016 protein-coding 625986663 LOC116900865 acyl-CoA-binding protein-like 5 65010488 65011304 + 116900865 MODEL JAAIVD010000023 pseudo 625986664 LOC116892961 mortality factor 4-like protein 1 2 212660849 212662789 + 22301074;30032202 116892961 MODEL JAAIVD010000001;XM_032894912 XP_032750803 protein-coding 625986670 LOC116894875 U6 spliceosomal RNA 2 156307887 156307993 - 116894875 MODEL JAAIVD010000001;XR_004387087 snrna 625986673 LOC116900260 olfactory receptor 1020-like 5 63183386 63184338 + 22301074;30032202 116900260 MODEL JAAIVD010000023;XM_032902011 XP_032757902 protein-coding 625986676 LOC116913029 U2 spliceosomal RNA 11 37264787 37264947 - 116913029 MODEL JAAIVD010000006 pseudo 625986677 LOC116895199 protein FAM136A-like 3 1294028 1316037 - 116895199 MODEL JAAIVD010000012 pseudo 625986678 Lkaaear1 LKAAEAR motif containing 1 5 158795923 158796782 - 116900804 MODEL JAAIVD010000023;XM_032902520 XP_032758411 protein LKAAEAR1 protein-coding 625986685 LOC116889746 glutaredoxin-1-like 116889746 MODEL JAAIVD010000077 pseudo 625986686 LOC116911162 PIN2/TERF1-interacting telomerase inhibitor 1-like 10 61793705 61794828 - 22301074;30032202 116911162 MODEL JAAIVD010000005;XM_032915023;XM_032915024 XP_032770914;XP_032770915 protein-coding 625986694 Dusp19 dual specificity phosphatase 19 ENCODES a protein that exhibits JUN kinase phosphatase activity (ortholog); MAP-kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); INVOLVED IN JNK cascade (ortholog); negative regulation of JNK cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FOUND IN cytoplasm (ortholog) 5 57796803 57809078 + 22301074;30032202 116901568 MODEL JAAIVD010000023;XM_032903565 XP_032759456 dual specificity protein phosphatase 19 protein-coding 625986702 LOC116908346 small nucleolar RNA SNORA62/SNORA6 family 8 111358311 111358459 + 116908346 MODEL JAAIVD010000027;XR_004388897 snorna 625986705 Rinl Ras and Rab interactor like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endocytosis (ortholog); FOUND IN actin cytoskeleton (ortholog); ruffle (ortholog) 2 167205899 167214336 - 30032202 116892375 MODEL JAAIVD010000001;XM_032894038 XP_032749929 ras and Rab interactor-like protein protein-coding 625986720 LOC116907125 uncharacterized LOC116907125 8 67260320 67262462 + 116907125 MODEL JAAIVD010000027;XR_004388808 ncrna 625986724 Ifnk interferon kappa ENCODES a protein that exhibits type I interferon receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); regulation of DNA-templated transcription (ortholog); response to virus (ortholog) 1 107663210 107665449 - 22301074;30032202 116902139 MODEL JAAIVD010000025;XM_032904470 XP_032760361 protein-coding 625986730 Rab39a RAB39A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); phagosome acidification (ortholog); phagosome-lysosome fusion (ortholog); FOUND IN autolysosome membrane (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 8 47676461 47694941 - 22301074;30032202 116907064 MODEL JAAIVD010000027;XM_032910019 XP_032765910 ras-related protein Rab-39A protein-coding 625986736 Sesn2 sestrin 2 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); L-leucine binding (ortholog); peroxidase activity (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); Hepatomegaly (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); cytoplasm (ortholog); lysosomal membrane (ortholog) 1 25726886 25744822 + 22301074;30032202 116895476 MODEL JAAIVD010000025;XM_032896738 XP_032752629 sestrin-2 protein-coding 625986750 Ccdc181 coiled-coil domain containing 181 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN manchette assembly (ortholog); sperm flagellum assembly (ortholog); spermatid development (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); manchette (ortholog) 10 43499174 43513250 + 30032202 116911066 MODEL JAAIVD010000005;XM_032914832 XP_032770723 coiled-coil domain-containing protein 181 protein-coding 625986760 LOC116895575 heterogeneous nuclear ribonucleoprotein K-like 3 136518471 136519672 + 116895575 MODEL JAAIVD010000012 pseudo 625986761 Zbtb4 zinc finger and BTB domain containing 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); methyl-CpNpG binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 49363778 49387286 + 22301074;30032202 116910143 MODEL JAAIVD010000002;XM_032913988;XM_032913989;XM_032913990;XM_032913991;XM_032913992 XP_032769879;XP_032769880;XP_032769881;XP_032769882;XP_032769883 zinc finger and BTB domain-containing protein 4 protein-coding 625986783 Ipmk inositol polyphosphate multikinase ENCODES a protein that exhibits 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); flavonoid binding (ortholog); inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); inositol trisphosphate metabolic process (ortholog); necroptotic process (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN ciliary basal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 15480061 15510854 - 22301074;30032202 116886882 MODEL JAAIVD010000013;XM_032888337;XM_032888338 XP_032744228;XP_032744229 protein-coding 625986797 Smim30 small integral membrane protein 30 INVOLVED IN negative regulation of type I interferon-mediated signaling pathway (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog) 6 124760080 124761453 - 116904071 MODEL JAAIVD010000024;XM_032906935 XP_032762826 protein-coding 625986803 LOC116887723 small nucleolar RNA SNORA17 18 25657994 25658127 - 116887723 MODEL JAAIVD010000013;XR_004386237 snorna 625986806 C4H2orf49 chromosome 4 C2orf49 homolog ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); tRNA-splicing ligase complex (ortholog) 4 119250078 119260833 + 22301074;30032202 116899341 MODEL JAAIVD010000003;XM_032901028 XP_032756919 ashwin protein-coding 625986814 LOC116895396 olfactory receptor 5V1-like 3 59935559 59936521 + 22301074 116895396 MODEL JAAIVD010000012;XM_032896684 XP_032752575 protein-coding 625986817 Susd2 sushi domain containing 2 INVOLVED IN negative regulation of cell cycle G1/S phase transition (ortholog); negative regulation of cell division (ortholog); FOUND IN plasma membrane (ortholog) 18 11804661 11812011 + 30032202 116887638 MODEL JAAIVD010000013;XM_032889233 XP_032745124 sushi domain-containing protein 2 protein-coding 625986835 LOC116894384 metallothionein-2-like 1 72708040 72710705 + 116894384 MODEL JAAIVD010000025 pseudo 625986836 LOC116887293 elongin-C-like 18 23802342 23802681 + 116887293 MODEL JAAIVD010000013 pseudo 625986837 LOC116890615 small nucleolar RNA SNORD121A 1 4349840 4349920 + 116890615 MODEL JAAIVD010000025;XR_004386765 snorna 625986840 Jkamp JNK1/MAPK8 associated membrane protein ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog) 7 85761623 85776111 + 22301074;30032202 116905151 MODEL JAAIVD010000026;XM_032907921 XP_032763812 JNK1/MAPK8-associated membrane protein protein-coding 625986851 Klhl14 kelch like family member 14 FOUND IN actin cytoskeleton (ortholog); aggresome (ortholog); cytosol (ortholog) 15 22060412 22162133 + 22301074 116884774 MODEL JAAIVD010000010;XM_032886002 XP_032741893 kelch-like protein 14 protein-coding 625986862 Rbm38 RNA binding motif protein 38 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 5 144951251 144964008 - 22301074;30032202 116902280 MODEL JAAIVD010000023;XM_032904710;XM_032904711 XP_032760601;XP_032760602 RNA-binding protein 38 protein-coding 625986872 Slc6a20 solute carrier family 6 member 20 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); amino-acid betaine transmembrane transporter activity (ortholog); L-proline transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid transport (ortholog); amino-acid betaine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Glycinuria with or without Oxalate Urolithiasis (ortholog); iminoglycinuria (ortholog); intellectual disability (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 8 114715324 114751501 - 22301074;30032202 116908028 MODEL JAAIVD010000027;XM_032911293 XP_032767184 sodium- and chloride-dependent transporter XTRP3 protein-coding 625986885 Znf146 zinc finger protein 146 FOUND IN cytosol (ortholog); nucleolus (ortholog) 2 165845057 165851966 + 30032202 116892345 MODEL JAAIVD010000001;XM_032893987 XP_032749878 zinc finger protein OZF protein-coding 625986892 LOC116906364 small nucleolar RNA SNORD113/SNORD114 family 7 127209580 127209655 + 116906364 MODEL JAAIVD010000026 pseudo 625986893 Prpf4 pre-mRNA splicing tri-snRNP complex factor PRPF4 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa 70 (ortholog); substance-related disorder (ortholog); FOUND IN Cajal body (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 91111277 91119353 - 22301074;30032202 116901411 MODEL JAAIVD010000025;XM_032903296 XP_032759187 U4/U6 small nuclear ribonucleoprotein Prp4;pre-mRNA processing factor 4 protein-coding 625986905 Chst1 carbohydrate sulfotransferase 1 ENCODES a protein that exhibits keratan sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN galactose metabolic process (ortholog); keratan sulfate proteoglycan biosynthetic process (ortholog); keratan sulfate proteoglycan metabolic process (ortholog) 5 66768789 66783505 + 22301074;30032202 116901646 MODEL JAAIVD010000023;XM_032903751 XP_032759642 protein-coding 625986912 LOC116893248 peptidyl-prolyl cis-trans isomerase A-like 2 128089975 128147475 - 116893248 MODEL JAAIVD010000001 pseudo 625986913 Trim47 tripartite motif containing 47 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 9 67952672 67957171 + 22301074 116909987 MODEL JAAIVD010000002;XM_032913769 XP_032769660 E3 ubiquitin-protein ligase TRIM47 protein-coding 625986923 Crcp CGRP receptor component ENCODES a protein that exhibits calcitonin gene-related peptide receptor activity (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN neuropeptide signaling pathway (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH Hyperalgesia (ortholog); sciatic neuropathy (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); dendrite (ortholog) 16 23928276 23954553 - 22301074;30032202 116885920 MODEL JAAIVD010000004;XM_032887231 XP_032743122 DNA-directed RNA polymerase III subunit RPC9 protein-coding 625986932 Ccdc47 coiled-coil domain containing 47 ENCODES a protein that exhibits calcium ion binding (ortholog); protein folding chaperone (ortholog); ribosome binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); endoplasmic reticulum calcium ion homeostasis (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH Trichohepatoneurodevelopmental Syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog) 9 72902474 72920780 + 22301074;30032202 116909828 MODEL JAAIVD010000002;XM_032913545 XP_032769436 coiled-coil domain-containing protein 47 protein-coding 625986949 Mdk midkine ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); heparan sulfate binding (ortholog); heparin binding (ortholog); INVOLVED IN adrenal gland development (ortholog); behavioral fear response (ortholog); cell migration (ortholog); PARTICIPATES IN glypican signaling pathway; syndecan signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cell projection (ortholog) 5 66073847 66075886 - 22301074;30032202 116901633 MODEL JAAIVD010000023;XM_032903719 XP_032759610 protein-coding 625986958 LOC116899675 putative E3 ubiquitin-protein ligase UBR7 1 107873391 107878158 - 116899675 MODEL JAAIVD010000025 pseudo 625986959 Zc3hc1 zinc finger C3HC-type containing 1 ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Coronary Disease (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nuclear membrane (ortholog); nuclear pore nuclear basket (ortholog); nucleoplasm (ortholog) 6 109169666 109191403 + 22301074;30032202 116904003 MODEL JAAIVD010000024;XM_032906812 XP_032762703 nuclear-interacting partner of ALK protein-coding 625986973 Xab2 XPA binding protein 2 INVOLVED IN blastocyst development (ortholog); cerebral cortex development (ortholog); DNA-templated transcription (ortholog); PARTICIPATES IN nucleotide excision repair pathway; spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 1529055 1545995 - 22301074;30032202 116885369 MODEL JAAIVD010000004;XM_032886643 XP_032742534 pre-mRNA-splicing factor SYF1 protein-coding 625986996 LOC116912016 prostaglandin E synthase 3-like 11 67712435 67715808 + 116912016 MODEL JAAIVD010000006 pseudo 625986997 Hp1bp3 heterochromatin protein 1 binding protein 3 ENCODES a protein that exhibits DNA binding (ortholog); nucleosome binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); heterochromatin organization (ortholog); regulation of cell population proliferation (ortholog); FOUND IN chromosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 19974110 20001372 - 22301074;30032202 116893953 MODEL JAAIVD010000025;XM_032895674;XM_032895681;XM_032895687;XM_032895694;XM_032895698 XP_032751565;XP_032751572;XP_032751578;XP_032751585;XP_032751589 heterochromatin protein 1-binding protein 3 protein-coding 625987030 LOC116890237 uncharacterized LOC116890237 1 271204619 271223454 + 116890237 MODEL JAAIVD010000025;XR_004386531 ncrna 625987042 LOC116905619 high mobility group protein B3-like 7 38030260 38030832 - 116905619 MODEL JAAIVD010000026 pseudo 625987043 LOC116900770 ragulator complex protein LAMTOR5 5 153231314 153231734 + 22301074;30032202 116900770 MODEL JAAIVD010000023;XM_032902481 XP_032758372 protein-coding 625987048 Kmt2e lysine methyltransferase 2E (inactive) ENCODES a protein that exhibits enzyme binding (ortholog); histone H3 methyltransferase activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); erythrocyte differentiation (ortholog); neutrophil activation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nuclear body (ortholog) 6 152591853 152662667 + 22301074 116904190 MODEL JAAIVD010000024;XM_032907103 XP_032762994 inactive histone-lysine N-methyltransferase 2E protein-coding 625987079 LOC116896076 60S ribosomal protein L7a-like 3 213199107 213199574 + 116896076 MODEL JAAIVD010000012;XM_032897057 XP_032752948 protein-coding 625987082 LOC116900198 jupiter microtubule associated homolog 1-like 5 50232377 50232924 + 30032202 116900198 MODEL JAAIVD010000023;XM_032901958 XP_032757849 protein-coding 625987086 Cga glycoprotein hormones, alpha polypeptide ENCODES a protein that exhibits follicle-stimulating hormone activity (ortholog); hormone activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); developmental growth (ortholog); follicle-stimulating hormone secretion (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; luteinizing hormone signaling pathway; ASSOCIATED WITH adrenal gland disease (ortholog); atrial fibrillation (ortholog); breast cancer (ortholog); FOUND IN extracellular space (ortholog); follicle-stimulating hormone complex (ortholog); pituitary gonadotropin complex (ortholog) 1 107887790 107900325 - 22301074;30032202 116888868 MODEL JAAIVD010000025;XM_032890134 XP_032746025 glycoprotein hormones alpha chain protein-coding 625987094 LOC116893086 centromere protein T-like 2 54173833 54181672 - 116893086 MODEL JAAIVD010000001 pseudo 625987095 Kank2 KN motif and ankyrin repeat domains 2 INVOLVED IN kidney epithelium development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); nephrotic syndrome type 16 (ortholog); palmoplantar keratoderma and woolly hair (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 8 18036999 18062553 - 22301074;30032202 116907561 MODEL JAAIVD010000027;XM_032910584 XP_032766475 KN motif and ankyrin repeat domain-containing protein 2 protein-coding 625987110 Dnaaf10 dynein axonemal assembly factor 10 FOUND IN RPAP3/R2TP/prefoldin-like complex (ortholog) 11 85681103 85701476 + 30032202 116912479 MODEL JAAIVD010000006;XM_032916544 XP_032772435 Wdr92 WD repeat domain 92;WD repeat-containing protein 92 protein-coding 625987122 LOC116885294 inactive 2'-5' oligoadenylate synthetase 1C-like 16 32949448 32958001 - 116885294 MODEL JAAIVD010000004 pseudo 625987123 LOC116887910 40S ribosomal protein S19-like X 54462682 54463952 - 22301074;30032202 116887910 MODEL JAAIVD010000014;XM_032889383 XP_032745274 protein-coding 625987127 LOC116896897 prohibitin-like 3 106020884 106021702 - 116896897 MODEL JAAIVD010000012 pseudo 625987128 LOC116902685 ubiquitin-conjugating enzyme E2 Q2-like 6 38902444 38904047 + 22301074 116902685 MODEL JAAIVD010000024;XM_032905043 XP_032760934 protein-coding 625987133 Acta1 actin alpha 1, skeletal muscle INVOLVED IN cellular response to potassium ion (ortholog); response to mechanical stimulus (ortholog); response to steroid hormone (ortholog); ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); aortic dissection (ortholog); centronuclear myopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); sarcomere (ortholog) 17 43443686 43445663 - 30032202 116886395 MODEL JAAIVD010000011;XM_032887863;XM_032887864 XP_032743754;XP_032743755 actin, alpha skeletal muscle protein-coding 625987146 LOC116889167 phosphoglycerate mutase 1-like X 6053941 6054703 + 116889167 MODEL JAAIVD010000014 pseudo 625987147 Znf280d zinc finger protein 280D 8 66617838 66704181 + 30032202 116907956 MODEL JAAIVD010000027;XM_032911181;XM_032911182;XM_032911183;XM_032911184;XR_004388857 XP_032767072;XP_032767073;XP_032767074;XP_032767075 protein-coding 625987187 LOC116911984 deoxyuridine 5'-triphosphate nucleotidohydrolase-like 11 44677620 44678024 + 116911984 MODEL JAAIVD010000006;XM_032915895 XP_032771786 protein-coding 625987190 Eef1akmt1 EEF1A lysine methyltransferase 1 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog) 12 67264307 67281958 + 22301074;30032202 116913322 MODEL JAAIVD010000007;XM_032917467 XP_032773358 protein-coding 625987199 LOC116907739 zinc finger protein 14-like 1 157568325 157573172 - 116907739 MODEL JAAIVD010000025;XM_032910911 XP_032766802 protein-coding 625987204 LOC116912362 40S ribosomal protein S20-like 11 71165743 71166249 - 116912362 MODEL JAAIVD010000006;XR_004389449 pseudo 625987207 LOC116890759 RNA-binding protein 14 2 2849072 2877379 + 22301074;30032202 116890759 MODEL JAAIVD010000001;XM_032891216;XM_032891217;XM_032891218;XM_032891219;XM_032891220;XR_004386784 XP_032747107;XP_032747108;XP_032747109;XP_032747110;XP_032747111 RNA-binding protein 4;RNA-binding protein 4B protein-coding 625987235 Il1rap interleukin 1 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-1 receptor activity (ortholog); interleukin-1 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); head and neck squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); protein-containing complex (ortholog); synapse (ortholog) 4 13484316 13621037 - 22301074;30032202 116898738 MODEL JAAIVD010000003;XM_032900048;XM_032900049;XM_032900050;XR_004387656;XR_004387657;XR_004387658 XP_032755939;XP_032755940;XP_032755941 interleukin-1 receptor accessory protein protein-coding 625987268 LOC116895758 60S ribosomal protein L29-like 3 41411479 41411949 + 116895758 MODEL JAAIVD010000012;XM_032896922 XP_032752813 protein-coding 625987271 LOC116900284 olfactory receptor 8K5-like 5 63526573 63527499 - 22301074;30032202 116900284 MODEL JAAIVD010000023;XM_032902039 XP_032757930 protein-coding 625987274 Loxhd1 lipoxygenase homology PLAT domains 1 INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 77 (ortholog); FOUND IN stereocilium (ortholog) 15 54648489 54797914 - 22301074 116884542 MODEL JAAIVD010000010;XM_032885677;XM_032885679 XP_032741568;XP_032741570 lipoxygenase homology domain-containing protein 1;lipoxygenase homology domains 1 protein-coding 625987321 Saxo4 stabilizer of axonemal microtubules 4 ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 9945109 9953634 - 30032202 116893636 MODEL JAAIVD010000001;XM_032895349 XP_032751240 Ppp1r32 protein phosphatase 1 regulatory subunit 32 protein-coding 625987339 LOC116902775 eukaryotic translation initiation factor 4 gamma 1-like 6 75367887 75370421 - 116902775 MODEL JAAIVD010000024 pseudo 625987340 Pglyrp1 peptidoglycan recognition protein 1 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); molecular adaptor activity (ortholog); peptidoglycan binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); biological process involved in interaction with host (ortholog); defense response to Gram-positive bacterium (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN extracellular space (ortholog) 2 171732552 171738687 - 22301074;30032202 116892562 MODEL JAAIVD010000001;XM_032894340 XP_032750231 protein-coding 625987347 Zhx2 zinc fingers and homeoboxes 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); mRNA catabolic process (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 232021135 232167312 + 22301074;30032202 116911638 MODEL JAAIVD010000025;XM_032915599 XP_032771490 zinc fingers and homeoboxes protein 2 protein-coding 625987355 Rad54b RAD54 homolog B ENCODES a protein that exhibits DNA translocase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog) 1 131955417 132024055 - 22301074;30032202 116903384 MODEL JAAIVD010000025;XM_032905880 XP_032761771 DNA repair and recombination protein RAD54B protein-coding 625987373 LOC116907213 nucleophosmin-like 8 7243677 7244060 - 116907213 MODEL JAAIVD010000027 pseudo 625987374 LOC116903204 C-type lectin domain family 2 member D-related protein-like 6 18724703 18727832 - 30032202 116903204 MODEL JAAIVD010000024;XM_032905581 XP_032761472 protein-coding 625987382 Polr2h RNA polymerase II, I and III subunit H ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; FOUND IN nucleus (ortholog); protein-DNA complex (ortholog); RNA polymerase I complex (ortholog) 4 5538865 5544634 + 22301074;30032202 116898704 MODEL JAAIVD010000003;XM_032899978;XM_032899980;XM_032899981 XP_032755869;XP_032755871;XP_032755872 DNA-directed RNA polymerases I, II, and III subunit RPABC3;RNA polymerase II subunit H protein-coding 625987399 LOC116914974 zinc finger protein 844-like 13 20169975 20170890 - 116914974 MODEL JAAIVD010000008;XM_032919381 XP_032775272 protein-coding 625987403 LOC116895911 TD and POZ domain-containing protein 4-like 3 120750505 120751156 + 116895911 MODEL JAAIVD010000012 pseudo 625987404 Selenok selenoprotein K ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); establishment of localization in cell (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 5682088 5690362 + 30032202 116914749 MODEL JAAIVD010000008;XM_032919196;XM_032919197 XP_032775087;XP_032775088 protein-coding 625987415 LOC116897788 GTPase NRas-like 4 4392603 4393249 - 116897788 MODEL JAAIVD010000003 pseudo 625987416 LOC116904459 small integral membrane protein 1-like 6 131885525 131926915 - 116904459 MODEL JAAIVD010000024 pseudo 625987417 Slc26a11 solute carrier family 26 member 11 ENCODES a protein that exhibits chloride channel activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); monoatomic anion transmembrane transporter activity (ortholog); INVOLVED IN sulfate transmembrane transport (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endoplasmic reticulum (ortholog) 9 64653513 64675531 - 22301074;30032202 116908815 MODEL JAAIVD010000002;XM_032912222 XP_032768113 sodium-independent sulfate anion transporter protein-coding 625987437 LOC116914767 uncharacterized LOC116914767 13 19703674 19711196 + 116914767 MODEL JAAIVD010000008;XR_004389766 ncrna 625987441 LOC116914253 beta-defensin 13 13 64552354 64554160 - 22301074 116914253 MODEL JAAIVD010000008;XM_032918464 XP_032774355 protein-coding 625987446 Pdp1 pyruvate dehydrogenase phosphatase catalytic subunit 1 ENCODES a protein that exhibits [pyruvate dehydrogenase (acetyl-transferring)]-phosphatase activity (ortholog); calcium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); obesity (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) 1 131571299 131577884 + 22301074;30032202 116903340 MODEL JAAIVD010000025;XM_032905796;XM_032905805;XM_032905814;XM_032905823;XM_032905831 XP_032761687;XP_032761696;XP_032761705;XP_032761714;XP_032761722 pyruvate dehyrogenase phosphatase catalytic subunit 1 protein-coding 625987465 LOC116910896 T-complex protein 1 subunit zeta-like 10 42597164 42598809 - 116910896 MODEL JAAIVD010000005 pseudo 625987466 LOC116911672 intelectin-1a 10 50701450 50711191 - 30032202 116911672 MODEL JAAIVD010000005;XM_032915626 XP_032771517 protein-coding 625987477 Tlcd3a TLC domain containing 3A ASSOCIATED WITH Fraser syndrome 3 (ortholog); FOUND IN plasma membrane (ortholog) 9 94911919 94919618 + 22301074;30032202 116908651 MODEL JAAIVD010000002;XM_032911917;XM_032911918;XM_032911919;XM_032911920 XP_032767808;XP_032767809;XP_032767810;XP_032767811 TLC domain-containing protein 3A protein-coding 625987494 Adh7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); aldehyde oxidase activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); ethanol metabolic process (ortholog); fatty acid omega-oxidation (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); Laryngeal Neoplasms (ortholog); Mouth Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 3 20925853 20939030 - 22301074;30032202 116895233 MODEL JAAIVD010000012;XM_032896556 XP_032752447 all-trans-retinol dehydrogenase [NAD(+)] ADH7 protein-coding 625987506 Etnk1 ethanolamine kinase 1 ENCODES a protein that exhibits ethanolamine kinase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); teratoma (ortholog); FOUND IN cytoplasm (ortholog) 6 927464 969798 + 30032202 116903073 MODEL JAAIVD010000024;XM_032905390;XM_032905391;XM_032905392 XP_032761281;XP_032761282;XP_032761283 protein-coding 625987527 Arhgap40 Rho GTPase activating protein 40 5 137857935 137897125 + 22301074;30032202 116900735 MODEL JAAIVD010000023;XM_032902441 XP_032758332 rho GTPase-activating protein 40 protein-coding 625987545 Ccdc192 coiled-coil domain containing 192 15 74134479 74330409 - 116884726 MODEL JAAIVD010000010;XM_032885914 XP_032741805 coiled-coil domain-containing protein 192 protein-coding 625987555 LOC116907279 40S ribosomal protein SA-like 8 16627360 16630117 - 116907279 MODEL JAAIVD010000027 pseudo 625987556 Sowahb sosondowah ankyrin repeat domain family member B 11 5853789 5856476 - 22301074 116912539 MODEL JAAIVD010000006;XM_032916640 XP_032772531 ankyrin repeat domain-containing protein SOWAHB protein-coding 625987561 Gphb5 glycoprotein hormone subunit beta 5 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); regulation of thyroid hormone receptor signaling pathway (ortholog) 7 89578592 89581618 - 22301074;30032202 116904866 MODEL JAAIVD010000026;XM_032907457 XP_032763348 glycoprotein hormone beta-5 protein-coding 625987565 LOC116907708 olfactory receptor 958 8 82214730 82215668 + 22301074 116907708 MODEL JAAIVD010000027;XM_032910832 XP_032766723 protein-coding 625987568 LOC116883515 histone H2B type 1-F/J/L-like 14 41893853 41895557 - 22301074;30032202 116883515 MODEL JAAIVD010000009;XM_032884687 XP_032740578 protein-coding 625987574 LOC116907186 putative gustatory receptor clone PTE38 8 15867910 15868848 + 22301074;30032202 116907186 MODEL JAAIVD010000027;XM_032910147 XP_032766038 protein-coding 625987577 LOC116898443 exocrine gland-secreted peptide 1-like 4 95182673 95187084 + 22301074 116898443 MODEL JAAIVD010000003;XM_032899711 XP_032755602 protein-coding 625987581 Cplx1 complexin 1 ENCODES a protein that exhibits lipid binding (ortholog); SNARE binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN insulin secretion (ortholog); regulation of exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); ASSOCIATED WITH Ataxia (ortholog); bipolar disorder (ortholog); developmental and epileptic encephalopathy 63 (ortholog); FOUND IN calyx of Held (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 11 18300227 18330628 - 22301074;30032202 116912302 MODEL JAAIVD010000006;XM_032916312 XP_032772203 complexin-1 protein-coding 625987589 Znf593 zinc finger protein 593 ENCODES a protein that exhibits preribosome binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 1 23998529 24000837 + 22301074 116894811 MODEL JAAIVD010000025;XM_032896481 XP_032752372 protein-coding 625987596 LOC116913183 serine protease 52-like 12 60290427 60295711 - 22301074 116913183 MODEL JAAIVD010000007;XM_032917380 XP_032773271 protein-coding 625987604 LOC116912028 U1 small nuclear ribonucleoprotein C-like 11 75388169 75388651 + 116912028 MODEL JAAIVD010000006 pseudo 625987605 Tmem30b transmembrane protein 30B ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); INVOLVED IN aminophospholipid transport (ortholog); positive regulation of protein exit from endoplasmic reticulum (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) 7 87788069 87791184 - 30032202 116905163 MODEL JAAIVD010000026;XM_032907937 XP_032763828 cell cycle control protein 50B protein-coding 625987610 Golph3l golgi phosphoprotein 3 like ENCODES a protein that exhibits cargo adaptor activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN Golgi organization (ortholog); positive regulation of protein secretion (ortholog); protein targeting to Golgi apparatus (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 3 61651385 61683353 - 22301074;30032202 116896543 MODEL JAAIVD010000012;XM_032897732;XM_032897733 XP_032753623;XP_032753624 Golgi phosphoprotein 3-like protein-coding 625987622 LOC116897609 small nucleolar RNA SNORA17 3 87680132 87680252 + 116897609 MODEL JAAIVD010000012 pseudo 625987623 LOC116913885 eosinophil cationic protein-like 12 72040525 72040992 - 22301074;30032202 116913885 MODEL JAAIVD010000007;XM_032918173 XP_032774064 protein-coding 625987626 LOC116914589 neutrophil antibiotic peptide NP-1 13 64726041 64728366 - 22301074;30032202 116914589 MODEL JAAIVD010000008;XM_032918951 XP_032774842 protein-coding 625987633 LOC116893310 mas-related G-protein coupled receptor member B3-like 2 151873113 151873996 + 116893310 MODEL JAAIVD010000001 pseudo 625987634 Tmem151a transmembrane protein 151A ASSOCIATED WITH episodic kinesigenic dyskinesia 3 (ortholog); genetic disease (ortholog); polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 2 2566102 2570872 + 116890740 MODEL JAAIVD010000001;XM_032891197 XP_032747088 protein-coding 625987640 Gpr183 G protein-coupled receptor 183 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); oxysterol binding (ortholog); INVOLVED IN adaptive immune response (ortholog); cell chemotaxis (ortholog); dendritic cell chemotaxis (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); IgA glomerulonephritis (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 12 2939994 2942655 + 22301074;30032202 116914029 MODEL JAAIVD010000007;XM_032918296 XP_032774187 G-protein coupled receptor 183 protein-coding 625987645 LOC116899556 ATP-dependent DNA helicase DDX11-like 4 154677819 154684752 - 116899556 MODEL JAAIVD010000003;XM_032901453;XR_004387734;XR_004387735 XP_032757344 protein-coding 625987657 Grk1 G protein-coupled receptor kinase 1 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); INVOLVED IN negative regulation of neuron apoptotic process (ortholog); photoreceptor cell morphogenesis (ortholog); positive regulation of phosphorylation (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH congenital stationary night blindness (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); photoreceptor outer segment (ortholog) 13 70290418 70302633 - 22301074;30032202 116914772 MODEL JAAIVD010000008;XM_032919217 XP_032775108 rhodopsin kinase GRK1 protein-coding 625987668 LOC116891795 hemoglobin subunit beta-H1 2 101791410 101792966 + 22301074;30032202 116891795 MODEL JAAIVD010000001;XM_032893149 XP_032749040 protein-coding 625987675 LOC116907612 uncharacterized LOC116907612 1 165587045 165587881 + 116907612 MODEL JAAIVD010000025;XR_004388832 ncrna 625987679 Usp9x ubiquitin specific peptidase 9 X-linked ENCODES a protein that exhibits co-SMAD binding (ortholog); cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); INVOLVED IN axon extension (ortholog); BMP signaling pathway (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Developmental Disease (ortholog); epilepsy (ortholog); FOUND IN apical part of cell (ortholog); centrosome (ortholog); cilium (ortholog) X 8198472 8335190 - 22301074;30032202 116888385 MODEL JAAIVD010000014;XM_032889660 XP_032745551 probable ubiquitin carboxyl-terminal hydrolase FAF-X protein-coding 625987731 LOC116896551 eukaryotic translation elongation factor 1 epsilon-1-like 3 61766300 61767113 + 116896551 MODEL JAAIVD010000012 pseudo 625987732 LOC116898548 elongation factor 1-alpha 1-like 4 152592414 152594198 - 116898548 MODEL JAAIVD010000003 pseudo 625987733 Bcl2l15 BCL2 like 15 FOUND IN cytosol (ortholog); nucleus (ortholog) 3 54236663 54242068 - 22301074;30032202 116896441 MODEL JAAIVD010000012;XM_032897594 XP_032753485 bcl-2-like protein 15 protein-coding 625987741 Relch RAB11 binding and LisH domain, coiled-coil and HEAT repeat containing INVOLVED IN intracellular cholesterol transport (ortholog); FOUND IN recycling endosome (ortholog); trans-Golgi network (ortholog) 10 89971135 90065767 - 22301074;30032202 116911061 MODEL JAAIVD010000005;XM_032914821;XM_032914822;XM_032914823;XM_032914824;XM_032914825;XM_032914826;XM_032914827 XP_032770712;XP_032770713;XP_032770714;XP_032770715;XP_032770716;XP_032770717;XP_032770718 RAB11-binding protein RELCH protein-coding 625987788 Bcap31 B cell receptor associated protein 31 ENCODES a protein that exhibits MHC class I protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of ERAD pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH deafness, dystonia, and cerebral hypomyelination (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) X 128877665 128908141 + 30032202 116888323 MODEL JAAIVD010000014;XM_032889596 XP_032745487 B-cell receptor-associated protein 31 protein-coding 625987800 LOC116894234 ferritin light chain 1-like 2 111275866 111276467 - 22301074;30032202 116894234 MODEL JAAIVD010000001;XM_032895940 XP_032751831 protein-coding 625987805 Ccnh cyclin H ENCODES a protein that exhibits kinase activity (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN protein stabilization (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Neoplasms (ortholog); Capillary Malformation-Arteriovenous Malformation (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); male germ cell nucleus (ortholog) 3 210844063 210865228 - 22301074;30032202 116897319 MODEL JAAIVD010000012;XM_032899074 XP_032754965 cyclin-H protein-coding 625987818 Hinfp histone H4 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell cycle G1/S phase transition (ortholog); DNA damage checkpoint signaling (ortholog); DNA repair (ortholog); FOUND IN Cajal body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 8 38853792 38863405 - 30032202 116907090 MODEL JAAIVD010000027;XM_032910053 XP_032765944 protein-coding 625987832 LOC116908727 HAUS augmin-like complex subunit 4 9 9194648 9196954 + 116908727 MODEL JAAIVD010000002 pseudo 625987833 Ano7 anoctamin 7 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN calcium activated galactosylceramide scrambling (ortholog); calcium activated phosphatidylcholine scrambling (ortholog); calcium activated phosphatidylserine scrambling (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog); plasma membrane (ortholog) 4 165309843 165338825 + 22301074;30032202 116899664 MODEL JAAIVD010000003;XM_032901676 XP_032757567 anoctamin-7 protein-coding 625987861 LOC116894738 ribosome biogenesis protein NSA2 homolog 2 102274772 102278514 - 116894738 MODEL JAAIVD010000001 pseudo 625987862 LOC116893753 proteasome subunit beta type-6-like 2 26492624 26493299 + 116893753 MODEL JAAIVD010000001 pseudo 625987863 LOC116909316 prohibitin-like 9 23208547 23209407 - 116909316 MODEL JAAIVD010000002 pseudo 625987864 Wdr45 WD repeat domain 45 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); CEREBRAL-CEREBELLAR-COLOBOMA SYNDROME, X-LINKED (ortholog); Developmental Disabilities (ortholog); FOUND IN phagophore assembly site (ortholog) X 14402887 14407021 - 22301074;30032202 116888611 MODEL JAAIVD010000014;XM_032889910;XM_032889911 XP_032745801;XP_032745802 WD repeat domain phosphoinositide-interacting protein 4 protein-coding 625987882 LOC116886766 5S ribosomal RNA 17 43157135 43157257 - 116886766 MODEL JAAIVD010000011;XR_004386167 rrna 625987885 LOC116903456 60S ribosomal protein L13-like 6 43454384 43455008 - 116903456 MODEL JAAIVD010000024 pseudo 625987886 Tulp2 TUB like protein 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog) 2 153989672 154027070 - 30032202 116892146 MODEL JAAIVD010000001;XM_032893635;XM_032893636;XM_032893637 XP_032749526;XP_032749527;XP_032749528 tubby-related protein 2 protein-coding 625987908 Hnrnpm heterogeneous nuclear ribonucleoprotein M ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein antigen binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to carcinoembryonic antigen (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH colorectal carcinoma (ortholog); leiomyoma (ortholog); long QT syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) 1 158720911 158758766 + 30032202 116907063 MODEL JAAIVD010000025;XM_032910022;XM_032910028;XM_032910036;XM_032910045 XP_032765913;XP_032765919;XP_032765927;XP_032765936 protein-coding 625987940 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 1591773 1591855 - 116886805 MODEL JAAIVD010000011 trna 625987941 LOC116909364 60S ribosomal protein L30-like 9 87108237 87108837 + 116909364 MODEL JAAIVD010000002 pseudo 625987942 LOC116884882 mitochondrial thiamine pyrophosphate carrier-like 15 31737360 31746242 + 116884882 MODEL JAAIVD010000010 pseudo 625987943 Nphp3 nephrocystin 3 INVOLVED IN atrial septum development (ortholog); cilium assembly (ortholog); convergent extension involved in gastrulation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN ciliary base (ortholog); ciliary inversin compartment (ortholog); cilium (ortholog) 8 95318236 95359272 + 22301074;30032202 116907424 MODEL JAAIVD010000027;XM_032910391 XP_032766282 nephrocystin-3 protein-coding 625987974 Rhbg Rh family B glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); transepithelial ammonium transport (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 3 65309116 65320503 + 22301074;30032202 116896697 MODEL JAAIVD010000012;XM_032898097;XM_032898098;XM_032898099;XM_032898100;XM_032898101;XM_032898102 XP_032753988;XP_032753989;XP_032753990;XP_032753991;XP_032753992;XP_032753993 ammonium transporter Rh type B protein-coding 625988003 LOC116905064 ubiquitin-60S ribosomal protein L40-like 7 68913348 68914022 - 22301074;30032202 116905064 MODEL JAAIVD010000026;XM_032907767 XP_032763658 protein-coding 625988008 LOC116910675 small nucleolar RNA SNORA8 9 71767096 71767234 - 116910675 MODEL JAAIVD010000002;XR_004389207 snorna 625988011 Ppm1n protein phosphatase, Mg2+/Mn2+ dependent 1N (putative) 2 171336757 171341728 + 22301074;30032202 116892540 MODEL JAAIVD010000001;XM_032894301;XM_032894302 XP_032750192;XP_032750193 probable protein phosphatase 1N protein-coding 625988026 LOC116907878 40S ribosomal protein S16-like 8 109039674 109040158 - 116907878 MODEL JAAIVD010000027 pseudo 625988027 LOC116890257 pyruvate kinase PKM-like 1 263797236 263798873 + 116890257 MODEL JAAIVD010000025 pseudo 625988028 Hsd17b2 hydroxysteroid 17-beta dehydrogenase 2 ENCODES a protein that exhibits estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); testosterone dehydrogenase (NAD+) activity (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen metabolic process (ortholog); bone development (ortholog); PARTICIPATES IN estradiol biosynthetic pathway; testosterone biosynthetic pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 17 37357138 37423034 + 22301074 116886380 MODEL JAAIVD010000011;XM_032887846 XP_032743737 estradiol 17-beta-dehydrogenase 2 protein-coding 625988037 Gatc glutamyl-tRNA amidotransferase subunit C INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 42 (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) 16 38481590 38488417 + 22301074;30032202 116885968 MODEL JAAIVD010000004;XM_032887305 XP_032743196 glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial protein-coding 625988044 Cops9 COP9 signalosome subunit 9 INVOLVED IN cellular response to UV (ortholog); negative regulation of protein localization to nucleolus (ortholog); negative regulation of protein neddylation (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 4 164604658 164609494 - 30032202 116899647 MODEL JAAIVD010000003;XM_032901655 XP_032757546 COP9 signalosome complex subunit 9 protein-coding 625988051 LOC116911894 U6 spliceosomal RNA 10 50026889 50026994 - 116911894 MODEL JAAIVD010000005;XR_004389403 snrna 625988054 LOC116902502 U6 spliceosomal RNA 5 97464606 97464701 - 116902502 MODEL JAAIVD010000023 pseudo 625988055 Scrt1 scratch family transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nuclear body (ortholog); nucleus (ortholog) 1 248850500 248856367 - 30032202 116913238 MODEL JAAIVD010000025;XM_032917404 XP_032773295 transcriptional repressor scratch 1 protein-coding 625988061 Osm oncostatin M ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); oncostatin-M receptor binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); negative regulation of hormone secretion (ortholog); negative regulation of meiotic nuclear division (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-3 signaling pathway; ASSOCIATED WITH Chloracne (ortholog); contact dermatitis (ortholog); COVID-19 (ortholog) 11 73217087 73220379 + 22301074;30032202 116912657 MODEL JAAIVD010000006;XM_032916776 XP_032772667 oncostatin-M protein-coding 625988068 Stmn4 stathmin 4 12 58103938 58121357 - 22301074;30032202 116913426 MODEL JAAIVD010000007;XM_032917612;XM_032917613;XM_032917614;XM_032917615;XM_032917616;XM_032917618;XM_032917619 XP_032773503;XP_032773504;XP_032773505;XP_032773506;XP_032773507;XP_032773509;XP_032773510 stathmin-4 protein-coding 625988094 LOC116894429 keratin-associated protein 20-2-like 2 158874244 158874435 + 116894429 MODEL JAAIVD010000001;XM_032896134 XP_032752025 protein-coding 625988097 LOC116888669 WD repeat and SOCS box-containing protein 1-like 1 99381947 99383205 - 116888669 MODEL JAAIVD010000025 pseudo 625988098 LOC116897434 U6 spliceosomal RNA 3 120306031 120306131 - 116897434 MODEL JAAIVD010000012 pseudo 625988099 LOC116885081 U6 spliceosomal RNA 15 1952467 1952573 + 116885081 MODEL JAAIVD010000010;XR_004385954 snrna 625988102 LOC116908390 small nucleolar RNA SNORA17 8 91080667 91080798 - 116908390 MODEL JAAIVD010000027;XR_004388935 snorna 625988105 LOC116892039 non-histone chromosomal protein HMG-14-like 2 141894049 141894514 - 116892039 MODEL JAAIVD010000001 pseudo 625988106 LOC116912570 PRAME family member 12-like 11 48440515 48443164 + 22301074;30032202 116912570 MODEL JAAIVD010000006;XM_032916683;XM_032916685 XP_032772574;XP_032772576 PRAME family member 8-like protein-coding 625988112 LOC116890125 ubiquitin-conjugating enzyme E2 L3-like 1 243136660 243137330 - 116890125 MODEL JAAIVD010000025 pseudo 625988113 LOC116894941 small nucleolar RNA SNORD116 2 140059080 140059173 + 116894941 MODEL JAAIVD010000001;XR_004387139 snorna 625988116 Hycc2 hyccin PI4KA lipid kinase complex subunit 2 ASSOCIATED WITH Weight Gain (ortholog) 4 133809633 133877599 + 30032202 116899425 MODEL JAAIVD010000003;XM_032901168;XM_032901169;XM_032901170;XM_032901171 XP_032757059;XP_032757060;XP_032757061;XP_032757062 Fam126b family with sequence similarity 126 member B;protein FAM126B protein-coding 625988140 LOC116909302 olfactory receptor 1361-like 9 38253451 38254392 - 22301074;30032202 116909302 MODEL JAAIVD010000002;XM_032912842 XP_032768733 protein-coding 625988143 Gpr162 G protein-coupled receptor 162 6 23028375 23034518 + 22301074;30032202 116903271 MODEL JAAIVD010000024;XM_032905685;XM_032905686;XM_032905687 XP_032761576;XP_032761577;XP_032761578 probable G-protein coupled receptor 162 protein-coding 625988162 Gfm1 G elongation factor mitochondrial 1 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 1 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 3 87763018 87808795 - 22301074;30032202 116896804 MODEL JAAIVD010000012;XM_032898277 XP_032754168 elongation factor G, mitochondrial protein-coding 625988184 LOC116893173 olfactory receptor 52Z1-like 2 103305164 103309178 - 22301074 116893173 MODEL JAAIVD010000001;XM_032895081 XP_032750972 protein-coding 625988188 LOC116890329 U6 spliceosomal RNA 1 236789780 236789886 + 116890329 MODEL JAAIVD010000025;XR_004386552 snrna 625988191 Ndufa11 NADH:ubiquinone oxidoreductase subunit A11 ASSOCIATED WITH communication disorder (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 4 88092616 88096728 + 30032202 116899194 MODEL JAAIVD010000003;XM_032900779 XP_032756670 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11 protein-coding 625988199 Slu7 spliceosome associated SLU7 ENCODES a protein that exhibits pre-mRNA 3'-splice site binding (ortholog); second spliceosomal transesterification activity (ortholog); zinc ion binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to heat (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Weight Gain (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 26260004 26275261 + 30032202 116909525 MODEL JAAIVD010000002;XM_032913133 XP_032769024 SLU7 homolog, splicing factor;pre-mRNA-splicing factor SLU7 protein-coding 625988219 Plet1 placenta expressed transcript 1 INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); positive regulation of cell migration (ortholog); wound healing, spreading of epidermal cells (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog) 1 97602100 97604689 - 30032202 116885491 MODEL JAAIVD010000025;XM_032886786 XP_032742677 placenta-expressed transcript 1 protein protein-coding 625988223 LOC116895675 60S ribosomal protein L31-like 3 198049615 198049983 + 22301074;30032202 116895675 MODEL JAAIVD010000012;XM_032896879 XP_032752770 protein-coding 625988227 Grem1 gremlin 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); familial adenomatous polyposis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 5 91960512 91970084 - 30032202 116900589 MODEL JAAIVD010000023;XM_032902308 XP_032758199 gremlin-1 protein-coding 625988233 Med11 mediator complex subunit 11 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH NEURODEGENERATION WITH DEVELOPMENTAL DELAY, EARLY RESPIRATORY FAILURE, MYOCLONIC SEIZURES, AND BRAIN ABNORMALITIES (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 9 50062879 50064511 + 22301074;30032202 116910127 MODEL JAAIVD010000002;XM_032913962 XP_032769853 mediator of RNA polymerase II transcription subunit 11 protein-coding 625988240 Asic1 acid sensing ion channel subunit 1 ENCODES a protein that exhibits inorganic cation transmembrane transporter activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 1 272471845 272501267 + 22301074;30032202 116885185 MODEL JAAIVD010000025;XM_032886404;XM_032886411;XM_032886420;XM_032886429;XM_032886437 XP_032742295;XP_032742302;XP_032742311;XP_032742320;XP_032742328 acid-sensing ion channel 1 protein-coding 625988266 LOC116904050 potassium voltage-gated channel subfamily D member 2 6 117911987 117914818 - 22301074;30032202 116904050 MODEL JAAIVD010000024;XM_032906908 XP_032762799 protein-coding 625988271 LOC116891249 60S acidic ribosomal protein P2-like 2 45814327 45814734 - 116891249 MODEL JAAIVD010000001 pseudo 625988272 Mcat malonyl-CoA-acyl carrier protein transacylase ENCODES a protein that exhibits [acyl-carrier-protein] S-malonyltransferase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Optic Atrophy 15 (ortholog); FOUND IN mitochondrion (ortholog) 1 252964506 252974944 - 22301074 116914437 MODEL JAAIVD010000025;XM_032918740 XP_032774631 malonyl-CoA-acyl carrier protein transacylase, mitochondrial protein-coding 625988280 LOC116910508 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 9 69271319 69271706 - 116910508 MODEL JAAIVD010000002 pseudo 625988281 Arsj arylsulfatase family member J FOUND IN actin cytoskeleton (ortholog) 3 33031289 33102290 - 116895324 MODEL JAAIVD010000012;XM_032896633 XP_032752524 arylsulfatase J protein-coding 625988287 Rassf8 Ras association domain family member 8 ASSOCIATED WITH cholangiocarcinoma (ortholog); lung small cell carcinoma (ortholog) 6 3482738 3553620 + 22301074 116903082 MODEL JAAIVD010000024;XM_032905403 XP_032761294 ras association domain-containing protein 8 protein-coding 625988296 LOC116897557 small nucleolar RNA SNORA17 3 175611890 175612016 - 116897557 MODEL JAAIVD010000012;XR_004387570 snorna 625988299 LOC116890891 interferon-induced transmembrane protein 2 2 8525498 8526760 + 30032202 116890891 MODEL JAAIVD010000001;XM_032891506 XP_032747397 protein-coding 625988305 Rabif RAB interacting factor ENCODES a protein that exhibits zinc ion binding (ortholog) 10 1202732 1212759 - 22301074;30032202 116911340 MODEL JAAIVD010000005;XM_032915255 XP_032771146 guanine nucleotide exchange factor MSS4 protein-coding 625988311 Nek4 NIMA related kinase 4 ENCODES a protein that exhibits manganese ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic cell cycle (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH ciliopathy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary plasm (ortholog); ciliary rootlet (ortholog) 13 6654916 6692216 + 22301074;30032202 116914562 MODEL JAAIVD010000008;XM_032918916 XP_032774807 serine/threonine-protein kinase Nek4 protein-coding 625988330 LOC116894446 protein SET-like 2 164815926 164817105 + 22301074;30032202 116894446 MODEL JAAIVD010000001;XM_032896148 XP_032752039 protein-coding 625988335 LOC116899598 intestinal-type alkaline phosphatase 2 4 159259923 159262997 + 30032202 116899598 MODEL JAAIVD010000003;XM_032901543 XP_032757434 protein-coding 625988348 Mmp24 matrix metallopeptidase 24 ENCODES a protein that exhibits cadherin binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); detection of temperature stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN plasma membrane (ortholog); trans-Golgi network membrane (ortholog) 5 135115634 135172376 + 22301074;30032202 116901052 MODEL JAAIVD010000023;XM_032902633 XP_032758524 matrix metalloproteinase-24 protein-coding 625988363 Stt3b STT3 oligosaccharyltransferase complex catalytic subunit B ENCODES a protein that exhibits dolichyl-diphosphooligosaccharide-protein glycotransferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); obsolete co-translational protein modification (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ix (ortholog); FOUND IN endoplasmic reticulum (ortholog); oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex B (ortholog) 8 105848537 105915659 - 22301074;30032202 116907841 MODEL JAAIVD010000027;XM_032911029 XP_032766920 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B protein-coding 625988383 LOC116883945 40S ribosomal protein S28-like 14 70997360 70997580 - 22301074;30032202 116883945 MODEL JAAIVD010000009;XM_032885197 XP_032741088 protein-coding 625988388 Gucy1b1 guanylate cyclase 1 soluble subunit beta 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); cytidylate cyclase activity (ortholog); guanylate cyclase activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); nitric oxide-cGMP-mediated signaling (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Sporadic Creutzfeldt-Jakob Disease (ortholog); withdrawal disorder (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); guanylate cyclase complex, soluble (ortholog) 3 71488715 71531791 + 22301074;30032202 116896752 MODEL JAAIVD010000012;XM_032898195 XP_032754086 guanylate cyclase soluble subunit beta-1 protein-coding 625988406 Focad focadhesin ASSOCIATED WITH genetic disease (ortholog); liver cirrhosis (ortholog); Severe Congenital Liver Disease (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) 1 65716770 66012767 - 30032202 116900412 MODEL JAAIVD010000025;XM_032902159 XP_032758050 protein-coding 625988454 LOC116904700 small nucleolar RNA SNORA48 6 56854592 56854721 - 116904700 MODEL JAAIVD010000024 pseudo 625988455 LOC116903714 60S ribosomal protein L19 6 77583577 77584261 + 22301074;30032202 116903714 MODEL JAAIVD010000024;XM_032906388 XP_032762279 protein-coding 625988460 LOC116892058 heat shock protein HSP 90-beta-like 2 144837591 144839666 + 116892058 MODEL JAAIVD010000001 pseudo 625988461 Npy5r neuropeptide Y receptor Y5 ENCODES a protein that exhibits neuropeptide Y receptor activity (ortholog); pancreatic polypeptide receptor activity (ortholog); peptide YY receptor activity (ortholog); INVOLVED IN cardiac left ventricle morphogenesis (ortholog); chemical synaptic transmission (ortholog); eating behavior (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); Alcohol Withdrawal Seizures (ortholog); FOUND IN GABA-ergic synapse (ortholog); membrane (ortholog); neuron projection (ortholog) 13 22610548 22613064 + 22301074;30032202 116914886 MODEL JAAIVD010000008;XM_032919326 XP_032775217 neuropeptide Y receptor type 5 protein-coding 625988466 LOC116908083 40S ribosomal protein S3a-like 8 51372551 51373530 + 116908083 MODEL JAAIVD010000027 pseudo 625988467 LOC116886836 uncharacterized LOC116886836 1 24793925 24800679 - 116886836 MODEL JAAIVD010000025;XR_004386189 ncrna 625988472 Atg2a autophagy related 2A ENCODES a protein that exhibits lipid transfer activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN organelle membrane contact site (ortholog) 2 1427016 1446639 - 30032202 116890668 MODEL JAAIVD010000001;XM_032891074 XP_032746965 autophagy-related protein 2 homolog A protein-coding 625988516 LOC116895596 40S ribosomal protein S19-like 3 151366663 151367103 - 116895596 MODEL JAAIVD010000012 pseudo 625988517 Slamf6 SLAM family member 6 INVOLVED IN natural killer cell differentiation (ortholog); natural killer cell proliferation (ortholog); positive regulation of interleukin-17 production (ortholog); FOUND IN plasma membrane (ortholog) 10 51037428 51061307 + 30032202 116911294 MODEL JAAIVD010000005;XM_032915201 XP_032771092 protein-coding 625988529 LOC116896007 40S ribosomal protein S6-like 3 172923374 172928228 + 116896007 MODEL JAAIVD010000012 pseudo 625988530 LOC116905571 centrin-2-like 7 93572767 93582558 - 116905571 MODEL JAAIVD010000026 pseudo 625988531 Chrna5 cholinergic receptor nicotinic alpha 5 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to nicotine (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 8 49078552 49086792 + 22301074;30032202 116907003 MODEL JAAIVD010000027;XM_032909930;XM_032909931 XP_032765821;XP_032765822 neuronal acetylcholine receptor subunit alpha-5 protein-coding 625988544 Rab7a RAB7A, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); bone resorption (ortholog); early endosome to late endosome transport (ortholog); PARTICIPATES IN autophagy pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); Charcot-Marie-Tooth disease type 2B (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 58276096 58320896 + 22301074;30032202 116903529 MODEL JAAIVD010000024;X12535;XM_032906139 CAA31053;XP_032762030 ras-related protein Rab-7a protein-coding 625988554 LOC116889539 small nucleolar RNA SNORA26 X 113483317 113483437 + 116889539 MODEL JAAIVD010000014;XR_004386474 snorna 625988557 Nsmf NMDA receptor synaptonuclear signaling and neuronal migration factor ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to electrical stimulus (ortholog); cellular response to gonadotropin stimulus (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical dendrite (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) 5 12124239 12135558 - 30032202 116901324 MODEL JAAIVD010000023;XM_032903139;XM_032903140;XM_032903141;XM_032903142 XP_032759030;XP_032759031;XP_032759032;XP_032759033 protein-coding 625988582 Cfap43 cilia and flagella associated protein 43 INVOLVED IN brain development (ortholog); cell morphogenesis (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); normal pressure hydrocephalus (ortholog); oligospermia (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog) 2 47264857 47353455 - 22301074;30032202 116891272 MODEL JAAIVD010000001;XM_032892170 XP_032748061 cilia- and flagella-associated protein 43 protein-coding 625988624 LOC116897901 resistin-like beta 4 33342620 33344506 + 22301074;30032202 116897901 MODEL JAAIVD010000003;XM_032899305 XP_032755196 protein-coding 625988632 LOC116894524 vomeronasal type-1 receptor 4-like 2 175136981 175137901 - 22301074;30032202 116894524 MODEL JAAIVD010000001;XM_032896224 XP_032752115 protein-coding 625988635 Dapp1 dual adaptor of phosphotyrosine and 3-phosphoinositides 1 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN plasma membrane (ortholog) 3 21191472 21238818 + 116895303 MODEL JAAIVD010000012;XM_032896615 XP_032752506 dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide protein-coding 625988648 LOC116894241 vomeronasal type-2 receptor 116-like 2 114234984 114260321 - 22301074;30032202 116894241 MODEL JAAIVD010000001;XM_032895946 XP_032751837 protein-coding 625988656 Gpld1 glycosylphosphatidylinositol specific phospholipase D1 ENCODES a protein that exhibits glycosylphosphatidylinositol phospholipase D activity (ortholog); phospholipase D activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to cholesterol (ortholog); cellular response to insulin stimulus (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 14 43986187 44037832 + 22301074;30032202 116915210 MODEL JAAIVD010000009;XM_032919581;XM_032919582;XM_032919583;XM_032919584;XM_032919585;XM_032919586 XP_032775472;XP_032775473;XP_032775474;XP_032775475;XP_032775476;XP_032775477 phosphatidylinositol-glycan-specific phospholipase D protein-coding 625988705 LOC116906503 U2 spliceosomal RNA 7 2536424 2536613 + 116906503 MODEL JAAIVD010000026;XR_004388739 snrna 625988708 LOC116908144 inactive serine protease 45 8 101417374 101423091 + 22301074;30032202 116908144 MODEL JAAIVD010000027;XM_032911436 XP_032767327 protein-coding 625988717 Gfm2 GTP dependent ribosome recycling factor mitochondrial 2 ENCODES a protein that exhibits GTPase activity (ortholog); translation elongation factor activity (ortholog); INVOLVED IN mitochondrial translation (ortholog); mitochondrial translational elongation (ortholog); ribosome disassembly (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 39 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 3 199447019 199483030 - 22301074;30032202 116897268 MODEL JAAIVD010000012;XM_032899000 XP_032754891 ribosome-releasing factor 2, mitochondrial protein-coding 625988742 Aldob aldolase, fructose-bisphosphate B ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal protein binding (ortholog); fructose binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose catabolic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; fructose and mannose metabolic pathway; fructosuria pathway; ASSOCIATED WITH autoimmune hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetes mellitus (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); microtubule organizing center (ortholog) 7 57340274 57353391 + 22301074;30032202 116905000 MODEL JAAIVD010000026;XM_032907683 XP_032763574 fructose-bisphosphate aldolase B protein-coding 625988755 LOC116902242 60S ribosomal protein L13-like 5 138044039 138044686 - 116902242 MODEL JAAIVD010000023 pseudo 625988756 LOC116890546 small nucleolar RNA SNORA17 1 102365098 102365226 - 116890546 MODEL JAAIVD010000025;XR_004386723 snorna 625988759 LOC116905839 b(0,+)-type amino acid transporter 1-like 7 28858125 28868643 - 22301074;30032202 116905839 MODEL JAAIVD010000026;XM_032908811;XM_032908812 XP_032764702;XP_032764703 putative L-type amino acid transporter 1-like protein MLAS protein-coding 625988770 LOC116894725 60S ribosomal protein L35-like 2 36664662 36685912 - 116894725 MODEL JAAIVD010000001 pseudo 625988771 Man1b1 mannosidase alpha class 1B member 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); obsolete mannoprotein catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Rafiq syndrome (ortholog); FOUND IN cytoplasmic vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum quality control compartment (ortholog) 5 11833653 11853944 - 22301074;30032202 116901308 MODEL JAAIVD010000023;XM_032903110 XP_032759001 endoplasmic reticulum mannosyl-oligosaccharide 1,2-alpha-mannosidase protein-coding 625988788 Niban3 niban apoptosis regulator 3 13 13357531 13367580 - 116914957 MODEL JAAIVD010000008;XM_032919374 XP_032775265 protein Niban 3 protein-coding 625988806 LOC116900436 olfactory receptor 4C15-like 5 70743672 70744607 - 22301074 116900436 MODEL JAAIVD010000023;XM_032902177 XP_032758068 protein-coding 625988809 LOC116889946 olfactory receptor 6C2-like 1 161467690 161468568 + 22301074;30032202 116889946 MODEL JAAIVD010000025;XM_032890752 XP_032746643 protein-coding 625988812 Disp2 dispatched RND transporter family member 2 5 96942795 96958589 + 116901788 MODEL JAAIVD010000023;XM_032903935;XM_032903936 XP_032759826;XP_032759827 protein dispatched homolog 2 protein-coding 625988827 LOC116913534 60S ribosomal protein L35-like 12 46534208 46534623 + 116913534 MODEL JAAIVD010000007 pseudo 625988828 LOC116910654 small nucleolar RNA SNORD42 9 92257667 92257731 + 116910654 MODEL JAAIVD010000002;XR_004389188 snorna 625988831 Epc2 enhancer of polycomb 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleosome (ortholog) 5 27328348 27419991 + 30032202 116901394 MODEL JAAIVD010000023;XM_032903264;XM_032903265 XP_032759155;XP_032759156 enhancer of polycomb homolog 2 protein-coding 625988850 LOC116894425 keratin-associated protein 20-2-like 2 158849531 158849689 + 116894425 MODEL JAAIVD010000001;XM_032896129 XP_032752020 protein-coding 625988853 Mtmr7 myotubularin related protein 7 ENCODES a protein that exhibits inositol bisphosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 13 46830041 46925674 + 22301074 116914380 MODEL JAAIVD010000008;XM_032918585 XP_032774476 myotubularin-related protein 7 protein-coding 625988871 LOC116901173 torsin-1B 5 4657935 4663966 - 22301074;30032202 116901173 MODEL JAAIVD010000023;XM_032902833;XR_004387964 XP_032758724 protein-coding 625988884 LOC116893941 uncharacterized LOC116893941 2 90183566 90189183 - 116893941 MODEL JAAIVD010000001;XR_004387015 ncrna 625988888 Gaa alpha glucosidase ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog); alpha-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac muscle contraction (ortholog); diaphragm contraction (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH Cardiac Form of Generalized Glycogenosis (ortholog); cardiomyopathy (ortholog); COVID-19 (ortholog); FOUND IN autolysosome lumen (ortholog); lysosome (ortholog); membrane (ortholog) 9 64743466 64760490 - 22301074;30032202 116908746 A0AA49QB00 MODEL JAAIVD010000002;XM_032912098;XM_032912099 XP_032767989;XP_032767990 glucosidase alpha, acid;lysosomal alpha-glucosidase protein-coding 625988915 Crhbp corticotropin releasing hormone binding protein ENCODES a protein that exhibits corticotropin-releasing hormone binding (ortholog); peptide binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); Binge Drinking (ortholog); cocaine abuse (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dendrite (ortholog) 3 222769474 222781805 + 1846945;22301074;30032202 116897372 MODEL JAAIVD010000012;X58023;XM_032899129 CAA41087;XP_032755020 corticotropin-releasing factor binding protein;corticotropin-releasing factor-binding protein protein-coding 625988926 Rxfp3 relaxin family peptide receptor 3 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of cytokinesis (ortholog) 3 169719637 169721562 + 22301074;30032202 116895614 MODEL JAAIVD010000012;XM_032896825 XP_032752716 relaxin-3 receptor 1 protein-coding 625988931 Taok3 TAO kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); MAPK cascade (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog) 16 36549936 36708850 - 22301074;30032202 116885123 MODEL JAAIVD010000004;XM_032886277 XP_032742168 serine/threonine-protein kinase TAO3 protein-coding 625988957 LOC116900255 olfactory receptor 1013-like 5 63105367 63106296 - 22301074;30032202 116900255 MODEL JAAIVD010000023;XM_032902007 XP_032757898 protein-coding 625988960 LOC116897340 phosphoglycerate kinase 1-like 3 215651444 215653141 - 22301074;30032202 116897340 MODEL JAAIVD010000012;XM_032899097 XP_032754988 protein-coding 625988965 LOC116883162 m-AAA protease-interacting protein 1, mitochondrial-like 14 38255573 38257187 + 116883162 MODEL JAAIVD010000009 pseudo 625988966 Sh3rf1 SH3 domain containing ring finger 1 ENCODES a protein that exhibits MAP-kinase scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); neuron migration (ortholog); ASSOCIATED WITH retinal degeneration (ortholog); RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog) 13 27645779 27803685 - 22301074 116914254 MODEL JAAIVD010000008;XM_032918465 XP_032774356 E3 ubiquitin-protein ligase SH3RF1 protein-coding 625988981 LOC116888747 olfactory receptor 13C3 1 102177204 102178241 + 22301074 116888747 MODEL JAAIVD010000025;XM_032890042 XP_032745933 protein-coding 625988985 Twnk twinkle mtDNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); DNA replication (ortholog); DNA-templated DNA replication (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant progressive external ophthalmoplegia 1 (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); FOUND IN mitochondrial chromosome (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 2 44513327 44539810 + 22301074;30032202 116891217 MODEL JAAIVD010000001;XM_032892052;XM_032892053;XM_032892054 XP_032747943;XP_032747944;XP_032747945 twinkle protein, mitochondrial protein-coding 625989002 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92649760 92649831 + 116904831 MODEL JAAIVD010000024 trna 625989003 LOC116903142 tubulin alpha-1A chain-like 1 127770635 127772161 + 116903142 MODEL JAAIVD010000025 pseudo 625989004 Fezf2 FEZ family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axonal fasciculation (ortholog); cell dedifferentiation (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) 12 82411060 82414884 - 30032202 116913813 MODEL JAAIVD010000007;XM_032918124 XP_032774015 fez family zinc finger protein 2 protein-coding 625989013 Tp73 tumor protein p73 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebrospinal fluid secretion (ortholog); digestive tract morphogenesis (ortholog); DNA damage response (ortholog); PARTICIPATES IN altered p53 signaling pathway; Ras mediated signaling pathway; ASSOCIATED WITH adenoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); alveolar rhabdomyosarcoma (ortholog); FOUND IN cell junction (ortholog); centrosome (ortholog); chromatin (ortholog) 1 6601549 6660106 + 22301074;30032202 116886079 MODEL JAAIVD010000025;XM_032887399 XP_032743290 protein-coding 625989031 Igdcc4 immunoglobulin superfamily DCC subclass member 4 8 59406727 59440046 + 22301074;30032202 116906875 MODEL JAAIVD010000027;XM_032909787 XP_032765678 protein-coding 625989055 Plekhg1 pleckstrin homology and RhoGEF domain containing G1 ASSOCIATED WITH nicotine dependence (ortholog); prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 198556641 198753959 + 22301074 116892887 MODEL JAAIVD010000001;XM_032894795 XP_032750686 pleckstrin homology domain-containing family G member 1 protein-coding 625989075 LOC116883578 histone H4-like 14 42751498 42751883 + 116883578 MODEL JAAIVD010000009 pseudo 625989076 LOC116912042 eukaryotic translation initiation factor 3 subunit I-like 11 83015475 83158952 + 116912042 MODEL JAAIVD010000006 pseudo 625989077 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41666989 41667061 + 116884209 MODEL JAAIVD010000009 trna 625989078 LOC116911832 small nucleolar RNA SNORA17 10 39922725 39922855 + 116911832 MODEL JAAIVD010000005;XR_004389367 snorna 625989081 Rd3 RD3 regulator of GUCY2D INVOLVED IN negative regulation of guanylate cyclase activity (ortholog); protein transport (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH Eye Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN cone photoreceptor outer segment (ortholog); cytoplasm (ortholog); nucleus (ortholog) 10 70069302 70071505 + 116911751 MODEL JAAIVD010000005;XM_032915742;XM_032915743 XP_032771633;XP_032771634 protein RD3;retinal degeneration 3, GUCY2D regulator protein-coding 625989088 LOC116887925 retinitis pigmentosa 1-like 1 protein X 58806689 58816479 - 116887925 MODEL JAAIVD010000014 pseudo 625989089 LOC116901078 eukaryotic translation initiation factor 4E-like 5 144353221 144357994 - 116901078 MODEL JAAIVD010000023 pseudo 625989090 LOC116898585 adenosylhomocysteinase-like 4 167458448 167460113 - 116898585 MODEL JAAIVD010000003 pseudo 625989091 LOC116910668 small nucleolar RNA Z17 9 92257274 92257344 + 116910668 MODEL JAAIVD010000002;XR_004389200 snorna 625989094 Trim32 tripartite motif containing 32 ENCODES a protein that exhibits identical protein binding (ortholog); myosin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin ubiquitination (ortholog); autophagosome assembly (ortholog); axon development (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2H (ortholog); Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 11 (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); cytoplasm (ortholog) 1 88083218 88094009 - 22301074 116901189 MODEL JAAIVD010000025;XM_032902882;XM_032902891 XP_032758773;XP_032758782 E3 ubiquitin-protein ligase TRIM32 protein-coding 625989104 Cd7 CD7 molecule ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN homeostasis of number of cells within a tissue (ortholog); interleukin-2-mediated signaling pathway (ortholog); positive regulation of T cell cytokine production (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Experimental Liver Cirrhosis (ortholog); Spontaneous Abortions (ortholog) 9 62994405 62997302 + 30032202 116909845 MODEL JAAIVD010000002;XM_032913571 XP_032769462 T-cell antigen CD7 protein-coding 625989112 LOC116894325 prostatic steroid-binding protein C2 2 151504195 151507068 + 116894325 MODEL JAAIVD010000001;XM_032896021 XP_032751912 protein-coding 625989119 LOC116913210 uncharacterized LOC116913210 12 68619313 68652877 + 116913210 MODEL JAAIVD010000007 pseudo 625989120 LOC116894786 something about silencing protein 10-like 2 4103156 4105045 - 116894786 MODEL JAAIVD010000001 pseudo 625989121 LOC116900132 olfactory receptor 1J4-like 5 14545240 14546178 + 22301074;30032202 116900132 MODEL JAAIVD010000023;XM_032901905 XP_032757796 protein-coding 625989124 Fmo4 flavin containing dimethylaniline monoxygenase 4 INVOLVED IN energy homeostasis (ortholog); negative regulation of fatty acid oxidation (ortholog); xenobiotic catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); trimethylaminuria (ortholog) 10 42068932 42086540 - 22301074;30032202 116911490 MODEL JAAIVD010000005;XM_032915473 XP_032771364 dimethylaniline monooxygenase [N-oxide-forming] 4 protein-coding 625989138 Scrg1 stimulator of chondrogenesis 1 INVOLVED IN mesenchymal stem cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); neuron projection terminus (ortholog) 13 31410758 31432552 - 116914488 MODEL JAAIVD010000008;XM_032918800 XP_032774691 scrapie-responsive protein 1 protein-coding 625989145 LOC116896315 uncharacterized LOC116896315 3 38968504 39122245 + 116896315 MODEL JAAIVD010000012;XM_032897407;XM_032897408;XR_004387324;XR_004387325;XR_004387326;XR_004387327;XR_004387328;XR_004387329;XR_004387330 XP_032753298;XP_032753299 uncharacterized protein LOC116896315 protein-coding 625989175 Usp33 ubiquitin specific peptidase 33 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); cell migration (ortholog); centrosome duplication (ortholog); FOUND IN centrosome (ortholog); focal adhesion (ortholog); Golgi apparatus (ortholog) 3 9237170 9271087 - 22301074 116896153 MODEL JAAIVD010000012;XM_032897137;XM_032897138 XP_032753028;XP_032753029 ubiquitin carboxyl-terminal hydrolase 33 protein-coding 625989206 LOC116914190 U6 spliceosomal RNA 12 2501946 2502052 + 116914190 MODEL JAAIVD010000007;XR_004389729 snrna 625989209 Ankle2 ankyrin repeat and LEM domain containing 2 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitotic nuclear membrane reassembly (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Leukoencephalopathies (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 16 44098225 44127645 - 30032202 116885181 MODEL JAAIVD010000004;XM_032886394;XM_032886395 XP_032742285;XP_032742286 ankyrin repeat and LEM domain-containing protein 2 protein-coding 625989230 Tas2r16 taste 2 receptor member 16 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); external side of plasma membrane (ortholog); trans-Golgi network (ortholog) 6 115344114 115345013 + 22301074;30032202 116902930 MODEL JAAIVD010000024;XM_032905255 XP_032761146 taste receptor type 2 member 16 protein-coding 625989233 LOC116890027 uncharacterized LOC116890027 1 196111876 196113878 - 116890027 MODEL JAAIVD010000025;XR_004386522 ncrna 625989238 LOC116893185 ubiquitin carboxyl-terminal hydrolase 17-like protein A 2 103797705 103800367 + 22301074;30032202 116893185 MODEL JAAIVD010000001;XM_032895088 XP_032750979 protein-coding 625989242 Rpp38 ribonuclease P/MRP subunit p38 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN fibrillar center (ortholog); multimeric ribonuclease P complex (ortholog); nucleolus (ortholog) 1 109988409 109988854 + 30032202 116900152 MODEL JAAIVD010000025;XM_032901943 XP_032757834 ribonuclease P protein subunit p38 protein-coding 625989245 LOC116902125 malignant T-cell-amplified sequence 2 5 132015291 132016527 + 22301074;30032202 116902125 MODEL JAAIVD010000023;XM_032904441 XP_032760332 protein-coding 625989250 LOC116898541 dnaJ homolog subfamily B member 13-like 4 146705851 146706367 - 116898541 MODEL JAAIVD010000003 pseudo 625989251 Mapkap1 MAPK associated protein 1 ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); molecular adaptor activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 1022743 1228330 - 30032202 116901114 MODEL JAAIVD010000023;XM_032902682;XM_032902683;XM_032902684;XM_032902685;XM_032902686;XM_032902687;XM_032902688 XP_032758573;XP_032758574;XP_032758575;XP_032758576;XP_032758577;XP_032758578;XP_032758579 target of rapamycin complex 2 subunit MAPKAP1 protein-coding 625989286 Patj PATJ crumbs cell polarity complex component INVOLVED IN establishment of apical/basal cell polarity (ortholog); microtubule organizing center organization (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); substance-related disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) 1 55804846 56078723 - 22301074 116900008 MODEL JAAIVD010000025;XM_032901812;XM_032901815;XM_032901821;XM_032901826 XP_032757703;XP_032757706;XP_032757712;XP_032757717 inaD-like protein protein-coding 625989339 Dcaf8 DDB1 and CUL4 associated factor 8 INVOLVED IN myotube cell development (ortholog); ASSOCIATED WITH giant axonal neuropathy 2 (ortholog); neurofibromatosis 1 (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 51262227 51309062 + 22301074;30032202 116911521 MODEL JAAIVD010000005;XM_032915515 XP_032771406 DDB1- and CUL4-associated factor 8 protein-coding 625989357 LOC116904362 acyl-CoA-binding domain-containing protein 5-like 6 82782825 82783622 + 116904362 MODEL JAAIVD010000024 pseudo 625989358 Best3 bestrophin 3 ENCODES a protein that exhibits chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); ligand-gated monoatomic anion channel activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); negative regulation of monoatomic ion transport (ortholog); ASSOCIATED WITH aortic dissection (ortholog); atrial fibrillation (ortholog); FOUND IN plasma membrane (ortholog) 1 195135905 195175702 + 22301074 116890020 MODEL JAAIVD010000025;XM_032890801 XP_032746692 bestrophin-3 protein-coding 625989370 Pink1 PTEN induced kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); C3HC4-type RING finger domain binding (ortholog); kinase activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cellular response to hydrogen sulfide (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN altered mitochondrial autophagy pathway; mitochondria dynamics pathway; mitochondrial autophagy pathway; ASSOCIATED WITH cognitive disorder (ortholog); genetic disease (ortholog); late onset Parkinson's disease (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); cell body (ortholog) 1 19895179 19907485 + 22301074;30032202 116893883 MODEL JAAIVD010000025;XM_032895606 XP_032751497 serine/threonine-protein kinase PINK1, mitochondrial protein-coding 625989382 Med22 mediator complex subunit 22 PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 5 9743891 9749264 + 22301074;30032202 116901255 MODEL JAAIVD010000023;XM_032903012 XP_032758903 mediator of RNA polymerase II transcription subunit 22 protein-coding 625989390 Phactr2 phosphatase and actin regulator 2 ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); multiple sclerosis (ortholog) 2 223724461 223983417 + 30032202 116893010 MODEL JAAIVD010000001;XM_032894972 XP_032750863 protein-coding 625989407 Yipf4 Yip1 domain family member 4 FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 7 18766736 18779552 - 22301074;30032202 116905931 MODEL JAAIVD010000026;XM_032908922 XP_032764813 protein YIPF4 protein-coding 625989417 LOC116912364 uncharacterized LOC116912364 11 73036348 73037416 - 116912364 MODEL JAAIVD010000006;XR_004389450 ncrna 625989422 LOC116886764 5S ribosomal RNA 17 43143308 43143426 - 116886764 MODEL JAAIVD010000011;XR_004386165 rrna 625989425 LOC116908438 U2 spliceosomal RNA 8 100345353 100345543 - 116908438 MODEL JAAIVD010000027;XR_004388966 snrna 625989428 LOC116888211 uncharacterized LOC116888211 X 127978593 127983970 - 22301074 116888211 MODEL JAAIVD010000014;XM_032889506 XP_032745397 uncharacterized protein LOC116888211 protein-coding 625989433 Gpm6a glycoprotein M6A ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN neural retina development (ortholog); neuron migration (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN axonal growth cone (ortholog); filopodium (ortholog); glutamatergic synapse (ortholog) 13 34070132 34181026 - 30032202 116914489 MODEL JAAIVD010000008;XM_032918801 XP_032774692 neuronal membrane glycoprotein M6-a protein-coding 625989444 LOC116912318 vomeronasal type-2 receptor 116-like 11 18866855 18875482 - 22301074;30032202 116912318 MODEL JAAIVD010000006;XM_032916338;XM_032916339;XM_032916340;XM_032916341;XM_032916342;XM_032916343 XP_032772229;XP_032772230;XP_032772231;XP_032772232;XP_032772233;XP_032772234 protein-coding 625989463 LOC116897545 small nucleolar RNA SNORA17 3 82846046 82846176 + 116897545 MODEL JAAIVD010000012;XR_004387559 snorna 625989466 LOC116910339 probable low-specificity L-threonine aldolase 2 9 66185982 66191455 + 30032202 116910339 MODEL JAAIVD010000002;XM_032914194 XP_032770085 protein-coding 625989476 Csn1s1 casein alpha s1 FOUND IN extracellular region (ortholog) 11 1229829 1245202 - 22301074;30032202 116912855 MODEL JAAIVD010000006;XM_032917070 XP_032772961 alpha-S1-casein protein-coding 625989509 Sccpdh saccharopine dehydrogenase (putative) FOUND IN lipid droplet (ortholog); midbody (ortholog); mitochondrion (ortholog) 10 57994740 58016225 + 30032202 116911167 MODEL JAAIVD010000005;XM_032915029 XP_032770920 saccharopine dehydrogenase-like oxidoreductase protein-coding 625989525 LOC116906400 small nucleolar RNA SNORD113/SNORD114 family 7 127204681 127204752 + 116906400 MODEL JAAIVD010000026;XR_004388666 snorna 625989528 LOC116905548 uncharacterized LOC116905548 7 8065837 8067740 - 116905548 MODEL JAAIVD010000026;XR_004388552;XR_004388553 ncrna 625989535 LOC116884803 interferon-inducible GTPase 1-like 15 71580446 71581937 - 22301074;30032202 116884803 MODEL JAAIVD010000010;XM_032886037 XP_032741928 protein-coding 625989540 LOC116912606 platelet factor 4 11 4211455 4212342 + 22301074;30032202 116912606 MODEL JAAIVD010000006;XM_032916730 XP_032772621 protein-coding 625989547 Sox6 SRY-box transcription factor 6 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); cardiac muscle cell differentiation (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 85535369 86076163 + 30032202 116891628 MODEL JAAIVD010000001;XM_032892839;XM_032892840;XM_032892841 XP_032748730;XP_032748731;XP_032748732 transcription factor SOX-6 protein-coding 625989575 Utp3 UTP3 small subunit processome component INVOLVED IN brain development (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); small-subunit processome (ortholog) 11 2044677 2046334 + 30032202 116912443 MODEL JAAIVD010000006;XM_032916511 XP_032772402 something about silencing protein 10 protein-coding 625989580 LOC116911783 40S ribosomal protein S8-like 10 42499140 42499744 - 116911783 MODEL JAAIVD010000005 pseudo 625989581 LOC116883227 CCAAT/enhancer-binding protein gamma-like 14 53660226 53718085 + 116883227 MODEL JAAIVD010000009 pseudo 625989582 LOC116889050 cilia- and flagella-associated protein 47-like X 21596659 21659689 + 116889050 MODEL JAAIVD010000014;XM_032890241 XP_032746132 protein-coding 625989591 Btbd7 BTB domain containing 7 INVOLVED IN regulation of branching involved in salivary gland morphogenesis (ortholog); FOUND IN nucleus (ortholog) 7 114057358 114153137 - 22301074;30032202 116905364 MODEL JAAIVD010000026;XM_032908289 XP_032764180 BTB/POZ domain-containing protein 7 protein-coding 625989606 Dytn dystrotelin 4 137575186 137636007 - 22301074;30032202 116898199 MODEL JAAIVD010000003;XM_032899561 XP_032755452 protein-coding 625989622 LOC116899618 UDP-glucuronosyltransferase 1-3-like 4 160219224 160220930 + 22301074 116899618 MODEL JAAIVD010000003;XM_032901580 XP_032757471 protein-coding 625989627 Gabarap GABA type A receptor-associated protein ENCODES a protein that exhibits beta-tubulin binding (ortholog); GABA receptor binding (ortholog); microtubule binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway via death domain receptors (ortholog); microtubule cytoskeleton organization (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN actin cytoskeleton (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 9 49598028 49601746 + 30032202 116910569 MODEL JAAIVD010000002;XM_032914488 XP_032770379 gamma-aminobutyric acid receptor-associated protein protein-coding 625989635 Crebzf CREB/ATF bZIP transcription factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 110591159 110597480 - 22301074 116891850 MODEL JAAIVD010000001;XM_032893219;XM_032893220;XM_032893221 XP_032749110;XP_032749111;XP_032749112 protein-coding 625989649 LOC116889941 olfactory receptor 6C6-like 1 161268026 161276904 + 116889941 MODEL JAAIVD010000025 pseudo 625989650 Dapl1 death associated protein like 1 INVOLVED IN cell population proliferation (ortholog); gene expression (ortholog); negative regulation of CD8-positive, alpha-beta T cell activation (ortholog); FOUND IN nucleus (ortholog) 5 37175298 37192772 + 30032202 116900183 MODEL JAAIVD010000023;XM_032901939 XP_032757830 death-associated protein-like 1 protein-coding 625989658 LOC116914925 60S ribosomal protein L5-like 13 4450308 4467365 + 116914925 MODEL JAAIVD010000008 pseudo 625989659 Ccdc70 coiled-coil domain containing 70 FOUND IN plasma membrane (ortholog) 13 64453356 64457520 - 116914256 MODEL JAAIVD010000008;XM_032918467 XP_032774358 coiled-coil domain-containing protein 70 protein-coding 625989665 LOC116888013 probable 28S rRNA (cytosine-C(5))-methyltransferase X 79643351 79647797 + 116888013 MODEL JAAIVD010000014 pseudo 625989666 Sox5 SRY-box transcription factor 5 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN asymmetric neuroblast division (ortholog); cartilage condensation (ortholog); cartilage development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 6 1576650 1945796 - 30032202 116903074 MODEL JAAIVD010000024;XM_032905393 XP_032761284 transcription factor SOX-5 protein-coding 625989685 Sim2 SIM bHLH transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN embryonic pattern specification (ortholog); lung development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH cleft palate (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 50512036 50551269 - 22301074;30032202 116898968 MODEL JAAIVD010000003;XM_032900393 XP_032756284 single-minded homolog 2 protein-coding 625989700 Mapkapk5 MAPK activated protein kinase 5 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); p53 binding (ortholog); protein kinase activity (ortholog); INVOLVED IN negative regulation of TOR signaling (ortholog); positive regulation of dendritic spine development (ortholog); positive regulation of telomere maintenance (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH NEUROCARDIOFACIODIGITAL SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 32262656 32282228 + 22301074;30032202 116885401 MODEL JAAIVD010000004;XM_032886682;XM_032886683;XM_032886684 XP_032742573;XP_032742574;XP_032742575 MAP kinase-activated protein kinase 5 protein-coding 625989724 LOC116887700 single-minded homolog 1 18 49267160 49282267 + 22301074;30032202 116887700 MODEL JAAIVD010000013;XM_032889294 XP_032745185 protein-coding 625989734 LOC116893754 40S ribosomal protein S17-like 2 27035912 27036297 + 22301074;30032202 116893754 MODEL JAAIVD010000001;XM_032895459 XP_032751350 protein-coding 625989737 Hoxc9 homeobox C9 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN aggresome (ortholog); nucleoplasm (ortholog); transcription repressor complex (ortholog) 1 260098465 260101156 - 22301074;30032202 116890187 MODEL JAAIVD010000025;XM_032890923 XP_032746814 homeobox protein Hox-C9 protein-coding 625989742 Tmem164 transmembrane protein 164 INVOLVED IN positive regulation of ferroptosis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog) X 94780485 94936724 + 116889243 MODEL JAAIVD010000014;XM_032890393;XM_032890394;XM_032890395;XM_032890396;XM_032890397;XM_032890398 XP_032746284;XP_032746285;XP_032746286;XP_032746287;XP_032746288;XP_032746289 protein-coding 625989766 LOC116893521 cytosolic purine 5'-nucleotidase-like 2 196716602 196718402 + 116893521 MODEL JAAIVD010000001 pseudo 625989767 Grhl1 grainyhead like transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN desmosome organization (ortholog); epidermis development (ortholog); establishment of skin barrier (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 38186149 38229942 + 30032202 116904913 MODEL JAAIVD010000026;XM_032907522 XP_032763413 grainyhead-like protein 1 homolog protein-coding 625989787 Mc4r melanocortin 4 receptor ENCODES a protein that exhibits hormone binding (ortholog); melanocortin receptor activity (ortholog); melanocyte-stimulating hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); diet induced thermogenesis (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered melanocortin system pathway; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Acute-Phase Reaction (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog) 15 64415249 64417181 + 22301074;30032202 116884534 MODEL JAAIVD010000010;XM_032885669 XP_032741560 melanocortin receptor 4 protein-coding 625989792 Adh5 alcohol dehydrogenase 5 (class III), chi polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); fatty acid binding (ortholog); formaldehyde dehydrogenase (NAD+) activity (ortholog); INVOLVED IN ethanol catabolic process (ortholog); fatty acid omega-oxidation (ortholog); formaldehyde catabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); AMED syndrome (ortholog); asthma (ortholog); FOUND IN mitochondrion (ortholog) 3 20704324 20716684 - 22301074;30032202 116896209 MODEL JAAIVD010000012;XM_032897258;XM_032897259 XP_032753149;XP_032753150 alcohol dehydrogenase class-3 protein-coding 625989808 LOC116901032 transcriptional enhancer factor TEF-4-like 5 129977527 129978846 + 116901032 MODEL JAAIVD010000023 pseudo 625989809 Coq8a coenzyme Q8A ENCODES a protein that exhibits ADP binding (ortholog); enzyme activator activity (ortholog); kinase activity (ortholog); INVOLVED IN phosphorylation (ortholog); protein phosphorylation (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive cerebellar ataxia (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); cerebellar ataxia (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 10 58499250 58528280 - 30032202 116911271 MODEL JAAIVD010000005;XM_032915175 XP_032771066 atypical kinase COQ8A, mitochondrial protein-coding 625989828 LOC116901028 galactokinase-like 5 129737480 129738689 + 116901028 MODEL JAAIVD010000023 pseudo 625989829 Minar2 membrane integral NOTCH2 associated receptor 2 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN angiogenesis (ortholog); apoptotic process (ortholog); exploration behavior (ortholog); ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 120 (ortholog); Parkinson's disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosomal membrane (ortholog); stereocilium (ortholog) 15 72762671 72776480 - 116884820 MODEL JAAIVD010000010;XM_032886049;XM_032886050 XP_032741940;XP_032741941 major intrinsically disordered NOTCH2-binding receptor 1-like protein-coding 625989843 Rps15 ribosomal protein S15 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); structural constituent of ribosome (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN liver regeneration (ortholog); positive regulation of signal transduction by p53 class mediator (ortholog); ribosomal small subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Disease Progression (ortholog); insulinoma (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 1 154586580 154588186 - 22301074;30032202 116889862 MODEL JAAIVD010000025;XM_032890688 XP_032746579 40S ribosomal protein S15 protein-coding 625989851 LOC116913302 uncharacterized LOC116913302 12 74452585 74455561 + 116913302 MODEL JAAIVD010000007;XR_004389602 ncrna 625989856 LOC116912363 SEC14-like protein 4 11 73024129 73040173 + 30032202 116912363 MODEL JAAIVD010000006;XM_032916422;XM_032916423 XP_032772313;XP_032772314 protein-coding 625989875 LOC116895712 low molecular weight phosphotyrosine protein phosphatase-like 3 216008834 216009278 + 116895712 MODEL JAAIVD010000012 pseudo 625989876 LOC116903978 aldo-keto reductase family 1 member B7 6 105234420 105242776 - 30032202 116903978 MODEL JAAIVD010000024;XM_032906786 XP_032762677 protein-coding 625989889 Nkain4 sodium/potassium transporting ATPase interacting 4 FOUND IN membrane (ortholog) 5 158044404 158063780 - 30032202 116902424 MODEL JAAIVD010000023;XM_032904954 XP_032760845 sodium/potassium-transporting ATPase subunit beta-1-interacting protein 4 protein-coding 625989898 Rbm19 RNA binding motif protein 19 INVOLVED IN positive regulation of embryonic development (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 16 33626641 33711500 - 22301074 116885556 MODEL JAAIVD010000004;XM_032886848 XP_032742739 probable RNA-binding protein 19 protein-coding 625989926 LOC116911493 nuclear receptor subfamily 5 group A member 2-like 10 2268362 2275997 + 30032202 116911493 MODEL JAAIVD010000005;XM_032915477 XP_032771368 protein-coding 625989932 LOC116894443 secretoglobin family 2B member 2-like 2 164746935 164748982 - 22301074;30032202 116894443 MODEL JAAIVD010000001;XM_032896145;XM_032896146 XP_032752036;XP_032752037 protein-coding 625989940 Slc38a2 solute carrier family 38 member 2 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import (ortholog); amino acid transmembrane transport (ortholog); ASSOCIATED WITH Contusions (ortholog); Experimental Diabetes Mellitus (ortholog); Experimental Seizures (ortholog); FOUND IN axon (ortholog); brush border (ortholog); cytoplasm (ortholog) 1 269531667 269545633 - 30032202 116884459 MODEL JAAIVD010000025;XM_032885562;XM_032885571;XM_032885580;XM_032885588;XM_032885596;XM_032885604 XP_032741453;XP_032741462;XP_032741471;XP_032741479;XP_032741487;XP_032741495 sodium-coupled neutral amino acid transporter 2 protein-coding 625989974 Utp15 UTP15 small subunit processome component INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); fibrillar center (ortholog) 3 198334517 198352866 + 22301074;30032202 116897260 MODEL JAAIVD010000012;XM_032898996 XP_032754887 U3 small nucleolar RNA-associated protein 15 homolog protein-coding 625989991 Faim2 Fas apoptotic inhibitory molecule 2 INVOLVED IN cerebellar granular layer development (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellar Purkinje cell layer development (ortholog); PARTICIPATES IN FasL mediated signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 272310308 272336614 - 30032202 116885162 MODEL JAAIVD010000025;XM_032886377;XM_032886385 XP_032742268;XP_032742276 protein lifeguard 2 protein-coding 625990011 LOC116901837 60S ribosomal protein L17-like 5 98629604 98630174 - 116901837 MODEL JAAIVD010000023 pseudo 625990012 LOC116885849 zinc finger protein 709-like 16 3184853 3187239 + 30032202 116885849 MODEL JAAIVD010000004;XM_032887186 XP_032743077 protein-coding 625990017 LOC116898165 glyceraldehyde-3-phosphate dehydrogenase-like 4 122566424 122567356 + 116898165 MODEL JAAIVD010000003 pseudo 625990018 LOC116887685 olfactory receptor 10C1 18 10157830 10158768 - 22301074 116887685 MODEL JAAIVD010000013;XM_032889280 XP_032745171 protein-coding 625990021 Eno1 enolase 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); GTPase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-7 (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 1 10500606 10511615 - 22301074;30032202 116892520 MODEL JAAIVD010000025;XM_032894279 XP_032750170 alpha-enolase protein-coding 625990037 LOC116897914 gamma-aminobutyric acid receptor-associated protein-like 2 4 39457677 39458049 - 116897914 MODEL JAAIVD010000003 pseudo 625990038 Grk2 G protein-coupled receptor kinase 2 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); delta-type opioid receptor binding (ortholog); Edg-2 lysophosphatidic acid receptor binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to catecholamine stimulus (ortholog); cellular response to chemokine (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH allergic contact dermatitis (ortholog); asphyxiating thoracic dystrophy (ortholog); bacterial pneumonia (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); basolateral plasma membrane (ortholog) 2 3339548 3358990 + 22301074;30032202 116890772 MODEL JAAIVD010000001;XM_032891238 XP_032747129 beta-adrenergic receptor kinase 1 protein-coding 625990063 Pou4f3 POU class 4 homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon extension (ortholog); inner ear auditory receptor cell differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 15 (ortholog); Deafness (ortholog); Hearing Loss (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 3567074 3569657 + 22301074;30032202 116884719 MODEL JAAIVD010000010;XM_032885905 XP_032741796 POU domain, class 4, transcription factor 3 protein-coding 625990068 LOC116904320 sperm motility kinase X-like 6 61098414 61114943 - 116904320 MODEL JAAIVD010000024 pseudo 625990069 LOC116904671 U1 spliceosomal RNA 6 27380522 27380685 + 116904671 MODEL JAAIVD010000024;XR_004388371 snrna 625990072 LOC116892982 casein kinase I-like 1 13241253 13243031 - 116892982 MODEL JAAIVD010000025 pseudo 625990073 Bricd5 BRICHOS domain containing 5 9 1758933 1760191 + 30032202 116910471 MODEL JAAIVD010000002;XM_032914343 XP_032770234 BRICHOS domain-containing protein 5 protein-coding 625990082 LOC116885496 disintegrin and metalloproteinase domain-containing protein 1b-like 16 32305496 32307902 + 116885496 MODEL JAAIVD010000004 pseudo 625990083 Ndufa7 NADH:ubiquinone oxidoreductase subunit A7 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 158578188 158591702 - 22301074;30032202 116907013 MODEL JAAIVD010000025;XM_032909951 XP_032765842 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7 protein-coding 625990091 Brpf3 bromodomain and PHD finger containing 3 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of DNA replication (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleus (ortholog) 18 5022353 5059082 - 22301074;30032202 116886912 MODEL JAAIVD010000013;XM_032888377;XM_032888378;XM_032888379;XM_032888380;XM_032888382 XP_032744268;XP_032744269;XP_032744270;XP_032744271;XP_032744273 bromodomain and PHD finger-containing protein 3 protein-coding 625990119 LOC116887742 small nucleolar RNA SNORA26 18 30648105 30648225 + 116887742 MODEL JAAIVD010000013;XR_004386248 snorna 625990122 LOC116884733 protocadherin gamma-B1-like 15 7243454 7248442 - 22301074 116884733 MODEL JAAIVD010000010;XM_032885947 XP_032741838 protein-coding 625990127 Myog myogenin ENCODES a protein that exhibits chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to lithium ion (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); obesity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) 10 1398177 1400805 - 22301074;30032202 116911662 MODEL JAAIVD010000005;XM_032915616 XP_032771507 protein-coding 625990134 LOC116894296 E3 ubiquitin-protein ligase TRAF7-like 2 137502819 137504859 - 116894296 MODEL JAAIVD010000001 pseudo 625990135 LOC116910771 U6 spliceosomal RNA 9 81928614 81928720 - 116910771 MODEL JAAIVD010000002;XR_004389279 snrna 625990138 Scube2 signal peptide, CUB domain and EGF like domain containing 2 ENCODES a protein that exhibits hedgehog family protein binding (ortholog); INVOLVED IN chondrocyte differentiation involved in endochondral bone morphogenesis (ortholog); positive regulation of chondrocyte proliferation (ortholog); positive regulation of ossification (ortholog); FOUND IN extracellular space (ortholog) 2 91604628 91669696 + 22301074;30032202 116893145 MODEL JAAIVD010000001;XM_032895069 XP_032750960 signal peptide, CUB and EGF-like domain-containing protein 2 protein-coding 625990163 Kcne4 potassium voltage-gated channel subfamily E regulatory subunit 4 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); transmembrane transporter binding (ortholog); FOUND IN apical plasma membrane (ortholog) 4 152001235 152004429 + 22301074;30032202 116898238 MODEL JAAIVD010000003;XM_032899590 XP_032755481 potassium voltage-gated channel subfamily E member 4 protein-coding 625990169 Smyd3 SET and MYND domain containing 3 ENCODES a protein that exhibits histone H3K36 dimethyltransferase activity (ortholog); histone H4 methyltransferase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); establishment of protein localization (ortholog); myotube cell development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); nonprogressive cerebellar ataxia with mental retardation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 57307200 57854565 - 22301074;30032202 116911387 MODEL JAAIVD010000005;XM_032915339;XM_032915340 XP_032771230;XP_032771231 histone-lysine N-methyltransferase SMYD3 protein-coding 625990188 Csnk2a2 casein kinase 2 alpha 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); double-strand break repair (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH male infertility (ortholog); Oxygen-Induced Retinopathy (ortholog); Skin Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); chromatin (ortholog); nucleus (ortholog) 17 2296822 2335984 - 22301074;30032202 116886702 MODEL JAAIVD010000011;XM_032888206;XM_032888207;XM_032888208 XP_032744097;XP_032744098;XP_032744099 casein kinase II subunit alpha' protein-coding 625990206 LOC116901037 nuclear factor NF-kappa-B p100 subunit-like 5 130838264 130841720 + 116901037 MODEL JAAIVD010000023 pseudo 625990207 Klhl8 kelch like family member 8 INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) 11 13955516 13978558 - 22301074 116912309 MODEL JAAIVD010000006;XM_032916329 XP_032772220 kelch-like protein 8 protein-coding 625990220 LOC116910662 small nucleolar RNA SNORD95 9 31401618 31401685 + 116910662 MODEL JAAIVD010000002;XR_004389194 snorna 625990223 LOC116894633 39S ribosomal protein L46, mitochondrial-like 2 194514820 194515803 - 116894633 MODEL JAAIVD010000001 pseudo 625990224 LOC116885780 olfactory receptor 13C7-like 1 2664989 2665948 - 22301074 116885780 MODEL JAAIVD010000025;XM_032887112 XP_032743003 protein-coding 625990227 LOC116911205 5-hydroxytryptamine receptor 5B 10 14105476 14117744 - 22301074;30032202 116911205 MODEL JAAIVD010000005;XM_032915080 XP_032770971 protein-coding 625990232 LOC116885911 claudin-4-like 16 19123418 19124074 + 30032202 116885911 MODEL JAAIVD010000004;XM_032887226 XP_032743117 protein-coding 625990235 LOC116892647 FYVE, RhoGEF and PH domain-containing protein 4-like 2 176882070 176884786 - 116892647 MODEL JAAIVD010000001 pseudo 625990236 LOC116908611 uncharacterized LOC116908611 1 179525466 180277183 - 116908611 MODEL JAAIVD010000025;XR_004389000 ncrna 625990241 LOC116903581 peptidyl-prolyl cis-trans isomerase D-like 6 17432172 17435977 + 116903581 MODEL JAAIVD010000024 pseudo 625990242 LOC116895212 medium-chain specific acyl-CoA dehydrogenase, mitochondrial-like 3 7508004 7533980 + 116895212 MODEL JAAIVD010000012 pseudo 625990243 Rpl36al ribosomal protein L36a like FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 82844190 82845629 - 22301074;30032202 116905114 MODEL JAAIVD010000026;XM_032907852;XM_032907853 XP_032763743;XP_032763744 60S ribosomal protein L36a-like protein-coding 625990252 Scp2 sterol carrier protein 2 ENCODES a protein that exhibits acetyl-CoA C-acyltransferase activity (ortholog); acetyl-CoA C-myristoyltransferase activity (ortholog); cholesterol binding (ortholog); INVOLVED IN acylglycerol metabolic process (ortholog); alpha-linolenic acid metabolic process (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH dystonia (ortholog); Experimental Diabetes Mellitus (ortholog); leukodystrophy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); mitochondrion (ortholog) 1 46715801 46788153 + 22301074 116899184 MODEL JAAIVD010000025;XM_032900762 XP_032756653 non-specific lipid-transfer protein protein-coding 625990272 LOC116906376 small nucleolar RNA SNORD113/SNORD114 family 7 127253072 127253146 + 116906376 MODEL JAAIVD010000026;XR_004388645 snorna 625990275 LOC116898119 high mobility group protein B1-like 4 106388378 106389238 - 116898119 MODEL JAAIVD010000003 pseudo 625990276 LOC116910683 small nucleolar RNA SNORA7 9 48603707 48603846 + 116910683 MODEL JAAIVD010000002;XR_004389214 snorna 625990279 LOC116891878 40S ribosomal protein S8-like 2 13418223 13418871 + 116891878 MODEL JAAIVD010000001 pseudo 625990280 LOC116898153 uncharacterized LOC116898153 4 116857324 116884514 + 116898153 MODEL JAAIVD010000003;XR_004387637;XR_004387638 ncrna 625990288 C3ar1 complement C3a receptor 1 ENCODES a protein that exhibits complement component C3a binding (ortholog); complement component C3a receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); complement receptor mediated signaling pathway (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); atypical hemolytic-uremic syndrome (ortholog); FOUND IN plasma membrane (ortholog) 6 24251703 24253209 + 22301074;30032202 116904598 MODEL JAAIVD010000024;XM_032907393 XP_032763284 C3a anaphylatoxin chemotactic receptor protein-coding 625990292 Cplane1 ciliogenesis and planar polarity effector complex subunit 1 INVOLVED IN cardiac septum development (ortholog); cerebellum development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Jaundice (ortholog); FOUND IN ciliary transition zone (ortholog) 3 172236903 172334107 - 30032202 116897141 MODEL JAAIVD010000012;XM_032898803 XP_032754694 ciliogenesis and planar polarity effector 1 protein-coding 625990349 LOC116902641 U2 spliceosomal RNA 5 93583753 93583912 + 116902641 MODEL JAAIVD010000023 pseudo 625990350 LOC116899730 uncharacterized LOC116899730 4 182444722 182461578 - 116899730 MODEL JAAIVD010000003;XR_004387752 ncrna 625990357 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31419071 31419143 + 116910835 MODEL JAAIVD010000002 trna 625990358 Rnf225 ring finger protein 225 2 174248737 174250438 - 30032202 116892626 MODEL JAAIVD010000001;XM_032894444 XP_032750335 protein-coding 625990363 Paqr3 progestin and adipoQ receptor family member 3 ENCODES a protein that exhibits protein-membrane adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of MAP kinase activity (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of peptidyl-serine phosphorylation (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 11 7160206 7177080 + 22301074;30032202 116912502 MODEL JAAIVD010000006;XM_032916586;XM_032916587;XM_032916588;XM_032916589 XP_032772477;XP_032772478;XP_032772479;XP_032772480 protein-coding 625990381 LOC116898930 40S ribosomal protein S17-like 4 46614633 46616110 + 116898930 MODEL JAAIVD010000003 pseudo 625990382 LOC116896407 acidic mammalian chitinase 3 51985956 52012945 + 22301074;30032202 116896407 MODEL JAAIVD010000012;XM_032897551 XP_032753442 protein-coding 625990395 LOC116890330 U6 spliceosomal RNA 1 63583852 63583958 - 116890330 MODEL JAAIVD010000025;XR_004386553 snrna 625990398 Cacna1d calcium voltage-gated channel subunit alpha1 D ENCODES a protein that exhibits alpha-actinin binding (ortholog); ankyrin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; insulin secretion pathway; ASSOCIATED WITH adenoma (ortholog); Alcohol Withdrawal Seizures (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 13 5757234 6051056 - 22301074;30032202 116915056 MODEL JAAIVD010000008;XM_032919472;XM_032919473;XM_032919474 XP_032775363;XP_032775364;XP_032775365 voltage-dependent L-type calcium channel subunit alpha-1D protein-coding 625990456 LOC116897490 5.8S ribosomal RNA 3 92360507 92360659 - 116897490 MODEL JAAIVD010000012;XR_004387511 rrna 625990459 Skap2 src kinase associated phosphoprotein 2 INVOLVED IN negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 89058004 89238093 + 22301074;30032202 116903812 MODEL JAAIVD010000024;XM_032906515 XP_032762406 src kinase-associated phosphoprotein 2 protein-coding 625990476 LOC116890378 U6 spliceosomal RNA 1 207707196 207707302 + 116890378 MODEL JAAIVD010000025;XR_004386590 snrna 625990479 LOC116913186 dynein light chain 1, cytoplasmic-like 12 61306328 61310719 - 116913186 MODEL JAAIVD010000007 pseudo 625990480 LOC116908202 HCLS1-associated protein X-1-like 8 65340083 65340997 - 116908202 MODEL JAAIVD010000027 pseudo 625990481 Nek1 NIMA related kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); DNA damage response (ortholog); kidney development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 24 (ortholog); asphyxiating thoracic dystrophy (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cilium (ortholog) 13 27893423 28019718 - 22301074;30032202 116914248 MODEL JAAIVD010000008;XM_032918458 XP_032774349 serine/threonine-protein kinase Nek1 protein-coding 625990519 LOC116895706 G/T mismatch-specific thymine DNA glycosylase-like 3 213402580 213403911 + 116895706 MODEL JAAIVD010000012 pseudo 625990520 Itsn1 intersectin 1 ENCODES a protein that exhibits kinase activator activity (ortholog); molecular adaptor activity (ortholog); proline-rich region binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN apical dendrite (ortholog); calyx of Held (ortholog); clathrin-coated pit (ortholog) 4 52692134 52868443 - 22301074;30032202 116898985 MODEL JAAIVD010000003;XM_032900412;XM_032900413;XM_032900414 XP_032756303;XP_032756304;XP_032756305 intersectin-1 protein-coding 625990570 LOC116914955 myocyte-specific enhancer factor 2B 13 12432723 12435567 + 22301074;30032202 116914955 MODEL JAAIVD010000008;XM_032919372 XP_032775263 protein-coding 625990581 Pygo2 pygopus family PHD finger 2 FOUND IN beta-catenin-TCF complex (ortholog) 3 64230896 64236026 - 30032202 116896640 MODEL JAAIVD010000012;XM_032897959;XM_032897960 XP_032753850;XP_032753851 pygopus homolog 2 protein-coding 625990592 Akirin1 akirin 1 INVOLVED IN myoblast migration involved in skeletal muscle regeneration (ortholog); negative regulation of satellite cell differentiation (ortholog); negative regulation of skeletal muscle satellite cell proliferation (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 34539688 34554497 + 30032202 116896966 MODEL JAAIVD010000025;XM_032898546 XP_032754437 akirin-1 protein-coding 625990601 LOC116897466 U7 small nuclear RNA 3 150204193 150204255 - 116897466 MODEL JAAIVD010000012;XR_004387494 snrna 625990604 LOC116893701 olfactory receptor 5B3-like 2 13174672 13183207 + 22301074;30032202 116893701 MODEL JAAIVD010000001;XM_032895418 XP_032751309 protein-coding 625990608 Bik BCL2 interacting killer ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); male gonad development (ortholog); positive regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH ataxia telangiectasia (ortholog); breast cancer (ortholog); colon cancer (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); mitochondrial envelope (ortholog) 1 252943683 252962196 + 22301074;30032202 116890161 MODEL JAAIVD010000025;XM_032890896;XM_032890897 XP_032746787;XP_032746788 bcl-2-interacting killer protein-coding 625990620 Spryd3 SPRY domain containing 3 1 260940840 260957838 + 22301074 116883616 MODEL JAAIVD010000025;XM_032884810 XP_032740701 SPRY domain-containing protein 3 protein-coding 625990635 Gpr34 G protein-coupled receptor 34 ASSOCIATED WITH ovarian cyst (ortholog) X 20630619 20637939 + 22301074;30032202 116889406 MODEL JAAIVD010000014;XM_032890509 XP_032746400 probable G-protein coupled receptor 34 protein-coding 625990642 LOC116895331 HAUS augmin-like complex subunit 5 3 35274389 35276524 - 22301074;30032202 116895331 MODEL JAAIVD010000012;XM_032896638 XP_032752529 protein-coding 625990646 Rbpjl recombination signal binding protein for immunoglobulin kappa J region like ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 5 153550087 153561836 - 22301074;30032202 116902363 MODEL JAAIVD010000023;XM_032904857 XP_032760748 recombining binding protein suppressor of hairless-like protein protein-coding 625990662 LOC116897794 olfactory receptor 2AJ1-like 4 4505446 4506390 - 22301074 116897794 MODEL JAAIVD010000003;XM_032899215 XP_032755106 protein-coding 625990665 LOC116911637 60S ribosomal protein L35-like 10 34574639 34574981 + 116911637 MODEL JAAIVD010000005 pseudo 625990666 LOC116910950 splicing factor, proline- and glutamine-rich-like 10 80434595 80463842 + 116910950 MODEL JAAIVD010000005 pseudo 625990667 LOC116915218 prolactin-5A1-like 14 47292275 47298652 + 22301074;30032202 116915218 MODEL JAAIVD010000009;XM_032919598 XP_032775489 protein-coding 625990676 Susd3 sushi domain containing 3 FOUND IN plasma membrane (ortholog) 14 68216485 68232961 - 30032202 116883475 MODEL JAAIVD010000009;XM_032884630 XP_032740521 sushi domain-containing protein 3 protein-coding 625990685 LOC116895372 40S ribosomal protein S6-like 3 53133356 53134440 - 116895372 MODEL JAAIVD010000012 pseudo 625990686 Scx scleraxis bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell differentiation (ortholog); cellular response to BMP stimulus (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 1 248789563 248791665 + 22301074;30032202 116913190 MODEL JAAIVD010000025;XM_032917386 XP_032773277 basic helix-loop-helix transcription factor scleraxis protein-coding 625990692 LOC116907479 poly(rC)-binding protein 2-like 8 15563608 15564712 + 116907479 MODEL JAAIVD010000027 pseudo 625990693 Eppk1 epiplakin 1 ENCODES a protein that exhibits intermediate filament binding (ortholog); keratin filament binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); intermediate filament bundle assembly (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH Chloracne (ortholog); myoepithelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) 1 248422464 248444505 - 22301074;30032202 116912913 MODEL JAAIVD010000025;XM_032917174 XP_032773065 epiplakin protein-coding 625990699 LOC116897956 olfactory receptor 5AC1-like 4 43197158 43198078 - 22301074;30032202 116897956 MODEL JAAIVD010000003;XM_032899359 XP_032755250 protein-coding 625990702 Stx8 syntaxin 8 ENCODES a protein that exhibits chloride channel inhibitor activity (ortholog); syntaxin binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); late endosome (ortholog) 9 47567448 47801376 + 30032202 116908494 MODEL JAAIVD010000002;XM_032911651 XP_032767542 syntaxin-8 protein-coding 625990714 Adamts19 ADAM metallopeptidase with thrombospondin type 1 motif 19 INVOLVED IN aortic valve morphogenesis (ortholog); collagen fibril organization (ortholog); mitral valve morphogenesis (ortholog); ASSOCIATED WITH aortic valve disease (ortholog); CARDIAC VALVULAR DYSPLASIA 2 (ortholog); genetic disease (ortholog) 15 72785063 72975916 - 22301074;30032202 116884802 MODEL JAAIVD010000010;XM_032886036 XP_032741927 A disintegrin and metalloproteinase with thrombospondin motifs 19 protein-coding 625990740 LOC116889722 ATP synthase subunit beta-like 22301074 116889722 MODEL JAAIVD010000061;XM_032890600 XP_032746491 protein-coding 625990741 LOC116912579 40S ribosomal protein S27-like 11 88395348 88395640 - 22301074;30032202 116912579 MODEL JAAIVD010000006;XM_032916696 XP_032772587 protein-coding 625990746 LOC116908281 mitochondrial pyruvate carrier 1-like 8 57380761 57381133 - 116908281 MODEL JAAIVD010000027 pseudo 625990747 LOC116889821 melanoma-associated antigen 10-like 116889821 MODEL JAAIVD010001163 pseudo 625990748 LOC116887828 heterogeneous nuclear ribonucleoprotein A1-like 1 61100096 61100938 + 22301074 116887828 MODEL JAAIVD010000025;XM_032889344 XP_032745235 protein-coding 625990752 LOC116902786 ATP synthase subunit g, mitochondrial-like 6 76770405 76770798 + 116902786 MODEL JAAIVD010000024 pseudo 625990753 LOC116911805 U1 spliceosomal RNA 10 50125174 50125337 + 116911805 MODEL JAAIVD010000005;XR_004389345 snrna 625990756 LOC116914637 uncharacterized LOC116914637 13 27839755 27845476 - 116914637 MODEL JAAIVD010000008;XR_004389757 ncrna 625990761 Spink1 serine peptidase inhibitor Kazal type 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); establishment of localization in cell (ortholog); negative regulation of calcium ion import (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); cervical adenocarcinoma (ortholog); Chronic Experimental Pancreatitis (ortholog); FOUND IN extracellular space (ortholog) 15 1245701 1254951 + 22301074 116884598 MODEL JAAIVD010000010;XM_032885738 XP_032741629 serine protease inhibitor Kazal-type 1 protein-coding 625990769 Septin8 septin 8 ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN regulation of intracellular protein transport (ortholog); regulation of protein stability (ortholog); regulation of SNARE complex assembly (ortholog); FOUND IN myelin sheath (ortholog); presynapse (ortholog); septin complex (ortholog) 9 36015157 36043273 + 22301074;30032202 116908499 MODEL JAAIVD010000002;XM_032911655;XM_032911656;XM_032911659;XM_032911660;XM_032911661;XM_032911662;XM_032911663;XM_032911664;XM_032911665;XM_032911666;XM_032911667;XM_032911668 XP_032767546;XP_032767547;XP_032767550;XP_032767551;XP_032767552;XP_032767553;XP_032767554;XP_032767555;XP_032767556;XP_032767557;XP_032767558;XP_032767559 septin-8 protein-coding 625990818 Lrtm3 leucine rich repeat transmembrane protein 3 4 120107375 120145158 - 116898485 MODEL JAAIVD010000003;XM_032899731 XP_032755622 Ccdc168 coiled-coil domain containing 168;coiled-coil domain-containing protein 168 protein-coding 625990826 LOC116907029 olfactory receptor 150-like 8 32434610 32435544 - 22301074;30032202 116907029 MODEL JAAIVD010000027;XM_032909971 XP_032765862 protein-coding 625990829 Fam120c family with sequence similarity 120 member C X 12466694 12574402 + 30032202 116888987 MODEL JAAIVD010000014;XM_032890205 XP_032746096 constitutive coactivator of PPAR-gamma-like protein 2;family with sequence similarity 120C protein-coding 625990848 Krtcap2 keratinocyte associated protein 2 ENCODES a protein that exhibits enzyme activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN protein N-linked glycosylation (ortholog); protein N-linked glycosylation via asparagine (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog) 3 64426730 64430282 - 116896656 MODEL JAAIVD010000012;XM_032897988;XM_032897989;XM_032897991;XM_032897992 XP_032753879;XP_032753880;XP_032753882;XP_032753883 keratinocyte-associated protein 2 protein-coding 625990863 Apbb1ip amyloid beta precursor protein binding family B member 1 interacting protein INVOLVED IN positive regulation of cell adhesion (ortholog); T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) 14 1690565 1779867 - 22301074;30032202 116883837 MODEL JAAIVD010000009;XM_032885099 XP_032740990 amyloid beta A4 precursor protein-binding family B member 1-interacting protein protein-coding 625990881 LOC116899696 uncharacterized LOC116899696 4 175766328 175767328 + 116899696 MODEL JAAIVD010000003;XR_004387748 ncrna 625990885 LOC116894690 zinc finger protein 32-like 2 214683161 214683987 + 116894690 MODEL JAAIVD010000001 pseudo 625990886 LOC116894508 60S ribosomal protein L35-like 2 173278509 173278915 + 116894508 MODEL JAAIVD010000001 pseudo 625990887 LOC116895854 vomeronasal type-2 receptor 1-like 3 90915957 90916511 + 22301074;30032202 116895854 MODEL JAAIVD010000012;XM_032896961 XP_032752852 protein-coding 625990890 LOC116902850 olfactory receptor 2A1/2A42-like 6 97415279 97416241 - 22301074 116902850 MODEL JAAIVD010000024;XM_032905177 XP_032761068 protein-coding 625990893 Stau2 staufen double-stranded RNA binding protein 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); Hsp70 protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN anterograde dendritic transport of messenger ribonucleoprotein complex (ortholog); cellular response to oxidative stress (ortholog); eye morphogenesis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); microphthalmia (ortholog); FOUND IN axon (ortholog); cytoplasmic stress granule (ortholog); dendrite (ortholog) 1 150581474 150817884 - 116904078 MODEL JAAIVD010000025;XM_032906946;XM_032906953 XP_032762837;XP_032762844 double-stranded RNA-binding protein Staufen homolog 2 protein-coding 625990914 Clpsl2 colipase like 2 18 5308840 5311672 - 22301074;30032202 116886857 MODEL JAAIVD010000013;XM_032888312 XP_032744203 colipase-like protein 2 protein-coding 625990921 LOC116902252 uncharacterized LOC116902252 5 140178794 140183556 + 116902252 MODEL JAAIVD010000023;XR_004388058 ncrna 625990926 LOC116886303 sulfotransferase 2B1-like 17 42760705 42775604 - 22301074;30032202 116886303 MODEL JAAIVD010000011;XM_032887746;XM_032887747 XP_032743637;XP_032743638 protein-coding 625990943 LOC116901501 cytochrome b reductase 1 ENCODES a protein that exhibits identical protein binding (ortholog); oxidoreductase activity, acting on metal ions (ortholog); transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) 5 48408842 48433541 + 30032202 116901501 MODEL JAAIVD010000023;XM_032903470 XP_032759361 protein-coding 625990951 LOC116897581 small nucleolar RNA SNORA17 3 54654334 54654438 - 116897581 MODEL JAAIVD010000012 pseudo 625990952 Aatk apoptosis associated tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); brain development (ortholog); neuron apoptotic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 63967984 64006970 + 22301074;30032202 116909784 MODEL JAAIVD010000002;XM_032913475;XM_032913476 XP_032769366;XP_032769367 serine/threonine-protein kinase LMTK1 protein-coding 625990973 LOC116906105 T-complex protein 1 subunit zeta-like 7 76115398 76116959 + 116906105 MODEL JAAIVD010000026 pseudo 625990974 LOC116903023 cyclin-dependent kinase 4-like 6 155516878 155517721 - 116903023 MODEL JAAIVD010000024 pseudo 625990975 LOC116886539 40S ribosomal protein S10-like 17 16633125 16633544 + 30032202 116886539 MODEL JAAIVD010000011;XM_032888060 XP_032743951 protein-coding 625990978 Csf1 colony stimulating factor 1 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); amyloidosis (ortholog); FOUND IN CSF1-CSF1R complex (ortholog); extracellular region (ortholog); extracellular space (ortholog) 3 50506454 50525680 + 22301074;30032202 116896385 MODEL JAAIVD010000012;XM_032897506;XM_032897507 XP_032753397;XP_032753398 macrophage colony-stimulating factor 1 protein-coding 625990993 LOC116889045 protein tyrosine phosphatase type IVA 1-like X 120505086 120505598 + 116889045 MODEL JAAIVD010000014 pseudo 625990994 Myadml2 myeloid associated differentiation marker like 2 FOUND IN cytoplasm (ortholog) 9 63374161 63376057 + 22301074 116910186 MODEL JAAIVD010000002;XM_032914052 XP_032769943 myeloid-associated differentiation marker-like protein 2 protein-coding 625990999 Xpo7 exportin 7 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore (ortholog); nucleus (ortholog) 12 53603264 53687317 + 22301074;30032202 116913973 MODEL JAAIVD010000007;XM_032918241;XM_032918242 XP_032774132;XP_032774133 exportin-7 protein-coding 625991037 LOC116906537 IQ domain-containing protein F6-like 8 97920968 97922066 + 30032202 116906537 MODEL JAAIVD010000027;XM_032909232 XP_032765123 protein-coding 625991042 Farsb phenylalanyl-tRNA synthetase subunit beta ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); protein heterotetramerization (ortholog); PARTICIPATES IN phenylketonuria pathway; tyrosinemia type II pathway; tyrosinemia type III pathway; ASSOCIATED WITH Aneurysm (ortholog); genetic disease (ortholog); INTERSTITIAL LUNG AND LIVER DISEASE (ortholog); FOUND IN phenylalanine-tRNA ligase complex (ortholog) 4 151634775 151698777 - 22301074;30032202 116899544 MODEL JAAIVD010000003;XM_032901435 XP_032757326 phenylalanine--tRNA ligase beta subunit protein-coding 625991063 Myo1c myosin IC ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); microfilament motor activity (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); positive regulation of actin filament polymerization (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Experimental Liver Cirrhosis (ortholog); Meniere's disease (ortholog); FOUND IN B-WICH complex (ortholog); basal plasma membrane (ortholog); brush border (ortholog) 9 94369902 94387021 + 22301074;30032202 116910116 MODEL JAAIVD010000002;XM_032913946 XP_032769837 unconventional myosin-Ic protein-coding 625991099 Phka1 phosphorylase kinase regulatory subunit alpha 1 INVOLVED IN positive regulation of glycogen catabolic process (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN phosphorylase kinase complex (ortholog) X 60482825 60608082 - 30032202 116888300 MODEL JAAIVD010000014;XM_032889572;XM_032889573;XM_032889574 XP_032745463;XP_032745464;XP_032745465 phosphorylase b kinase regulatory subunit alpha, skeletal muscle isoform protein-coding 625991139 Zbtb22 zinc finger and BTB domain containing 22 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 18 6924527 6928003 + 22301074;30032202 116887576 MODEL JAAIVD010000013;XM_032889199;XM_032889200;XM_032889201 XP_032745090;XP_032745091;XP_032745092 zinc finger and BTB domain-containing protein 22 protein-coding 625991151 Rffl ring finger and FYVE like domain containing E3 ubiquitin protein ligase ENCODES a protein that exhibits p53 binding (ortholog); protease binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); endosome membrane (ortholog) 9 87646166 87710475 + 30032202 116910050 MODEL JAAIVD010000002;XM_032913841;XM_032913842;XM_032913843;XM_032913845;XM_032913846;XM_032913847 XP_032769732;XP_032769733;XP_032769734;XP_032769736;XP_032769737;XP_032769738 E3 ubiquitin-protein ligase rififylin protein-coding 625991172 Cd79b CD79b molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); response to bacterium (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 6 (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) 9 72810492 72813639 + 22301074;30032202 116909371 MODEL JAAIVD010000002;XM_032912921 XP_032768812 B-cell antigen receptor complex-associated protein beta chain protein-coding 625991182 Dlx5 distal-less homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Birth Weight (ortholog); bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 6 131800429 131804677 + 22301074;30032202 116902976 MODEL JAAIVD010000024;XM_032905293;XM_032905294 XP_032761184;XP_032761185 homeobox protein DLX-5 protein-coding 625991195 LOC116894364 carcinoembryonic antigen-related cell adhesion molecule 3 2 155909839 155923570 - 30032202 116894364 MODEL JAAIVD010000001;XM_032896067;XM_032896068 XP_032751958;XP_032751959 pregnancy-specific glycoprotein 22 protein-coding 625991207 Pxk PX domain containing serine/threonine kinase like INVOLVED IN inflammatory response (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of ATP-dependent activity (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); systemic lupus erythematosus (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 78518130 78584401 + 22301074;30032202 116914034 MODEL JAAIVD010000007;XM_032918306;XM_032918307;XM_032918308;XM_032918309;XM_032918310;XM_032918312;XM_032918313;XM_032918314;XM_032918315 XP_032774197;XP_032774198;XP_032774199;XP_032774200;XP_032774201;XP_032774203;XP_032774204;XP_032774205;XP_032774206 PX domain-containing protein kinase-like protein protein-coding 625991252 LOC116883833 histone H3.3-like 14 40016828 40017221 - 116883833 MODEL JAAIVD010000009 pseudo 625991253 LOC116892494 60S ribosomal protein L38-like 2 170397292 170397519 - 22301074;30032202 116892494 MODEL JAAIVD010000001;XM_032894238 XP_032750129 protein-coding 625991258 LOC116894149 olfactory receptor 2AG1-like 2 104828573 104829523 - 22301074 116894149 MODEL JAAIVD010000001;XM_032895868 XP_032751759 protein-coding 625991261 LOC116902552 small nucleolar RNA SNORA48 5 11688892 11689028 - 116902552 MODEL JAAIVD010000023 pseudo 625991262 Cand2 cullin associated and neddylation dissociated 2 (putative) ENCODES a protein that exhibits TBP-class protein binding (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Familial Cerebral Cavernous Malformation (ortholog); Postoperative Atrial Fibrillation (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 6 30908461 30936811 - 22301074;30032202 116903377 MODEL JAAIVD010000024;XM_032905865 XP_032761756 cullin-associated NEDD8-dissociated protein 2 protein-coding 625991281 LOC116905887 disintegrin and metalloproteinase domain-containing protein 20-like 7 121397527 121400009 - 22301074;30032202 116905887 MODEL JAAIVD010000026;XM_032908875 XP_032764766 protein-coding 625991286 Kif16b kinesin family member 16B ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); early endosome to late endosome transport (ortholog); endoderm development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); muscular atrophy (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) 5 122112447 122402801 - 22301074 116902032 MODEL JAAIVD010000023;XM_032904314;XM_032904315;XM_032904316 XP_032760205;XP_032760206;XP_032760207 kinesin-like protein KIF16B protein-coding 625991326 LOC116909557 cactin-like 9 73921233 73923895 + 22301074;30032202 116909557 MODEL JAAIVD010000002;XM_032913176 XP_032769067 protein-coding 625991331 LOC116885827 uncharacterized LOC116885827 16 13783032 13793996 - 116885827 MODEL JAAIVD010000004;XM_032887172 XP_032743063 uncharacterized protein LOC116885827 protein-coding 625991338 Usp21 ubiquitin specific peptidase 21 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type peptidase activity (ortholog); deNEDDylase activity (ortholog); INVOLVED IN neuron projection development (ortholog); protein deubiquitination (ortholog); rescue of stalled ribosome (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 10 50446842 50452861 - 22301074;30032202 116911148 MODEL JAAIVD010000005;XM_032915000;XM_032915001;XM_032915003 XP_032770891;XP_032770892;XP_032770894 ubiquitin carboxyl-terminal hydrolase 21 protein-coding 625991362 LOC116886281 60S ribosomal protein L23a-like 17 25658974 25659496 - 116886281 MODEL JAAIVD010000011 pseudo 625991363 LOC116893805 uncharacterized LOC116893805 2 44247643 44249213 + 116893805 MODEL JAAIVD010000001;XR_004387006 ncrna 625991368 LOC116893119 uncharacterized LOC116893119 2 71787531 71804232 + 116893119 MODEL JAAIVD010000001;XM_032895057 XP_032750948 uncharacterized protein LOC116893119 protein-coding 625991376 Sart3 spliceosome associated factor 3, U4/U6 recycling protein ENCODES a protein that exhibits histone binding (ortholog); protein-macromolecule adaptor activity (ortholog); U4 snRNA binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); hematopoietic stem cell proliferation (ortholog); homeostasis of number of cells (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Porokeratosis 3, Multiple Types (ortholog); FOUND IN Cajal body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 40204239 40232364 + 22301074 116885409 MODEL JAAIVD010000004;XM_032886695 XP_032742586 squamous cell carcinoma antigen recognized by T-cells 3 protein-coding 625991399 LOC116910715 U1 spliceosomal RNA 9 37267746 37267906 + 116910715 MODEL JAAIVD010000002;XR_004389242 snrna 625991402 LOC116907087 histone H2AX ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular senescence (ortholog); cerebral cortex development (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Chromosome Breakage (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) 8 38891881 38893259 + 22301074;30032202 116907087 MODEL JAAIVD010000027;XM_032910052 XP_032765943 protein-coding 625991407 LOC116886799 small nucleolar RNA SNORA72 17 41358790 41358912 + 116886799 MODEL JAAIVD010000011 pseudo 625991408 LOC116884808 60S ribosomal protein L30-like 15 23782035 23782372 - 116884808 MODEL JAAIVD010000010 pseudo 625991409 LOC116908179 voltage-dependent anion-selective channel protein 2-like 8 51086768 51104047 - 116908179 MODEL JAAIVD010000027 pseudo 625991410 Smim32 small integral membrane protein 32 14 81327326 81328311 + 116883648 MODEL JAAIVD010000009;XM_032884842 XP_032740733 protein-coding 625991415 LOC116910755 small nucleolar RNA U3 9 83314939 83315153 - 116910755 MODEL JAAIVD010000002;XR_004389266 snorna 625991418 Usp7 ubiquitin specific peptidase 7 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to nutrient levels (ortholog); DNA alkylation repair (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Hao-Fountain Syndrome (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 9 13297811 13341813 + 22301074;30032202 116910520 MODEL JAAIVD010000002;XM_032914424;XM_032914425 XP_032770315;XP_032770316 ubiquitin carboxyl-terminal hydrolase 7 protein-coding 625991459 Ccdc81 coiled-coil domain containing 81 FOUND IN centrosome (ortholog); ciliary basal body (ortholog); plasma membrane (ortholog) 2 111287027 111329351 + 30032202 116891859 MODEL JAAIVD010000001;XM_032893256;XM_032893257 XP_032749147;XP_032749148 coiled-coil domain-containing protein 81 protein-coding 625991482 Slc10a7 solute carrier family 10 member 7 INVOLVED IN bone development (ortholog); heparin proteoglycan biosynthetic process (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 17 21362765 21590092 - 30032202 116886076 MODEL JAAIVD010000011;XM_032887391 XP_032743282 sodium/bile acid cotransporter 7 protein-coding 625991498 Sf3b2 splicing factor 3b subunit 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); Goldenhar syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 2369959 2389970 + 22301074;30032202 116890731 MODEL JAAIVD010000001;XM_032891186;XM_032891187 XP_032747077;XP_032747078 protein-coding 625991526 Prss12 serine protease 12 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN exocytosis (ortholog); proteolysis (ortholog); zymogen activation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 1 (ortholog); intellectual disability (ortholog); long QT syndrome (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); dendrite (ortholog) 3 36295245 36355698 - 22301074;30032202 116896288 MODEL JAAIVD010000012;XM_032897370 XP_032753261 neurotrypsin protein-coding 625991541 Mospd3 motile sperm domain containing 3 INVOLVED IN heart development (ortholog); ASSOCIATED WITH congenital heart disease (ortholog) 16 16422439 16426026 + 30032202 116885769 MODEL JAAIVD010000004;XM_032887085 XP_032742976 motile sperm domain-containing protein 3 protein-coding 625991550 Phactr3 phosphatase and actin regulator 3 ENCODES a protein that exhibits actin binding (ortholog); FOUND IN nucleoplasm (ortholog) 5 155209196 155405593 + 30032202 116902392 MODEL JAAIVD010000023;XM_032904910 XP_032760801 protein-coding 625991567 Drp2 dystrophin related protein 2 INVOLVED IN synapse organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) X 86731492 86781307 + 22301074;30032202 116888503 MODEL JAAIVD010000014;XM_032889794 XP_032745685 dystrophin-related protein 2 protein-coding 625991595 LOC116910867 olfactory receptor 6C3-like 1 161717053 161717998 + 22301074;30032202 116910867 MODEL JAAIVD010000025;XM_032914661 XP_032770552 protein-coding 625991598 Skic3 SKI3 subunit of superkiller complex INVOLVED IN nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); rescue of stalled ribosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary immunodeficiency disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) 3 220962870 221071477 - 22301074;30032202 116897358 MODEL JAAIVD010000012;XM_032899117 XP_032755008 Ttc37 tetratricopeptide repeat domain 37;tetratricopeptide repeat protein 37 protein-coding 625991646 LOC116884616 60S ribosomal protein L3-like 15 23337153 23338345 - 116884616 MODEL JAAIVD010000010 pseudo 625991647 LOC116911077 complement component receptor 1-like protein 10 73019750 73050357 - 30032202 116911077 MODEL JAAIVD010000005;XM_032914859;XM_032914860;XM_032914861 XP_032770750;XP_032770751;XP_032770752 protein-coding 625991663 Mysm1 Myb like, SWIRM and MPN domains 1 ENCODES a protein that exhibits histone binding (ortholog); histone H2A deubiquitinase activity (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); pigmentation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Bone Marrow Failure Syndrome 4 (ortholog); diabetic retinopathy (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 57931378 57963909 - 22301074;30032202 116900082 MODEL JAAIVD010000025;XM_032901868 XP_032757759 histone H2A deubiquitinase MYSM1 protein-coding 625991687 Zc3h12b zinc finger CCCH-type containing 12B X 54824466 54859624 + 22301074;30032202 116888734 MODEL JAAIVD010000014;XM_032890025 XP_032745916 probable ribonuclease ZC3H12B protein-coding 625991696 LOC116895317 actin-related protein 10-like 3 26853185 26854418 + 116895317 MODEL JAAIVD010000012 pseudo 625991697 Cfap97d1 CFAP97 domain containing 1 INVOLVED IN sperm axoneme assembly (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 61277249 61282405 + 30032202 116910591 MODEL JAAIVD010000002;XM_032914514;XM_032914515 XP_032770405;XP_032770406 uncharacterized protein CFAP97D1 protein-coding 625991710 LOC116884546 cytochrome c oxidase subunit 6B1-like 15 8624858 8625435 + 22301074;30032202 116884546 MODEL JAAIVD010000010;XM_032885684 XP_032741575 protein-coding 625991716 LOC116913445 60S ribosomal protein L12-like 12 75474366 75474985 + 22301074;30032202 116913445 MODEL JAAIVD010000007;XM_032917646 XP_032773537 protein-coding 625991721 LOC116887694 uncharacterized LOC116887694 18 23941228 23947653 - 116887694 MODEL JAAIVD010000013;XR_004386231 ncrna 625991726 Lst1 leukocyte specific transcript 1 INVOLVED IN dendrite development (ortholog); negative regulation of lymphocyte proliferation (ortholog); ASSOCIATED WITH graft-versus-host disease (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 18 7782302 7786360 - 22301074;30032202 116887128 MODEL JAAIVD010000013;XM_032888675;XM_032888676 XP_032744566;XP_032744567 leukocyte-specific transcript 1 protein protein-coding 625991739 Utp6 UTP6 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) 9 90476937 90507166 + 22301074;30032202 116909312 MODEL JAAIVD010000002;XM_032912851 XP_032768742 U3 small nucleolar RNA-associated protein 6 homolog protein-coding 625991762 Tlr10 toll like receptor 10 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH asthma (ortholog); FOUND IN receptor complex (ortholog) 11 21918497 21932119 - 22301074;30032202 116912439 MODEL JAAIVD010000006;XM_032916508 XP_032772399 toll-like receptor 10 protein-coding 625991768 Vsig2 V-set and immunoglobulin domain containing 2 8 33705510 33710799 + 116906977 MODEL JAAIVD010000027;XM_032909898 XP_032765789 V-set and immunoglobulin domain-containing protein 2 protein-coding 625991779 Xcr1 X-C motif chemokine receptor 1 INVOLVED IN chemotaxis (ortholog); release of sequestered calcium ion into cytosol (ortholog); response to cytokine (ortholog) 8 114959459 114967098 - 22301074;30032202 116908283 MODEL JAAIVD010000027;XM_032911543 XP_032767434 chemokine XC receptor 1 protein-coding 625991785 Ormdl1 ORMDL sphingolipid biosynthesis regulator 1 INVOLVED IN ceramide metabolic process (ortholog); motor behavior (ortholog); myelination (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 4 121972433 121982824 - 22301074;30032202 116899362 MODEL JAAIVD010000003;XM_032901073 XP_032756964 ORM1-like protein 1 protein-coding 625991793 LOC116908454 U5 spliceosomal RNA 8 59506907 59507022 - 116908454 MODEL JAAIVD010000027;XR_004388972 snrna 625991796 LOC116906474 small nucleolar RNA SNORA17 7 46871839 46871957 + 116906474 MODEL JAAIVD010000026 pseudo 625991797 Phactr4 phosphatase and actin regulator 4 ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); closure of optic fissure (ortholog); enteric nervous system development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN lamellipodium (ortholog) 1 25816016 25897116 + 30032202 116891755 MODEL JAAIVD010000025;XM_032893465 XP_032749356 protein-coding 625991814 LOC116901062 histo-blood group ABO system transferase 2-like 5 142324292 142348199 - 22301074;30032202 116901062 MODEL JAAIVD010000023;XM_032902635 XP_032758526 protein-coding 625991824 LOC116902870 olfactory receptor-like protein OLF3 6 98387707 98388660 + 22301074 116902870 MODEL JAAIVD010000024;XM_032905200 XP_032761091 protein-coding 625991827 LOC116903205 C-type lectin domain family 2 member D11-like 6 18684486 18693192 - 30032202 116903205 MODEL JAAIVD010000024;XM_032905582 XP_032761473 protein-coding 625991836 LOC116908177 60S ribosomal protein L17-like 8 50084865 50094479 + 116908177 MODEL JAAIVD010000027 pseudo 625991837 Arhgap33 Rho GTPase activating protein 33 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); response to toxic substance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); disease of mental health (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cytoplasm (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 2 165473729 165487124 + 22301074;30032202 116892314 MODEL JAAIVD010000001;XM_032893938 XP_032749829 rho GTPase-activating protein 33 protein-coding 625991863 Gabpb1 GA binding protein transcription factor subunit beta 1 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN mitochondrion organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 105464951 105508108 - 22301074;30032202 116901918 MODEL JAAIVD010000023;XM_032904134;XM_032904135;XM_032904136;XM_032904137;XM_032904139 XP_032760025;XP_032760026;XP_032760027;XP_032760028;XP_032760030 GA-binding protein subunit beta-1 protein-coding 625991888 LOC116905710 fructose-bisphosphate aldolase A-like 7 68795258 68796946 + 22301074;30032202 116905710 MODEL JAAIVD010000026;XM_032908682 XP_032764573 protein-coding 625991893 LOC116898461 collagen alpha-1(XIX) chain-like 4 101831484 101924482 - 116898461 MODEL JAAIVD010000003;XM_032899718 XP_032755609 protein-coding 625991905 LOC116895879 eukaryotic translation initiation factor 1-like 3 108059284 108114242 - 22301074;30032202 116895879 MODEL JAAIVD010000012;XM_032896976 XP_032752867 protein-coding 625991910 LOC116890010 pescadillo homolog 1 189188113 189189677 - 116890010 MODEL JAAIVD010000025 pseudo 625991911 LOC116889124 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 1-like X 19969834 20021873 - 22301074;30032202 116889124 MODEL JAAIVD010000014;XM_032890296 XP_032746187 protein-coding 625991931 LOC116900577 olfactory receptor 4F3/4F16/4F29-like 5 90364135 90365082 - 22301074 116900577 MODEL JAAIVD010000023;XM_032902300 XP_032758191 protein-coding 625991935 LOC116889348 40S ribosomal protein S15-like X 100901508 100901925 - 116889348 MODEL JAAIVD010000014 pseudo 625991936 Tyrp1 tyrosinase related protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); tyrosinase activity (ortholog); INVOLVED IN acetoacetic acid metabolic process (ortholog); melanin metabolic process (ortholog); melanocyte differentiation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); genetic disease (ortholog); Lung Neoplasms (ortholog); FOUND IN clathrin-coated endocytic vesicle membrane (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 1 72739432 72757813 - 22301074;30032202 116888167 MODEL JAAIVD010000025;XM_032889493 XP_032745384 5,6-dihydroxyindole-2-carboxylic acid oxidase protein-coding 625991948 LOC116888173 cancer/testis antigen 55-like X 117067399 117077452 - 116888173 MODEL JAAIVD010000014;XM_032889494 XP_032745385 protein-coding 625991956 LOC116911989 ribosome biogenesis regulatory protein homolog 11 48466482 48468140 + 116911989 MODEL JAAIVD010000006 pseudo 625991957 Isg20 interferon stimulated exonuclease gene 20 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); exonuclease activity (ortholog); single-stranded DNA 3'-5' DNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA catabolic process (ortholog); negative regulation of viral genome replication (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 2 121332660 121347642 - 22301074;30032202 116891952 MODEL JAAIVD010000001;XM_032893392;XM_032893393 XP_032749283;XP_032749284 interferon-stimulated gene 20 kDa protein protein-coding 625991968 LOC116912726 C-X-C motif chemokine 2 11 4327655 4329696 + 22301074;30032202 116912726 MODEL JAAIVD010000006;XM_032916858 XP_032772749 protein-coding 625991976 LOC116883864 ribosome biogenesis protein NSA2 homolog 14 24335865 24336645 - 116883864 MODEL JAAIVD010000009 pseudo 625991977 Plekhs1 pleckstrin homology domain containing S1 ASSOCIATED WITH disease of cellular proliferation (ortholog); glucose intolerance (ortholog); Insulin Resistance (ortholog) 2 59680700 59706155 - 116893844 MODEL JAAIVD010000001;XM_032895562;XM_032895563 XP_032751453;XP_032751454 pleckstrin homology domain-containing family S member 1 protein-coding 625991995 Ripk4 receptor interacting serine/threonine kinase 4 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN morphogenesis of an epithelium (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH Bartsocas-Papas Syndrome 1 (ortholog); Curly Hair-Ankyloblepharon-Nail Dysplasia Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 4 46765047 46787496 + 22301074;30032202 116898935 MODEL JAAIVD010000003;XM_032900350 XP_032756241 receptor-interacting serine/threonine-protein kinase 4 protein-coding 625992007 LOC116895887 myoneurin-like 3 113130828 113139984 - 116895887 MODEL JAAIVD010000012 pseudo 625992008 LOC116887410 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8572737 8648768 - 22301074;30032202 116887410 MODEL JAAIVD010000013;XM_032889018;XM_032889019;XM_032889020;XM_032889021;XM_032889022;XM_032889023 XP_032744909;XP_032744910;XP_032744911;XP_032744912;XP_032744913;XP_032744914 protein-coding 625992033 LOC116892480 uncharacterized LOC116892480 2 169956455 169958228 + 116892480 MODEL JAAIVD010000001;XR_004386951 ncrna 625992038 Trank1 tetratricopeptide repeat and ankyrin repeat containing 1 ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog) 8 102287730 102364191 + 22301074 116907721 MODEL JAAIVD010000027;XM_032910845;XM_032910846;XM_032910847;XM_032910849 XP_032766736;XP_032766737;XP_032766738;XP_032766740 TPR and ankyrin repeat-containing protein 1 protein-coding 625992070 LOC116909844 carbonyl reductase [NADPH] 2 9 63286764 63288819 + 30032202 116909844 MODEL JAAIVD010000002;XM_032913570 XP_032769461 protein-coding 625992082 LOC116892723 60S ribosomal protein L14-like 1 12127209 12127907 + 22301074;30032202 116892723 MODEL JAAIVD010000025;XM_032894598 XP_032750489 protein-coding 625992086 Pcsk6 proprotein convertase subtilisin/kexin type 6 ENCODES a protein that exhibits endopeptidase activity (ortholog); heparin binding (ortholog); nerve growth factor binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); glycoprotein metabolic process (ortholog); nerve growth factor production (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 2 134308120 134496772 - 22301074;30032202 116891999 MODEL JAAIVD010000001;XM_032893453 XP_032749344 protein-coding 625992111 LOC116903880 60S ribosomal protein L7-like 6 24176769 24177316 - 116903880 MODEL JAAIVD010000024 pseudo 625992112 Dusp28 dual specificity phosphatase 28 ENCODES a protein that exhibits phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog) 4 164867079 164868762 + 22301074;30032202 116899650 MODEL JAAIVD010000003;XM_032901659 XP_032757550 protein-coding 625992118 LOC116893635 uncharacterized LOC116893635 2 9510365 9512178 + 116893635 MODEL JAAIVD010000001;XR_004387000 ncrna 625992122 Mex3b mex-3 RNA binding family member B ENCODES a protein that exhibits GTPase activating protein binding (ortholog); RNA binding (ortholog); INVOLVED IN establishment of localization in cell (ortholog); positive regulation of cell-cell adhesion (ortholog); positive regulation of phagocytosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); P-body (ortholog) 2 117392183 117396455 - 22301074;30032202 116891887 MODEL JAAIVD010000001;XM_032893297 XP_032749188 RNA-binding protein MEX3B protein-coding 625992128 LOC116883519 histone H2A type 1-B 14 41895804 41896217 + 22301074;30032202 116883519 MODEL JAAIVD010000009;XM_032884692 XP_032740583 protein-coding 625992133 LOC116896247 zinc finger protein 724-like 3 28253792 28271901 - 30032202 116896247 MODEL JAAIVD010000012;XM_032897316;XM_032897317;XM_032897318 XP_032753207;XP_032753208;XP_032753209 zinc finger protein OZF-like protein-coding 625992145 LOC116893482 DNA excision repair protein ERCC-6-like 2 2 180804558 180805256 + 116893482 MODEL JAAIVD010000001 pseudo 625992146 Tmem123 transmembrane protein 123 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog) 8 3974293 4002594 + 30032202 116906989 MODEL JAAIVD010000027;XM_032909915 XP_032765806 porimin protein-coding 625992155 Dcps decapping enzyme, scavenger ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); identical protein binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA methylguanosine-cap decapping (ortholog); ASSOCIATED WITH Al-Raqad Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 8 30668290 30727678 - 22301074;30032202 116906768 MODEL JAAIVD010000027;XM_032909611 XP_032765502 m7GpppX diphosphatase protein-coding 625992165 Stat5b signal transducer and activator of transcription 5B ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acute-phase response (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN erythropoietin signaling pathway; fibroblast growth factor signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); colon adenocarcinoma (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 60070479 60141642 - 30032202 116908850 MODEL JAAIVD010000002;XM_032912290 XP_032768181 protein-coding 625992188 LOC116913132 spliceosome-associated protein CWC15 homolog 1 176354114 176445253 + 116913132 MODEL JAAIVD010000025 pseudo 625992189 Pex12 peroxisomal biogenesis factor 12 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); ubiquitin protein ligase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); peroxisome organization (ortholog); pexophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 9 87384582 87388236 + 22301074;30032202 116909237 MODEL JAAIVD010000002;XM_032912743 XP_032768634 peroxisome assembly protein 12 protein-coding 625992197 Mtch2 mitochondrial carrier 2 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN cellular response to radiation (ortholog); establishment of protein localization to mitochondrial membrane involved in mitochondrial fission (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); obesity (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 65022947 65042253 + 30032202 116901600 MODEL JAAIVD010000023;XM_032903626 XP_032759517 mitochondrial carrier homolog 2 protein-coding 625992214 Vps50 VPS50 subunit of EARP/GARPII complex ENCODES a protein that exhibits SNARE binding (ortholog); INVOLVED IN endocytic recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND NEONATAL CHOLESTASIS (ortholog); FOUND IN EARP complex (ortholog); membrane (ortholog); perinuclear region of cytoplasm (ortholog) 6 135011654 135114947 - 30032202 116904106 MODEL JAAIVD010000024;XM_032906978;XM_032906979;XM_032906980 XP_032762869;XP_032762870;XP_032762871 syndetin protein-coding 625992252 Cmtm1 CKLF like MARVEL transmembrane domain containing 1 17 12593246 12602075 + 22301074 116886548 MODEL JAAIVD010000011;XM_032888066 XP_032743957 CKLF-like MARVEL transmembrane domain-containing protein 1 protein-coding 625992259 Avpr2 arginine vasopressin receptor 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); vasopressin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of urine volume (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH cardiomyopathy (ortholog); congenital adrenal hyperplasia (ortholog); congestive heart failure (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); perinuclear region of cytoplasm (ortholog) X 128686981 128688637 - 1534150;22301074;30032202 116888660 MODEL JAAIVD010000014;XM_032889952;Z11932 CAA77989;XP_032745843 vasopressin V2 receptor protein-coding 625992264 Sox15 SRY-box transcription factor 15 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell differentiation (ortholog); myoblast development (ortholog); negative regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 9 49267026 49268278 + 30032202 116909698 MODEL JAAIVD010000002;XM_032913363 XP_032769254 protein SOX-15 protein-coding 625992268 Scnn1a sodium channel epithelial 1 subunit alpha ENCODES a protein that exhibits actin binding (ortholog); ligand-gated sodium channel activity (ortholog); sodium channel activity (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to aldosterone (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive pseudohypoaldosteronism type 1 (ortholog); bronchiectasis 2 (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); ciliary membrane (ortholog) 6 22558549 22581702 - 22301074;30032202 116903250 MODEL JAAIVD010000024;XM_032905629 XP_032761520 amiloride-sensitive sodium channel subunit alpha protein-coding 625992284 LOC116893483 zinc finger protein 54-like 2 180848458 180854201 + 116893483 MODEL JAAIVD010000001 pseudo 625992285 Vipas39 VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); collagen fibril organization (ortholog); collagen metabolic process (ortholog); ASSOCIATED WITH ARC syndrome (ortholog); arthrogryposis, renal dysfunction, and cholestasis 1 (ortholog); arthrogryposis, renal dysfunction, and cholestasis 2 (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) 7 101339638 101363124 - 22301074;30032202 116905321 MODEL JAAIVD010000026;XM_032908213 XP_032764104 spermatogenesis-defective protein 39 homolog protein-coding 625992309 LOC116915182 small nucleolar RNA SNORA74 13 7879984 7880178 - 116915182 MODEL JAAIVD010000008;XR_004389841 snorna 625992312 LOC116906796 olfactory receptor 8B3-like 8 32228969 32229904 + 22301074;30032202 116906796 MODEL JAAIVD010000027;XM_032909663 XP_032765554 protein-coding 625992316 LOC116884837 60S ribosomal protein L27a-like 15 16108538 16108991 - 22301074;30032202 116884837 MODEL JAAIVD010000010;XM_032886074 XP_032741965 protein-coding 625992320 Kdm5a lysine demethylase 5A ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); facultative heterochromatin formation (ortholog); male gonad development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); ankylosing spondylitis (ortholog); breast cancer (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog) 6 26314638 26391407 - 22301074;30032202 116903331 MODEL JAAIVD010000024;XM_032905777 XP_032761668 lysine-specific demethylase 5A protein-coding 625992352 Spock1 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 ENCODES a protein that exhibits calcium ion binding (ortholog); cysteine-type endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); negative regulation of cell-substrate adhesion (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); microcephaly (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); neuromuscular junction (ortholog) 14 80207983 80681222 + 22301074 116883279 MODEL JAAIVD010000009;XM_032884269;XM_032884270 XP_032740160;XP_032740161 testican-1 protein-coding 625992371 LOC116910521 olfactory receptor 6C6-like 1 161661159 161663534 + 116910521 MODEL JAAIVD010000025 pseudo 625992372 Sf3a3 splicing factor 3a subunit 3 INVOLVED IN mRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 33566520 33586206 - 22301074;30032202 116896881 MODEL JAAIVD010000025;XM_032898430 XP_032754321 protein-coding 625992393 LOC116885240 60S ribosomal protein L27-like 16 29052827 29053289 + 22301074;30032202 116885240 MODEL JAAIVD010000004;XM_032886478 XP_032742369 protein-coding 625992398 Rnf6 ring finger protein 6 ENCODES a protein that exhibits DNA binding (ortholog); nuclear androgen receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); positive regulation of DNA-templated transcription (ortholog); protein K27-linked ubiquitination (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) 16 7588928 7598928 + 30032202 116885444 MODEL JAAIVD010000004;XM_032886727;XM_032886728;XM_032886729 XP_032742618;XP_032742619;XP_032742620 E3 ubiquitin-protein ligase RNF6 protein-coding 625992413 Coro6 coronin 6 ASSOCIATED WITH breast ductal carcinoma (ortholog); COVID-19 (ortholog); invasive ductal carcinoma (ortholog) 9 96133966 96141929 + 30032202 116908533 MODEL JAAIVD010000002;XM_032911717;XM_032911718;XM_032911719;XM_032911720;XM_032911721 XP_032767608;XP_032767609;XP_032767610;XP_032767611;XP_032767612 coronin-6 protein-coding 625992440 Dynlt5 dynein light chain Tctex-type family member 5 1 51571958 51592662 - 30032202 116899566 MODEL JAAIVD010000025;XM_032901473;XM_032901482 XP_032757364;XP_032757373 Tctex1d1 Tctex1 domain containing 1;dynein light chain Tctex-type 5;tctex1 domain-containing protein 1 protein-coding 625992452 Atg4b autophagy related 4B cysteine peptidase ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); endopeptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog) 4 165673101 165704342 + 22301074 116899671 MODEL JAAIVD010000003;XM_032901687 XP_032757578 cysteine protease ATG4B protein-coding 625992469 LOC116907072 uncharacterized LOC116907072 8 88171781 88177545 - 116907072 MODEL JAAIVD010000027;XR_004388801 ncrna 625992474 Wdr54 WD repeat domain 54 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); negative regulation of receptor internalization (ortholog); regulation of epidermal growth factor receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog); vesicle (ortholog) 6 63054273 63073981 + 22301074;30032202 116903619 MODEL JAAIVD010000024;XM_032906270;XM_032906271;XM_032906272;XM_032906273 XP_032762161;XP_032762162;XP_032762163;XP_032762164 WD repeat-containing protein 54 protein-coding 625992497 LOC116888803 high mobility group protein B4-like X 111585688 111586222 - 116888803 MODEL JAAIVD010000014 pseudo 625992498 Pfn3 profilin 3 14 73735889 73736624 - 22301074;30032202 116883793 MODEL JAAIVD010000009;XM_032885040 XP_032740931 profilin-3 protein-coding 625992503 LOC116889404 isopentenyl-diphosphate Delta-isomerase 1-like 1 136177539 136178252 - 116889404 MODEL JAAIVD010000025 pseudo 625992504 Sostdc1 sclerostin domain containing 1 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN epithelial cell fate commitment (ortholog); hair follicle morphogenesis (ortholog); mammary gland bud morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; Wnt signaling, canonical pathway; FOUND IN extracellular space (ortholog) 7 50230035 50234336 - 22301074;30032202 116905680 MODEL JAAIVD010000026;XM_032908664 XP_032764555 sclerostin domain-containing protein 1 protein-coding 625992510 LOC116893667 olfactory receptor 10V1 2 11987705 11988634 + 22301074 116893667 MODEL JAAIVD010000001;XM_032895382 XP_032751273 protein-coding 625992513 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50261093 50261164 + 116911905 MODEL JAAIVD010000005 trna 625992514 Fer FER tyrosine kinase ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); lipid binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction assembly (ortholog); adherens junction disassembly (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Duane retraction syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cell junction (ortholog) 4 173988298 174240354 + 22301074;2485255;30032202 116899691 MODEL JAAIVD010000003;X13412;XM_032901714 CAA31778;XP_032757605 flk protein;tyrosine-protein kinase Fer protein-coding 625992536 Brd2 bromodomain containing 2 ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); histone H3K14ac reader activity (ortholog); histone H4K12ac reader activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); chromatin looping (ortholog); neural tube closure (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); glioblastoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 18 8200198 8208944 + 30032202 116887404 MODEL JAAIVD010000013;XM_032888997;XM_032888998 XP_032744888;XP_032744889 bromodomain-containing protein 2 protein-coding 625992557 LOC116887097 keratin-associated protein 10-3-like 18 1090049 1090891 - 22301074;30032202 116887097 MODEL JAAIVD010000013;XM_032888616;XM_032888617;XM_032888618;XM_032888619 XP_032744507;XP_032744508;XP_032744509;XP_032744510 keratin-associated protein 10-8-like protein-coding 625992568 LOC116886797 U6 spliceosomal RNA 17 14472245 14472342 - 116886797 MODEL JAAIVD010000011 pseudo 625992569 LOC116892583 carcinoembryonic antigen-related cell adhesion molecule 15-like 2 172394495 172398656 + 30032202 116892583 MODEL JAAIVD010000001;XM_032894364 XP_032750255 protein-coding 625992576 LOC116898080 heterogeneous nuclear ribonucleoprotein D-like 4 92247457 92248491 + 116898080 MODEL JAAIVD010000003 pseudo 625992577 LOC116905377 alpha-1-antiproteinase 7 114999802 115011879 - 30032202 116905377 MODEL JAAIVD010000026;XM_032908315 XP_032764206 protein-coding 625992586 Atf1 activating transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); positive regulation of DNA replication (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH polycystic kidney disease (ortholog); polycystic ovary syndrome (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 262807087 262849601 - 30032202 116884072 MODEL JAAIVD010000025;XM_032885316;XM_032885317;XM_032885318 XP_032741207;XP_032741208;XP_032741209 cyclic AMP-dependent transcription factor ATF-1 protein-coding 625992602 Tm9sf2 transmembrane 9 superfamily member 2 INVOLVED IN ceramide metabolic process (ortholog); glycosphingolipid biosynthetic process (ortholog); regulation of heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN Golgi apparatus (ortholog) 12 2728754 2780234 - 22301074;30032202 116914085 MODEL JAAIVD010000007;XM_032918391 XP_032774282 protein-coding 625992623 Fsd1l fibronectin type III and SPRY domain containing 1 like ASSOCIATED WITH hydrocephalus (ortholog) 1 97405706 97469140 + 22301074 116901804 MODEL JAAIVD010000025;XM_032903966 XP_032759857 FSD1-like protein protein-coding 625992641 LOC116899981 60S acidic ribosomal protein P2-like 5 134696971 134704692 - 116899981 MODEL JAAIVD010000023 pseudo 625992642 LOC116895065 small nucleolar RNA SNORA17 2 144183539 144183662 + 116895065 MODEL JAAIVD010000001 pseudo 625992643 Gps1 G protein pathway suppressor 1 INVOLVED IN protein deneddylation (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 63243737 63248675 - 30032202 116909835 MODEL JAAIVD010000002;XM_032913551;XM_032913552;XM_032913553;XM_032913554;XM_032913555 XP_032769442;XP_032769443;XP_032769444;XP_032769445;XP_032769446 COP9 signalosome complex subunit 1 protein-coding 625992677 Sord sorbitol dehydrogenase ENCODES a protein that exhibits D-xylulose reductase activity (ortholog); identical protein binding (ortholog); L-iditol 2-dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucuronate catabolic process to D-xylulose 5-phosphate (ortholog); flagellated sperm motility (ortholog); fructose biosynthetic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 8 (ortholog); cataract (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); membrane (ortholog) 5 100342909 100374271 + 22301074;30032202 116901884 MODEL JAAIVD010000023;XM_032904091 XP_032759982 protein-coding 625992690 Hdgf heparin binding growth factor ENCODES a protein that exhibits actin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); heparin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); negative regulation of neuron apoptotic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 3 65645637 65655107 - 30032202 116896712 MODEL JAAIVD010000012;XM_032898130;XM_032898131 XP_032754021;XP_032754022 hepatoma-derived growth factor protein-coding 625992703 LOC116885818 uncharacterized LOC116885818 16 40836108 40837079 - 116885818 MODEL JAAIVD010000004;XR_004386045 ncrna 625992707 LOC116890292 5S ribosomal RNA 1 255906462 255906580 - 116890292 MODEL JAAIVD010000025;XR_004386533 rrna 625992710 LOC116908180 taste receptor cell protein 1 8 51134440 51143397 + 116908180 MODEL JAAIVD010000027;XM_032911470 XP_032767361 taste receptor cell protein 1-like protein-coding 625992724 Scamp3 secretory carrier membrane protein 3 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN response to retinoic acid (ortholog); FOUND IN Golgi membrane (ortholog) 3 64493375 64499088 - 22301074;30032202 116896665 MODEL JAAIVD010000012;XM_032898022;XM_032898023;XM_032898024 XP_032753913;XP_032753914;XP_032753915 secretory carrier-associated membrane protein 3 protein-coding 625992743 Etv4 ETS variant transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in mammary gland duct morphogenesis (ortholog); motor neuron axon guidance (ortholog); negative regulation of mammary gland epithelial cell proliferation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Neoplasm Metastasis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleus (ortholog) 9 61059414 61074427 - 22301074;30032202 116909805 MODEL JAAIVD010000002;XM_032913499;XM_032913500 XP_032769390;XP_032769391 ETS translocation variant 4 protein-coding 625992766 Tusc2 tumor suppressor 2, mitochondrial calcium regulator INVOLVED IN cell maturation (ortholog); defense response to Gram-negative bacterium (ortholog); inflammatory response (ortholog); FOUND IN mitochondrion (ortholog) 8 98879718 98882900 + 30032202 116907528 MODEL JAAIVD010000027;XM_032910543 XP_032766434 tumor suppressor candidate 2 protein-coding 625992773 Slc25a38 solute carrier family 25 member 38 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); glycine import into mitochondrion (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); genetic disease (ortholog); sideroblastic anemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 111341064 111352709 + 22301074;30032202 116907935 MODEL JAAIVD010000027;XM_032911150;XM_032911151 XP_032767041;XP_032767042 mitochondrial glycine transporter protein-coding 625992787 Il25 interleukin 25 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response (ortholog); inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH allergic asthma (ortholog); Amoebic Dysentery due to Entamoeba Histolytica (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog) 12 70054838 70057889 - 22301074 116913221 MODEL JAAIVD010000007;XM_032917396 XP_032773287 interleukin-25 protein-coding 625992793 LOC116894243 olfactory receptor 14A2-like 2 114472809 114473816 + 22301074;30032202 116894243 MODEL JAAIVD010000001;XM_032895948 XP_032751839 protein-coding 625992796 C1H8orf82 chromosome 1 C8orf82 homolog FOUND IN mitochondrion (ortholog) 1 249049087 249051541 - 116913497 MODEL JAAIVD010000025;XM_032917703 XP_032773594 UPF0598 protein C8orf82 homolog protein-coding 625992803 LOC116907417 guanylate cyclase soluble subunit alpha-2-like 8 1622467 1639058 + 22301074;30032202 116907417 MODEL JAAIVD010000027;XM_032910378 XP_032766269 protein-coding 625992809 Gpr135 G protein-coupled receptor 135 ENCODES a protein that exhibits arrestin family protein binding (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 7 85738670 85741024 - 22301074;30032202 116905145 MODEL JAAIVD010000026;XM_032907913 XP_032763804 G-protein coupled receptor 135 protein-coding 625992814 LOC116893256 glyceraldehyde-3-phosphate dehydrogenase-like 2 132901740 132938533 + 116893256 MODEL JAAIVD010000001 pseudo 625992815 LOC116904245 S-adenosylmethionine synthase-like 6 158508611 158511386 - 22301074;30032202 116904245 MODEL JAAIVD010000024;XM_032907199 XP_032763090 protein-coding 625992820 Adcyap1 adenylate cyclase activating polypeptide 1 ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); pituitary adenylate cyclase activating polypeptide activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alcohol dependence (ortholog); Brain Injuries (ortholog); FOUND IN extracellular space (ortholog); neuronal dense core vesicle lumen (ortholog); terminal bouton (ortholog) 9 53896995 53904630 - 22301074;2268329;30032202;7835287 116909452 MODEL JAAIVD010000002;X80290;XM_032913029;XM_032913030;XM_032913031 CAA56564;XP_032768920;XP_032768921;XP_032768922 pituitary adenylate cyclase activating polypeptide;pituitary adenylate cyclase-activating polypeptide protein-coding 625992835 Banf1 barrier to autointegration nuclear assembly factor 1 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); chromatin organization (ortholog); DNA integration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Nestor-Guillermo progeria syndrome (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) 2 2307652 2309583 + 22301074 116890727 MODEL JAAIVD010000001;XM_032891180;XM_032891181;XM_032891183;XM_032891184 XP_032747071;XP_032747072;XP_032747074;XP_032747075 BAF nuclear assembly factor 1;barrier-to-autointegration factor protein-coding 625992851 Dgki diacylglycerol kinase iota ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); excitatory postsynaptic potential (ortholog); habituation (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 102586460 103027970 + 22301074;30032202 116903960 MODEL JAAIVD010000024;XM_032906748;XM_032906749;XM_032906750;XM_032906751;XM_032906752;XM_032906753;XM_032906754;XM_032906755 XP_032762639;XP_032762640;XP_032762641;XP_032762642;XP_032762643;XP_032762644;XP_032762645;XP_032762646 protein-coding 625992902 Mrgprf MAS related GPR family member F FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 4425857 4434966 - 22301074;30032202 116893604 MODEL JAAIVD010000001;XM_032895312 XP_032751203 mas-related G-protein coupled receptor member F protein-coding 625992909 LOC116890256 40S ribosomal protein S25-like 1 10840272 10840693 - 116890256 MODEL JAAIVD010000025 pseudo 625992910 Odc1 ornithine decarboxylase 1 ENCODES a protein that exhibits ornithine decarboxylase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN kidney development (ortholog); polyamine metabolic process (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN polyamine metabolic pathway; putrescine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH atrichia with papular lesions (ortholog); Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 7 37334589 37338924 + 30032202 116904903 MODEL JAAIVD010000026;XM_032907509 XP_032763400 ornithine decarboxylase protein-coding 625992924 Rnf41 ring finger protein 41 ENCODES a protein that exhibits erythropoietin receptor binding (ortholog); identical protein binding (ortholog); interleukin-3 receptor binding (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN endoplasmic reticulum tubular network (ortholog); perinuclear region of cytoplasm (ortholog) 1 155879892 155905657 + 22301074;30032202 116906067 MODEL JAAIVD010000025;XM_032909103 XP_032764994 E3 ubiquitin-protein ligase NRDP1 protein-coding 625992936 Tob2 transducer of ERBB2, 2 ENCODES a protein that exhibits nuclear vitamin D receptor binding (ortholog); INVOLVED IN negative regulation of osteoclast differentiation (ortholog); positive regulation of ossification (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH vitiligo (ortholog); FOUND IN cytosol (ortholog) 1 251585774 251596639 - 30032202 116914068 MODEL JAAIVD010000025;XM_032918377 XP_032774268 protein Tob2 protein-coding 625992942 LOC116909795 ankyrin repeat domain-containing protein 40-like 9 44186136 44188084 + 116909795 MODEL JAAIVD010000002;XR_004389098 pseudo 625992945 Krt8 keratin 8 ENCODES a protein that exhibits protein-containing complex binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN cell differentiation involved in embryonic placenta development (ortholog); extrinsic apoptotic signaling pathway (ortholog); hepatocyte apoptotic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); adenocarcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell periphery (ortholog); cell-cell junction (ortholog) 1 261074180 261081632 + 22301074 116883646 MODEL JAAIVD010000025;XM_032884840 XP_032740731 keratin, type II cytoskeletal 8 protein-coding 625992958 LOC116883908 UPF0488 protein C8orf33 homolog 14 388720 389269 - 116883908 MODEL JAAIVD010000009 pseudo 625992959 LOC116895681 nucleophosmin-like 3 200236298 200237175 + 116895681 MODEL JAAIVD010000012 pseudo 625992960 LOC116899906 small nucleolar RNA SNORD89 4 115790296 115790410 - 116899906 MODEL JAAIVD010000003;XR_004387878 snorna 625992963 Il18bp interleukin 18 binding protein ENCODES a protein that exhibits interleukin-18 binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to tumor necrosis factor (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog) 2 100299902 100301923 - 30032202 116891777 MODEL JAAIVD010000001;XM_032893118 XP_032749009 interleukin-18-binding protein protein-coding 625992972 Nog noggin ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); axial mesoderm development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Alzheimer's disease (ortholog); cleft lip (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) 9 81487916 81489883 + 22301074;30032202 116910134 MODEL JAAIVD010000002;XM_032913970 XP_032769861 protein-coding 625992977 LOC116887875 DDB1- and CUL4-associated factor 8-like X 48467406 48469785 - 22301074;30032202 116887875 MODEL JAAIVD010000014;XM_032889364 XP_032745255 protein-coding 625992981 LOC116888125 GTPase NRas-like X 103659646 103660573 - 116888125 MODEL JAAIVD010000014 pseudo 625992982 LOC116884896 39S ribosomal protein L15, mitochondrial-like 15 1054162 1055244 + 116884896 MODEL JAAIVD010000010 pseudo 625992983 LOC116888264 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like X 19130299 19132284 + 116888264 MODEL JAAIVD010000014 pseudo 625992984 LOC116887617 class I histocompatibility antigen, Gogo-B*0102 alpha chain-like 18 9945833 9965300 - 116887617 MODEL JAAIVD010000013 pseudo 625992985 Zc3h13 zinc finger CCCH-type containing 13 INVOLVED IN mRNA processing (ortholog); regulation of stem cell population maintenance (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); RNA N6-methyladenosine methyltransferase complex (ortholog) 12 49042645 49110374 - 22301074;30032202 116914092 MODEL JAAIVD010000007;XM_032918405;XM_032918406;XM_032918407 XP_032774296;XP_032774297;XP_032774298 zinc finger CCCH domain-containing protein 13 protein-coding 625993012 Lta lymphotoxin alpha INVOLVED IN defense response to Gram-positive bacterium (ortholog); humoral immune response (ortholog); lymph node development (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); allergic disease (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog) 18 7799640 7801663 - 22301074 116887539 MODEL JAAIVD010000013;XM_032889170 XP_032745061 lymphotoxin-alpha protein-coding 625993020 LOC116898578 60S ribosomal protein L36-like 4 164217126 164217443 - 22301074;30032202 116898578 MODEL JAAIVD010000003;XM_032899780 XP_032755671 protein-coding 625993023 LOC116912404 40S ribosomal protein S2-like 11 33934369 33934732 + 116912404 MODEL JAAIVD010000006 pseudo 625993024 Prpf38a pre-mRNA processing factor 38A INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); precatalytic spliceosome (ortholog) 1 46280647 46292272 + 30032202 116899102 MODEL JAAIVD010000025;XM_032900621 XP_032756512 pre-mRNA-splicing factor 38A protein-coding 625993038 Spring1 SREBF pathway regulator in golgi 1 INVOLVED IN positive regulation of SREBP signaling pathway (ortholog); FOUND IN Golgi membrane (ortholog) 16 35562882 35581478 - 22301074;30032202 116885513 MODEL JAAIVD010000004;XM_032886804 XP_032742695 C16H12orf49 UPF0454 protein C12orf49 homolog;chromosome 16 C12orf49 homolog protein-coding 625993047 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72221037 72221109 - 116914213 MODEL JAAIVD010000007 trna 625993048 LOC116894846 U6 spliceosomal RNA 2 147838542 147838648 + 116894846 MODEL JAAIVD010000001;XR_004387061 snrna 625993051 Cyld CYLD lysine 63 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Brooke-Spiegler syndrome (ortholog); Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis-8 (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 13964466 14052542 - 30032202 116897862 MODEL JAAIVD010000003;XM_032899269 XP_032755160 ubiquitin carboxyl-terminal hydrolase CYLD protein-coding 625993060 LOC116892838 uncharacterized LOC116892838 2 191680584 191687560 - 116892838 MODEL JAAIVD010000001;XR_004386974;XR_004386975;XR_004386976 ncrna 625993069 LOC116908480 cytochrome c oxidase assembly protein COX11, mitochondrial INVOLVED IN ATP biosynthetic process (ortholog); intracellular monoatomic cation homeostasis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); mitochondrial complex IV deficiency nuclear type 23 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 9 80196519 80201529 - 22301074;30032202 116908480 MODEL JAAIVD010000002;XM_032911633 XP_032767524 protein-coding 625993077 Tspan12 tetraspanin 12 ENCODES a protein that exhibits Wnt receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); maintenance of blood-brain barrier (ortholog); Norrin signaling pathway (ortholog); ASSOCIATED WITH Disease Susceptibility (ortholog); exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 5 (ortholog); FOUND IN plasma membrane (ortholog) 6 117306232 117373674 + 22301074;30032202 116904047 MODEL JAAIVD010000024;XM_032906907 XP_032762798 tetraspanin-12 protein-coding 625993089 Dnajc5 DnaJ heat shock protein family (Hsp40) member C5 ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); INVOLVED IN negative regulation of neuron apoptotic process (ortholog); protein folding (ortholog); regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); neuronal ceroid lipofuscinosis (ortholog); neuronal ceroid lipofuscinosis 4 (ortholog); FOUND IN neuromuscular junction (ortholog); plasma membrane (ortholog); presynapse (ortholog) 5 158606821 158642748 + 30032202 116902444 MODEL JAAIVD010000023;XM_032904994;XM_032904996;XM_032904997;XR_004388073;XR_004388074 XP_032760885;XP_032760887;XP_032760888 dnaJ homolog subfamily C member 5 protein-coding 625993111 LOC116886721 small nucleolar RNA MBII-202 17 42724578 42724663 + 116886721 MODEL JAAIVD010000011;XR_004386133 snorna 625993114 LOC116896473 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 2 3 58637063 58642933 - 22301074 116896473 MODEL JAAIVD010000012;XM_032897636 XP_032753527 protein-coding 625993122 Kbtbd12 kelch repeat and BTB domain containing 12 6 57715017 57778202 + 22301074 116902731 MODEL JAAIVD010000024;XM_032905081 XP_032760972 kelch repeat and BTB domain-containing protein 12 protein-coding 625993131 Itga3 integrin subunit alpha 3 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); dendritic spine maintenance (ortholog); exploration behavior (ortholog); PARTICIPATES IN altered Reelin signaling pathway; integrin mediated signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH bronchopulmonary dysplasia (ortholog); Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell periphery (ortholog); cell surface (ortholog) 9 59306864 59338939 + 22301074;30032202 116908764 MODEL JAAIVD010000002;XM_032912117 XP_032768008 integrin alpha-3 protein-coding 625993160 LOC116905867 constitutive coactivator of PPAR-gamma-like protein 1 7 13646071 13648515 - 30032202 116905867 MODEL JAAIVD010000026;XM_032908856 XP_032764747 protein-coding 625993165 C3H4orf46 chromosome 3 C4orf46 homolog FOUND IN cytosol (ortholog) 3 73776041 73778306 - 116896762 MODEL JAAIVD010000012;XM_032898211 XP_032754102 renal cancer differentiation gene 1 protein protein-coding 625993171 LOC116892954 60S ribosomal protein L19-like 2 211461559 211462131 - 116892954 MODEL JAAIVD010000001 pseudo 625993172 LOC116912470 uncharacterized LOC116912470 11 43757223 43757823 - 116912470 MODEL JAAIVD010000006;XR_004389461 ncrna 625993176 Rnf227 ring finger protein 227 9 48950167 48952057 + 30032202 116910011 MODEL JAAIVD010000002;XM_032913798 XP_032769689 protein-coding 625993182 Ilkap ILK associated serine/threonine phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); regulation of nuclear cell cycle DNA replication (ortholog); PARTICIPATES IN integrin mediated signaling pathway 4 163371810 163394008 - 22301074;30032202 116899637 MODEL JAAIVD010000003;XM_032901630;XM_032901631;XM_032901632 XP_032757521;XP_032757522;XP_032757523 integrin-linked kinase-associated serine/threonine phosphatase 2C protein-coding 625993204 LOC116892768 vomeronasal type-1 receptor 4-like 2 182494375 182495322 + 22301074;30032202 116892768 MODEL JAAIVD010000001;XM_032894646 XP_032750537 protein-coding 625993208 LOC116894588 cytochrome P450 2C11-like 2 180459752 180465006 - 22301074;30032202 116894588 MODEL JAAIVD010000001;XM_032896307 XP_032752198 protein-coding 625993215 LOC116901759 uncharacterized LOC116901759 5 92210594 92221673 + 116901759 MODEL JAAIVD010000023;XR_004388017;XR_004388018 ncrna 625993224 LOC116884101 U2 spliceosomal RNA 14 48878820 48878926 + 116884101 MODEL JAAIVD010000009 pseudo 625993225 LOC116895294 malate dehydrogenase, mitochondrial-like 1 77537136 77550856 + 116895294 MODEL JAAIVD010000025 pseudo 625993226 LOC116902613 U1 spliceosomal RNA 5 157156755 157157009 + 116902613 MODEL JAAIVD010000023 pseudo 625993227 Cdc25b cell division cycle 25B ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN female meiosis I (ortholog); oocyte maturation (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diastolic heart failure (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 5 110914218 110924414 + 22301074;30032202 116901987 MODEL JAAIVD010000023;XM_032904236;XM_032904237 XP_032760127;XP_032760128 M-phase inducer phosphatase 2 protein-coding 625993251 Chchd7 coiled-coil-helix-coiled-coil-helix domain containing 7 ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN mitochondrion (ortholog) 7 72770528 72775153 - 116905086 MODEL JAAIVD010000026;XM_032907804;XM_032907805;XR_004388484 XP_032763695;XP_032763696 coiled-coil-helix-coiled-coil-helix domain-containing protein 7 protein-coding 625993269 Ppp1r14d protein phosphatase 1 regulatory inhibitor subunit 14D ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog) 5 97393225 97407282 - 22301074;30032202 116901800 MODEL JAAIVD010000023;XM_032903958;XM_032903959 XP_032759849;XP_032759850 protein phosphatase 1 regulatory subunit 14D protein-coding 625993283 Foxi1 forkhead box I1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN inner ear morphogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 4 (ortholog); Craniofacial Abnormalities (ortholog); Hearing Loss (ortholog); FOUND IN nucleolus (ortholog) 9 7022360 7026413 - 30032202 116910109 MODEL JAAIVD010000002;XM_032913939;XM_032913940 XP_032769830;XP_032769831 forkhead box protein I1 protein-coding 625993292 LOC116909948 uncharacterized LOC116909948 9 87451283 87463560 - 116909948 MODEL JAAIVD010000002;XR_004389114 ncrna 625993298 Tnfsf8 TNF superfamily member 8 INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); defense response to Gram-positive bacterium (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog) 1 89736901 89759465 + 22301074;30032202 116888372 MODEL JAAIVD010000025;XM_032889652 XP_032745543 tumor necrosis factor ligand superfamily member 8 protein-coding 625993304 Fahd2a fumarylacetoacetate hydrolase domain containing 2A ENCODES a protein that exhibits oxaloacetate tautomerase activity (ortholog); INVOLVED IN oxaloacetate metabolic process (ortholog); FOUND IN mitochondrion (ortholog) 5 106221513 106229474 - 30032202 116901935 MODEL JAAIVD010000023;XM_032904162 XP_032760053 fumarylacetoacetate hydrolase domain-containing protein 2A protein-coding 625993316 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42434798 42434870 + 116884231 MODEL JAAIVD010000009 trna 625993317 LOC116908087 olfactory receptor 12-like 1 169003391 169004338 + 22301074;30032202 116908087 MODEL JAAIVD010000025;XM_032911371 XP_032767262 protein-coding 625993320 LOC116900389 olfactory receptor 5D18-like 5 69732767 69733721 - 116900389 MODEL JAAIVD010000023 pseudo 625993321 LOC116884400 trafficking protein particle complex subunit 6B-like 15 64846559 64851236 - 116884400 MODEL JAAIVD010000010 pseudo 625993322 Tpsg1 tryptase gamma 1 9 2634269 2638508 + 22301074 116908575 MODEL JAAIVD010000002;XM_032911787;XM_032911788;XM_032911789 XP_032767678;XP_032767679;XP_032767680 tryptase gamma protein-coding 625993340 P2ry13 purinergic receptor P2Y13 ENCODES a protein that exhibits G protein-coupled purinergic nucleotide receptor activity (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 95696569 95697836 + 22301074;30032202 116896841 MODEL JAAIVD010000012;XM_032898346 XP_032754237 P2Y purinoceptor 13 protein-coding 625993344 LOC116900427 olfactory receptor 4C15-like 5 70592327 70593905 - 22301074 116900427 MODEL JAAIVD010000023;XM_032902170 XP_032758061 protein-coding 625993348 LOC116901815 uncharacterized LOC116901815 5 97767733 97774516 + 116901815 MODEL JAAIVD010000023;XR_004388025 ncrna 625993352 Csnk2b casein kinase 2 beta ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); endothelial tube morphogenesis (ortholog); liver regeneration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; mitochondrial autophagy pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN cell projection (ortholog); chromatin (ortholog); cytoplasm (ortholog) 18 7716267 7720575 - 22301074;30032202 116887079 MODEL JAAIVD010000013;XM_032888589 XP_032744480 casein kinase II subunit beta protein-coding 625993363 LOC116913615 olfactory receptor 2T1 12 84125907 84126953 + 22301074 116913615 MODEL JAAIVD010000007;XM_032917867 XP_032773758 protein-coding 625993367 LOC116904499 60S ribosomal protein L7-like 6 158650602 158651467 + 116904499 MODEL JAAIVD010000024 pseudo 625993368 Ahdc1 AT-hook DNA binding motif containing 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); promoter-enhancer loop anchoring activity (ortholog); INVOLVED IN mesoderm formation (ortholog); skin morphogenesis (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); autism spectrum disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN nucleus (ortholog) 1 25159000 25223927 - 116895339 MODEL JAAIVD010000025;XM_032896644 XP_032752535 AT-hook DNA-binding motif-containing protein 1 protein-coding 625993379 Dag1 dystroglycan 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); dystroglycan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); axon regeneration (ortholog); basement membrane organization (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2P (ortholog); bronchopulmonary dysplasia (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) 8 99533799 99594412 - 22301074;30032202 116907572 MODEL HM141718;HM141719;HM141720;JAAIVD010000027;XM_032910604;XM_032910605;XM_032910606;XM_032910608 ADI96089;ADI96090;ADI96091;XP_032766495;XP_032766496;XP_032766497;XP_032766499 alpha-dystroglycan;dystroglycan protein-coding 625993393 Cfap45 cilia and flagella associated protein 45 ENCODES a protein that exhibits AMP binding (ortholog); INVOLVED IN cerebrospinal fluid circulation (ortholog); epithelial cilium movement involved in determination of left/right asymmetry (ortholog); establishment of left/right asymmetry (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); visceral heterotaxy 11 (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal B tubule inner sheath (ortholog) 10 51639397 51663713 + 116911555 MODEL JAAIVD010000005;XM_032915544;XM_032915545;XM_032915546 XP_032771435;XP_032771436;XP_032771437 cilia- and flagella-associated protein 45 protein-coding 625993415 LOC116901942 WW domain-containing adapter protein with coiled-coil-like 5 106555062 106557308 + 116901942 MODEL JAAIVD010000023 pseudo 625993416 Palm paralemmin ENCODES a protein that exhibits D3 dopamine receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to electrical stimulus (ortholog); cytoskeleton organization (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) 1 155054540 155079948 - 22301074;30032202 116905626 MODEL JAAIVD010000025;XM_032908611 XP_032764502 paralemmin-1 protein-coding 625993429 Cfap299 cilia and flagella associated protein 299 FOUND IN cytoplasm (ortholog) 11 8596362 8773949 + 22301074;30032202 116912664 MODEL JAAIVD010000006;XM_032916784 XP_032772675 cilia- and flagella-associated protein 299 protein-coding 625993436 LOC116910598 U6 snRNA-associated Sm-like protein LSm5 9 58921399 58921653 + 116910598 MODEL JAAIVD010000002 pseudo 625993437 LOC116889042 high mobility group protein B4-like X 20359785 20360138 + 30032202 116889042 MODEL JAAIVD010000014;XM_032890236 XP_032746127 protein-coding 625993440 Urm1 ubiquitin related modifier 1 ENCODES a protein that exhibits sulfur carrier activity (ortholog); INVOLVED IN tRNA thio-modification (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog) 5 6890556 6915182 - 22301074;30032202 116901212 MODEL JAAIVD010000023;XM_032902927;XM_032902928 XP_032758818;XP_032758819 ubiquitin-related modifier 1 protein-coding 625993452 Shpk sedoheptulokinase ENCODES a protein that exhibits sedoheptulokinase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); cellular response to interleukin-13 (ortholog); cellular response to interleukin-4 (ortholog); ASSOCIATED WITH SEDOHEPTULOKINASE DEFICIENCY (ortholog); FOUND IN cytoplasm (ortholog) 9 42289262 42313317 - 22301074;30032202 116910284 MODEL JAAIVD010000002;XM_032914156 XP_032770047 protein-coding 625993462 Dock10 dedicator of cytokinesis 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); dendritic spine morphogenesis (ortholog); marginal zone B cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 4 153522760 153772382 - 30032202 116899555 MODEL JAAIVD010000003;XM_032901452 XP_032757343 dedicator of cytokinesis protein 10 protein-coding 625993523 LOC116887776 small nucleolar RNA SNORD52 18 7017535 7017600 - 116887776 MODEL JAAIVD010000013;XR_004386273 snorna 625993526 LOC116906336 U6 spliceosomal RNA 7 70655353 70655440 - 116906336 MODEL JAAIVD010000026 pseudo 625993527 LOC116907791 olfactory receptor 18-like 8 15717656 15718608 - 22301074;30032202 116907791 MODEL JAAIVD010000027;XM_032910933 XP_032766824 protein-coding 625993531 LOC116906049 sorting nexin-15-like 7 46494340 46495373 - 116906049 MODEL JAAIVD010000026 pseudo 625993532 LOC116890376 U6 spliceosomal RNA 1 53353908 53354014 - 116890376 MODEL JAAIVD010000025;XR_004386589 snrna 625993535 Bco1 beta-carotene oxygenase 1 ENCODES a protein that exhibits beta-carotene 15,15'-dioxygenase activity (ortholog); INVOLVED IN beta-carotene metabolic process (ortholog); carotene catabolic process (ortholog); retinal metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Hypercarotenemia and Vitamin A Deficiency, Autosomal Dominant (ortholog) 17 36750709 36786831 + 30032202 116886544 MODEL JAAIVD010000011;XM_032888063 XP_032743954 beta,beta-carotene 15,15'-dioxygenase protein-coding 625993550 LOC116888787 40S ribosomal protein S9-like X 95211324 95211975 + 116888787 MODEL JAAIVD010000014 pseudo 625993551 Chrnb2 cholinergic receptor nicotinic beta 2 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); associative learning (ortholog); B cell activation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); anxiety disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 3 63894939 63902819 + 22301074;30032202 116896633 MODEL JAAIVD010000012;XM_032897945 XP_032753836 neuronal acetylcholine receptor subunit beta-2 protein-coding 625993561 Wdr12 WD repeat domain 12 INVOLVED IN maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); dilated cardiomyopathy (ortholog); myocardial infarction (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 6293996 6314230 + 22301074;30032202 116901196 MODEL JAAIVD010000023;XM_032902888;XM_032902889;XM_032902890;XM_032902892 XP_032758779;XP_032758780;XP_032758781;XP_032758783 ribosome biogenesis protein WDR12 protein-coding 625993590 LOC116893823 pyrethroid hydrolase Ces2e-like 2 54745648 54752992 - 30032202 116893823 MODEL JAAIVD010000001;XM_032895537 XP_032751428 protein-coding 625993604 Pex11a peroxisomal biogenesis factor 11 alpha ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); peroxisome fission (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Dyslipidemias (ortholog); obesity (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) 2 120503060 120509929 + 22301074;30032202 116891936 MODEL JAAIVD010000001;XM_032893377;XM_032893378 XP_032749268;XP_032749269 peroxisomal membrane protein 11A protein-coding 625993614 Eci1 enoyl-CoA delta isomerase 1 ENCODES a protein that exhibits delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); identical protein binding (ortholog); intramolecular oxidoreductase activity, transposing C=C bonds (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); FOUND IN mitochondrion (ortholog) 9 1714339 1729178 + 30032202 116909125 MODEL JAAIVD010000002;XM_032912601 XP_032768492 enoyl-CoA delta isomerase 1, mitochondrial protein-coding 625993624 Mrap2 melanocortin 2 receptor accessory protein 2 ENCODES a protein that exhibits corticotropin hormone receptor binding (ortholog); identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN energy homeostasis (ortholog); energy reserve metabolic process (ortholog); feeding behavior (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 8 81145958 81202787 + 30032202 116907111 MODEL JAAIVD010000027;XM_032910080;XM_032910081;XM_032910082;XM_032910083;XM_032910084;XM_032910085;XM_032910086 XP_032765971;XP_032765972;XP_032765973;XP_032765974;XP_032765975;XP_032765976;XP_032765977 melanocortin-2 receptor accessory protein 2 protein-coding 625993652 Gal3st3 galactose-3-O-sulfotransferase 3 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) 2 2356783 2367102 - 22301074;30032202 116890714 MODEL JAAIVD010000001;XM_032891161 XP_032747052 protein-coding 625993659 Tmem205 transmembrane protein 205 8 18172275 18177895 - 116906574 MODEL JAAIVD010000027;XM_032909301;XM_032909302;XM_032909303;XM_032909305;XM_032909306 XP_032765192;XP_032765193;XP_032765194;XP_032765196;XP_032765197 protein-coding 625993680 LOC116884928 uncharacterized LOC116884928 1 271782969 271785279 + 116884928 MODEL JAAIVD010000025;XR_004385907 ncrna 625993684 Wwtr1 WW domain containing transcription regulator 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cilium assembly (ortholog); glomerulus development (ortholog); heart process (ortholog); ASSOCIATED WITH alveolar rhabdomyosarcoma (ortholog); muscular atrophy (ortholog); nephronophthisis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 3 96041214 96159737 - 22301074;30032202 116896844 MODEL JAAIVD010000012;XM_032898349 XP_032754240 WW domain-containing transcription regulator protein 1 protein-coding 625993695 Cckbr cholecystokinin B receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); gastrin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN behavioral defense response (ortholog); cholecystokinin signaling pathway (ortholog); digestive tract development (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Cocaine-Related Disorders (ortholog); colitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 104259217 104269362 + 22301074;30032202 116891816 MODEL JAAIVD010000001;XM_032893172 XP_032749063 gastrin/cholecystokinin type B receptor protein-coding 625993704 LOC116910618 60S ribosomal protein L37a-like 9 3322665 3322953 + 116910618 MODEL JAAIVD010000002 pseudo 625993705 Fat4 FAT atypical cadherin 4 INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cerebral cortex development (ortholog); condensed mesenchymal cell proliferation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); CAKUT (ortholog); cystic kidney disease (ortholog); FOUND IN apical part of cell (ortholog) 3 114972446 115101813 - 22301074;30032202 116896913 MODEL JAAIVD010000012;XM_032898472 XP_032754363 protocadherin Fat 4 protein-coding 625993726 LOC116893440 killer cell immunoglobulin-like receptor 3DL1 2 176403667 176407091 - 116893440 MODEL JAAIVD010000001;XM_032895208 XP_032751099 protein-coding 625993733 Plekhd1 pleckstrin homology and coiled-coil domain containing D1 ASSOCIATED WITH Breast Neoplasms (ortholog) 7 94907903 94937773 + 116905225 MODEL JAAIVD010000026;XM_032908038 XP_032763929 pleckstrin homology domain-containing family D member 1 protein-coding 625993750 LOC116887932 doublesex- and mab-3-related transcription factor C1-like X 60694128 60702560 - 116887932 MODEL JAAIVD010000014;XM_032889395 XP_032745286 protein-coding 625993761 Tmem255b transmembrane protein 255B 13 70245981 70271700 - 116914434 MODEL JAAIVD010000008;XM_032918732 XP_032774623 protein-coding 625993774 Ccdc160 coiled-coil domain containing 160 ASSOCIATED WITH genetic disease (ortholog) X 114407052 114408446 + 116888704 MODEL JAAIVD010000014;XM_032889994 XP_032745885 coiled-coil domain-containing protein 160 protein-coding 625993779 LOC116909882 uncharacterized LOC116909882 9 50658508 50660298 - 116909882 MODEL JAAIVD010000002;XM_032913620 XP_032769511 uncharacterized protein LOC116909882 protein-coding 625993785 Plxdc2 plexin domain containing 2 14 7159583 7345830 - 116883925 MODEL JAAIVD010000009;XM_032885180 XP_032741071 plexin domain-containing protein 2 protein-coding 625993799 LOC116904769 small nucleolar RNA SNORA17 6 42134566 42134690 - 116904769 MODEL JAAIVD010000024 pseudo 625993800 Ccdc73 coiled-coil domain containing 73 5 82819384 82913997 + 116901709 MODEL JAAIVD010000023;XM_032903842 XP_032759733 coiled-coil domain-containing protein 73 protein-coding 625993820 Bcl9l BCL9 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast differentiation (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 8 39028402 39057712 + 30032202 116906664 MODEL JAAIVD010000027;XM_032909447 XP_032765338 B-cell CLL/lymphoma 9-like protein protein-coding 625993834 Sos2 SOS Ras/Rho guanine nucleotide exchange factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); insulin receptor signaling pathway (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH Developmental Disease (ortholog); male infertility (ortholog); Noonan syndrome (ortholog) 7 83229601 83341505 - 22301074;30032202 116905121 MODEL JAAIVD010000026;XM_032907860;XM_032907861 XP_032763751;XP_032763752 son of sevenless homolog 2 protein-coding 625993862 Sft2d3 SFT2 domain containing 3 15 12331408 12333655 + 22301074;30032202 116884701 MODEL JAAIVD010000010;XM_032885889 XP_032741780 vesicle transport protein SFT2C protein-coding 625993867 LOC116909301 protein FAM220A-like 9 18064479 18065193 - 116909301 MODEL JAAIVD010000002 pseudo 625993868 LOC116893717 olfactory receptor 5B12-like 2 13553204 13554145 + 22301074;30032202 116893717 MODEL JAAIVD010000001;XM_032895432 XP_032751323 protein-coding 625993871 Glrx glutaredoxin ENCODES a protein that exhibits glutathione disulfide oxidoreductase activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); cellular response to glucose stimulus (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); Myocardial Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 3 221343706 221350685 - 116897364 MODEL JAAIVD010000012;XM_032899123 XP_032755014 glutaredoxin-1 protein-coding 625993877 Sorl1 sortilin related receptor 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); amyloid-beta formation (ortholog); cell migration (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); atrial fibrillation (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); early endosome membrane (ortholog) 8 36555463 36715316 - 22301074;30032202 116907888 MODEL JAAIVD010000027;XM_032911077 XP_032766968 sortilin-related receptor protein-coding 625993929 LOC116889711 ribonuclease J-like 22301074 116889711 MODEL JAAIVD010000059;XM_032890592 XP_032746483 protein-coding 625993930 LOC116884054 glycolipid transfer protein-like 1 207686659 207765894 + 116884054 MODEL JAAIVD010000025 pseudo 625993931 LOC116889009 RNA-binding protein FUS-like X 14712651 14716239 - 22301074;30032202 116889009 MODEL JAAIVD010000014;XM_032890218 XP_032746109 protein-coding 625993935 Pik3r1 phosphoinositide-3-kinase regulatory subunit 1 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-3-kinase regulator activity (ortholog); ATPase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to fatty acid (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH agammaglobulinemia 7 (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell-cell junction (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) 3 195528436 195613095 - 22301074;30032202 116897241 MODEL JAAIVD010000012;XM_032898969;XM_032898970;XM_032898971 XP_032754860;XP_032754861;XP_032754862 phosphatidylinositol 3-kinase regulatory subunit alpha protein-coding 625993961 Ush1g USH1 protein network component sans ENCODES a protein that exhibits identical protein binding (ortholog); spectrin binding (ortholog); INVOLVED IN equilibrioception (ortholog); inner ear morphogenesis (ortholog); inner ear receptor cell differentiation (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 18 (ortholog); autosomal recessive nonsyndromic deafness 18A (ortholog); FOUND IN actin cytoskeleton (ortholog); Cajal body (ortholog); ciliary basal body (ortholog) 9 68780071 68783931 + 22301074 116909656 MODEL JAAIVD010000002;XM_032913309 XP_032769200 Usher syndrome type-1G protein protein-coding 625993965 Nup43 nucleoporin 43 PARTICIPATES IN mRNA nuclear export pathway; FOUND IN cytosol (ortholog); kinetochore (ortholog); nuclear envelope (ortholog) 2 229366629 229376435 - 22301074;30032202 116893041 MODEL JAAIVD010000001;XM_032895005 XP_032750896 nucleoporin Nup43 protein-coding 625993977 Prmt8 protein arginine methyltransferase 8 ENCODES a protein that exhibits enzyme binding (ortholog); histone H4 methyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN peptidyl-arginine methylation (ortholog); protein homooligomerization (ortholog); protein methylation (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 6 20138165 20219346 + 22301074;30032202 116903231 MODEL JAAIVD010000024;XM_032905608 XP_032761499 protein arginine N-methyltransferase 8 protein-coding 625993991 LOC116889516 small nucleolar RNA SNORA17 X 109523924 109524055 - 116889516 MODEL JAAIVD010000014;XR_004386459 snorna 625993994 LOC116900534 olfactory receptor 4F15-like 5 89516484 89517482 + 22301074 116900534 MODEL JAAIVD010000023;XM_032902261 XP_032758152 protein-coding 625993998 LOC116915230 olfactory receptor 1F12 14 41156976 41157956 - 22301074;30032202 116915230 MODEL JAAIVD010000009;XM_032919619 XP_032775510 protein-coding 625994001 LOC116913860 aurora kinase A-like 12 89181250 89338174 - 116913860 MODEL JAAIVD010000007 pseudo 625994002 Fxr1 FMR1 autosomal homolog 1 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); molecular condensate scaffold activity (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); dentate gyrus development (ortholog); membraneless organelle assembly (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); congenital myopathy 1B (ortholog); congenital myopathy 9A (ortholog); FOUND IN axon (ortholog); costamere (ortholog); cytoplasm (ortholog) 3 119756258 119809502 - 30032202 116896947 MODEL JAAIVD010000012;XM_032898511;XM_032898512;XM_032898513;XM_032898514;XM_032898515;XM_032898516 XP_032754402;XP_032754403;XP_032754404;XP_032754405;XP_032754406;XP_032754407 fragile X mental retardation syndrome-related protein 1 protein-coding 625994034 LOC116911987 uncharacterized LOC116911987 11 44777585 44782066 + 116911987 MODEL JAAIVD010000006 pseudo 625994035 Asl argininosuccinate lyase ENCODES a protein that exhibits argininosuccinate lyase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); ammonia assimilation cycle (ortholog); arginine metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); argininosuccinic aciduria (ortholog); autistic disorder (ortholog); FOUND IN cell body fiber (ortholog); mitochondrial outer membrane (ortholog); neuronal cell body (ortholog) 16 23963753 23981724 + 22301074;30032202 116885382 MODEL JAAIVD010000004;XM_032886658;XM_032886659;XM_032886660 XP_032742549;XP_032742550;XP_032742551 protein-coding 625994062 LOC116886951 UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit 18 2118234 2123551 - 22301074;30032202 116886951 MODEL JAAIVD010000013;XM_032888451 XP_032744342 protein-coding 625994068 LOC116894520 vomeronasal type-1 receptor 4-like 2 174972006 174972953 - 22301074;30032202 116894520 MODEL JAAIVD010000001;XM_032896221 XP_032752112 protein-coding 625994071 Phox2b paired like homeobox 2B ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); brainstem development (ortholog); cell development (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); congenital central hypoventilation syndrome (ortholog); Congenital Central Hypoventilation Syndrome 1 (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 24223743 24226482 - 22301074;30032202 116912822 MODEL JAAIVD010000006;XM_032917003 XP_032772894 paired mesoderm homeobox protein 2B protein-coding 625994076 LOC116885668 CD209 antigen-like protein A 16 1679610 1685355 - 116885668 MODEL JAAIVD010000004;XM_032886979 XP_032742870 protein-coding 625994087 LOC116915126 U1 spliceosomal RNA 13 18613950 18614115 + 116915126 MODEL JAAIVD010000008;XR_004389806 snrna 625994090 LOC116902933 40S ribosomal protein S3-like 6 116072527 116073337 - 116902933 MODEL JAAIVD010000024 pseudo 625994091 LOC116898239 40S ribosomal protein SA-like 4 152640566 152641433 + 116898239 MODEL JAAIVD010000003 pseudo 625994092 LOC116914490 zinc finger protein 709-like 13 12030192 12040683 - 30032202 116914490 MODEL JAAIVD010000008;XM_032918802 XP_032774693 protein-coding 625994100 Dmtn dematin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); signaling receptor binding (ortholog); spectrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); cellular response to cAMP (ortholog); FOUND IN actin filament (ortholog); cell projection membrane (ortholog); cortical cytoskeleton (ortholog) 12 53734092 53750476 + 22301074;30032202 116913372 MODEL JAAIVD010000007;XM_032917542;XM_032917543 XP_032773433;XP_032773434 dematin protein-coding 625994120 LOC116908791 uncharacterized LOC116908791 1 186385970 186387028 - 116908791 MODEL JAAIVD010000025;XR_004389027 ncrna 625994124 Gns glucosamine (N-acetyl)-6-sulfatase ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); sulfate binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); keratan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); mucopolysaccharidosis III (ortholog); mucopolysaccharidosis type IIID (ortholog); FOUND IN azurophil granule (ortholog); lysosome (ortholog) 1 199379822 199413624 + 22301074;30032202 116909499 MODEL JAAIVD010000025;XM_032913106 XP_032768997 N-acetylglucosamine-6-sulfatase protein-coding 625994142 Lekr1 leucine, glutamate and lysine rich 1 3 89894179 90057009 - 116896812 MODEL JAAIVD010000012;XM_032898288 XP_032754179 leucine-, glutamate- and lysine-rich protein 1 protein-coding 625994159 LOC116911813 small nucleolar RNA U6-53/MBII-28 10 8369533 8369641 - 116911813 MODEL JAAIVD010000005;XR_004389352 snorna 625994162 Ttyh3 tweety family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); L-glutamate transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 16 12556000 12584644 + 30032202 116885171 MODEL JAAIVD010000004;XM_032886386;XM_032886387 XP_032742277;XP_032742278 protein tweety homolog 3 protein-coding 625994184 LOC116905570 eukaryotic translation initiation factor 5-like 7 91803935 91805088 + 116905570 MODEL JAAIVD010000026 pseudo 625994185 LOC116890474 small nucleolar RNA SNORA2/SNORA34 family 1 271346157 271346293 - 116890474 MODEL JAAIVD010000025;XR_004386663 snorna 625994188 LOC116900299 olfactory receptor 8K3-like 5 63756278 63757213 - 22301074;30032202 116900299 MODEL JAAIVD010000023;XM_032902054 XP_032757945 protein-coding 625994191 Ggt1 gamma-glutamyltransferase 1 ENCODES a protein that exhibits aminoacyltransferase activity (ortholog); glutathione hydrolase activity (ortholog); leukotriene-C(4) hydrolase (ortholog); INVOLVED IN amino acid metabolic process (ortholog); cellular response to oxidative stress (ortholog); cysteine biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH aflatoxins-related hepatocellular carcinoma (ortholog); Albuminuria (ortholog); alcohol dependence (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog); vesicle (ortholog) 18 11858956 11869227 - 22301074;30032202 116887359 MODEL JAAIVD010000013;XM_032888953 XP_032744844 glutathione hydrolase 1 proenzyme protein-coding 625994205 LOC116905658 uncharacterized LOC116905658 7 40584697 40604589 - 116905658 MODEL JAAIVD010000026;XR_004388557 ncrna 625994210 Htd2 hydroxyacyl-thioester dehydratase type 2 FOUND IN mitochondrion (ortholog); nucleolus (ortholog) 12 78507878 78508636 + 116914002 MODEL JAAIVD010000007;XM_032918273 XP_032774164 hydroxyacyl-thioester dehydratase type 2, mitochondrial protein-coding 625994215 LOC116900171 cytochrome P450 2J3 1 58890917 59217576 - 22301074;30032202 116900171 MODEL JAAIVD010000025;XM_032901931;XM_032901936;XM_032901944;XM_032901952;XM_032901957 XP_032757822;XP_032757827;XP_032757835;XP_032757843;XP_032757848 protein-coding 625994246 Hmga2 high mobility group AT-hook 2 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); C2H2 zinc finger domain binding (ortholog); cAMP response element binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adrenal gland development (ortholog); base-excision repair (ortholog); PARTICIPATES IN Ras mediated signaling pathway; ASSOCIATED WITH Birth Weight (ortholog); disease of cellular proliferation (ortholog); Hamartoma (ortholog); FOUND IN male germ cell nucleus (ortholog); nuclear chromosome (ortholog); nucleus (ortholog) 1 198345800 198460679 - 22301074;30032202 116909445 MODEL JAAIVD010000025;XM_032913027 XP_032768918 high mobility group protein HMGI-C protein-coding 625994255 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41697852 41697933 + 116884212 MODEL JAAIVD010000009 trna 625994256 LOC116909659 40S ribosomal protein S27-like 9 87394057 87394314 + 22301074;30032202 116909659 MODEL JAAIVD010000002;XM_032913312 XP_032769203 protein-coding 625994260 Pprc1 PPARG related coactivator 1 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 45525541 45542074 + 22301074;30032202 116891237 MODEL JAAIVD010000001;XM_032892091;XM_032892092;XM_032892093;XM_032892094;XM_032892096;XM_032892097;XM_032892098;XM_032892099 XP_032747982;XP_032747983;XP_032747984;XP_032747985;XP_032747987;XP_032747988;XP_032747989;XP_032747990 peroxisome proliferator-activated receptor gamma coactivator-related protein 1 protein-coding 625994296 LOC116911281 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1-like 10 3941082 3941450 + 116911281 MODEL JAAIVD010000005;XM_032915187 XP_032771078 protein-coding 625994301 LOC116908222 14-3-3 protein theta-like 8 75789574 75790225 + 116908222 MODEL JAAIVD010000027 pseudo 625994302 Srsf3 serine and arginine rich splicing factor 3 ENCODES a protein that exhibits phospholipase binding (ortholog); pre-mRNA binding (ortholog); primary miRNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mRNA export from nucleus (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH bipolar disorder (ortholog); ovary epithelial cancer (ortholog); Wallerian Degeneration (ortholog); FOUND IN nuclear speck (ortholog) 18 4826929 4836602 - 22301074;30032202 116886928 MODEL JAAIVD010000013;XM_032888410 XP_032744301 serine/arginine-rich splicing factor 3 protein-coding 625994312 LOC116912605 uncharacterized LOC116912605 11 72636875 72643939 - 116912605 MODEL JAAIVD010000006;XR_004389473 ncrna 625994317 Ppp1r27 protein phosphatase 1 regulatory subunit 27 ENCODES a protein that exhibits phosphatase binding (ortholog) 9 63469802 63470971 + 30032202 116909456 MODEL JAAIVD010000002;XM_032913037 XP_032768928 protein-coding 625994324 LOC116910650 small nucleolar RNA SNORD96 family 9 31402780 31402859 + 116910650 MODEL JAAIVD010000002;XR_004389185 snorna 625994327 Ncbp2as2 NCBP2 antisense 2 (head to head) FOUND IN mitochondrion (ortholog) 4 16785112 16785822 - 116898761 MODEL JAAIVD010000003;XM_032900089 XP_032755980 protein NCBP2AS2 protein-coding 625994332 LOC116898940 interferon-induced GTP-binding protein Mx1 4 47102619 47126570 + 22301074;30032202 116898940 MODEL JAAIVD010000003;XM_032900356 XP_032756247 protein-coding 625994350 LOC116897936 olfactory receptor 187 4 42907252 42908187 - 22301074;30032202 116897936 MODEL JAAIVD010000003;XM_032899335 XP_032755226 protein-coding 625994354 C2H10orf120 chromosome 2 C10orf120 homolog 2 70687948 70690677 + 116891413 MODEL JAAIVD010000001;XM_032892439 XP_032748330 uncharacterized protein C10orf120 homolog protein-coding 625994360 Esf1 ESF1 nucleolar pre-rRNA processing protein 5 119421243 119473672 - 22301074;30032202 116902029 MODEL AB038233;JAAIVD010000023;XM_032904307 BAD10946;XP_032760198 ABTAP ESF1 homolog;ESF1 nucleolar pre-rRNA processing protein homolog protein-coding 625994378 LOC116900624 uncharacterized LOC116900624 5 107942137 107944265 - 116900624 MODEL JAAIVD010000023;XR_004387939 ncrna 625994383 Slc9a5 solute carrier family 9 member A5 ENCODES a protein that exhibits arrestin family protein binding (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN proton transmembrane transport (ortholog); regulation of intracellular pH (ortholog); sodium ion transmembrane transport (ortholog); ASSOCIATED WITH end stage renal disease (ortholog); FOUND IN focal adhesion (ortholog); neuron spine (ortholog); plasma membrane (ortholog) 17 25074877 25094411 + 22301074;30032202 116886269 MODEL JAAIVD010000011;XM_032887691;XM_032887693 XP_032743582;XP_032743584 sodium/hydrogen exchanger 5 protein-coding 625994405 LOC116898175 NHP2-like protein 1 4 127449382 127449769 + 116898175 MODEL JAAIVD010000003 pseudo 625994406 LOC116911788 probable UDP-sugar transporter protein SLC35A4 10 85169943 85170938 + 22301074;30032202 116911788 MODEL JAAIVD010000005;XM_032915783 XP_032771674 protein-coding 625994409 B9d2 B9 domain containing 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH ciliopathy (ortholog); Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) 2 169108492 169114534 - 30032202 116892451 MODEL JAAIVD010000001;XM_032894156 XP_032750047 B9 domain-containing protein 2 protein-coding 625994417 Banp BTG3 associated nuclear protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 41594161 41667071 + 22301074;30032202 116886103 MODEL JAAIVD010000011;XM_032887433 XP_032743324 protein BANP protein-coding 625994435 LOC116910665 small nucleolar RNA R38 9 67396627 67396700 - 116910665 MODEL JAAIVD010000002;XR_004389197 snorna 625994438 Arel1 apoptosis resistant E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein K11-linked ubiquitination (ortholog); protein K33-linked ubiquitination (ortholog); FOUND IN cytosol (ortholog) 7 99024284 99049667 - 22301074;30032202 116905282 MODEL JAAIVD010000026;XM_032908144 XP_032764035 apoptosis-resistant E3 ubiquitin protein ligase 1 protein-coding 625994460 LOC116887329 olfactory receptor 14J1-like 18 10532601 10533473 + 22301074;30032202 116887329 MODEL JAAIVD010000013;XM_032888922 XP_032744813 protein-coding 625994463 Epas1 endothelial PAS domain protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); cobalt ion binding (ortholog); DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel remodeling (ortholog); cell differentiation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); azoospermia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 7 6151631 6231134 - 22301074;30032202 116905758 MODEL JAAIVD010000026;XM_032908729 XP_032764620 endothelial PAS domain-containing protein 1 protein-coding 625994483 Aff1 ALF transcription elongation factor 1 INVOLVED IN positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH teratoma (ortholog); FOUND IN nucleus (ortholog); transcription elongation factor complex (ortholog) 11 13783109 13942749 + 22301074;30032202 116912222 MODEL JAAIVD010000006;XM_032916179 XP_032772070 AF4/FMR2 family member 1 protein-coding 625994508 LOC116889366 X-linked interleukin-1 receptor accessory protein-like 2 X 63834619 63851568 - 116889366 MODEL JAAIVD010000014;XM_032890472 XP_032746363 protein-coding 625994515 LOC116883281 uncharacterized LOC116883281 14 81642354 81643582 - 116883281 MODEL JAAIVD010000009;XM_032884272 XP_032740163 uncharacterized protein LOC116883281 protein-coding 625994519 LOC116907782 olfactory receptor 8B3-like 8 32501801 32502685 + 116907782 MODEL JAAIVD010000027 pseudo 625994520 LOC116909979 uncharacterized LOC116909979 9 17408521 17411607 + 116909979 MODEL JAAIVD010000002;XR_004389120 ncrna 625994524 LOC116902419 uncharacterized LOC116902419 5 157792218 157804880 - 116902419 MODEL JAAIVD010000023;XR_004388068 ncrna 625994529 Pdyn prodynorphin INVOLVED IN locomotion involved in locomotory behavior (ortholog); response to ethanol (ortholog); response to immobilization stress (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon terminus (ortholog); dendritic spine (ortholog); dense core granule (ortholog) 5 108417820 108428845 - 22301074;30032202 116901960 MODEL JAAIVD010000023;XM_032904199 XP_032760090 proenkephalin-B protein-coding 625994536 LOC116902503 U6 spliceosomal RNA 5 113920812 113920907 + 116902503 MODEL JAAIVD010000023 pseudo 625994537 Col16a1 collagen type XVI alpha 1 chain ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog) 1 28052649 28105586 - 116896006 MODEL JAAIVD010000025;XM_032897029 XP_032752920 collagen alpha-1(XVI) chain protein-coding 625994612 Edn3 endothelin 3 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); axon extension (ortholog); axon guidance (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Bradycardia (ortholog); congenital central hypoventilation syndrome (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog) 5 143213952 143220221 - 22301074;30032202 116902261 MODEL JAAIVD010000023;XM_032904680 XP_032760571 endothelin-3 protein-coding 625994619 LOC116885925 protein FAM205A-2-like 1 3662138 3667869 + 116885925 MODEL JAAIVD010000025;XM_032887238 XP_032743129 protein-coding 625994626 Adh1c alcohol dehydrogenase 1C (class I), gamma polypeptide ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); behavioral response to ethanol (ortholog); ethanol catabolic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Binge Drinking (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytosol (ortholog) 3 20876824 20888259 - 22301074;30032202 116896210 MODEL JAAIVD010000012;XM_032897260 XP_032753151 alcohol dehydrogenase 1C protein-coding 625994639 LOC116889900 olfactory receptor 6C74-like 1 160064555 160069938 + 22301074;30032202 116889900 MODEL JAAIVD010000025;XM_032890723 XP_032746614 protein-coding 625994643 Fcgr1a Fc fragment of IgG receptor Ia ENCODES a protein that exhibits high-affinity IgG receptor activity (ortholog); IgG binding (ortholog); IgG receptor activity (ortholog); INVOLVED IN antibody-dependent cellular cytotoxicity (ortholog); antigen processing and presentation of exogenous antigen (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); calcinosis (ortholog); Experimental Arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 3 60992286 61001201 + 30032202 116896510 MODEL JAAIVD010000012;XM_032897692 XP_032753583 high affinity immunoglobulin gamma Fc receptor I protein-coding 625994653 Tmx4 thioredoxin related transmembrane protein 4 FOUND IN endoplasmic reticulum (ortholog); nuclear inner membrane (ortholog) 5 114278225 114315792 - 116902012 MODEL JAAIVD010000023;XM_032904279 XP_032760170 thioredoxin-related transmembrane protein 4 protein-coding 625994665 Rab3a RAB3A, member RAS oncogene family ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); axonogenesis (ortholog); calcium-ion regulated exocytosis (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH Ependymomas (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); endosome (ortholog) 13 12995322 12999296 + 22301074;30032202 116914423 MODEL JAAIVD010000008;XM_032918693 XP_032774584 ras-related protein Rab-3A protein-coding 625994674 Mrpl13 mitochondrial ribosomal protein L13 ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Mouth Neoplasms (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 1 229938163 229959863 - 22301074;30032202 116911594 MODEL JAAIVD010000025;XM_032915573;XM_032915578 XP_032771464;XP_032771469 39S ribosomal protein L13, mitochondrial protein-coding 625994688 Dipk1c divergent protein kinase domain 1C 15 47631048 47652811 - 116884833 MODEL JAAIVD010000010;XM_032886071 XP_032741962 protein-coding 625994695 Frem3 FRAS1 related extracellular matrix 3 ASSOCIATED WITH major depressive disorder (ortholog); FOUND IN basement membrane (ortholog) 17 19379179 19446286 - 22301074 116886392 MODEL JAAIVD010000011;XM_032887859 XP_032743750 FRAS1-related extracellular matrix protein 3 protein-coding 625994706 Scn7a sodium voltage-gated channel alpha subunit 7 ENCODES a protein that exhibits osmolarity-sensing monoatomic cation channel activity (ortholog); sodium channel activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN cellular homeostasis (ortholog); membrane depolarization during action potential (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH autistic disorder (ortholog); brain infarction (ortholog); FOUND IN glial cell projection (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 5 44102237 44198091 - 22301074;30032202 116901470 MODEL JAAIVD010000023;XM_032903420 XP_032759311 sodium channel protein type 7 subunit alpha protein-coding 625994735 LOC116888816 nucleosome assembly protein 1-like 3 X 76014524 76017337 + 22301074;30032202 116888816 MODEL JAAIVD010000014;XM_032890095 XP_032745986 protein-coding 625994740 Cspg4 chondroitin sulfate proteoglycan 4 ENCODES a protein that exhibits collagen binding (ortholog); coreceptor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN glial cell migration (ortholog); intracellular signal transduction (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN cell projection (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 8 50771566 50806714 + 116907379 MODEL JAAIVD010000027;XM_032910333 XP_032766224 protein-coding 625994754 LOC116896049 40S ribosomal protein S10-like 3 199603586 199604185 - 116896049 MODEL JAAIVD010000012 pseudo 625994755 Atxn1l ataxin 1 like ENCODES a protein that exhibits POZ domain binding (ortholog); INVOLVED IN brain development (ortholog); extracellular matrix organization (ortholog); learning (ortholog); ASSOCIATED WITH Spinocerebellar Ataxias (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 17 29445030 29456140 - 22301074;30032202 116886179 MODEL JAAIVD010000011;XM_032887547;XM_032887548 XP_032743438;XP_032743439 ataxin-1-like protein-coding 625994764 Ythdf3 YTH N6-methyladenosine RNA binding protein F3 ENCODES a protein that exhibits N6-methyladenosine-containing RNA reader activity (ortholog); ribosome binding (ortholog); RNA binding (ortholog); INVOLVED IN mRNA destabilization (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); positive regulation of translation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); P-body (ortholog) 3 137813175 137847192 - 30032202 116897014 MODEL JAAIVD010000012;XM_032898616;XM_032898617 XP_032754507;XP_032754508 YTH N6-methyladenosine RNA binding protein 3;YTH domain-containing family protein 3 protein-coding 625994777 Insl6 insulin like 6 INVOLVED IN ectopic germ cell programmed cell death (ortholog); fertilization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Hereditary Neoplastic Syndromes (ortholog) 2 29401037 29404305 - 22301074 116893760 MODEL JAAIVD010000001;XM_032895463 XP_032751354 insulin-like peptide INSL6 protein-coding 625994783 Nhs NHS actin remodeling regulator INVOLVED IN cell differentiation (ortholog); lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 40 (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); Golgi apparatus (ortholog); nuclear body (ortholog) X 22556779 22885301 + 30032202 116888788 MODEL JAAIVD010000014;XM_032890068;XM_032890069 XP_032745959;XP_032745960 Nance-Horan syndrome protein protein-coding 625994797 Commd1 copper metabolism domain containing 1 ENCODES a protein that exhibits copper ion binding (ortholog); identical protein binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); copper ion homeostasis (ortholog); Golgi to plasma membrane transport (ortholog); ASSOCIATED WITH allergic disease (ortholog); Chronic Hepatitis (ortholog); Copper-Overload Cirrhosis (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 93909339 94001322 + 22301074;30032202 116912868 MODEL JAAIVD010000006;XM_032917086;XM_032917087;XM_032917089 XP_032772977;XP_032772978;XP_032772980 COMM domain-containing protein 1 protein-coding 625994813 LOC116885887 NXPE family member 3-like 16 15591776 15603222 - 116885887 MODEL JAAIVD010000004;XM_032887206 XP_032743097 protein-coding 625994821 Ndufs4 NADH:ubiquinone oxidoreductase subunit S4 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); brain development (ortholog); ASSOCIATED WITH brain disease (ortholog); COVID-19 (ortholog); developmental coordination disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 3 182324623 182434062 + 22301074;30032202 116897181 MODEL JAAIVD010000012;XM_032898867 XP_032754758 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial protein-coding 625994830 Slc44a4 solute carrier family 44 member 4 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); thiamine pyrophosphate transmembrane transporter activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); acetylcholine secretion (ortholog); choline transport (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 72 (ortholog); nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog) 18 7505702 7521593 + 30032202 116887034 MODEL JAAIVD010000013;XM_032888526 XP_032744417 choline transporter-like protein 4 protein-coding 625994855 LOC116902558 small nucleolar RNA SNORA48 5 105490246 105490385 - 116902558 MODEL JAAIVD010000023;XR_004388157 snorna 625994858 LOC116902648 U2 spliceosomal RNA 5 102363629 102363783 + 116902648 MODEL JAAIVD010000023 pseudo 625994859 Neu4 neuraminidase 4 ENCODES a protein that exhibits exo-alpha-sialidase activity (ortholog); INVOLVED IN ganglioside catabolic process (ortholog); glycoprotein catabolic process (ortholog); negative regulation of neuron projection development (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); lysosome (ortholog); mitochondrial inner membrane (ortholog) 4 165785526 165789960 + 30032202 116899679 MODEL JAAIVD010000003;XM_032901696;XM_032901697 XP_032757587;XP_032757588 sialidase-4 protein-coding 625994869 Rab24 RAB24, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); autophagy (ortholog); meiotic nuclear division (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 14 73644482 73646675 - 22301074 116883468 MODEL JAAIVD010000009;XM_032884621 XP_032740512 ras-related protein Rab-24 protein-coding 625994881 Cops3 COP9 signalosome subunit 3 INVOLVED IN in utero embryonic development (ortholog); protein deneddylation (ortholog); regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Hepatomegaly (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 75312469 75315905 + 116894887 MODEL JAAIVD010000025;XM_032896505 XP_032752396 COP9 signalosome complex subunit 3 protein-coding 625994888 LOC116885571 60S ribosomal protein L7a-like 16 43613053 43613835 - 116885571 MODEL JAAIVD010000004 pseudo 625994889 Hoxb7 homeobox B7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic organ development (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 58093818 58097897 - 22301074;30032202 116908556 MODEL JAAIVD010000002;XM_032911760 XP_032767651 homeobox protein Hox-B7 protein-coding 625994895 Slc30a4 solute carrier family 30 member 4 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN lactation (ortholog); response to toxic substance (ortholog); response to vitamin A (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); prostate carcinoma in situ (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); late endosome (ortholog) 5 100767237 100789121 - 30032202 116901894 MODEL JAAIVD010000023;XM_032904104 XP_032759995 zinc transporter 4 protein-coding 625994906 Vkorc1 vitamin K epoxide reductase complex subunit 1 ENCODES a protein that exhibits vitamin-K-epoxide reductase (warfarin-insensitive) activity (ortholog); vitamin-K-epoxide reductase (warfarin-sensitive) activity (ortholog); INVOLVED IN blood coagulation (ortholog); bone development (ortholog); peptidyl-glutamic acid carboxylation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Aortic Calcification (ortholog); Aortic Rupture (ortholog); blood coagulation disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 2 74010533 74012963 + 22301074;30032202;35970209 116891450 D7RY30;D7RY31;D7RY33;I4DXG3 MODEL AB702679;HM181979;HM181980;HM181981;HM181982;HM181983;HM181984;HM181985;JAAIVD010000001;LC164808;LC164809;LC164810;LC164811;LC164812;LC270886;LC270887;LC270888;LC270889;LC270890;XM_032892517;XM_032892518 ADI56524;ADI56525;ADI56526;ADI56527;ADI56528;ADI56529;ADI56530;BAM22603;XP_032748408;XP_032748409 protein-coding 625994915 Wdfy1 WD repeat and FYVE domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN positive regulation of toll-like receptor 3 signaling pathway (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); early endosome (ortholog) 4 152771620 152822498 - 22301074 116899550 MODEL JAAIVD010000003;XM_032901445;XR_004387733 XP_032757336 WD repeat and FYVE domain-containing protein 1 protein-coding 625994934 Ackr5 atypical chemokine receptor 5 ENCODES a protein that exhibits adrenomedullin receptor activity (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine binding (ortholog); INVOLVED IN response to hypoxia (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); pulmonary hypertension (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog) 1 206196282 206199132 - 22301074 116910255 MODEL JAAIVD010000025;XM_032914143;XM_032914149 XP_032770034;XP_032770040 Gpr182 G protein-coupled receptor 182;G-protein coupled receptor 182 protein-coding 625994946 Usp18 ubiquitin specific peptidase 18 ENCODES a protein that exhibits ISG15-specific peptidase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); negative regulation of type I interferon-mediated signaling pathway (ortholog); regulation of inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Chronic Hepatitis C (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 6 25475470 25492652 - 22301074;30032202 116903319 MODEL JAAIVD010000024;XM_032905754 XP_032761645 ubl carboxyl-terminal hydrolase 18 protein-coding 625994960 Arpc1b actin related protein 2/3 complex subunit 1B ENCODES a protein that exhibits actin filament binding (ortholog); protein-containing complex binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); response to estradiol (ortholog); response to estrogen (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); combined immunodeficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN Arp2/3 protein complex (ortholog); tubulobulbar complex (ortholog) 16 8167413 8180983 - 22301074;30032202 116885661 MODEL JAAIVD010000004;XM_032886965 XP_032742856 actin-related protein 2/3 complex subunit 1B protein-coding 625994974 LOC116909188 thioredoxin domain-containing protein 15-like 1 194747608 194748692 - 116909188 MODEL JAAIVD010000025 pseudo 625994975 LOC116914096 small nuclear ribonucleoprotein G-like 12 48241399 48241620 + 116914096 MODEL JAAIVD010000007 pseudo 625994976 Ucma upper zone of growth plate and cartilage matrix associated ENCODES a protein that exhibits BMP binding (ortholog); INVOLVED IN negative regulation of osteoblast differentiation (ortholog); negative regulation of SMAD protein signal transduction (ortholog); ASSOCIATED WITH keratoconus (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) 14 11324978 11331776 + 22301074;30032202 116883673 MODEL JAAIVD010000009;XM_032884871 XP_032740762 unique cartilage matrix-associated protein protein-coding 625994985 LOC116912472 U6 snRNA-associated Sm-like protein LSm3 11 70633756 70635524 - 116912472 MODEL JAAIVD010000006 pseudo 625994986 LOC116885473 selenoprotein H-like 16 4381300 4381859 - 116885473 MODEL JAAIVD010000004 pseudo 625994987 LOC116908129 cytochrome c oxidase subunit 6A1, mitochondrial-like 8 61289419 61289730 + 116908129 MODEL JAAIVD010000027 pseudo 625994988 Snx11 sorting nexin 11 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); INVOLVED IN vesicle organization (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) 9 57611190 57621307 + 22301074;30032202 116909440 MODEL JAAIVD010000002;XM_032913016;XM_032913017;XM_032913018;XM_032913019 XP_032768907;XP_032768908;XP_032768909;XP_032768910 sorting nexin-11 protein-coding 625995006 Ffar3 free fatty acid receptor 3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to fatty acid (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH essential hypertension (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 165161909 165163861 + 22301074;30032202 116894450 MODEL JAAIVD010000001;XM_032896155 XP_032752046 protein-coding 625995012 Znf786 zinc finger protein 786 FOUND IN nucleus (ortholog) 6 93052085 93061930 + 116903877 MODEL JAAIVD010000024;XM_032906629 XP_032762520 protein-coding 625995019 LOC116894207 olfactory receptor 494-like 2 106420326 106421270 + 22301074;30032202 116894207 MODEL JAAIVD010000001;XM_032895919 XP_032751810 protein-coding 625995022 Cul4a cullin 4A ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN base-excision repair, AP site formation via deaminated base removal (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 13 70544137 70581687 - 22301074;30032202 116914706 MODEL JAAIVD010000008;XM_032919134;XM_032919136 XP_032775025;XP_032775027 cullin-4A protein-coding 625995049 LOC116888312 dead end protein homolog 1-like X 23292611 23293668 + 116888312 MODEL JAAIVD010000014 pseudo 625995050 Ccdc191 coiled-coil domain containing 191 4 28789256 28855569 + 30032202 116898856 MODEL JAAIVD010000003;XM_032900218 XP_032756109 coiled-coil domain-containing protein 191 protein-coding 625995071 LOC116907195 interferon-inducible double-stranded RNA-dependent protein kinase activator A-like 8 3900807 3902345 - 116907195 MODEL JAAIVD010000027 pseudo 625995072 Snph syntaphilin INVOLVED IN neuron differentiation (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); mitochondrial membrane (ortholog) 5 130964822 131006210 - 30032202 116902105 MODEL JAAIVD010000023;XM_032904410;XM_032904411;XM_032904412;XM_032904413;XM_032904414;XM_032904415 XP_032760301;XP_032760302;XP_032760303;XP_032760304;XP_032760305;XP_032760306 protein-coding 625995098 LOC116904549 uncharacterized LOC116904549 1 153716106 153718629 - 116904549 MODEL JAAIVD010000025;XR_004388341 ncrna 625995103 LOC116888754 olfactory receptor 10C1-like X 113137368 113138327 - 22301074 116888754 MODEL JAAIVD010000014;XM_032890048 XP_032745939 protein-coding 625995106 Ksr1 kinase suppressor of ras 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); Ras protein signal transduction (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 9 91302527 91434524 + 22301074;30032202 116908619 MODEL JAAIVD010000002;XM_032911856;XM_032911857;XM_032911858 XP_032767747;XP_032767748;XP_032767749 protein-coding 625995139 LOC116902763 glyceraldehyde-3-phosphate dehydrogenase-like 6 68197047 68198029 - 116902763 MODEL JAAIVD010000024 pseudo 625995140 St8sia4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); N-glycan processing (ortholog); oligosaccharide metabolic process (ortholog); FOUND IN Golgi apparatus (ortholog) 4 166106007 166195828 + 22301074;30032202 116899680 MODEL JAAIVD010000003;XM_032901698 XP_032757589 CMP-N-acetylneuraminate-poly-alpha-2,8-sialyltransferase protein-coding 625995149 LOC116902858 olfactory receptor 2A5 6 97574307 97575239 - 22301074 116902858 MODEL JAAIVD010000024;XM_032905187 XP_032761078 protein-coding 625995152 LOC116909943 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like 9 67297039 67306565 + 22301074;30032202 116909943 MODEL JAAIVD010000002;XM_032913717 XP_032769608 protein-coding 625995164 LOC116907510 60S ribosomal protein L34-like 1 36201341 36203029 + 116907510 MODEL JAAIVD010000025 pseudo 625995165 LOC116894153 olfactory receptor 2AG2-like 2 104890261 104891211 + 22301074 116894153 MODEL JAAIVD010000001;XM_032895871 XP_032751762 protein-coding 625995168 LOC116889542 small nucleolar RNA SNORA11 X 89071976 89072101 - 116889542 MODEL JAAIVD010000014;XR_004386477 snorna 625995171 Capns1 calpain small subunit 1 ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); primary pulmonary hypertension 6 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN calpain complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 165808746 165818647 + 22301074 116892332 MODEL JAAIVD010000001;XM_032893960 XP_032749851 protein-coding 625995186 LOC116914453 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 13 41195118 41195372 - 22301074;30032202 116914453 MODEL JAAIVD010000008;XM_032918755 XP_032774646 protein-coding 625995189 LOC116911505 40S ribosomal protein S28-like 10 44821914 44822321 - 116911505 MODEL JAAIVD010000005 pseudo 625995190 Mark3 microtubule affinity regulating kinase 3 ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein serine/threonine kinase activity (ortholog); tau-protein kinase activity (ortholog); INVOLVED IN negative regulation of hippo signaling (ortholog); negative regulation of protein localization to nucleus (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH visual impairment and progressive phthisis bulbi (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); plasma membrane (ortholog) 7 129164749 129252600 + 22301074;30032202 116905492 MODEL JAAIVD010000026;XM_032908491;XM_032908492;XM_032908493;XM_032908494;XM_032908495;XM_032908496;XM_032908497;XM_032908498;XM_032908499 XP_032764382;XP_032764383;XP_032764384;XP_032764385;XP_032764386;XP_032764387;XP_032764388;XP_032764389;XP_032764390 MAP/microtubule affinity-regulating kinase 3 protein-coding 625995222 Spink4 serine peptidase inhibitor Kazal type 4 INVOLVED IN response to xenobiotic stimulus (ortholog) 1 117250325 117262145 - 22301074;30032202 116902543 MODEL JAAIVD010000025;XM_032905030 XP_032760921 serine protease inhibitor Kazal-type 4 protein-coding 625995230 Cacng4 calcium voltage-gated channel auxiliary subunit gamma 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); regulation of AMPA receptor activity (ortholog); response to cocaine (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell body (ortholog); cell surface (ortholog) 9 71337694 71397750 + 22301074;30032202 116908948 MODEL JAAIVD010000002;XM_032912409 XP_032768300 voltage-dependent calcium channel gamma-4 subunit protein-coding 625995238 LOC116900268 olfactory receptor 5M8-like 5 63284349 63285332 + 22301074;30032202 116900268 MODEL JAAIVD010000023;XM_032902021 XP_032757912 protein-coding 625995241 Syde2 synapse defective Rho GTPase homolog 2 INVOLVED IN cell migration (ortholog) 3 14877239 14908333 - 22301074 116896175 MODEL JAAIVD010000012;XM_032897213 XP_032753104 rho GTPase-activating protein SYDE2 protein-coding 625995252 LOC116904422 interferon-induced transmembrane protein 2-like 6 108645884 108646328 + 116904422 MODEL JAAIVD010000024 pseudo 625995253 Fzd5 frizzled class receptor 5 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior axis specification, embryo (ortholog); apoptotic process involved in morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); coloboma (ortholog); COVID-19 (ortholog); FOUND IN bicellular tight junction (ortholog); cell surface (ortholog); early endosome (ortholog) 4 138618174 138621287 - 22301074;30032202 116899454 MODEL JAAIVD010000003;XM_032901232 XP_032757123 frizzled-5 protein-coding 625995258 Arid5a AT-rich interaction domain 5A ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); chondrocyte differentiation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 112525147 112538065 + 30032202 116899286 MODEL JAAIVD010000003;XM_032900918 XP_032756809 AT-rich interactive domain-containing protein 5A protein-coding 625995269 LOC116903790 submandibular gland secretory Glx-rich protein CA-like 6 17067045 17072874 - 116903790 MODEL JAAIVD010000024;XM_032906483 XP_032762374 protein-coding 625995273 C2cd2l C2CD2 like ENCODES a protein that exhibits insulin binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasmic side of apical plasma membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 38867573 38878047 - 30032202 116906778 MODEL JAAIVD010000027;XM_032909624;XM_032909625;XM_032909627;XM_032909628;XM_032909629 XP_032765515;XP_032765516;XP_032765518;XP_032765519;XP_032765520 phospholipid transfer protein C2CD2L protein-coding 625995303 LOC116895903 filaggrin-2-like 3 120511890 120524535 + 22301074;30032202 116895903 MODEL JAAIVD010000012;XM_032896986 XP_032752877 protein-coding 625995314 Pgc progastricsin ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of antibacterial peptide production (ortholog); FOUND IN extracellular space (ortholog) 4 82142680 82150222 - 22301074;30032202 116898040 MODEL JAAIVD010000003;XM_032899432 XP_032755323 gastricsin protein-coding 625995326 LOC116905379 serine protease inhibitor A3F-like 7 115257041 115266338 + 30032202 116905379 MODEL JAAIVD010000026;XM_032908317 XP_032764208 protein-coding 625995333 Abraxas1 abraxas 1, BRCA1 A complex subunit ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN double-strand break repair (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of DNA repair (ortholog); ASSOCIATED WITH breast cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN BRCA1-A complex (ortholog); nuclear body (ortholog); nucleus (ortholog) 11 11030555 11043820 - 30032202 116912148 MODEL JAAIVD010000006;XM_032916062 XP_032771953 BRCA1-A complex subunit Abraxas 1 protein-coding 625995346 LOC116898447 protein arginine N-methyltransferase 1-like 4 96359560 96360748 + 116898447 MODEL JAAIVD010000003 pseudo 625995347 LOC116887895 ADP-ribosylation factor-related protein 1-like X 51548666 51549293 - 22301074;30032202 116887895 MODEL JAAIVD010000014;XM_032889374 XP_032745265 protein-coding 625995351 Fndc10 fibronectin type III domain containing 10 1 4934439 4936418 - 116891684 MODEL JAAIVD010000025;XM_032892950 XP_032748841 fibronectin type III domain-containing protein 10 protein-coding 625995356 LOC116896497 uncharacterized LOC116896497 3 60486138 60489693 - 116896497 MODEL JAAIVD010000012;XR_004387341 ncrna 625995361 LOC116891562 uncharacterized LOC116891562 2 79740949 79742956 + 116891562 MODEL JAAIVD010000001;XR_004386846 ncrna 625995365 LOC116893487 DNA-directed RNA polymerase III subunit RPC7-like 2 181853257 181885387 - 116893487 MODEL JAAIVD010000001 pseudo 625995366 Syce1l synaptonemal complex central element protein 1 like FOUND IN intermediate filament cytoskeleton (ortholog) 17 33306329 33316799 + 22301074;30032202 116886246 MODEL JAAIVD010000011;XM_032887658 XP_032743549 synaptonemal complex central element protein 1-like protein-coding 625995381 LOC116883232 glyceraldehyde-3-phosphate dehydrogenase-like 14 57613149 57613683 + 116883232 MODEL JAAIVD010000009 pseudo 625995382 Plcb2 phospholipase C beta 2 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phospholipase C activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Moebius syndrome (ortholog); thrombocytopenia (ortholog); FOUND IN cytoplasm (ortholog); G-protein beta/gamma-subunit complex (ortholog); neuronal dense core vesicle (ortholog) 5 96863183 96882661 - 22301074;30032202 116901784 MODEL JAAIVD010000023;XM_032903928 XP_032759819 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 protein-coding 625995418 Clic6 chloride intracellular channel 6 ENCODES a protein that exhibits chloride channel activity (ortholog); D2 dopamine receptor binding (ortholog); D3 dopamine receptor binding (ortholog); ASSOCIATED WITH myoepithelioma (ortholog) 4 52079095 52121868 - 30032202 116898978 MODEL JAAIVD010000003;XM_032900404 XP_032756295 chloride intracellular channel protein 6 protein-coding 625995428 LOC116903645 elongin-B-like 6 151238192 151238632 - 22301074;30032202 116903645 MODEL JAAIVD010000024;XM_032906305 XP_032762196 protein-coding 625995431 LOC116903616 developmental pluripotency-associated protein 4-like 6 108066302 108066949 + 116903616 MODEL JAAIVD010000024 pseudo 625995432 Safb scaffold attachment factor B ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); hormone metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN midbody (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 87960448 87981018 + 22301074;30032202 116899185 MODEL JAAIVD010000003;XM_032900765 XP_032756656 scaffold attachment factor B1 protein-coding 625995457 LOC116892633 cytochrome c, somatic-like 2 174422479 174422798 - 116892633 MODEL JAAIVD010000001 pseudo 625995458 Ip6k1 inositol hexakisphosphate kinase 1 ENCODES a protein that exhibits inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); phosphatidylinositol phosphate biosynthetic process (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 8 99333604 99377286 + 22301074;30032202 116907563 MODEL JAAIVD010000027;XM_032910587 XP_032766478 protein-coding 625995468 LOC116895876 Golgi apparatus membrane protein TVP23 homolog B-like 3 106250764 106251331 + 30032202 116895876 MODEL JAAIVD010000012;XM_032896973 XP_032752864 protein-coding 625995471 Tmem82 transmembrane protein 82 1 16529697 16533879 + 116893304 MODEL JAAIVD010000025;XM_032895134 XP_032751025 protein-coding 625995481 LOC116909471 apoptosis regulator BAX-like 9 60887503 60888154 + 30032202 116909471 MODEL JAAIVD010000002;XM_032913059 XP_032768950 protein-coding 625995486 Rpl17 ribosomal protein L17 ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); response to amino acid starvation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN A band (ortholog); cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog) 15 56980554 56983676 - 2069571;22301074;30032202 116884494 MODEL JAAIVD010000010;X58389;XM_032885616 CAA41278;XP_032741507 60S ribosomal protein L17 protein-coding 625995497 LOC116900522 uncharacterized LOC116900522 5 83217715 83303873 + 30032202 116900522 MODEL JAAIVD010000023;XM_032902253 XP_032758144 uncharacterized protein LOC116900522 protein-coding 625995503 LOC116913299 nidogen-2-like 12 89592235 89651500 + 22301074;30032202 116913299 MODEL JAAIVD010000007;XM_032917427 XP_032773318 protein-coding 625995528 Rif1 replication timing regulatory factor 1 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA damage response (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH nemaline myopathy 2 (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); chromosome, telomeric repeat region (ortholog) 5 29864927 29913417 + 30032202 116901403 MODEL JAAIVD010000023;XM_032903279 XP_032759170 telomere-associated protein RIF1 protein-coding 625995568 Slc7a8 solute carrier family 7 member 8 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); glycine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); amino acid transport (ortholog); glycine transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cataract (ortholog); Dwarfism (ortholog); endometriosis (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 12 70218879 70278800 + 22301074;30032202 116913382 MODEL JAAIVD010000007;XM_032917557;XM_032917558 XP_032773448;XP_032773449 large neutral amino acids transporter small subunit 2 protein-coding 625995585 LOC116895730 60S ribosomal protein L35-like 3 107956176 107956527 - 116895730 MODEL JAAIVD010000012 pseudo 625995586 LOC116907351 melanoma-associated antigen 11-like 8 34622319 34623109 + 116907351 MODEL JAAIVD010000027 pseudo 625995587 Ess2 ess-2 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); nervous system development (ortholog); ASSOCIATED WITH DiGeorge syndrome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nucleus (ortholog) 4 3165453 3176313 - 30032202 116898655 MODEL JAAIVD010000003;XM_032899886;XM_032899887;XM_032899888 XP_032755777;XP_032755778;XP_032755779 ess-2 splicing factor homolog;splicing factor ESS-2 homolog protein-coding 625995606 Tbc1d7 TBC1 domain family member 7 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to starvation (ortholog); negative regulation of cilium assembly (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Macrocephaly/Megalencephaly Syndrome, Autosomal Recessive (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 14 62166747 62182701 - 30032202 116883698 MODEL JAAIVD010000009;XM_032884911;XM_032884912 XP_032740802;XP_032740803 protein-coding 625995618 LOC116905689 G/T mismatch-specific thymine DNA glycosylase-like 7 35109211 35110384 + 116905689 MODEL JAAIVD010000026 pseudo 625995619 LOC116912946 U8 small nucleolar RNA 11 72470637 72470758 - 116912946 MODEL JAAIVD010000006;XR_004389514 snorna 625995622 Apoe apolipoprotein E ENCODES a protein that exhibits amyloid-beta binding (ortholog); antioxidant activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); amyloid precursor protein metabolic process (ortholog); artery development (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; lipoprotein metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); age related macular degeneration 1 (ortholog); FOUND IN cell surface (ortholog); chylomicron (ortholog); chylomicron remnant (ortholog) 2 170917865 170920679 + 22301074;30032202 116892513 P0DUZ8 MODEL JAAIVD010000001;XM_032894267;XM_032894268 XP_032750158;XP_032750159 protein-coding 625995633 LOC116889057 collagen alpha-1(I) chain-like X 22986100 23010595 - 116889057 MODEL JAAIVD010000014;XM_032890246 XP_032746137 protein-coding 625995639 Tsen15 tRNA splicing endonuclease subunit 15 PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); pontocerebellar hypoplasia type 2F (ortholog) 10 31836330 31851479 - 22301074 116911454 MODEL JAAIVD010000005;XM_032915424 XP_032771315 tRNA-splicing endonuclease subunit Sen15 protein-coding 625995648 Prpf31 pre-mRNA processing factor 31 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); ribonucleoprotein complex localization (ortholog); snoRNA localization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN Cajal body (ortholog); MLL1 complex (ortholog); nuclear speck (ortholog) 2 178219828 178231728 + 30032202 116892696 MODEL JAAIVD010000001;XM_032894552 XP_032750443 U4/U6 small nuclear ribonucleoprotein Prp31 protein-coding 625995666 LOC116904311 uncharacterized protein KIAA1257-like 6 58596449 58611065 + 116904311 MODEL JAAIVD010000024;XM_032907226 XP_032763117 protein-coding 625995674 Dsc2 desmocollin 2 INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cardiac muscle cell-cardiac muscle cell adhesion (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); FOUND IN adherens junction (ortholog); cytoplasmic vesicle (ortholog); desmosome (ortholog) 15 23462886 23494844 + 22301074;30032202 116884640 MODEL JAAIVD010000010;XM_032885781;XM_032885782 XP_032741672;XP_032741673 desmocollin-2 protein-coding 625995699 Hdac8 histone deacetylase 8 ENCODES a protein that exhibits chromatin binding (ortholog); deacetylase activity (ortholog); histone deacetylase activity (ortholog); INVOLVED IN cellular response to forskolin (ortholog); cellular response to trichostatin A (ortholog); mitotic sister chromatid cohesion (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); atrial heart septal defect (ortholog); Cardiomegaly (ortholog) X 60067299 60476138 - 22301074 116888549 MODEL JAAIVD010000014;XM_032889857 XP_032745748 protein-coding 625995714 LOC116895599 heat shock protein HSP 90-beta-like 3 153813257 153815360 - 116895599 MODEL JAAIVD010000012 pseudo 625995715 LOC116899940 U2 spliceosomal RNA 4 112942574 112942680 - 116899940 MODEL JAAIVD010000003 pseudo 625995716 Ddb2 damage specific DNA binding protein 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); protein-containing complex binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH genetic disease (ortholog); ovarian cancer (ortholog); xeroderma pigmentosum (ortholog); FOUND IN cell junction (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 5 65376421 65398759 - 22301074;30032202 116901615 MODEL JAAIVD010000023;XM_032903659;XM_032903660;XM_032903661;XM_032903662 XP_032759550;XP_032759551;XP_032759552;XP_032759553 DNA damage-binding protein 2 protein-coding 625995734 Tm4sf19 transmembrane 4 L six family member 19 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); FOUND IN actin cytoskeleton (ortholog); filopodium (ortholog) 4 17214733 17226958 + 22301074;30032202 116898773 MODEL JAAIVD010000003;XM_032900109 XP_032756000 transmembrane 4 L6 family member 19 protein-coding 625995744 LOC116888279 uncharacterized LOC116888279 X 32693034 32696604 - 116888279 MODEL JAAIVD010000014;XR_004386300 ncrna 625995748 LOC116896790 mRNA turnover protein 4 homolog 1 86704262 86708752 - 116896790 MODEL JAAIVD010000025 pseudo 625995749 B3gat3 beta-1,3-glucuronyltransferase 3 ENCODES a protein that exhibits glucuronosyltransferase activity (ortholog); protein phosphatase activator activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); Larsen-like syndrome B3GAT3 type (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi apparatus (ortholog) 2 9014976 9021579 - 22301074;30032202 116890915 MODEL JAAIVD010000001;XM_032891544 XP_032747435 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 protein-coding 625995758 LOC116906509 U2 spliceosomal RNA 7 76543427 76543627 - 116906509 MODEL JAAIVD010000026 pseudo 625995759 LOC116900653 poly(rC)-binding protein 2-like 5 118357776 118358985 + 116900653 MODEL JAAIVD010000023 pseudo 625995760 LOC116903178 60S ribosomal protein L10a-like 6 15720442 15721118 + 116903178 MODEL JAAIVD010000024 pseudo 625995761 LOC116889383 vitamin K epoxide reductase complex subunit 1-like protein 1 X 72017038 72017423 - 116889383 MODEL JAAIVD010000014 pseudo 625995762 LOC116897643 U2 spliceosomal RNA 3 79874851 79875014 + 116897643 MODEL JAAIVD010000012 pseudo 625995763 LOC116893659 membrane-spanning 4-domains subfamily A member 6D-like 2 11273043 11274562 + 116893659 MODEL JAAIVD010000001 pseudo 625995764 LOC116890593 small nucleolar RNA SNORA17 1 80119929 80120055 + 116890593 MODEL JAAIVD010000025;XR_004386750 snorna 625995767 LOC116889899 olfactory receptor 2AP1-like 1 160022247 160023182 + 22301074;30032202 116889899 MODEL JAAIVD010000025;XM_032890722 XP_032746613 protein-coding 625995770 LOC116899961 acidic leucine-rich nuclear phosphoprotein 32 family member A-like 5 53702414 53703081 + 30032202 116899961 MODEL JAAIVD010000023;XM_032901793 XP_032757684 protein-coding 625995773 LOC116900962 sodium/nucleoside cotransporter 2-like 5 100595607 100624498 + 22301074;30032202 116900962 MODEL JAAIVD010000023;XM_032902594 XP_032758485 protein-coding 625995795 LOC116888137 zinc finger protein ZPR1-like X 107215918 107220603 - 116888137 MODEL JAAIVD010000014 pseudo 625995796 LOC116907454 protein CCSMST1-like 1 163812898 163813300 + 116907454 MODEL JAAIVD010000025 pseudo 625995797 LOC116894133 olfactory receptor 52E8 2 103971580 103972530 - 22301074 116894133 MODEL JAAIVD010000001;XM_032895851 XP_032751742 protein-coding 625995800 Mep1b meprin A subunit beta ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); protein domain specific binding (ortholog); FOUND IN membrane (ortholog); meprin A complex (ortholog); plasma membrane (ortholog) 15 22388035 22415145 + 22301074;30032202 116884595 MODEL JAAIVD010000010;XM_032885735 XP_032741626 protein-coding 625995819 LOC116884903 tumor protein D52-like 15 3773629 3774610 - 116884903 MODEL JAAIVD010000010 pseudo 625995820 Hnrnpul1 heterogeneous nuclear ribonucleoprotein U like 1 ENCODES a protein that exhibits enzyme binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 2 169040068 169075185 + 22301074 116892447 MODEL JAAIVD010000001;XM_032894149;XM_032894150;XM_032894151;XM_032894152 XP_032750040;XP_032750041;XP_032750042;XP_032750043 heterogeneous nuclear ribonucleoprotein U-like protein 1 protein-coding 625995847 Il17rc interleukin 17 receptor C ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-17 receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN defense response to fungus (ortholog); granulocyte chemotaxis (ortholog); interleukin-17A-mediated signaling pathway (ortholog); ASSOCIATED WITH Candidiasis, Familial, 9 (ortholog); Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 6 33052123 33064025 - 30032202 116903410 MODEL JAAIVD010000024;XM_032905925;XM_032905926 XP_032761816;XP_032761817 interleukin-17 receptor C protein-coding 625995872 Ube2g1 ubiquitin conjugating enzyme E2 G1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); protein K63-linked ubiquitination (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; ubiquitin/proteasome degradation pathway 9 42826199 42908295 - 30032202 116910416 MODEL JAAIVD010000002;XM_032914260 XP_032770151 ubiquitin-conjugating enzyme E2 G1 protein-coding 625995882 LOC116899259 uncharacterized LOC116899259 4 101721281 101828335 - 116899259 MODEL JAAIVD010000003;XR_004387701 ncrna 625995889 LOC116895278 14-3-3 protein theta-like 3 6673985 6674576 - 116895278 MODEL JAAIVD010000012 pseudo 625995890 Snapc1 small nuclear RNA activating complex polypeptide 1 PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 7 88222910 88244893 + 30032202 116905166 MODEL JAAIVD010000026;XM_032907942 XP_032763833 snRNA-activating protein complex subunit 1 protein-coding 625995904 LOC116895951 60S ribosomal protein L19-like 3 136960353 136961043 + 116895951 MODEL JAAIVD010000012 pseudo 625995905 LOC116908584 coronin-7 9 17209510 17275302 + 22301074;30032202 116908584 MODEL JAAIVD010000002;XM_032911800;XM_032911801 XP_032767691;XP_032767692 mitochondrial import inner membrane translocase subunit TIM16 protein-coding 625995943 Klk10 kallikrein related peptidase 10 ASSOCIATED WITH Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); ovarian cancer (ortholog) 2 155607924 155611300 - 22301074 116893334 MODEL JAAIVD010000001;XM_032895148 XP_032751039 kallikrein-10 protein-coding 625995951 LOC116895058 U2 spliceosomal RNA 2 188252095 188252220 + 116895058 MODEL JAAIVD010000001 pseudo 625995952 LOC116907281 olfactory receptor 7G1-like 8 75738307 75739249 - 116907281 MODEL JAAIVD010000027 pseudo 625995953 Arpc3 actin related protein 2/3 complex subunit 3 ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); cellular response to nerve growth factor stimulus (ortholog); regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH diabetes mellitus (ortholog); Parkinson's disease (ortholog); FOUND IN Arp2/3 protein complex (ortholog); cell leading edge (ortholog); filamentous actin (ortholog) 16 31448934 31463617 - 22301074;30032202 116885525 MODEL JAAIVD010000004;XM_032886822 XP_032742713 actin-related protein 2/3 complex subunit 3 protein-coding 625995964 LOC116914310 cytochrome P450 2D3 1 252150681 252155294 - 22301074;30032202 116914310 MODEL JAAIVD010000025;XM_032918549 XP_032774440 protein-coding 625995976 LOC116901057 basic leucine zipper and W2 domain-containing protein 1-like 5 139172883 139194967 + 116901057 MODEL JAAIVD010000023 pseudo 625995977 Efhc1 EF-hand domain containing 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN cerebral cortex cell migration (ortholog); flagellated sperm motility (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); childhood absence epilepsy (ortholog); epilepsy (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 4 98325146 98364666 + 22301074;30032202 116898105 MODEL JAAIVD010000003;XM_032899490 XP_032755381 EF-hand domain-containing protein 1 protein-coding 625995992 LOC116895971 glyceraldehyde-3-phosphate dehydrogenase-like 3 155268379 155268775 - 116895971 MODEL JAAIVD010000012 pseudo 625995993 LOC116901640 paralemmin-2 1 93875716 94154276 - 22301074 116901640 MODEL JAAIVD010000025;XM_032903739;XM_032903747 XP_032759630;XP_032759638 protein-coding 625996007 LOC116894278 vomeronasal type-1 receptor 4-like 2 121640664 121641634 + 22301074;30032202 116894278 MODEL JAAIVD010000001;XM_032895990 XP_032751881 protein-coding 625996011 LOC116895816 60S ribosomal protein L19-like 3 73518534 73519119 + 116895816 MODEL JAAIVD010000012 pseudo 625996012 LOC116912787 cytochrome c, somatic-like 11 55835123 55835438 - 116912787 MODEL JAAIVD010000006 pseudo 625996013 LOC116900204 cytochrome P450 2J2-like 1 59070173 59107500 - 22301074;30032202 116900204 MODEL JAAIVD010000025;XM_032901962 XP_032757853 protein-coding 625996024 LOC116901538 60S ribosomal protein L10-like 5 53058043 53059909 - 22301074;30032202 116901538 MODEL JAAIVD010000023;XM_032903521 XP_032759412 protein-coding 625996029 Nhsl2 NHS like 2 ASSOCIATED WITH X-linked spinocerebellar ataxia 1 (ortholog) X 59869125 59881214 + 30032202 116887929 MODEL JAAIVD010000014;XM_032889394 XP_032745285 NHS-like protein 2 protein-coding 625996039 LOC116902576 small nucleolar RNA SNORA17 5 10174729 10174860 + 116902576 MODEL JAAIVD010000023;XR_004388169 snorna 625996042 LOC116909037 keratin, type I cuticular Ha3-I 9 54756435 54760860 - 22301074;30032202 116909037 MODEL JAAIVD010000002;XM_032912518 XP_032768409 protein-coding 625996052 LOC116899231 actin, cytoplasmic 2-like 4 91310328 91311437 - 116899231 MODEL JAAIVD010000003 pseudo 625996053 LOC116888662 L-lactate dehydrogenase A chain-like X 98643362 98644533 - 116888662 MODEL JAAIVD010000014 pseudo 625996054 Lamtor1 late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 2 100200259 100205961 + 22301074;30032202 116891773 MODEL JAAIVD010000001;XM_032893103 XP_032748994 ragulator complex protein LAMTOR1 protein-coding 625996063 Abcc5 ATP binding cassette subfamily C member 5 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); carbohydrate derivative transmembrane transporter activity (ortholog); INVOLVED IN cAMP transport (ortholog); cGMP transport (ortholog); export across plasma membrane (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); pancreatic cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 4 5176283 5268396 - 22301074;30032202 116898690 MODEL JAAIVD010000003;XM_032899948 XP_032755839 multidrug resistance-associated protein 5 protein-coding 625996097 LOC116892765 guanine nucleotide-binding protein G(i) subunit alpha-2-like 2 182678608 182679617 - 116892765 MODEL JAAIVD010000001 pseudo 625996098 LOC116911589 uncharacterized LOC116911589 10 51635741 51637095 + 116911589 MODEL JAAIVD010000005;XR_004389330 ncrna 625996102 LOC116907740 olfactory receptor 145-like 8 31586972 31587916 + 22301074;30032202 116907740 MODEL JAAIVD010000027;XM_032910877 XP_032766768 protein-coding 625996105 LOC116910637 U6 spliceosomal RNA 9 83708927 83709033 + 116910637 MODEL JAAIVD010000002;XR_004389175 snrna 625996108 Bend4 BEN domain containing 4 ASSOCIATED WITH ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED, 3 (ortholog); lung non-small cell carcinoma (ortholog) 11 24503776 24534584 - 22301074 116912679 MODEL JAAIVD010000006;XM_032916796 XP_032772687 BEN domain-containing protein 4 protein-coding 625996117 Slc12a1 solute carrier family 12 member 1 ENCODES a protein that exhibits protein serine/threonine kinase binding (ortholog); sodium:potassium:chloride symporter activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic salinity response (ortholog); chloride transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Bartter disease (ortholog); Bartter disease type 1 (ortholog); Bartter disease type 3 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); extracellular exosome (ortholog) 5 103465663 103559989 + 22301074;30032202 116900611 MODEL JAAIVD010000023;XM_032902328;XM_032902329;XM_032902330 XP_032758219;XP_032758220;XP_032758221 protein-coding 625996153 LOC116904771 small nucleolar RNA SNORA17 6 30985542 30985646 + 116904771 MODEL JAAIVD010000024 pseudo 625996154 LOC116895657 phosphoglycerate kinase 1-like 3 185884803 185886111 - 22301074;30032202 116895657 MODEL JAAIVD010000012;XM_032896864 XP_032752755 protein-coding 625996159 Lyrm2 LYR motif containing 2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); FOUND IN mitochondrion (ortholog) 1 110232543 110234853 - 30032202 116902361 MODEL JAAIVD010000025;XM_032904859 XP_032760750 LYR motif-containing protein 2 protein-coding 625996166 Itgb7 integrin subunit beta 7 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); cell-matrix adhesion involved in ameboidal cell migration (ortholog); heterotypic cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; integrin mediated signaling pathway; FOUND IN cell surface (ortholog); integrin alpha4-beta7 complex (ortholog); receptor complex (ortholog) 1 260842105 260857852 + 30032202 116890195 MODEL JAAIVD010000025;XM_032890930 XP_032746821 integrin beta-7 protein-coding 625996185 LOC116906964 NXPE family member 4-like 8 42888663 42904118 + 116906964 MODEL JAAIVD010000027;XM_032909885 XP_032765776 protein-coding 625996194 LOC116910062 heterogeneous nuclear ribonucleoprotein A1-like 9 53889806 53890770 + 116910062 MODEL JAAIVD010000002 pseudo 625996195 LOC116897793 olfactory receptor 2L13-like 4 4475947 4476885 - 22301074 116897793 MODEL JAAIVD010000003;XM_032899214 XP_032755105 protein-coding 625996198 LOC116894305 SAP domain-containing ribonucleoprotein-like 2 141705038 141705838 - 116894305 MODEL JAAIVD010000001 pseudo 625996199 Skida1 SKI/DACH domain containing 1 14 5899999 5903562 + 116883651 MODEL JAAIVD010000009;XM_032884846 XP_032740737 SKI/DACH domain-containing protein 1 protein-coding 625996204 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 840192 840263 - 116910817 MODEL JAAIVD010000002 trna 625996205 Fyn FYN proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); CD4 receptor binding (ortholog); CD8 receptor binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN altered Reelin signaling pathway; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell body (ortholog); cell periphery (ortholog) 18 39161813 39369515 + 22301074;30032202 116887517 MODEL JAAIVD010000013;XM_032889140;XM_032889141 XP_032745031;XP_032745032 tyrosine-protein kinase Fyn protein-coding 625996225 Klhl21 kelch like family member 21 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN chromosome passenger complex localization to spindle midzone (ortholog); protein ubiquitination (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); polar microtubule (ortholog) 1 8722939 8731627 - 22301074 116892389 MODEL JAAIVD010000025;XM_032894060 XP_032749951 kelch-like protein 21 protein-coding 625996233 Fdps farnesyl diphosphate synthase ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); dimethylallyltranstransferase activity (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Porokeratosis 9, Multiple Types (ortholog); Postmenopausal Osteoporosis (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); nucleoplasm (ortholog) 3 64575456 64585248 + 30032202 116896668 MODEL JAAIVD010000012;XM_032898028;XM_032898030;XM_032898031 XP_032753919;XP_032753921;XP_032753922 farnesyl pyrophosphate synthase protein-coding 625996252 LOC116885976 U4 spliceosomal RNA 16 101800 101940 - 116885976 MODEL JAAIVD010000004;XR_004386057 snrna 625996255 Gars1 glycyl-tRNA synthetase 1 ENCODES a protein that exhibits bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); glycine-tRNA ligase activity (ortholog); identical protein binding (ortholog); INVOLVED IN diadenosine tetraphosphate biosynthetic process (ortholog); glycyl-tRNA aminoacylation (ortholog); tRNA aminoacylation for protein translation (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); extracellular exosome (ortholog) 6 85995703 86035485 - 22301074;30032202 116903760 MODEL JAAIVD010000024;XM_032906448 XP_032762339 glycine--tRNA ligase protein-coding 625996276 LOC116913601 40S ribosomal protein S24-like 12 70725195 70725696 + 22301074;30032202 116913601 MODEL JAAIVD010000007;XM_032917852 XP_032773743 protein-coding 625996281 LOC116900500 olfactory receptor 4A5-like 5 71961753 71962697 - 22301074 116900500 MODEL JAAIVD010000023;XM_032902235 XP_032758126 protein-coding 625996284 LOC116903593 Y-box-binding protein 1-like 6 60599461 60606961 - 116903593 MODEL JAAIVD010000024 pseudo 625996285 LOC116914385 myeloid leukemia factor 2-like 13 3024783 3025806 - 30032202 116914385 MODEL JAAIVD010000008;XM_032918600 XP_032774491 protein-coding 625996290 LOC116900185 26S proteasome non-ATPase regulatory subunit 8-like 5 38643856 38644805 - 116900185 MODEL JAAIVD010000023 pseudo 625996291 LOC116915181 U7 small nuclear RNA 13 22709922 22709983 + 116915181 MODEL JAAIVD010000008;XR_004389840 snrna 625996294 LOC116884077 small nucleolar RNA SNORA17 14 2450379 2450501 + 116884077 MODEL JAAIVD010000009 pseudo 625996295 LOC116895037 small nucleolar RNA SNORA17 2 102677698 102677828 - 116895037 MODEL JAAIVD010000001;XR_004387223 snorna 625996298 LOC116909199 60S ribosomal protein L9-like 9 5857851 5858499 + 116909199 MODEL JAAIVD010000002 pseudo 625996299 LOC116893060 proteasome subunit alpha type-5-like 2 34669811 34672493 - 116893060 MODEL JAAIVD010000001 pseudo 625996300 LOC116908347 small nucleolar RNA SNORD18 8 58480958 58481028 + 116908347 MODEL JAAIVD010000027;XR_004388898 snorna 625996303 Idh3a isocitrate dehydrogenase (NAD(+)) 3 catalytic subunit alpha ENCODES a protein that exhibits isocitrate dehydrogenase (NAD+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH fundus dystrophy (ortholog); osteoarthritis (ortholog); retinitis pigmentosa (ortholog); FOUND IN isocitrate dehydrogenase complex (NAD+) (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 48652955 48672318 + 22301074;30032202 116908294 MODEL JAAIVD010000027;XM_032911557;XM_032911558 XP_032767448;XP_032767449 isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial protein-coding 625996322 LOC116902562 small nucleolar RNA SNORA48 5 97224352 97224484 - 116902562 MODEL JAAIVD010000023 pseudo 625996323 Pabpc1 poly(A) binding protein cytoplasmic 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); poly(A) binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); PARTICIPATES IN microRNA pathway; translation initiation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); intellectual disability (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) 1 210123454 210137250 - 22301074;30032202 116910607 MODEL JAAIVD010000025;XM_032914554 XP_032770445 polyadenylate-binding protein 1 protein-coding 625996342 LOC116884379 60S acidic ribosomal protein P0-like 15 52040751 52063793 - 116884379 MODEL JAAIVD010000010 pseudo 625996343 LOC116897387 U6 spliceosomal RNA 3 124828723 124828829 + 116897387 MODEL JAAIVD010000012;XR_004387431 snrna 625996346 LOC116910073 CMRF-35-like molecule 4 9 69222591 69227050 + 30032202 116910073 MODEL JAAIVD010000002;XM_032913888 XP_032769779 protein-coding 625996352 LOC116910903 eukaryotic translation initiation factor 4E-like 10 48790993 48800363 - 116910903 MODEL JAAIVD010000005 pseudo 625996353 LOC116914892 uncharacterized LOC116914892 13 27408491 27424935 - 116914892 MODEL JAAIVD010000008;XR_004389787 ncrna 625996358 Gjb1 gap junction protein beta 1 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN epididymis development (ortholog); purine ribonucleotide transport (ortholog); ASSOCIATED WITH adenoma (ortholog); autoimmune thyroiditis (ortholog); cerebellar ataxia (ortholog); FOUND IN cytoplasm (ortholog); gap junction (ortholog); lateral plasma membrane (ortholog) X 59162623 59170198 - 22301074;30032202 116889108 MODEL JAAIVD010000014;XM_032890274 XP_032746165 gap junction beta-1 protein protein-coding 625996364 Frmd4a FERM domain containing 4A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of epithelial cell polarity (ortholog); negative regulation of protein secretion (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH CORPUS CALLOSUM, AGENESIS OF, WITH FACIAL ANOMALIES AND CEREBELLAR ATAXIA (ortholog); microcephaly (ortholog); substance-related disorder (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog) 14 10654245 10968644 + 22301074;30032202 116883371 MODEL JAAIVD010000009;XM_032884486;XM_032884487 XP_032740377;XP_032740378 FERM domain-containing protein 4A protein-coding 625996396 Fscn2 fascin actin-bundling protein 2, retinal INVOLVED IN eye photoreceptor cell development (ortholog); ASSOCIATED WITH auditory system disease (ortholog); fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); FOUND IN actin cytoskeleton (ortholog); stereocilium (ortholog) 9 63653996 63660010 - 22301074;30032202 116908785 MODEL JAAIVD010000002;XM_032912171;XM_032912172 XP_032768062;XP_032768063 fascin-2 protein-coding 625996411 Tomm5 translocase of outer mitochondrial membrane 5 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) 1 1400463 1403292 + 30032202 116890809 MODEL JAAIVD010000025;XM_032891307 XP_032747198 mitochondrial import receptor subunit TOM5 homolog protein-coding 625996417 LOC116886174 60S ribosomal protein L35a-like 17 43408892 43410123 + 116886174 MODEL JAAIVD010000011 pseudo 625996418 Tmem42 transmembrane protein 42 8 114161224 114164192 + 116908014 MODEL JAAIVD010000027;XM_032911273 XP_032767164 protein-coding 625996425 Pold4 DNA polymerase delta 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of endothelial cell proliferation (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleus (ortholog) 2 3409142 3410884 - 22301074;30032202 116890775 MODEL JAAIVD010000001;XM_032891242 XP_032747133 DNA polymerase delta subunit 4 protein-coding 625996433 LOC116888471 zinc finger protein 280C-like X 109866239 109873872 + 116888471 MODEL JAAIVD010000014;XM_032889752 XP_032745643 protein-coding 625996443 LOC116904768 small nucleolar RNA SNORA17 6 75895859 75895960 + 116904768 MODEL JAAIVD010000024 pseudo 625996444 LOC116910968 beta-arrestin-1-like 10 88432212 88433440 - 116910968 MODEL JAAIVD010000005 pseudo 625996445 Acsm5 acyl-CoA synthetase medium chain family member 5 FOUND IN mitochondrion (ortholog) 2 82124137 82147415 - 30032202 116891600 MODEL JAAIVD010000001;XM_032892792 XP_032748683 acyl-coenzyme A synthetase ACSM5, mitochondrial protein-coding 625996464 LOC116889053 isocitrate dehydrogenase [NAD] subunit beta, mitochondrial-like 1 235380976 235382042 + 116889053 MODEL JAAIVD010000025 pseudo 625996465 B3galt2 beta-1,3-galactosyltransferase 2 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); oligosaccharide biosynthetic process (ortholog) 10 23549343 23573674 + 22301074;30032202 116911113 MODEL JAAIVD010000005;XM_032914954;XM_032914955;XM_032914956 XP_032770845;XP_032770846;XP_032770847 protein-coding 625996478 Asb12 ankyrin repeat and SOCS box containing 12 X 53181577 53182935 + 22301074 116889113 MODEL JAAIVD010000014;XM_032890277 XP_032746168 ankyrin repeat and SOCS box protein 12 protein-coding 625996482 LOC116894416 keratin-associated protein 19-9b-like 2 158684720 158684887 - 116894416 MODEL JAAIVD010000001;XM_032896120 XP_032752011 protein-coding 625996485 LOC116906380 small nucleolar RNA SNORD113/SNORD114 family 7 127260222 127260296 + 116906380 MODEL JAAIVD010000026;XR_004388650 snorna 625996488 LOC116906515 U4 spliceosomal RNA 7 11350375 11350517 - 116906515 MODEL JAAIVD010000026;XR_004388741 snrna 625996491 LOC116897657 U4 spliceosomal RNA 3 119982392 119982583 - 116897657 MODEL JAAIVD010000012 pseudo 625996492 Sypl2 synaptophysin like 2 INVOLVED IN heart development (ortholog); intracellular calcium ion homeostasis (ortholog); substantia nigra development (ortholog) 3 50030786 50045665 + 22301074;30032202 116895362 MODEL JAAIVD010000012;XM_032896660 XP_032752551 synaptophysin-like protein 2 protein-coding 625996502 LOC116910705 small nucleolar RNA SNORA48 9 42805079 42805220 + 116910705 MODEL JAAIVD010000002;XR_004389232 snorna 625996505 Tlx2 T cell leukemia homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN enteric nervous system development (ortholog); mesoderm formation (ortholog); negative regulation of dendrite morphogenesis (ortholog); ASSOCIATED WITH intestinal pseudo-obstruction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 63154773 63156711 + 22301074;30032202 116902753 MODEL JAAIVD010000024;XM_032905098 XP_032760989 T-cell leukemia homeobox protein 2 protein-coding 625996512 LOC116906544 transmembrane protein 198-like 1 156274141 156278445 - 30032202 116906544 MODEL JAAIVD010000025;XM_032909250 XP_032765141 protein-coding 625996520 LOC116902537 small nucleolar RNA SNORA42/SNORA80 family 5 49141504 49141617 + 116902537 MODEL JAAIVD010000023;XR_004388140 snorna 625996523 Mkrn2 makorin ring finger protein 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 31093708 31111500 - 22301074;30032202 116903380 MODEL JAAIVD010000024;XM_032905872 XP_032761763 probable E3 ubiquitin-protein ligase makorin-2 protein-coding 625996535 LOC116895064 small nucleolar RNA SNORA17 2 117291033 117291162 - 116895064 MODEL JAAIVD010000001;XR_004387239 snorna 625996538 Lipc lipase C, hepatic type ENCODES a protein that exhibits acetylesterase activity (ortholog); acyltransferase activity (ortholog); apolipoprotein binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to hormone stimulus (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular space (ortholog) 8 65155676 65281061 - 22301074;30032202 116907009 MODEL JAAIVD010000027;XM_032909942 XP_032765833 hepatic triacylglycerol lipase protein-coding 625996551 Abracl ABRA C-terminal like 2 218867407 218877720 + 30032202 116892992 MODEL JAAIVD010000001;XM_032894956 XP_032750847 costars family protein ABRACL protein-coding 625996558 Cep89 centrosomal protein 89 INVOLVED IN cilium assembly (ortholog); mitochondrial cytochrome c oxidase assembly (ortholog); non-motile cilium assembly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 163225687 163267202 - 30032202 116892266 MODEL JAAIVD010000001;XM_032893853 XP_032749744 centrosomal protein of 89 kDa protein-coding 625996581 Rragc Ras related GTP binding C ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH follicular lymphoma (ortholog); genetic disease (ortholog); LONG-OLSEN-DISTELMAIER SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) 1 34373682 34392655 - 22301074;30032202 116896923 MODEL JAAIVD010000025;XM_032898492 XP_032754383 ras-related GTP-binding protein C protein-coding 625996592 Spata31h1 SPATA31 subfamily H member 1 7 22716024 22726781 - 30032202 116905633 MODEL JAAIVD010000026;XM_032908613 XP_032764504 C7H2orf16 chromosome 7 C2orf16 homolog;uncharacterized protein C2orf16 homolog protein-coding 625996598 Txndc17 thioredoxin domain containing 17 ENCODES a protein that exhibits peroxidase activity (ortholog); protein-disulfide reductase [NAD(P)H] activity (ortholog); INVOLVED IN tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN cytosol (ortholog) 9 43300013 43302255 - 30032202 116910232 MODEL JAAIVD010000002;XM_032914123 XP_032770014 thioredoxin domain-containing protein 17 protein-coding 625996606 Plin1 perilipin 1 INVOLVED IN cellular response to cold (ortholog); lipid catabolic process (ortholog); negative regulation of lipid catabolic process (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 4 (ortholog); FOUND IN cell periphery (ortholog); cytosol (ortholog); lipid droplet (ortholog) 2 120513622 120524852 + 30032202 116891937 MODEL JAAIVD010000001;XM_032893379 XP_032749270 perilipin-1 protein-coding 625996618 LOC116892503 zinc finger protein 431-like 1 26625586 26627915 - 116892503 MODEL JAAIVD010000025 pseudo 625996619 Zscan10 zinc finger and SCAN domain containing 10 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH OTOFACIAL NEURODEVELOPMENTAL SYNDROME (ortholog); sensorineural hearing loss (ortholog); FOUND IN nucleus (ortholog) 9 917512 926773 + 30032202 116910060 MODEL JAAIVD010000002;XM_032913871 XP_032769762 zinc finger and SCAN domain-containing protein 10 protein-coding 625996629 LOC116910701 small nucleolar RNA SNORA48 9 29417183 29417321 + 116910701 MODEL JAAIVD010000002;XR_004389229 snorna 625996632 LOC116887884 melanoma-associated antigen B4-like X 49879345 49880280 + 116887884 MODEL JAAIVD010000014 pseudo 625996633 Ltbp3 latent transforming growth factor beta binding protein 3 ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone remodeling (ortholog); lung saccule development (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); anodontia (ortholog); bone disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 2 1936248 1952446 - 22301074 116890694 MODEL JAAIVD010000001;XM_032891112;XM_032891113 XP_032747003;XP_032747004 latent-transforming growth factor beta-binding protein 3 protein-coding 625996668 LOC116910498 serine protease 29-like 9 2597518 2599535 + 22301074 116910498 MODEL JAAIVD010000002;XM_032914390 XP_032770281 protein-coding 625996675 Lrp12 LDL receptor related protein 12 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); integrin activation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 28 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN plasma membrane (ortholog) 1 213196098 213267597 - 30032202 116910905 MODEL JAAIVD010000025;XM_032914670 XP_032770561 low-density lipoprotein receptor-related protein 12 protein-coding 625996686 Znrf3 zinc and ring finger 3 ENCODES a protein that exhibits frizzled binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of non-canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); pancreatic cancer (ortholog); FOUND IN plasma membrane (ortholog) 11 74246164 74392878 - 30032202 116912869 MODEL JAAIVD010000006;XM_032917090 XP_032772981 E3 ubiquitin-protein ligase ZNRF3 protein-coding 625996698 LOC116913857 vesicle transport protein SFT2B-like 12 87932651 87935848 - 116913857 MODEL JAAIVD010000007 pseudo 625996699 LOC116891763 T-cell ecto-ADP-ribosyltransferase 2-like 2 99859525 99862932 - 116891763 MODEL JAAIVD010000001 pseudo 625996700 Actr2 actin related protein 2 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal protein binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); associative learning (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); colorectal carcinoma (ortholog); intellectual disability (ortholog); FOUND IN actin cap (ortholog); Arp2/3 protein complex (ortholog); cell cortex (ortholog) 11 88333762 88377909 - 30032202 116911933 MODEL JAAIVD010000006;XM_032915825 XP_032771716 actin-related protein 2 protein-coding 625996713 LOC116884894 60S ribosomal protein L26-like 15 322095 327184 + 116884894 MODEL JAAIVD010000010 pseudo 625996714 LOC116895498 rho GTPase-activating protein 20-like 3 104988186 105018767 - 22301074;30032202 116895498 MODEL JAAIVD010000012;XM_032896752 XP_032752643 protein-coding 625996735 LOC116894960 small nucleolar RNA SNORA23 2 91410411 91410593 - 116894960 MODEL JAAIVD010000001;XR_004387154 snorna 625996738 Stxbp5 syntaxin binding protein 5 ENCODES a protein that exhibits syntaxin binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN exocytosis (ortholog); positive regulation of exocytosis (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cytosol (ortholog); extrinsic component of neuronal dense core vesicle membrane (ortholog) 2 227168368 227311888 + 30032202 116893026 MODEL JAAIVD010000001;XM_032894986;XM_032894987;XM_032894988 XP_032750877;XP_032750878;XP_032750879 syntaxin-binding protein 5 protein-coding 625996771 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 2809496 2809568 - 116911910 MODEL JAAIVD010000005 trna 625996772 LOC116886794 U6 spliceosomal RNA 17 31573822 31573920 + 116886794 MODEL JAAIVD010000011 pseudo 625996773 LOC116906576 proline-rich protein 23A3-like 8 90226477 90227372 + 116906576 MODEL JAAIVD010000027;XM_032909310 XP_032765201 protein-coding 625996777 LOC116887906 zinc finger X-linked protein ZXDB X 53482974 53486066 + 30032202 116887906 MODEL JAAIVD010000014;XM_032889380 XP_032745271 protein-coding 625996783 LOC116887939 olfactory receptor 6A2-like X 61976986 61977522 - 116887939 MODEL JAAIVD010000014 pseudo 625996784 Sc5d sterol-C5-desaturase ENCODES a protein that exhibits C-5 sterol desaturase activity (ortholog); delta7-sterol 5(6)-desaturase activity (ortholog); sterol desaturase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Lathosterolosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 36840863 36852692 - 22301074;30032202 116906679 MODEL JAAIVD010000027;XM_032909467;XM_032909468 XP_032765358;XP_032765359 lathosterol oxidase protein-coding 625996797 Brdt bromodomain testis associated ENCODES a protein that exhibits histone binding (ortholog); histone H4 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH azoospermia (ortholog); oligospermia (ortholog); primary ovarian insufficiency (ortholog); FOUND IN nucleus (ortholog) 11 17102047 17156703 + 30032202 116912516 MODEL JAAIVD010000006;XM_032916602;XM_032916603;XM_032916604 XP_032772493;XP_032772494;XP_032772495 bromodomain testis-specific protein protein-coding 625996827 Slc51b SLC51 subunit beta ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); protein heterodimerization activity (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid secretion (ortholog); positive regulation of protein exit from endoplasmic reticulum (ortholog); ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Diabetes Complications (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 8 59720864 59723776 - 22301074 116907316 MODEL JAAIVD010000027;XM_032910261 XP_032766152 organic solute transporter subunit beta;solute carrier family 51 subunit beta protein-coding 625996834 Atp6v0d2 ATPase H+ transporting V0 subunit d2 ASSOCIATED WITH ovarian cyst (ortholog); Stomach Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); early endosome (ortholog); endosome (ortholog) 1 123830126 123877025 + 22301074;30032202 116889194 MODEL JAAIVD010000025;XM_032890356 XP_032746247 V-type proton ATPase subunit d 2 protein-coding 625996846 LOC116900488 olfactory receptor 4X1-like 5 71718716 71719645 - 22301074 116900488 MODEL JAAIVD010000023;XM_032902223 XP_032758114 protein-coding 625996849 LOC116910768 U6 spliceosomal RNA 9 29239213 29239319 - 116910768 MODEL JAAIVD010000002;XR_004389276 snrna 625996852 LOC116889196 dystrophin-like X 40898299 40935372 - 22301074;30032202 116889196 MODEL JAAIVD010000014;XM_032890354 XP_032746245 protein-coding 625996863 Nrg4 neuregulin 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN ERBB4-ERBB4 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FOUND IN extracellular space (ortholog) 8 49292369 49340538 - 30032202 116908173 MODEL JAAIVD010000027;XM_032911468 XP_032767359 pro-neuregulin-4, membrane-bound isoform protein-coding 625996871 Ctdspl2 CTD small phosphatase like 2 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); embryonic skeletal system development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 100074168 100127062 + 30032202 116901876 MODEL JAAIVD010000023;XM_032904083;XM_032904084 XP_032759974;XP_032759975 CTD small phosphatase-like protein 2 protein-coding 625996890 LOC116901100 N-acetyllactosaminide alpha-1,3-galactosyltransferase 5 164638 237226 + 22301074;30032202 116901100 MODEL JAAIVD010000023;XM_032902662;XM_032902663 XP_032758553;XP_032758554 protein-coding 625996904 Rmdn2 regulator of microtubule dynamics 2 ENCODES a protein that exhibits microtubule binding (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 7 13390187 13447243 - 30032202 116905863 MODEL JAAIVD010000026;XM_032908847;XM_032908848;XM_032908849;XM_032908850;XM_032908851 XP_032764738;XP_032764739;XP_032764740;XP_032764741;XP_032764742 regulator of microtubule dynamics protein 2 protein-coding 625996934 Gga2 golgi associated, gamma adaptin ear containing, ARF binding protein 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); protein localization to cell surface (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 2 79800874 79834343 + 22301074;30032202 116891563 MODEL JAAIVD010000001;XM_032892742 XP_032748633 ADP-ribosylation factor-binding protein GGA2 protein-coding 625996955 Spg11 SPG11 vesicle trafficking associated, spatacsin ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN autophagosome organization (ortholog); axo-dendritic transport (ortholog); axon extension (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 5 (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 5 100164257 100230360 - 30032202 116901879 MODEL JAAIVD010000023;XM_032904086 XP_032759977 spatacsin protein-coding 625996999 Dio1 iodothyronine deiodinase 1 ENCODES a protein that exhibits selenium binding (ortholog); thyroxine 5'-deiodinase activity (ortholog); thyroxine 5-deiodinase activity (ortholog); INVOLVED IN amino acid metabolic process (ortholog); thyroid hormone catabolic process (ortholog); thyroid hormone metabolic process (ortholog); ASSOCIATED WITH Abnormal Thyroid Hormone Metabolism 2 (ortholog); Experimental Liver Cirrhosis (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 47499059 47518542 + 22301074;30032202 116887561 MODEL JAAIVD010000025;XM_032889187;XM_032889191 XP_032745078;XP_032745082 type I iodothyronine deiodinase protein-coding 625997011 LOC116909853 60S ribosomal protein L37-like 9 63269084 63269375 - 116909853 MODEL JAAIVD010000002 pseudo 625997012 Emp1 epithelial membrane protein 1 INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) 6 14043337 14063107 - 30032202 116903158 MODEL JAAIVD010000024;XM_032905526 XP_032761417 protein-coding 625997021 LOC116892221 glandular kallikrein-10 2 155469359 155473418 + 22301074;30032202 116892221 MODEL JAAIVD010000001;XM_032893785;XM_032893786 XP_032749676;XP_032749677 protein-coding 625997035 Garin1a golgi associated RAB2 interactor 1A INVOLVED IN acrosome assembly (ortholog); FOUND IN Golgi apparatus (ortholog) 6 110274153 110284274 - 30032202 116902917 MODEL JAAIVD010000024;XM_032905242 XP_032761133 Fam71f2 family with sequence similarity 71 member F2;protein FAM71F2 protein-coding 625997044 LOC116883750 ATP synthase subunit gamma, mitochondrial 14 16152691 16174717 - 22301074;30032202 116883750 MODEL JAAIVD010000009;XM_032884994;XM_032884995 XP_032740885;XP_032740886 protein-coding 625997059 Crip1 cysteine rich protein 1 ENCODES a protein that exhibits peptide binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to UV-B (ortholog); immune response (ortholog); FOUND IN cytoplasm (ortholog) 7 130755484 130757458 + 30032202 116905531 MODEL JAAIVD010000026;XM_032908568 XP_032764459 cysteine-rich protein 1 protein-coding 625997068 Lrig3 leucine rich repeats and immunoglobulin like domains 3 INVOLVED IN otolith morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog) 1 204470905 204521705 + 22301074 116909712 MODEL JAAIVD010000025;XM_032913386 XP_032769277 leucine-rich repeats and immunoglobulin-like domains protein 3 protein-coding 625997091 Slc8b1 solute carrier family 8 member B1 ENCODES a protein that exhibits calcium:sodium antiporter activity (ortholog); calcium:sodium antiporter activity involved in regulation of cardiac muscle cell membrane potential (ortholog); identical protein binding (ortholog); INVOLVED IN calcium export from the mitochondrion (ortholog); calcium ion transmembrane transport (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Cerebral Hemorrhage (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 16 33294119 33317525 - 22301074;30032202 116885647 MODEL JAAIVD010000004;XM_032886954 XP_032742845 mitochondrial sodium/calcium exchanger protein protein-coding 625997111 Galnt16 polypeptide N-acetylgalactosaminyltransferase 16 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN obsolete protein O-linked glycosylation via serine (ortholog); obsolete protein O-linked glycosylation via threonine (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 7 94734428 94826522 + 30032202 116905222 MODEL JAAIVD010000026;XM_032908035;XM_032908036 XP_032763926;XP_032763927 protein-coding 625997135 Vps13a vacuolar protein sorting 13 homolog A INVOLVED IN adult locomotory behavior (ortholog); autophagy (ortholog); brain-derived neurotrophic factor receptor signaling pathway (ortholog); ASSOCIATED WITH choreaacanthocytosis (ortholog); choreatic disease (ortholog); genetic disease (ortholog); FOUND IN dense core granule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 16655182 16865619 - 30032202 116891007 MODEL JAAIVD010000001;XM_032891688 XP_032747579 vacuolar protein sorting-associated protein 13A protein-coding 625997211 LOC116889206 spindlin-2C X 13989299 13991282 + 22301074;30032202 116889206 MODEL JAAIVD010000014;XM_032890361 XP_032746252 protein-coding 625997218 LOC116887996 ATP synthase subunit epsilon, mitochondrial-like X 74343544 74347179 + 116887996 MODEL JAAIVD010000014 pseudo 625997219 LOC116901356 uncharacterized LOC116901356 5 15198041 15208867 + 116901356 MODEL JAAIVD010000023;XR_004387979 ncrna 625997224 LOC116886630 40S ribosomal protein S2-like 17 16728194 16728921 - 116886630 MODEL JAAIVD010000011 pseudo 625997225 Trit1 tRNA isopentenyltransferase 1 ENCODES a protein that exhibits tRNA dimethylallyltransferase activity (ortholog); INVOLVED IN mitochondrial tRNA modification (ortholog); tRNA modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 35 (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 1 35197109 35240019 - 22301074;30032202 116897127 MODEL JAAIVD010000025;XM_032898786;XM_032898795 XP_032754677;XP_032754686 tRNA dimethylallyltransferase protein-coding 625997245 LOC116908334 U6 spliceosomal RNA 8 66438505 66438613 - 116908334 MODEL JAAIVD010000027;XR_004388889 snrna 625997248 LOC116900508 heat shock protein HSP 90-beta-like 5 76769355 76771495 + 116900508 MODEL JAAIVD010000023 pseudo 625997249 LOC116909338 olfactory receptor 6C76-like 1 160244017 160249012 + 116909338 MODEL JAAIVD010000025 pseudo 625997250 Pdxdc1 pyridoxal dependent decarboxylase domain containing 1 ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog) 9 9055037 9135967 + 22301074;30032202 116909275 MODEL JAAIVD010000002;XM_032912810 XP_032768701 pyridoxal-dependent decarboxylase domain-containing protein 1 protein-coding 625997278 Auts2 activator of transcription and developmental regulator AUTS2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axon extension (ortholog); dendrite extension (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); growth cone (ortholog); nucleus (ortholog) 16 22427043 22521658 + 116885176 MODEL JAAIVD010000004;XM_032886390 XP_032742281 autism susceptibility gene 2 protein protein-coding 625997296 F12 coagulation factor XII ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN blood coagulation (ortholog); Factor XII activation (ortholog); plasma kallikrein-kinin cascade (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); angioedema (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN extracellular space (ortholog) 14 73738246 73745928 - 22301074;30032202 116883794 MODEL JAAIVD010000009;XM_032885041;XM_032885042 XP_032740932;XP_032740933 protein-coding 625997318 Dna2 DNA replication helicase/nuclease 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-flap endonuclease activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA double-strand break processing (ortholog); DNA replication (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 6 (ortholog); congenital myopathy (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); gamma DNA polymerase complex (ortholog); mitochondrial nucleoid (ortholog) 18 23714204 23746897 - 22301074;30032202 116887656 MODEL JAAIVD010000013;XM_032889257 XP_032745148 DNA replication ATP-dependent helicase/nuclease DNA2 protein-coding 625997343 Cimap2 ciliary microtubule associated protein 2 1 48189145 48214688 + 116887577 MODEL JAAIVD010000025;XM_032889203 XP_032745094 Lexm lymphocyte expansion molecule protein-coding 625997357 LOC116887677 40S ribosomal protein S25-like 18 5234591 5235096 + 30032202 116887677 MODEL JAAIVD010000013;XM_032889275 XP_032745166 protein-coding 625997362 Zfp57 ZFP57 zinc finger protein ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); double-stranded methylated DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); epigenetic programing of female pronucleus (ortholog); epigenetic programming in the zygotic pronuclei (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH diabetes mellitus (ortholog); genetic disease (ortholog); transient neonatal diabetes mellitus (ortholog); FOUND IN heterochromatin (ortholog); nucleus (ortholog) 18 10000286 10006727 + 22301074 116886944 MODEL JAAIVD010000013;XM_032888442 XP_032744333 zinc finger protein 57 homolog protein-coding 625997371 Mybl2 MYB proto-oncogene like 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitotic spindle assembly (ortholog); positive regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); Myb complex (ortholog); nucleoplasm (ortholog) 5 154904065 154933214 - 30032202 116902386 MODEL JAAIVD010000023;XM_032904902 XP_032760793 myb-related protein B protein-coding 625997389 Gpbp1l1 GC-rich promoter binding protein 1 like 1 1 40197162 40234717 + 22301074;30032202 116898415 MODEL JAAIVD010000025;XM_032899699;XM_032899705 XP_032755590;XP_032755596 vasculin-like protein 1 protein-coding 625997408 Tmem81 transmembrane protein 81 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN sperm-egg recognition (ortholog); FOUND IN plasma membrane (ortholog) 10 3342997 3344982 - 116911035 MODEL JAAIVD010000005;XM_032914776 XP_032770667 protein-coding 625997413 LOC116903807 uncharacterized LOC116903807 6 88884205 88885810 - 116903807 MODEL JAAIVD010000024;XM_032906508 XP_032762399 uncharacterized protein LOC116903807 protein-coding 625997419 Fut8 fucosyltransferase 8 ENCODES a protein that exhibits alpha-(1->6)-fucosyltransferase activity (ortholog); glycoprotein 6-alpha-L-fucosyltransferase activity (ortholog); glycosyltransferase activity (ortholog); INVOLVED IN cell migration (ortholog); fibroblast migration (ortholog); GDP-L-fucose metabolic process (ortholog); ASSOCIATED WITH Congenital Disorder of Glycosylation with Defective Fucosylation 1 (ortholog); genetic disease (ortholog); pulmonary emphysema (ortholog) 7 91462574 91593932 + 22301074;30032202 116905193 MODEL JAAIVD010000026;XM_032907986;XM_032907987 XP_032763877;XP_032763878 alpha-(1,6)-fucosyltransferase protein-coding 625997434 LOC116900582 olfactory receptor 4F3/4F16/4F29-like 5 90466046 90467008 + 22301074 116900582 MODEL JAAIVD010000023;XM_032902304 XP_032758195 protein-coding 625997437 Prss35 serine protease 35 ASSOCIATED WITH Hepatomegaly (ortholog) 8 80810335 80813120 + 22301074 116907998 MODEL JAAIVD010000027;XM_032911254 XP_032767145 inactive serine protease 35 protein-coding 625997442 Rpl14 ribosomal protein L14 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Parkinson's disease (ortholog); renal cell carcinoma (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 8 111785221 111788450 + 22301074;30032202 116907947 MODEL JAAIVD010000027;XM_032911168 XP_032767059 60S ribosomal protein L14 protein-coding 625997452 Sec11a SEC11 homolog A, signal peptidase complex subunit ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN signal peptide processing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 2 119293901 119323188 + 22301074;30032202 116891909 MODEL JAAIVD010000001;XM_032893330 XP_032749221 signal peptidase complex catalytic subunit SEC11A protein-coding 625997462 LOC116898436 vomeronasal type-2 receptor 116-like 4 92944815 92962062 + 116898436 MODEL JAAIVD010000003 pseudo 625997463 Hgd homogentisate 1,2-dioxygenase ENCODES a protein that exhibits homogentisate 1,2-dioxygenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN amino acid metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alkaptonuria (ortholog); Alkaptonuric Ochronosis (ortholog); genetic disease (ortholog) 4 22560089 22610148 + 22301074;30032202 116897874 MODEL JAAIVD010000003;XM_032899282 XP_032755173 protein-coding 625997481 Lactb lactamase beta ENCODES a protein that exhibits identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 8 61313060 61328950 - 116907070 MODEL JAAIVD010000027;XM_032910025;XM_032910026 XP_032765916;XP_032765917 serine beta-lactamase-like protein LACTB, mitochondrial protein-coding 625997493 Elmo3 engulfment and cell motility 3 17 25031582 25036101 + 30032202 116886374 MODEL JAAIVD010000011;XM_032887839 XP_032743730 engulfment and cell motility protein 3 protein-coding 625997517 LOC116908241 40S ribosomal protein SA-like 8 84435988 84437081 + 116908241 MODEL JAAIVD010000027 pseudo 625997518 Lrrc72 leucine rich repeat containing 72 7 49475828 49526758 - 22301074 116906056 MODEL JAAIVD010000026;XM_032909097 XP_032764988 leucine-rich repeat-containing protein 72 protein-coding 625997529 Rbmx2 RNA binding motif protein X-linked 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear membrane (ortholog); nucleolus (ortholog) X 109597162 109605198 - 22301074;30032202 116888147 MODEL JAAIVD010000014;XM_032889477 XP_032745368 RNA-binding motif protein, X-linked 2 protein-coding 625997538 Ankfn1 ankyrin repeat and fibronectin type III domain containing 1 INVOLVED IN behavioral fear response (ortholog); equilibrioception (ortholog); locomotor rhythm (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 81256066 81393171 + 22301074;30032202 116909518 MODEL JAAIVD010000002;XM_032913124 XP_032769015 ankyrin repeat and fibronectin type-III domain-containing protein 1 protein-coding 625997559 Ckmt2 creatine kinase, mitochondrial 2 ENCODES a protein that exhibits cardiolipin binding (ortholog); INVOLVED IN heart development (ortholog); skeletal muscle tissue development (ortholog); FOUND IN mitochondrion (ortholog) 3 204367148 204395867 + 1859839;30032202 116895692 MODEL JAAIVD010000012;X59736;XM_032896892;XM_032896893;XM_032896894 CAA42414;XP_032752783;XP_032752784;XP_032752785 creatine kinase S-type, mitochondrial protein-coding 625997577 Lpar3 lysophosphatidic acid receptor 3 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); phospholipid binding (ortholog); INVOLVED IN bleb assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); gene expression (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; FOUND IN axon (ortholog); cilium (ortholog); plasma membrane (ortholog) 3 14613531 14680586 - 22301074 116895291 MODEL JAAIVD010000012;XM_032896604 XP_032752495 protein-coding 625997584 Ankib1 ankyrin repeat and IBR domain containing 1 6 135972174 136092047 - 22301074;30032202 116904117 MODEL JAAIVD010000024;XM_032907000;XM_032907001;XM_032907002;XM_032907003;XM_032907004;XM_032907005 XP_032762891;XP_032762892;XP_032762893;XP_032762894;XP_032762895;XP_032762896 ankyrin repeat and IBR domain-containing protein 1 protein-coding 625997626 Rrm2 ribonucleotide reductase regulatory subunit M2 ENCODES a protein that exhibits ferric iron binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); blastocyst development (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); breast carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog); nuclear envelope (ortholog); nucleoplasm (ortholog) 7 38316854 38323006 + 22301074;30032202 116904917 MODEL JAAIVD010000026;XM_032907526 XP_032763417 ribonucleoside-diphosphate reductase subunit M2 protein-coding 625997639 Arhgap19 Rho GTPase activating protein 19 FOUND IN plasma membrane (ortholog) 2 40875691 40911811 - 22301074;30032202 116891162 MODEL JAAIVD010000001;XM_032891964 XP_032747855 rho GTPase-activating protein 19 protein-coding 625997656 LOC116913103 uncharacterized LOC116913103 12 31121969 31128262 + 116913103 MODEL JAAIVD010000007;XM_032917244 XP_032773135 uncharacterized protein LOC116913103 protein-coding 625997665 Foxe3 forkhead box E3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell development (ortholog); ciliary body morphogenesis (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 2 (ortholog); Aphakia (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 1 41657483 41659148 + 30032202 116887419 MODEL JAAIVD010000025;XM_032889034 XP_032744925 forkhead box protein E3 protein-coding 625997669 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12105277 12105362 - 116895140 MODEL JAAIVD010000001 trna 625997670 Dlg3 discs large MAGUK scaffold protein 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN establishment of planar polarity (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) X 58653084 58704771 - 22301074;30032202 116889382 MODEL JAAIVD010000014;XM_032890485 XP_032746376 disks large homolog 3 protein-coding 625997695 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 71585970 71586051 - 116914210 MODEL JAAIVD010000007 trna 625997696 Wdr75 WD repeat domain 75 INVOLVED IN positive regulation of rRNA processing (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); small-subunit processome (ortholog) 4 121653785 121682831 + 22301074;30032202 116899355 MODEL JAAIVD010000003;XM_032901062 XP_032756953 WD repeat-containing protein 75 protein-coding 625997721 Napg NSF attachment protein gamma FOUND IN mitochondrion (ortholog); synapse (ortholog) 15 68877151 68895918 + 22301074;30032202 116884326 MODEL JAAIVD010000010;XM_032885460 XP_032741351 gamma-soluble NSF attachment protein protein-coding 625997737 Eps8l1 EPS8 signaling adaptor L1 ENCODES a protein that exhibits actin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); T cell receptor binding (ortholog); INVOLVED IN positive regulation of ruffle assembly (ortholog); regulation of Rho protein signal transduction (ortholog); Rho protein signal transduction (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); ruffle membrane (ortholog) 2 177068835 177081260 + 30032202 116892652 MODEL JAAIVD010000001;XM_032894473 XP_032750364 EPS8 like 1;epidermal growth factor receptor kinase substrate 8-like protein 1 protein-coding 625997760 Letmd1 LETM1 domain containing 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); gene expression (ortholog); inflammatory response (ortholog); ASSOCIATED WITH breast cancer (ortholog); ovarian carcinoma (ortholog); renal carcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 1 262609799 262623539 - 22301074;30032202 116884008 MODEL JAAIVD010000025;XM_032885250;XM_032885256;XM_032885260;XM_032885265 XP_032741141;XP_032741147;XP_032741151;XP_032741156 LETM1 domain-containing protein 1 protein-coding 625997784 LOC116894213 olfactory receptor 508-like 2 106548995 106549928 + 22301074;30032202 116894213 MODEL JAAIVD010000001;XM_032895926 XP_032751817 protein-coding 625997788 Ganc glucosidase alpha, neutral C ENCODES a protein that exhibits alpha-1,4-glucosidase activity (ortholog) 5 98537530 98587645 + 22301074;30032202 116901834 MODEL JAAIVD010000023;XM_032904005 XP_032759896 neutral alpha-glucosidase C protein-coding 625997816 LOC116904982 serine palmitoyltransferase small subunit A-like 7 44611541 44611734 + 116904982 MODEL JAAIVD010000026 pseudo 625997817 Pop5 POP5 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA processing (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) 16 38588268 38591992 - 22301074 116885125 MODEL JAAIVD010000004;XM_032886280 XP_032742171 POP5 homolog, ribonuclease P/MRP subunit;ribonuclease P/MRP protein subunit POP5 protein-coding 625997826 LOC116889828 zinc finger protein 431-like 30032202 116889828 MODEL JAAIVD010001412;XM_032890663 XP_032746554 protein-coding 625997827 Cd8a CD8 subunit alpha ENCODES a protein that exhibits identical protein binding (ortholog); MHC class I protein complex binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cytotoxic T cell differentiation (ortholog); defense response to virus (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); amphetamine abuse (ortholog); anogenital venereal wart (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 74383243 74388142 + 116903683 MODEL JAAIVD010000024;XM_032906345 XP_032762236 CD8a molecule;T-cell surface glycoprotein CD8 alpha chain protein-coding 625997837 LOC116913093 protein mono-ADP-ribosyltransferase PARP4-like 12 68169798 68181761 - 116913093 MODEL JAAIVD010000007;XR_004389593 pseudo 625997843 LOC116903035 putative vomeronasal receptor-like protein 4 6 159336281 159337182 - 116903035 MODEL JAAIVD010000024 pseudo 625997844 Mroh2a maestro heat like repeat family member 2A 4 160258175 160294957 + 30032202 116899623 MODEL JAAIVD010000003;XM_032901585 XP_032757476 maestro heat-like repeat-containing protein family member 2A protein-coding 625997891 LOC116901023 60S ribosomal protein L13-like 5 129381484 129392875 + 116901023 MODEL JAAIVD010000023 pseudo 625997892 Cd101 CD101 molecule INVOLVED IN positive regulation of myeloid leukocyte differentiation (ortholog) 3 57035448 57073615 + 116896463 MODEL JAAIVD010000012;XM_032897625 XP_032753516 immunoglobulin superfamily member 2 protein-coding 625997905 LOC116909372 olfactory receptor 1361-like 9 38705256 38713489 + 22301074;30032202 116909372 MODEL JAAIVD010000002;XM_032912922;XM_032912923 XP_032768813;XP_032768814 protein-coding 625997911 LOC116892971 zinc finger protein 501-like 1 13310213 13330423 - 30032202 116892971 MODEL JAAIVD010000025;XM_032894932 XP_032750823 protein-coding 625997918 LOC116909798 ADP/ATP translocase 2-like 9 27174238 27175469 + 22301074;30032202 116909798 MODEL JAAIVD010000002;XM_032913492 XP_032769383 protein-coding 625997923 Vwa8 von Willebrand factor A domain containing 8 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog); orofacial cleft (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) 12 45149350 45469736 - 22301074;30032202 116913790 MODEL JAAIVD010000007;XM_032918098 XP_032773989 von Willebrand factor A domain-containing protein 8 protein-coding 625997972 Ubxn1 UBX domain protein 1 ENCODES a protein that exhibits ATPase binding (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); K6-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN negative regulation of ERAD pathway (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of protein K48-linked deubiquitination (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 2 9068692 9072678 - 22301074 116890920 MODEL JAAIVD010000001;XM_032891553 XP_032747444 UBX domain-containing protein 1 protein-coding 625997986 LOC116894227 lisH domain-containing protein FOPNL-like 2 108100141 108100767 - 116894227 MODEL JAAIVD010000001 pseudo 625997987 Cemip cell migration inducing hyaluronidase 1 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); ER retention sequence binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); hyaluronan metabolic process (ortholog); positive regulation of cell migration (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); cytoplasm (ortholog) 2 116255294 116409056 + 116891880 MODEL JAAIVD010000001;XM_032893289;XM_032893290 XP_032749180;XP_032749181 cell migration-inducing and hyaluronan-binding protein protein-coding 625998024 LOC116907489 neutrophilic granule protein-like 8 101001907 101005092 + 22301074;30032202 116907489 MODEL JAAIVD010000027;XM_032910482 XP_032766373 protein-coding 625998032 Rfc5 replication factor C subunit 5 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog) 16 36441232 36450589 + 22301074;30032202 116885225 MODEL JAAIVD010000004;XM_032886462 XP_032742353 protein-coding 625998046 Lpar4 lysophosphatidic acid receptor 4 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); lysophosphatidic acid receptor activity (ortholog); FOUND IN nuclear body (ortholog); plasma membrane (ortholog) X 64644200 64652267 - 22301074;30032202 116889245 MODEL JAAIVD010000014;XM_032890399 XP_032746290 protein-coding 625998052 Dmrt3 doublesex and mab-3 related transcription factor 3 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN adult walking behavior (ortholog); male sex differentiation (ortholog); regulation of odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN nucleus (ortholog) 2 25712501 25725417 + 22301074;30032202 116893749 MODEL JAAIVD010000001;XM_032895457 XP_032751348 doublesex- and mab-3-related transcription factor 3 protein-coding 625998056 LOC116901026 induced myeloid leukemia cell differentiation protein Mcl-1 homolog 5 129603871 129626070 + 116901026 MODEL JAAIVD010000023 pseudo 625998057 Kcne2 potassium voltage-gated channel subfamily E regulatory subunit 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); coronary artery disease (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); membrane (ortholog) 4 52323142 52330597 - 22301074;30032202 116898982 MODEL JAAIVD010000003;XM_032900409 XP_032756300 potassium voltage-gated channel subfamily E member 2 protein-coding 625998063 Trpm2 transient receptor potential cation channel subfamily M member 2 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); calcium ion binding (ortholog); hydrolase activity (ortholog); INVOLVED IN calcium ion import across plasma membrane (ortholog); calcium ion transmembrane import into cytosol (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Brain Injuries (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 18 1210664 1259458 - 22301074;30032202 116887257 MODEL JAAIVD010000013;XM_032888823 XP_032744714 protein-coding 625998100 LOC116893606 40S ribosomal protein S28-like 2 4763328 4763633 + 22301074;30032202 116893606 MODEL JAAIVD010000001;XM_032895314 XP_032751205 protein-coding 625998105 Cds2 CDP-diacylglycerol synthase 2 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 5 111979020 112019276 + 22301074;30032202 116902002 MODEL JAAIVD010000023;XM_032904266 XP_032760157 phosphatidate cytidylyltransferase 2 protein-coding 625998122 LOC116899737 U4 spliceosomal RNA 4 139432787 139432963 - 116899737 MODEL JAAIVD010000003 pseudo 625998123 LOC116913926 non-POU domain-containing octamer-binding protein-like 12 33424319 33425834 - 116913926 MODEL JAAIVD010000007 pseudo 625998124 Upp1 uridine phosphorylase 1 ENCODES a protein that exhibits deoxyuridine phosphorylase activity (ortholog); identical protein binding (ortholog); thymidine phosphorylase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); long QT syndrome (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 11 78169622 78188486 + 22301074;30032202 116912614 MODEL JAAIVD010000006;XM_032916741 XP_032772632 protein-coding 625998137 LOC116909778 40S ribosomal protein S15a-like 9 86615078 86615480 - 116909778 MODEL JAAIVD010000002 pseudo 625998138 LOC116884917 tubulin alpha-1A chain-like 1 271779162 271782955 - 116884917 MODEL JAAIVD010000025;XR_004385906 pseudo 625998144 Camta2 calmodulin binding transcription activator 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cardiac muscle hypertrophy in response to stress (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH nonprogressive cerebellar ataxia with mental retardation (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 9 50280856 50298951 - 22301074;30032202 116909531 MODEL JAAIVD010000002;XM_032913137;XM_032913139;XM_032913140;XM_032913141;XM_032913142;XM_032913143;XM_032913144;XM_032913145 XP_032769028;XP_032769030;XP_032769031;XP_032769032;XP_032769033;XP_032769034;XP_032769035;XP_032769036 calmodulin-binding transcription activator 2 protein-coding 625998183 Limk2 LIM domain kinase 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN astral microtubule organization (ortholog); cornea development in camera-type eye (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) 11 72338612 72405941 - 22301074;30032202 116912137 MODEL JAAIVD010000006;XM_032916051;XM_032916052;XM_032916053 XP_032771942;XP_032771943;XP_032771944 protein-coding 625998209 LOC116906428 U11 spliceosomal RNA 7 70709330 70709489 - 116906428 MODEL JAAIVD010000026;XR_004388689 snrna 625998212 LOC116904724 small nucleolar RNA SNORA17 6 86093836 86093962 - 116904724 MODEL JAAIVD010000024;XR_004388416 snorna 625998215 Hoxd13 homeobox D13 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branch elongation of an epithelium (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH anemia (ortholog); Anorectal Malformations (ortholog); brachydactyly (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 52009533 52012820 + 22301074;30032202 116900207 MODEL JAAIVD010000023;XM_032901961 XP_032757852 homeobox protein Hox-D13 protein-coding 625998220 LOC116914121 small nucleolar RNA SNORA17 12 81435547 81435678 + 116914121 MODEL JAAIVD010000007;XR_004389685 snorna 625998223 Inpp5b inositol polyphosphate-5-phosphatase B ENCODES a protein that exhibits inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); in utero embryonic development (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH Dent disease 2 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 1 33494056 33556709 - 22301074;30032202 116896873 MODEL JAAIVD010000025;XM_032898420 XP_032754311 type II inositol 1,4,5-trisphosphate 5-phosphatase protein-coding 625998250 Meioc meiosis specific with coiled-coil domain INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); double-strand break repair (ortholog); female meiosis I (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 61965910 61982653 + 22301074;30032202 116910431 MODEL JAAIVD010000002;XM_032914275 XP_032770166 meiosis-specific coiled-coil domain-containing protein MEIOC protein-coding 625998260 LOC116897533 small nucleolar RNA SNORA48 3 73152797 73152943 + 116897533 MODEL JAAIVD010000012;XR_004387548 snorna 625998263 Ccne2 cyclin E2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN chromosome organization involved in meiotic cell cycle (ortholog); DNA replication initiation (ortholog); homologous chromosome pairing at meiosis (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); endometriosis (ortholog); head and neck squamous cell carcinoma (ortholog); FOUND IN cyclin E2-CDK2 complex (ortholog) 1 132506095 132517836 - 30032202 116903422 MODEL JAAIVD010000025;XM_032905954;XM_032905964;XM_032905974 XP_032761845;XP_032761855;XP_032761865 G1/S-specific cyclin-E2 protein-coding 625998288 LOC116887529 double homeobox protein 4C-like 18 34536635 34537954 + 22301074 116887529 MODEL JAAIVD010000013;XM_032889159 XP_032745050 protein-coding 625998292 Rcc1l RCC1 like ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial fusion (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); mitochondrial small ribosomal subunit assembly (ortholog); ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 16 19874962 19906580 + 116885575 MODEL JAAIVD010000004;XM_032886871;XM_032886872 XP_032742762;XP_032742763 RCC1-like G exchanging factor-like protein protein-coding 625998310 LOC116906086 L-lactate dehydrogenase A chain-like 7 69462894 69467713 - 116906086 MODEL JAAIVD010000026 pseudo 625998311 Dhrs7c dehydrogenase/reductase 7C ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN D-glucose import (ortholog); intracellular calcium ion homeostasis (ortholog); regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum (ortholog); FOUND IN longitudinal sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) 9 47410110 47428913 + 30032202 116909281 MODEL JAAIVD010000002;XM_032912816;XM_032912817 XP_032768707;XP_032768708 dehydrogenase/reductase SDR family member 7C protein-coding 625998327 LOC116887310 60S ribosomal protein L29-like 18 23594793 23595294 + 116887310 MODEL JAAIVD010000013 pseudo 625998328 LOC116894530 serine/threonine-protein kinase SBK1-like 2 175794647 175796187 - 116894530 MODEL JAAIVD010000001 pseudo 625998329 Gpr33 G protein-coupled receptor 33 ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog) 7 65459393 65464114 - 22301074;30032202 116904935 Q49SP8 MODEL AH013653;AY490645;JAAIVD010000026;XM_032907567 AAR98757;Q49SP8;XP_032763458 Probable G-protein coupled receptor 33 protein-coding 625998334 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 70479923 70479995 - 116914209 MODEL JAAIVD010000007 trna 625998335 Tex10 testis expressed 10 FOUND IN mitochondrion (ortholog); MLL1 complex (ortholog); nucleoplasm (ortholog) 1 101514888 101553773 - 30032202 116902038 MODEL JAAIVD010000025;XM_032904325;XM_032904333;XM_032904339 XP_032760216;XP_032760224;XP_032760230 testis-expressed protein 10 protein-coding 625998361 LOC116905055 protein FAM177A1 7 68439840 68502401 + 22301074;30032202 116905055 MODEL JAAIVD010000026;XM_032907747;XM_032907748 XP_032763638;XP_032763639 signal recognition particle 54 kDa protein protein-coding 625998387 Ints10 integrator complex subunit 10 INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) 13 20616218 20646805 - 22301074;30032202 116914234 MODEL JAAIVD010000008;XM_032918428;XM_032918430;XM_032918431;XM_032918432;XM_032918433 XP_032774319;XP_032774321;XP_032774322;XP_032774323;XP_032774324 protein-coding 625998417 LOC116884089 small nucleolar RNA SNORA17 14 50372060 50372159 + 116884089 MODEL JAAIVD010000009 pseudo 625998418 LOC116907778 uncharacterized LOC116907778 8 94303873 94306453 - 116907778 MODEL JAAIVD010000027;XR_004388843 ncrna 625998423 Tti2 TELO2 interacting protein 2 ASSOCIATED WITH autosomal recessive intellectual developmental disorder 39 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN TTT Hsp90 cochaperone complex (ortholog) 13 55755199 55763157 - 30032202 116914509 MODEL JAAIVD010000008;XM_032918832 XP_032774723 TELO2-interacting protein 2 protein-coding 625998434 LOC116906033 60S ribosomal protein L7a-like 1 152666041 152666685 - 116906033 MODEL JAAIVD010000025 pseudo 625998435 LOC116897421 U6 spliceosomal RNA 3 212411204 212411307 - 116897421 MODEL JAAIVD010000012;XR_004387463 snrna 625998438 Gorasp1 golgi reassembly stacking protein 1 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); Golgi ribbon formation (ortholog); FOUND IN Golgi apparatus (ortholog) 8 111165458 111176982 - 22301074;30032202 116907925 MODEL JAAIVD010000027;XM_032911137 XP_032767028 Golgi reassembly-stacking protein 1 protein-coding 625998450 LOC116903580 sepiapterin reductase-like 6 61046194 61049667 - 22301074;30032202 116903580 MODEL JAAIVD010000024;XM_032906203 XP_032762094 protein-coding 625998457 Agpat2 1-acylglycerol-3-phosphate O-acyltransferase 2 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN epidermis development (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); ASSOCIATED WITH congenital generalized lipodystrophy (ortholog); congenital generalized lipodystrophy type 1 (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 10484387 10495586 + 22301074;30032202 116901265 MODEL JAAIVD010000023;XM_032903022 XP_032758913 1-acyl-sn-glycerol-3-phosphate acyltransferase beta protein-coding 625998467 LOC116913849 60S ribosomal protein L23a-like 12 64589251 64589914 + 116913849 MODEL JAAIVD010000007 pseudo 625998468 LOC116895451 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 3 76993044 76993657 - 116895451 MODEL JAAIVD010000012 pseudo 625998469 Hrh3 histamine receptor H3 ENCODES a protein that exhibits amine binding (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cAMP metabolic process (ortholog); cognition (ortholog); drinking behavior (ortholog); ASSOCIATED WITH amnestic disorder (ortholog); Experimental Seizures (ortholog); gastric ulcer (ortholog) 5 157180967 157186018 - 22301074;30032202 116902402 MODEL JAAIVD010000023;XM_032904929;XM_032904930;XM_032904931 XP_032760820;XP_032760821;XP_032760822 histamine H3 receptor protein-coding 625998481 Arhgap28 Rho GTPase activating protein 28 INVOLVED IN negative regulation of stress fiber assembly (ortholog); ASSOCIATED WITH allergic disease (ortholog); endometriosis (ortholog); meningioma (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog) 4 177494097 177658673 - 22301074;30032202 116898291 MODEL JAAIVD010000003;XM_032899643;XM_032899644 XP_032755534;XP_032755535 rho GTPase-activating protein 28 protein-coding 625998507 LOC116914650 uncharacterized LOC116914650 1 255029586 255046532 + 116914650 MODEL JAAIVD010000025;XR_004389759;XR_004389760 ncrna 625998516 Rhbdf1 rhomboid 5 homolog 1 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); negative regulation of protein secretion (ortholog); ASSOCIATED WITH Wolff-Parkinson-White syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 9 3661662 3674489 + 22301074;30032202 116909490 MODEL JAAIVD010000002;XM_032913087;XM_032913088 XP_032768978;XP_032768979 inactive rhomboid protein 1 protein-coding 625998542 LOC116914769 ubiquitin-conjugating enzyme E2 E3-like 13 50645581 50646286 - 116914769 MODEL JAAIVD010000008 pseudo 625998543 Ly96 lymphocyte antigen 96 ENCODES a protein that exhibits lipopolysaccharide immune receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); detection of lipopolysaccharide (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Bacterial Keratitis (ortholog); carcinoma (ortholog); cholestasis (ortholog); FOUND IN lipopolysaccharide receptor complex (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 1 136232122 136260560 + 30032202 116903578 MODEL JAAIVD010000025;XM_032906204;XM_032906210;XM_032906218;XM_032906228 XP_032762095;XP_032762101;XP_032762109;XP_032762119 protein-coding 625998567 Trpc3 transient receptor potential cation channel subfamily C member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); calcium-activated cation channel activity (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); positive regulation of calcium ion transport into cytosol (ortholog); positive regulation of cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH Albuminuria (ortholog); bipolar disorder (ortholog); cerebellar ataxia type 41 (ortholog); FOUND IN plasma membrane (ortholog) 3 117306258 117367269 + 22301074;30032202 116896925 MODEL JAAIVD010000012;XM_032898489;XM_032898490;XM_032898491;XM_032898493;XM_032898494 XP_032754380;XP_032754381;XP_032754382;XP_032754384;XP_032754385 short transient receptor potential channel 3 protein-coding 625998591 Pde9a phosphodiesterase 9A ENCODES a protein that exhibits 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cGMP catabolic process (ortholog); cGMP metabolic process (ortholog); negative regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Death (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); perikaryon (ortholog) 18 2400586 2493988 - 30032202 116886994 MODEL JAAIVD010000013;XM_032888473;XM_032888474;XM_032888475;XM_032888476;XM_032888477 XP_032744364;XP_032744365;XP_032744366;XP_032744367;XP_032744368 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A protein-coding 625998622 LOC116890260 olfactory receptor 8D4-like 1 147078961 147079892 + 116890260 MODEL JAAIVD010000025 pseudo 625998623 LOC116887801 cytochrome c oxidase subunit NDUFA4-like X 111610292 111610537 - 116887801 MODEL JAAIVD010000014 pseudo 625998624 LOC116894184 glyceraldehyde-3-phosphate dehydrogenase-like 2 105984007 105985006 - 116894184 MODEL JAAIVD010000001 pseudo 625998625 Zcrb1 zinc finger CCHC-type and RNA binding motif containing 1 FOUND IN U12-type spliceosomal complex (ortholog) 1 266299854 266311652 - 22301074;30032202 116884275 MODEL JAAIVD010000025;XM_032885362 XP_032741253 zinc finger CCHC-type and RNA-binding motif-containing protein 1 protein-coding 625998636 Rbbp8 RB binding protein 8, endonuclease ENCODES a protein that exhibits damaged DNA binding (ortholog); identical protein binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA strand resection involved in replication fork processing (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN BRCA1-C complex (ortholog); nucleoplasm (ortholog); site of double-strand break (ortholog) 15 31856153 31926503 - 30032202 116884341 MODEL JAAIVD010000010;XM_032885473 XP_032741364 DNA endonuclease RBBP8 protein-coding 625998659 Vwa5a von Willebrand factor A domain containing 5A FOUND IN nucleoplasm (ortholog) 8 32449222 32469386 + 116907262 MODEL JAAIVD010000027;XM_032910218 XP_032766109 von Willebrand factor A domain-containing protein 5A protein-coding 625998681 Tagln2 transgelin 2 INVOLVED IN epithelial cell differentiation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) 10 51618746 51625730 + 22301074 116911050 MODEL JAAIVD010000005;XM_032914801;XM_032914802;XM_032914803 XP_032770692;XP_032770693;XP_032770694 transgelin-2 protein-coding 625998696 LOC116895743 glycophorin-C-like 3 34433485 34434074 - 116895743 MODEL JAAIVD010000012 pseudo 625998697 Hspa9 heat shock protein family A (Hsp70) member 9 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); enzyme binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to interleukin-1 (ortholog); erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; presequence pathway of mitochondrial protein import; ASSOCIATED WITH Alzheimer's disease (ortholog); autoimmune disease (ortholog); autosomal dominant sideroblastic anemia 4 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 15 9408025 9426991 + 22301074;30032202 116884337 MODEL JAAIVD010000010;XM_032885471 XP_032741362 stress-70 protein, mitochondrial protein-coding 625998718 Txndc15 thioredoxin domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); Meckel syndrome (ortholog); Meckel Syndrome 14 (ortholog); FOUND IN cilium (ortholog) 14 74032055 74044622 + 30032202 116883670 MODEL JAAIVD010000009;XM_032884867 XP_032740758 thioredoxin domain-containing protein 15 protein-coding 625998727 Etfdh electron transfer flavoprotein dehydrogenase ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); electron transfer activity (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); INVOLVED IN electron transport chain (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH disease of metabolism (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial inner membrane (ortholog) 3 73778467 73801006 + 22301074;30032202 116896761 MODEL JAAIVD010000012;XM_032898208;XM_032898209 XP_032754099;XP_032754100 electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial protein-coding 625998749 Pttg1ip PTTG1 interacting protein ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 924031 935534 + 30032202 116887065 MODEL JAAIVD010000013;XM_032888565 XP_032744456 pituitary tumor-transforming gene 1 protein-interacting protein protein-coding 625998757 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 68688068 68688140 - 116910786 MODEL JAAIVD010000002 trna 625998758 Stmnd1 stathmin domain containing 1 14 65253617 65285128 + 22301074;30032202 116883843 MODEL JAAIVD010000009;XM_032885107 XP_032740998 stathmin domain-containing protein 1 protein-coding 625998766 LOC116910171 60S ribosomal protein L23a-like 9 79346698 79347236 - 116910171 MODEL JAAIVD010000002 pseudo 625998767 Nags N-acetylglutamate synthase ENCODES a protein that exhibits L-glutamate N-acetyltransferase activity (ortholog); INVOLVED IN glutamate metabolic process (ortholog); ASSOCIATED WITH amino acid metabolic disorder (ortholog); esophageal atresia (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 9 61437231 61441347 + 22301074;30032202 116910167 MODEL JAAIVD010000002;XM_032914026 XP_032769917 N-acetylglutamate synthase, mitochondrial protein-coding 625998778 LOC116888218 nucleoside diphosphate kinase B-like X 128941573 128942278 + 116888218 MODEL JAAIVD010000014 pseudo 625998779 LOC116903209 alpha-1-macroglobulin 6 19169730 19217977 + 22301074 116903209 MODEL JAAIVD010000024;XM_032905583 XP_032761474 protein-coding 625998819 Lurap1l leucine rich adaptor protein 1 like ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); Experimental Liver Cirrhosis (ortholog) 1 72637759 72678363 - 30032202 116900742 MODEL JAAIVD010000025;XM_032902450 XP_032758341 leucine rich adaptor protein 1-like protein-coding 625998825 LOC116897939 olfactory receptor 187-like 4 42948041 42948976 - 22301074;30032202 116897939 MODEL JAAIVD010000003;XM_032899339 XP_032755230 protein-coding 625998829 Perm1 PPARGC1 and ESRR induced regulator, muscle 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); response to muscle activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 4448264 4452771 - 30032202 116891453 MODEL JAAIVD010000025;XM_032892527 XP_032748418 PGC-1 and ERR-induced regulator in muscle protein 1 protein-coding 625998836 LOC116902281 uncharacterized LOC116902281 1 109093583 109100346 + 116902281 MODEL JAAIVD010000025;XR_004388061 ncrna 625998841 LOC116895071 small nucleolar RNA SNORA17 2 23734012 23734113 + 116895071 MODEL JAAIVD010000001 pseudo 625998842 LOC116894564 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178586107 178592909 + 30032202 116894564 MODEL JAAIVD010000001;XM_032896274 XP_032752165 protein-coding 625998857 Syt8 synaptotagmin 8 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); clathrin binding (ortholog); INVOLVED IN acrosome reaction (ortholog); FOUND IN cytoplasm (ortholog); vesicle (ortholog) 2 7036048 7038969 - 30032202 116890980 MODEL JAAIVD010000001;XM_032891648 XP_032747539 synaptotagmin-8 protein-coding 625998869 LOC116888801 voltage-dependent anion-selective channel protein 1-like X 121295093 121295966 + 116888801 MODEL JAAIVD010000014 pseudo 625998870 Tafa5 TAFA chemokine like family member 5 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of vascular associated smooth muscle cell migration (ortholog); negative regulation of vascular associated smooth muscle cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 1 256858899 257078386 + 30032202 116914785 MODEL JAAIVD010000025;XM_032919235;XM_032919243 XP_032775126;XP_032775134 chemokine-like protein TAFA-5 protein-coding 625998881 LOC116897431 U6 spliceosomal RNA 3 92329951 92330054 + 116897431 MODEL JAAIVD010000012;XR_004387472 snrna 625998884 Rnaseh2b ribonuclease H2 subunit B INVOLVED IN in utero embryonic development (ortholog); negative regulation of gene expression (ortholog); positive regulation of fibroblast proliferation (ortholog); ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); Aicardi-Goutieres Syndrome 2 (ortholog); FOUND IN nucleoplasm (ortholog); ribonuclease H2 complex (ortholog) 12 62040379 62081699 - 22301074;30032202 116913667 MODEL JAAIVD010000007;XM_032917955 XP_032773846 protein-coding 625998899 LOC116912980 small nucleolar RNA SNORA17 11 92013965 92014097 - 116912980 MODEL JAAIVD010000006;XR_004389545 snorna 625998902 Spag9 sperm associated antigen 9 ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN JNK cascade (ortholog); lysosome localization (ortholog); negative regulation of dendrite extension (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH endometrial cancer (ortholog); hepatocellular carcinoma (ortholog); liver cirrhosis (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 51407244 51534962 - 30032202 116909387 MODEL JAAIVD010000002;XM_032912941;XM_032912942;XM_032912943;XM_032912944;XM_032912945;XM_032912947;XM_032912948 XP_032768832;XP_032768833;XP_032768834;XP_032768835;XP_032768836;XP_032768838;XP_032768839 C-Jun-amino-terminal kinase-interacting protein 4 protein-coding 625998952 LOC116914940 uncharacterized LOC116914940 13 10277456 10296187 - 116914940 MODEL JAAIVD010000008 pseudo 625998953 LOC116900134 olfactory receptor 50-like 5 14560001 14560948 + 22301074;30032202 116900134 MODEL JAAIVD010000023;XM_032901908 XP_032757799 protein-coding 625998956 Ddr2 discoidin domain receptor tyrosine kinase 2 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); transmembrane receptor protein tyrosine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenosquamous gallbladder carcinoma (ortholog); alcoholic liver cirrhosis (ortholog); colorectal cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); plasma membrane (ortholog) 10 49182923 49285520 - 22301074;30032202 116911343 MODEL JAAIVD010000005;XM_032915259 XP_032771150 discoidin domain-containing receptor 2 protein-coding 625998977 Rpl26l1 ribosomal protein L26 like 1 ASSOCIATED WITH COVID-19 (ortholog) 9 4784763 4789870 - 116910076 MODEL JAAIVD010000002;XM_032913891;XR_004389132;XR_004389133;XR_004389134 XP_032769782 60S ribosomal protein L26-like 1 protein-coding 625998989 LOC116899736 U4 spliceosomal RNA 4 51025005 51025159 - 116899736 MODEL JAAIVD010000003 pseudo 625998990 LOC116898163 proteolipid protein 2-like 4 121816488 121817116 + 22301074 116898163 MODEL JAAIVD010000003;XM_032899538 XP_032755429 protein-coding 625998995 LOC116899918 U1 spliceosomal RNA 4 80639013 80639173 - 116899918 MODEL JAAIVD010000003;XR_004387890 snrna 625998998 LOC116910320 nucleoporin GLE1-like 9 54616005 54617754 - 116910320 MODEL JAAIVD010000002 pseudo 625998999 LOC116911328 NADH-cytochrome b5 reductase 1 FOUND IN cytosol (ortholog); mitochondrion (ortholog) 10 1293276 1299361 - 22301074;30032202 116911328 MODEL JAAIVD010000005;XM_032915246 XP_032771137 protein-coding 625999012 LOC116903838 60S acidic ribosomal protein P2-like 1 142029462 142034094 - 22301074;30032202 116903838 MODEL JAAIVD010000025;XM_032906599 XP_032762490 protein-coding 625999016 LOC116905691 G patch domain-containing protein 4-like 7 58346628 58347902 + 116905691 MODEL JAAIVD010000026 pseudo 625999017 Snx31 sorting nexin 31 FOUND IN protein-containing complex (ortholog) 1 210024659 210078711 - 22301074;30032202 116890054 MODEL JAAIVD010000025;XM_032890823;XM_032890824 XP_032746714;XP_032746715 sorting nexin-31 protein-coding 625999036 LOC116890387 U6 spliceosomal RNA 1 46324309 46324411 + 116890387 MODEL JAAIVD010000025;XR_004386593 snrna 625999039 LOC116911728 PHD finger-like domain-containing protein 5A 10 39674972 39675450 + 116911728 MODEL JAAIVD010000005 pseudo 625999040 Phrf1 PHD and ring finger domains 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN mRNA processing (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); systemic lupus erythematosus (ortholog) 2 8216546 8249537 - 116890879 MODEL JAAIVD010000001;XM_032891467;XM_032891468;XM_032891469;XM_032891470;XM_032891471;XM_032891472;XM_032891473;XR_004386791;XR_004386792 XP_032747358;XP_032747359;XP_032747360;XP_032747361;XP_032747362;XP_032747363;XP_032747364 PHD and RING finger domain-containing protein 1 protein-coding 625999078 LOC116913771 eosinophil cationic protein-like 12 72070559 72071366 + 22301074;30032202 116913771 MODEL JAAIVD010000007;XM_032918077 XP_032773968 protein-coding 625999084 LOC116897865 cystatin-A-like 4 21115746 21126936 - 22301074;30032202 116897865 MODEL JAAIVD010000003;XM_032899272 XP_032755163 protein-coding 625999091 Acss3 acyl-CoA synthetase short chain family member 3 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; fatty acid beta degradation pathway; malonic aciduria pathway; FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 185198421 185384040 - 116908754 MODEL JAAIVD010000025;XM_032912106;XM_032912114 XP_032767997;XP_032768005 acyl-CoA synthetase short-chain family member 3, mitochondrial protein-coding 625999116 Diras2 DIRAS family GTPase 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of MAP kinase activity (ortholog); FOUND IN plasma membrane (ortholog) 14 70826004 70854890 - 22301074;30032202 116883528 MODEL JAAIVD010000009;XM_032884700 XP_032740591 GTP-binding protein Di-Ras2 protein-coding 625999122 LOC116909444 cytochrome b561 ENCODES a protein that exhibits transmembrane monodehydroascorbate reductase activity (ortholog); INVOLVED IN ascorbate homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Orthostatic Hypotension 2 (ortholog); FOUND IN chromaffin granule membrane (ortholog) 9 73164264 73174883 + 30032202 116909444 MODEL JAAIVD010000002;XM_032913023 XP_032768914 protein-coding 625999133 Maco1 macoilin 1 INVOLVED IN brain development (ortholog); neuronal signal transduction (ortholog); ASSOCIATED WITH Coronary Disease (ortholog); Dyslipidemias (ortholog); FOUND IN axon (ortholog); neuron projection (ortholog); neuron projection terminus (ortholog) 1 23392813 23454682 + 22301074;30032202 116894650 MODEL JAAIVD010000025;XM_032896360 XP_032752251 macoilin protein-coding 625999148 LOC116895669 60S ribosomal protein L7a-like 3 196387987 196388783 + 116895669 MODEL JAAIVD010000012 pseudo 625999149 Clcn7 chloride voltage-gated channel 7 INVOLVED IN response to pH (ortholog); transepithelial chloride transport (ortholog); ASSOCIATED WITH autosomal dominant osteopetrosis 2 (ortholog); autosomal recessive osteopetrosis 4 (ortholog); connective tissue disease (ortholog); FOUND IN chloride channel complex (ortholog); lysosomal membrane (ortholog) 9 2400659 2426267 + 22301074;30032202 116908944 MODEL JAAIVD010000002;XM_032912401 XP_032768292 H(+)/Cl(-) exchange transporter 7 protein-coding 625999178 Cysltr1 cysteinyl leukotriene receptor 1 ENCODES a protein that exhibits leukotriene receptor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); allergic asthma (ortholog); allergic disease (ortholog); FOUND IN plasma membrane (ortholog) X 72447173 72448254 - 22301074;30032202 116889290 MODEL JAAIVD010000014;XM_032890421 XP_032746312 protein-coding 625999183 LOC116888969 uncharacterized LOC116888969 X 8178180 8179513 - 116888969 MODEL JAAIVD010000014 pseudo 625999184 Znrf1 zinc and ring finger 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of autophagosome-lysosome fusion (ortholog); positive regulation of toll-like receptor 4 signaling pathway (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) 17 31222687 31308863 + 116886492 MODEL JAAIVD010000011;XM_032887993;XM_032887994;XM_032887996;XM_032887997 XP_032743884;XP_032743885;XP_032743887;XP_032743888 E3 ubiquitin-protein ligase ZNRF1 protein-coding 625999199 Efl1 elongation factor like GTPase 1 ENCODES a protein that exhibits GTPase activity (ortholog); ribosome binding (ortholog); INVOLVED IN cytosolic ribosome assembly (ortholog); GTP metabolic process (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); genetic disease (ortholog); high grade glioma (ortholog) 2 117490187 117612664 - 22301074;30032202 116891889 MODEL JAAIVD010000001;XM_032893298 XP_032749189 elongation factor-like GTPase 1 protein-coding 625999223 LOC116889201 protein CXorf21-like X 62667192 62670829 + 22301074;30032202 116889201 MODEL JAAIVD010000014;XM_032890358 XP_032746249 protein-coding 625999229 LOC116904706 U1 spliceosomal RNA 6 67475727 67475887 - 116904706 MODEL JAAIVD010000024;XR_004388401 snrna 625999232 LOC116907263 rho GTPase-activating protein 20-like 8 14436843 14453094 + 22301074;30032202 116907263 MODEL JAAIVD010000027;XM_032910219 XP_032766110 protein-coding 625999244 LOC116897595 U1 spliceosomal RNA 3 127537902 127538042 - 116897595 MODEL JAAIVD010000012 pseudo 625999245 Ddit4l DNA damage inducible transcript 4 like ASSOCIATED WITH melanoma (ortholog) 3 21528359 21531514 - 22301074;30032202 116895304 MODEL JAAIVD010000012;XM_032896616 XP_032752507 DNA damage-inducible transcript 4-like protein protein-coding 625999252 Rab27b RAB27B, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); multivesicular body sorting pathway (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Neoplasm Invasiveness (ortholog); platelet storage pool deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); Golgi apparatus (ortholog); Golgi stack (ortholog) 15 61092723 61282292 + 22301074;30032202 116884993 MODEL JAAIVD010000010;XM_032886219 XP_032742110 ras-related protein Rab-27B protein-coding 625999263 Pou3f4 POU class 3 homeobox 4 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN cochlea morphogenesis (ortholog); forebrain neuron differentiation (ortholog); inner ear development (ortholog); ASSOCIATED WITH Deafness (ortholog); Ependymomas (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) X 61930587 61942925 + 22301074;30032202 116889134 MODEL JAAIVD010000014;XM_032890307 XP_032746198 POU domain, class 3, transcription factor 4 protein-coding 625999269 Cpt2 carnitine palmitoyltransferase 2 ENCODES a protein that exhibits acyltransferase activity (ortholog); carnitine O-palmitoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); carnitine shuttle (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine palmitoyltransferase I deficiency pathway; carnitine-acylcarnitine translocase deficiency; ASSOCIATED WITH brain disease (ortholog); carnitine palmitoyltransferase II deficiency (ortholog); Carnitine Palmitoyltransferase II Deficiency, Infantile (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 1 46909973 46926894 + 30032202 116899198 MODEL JAAIVD010000025;XM_032900786 XP_032756677 carnitine O-palmitoyltransferase 2, mitochondrial protein-coding 625999278 Lrrc52 leucine rich repeat containing 52 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN establishment of localization in cell (ortholog); positive regulation of voltage-gated potassium channel activity (ortholog); potassium ion transmembrane transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) 10 46763848 46786220 - 30032202 116911787 MODEL JAAIVD010000005;XM_032915782 XP_032771673 leucine-rich repeat-containing protein 52 protein-coding 625999282 LOC116899907 small Cajal body-specific RNA 14 4 3645261 3645395 + 116899907 MODEL JAAIVD010000003;XR_004387879 ncrna 625999285 LOC116912297 acidic leucine-rich nuclear phosphoprotein 32 family member A-like 11 29227160 29227879 + 116912297 MODEL JAAIVD010000006 pseudo 625999286 LOC116910946 complement component receptor 1-like protein 10 78768412 78812959 - 116910946 MODEL JAAIVD010000005;XM_032914683 XP_032770574 protein-coding 625999300 LOC116894230 developmental pluripotency-associated protein 4-like 2 108638646 108639540 - 116894230 MODEL JAAIVD010000001 pseudo 625999301 Tmem94 transmembrane protein 94 ENCODES a protein that exhibits P-type magnesium transporter activity (ortholog); INVOLVED IN embryonic brain development (ortholog); embryonic heart tube development (ortholog); intracellular magnesium ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Intellectual Developmental Disorder with Cardiac Defects and Dysmorphic Facies (ortholog); Nervous System Malformations (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 9 68265680 68289989 - 116908604 MODEL JAAIVD010000002;XM_032911827 XP_032767718 protein-coding 625999336 LOC116892638 serine/threonine-protein kinase 24-like 2 176352284 176353945 - 22301074 116892638 MODEL JAAIVD010000001;XM_032894458 XP_032750349 protein-coding 625999341 Usp54 ubiquitin specific peptidase 54 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K63-linked deubiquitinase activity (ortholog) 12 90352710 90423991 - 22301074 116913309 MODEL JAAIVD010000007;XM_032917446 XP_032773337 inactive ubiquitin carboxyl-terminal hydrolase 54 protein-coding 625999367 LOC116906092 nucleolar RNA helicase 2-like 7 72068334 72072021 + 116906092 MODEL JAAIVD010000026 pseudo 625999368 Dtx3 deltex E3 ubiquitin ligase 3 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 1 205626145 205629752 - 30032202 116909890 MODEL JAAIVD010000025;XM_032913635;XM_032913644 XP_032769526;XP_032769535 probable E3 ubiquitin-protein ligase DTX3 protein-coding 625999380 Hadhb hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); lncRNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); fatty acid beta-oxidation (ortholog); gene expression (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial inner membrane (ortholog) 7 23849455 23883220 - 22301074;30032202 116906012 MODEL JAAIVD010000026;XM_032909052;XM_032909053 XP_032764943;XP_032764944 trifunctional enzyme subunit beta, mitochondrial protein-coding 625999403 Dvl3 dishevelled segment polarity protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); frizzled binding (ortholog); protease binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); autosomal dominant Robinow syndrome 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 5355659 5372916 + 22301074;30032202 116898692 MODEL JAAIVD010000003;XM_032899950 XP_032755841 segment polarity protein dishevelled homolog DVL-3 protein-coding 625999422 Pnkd PNKD metallo-beta-lactamase domain containing INVOLVED IN negative regulation of neurotransmitter secretion (ortholog); neuromuscular process controlling posture (ortholog); regulation of dopamine metabolic process (ortholog); ASSOCIATED WITH dystonia (ortholog); genetic disease (ortholog); paroxysmal nonkinesigenic dyskinesia 1 (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); presynaptic cytosol (ortholog) 4 147737023 147805908 + 22301074;30032202 116899496 MODEL JAAIVD010000003;XM_032901332;XM_032901333;XM_032901334 XP_032757223;XP_032757224;XP_032757225 probable hydrolase PNKD protein-coding 625999442 LOC116892240 interferon-stimulated 20 kDa exonuclease-like 2 2 156201816 156203840 + 22301074;30032202 116892240 MODEL JAAIVD010000001;XM_032893810 XP_032749701 protein-coding 625999447 LOC116911829 U1 spliceosomal RNA 10 42429585 42429710 + 116911829 MODEL JAAIVD010000005 pseudo 625999448 LOC116893162 nuclear receptor-binding factor 2-like 2 102015861 102017987 + 116893162 MODEL JAAIVD010000001 pseudo 625999449 LOC116887892 collagen alpha-1(III) chain-like X 51503551 51506436 + 116887892 MODEL JAAIVD010000014;XM_032889370 XP_032745261 protein-coding 625999455 LOC116889651 ATP synthase subunit alpha-like 22301074;30032202 116889651 MODEL JAAIVD010000045;XM_032890555 XP_032746446 protein-coding 625999456 LOC116894903 U6 spliceosomal RNA 2 23844790 23844893 + 116894903 MODEL JAAIVD010000001;XR_004387106 snrna 625999459 LOC116887999 interferon alpha-1-like 1 65502174 65502750 - 22301074;30032202 116887999 MODEL JAAIVD010000025;XM_032889424 XP_032745315 protein-coding 625999463 Slc5a9 solute carrier family 5 member 9 1 44507245 44530663 - 22301074;30032202 116898934 MODEL JAAIVD010000025;XM_032900353 XP_032756244 sodium/glucose cotransporter 4 protein-coding 625999481 Otoa otoancorin INVOLVED IN cell-matrix adhesion (ortholog); multicellular organism growth (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 22 (ortholog); autosomal recessive nonsyndromic deafness 7 (ortholog); FOUND IN apical plasma membrane (ortholog) 2 80636562 80701892 - 30032202 116893914 MODEL JAAIVD010000001;XM_032895636 XP_032751527 protein-coding 625999512 Cldn20 claudin 20 FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 2 195231140 195231973 - 30032202 116892865 MODEL JAAIVD010000001;XM_032894767 XP_032750658 claudin-20 protein-coding 625999516 LOC116900549 olfactory receptor 4K3-like 5 89792135 89793240 - 116900549 MODEL JAAIVD010000023 pseudo 625999517 LOC116903535 pre-mRNA-splicing factor ISY1 homolog 6 58478689 58499114 + 22301074;30032202 116903535 MODEL JAAIVD010000024;XM_032906148 XP_032762039 protein-coding 625999532 LOC116898173 transmembrane protein 19-like 4 126197547 126198143 + 116898173 MODEL JAAIVD010000003 pseudo 625999533 Vma22 vacuolar ATPase assembly factor VMA22 INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type IIo (ortholog); genetic disease (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 4 110664261 110669229 - 30032202 116899275 MODEL JAAIVD010000003;XM_032900904 XP_032756795 Ccdc115 coiled-coil domain containing 115;coiled-coil domain-containing protein 115 protein-coding 625999542 LOC116901543 cytochrome c, testis-specific 5 53700648 53707684 - 22301074;30032202 116901543 MODEL JAAIVD010000023;XM_032903527 XP_032759418 protein-coding 625999550 Lrrc66 leucine rich repeat containing 66 11 30395322 30420986 - 116912186 MODEL JAAIVD010000006;XM_032916121 XP_032772012 leucine-rich repeat-containing protein 66 protein-coding 625999559 LOC116910713 small nucleolar RNA SNORA17 9 18385163 18385292 + 116910713 MODEL JAAIVD010000002;XR_004389240 snorna 625999562 Rapgef5 Rap guanine nucleotide exchange factor 5 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); dilated cardiomyopathy 1A (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 118371912 118602313 - 22301074;30032202 116905397 MODEL JAAIVD010000026;XM_032908351 XP_032764242 protein-coding 625999592 Atp6v1b1 ATPase H+ transporting V1 subunit B1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton transmembrane transporter activity (ortholog); INVOLVED IN adult behavior (ortholog); ATP metabolic process (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH autosomal recessive distal renal tubular acidosis 3 with or without sensorineural hearing loss (ortholog); autosomal recessive nonsyndromic deafness (ortholog); Distal Renal Tubular Acidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 6 62489928 62507530 - 22301074 116902748 MODEL JAAIVD010000024;XM_032905096 XP_032760987 V-type proton ATPase subunit B, kidney isoform protein-coding 625999608 LOC116900383 uncharacterized LOC116900383 1 65221918 65251265 - 116900383 MODEL JAAIVD010000025;XR_004387930 ncrna 625999613 Rpusd1 RNA pseudouridine synthase domain containing 1 ASSOCIATED WITH prostate cancer (ortholog) 9 2992802 2996720 + 22301074 116909822 MODEL JAAIVD010000002;XM_032913535;XM_032913537;XM_032913538 XP_032769426;XP_032769428;XP_032769429 RNA pseudouridylate synthase domain-containing protein 1 protein-coding 625999627 Cgn cingulin ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); epithelial cell morphogenesis (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); nonsyndromic deafness (ortholog); FOUND IN apical junction complex (ortholog); bicellular tight junction (ortholog); brush border (ortholog) 3 62486149 62505969 + 22301074 116896581 MODEL JAAIVD010000012;XM_032897807 XP_032753698 protein-coding 625999651 LOC116894219 olfactory receptor 502-like 2 106636193 106637137 - 116894219 MODEL JAAIVD010000001 pseudo 625999652 LOC116892326 60S ribosomal protein L36-like 2 165696440 165696782 + 116892326 MODEL JAAIVD010000001 pseudo 625999653 LOC116897476 U7 small nuclear RNA 3 154715852 154715911 + 116897476 MODEL JAAIVD010000012;XR_004387501 snrna 625999656 Erbin erbb2 interacting protein ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); negative regulation of monocyte chemotactic protein-1 production (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cytoplasm (ortholog) 3 193445428 193546124 + 22301074;30032202 116897235 MODEL JAAIVD010000012;XM_032898960 XP_032754851 protein-coding 625999688 LOC116884646 40S ribosomal protein S10-like 15 66010400 66011216 - 116884646 MODEL JAAIVD010000010 pseudo 625999689 LOC116894852 U6 spliceosomal RNA 2 199968284 199968390 - 116894852 MODEL JAAIVD010000001;XR_004387067 snrna 625999692 Borcs8 BLOC-1 related complex subunit 8 INVOLVED IN heart development (ortholog); ASSOCIATED WITH NEURODEGENERATION, INFANTILE-ONSET, WITH OPTIC ATROPHY AND BRAIN ABNORMALITIES (ortholog); FOUND IN BORC complex (ortholog) 13 12407188 12413795 + 30032202 116914445 MODEL JAAIVD010000008;XM_032918745;XM_032918746 XP_032774636;XP_032774637 BLOC-1-related complex subunit 8 protein-coding 625999704 LOC116907562 putative olfactory receptor 10D4 8 82466738 82467676 + 22301074 116907562 MODEL JAAIVD010000027;XM_032910586 XP_032766477 protein-coding 625999708 LOC116895702 glyceraldehyde-3-phosphate dehydrogenase-like 3 211100528 211101544 - 116895702 MODEL JAAIVD010000012 pseudo 625999709 Aurkaip1 aurora kinase A interacting protein 1 INVOLVED IN positive regulation of proteolysis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 4801451 4803178 - 30032202 116891723 MODEL JAAIVD010000025;XM_032893019;XM_032893026;XM_032893035;XM_032893043 XP_032748910;XP_032748917;XP_032748926;XP_032748934 aurora kinase A-interacting protein protein-coding 625999726 Fbn1 fibrillin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); heparin binding (ortholog); INVOLVED IN activation of protein kinase A activity (ortholog); camera-type eye development (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH achondroplasia (ortholog); acromicric dysplasia (ortholog); Albuminuria (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 5 103629989 103826898 - 22301074 116901903 MODEL JAAIVD010000023;XM_032904117 XP_032760008 fibrillin-1 protein-coding 625999795 Slc18a3 solute carrier family 18 member A3 ENCODES a protein that exhibits acetylcholine transmembrane transporter activity (ortholog); acetylcholine:proton antiporter activity (ortholog); monoamine:proton antiporter activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); acetylcholine uptake (ortholog); neurotransmitter loading into synaptic vesicle (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Binge Drinking (ortholog); FOUND IN AP-1 adaptor complex (ortholog); AP-2 adaptor complex (ortholog); axon (ortholog) 13 8173081 8175938 - 22301074;30032202 116914557 MODEL JAAIVD010000008;X80395;XM_032918906 CAA56604;XP_032774797 vesicular acetylcholine transporter protein-coding 625999800 LOC116893416 vomeronasal type-2 receptor 26-like 2 174535775 174575273 - 22301074;30032202 116893416 MODEL JAAIVD010000001;XM_032895198 XP_032751089 protein-coding 625999809 Acot13 acyl-CoA thioesterase 13 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN negative regulation of cold-induced thermogenesis (ortholog); protein homotetramerization (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 14 43862962 43875221 - 30032202 116883774 MODEL JAAIVD010000009;XM_032885018 XP_032740909 acyl-coenzyme A thioesterase 13 protein-coding 625999816 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 30756858 30756928 + 116886804 MODEL JAAIVD010000011 trna 625999817 LOC116912321 vomeronasal type-2 receptor 116-like 11 19090018 19097005 - 22301074;30032202 116912321 MODEL JAAIVD010000006;XM_032916351;XM_032916352;XM_032916353;XM_032916354 XP_032772242;XP_032772243;XP_032772244;XP_032772245 protein-coding 625999833 LOC116899337 uncharacterized LOC116899337 4 118861726 118866700 + 116899337 MODEL JAAIVD010000003;XR_004387718 ncrna 625999838 Ppm1g protein phosphatase, Mg2+/Mn2+ dependent 1G ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN peptidyl-threonine dephosphorylation (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 22863000 22883528 + 22301074;30032202 116905976 MODEL JAAIVD010000026;XM_032908987 XP_032764878 protein phosphatase 1G protein-coding 625999852 Otc ornithine transcarbamylase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); ornithine carbamoyltransferase activity (ortholog); INVOLVED IN ammonium homeostasis (ortholog); citrulline biosynthetic process (ortholog); L-ornithine catabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH Acidoses (ortholog); Alcoholic Liver Diseases (ortholog); Animal Hepatitis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) X 10932257 11012170 - 22301074;30032202 116888595 MODEL JAAIVD010000014;XM_032889894 XP_032745785 ornithine carbamoyltransferase;ornithine carbamoyltransferase, mitochondrial protein-coding 625999867 LOC116900615 mortality factor 4-like protein 1 5 104980131 104980547 + 30032202 116900615 MODEL JAAIVD010000023;XM_032902334 XP_032758225 protein-coding 625999870 LOC116912736 C-X-C motif chemokine 3 11 4221146 4222611 + 22301074;30032202 116912736 MODEL JAAIVD010000006;XM_032916878 XP_032772769 protein-coding 625999878 LOC116910455 olfactory receptor 3A1-like 9 92970813 92971748 + 116910455 MODEL JAAIVD010000002 pseudo 625999879 Cpq carboxypeptidase Q ENCODES a protein that exhibits metallodipeptidase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); proteolysis (ortholog); thyroid hormone generation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); renal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 1 206895743 207143445 + 30032202 116910393 MODEL JAAIVD010000025;XM_032914237 XP_032770128 protein-coding 625999888 LOC116902323 EKC/KEOPS complex subunit Tp53rk 5 151174132 151176850 - 22301074;30032202 116902323 MODEL JAAIVD010000023;XM_032904774 XP_032760665 protein-coding 625999894 LOC116913207 60S ribosomal protein L26-like 12 67988811 67989224 - 116913207 MODEL JAAIVD010000007 pseudo 625999895 Bsph1 binder of sperm protein homolog 1 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN sperm capacitation (ortholog); FOUND IN cell surface (ortholog) 2 173542192 173570576 - 30032202 116893410 MODEL JAAIVD010000001;XM_032895192 XP_032751083 protein-coding 625999900 LOC116890574 small nucleolar RNA SNORA17 1 62355717 62355848 + 116890574 MODEL JAAIVD010000025;XR_004386740 snorna 625999903 LOC116887001 40S ribosomal protein S26-like 18 16715622 16715870 + 22301074;30032202 116887001 MODEL JAAIVD010000013;XM_032888483 XP_032744374 protein-coding 625999906 LOC116889483 small Cajal body-specific RNA 24 X 51849744 51849866 + 116889483 MODEL JAAIVD010000014;XR_004386434 ncrna 625999909 LOC116894288 28S ribosomal protein S18c, mitochondrial-like 2 131770074 131770502 - 116894288 MODEL JAAIVD010000001 pseudo 625999910 Slc7a4 solute carrier family 7 member 4 4 2825153 2829679 - 22301074;30032202 116898645 MODEL JAAIVD010000003;XM_032899871;XM_032899872;XM_032899873 XP_032755762;XP_032755763;XP_032755764 cationic amino acid transporter 4 protein-coding 625999926 Tpcn2 two pore segment channel 2 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); endocytosis involved in viral entry into host cell (ortholog); endosome to lysosome transport of low-density lipoprotein particle (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH brain infarction (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Skin/Hair/Eye Pigmentation, Variation In, 10 (ortholog); FOUND IN endolysosome membrane (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) 2 4452791 4482103 + 22301074;30032202 116890814 MODEL JAAIVD010000001;XM_032891311 XP_032747202 two pore calcium channel protein 2 protein-coding 625999955 LOC116913282 pantothenate kinase 3-like 12 87555254 87556359 + 116913282 MODEL JAAIVD010000007 pseudo 625999956 Il7 interleukin 7 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 3 141791934 141837388 - 22301074 116897023 MODEL JAAIVD010000012;XM_032898635;XM_032898636 XP_032754526;XP_032754527 interleukin-7 protein-coding 625999971 Dpp8 dipeptidyl peptidase 8 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); INVOLVED IN CARD8 inflammasome complex assembly (ortholog); negative regulation of programmed cell death (ortholog); NLRP1 inflammasome complex assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 59336436 59391029 + 22301074;30032202 116908148 MODEL JAAIVD010000027;XM_032911443;XM_032911444;XM_032911445;XM_032911446 XP_032767334;XP_032767335;XP_032767336;XP_032767337 protein-coding 626000007 LOC116909905 olfactory receptor 2AK2-like 9 39291086 39292006 + 22301074 116909905 MODEL JAAIVD010000002;XM_032913657 XP_032769548 protein-coding 626000010 LOC116885456 protein kinase C iota type-like 1 79122152 79123513 - 116885456 MODEL JAAIVD010000025 pseudo 626000011 LOC116908468 U6 spliceosomal RNA 8 67309369 67309474 + 116908468 MODEL JAAIVD010000027;XR_004388985 snrna 626000014 C2H19orf81 chromosome 2 C19orf81 homolog 2 155154708 155169512 + 30032202 116892218 MODEL JAAIVD010000001;XM_032893779;XM_032893780;XM_032893781 XP_032749670;XP_032749671;XP_032749672 putative uncharacterized protein C19orf81 homolog protein-coding 626000031 LOC116912958 small nucleolar RNA SNORA24 11 80365256 80365388 - 116912958 MODEL JAAIVD010000006;XR_004389525 snorna 626000034 LOC116913838 40S ribosomal protein S16-like 12 10704001 10704456 + 116913838 MODEL JAAIVD010000007 pseudo 626000035 Cd200r1 CD200 receptor 1 ENCODES a protein that exhibits protein binding involved in heterotypic cell-cell adhesion (ortholog); signaling receptor activity (ortholog); INVOLVED IN heterotypic cell-cell adhesion (ortholog); negative regulation of interleukin-6 production (ortholog); negative regulation of macrophage migration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 29639810 29681350 + 30032202 116897884 MODEL JAAIVD010000003;XM_032899290 XP_032755181 cell surface glycoprotein CD200 receptor 1 protein-coding 626000046 Cldnd2 claudin domain containing 2 ASSOCIATED WITH COVID-19 (ortholog) 2 156034693 156037338 - 30032202 116894366 MODEL JAAIVD010000001;XM_032896070 XP_032751961 claudin domain-containing protein 2 protein-coding 626000055 Tmem145 transmembrane protein 145 2 169399190 169409225 - 22301074 116892462 MODEL JAAIVD010000001;XM_032894178 XP_032750069 protein-coding 626000073 Thada THADA armadillo repeat containing ENCODES a protein that exhibits enzyme regulator activity (ortholog); INVOLVED IN lipid homeostasis (ortholog); negative regulation of endoplasmic reticulum calcium ion concentration (ortholog); tRNA methylation (ortholog); ASSOCIATED WITH Meniere's disease (ortholog); type 2 diabetes mellitus (ortholog) 7 8442187 8749479 + 30032202 116905781 MODEL JAAIVD010000026;XM_032908756 XP_032764647 thyroid adenoma-associated protein protein-coding 626000114 LOC116895019 small nucleolar RNA SNORA17 2 163745125 163745256 + 116895019 MODEL JAAIVD010000001;XR_004387205 snorna 626000117 LOC116893182 olfactory receptor 52N2-like 2 103682630 103685825 + 22301074 116893182 MODEL JAAIVD010000001;XM_032895086 XP_032750977 protein-coding 626000121 Tmem53 transmembrane protein 53 INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of ossification (ortholog); negative regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH craniotubular dysplasia Ikegawa type (ortholog); FOUND IN nuclear membrane (ortholog); nuclear outer membrane (ortholog) 1 40867274 40882426 + 116898667 MODEL JAAIVD010000025;XM_032899909;XM_032899919;XM_032899927;XM_032899936;XM_032899940 XP_032755800;XP_032755810;XP_032755818;XP_032755827;XP_032755831 protein-coding 626000141 Cds1 CDP-diacylglycerol synthase 1 ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol biosynthetic process (ortholog); lipid droplet formation (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 11 11941624 12004217 + 22301074;30032202 116912223 MODEL JAAIVD010000006;XM_032916180 XP_032772071 phosphatidate cytidylyltransferase 1 protein-coding 626000158 LOC116904645 U6 spliceosomal RNA 6 6706318 6706424 - 116904645 MODEL JAAIVD010000024;XR_004388348 snrna 626000161 Acmsd aminocarboxymuconate semialdehyde decarboxylase ENCODES a protein that exhibits aminocarboxymuconate-semialdehyde decarboxylase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-tryptophan catabolic process (ortholog); negative regulation of quinolinate biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); kidney failure (ortholog); Puromycin Aminonucleoside Nephrosis (ortholog); FOUND IN cytosol (ortholog) 10 7945664 7993702 - 22301074;30032202 116911650 MODEL JAAIVD010000005;XM_032915604 XP_032771495 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase protein-coding 626000173 LOC116894237 vomeronasal type-2 receptor 116-like 2 112850914 112898012 - 116894237 MODEL JAAIVD010000001 pseudo 626000174 LOC116892885 breast cancer metastasis-suppressor 1 homolog 2 198677384 198677909 - 116892885 MODEL JAAIVD010000001 pseudo 626000175 LOC116895573 60S ribosomal protein L13-like 3 134544756 134545363 - 116895573 MODEL JAAIVD010000012 pseudo 626000176 Chtf18 chromosome transmission fidelity factor 18 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN germ cell development (ortholog); male meiotic nuclear division (ortholog); negative regulation of chromosome segregation (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 2984486 2992510 - 22301074 116909888 MODEL JAAIVD010000002;XM_032913628 XP_032769519 chromosome transmission fidelity protein 18 homolog protein-coding 626000202 LOC116897876 40S ribosomal protein S11-like 4 22707199 22707686 + 116897876 MODEL JAAIVD010000003 pseudo 626000203 LOC116886193 40S ribosomal protein S15a-like 17 24927524 24928398 + 116886193 MODEL JAAIVD010000011 pseudo 626000204 LOC116908959 uncharacterized LOC116908959 9 86053714 86061379 - 116908959 MODEL JAAIVD010000002;XR_004389042 ncrna 626000209 LOC116886100 cytochrome c oxidase subunit 4 isoform 1, mitochondrial INVOLVED IN response to nutrient (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 16 (ortholog); mitochondrial metabolism disease (ortholog); protein-energy malnutrition (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 17 40311189 40317414 + 22301074;30032202 116886100 MODEL JAAIVD010000011;XM_032887429 XP_032743320 protein-coding 626000217 LOC116885851 chromobox protein homolog 3-like 16 3294203 3306378 + 116885851 MODEL JAAIVD010000004 pseudo 626000218 Pcbd2 pterin-4 alpha-carbinolamine dehydratase 2 ENCODES a protein that exhibits identical protein binding (ortholog); phenylalanine 4-monooxygenase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 14 74044566 74098084 + 22301074;30032202 116883255 MODEL JAAIVD010000009;XM_032884251 XP_032740142 pterin-4-alpha-carbinolamine dehydratase 2 protein-coding 626000226 LOC116898121 putative uncharacterized protein encoded by MAPKAPK5-AS1 1 29250654 29251388 + 116898121 MODEL JAAIVD010000025;XM_032899719 XP_032755610 protein-coding 626000230 Mapk8 mitogen-activated protein kinase 8 ENCODES a protein that exhibits enzyme binding (ortholog); histone deacetylase binding (ortholog); histone deacetylase regulator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amyloid-beta (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Liver Failure (ortholog); Acute Otitis Media (ortholog); FOUND IN axon (ortholog); basal dendrite (ortholog); cytoplasm (ortholog) 13 9106121 9183372 - 22301074;30032202 116914776 MODEL JAAIVD010000008;XM_032919223;XM_032919224;XM_032919225 XP_032775114;XP_032775115;XP_032775116 protein-coding 626000255 LOC116891414 vomeronasal type-1 receptor 2-like 2 70762666 70763616 + 22301074;30032202 116891414 MODEL JAAIVD010000001;XM_032892440 XP_032748331 protein-coding 626000259 Rab5c RAB5C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTPase activity (ortholog); INVOLVED IN endocytosis (ortholog); endosomal transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 41 (ortholog); genetic disease (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); exocytic vesicle (ortholog) 9 60007267 60029985 - 22301074 116908962 MODEL JAAIVD010000002;XM_032912422 XP_032768313 ras-related protein Rab-5C protein-coding 626000269 LOC116899222 cofilin-1-like 4 89856284 89857059 + 116899222 MODEL JAAIVD010000003 pseudo 626000270 LOC116899712 myosin regulatory light chain 12B 4 180439911 180456184 - 22301074;30032202;8034049 116899712 MODEL JAAIVD010000003;XM_032901748;Z31721 XP_032757639 protein-coding 626000278 Tamm41 TAM41 mitochondrial translocator assembly and maintenance homolog ENCODES a protein that exhibits phosphatidate cytidylyltransferase activity (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 56 (ortholog); Deglutition Disorders (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 31627863 31660781 + 22301074;30032202 116903389 MODEL JAAIVD010000024;XM_032905886;XM_032905887 XP_032761777;XP_032761778 phosphatidate cytidylyltransferase, mitochondrial protein-coding 626000293 LOC116897801 40S ribosomal protein S7-like 4 5301567 5302149 + 116897801 MODEL JAAIVD010000003 pseudo 626000294 LOC116908920 olfactory receptor 1468-like 9 92810920 92811840 + 22301074;30032202 116908920 MODEL JAAIVD010000002;XM_032912377 XP_032768268 protein-coding 626000297 Otud1 OTU deubiquitinase 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein K63-linked deubiquitination (ortholog) 14 4416889 4420466 - 30032202 116883765 MODEL JAAIVD010000009;XM_032885011 XP_032740902 OTU domain-containing protein 1 protein-coding 626000302 Krt71 keratin 71 INVOLVED IN hair follicle morphogenesis (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH alopecia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN keratin filament (ortholog) 1 261326601 261335363 + 22301074;30032202 116890208 MODEL JAAIVD010000025;XM_032890943 XP_032746834 keratin, type II cytoskeletal 71 protein-coding 626000315 LOC116894893 U6 spliceosomal RNA 2 23350975 23351081 + 116894893 MODEL JAAIVD010000001;XR_004387099 snrna 626000318 LOC116888226 NHP2-like protein 1 X 129589053 129589554 + 116888226 MODEL JAAIVD010000014 pseudo 626000319 Src SRC proto-oncogene, non-receptor tyrosine kinase ENCODES a protein that exhibits BMP receptor binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN adherens junction organization (ortholog); angiotensin-activated signaling pathway (ortholog); behavioral response to cocaine (ortholog); PARTICIPATES IN altered Reelin signaling pathway; dopamine signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); brain ischemia (ortholog); Breast Neoplasms (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); caveola (ortholog) 5 136801406 136816184 + 22301074;30032202 116902226 MODEL JAAIVD010000023;XM_032904630;XM_032904631 XP_032760521;XP_032760522 proto-oncogene tyrosine-protein kinase Src protein-coding 626000336 Guca2a guanylate cyclase activator 2A ENCODES a protein that exhibits guanylate cyclase activator activity (ortholog) 1 37336523 37338292 - 22301074;30032202 116897383 MODEL JAAIVD010000025;XM_032899130 XP_032755021 guanylin protein-coding 626000343 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92662933 92663004 + 116904833 MODEL JAAIVD010000024 trna 626000344 LOC116889771 apolipoprotein L3-like 22301074;30032202 116889771 MODEL JAAIVD010000148;XM_032890629 XP_032746520 protein-coding 626000345 LOC116893695 olfactory receptor 5B2-like 2 13003054 13004031 + 22301074;30032202 116893695 MODEL JAAIVD010000001;XM_032895412 XP_032751303 protein-coding 626000348 Lrpprc leucine rich pentatricopeptide repeat containing ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); mRNA binding (ortholog); INVOLVED IN mitochondrial mRNA polyadenylation (ortholog); negative regulation of mitochondrial mRNA catabolic process (ortholog); negative regulation of mitochondrial RNA catabolic process (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH epilepsy (ortholog); French Canadian Leigh disease (ortholog); genetic disease (ortholog); FOUND IN condensed nuclear chromosome (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 7 8118972 8202147 + 22301074 116905776 MODEL JAAIVD010000026;XM_032908751 XP_032764642 leucine-rich PPR motif-containing protein, mitochondrial protein-coding 626000390 Mtmr9 myotubularin related protein 9 ENCODES a protein that exhibits enzyme regulator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of phosphatase activity (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Metabolic Syndrome (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) 12 60851378 60876807 + 30032202 116913333 MODEL JAAIVD010000007;XM_032917481 XP_032773372 myotubularin-related protein 9 protein-coding 626000404 LOC116901216 mitochondrial mRNA pseudouridine synthase Trub2-like 5 6945413 6948831 + 22301074;30032202 116901216 MODEL JAAIVD010000023;XM_032902933 XP_032758824 protein-coding 626000412 LOC116906855 zinc finger protein 883-like 1 156644521 156669271 + 30032202 116906855 MODEL JAAIVD010000025;XM_032909756 XP_032765647 protein-coding 626000422 LOC116904513 phosphatidylinositol transfer protein 6 6554016 6554977 - 116904513 MODEL JAAIVD010000024 pseudo 626000423 LOC116904683 U1 spliceosomal RNA 6 60814107 60814265 - 116904683 MODEL JAAIVD010000024;XR_004388381 snrna 626000426 LOC116889894 non-histone chromosomal protein HMG-14-like 1 159550125 159550418 + 22301074;30032202 116889894 MODEL JAAIVD010000025;XM_032890717 XP_032746608 protein-coding 626000429 Ahr aryl hydrocarbon receptor ENCODES a protein that exhibits arachidonate omega-hydroxylase activity (ortholog); aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); blood circulation (ortholog); blood vessel development (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); Adult Pancreatic Cancer (ortholog); alcohol dependence (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog) 7 48820977 48857599 - 22301074;30032202 116904970 MODEL JAAIVD010000026;XM_032907649 XP_032763540 protein-coding 626000444 F5 coagulation factor V INVOLVED IN blood circulation (ortholog); blood coagulation (ortholog); response to vitamin K (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); blood coagulation disease (ortholog); brain ischemia (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); platelet alpha granule (ortholog) 10 43388854 43458797 + 22301074 116911657 MODEL JAAIVD010000005;XM_032915612;XM_032915613 XP_032771503;XP_032771504 protein-coding 626000476 Ppp1cb protein phosphatase 1 catalytic subunit beta ENCODES a protein that exhibits myosin-light-chain-phosphatase activity (ortholog); phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH Dandy-Walker syndrome (ortholog); genetic disease (ortholog); Noonan syndrome (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 21671817 21704192 - 30032202 116905958 MODEL JAAIVD010000026;XM_032908962;XM_032908963 XP_032764853;XP_032764854 serine/threonine-protein phosphatase PP1-beta catalytic subunit protein-coding 626000492 LOC116902867 peroxiredoxin-1-like 6 97961430 97962017 + 30032202 116902867 MODEL JAAIVD010000024;XM_032905197 XP_032761088 protein-coding 626000496 Cd19 CD19 molecule INVOLVED IN antigen receptor-mediated signaling pathway (ortholog); B cell mediated immunity (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); common variable immunodeficiency (ortholog); common variable immunodeficiency 2 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 2 75513529 75519947 + 30032202 116893906 MODEL JAAIVD010000001;XM_032895630;XM_032895631;XM_032895632 XP_032751521;XP_032751522;XP_032751523 B-lymphocyte antigen CD19 protein-coding 626000521 Tkt transketolase ENCODES a protein that exhibits calcium ion binding (ortholog); carbohydrate binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN D-xylulose 5-phosphate biosynthetic process (ortholog); glyceraldehyde-3-phosphate biosynthetic process (ortholog); pentose-phosphate shunt (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - non-oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); nuclear body (ortholog) 13 6240675 6264175 + 30032202 116914302 MODEL JAAIVD010000008;XM_032918543 XP_032774434 protein-coding 626000539 Ctcfl CCCTC-binding factor like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone binding (ortholog); INVOLVED IN establishment of protein localization to chromatin (ortholog); genomic imprinting (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 5 144875698 144898873 + 116900750 MODEL JAAIVD010000023;XM_032902456;XM_032902457 XP_032758347;XP_032758348 transcriptional repressor CTCFL protein-coding 626000557 LOC116891886 olfactory receptor 5B12-like 2 13460991 13461870 - 116891886 MODEL JAAIVD010000001 pseudo 626000558 Btg1 BTG anti-proliferation factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of endothelial cell differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); juvenile rheumatoid arthritis (ortholog); multiple myeloma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 175839694 175842295 + 30032202 116908522 MODEL JAAIVD010000025;XM_032911702 XP_032767593 protein BTG1 protein-coding 626000564 C1H1orf87 chromosome 1 C1orf87 homolog FOUND IN axoneme (ortholog); cilium (ortholog) 1 57684617 57747329 + 116887786 MODEL JAAIVD010000025;XM_032889320;XM_032889325 XP_032745211;XP_032745216 uncharacterized protein C1orf87 homolog protein-coding 626000579 LOC116894980 small nucleolar RNA SNORA44 2 55159029 55159157 + 116894980 MODEL JAAIVD010000001;XR_004387171 snorna 626000582 LOC116900349 cyclin-dependent kinase 4 inhibitor B 1 64963291 64968776 + 30032202 116900349 MODEL JAAIVD010000025;XM_032902106 XP_032757997 protein-coding 626000588 LOC116889917 olfactory receptor 6C76-like 1 160594937 160595872 + 22301074;30032202 116889917 MODEL JAAIVD010000025;XM_032890735 XP_032746626 protein-coding 626000591 Ulk4 unc-51 like kinase 4 INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); axoneme assembly (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); intellectual disability (ortholog); multiple myeloma (ortholog); FOUND IN cilium (ortholog) 8 112170902 112458718 - 22301074 116907965 MODEL JAAIVD010000027;XM_032911193 XP_032767084 serine/threonine-protein kinase ULK4 protein-coding 626000632 Rnf133 ring finger protein 133 INVOLVED IN protein autoubiquitination (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 6 115619027 115620661 + 116904040 MODEL JAAIVD010000024;XM_032906896 XP_032762787 E3 ubiquitin-protein ligase RNF133 protein-coding 626000637 LOC116897867 stefin-2-like 4 21155345 21159964 - 22301074;30032202 116897867 MODEL JAAIVD010000003;XM_032899273 XP_032755164 protein-coding 626000644 LOC116914954 ral guanine nucleotide dissociation stimulator-like 13 11873418 11875204 + 116914954 MODEL JAAIVD010000008 pseudo 626000645 LOC116906691 ribosome biogenesis protein NSA2 homolog 8 269335 270134 + 116906691 MODEL JAAIVD010000027 pseudo 626000646 Nectin4 nectin cell adhesion molecule 4 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN negative regulation of natural killer cell mediated cytotoxicity (ortholog); ASSOCIATED WITH Ectodermal Dysplasia-Syndactyly Syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN adherens junction (ortholog); plasma membrane (ortholog) 10 50541041 50557856 + 22301074;30032202 116911700 MODEL JAAIVD010000005;XM_032915664;XM_032915665 XP_032771555;XP_032771556 nectin-4 protein-coding 626000660 Rem1 RRAD and GEM like GTPase 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); regulation of skeletal muscle contraction by calcium ion signaling (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN I band (ortholog); T-tubule (ortholog) 5 131957650 131965030 + 22301074;30032202 116900703 MODEL JAAIVD010000023;XM_032902406 XP_032758297 GTP-binding protein REM 1 protein-coding 626000668 LOC116894136 olfactory receptor 52E8-like 2 103995401 103996352 + 116894136 MODEL JAAIVD010000001 pseudo 626000669 LOC116895015 small nucleolar RNA SNORA48 2 145236914 145237053 - 116895015 MODEL JAAIVD010000001;XR_004387202 snorna 626000672 Inha inhibin subunit alpha ENCODES a protein that exhibits inhibin binding (ortholog); protein-containing complex binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN hemoglobin biosynthetic process (ortholog); male gonad development (ortholog); negative regulation of follicle-stimulating hormone secretion (ortholog); ASSOCIATED WITH dysgerminoma (ortholog); embryonal carcinoma (ortholog); Endometrial Neoplasms (ortholog); FOUND IN extracellular space (ortholog); inhibin A complex (ortholog); inhibin B complex (ortholog) 4 148855647 148858841 + 22301074;30032202 116899537 MODEL JAAIVD010000003;XM_032901415 XP_032757306 inhibin alpha chain protein-coding 626000678 LOC116887679 28S ribosomal protein S7, mitochondrial-like 18 12161382 12162075 - 116887679 MODEL JAAIVD010000013 pseudo 626000679 Supt16h SPT16 homolog, facilitates chromatin remodeling subunit INVOLVED IN nucleosome disassembly (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH dextrocardia (ortholog); genetic disease (ortholog); neurodevelopmental disorder with dysmorphic facies and thin corpus callosum (ortholog); FOUND IN FACT complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 71693128 71730033 + 30032202 116913591 MODEL JAAIVD010000007;XM_032917826 XP_032773717 FACT complex subunit SPT16 protein-coding 626000709 Srrt serrate, RNA effector molecule ENCODES a protein that exhibits DNA binding (ortholog); mRNA cap binding complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN neuronal stem cell population maintenance (ortholog); positive regulation of neurogenesis (ortholog); primary miRNA processing (ortholog); ASSOCIATED WITH glioblastoma (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 16 16723030 16736452 + 22301074;30032202 116885200 MODEL JAAIVD010000004;XM_032886426;XM_032886427;XM_032886428;XM_032886430 XP_032742317;XP_032742318;XP_032742319;XP_032742321 serrate RNA effector molecule homolog protein-coding 626000738 Aatf apoptosis antagonizing transcription factor ENCODES a protein that exhibits leucine zipper domain binding (ortholog); protein kinase binding (ortholog); tau protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); embryonic cleavage (ortholog); negative regulation of amyloid precursor protein biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 86180185 86271549 + 22301074;30032202 116908884 MODEL JAAIVD010000002;XM_032912330 XP_032768221 protein AATF protein-coding 626000755 Edn2 endothelin 2 ENCODES a protein that exhibits endothelin B receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery smooth muscle contraction (ortholog); axon extension (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH Aortic Rupture (ortholog); Bradycardia (ortholog); Dissecting Aneurysm (ortholog); FOUND IN extracellular space (ortholog) 1 36818685 36824371 - 22301074;30032202 116897350 MODEL JAAIVD010000025;XM_032899111 XP_032755002 endothelin-2 protein-coding 626000764 Cd164l2 CD164 molecule like 2 1 25025722 25039267 - 30032202 116895283 MODEL JAAIVD010000025;XM_032896599;XM_032896606;XM_032896613;XM_032896618;XM_032896624;XM_032896629 XP_032752490;XP_032752497;XP_032752504;XP_032752509;XP_032752515;XP_032752520 CD164 sialomucin-like 2 protein protein-coding 626000788 Zbtb7a zinc finger and BTB domain containing 7A ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); genetic disease (ortholog); glioblastoma (ortholog); FOUND IN cytoplasm (ortholog); DNA-dependent protein kinase complex (ortholog); nucleus (ortholog) 1 153734489 153743359 - 22301074;30032202 116904565 MODEL JAAIVD010000025;XM_032907367 XP_032763258 zinc finger and BTB domain-containing protein 7A protein-coding 626000794 Mettl25b methyltransferase like 25B 3 65628609 65636409 + 116896710 MODEL JAAIVD010000012;XM_032898125 XP_032754016 Rrnad1 protein RRNAD1;ribosomal RNA adenine dimethylase domain containing 1 protein-coding 626000806 Man1a2 mannosidase alpha class 1A member 2 INVOLVED IN glycoprotein metabolic process (ortholog); lung alveolus development (ortholog); respiratory gaseous exchange by respiratory system (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 3 57387112 57533229 + 22301074;30032202 116896466 MODEL JAAIVD010000012;XM_032897628 XP_032753519 mannosyl-oligosaccharide 1,2-alpha-mannosidase IB protein-coding 626000823 Arap3 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of Rac protein signal transduction (ortholog); negative regulation of Rho protein signal transduction (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); ruffle (ortholog) 15 6923907 6949931 + 22301074;30032202 116884678 MODEL JAAIVD010000010;XM_032885854 XP_032741745 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 3 protein-coding 626000860 Kat7 lysine acetyltransferase 7 ENCODES a protein that exhibits DNA replication origin binding (ortholog); histone acetyltransferase activity (ortholog); histone H3K14 acetyltransferase activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); internal peptidyl-lysine acetylation (ortholog); natural killer cell differentiation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH androgen insensitivity syndrome (ortholog); breast cancer (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); histone acetyltransferase complex (ortholog) 9 59074094 59107891 + 22301074 116908702 MODEL JAAIVD010000002;XM_032912032;XM_032912033;XM_032912034;XM_032912036 XP_032767923;XP_032767924;XP_032767925;XP_032767927 histone acetyltransferase KAT7 protein-coding 626000887 LOC116912475 uncharacterized LOC116912475 11 68419181 68420750 - 116912475 MODEL JAAIVD010000006;XR_004389462 ncrna 626000891 Ccdc91 coiled-coil domain containing 91 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi to lysosome transport (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) 6 5137049 5307959 + 30032202 116903102 MODEL JAAIVD010000024;XM_032905426 XP_032761317 coiled-coil domain-containing protein 91 protein-coding 626000908 LOC116891639 cytochrome c, somatic-like 2 87992280 87992592 + 116891639 MODEL JAAIVD010000001 pseudo 626000909 LOC116901635 ATP synthase F(0) complex subunit C1, mitochondrial-like 5 66097854 66099409 - 116901635 MODEL JAAIVD010000023 pseudo 626000910 LOC116910706 small nucleolar RNA SNORA48 9 31378894 31379034 - 116910706 MODEL JAAIVD010000002;XR_004389233 snorna 626000913 LOC116906436 small nucleolar RNA SNORA48 7 55548635 55548780 + 116906436 MODEL JAAIVD010000026;XR_004388696 snorna 626000916 LOC116906608 uncharacterized LOC116906608 8 31305693 31307483 - 116906608 MODEL JAAIVD010000027;XM_032909365 XP_032765256 uncharacterized protein LOC116906608 protein-coding 626000921 LOC116885262 60S ribosomal protein L32-like 16 30746540 30753302 + 116885262 MODEL JAAIVD010000004 pseudo 626000922 Zdhhc7 zDHHC palmitoyltransferase 7 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); glucose import in response to insulin stimulus (ortholog); negative regulation of catabolic process (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 17 39728372 39734694 - 30032202 116886304 MODEL JAAIVD010000011;XM_032887748 XP_032743639 palmitoyltransferase ZDHHC7;zinc finger DHHC-type palmitoyltransferase 7 protein-coding 626000932 LOC116912916 deoxycytidine kinase-like 11 93397574 93398351 - 22301074;30032202 116912916 MODEL JAAIVD010000006;XM_032917177 XP_032773068 protein-coding 626000935 Acer3 alkaline ceramidase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN ceramide catabolic process (ortholog); inflammatory response (ortholog); myelination (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Colitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); membrane (ortholog) 2 96492627 96581272 - 22301074;30032202 116891712 MODEL JAAIVD010000001;XM_032892983;XM_032892984;XM_032892985 XP_032748874;XP_032748875;XP_032748876 protein-coding 626000956 Pak4 p21 (RAC1) activated kinase 4 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN dendritic spine development (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) 2 167404476 167442990 + 22301074;30032202 116892385 MODEL JAAIVD010000001;XM_032894051 XP_032749942 serine/threonine-protein kinase PAK 4 protein-coding 626000970 Cldn6 claudin 6 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); plasma membrane (ortholog) 9 987701 988683 + 22301074;30032202 116909755 MODEL JAAIVD010000002;XM_032913441 XP_032769332 claudin-6 protein-coding 626000975 Tmem174 transmembrane protein 174 INVOLVED IN phosphate ion homeostasis (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum membrane (ortholog) 3 197968351 197969262 + 116895674 MODEL JAAIVD010000012;XM_032896878 XP_032752769 protein-coding 626000979 Pawr pro-apoptotic WT1 regulator ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); leucine zipper domain binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) 1 186551436 186631083 + 30032202 116908796 MODEL JAAIVD010000025;XM_032912196 XP_032768087 PRKC apoptosis WT1 regulator protein protein-coding 626000990 Dym dymeclin ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN bone development (ortholog); Golgi organization (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); Dyggve-Melchior-Clausen disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 15 56681711 56961451 - 30032202 116884841 MODEL JAAIVD010000010;XM_032886077;XM_032886079;XM_032886080 XP_032741968;XP_032741970;XP_032741971 protein-coding 626001014 LOC116883567 histone H2A type 1-B 14 42682680 42683257 - 22301074;30032202 116883567 MODEL JAAIVD010000009;XM_032884749 XP_032740640 protein-coding 626001019 Eml3 EMAP like 3 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); regulation of mitotic spindle assembly (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); midbody (ortholog) 2 9001452 9012631 - 30032202 116890916 MODEL JAAIVD010000001;XM_032891545;XM_032891546 XP_032747436;XP_032747437 echinoderm microtubule-associated protein-like 3 protein-coding 626001047 LOC116885902 NXPE family member 3-like 16 15649260 16109949 + 116885902 MODEL JAAIVD010000004;XM_032887219 XP_032743110 protein-coding 626001053 Gcc1 GRIP and coiled-coil domain containing 1 ASSOCIATED WITH cannabis abuse (ortholog); Cocaine-Related Disorders (ortholog); phencyclidine abuse (ortholog) 6 111114429 111121781 + 30032202 116904027 MODEL JAAIVD010000024;XM_032906857 XP_032762748 GRIP and coiled-coil domain-containing protein 1 protein-coding 626001060 LOC116895755 60S ribosomal protein L7a-like 3 39660054 39681877 + 116895755 MODEL JAAIVD010000012 pseudo 626001061 LOC116895795 60S ribosomal protein L7a-like 3 61204207 61205021 - 116895795 MODEL JAAIVD010000012 pseudo 626001062 Dst dystonin ENCODES a protein that exhibits integrin binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell motility (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); cell leading edge (ortholog) 4 110161980 110558831 + 22301074;30032202 116899272 MODEL JAAIVD010000003;XM_032900894;XM_032900895;XM_032900896;XM_032900898;XM_032900899;XM_032900900;XM_032900901 XP_032756785;XP_032756786;XP_032756787;XP_032756789;XP_032756790;XP_032756791;XP_032756792 protein-coding 626001186 Kifc2 kinesin family member C2 1 248987676 248995423 + 22301074;30032202 116913316 MODEL JAAIVD010000025;XM_032917465;XM_032917471;XM_032917479 XP_032773356;XP_032773362;XP_032773370 kinesin-like protein KIFC2 protein-coding 626001213 LOC116895639 uncharacterized LOC116895639 3 176927829 176932180 - 116895639 MODEL JAAIVD010000012;XR_004387296 ncrna 626001219 LOC116886986 cytoplasmic phosphatidylinositol transfer protein 1-like 18 48661157 48662253 - 116886986 MODEL JAAIVD010000013 pseudo 626001220 LOC116901064 zinc finger protein 120-like 5 142499625 142501466 + 116901064 MODEL JAAIVD010000023 pseudo 626001221 Epha4 EPH receptor A4 ENCODES a protein that exhibits DH domain binding (ortholog); ephrin receptor activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN adherens junction organization (ortholog); adult walking behavior (ortholog); axon guidance (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); axonal growth cone (ortholog) 4 150608437 150751233 - 22301074;30032202 116899542 MODEL JAAIVD010000003;XM_032901430;XM_032901431;XM_032901432 XP_032757321;XP_032757322;XP_032757323 ephrin type-A receptor 4 protein-coding 626001250 LOC116889209 uncharacterized LOC116889209 X 4900033 4930905 + 116889209 MODEL JAAIVD010000014;XR_004386368 ncrna 626001255 LOC116908812 E3 SUMO-protein ligase NSE2-like 9 33565720 33566754 - 22301074;30032202 116908812 MODEL JAAIVD010000002;XM_032912217 XP_032768108 protein-coding 626001260 Scnm1 sodium channel modifier 1 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); ASSOCIATED WITH orofaciodigital syndrome XIX (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 3 62116227 62120630 + 30032202 116896566 MODEL JAAIVD010000012;XM_032897774;XM_032897775 XP_032753665;XP_032753666 protein-coding 626001274 Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 ENCODES a protein that exhibits DNA binding (ortholog); DNA/DNA annealing activity (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 20 (ortholog); Animal Disease Models (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 1 259837057 259843169 - 22301074 116883249 MODEL JAAIVD010000025;XM_032884250;XM_032884256;XR_004385733;XR_004385734 XP_032740141;XP_032740147 protein-coding 626001294 Kiaa0319l KIAA0319 like INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); neuron migration (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) 1 31454338 31546641 - 30032202 116896553 MODEL JAAIVD010000025;XM_032897749;XM_032897757 XP_032753640;XP_032753648 dyslexia-associated protein KIAA0319-like protein homolog protein-coding 626001322 Fbxw9 F-box and WD repeat domain containing 9 17 15225821 15232705 - 22301074;30032202 116886449 MODEL JAAIVD010000011;XM_032887948 XP_032743839 F-box/WD repeat-containing protein 9 protein-coding 626001336 Trex1 three prime repair exonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); adenyl deoxyribonucleotide binding (ortholog); INVOLVED IN activation of immune response (ortholog); adaptive immune response (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN DNA replication pathway; G2/M DNA damage checkpoint pathway; ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 1 (ortholog); brain disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 8 100326221 100327834 - 22301074;30032202 116907636 MODEL JAAIVD010000027;XM_032910699 XP_032766590 three-prime repair exonuclease 1 protein-coding 626001342 LOC116896417 60S ribosomal protein L21-like 3 52371260 52373454 + 22301074;30032202 116896417 MODEL JAAIVD010000012;XM_032897561 XP_032753452 protein-coding 626001347 Clca1 chloride channel accessory 1 INVOLVED IN cellular response to hypoxia (ortholog); ASSOCIATED WITH asbestosis (ortholog); asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN membrane (ortholog); microvillus (ortholog); secretory granule (ortholog) 3 15816494 15842378 + 22301074;30032202 116896185 MODEL JAAIVD010000012;XM_032897224 XP_032753115 calcium-activated chloride channel regulator 1 protein-coding 626001365 Podn podocan ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 1 46800712 46817904 + 22301074;30032202 116899190 MODEL JAAIVD010000025;XM_032900774 XP_032756665 protein-coding 626001381 LOC116897553 small nucleolar RNA SNORA17 3 159358250 159358381 + 116897553 MODEL JAAIVD010000012;XR_004387566 snorna 626001384 LOC116900492 olfactory receptor 4B1-like 5 71840314 71841240 - 22301074 116900492 MODEL JAAIVD010000023;XM_032902227 XP_032758118 protein-coding 626001387 LOC116913711 olfactory receptor 11G2-like 12 72801536 72802504 - 22301074 116913711 MODEL JAAIVD010000007;XM_032918008 XP_032773899 protein-coding 626001391 LOC116899781 U6 spliceosomal RNA 4 21115579 21115683 + 116899781 MODEL JAAIVD010000003;XR_004387791 snrna 626001394 Tpbg trophoblast glycoprotein INVOLVED IN cell chemotaxis (ortholog); dendrite arborization (ortholog); mesenchymal cell migration (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dendrite (ortholog) 8 79895508 79899234 + 22301074;30032202 116907647 MODEL JAAIVD010000027;XM_032910716;XM_032910717 XP_032766607;XP_032766608 protein-coding 626001403 LOC116888433 olfactory receptor 10K1-like X 128008434 128009372 + 22301074 116888433 MODEL JAAIVD010000014;XM_032889709 XP_032745600 protein-coding 626001406 LOC116883170 uncharacterized LOC116883170 14 52698208 52700186 + 116883170 MODEL JAAIVD010000009;XR_004385731 ncrna 626001410 Cytip cytohesin 1 interacting protein INVOLVED IN regulation of cell adhesion (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 35949256 36019399 - 22301074;30032202 116901426 MODEL JAAIVD010000023;XM_032903318;XM_032903319;XM_032903320 XP_032759209;XP_032759210;XP_032759211 cytohesin-interacting protein protein-coding 626001429 C8H11orf52 chromosome 8 C11orf52 homolog ASSOCIATED WITH Carney-Stratakis syndrome (ortholog) 8 45204055 45210586 - 30032202 116906829 MODEL JAAIVD010000027;XM_032909714 XP_032765605 uncharacterized protein C11orf52 homolog protein-coding 626001437 Trmt1l tRNA methyltransferase 1L ENCODES a protein that exhibits tRNA (guanine(27)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN adult behavior (ortholog); adult locomotory behavior (ortholog); tRNA N2-guanine methylation (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 10 30856917 30888477 + 22301074;30032202 116911082 MODEL JAAIVD010000005;XM_032914864;XM_032914865;XM_032914866;XM_032914867 XP_032770755;XP_032770756;XP_032770757;XP_032770758 TRMT1-like protein;tRNA methyltransferase 1 like protein-coding 626001465 Spem2 SPEM family member 2 9 49423416 49425262 - 116908598 MODEL JAAIVD010000002;XM_032911821 XP_032767712 uncharacterized protein SPEM2 protein-coding 626001472 Atp5f1d ATP synthase F1 subunit delta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Aortic Calcification (ortholog); Cardiomegaly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 1 154730221 154736496 - 22301074;30032202 116905366 MODEL JAAIVD010000025;XM_032908295 XP_032764186 ATP synthase subunit delta, mitochondrial protein-coding 626001482 Tmem62 transmembrane protein 62 5 99106479 99141011 + 22301074 116901849 MODEL JAAIVD010000023;XM_032904036;XM_032904037;XM_032904038;XM_032904039 XP_032759927;XP_032759928;XP_032759929;XP_032759930 protein-coding 626001509 Deaf1 DEAF1 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); embryonic skeletal system development (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 2 8149730 8181584 + 22301074;30032202 116890875 MODEL JAAIVD010000001;XM_032891457;XM_032891458;XM_032891459 XP_032747348;XP_032747349;XP_032747350 deformed epidermal autoregulatory factor 1 homolog protein-coding 626001532 Tada2b transcriptional adaptor 2B PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN SAGA-type complex (ortholog) 11 68622385 68633644 + 22301074;30032202 116912143 MODEL JAAIVD010000006;XM_032916057 XP_032771948 transcriptional adapter 2-beta protein-coding 626001538 Optn optineurin ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to L-glutamate (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); amyotrophic lateral sclerosis type 12 (ortholog); FOUND IN axon (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 14 11368481 11413630 - 22301074;30032202 116883160 MODEL JAAIVD010000009;XM_032884184;XM_032884185;XM_032884186;XM_032884187 XP_032740075;XP_032740076;XP_032740077;XP_032740078 protein-coding 626001565 Hmx1 H6 family homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog) 11 69676710 69687308 - 22301074;30032202 116912755 MODEL JAAIVD010000006;XM_032916905;XM_032916906 XP_032772796;XP_032772797 homeobox protein HMX1 protein-coding 626001572 LOC116904425 DCC-interacting protein 13-alpha-like 6 112552303 112553088 + 116904425 MODEL JAAIVD010000024 pseudo 626001573 LOC116910726 small nucleolar RNA SNORA26 9 62818039 62818159 - 116910726 MODEL JAAIVD010000002;XR_004389246 snorna 626001576 LOC116904995 eukaryotic translation initiation factor 2 subunit 1-like 7 57192886 57194054 + 116904995 MODEL JAAIVD010000026 pseudo 626001577 LOC116906467 U1 spliceosomal RNA 7 45454040 45454187 - 116906467 MODEL JAAIVD010000026 pseudo 626001578 Rph3al rabphilin 3A like (without C2 domains) ENCODES a protein that exhibits LIM domain binding (ortholog); INVOLVED IN establishment of localization in cell (ortholog); glucose homeostasis (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN secretory granule (ortholog) 9 94552465 94695895 - 22301074 116909873 MODEL JAAIVD010000002;XM_032913605;XM_032913606;XM_032913607;XM_032913608 XP_032769496;XP_032769497;XP_032769498;XP_032769499 rab effector Noc2 protein-coding 626001602 LOC116910006 40S ribosomal protein S15-like 9 95539600 95540048 - 116910006 MODEL JAAIVD010000002 pseudo 626001603 Tbce tubulin folding cofactor E INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); developmental growth (ortholog); ASSOCIATED WITH bacterial infectious disease (ortholog); Craniofacial Abnormalities (ortholog); disorder of sexual development (ortholog) 14 32735422 32778881 - 30032202 116883986 MODEL JAAIVD010000009;XM_032885221;XM_032885222;XR_004385804;XR_004385805 XP_032741112;XP_032741113 tubulin-specific chaperone E protein-coding 626001631 LOC116894679 trace amine-associated receptor 9 2 210202045 210203085 - 22301074;30032202 116894679 MODEL JAAIVD010000001;XM_032896383 XP_032752274 protein-coding 626001635 Etfrf1 electron transfer flavoprotein regulatory factor 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of oxidative phosphorylation (ortholog); FOUND IN mitochondrion (ortholog) 6 2972333 2979057 + 22301074;30032202 116903080 MODEL JAAIVD010000024;XM_032905400 XP_032761291 protein-coding 626001643 Dkk2 dickkopf WNT signaling pathway inhibitor 2 ENCODES a protein that exhibits co-receptor binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN extracellular space (ortholog) 3 26747387 26839706 - 22301074;30032202 116895316 MODEL JAAIVD010000012;XM_032896626 XP_032752517 dickkopf-related protein 2 protein-coding 626001651 Pfn4 profilin family member 4 INVOLVED IN acrosome assembly (ortholog); flagellated sperm motility (ortholog); manchette assembly (ortholog) 7 25423589 25434287 + 30032202 116906285 MODEL JAAIVD010000026;XM_032909173 XP_032765064 profilin-4 protein-coding 626001659 LOC116904723 small nucleolar RNA SNORA17 6 53463190 53463303 - 116904723 MODEL JAAIVD010000024 pseudo 626001660 LOC116893320 serum amyloid A-2 protein-like 2 152617460 152621696 - 22301074 116893320 MODEL JAAIVD010000001;XM_032895139 XP_032751030 protein-coding 626001667 LOC116897005 ras-related protein Rab-5C-like 3 134635746 134636654 - 116897005 MODEL JAAIVD010000012 pseudo 626001668 LOC116895101 U2 spliceosomal RNA 2 81845822 81846000 + 116895101 MODEL JAAIVD010000001 pseudo 626001669 LOC116895226 guanylate-binding protein 1-like 3 18148167 18180285 + 22301074;30032202 116895226 MODEL JAAIVD010000012;XM_032896554 XP_032752445 protein-coding 626001686 LOC116898373 sorbitol dehydrogenase-like 4 64284620 64298634 - 116898373 MODEL JAAIVD010000003 pseudo 626001687 Lipg lipase G, endothelial type ENCODES a protein that exhibits phospholipase A1 activity (ortholog); phospholipase activity (ortholog); triacylglycerol lipase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); high-density lipoprotein particle remodeling (ortholog); phospholipid homeostasis (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); cardiovascular system disease (ortholog); cerebral infarction (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); extracellular space (ortholog) 15 57026373 57048968 + 22301074 116884768 MODEL JAAIVD010000010;XM_032885985 XP_032741876 endothelial lipase protein-coding 626001701 LOC116886532 transcription factor BTF3-like 17 10934091 10934567 + 30032202 116886532 MODEL JAAIVD010000011;XM_032888053 XP_032743944 protein-coding 626001704 LOC116893928 glyceraldehyde-3-phosphate dehydrogenase-like 2 82578378 82579303 - 116893928 MODEL JAAIVD010000001 pseudo 626001705 Agpat1 1-acylglycerol-3-phosphate O-acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN phosphatidic acid biosynthetic process (ortholog); positive regulation of cytokine production (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH exfoliation syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 18 7287171 7295817 + 22301074;30032202 116886829 MODEL JAAIVD010000013;XM_032888263;XM_032888264;XM_032888265;XM_032888266;XM_032888267;XM_032888268 XP_032744154;XP_032744155;XP_032744156;XP_032744157;XP_032744158;XP_032744159 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha protein-coding 626001730 LOC116894014 olfactory receptor 52Z1 2 101838929 101839891 + 22301074 116894014 MODEL JAAIVD010000001;XM_032895729 XP_032751620 protein-coding 626001733 LOC116895936 cullin-2-like 3 128069529 128072656 - 116895936 MODEL JAAIVD010000012 pseudo 626001734 Rictor RPTOR independent companion of MTOR complex 2 ENCODES a protein that exhibits ATP binding (ortholog); enzyme-substrate adaptor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cGAS/STING signaling pathway (ortholog); embryo development ending in birth or egg hatching (ortholog); PARTICIPATES IN mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); colon cancer (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog); plasma membrane (ortholog) 3 173692627 173785358 - 30032202 116897146 MODEL JAAIVD010000012;XM_032898812;XM_032898813 XP_032754703;XP_032754704 rapamycin-insensitive companion of mTOR protein-coding 626001778 LOC116914786 myeloid-associated differentiation marker-like 13 30219006 30221201 + 30032202 116914786 MODEL JAAIVD010000008;XM_032919233 XP_032775124 protein-coding 626001783 LOC116895285 uncharacterized LOC116895285 3 11313054 11314203 - 116895285 MODEL JAAIVD010000012;XR_004387268 ncrna 626001787 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92692562 92692633 + 116904837 MODEL JAAIVD010000024 trna 626001788 LOC116883205 transcriptional adapter 3-like 14 41674919 41676476 - 116883205 MODEL JAAIVD010000009 pseudo 626001789 Camk2n2 calcium/calmodulin dependent protein kinase II inhibitor 2 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; FOUND IN synapse (ortholog) 4 5443970 5446147 - 30032202 116898699 MODEL JAAIVD010000003;XM_032899962 XP_032755853 calcium/calmodulin-dependent protein kinase II inhibitor 2 protein-coding 626001795 Ank1 ankyrin 1 ENCODES a protein that exhibits ATPase binding (ortholog); cytoskeletal anchor activity (ortholog); enzyme binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); erythrocyte development (ortholog); inorganic cation transmembrane transport (ortholog); ASSOCIATED WITH anemia (ortholog); bone development disease (ortholog); genetic disease (ortholog); FOUND IN A band (ortholog); ankyrin-1 complex (ortholog); axolemma (ortholog) 13 63276424 63452509 - 22301074 116915086 MODEL JAAIVD010000008;XM_032919511;XM_032919512;XM_032919513;XM_032919514 XP_032775402;XP_032775403;XP_032775404;XP_032775405 ankyrin-1 protein-coding 626001855 LOC116914651 40S ribosomal protein S3-like 13 55247194 55247913 + 116914651 MODEL JAAIVD010000008 pseudo 626001856 LOC116911711 ubiquitin-like protein FUBI 10 90235963 90236330 + 116911711 MODEL JAAIVD010000005 pseudo 626001857 LOC116900099 ficolin-1 5 11550565 11553711 + 30032202 116900099 MODEL JAAIVD010000023;XM_032901878 XP_032757769 protein-coding 626001871 Bambi BMP and activin membrane bound inhibitor ENCODES a protein that exhibits frizzled binding (ortholog); INVOLVED IN cell migration (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); Cardiomegaly (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 14 29951485 29956307 + 22301074;30032202 116883870 MODEL JAAIVD010000009;XM_032885136 XP_032741027 BMP and activin membrane-bound inhibitor homolog protein-coding 626001878 Rpa3 replication protein A3 ENCODES a protein that exhibits damaged DNA binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); DNA replication (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN DNA replication factor A complex (ortholog) 6 130142686 130145829 + 22301074;30032202 116904080 MODEL JAAIVD010000024;XM_032906947 XP_032762838 replication protein A 14 kDa subunit protein-coding 626001886 LOC116883239 jupiter microtubule associated homolog 1-like 14 61457511 61464264 - 116883239 MODEL JAAIVD010000009 pseudo 626001887 LOC116900298 olfactory receptor 8K3-like 5 63717168 63718109 - 22301074;30032202 116900298 MODEL JAAIVD010000023;XM_032902053 XP_032757944 protein-coding 626001890 Ajap1 adherens junctions associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of cell-matrix adhesion (ortholog); negative regulation of wound healing (ortholog); regulation of polarized epithelial cell differentiation (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); cell surface (ortholog) 1 7242029 7354263 + 30032202 116892192 MODEL JAAIVD010000025;XM_032893722 XP_032749613 adherens junction-associated protein 1 protein-coding 626001900 Ppp3cc protein phosphatase 3 catalytic subunit gamma ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin-dependent protein phosphatase activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); penetration of zona pellucida (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; ASSOCIATED WITH Genetic Predisposition to Disease (ortholog); keratoconus (ortholog); schizophrenia (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 12 54060886 54131359 + 30032202 116913809 MODEL JAAIVD010000007;XM_032918116;XM_032918117;XM_032918118;XM_032918119 XP_032774007;XP_032774008;XP_032774009;XP_032774010 serine/threonine-protein phosphatase 2B catalytic subunit gamma isoform protein-coding 626001932 Vps36 vacuolar protein sorting 36 homolog ENCODES a protein that exhibits ubiquitin binding (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); ESCRT II complex (ortholog) 13 64224134 64248775 - 22301074;30032202 116914586 MODEL JAAIVD010000008;XM_032918944 XP_032774835 vacuolar protein-sorting-associated protein 36 protein-coding 626001950 LOC116889608 UPF0547 protein C16orf87 homolog Y 1602650 1603108 + 116889608 MODEL JAAIVD010000015 pseudo 626001951 LOC116906330 U6 spliceosomal RNA 7 68260747 68260844 + 116906330 MODEL JAAIVD010000026 pseudo 626001952 LOC116904912 RNA-binding protein 34-like 7 38134315 38136131 - 116904912 MODEL JAAIVD010000026 pseudo 626001953 LOC116887607 RT1 class I histocompatibility antigen, AA alpha chain-like 18 9442403 9485034 + 116887607 MODEL JAAIVD010000013 pseudo 626001954 Eif4a1 eukaryotic translation initiation factor 4A1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; translation initiation pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear stress granule (ortholog); nucleus (ortholog) 9 49277928 49283652 - 22301074;30032202 116910474 MODEL JAAIVD010000002;XM_032914348 XP_032770239 eukaryotic initiation factor 4A-I protein-coding 626001969 Trerf1 transcriptional regulating factor 1 ENCODES a protein that exhibits nuclear progesterone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coactivator binding (ortholog); INVOLVED IN cellular response to progesterone stimulus (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 4 82521676 82565549 - 30032202 116899088 MODEL JAAIVD010000003;XM_032900590;XM_032900591;XM_032900592 XP_032756481;XP_032756482;XP_032756483 transcriptional-regulating factor 1 protein-coding 626001992 Spata7 spermatogenesis associated 7 INVOLVED IN microtubule cytoskeleton organization (ortholog); photoreceptor cell maintenance (ortholog); protein localization to photoreceptor connecting cilium (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); Leber congenital amaurosis (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); microtubule cytoskeleton (ortholog) 7 111784454 111829643 + 30032202 116905344 MODEL JAAIVD010000026;XM_032908245 XP_032764136 spermatogenesis-associated protein 7 protein-coding 626002008 Gli2 GLI family zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); axon guidance (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); Anorectal Malformations (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 10 11416793 11449759 - 30032202 116911658 MODEL JAAIVD010000005;XM_032915614 XP_032771505 zinc finger protein GLI2 protein-coding 626002023 Fgf22 fibroblast growth factor 22 INVOLVED IN regulation of synapse maturation (ortholog); trans-synaptic signaling (ortholog); FOUND IN cell surface (ortholog); extrinsic component of postsynaptic density membrane (ortholog); GABA-ergic synapse (ortholog) 1 155115453 155117627 - 22301074;30032202 116905660 MODEL JAAIVD010000025;XM_032908634;XM_032908644 XP_032764525;XP_032764535 protein-coding 626002032 C14H6orf62 chromosome 14 C6orf62 homolog 14 43848238 43859612 + 116883773 MODEL JAAIVD010000009;XM_032885016 XP_032740907 uncharacterized protein C6orf62 homolog protein-coding 626002041 Pop7 POP7 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog); ribonuclease MRP complex (ortholog) 16 16515752 16516873 + 22301074;30032202 116885743 MODEL JAAIVD010000004;XM_032887051 XP_032742942 POP7 homolog, ribonuclease P/MRP subunit;ribonuclease P protein subunit p20 protein-coding 626002047 Clcn1 chloride voltage-gated channel 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); chloride transport (ortholog); muscle contraction (ortholog); ASSOCIATED WITH Becker disease (ortholog); cerebral palsy (ortholog); Charcot-Marie-Tooth disease intermediate type (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog) 6 97903383 97932823 - 22301074;30032202 116903895 MODEL JAAIVD010000024;XM_032906656;XM_032906657;XM_032906658;XM_032906659;XM_032906660 XP_032762547;XP_032762548;XP_032762549;XP_032762550;XP_032762551 chloride channel protein 1 protein-coding 626002085 Hspa2 heat shock protein family A (Hsp70) member 2 ENCODES a protein that exhibits enzyme binding (ortholog); glycolipid binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN male meiosis I (ortholog); male meiotic nuclear division (ortholog); negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Myocardial Ischemia (ortholog); FOUND IN CatSper complex (ortholog); cell surface (ortholog); cytosol (ortholog) 7 90564173 90566693 + 22301074;30032202 116905182 MODEL JAAIVD010000026;XM_032907966 XP_032763857 heat shock-related 70 kDa protein 2 protein-coding 626002090 Mal2 mal, T cell differentiation protein 2 FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane raft (ortholog) 1 229013972 229043797 + 22301074;30032202 116911457 MODEL JAAIVD010000025;XM_032915430;XM_032915439 XP_032771321;XP_032771330 protein MAL2 protein-coding 626002103 Pik3cb phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit beta ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); insulin receptor substrate binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); embryonic cleavage (ortholog); endothelial cell proliferation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); diffuse large B-cell lymphoma (ortholog); endometrial cancer (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); midbody (ortholog) 8 90377917 90480574 - 22301074;30032202 116907124 MODEL JAAIVD010000027;XM_032910098;XM_032910099;XM_032910100 XP_032765989;XP_032765990;XP_032765991 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit beta isoform protein-coding 626002138 LOC116908776 ATP-binding cassette sub-family A member 8-A 9 79205161 79274675 + 22301074;30032202 116908776 MODEL JAAIVD010000002;XM_032912148 XP_032768039 protein-coding 626002181 Epha7 EPH receptor A7 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); chemorepellent activity (ortholog); ephrin receptor binding (ortholog); INVOLVED IN brain development (ortholog); branching morphogenesis of a nerve (ortholog); ephrin receptor signaling pathway (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); Hemorrhage (ortholog); lung small cell carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 113864540 114019632 - 22301074;30032202 116902416 MODEL JAAIVD010000025;XM_032904949;XM_032904956;XM_032904964;XM_032904972 XP_032760840;XP_032760847;XP_032760855;XP_032760863 ephrin type-A receptor 7 protein-coding 626002214 Cyren cell cycle regulator of NHEJ ENCODES a protein that exhibits damaged DNA binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); immunoglobulin V(D)J recombination (ortholog); FOUND IN cytoplasm (ortholog); DNA repair complex (ortholog); nucleus (ortholog) 6 104777873 104780629 + 22301074;30032202 116903972 MODEL JAAIVD010000024;XM_032906773 XP_032762664 cell cycle regulator of non-homologous end joining protein-coding 626002221 LOC116893649 membrane-spanning 4-domains subfamily A member 6C-like 2 10928396 10936877 + 30032202 116893649 MODEL JAAIVD010000001;XM_032895366 XP_032751257 protein-coding 626002228 LOC116889953 olfactory receptor 6C3-like 1 161631565 161632504 - 22301074;30032202 116889953 MODEL JAAIVD010000025;XM_032890756 XP_032746647 protein-coding 626002231 LOC116909347 olfactory receptor 1361-like 9 38562183 38563145 - 22301074;30032202 116909347 MODEL JAAIVD010000002;XM_032912895 XP_032768786 protein-coding 626002234 Fibcd1 fibrinogen C domain containing 1 ENCODES a protein that exhibits chitin binding (ortholog); FOUND IN membrane (ortholog) 5 3793379 3824359 + 30032202 116901161 MODEL JAAIVD010000023;XM_032902805 XP_032758696 fibrinogen C domain-containing protein 1 protein-coding 626002245 LOC116910329 transmembrane protein 92-like 9 59525059 59526807 + 30032202 116910329 MODEL JAAIVD010000002;XM_032914189 XP_032770080 protein-coding 626002252 Abcd1 ATP binding cassette subfamily D member 1 ENCODES a protein that exhibits ABC-type fatty-acyl-CoA transporter activity (ortholog); ADP binding (ortholog); amide transmembrane transporter activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Addison's disease (ortholog); adrenoleukodystrophy (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lysosomal membrane (ortholog) X 128855719 128877545 - 22301074;30032202 116888324 MODEL JAAIVD010000014;XM_032889597 XP_032745488 ATP-binding cassette sub-family D member 1 protein-coding 626002266 LOC116885998 small nucleolar RNA SNORA15 16 24176658 24176787 - 116885998 MODEL JAAIVD010000004;XR_004386070 snorna 626002269 Lef1 lymphoid enhancer binding factor 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); beta-catenin binding (ortholog); C2H2 zinc finger domain binding (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); anatomical structure regression (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Animal Disease Models (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); basal cell carcinoma (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 27649802 27760165 - 30032202 116896244 MODEL JAAIVD010000012;XM_032897310;XM_032897311 XP_032753201;XP_032753202 lymphoid enhancer-binding factor 1 protein-coding 626002288 LOC116902864 olfactory receptor 2F1-like 6 97741027 97741968 + 22301074 116902864 MODEL JAAIVD010000024;XM_032905194 XP_032761085 protein-coding 626002291 LOC116900166 60S ribosomal protein L29 5 29170182 29170814 + 22301074;30032202 116900166 MODEL JAAIVD010000023;XM_032901927 XP_032757818 protein-coding 626002296 Asb2 ankyrin repeat and SOCS box containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog); Z disc (ortholog) 7 114608866 114644279 - 22301074;30032202 116905368 MODEL JAAIVD010000026;XM_032908301;XM_032908302;XM_032908303;XM_032908304;XM_032908305 XP_032764192;XP_032764193;XP_032764194;XP_032764195;XP_032764196 ankyrin repeat and SOCS box protein 2 protein-coding 626002322 LOC116884255 ATP synthase subunit g, mitochondrial-like 15 3008999 3009308 + 116884255 MODEL JAAIVD010000010 pseudo 626002323 LOC116912975 small nucleolar RNA SNORA17 11 21025278 21025409 - 116912975 MODEL JAAIVD010000006;XR_004389540 snorna 626002326 LOC116885793 uncharacterized LOC116885793 16 30827333 30833878 - 116885793 MODEL JAAIVD010000004;XR_004386044 ncrna 626002331 LOC116894060 olfactory receptor 51S1 2 102815459 102816430 - 22301074 116894060 MODEL JAAIVD010000001;XM_032895783 XP_032751674 protein-coding 626002334 Abtb2 ankyrin repeat and BTB domain containing 2 INVOLVED IN cellular response to toxic substance (ortholog) 5 81397623 81549722 + 22301074 116901687 MODEL JAAIVD010000023;XM_032903813 XP_032759704 ankyrin repeat and BTB/POZ domain-containing protein 2 protein-coding 626002355 LOC116893511 keratin, type I cytoskeletal 18-like 2 188903279 188904806 + 116893511 MODEL JAAIVD010000001 pseudo 626002356 LOC116893101 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61616196 61618687 + 22301074 116893101 MODEL JAAIVD010000001;XM_032895042 XP_032750933 protein-coding 626002363 LOC116904644 U6 spliceosomal RNA 6 50441636 50441737 + 116904644 MODEL JAAIVD010000024;XR_004388347 snrna 626002366 LOC116912692 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 11 18698382 18700683 + 116912692 MODEL JAAIVD010000006 pseudo 626002367 Rnf125 ring finger protein 125 ENCODES a protein that exhibits p53 binding (ortholog); ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of RIG-I signaling pathway (ortholog); negative regulation of type I interferon production (ortholog); ASSOCIATED WITH genetic disease (ortholog); Tenorio Syndrome (ortholog); FOUND IN Golgi membrane (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 15 22278947 22304629 + 30032202 116884675 MODEL JAAIVD010000010;XM_032885848 XP_032741739 E3 ubiquitin-protein ligase RNF125 protein-coding 626002377 App amyloid beta precursor protein ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); apolipoprotein binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN amyloid-beta complex (ortholog); apical part of cell (ortholog); astrocyte projection (ortholog) 4 57082470 57301243 + 22301074;2900758;30032202 116899034 MODEL JAAIVD010000003;X07648;XM_032900487;XM_032900488;XM_032900489;XM_032900490;XM_032900491;XM_032900492;XM_032900493;XM_032900494;XM_032900495 CAA30488;XP_032756378;XP_032756379;XP_032756380;XP_032756381;XP_032756382;XP_032756383;XP_032756384;XP_032756385;XP_032756386 amyloid-beta precursor protein protein-coding 626002417 Bcl10 BCL10 immune signaling adaptor ENCODES a protein that exhibits CARD domain binding (ortholog); general transcription initiation factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH colon carcinoma (ortholog); extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue (ortholog); follicular lymphoma (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); cytoplasmic microtubule (ortholog) 3 14956278 14965909 - 30032202 116896178 MODEL JAAIVD010000012;XM_032897216 XP_032753107 B-cell lymphoma/leukemia 10 protein-coding 626002424 Tecr trans-2,3-enoyl-CoA reductase ENCODES a protein that exhibits very-long-chain enoyl-CoA reductase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); sphingolipid metabolic process (ortholog); very long-chain fatty acid biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 14 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 17 16673853 16700606 + 22301074;30032202 116886120 MODEL JAAIVD010000011;XM_032887457;XM_032887458 XP_032743348;XP_032743349 very-long-chain enoyl-CoA reductase protein-coding 626002444 Npy4r2 neuropeptide Y receptor Y4-2 ENCODES a protein that exhibits pancreatic polypeptide receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); FOUND IN membrane (ortholog) 13 9915470 9916714 - 22301074;30032202 116915082 MODEL JAAIVD010000008;XM_032919506 XP_032775397 neuropeptide Y receptor type 4-2 protein-coding 626002449 LOC116884732 protocadherin alpha-13-like 15 7351632 7356310 - 22301074 116884732 MODEL JAAIVD010000010;XM_032885946 XP_032741837 protein-coding 626002454 Akap1 A-kinase anchoring protein 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); microtubule binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); apoptotic process (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); obesity (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial crista (ortholog) 9 81950984 81983462 + 22301074 116908645 MODEL JAAIVD010000002;XM_032911907;XM_032911908;XM_032911910 XP_032767798;XP_032767799;XP_032767801 A-kinase anchor protein 1, mitochondrial protein-coding 626002475 LOC116890600 small nucleolar RNA SNORA17 1 70668202 70668318 - 116890600 MODEL JAAIVD010000025 pseudo 626002476 LOC116904266 40S ribosomal protein S7-like 6 39333497 39334044 + 116904266 MODEL JAAIVD010000024 pseudo 626002477 Plcl1 phospholipase C like 1 (inactive) ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of cold-induced thermogenesis (ortholog); regulation of synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Experimental Liver Neoplasms (ortholog) 4 129820373 130153765 + 22301074;30032202 116899395 MODEL JAAIVD010000003;XM_032901120;XM_032901121 XP_032757011;XP_032757012 inactive phospholipase C-like protein 1 protein-coding 626002490 LOC116912616 40S ribosomal protein S26-like 11 17674423 17676150 - 22301074;30032202 116912616 MODEL JAAIVD010000006;XM_032916742 XP_032772633 protein-coding 626002494 Ddost dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN protein glycosylation (ortholog); protein N-linked glycosylation (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ir (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); oligosaccharyltransferase complex (ortholog) 1 19908177 19915584 - 22301074;30032202 116893922 MODEL JAAIVD010000025;XM_032895646 XP_032751537 dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit protein-coding 626002508 LOC116888065 interferon alpha-12-like 1 65607927 65608481 + 22301074;30032202 116888065 MODEL JAAIVD010000025;XM_032889449 XP_032745340 protein-coding 626002511 Otud7a OTU deubiquitinase 7A ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein K11-linked deubiquitination (ortholog); ASSOCIATED WITH chromosome 15q13.3 microdeletion syndrome (ortholog); language disorder (ortholog); learning disability (ortholog) 2 136597427 136697326 - 22301074;30032202 116892012 MODEL JAAIVD010000001;XM_032893474 XP_032749365 OTU domain-containing protein 7A protein-coding 626002527 LOC116909043 high mobility group protein B4-like 9 15131405 15137021 + 30032202 116909043 MODEL JAAIVD010000002;XM_032912524 XP_032768415 protein-coding 626002532 LOC116912228 UDP-glucuronosyltransferase 2B4-like 11 34614 52519 + 22301074 116912228 MODEL JAAIVD010000006;XM_032916187 XP_032772078 protein-coding 626002542 LOC116901248 uncharacterized LOC116901248 5 9646087 9647031 + 116901248 MODEL JAAIVD010000023;XR_004387967 ncrna 626002546 LOC116894027 olfactory receptor 51V1-like 2 102034669 102035613 + 22301074 116894027 MODEL JAAIVD010000001;XM_032895744 XP_032751635 protein-coding 626002549 LOC116885846 U1 small nuclear ribonucleoprotein C-like 16 2275701 2276179 + 116885846 MODEL JAAIVD010000004 pseudo 626002550 LOC116900717 mitochondrial import inner membrane translocase subunit Tim17-A-like 5 133375594 133376067 - 116900717 MODEL JAAIVD010000023 pseudo 626002551 LOC116888206 mitochondrial ornithine transporter 1-like X 126829532 126831197 - 116888206 MODEL JAAIVD010000014 pseudo 626002552 Acp5 acid phosphatase 5, tartrate resistant ENCODES a protein that exhibits acid phosphatase activity (ortholog); ferric iron binding (ortholog); ferrous iron binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); bone resorption (ortholog); cellular response to zinc ion starvation (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); Combined Immunodeficiency with Autoimmunity and Spondylometaphyseal Dysplasia (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog); lysosome (ortholog) 8 18381736 18387440 - 22301074;30032202 116907849 MODEL JAAIVD010000027;XM_032911038;XM_032911039 XP_032766929;XP_032766930 tartrate-resistant acid phosphatase type 5 protein-coding 626002564 Map4k2 mitogen-activated protein kinase kinase kinase kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); positive regulation of JNK cascade (ortholog); positive regulation of JUN kinase activity (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway 2 1329898 1345075 - 22301074;30032202 116890661 MODEL JAAIVD010000001;XM_032891059 XP_032746950 protein-coding 626002600 LOC116895495 uncharacterized LOC116895495 3 104415882 104451781 - 116895495 MODEL JAAIVD010000012;XR_004387281 ncrna 626002605 Cdc42se1 CDC42 small effector 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell junction (ortholog) 3 62012094 62019917 - 30032202 116896561 MODEL JAAIVD010000012;XM_032897756 XP_032753647 CDC42 small effector protein 1 protein-coding 626002614 Kcnf1 potassium voltage-gated channel modifier subfamily F member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN non-motile cilium assembly (ortholog); potassium ion transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN ciliary base (ortholog); voltage-gated potassium channel complex (ortholog) 7 36976516 36981164 - 22301074;30032202 116904897 MODEL JAAIVD010000026;XM_032907505 XP_032763396 potassium voltage-gated channel subfamily F member 1 protein-coding 626002619 LOC116895343 60S ribosomal protein L19-like 3 44421353 44421942 - 116895343 MODEL JAAIVD010000012 pseudo 626002620 Pygo1 pygopus family PHD finger 1 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); hematopoietic progenitor cell differentiation (ortholog); kidney development (ortholog); FOUND IN nucleus (ortholog) 8 67270278 67292858 + 116907021 MODEL JAAIVD010000027;XM_032909960 XP_032765851 pygopus homolog 1 protein-coding 626002627 Uba3 ubiquitin like modifier activating enzyme 3 ENCODES a protein that exhibits identical protein binding (ortholog); NEDD8 activating enzyme activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN endomitotic cell cycle (ortholog); mitotic cell cycle (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; FOUND IN nucleus (ortholog); protein-containing complex (ortholog) 6 49832340 49853586 + 22301074;30032202 116903475 MODEL JAAIVD010000024;XM_032906039;XM_032906040 XP_032761930;XP_032761931 NEDD8-activating enzyme E1 catalytic subunit protein-coding 626002652 Zc3h14 zinc finger CCCH-type containing 14 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); pre-mRNA binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); spermatogenesis (ortholog); spliceosome-depend formation of circular RNA (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 56 (ortholog); intellectual disability (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) 7 111904140 111941395 + 22301074;30032202 116905347 MODEL JAAIVD010000026;XM_032908247 XP_032764138 zinc finger CCCH domain-containing protein 14 protein-coding 626002672 LOC116899364 60S ribosomal protein L37-like 4 122017485 122017775 + 116899364 MODEL JAAIVD010000003 pseudo 626002673 LOC116890362 U6 spliceosomal RNA 1 38581731 38581834 - 116890362 MODEL JAAIVD010000025;XR_004386580 snrna 626002676 LOC116909332 40S ribosomal protein S2-like 9 26513963 26514819 + 116909332 MODEL JAAIVD010000002 pseudo 626002677 Mrln myoregulin ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); INVOLVED IN negative regulation of calcium ion import into sarcoplasmic reticulum (ortholog); response to wounding (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); sarcoplasmic reticulum membrane (ortholog) 18 16654135 16656823 - 116887521 MODEL JAAIVD010000013;XM_032889146 XP_032745037 protein-coding 626002683 Rbfox2 RNA binding fox-1 homolog 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cardiac conduction (ortholog); cellular response to angiotensin (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); congenital heart disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 249420693 249662180 - 30032202 116913549 MODEL JAAIVD010000025;XM_032917760;XM_032917767;XM_032917776;XM_032917783;XM_032917792;XM_032917799;XM_032917809;XM_032917817;XM_032917825;XM_032917836;XM_032917844;XM_032917851;XM_032917858;XM_032917865;XM_032917873;XM_032917882;XM_032917892;XM_032917899;XM_032917908;XM_032917914;XM_032917921;XM_032917929;XM_032917940;XM_032917948;XR_004389632 XP_032773651;XP_032773658;XP_032773667;XP_032773674;XP_032773683;XP_032773690;XP_032773700;XP_032773708;XP_032773716;XP_032773727;XP_032773735;XP_032773742;XP_032773749;XP_032773756;XP_032773764;XP_032773773;XP_032773783;XP_032773790;XP_032773799;XP_032773805;XP_032773812;XP_032773820;XP_032773831;XP_032773839 RNA binding protein fox-1 homolog 2 protein-coding 626002759 C3H5orf34 chromosome 3 C5orf34 homolog 3 177293017 177314774 - 116897169 MODEL JAAIVD010000012;XM_032898846 XP_032754737 uncharacterized protein C5orf34 homolog protein-coding 626002776 LOC116904531 ubiquitin-like 6 12365231 12365614 + 116904531 MODEL JAAIVD010000024 pseudo 626002777 Esrrg estrogen related receptor gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); estrogen response element binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of cold-induced thermogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Fetal Growth Retardation (ortholog); primary ovarian insufficiency (ortholog) 10 65910634 66336566 + 22301074 116911716 MODEL JAAIVD010000005;XM_032915687;XM_032915688;XM_032915690 XP_032771578;XP_032771579;XP_032771581 estrogen-related receptor gamma protein-coding 626002794 Trnal-uag transfer RNA leucine (anticodon UAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 80959560 80959641 + 116895127 MODEL JAAIVD010000001 trna 626002795 LOC116906932 upstream-binding factor 1-like protein 1 8 14507516 14508703 + 116906932 MODEL JAAIVD010000027;XM_032909857 XP_032765748 protein-coding 626002798 LOC116899733 RNA-binding protein EWS-like 4 4797283 4799531 - 116899733 MODEL JAAIVD010000003 pseudo 626002799 Kiaa0232 KIAA0232 ortholog 11 68437264 68503001 + 116912782 MODEL JAAIVD010000006;XM_032916945;XM_032916946;XM_032916947 XP_032772836;XP_032772837;XP_032772838 uncharacterized protein KIAA0232 homolog protein-coding 626002823 LOC116906917 olfactory receptor 1537-like 8 82301076 82301992 + 116906917 MODEL JAAIVD010000027 pseudo 626002824 Mrpl14 mitochondrial ribosomal protein L14 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 4 84192031 84202355 - 22301074;30032202 116899128 MODEL JAAIVD010000003;XM_032900661 XP_032756552 39S ribosomal protein L14, mitochondrial protein-coding 626002831 LOC116913049 U6 spliceosomal RNA 11 30144426 30144529 + 116913049 MODEL JAAIVD010000006;XR_004389584 snrna 626002834 LOC116895268 small proline-rich protein 2G 3 1643789 1644007 - 22301074 116895268 MODEL JAAIVD010000012;XM_032896587 XP_032752478 protein-coding 626002837 LOC116898197 cytochrome c oxidase subunit 5B, mitochondrial-like 4 137330421 137330807 - 116898197 MODEL JAAIVD010000003 pseudo 626002838 LOC116889817 small integral membrane protein 14-like 30032202 116889817 MODEL JAAIVD010001064;XM_032890660 XP_032746551 protein-coding 626002839 Arid5b AT-rich interaction domain 5B ENCODES a protein that exhibits DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN adipose tissue development (ortholog); adrenal gland development (ortholog); cell development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenoid cystic carcinoma (ortholog); basal cell carcinoma (ortholog) 18 18693581 18738409 + 30032202 116887681 MODEL JAAIVD010000013;XM_032889277;XM_032889279 XP_032745168;XP_032745170 AT-rich interactive domain-containing protein 5B protein-coding 626002852 Vps9d1 VPS9 domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog) 17 42847583 42860594 - 30032202 116886032 MODEL JAAIVD010000011;XM_032887324;XM_032887325 XP_032743215;XP_032743216 VPS9 domain-containing protein 1 protein-coding 626002873 LOC116893138 methionine aminopeptidase 2-like 2 87891683 87893482 + 116893138 MODEL JAAIVD010000001 pseudo 626002874 B3galnt1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH NOR POLYAGGLUTINATION SYNDROME (ortholog) 3 85714858 85740627 + 22301074;30032202 116896789 MODEL JAAIVD010000012;XM_032898259;XM_032898260 XP_032754150;XP_032754151 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 1 protein-coding 626002884 Krt9 keratin 9 INVOLVED IN intermediate filament organization (ortholog); skin development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Diffuse Palmoplantar Keratoderma (ortholog); epidermolytic palmoplantar keratoderma (ortholog); epidermolytic palmoplantar keratoderma 1 (ortholog); FOUND IN keratin filament (ortholog); perinuclear region of cytoplasm (ortholog) 9 54936268 54942410 - 22301074;30032202 116909885 MODEL JAAIVD010000002;XM_032913624 XP_032769515 keratin, type I cytoskeletal 9 protein-coding 626002898 LOC116893742 40S ribosomal protein S11-like 2 21813319 21813815 + 116893742 MODEL JAAIVD010000001 pseudo 626002899 LOC116889475 small nucleolar RNA SNORA4 X 59094940 59095103 + 116889475 MODEL JAAIVD010000014;XR_004386427 snorna 626002902 LOC116898557 putative sperm motility kinase W 4 154809812 154811308 + 116898557 MODEL JAAIVD010000003 pseudo 626002903 Stradb STE20 related adaptor beta ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cell morphogenesis (ortholog); JNK cascade (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 133512008 133532290 - 22301074;30032202 116899420 MODEL JAAIVD010000003;XM_032901159 XP_032757050 STE20-related kinase adapter protein beta protein-coding 626002919 Znf169 zinc finger protein 169 ASSOCIATED WITH obesity (ortholog) 14 67472963 67486281 - 22301074 116883532 MODEL JAAIVD010000009;XM_032884705 XP_032740596 protein-coding 626002925 Fdxr ferredoxin reductase ENCODES a protein that exhibits ferredoxin-NADP+ reductase activity (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); Auditory Neuropathy (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrion (ortholog) 9 68826083 68834622 + 30032202 116909975 MODEL JAAIVD010000002;XM_032913754 XP_032769645 NADPH:adrenodoxin oxidoreductase, mitochondrial protein-coding 626002941 Iglon5 IgLON family member 5 INVOLVED IN motor behavior (ortholog); neuromuscular process controlling balance (ortholog) 2 155987812 156005423 + 30032202 116892233 MODEL JAAIVD010000001;XM_032893804 XP_032749695 protein-coding 626002952 LOC116896856 uncharacterized LOC116896856 3 97120550 97138932 + 116896856 MODEL JAAIVD010000012;XR_004387373 ncrna 626002957 LOC116904983 actin, cytoplasmic 2-like 7 51221817 51222945 - 116904983 MODEL JAAIVD010000026 pseudo 626002958 LOC116889420 U6 spliceosomal RNA X 63817537 63817641 - 116889420 MODEL JAAIVD010000014;XR_004386385 snrna 626002961 LOC116908958 keratin, type I cuticular Ha1 9 54793061 54796407 - 22301074;30032202 116908958 MODEL JAAIVD010000002;XM_032912418 XP_032768309 protein-coding 626002971 LOC116889563 U4 spliceosomal RNA X 53628991 53629120 + 116889563 MODEL JAAIVD010000014 pseudo 626002972 Cd2 CD2 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); heterotypic cell-cell adhesion (ortholog); natural killer cell activation (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); prostate cancer (ortholog); rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cytoplasmic side of plasma membrane (ortholog) 3 56780352 56793452 + 22301074;30032202 116895385 MODEL JAAIVD010000012;XM_032896678 XP_032752569 T-cell surface antigen CD2 protein-coding 626002981 LOC116893305 prostatic steroid-binding protein C1-like 2 151426555 151439520 - 116893305 MODEL JAAIVD010000001;XM_032895131 XP_032751022 protein-coding 626002987 Extl2 exostosin like glycosyltransferase 2 ENCODES a protein that exhibits alpha-1,4-N-acetylgalactosaminyltransferase activity (ortholog); glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN N-acetylglucosamine metabolic process (ortholog); UDP-N-acetylgalactosamine metabolic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 3 43690584 43711480 - 22301074 116896337 MODEL JAAIVD010000012;XM_032897438;XM_032897439;XM_032897440 XP_032753329;XP_032753330;XP_032753331 exostosin-like 2 protein-coding 626003003 Med7 mediator complex subunit 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); regulation of transcription by RNA polymerase II (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nuclear body (ortholog) 9 29139474 29143492 + 22301074 116909867 MODEL JAAIVD010000002;XM_032913595;XM_032913596;XM_032913597;XM_032913598;XM_032913599 XP_032769486;XP_032769487;XP_032769488;XP_032769489;XP_032769490 mediator of RNA polymerase II transcription subunit 7 protein-coding 626003020 Samd9 sterile alpha motif domain containing 9 INVOLVED IN endosomal vesicle fusion (ortholog); ASSOCIATED WITH disease by infectious agent (ortholog); Fetal Growth Retardation (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 6 135227537 135248901 + 22301074;30032202 116904109 MODEL JAAIVD010000024;XM_032906985;XM_032906986;XM_032906987 XP_032762876;XP_032762877;XP_032762878 sterile alpha motif domain-containing protein 9 protein-coding 626003033 LOC116887245 proto-oncogene tyrosine-protein kinase ROS-like 18 28842690 28848396 + 116887245 MODEL JAAIVD010000013;XM_032888811 XP_032744702 protein-coding 626003039 Hapln1 hyaluronan and proteoglycan link protein 1 ASSOCIATED WITH Colorectal Neoplasms (ortholog); Congenital Limb Deformities (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN extracellular matrix (ortholog); synapse (ortholog) 3 206678946 206743358 - 22301074 116897312 MODEL JAAIVD010000012;XM_032899064;XM_032899065;XM_032899066;XM_032899067 XP_032754955;XP_032754956;XP_032754957;XP_032754958 protein-coding 626003056 LOC116904712 small nucleolar RNA SNORA17 6 114455260 114455388 + 116904712 MODEL JAAIVD010000024;XR_004388406 snorna 626003059 LOC116910936 contactin-associated protein like 5-2 10 73079481 73302451 - 22301074 116910936 MODEL JAAIVD010000005;XM_032914680 XP_032770571 protein-coding 626003070 Cenpm centromere protein M ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN inner kinetochore (ortholog) 1 251962247 251972062 - 116914236 MODEL JAAIVD010000025;XM_032918443 XP_032774334 protein-coding 626003080 LOC116914084 uncharacterized LOC116914084 12 65096012 65104606 + 116914084 MODEL JAAIVD010000007;XM_032918390 XP_032774281 uncharacterized protein LOC116914084 protein-coding 626003087 C8b complement C8 beta chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH complement component 6 deficiency (ortholog); genetic disease (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); membrane attack complex (ortholog) 1 49804587 49842056 - 22301074 116887641 MODEL JAAIVD010000025;XM_032889234;XM_032889240 XP_032745125;XP_032745131 complement component C8 beta chain protein-coding 626003104 Arl5b ARF like GTPase 5B INVOLVED IN protein localization to Golgi membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog) 14 8685528 8711184 - 22301074;30032202 116883364 MODEL JAAIVD010000009;XM_032884452 XP_032740343 ADP ribosylation factor like GTPase 5B;ADP-ribosylation factor-like protein 5B protein-coding 626003114 LOC116884011 WW domain-binding protein 11-like 14 69286435 69288321 + 116884011 MODEL JAAIVD010000009 pseudo 626003115 LOC116900392 olfactory receptor 5D13-like 5 69764951 69765901 - 22301074;30032202 116900392 MODEL JAAIVD010000023;XM_032902137 XP_032758028 protein-coding 626003118 Atf7ip activating transcription factor 7 interacting protein ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); transcription coregulator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); Testicular Neoplasms (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 6 12855729 12906773 - 22301074;30032202 116903156 MODEL JAAIVD010000024;XM_032905521;XM_032905522 XP_032761412;XP_032761413 activating transcription factor 7-interacting protein 1 protein-coding 626003140 LOC116894687 cytochrome b-c1 complex subunit 10-like 2 212606393 212606769 - 22301074;30032202 116894687 MODEL JAAIVD010000001;XM_032896388 XP_032752279 protein-coding 626003145 LOC116892582 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 172354245 172359260 - 30032202 116892582 MODEL JAAIVD010000001;XM_032894363 XP_032750254 protein-coding 626003152 LOC116884368 PCNA-associated factor-like 15 43809312 43814312 + 116884368 MODEL JAAIVD010000010 pseudo 626003153 Tmie transmembrane inner ear INVOLVED IN inner ear morphogenesis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 6 (ortholog); genetic disease (ortholog) 8 101446997 101455448 - 116907685 MODEL JAAIVD010000027;XM_032910791 XP_032766682 transmembrane inner ear expressed protein protein-coding 626003161 Ppdpf pancreatic progenitor cell differentiation and proliferation factor INVOLVED IN liver development (ortholog); TOR signaling (ortholog); TORC1 signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN mitochondrion (ortholog) 5 158286120 158287854 + 22301074;30032202 116902431 MODEL JAAIVD010000023;XM_032904966;XM_032904967 XP_032760857;XP_032760858 protein-coding 626003173 Tsg101 tumor susceptibility 101 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell differentiation (ortholog); endosome to lysosome transport (ortholog); exosomal secretion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 2 152457588 152486918 + 22301074;30032202 116892093 MODEL JAAIVD010000001;XM_032893568;XM_032893569;XM_032893570 XP_032749459;XP_032749460;XP_032749461 tumor susceptibility gene 101 protein protein-coding 626003194 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 18755909 18755980 + 116890646 MODEL JAAIVD010000025 trna 626003195 LOC116910484 protein KIAA0100-like 9 92171362 92178516 - 116910484 MODEL JAAIVD010000002;XM_032914367 XP_032770258 protein-coding 626003213 Ezhip EZH inhibitory protein ENCODES a protein that exhibits histone methyltransferase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chromatin organization (ortholog); epigenetic regulation of gene expression (ortholog); oocyte development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 16944590 16948058 + 30032202 116889023 MODEL JAAIVD010000014;XM_032890226 XP_032746117 protein-coding 626003222 Unc13d unc-13 homolog D ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN defense response to virus (ortholog); dense core granule priming (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Familial Hemophagocytic Lymphohistiocytoses (ortholog); familial hemophagocytic lymphohistiocytosis 3 (ortholog); FOUND IN cytosol (ortholog); exocytic vesicle (ortholog); lysosome (ortholog) 9 67982186 67996917 + 116910053 MODEL JAAIVD010000002;XM_032913852;XM_032913854 XP_032769743;XP_032769745 protein unc-13 homolog D protein-coding 626003260 Trim25 tripartite motif containing 25 ENCODES a protein that exhibits RIG-I binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to leukemia inhibitory factor (ortholog); cellular response to oxidative stress (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 81780023 81799256 - 22301074 116910195 MODEL JAAIVD010000002;XM_032914057 XP_032769948 E3 ubiquitin/ISG15 ligase TRIM25 protein-coding 626003273 LOC116890561 small nucleolar RNA SNORA17 1 248078463 248078590 + 116890561 MODEL JAAIVD010000025;XR_004386732 snorna 626003276 LOC116906580 tubulin polymerization-promoting protein family member 2-like 8 897405 899376 + 116906580 MODEL JAAIVD010000027 pseudo 626003277 Ss18l1 SS18L1 subunit of BAF chromatin remodeling complex INVOLVED IN dendrite development (ortholog); positive regulation of dendrite morphogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); cytosol (ortholog); kinetochore (ortholog) 5 157130027 157152486 + 30032202 116902399 MODEL JAAIVD010000023;XM_032904922 XP_032760813 calcium-responsive transactivator protein-coding 626003292 Nipal3 NIPA like domain containing 3 ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); Prostatic Neoplasms (ortholog) 1 22735916 22767045 + 22301074;30032202 116894532 MODEL JAAIVD010000025;XM_032896238 XP_032752129 NIPA-like protein 3 protein-coding 626003307 Hic1 HIC ZBTB transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Gastrointestinal Neoplasms (ortholog); macular degeneration (ortholog); FOUND IN chromatin (ortholog) 9 93887980 93892249 - 22301074;30032202 116910543 MODEL JAAIVD010000002;XM_032914450 XP_032770341 hypermethylated in cancer 1 protein protein-coding 626003312 Sec31b SEC31 homolog B, COPII component FOUND IN vesicle coat (ortholog) 2 44024700 44047784 - 22301074;30032202 116893804 MODEL JAAIVD010000001;XM_032895508 XP_032751399 SEC31 homolog B, COPII coat complex component;protein transport protein Sec31B protein-coding 626003341 LOC116892032 uncharacterized LOC116892032 2 139937759 139941711 + 116892032 MODEL JAAIVD010000001;XR_004386904 ncrna 626003346 LOC116908719 uncharacterized LOC116908719 9 11007811 11018817 + 116908719 MODEL JAAIVD010000002;XR_004389016 ncrna 626003350 LOC116900937 heparan-sulfate 6-O-sulfotransferase 2-like 5 86077274 86157237 + 22301074;30032202 116900937 MODEL JAAIVD010000023;XM_032902583 XP_032758474 protein-coding 626003358 LOC116899819 small nucleolar RNA SNORA4 4 7902423 7902562 + 116899819 MODEL JAAIVD010000003;XR_004387819 snorna 626003361 LOC116910719 small nucleolar RNA SNORA17 9 1319654 1319771 - 116910719 MODEL JAAIVD010000002 pseudo 626003362 Lman1l lectin, mannose binding 1 like ASSOCIATED WITH prostate cancer (ortholog) 8 51496990 51509768 - 30032202 116908078 MODEL JAAIVD010000027;XM_032911354;XM_032911355 XP_032767245;XP_032767246 protein ERGIC-53-like protein-coding 626003381 Actrt1 actin related protein T1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) X 110977095 110978432 - 30032202 116889377 MODEL JAAIVD010000014;XM_032890484 XP_032746375 actin-related protein T1 protein-coding 626003386 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41385843 41385947 + 116884167 MODEL JAAIVD010000009 trna 626003387 LOC116895928 heat shock cognate 71 kDa protein-like 3 124921141 124925844 - 116895928 MODEL JAAIVD010000012 pseudo 626003388 Mto1 mitochondrial tRNA translation optimization 1 ENCODES a protein that exhibits tRNA 5-taurinomethyluridine synthase activity (ortholog); INVOLVED IN mitochondrial tRNA wobble uridine modification (ortholog); tRNA wobble uridine modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 10 (ortholog); Developmental Disabilities (ortholog); FOUND IN mitochondrion (ortholog); transferase complex (ortholog) 8 72633676 72659322 + 22301074;30032202 116907044 MODEL JAAIVD010000027;XM_032909998 XP_032765889 protein MTO1 homolog, mitochondrial protein-coding 626003404 LOC116904500 developmental pluripotency-associated protein 3-like 6 158808954 158814987 - 116904500 MODEL JAAIVD010000024 pseudo 626003405 Ccdc185 coiled-coil domain containing 185 10 61042232 61044238 - 116910842 MODEL JAAIVD010000005;XM_032914592 XP_032770483 coiled-coil domain-containing protein 185 protein-coding 626003410 Nme1 NME/NM23 nucleoside diphosphate kinase 1 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); acetyl-CoA binding (ortholog); ADP binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); apoptotic DNA fragmentation (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; de novo pyrimidine biosynthetic pathway; E-cadherin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); breast carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 51560892 51570219 + 22301074;30032202 116908823 MODEL JAAIVD010000002;XM_032912241;XM_032912243;XM_032912244 XP_032768132;XP_032768134;XP_032768135 nucleoside diphosphate kinase A protein-coding 626003425 Nnmt nicotinamide N-methyltransferase ENCODES a protein that exhibits nicotinamide N-methyltransferase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); methylation (ortholog); NAD+ catabolic process (ortholog); PARTICIPATES IN homocysteine metabolic pathway; methionine cycle/metabolic pathway; niacin metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Arterial Occlusive Diseases (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog) 8 43086468 43098817 - 30032202 116906822 MODEL JAAIVD010000027;XM_032909705 XP_032765596 protein-coding 626003432 LOC116905339 DNA-directed RNA polymerases I, II, and III subunit RPABC1-like 7 109578196 109582078 - 116905339 MODEL JAAIVD010000026 pseudo 626003433 Rell2 RELT like 2 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); positive regulation of p38MAPK cascade (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) 15 6963376 6966955 - 30032202 116884562 MODEL JAAIVD010000010;XM_032885703 XP_032741594 RELT-like protein 2 protein-coding 626003445 Megf11 multiple EGF like domains 11 INVOLVED IN homotypic cell-cell adhesion (ortholog); retina layer formation (ortholog) 8 58694818 59015846 + 22301074;30032202 116907080 MODEL JAAIVD010000027;XM_032910034 XP_032765925 multiple epidermal growth factor-like domains protein 11 protein-coding 626003474 LOC116889171 prohibitin-like X 94134668 94135604 + 116889171 MODEL JAAIVD010000014 pseudo 626003475 LOC116910114 60S ribosomal protein L8-like 9 4317922 4318701 + 116910114 MODEL JAAIVD010000002 pseudo 626003476 Dmp1 dentin matrix acidic phosphoprotein 1 ENCODES a protein that exhibits extracellular matrix binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); regulation of enamel mineralization (ortholog); ASSOCIATED WITH autosomal recessive hypophosphatemic rickets (ortholog); genetic disease (ortholog); Hypophosphatemic Rickets (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); nucleus (ortholog) 11 14266635 14277829 + 22301074;30032202 116912464 MODEL JAAIVD010000006;XM_032916531 XP_032772422 protein-coding 626003485 LOC116885847 uncharacterized LOC116885847 16 2549414 2553464 - 22301074 116885847 MODEL JAAIVD010000004;XM_032887185 XP_032743076 uncharacterized protein LOC116885847 protein-coding 626003489 Dck deoxycytidine kinase ENCODES a protein that exhibits ATP binding (ortholog); cytidine kinase activity (ortholog); deoxyadenosine kinase activity (ortholog); INVOLVED IN dAMP salvage (ortholog); deoxycytidine metabolic process (ortholog); nucleoside phosphate biosynthetic process (ortholog); PARTICIPATES IN gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; lamivudine pharmacokinetics pathway; FOUND IN nucleoplasm (ortholog) 11 2260082 2277496 + 22301074;30032202 116912473 MODEL JAAIVD010000006;XM_032916539 XP_032772430 protein-coding 626003499 LOC116902717 cytochrome c oxidase subunit 6C-2-like 6 52075352 52075583 - 116902717 MODEL JAAIVD010000024 pseudo 626003500 Ccnl2 cyclin L2 INVOLVED IN regulation of RNA splicing (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 4809382 4821381 - 30032202 116891540 MODEL JAAIVD010000025;XM_032892699;XM_032892707;XM_032892717;XM_032892726;XM_032892735 XP_032748590;XP_032748598;XP_032748608;XP_032748617;XP_032748626 cyclin-L2 protein-coding 626003529 Znf787 zinc finger protein 787 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog) 2 179973582 179998887 + 116892724 MODEL JAAIVD010000001;XM_032894594 XP_032750485 protein-coding 626003536 LOC116894146 olfactory receptor 52B2-like 2 104174316 104176246 - 22301074 116894146 MODEL JAAIVD010000001;XM_032895863;XM_032895864 XP_032751754;XP_032751755 protein-coding 626003545 LOC116893294 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like 2 149240500 149256919 - 116893294 MODEL JAAIVD010000001 pseudo 626003546 LOC116894779 developmental pluripotency-associated protein 2-like 2 2095112 2097542 - 30032202 116894779 MODEL JAAIVD010000001;XM_032896432 XP_032752323 protein-coding 626003550 Zwilch zwilch kinetochore protein INVOLVED IN mitotic spindle assembly checkpoint signaling (ortholog); protein localization to kinetochore (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN kinetochore (ortholog); RZZ complex (ortholog) 8 58448714 58478183 - 22301074;30032202 116907461 MODEL JAAIVD010000027;XM_032910447 XP_032766338 protein zwilch homolog protein-coding 626003572 LOC116899762 U6 spliceosomal RNA 4 165299265 165299368 + 116899762 MODEL JAAIVD010000003;XR_004387776 snrna 626003575 Kynu kynureninase ENCODES a protein that exhibits kynureninase activity (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN anthranilate metabolic process (ortholog); L-tryptophan catabolic process (ortholog); L-tryptophan catabolic process to acetyl-CoA (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Catel Manzke syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); hydroxykynureninuria (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 5 21253838 21383448 + 22301074;30032202 116900155 MODEL JAAIVD010000023;XM_032901922 XP_032757813 protein-coding 626003590 Smco3 single-pass membrane protein with coiled-coil domains 3 6 12603967 12611366 + 116904536 MODEL JAAIVD010000024;XM_032907330 XP_032763221 single-pass membrane and coiled-coil domain-containing protein 3 protein-coding 626003596 Eid2 EP300 interacting inhibitor of differentiation 2 ENCODES a protein that exhibits SMAD binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN nucleoplasm (ortholog) 2 167746111 167747475 - 30032202 116892401 MODEL JAAIVD010000001;XM_032894076 XP_032749967 EP300-interacting inhibitor of differentiation 2 protein-coding 626003601 Cbx4 chromobox 4 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 64947708 64954570 + 30032202 116908712 MODEL JAAIVD010000002;XM_032912050 XP_032767941 E3 SUMO-protein ligase CBX4 protein-coding 626003610 Sptlc2 serine palmitoyltransferase long chain base subunit 2 ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ceramide biosynthetic process (ortholog); positive regulation of lipophagy (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) 7 101402226 101480631 - 22301074;30032202 116905323 MODEL JAAIVD010000026;XM_032908216 XP_032764107 serine palmitoyltransferase 2 protein-coding 626003626 LOC116909766 MARCKS-related protein 9 42493580 42494792 + 22301074;30032202 116909766 MODEL JAAIVD010000002;XM_032913454 XP_032769345 protein-coding 626003631 Robo4 roundabout guidance receptor 4 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN establishment of endothelial barrier (ortholog); negative regulation of blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); aortic valve disease 3 (ortholog); autistic disorder (ortholog); FOUND IN external side of plasma membrane (ortholog) 8 33581574 33593609 + 22301074;30032202 116907848 MODEL JAAIVD010000027;XM_032911036 XP_032766927 roundabout homolog 4 protein-coding 626003652 LOC116888021 interferon alpha-1-like 1 65526008 65526678 - 22301074;30032202 116888021 MODEL JAAIVD010000025;XM_032889434 XP_032745325 protein-coding 626003656 LOC116908349 small nucleolar RNA SNORD18 8 58480119 58480186 + 116908349 MODEL JAAIVD010000027;XR_004388900 snorna 626003659 Usf3 upstream transcription factor family member 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH CIC-rearranged sarcoma (ortholog) 4 29064446 29111271 + 22301074 116898861 MODEL JAAIVD010000003;XM_032900227;XM_032900228 XP_032756118;XP_032756119 basic helix-loop-helix domain-containing protein USF3 protein-coding 626003671 Rnf144a ring finger protein 144A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); pattern recognition receptor signaling pathway (ortholog); protein K6-linked ubiquitination (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 7 39825224 39944541 - 22301074;30032202 116904922 MODEL JAAIVD010000026;XM_032907548;XM_032907549;XM_032907551 XP_032763439;XP_032763440;XP_032763442 E3 ubiquitin-protein ligase RNF144A protein-coding 626003690 Fbln1 fibulin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix structural constituent (ortholog); fibrinogen binding (ortholog); INVOLVED IN blood coagulation, fibrin clot formation (ortholog); embryo implantation (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH Autosomal Recessive Syndrome of Syndactyly, Undescended Testes and Central Nervous System Defects (ortholog); endometriosis (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN basement membrane (ortholog); elastic fiber (ortholog); extracellular matrix (ortholog) 1 254570756 254648997 + 22301074 116914626 MODEL JAAIVD010000025;XM_032919004 XP_032774895 fibulin-1 protein-coding 626003711 LOC116895013 small nucleolar RNA SNORA48 2 135561309 135561450 + 116895013 MODEL JAAIVD010000001;XR_004387200 snorna 626003714 Inpp5d inositol polyphosphate-5-phosphatase D ENCODES a protein that exhibits inositol-4,5-bisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol trisphosphate phosphatase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); immunoglobulin mediated immune response (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Liver Cirrhosis (ortholog); Paget's disease of bone (ortholog); FOUND IN actin filament (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) 4 159740868 159845330 + 22301074 116899610 MODEL JAAIVD010000003;XM_032901566 XP_032757457 phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 1 protein-coding 626003745 LOC116886778 small nucleolar RNA U3 17 22823303 22823510 - 116886778 MODEL JAAIVD010000011;XR_004386173 snorna 626003748 LOC116883316 SS18-like protein 2 14 74533374 74534088 + 30032202 116883316 MODEL JAAIVD010000009;XM_032884372 XP_032740263 protein-coding 626003754 Ighmbp2 immunoglobulin mu DNA binding protein 2 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); neuromuscular process (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autosomal dominant distal hereditary motor neuronopathy (ortholog); autosomal dominant distal hereditary motor neuronopathy 1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 4372398 4394823 + 22301074;30032202 116890813 MODEL JAAIVD010000001;XM_032891310 XP_032747201 DNA-binding protein SMUBP-2 protein-coding 626003773 LOC116887040 tubulin alpha-1A chain-like 18 41816060 41817416 - 116887040 MODEL JAAIVD010000013 pseudo 626003774 LOC116902516 U7 small nuclear RNA 5 42636403 42636465 + 116902516 MODEL JAAIVD010000023;XR_004388125 snrna 626003777 Cp ceruloplasmin ENCODES a protein that exhibits copper ion binding (ortholog); ferroxidase activity (ortholog); glutathione peroxidase activity (ortholog); INVOLVED IN CAMKK-AMPK signaling cascade (ortholog); fatty acid oxidation (ortholog); female pregnancy (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); acute kidney failure (ortholog); Albuminuria (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 3 134123631 134182678 - 22301074;30032202 116897003 MODEL JAAIVD010000012;XM_032898608 XP_032754499 protein-coding 626003801 Pgd phosphogluconate dehydrogenase ENCODES a protein that exhibits carbohydrate binding (ortholog); carboxylic acid binding (ortholog); NADP binding (ortholog); INVOLVED IN D-gluconate metabolic process (ortholog); NADP+ metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 1 11611868 11628051 + 22301074;30032202 116892659 MODEL JAAIVD010000025;XM_032894485 XP_032750376 6-phosphogluconate dehydrogenase, decarboxylating protein-coding 626003818 LOC116883963 60S ribosomal protein L22-like 14 22934102 22934423 + 116883963 MODEL JAAIVD010000009 pseudo 626003819 LOC116899759 U6 spliceosomal RNA 4 5761609 5761712 - 116899759 MODEL JAAIVD010000003;XR_004387774 snrna 626003822 LOC116889197 clathrin interactor 1-like X 13660973 13662885 + 30032202 116889197 MODEL JAAIVD010000014;XM_032890355 XP_032746246 protein-coding 626003827 LOC116895028 small nucleolar RNA SNORA17 2 84696463 84696594 + 116895028 MODEL JAAIVD010000001;XR_004387214 snorna 626003830 Grtp1 growth hormone regulated TBC protein 1 13 70493675 70514789 + 116914705 MODEL JAAIVD010000008;XM_032919132;XM_032919133 XP_032775023;XP_032775024 growth hormone-regulated TBC protein 1 protein-coding 626003843 LOC116895729 melanoma antigen preferentially expressed in tumors-like 3 223337441 223340166 + 30032202 116895729 MODEL JAAIVD010000012;XM_032896910 XP_032752801 protein-coding 626003848 Bicra BRD4 interacting chromatin remodeling complex associated protein ENCODES a protein that exhibits transcription regulator activator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Coffin-Siris syndrome 1 (ortholog); Coffin-Siris syndrome 12 (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog); SWI/SNF complex (ortholog) 2 173039857 173113528 - 30032202 116892612 MODEL JAAIVD010000001;XM_032894415 XP_032750306 BRD4-interacting chromatin-remodeling complex-associated protein protein-coding 626003867 Sub1 SUB1 regulator of transcription ENCODES a protein that exhibits DNA helicase activity (ortholog); DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA metabolic process (ortholog); protein homooligomerization (ortholog); regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); transcription regulator complex (ortholog) 3 169084112 169098956 + 22301074;30032202 116897120 MODEL JAAIVD010000012;XM_032898770;XM_032898771 XP_032754661;XP_032754662 activated RNA polymerase II transcriptional coactivator p15 protein-coding 626003879 LOC116906147 dnaJ homolog subfamily C member 17-like 7 94561416 94562006 - 30032202 116906147 MODEL JAAIVD010000026;XM_032909132 XP_032765023 protein-coding 626003882 Il1rl1 interleukin 1 receptor like 1 ENCODES a protein that exhibits interleukin-33 binding (ortholog); interleukin-33 receptor activity (ortholog); INVOLVED IN cellular response to endothelin (ortholog); cellular response to mechanical stimulus (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute myocardial infarction (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); external side of plasma membrane (ortholog) 4 116649008 116697676 + 22301074;30032202 116898151 MODEL JAAIVD010000003;XM_032899528;XM_032899529 XP_032755419;XP_032755420 interleukin-1 receptor-like 1 protein-coding 626003902 LOC116898127 non-histone chromosomal protein HMG-14-like 4 94967074 94967364 + 22301074;30032202 116898127 MODEL JAAIVD010000003;XM_032899501 XP_032755392 protein-coding 626003905 Eif3a eukaryotic translation initiation factor 3 subunit A ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN formation of cytoplasmic translation initiation complex (ortholog); IRES-dependent viral translational initiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) 2 55368302 55392234 + 30032202 116891306 MODEL JAAIVD010000001;XM_032892217 XP_032748108 protein-coding 626003930 C5H11orf91 chromosome 5 C11orf91 homolog 5 81912255 81917260 + 116900518 MODEL JAAIVD010000023;XM_032902248;XR_004387933;XR_004387934 XP_032758139 uncharacterized protein C11orf91 homolog protein-coding 626003941 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92714244 92714315 - 116904849 MODEL JAAIVD010000024 trna 626003942 Scamp4 secretory carrier membrane protein 4 1 154272453 154284481 - 22301074;30032202 116904998 MODEL JAAIVD010000025;XM_032907685;XM_032907692 XP_032763576;XP_032763583 secretory carrier-associated membrane protein 4 protein-coding 626003956 LOC116905128 heterogeneous nuclear ribonucleoprotein R-like 7 83662779 83664224 + 116905128 MODEL JAAIVD010000026 pseudo 626003957 LOC116884816 prohibitin-like 15 28060393 28061225 - 22301074;30032202 116884816 MODEL JAAIVD010000010;XM_032886044 XP_032741935 protein-coding 626003960 LOC116906359 small nucleolar RNA SNORD113/SNORD114 family 7 127255501 127255575 + 116906359 MODEL JAAIVD010000026;XR_004388630 snorna 626003963 LOC116904478 eukaryotic translation initiation factor 3 subunit K-like 6 140899254 140899914 + 116904478 MODEL JAAIVD010000024 pseudo 626003964 LOC116898052 splicing factor YJU2-like 4 84721591 84722521 + 116898052 MODEL JAAIVD010000003 pseudo 626003965 LOC116905886 L-lactate dehydrogenase A chain-like 7 118826356 118827592 + 116905886 MODEL JAAIVD010000026 pseudo 626003966 LOC116884934 uncharacterized LOC116884934 1 271743769 271766378 + 116884934 MODEL JAAIVD010000025;XR_004385908 ncrna 626003970 LOC116900076 von Ebner gland protein 1 5 10372046 10376573 - 30032202 116900076 MODEL JAAIVD010000023;XM_032901862 XP_032757753 protein-coding 626003981 Myt1 myelin transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN diaphragm development (ortholog); endocrine pancreas development (ortholog); intracellular glucose homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 28398 72143 + 22301074;30032202 116890592 MODEL JAAIVD010000025;XM_032891014;XM_032891015;XM_032891016;XM_032891017;XM_032891018 XP_032746905;XP_032746906;XP_032746907;XP_032746908;XP_032746909 protein-coding 626004015 LOC116903114 uncharacterized LOC116903114 6 6588337 6588839 + 116903114 MODEL JAAIVD010000024;XR_004388251 ncrna 626004019 Lnx1 ligand of numb-protein X 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN synapse maturation (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); postsynapse (ortholog) 11 31367809 31469935 - 22301074;30032202 116912073 MODEL JAAIVD010000006;XM_032915937;XM_032915939;XM_032915940;XM_032915941 XP_032771828;XP_032771830;XP_032771831;XP_032771832 E3 ubiquitin-protein ligase LNX protein-coding 626004042 Tnks2 tankyrase 2 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN multicellular organism growth (ortholog); negative regulation of telomere maintenance via telomere lengthening (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nucleus (ortholog) 2 36927013 36979728 - 22301074 116891137 MODEL JAAIVD010000001;XM_032891872;XM_032891873;XM_032891874 XP_032747763;XP_032747764;XP_032747765 poly [ADP-ribose] polymerase tankyrase-2 protein-coding 626004077 Gk5 glycerol kinase 5 ENCODES a protein that exhibits glycerol kinase activity (ortholog); INVOLVED IN glycerol-3-phosphate biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 8 87554351 87614680 + 30032202 116907319 MODEL JAAIVD010000027;XM_032910264 XP_032766155 putative glycerol kinase 5 protein-coding 626004097 LOC116900601 uncharacterized LOC116900601 5 99232808 99234584 - 116900601 MODEL JAAIVD010000023;XR_004387937 ncrna 626004102 LOC116905708 uncharacterized LOC116905708 7 56747192 56769051 - 116905708 MODEL JAAIVD010000026;XR_004388563 ncrna 626004107 LOC116899862 small nucleolar RNA SNORA17 4 65880712 65880843 + 116899862 MODEL JAAIVD010000003;XR_004387856 snorna 626004110 Ttc17 tetratricopeptide repeat domain 17 INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 68468684 68573802 - 22301074;30032202 116901660 MODEL JAAIVD010000023;XM_032903771;XM_032903772;XM_032903773;XM_032903774 XP_032759662;XP_032759663;XP_032759664;XP_032759665 tetratricopeptide repeat protein 17 protein-coding 626004148 Alkal1 ALK and LTK ligand 1 ENCODES a protein that exhibits cytokine activity (ortholog); receptor signaling protein tyrosine kinase activator activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of ERK5 cascade (ortholog); FOUND IN extracellular space (ortholog) 1 141543012 141571439 + 22301074;30032202 116889596 MODEL JAAIVD010000025;XM_032890533 XP_032746424 protein-coding 626004156 Plg plasminogen ENCODES a protein that exhibits apolipoprotein binding (ortholog); endopeptidase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood coagulation (ortholog); extracellular matrix disassembly (ortholog); fibrinolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acute kidney failure (ortholog); atypical hemolytic-uremic syndrome (ortholog); C1 inhibitor deficiency (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 2 191118945 191160012 + 22301074;30032202 116893514 MODEL JAAIVD010000001;XM_032895247 XP_032751138 protein-coding 626004178 LOC116884071 small nucleolar RNA SNORA17 14 67557654 67557785 - 116884071 MODEL JAAIVD010000009;XR_004385819 snorna 626004181 LOC116890549 small nucleolar RNA SNORA17 1 161854244 161854367 + 116890549 MODEL JAAIVD010000025 pseudo 626004182 LOC116906099 proliferating cell nuclear antigen-like 7 73539828 73541466 - 116906099 MODEL JAAIVD010000026 pseudo 626004183 Spty2d1 SPT2 chromatin protein domain containing 1 ENCODES a protein that exhibits DNA binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN heterochromatin formation (ortholog); nucleosome assembly (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 152365378 152383335 + 30032202 116892090 MODEL JAAIVD010000001;XM_032893565 XP_032749456 protein SPT2 homolog protein-coding 626004193 Rfc2 replication factor C subunit 2 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog) 16 19462495 19475493 - 22301074;30032202 116885713 MODEL JAAIVD010000004;XM_032887021 XP_032742912 protein-coding 626004208 LOC116904761 small nucleolar RNA SNORA17 6 37788005 37788129 + 116904761 MODEL JAAIVD010000024 pseudo 626004209 Slc14a2 solute carrier family 14 member 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); urea transmembrane transporter activity (ortholog); INVOLVED IN urea transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 15 53578776 54003881 + 22301074;30032202 116884465 MODEL JAAIVD010000010;XM_032885572;XM_032885573 XP_032741463;XP_032741464 urea transporter 2 protein-coding 626004238 Troap trophinin associated protein ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog) 1 271903613 271911194 + 116884960 MODEL JAAIVD010000025;XM_032886168 XP_032742059 tastin protein-coding 626004256 LOC116894395 keratin-associated protein 20-2-like 2 157162104 157162277 + 116894395 MODEL JAAIVD010000001;XM_032896103 XP_032751994 protein-coding 626004259 LOC116914947 ral guanine nucleotide dissociation stimulator-like 13 11601727 11608637 - 116914947 MODEL JAAIVD010000008;XM_032919368 XP_032775259 protein-coding 626004266 Ralgapb Ral GTPase activating protein non-catalytic subunit beta ENCODES a protein that exhibits GTPase activator activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); Ral protein signal transduction (ortholog); regulation of exocyst localization (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); High Myopia (ortholog); intellectual disability (ortholog) 5 137754500 137844238 + 22301074;30032202 116902237 MODEL JAAIVD010000023;XM_032904646;XM_032904647;XM_032904648;XM_032904649;XM_032904650;XM_032904651;XM_032904652;XM_032904653;XM_032904654 XP_032760537;XP_032760538;XP_032760539;XP_032760540;XP_032760541;XP_032760542;XP_032760543;XP_032760544;XP_032760545 ral GTPase-activating protein subunit beta protein-coding 626004315 LOC116906491 small nucleolar RNA U13 7 99180217 99180311 + 116906491 MODEL JAAIVD010000026 pseudo 626004316 LOC116907858 olfactory receptor 10G7 8 82801573 82802508 + 22301074 116907858 MODEL JAAIVD010000027;XM_032911047 XP_032766938 protein-coding 626004319 LOC116886940 40S ribosomal protein S23-like 1 30603716 30604147 - 22301074;30032202 116886940 MODEL JAAIVD010000025;XM_032888439 XP_032744330 protein-coding 626004322 LOC116893413 homeotic protein empty spiracles-like 2 173897153 173898747 - 22301074;30032202 116893413 MODEL JAAIVD010000001;XM_032895195 XP_032751086 protein-coding 626004327 LOC116884660 zinc finger protein 271 15 19839765 19842101 - 30032202 116884660 MODEL JAAIVD010000010;XM_032885822 XP_032741713 protein-coding 626004332 LOC116908058 60S ribosomal protein L17-like 8 37838080 37838640 - 116908058 MODEL JAAIVD010000027 pseudo 626004333 LOC116904340 60S ribosomal protein L27a-like 6 69944279 69954855 - 116904340 MODEL JAAIVD010000024 pseudo 626004334 Osbpl5 oxysterol binding protein like 5 ENCODES a protein that exhibits cholesterol binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN phospholipid transport (ortholog); FOUND IN endoplasmic reticulum-plasma membrane contact site (ortholog) 2 6005060 6031255 + 30032202 116890829 MODEL JAAIVD010000001;XM_032891346 XP_032747237 oxysterol-binding protein-related protein 5 protein-coding 626004359 Foxj1 forkhead box J1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); axoneme assembly (ortholog); brain development (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); genetic disease (ortholog); Kartagener syndrome (ortholog); FOUND IN nucleus (ortholog) 9 67734625 67739331 + 22301074;30032202 116908628 MODEL JAAIVD010000002;XM_032911880 XP_032767771 forkhead box protein J1 protein-coding 626004366 LOC116911870 U5 spliceosomal RNA 10 50661177 50661292 - 116911870 MODEL JAAIVD010000005;XR_004389384 snrna 626004369 LOC116897752 cellular nucleic acid-binding protein-like 4 2150891 2151501 - 116897752 MODEL JAAIVD010000003 pseudo 626004370 LOC116888502 dnaJ homolog subfamily B member 1-like X 66161912 66163071 + 116888502 MODEL JAAIVD010000014;XR_004386317 pseudo 626004373 LOC116890558 small nucleolar RNA SNORA17 1 65068581 65068704 + 116890558 MODEL JAAIVD010000025 pseudo 626004374 Znf638 zinc finger protein 638 FOUND IN nucleoplasm (ortholog) 6 62250463 62325832 - 22301074;30032202 116903592 MODEL JAAIVD010000024;XM_032906229;XM_032906230;XM_032906231;XM_032906232;XM_032906233;XM_032906234;XM_032906235 XP_032762120;XP_032762121;XP_032762122;XP_032762123;XP_032762124;XP_032762125;XP_032762126 protein-coding 626004415 LOC116911733 putative monooxygenase p33MONOX 10 29657102 29657867 - 116911733 MODEL JAAIVD010000005 pseudo 626004416 Mzt2b mitotic spindle organizing protein 2B FOUND IN centrosome (ortholog); cytosol (ortholog); gamma-tubulin ring complex (ortholog) 4 1199153 1206332 - 30032202 116898608 MODEL JAAIVD010000003;XM_032899803;XM_032899804;XM_032899805;XM_032899806 XP_032755694;XP_032755695;XP_032755696;XP_032755697 mitotic-spindle organizing protein 2B protein-coding 626004433 Prss23 serine protease 23 ASSOCIATED WITH COVID-19 (ortholog); exudative vitreoretinopathy 1 (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog) 2 111627667 111636164 + 22301074;30032202 116891861 MODEL JAAIVD010000001;XM_032893260 XP_032749151 protein-coding 626004439 Haus3 HAUS augmin like complex subunit 3 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 11 77015709 77050084 - 22301074;30032202 116912846 MODEL JAAIVD010000006;XM_032917052;XM_032917053;XM_032917054;XR_004389483 XP_032772943;XP_032772944;XP_032772945 HAUS augmin-like complex subunit 3 protein-coding 626004460 Slc25a34 solute carrier family 25 member 34 INVOLVED IN blastocyst hatching (ortholog) 1 16524373 16529462 + 116893293 MODEL JAAIVD010000025;XM_032895126 XP_032751017 protein-coding 626004469 Decr1 2,4-dienoyl-CoA reductase 1 ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); identical protein binding (ortholog); NADPH binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); lipid metabolism disorder (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) 1 127844877 127872513 + 30032202 116903170 MODEL JAAIVD010000025;XM_032905543 XP_032761434 2,4-dienoyl-CoA reductase, mitochondrial protein-coding 626004483 LOC116888031 prolactin-3D1-like X 84061133 84067443 + 22301074;30032202 116888031 MODEL JAAIVD010000014;XM_032889438 XP_032745329 protein-coding 626004491 LOC116908659 protein FAM220A-like 9 18044183 18044922 + 116908659 MODEL JAAIVD010000002 pseudo 626004492 LOC116910935 40S ribosomal protein S19-like 10 70176376 70190998 + 116910935 MODEL JAAIVD010000005 pseudo 626004493 LOC116904680 small nucleolar RNA SNORA5 6 62253969 62254097 - 116904680 MODEL JAAIVD010000024;XR_004388378 snorna 626004496 Clint1 clathrin interactor 1 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); FOUND IN clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 9 28584434 28638499 + 30032202 116908502 MODEL JAAIVD010000002;XM_032911672 XP_032767563 protein-coding 626004512 Ube2b ubiquitin conjugating enzyme E2 B ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); chiasma assembly (ortholog); chromatin organization (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); HULC complex (ortholog) 9 34575445 34590470 - 30032202 116908508 MODEL JAAIVD010000002;XM_032911682 XP_032767573 ubiquitin-conjugating enzyme E2 B protein-coding 626004523 Foxa1 forkhead box A1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); brain glioma (ortholog); breast cancer (ortholog); FOUND IN fibrillar center (ortholog); microvillus (ortholog); nucleoplasm (ortholog) 7 70936277 70942423 - 22301074;30032202 116905071 MODEL JAAIVD010000026;XM_032907777;XM_032907778;XM_032907779 XP_032763668;XP_032763669;XP_032763670 hepatocyte nuclear factor 3-alpha protein-coding 626004536 LOC116904652 U6 spliceosomal RNA 6 35432580 35432675 + 116904652 MODEL JAAIVD010000024 pseudo 626004537 LOC116901030 cell division cycle-associated 7-like protein 5 129755258 129756542 - 116901030 MODEL JAAIVD010000023 pseudo 626004538 LOC116906070 glyceraldehyde-3-phosphate dehydrogenase-like 7 59001334 59002936 + 116906070 MODEL JAAIVD010000026 pseudo 626004539 Tmtc4 transmembrane O-mannosyltransferase targeting cadherins 4 ENCODES a protein that exhibits ATPase binding (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); outer hair cell apoptotic process (ortholog); positive regulation of endoplasmic reticulum calcium ion concentration (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 122 (ortholog); Worster-Drought Syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 1918364 1974522 + 22301074;30032202 116913401 MODEL JAAIVD010000007;XM_032917583;XM_032917584 XP_032773474;XP_032773475 protein O-mannosyl-transferase TMTC4 protein-coding 626004564 Tmprss11f transmembrane serine protease 11F INVOLVED IN establishment of skin barrier (ortholog); FOUND IN cell surface (ortholog) 11 355750 389380 + 22301074 116912628 MODEL JAAIVD010000006;XM_032916746 XP_032772637 transmembrane protease serine 11F protein-coding 626004576 Vstm5 V-set and transmembrane domain containing 5 INVOLVED IN filopodium assembly (ortholog); positive regulation of excitatory synapse assembly (ortholog); protein homooligomerization (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); membrane (ortholog) 8 11036482 11056407 + 30032202 116906683 MODEL JAAIVD010000027;XM_032909475 XP_032765366 V-set and transmembrane domain-containing protein 5 protein-coding 626004584 Msx1 msh homeobox 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of meiosis (ortholog); anterior/posterior pattern specification (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH anodontia (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN nuclear periphery (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 67352539 67356449 + 22301074;30032202 116912287 MODEL JAAIVD010000006;XM_032916287 XP_032772178 homeobox protein MSX-1 protein-coding 626004590 Noxa1 NADPH oxidase activator 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN regulation of hydrogen peroxide metabolic process (ortholog); regulation of respiratory burst (ortholog); superoxide metabolic process (ortholog); FOUND IN NADPH oxidase complex (ortholog) 5 12089544 12099895 + 22301074;30032202 116901323 MODEL JAAIVD010000023;XM_032903138 XP_032759029 protein-coding 626004606 Csad cysteine sulfinic acid decarboxylase ENCODES a protein that exhibits sulfinoalanine decarboxylase activity (ortholog); INVOLVED IN L-cysteine catabolic process to hypotaurine (ortholog); L-cysteine catabolic process to taurine (ortholog); taurine biosynthetic process (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; transsulfuration pathway of homocysteine metabolism; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) 1 260884362 260896588 + 22301074;30032202 116883593 MODEL JAAIVD010000025;XM_032884777 XP_032740668 protein-coding 626004625 Kplce KPRP N-terminal and LCE C-terminal like protein 3 120233804 120235757 - 116895526 MODEL JAAIVD010000012;XM_032896771 XP_032752662 C3H1orf68 chromosome 3 C1orf68 homolog;skin-specific protein 32 protein-coding 626004631 Cxcl13 C-X-C motif chemokine ligand 13 ENCODES a protein that exhibits CCR10 chemokine receptor binding (ortholog); chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); B cell chemotaxis (ortholog); B cell chemotaxis across high endothelial venule (ortholog); ASSOCIATED WITH endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); malignant mesothelioma (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 11 8264509 8269554 - 22301074;30032202 116912437 MODEL JAAIVD010000006;XM_032916506;XM_032916507 XP_032772397;XP_032772398 C-X-C motif chemokine 13 protein-coding 626004644 LOC116887054 uncharacterized LOC116887054 18 43697816 43702598 + 116887054 MODEL JAAIVD010000013;XR_004386198 ncrna 626004649 LOC116889091 coronin-1B-like X 35327726 35329574 + 30032202 116889091 MODEL JAAIVD010000014;XM_032890263 XP_032746154 protein-coding 626004654 LOC116905792 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial-like 7 93232470 93234037 + 116905792 MODEL JAAIVD010000026 pseudo 626004655 Meox1 mesenchyme homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); sclerotome development (ortholog); somite development (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 61163977 61182432 - 22301074;30032202 116910585 MODEL JAAIVD010000002;XM_032914507 XP_032770398 homeobox protein MOX-1 protein-coding 626004661 Rpl13a ribosomal protein L13a ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); cellular response to type II interferon (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 2 154415381 154418482 + 22301074;30032202 116892168 MODEL JAAIVD010000001;XM_032893672 XP_032749563 60S ribosomal protein L13a protein-coding 626004673 LOC116905676 uncharacterized LOC116905676 7 48784799 48802736 - 116905676 MODEL JAAIVD010000026;XR_004388559;XR_004388560 ncrna 626004681 Parvg parvin gamma PARTICIPATES IN integrin mediated signaling pathway 1 253717115 253733361 + 22301074;30032202 116914538 MODEL JAAIVD010000025;XM_032918873 XP_032774764 gamma-parvin protein-coding 626004697 Zmat1 zinc finger matrin-type 1 X 87820575 87852001 - 22301074 116888523 MODEL JAAIVD010000014;XM_032889821 XP_032745712 zinc finger matrin-type protein 1 protein-coding 626004709 LOC116889495 small nucleolar RNA SNORA48 X 101490849 101490991 - 116889495 MODEL JAAIVD010000014;XR_004386444 snorna 626004712 Rnf103 ring finger protein 103 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH depressive disorder (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 74516104 74533216 + 30032202 116903685 MODEL JAAIVD010000024;XM_032906348;XM_032906349 XP_032762239;XP_032762240 E3 ubiquitin-protein ligase RNF103 protein-coding 626004722 Fgf16 fibroblast growth factor 16 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of brown fat cell proliferation (ortholog); positive regulation of endothelial cell chemotaxis to fibroblast growth factor (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); syndactyly type 8 (ortholog) X 65309913 65320337 + 22301074;30032202 116888769 MODEL JAAIVD010000014;XM_032890058 XP_032745949 protein-coding 626004729 LOC116890120 geranylgeranyl transferase type-2 subunit alpha-like 1 240640284 240641973 + 116890120 MODEL JAAIVD010000025 pseudo 626004730 LOC116884804 60S ribosomal protein L36-like 15 2471396 2471709 - 116884804 MODEL JAAIVD010000010 pseudo 626004731 LOC116895754 60S ribosomal protein L24-like 3 39223847 39226853 + 116895754 MODEL JAAIVD010000012 pseudo 626004732 Hook2 hook microtubule tethering protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome organization (ortholog); endosome to lysosome transport (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); FHF complex (ortholog) 17 15287453 15299655 - 22301074;30032202 116886358 MODEL JAAIVD010000011;XM_032887815;XM_032887816;XM_032887817;XM_032887818;XM_032887819 XP_032743706;XP_032743707;XP_032743708;XP_032743709;XP_032743710 protein Hook homolog 2 protein-coding 626004767 Nefm neurofilament medium chain ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor binding (ortholog); toxic substance binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); axon regeneration (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); congenital hypothyroidism (ortholog); FOUND IN axon (ortholog); cytoskeleton (ortholog); intermediate filament (ortholog) 12 56346240 56351581 + 22301074;30032202 116913139 MODEL JAAIVD010000007;XM_032917342 XP_032773233 neurofilament medium polypeptide protein-coding 626004774 Dach2 dachshund family transcription factor 2 INVOLVED IN development of primary female sexual characteristics (ortholog) X 69404602 69891944 + 116888940 MODEL JAAIVD010000014;XM_032890177 XP_032746068 dachshund homolog 2 protein-coding 626004790 Pebp4 phosphatidylethanolamine binding protein 4 12 54287483 54492144 - 116913172 MODEL JAAIVD010000007;XM_032917374 XP_032773265 phosphatidylethanolamine-binding protein 4 protein-coding 626004799 Dph3 diphthamide biosynthesis 3 INVOLVED IN negative regulation of protein secretion (ortholog); protein histidyl modification to diphthamide (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 7781405 7784609 - 30032202 116914566 MODEL JAAIVD010000008;XM_032918920;XM_032918922 XP_032774811;XP_032774813 DPH3 homolog protein-coding 626004809 LOC116895300 alcohol dehydrogenase 1-like 3 20838233 20854396 - 22301074;30032202 116895300 MODEL JAAIVD010000012;XM_032896612 XP_032752503 protein-coding 626004821 Rtn4r reticulon 4 receptor ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); ganglioside GM1 binding (ortholog); ganglioside GT1b binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell surface receptor signaling pathway (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN axonal growth cone (ortholog); cell surface (ortholog); dendritic shaft (ortholog) 4 3388563 3413417 + 22301074;30032202 116898662 MODEL JAAIVD010000003;XM_032899897 XP_032755788 reticulon-4 receptor protein-coding 626004827 Ttc24 tetratricopeptide repeat domain 24 3 65495786 65501393 + 22301074 116895803 MODEL JAAIVD010000012;XM_032896943 XP_032752834 tetratricopeptide repeat protein 24 protein-coding 626004839 LOC116885765 uncharacterized LOC116885765 16 12163002 12164980 - 116885765 MODEL JAAIVD010000004;XR_004386042 ncrna 626004843 Wdr74 WD repeat domain 74 INVOLVED IN blastocyst formation (ortholog); ribosomal large subunit biogenesis (ortholog); RNA metabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); disease of cellular proliferation (ortholog); melanoma (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 9203613 9208299 - 22301074;30032202 116890932 MODEL JAAIVD010000001;XM_032891576;XM_032891577 XP_032747467;XP_032747468 WD repeat-containing protein 74 protein-coding 626004862 LOC116886677 olfactory receptor 7C1-like 17 14720965 14721903 + 22301074;30032202 116886677 MODEL JAAIVD010000011;XM_032888168 XP_032744059 protein-coding 626004865 Nsmaf neutral sphingomyelinase activation associated factor ENCODES a protein that exhibits sphingomyelin phosphodiesterase activator activity (ortholog); INVOLVED IN positive regulation of amide metabolic process (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of lipid metabolic process (ortholog); PARTICIPATES IN ceramide signaling pathway; tumor necrosis factor mediated signaling pathway 1 136530936 136590438 + 22301074 116903615 MODEL JAAIVD010000025;XM_032906262 XP_032762153 protein FAN protein-coding 626004900 LOC116884359 ral guanine nucleotide dissociation stimulator-like 15 39238021 39239695 + 116884359 MODEL JAAIVD010000010;XM_032885486 XP_032741377 protein-coding 626004905 LOC116887418 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8479162 8481441 - 116887418 MODEL JAAIVD010000013;XR_004386212 pseudo 626004911 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42416176 42416248 - 116884177 MODEL JAAIVD010000009 trna 626004912 LOC116902807 60S ribosomal protein L17-like 6 83761376 83762069 + 22301074;30032202 116902807 MODEL JAAIVD010000024;XM_032905140 XP_032761031 protein-coding 626004916 LOC116894775 periodic tryptophan protein 1 homolog 1 74452475 74508195 + 116894775 MODEL JAAIVD010000025 pseudo 626004917 Asf1a anti-silencing function 1A histone chaperone ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN DNA repair (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 30559382 30572335 + 22301074;30032202 116886840 MODEL JAAIVD010000013;XM_032888288 XP_032744179 histone chaperone ASF1A protein-coding 626004925 Frmpd2 FERM and PDZ domain containing 2 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); FOUND IN basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 13 9246128 9325317 + 22301074 116914935 MODEL JAAIVD010000008;XM_032919361 XP_032775252 FERM and PDZ domain-containing protein 2 protein-coding 626004956 LOC116899711 uncharacterized LOC116899711 4 180321879 180323999 + 116899711 MODEL JAAIVD010000003;XR_004387750 ncrna 626004960 Gabre gamma-aminobutyric acid type A receptor subunit epsilon ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of chloride transport (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog) X 130018171 130035689 + 22301074;30032202 116888624 MODEL JAAIVD010000014;XM_032889922 XP_032745813 gamma-aminobutyric acid receptor subunit epsilon protein-coding 626004973 Nudt6 nudix hydrolase 6 ENCODES a protein that exhibits FAD diphosphatase activity (ortholog); NADH pyrophosphatase activity (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 3 116613441 116628996 + 30032202 116896919 MODEL JAAIVD010000012;XM_032898484;XM_032898485 XP_032754375;XP_032754376 nucleoside diphosphate-linked moiety X motif 6 protein-coding 626004986 Cfap100 cilia and flagella associated protein 100 FOUND IN ciliary basal body (ortholog) 6 56484322 56508486 + 30032202 116903511 MODEL JAAIVD010000024;XM_032906116 XP_032762007 cilia- and flagella-associated protein 100 protein-coding 626005007 Ggct gamma-glutamylcyclotransferase ENCODES a protein that exhibits gamma-glutamylcyclotransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN release of cytochrome c from mitochondria (ortholog); PARTICIPATES IN glutathione metabolic pathway; glutathione synthase deficiency pathway; glutathionuria disease pathway; FOUND IN cytosol (ortholog) 6 86079019 86085324 + 30032202 116903761 MODEL JAAIVD010000024;XM_032906450;XM_032906451 XP_032762341;XP_032762342 protein-coding 626005017 LOC116890545 small nucleolar RNA SNORA17 1 66092855 66092979 - 116890545 MODEL JAAIVD010000025 pseudo 626005018 LOC116898134 60S ribosomal protein L21-like 4 112035808 112036248 - 116898134 MODEL JAAIVD010000003 pseudo 626005019 LOC116887756 U6 spliceosomal RNA 18 37589787 37589893 + 116887756 MODEL JAAIVD010000013;XR_004386256 snrna 626005022 LOC116892410 zinc finger protein 59-like 2 168051078 168065901 + 22301074 116892410 MODEL JAAIVD010000001;XM_032894090 XP_032749981 protein-coding 626005031 Tmem255a transmembrane protein 255A INVOLVED IN response to bacterium (ortholog) X 101528934 101587478 - 116888432 MODEL JAAIVD010000014;XM_032889708 XP_032745599 protein-coding 626005045 Poln DNA polymerase nu ENCODES a protein that exhibits cyclin binding (ortholog); DNA-directed DNA polymerase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 70754704 70868742 + 22301074;30032202 116912356 MODEL JAAIVD010000006;XM_032916412 XP_032772303 protein-coding 626005071 Sfmbt1 Scm like with four mbt domains 1 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle organ development (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 6438075 6519399 + 22301074 116915040 MODEL JAAIVD010000008;XM_032919444 XP_032775335 scm-like with four MBT domains protein 1 protein-coding 626005096 Psmd9 proteasome 26S subunit, non-ATPase 9 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN negative regulation of insulin secretion (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of insulin secretion (ortholog); FOUND IN nucleus (ortholog); proteasome regulatory particle, base subcomplex (ortholog) 16 30597143 30616417 - 22301074;30032202 116885526 MODEL JAAIVD010000004;XM_032886823;XR_004386013;XR_004386014 XP_032742714 26S proteasome non-ATPase regulatory subunit 9 protein-coding 626005113 Xylt1 xylosyltransferase 1 ENCODES a protein that exhibits protein xylosyltransferase activity (ortholog); INVOLVED IN cellular response to heat (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH Desbuquois dysplasia (ortholog); Desbuquois Dysplasia 1 (ortholog); Desbuquois Dysplasia 2 (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); Golgi cis cisterna (ortholog) 2 83978598 84264793 - 22301074;30032202 116891618 MODEL JAAIVD010000001;XM_032892825 XP_032748716 protein-coding 626005129 LOC116907376 olfactory receptor 18-like 8 16505479 16506381 - 22301074;30032202 116907376 MODEL JAAIVD010000027;XM_032910329 XP_032766220 protein-coding 626005133 LOC116893397 zinc finger protein 239-like 2 170450261 170461471 + 116893397 MODEL JAAIVD010000001 pseudo 626005134 Mapre3 microtubule associated protein RP/EB family member 3 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); positive regulation of dendritic spine morphogenesis (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); Spontaneous Abortions (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); microtubule (ortholog) 7 23219321 23263292 - 30032202 116906000 MODEL JAAIVD010000026;XM_032909038;XM_032909039 XP_032764929;XP_032764930 microtubule-associated protein RP/EB family member 3 protein-coding 626005149 LOC116890145 lymphocyte antigen 6B-like 1 247832054 247835207 - 30032202 116890145 MODEL JAAIVD010000025;XM_032890879 XP_032746770 protein-coding 626005156 LOC116905877 serine protease inhibitor A3B-like 7 115182217 115197408 + 30032202 116905877 MODEL JAAIVD010000026;XM_032908866 XP_032764757 protein-coding 626005162 LOC116890435 U7 small nuclear RNA 1 199586601 199586664 + 116890435 MODEL JAAIVD010000025;XR_004386632 snrna 626005165 Sema4a semaphorin 4A INVOLVED IN axonogenesis (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of excitatory synapse assembly (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Colonic Polyps (ortholog); colorectal cancer (ortholog) 3 65104552 65125837 + 30032202 116896686 MODEL JAAIVD010000012;XM_032898070;XM_032898071;XM_032898072;XM_032898073 XP_032753961;XP_032753962;XP_032753963;XP_032753964 semaphorin-4A protein-coding 626005194 Itih1 inter-alpha-trypsin inhibitor heavy chain 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Liver Neoplasms (ortholog); Osteoarthritis, Hip (ortholog); FOUND IN extracellular matrix (ortholog) 13 6632413 6646363 - 22301074 116914435 MODEL JAAIVD010000008;XM_032918733 XP_032774624 inter-alpha-trypsin inhibitor heavy chain H1 protein-coding 626005218 LOC116895784 bile acid receptor-like 3 55079206 55096919 + 22301074;30032202 116895784 MODEL JAAIVD010000012;XM_032896931 XP_032752822 protein-coding 626005230 LOC116883527 uncharacterized LOC116883527 14 41884223 41885014 - 116883527 MODEL JAAIVD010000009;XR_004385768 ncrna 626005234 Anks6 ankyrin repeat and sterile alpha motif domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Cardiovascular Abnormalities (ortholog); cystic kidney disease (ortholog); FOUND IN ciliary inversin compartment (ortholog) 1 100104692 100150889 - 22301074;30032202 116901962 MODEL JAAIVD010000025;XM_032904203 XP_032760094 ankyrin repeat and SAM domain-containing protein 6 protein-coding 626005254 LOC116904767 small nucleolar RNA SNORA17 6 3223404 3223541 + 116904767 MODEL JAAIVD010000024;XR_004388439 snorna 626005257 LOC116897605 small nucleolar RNA SNORA17 3 178678109 178678231 - 116897605 MODEL JAAIVD010000012 pseudo 626005258 Bag2 BAG cochaperone 2 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Carpenter syndrome 1 (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic microtubule (ortholog) 4 109997014 110007235 - 22301074;30032202 116899267 MODEL JAAIVD010000003;XM_032900888 XP_032756779 BAG family molecular chaperone regulator 2 protein-coding 626005265 LOC116895181 tubulin alpha chain-like 3 152304261 152307290 + 116895181 MODEL JAAIVD010000012 pseudo 626005266 LOC116908353 small nucleolar RNA SNORA70 8 99756973 99757091 - 116908353 MODEL JAAIVD010000027 pseudo 626005267 Cfap54 cilia and flagella associated protein 54 INVOLVED IN cerebrospinal fluid circulation (ortholog); cilium assembly (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH Primary Ciliary Dyskinesia 54 (ortholog); Spermatogenic Failure 98 (ortholog) 1 171864768 172141244 - 30032202 116908174 MODEL JAAIVD010000025;XM_032911469 XP_032767360 cilia- and flagella-associated protein 54 protein-coding 626005339 Pla2g2c phospholipase A2 group IIC ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog) 1 19463393 19484156 - 22301074;30032202 116893825 MODEL JAAIVD010000025;XM_032895544 XP_032751435 putative inactive group IIC secretory phospholipase A2 protein-coding 626005350 LOC116889166 cytochrome P450 4A14 1 123581767 123589865 - 22301074;30032202 116889166 MODEL JAAIVD010000025;XM_032890336;XM_032890340 XP_032746227;XP_032746231 protein-coding 626005366 Itpr2 inositol 1,4,5-trisphosphate receptor type 2 ENCODES a protein that exhibits calcium ion binding (ortholog); inositol 1,4,5 trisphosphate binding (ortholog); inositol 1,4,5-trisphosphate-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to cAMP (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Brain Hypoxia (ortholog); Cardiomegaly (ortholog); FOUND IN axon (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 6 3787011 4174811 - 22301074 116903086 MODEL JAAIVD010000024;XM_032905407 XP_032761298 protein-coding 626005427 LOC116893353 keratin-associated protein 13-1-like 2 158506495 158507140 + 116893353 MODEL JAAIVD010000001 pseudo 626005428 Btrc beta-transducin repeat containing E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-catenin binding (ortholog); protein phosphorylated amino acid binding (ortholog); ubiquitin ligase activator activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN Hedgehog signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 2 44844243 45009312 + 22301074 116891225 MODEL JAAIVD010000001;XM_032892065;XM_032892066;XM_032892067;XM_032892068;XM_032892069;XM_032892070 XP_032747956;XP_032747957;XP_032747958;XP_032747959;XP_032747960;XP_032747961 F-box/WD repeat-containing protein 1A protein-coding 626005455 Znf511 zinc finger protein 511 2 61830315 61834704 - 116891355 MODEL JAAIVD010000001;XM_032892351 XP_032748242 protein-coding 626005465 LOC116890937 uncharacterized LOC116890937 2 9214974 9216095 - 116890937 MODEL JAAIVD010000001;XR_004386796 ncrna 626005471 Prss48 serine protease 48 3 67561834 67572003 + 22301074 116895169 MODEL JAAIVD010000012;XM_032896527 XP_032752418 protein-coding 626005480 Dnajb2 DnaJ heat shock protein family (Hsp40) member B2 ENCODES a protein that exhibits ATPase activator activity (ortholog); Hsp70 protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 2 (ortholog); autosomal recessive distal hereditary motor neuronopathy 5 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 4 148593337 148601743 + 30032202 116899528 MODEL JAAIVD010000003;XM_032901398 XP_032757289 dnaJ homolog subfamily B member 2 protein-coding 626005492 LOC116910353 CMRF-35-like molecule 4 9 69213735 69217598 + 30032202 116910353 MODEL JAAIVD010000002;XM_032914208 XP_032770099 protein-coding 626005498 Pcdh7 protocadherin 7 INVOLVED IN regulation of postsynapse assembly (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 11 47912876 48326312 + 22301074 116912485 MODEL JAAIVD010000006;XM_032916552;XM_032916553;XM_032916554;XM_032916555;XM_032916556;XM_032916557;XM_032916558;XM_032916559;XM_032916561 XP_032772443;XP_032772444;XP_032772445;XP_032772446;XP_032772447;XP_032772448;XP_032772449;XP_032772450;XP_032772452 protocadherin-7 protein-coding 626005528 LOC116888217 dnaJ homolog subfamily C member 8-like X 128940052 128940906 - 116888217 MODEL JAAIVD010000014 pseudo 626005529 Nectin1 nectin cell adhesion molecule 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye morphogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH cleft lip (ortholog); cleft lip-palate-ectodermal dysplasia syndrome (ortholog); cleft palate (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axon (ortholog) 8 38312951 38376193 + 30032202 116906677 MODEL JAAIVD010000027;XM_032909463 XP_032765354 nectin-1 protein-coding 626005539 Nfatc2ip nuclear factor of activated T cells 2 interacting protein INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 2 75534884 75551712 + 22301074;30032202 116891528 MODEL JAAIVD010000001;XM_032892677 XP_032748568 NFATC2-interacting protein protein-coding 626005551 LOC116907152 olfactory receptor 8B3-like 8 32208142 32209073 + 116907152 MODEL JAAIVD010000027 pseudo 626005552 Marchf8 membrane associated ring-CH-type finger 8 ENCODES a protein that exhibits MHC class II protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen via MHC class II (ortholog); negative regulation of MHC class II biosynthetic process (ortholog); protein polyubiquitination (ortholog); ASSOCIATED WITH Esophageal Neoplasms (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) 6 30296803 30396360 - 22301074;30032202 116903366 MODEL JAAIVD010000024;XM_032905846;XM_032905847;XM_032905848;XM_032905849;XM_032905850;XM_032905851;XM_032905852;XM_032905853 XP_032761737;XP_032761738;XP_032761739;XP_032761740;XP_032761741;XP_032761742;XP_032761743;XP_032761744 E3 ubiquitin-protein ligase MARCH8 protein-coding 626005581 LOC116893364 40S ribosomal protein S2-like 2 164101434 164195376 + 116893364 MODEL JAAIVD010000001 pseudo 626005582 LOC116890464 small nucleolar RNA SNORA8 1 246122314 246122450 + 116890464 MODEL JAAIVD010000025;XR_004386655 snorna 626005585 Robo1 roundabout guidance receptor 1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); identical protein binding (ortholog); LRR domain binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); axon guidance (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); atrial fibrillation (ortholog); autistic disorder (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell surface (ortholog) 4 68921773 69056270 - 22301074 116898378 MODEL JAAIVD010000003;XM_032899684 XP_032755575 roundabout homolog 1 protein-coding 626005613 Adprm ADP-ribose/CDP-alcohol diphosphatase, manganese dependent 9 46641514 46653761 - 30032202 116908885 MODEL JAAIVD010000002;XM_032912331 XP_032768222 manganese-dependent ADP-ribose/CDP-alcohol diphosphatase protein-coding 626005622 Tia1 TIA1 cytotoxic granule associated RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of cytokine production (ortholog); negative regulation of translation (ortholog); positive regulation of epithelial cell apoptotic process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 26 (ortholog); genetic disease (ortholog); spinal muscular atrophy with lower extremity predominant 2A (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 6 59867471 59896629 - 30032202 116903553 MODEL JAAIVD010000024;XM_032906168 XP_032762059 nucleolysin TIA-1 protein-coding 626005639 Cpsf7 cleavage and polyadenylation specific factor 7 INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog); mRNA cleavage factor complex (ortholog) 2 9998727 10023178 + 30032202 116890954 MODEL JAAIVD010000001;XM_032891605;XM_032891606;XM_032891607;XM_032891608;XM_032891609;XM_032891610;XR_004386797 XP_032747496;XP_032747497;XP_032747498;XP_032747499;XP_032747500;XP_032747501 cleavage and polyadenylation specificity factor subunit 7 protein-coding 626005674 Dach1 dachshund family transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN development of primary female sexual characteristics (ortholog); epithelial cell proliferation (ortholog); negative regulation of cell migration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 12 26270352 26635450 + 116913909 MODEL JAAIVD010000007;XM_032918184 XP_032774075 dachshund homolog 1 protein-coding 626005691 Tnfsf4 TNF superfamily member 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); tumor necrosis factor receptor binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); CD4-positive, alpha-beta T cell costimulation (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH cervical squamous cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); leishmaniasis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 10 40709960 40734067 + 22301074;30032202 116911351 MODEL JAAIVD010000005;XM_032915271 XP_032771162 tumor necrosis factor ligand superfamily member 4 protein-coding 626005698 Adcy5 adenylate cyclase 5 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); adenylate cyclase binding (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; endothelin signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Birth Weight (ortholog); carcinoma (ortholog); FOUND IN cilium (ortholog); endosome (ortholog); membrane (ortholog) 4 19939142 20085662 + 22301074;30032202 116898805 MODEL JAAIVD010000003;XM_032900156 XP_032756047 adenylate cyclase type 5 protein-coding 626005723 Rcc1 regulator of chromosome condensation 1 ENCODES a protein that exhibits chromatin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); histone binding (ortholog); INVOLVED IN chromosome segregation (ortholog); G1/S transition of mitotic cell cycle (ortholog); mitotic spindle organization (ortholog); FOUND IN chromatin (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) 1 25907443 25919807 + 30032202 116895497 MODEL JAAIVD010000025;XM_032896755;XM_032896759;XM_032896761;XM_032896767;XM_032896773;XM_032896779;XM_032896783 XP_032752646;XP_032752650;XP_032752652;XP_032752658;XP_032752664;XP_032752670;XP_032752674 regulator of chromosome condensation protein-coding 626005755 Bloc1s4 biogenesis of lysosomal organelles complex 1 subunit 4 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); melanosome organization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-1 complex (ortholog); cytoplasm (ortholog) 11 68386409 68387427 + 30032202 116912718 MODEL JAAIVD010000006;XM_032916844 XP_032772735 biogenesis of lysosome-related organelles complex 1 subunit 4 protein-coding 626005760 LOC116903903 TRPM8 channel-associated factor 2 6 98255697 98285128 - 30032202 116903903 MODEL JAAIVD010000024;XM_032906671 XP_032762562 protein-coding 626005771 LOC116902260 zinc finger protein 431-like 5 142872900 142908085 - 30032202 116902260 MODEL JAAIVD010000023;XM_032904679 XP_032760570 protein-coding 626005779 Nr3c2 nuclear receptor subfamily 3 group C member 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); histone acetyltransferase binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); cellular response to aldosterone (ortholog); intracellular sodium ion homeostasis (ortholog); PARTICIPATES IN aldosterone signaling pathway; amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 17 24130093 24468185 + 22301074 116886711 MODEL JAAIVD010000011;XM_032888217;XM_032888218;XM_032888219;XM_032888220;XM_032888221 XP_032744108;XP_032744109;XP_032744110;XP_032744111;XP_032744112 mineralocorticoid receptor protein-coding 626005806 Garnl3 GTPase activating Rap/RanGAP domain like 3 ASSOCIATED WITH intellectual disability (ortholog) 5 2504456 2645145 + 22301074;30032202 116901124 MODEL JAAIVD010000023;XM_032902708;XM_032902709;XM_032902710;XM_032902711;XM_032902712;XM_032902713;XM_032902714 XP_032758599;XP_032758600;XP_032758601;XP_032758602;XP_032758603;XP_032758604;XP_032758605 GTPase-activating Rap/Ran-GAP domain-like protein 3 protein-coding 626005860 LOC116893462 zinc finger protein 501-like 2 179079330 179082106 + 30032202 116893462 MODEL JAAIVD010000001;XM_032895222 XP_032751113 protein-coding 626005867 Prdm2 PR/SET domain 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN determination of adult lifespan (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Contracture (ortholog); Thyroid Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 14953841 15059287 + 22301074;30032202 116893127 MODEL JAAIVD010000025;XM_032895061;XM_032895066 XP_032750952;XP_032750957 PR domain zinc finger protein 2 protein-coding 626005883 Ptger3 prostaglandin E receptor 3 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); bicarbonate transport (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH asthma (ortholog); Brain Injuries (ortholog); cicatricial pemphigoid (ortholog); FOUND IN brush border membrane (ortholog); cell surface (ortholog); neuronal cell body (ortholog) 3 3961107 4039875 - 22301074;30032202 116896130 MODEL JAAIVD010000012;XM_032897113;XM_032897114 XP_032753004;XP_032753005 prostaglandin E2 receptor EP3 subtype protein-coding 626005893 LOC116899765 U6 spliceosomal RNA 4 181337501 181337609 + 116899765 MODEL JAAIVD010000003;XR_004387779 snrna 626005896 Rpn1 ribophorin I INVOLVED IN protein glycosylation (ortholog); protein N-linked glycosylation (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 58217631 58239887 - 22301074;30032202 116903528 MODEL JAAIVD010000024;XM_032906138 XP_032762029 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 protein-coding 626005910 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92622899 92622970 - 116904847 MODEL JAAIVD010000024 trna 626005911 LOC116892628 vomeronasal type-1 receptor 4-like 2 174023205 174024149 - 22301074;30032202 116892628 MODEL JAAIVD010000001;XM_032894446 XP_032750337 protein-coding 626005914 LOC116901446 voltage-dependent anion-selective channel protein 1-like 5 39511251 39512082 - 116901446 MODEL JAAIVD010000023 pseudo 626005915 LOC116897932 olfactory receptor 181 4 42841027 42841980 - 22301074;30032202 116897932 MODEL JAAIVD010000003;XM_032899332 XP_032755223 protein-coding 626005918 Ahctf1 AT-hook containing transcription factor 1 INVOLVED IN nuclear pore complex assembly (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); strabismus (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); kinetochore (ortholog) 10 58073000 58127555 - 116911785 MODEL JAAIVD010000005;XM_032915780 XP_032771671 protein ELYS protein-coding 626005958 Rbbp5 RB binding protein 5, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits histone binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); response to estrogen (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN histone methyltransferase complex (ortholog); MLL1 complex (ortholog); MLL1/2 complex (ortholog) 10 3345839 3372077 - 22301074;30032202 116911036 MODEL JAAIVD010000005;XM_032914777;XM_032914779;XM_032914780;XM_032914781 XP_032770668;XP_032770670;XP_032770671;XP_032770672 retinoblastoma-binding protein 5 protein-coding 626005986 LOC116898600 zinc finger protein 844-like 4 182364850 182367074 - 116898600 MODEL JAAIVD010000003 pseudo 626005987 Pex5l peroxisomal biogenesis factor 5 like ENCODES a protein that exhibits intracellularly cyclic nucleotide-activated monoatomic cation channel activity (ortholog); peroxisome matrix targeting signal-1 binding (ortholog); peroxisome targeting sequence binding (ortholog); INVOLVED IN maintenance of protein location (ortholog); positive regulation of corticotropin secretion (ortholog); regulated exocytosis (ortholog); FOUND IN cell tip (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 121796547 122091428 + 22301074;30032202 116896956 MODEL JAAIVD010000012;XM_032898525;XM_032898526;XM_032898527;XM_032898528;XM_032898529;XM_032898530;XM_032898531;XM_032898532;XM_032898533 XP_032754416;XP_032754417;XP_032754418;XP_032754419;XP_032754420;XP_032754421;XP_032754422;XP_032754423;XP_032754424 PEX5-related protein protein-coding 626006027 LOC116893501 vomeronasal type-2 receptor 116-like 2 185166006 185194588 - 116893501 MODEL JAAIVD010000001 pseudo 626006028 LOC116914193 U6 spliceosomal RNA 12 74275192 74275290 + 116914193 MODEL JAAIVD010000007 pseudo 626006029 Cenpw centromere protein W INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) 2 204497666 204502838 - 22301074;30032202 116892925 MODEL JAAIVD010000001;XM_032894854;XM_032894855 XP_032750745;XP_032750746 protein-coding 626006038 Rfpl4b ret finger protein like 4B 18 38172862 38201001 + 116886972 MODEL JAAIVD010000013;XM_032888463 XP_032744354 ret finger protein-like 4B protein-coding 626006045 LOC116901061 vomeronasal secretory protein 2-like 5 142218121 142220974 - 30032202 116901061 MODEL JAAIVD010000023;XM_032902634 XP_032758525 protein-coding 626006053 Cep95 centrosomal protein 95 FOUND IN centrosome (ortholog); spindle pole (ortholog) 9 72311827 72340243 - 30032202 116910183 MODEL JAAIVD010000002;XM_032914044 XP_032769935 centrosomal protein of 95 kDa protein-coding 626006077 LOC116887976 endoplasmic reticulum-Golgi intermediate compartment protein 2-like X 68312653 68314606 + 116887976 MODEL JAAIVD010000014 pseudo 626006078 Mgam2 maltase-glucoamylase 2 (putative) ASSOCIATED WITH Hirschsprung's disease (ortholog) 6 41602750 41703967 + 22301074;30032202 116904271 MODEL JAAIVD010000024;XM_032907215 XP_032763106 putative maltase-glucoamylase-like protein FLJ16351 protein-coding 626006129 Carf calcium responsive transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN granular component (ortholog); nucleus (ortholog) 5 6248322 6294149 - 30032202 116900003 MODEL JAAIVD010000023;XM_032901808 XP_032757699 calcium-responsive transcription factor protein-coding 626006147 LOC116884861 prohibitin-like 15 23835378 23836203 + 116884861 MODEL JAAIVD010000010 pseudo 626006148 LOC116888706 THUMP domain-containing protein 3-like X 37438520 37440069 + 22301074;30032202 116888706 MODEL JAAIVD010000014;XM_032889996 XP_032745887 protein-coding 626006152 LOC116907724 40S ribosomal protein S6-like 8 22853234 22853749 + 116907724 MODEL JAAIVD010000027 pseudo 626006153 LOC116898503 negative elongation factor E-like 4 127517691 127520037 - 116898503 MODEL JAAIVD010000003 pseudo 626006154 Znf25 zinc finger protein 25 6 28265134 28282998 + 30032202 116903348 MODEL JAAIVD010000024;XM_032905810;XM_032905811 XP_032761701;XP_032761702 protein-coding 626006167 Ubald1 UBA like domain containing 1 ASSOCIATED WITH Rubinstein-Taybi syndrome (ortholog) 9 17023735 17029109 + 22301074 116909624 MODEL JAAIVD010000002;XM_032913253 XP_032769144 UBA-like domain-containing protein 1 protein-coding 626006174 LOC116890580 small nucleolar RNA SNORA17 1 97667357 97667476 + 116890580 MODEL JAAIVD010000025 pseudo 626006175 LOC116895186 small nuclear ribonucleoprotein G-like 3 175118039 175118310 + 116895186 MODEL JAAIVD010000012 pseudo 626006176 Prdm13 PR/SET domain 13 ENCODES a protein that exhibits chromatin binding (ortholog); histone methyltransferase activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN GABAergic neuron differentiation (ortholog); hypothalamus cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH CEREBELLAR DYSFUNCTION, IMPAIRED INTELLECTUAL DEVELOPMENT, AND HYPOGONADOTROPIC HYPOGONADISM (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 1 121653699 121661212 + 22301074;30032202 116901327 MODEL JAAIVD010000025;XM_032903187 XP_032759078 PR domain zinc finger protein 13 protein-coding 626006182 Ccdc186 coiled-coil domain containing 186 INVOLVED IN glucose homeostasis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); response to bacterium (ortholog); ASSOCIATED WITH genetic disease (ortholog); pulmonary valve stenosis (ortholog); FOUND IN Golgi apparatus (ortholog) 2 59342166 59372575 + 30032202 116891329 MODEL JAAIVD010000001;XM_032892259 XP_032748150 coiled-coil domain-containing protein 186 protein-coding 626006202 LOC116883411 aldo-keto reductase family 1 member C18 14 18415184 18432784 - 30032202 116883411 MODEL JAAIVD010000009;XM_032884536;XM_032884537 XP_032740427;XP_032740428 protein-coding 626006219 LOC116905266 uncharacterized LOC116905266 7 98388644 98398148 + 116905266 MODEL JAAIVD010000026;XR_004388509 ncrna 626006223 LOC116909854 secreted and transmembrane protein 1b-like 9 62967811 62976675 + 30032202 116909854 MODEL JAAIVD010000002;XM_032913580;XM_032913581 XP_032769471;XP_032769472 protein-coding 626006234 LOC116909406 hemoglobin subunit alpha-1/2-like 9 3583140 3583962 - 22301074;30032202 116909406 MODEL JAAIVD010000002;XM_032912973 XP_032768864 protein-coding 626006240 LOC116888000 actin, cytoplasmic 1-like X 75599957 75600967 + 116888000 MODEL JAAIVD010000014 pseudo 626006241 Ppp1r14b protein phosphatase 1 regulatory inhibitor subunit 14B ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); ASSOCIATED WITH melanoma (ortholog) 2 818612 821026 - 22301074;30032202 116894813 MODEL JAAIVD010000001;XM_032896482 XP_032752373 protein phosphatase 1 regulatory subunit 14B protein-coding 626006249 Aldh18a1 aldehyde dehydrogenase 18 family member A1 ENCODES a protein that exhibits glutamate 5-kinase activity (ortholog); glutamate-5-semialdehyde dehydrogenase activity (ortholog); identical protein binding (ortholog); INVOLVED IN citrulline biosynthetic process (ortholog); glutamate metabolic process (ortholog); obsolete proline biosynthetic process (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant cutis laxa (ortholog); autosomal dominant cutis laxa 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 39678027 39711688 - 22301074;30032202 116891150 MODEL JAAIVD010000001;XM_032891937;XM_032891938 XP_032747828;XP_032747829 delta-1-pyrroline-5-carboxylate synthase protein-coding 626006273 Cngb1 cyclic nucleotide gated channel subunit beta 1 ENCODES a protein that exhibits cAMP binding (ortholog); cGMP binding (ortholog); cyclic nucleotide-activated monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); detection of chemical stimulus involved in sensory perception of smell (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); optic atrophy (ortholog); FOUND IN intracellular cyclic nucleotide activated cation channel complex (ortholog); membrane (ortholog); non-motile cilium membrane (ortholog) 17 2105576 2166481 - 30032202 116886285 MODEL JAAIVD010000011;XM_032887711;XM_032887712;XM_032887713 XP_032743602;XP_032743603;XP_032743604 cyclic nucleotide-gated cation channel beta-1 protein-coding 626006318 Fuz fuzzy planar cell polarity protein ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); aorta development (ortholog); cardiac septum development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); neural tube defect (ortholog); short-rib thoracic dysplasia 6 with or without polydactyly (ortholog) 2 154642802 154647275 - 22301074;30032202 116892185 MODEL JAAIVD010000001;XM_032893706 XP_032749597 protein fuzzy homolog protein-coding 626006333 LOC116905595 calmodulin-lysine N-methyltransferase 7 7532115 7589108 - 30032202 116905595 MODEL JAAIVD010000026;XM_032908597 XP_032764488 protein-coding 626006345 LOC116913585 olfactory receptor 1537-like 12 320189 321133 - 22301074;30032202 116913585 MODEL JAAIVD010000007;XM_032917813 XP_032773704 protein-coding 626006348 LOC116912806 60S ribosomal protein L27a-like 11 93850667 93851110 - 116912806 MODEL JAAIVD010000006 pseudo 626006349 Ankrd13c ankyrin repeat domain 13C ENCODES a protein that exhibits protein carrier chaperone (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to prostaglandin D stimulus (ortholog); protein targeting to membrane (ortholog); regulation of anoikis (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 3 3582929 3629847 - 22301074;30032202 116896127 MODEL JAAIVD010000012;XM_032897109;XM_032897111 XP_032753000;XP_032753002 ankyrin repeat domain-containing protein 13C protein-coding 626006367 B3gntl1 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1 ENCODES a protein that exhibits tRNA-queuosine(34) galactosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog) 9 62364886 62419853 + 116909257 MODEL JAAIVD010000002;XM_032912779 XP_032768670 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1 protein-coding 626006383 Mfap1 microfibril associated protein 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN centrosome (ortholog); microfibril (ortholog); nucleoplasm (ortholog) 5 99618037 99634976 - 30032202 116901870 MODEL JAAIVD010000023;XM_032904076 XP_032759967 microfibrillar-associated protein 1 protein-coding 626006395 LOC116911126 40S ribosomal protein S3a-like 10 20351926 20352815 + 22301074;30032202 116911126 MODEL JAAIVD010000005;XM_032914973 XP_032770864 protein-coding 626006400 Nup205 nucleoporin 205 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN nuclear pore complex assembly (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); nephrotic syndrome type 13 (ortholog); nephrotic syndrome type 2 (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear periphery (ortholog) 6 104418344 104484117 - 22301074;30032202 116903966 MODEL JAAIVD010000024;XM_032906761;XM_032906762 XP_032762652;XP_032762653 nuclear pore complex protein Nup205 protein-coding 626006450 LOC116913921 SNF-related serine/threonine-protein kinase-like 12 30204827 30205832 + 116913921 MODEL JAAIVD010000007 pseudo 626006451 LOC116910384 schlafen family member 12-like 9 87447305 87451265 - 116910384 MODEL JAAIVD010000002;XM_032914228 XP_032770119 protein-coding 626006457 Rnase9 ribonuclease A family member 9 (inactive) INVOLVED IN positive regulation of flagellated sperm motility involved in capacitation (ortholog) 12 72273900 72274448 + 30032202 116913389 MODEL JAAIVD010000007;XM_032917565 XP_032773456 inactive ribonuclease-like protein 9 protein-coding 626006460 LOC116885170 uncharacterized LOC116885170 16 30680167 30688479 + 116885170 MODEL JAAIVD010000004;XR_004385985;XR_004385986;XR_004385987;XR_004385988;XR_004385989;XR_004385990 ncrna 626006478 Zbtb44 zinc finger and BTB domain containing 44 8 26760165 26803400 + 22301074 116906781 MODEL JAAIVD010000027;XM_032909632;XM_032909633;XM_032909634;XM_032909635 XP_032765523;XP_032765524;XP_032765525;XP_032765526 zinc finger and BTB domain-containing protein 44 protein-coding 626006495 LOC116894240 vomeronasal type-2 receptor 116-like 2 114146898 114155274 - 116894240 MODEL JAAIVD010000001 pseudo 626006496 Bet1l Bet1 golgi vesicular membrane trafficking protein like ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN regulation of retrograde vesicle-mediated transport, Golgi to ER (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH endometrial adenocarcinoma (ortholog); uterine fibroid (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 2 8630195 8633853 + 30032202 116890899 MODEL JAAIVD010000001;XM_032891520 XP_032747411 BET1-like protein protein-coding 626006505 Cdk10 cyclin dependent kinase 10 ENCODES a protein that exhibits cyclin-dependent protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); peptidyl-threonine phosphorylation (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Al Kaissi Syndrome (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN ciliary basal body (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleus (ortholog) 17 42830361 42839613 + 22301074;30032202 116886127 MODEL JAAIVD010000011;XM_032887467;XM_032887468;XM_032887469 XP_032743358;XP_032743359;XP_032743360 cyclin-dependent kinase 10 protein-coding 626006529 LOC116901572 DNA polymerase epsilon subunit 4-like 5 59424398 59424782 - 22301074;30032202 116901572 MODEL JAAIVD010000023;XM_032903568 XP_032759459 protein-coding 626006533 LOC116888109 cilia- and flagella-associated protein 47-like X 100615375 100651070 + 116888109 MODEL JAAIVD010000014;XM_032889466 XP_032745357 protein-coding 626006541 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 100484849 100484920 - 116902676 MODEL JAAIVD010000023 trna 626006542 Sp2 Sp2 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circulatory system development (ortholog); embryonic organ development (ortholog); fibroblast proliferation (ortholog); FOUND IN nucleoplasm (ortholog) 9 57408389 57432034 + 30032202 116908664 MODEL JAAIVD010000002;XM_032911948;XM_032911949 XP_032767839;XP_032767840 transcription factor Sp2 protein-coding 626006556 LOC116897443 U6 spliceosomal RNA 3 177091084 177091182 - 116897443 MODEL JAAIVD010000012 pseudo 626006557 LOC116904814 U6 spliceosomal RNA 6 39940669 39940779 + 116904814 MODEL JAAIVD010000024;XR_004388465 snrna 626006560 Sigmar1 sigma non-opioid intracellular receptor 1 ENCODES a protein that exhibits G protein-coupled opioid receptor activity (ortholog); identical protein binding (ortholog); mu-type opioid receptor binding (ortholog); INVOLVED IN conditioned place preference (ortholog); cyclooxygenase pathway (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amnestic disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 3809934 3812758 + 30032202 116891302 MODEL JAAIVD010000025;XM_032892215;XR_004386827 XP_032748106 protein-coding 626006571 LOC116911963 protein SET-like 11 23783906 23784690 - 22301074;30032202 116911963 MODEL JAAIVD010000006;XM_032915888 XP_032771779 protein-coding 626006574 LOC116897994 sodium/potassium-transporting ATPase subunit beta-3-like 4 56578790 56579675 - 116897994 MODEL JAAIVD010000003 pseudo 626006575 Gmeb2 glucocorticoid modulatory element binding protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 158348559 158388076 - 30032202 116902434 MODEL JAAIVD010000023;XM_032904970 XP_032760861 glucocorticoid modulatory element-binding protein 2 protein-coding 626006589 LOC116886800 small nucleolar RNA SNORA72 17 42433645 42433773 - 116886800 MODEL JAAIVD010000011;XR_004386187 snorna 626006592 LOC116890349 U6 spliceosomal RNA 1 253992493 253992596 + 116890349 MODEL JAAIVD010000025;XR_004386569 snrna 626006595 Ptprt protein tyrosine phosphatase receptor type T ENCODES a protein that exhibits alpha-actinin binding (ortholog); alpha-catenin binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to interleukin-6 (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); colon cancer (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 5 140820002 141899748 - 22301074 116902254 MODEL JAAIVD010000023;XM_032904674 XP_032760565 receptor-type tyrosine-protein phosphatase T protein-coding 626006631 LOC116883979 ADP-ribosylation factor 1-like 14 36775368 36775896 - 116883979 MODEL JAAIVD010000009 pseudo 626006632 Spatc1l spermatogenesis and centriole associated 1 like ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase A regulatory subunit binding (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); positive regulation of cAMP/PKA signal transduction (ortholog); spermatogenesis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); sperm head-tail coupling apparatus (ortholog) 8 106575597 106584711 - 116906858 MODEL JAAIVD010000027;XM_032909757;XM_032909758 XP_032765648;XP_032765649 speriolin-like protein protein-coding 626006645 LOC116912188 gem-associated protein 8-like 11 2604039 2604955 - 116912188 MODEL JAAIVD010000006 pseudo 626006646 LOC116906840 cytochrome P450 4F22 1 156943225 156958812 + 22301074;30032202 116906840 MODEL JAAIVD010000025;XM_032909732 XP_032765623 protein-coding 626006660 LOC116888980 histone H2A-Bbd type 1-like X 11412005 11413033 - 22301074;30032202 116888980 MODEL JAAIVD010000014;XM_032890202 XP_032746093 protein-coding 626006664 LOC116894198 olfactory receptor 502-like 2 106224621 106225592 - 22301074;30032202 116894198 MODEL JAAIVD010000001;XM_032895910 XP_032751801 protein-coding 626006667 LOC116910671 small nucleolar RNA SNORA67 9 49278830 49278972 - 116910671 MODEL JAAIVD010000002;XR_004389203 snorna 626006670 LOC116901031 zinc finger protein 120-like 5 129922021 129927826 + 30032202 116901031 MODEL JAAIVD010000023;XM_032902617 XP_032758508 protein-coding 626006678 Cd37 CD37 molecule INVOLVED IN defense response to protozoan (ortholog); negative regulation of myeloid dendritic cell activation (ortholog); negative regulation of T cell proliferation (ortholog); FOUND IN immunological synapse (ortholog) 2 154300998 154306155 + 22301074;30032202 116892161 MODEL JAAIVD010000001;XM_032893657 XP_032749548 leukocyte antigen CD37 protein-coding 626006690 Dnah7 dynein axonemal heavy chain 7 INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN cilium (ortholog); inner dynein arm (ortholog) 4 128160976 128436039 - 22301074;30032202 116899382 MODEL JAAIVD010000003;XM_032901100 XP_032756991 dynein heavy chain 7, axonemal protein-coding 626006758 LOC116909011 olfactory receptor 1500-like 9 44616251 44617183 + 22301074;30032202 116909011 MODEL JAAIVD010000002;XM_032912485 XP_032768376 protein-coding 626006762 Dennd2b DENN domain containing 2B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog) 2 91844406 91958718 + 30032202 116891676 MODEL JAAIVD010000001;XM_032892933;XM_032892934;XM_032892935;XM_032892936 XP_032748824;XP_032748825;XP_032748826;XP_032748827 suppression of tumorigenicity 5 protein protein-coding 626006797 Abca7 ATP binding cassette subfamily A member 7 ENCODES a protein that exhibits apolipoprotein A-I receptor activity (ortholog); floppase activity (ortholog); phosphatidylcholine floppase activity (ortholog); INVOLVED IN amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta formation (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 9 (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) 1 154860216 154880239 - 22301074;30032202 116905460 MODEL JAAIVD010000025;XM_032908421 XP_032764312 phospholipid-transporting ATPase ABCA7 protein-coding 626006848 LOC116892882 60S ribosomal protein L7a-like 2 198573488 198574408 - 22301074 116892882 MODEL JAAIVD010000001;XM_032894793 XP_032750684 protein-coding 626006852 LOC116906919 40S ribosomal protein S2-like 8 82525263 82526133 - 116906919 MODEL JAAIVD010000027 pseudo 626006853 Trrap transformation/transcription domain associated protein ENCODES a protein that exhibits chromatin binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 75 (ortholog); Developmental Delay with or without Dysmorphic Facies and Autism (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog); NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) 16 8332407 8421125 - 22301074;30032202 116885813 MODEL JAAIVD010000004;XM_032887153 XP_032743044 transformation/transcription domain-associated protein protein-coding 626006930 LOC116902811 putative vomeronasal receptor-like protein 4 6 83877978 83878880 + 22301074;30032202 116902811 MODEL JAAIVD010000024;XM_032905144 XP_032761035 protein-coding 626006933 LOC116912327 vomeronasal type-2 receptor 116-like 11 19256166 19272800 - 22301074;30032202 116912327 MODEL JAAIVD010000006;XM_032916363;XM_032916364;XM_032916365 XP_032772254;XP_032772255;XP_032772256 protein-coding 626006946 LOC116901874 uncharacterized LOC116901874 5 99872081 99872498 - 116901874 MODEL JAAIVD010000023;XR_004388027 ncrna 626006950 LOC116914991 40S ribosomal protein S3a-like 13 26766903 26783700 + 116914991 MODEL JAAIVD010000008 pseudo 626006951 LOC116912286 UDP-glucuronosyltransferase 2A1 11 1423008 1446708 + 22301074 116912286 MODEL JAAIVD010000006;XM_032916281;XM_032916283;XM_032916284;XM_032916285;XM_032916286 XP_032772172;XP_032772174;XP_032772175;XP_032772176;XP_032772177 UDP-glucuronosyltransferase 2A2 protein-coding 626006967 Tpp1 tripeptidyl peptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); lysophosphatidic acid binding (ortholog); peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); epithelial cell differentiation (ortholog); lysosomal protein catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Angelman syndrome (ortholog); autosomal recessive spinocerebellar ataxia 7 (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); membrane raft (ortholog) 2 104587631 104593584 - 22301074;30032202 116891827 MODEL JAAIVD010000001;XM_032893193 XP_032749084 tripeptidyl-peptidase 1 protein-coding 626006984 LOC116884970 uncharacterized LOC116884970 15 15264347 15272417 - 116884970 MODEL JAAIVD010000010;XR_004385910 ncrna 626006990 Faah fatty acid amide hydrolase ENCODES a protein that exhibits amidase activity (ortholog); fatty acid amide hydrolase activity (ortholog); hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN fatty acid catabolic process (ortholog); fatty acid metabolic process (ortholog); monoacylglycerol catabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cocaine dependence (ortholog); drug dependence (ortholog); FOUND IN glutamatergic synapse (ortholog); organelle membrane (ortholog); postsynapse (ortholog) 1 39680231 39699817 - 30032202 116898180 MODEL JAAIVD010000025;XM_032899546 XP_032755437 fatty-acid amide hydrolase 1 protein-coding 626007009 LOC116893722 olfactory receptor 10Q1-like 2 13708680 13709639 + 22301074 116893722 MODEL JAAIVD010000001;XM_032895436 XP_032751327 protein-coding 626007012 LOC116912015 serine/arginine-rich splicing factor 3-like 11 66584869 66654849 + 116912015 MODEL JAAIVD010000006 pseudo 626007013 LOC116909089 lanC-like protein 3 9 75096 76489 + 22301074;30032202 116909089 MODEL JAAIVD010000002;XM_032912561 XP_032768452 protein-coding 626007018 LOC116904793 U2 spliceosomal RNA 6 62291324 62291515 + 116904793 MODEL JAAIVD010000024;XR_004388455 snrna 626007021 Fdcsp follicular dendritic cell secreted protein 11 1062318 1066602 - 116912174 MODEL JAAIVD010000006;XM_032916105 XP_032771996 follicular dendritic cell secreted peptide protein-coding 626007029 Pdcd7 programmed cell death 7 INVOLVED IN positive regulation of apoptotic signaling pathway (ortholog); positive regulation of T cell apoptotic process (ortholog); response to glucocorticoid (ortholog); FOUND IN spliceosomal complex (ortholog); U12-type spliceosomal complex (ortholog); U2AF complex (ortholog) 8 59651617 59665851 + 116906941 MODEL JAAIVD010000027;XM_032909865 XP_032765756 programmed cell death protein 7 protein-coding 626007038 Immp2l inner mitochondrial membrane peptidase subunit 2 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN blood circulation (ortholog); brain development (ortholog); cerebellum vasculature development (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH autistic disorder (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN mitochondrial inner membrane peptidase complex (ortholog); mitochondrion (ortholog) 7 54205613 55117580 + 22301074;30032202 116904992 MODEL JAAIVD010000026;XM_032907673;XM_032907674 XP_032763564;XP_032763565 mitochondrial inner membrane protease subunit 2 protein-coding 626007050 Irak3 interleukin 1 receptor associated kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); lipopolysaccharide-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 198121101 198180038 - 22301074;30032202 116909419 MODEL JAAIVD010000025;XM_032912994 XP_032768885 interleukin-1 receptor-associated kinase 3 protein-coding 626007066 Etfbkmt electron transfer flavoprotein subunit beta lysine methyltransferase ENCODES a protein that exhibits heat shock protein binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 6801805 6811284 + 30032202 116903116 MODEL JAAIVD010000024;XM_032905452 XP_032761343 electron transfer flavoprotein beta subunit lysine methyltransferase protein-coding 626007075 Thnsl2 threonine synthase like 2 ENCODES a protein that exhibits phosphatase activity (ortholog); pyridoxal phosphate binding (ortholog); serine binding (ortholog) 6 74142225 74160766 - 30032202 116903677 MODEL JAAIVD010000024;XM_032906337 XP_032762228 threonine synthase-like 2 protein-coding 626007088 LOC116899863 small nucleolar RNA SNORA17 4 156660626 156660752 + 116899863 MODEL JAAIVD010000003;XR_004387857 snorna 626007091 LOC116892320 actin, cytoplasmic 2-like 2 165602940 165604402 - 116892320 MODEL JAAIVD010000001 pseudo 626007092 LOC116911581 ubiquitin-conjugating enzyme E2 D4-like 10 17585315 17585794 - 116911581 MODEL JAAIVD010000005 pseudo 626007093 LOC116906384 U1 spliceosomal RNA 7 68087376 68087539 + 116906384 MODEL JAAIVD010000026;XR_004388654 snrna 626007096 LOC116890326 U6 spliceosomal RNA 1 40290600 40290705 + 116890326 MODEL JAAIVD010000025;XR_004386549 snrna 626007099 LOC116910649 uncharacterized LOC116910649 1 210733472 210734855 - 116910649 MODEL JAAIVD010000025;XR_004389189 ncrna 626007103 LOC116889297 protein BTG1-like X 103671677 103672167 + 116889297 MODEL JAAIVD010000014 pseudo 626007104 LOC116915074 beta-defensin 39-like 13 65198558 65204653 + 22301074;30032202 116915074 MODEL JAAIVD010000008;XM_032919492 XP_032775383 protein-coding 626007108 LOC116893860 olfactory receptor 226-like 2 61665727 61666683 + 22301074 116893860 MODEL JAAIVD010000001;XM_032895580 XP_032751471 protein-coding 626007111 Dram1 DNA damage regulated autophagy modulator 1 INVOLVED IN cellular response to oxygen-glucose deprivation (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog) 1 167397872 167433731 - 30032202 116889976 MODEL JAAIVD010000025;XM_032890769 XP_032746660 DNA damage-regulated autophagy modulator protein 1 protein-coding 626007122 Lsm3 LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits U6 snRNA 3'-end binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) 6 55419174 55425465 - 22301074;30032202 116903498 MODEL JAAIVD010000024;XM_032906093 XP_032761984 U6 snRNA-associated Sm-like protein LSm3 protein-coding 626007130 Add1 adducin 1 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeletal anchor activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); barbed-end actin filament capping (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); Conotruncal Cardiac Defects (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 11 70424625 70482454 - 30032202 116912819 MODEL JAAIVD010000006;XM_032916986;XM_032916987;XM_032916988;XM_032916989;XM_032916990;XM_032916991;XM_032916992;XM_032916993;XM_032916994;XM_032916995;XM_032916996;XM_032916997;XM_032916999;XM_032917000;XM_032917001 XP_032772877;XP_032772878;XP_032772879;XP_032772880;XP_032772881;XP_032772882;XP_032772883;XP_032772884;XP_032772885;XP_032772886;XP_032772887;XP_032772888;XP_032772890;XP_032772891;XP_032772892 alpha-adducin protein-coding 626007183 Sf3b4 splicing factor 3b subunit 4 ENCODES a protein that exhibits splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH cervical cancer (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN nucleus (ortholog); spliceosomal complex (ortholog); U12-type spliceosomal complex (ortholog) 3 61105447 61110545 - 22301074;30032202 116896523 MODEL JAAIVD010000012;XM_032897705 XP_032753596 protein-coding 626007193 LOC116888399 uncharacterized LOC116888399 X 53580052 53581512 + 116888399 MODEL JAAIVD010000014;XR_004386306 ncrna 626007197 LOC116887053 MICOS complex subunit Mic10-like 1 35897281 35897811 - 22301074;30032202 116887053 MODEL JAAIVD010000025;XM_032888547 XP_032744438 protein-coding 626007202 Mroh2b maestro heat like repeat family member 2B INVOLVED IN protein kinase A signaling (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) 3 175346388 175404575 - 30032202 116895632 MODEL JAAIVD010000012;XM_032896840 XP_032752731 maestro heat-like repeat-containing protein family member 2B protein-coding 626007247 Nadk2 NAD kinase 2, mitochondrial ENCODES a protein that exhibits NAD+ kinase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN NAD+ metabolic process (ortholog); NADP+ biosynthetic process (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH 2,4-Dienoyl-CoA Reductase Deficiency (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 171474876 171516495 - 22301074;30032202 116897135 MODEL JAAIVD010000012;XM_032898799;XM_032898800 XP_032754690;XP_032754691 protein-coding 626007268 Lrrk2 leucine rich repeat kinase 2 ENCODES a protein that exhibits actin binding (ortholog); beta-catenin destruction complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cellular response to curcumin (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease 3 (ortholog); amyotrophic lateral sclerosis (ortholog); cancer (ortholog); FOUND IN amphisome (ortholog); autolysosome (ortholog); axon (ortholog) 1 264675712 264820383 + 22301074 116884205 MODEL JAAIVD010000025;XM_032885325 XP_032741216 leucine-rich repeat serine/threonine-protein kinase 2 protein-coding 626007323 LOC116913844 60S ribosomal protein L37a-like 12 49067221 49068450 + 116913844 MODEL JAAIVD010000007 pseudo 626007324 Kat14 lysine acetyltransferase 14 ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN ATAC complex (ortholog); nucleus (ortholog) 5 124014172 124050507 + 22301074 116902043 MODEL JAAIVD010000023;XM_032904328 XP_032760219 cysteine-rich protein 2-binding protein protein-coding 626007338 Ncor2 nuclear receptor corepressor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cerebellum development (ortholog); epidermis development (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered androgen signaling pathway; androgen signaling pathway; ASSOCIATED WITH breast cancer (ortholog); endometrial carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); histone deacetylase complex (ortholog); nuclear body (ortholog) 16 28796526 28904844 + 30032202 116885937 MODEL JAAIVD010000004;XM_032887252 XP_032743143 protein-coding 626007390 Vrk2 VRK serine/threonine kinase 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); protein autophosphorylation (ortholog); regulation of interleukin-1-mediated signaling pathway (ortholog); ASSOCIATED WITH Fanconi anemia complementation group A (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 11 91288926 91406991 - 22301074;30032202 116912387 MODEL JAAIVD010000006;XM_032916446 XP_032772337 serine/threonine-protein kinase VRK2 protein-coding 626007407 Mrc2 mannose receptor C type 2 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN collagen catabolic process (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog) 9 73740833 73801911 - 30032202 116909881 MODEL JAAIVD010000002;XM_032913619 XP_032769510 C-type mannose receptor 2 protein-coding 626007440 Nfyc nuclear transcription factor Y subunit gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered p53 signaling pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 36174774 36242818 + 22301074;30032202 116897264 MODEL JAAIVD010000025;XM_032899001;XM_032899007 XP_032754892;XP_032754898 protein-coding 626007457 LOC116909575 olfactory receptor 2T29-like 9 39539041 39539994 + 22301074 116909575 MODEL JAAIVD010000002;XM_032913195 XP_032769086 protein-coding 626007461 LOC116900269 olfactory receptor 5M3-like 5 63298356 63299249 + 116900269 MODEL JAAIVD010000023 pseudo 626007462 LOC116889707 5'-3' exonuclease-like 22301074;30032202 116889707 MODEL JAAIVD010000059;XM_032890589 XP_032746480 protein-coding 626007463 LOC116914325 60S ribosomal protein L23-like 13 44658264 44658725 - 116914325 MODEL JAAIVD010000008 pseudo 626007464 LOC116907358 uncharacterized LOC116907358 8 53172821 53175403 - 116907358 MODEL JAAIVD010000027;XR_004388819 ncrna 626007468 Rfc4 replication factor C subunit 4 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); enzyme binding (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); MORIMOTO-RYU-MALICDAN NEUROMUSCULAR SYNDROME (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog); DNA replication factor C complex (ortholog); Elg1 RFC-like complex (ortholog) 4 7904743 7918859 - 22301074;30032202 116898725 MODEL JAAIVD010000003;XM_032900030 XP_032755921 protein-coding 626007482 Prss33 serine protease 33 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 9 1142796 1145131 - 22301074 116910447 MODEL JAAIVD010000002;XM_032914297 XP_032770188 protein-coding 626007492 LOC116904097 villin-1-like 6 133154506 133157016 + 116904097 MODEL JAAIVD010000024 pseudo 626007493 LOC116887260 olfactory receptor 2G3-like 18 10684861 10685826 + 22301074 116887260 MODEL JAAIVD010000013;XM_032888827 XP_032744718 protein-coding 626007496 Hdac1 histone deacetylase 1 ENCODES a protein that exhibits chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); deacetylase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alopecia areata (ortholog); Binge Drinking (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); heterochromatin (ortholog) 1 28609881 28637201 + 22301074 116896123 MODEL JAAIVD010000025;XM_032897095 XP_032752986 protein-coding 626007514 Col12a1 collagen type XII alpha 1 chain INVOLVED IN endodermal cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Bethlem myopathy (ortholog); Bethlem Myopathy 1A (ortholog); Bethlem Myopathy 2 (ortholog); FOUND IN collagen type XII trimer (ortholog) 8 73861569 73978596 - 22301074 116906974 MODEL JAAIVD010000027;XM_032909894 XP_032765785 collagen alpha-1(XII) chain protein-coding 626007584 LOC116913277 polypyrimidine tract-binding protein 1-like 12 86586402 86587337 - 116913277 MODEL JAAIVD010000007 pseudo 626007585 LOC116885073 U4 spliceosomal RNA 15 5717024 5717164 + 116885073 MODEL JAAIVD010000010;XR_004385947 snrna 626007588 LOC116884317 60S ribosomal protein L18-like 1 267440291 267440891 - 116884317 MODEL JAAIVD010000025 pseudo 626007589 Tcf23 transcription factor 23 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN decidualization (ortholog); negative regulation of muscle cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN euchromatin (ortholog) 7 23108080 23112520 - 22301074;30032202 116905826 MODEL JAAIVD010000026;XM_032908793 XP_032764684 protein-coding 626007595 LOC116893234 40S ribosomal protein S2-like 2 120083272 120085985 - 22301074;30032202 116893234 MODEL JAAIVD010000001;XM_032895107 XP_032750998 protein-coding 626007600 LOC116907649 microtubule-associated protein 4-like 8 100654961 100685168 + 30032202 116907649 MODEL JAAIVD010000027;XM_032910725;XM_032910726;XM_032910727;XM_032910728;XM_032910729;XM_032910730;XM_032910731;XM_032910732;XM_032910734;XM_032910735;XM_032910736;XM_032910737;XM_032910738 XP_032766616;XP_032766617;XP_032766618;XP_032766619;XP_032766620;XP_032766621;XP_032766622;XP_032766623;XP_032766625;XP_032766626;XP_032766627;XP_032766628;XP_032766629 protein-coding 626007650 Tafa4 TAFA chemokine like family member 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN macrophage chemotaxis (ortholog); phagocytosis (ortholog); regulation of membrane potential (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog); synaptic vesicle membrane (ortholog) 6 50008993 50165021 + 30032202 116904306 MODEL JAAIVD010000024;XM_032907222 XP_032763113 chemokine-like protein TAFA-4 protein-coding 626007658 Il13ra2 interleukin 13 receptor subunit alpha 2 ENCODES a protein that exhibits cytokine receptor activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-13-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); plasma membrane (ortholog) X 98167999 98229291 - 22301074;30032202 116889095 MODEL JAAIVD010000014;XM_032890265;XM_032890266 XP_032746156;XP_032746157 interleukin-13 receptor subunit alpha-2 protein-coding 626007680 LOC116909038 spindle and kinetochore-associated protein 2-like 9 6316145 6316843 - 116909038 MODEL JAAIVD010000002 pseudo 626007681 Srsf6 serine and arginine rich splicing factor 6 ENCODES a protein that exhibits pre-mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA splice site recognition (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); Epidermal Hyperplasia (ortholog); FOUND IN nuclear speck (ortholog) 5 155043649 155048999 - 30032202 116902391 MODEL JAAIVD010000023;XM_032904909 XP_032760800 serine/arginine-rich splicing factor 6 protein-coding 626007691 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48725063 48725135 - 116910782 MODEL JAAIVD010000002 trna 626007692 Lrsam1 leucine rich repeat and sterile alpha motif containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of endocytosis (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of xenophagy (ortholog); ASSOCIATED WITH autosomal recessive axonal Charcot-Marie-Tooth disease with vocal cord paresis (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2P (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 5 2668869 2707529 + 22301074 116901129 MODEL JAAIVD010000023;XM_032902721 XP_032758612 E3 ubiquitin-protein ligase LRSAM1 protein-coding 626007722 LOC116891022 keratin, ultra high-sulfur matrix protein-like 2 7328019 7329480 + 116891022 MODEL JAAIVD010000001;XM_032891702 XP_032747593 protein-coding 626007726 LOC116890488 U11 spliceosomal RNA 1 25978387 25978520 + 116890488 MODEL JAAIVD010000025;XR_004386675 snrna 626007729 Hdhd2 haloacid dehalogenase like hydrolase domain containing 2 ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH Weight Gain (ortholog) 15 55089939 55120969 - 22301074;30032202 116884468 MODEL JAAIVD010000010;XM_032885578 XP_032741469 haloacid dehalogenase-like hydrolase domain-containing protein 2 protein-coding 626007740 Scgb3a2 secretoglobin family 3A member 2 ASSOCIATED WITH allergic rhinitis (ortholog); Lung Neoplasms (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN extracellular region (ortholog) 15 23978703 23981753 - 22301074;30032202 116884976 MODEL JAAIVD010000010;XM_032886197 XP_032742088 protein-coding 626007747 LOC116906951 olfactory receptor 150 8 82585151 82586089 + 22301074;30032202 116906951 MODEL JAAIVD010000027;XM_032909872 XP_032765763 protein-coding 626007750 Tlr1 toll like receptor 1 ENCODES a protein that exhibits identical protein binding (ortholog); lipopeptide binding (ortholog); Toll-like receptor 2 binding (ortholog); INVOLVED IN cellular response to triacyl bacterial lipopeptide (ortholog); defense response (ortholog); detection of triacyl bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH aspergillosis (ortholog); asthma (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); membrane raft (ortholog); receptor complex (ortholog) 11 21935869 21938497 - 22301074;30032202 116912544 MODEL JAAIVD010000006;XM_032916646 XP_032772537 toll-like receptor 1 protein-coding 626007755 LOC116885056 small nucleolar RNA SNORA17 15 52609136 52609256 + 116885056 MODEL JAAIVD010000010 pseudo 626007756 Dda1 DET1 and DDB1 associated 1 INVOLVED IN protein polyubiquitination (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 13 13510704 13518601 - 30032202 116915102 MODEL JAAIVD010000008;XM_032919532 XP_032775423 DET1- and DDB1-associated protein 1 protein-coding 626007765 Glb1l3 galactosidase beta 1 like 3 8 22584541 22628034 - 22301074;30032202 116907393 MODEL JAAIVD010000027;XM_032910346 XP_032766237 beta-galactosidase-1-like protein 3 protein-coding 626007789 LOC116909731 olfactory receptor 4D2-like 9 82905304 82906239 + 22301074 116909731 MODEL JAAIVD010000002;XM_032913407 XP_032769298 protein-coding 626007792 LOC116887212 activin receptor type-1B-like 18 33559068 33561354 - 22301074;30032202 116887212 MODEL JAAIVD010000013;XM_032888774 XP_032744665 protein-coding 626007798 Cfap300 cilia and flagella associated protein 300 ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia 38 (ortholog); visceral heterotaxy (ortholog) 8 4214559 4231808 - 116907774 MODEL JAAIVD010000027;XM_032910916;XM_032910917 XP_032766807;XP_032766808 cilia- and flagella-associated protein 300 protein-coding 626007811 Uba2 ubiquitin like modifier activating enzyme 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN positive regulation of protein sumoylation (ortholog); protein sumoylation (ortholog); ASSOCIATED WITH ACCES Syndrome (ortholog); chromosome 19q13.11 deletion syndrome (ortholog); genetic disease (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); SUMO activating enzyme complex (ortholog) 2 164509160 164536642 + 22301074;30032202 116892285 MODEL JAAIVD010000001;XM_032893881;XM_032893882 XP_032749772;XP_032749773 SUMO-activating enzyme subunit 2 protein-coding 626007838 Rasgrf2 Ras protein specific guanine nucleotide releasing factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); postsynapse (ortholog) 3 204129552 204342718 + 22301074 116896059 MODEL JAAIVD010000012;XM_032897050 XP_032752941 ras-specific guanine nucleotide-releasing factor 2 protein-coding 626007863 Ppef1 protein phosphatase with EF-hand domain 1 X 31976598 32070877 - 22301074;30032202 116888302 MODEL JAAIVD010000014;XM_032889576 XP_032745467 serine/threonine-protein phosphatase with EF-hands 1 protein-coding 626007884 Arhgap24 Rho GTPase activating protein 24 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN negative regulation of Rac protein signal transduction (ortholog); negative regulation of ruffle assembly (ortholog); wound healing, spreading of epidermal cells (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); focal segmental glomerulosclerosis 1 (ortholog); nephrotic syndrome (ortholog); FOUND IN focal adhesion (ortholog) 11 12799803 13012550 + 22301074;30032202 116912292 MODEL JAAIVD010000006;XM_032916295;XM_032916296 XP_032772186;XP_032772187 rho GTPase-activating protein 24 protein-coding 626007899 Atxn7l2 ataxin 7 like 2 3 50047392 50054766 + 116896368 MODEL JAAIVD010000012;XM_032897485;XM_032897486 XP_032753376;XP_032753377 ataxin-7-like protein 2 protein-coding 626007915 LOC116895248 olfactory receptor 8D1-like 3 66412 67338 - 22301074;30032202 116895248 MODEL JAAIVD010000012;XM_032896568 XP_032752459 protein-coding 626007918 Fcf1 FCF1 rRNA-processing protein INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN small-subunit processome (ortholog) 7 99078916 99091024 + 22301074;30032202 116905281 MODEL JAAIVD010000026;XM_032908143 XP_032764034 rRNA-processing protein FCF1 homolog protein-coding 626007930 LOC116897726 H/ACA ribonucleoprotein complex subunit 3-like 1 90064947 90065154 + 116897726 MODEL JAAIVD010000025 pseudo 626007931 Dnali1 dynein axonemal light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN sperm flagellum assembly (ortholog); ASSOCIATED WITH spermatogenic failure 83 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); ciliary base (ortholog) 1 33235552 33245645 + 30032202 116896816 MODEL JAAIVD010000025;XM_032898295 XP_032754186 axonemal dynein light intermediate polypeptide 1 protein-coding 626007941 LOC116911718 FERM domain-containing protein 3-like 10 76762898 76764652 + 116911718 MODEL JAAIVD010000005 pseudo 626007942 Jazf1 JAZF zinc finger 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Endometrial Neoplasms (ortholog); Prostatic Neoplasms (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 6 87997780 88298307 + 30032202 116903781 MODEL JAAIVD010000024;XM_032906471;XM_032906472;XM_032906473 XP_032762362;XP_032762363;XP_032762364 juxtaposed with another zinc finger protein 1 protein-coding 626007957 Lactb2 lactamase beta 2 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); single-stranded RNA binding (ortholog); zinc ion binding (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 148255983 148283803 - 30032202 116903994 MODEL JAAIVD010000025;XM_032906803 XP_032762694 endoribonuclease LACTB2 protein-coding 626007968 LOC116907631 putative olfactory receptor 10D4 8 82414478 82415425 + 22301074 116907631 MODEL JAAIVD010000027;XM_032910692 XP_032766583 protein-coding 626007972 LOC116905764 60S ribosomal protein L36a-like 7 86482742 86483171 - 22301074;30032202 116905764 MODEL JAAIVD010000026;XM_032908731 XP_032764622 protein-coding 626007977 Ripply2 ripply transcriptional repressor 2 INVOLVED IN axis specification (ortholog); bone morphogenesis (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH spondylocostal dysostosis (ortholog); spondylocostal dysostosis 6 (ortholog); Spondylocostal Dysostosis, Autosomal Recessive (ortholog) 8 81049099 81053602 + 30032202 116906835 MODEL JAAIVD010000027;XM_032909722 XP_032765613 protein ripply2 protein-coding 626007985 Ralb RAS like proto-oncogene B ENCODES a protein that exhibits ATPase binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN positive regulation of autophagosome assembly (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of innate immune response (ortholog); ASSOCIATED WITH pancreatic adenocarcinoma (ortholog); FOUND IN midbody (ortholog); plasma membrane (ortholog) 10 12051376 12089222 - 22301074;30032202 116911298 MODEL JAAIVD010000005;XM_032915209 XP_032771100 ras-related protein Ral-B protein-coding 626007994 Catsperh catsper channel auxiliary subunit eta FOUND IN CatSper complex (ortholog) 2 1608559 1609248 - 116890677 MODEL JAAIVD010000001;XM_032891085 XP_032746976 Tmem262 transmembrane protein 262 protein-coding 626008000 Prkaa1 protein kinase AMP-activated catalytic subunit alpha 1 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); CAMKK-AMPK signaling cascade (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); chromatin (ortholog) 3 175143391 175180402 - 22301074;30032202 116897152 MODEL JAAIVD010000012;XM_032898820;XM_032898821 XP_032754711;XP_032754712 5'-AMP-activated protein kinase catalytic subunit alpha-1 protein-coding 626008016 LOC116895944 ribosome biogenesis regulatory protein homolog 3 134225539 134226755 - 116895944 MODEL JAAIVD010000012 pseudo 626008017 Rrm2b ribonucleotide reductase regulatory TP53 inducible subunit M2B ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); deoxyribonucleoside triphosphate metabolic process (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway; ASSOCIATED WITH autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 5 (ortholog); Camptocormia (ortholog); chronic progressive external ophthalmoplegia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 211386405 211413044 - 22301074;30032202 116910718 MODEL JAAIVD010000025;XM_032914585 XP_032770476 ribonucleoside-diphosphate reductase subunit M2 B protein-coding 626008030 Ctsa cathepsin A ENCODES a protein that exhibits serine-type carboxypeptidase activity (ortholog); INVOLVED IN negative regulation of chaperone-mediated autophagy (ortholog); proteolysis (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH galactosialidosis (ortholog); genetic disease (ortholog); Hydrops Fetalis (ortholog) 5 153119995 153125799 - 22301074;30032202 116902344 MODEL JAAIVD010000023;XM_032904827 XP_032760718 lysosomal protective protein protein-coding 626008049 LOC116887803 60S ribosomal protein L7-like X 56706704 56707351 - 22301074;30032202 116887803 MODEL JAAIVD010000014;XM_032889329 XP_032745220 protein-coding 626008054 LOC116908369 small nucleolar RNA SNORA61 8 47631971 47632099 + 116908369 MODEL JAAIVD010000027;XR_004388918 snorna 626008057 LOC116900620 60S ribosomal protein L9-like 5 106235503 106236073 - 116900620 MODEL JAAIVD010000023 pseudo 626008058 Muc5ac mucin 5AC, oligomeric mucus/gel-forming INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); angle-closure glaucoma (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog); mucus layer (ortholog) 2 7708428 7737212 - 22301074;30032202 116890855 MODEL JAAIVD010000001;XM_032891419 XP_032747310 mucin-5AC protein-coding 626008110 Zdhhc13 zDHHC palmitoyltransferase 13 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); palmitoyltransferase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH alopecia (ortholog); amyloidosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 2 151024860 151056855 - 22301074;30032202 116892075 MODEL JAAIVD010000001;XM_032893548;XM_032893549 XP_032749439;XP_032749440 palmitoyltransferase ZDHHC13;zinc finger DHHC-type palmitoyltransferase 13 protein-coding 626008134 LOC116890388 U6 spliceosomal RNA 1 13290992 13291098 - 116890388 MODEL JAAIVD010000025;XR_004386594 snrna 626008137 Slc30a6 solute carrier family 30 member 6 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN Golgi to endosome transport (ortholog); regulation of zinc ion transport (ortholog); zinc ion import into Golgi lumen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN Golgi apparatus (ortholog); trans-Golgi network membrane (ortholog) 7 18826849 18845569 - 22301074 116905934 MODEL JAAIVD010000026;XM_032908924 XP_032764815 zinc transporter 6 protein-coding 626008153 LOC116902059 glyceraldehyde-3-phosphate dehydrogenase-like 1 127145330 127145963 - 116902059 MODEL JAAIVD010000025 pseudo 626008154 LOC116899796 U7 small nuclear RNA 4 131304162 131304217 + 116899796 MODEL JAAIVD010000003 pseudo 626008155 LOC116883899 histone H2B type 1-H-like 14 42593882 42594389 - 116883899 MODEL JAAIVD010000009 pseudo 626008156 Slc25a48 solute carrier family 25 member 48 14 81596264 81633716 - 22301074;30032202 116883614 MODEL JAAIVD010000009;XM_032884804 XP_032740695 protein-coding 626008167 Vrk1 VRK serine/threonine kinase 1 ENCODES a protein that exhibits histone binding (ortholog); histone H2AX kinase activity (ortholog); histone H3S10 kinase activity (ortholog); INVOLVED IN Cajal body organization (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 10 (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Cajal body (ortholog); chromatin (ortholog); cytosol (ortholog) 7 123660493 123723762 + 22301074;30032202 116905443 MODEL JAAIVD010000026;XM_032908387;XM_032908388;XM_032908389;XM_032908390;XM_032908391;XM_032908393 XP_032764278;XP_032764279;XP_032764280;XP_032764281;XP_032764282;XP_032764284 serine/threonine-protein kinase VRK1 protein-coding 626008200 LOC116912864 alkaline ceramidase 3-like 11 38969895 38970628 + 116912864 MODEL JAAIVD010000006 pseudo 626008201 Gpr137 G protein-coupled receptor 137 FOUND IN lysosomal membrane (ortholog) 2 854270 857494 + 30032202 116894815 MODEL JAAIVD010000001;XM_032896484;XR_004387043 XP_032752375 integral membrane protein GPR137 protein-coding 626008214 Scamp1 secretory carrier membrane protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN endocytosis (ortholog); establishment of localization in cell (ortholog); exocytosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic vesicle membrane (ortholog); membrane (ortholog) 3 202060470 202140573 + 22301074;30032202 116896054 MODEL JAAIVD010000012;XM_032897048 XP_032752939 secretory carrier-associated membrane protein 1 protein-coding 626008228 Palmd palmdelphin ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic spine (ortholog) 3 42765977 42817618 + 22301074;30032202 116896322 MODEL JAAIVD010000012;XM_032897417 XP_032753308 protein-coding 626008240 LOC116910890 glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like 10 40682712 40684950 - 116910890 MODEL JAAIVD010000005 pseudo 626008241 Palld palladin, cytoskeletal associated protein ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to hypoxia (ortholog); epithelial cell morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Brain Injuries (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); axon (ortholog) 13 27315739 27532754 + 22301074 116914891 MODEL JAAIVD010000008;XM_032919334;XM_032919335 XP_032775225;XP_032775226 palladin protein-coding 626008267 LOC116888691 E3 ubiquitin-protein ligase RNF138-like X 24356104 24357212 - 116888691 MODEL JAAIVD010000014;XM_032889981 XP_032745872 protein-coding 626008272 Fanca FA complementation group A INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); Fanconi anaemia nuclear complex (ortholog); nucleoplasm (ortholog) 17 42874091 42930708 - 22301074;30032202 116886031 MODEL JAAIVD010000011;XM_032887323 XP_032743214 Fanconi anemia group A protein protein-coding 626008319 Gja3 gap junction protein alpha 3 ENCODES a protein that exhibits gap junction channel activity (ortholog); gap junction hemi-channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN gap junction-mediated intercellular transport (ortholog); response to hydrogen peroxide (ortholog); response to pH (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 1 multiple types (ortholog); cataract 14 multiple types (ortholog); FOUND IN connexin complex (ortholog); gap junction (ortholog); plasma membrane (ortholog) 12 67763183 67787951 + 22301074;30032202 116913804 MODEL JAAIVD010000007;XM_032918110 XP_032774001 gap junction alpha-3 protein protein-coding 626008325 LOC116900276 olfactory receptor 5AL1-like 5 63433326 63434267 - 22301074;30032202 116900276 MODEL JAAIVD010000023;XM_032902029 XP_032757920 protein-coding 626008328 LOC116883687 elongin-B-like 14 74106034 74106435 + 116883687 MODEL JAAIVD010000009 pseudo 626008329 Drg1 developmentally regulated GTP binding protein 1 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN positive regulation of microtubule polymerization (ortholog); regulation of mitotic spindle assembly (ortholog); ASSOCIATED WITH Contracture (ortholog); Neurodevelopmental Disorders (ortholog); TAN-ALMURSHEDI SYNDROME (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 11 72225876 72243365 - 22301074;30032202 116912501 MODEL JAAIVD010000006;XM_032916585 XP_032772476 developmentally-regulated GTP-binding protein 1 protein-coding 626008342 LOC116911424 sterile alpha motif domain-containing protein 12-like 1 227956283 228199149 - 22301074;30032202 116911424 MODEL JAAIVD010000025;XM_032915393;XM_032915401 XP_032771284;XP_032771292 uncharacterized protein LOC116911424 protein-coding 626008355 LOC116894763 protein LSM12 homolog 2 191325908 191326462 - 116894763 MODEL JAAIVD010000001 pseudo 626008356 LOC116888290 coordinator of PRMT5 and differentiation stimulator-like X 48502075 48502579 - 116888290 MODEL JAAIVD010000014 pseudo 626008357 LOC116897318 alpha-enolase-like 1 88812804 88816977 + 116897318 MODEL JAAIVD010000025 pseudo 626008358 Wdr19 WD repeat domain 19 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); digestive system development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 5 (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle A (ortholog); motile cilium (ortholog) 11 22214971 22278062 + 22301074;30032202 116912250 MODEL JAAIVD010000006;XM_032916233 XP_032772124 WD repeat-containing protein 19 protein-coding 626008398 LOC116888597 spermine oxidase-like X 87130210 87132043 + 116888597 MODEL JAAIVD010000014 pseudo 626008399 LOC116908455 U5 spliceosomal RNA 8 59502462 59502577 - 116908455 MODEL JAAIVD010000027;XR_004388973 snrna 626008402 Emc1 ER membrane protein complex subunit 1 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH cerebellar atrophy, visual impairment, and psychomotor retardation (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 18810342 18833884 - 22301074;30032202 116893683 MODEL JAAIVD010000025;XM_032895403;XM_032895411 XP_032751294;XP_032751302 protein-coding 626008431 Dkk3 dickkopf WNT signaling pathway inhibitor 3 INVOLVED IN adrenal gland development (ortholog); negative regulation of aldosterone biosynthetic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); polycystic liver disease (ortholog) 2 89327030 89366524 + 22301074;30032202 116891650 MODEL JAAIVD010000001;XM_032892891;XM_032892892;XM_032892893 XP_032748782;XP_032748783;XP_032748784 dickkopf-related protein 3 protein-coding 626008449 Cmklr1 chemerin chemokine-like receptor 1 ENCODES a protein that exhibits adipokinetic hormone binding (ortholog); adipokinetic hormone receptor activity (ortholog); INVOLVED IN chemotaxis (ortholog); G protein-coupled receptor signaling pathway (ortholog); negative regulation of interleukin-12 production (ortholog); ASSOCIATED WITH granulosa cell tumor (ortholog); pre-eclampsia (ortholog); FOUND IN plasma membrane (ortholog) 16 40361606 40364895 + 22301074;30032202 116885453 MODEL JAAIVD010000004;XM_032886737 XP_032742628 chemokine-like receptor 1 protein-coding 626008455 LOC116890530 small nucleolar RNA SNORA17 1 95979684 95979815 + 116890530 MODEL JAAIVD010000025;XR_004386711 snorna 626008458 LOC116894151 olfactory receptor 2AG1-like 2 104868494 104869444 - 22301074 116894151 MODEL JAAIVD010000001;XM_032895870 XP_032751761 protein-coding 626008461 Rnf220 ring finger protein 220 ENCODES a protein that exhibits beta-catenin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN dorsal/ventral neural tube patterning (ortholog); noradrenergic neuron development (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 23 (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear lamina (ortholog) 1 40884239 41103958 - 22301074;30032202 116898689 MODEL JAAIVD010000025;XM_032899951;XM_032899960;XM_032899970;XM_032899979;XM_032899989;XM_032899999;XM_032900005 XP_032755842;XP_032755851;XP_032755861;XP_032755870;XP_032755880;XP_032755890;XP_032755896 E3 ubiquitin-protein ligase RNF220 protein-coding 626008497 Shld3 shieldin complex subunit 3 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 193190234 193194904 + 30032202 116897231 MODEL JAAIVD010000012;XM_032898955 XP_032754846 protein-coding 626008503 Ift25 intraflagellar transport 25 INVOLVED IN cilium assembly (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH renal agenesis (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); intraciliary transport particle B (ortholog) 1 47530864 47557241 - 30032202 116899282 MODEL JAAIVD010000025;XM_032900917;XM_032900926;XM_032900935;XM_032900944;XM_032900954 XP_032756808;XP_032756817;XP_032756826;XP_032756835;XP_032756845 Hspb11 heat shock protein family B (small) member 11;intraflagellar transport protein 25 homolog protein-coding 626008526 Zbtb12 zinc finger and BTB domain containing 12 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleoplasm (ortholog) 18 7484648 7487521 + 22301074;30032202 116887316 MODEL JAAIVD010000013;XM_032888905 XP_032744796 zinc finger and BTB domain-containing protein 12 protein-coding 626008532 LOC116888128 teneurin-1-like X 104345705 104716979 - 22301074;30032202 116888128 MODEL JAAIVD010000014;XM_032889474 XP_032745365 protein-coding 626008548 Trhr thyrotropin releasing hormone receptor ENCODES a protein that exhibits identical protein binding (ortholog); thyrotropin-releasing hormone receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog); positive regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 7 (ortholog); genetic disease (ortholog); FOUND IN cell surface (ortholog) 1 218624830 218668263 + 22301074;30032202 116911130 MODEL JAAIVD010000025;XM_032914981;XM_032914990 XP_032770872;XP_032770881 thyrotropin-releasing hormone receptor protein-coding 626008557 Tsn translin ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoribonuclease complex (ortholog) 10 10852434 10865687 - 22301074;30032202 116911134 MODEL JAAIVD010000005;XM_032914982;XM_032914983 XP_032770873;XP_032770874 protein-coding 626008571 LOC116915239 zinc finger protein with KRAB and SCAN domains 3 14 41068357 41083977 + 30032202 116915239 MODEL JAAIVD010000009;XM_032919631 XP_032775522 protein-coding 626008581 LOC116885843 CD209 antigen-like protein E 16 2074409 2079744 + 116885843 MODEL JAAIVD010000004;XM_032887182 XP_032743073 protein-coding 626008588 Slc22a23 solute carrier family 22 member 23 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 14 52736239 52904278 - 22301074 116883334 MODEL JAAIVD010000009;XM_032884405;XM_032884406 XP_032740296;XP_032740297 protein-coding 626008606 LOC116905803 splicing factor YJU2-like 7 94626350 94627264 - 116905803 MODEL JAAIVD010000026 pseudo 626008607 LOC116899221 histone-binding protein RBBP4-like 4 89985053 89986277 - 116899221 MODEL JAAIVD010000003 pseudo 626008608 LOC116892875 F-box only protein 6 1 12629967 12635546 + 22301074;30032202 116892875 MODEL JAAIVD010000025;XM_032894785 XP_032750676 protein-coding 626008618 Dock4 dedicator of cytokinesis 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PDZ domain binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); negative regulation of vascular associated smooth muscle contraction (ortholog); positive regulation of vascular associated smooth muscle cell migration (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 7 53659109 54046970 + 22301074;30032202 116904989 MODEL JAAIVD010000026;XM_032907671 XP_032763562 dedicator of cytokinesis protein 4 protein-coding 626008674 Fads2 fatty acid desaturase 2 ENCODES a protein that exhibits acyl-CoA 6-desaturase activity (ortholog); acyl-CoA desaturase activity (ortholog); stearoyl-CoA 9-desaturase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); arachidonate metabolite production involved in inflammatory response (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH bipolar disorder (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 9540801 9579868 - 22301074;30032202 116890943 MODEL JAAIVD010000001;XM_032891586 XP_032747477 acyl-CoA 6-desaturase protein-coding 626008690 LOC116897225 uncharacterized protein C11orf98 homolog 3 192886075 192886604 + 116897225 MODEL JAAIVD010000012 pseudo 626008691 LOC116913188 eukaryotic translation initiation factor 4B-like 12 64738169 64739977 - 116913188 MODEL JAAIVD010000007 pseudo 626008692 Phospho1 phosphoethanolamine/phosphocholine phosphatase 1 ENCODES a protein that exhibits phosphocholine phosphatase activity (ortholog); phosphoethanolamine phosphatase activity (ortholog); pyrophosphatase activity (ortholog); INVOLVED IN bone mineralization (ortholog); bone mineralization involved in bone maturation (ortholog); endochondral ossification (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH Metabolic Bone Diseases (ortholog); FOUND IN extracellular matrix (ortholog); extracellular membrane-bounded organelle (ortholog) 9 58562688 58570047 - 22301074;30032202 116909459 MODEL JAAIVD010000002;XM_032913041;XM_032913042 XP_032768932;XP_032768933 phosphoethanolamine/phosphocholine phosphatase protein-coding 626008702 Tfcp2 transcription factor CP2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 262548422 262591478 + 22301074;30032202 116883996 MODEL JAAIVD010000025;XM_032885233;XM_032885240 XP_032741124;XP_032741131 alpha-globin transcription factor CP2 protein-coding 626008724 LOC116903584 caspase-6-like 6 26917804 26918451 - 116903584 MODEL JAAIVD010000024 pseudo 626008725 LOC116906419 small nucleolar RNA SNORA44 7 86201985 86202114 + 116906419 MODEL JAAIVD010000026;XR_004388681 snorna 626008728 LOC116895843 U1 small nuclear ribonucleoprotein C-like 3 83862729 83866523 + 116895843 MODEL JAAIVD010000012 pseudo 626008729 LOC116894851 U6 spliceosomal RNA 2 115736116 115736219 + 116894851 MODEL JAAIVD010000001;XR_004387066 snrna 626008732 LOC116910112 uncharacterized LOC116910112 9 32244310 32245777 - 116910112 MODEL JAAIVD010000002;XR_004389135 ncrna 626008737 Zmynd10 zinc finger MYND-type containing 10 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); motile cilium assembly (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); centriolar satellite (ortholog); cytoplasm (ortholog) 8 98861963 98867383 + 30032202 116907525 MODEL JAAIVD010000027;XM_032910537;XM_032910538 XP_032766428;XP_032766429 zinc finger MYND domain-containing protein 10 protein-coding 626008757 Vwde von Willebrand factor D and EGF domains ASSOCIATED WITH optic atrophy 12 (ortholog) 6 125477968 125569159 + 22301074;30032202 116904448 MODEL JAAIVD010000024;XM_032907270 XP_032763161 von Willebrand factor D and EGF domain-containing protein protein-coding 626008786 Ebag9 estrogen receptor binding site associated antigen 9 INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); T cell mediated cytotoxicity (ortholog); ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); cervical cancer (ortholog); FOUND IN Golgi apparatus (ortholog); secretory granule (ortholog) 1 219131953 219150239 + 30032202 116911185 MODEL JAAIVD010000025;XM_032915056;XM_032915064 XP_032770947;XP_032770955 receptor-binding cancer antigen expressed on SiSo cells protein-coding 626008800 Tns4 tensin 4 INVOLVED IN intracellular protein localization (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) 9 55354545 55375428 + 22301074 116909688 MODEL JAAIVD010000002;XM_032913349 XP_032769240 tensin-4 protein-coding 626008817 Npdc1 neural proliferation, differentiation and control 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 5 11773683 11779494 - 22301074;30032202 116901302 MODEL JAAIVD010000023;XM_032903099;XM_032903100;XM_032903101;XM_032903102 XP_032758990;XP_032758991;XP_032758992;XP_032758993 neural proliferation differentiation and control protein 1 protein-coding 626008838 Xrn1 5'-3' exoribonuclease 1 ENCODES a protein that exhibits 5'-3' RNA exonuclease activity (ortholog); G-quadruplex DNA binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to cycloheximide (ortholog); cellular response to puromycin (ortholog); histone mRNA catabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Neurodevelopmental Disorders (ortholog); Staphylococcal Infections (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 8 87408054 87508947 + 22301074;30032202 116908245 MODEL JAAIVD010000027;XM_032911501 XP_032767392 protein-coding 626008885 LOC116892943 uncharacterized LOC116892943 2 209858824 209859546 + 116892943 MODEL JAAIVD010000001;XR_004386986 ncrna 626008889 LOC116891180 cartilage acidic protein 1-like 2 41517712 41535657 - 30032202 116891180 MODEL JAAIVD010000001;XM_032891997 XP_032747888 protein-coding 626008895 LOC116894405 keratin-associated protein 7-1 2 157416275 157416893 - 116894405 MODEL JAAIVD010000001;XM_032896112 XP_032752003 protein-coding 626008900 Fbxo15 F-box protein 15 FOUND IN SCF ubiquitin ligase complex (ortholog) 15 47176099 47404736 - 22301074 116884573 MODEL JAAIVD010000010;XM_032885716;XR_004385882;XR_004385883;XR_004385884 XP_032741607 F-box only protein 15 protein-coding 626008923 LOC116888043 40S ribosomal protein S24-like 1 65562878 65563278 - 116888043 MODEL JAAIVD010000025 pseudo 626008924 LOC116893586 60S ribosomal protein L23a-like 2 229465718 229466276 + 116893586 MODEL JAAIVD010000001 pseudo 626008925 LOC116912044 E3 ubiquitin-protein ligase RNF115-like 11 83537273 83538364 + 116912044 MODEL JAAIVD010000006 pseudo 626008926 LOC116889428 eukaryotic translation elongation factor 1 epsilon-1-like 1 136657607 136658129 - 116889428 MODEL JAAIVD010000025 pseudo 626008927 LOC116914058 60S ribosomal protein L21-like 12 2316807 2317256 - 22301074;30032202 116914058 MODEL JAAIVD010000007;XM_032918345 XP_032774236 protein-coding 626008931 LOC116885025 small nucleolar RNA SNORA19 15 61510451 61510582 + 116885025 MODEL JAAIVD010000010;XR_004385914 snorna 626008934 LOC116909989 60S ribosomal protein L7-like 9 92592041 92592787 - 22301074;30032202 116909989 MODEL JAAIVD010000002;XM_032913771 XP_032769662 protein-coding 626008937 LOC116906083 ceramide synthase 5-like 7 65791442 65792534 + 116906083 MODEL JAAIVD010000026 pseudo 626008938 Fzd3 frizzled class receptor 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in midbrain (ortholog); commissural neuron axon guidance (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); cerebellar hypoplasia (ortholog); colorectal cancer (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); axon (ortholog) 12 59169132 59235828 + 30032202 116913123 MODEL JAAIVD010000007;XM_032917279;XM_032917280 XP_032773170;XP_032773171 frizzled-3 protein-coding 626008952 LOC116894566 NACHT, LRR and PYD domains-containing protein 4A-like 2 178627989 178683540 - 22301074;30032202 116894566 MODEL JAAIVD010000001;XM_032896279;XM_032896280 XP_032752170;XP_032752171 protein-coding 626008970 Fut1 fucosyltransferase 1 (H blood group) ENCODES a protein that exhibits alpha-(1,2)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); galactoside 2-alpha-L-fucosyltransferase activity (ortholog); INVOLVED IN glycolipid metabolic process (ortholog); glycoprotein biosynthetic process (ortholog); olfactory bulb development (ortholog); FOUND IN Golgi apparatus (ortholog) 2 153901454 153903935 - 22301074;30032202 116892139 MODEL JAAIVD010000001;XM_032893628 XP_032749519 galactoside 2-alpha-L-fucosyltransferase 1 protein-coding 626008976 LOC116894011 olfactory receptor 51B4-like 2 101743210 101744131 + 116894011 MODEL JAAIVD010000001 pseudo 626008977 LOC116895266 small proline-rich protein 3-like 3 1615974 1617049 + 116895266 MODEL JAAIVD010000012;XM_032896583 XP_032752474 protein-coding 626008981 LOC116900795 ATP synthase subunit f, mitochondrial-like 5 157748533 157748841 + 30032202 116900795 MODEL JAAIVD010000023;XM_032902506 XP_032758397 protein-coding 626008985 LOC116885096 U7 small nuclear RNA 15 57829340 57829404 - 116885096 MODEL JAAIVD010000010;XR_004385963 snrna 626008988 LOC116898320 transcription elongation factor A protein-like 9 4 40976628 40978109 + 116898320 MODEL JAAIVD010000003 pseudo 626008989 LOC116894856 U6 spliceosomal RNA 2 39016033 39016135 - 116894856 MODEL JAAIVD010000001;XR_004387070 snrna 626008992 LOC116899406 cytochrome P450 20A1 4 132316820 132358190 - 22301074;30032202 116899406 MODEL JAAIVD010000003;XM_032901142;XM_032901143 XP_032757033;XP_032757034 protein-coding 626009011 Itsn2 intersectin 2 INVOLVED IN cell-cell signaling (ortholog); endocytosis (ortholog); positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Landau-Kleffner syndrome (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog) 7 25263153 25371844 + 22301074;30032202 116906281 MODEL JAAIVD010000026;XM_032909166 XP_032765057 intersectin-2 protein-coding 626009055 LOC116885024 small nucleolar RNA SNORA21 15 12393486 12393620 + 116885024 MODEL JAAIVD010000010;XR_004385913 snorna 626009058 LOC116900997 uncharacterized LOC116900997 5 109658935 109661640 - 116900997 MODEL JAAIVD010000023 pseudo 626009059 Chd7 chromodomain helicase DNA binding protein 7 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN adult heart development (ortholog); adult walking behavior (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH 3MC syndrome (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XY complete gonadal dysgenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 134665719 134844926 - 22301074 116903523 MODEL JAAIVD010000025;XM_032906136 XP_032762027 chromodomain-helicase-DNA-binding protein 7 protein-coding 626009103 LOC116910344 E3 ubiquitin ligase Rnf157 9 67697499 67733634 + 30032202 116910344 MODEL JAAIVD010000002;XM_032914200 XP_032770091 protein-coding 626009124 LOC116892498 zinc finger protein 235-like 2 170465077 170471112 - 30032202 116892498 MODEL JAAIVD010000001;XM_032894244;XM_032894245 XP_032750135;XP_032750136 protein-coding 626009133 LOC116893729 olfactory receptor 9I1-like 2 13834380 13839813 + 22301074;30032202 116893729 MODEL JAAIVD010000001;XM_032895444;XM_032895445 XP_032751335;XP_032751336 protein-coding 626009139 LOC116890173 keratin, type II cytoskeletal 6A-like 1 261411550 261415386 + 22301074;30032202 116890173 MODEL JAAIVD010000025;XM_032890913 XP_032746804 protein-coding 626009150 Calhm3 calcium homeostasis modulator 3 ENCODES a protein that exhibits voltage-gated channel activity (ortholog); voltage-gated monoatomic ion channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); protein heterooligomerization (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 2 46685149 46690868 - 30032202 116893817 MODEL JAAIVD010000001;XM_032895531 XP_032751422 calcium homeostasis modulator protein 3 protein-coding 626009156 LOC116883753 uncharacterized LOC116883753 14 63131893 63141583 + 116883753 MODEL JAAIVD010000009;XR_004385782 ncrna 626009161 LOC116889854 uncharacterized LOC116889854 1 153000353 153000870 - 116889854 MODEL JAAIVD010000025;XM_032890682 XP_032746573 uncharacterized protein LOC116889854 protein-coding 626009166 Rpf2 ribosome production factor 2 homolog ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN protein localization to nucleolus (ortholog); regulation of signal transduction by p53 class mediator (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 40001069 40022519 - 22301074;30032202 116887122 MODEL JAAIVD010000013;XM_032888670 XP_032744561 protein-coding 626009180 Col4a3 collagen type IV alpha 3 chain ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); endothelial cell apoptotic process (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Alport syndrome (ortholog); autosomal dominant Alport syndrome (ortholog); autosomal recessive Alport syndrome (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog); endoplasmic reticulum (ortholog) 4 155450358 155578260 + 22301074;30032202 116899564 MODEL JAAIVD010000003;XM_032901461 XP_032757352 collagen alpha-3(IV) chain protein-coding 626009236 LOC116893094 protein FAM111A-like 2 61154685 61161196 - 116893094 MODEL JAAIVD010000001;XM_032895038 XP_032750929 protein-coding 626009242 Itih3 inter-alpha-trypsin inhibitor heavy chain 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 13 6611989 6626242 - 22301074 116914276 MODEL JAAIVD010000008;XM_032918499 XP_032774390 inter-alpha-trypsin inhibitor heavy chain H3 protein-coding 626009267 Dlg1 discs large MAGUK scaffold protein 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); kinase binding (ortholog); kinesin binding (ortholog); INVOLVED IN actin filament organization (ortholog); amyloid precursor protein metabolic process (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cervix uteri carcinoma in situ (ortholog); cleft palate (ortholog); invasive ductal carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); basement membrane (ortholog); basolateral plasma membrane (ortholog) 4 16523734 16712115 + 22301074;30032202 116898757 MODEL JAAIVD010000003;XM_032900076 XP_032755967 disks large homolog 1 protein-coding 626009297 Adamts7 ADAM metallopeptidase with thrombospondin type 1 motif 7 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Coronary Disease (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog) 12 5403445 5417619 + 22301074;30032202 116913065 MODEL JAAIVD010000007;XM_032917193 XP_032773084 A disintegrin and metalloproteinase with thrombospondin motifs 7 protein-coding 626009315 LOC116912675 TBC1 domain family member 1-like 11 12294652 12300702 + 116912675 MODEL JAAIVD010000006 pseudo 626009316 LOC116909060 60S ribosomal protein L36a-like 9 63303888 63304232 + 22301074;30032202 116909060 MODEL JAAIVD010000002;XM_032912538 XP_032768429 protein-coding 626009319 LOC116890333 U6 spliceosomal RNA 1 69903468 69903574 + 116890333 MODEL JAAIVD010000025;XR_004386556 snrna 626009322 Scaf11 SR-related CTD associated factor 11 INVOLVED IN RNA splicing (ortholog); RNA splicing, via transesterification reactions (ortholog); spliceosomal complex assembly (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 269254162 269306082 - 30032202 116884428 MODEL JAAIVD010000025;XM_032885519;XM_032885526 XP_032741410;XP_032741417 protein SCAF11 protein-coding 626009345 Klhl2 kelch like family member 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); FOUND IN actin cytoskeleton (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 13 24266849 24379634 + 22301074 116915077 MODEL JAAIVD010000008;XM_032919496 XP_032775387 kelch-like protein 2 protein-coding 626009364 LOC116913643 centrosomal protein of 290 kDa-like 1 178880280 178908595 + 30032202 116913643 MODEL JAAIVD010000025;XM_032917952 XP_032773843 protein-coding 626009386 LOC116904660 U1 spliceosomal RNA 6 53745804 53745967 - 116904660 MODEL JAAIVD010000024;XR_004388360 snrna 626009389 Znf672 zinc finger protein 672 FOUND IN nucleoplasm (ortholog) 9 39903451 39919108 + 30032202 116908527 MODEL JAAIVD010000002;XM_032911707;XM_032911708;XM_032911709;XM_032911710 XP_032767598;XP_032767599;XP_032767600;XP_032767601 protein-coding 626009406 LOC116896118 small proline-rich protein 2I-like 3 825351 825569 - 22301074 116896118 MODEL JAAIVD010000012;XM_032897082 XP_032752973 protein-coding 626009409 LOC116902883 anionic trypsin-2-like 6 99229058 99232539 + 22301074;30032202 116902883 MODEL JAAIVD010000024;XM_032905215 XP_032761106 protein-coding 626009416 LOC116896824 40S ribosomal protein S6-like 3 91234818 91235461 - 116896824 MODEL JAAIVD010000012 pseudo 626009417 LOC116888060 presenilins-associated rhomboid-like protein, mitochondrial X 88316135 88317525 - 116888060 MODEL JAAIVD010000014 pseudo 626009418 Cartpt CART prepropeptide INVOLVED IN adult feeding behavior (ortholog); behavioral response to cocaine (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) 3 196704124 196706379 + 22301074;30032202 116895670 MODEL JAAIVD010000012;XM_032896873 XP_032752764 cocaine- and amphetamine-regulated transcript protein protein-coding 626009424 LOC116894049 olfactory receptor 51E1 2 102658054 102659007 + 22301074 116894049 MODEL JAAIVD010000001;XM_032895770 XP_032751661 protein-coding 626009427 Stard8 StAR related lipid transfer domain containing 8 ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog) X 57034084 57072301 + 22301074;30032202 116889015 MODEL JAAIVD010000014;XM_032890223 XP_032746114 stAR-related lipid transfer protein 8 protein-coding 626009445 LOC116904432 translationally-controlled tumor protein-like 6 116549008 116549532 + 116904432 MODEL JAAIVD010000024 pseudo 626009446 Crtc2 CREB regulated transcription coactivator 2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN gluconeogenesis (ortholog); glucose homeostasis (ortholog); positive regulation of CREB transcription factor activity (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 63377196 63386992 - 22301074;30032202 116896610 MODEL JAAIVD010000012;XM_032897865;XM_032897866;XM_032897867;XM_032897868;XR_004387347;XR_004387348 XP_032753756;XP_032753757;XP_032753758;XP_032753759 CREB-regulated transcription coactivator 2 protein-coding 626009480 Clstn2 calsyntenin 2 INVOLVED IN associative learning (ortholog); inhibitory synapse assembly (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 8 88862050 88994029 - 30032202 116907098 MODEL JAAIVD010000027;XM_032910066 XP_032765957 calsyntenin-2 protein-coding 626009497 LOC116889949 olfactory receptor 6C76-like 1 161557277 161558191 - 116889949 MODEL JAAIVD010000025 pseudo 626009498 S1pr2 sphingosine-1-phosphate receptor 2 ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); filopodium assembly (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness 68 (ortholog); Experimental Diabetes Mellitus (ortholog); Fibrosis (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynapse (ortholog) 8 17229317 17240197 - 22301074;30032202 116907846 MODEL JAAIVD010000027;XM_032911034 XP_032766925 sphingosine 1-phosphate receptor 2 protein-coding 626009504 LOC116907716 olfactory receptor 149-like 8 82187453 82188388 + 22301074 116907716 MODEL JAAIVD010000027;XM_032910842 XP_032766733 protein-coding 626009507 LOC116899813 small nucleolar RNA SNORD82 4 158490890 158490961 - 116899813 MODEL JAAIVD010000003;XR_004387813 snorna 626009510 Krt39 keratin 39 9 54344727 54351333 - 22301074;30032202 116909350 MODEL JAAIVD010000002;XM_032912899 XP_032768790 keratin, type I cytoskeletal 39 protein-coding 626009519 LOC116905382 serine protease inhibitor A3K-like 7 115382412 115387517 + 30032202 116905382 MODEL JAAIVD010000026;XM_032908320 XP_032764211 protein-coding 626009525 Znf605 zinc finger protein 605 16 44222197 44253605 - 30032202 116885159 MODEL JAAIVD010000004;XM_032886365;XM_032886366;XM_032886367;XM_032886368;XM_032886369;XM_032886370;XR_004385983;XR_004385984 XP_032742256;XP_032742257;XP_032742258;XP_032742259;XP_032742260;XP_032742261 protein-coding 626009551 LOC116889329 testis-expressed protein 11-like X 58614229 58632468 + 30032202 116889329 MODEL JAAIVD010000014;XM_032890447 XP_032746338 protein-coding 626009558 Trnas-cga transfer RNA serine (anticodon CGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48710298 48710379 + 116910804 MODEL JAAIVD010000002 trna 626009559 LOC116894464 60S ribosomal protein L27-like 2 166810267 166810660 + 116894464 MODEL JAAIVD010000001 pseudo 626009560 LOC116893725 olfactory receptor 9Q2 2 13760955 13761899 - 22301074;30032202 116893725 MODEL JAAIVD010000001;XM_032895438 XP_032751329 protein-coding 626009563 Ano10 anoctamin 10 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 10 (ortholog); FOUND IN cilium (ortholog); plasma membrane (ortholog) 8 113339853 113456827 - 30032202 116907994 MODEL JAAIVD010000027;XM_032911246;XM_032911247 XP_032767137;XP_032767138 anoctamin-10 protein-coding 626009583 LOC116889964 40S ribosomal protein S8-like 1 162002495 162006736 + 116889964 MODEL JAAIVD010000025 pseudo 626009584 Angptl4 angiopoietin like 4 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); identical protein binding (ortholog); lipase binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); PARTICIPATES IN lipid metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); carcinoma (ortholog); coronary artery disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 1 158635220 158641639 + 30032202 116907028 MODEL JAAIVD010000025;XM_032909975 XP_032765866 angiopoietin-related protein 4 protein-coding 626009595 Tbc1d23 TBC1 domain family member 23 INVOLVED IN brain development (ortholog); embryonic brain development (ortholog); neuron projection development (ortholog); ASSOCIATED WITH genetic disease (ortholog); pontocerebellar hypoplasia (ortholog); pontocerebellar hypoplasia type 11 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 4 41282536 41338318 - 30032202 116898909 MODEL JAAIVD010000003;XM_032900316 XP_032756207 protein-coding 626009618 LOC116886732 small nucleolar RNA SNORA17 17 24889304 24889442 - 116886732 MODEL JAAIVD010000011 pseudo 626009619 Cxcr3 C-X-C motif chemokine receptor 3 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); chemokine binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) X 54493748 54497365 + 22301074;30032202 116887911 MODEL JAAIVD010000014;XM_032889384 XP_032745275 C-X-C chemokine receptor type 3 protein-coding 626009625 LOC116894053 olfactory receptor 51F2-like 2 102724491 102725441 + 22301074 116894053 MODEL JAAIVD010000001;XM_032895775 XP_032751666 protein-coding 626009628 LOC116894204 olfactory receptor 497 2 106358779 106359723 + 22301074;30032202 116894204 MODEL JAAIVD010000001;XM_032895917 XP_032751808 protein-coding 626009631 LOC116902570 small nucleolar RNA SNORA17 5 102175353 102175484 - 116902570 MODEL JAAIVD010000023;XR_004388166 snorna 626009634 LOC116902547 small nucleolar RNA SNORA48 5 6654376 6654520 - 116902547 MODEL JAAIVD010000023;XR_004388148 snorna 626009637 Ppp1r1a protein phosphatase 1 regulatory inhibitor subunit 1A ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN extracellular space (ortholog) 1 259550795 259558151 + 22301074;30032202 116883165 MODEL JAAIVD010000025;XM_032884205;XM_032884210 XP_032740096;XP_032740101 protein phosphatase 1 regulatory subunit 1A protein-coding 626009654 Ccar1 cell division cycle and apoptosis regulator 1 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cell migration (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN nuclear envelope lumen (ortholog) 18 28558555 28599823 - 30032202 116887686 MODEL JAAIVD010000013;XM_032889281 XP_032745172 cell division cycle and apoptosis regulator protein 1 protein-coding 626009681 LOC116893298 GTP-binding nuclear protein Ran-like 2 150905427 150906243 + 116893298 MODEL JAAIVD010000001 pseudo 626009682 LOC116890210 keratin, type II cytoskeletal 6A-like 1 261424114 261427672 + 22301074;30032202 116890210 MODEL JAAIVD010000025;XM_032890947 XP_032746838 protein-coding 626009693 Phgdh phosphoglycerate dehydrogenase ENCODES a protein that exhibits phosphoglycerate dehydrogenase activity (ortholog); INVOLVED IN G1 to G0 transition (ortholog); gamma-aminobutyric acid metabolic process (ortholog); glial cell development (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Breast Neoplasms (ortholog); epilepsy (ortholog) 3 58974152 59001595 + 22301074;30032202 116896480 MODEL JAAIVD010000012;XM_032897645 XP_032753536 D-3-phosphoglycerate dehydrogenase protein-coding 626009709 LOC116900570 olfactory receptor 4F15-like 5 90266057 90266995 + 22301074 116900570 MODEL JAAIVD010000023;XM_032902293 XP_032758184 protein-coding 626009712 Grb2 growth factor receptor bound protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); anatomical structure formation involved in morphogenesis (ortholog); B cell receptor signaling pathway (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH breast cancer (ortholog); endometrial carcinoma (ortholog); prostate adenocarcinoma (ortholog); FOUND IN cell cortex (ortholog); cell-cell junction (ortholog); centrosome (ortholog) 9 68393553 68459670 + 22301074 116908557 MODEL JAAIVD010000002;XM_032911762 XP_032767653 growth factor receptor-bound protein 2 protein-coding 626009722 Sowaha sosondowah ankyrin repeat domain family member A 9 35972577 35975131 - 22301074 116909665 MODEL JAAIVD010000002;XM_032913318 XP_032769209 ankyrin repeat domain-containing protein SOWAHA protein-coding 626009727 Trnap-cgg transfer RNA proline (anticodon CGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 44748769 44748840 - 116911912 MODEL JAAIVD010000005 trna 626009728 LOC116895731 uncharacterized LOC116895731 3 125828794 125830342 + 116895731 MODEL JAAIVD010000012;XR_004387308 ncrna 626009732 LOC116907204 zinc finger protein 709-like 8 18426279 18437284 + 22301074;30032202 116907204 MODEL JAAIVD010000027;XM_032910163 XP_032766054 protein-coding 626009740 LOC116894295 proto-oncogene FRAT1-like 2 137484384 137486985 + 30032202 116894295 MODEL JAAIVD010000001;XM_032896000 XP_032751891 protein-coding 626009745 Ccdc65 coiled-coil domain containing 65 INVOLVED IN cilium assembly (ortholog); regulation of cilium movement (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 27 (ortholog); FOUND IN ciliary basal body (ortholog) 1 271531520 271544499 + 30032202 116884792 MODEL JAAIVD010000025;XM_032886029;XM_032886035;XM_032886040 XP_032741920;XP_032741926;XP_032741931 dynein regulatory complex subunit 2 protein-coding 626009765 Bloc1s5 biogenesis of lysosomal organelles complex 1 subunit 5 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); developmental pigmentation (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); Hermansky-Pudlak Syndrome 11 (ortholog); platelet storage pool deficiency (ortholog); FOUND IN BLOC-1 complex (ortholog); microvesicle (ortholog); transport vesicle (ortholog) 14 57667668 57694895 - 22301074;30032202 116883660 MODEL JAAIVD010000009;XM_032884855;XM_032884856 XP_032740746;XP_032740747 biogenesis of lysosome-related organelles complex 1 subunit 5 protein-coding 626009778 LOC116887943 uncharacterized LOC116887943 X 62281854 62342414 + 116887943 MODEL JAAIVD010000014;XM_032889399 XP_032745290 uncharacterized protein LOC116887943 protein-coding 626009788 Kank4 KN motif and ankyrin repeat domains 4 ASSOCIATED WITH nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 1 55736435 55768320 + 22301074;30032202 116899997 MODEL JAAIVD010000025;XM_032901805 XP_032757696 KN motif and ankyrin repeat domain-containing protein 4 protein-coding 626009801 LOC116887612 interferon-induced transmembrane protein 2-like 1 49477211 49477835 + 30032202 116887612 MODEL JAAIVD010000025;XM_032889223 XP_032745114 protein-coding 626009806 Chi3l1 chitinase 3 like 1 ENCODES a protein that exhibits chitin binding (ortholog); chitinase activity (ortholog); INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); cellular response to interleukin-1 (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); arteriosclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 10 1496222 1504156 - 22301074;30032202 116911489 MODEL JAAIVD010000005;XM_032915471;XM_032915472 XP_032771362;XP_032771363 chitinase-3-like protein 1 protein-coding 626009823 Mesp2 mesoderm posterior bHLH transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN mesodermal cell migration (ortholog); Notch signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); spondylocostal dysostosis (ortholog); spondylocostal dysostosis 1 (ortholog); FOUND IN nucleus (ortholog) 2 120430946 120433561 - 22301074;30032202 116894272 MODEL JAAIVD010000001;XM_032895984 XP_032751875 mesoderm posterior protein 2 protein-coding 626009829 LOC116908397 small nucleolar RNA SNORA17 8 76457781 76457912 + 116908397 MODEL JAAIVD010000027;XR_004388941 snorna 626009832 LOC116911284 epoxide hydrolase 1-like 10 59373217 59386090 + 116911284 MODEL JAAIVD010000005 pseudo 626009833 LOC116900421 olfactory receptor 4C11 5 70458738 70459661 + 22301074 116900421 MODEL JAAIVD010000023;XM_032902164 XP_032758055 protein-coding 626009836 LOC116900951 PRELI domain-containing protein 1, mitochondrial-like 5 90537620 90538204 - 116900951 MODEL JAAIVD010000023 pseudo 626009837 Smim15 small integral membrane protein 15 3 190135553 190139287 + 116897209 MODEL JAAIVD010000012;XM_032898918 XP_032754809 protein-coding 626009844 Creb3l1 cAMP responsive element binding protein 3 like 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); extracellular matrix constituent secretion (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta type 16 (ortholog); teratoma (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 66124725 66165008 - 30032202 116901636 MODEL JAAIVD010000023;XM_032903724;XM_032903726 XP_032759615;XP_032759617 cyclic AMP-responsive element-binding protein 3-like protein 1 protein-coding 626009863 Rpl10a ribosomal protein L10a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); response to ethanol (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 18 5529595 5532253 - 22301074 116887299 MODEL JAAIVD010000013;XM_032888881 XP_032744772 60S ribosomal protein L10a protein-coding 626009873 Tmtc2 transmembrane O-mannosyltransferase targeting cadherins 2 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Deafness (ortholog); Nonsyndromic Sensorineural Hearing Loss (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 183484158 183867207 - 22301074;30032202 116908643 MODEL JAAIVD010000025;XM_032911909 XP_032767800 protein O-mannosyl-transferase TMTC2 protein-coding 626009889 LOC116896396 olfactory receptor 11A1-like 3 51383357 51384307 + 22301074 116896396 MODEL JAAIVD010000012;XM_032897533 XP_032753424 protein-coding 626009892 LOC116883622 prolactin-8A9 14 46170654 46176370 + 22301074;30032202 116883622 MODEL JAAIVD010000009;XM_032884812 XP_032740703 protein-coding 626009902 LOC116895465 uncharacterized LOC116895465 3 84799093 84803399 + 116895465 MODEL JAAIVD010000012;XR_004387278 ncrna 626009907 LOC116899026 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 7-like 4 56162390 56162841 + 116899026 MODEL JAAIVD010000003 pseudo 626009908 LOC116887746 U6atac minor spliceosomal RNA 18 38839317 38839363 - 116887746 MODEL JAAIVD010000013 pseudo 626009909 LOC116890421 U7 small nuclear RNA 1 217548487 217548549 + 116890421 MODEL JAAIVD010000025;XR_004386620 snrna 626009912 Ccdc107 coiled-coil domain containing 107 1 2986431 3004370 - 116891054 MODEL JAAIVD010000025;XM_032891752;XM_032891758;XM_032891768;XM_032891774;XM_032891783 XP_032747643;XP_032747649;XP_032747659;XP_032747665;XP_032747674 coiled-coil domain-containing protein 107 protein-coding 626009934 LOC116885983 5S ribosomal RNA 16 31717480 31717597 - 116885983 MODEL JAAIVD010000004 pseudo 626009935 LOC116887954 alpha-enolase-like X 64455336 64456339 + 116887954 MODEL JAAIVD010000014 pseudo 626009936 LOC116913396 ewing's tumor-associated antigen 1 homolog 1 177795055 177797447 + 116913396 MODEL JAAIVD010000025;XM_032917611 XP_032773502 protein-coding 626009940 LOC116890370 U6 spliceosomal RNA 1 54145040 54145146 + 116890370 MODEL JAAIVD010000025;XR_004386585 snrna 626009943 Mterf3 mitochondrial transcription termination factor 3 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 206404223 206423806 - 22301074;30032202 116910336 MODEL JAAIVD010000025;XM_032914195;XM_032914202;XM_032914207 XP_032770086;XP_032770093;XP_032770098 transcription termination factor 3, mitochondrial protein-coding 626009959 LOC116913724 granzyme B 12 68584433 68587913 + 22301074;30032202 116913724 MODEL JAAIVD010000007;XM_032918027 XP_032773918 protein-coding 626009968 LOC116897790 40S ribosomal protein S26 4 4427800 4428242 + 22301074;30032202 116897790 MODEL JAAIVD010000003;XM_032899210 XP_032755101 protein-coding 626009973 Tcf15 transcription factor 15 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); ear development (ortholog); establishment of epithelial cell apical/basal polarity (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 5 131494425 131500217 + 22301074;30032202 116900692 MODEL JAAIVD010000023;XM_032902395 XP_032758286 protein-coding 626009979 Ccdc71 coiled-coil domain containing 71 8 99781227 99794177 + 116907587 MODEL JAAIVD010000027;XM_032910627;XM_032910628;XR_004388827 XP_032766518;XP_032766519 coiled-coil domain-containing protein 71 protein-coding 626009991 Mip major intrinsic protein of lens fiber ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); structural constituent of eye lens (ortholog); water channel activity (ortholog); INVOLVED IN canalicular bile acid transport (ortholog); gap junction-mediated intercellular transport (ortholog); homotypic cell-cell adhesion (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 15 multiple types (ortholog); genetic disease (ortholog); FOUND IN intracellular canaliculus (ortholog); membrane (ortholog); plasma membrane (ortholog) 1 155696971 155702133 + 22301074;2377471;30032202 116905925 MODEL JAAIVD010000025;X12514;X53052;XM_032908917 CAA31035;CAA37219;XP_032764808 MIP26 (130 AA, AA 134 - 263);lens fiber major intrinsic protein protein-coding 626009998 Lrrc3 leucine rich repeat containing 3 18 1202108 1204810 - 22301074;30032202 116887088 MODEL JAAIVD010000013;XM_032888597 XP_032744488 leucine-rich repeat-containing protein 3 protein-coding 626010004 LOC116898340 putative fidgetin-like protein 2 4 46523776 46525022 - 116898340 MODEL JAAIVD010000003 pseudo 626010005 LOC116909599 cytochrome b-c1 complex subunit 8 INVOLVED IN cerebellar Purkinje cell layer development (ortholog); hippocampus development (ortholog); hypothalamus development (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 4 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 9 35920111 35922471 - 22301074;30032202 116909599 MODEL JAAIVD010000002;XM_032913221 XP_032769112 protein-coding 626010012 LOC116913852 TM2 domain-containing protein 1-like 12 68399046 68399748 - 116913852 MODEL JAAIVD010000007 pseudo 626010013 Trmt6 tRNA methyltransferase 6 non-catalytic subunit INVOLVED IN mRNA processing (ortholog); FOUND IN tRNA (m1A) methyltransferase complex (ortholog) 5 112511065 112522795 - 22301074;30032202 116902007 MODEL JAAIVD010000023;XM_032904272;XM_032904274 XP_032760163;XP_032760165 tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit TRM6 protein-coding 626010032 Slco3a1 solute carrier organic anion transporter family member 3A1 ENCODES a protein that exhibits organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of MAPK cascade (ortholog); prostaglandin transport (ortholog); FOUND IN basal plasma membrane (ortholog); plasma membrane (ortholog) 2 125958246 126238970 + 22301074;30032202 116891965 MODEL JAAIVD010000001;XM_032893407;XM_032893408 XP_032749298;XP_032749299 protein-coding 626010050 Lamtor4 late endosomal/lysosomal adaptor, MAPK and MTOR activator 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); positive regulation of TOR signaling (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 16 16044336 16050818 - 30032202 116885732 MODEL JAAIVD010000004;XM_032887042 XP_032742933 ragulator complex protein LAMTOR4 protein-coding 626010059 LOC116889493 protein tyrosine phosphatase type IVA 2-like 1 138230535 138232141 + 22301074;30032202 116889493 MODEL JAAIVD010000025;XM_032890520;XM_032890521;XM_032890522 XP_032746411;XP_032746412;XP_032746413 protein-coding 626010070 LOC116897552 small nucleolar RNA SNORA17 3 175333934 175334063 - 116897552 MODEL JAAIVD010000012;XR_004387565 snorna 626010073 Ppp3r1 protein phosphatase 3 regulatory subunit B, alpha ENCODES a protein that exhibits enzyme binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); epithelial to mesenchymal transition (ortholog); PARTICIPATES IN calcineurin signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); dilated cardiomyopathy (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN calcineurin complex (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 11 85650981 85668932 + 22301074;30032202 116912111 MODEL JAAIVD010000006;XM_032916012 XP_032771903 calcineurin subunit B type 1 protein-coding 626010082 LOC116890048 39S ribosomal protein L34, mitochondrial-like 1 206529367 206529852 + 116890048 MODEL JAAIVD010000025 pseudo 626010083 LOC116904818 U6 spliceosomal RNA 6 75628390 75628496 + 116904818 MODEL JAAIVD010000024;XR_004388469 snrna 626010086 LOC116890230 dynein light chain roadblock-type 1 1 270772580 270773213 + 22301074;30032202 116890230 MODEL JAAIVD010000025;XM_032890961 XP_032746852 protein-coding 626010091 LOC116892346 prothymosin alpha-like 2 165846887 165847153 - 30032202 116892346 MODEL JAAIVD010000001;XM_032893988 XP_032749879 protein-coding 626010094 Gkn2 gastrokine 2 INVOLVED IN gene expression (ortholog); inflammatory response (ortholog); neutrophil activation involved in immune response (ortholog); FOUND IN basal part of cell (ortholog) 6 58939881 58953337 - 30032202 116904312 MODEL JAAIVD010000024;XM_032907227 XP_032763118 gastrokine-2 protein-coding 626010103 LOC116914919 uncharacterized LOC116914919 13 281461 286453 - 116914919 MODEL JAAIVD010000008;XM_032919353 XP_032775244 uncharacterized protein LOC116914919 protein-coding 626010113 Nudcd1 NudC domain containing 1 ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 218818177 218863280 - 116911117 MODEL JAAIVD010000025;XM_032914964;XM_032914970 XP_032770855;XP_032770861 nudC domain-containing protein 1 protein-coding 626010129 LOC116902752 60S ribosomal protein L23-like 6 63112763 63113368 + 116902752 MODEL JAAIVD010000024 pseudo 626010130 LOC116914983 actin, alpha skeletal muscle-like 13 24052101 24056486 + 116914983 MODEL JAAIVD010000008 pseudo 626010131 Grm6 glutamate metabotropic receptor 6 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1B (ortholog); congenital stationary night blindness 1C (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); endoplasmic reticulum membrane (ortholog) 9 33506462 33520646 + 22301074;30032202 116908590 MODEL JAAIVD010000002;XM_032911809 XP_032767700 metabotropic glutamate receptor 6 protein-coding 626010144 LOC116887236 olfactory receptor 2A12-like 1 38275232 38276227 + 22301074 116887236 MODEL JAAIVD010000025;XM_032888801 XP_032744692 protein-coding 626010147 F13a1 coagulation factor XIII A chain ENCODES a protein that exhibits protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); peptide cross-linking (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); arteriosclerosis (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog) 14 55889901 56099130 - 22301074;30032202 116883473 MODEL JAAIVD010000009;XM_032884627 XP_032740518 protein-coding 626010167 Eif4e3 eukaryotic translation initiation factor 4E family member 3 ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 6 47406872 47447552 + 22301074;30032202 116903468 MODEL JAAIVD010000024;XM_032906020 XP_032761911 eukaryotic translation initiation factor 4E type 3 protein-coding 626010178 LOC116894689 histone-binding protein RBBP4-like 2 214025317 214026929 + 30032202 116894689 MODEL JAAIVD010000001;XM_032896389 XP_032752280 protein-coding 626010182 LOC116886362 preferentially expressed antigen in melanoma-like protein 1 1 14761083 14764747 - 22301074;30032202 116886362 MODEL JAAIVD010000025;XM_032887826 XP_032743717 protein-coding 626010189 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 34146396 34146467 + 116913056 MODEL JAAIVD010000006 trna 626010190 LOC116903096 high mobility group protein B1-like 6 4679452 4680125 - 22301074;30032202 116903096 MODEL JAAIVD010000024;XM_032905419 XP_032761310 protein-coding 626010194 Pus10 pseudouridine synthase 10 ENCODES a protein that exhibits primary miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine synthase activity (ortholog); INVOLVED IN primary miRNA processing (ortholog); tRNA pseudouridine synthesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 11 93239560 93292019 - 22301074;30032202 116912833 MODEL JAAIVD010000006;XM_032917020 XP_032772911 putative tRNA pseudouridine synthase Pus10 protein-coding 626010214 LOC116899966 prohibitin-2-like 5 100010681 100011598 + 116899966 MODEL JAAIVD010000023 pseudo 626010215 Kit KIT proto-oncogene, receptor tyrosine kinase ENCODES a protein that exhibits cytokine binding (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); acute pancreatitis (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 11 32332268 32410055 + 22301074;30032202 116912267 MODEL JAAIVD010000006;X62491;XM_032916255;XM_032916256 CAA44354;XP_032772146;XP_032772147 c-kit proto-oncogene;mast/stem cell growth factor receptor Kit protein-coding 626010242 LOC116887430 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 8558546 8560687 - 116887430 MODEL JAAIVD010000013 pseudo 626010243 Txlnb taxilin beta FOUND IN cytoplasm (ortholog) 2 219065417 219112000 - 22301074;30032202 116892995 MODEL JAAIVD010000001;XM_032894958 XP_032750849 beta-taxilin protein-coding 626010257 LOC116904330 uncharacterized LOC116904330 6 64795404 64806269 + 116904330 MODEL JAAIVD010000024 pseudo 626010258 Tubgcp5 tubulin gamma complex component 5 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule nucleation (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 143370675 143406089 - 22301074;30032202 116892047 MODEL JAAIVD010000001;XM_032893520 XP_032749411 gamma-tubulin complex component 5;tubulin gamma complex associated protein 5 protein-coding 626010285 Bcl2l12 BCL2 like 12 ENCODES a protein that exhibits p53 binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cellular senescence (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); FOUND IN nucleus (ortholog) 2 154547474 154554342 + 22301074 116892179 MODEL JAAIVD010000001;XM_032893692;XM_032893693 XP_032749583;XP_032749584 bcl-2-like protein 12 protein-coding 626010299 LOC116908261 U6 snRNA-associated Sm-like protein LSm3 8 99641286 99643466 + 116908261 MODEL JAAIVD010000027 pseudo 626010300 LOC116890057 uncharacterized LOC116890057 1 210260410 210284504 - 116890057 MODEL JAAIVD010000025;XM_032890825 XP_032746716 uncharacterized protein LOC116890057 protein-coding 626010310 LOC116886075 RNA binding motif protein, X-linked-like-1 17 21590572 21594167 + 22301074;30032202 116886075 MODEL JAAIVD010000011;XM_032887389;XM_032887390 XP_032743280;XP_032743281 protein-coding 626010320 Fkbp1a FKBP prolyl isomerase 1A ENCODES a protein that exhibits activin receptor binding (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cytokine-mediated signaling pathway (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Barth syndrome (ortholog); congenital heart disease (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 130912780 130932408 + 22301074 116902104 MODEL JAAIVD010000023;XM_032904409 XP_032760300 peptidyl-prolyl cis-trans isomerase FKBP1A protein-coding 626010329 LOC116889343 melanoma-associated antigen 10-like X 129970378 129974208 + 30032202 116889343 MODEL JAAIVD010000014;XM_032890458 XP_032746349 protein-coding 626010337 Sufu SUFU negative regulator of hedgehog signaling ENCODES a protein that exhibits beta-catenin binding (ortholog); protein kinase binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN aorta development (ortholog); coronary vasculature development (ortholog); determination of left/right symmetry (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); basal cell carcinoma (ortholog); brain glioblastoma multiforme (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); GLI-SUFU complex (ortholog) 2 45856918 45952094 + 22301074;30032202 116891250 MODEL JAAIVD010000001;XM_032892128;XM_032892129 XP_032748019;XP_032748020 suppressor of fused homolog protein-coding 626010355 LOC116894709 60S ribosomal protein L27a-like 2 227326063 227326532 + 116894709 MODEL JAAIVD010000001 pseudo 626010356 LOC116886316 oogenesin-3-like 1 14520502 14526849 - 22301074;30032202 116886316 MODEL JAAIVD010000025;XM_032887762 XP_032743653 protein-coding 626010364 LOC116893031 V-type proton ATPase catalytic subunit A-like 2 227970417 227972578 + 116893031 MODEL JAAIVD010000001 pseudo 626010365 Fbrsl1 fibrosin like 1 ASSOCIATED WITH atrial fibrillation (ortholog); Familial Prostate Cancer (ortholog); Neurodevelopmental Disorders (ortholog) 16 43910843 43999199 + 116885928 MODEL JAAIVD010000004;XM_032887236;XM_032887237 XP_032743127;XP_032743128 fibrosin-1-like protein protein-coding 626010391 Tppp2 tubulin polymerization promoting protein family member 2 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); regulation of flagellated sperm motility (ortholog); FOUND IN cytosol (ortholog); sperm flagellum (ortholog) 12 71977425 71981730 - 22301074;30032202 116913796 MODEL JAAIVD010000007;XM_032918101;XM_032918102 XP_032773992;XP_032773993 tubulin polymerization-promoting protein family member 2 protein-coding 626010400 Timm50 translocase of inner mitochondrial membrane 50 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity (ortholog); interleukin-2 receptor binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN mitochondrial membrane organization (ortholog); protein dephosphorylation (ortholog); protein import into mitochondrial matrix (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria type 9 (ortholog); genetic disease (ortholog); Mitochondrial Encephalopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); mitochondrial inner membrane (ortholog) 2 167701800 167709363 + 30032202 116892399 MODEL JAAIVD010000001;XM_032894074 XP_032749965 mitochondrial import inner membrane translocase subunit TIM50 protein-coding 626010415 Grid1 glutamate ionotropic receptor delta type subunit 1 ENCODES a protein that exhibits G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential (ortholog); GABA receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of synaptic plasticity (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); regulation of postsynapse organization (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Neurodevelopmental Disorders (ortholog); prostate cancer (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 13 10590459 11322408 + 22301074;30032202 116914746 MODEL JAAIVD010000008;XM_032919192 XP_032775083 glutamate receptor ionotropic, delta-1 protein-coding 626010435 Tmem266 transmembrane protein 266 ENCODES a protein that exhibits channel activity (ortholog); protein homodimerization activity (ortholog); voltage-gated channel activity (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); plasma membrane (ortholog) 8 49388299 49501062 + 30032202 116907331 MODEL JAAIVD010000027;XM_032910276 XP_032766167 protein-coding 626010450 Ddah1 dimethylarginine dimethylaminohydrolase 1 ENCODES a protein that exhibits amino acid binding (ortholog); dimethylargininase activity (ortholog); INVOLVED IN arginine metabolic process (ortholog); citrulline metabolic process (ortholog); L-arginine catabolic process (ortholog); ASSOCIATED WITH cardiovascular system disease (ortholog); coronary artery disease (ortholog); hypertension (ortholog) 3 14997412 15122776 - 30032202 116896179 MODEL JAAIVD010000012;XM_032897218 XP_032753109 N(G),N(G)-dimethylarginine dimethylaminohydrolase 1 protein-coding 626010460 Sorcs2 sortilin related VPS10 domain containing receptor 2 INVOLVED IN intracellular protein transport (ortholog); long-term synaptic depression (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); plasma membrane (ortholog) 11 68705836 69067935 + 22301074 116912767 MODEL JAAIVD010000006;XM_032916916;XM_032916917;XM_032916919 XP_032772807;XP_032772808;XP_032772810 VPS10 domain-containing receptor SorCS2 protein-coding 626010496 LOC116888758 prophage Rz endopeptidase RzpD-like X 15171108 15171622 + 116888758 MODEL JAAIVD010000014 pseudo 626010497 Kifc1 kinesin family member C1 ENCODES a protein that exhibits minus-end-directed microtubule motor activity (ortholog); INVOLVED IN minus-end-directed vesicle transport along microtubule (ortholog); mitotic metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN endocytic vesicle (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 18 6872249 6894940 - 22301074;30032202 116887330 MODEL JAAIVD010000013;XM_032888923 XP_032744814 kinesin-like protein KIFC1 protein-coding 626010512 Chrne cholinergic receptor nicotinic epsilon subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN monoatomic cation transport (ortholog); regulation of membrane potential (ortholog); skeletal muscle contraction (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 4 (ortholog); congenital myasthenic syndrome 4A (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); postsynaptic membrane (ortholog) 9 50229522 50237213 - 22301074;30032202 116910538 MODEL JAAIVD010000002;XM_032914445 XP_032770336 acetylcholine receptor subunit epsilon protein-coding 626010529 Mapk6 mitogen-activated protein kinase 6 ENCODES a protein that exhibits MAP kinase activity (ortholog); protein heterodimerization activity (ortholog); protein kinase activity (ortholog); INVOLVED IN positive regulation of dendritic spine development (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Hyperplasia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 8 69675541 69698765 - 22301074;30032202 116906620 MODEL JAAIVD010000027;XM_032909377;XM_032909379 XP_032765268;XP_032765270 protein-coding 626010542 LOC116899802 U7 small nuclear RNA 4 28623356 28623418 + 116899802 MODEL JAAIVD010000003;XR_004387804 snrna 626010545 Prkcg protein kinase C gamma ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine/tyrosine kinase activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); chemosensory behavior (ortholog); innervation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Animal Disease Models (ortholog); autosomal dominant cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 14 (ortholog); FOUND IN calyx of Held (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 2 177946941 177973335 + 22301074;3387228 116892691 MODEL JAAIVD010000001;X07287;XM_032894549 CAA30267;XP_032750440 protein kinase C gamma type protein-coding 626010567 LOC116890577 small nucleolar RNA SNORA17 1 6843934 6844049 - 116890577 MODEL JAAIVD010000025 pseudo 626010568 LOC116901664 HIG1 domain family member 1A, mitochondrial-like 5 74882453 74882735 + 116901664 MODEL JAAIVD010000023 pseudo 626010569 Brap BRCA1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); nuclear localization sequence binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH myocardial infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 16 32145400 32172448 - 22301074;30032202 116885425 MODEL JAAIVD010000004;XM_032886711 XP_032742602 BRCA1-associated protein protein-coding 626010585 LOC116905438 uncharacterized LOC116905438 7 123001004 123045802 + 116905438 MODEL JAAIVD010000026;XR_004388527 ncrna 626010590 Mbd5 methyl-CpG binding domain protein 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); nervous system development (ortholog); positive regulation of growth hormone receptor signaling pathway (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN chromocenter (ortholog); midbody (ortholog); nucleoplasm (ortholog) 5 27045893 27183115 + 22301074;30032202 116901392 MODEL JAAIVD010000023;XM_032903262;XM_032903263 XP_032759153;XP_032759154 methyl-CpG-binding domain protein 5 protein-coding 626010610 Bmp7 bone morphogenetic protein 7 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); heparin binding (ortholog); INVOLVED IN allantois development (ortholog); ameloblast differentiation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); Acute Otitis Media (ortholog); atrial heart septal defect 8 (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); vesicle (ortholog) 5 145050523 145101626 + 30032202 116901079 MODEL JAAIVD010000023;XM_032902643 XP_032758534 protein-coding 626010616 LOC116907284 olfactory receptor 7D4-like 8 16472851 16473804 + 22301074;30032202 116907284 MODEL JAAIVD010000027;XM_032910235 XP_032766126 protein-coding 626010620 LOC116913248 testis-expressed protein 264-like 12 79380716 79395782 + 116913248 MODEL JAAIVD010000007 pseudo 626010621 LOC116884408 26S proteasome non-ATPase regulatory subunit 14-like 15 68534422 68560922 + 116884408 MODEL JAAIVD010000010 pseudo 626010622 Eif5b eukaryotic translation initiation factor 5B ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN regulation of translational initiation (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); synapse (ortholog) 4 114186920 114240596 + 22301074;30032202 116899308 MODEL JAAIVD010000003;XM_032900968 XP_032756859 protein-coding 626010650 LOC116904643 5S ribosomal RNA 6 6897234 6897352 - 116904643 MODEL JAAIVD010000024;XR_004388346 rrna 626010653 LOC116897203 hsc70-interacting protein-like 3 188021103 188022161 + 116897203 MODEL JAAIVD010000012 pseudo 626010654 Tcirg1 T cell immune regulator 1, ATPase H+ transporting V0 subunit a3 INVOLVED IN apoptotic process (ortholog); autophagosome assembly (ortholog); autophagy (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 1 (ortholog); choreaacanthocytosis (ortholog); clubfoot (ortholog); FOUND IN apical plasma membrane (ortholog); late endosome (ortholog); lysosome (ortholog) 2 3743167 3755116 + 22301074;30032202 116890802 MODEL JAAIVD010000001;XM_032891284 XP_032747175 V-type proton ATPase 116 kDa subunit a protein-coding 626010678 LOC116913714 olfactory receptor 11G2-like 12 72743958 72744926 - 22301074 116913714 MODEL JAAIVD010000007;XM_032918009 XP_032773900 protein-coding 626010682 LOC116900567 olfactory receptor 4F15-like 5 90234653 90235588 - 22301074 116900567 MODEL JAAIVD010000023;XM_032902291 XP_032758182 protein-coding 626010685 LOC116888670 alpha-enolase-like X 56416657 56418141 + 116888670 MODEL JAAIVD010000014 pseudo 626010686 Osbpl11 oxysterol binding protein like 11 INVOLVED IN fat cell differentiation (ortholog); triglyceride homeostasis (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 4 17975909 18038275 + 30032202 116898790 MODEL JAAIVD010000003;XM_032900134;XM_032900135;XM_032900136 XP_032756025;XP_032756026;XP_032756027 oxysterol-binding protein-related protein 11 protein-coding 626010709 LOC116907077 olfactory receptor 145-like 8 32587715 32590224 + 22301074;30032202 116907077 MODEL JAAIVD010000027;XM_032910031 XP_032765922 protein-coding 626010713 LOC116889355 protein PPP4R3C-like X 67912275 67914666 - 116889355 MODEL JAAIVD010000014 pseudo 626010714 LOC116884706 protocadherin alpha-7 15 7394722 7398044 - 22301074 116884706 MODEL JAAIVD010000010;XM_032885894 XP_032741785 protein-coding 626010719 LOC116890848 uncharacterized LOC116890848 2 6803133 6810369 - 116890848 MODEL JAAIVD010000001 pseudo 626010720 LOC116885492 kinesin-like protein KIF19 16 12706117 12752848 - 22301074;30032202 116885492 MODEL JAAIVD010000004;XM_032886782 XP_032742673 protein-coding 626010744 LOC116908363 small nucleolar RNA SNORA20 8 64821956 64822085 + 116908363 MODEL JAAIVD010000027;XR_004388913 snorna 626010747 Adcy4 adenylate cyclase 4 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; protein kinase A (PKA) signaling pathway; FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) 12 69219750 69235569 + 22301074;30032202 116913835 MODEL JAAIVD010000007;XM_032918149 XP_032774040 adenylate cyclase type 4 protein-coding 626010777 LOC116915236 cyclin-dependent kinases regulatory subunit 2-like 14 59481971 59482183 - 30032202 116915236 MODEL JAAIVD010000009;XM_032919630 XP_032775521 protein-coding 626010780 Clp1 cleavage factor polyribonucleotide kinase subunit 1 ENCODES a protein that exhibits ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); ATP-dependent polyribonucleotide 5'-hydroxyl-kinase activity (ortholog); INVOLVED IN cerebellar cortex development (ortholog); global gene silencing by mRNA cleavage (ortholog); RISC complex assembly (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; tRNA maturation pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); pontocerebellar hypoplasia type 10 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 62104263 62107998 - 22301074;30032202 116901586 MODEL JAAIVD010000023;XM_032903602 XP_032759493 polyribonucleotide 5'-hydroxyl-kinase Clp1 protein-coding 626010787 Ppia peptidylprolyl isomerase A ENCODES a protein that exhibits cyclosporin A binding (ortholog); heparan sulfate binding (ortholog); integrin binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); apoptotic process (ortholog); cell adhesion molecule production (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); atopic dermatitis (ortholog); Bell's palsy (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 11 75341444 75344946 + 22301074 116912260 MODEL JAAIVD010000006;XM_032916245 XP_032772136 peptidyl-prolyl cis-trans isomerase A protein-coding 626010796 Arhgef5 Rho guanine nucleotide exchange factor 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); hematopoietic stem cell homeostasis (ortholog); myeloid dendritic cell chemotaxis (ortholog); ASSOCIATED WITH Genetic Predisposition to Disease (ortholog); Lung Neoplasms (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 97352195 97376144 - 22301074;30032202 116903889 MODEL JAAIVD010000024;XM_032906649 XP_032762540 protein-coding 626010815 Bzw2 basic leucine zipper and W2 domains 2 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog) 7 49363349 49421335 - 22301074;30032202 116904977 MODEL JAAIVD010000026;XM_032907657 XP_032763548 basic leucine zipper and W2 domain-containing protein 2 protein-coding 626010831 Kdm6b lysine demethylase 6B ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cell fate commitment (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast carcinoma (ortholog); Developmental Disease (ortholog); FOUND IN nucleus (ortholog) 9 49011071 49032104 - 22301074;30032202 116910602 MODEL JAAIVD010000002;XM_032914532;XM_032914533;XM_032914534;XM_032914535;XM_032914536;XM_032914537;XM_032914538;XM_032914539;XM_032914540;XM_032914542;XM_032914543;XM_032914544 XP_032770423;XP_032770424;XP_032770425;XP_032770426;XP_032770427;XP_032770428;XP_032770429;XP_032770430;XP_032770431;XP_032770433;XP_032770434;XP_032770435 lysine-specific demethylase 6B protein-coding 626010892 Proser3 proline and serine rich 3 FOUND IN centrosome (ortholog) 2 165457212 165469560 + 116892315 MODEL JAAIVD010000001;XM_032893939 XP_032749830 proline and serine-rich protein 3 protein-coding 626010906 Mcmbp minichromosome maintenance complex binding protein ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); sister chromatid cohesion (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); MCM complex (ortholog) 2 73203262 73249291 + 30032202 116891430 MODEL JAAIVD010000001;XM_032892483 XP_032748374 mini-chromosome maintenance complex-binding protein protein-coding 626010926 Shc4 SHC adaptor protein 4 ENCODES a protein that exhibits protein domain specific binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN apoptotic process (ortholog); positive regulation of cell population proliferation (ortholog); regulation of gene expression (ortholog) 5 103962329 104056497 - 22301074;30032202 116901907 MODEL JAAIVD010000023;XM_032904121 XP_032760012 SHC-transforming protein 4 protein-coding 626010942 Cbs cystathionine beta-synthase ENCODES a protein that exhibits carbon monoxide binding (ortholog); cystathionine beta-synthase activity (ortholog); enzyme binding (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); blood vessel remodeling (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN cystathioninuria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cardiovascular system disease (ortholog); cerebral infarction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 2226179 2252162 + 22301074;30032202 116887202 MODEL JAAIVD010000013;XM_032888759 XP_032744650 protein-coding 626010963 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41439988 41440059 + 116884199 MODEL JAAIVD010000009 trna 626010964 LOC116900529 adenosylhomocysteinase-like 5 87831603 87832864 - 116900529 MODEL JAAIVD010000023 pseudo 626010965 LOC116906116 zinc finger matrin-type protein 2-like 7 82752976 82753610 - 116906116 MODEL JAAIVD010000026 pseudo 626010966 Rtf1 RTF1 homolog, Paf1/RNA polymerase II complex component ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); chromatin organization (ortholog); endodermal cell fate commitment (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); nucleolus (ortholog) 5 97845106 97903163 + 22301074;30032202 116901818 MODEL JAAIVD010000023;XM_032903976 XP_032759867 RNA polymerase-associated protein RTF1 homolog protein-coding 626010987 Defb129 defensin beta 129 5 131775083 131779158 - 22301074 116900693 MODEL JAAIVD010000023;XM_032902396 XP_032758287 beta-defensin 129 protein-coding 626010991 LOC116883591 aldo-keto reductase family 1 member C21-like 14 19892662 19905092 - 116883591 MODEL JAAIVD010000009 pseudo 626010992 Adra2b adrenoceptor alpha 2B ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); angiogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Cyanosis (ortholog); Diabetic Nephropathies (ortholog); diabetic neuropathy (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 106148097 106152122 + 22301074;30032202 116900619 MODEL JAAIVD010000023;XM_032902338 XP_032758229 alpha-2B adrenergic receptor protein-coding 626010997 C2cd4d C2 calcium dependent domain containing 4D 3 62811137 62814092 - 116896591 MODEL JAAIVD010000012;XM_032897833 XP_032753724 C2 calcium-dependent domain-containing protein 4D protein-coding 626011003 Coro2b coronin 2B ENCODES a protein that exhibits talin binding (ortholog); vinculin binding (ortholog); INVOLVED IN focal adhesion assembly (ortholog); negative regulation of cell-substrate adhesion (ortholog); negative regulation of establishment of protein localization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN focal adhesion (ortholog) 8 56724076 56835256 - 30032202 116906612 MODEL JAAIVD010000027;XM_032909371 XP_032765262 coronin-2B protein-coding 626011019 Itgb2 integrin subunit beta 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); amyloid-beta clearance (ortholog); cell adhesion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; integrin mediated signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); allergic disease (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); integrin alphaL-beta2 complex (ortholog) 18 872085 909423 + 30032202 116887368 MODEL JAAIVD010000013;XM_032888963 XP_032744854 integrin beta-2 protein-coding 626011039 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889725 MODEL JAAIVD010000061 trna 626011040 LOC116912591 PRAME family member 8-like 11 48569080 48571750 + 22301074;30032202 116912591 MODEL JAAIVD010000006;XM_032916709;XM_032916710;XM_032916711 XP_032772600;XP_032772601;XP_032772602 protein-coding 626011048 LOC116906443 small nucleolar RNA SNORA17 7 104042728 104042849 + 116906443 MODEL JAAIVD010000026 pseudo 626011049 LOC116900829 Y-box-binding protein 1-like 5 46438511 46440690 + 116900829 MODEL JAAIVD010000023 pseudo 626011050 LOC116912535 proteasome subunit beta type-3-like 1 172439276 172502112 + 116912535 MODEL JAAIVD010000025 pseudo 626011051 LOC116895088 small nucleolar RNA SNORA11 2 164552845 164552967 + 116895088 MODEL JAAIVD010000001;XR_004387255 snorna 626011054 Kif5c kinesin family member 5C ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); ATP hydrolysis activity (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of messenger ribonucleoprotein complex (ortholog); intracellular mRNA localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Alzheimer's disease 3 (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN axonal growth cone (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) 5 27483994 27633566 + 22301074;30032202 116901395 MODEL JAAIVD010000023;XM_032903267 XP_032759158 kinesin heavy chain protein-coding 626011084 LOC116907209 olfactory receptor 147-like 8 32385040 32386017 - 22301074;30032202 116907209 MODEL JAAIVD010000027;XM_032910178 XP_032766069 protein-coding 626011087 LOC116903941 putative RNA-binding protein Luc7-like 2 6 101192543 101249971 - 22301074;30032202 116903941 MODEL JAAIVD010000024;XM_032906722;XM_032906723;XM_032906724;XM_032906725;XM_032906726;XM_032906727;XM_032906728;XM_032906729;XM_032906730;XM_032906731 XP_032762613;XP_032762614;XP_032762615;XP_032762616;XP_032762617;XP_032762618;XP_032762619;XP_032762620;XP_032762621;XP_032762622 protein-coding 626011129 LOC116898331 olfactory receptor 183-like 4 42849161 42850099 + 22301074;30032202 116898331 MODEL JAAIVD010000003;XM_032899663 XP_032755554 protein-coding 626011132 Ager advanced glycosylation end-product specific receptor ENCODES a protein that exhibits advanced glycation end-product binding (ortholog); amyloid-beta binding (ortholog); DNA binding (ortholog); INVOLVED IN astrocyte activation (ortholog); astrocyte development (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Ras mediated signaling pathway; receptor for advanced glycation end-products signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) 18 7280584 7283838 + 30032202 116886827 A0A0N9H889 MODEL JAAIVD010000013;KT211359;XM_032888259;XM_032888260;XM_032888261 ALF95231;XP_032744150;XP_032744151;XP_032744152 RAGE advanced glycosylation end product-specific receptor protein-coding 626011153 Cryba1 crystallin beta A1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); lens development in camera-type eye (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH age related macular degeneration 1 (ortholog); cataract (ortholog); cataract 10 multiple types (ortholog) 9 96400523 96405783 - 30032202 116910226 MODEL JAAIVD010000002;XM_032914117 XP_032770008 beta-crystallin A3 protein-coding 626011162 Rps27a ribosomal protein S27a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 11 97165178 97167236 - 22301074;30032202 116912163 MODEL JAAIVD010000006;XM_032916082 XP_032771973 ubiquitin-40S ribosomal protein S27a protein-coding 626011172 Dtwd1 DTW motif tRNA-uridine aminocarboxypropyltransferase 1 ENCODES a protein that exhibits tRNA-uridine aminocarboxypropyltransferase activity (ortholog); INVOLVED IN tRNA modification (ortholog); FOUND IN nucleus (ortholog) 5 104457245 104470780 + 30032202 116901912 MODEL JAAIVD010000023;XM_032904129;XM_032904130 XP_032760020;XP_032760021 DTW domain containing 1;DTW domain-containing protein 1 protein-coding 626011184 LOC116902488 U6 spliceosomal RNA 5 130633680 130633785 - 116902488 MODEL JAAIVD010000023;XR_004388104 snrna 626011187 Sertm1 serine rich and transmembrane domain containing 1 3 99517575 99520596 + 30032202 116896866 MODEL JAAIVD010000012;XM_032898395 XP_032754286 serine-rich and transmembrane domain-containing protein 1 protein-coding 626011192 Znf768 zinc finger protein 768 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 2 74538412 74541265 + 22301074 116891478 MODEL JAAIVD010000001;XM_032892578 XP_032748469 protein-coding 626011198 Nr0b2 nuclear receptor subfamily 0 group B member 2 ENCODES a protein that exhibits nuclear retinoic acid receptor binding (ortholog); nuclear retinoid X receptor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcoholic hepatitis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 1 24676436 24679844 - 30032202 116886831 MODEL JAAIVD010000025;XM_032888274 XP_032744165 protein-coding 626011204 LOC116899933 5S ribosomal RNA 4 111539738 111539855 - 116899933 MODEL JAAIVD010000003;XR_004387901 rrna 626011207 LOC116887853 dystrophin-like X 42543681 43112911 - 22301074;30032202 116887853 MODEL JAAIVD010000014;XM_032889357 XP_032745248 protein-coding 626011227 LOC116897937 olfactory receptor 183-like 4 42925560 42926498 - 22301074;30032202 116897937 MODEL JAAIVD010000003;XM_032899336 XP_032755227 protein-coding 626011231 LOC116889960 olfactory receptor 6C6-like 1 161902562 161903492 - 116889960 MODEL JAAIVD010000025 pseudo 626011232 Chrm4 cholinergic receptor muscarinic 4 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphai protein family; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Catatonia (ortholog); congestive heart failure (ortholog); Tremor (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); glutamatergic synapse (ortholog) 5 66066028 66073861 + 22301074;30032202 116901632 MODEL JAAIVD010000023;XM_032903715;XM_032903716;XM_032903718 XP_032759606;XP_032759607;XP_032759609 muscarinic acetylcholine receptor M4 protein-coding 626011245 Slc28a3 solute carrier family 28 member 3 ENCODES a protein that exhibits purine-specific nucleoside:sodium symporter activity (ortholog); pyrimidine- and adenosine-specific:sodium symporter activity (ortholog); uridine transmembrane transporter activity (ortholog); INVOLVED IN nucleoside transmembrane transport (ortholog); purine nucleoside transmembrane transport (ortholog); pyrimidine nucleoside transport (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN brush border membrane (ortholog) 14 79527108 79576643 + 22301074;30032202 116883692 MODEL JAAIVD010000009;XM_032884905 XP_032740796 protein-coding 626011265 Prkcq protein kinase C theta ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cell chemotaxis (ortholog); intracellular signal transduction (ortholog); membrane protein ectodomain proteolysis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); Hyperammonemia (ortholog); hyperinsulinism (ortholog); FOUND IN aggresome (ortholog); centriolar satellite (ortholog); cytoplasm (ortholog) 14 17200384 17331998 + 22301074;30032202 116883779 MODEL JAAIVD010000009;XM_032885022 XP_032740913 protein kinase C theta type protein-coding 626011287 LOC116893047 uncharacterized LOC116893047 2 229718624 229730707 - 116893047 MODEL JAAIVD010000001;XR_004386993 ncrna 626011292 LOC116886699 uncharacterized LOC116886699 17 16218456 16230917 + 116886699 MODEL JAAIVD010000011;XR_004386124;XR_004386125 ncrna 626011299 LOC116900376 olfactory receptor 5L1-like 5 69523672 69524625 - 22301074;30032202 116900376 MODEL JAAIVD010000023;XM_032902125 XP_032758016 protein-coding 626011302 Actn3 actinin alpha 3 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); focal adhesion assembly (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN brush border (ortholog); focal adhesion (ortholog); sarcomere (ortholog) 2 2782268 2797803 + 22301074;30032202 116890756 MODEL JAAIVD010000001;XM_032891212 XP_032747103 alpha-actinin-3 protein-coding 626011327 Atn1 atrophin 1 ENCODES a protein that exhibits JUN kinase binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell killing (ortholog); cell migration (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH Congenital Hypotonia, Epilepsy, Developmental Delay, and Digital Anomalies (ortholog); dentatorubral-pallidoluysian atrophy (ortholog); genetic disease (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); nuclear matrix (ortholog) 6 23127526 23141645 + 30032202 116903282 MODEL JAAIVD010000024;XM_032905704 XP_032761595 atrophin-1 protein-coding 626011341 LOC116905912 60S ribosomal protein L3-like 7 127403570 127404753 + 116905912 MODEL JAAIVD010000026 pseudo 626011342 Nifk nucleolar protein interacting with the FHA domain of MKI67 ENCODES a protein that exhibits RNA binding (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) 10 10880361 10890419 + 22301074;30032202 116911359 MODEL JAAIVD010000005;XM_032915282;XM_032915283 XP_032771173;XP_032771174 MKI67 FHA domain-interacting nucleolar phosphoprotein protein-coding 626011358 Dnai1 dynein axonemal intermediate chain 1 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); cilium (ortholog) 1 3913558 3981360 - 30032202 116889007 MODEL JAAIVD010000025;XM_032890220 XP_032746111 dynein intermediate chain 1, axonemal protein-coding 626011381 LOC116889519 small nucleolar RNA SNORA17 X 84976768 84976899 - 116889519 MODEL JAAIVD010000014;XR_004386461 snorna 626011384 Lpp LIM domain containing preferred translocation partner in lipoma PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); juvenile rheumatoid arthritis (ortholog); schizophrenia (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); plasma membrane (ortholog) 4 9177318 9774505 + 30032202 116898732 MODEL JAAIVD010000003;XM_032900039 XP_032755930 lipoma-preferred partner protein-coding 626011401 Yju2b YJU2 splicing factor homolog B INVOLVED IN response to virus (ortholog) 17 16022601 16034225 + 22301074;30032202 116886415 MODEL JAAIVD010000011;XM_032887891;XM_032887893;XM_032887894;XM_032887895 XP_032743782;XP_032743784;XP_032743785;XP_032743786 Ccdc130 coiled-coil domain containing 130;coiled-coil domain-containing protein 130 protein-coding 626011424 LOC116893814 steroid 17-alpha-hydroxylase/17,20 lyase ENCODES a protein that exhibits heme binding (ortholog); steroid 17-alpha-monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen biosynthetic process (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 17,20-Lyase Deficiency, Isolated (ortholog); amenorrhea (ortholog); breast cancer (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); endoplasmic reticulum (ortholog) 2 46133701 46139722 - 22301074;30032202 116893814 MODEL JAAIVD010000001;XM_032895529 XP_032751420 protein-coding 626011436 LOC116887606 H-2 class I histocompatibility antigen, alpha chain-like 18 9428433 9438616 + 116887606 MODEL JAAIVD010000013 pseudo 626011437 Pofut3 protein O-fucosyltransferase 3 ENCODES a protein that exhibits alpha-(1->3)-fucosyltransferase activity (ortholog); fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); N-glycan fucosylation (ortholog); N-glycan processing (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 13 55655851 55725687 - 22301074;30032202 116914833 MODEL JAAIVD010000008;XM_032919290 XP_032775181 Fut10 alpha-(1,3)-fucosyltransferase 10;fucosyltransferase 10 protein-coding 626011445 Ankrd53 ankyrin repeat domain 53 INVOLVED IN mitotic metaphase chromosome alignment (ortholog); positive regulation of microtubule polymerization (ortholog); regulation of mitotic cytokinesis (ortholog); FOUND IN spindle (ortholog); spindle pole (ortholog) 6 62478862 62485755 - 22301074;30032202 116904324 MODEL JAAIVD010000024;XM_032907231 XP_032763122 ankyrin repeat domain-containing protein 53 protein-coding 626011454 Xk X-linked Kx blood group antigen, Kell and VPS13A binding protein ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); myelination (ortholog); ASSOCIATED WITH disease of mental health (ortholog); genetic disease (ortholog); hematopoietic system disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) X 11863951 11898911 - 22301074 116888532 MODEL JAAIVD010000014;XM_032889829 XP_032745720 membrane transport protein XK protein-coding 626011462 LOC116885650 uncharacterized LOC116885650 16 9364714 9371712 - 116885650 MODEL JAAIVD010000004;XR_004386030 ncrna 626011466 LOC116912909 cytochrome c, somatic-like 11 61994694 61995592 + 116912909 MODEL JAAIVD010000006 pseudo 626011467 LOC116894329 mas-related G-protein coupled receptor member X2-like 2 151928451 151931050 + 22301074;30032202 116894329 MODEL JAAIVD010000001;XM_032896023 XP_032751914 protein-coding 626011471 Nwd1 NACHT and WD repeat domain containing 1 INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH metabolic dysfunction-associated steatohepatitis (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog) 13 19822312 19869492 - 22301074;30032202 116914653 MODEL JAAIVD010000008;XM_032919049 XP_032774940 NACHT domain- and WD repeat-containing protein 1 protein-coding 626011492 LOC116894134 olfactory receptor 52E8-like 2 103981348 103982301 + 22301074 116894134 MODEL JAAIVD010000001;XM_032895852 XP_032751743 protein-coding 626011495 Cfl1 cofilin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol bisphosphate binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); actin filament organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH brain compression (ortholog); Breast Neoplasms (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cell leading edge (ortholog); cell-cell junction (ortholog); cofilin-actin rod (ortholog) 2 2180333 2183938 - 22301074;30032202 116890724 MODEL JAAIVD010000001;XM_032891178 XP_032747069 cofilin-1 protein-coding 626011503 Kgd4 alpha-ketoglutarate dehydrogenase subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) 3 158112566 158120497 - 22301074;30032202 116897099 MODEL JAAIVD010000012;XM_032898742 XP_032754633 Mrps36 28S ribosomal protein S36, mitochondrial;mitochondrial ribosomal protein S36 protein-coding 626011511 LOC116906507 U2 spliceosomal RNA 7 112849820 112849942 - 116906507 MODEL JAAIVD010000026 pseudo 626011512 LOC116904503 transformer-2 protein homolog alpha-like 1 143934065 143934658 + 116904503 MODEL JAAIVD010000025 pseudo 626011513 Fam216b family with sequence similarity 216 member B 12 46317419 46323729 + 116913162 MODEL JAAIVD010000007;XM_032917367 XP_032773258 protein FAM216B protein-coding 626011520 LOC116887874 mRNA turnover protein 4 homolog X 48269197 48269885 - 116887874 MODEL JAAIVD010000014 pseudo 626011521 LOC116888310 cancer/testis antigen 55-like X 116965068 116977763 - 116888310 MODEL JAAIVD010000014;XM_032889582 XP_032745473 protein-coding 626011529 LOC116903779 taste receptor type 2 member 8-like 6 16483095 16483991 - 22301074;30032202 116903779 MODEL JAAIVD010000024;XM_032906470 XP_032762361 protein-coding 626011532 LOC116893331 kallikrein-15-like 2 155417863 155424027 - 116893331 MODEL JAAIVD010000001 pseudo 626011533 Kif3c kinesin family member 3C ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); atrial fibrillation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); growth cone (ortholog) 7 24057072 24097169 + 22301074;30032202 116906015 MODEL JAAIVD010000026;XM_032909056 XP_032764947 kinesin-like protein KIF3C protein-coding 626011545 LOC116900036 40S ribosomal protein S26-like 5 851544 851892 - 22301074;30032202 116900036 MODEL JAAIVD010000023;XM_032901832 XP_032757723 protein-coding 626011550 LOC116908451 U4 spliceosomal RNA 8 18270895 18271079 + 116908451 MODEL JAAIVD010000027 pseudo 626011551 Ccdc9b coiled-coil domain containing 9B 5 96908238 96920114 - 116901786 MODEL JAAIVD010000023;XM_032903930;XM_032903931;XM_032903932 XP_032759821;XP_032759822;XP_032759823 coiled-coil domain-containing protein 9B protein-coding 626011574 LOC116889597 eukaryotic translation initiation factor 2 subunit 3, Y-linked Y 14069 34074 + 22301074;30032202 116889597 MODEL JAAIVD010000015;XM_032890531 XP_032746422 protein-coding 626011590 LOC116900843 multifunctional protein ADE2-like 5 55432446 55437751 - 116900843 MODEL JAAIVD010000023 pseudo 626011591 Pdxp pyridoxal phosphatase ENCODES a protein that exhibits growth factor binding (ortholog); heat shock protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN actin rod assembly (ortholog); cellular response to ATP (ortholog); dephosphorylation (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cleavage furrow (ortholog) 7 122167260 122167974 - 30032202 116905427 MODEL JAAIVD010000026;XM_032908376 XP_032764267 pyridoxal phosphate phosphatase protein-coding 626011596 Nxpe3 neurexophilin and PC-esterase domain family member 3 4 39947580 40033902 - 116898895 MODEL JAAIVD010000003;XM_032900292 XP_032756183 NXPE family member 3 protein-coding 626011606 Anpep alanyl aminopeptidase, membrane ENCODES a protein that exhibits aminopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptide binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); metanephric proximal tubule development (ortholog); peptide catabolic process (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; glutathione metabolic pathway; glutathione synthase deficiency pathway; ASSOCIATED WITH severe acute respiratory syndrome (ortholog); urinary bladder cancer (ortholog); FOUND IN brush border membrane (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); external side of plasma membrane (ortholog) 2 120403839 120422586 + 22301074;30032202 116891935 MODEL JAAIVD010000001;XM_032893376 XP_032749267 aminopeptidase N protein-coding 626011630 LOC116891084 cGMP-dependent protein kinase 1 2 30684934 30793417 - 22301074 116891084 MODEL JAAIVD010000001;XM_032891798 XP_032747689 protein-coding 626011644 LOC116904611 COMM domain-containing protein 6-like 6 26856124 26857209 - 116904611 MODEL JAAIVD010000024 pseudo 626011645 Anapc2 anaphase promoting complex subunit 2 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); negative regulation of gene expression (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aplastic anemia (ortholog); Fetal Growth Retardation (ortholog); FOUND IN anaphase-promoting complex (ortholog) 5 11899652 11911237 - 22301074;30032202 116901311 MODEL JAAIVD010000023;XM_032903121 XP_032759012 anaphase-promoting complex subunit 2 protein-coding 626011662 Col14a1 collagen type XIV alpha 1 chain INVOLVED IN collagen fibril organization (ortholog); homeostasis of number of cells within a tissue (ortholog); regulation of cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN interstitial matrix (ortholog) 1 229713639 229923541 + 22301074;30032202 116911584 MODEL JAAIVD010000025;XM_032915565 XP_032771456 collagen alpha-1(XIV) chain protein-coding 626011714 Rspry1 ring finger and SPRY domain containing 1 ASSOCIATED WITH genetic disease (ortholog); Spondyloepimetaphyseal Dysplasia, Faden-Alkuraya Type (ortholog) 17 1496711 1545930 + 22301074;30032202 116886521 MODEL JAAIVD010000011;XM_032888033 XP_032743924 RING finger and SPRY domain-containing protein 1 protein-coding 626011733 Dmrt2 doublesex and mab-3 related transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of myotome development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH gonadal dysgenesis (ortholog) 2 25780898 25787417 + 30032202 116893750 MODEL JAAIVD010000001;XM_032895458 XP_032751349 doublesex- and mab-3-related transcription factor 2 protein-coding 626011741 Tbata thymus, brain and testes associated ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); nucleus (ortholog) 18 27008135 27022292 + 116887136 MODEL JAAIVD010000013;XM_032888685 XP_032744576 protein TBATA protein-coding 626011753 Rgs19 regulator of G protein signaling 19 ENCODES a protein that exhibits actin binding (ortholog); G-protein alpha-subunit binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); FOUND IN brush border (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) 5 158787351 158790715 - 116902454 MODEL JAAIVD010000023;XM_032905018 XP_032760909 regulator of G-protein signaling 19 protein-coding 626011762 Plcb4 phospholipase C beta 4 ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of potassium ion transport (ortholog); phospholipase C-activating endothelin receptor signaling pathway (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Auriculocondylar Syndrome (ortholog); Auriculocondylar Syndrome 1 (ortholog); Auriculocondylar Syndrome 2 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 5 115514450 115654224 + 22301074;30032202 116902015 MODEL JAAIVD010000023;XM_032904283;XM_032904284;XM_032904285;XM_032904286 XP_032760174;XP_032760175;XP_032760176;XP_032760177 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 protein-coding 626011813 LOC116897570 small nucleolar RNA SNORA17 3 153775916 153776044 + 116897570 MODEL JAAIVD010000012;XR_004387581 snorna 626011816 LOC116905384 serine protease inhibitor A3N 7 115477652 115483333 + 30032202 116905384 MODEL JAAIVD010000026;XM_032908327 XP_032764218 protein-coding 626011824 C9H5orf58 chromosome 9 C5orf58 homolog 9 6907809 6915245 - 116909208 MODEL JAAIVD010000002;XM_032912707 XP_032768598 putative uncharacterized protein C5orf58 homolog protein-coding 626011829 Ppp4r2 protein phosphatase 4 regulatory subunit 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 6 46160190 46200168 - 22301074;30032202 116903460 MODEL JAAIVD010000024;XM_032906014 XP_032761905 serine/threonine-protein phosphatase 4 regulatory subunit 2 protein-coding 626011842 Fam199x family with sequence similarity 199, X-linked X 88781944 88808694 - 116888420 MODEL JAAIVD010000014;XM_032889690 XP_032745581 protein FAM199X protein-coding 626011852 Clcf1 cardiotrophin like cytokine factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cell surface receptor signaling pathway (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 2 (ortholog); COVID-19 (ortholog); FOUND IN CNTFR-CLCF1 complex (ortholog); CRLF-CLCF1 complex (ortholog); extracellular region (ortholog) 2 3419542 3429047 - 116890777 MODEL JAAIVD010000001;XM_032891243 XP_032747134 cardiotrophin-like cytokine factor 1 protein-coding 626011859 Rnf180 ring finger protein 180 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN adult behavior (ortholog); norepinephrine metabolic process (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Triple Negative Breast Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 3 192053471 192220689 + 22301074;30032202 116897219 MODEL JAAIVD010000012;XM_032898938 XP_032754829 E3 ubiquitin-protein ligase RNF180 protein-coding 626011872 LOC116914995 ralA-binding protein 1-like 13 28596702 28603388 - 116914995 MODEL JAAIVD010000008 pseudo 626011873 Ripply1 ripply transcriptional repressor 1 INVOLVED IN bone morphogenesis (ortholog); Notch signaling pathway (ortholog); regulation of gene expression (ortholog) X 92294751 92297746 + 30032202 116888645 MODEL JAAIVD010000014;XM_032889936 XP_032745827 protein ripply1 protein-coding 626011881 LOC116907128 dehydrodolichyl diphosphate synthase complex subunit Nus1-like 8 20250235 20267012 + 116907128 MODEL JAAIVD010000027 pseudo 626011882 LOC116902577 small nucleolar RNA SNORA17 5 154086156 154086285 - 116902577 MODEL JAAIVD010000023;XR_004388170 snorna 626011885 Dalrd3 DALR anticodon binding domain containing 3 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN tRNA C3-cytosine methylation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 86 (ortholog) 8 99899454 99902416 + 22301074;30032202 116907599 MODEL JAAIVD010000027;XM_032910649 XP_032766540 DALR anticodon-binding domain-containing protein 3 protein-coding 626011900 LOC116904352 high mobility group protein B1-like 6 75247798 75248448 + 116904352 MODEL JAAIVD010000024 pseudo 626011901 LOC116910387 stathmin-like 9 90546518 90547202 - 116910387 MODEL JAAIVD010000002 pseudo 626011902 LOC116909175 mRNA decay activator protein ZFP36L2-like 1 159924814 159935320 - 116909175 MODEL JAAIVD010000025 pseudo 626011903 LOC116910917 olfactory receptor 10J1-like 10 52159180 52159993 - 116910917 MODEL JAAIVD010000005 pseudo 626011904 LOC116911801 small nucleolar RNA SNORA70 10 7238366 7238500 - 116911801 MODEL JAAIVD010000005;XR_004389343 snorna 626011907 Yif1a Yip1 interacting factor homolog A, membrane trafficking protein ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 2 2559204 2563379 - 22301074;30032202 116890735 MODEL JAAIVD010000001;XM_032891191 XP_032747082 protein YIF1A protein-coding 626011919 Dmxl1 Dmx like 1 ASSOCIATED WITH high grade glioma (ortholog) 15 36685159 36838166 - 22301074;30032202 116884525 MODEL JAAIVD010000010;XM_032885660;XM_032885661;XM_032885662;XM_032885663;XM_032885664 XP_032741551;XP_032741552;XP_032741553;XP_032741554;XP_032741555 dmX-like protein 1 protein-coding 626011973 Rai2 retinoic acid induced 2 ASSOCIATED WITH dextrocardia (ortholog) X 22942360 23003753 - 30032202 116888668 MODEL JAAIVD010000014;XM_032889966 XP_032745857 retinoic acid-induced protein 2 protein-coding 626011979 LOC116895532 late cornified envelope protein 3D-like 3 120356197 120356493 + 22301074 116895532 MODEL JAAIVD010000012;XM_032896777 XP_032752668 protein-coding 626011982 LOC116897745 DNA-directed RNA polymerase II subunit GRINL1A-like 4 814178 815396 + 116897745 MODEL JAAIVD010000003 pseudo 626011983 Trnas-cga transfer RNA serine (anticodon CGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41665630 41665711 + 116884208 MODEL JAAIVD010000009 trna 626011984 LOC116898376 roundabout homolog 2-like 4 67935762 67948730 + 30032202 116898376 MODEL JAAIVD010000003;XM_032899682 XP_032755573 protein-coding 626011990 Acer1 alkaline ceramidase 1 ENCODES a protein that exhibits N-acylsphingosine amidohydrolase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to calcium ion (ortholog); ceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) 4 88335268 88364285 - 22301074;30032202 116899202 MODEL JAAIVD010000003;XM_032900790;XM_032900791 XP_032756681;XP_032756682 protein-coding 626012001 LOC116886738 small nucleolar RNA SNORA17 17 48249398 48249528 + 116886738 MODEL JAAIVD010000011;XR_004386146 snorna 626012004 Mphosph6 M-phase phosphoprotein 6 INVOLVED IN maturation of 5.8S rRNA (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nuclear exosome (RNase complex) (ortholog) 17 37456997 37467071 - 30032202 116886441 MODEL JAAIVD010000011;XM_032887933 XP_032743824 protein-coding 626012013 Phf13 PHD finger protein 13 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN chromosome segregation (ortholog); DNA damage response (ortholog); mitotic cell cycle (ortholog); FOUND IN nucleus (ortholog) 1 8745134 8751848 + 30032202 116892396 MODEL JAAIVD010000025;XM_032894072 XP_032749963 protein-coding 626012021 LOC116908567 uncharacterized LOC116908567 9 39773194 39781501 + 116908567 MODEL JAAIVD010000002;XM_032911770 XP_032767661 uncharacterized protein LOC116908567 protein-coding 626012029 LOC116884385 60S ribosomal protein L15-like 15 55727813 55728446 + 116884385 MODEL JAAIVD010000010 pseudo 626012030 Pdha2 pyruvate dehydrogenase E1 subunit alpha 2 ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 1 (ortholog); spermatogenic failure 70 (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog); pyruvate dehydrogenase complex (ortholog) 3 18692681 18694227 - 22301074;7916643 116895296 MODEL JAAIVD010000012;XM_032896608;XM_032896609;Z18878 CAA79318;XP_032752499;XP_032752500 pyruvate dehydrogenase (lipoamide);pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial protein-coding 626012038 Ints1 integrator complex subunit 1 INVOLVED IN blastocyst growth (ortholog); embryo implantation (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with cataracts, poor growth, and dysmorphic facies (ortholog); FOUND IN INTAC complex (ortholog); integrator complex (ortholog); nucleus (ortholog) 16 13416110 13440158 + 30032202 116885349 MODEL JAAIVD010000004;XM_032886624 XP_032742515 protein-coding 626012089 Mob1b MOB kinase activator 1B ENCODES a protein that exhibits kinase activator activity (ortholog); kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN hippo signaling (ortholog); regulation of protein autophosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 11 2218832 2255635 + 30032202 116912107 MODEL JAAIVD010000006;XM_032916006 XP_032771897 protein-coding 626012099 Nfat5 nuclear factor of activated T cells 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); DNA damage response (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autoimmune disease of gastrointestinal tract (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 27017478 27098664 + 22301074;30032202 116886562 MODEL JAAIVD010000011;XM_032888079 XP_032743970 nuclear factor of activated T-cells 5 protein-coding 626012119 LOC116894287 tetraspanin-7-like 2 131713325 131714687 - 22301074;30032202 116894287 MODEL JAAIVD010000001;XM_032895995 XP_032751886 protein-coding 626012124 LOC116908484 homeobox protein Hox-B5 9 58077956 58091388 - 22301074;30032202 116908484 MODEL JAAIVD010000002;XM_032911639;XM_032911640 XP_032767530;XP_032767531 homeobox protein Hox-B6 protein-coding 626012136 Eri3 ERI1 exoribonuclease family member 3 1 41157559 41283089 + 22301074;30032202 116898729 MODEL JAAIVD010000025;XM_032900040;XM_032900047;XM_032900054;XM_032900062;XM_032900070;XM_032900077;XM_032900087;XM_032900095 XP_032755931;XP_032755938;XP_032755945;XP_032755953;XP_032755961;XP_032755968;XP_032755978;XP_032755986 ERI1 exoribonuclease 3 protein-coding 626012166 Klkb1 kallikrein B1 INVOLVED IN liver regeneration (ortholog); plasminogen activation (ortholog); positive regulation of fibrinolysis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH carotid artery thrombosis (ortholog); Diabetic Nephropathies (ortholog); Enterocolitis (ortholog); FOUND IN extracellular space (ortholog) 13 42549062 42577125 + 22301074 116914622 MODEL JAAIVD010000008;XM_032918986 XP_032774877 plasma kallikrein protein-coding 626012185 LOC116890628 U2 spliceosomal RNA 1 254713577 254713766 - 116890628 MODEL JAAIVD010000025;XR_004386773 snrna 626012188 LOC116913104 glutaredoxin-1-like 12 31030803 31031130 + 116913104 MODEL JAAIVD010000007;XM_032917245 XP_032773136 protein-coding 626012191 Rasl12 RAS like family 12 8 59707241 59720858 + 22301074 116907315 MODEL JAAIVD010000027;XM_032910260 XP_032766151 ras-like protein family member 12 protein-coding 626012200 Ndufb6 NADH:ubiquinone oxidoreductase subunit B6 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); ASSOCIATED WITH Hypertriglyceridemia (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 117922762 117932726 + 22301074;30032202 116902675 MODEL JAAIVD010000025;XM_032905039 XP_032760930 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 6 protein-coding 626012208 LOC116906337 U6 spliceosomal RNA 7 106821711 106821813 - 116906337 MODEL JAAIVD010000026;XR_004388619 snrna 626012211 Ccdc88b coiled-coil and HOOK domain protein 88B INVOLVED IN defense response to protozoan (ortholog); positive regulation of cytokine production (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH leprosy (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); membrane (ortholog) 2 937324 952799 + 22301074;30032202 116894822 MODEL JAAIVD010000001;XM_032896495 XP_032752386 coiled-coil domain containing 88B;coiled-coil domain-containing protein 88B protein-coding 626012242 Ca7 carbonic anhydrase 7 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); INVOLVED IN neuron cellular homeostasis (ortholog); positive regulation of cellular pH reduction (ortholog); positive regulation of synaptic transmission, GABAergic (ortholog); FOUND IN cytosol (ortholog) 17 12818146 12826890 + 22301074;30032202 116886481 MODEL JAAIVD010000011;XM_032887983 XP_032743874 protein-coding 626012253 Pdk1 pyruvate dehydrogenase kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); hypoxia-inducible factor-1alpha signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Fc epsilon receptor mediated signaling pathway; pyruvate metabolic pathway; FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) 5 49170502 49199496 + 30032202 116901510 MODEL JAAIVD010000023;XM_032903481;XM_032903482;XR_004388004 XP_032759372;XP_032759373 pyruvate dehydrogenase (acetyl-transferring) kinase isozyme 1, mitochondrial protein-coding 626012277 Crabp1 cellular retinoic acid binding protein 1 ENCODES a protein that exhibits retinoic acid binding (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); Keloid (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 8 48833872 48842073 + 30032202 116906912 MODEL JAAIVD010000027;XM_032909832 XP_032765723 cellular retinoic acid-binding protein 1 protein-coding 626012285 Tnfrsf19 TNF receptor superfamily member 19 INVOLVED IN hair follicle development (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH melanoma (ortholog); Nasopharyngeal Neoplasms (ortholog) 12 63390079 63480488 + 22301074;30032202 116913669 MODEL JAAIVD010000007;XM_032917956 XP_032773847 tumor necrosis factor receptor superfamily member 19 protein-coding 626012300 LOC116900473 olfactory receptor 4A47-like 5 71486002 71486934 - 22301074 116900473 MODEL JAAIVD010000023;XM_032902208 XP_032758099 protein-coding 626012304 Rhoh ras homolog family member H ENCODES a protein that exhibits GTP binding (ortholog); kinase inhibitor activity (ortholog); INVOLVED IN mast cell activation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH coronin-1A deficiency (ortholog); immunodeficiency 129 (ortholog); FOUND IN cytoplasm (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) 11 22960673 22961918 + 22301074;30032202 116911931 MODEL JAAIVD010000006;XM_032915822 XP_032771713 rho-related GTP-binding protein RhoH protein-coding 626012309 LOC116914663 disintegrin and metalloproteinase domain-containing protein 5 13 61637702 61713481 + 22301074;30032202 116914663 MODEL JAAIVD010000008;XM_032919065;XM_032919066 XP_032774956;XP_032774957 protein-coding 626012340 Exosc10 exosome component 10 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN CUT catabolic process (ortholog); histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) 1 12189735 12212971 - 22301074;30032202 116892781 MODEL JAAIVD010000025;XM_032894657 XP_032750548 protein-coding 626012369 LOC116888184 high mobility group protein B4-like X 119910372 119910785 - 30032202 116888184 MODEL JAAIVD010000014;XM_032889500 XP_032745391 protein-coding 626012372 LOC116890541 small nucleolar RNA SNORA17 1 2107299 2107425 + 116890541 MODEL JAAIVD010000025;XR_004386721 snorna 626012375 LOC116888250 EKC/KEOPS complex subunit LAGE3-like X 128026141 128027263 + 30032202 116888250 MODEL JAAIVD010000014;XM_032889534 XP_032745425 protein-coding 626012380 Stxbp2 syntaxin binding protein 2 ENCODES a protein that exhibits syntaxin binding (ortholog); syntaxin-1 binding (ortholog); syntaxin-3 binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); exocytosis (ortholog); leukocyte mediated cytotoxicity (ortholog); ASSOCIATED WITH blood platelet disease (ortholog); carotid artery thrombosis (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); azurophil granule (ortholog); cytolytic granule (ortholog) 16 1555867 1566569 + 22301074;30032202 116885840 MODEL JAAIVD010000004;XM_032887179 XP_032743070 syntaxin-binding protein 2 protein-coding 626012402 LOC116888625 elongation factor 1-gamma-like X 52176528 52177864 - 116888625 MODEL JAAIVD010000014;XR_004386329 pseudo 626012405 LOC116887565 60S ribosomal protein L11-like 18 29541070 29542468 - 116887565 MODEL JAAIVD010000013 pseudo 626012406 Prdm11 PR/SET domain 11 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 5 67141803 67215232 - 22301074 116901648 MODEL JAAIVD010000023;XM_032903753;XM_032903754;XM_032903755 XP_032759644;XP_032759645;XP_032759646 PR domain-containing protein 11 protein-coding 626012424 LOC116885336 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 1 28717328 28717840 - 116885336 MODEL JAAIVD010000025 pseudo 626012425 LOC116910529 keratin-associated protein 3-2-like 9 54389489 54389788 - 22301074;30032202 116910529 MODEL JAAIVD010000002;XM_032914432 XP_032770323 protein-coding 626012428 Ocln occludin ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cell-cell junction organization (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); allergic rhinitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 3 157902627 157949884 - 22301074;30032202 116897092 MODEL JAAIVD010000012;XM_032898729 XP_032754620 protein-coding 626012441 Rnf121 ring finger protein 121 2 100304287 100360141 - 30032202 116891779 MODEL JAAIVD010000001;XM_032893121 XP_032749012 protein-coding 626012454 Cct5 chaperonin containing TCP1 subunit 5 ENCODES a protein that exhibits beta-tubulin binding (ortholog); G-protein beta-subunit binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cell body (ortholog); centrosome (ortholog); chaperonin-containing T-complex (ortholog) 3 149221697 149232757 + 22301074;30032202 116897048 MODEL JAAIVD010000012;XM_032898671 XP_032754562 T-complex protein 1 subunit epsilon protein-coding 626012469 LOC116895602 solute carrier family 7 member 13-like 3 156445815 156461030 - 22301074;30032202 116895602 MODEL JAAIVD010000012;XM_032896820 XP_032752711 protein-coding 626012476 LOC116912630 40S ribosomal protein S2-like 11 21499698 21500663 - 1939063;22301074;30032202 116912630 MODEL JAAIVD010000006;X57432;XM_032916748 CAA40679;XP_032772639 ribosomal protein S2 protein-coding 626012481 LOC116911814 small nucleolar RNA SNORA28 10 72620986 72621116 - 116911814 MODEL JAAIVD010000005;XR_004389353 snorna 626012484 Gabrb1 gamma-aminobutyric acid type A receptor subunit beta1 ENCODES a protein that exhibits G protein-coupled neurotransmitter receptor activity involved in regulation of presynaptic membrane potential (ortholog); GABA receptor binding (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); central nervous system neuron development (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autistic disorder (ortholog); depressive disorder (ortholog); FOUND IN dendrite (ortholog); GABA-A receptor complex (ortholog); GABA-ergic synapse (ortholog) 11 28535046 28957734 + 22301074;30032202 116912176 MODEL JAAIVD010000006;XM_032916107 XP_032771998 gamma-aminobutyric acid receptor subunit beta-1 protein-coding 626012497 LOC116887115 keratin-associated protein 12-1-like 18 1074994 1075368 - 22301074 116887115 MODEL JAAIVD010000013;XM_032888658;XM_032888659;XM_032888660 XP_032744549;XP_032744550;XP_032744551 protein-coding 626012507 LOC116900660 uncharacterized LOC116900660 5 123830870 123832076 - 116900660 MODEL JAAIVD010000023;XR_004387944 ncrna 626012511 LOC116883813 uncharacterized LOC116883813 1 261874540 261876573 + 116883813 MODEL JAAIVD010000025;XR_004385793 ncrna 626012515 Dynll1 dynein light chain LC8-type 1 ENCODES a protein that exhibits deoxyribonuclease inhibitor activity (ortholog); dynein intermediate chain binding (ortholog); enzyme binding (ortholog); INVOLVED IN DNA strand resection involved in replication fork processing (ortholog); intraciliary retrograde transport (ortholog); mitocytosis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH brain ischemia (ortholog); cardiac arrest (ortholog); congestive heart failure (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); COP9 signalosome (ortholog) 16 38522286 38524688 + 22301074;30032202 116885969 MODEL JAAIVD010000004;XM_032887306 XP_032743197 dynein light chain 1, cytoplasmic protein-coding 626012522 LOC116902874 prolactin-inducible protein homolog 6 98540337 98544401 + 22301074;30032202 116902874 MODEL JAAIVD010000024;XM_032905205 XP_032761096 protein-coding 626012528 Ralbp1 ralA binding protein 1 ENCODES a protein that exhibits ATPase-coupled transmembrane transporter activity (ortholog); GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN doxorubicin transport (ortholog); endocytosis (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; vinblastine pharmacodynamics pathway; vincristine pharmacodynamics pathway; ASSOCIATED WITH hypertension (ortholog); microphthalmia (ortholog); Myocardial Ischemia (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 4 175839086 175858348 - 30032202 116899698 MODEL JAAIVD010000003;XM_032901722 XP_032757613 ralA-binding protein 1 protein-coding 626012542 LOC116902599 small nucleolar RNA SNORA17 5 140283368 140283498 + 116902599 MODEL JAAIVD010000023;XR_004388188 snorna 626012545 Slc23a3 solute carrier family 23 member 3 INVOLVED IN hypoxanthine transport (ortholog) 4 148485781 148495361 - 22301074 116899519 MODEL JAAIVD010000003;XM_032901377 XP_032757268 protein-coding 626012562 LOC116905574 cytochrome b-c1 complex subunit 7-like 7 97333954 97334688 + 116905574 MODEL JAAIVD010000026 pseudo 626012563 Aff3 ALF transcription elongation factor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN embryonic hindlimb morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); response to tumor necrosis factor (ortholog); ASSOCIATED WITH genetic disease (ortholog); KINSSHIP syndrome (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 4 114366660 114830891 - 22301074;30032202 116899310 MODEL JAAIVD010000003;XM_032900975 XP_032756866 AF4/FMR2 family member 3 protein-coding 626012591 LOC116913105 60S ribosomal protein L37 12 31443784 31444172 - 22301074;30032202 116913105 MODEL JAAIVD010000007;XM_032917246 XP_032773137 protein-coding 626012596 LOC116890271 PRAME family member 12-like 1 14635200 14637784 - 22301074;30032202 116890271 MODEL JAAIVD010000025;XM_032890989 XP_032746880 protein-coding 626012601 Maoa monoamine oxidase A ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); monoamine oxidase activity (ortholog); primary methylamine oxidase activity (ortholog); INVOLVED IN dopamine catabolic process (ortholog); phenylethylamine metabolic process (ortholog); positive regulation of signal transduction (ortholog); PARTICIPATES IN alkaptonuria pathway; citalopram pharmacodynamics pathway; citalopram pharmacokinetics pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); antisocial personality disorder (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) X 4968342 5035254 + 22301074 116888390 MODEL JAAIVD010000014;XM_032889664 XP_032745555 amine oxidase [flavin-containing] A protein-coding 626012620 Trafd1 TRAF-type zinc finger domain containing 1 INVOLVED IN negative regulation of innate immune response (ortholog); response to cytokine (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 16 32432834 32446706 + 22301074 116885373 MODEL JAAIVD010000004;XM_032886648 XP_032742539 TRAF-type zinc finger domain-containing protein 1 protein-coding 626012636 LOC116900148 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase-like 5 16427586 16429195 + 116900148 MODEL JAAIVD010000023 pseudo 626012637 Osbpl7 oxysterol binding protein like 7 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); encephalopathy due to defective mitochondrial and peroxisomal fission 1 (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 57319874 57337402 - 30032202 116909288 MODEL JAAIVD010000002;XM_032912826 XP_032768717 oxysterol-binding protein-related protein 7 protein-coding 626012664 LOC116889311 uncharacterized LOC116889311 X 44427137 44429536 + 30032202 116889311 MODEL JAAIVD010000014;XM_032890430 XP_032746321 uncharacterized protein LOC116889311 protein-coding 626012669 Ephx2 epoxide hydrolase 2 ENCODES a protein that exhibits epoxide hydrolase activity (ortholog); lipid phosphatase activity (ortholog); lysophosphatidic acid phosphatase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); dephosphorylation (ortholog); epoxide metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) 12 58334461 58377486 + 30032202 116913682 MODEL JAAIVD010000007;XM_032917970 XP_032773861 bifunctional epoxide hydrolase 2 protein-coding 626012692 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41356104 41356185 + 116884239 MODEL JAAIVD010000009 trna 626012693 LOC116900165 T-complex protein 1 subunit gamma-like 5 29065165 29066807 + 116900165 MODEL JAAIVD010000023;XR_004387922 pseudo 626012696 LOC116900784 seminal vesicle secretory protein 6-like 5 153678925 153680591 - 30032202 116900784 MODEL JAAIVD010000023;XM_032902494 XP_032758385 protein-coding 626012704 Ccdc15 coiled-coil domain containing 15 INVOLVED IN cilium assembly (ortholog); positive regulation of centriole elongation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 8 33459027 33532961 - 30032202 116907771 MODEL JAAIVD010000027;XM_032910912 XP_032766803 coiled-coil domain-containing protein 15 protein-coding 626012724 C1H6orf163 chromosome 1 C6orf163 homolog 1 63173179 63183455 + 116900321 MODEL JAAIVD010000025;XM_032902081 XP_032757972 uncharacterized protein C6orf163 homolog protein-coding 626012733 LOC116901109 COMM domain-containing protein 2-like 1 79229672 79230801 - 116901109 MODEL JAAIVD010000025 pseudo 626012734 Znf275 zinc finger protein 275 X 128965834 128982333 + 116888578 MODEL JAAIVD010000014;XM_032889879 XP_032745770 protein-coding 626012744 LOC116884699 zinc finger protein 709-like 15 34618619 34624705 + 22301074;30032202 116884699 MODEL JAAIVD010000010;XM_032885885;XM_032885886;XM_032885887 XP_032741776;XP_032741777;XP_032741778 protein-coding 626012756 Pomt1 protein O-mannosyltransferase 1 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of protein O-linked glycosylation (ortholog); protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2K (ortholog); FOUND IN acrosomal vesicle (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); endoplasmic reticulum membrane (ortholog) 5 3382991 3401965 - 22301074 116901154 MODEL JAAIVD010000023;XM_032902795 XP_032758686 protein O-mannosyl-transferase 1 protein-coding 626012780 Pcdhb1 protocadherin beta 1 ASSOCIATED WITH prostate cancer (ortholog) 15 857714 860170 + 22301074 116884267 MODEL JAAIVD010000010;XM_032885351 XP_032741242 protocadherin beta-1 protein-coding 626012783 LOC116905816 17-beta-hydroxysteroid dehydrogenase type 6 1 155468423 155477529 - 22301074 116905816 MODEL JAAIVD010000025;XM_032908786 XP_032764677 protein-coding 626012791 LOC116884322 contactin-6 15 67995187 68199571 + 30032202 116884322 MODEL JAAIVD010000010;XM_032885455 XP_032741346 protein-coding 626012816 Ptrhd1 peptidyl-tRNA hydrolase domain containing 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); NEURODEVELOPMENTAL DISORDER WITH EARLY-ONSET PARKINSONISM AND BEHAVIORAL ABNORMALITIES (ortholog); Parkinsonism (ortholog); FOUND IN mitochondrion (ortholog) 7 24894873 24897955 + 22301074 116906025 MODEL JAAIVD010000026;XM_032909085 XP_032764976 putative peptidyl-tRNA hydrolase PTRHD1 protein-coding 626012822 LOC116905616 60S ribosomal protein L17-like 7 17114488 17115019 - 116905616 MODEL JAAIVD010000026 pseudo 626012823 Tm7sf3 transmembrane 7 superfamily member 3 INVOLVED IN cellular response to unfolded protein (ortholog); negative regulation of programmed cell death (ortholog); positive regulation of insulin secretion (ortholog); FOUND IN plasma membrane (ortholog) 6 4280261 4311571 - 116903090 MODEL JAAIVD010000024;XM_032905411 XP_032761302 protein-coding 626012839 Rasgrp4 RAS guanyl releasing protein 4 ENCODES a protein that exhibits diacylglycerol binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of natural killer cell mediated immunity (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); membrane (ortholog) 2 166842763 166861196 - 22301074;30032202 116894465 MODEL JAAIVD010000001;XM_032896174;XM_032896175;XM_032896176 XP_032752065;XP_032752066;XP_032752067 RAS guanyl-releasing protein 4 protein-coding 626012865 Agfg2 ArfGAP with FG repeats 2 16 16339252 16375564 + 22301074 116885309 MODEL JAAIVD010000004;XM_032886567;XM_032886568;XM_032886569 XP_032742458;XP_032742459;XP_032742460 arf-GAP domain and FG repeat-containing protein 2 protein-coding 626012890 LOC116890595 small nucleolar RNA SNORA17 1 31487065 31487180 + 116890595 MODEL JAAIVD010000025 pseudo 626012891 Marcksl1 MARCKS like 1 INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of presynaptic cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Seizures (ortholog); FOUND IN plasma membrane (ortholog); presynaptic cytosol (ortholog); presynaptic membrane (ortholog) 1 28637369 28639729 - 22301074;30032202 116896125 MODEL JAAIVD010000025;XM_032897110 XP_032753001 MARCKS-related protein protein-coding 626012897 Raf1 Raf-1 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); ATP binding (ortholog); INVOLVED IN cell differentiation (ortholog); death-inducing signaling complex assembly (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); PARTICIPATES IN altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; ceramide signaling pathway; endothelin signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 6 31033135 31093754 + 22301074;30032202 116903379 MODEL JAAIVD010000024;XM_032905868;XM_032905869;XM_032905870;XM_032905871 XP_032761759;XP_032761760;XP_032761761;XP_032761762 RAF proto-oncogene serine/threonine-protein kinase protein-coding 626012927 LOC116884809 uncharacterized LOC116884809 15 10537872 10538872 - 116884809 MODEL JAAIVD010000010;XR_004385897 ncrna 626012932 LOC116903636 protein disulfide-isomerase A6-like 6 119902324 119903635 - 116903636 MODEL JAAIVD010000024 pseudo 626012933 Cdc73 cell division cycle 73 ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); colorectal cancer (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 23534471 23625982 - 30032202 116911112 MODEL JAAIVD010000005;XM_032914953 XP_032770844 parafibromin protein-coding 626012954 LOC116894025 olfactory receptor 51B6-like 2 102011964 102012917 + 22301074 116894025 MODEL JAAIVD010000001;XM_032895741 XP_032751632 protein-coding 626012957 LOC116897962 metastasis-associated protein MTA2-like 4 20454201 20456376 + 116897962 MODEL JAAIVD010000003 pseudo 626012958 Otogl otogelin like INVOLVED IN inner ear receptor cell stereocilium organization (ortholog); intracellular protein localization (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 84B (ortholog); genetic disease (ortholog) 1 186016206 186153480 - 22301074;30032202 116914296 MODEL JAAIVD010000025;XM_032918557 XP_032774448 otogelin-like protein protein-coding 626013020 LOC116888213 40S ribosomal protein S15a-like X 128281958 128282352 + 116888213 MODEL JAAIVD010000014 pseudo 626013021 LOC116910023 tax1-binding protein 3-like 9 49750344 49751378 + 22301074;30032202 116910023 MODEL JAAIVD010000002;XM_032913807 XP_032769698 protein-coding 626013025 LOC116909396 olfactory receptor 10 9 31991209 31992176 + 22301074 116909396 MODEL JAAIVD010000002;XM_032912956 XP_032768847 protein-coding 626013029 Ttc3 tetratricopeptide repeat domain 3 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of neuron differentiation (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH Frontotemporal Dementia and/or Amyotrophic Lateral Sclerosis (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 4 50171755 50271146 - 22301074;30032202 116898965 MODEL JAAIVD010000003;XM_032900389 XP_032756280 E3 ubiquitin-protein ligase TTC3 protein-coding 626013079 Hspb3 heat shock protein family B (small) member 3 ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 4 (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 3 183139783 183141016 + 30032202 116895648 MODEL JAAIVD010000012;XM_032896853 XP_032752744 heat shock protein beta-3 protein-coding 626013084 Endou endonuclease, poly(U) specific ENCODES a protein that exhibits RNA binding (ortholog); RNA endonuclease activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); negative regulation of lipid catabolic process (ortholog); post-transcriptional gene silencing (ortholog); FOUND IN cytoplasm (ortholog) 1 270528620 270548283 - 22301074;30032202 116890447 MODEL JAAIVD010000025;XM_032891007 XP_032746898 poly(U)-specific endoribonuclease protein-coding 626013098 Spred3 sprouty related EVH1 domain containing 3 INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of lens fiber cell differentiation (ortholog); FOUND IN plasma membrane (ortholog) 2 166824567 166835920 + 22301074;30032202 116892362 MODEL JAAIVD010000001;XM_032894018;XM_032894019;XM_032894020 XP_032749909;XP_032749910;XP_032749911 sprouty-related, EVH1 domain-containing protein 3 protein-coding 626013115 Lmntd1 lamin tail domain containing 1 INVOLVED IN cell population proliferation (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog); nucleus (ortholog) 6 3160178 3189816 - 30032202 116904507 MODEL JAAIVD010000024;XM_032907297 XP_032763188 lamin tail domain-containing protein 1 protein-coding 626013125 LOC116904813 U6 spliceosomal RNA 6 136927609 136927715 + 116904813 MODEL JAAIVD010000024;XR_004388464 snrna 626013128 LOC116913827 uncharacterized LOC116913827 12 87429553 87435691 - 116913827 MODEL JAAIVD010000007;XR_004389644 ncrna 626013132 Slc16a7 solute carrier family 16 member 7 ENCODES a protein that exhibits identical protein binding (ortholog); lactate transmembrane transporter activity (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lactate transmembrane transport (ortholog); plasma membrane lactate transport (ortholog); pyruvate transmembrane transport (ortholog); ASSOCIATED WITH obesity (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog) 1 203715019 203868751 - 22301074;30032202 116909679 MODEL JAAIVD010000025;XM_032913342;XM_032913350;XM_032913358;XM_032913367;XM_032913374 XP_032769233;XP_032769241;XP_032769249;XP_032769258;XP_032769265 monocarboxylate transporter 2 protein-coding 626013152 Lrat lecithin retinol acyltransferase ENCODES a protein that exhibits O-acyltransferase activity (ortholog); O-palmitoyltransferase activity (ortholog); phosphatidylcholine-retinol O-acyltransferase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); lipid storage (ortholog); positive regulation of lipid transport (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoic acid metabolic pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); celiac disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endoplasmic reticulum (ortholog); multivesicular body (ortholog); perinuclear region of cytoplasm (ortholog) 3 70600455 70606464 + 30032202 116895443 MODEL JAAIVD010000012;XM_032896722 XP_032752613 protein-coding 626013158 Psmf1 proteasome inhibitor subunit 1 ENCODES a protein that exhibits proteasome binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 5 131095357 131117495 - 30032202 116902107 MODEL JAAIVD010000023;XM_032904417;XM_032904418 XP_032760308;XP_032760309 proteasome inhibitor PI31 subunit protein-coding 626013173 Sowahc sosondowah ankyrin repeat domain family member C 18 25173740 25176991 + 22301074 116886894 MODEL JAAIVD010000013;XM_032888356 XP_032744247 ankyrin repeat domain-containing protein SOWAHC protein-coding 626013178 Ptpn11 protein tyrosine phosphatase non-receptor type 11 ENCODES a protein that exhibits cadherin binding (ortholog); cell adhesion molecule binding (ortholog); D1 dopamine receptor binding (ortholog); INVOLVED IN atrioventricular canal development (ortholog); axonogenesis (ortholog); Bergmann glial cell differentiation (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 16 32634535 32694293 + 22301074 116885154 MODEL JAAIVD010000004;XM_032886360;XM_032886361 XP_032742251;XP_032742252 tyrosine-protein phosphatase non-receptor type 11 protein-coding 626013200 LOC116895458 phosphoglycerate mutase 1-like 3 80626154 80626990 - 116895458 MODEL JAAIVD010000012 pseudo 626013201 LOC116885893 COBW domain-containing protein 1-like 16 15180967 15182358 - 116885893 MODEL JAAIVD010000004 pseudo 626013202 Pvrig PVR related immunoglobulin domain containing ENCODES a protein that exhibits phosphatase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 16 15930532 15953441 - 30032202 116885829 MODEL JAAIVD010000004;XM_032887174 XP_032743065 transmembrane protein PVRIG protein-coding 626013213 Syt5 synaptotagmin 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); clathrin binding (ortholog); INVOLVED IN regulation of calcium ion-dependent exocytosis (ortholog); FOUND IN dense core granule (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) 2 177139790 177147653 - 30032202 116892655 MODEL JAAIVD010000001;XM_032894478;XM_032894479 XP_032750369;XP_032750370 synaptotagmin-5 protein-coding 626013230 LOC116911532 40S ribosomal protein S3a-like 10 54190828 54191789 + 116911532 MODEL JAAIVD010000005 pseudo 626013231 LOC116905329 probable ATP-dependent RNA helicase DDX41 7 101833099 101835141 + 22301074;30032202 116905329 MODEL JAAIVD010000026;XM_032908225 XP_032764116 protein-coding 626013236 LOC116889018 protein dpy-30 homolog 1 114599935 114600646 - 116889018 MODEL JAAIVD010000025 pseudo 626013237 LOC116884955 AKT-interacting protein-like 15 31423661 31427278 - 116884955 MODEL JAAIVD010000010 pseudo 626013238 LOC116885092 U6 spliceosomal RNA 15 74200202 74200305 + 116885092 MODEL JAAIVD010000010;XR_004385961 snrna 626013241 LOC116890058 uncharacterized LOC116890058 1 210587963 210594997 + 116890058 MODEL JAAIVD010000025;XR_004386526 ncrna 626013246 LOC116910751 U2 spliceosomal RNA 9 55919327 55919517 + 116910751 MODEL JAAIVD010000002;XR_004389264 snrna 626013249 LOC116888216 PWWP domain-containing DNA repair factor 3A-like X 128931784 128937207 + 116888216 MODEL JAAIVD010000014 pseudo 626013250 Hmgn3 high mobility group nucleosomal binding domain 3 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 77283378 77320021 - 22301074;30032202 116906814 MODEL JAAIVD010000027;XM_032909691;XM_032909692;XM_032909693 XP_032765582;XP_032765583;XP_032765584 high mobility group nucleosome-binding domain-containing protein 3 protein-coding 626013270 Znf354c zinc finger protein 354C ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of sprouting angiogenesis (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 9 33467919 33474894 - 30032202 116908591 MODEL JAAIVD010000002;XM_032911810 XP_032767701 protein-coding 626013277 Smg5 SMG5 nonsense mediated mRNA decay factor ENCODES a protein that exhibits histone deacetylase binding (ortholog); protein phosphatase 2A binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN regulation of dephosphorylation (ortholog); regulation of telomere maintenance (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleus (ortholog) 3 65188729 65217689 - 22301074;30032202 116896691 MODEL JAAIVD010000012;XM_032898083 XP_032753974 protein SMG5 protein-coding 626013303 LOC116883500 glyceraldehyde-3-phosphate dehydrogenase-like 14 53627624 53628623 - 116883500 MODEL JAAIVD010000009 pseudo 626013304 LOC116900405 olfactory receptor 4C11-like 5 70112201 70113130 + 22301074 116900405 MODEL JAAIVD010000023;XM_032902151 XP_032758042 protein-coding 626013307 LOC116889708 L-lactate dehydrogenase-like 22301074 116889708 MODEL JAAIVD010000059;XM_032890590 XP_032746481 protein-coding 626013308 Znf48 zinc finger protein 48 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 2 74649322 74654583 - 116891482 MODEL JAAIVD010000001;XM_032892585 XP_032748476 protein-coding 626013314 LOC116907530 transmembrane protein 92-like 1 165059133 165059803 + 116907530 MODEL JAAIVD010000025 pseudo 626013315 LOC116893308 zinc finger protein 431-like 2 151769285 151785462 + 22301074 116893308 MODEL JAAIVD010000001;XM_032895135 XP_032751026 protein-coding 626013322 Wnt5a Wnt family member 5A ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); cytokine activity (ortholog); frizzled binding (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); anterior/posterior pattern specification (ortholog); atrial septum development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); colon cancer (ortholog); Dwarfism (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 13 4252297 4270528 + 22301074;30032202 116914699 MODEL JAAIVD010000008;XM_032919121;XM_032919122;XM_032919123 XP_032775012;XP_032775013;XP_032775014 protein Wnt-5a protein-coding 626013336 LOC116895060 small nucleolar RNA SNORA17 2 47237683 47237772 + 116895060 MODEL JAAIVD010000001 pseudo 626013337 Tfap4 transcription factor AP-4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 17326425 17342917 + 22301074;30032202 116909711 MODEL JAAIVD010000002;XM_032913380;XM_032913381;XM_032913382 XP_032769271;XP_032769272;XP_032769273 protein-coding 626013354 Dnajb9 DnaJ heat shock protein family (Hsp40) member B9 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); misfolded protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN B cell differentiation (ortholog); ERAD pathway (ortholog); positive regulation of immunoglobulin production (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 7 57846240 57850509 - 30032202 116905005 MODEL JAAIVD010000026;XM_032907690 XP_032763581 dnaJ homolog subfamily B member 9 protein-coding 626013361 Fitm2 fat storage inducing transmembrane protein 2 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); diacylglycerol binding (ortholog); triglyceride binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); fat cell differentiation (ortholog); fatty-acyl-CoA catabolic process (ortholog); ASSOCIATED WITH Siddiqi syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 5 154494116 154497992 + 22301074;30032202 116902381 MODEL JAAIVD010000023;XM_032904892 XP_032760783 fat storage-inducing transmembrane protein 2 protein-coding 626013367 Pskh1 protein serine kinase H1 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH Progressive Familial Intrahepatic Cholestasis 13 (ortholog); FOUND IN cilium (ortholog); cytosol (ortholog); nuclear speck (ortholog) 17 25641010 25670293 + 22301074 116886280 MODEL JAAIVD010000011;XM_032887707 XP_032743598 serine/threonine-protein kinase H1 protein-coding 626013374 LOC116915071 POTE ankyrin domain family member A-like 13 59117261 59147670 - 22301074 116915071 MODEL JAAIVD010000008;XM_032919486 XP_032775377 protein-coding 626013390 Dpf3 double PHD fingers 3 INVOLVED IN muscle cell differentiation (ortholog); nervous system development (ortholog); PARTICIPATES IN histone modification pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN nBAF complex (ortholog); nucleoplasm (ortholog) 7 97317366 97591398 - 30032202 116905246 MODEL JAAIVD010000026;XM_032908086;XM_032908087;XM_032908088;XM_032908089 XP_032763977;XP_032763978;XP_032763979;XP_032763980 zinc finger protein DPF3 protein-coding 626013416 Emcn endomucin ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH thyroid gland carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 3 21688617 21781257 - 116896217 MODEL JAAIVD010000012;XM_032897272 XP_032753163 protein-coding 626013433 Znf213 zinc finger protein 213 9 873340 880044 - 22301074 116909373 MODEL JAAIVD010000002;XM_032912925;XM_032912926;XM_032912927 XP_032768816;XP_032768817;XP_032768818 protein-coding 626013447 LOC116912014 protein BEX4-like 11 62349400 62349777 - 116912014 MODEL JAAIVD010000006 pseudo 626013448 LOC116893513 parkin coregulated gene protein-like 2 189584256 189645053 - 30032202 116893513 MODEL JAAIVD010000001;XM_032895246 XP_032751137 protein-coding 626013454 Gml glycosylphosphatidylinositol anchored molecule like ASSOCIATED WITH autistic disorder (ortholog) 1 247554339 247558929 + 116890135 MODEL JAAIVD010000025;XM_032890872 XP_032746763 glycosyl-phosphatidylinositol-anchored molecule-like protein protein-coding 626013461 LOC116901035 sperm motility kinase X-like 5 130231929 130235180 - 22301074;30032202 116901035 MODEL JAAIVD010000023;XM_032902619 XP_032758510 protein-coding 626013466 LOC116897380 U4 spliceosomal RNA 3 157952883 157953012 - 116897380 MODEL JAAIVD010000012 pseudo 626013467 Amotl1 angiomotin like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN establishment of cell polarity involved in ameboidal cell migration (ortholog); positive regulation of blood vessel endothelial cell migration (ortholog); ASSOCIATED WITH Craniofaciocardiohepatic syndrome (ortholog); Disease Progression (ortholog); high grade glioma (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); COP9 signalosome (ortholog) 8 10328205 10393754 - 30032202 116907783 MODEL JAAIVD010000027;XM_032910924;XM_032910925 XP_032766815;XP_032766816 angiomotin-like protein 1 protein-coding 626013486 Pim3 Pim-3 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to forskolin (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN cytosol (ortholog) 1 258185532 258189294 + 22301074;30032202 116914862 MODEL JAAIVD010000025;XM_032919312 XP_032775203 serine/threonine-protein kinase pim-3 protein-coding 626013496 LOC116892154 lutropin subunit beta 2 154087801 154088633 - 22301074;30032202 116892154 MODEL JAAIVD010000001;XM_032893648 XP_032749539 protein-coding 626013502 Polr3a RNA polymerase III subunit A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); INVOLVED IN innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); tRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 4 (ortholog); hypomyelinating leukodystrophy 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 609864 653600 - 22301074;30032202 116914438 MODEL JAAIVD010000008;XM_032918737 XP_032774628 DNA-directed RNA polymerase III subunit RPC1 protein-coding 626013537 Nap1l5 nucleosome assembly protein 1 like 5 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 6 83000779 83002662 + 22301074;30032202 116903727 MODEL JAAIVD010000024;XM_032906408 XP_032762299 nucleosome assembly protein 1-like 5 protein-coding 626013543 LOC116898294 PCNA-associated factor-like 4 181609264 181609590 + 116898294 MODEL JAAIVD010000003 pseudo 626013544 Kank1 KN motif and ankyrin repeat domains 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); cortical microtubule organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 2 25512953 25540375 + 22301074;30032202 116891055 MODEL JAAIVD010000001;XM_032891749 XP_032747640 KN motif and ankyrin repeat domain-containing protein 1 protein-coding 626013559 LOC116902185 ubiquinol-cytochrome-c reductase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN cytoplasmic vesicle (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 135202878 135292671 - 30032202 116902185 MODEL JAAIVD010000023;XM_032904548;XM_032904550;XM_032904551 XP_032760439;XP_032760441;XP_032760442 protein-coding 626013580 Nktr natural killer cell triggering receptor ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog) 8 112878275 112914843 + 22301074;30032202 116907976 MODEL JAAIVD010000027;XM_032911208;XM_032911209;XM_032911210;XM_032911211;XM_032911212;XM_032911213;XM_032911214;XM_032911215;XR_004388862;XR_004388863 XP_032767099;XP_032767100;XP_032767101;XP_032767102;XP_032767103;XP_032767104;XP_032767105;XP_032767106 NK-tumor recognition protein protein-coding 626013627 LOC116895419 protein S100-A15A 3 62953173 62958213 - 22301074;30032202 116895419 MODEL JAAIVD010000012;XM_032896701 XP_032752592 protein-coding 626013634 Josd2 Josephin domain containing 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); FOUND IN cytoplasm (ortholog) 2 155061437 155065066 - 22301074;30032202 116892211 MODEL JAAIVD010000001;XM_032893766;XM_032893767;XM_032893769;XM_032893770 XP_032749657;XP_032749658;XP_032749660;XP_032749661 josephin-2 protein-coding 626013651 LOC116904824 U6 spliceosomal RNA 6 27360700 27360787 + 116904824 MODEL JAAIVD010000024 pseudo 626013652 LOC116908542 reticulocalbin-1-like 1 159320640 159322907 + 116908542 MODEL JAAIVD010000025 pseudo 626013653 Cinp cyclin dependent kinase 2 interacting protein ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog) 7 128438330 128452453 - 116905482 MODEL JAAIVD010000026;XM_032908480 XP_032764371 cyclin-dependent kinase 2-interacting protein protein-coding 626013662 Mcl1 MCL1 apoptosis regulator, BCL2 family member ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); DNA damage response (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; interleukin-6 signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); colon cancer (ortholog); colorectal cancer (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 61612607 61617028 - 30032202 116896541 MODEL JAAIVD010000012;XM_032897730 XP_032753621 induced myeloid leukemia cell differentiation protein Mcl-1 protein-coding 626013669 Ubr7 ubiquitin protein ligase E3 component n-recognin 7 ASSOCIATED WITH Developmental Disabilities (ortholog); intellectual disability (ortholog); Li-Campeau Syndrome (ortholog) 7 114031224 114051427 + 22301074;30032202 116905360 MODEL JAAIVD010000026;XM_032908281 XP_032764172 putative E3 ubiquitin-protein ligase UBR7 protein-coding 626013684 LOC116912390 non-POU domain-containing octamer-binding protein-like 11 66544062 66545621 + 116912390 MODEL JAAIVD010000006 pseudo 626013685 LOC116898890 uncharacterized LOC116898890 4 35105445 35110730 - 116898890 MODEL JAAIVD010000003;XR_004387673 ncrna 626013689 LOC116889464 small nucleolar RNA SNORA70 X 14373740 14373876 + 116889464 MODEL JAAIVD010000014;XR_004386418 snorna 626013692 Scrt2 scratch family transcriptional repressor 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of neuron migration (ortholog); FOUND IN nucleus (ortholog) 5 131438667 131451039 + 30032202 116902113 MODEL JAAIVD010000023;XM_032904426 XP_032760317 transcriptional repressor scratch 2 protein-coding 626013698 Cenatac centrosomal AT-AC splicing factor INVOLVED IN chromosome separation (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of centrosome duplication (ortholog); ASSOCIATED WITH mosaic variegated aneuploidy syndrome 4 (ortholog); FOUND IN centrosome (ortholog) 8 38957015 38964545 - 116906582 MODEL JAAIVD010000027;XM_032909318;XM_032909319 XP_032765209;XP_032765210 Ccdc84 coiled-coil domain containing 84;coiled-coil domain-containing protein 84 protein-coding 626013715 LOC116902747 60S ribosomal protein L31-like 6 61802499 61802928 - 22301074;30032202 116902747 MODEL JAAIVD010000024;XM_032905094 XP_032760985 protein-coding 626013719 Samd8 sterile alpha motif domain containing 8 ENCODES a protein that exhibits ceramide phosphoethanolamine synthase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of ceramide biosynthetic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 12 91530558 91572331 + 22301074;30032202 116913142 MODEL JAAIVD010000007;XM_032917344;XM_032917345 XP_032773235;XP_032773236 sphingomyelin synthase-related protein 1 protein-coding 626013732 LOC116889261 THO complex subunit 4-like X 80343581 80344204 + 116889261 MODEL JAAIVD010000014 pseudo 626013733 LOC116904636 protein phosphatase 1 regulatory subunit 15B-like 6 30102312 30104419 - 116904636 MODEL JAAIVD010000024 pseudo 626013734 Sema4d semaphorin 4D ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN bone trabecula morphogenesis (ortholog); leukocyte aggregation (ortholog); negative regulation of cell adhesion (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); extracellular space (ortholog) 14 70055995 70132133 - 30032202 116915227 MODEL JAAIVD010000009;XM_032919615 XP_032775506 semaphorin-4D protein-coding 626013758 LOC116904443 vomeronasal type-1 receptor 97-like 6 124083457 124086321 + 22301074;30032202 116904443 MODEL JAAIVD010000024;XM_032907269 XP_032763160 protein-coding 626013763 Padi3 peptidyl arginine deiminase 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein-arginine deiminase activity (ortholog); ASSOCIATED WITH Central Centrifugal Cicatricial Alopecia (ortholog); genetic disease (ortholog); Uncombable Hair Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 17332417 17360060 + 22301074;30032202 116893544 MODEL JAAIVD010000025;XM_032895266 XP_032751157 protein-arginine deiminase type-3 protein-coding 626013783 LOC116897342 60S ribosomal protein L35-like 3 218211440 218211826 - 116897342 MODEL JAAIVD010000012 pseudo 626013784 LOC116902609 small nucleolar RNA SNORA17 5 125185107 125185225 - 116902609 MODEL JAAIVD010000023 pseudo 626013785 Cmc2 C-X9-C motif containing 2 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 17 36528773 36553964 - 30032202 116886334 MODEL JAAIVD010000011;XM_032887787;XM_032887788 XP_032743678;XP_032743679 COX assembly mitochondrial protein 2 homolog protein-coding 626013796 Gsr glutathione-disulfide reductase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); glutathione binding (ortholog); glutathione-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); response to activity (ortholog); response to auditory stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; glutathione metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute kidney tubular necrosis (ortholog); Acute Lung Injury (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); mitochondrion (ortholog) 13 53318692 53362535 - 22301074;30032202 116914456 MODEL JAAIVD010000008;XM_032918758 XP_032774649 glutathione reductase, mitochondrial protein-coding 626013813 LOC116883704 cathepsin J 14 77210333 77214950 + 30032202 116883704 MODEL JAAIVD010000009;XM_032884919;XM_032884920 XP_032740810;XP_032740811 protein-coding 626013829 Aass aminoadipate-semialdehyde synthase ENCODES a protein that exhibits saccharopine dehydrogenase (NAD+, L-glutamate-forming) activity (ortholog); saccharopine dehydrogenase (NADP+, L-lysine-forming) activity (ortholog); INVOLVED IN L-lysine catabolic process (ortholog); lysine catabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); hyperlysinemia (ortholog); FOUND IN mitochondrion (ortholog) 6 116101103 116150533 + 30032202 116904042 MODEL JAAIVD010000024;XM_032906898 XP_032762789 alpha-aminoadipic semialdehyde synthase, mitochondrial protein-coding 626013856 Pgap3 post-GPI attachment to proteins phospholipase 3 ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); GPI anchor metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 4 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 9 55993823 56005276 + 22301074;30032202 116909746 MODEL JAAIVD010000002;XM_032913425 XP_032769316 post-GPI attachment to proteins factor 3 protein-coding 626013867 LOC116886783 5S ribosomal RNA 17 43141598 43141716 - 116886783 MODEL JAAIVD010000011;XR_004386177 rrna 626013870 LOC116914125 small nucleolar RNA SNORA17 12 24113908 24114039 - 116914125 MODEL JAAIVD010000007;XR_004389688 snorna 626013873 Smad9 SMAD family member 9 INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cartilage development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia 1 (ortholog); Colorectal Neoplasms (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 3 99602011 99621695 - 22301074;30032202 116896868 MODEL JAAIVD010000012;XM_032898397 XP_032754288 mothers against decapentaplegic homolog 9 protein-coding 626013882 Rufy2 RUN and FYVE domain containing 2 ENCODES a protein that exhibits SH3 domain binding (ortholog); FOUND IN cytoplasm (ortholog) 18 23675930 23710752 - 22301074;30032202 116887276 MODEL JAAIVD010000013;XM_032888848;XM_032888849;XM_032888850;XM_032888851;XM_032888852;XM_032888853;XM_032888854;XM_032888855;XM_032888856;XM_032888857;XR_004386207 XP_032744739;XP_032744740;XP_032744741;XP_032744742;XP_032744743;XP_032744744;XP_032744745;XP_032744746;XP_032744747;XP_032744748 RUN and FYVE domain-containing protein 2 protein-coding 626013935 LOC116903281 uncharacterized LOC116903281 6 23106480 23115493 - 116903281 MODEL JAAIVD010000024;XR_004388268 ncrna 626013940 Gins3 GINS complex subunit 3 INVOLVED IN cellular senescence (ortholog); DNA replication (ortholog); multicellular organism growth (ortholog); FOUND IN CMG complex (ortholog); GINS complex (ortholog); nucleoplasm (ortholog) 17 2458266 2465491 + 30032202 116886531 MODEL JAAIVD010000011;XM_032888052 XP_032743943 DNA replication complex GINS protein PSF3 protein-coding 626013947 Ppp2r2d protein phosphatase 2 regulatory subunit Bdelta ENCODES a protein that exhibits enzyme-substrate adaptor activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN regulation of chromosome segregation (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) 2 62938272 62973101 - 22301074;30032202 116891370 MODEL JAAIVD010000001;XM_032892367;XM_032892368 XP_032748258;XP_032748259 serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform protein-coding 626013963 Emx1 empty spiracles homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN brain development (ortholog); brain morphogenesis (ortholog); cerebral cortex development (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleus (ortholog) 6 60998577 61015042 - 22301074;30032202 116903579 MODEL JAAIVD010000024;XM_032906202 XP_032762093 homeobox protein EMX1 protein-coding 626013970 LOC116903198 killer cell lectin-like receptor subfamily B member 1F 6 18627864 18638689 - 116903198 MODEL JAAIVD010000024;XM_032905574;XM_032905575 XP_032761465;XP_032761466 protein-coding 626013984 LOC116894699 sperm motility kinase Z-like 2 218107666 218109132 + 22301074;30032202 116894699 MODEL JAAIVD010000001;XM_032896397 XP_032752288 protein-coding 626013987 Plxnb3 plexin B3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); protein domain specific binding (ortholog); Rho GDP-dissociation inhibitor binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); negative regulation of cell adhesion (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cell surface (ortholog) X 128809635 128824094 - 22301074;30032202 116889121 MODEL JAAIVD010000014;XM_032890293 XP_032746184 plexin-B3 protein-coding 626014026 Ctso cathepsin O 3 71613791 71633779 - 30032202 116896753 MODEL JAAIVD010000012;XM_032898196 XP_032754087 protein-coding 626014038 Poldip2 DNA polymerase delta interacting protein 2 INVOLVED IN error-free translesion synthesis (ortholog); mitochondrion organization (ortholog); mitotic spindle assembly (ortholog); ASSOCIATED WITH Neointima (ortholog); streptococcal meningitis (ortholog); FOUND IN cell-cell junction (ortholog); midbody (ortholog); mitochondrial matrix (ortholog) 9 91920603 91931166 - 22301074;30032202 116910624 MODEL JAAIVD010000002;XM_032914572 XP_032770463 polymerase delta-interacting protein 2 protein-coding 626014053 LOC116912742 vomeronasal type-2 receptor 116-like 11 19182415 19186482 - 116912742 MODEL JAAIVD010000006 pseudo 626014054 LOC116895925 vegetative cell wall protein gp1-like 3 123166250 123167371 + 116895925 MODEL JAAIVD010000012;XM_032896999 XP_032752890 protein-coding 626014057 LOC116899040 eukaryotic translation elongation factor 1 epsilon-1-like 4 58520868 58522587 + 116899040 MODEL JAAIVD010000003 pseudo 626014058 LOC116889185 annexin A7-like X 15389789 15391091 - 116889185 MODEL JAAIVD010000014 pseudo 626014059 Plod1 procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 ENCODES a protein that exhibits ferrous iron binding (ortholog); L-ascorbic acid binding (ortholog); peptide binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); epidermis development (ortholog); peptidyl-lysine hydroxylation (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); cryptorchidism (ortholog); FOUND IN catalytic complex (ortholog) 1 12838657 12865087 + 22301074;30032202 116892928 MODEL JAAIVD010000025;XM_032894865 XP_032750756 protein-coding 626014082 LOC116914331 disintegrin and metalloproteinase domain-containing protein 24-like 13 46774638 46776860 - 22301074;30032202 116914331 MODEL JAAIVD010000008;XM_032918556 XP_032774447 protein-coding 626014085 Tmem160 transmembrane protein 160 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 172606583 172609338 - 116892596 MODEL JAAIVD010000001;XM_032894376 XP_032750267 protein-coding 626014092 LOC116905844 high mobility group protein B1-like 7 12420427 12421078 + 116905844 MODEL JAAIVD010000026 pseudo 626014093 LOC116900736 uncharacterized LOC116900736 5 139748608 139751768 + 116900736 MODEL JAAIVD010000023;XR_004387946 ncrna 626014098 LOC116904778 small nucleolar RNA SNORA40 6 150399286 150399410 - 116904778 MODEL JAAIVD010000024;XR_004388442 snorna 626014101 LOC116905878 serine protease inhibitor A3M 7 115207630 115214920 - 30032202 116905878 MODEL JAAIVD010000026;XM_032908867 XP_032764758 protein-coding 626014110 Ubr3 ubiquitin protein ligase E3 component n-recognin 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN embryo development ending in birth or egg hatching (ortholog); in utero embryonic development (ortholog); negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog) 5 47185690 47331769 + 22301074;30032202 116901489 MODEL JAAIVD010000023;XM_032903452;XM_032903453;XM_032903454 XP_032759343;XP_032759344;XP_032759345 E3 ubiquitin-protein ligase UBR3 protein-coding 626014160 LOC116908272 ATPase inhibitor, mitochondrial-like 8 112697564 112698226 - 116908272 MODEL JAAIVD010000027 pseudo 626014161 Plekhg4 pleckstrin homology and RhoGEF domain containing G4 PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH spinocerebellar ataxia type 31 (ortholog) 17 25099139 25108082 + 22301074 116886655 MODEL JAAIVD010000011;XM_032888150 XP_032744041 puratrophin-1 protein-coding 626014186 Extl3 exostosin like glycosyltransferase 3 ENCODES a protein that exhibits glucuronyl-galactosyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); inflammatory response to wounding (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH genetic disease (ortholog); Immunoskeletal Dysplasia with Neurodevelopmental Abnormalities (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 12 59320785 59366873 + 22301074;30032202 116913954 MODEL JAAIVD010000007;XM_032918218;XM_032918219;XM_032918220;XM_032918221 XP_032774109;XP_032774110;XP_032774111;XP_032774112 exostosin-like 3 protein-coding 626014206 Sos1 SOS Ras/Rac guanine nucleotide exchange factor 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; erythropoietin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial heart septal defect (ortholog); Atrial Septal Defect, Secundum Type (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); GTPase complex (ortholog) 7 12593196 12669243 + 22301074;30032202 116905851 MODEL JAAIVD010000026;XM_032908829 XP_032764720 son of sevenless homolog 1 protein-coding 626014232 LOC116886457 U6 snRNA-associated Sm-like protein LSm7 17 36919379 36920075 + 22301074;30032202 116886457 MODEL JAAIVD010000011;XM_032887959 XP_032743850 protein-coding 626014237 Fbxo4 F-box protein 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); cellular response to ionizing radiation (ortholog); cellular senescence (ortholog); FOUND IN cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog); ubiquitin ligase complex (ortholog) 3 176169094 176182005 + 22301074;30032202 116897157 MODEL JAAIVD010000012;XM_032898827 XP_032754718 F-box only protein 4 protein-coding 626014248 Slitrk4 SLIT and NTRK like family member 4 INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog) X 124508893 124516125 - 22301074;30032202 116888779 MODEL JAAIVD010000014;XM_032890064 XP_032745955 SLIT and NTRK-like protein 4 protein-coding 626014254 LOC116902526 chromatin target of PRMT1 protein-like 1 131733695 131734477 + 116902526 MODEL JAAIVD010000025 pseudo 626014255 LOC116911687 probable crossover junction endonuclease EME2 10 81581646 81583835 - 116911687 MODEL JAAIVD010000005 pseudo 626014256 Pebp1 phosphatidylethanolamine binding protein 1 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); kinase binding (ortholog); INVOLVED IN eating behavior (ortholog); hippocampus development (ortholog); MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN apical part of cell (ortholog); axon terminus (ortholog); cell surface (ortholog) 16 36538734 36543050 + 30032202 116885553 MODEL JAAIVD010000004;XM_032886845 XP_032742736 phosphatidylethanolamine-binding protein 1 protein-coding 626014264 LOC116884082 small nucleolar RNA SNORA17 14 28274694 28274824 - 116884082 MODEL JAAIVD010000009;XR_004385826 snorna 626014267 LOC116908790 40S ribosomal protein S10-like 9 72652079 72652607 - 30032202 116908790 MODEL JAAIVD010000002;XM_032912183;XM_032912184 XP_032768074;XP_032768075 protein-coding 626014274 Gna13 G protein subunit alpha 13 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); INVOLVED IN activation of phospholipase D activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Burkitt lymphoma (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 69738809 69774824 - 22301074;30032202 116908749 MODEL JAAIVD010000002;XM_032912102 XP_032767993 guanine nucleotide-binding protein subunit alpha-13 protein-coding 626014282 LOC116900022 vomeronasal secretory protein 1-like 5 11448561 11450396 + 30032202 116900022 MODEL JAAIVD010000023;XM_032901820 XP_032757711 protein-coding 626014289 LOC116915014 non-POU domain-containing octamer-binding protein-like 13 11839938 11841315 - 116915014 MODEL JAAIVD010000008 pseudo 626014290 LOC116908462 U6 spliceosomal RNA 8 41538689 41538795 - 116908462 MODEL JAAIVD010000027;XR_004388980 snrna 626014293 Trpc6 transient receptor potential cation channel subfamily C member 6 ENCODES a protein that exhibits actin binding (ortholog); actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); negative regulation of dendrite morphogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); atypical hemolytic-uremic syndrome (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) 8 5279167 5388052 - 22301074;30032202 116907615 MODEL JAAIVD010000027;XM_032910668;XM_032910670 XP_032766559;XP_032766561 short transient receptor potential channel 6 protein-coding 626014313 LOC116897903 resistin-like gamma 4 33393201 33394671 + 22301074;30032202 116897903 MODEL JAAIVD010000003;XM_032899307 XP_032755198 protein-coding 626014320 LOC116889274 transcription factor BTF3-like X 118868351 118868824 + 116889274 MODEL JAAIVD010000014 pseudo 626014321 Lingo1 leucine rich repeat and Ig domain containing 1 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN central nervous system neuron development (ortholog); negative regulation of oligodendrocyte differentiation (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 64 (ortholog); essential tremor (ortholog); glaucoma (ortholog); FOUND IN glutamatergic synapse (ortholog); presynapse (ortholog) 8 50525779 50633698 - 22301074;30032202 116906597 MODEL JAAIVD010000027;XM_032909339;XM_032909340;XM_032909341 XP_032765230;XP_032765231;XP_032765232 leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1 protein-coding 626014334 Npbwr1 neuropeptides B and W receptor 1 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog) 1 141162374 141163363 - 22301074;30032202 116889571 MODEL JAAIVD010000025;XM_032890525 XP_032746416 neuropeptides B/W receptor type 1 protein-coding 626014337 Izumo1 izumo sperm-oocyte fusion 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); protein homodimerization activity (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); endoplasmic reticulum membrane (ortholog) 2 153894344 153899376 - 30032202 116892138 MODEL JAAIVD010000001;XM_032893627 XP_032749518 izumo sperm-egg fusion 1;izumo sperm-egg fusion protein 1 protein-coding 626014350 LOC116885107 small nucleolar RNA SNORD58 15 56982488 56982552 - 116885107 MODEL JAAIVD010000010;XR_004385972 snorna 626014353 LOC116912506 zinc finger protein 120-like 11 14861806 14874005 - 22301074 116912506 MODEL JAAIVD010000006;XM_032916592 XP_032772483 protein-coding 626014360 LOC116897031 FAS-associated factor 1 3 143754638 143757095 - 30032202 116897031 MODEL JAAIVD010000012;XM_032898648 XP_032754539 protein-coding 626014365 LOC116893068 heterogeneous nuclear ribonucleoprotein C-like 2 39731533 39735744 + 116893068 MODEL JAAIVD010000001 pseudo 626014366 Numa1 nuclear mitotic apparatus protein 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); dynein complex binding (ortholog); microtubule binding (ortholog); INVOLVED IN anastral spindle assembly (ortholog); astral microtubule organization (ortholog); establishment of mitotic spindle orientation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); myoepithelioma (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cortical microtubule (ortholog) 2 100254575 100299266 + 30032202 116891778 MODEL JAAIVD010000001;XM_032893119 XP_032749010 protein-coding 626014396 LOC116904689 small nucleolar RNA SNORA51 6 67390440 67390571 + 116904689 MODEL JAAIVD010000024;XR_004388385 snorna 626014399 Sh3bgrl3 SH3 domain binding glutamate rich protein like 3 ENCODES a protein that exhibits glutathione transferase activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); ruffle membrane (ortholog) 1 24111867 24113209 + 30032202 116894855 MODEL JAAIVD010000025;XM_032896499 XP_032752390 SH3 domain-binding glutamic acid-rich-like protein 3 protein-coding 626014406 Pir pirin ENCODES a protein that exhibits metal ion binding (ortholog); quercetin 2,3-dioxygenase activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN monocyte differentiation (ortholog); myeloid cell differentiation (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); contact dermatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) X 24845258 24949867 + 30032202 116889075 MODEL JAAIVD010000014;XM_032890256 XP_032746147 protein-coding 626014419 Rps19 ribosomal protein S19 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); erythrocyte differentiation (ortholog); maturation of SSU-rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 2 169813854 169819479 - 2116918;22301074;30032202 116892477 MODEL JAAIVD010000001;X51707;XM_032894205 CAA36003;XP_032750096 40S ribosomal protein S19 protein-coding 626014429 LOC116912748 60S ribosomal protein L38-like 11 14815542 14815787 + 116912748 MODEL JAAIVD010000006 pseudo 626014430 Rundc3b RUN domain containing 3B 6 140374128 140503453 - 116904141 MODEL JAAIVD010000024;XM_032907029;XM_032907030 XP_032762920;XP_032762921 RUN domain-containing protein 3B protein-coding 626014450 LOC116895031 small nucleolar RNA SNORA17 2 222240105 222240235 - 116895031 MODEL JAAIVD010000001;XR_004387217 snorna 626014453 LOC116890686 solute carrier family 22 member 20 2 1712113 1727035 + 22301074 116890686 MODEL JAAIVD010000001;XM_032891100 XP_032746991 protein-coding 626014465 LOC116893172 olfactory receptor 52E2-like 2 103154628 103161542 + 116893172 MODEL JAAIVD010000001 pseudo 626014466 LOC116907983 olfactory receptor 867-like 8 15579800 15580750 - 22301074;30032202 116907983 MODEL JAAIVD010000027;XM_032911228 XP_032767119 protein-coding 626014470 Hmx3 H6 family homeobox 3 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN brain development (ortholog); ear development (ortholog); embryo implantation (ortholog) 2 70307948 70311012 - 22301074;30032202 116893882 MODEL JAAIVD010000001;XM_032895604 XP_032751495 homeobox protein HMX3 protein-coding 626014476 LOC116903946 tubulin alpha-1 chain-like 1 146805267 146806648 - 116903946 MODEL JAAIVD010000025 pseudo 626014477 Bccip BRCA2 and CDKN1A interacting protein ENCODES a protein that exhibits kinase regulator activity (ortholog); tubulin binding (ortholog); INVOLVED IN DNA damage response (ortholog); establishment of mitotic spindle orientation (ortholog); microtubule anchoring (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytosol (ortholog) 2 68157360 68169946 - 30032202 116891386 MODEL JAAIVD010000001;XM_032892400 XP_032748291 BRCA2 and CDKN1A-interacting protein protein-coding 626014488 Il17d interleukin 17D ENCODES a protein that exhibits cytokine activity (ortholog); protein homodimerization activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN inflammatory response (ortholog); negative regulation of hemopoiesis (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Chronic Hepatitis C (ortholog); Cytomegalovirus Infections (ortholog); hidradenitis suppurativa (ortholog); FOUND IN extracellular space (ortholog) 12 67287517 67304925 - 22301074 116913320 MODEL JAAIVD010000007;XM_032917466 XP_032773357 interleukin-17D protein-coding 626014494 Ubr4 ubiquitin protein ligase E3 component n-recognin 4 ENCODES a protein that exhibits calmodulin binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cellular response to stress (ortholog); cytoplasm protein quality control (ortholog); cytoplasm protein quality control by the ubiquitin-proteasome system (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Dwarfism (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) 1 18697176 18805255 - 22301074 116893657 MODEL JAAIVD010000025;XM_032895377 XP_032751268 E3 ubiquitin-protein ligase UBR4 protein-coding 626014604 LOC116885977 U4 spliceosomal RNA 16 20556605 20556739 - 116885977 MODEL JAAIVD010000004;XR_004386058 snrna 626014607 Asah2 N-acylsphingosine amidohydrolase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); N-acylsphingosine amidohydrolase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); ceramide biosynthetic process (ortholog); ceramide catabolic process (ortholog); ASSOCIATED WITH celiac disease (ortholog); liver disease (ortholog); FOUND IN caveola (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) 2 32046031 32139376 - 30032202 116891088 MODEL JAAIVD010000001;XM_032891802 XP_032747693 neutral ceramidase protein-coding 626014634 LOC116884957 protein SDA1 homolog 15 33135079 33137700 + 116884957 MODEL JAAIVD010000010 pseudo 626014635 LOC116893772 cytochrome c, somatic-like 2 30316996 30317309 - 116893772 MODEL JAAIVD010000001 pseudo 626014636 Lingo3 leucine rich repeat and Ig domain containing 3 ASSOCIATED WITH myoepithelioma (ortholog) 1 154040481 154051642 + 22301074;30032202 116904790 MODEL JAAIVD010000025;XM_032907448 XP_032763339 leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3 protein-coding 626014642 Fdx1 ferredoxin 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); electron transfer activity (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to cAMP (ortholog); cellular response to epinephrine stimulus (ortholog); PARTICIPATES IN aldosterone biosynthetic pathway; cortisol biosynthetic pathway; estradiol biosynthetic pathway; ASSOCIATED WITH pancreatitis (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 14 54595982 54614845 + 22301074;30032202 116883539 MODEL JAAIVD010000009;XM_032884710 XP_032740601 adrenodoxin, mitochondrial protein-coding 626014650 LOC116887567 60S ribosomal protein L35-like 18 42109574 42113669 + 116887567 MODEL JAAIVD010000013 pseudo 626014651 LOC116891860 NADP-dependent malic enzyme, mitochondrial 2 111421916 111557972 + 22301074;30032202 116891860 MODEL JAAIVD010000001;XM_032893258;XM_032893259 XP_032749149;XP_032749150 protein-coding 626014665 LOC116897611 small nucleolar RNA SNORA17 3 100927147 100927263 - 116897611 MODEL JAAIVD010000012 pseudo 626014666 LOC116906077 glyceraldehyde-3-phosphate dehydrogenase-like 7 63888431 63889119 + 22301074;30032202 116906077 MODEL JAAIVD010000026;XM_032909104 XP_032764995 protein-coding 626014669 Dnajc9 DnaJ heat shock protein family (Hsp40) member C9 ENCODES a protein that exhibits heat shock protein binding (ortholog); histone binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of ATP-dependent activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 12 90184028 90188317 - 30032202 116913326 MODEL JAAIVD010000007;XM_032917469 XP_032773360 dnaJ homolog subfamily C member 9 protein-coding 626014678 LOC116915092 transmembrane protein 60-like 13 12503198 12504180 + 116915092 MODEL JAAIVD010000008;XM_032919519 XP_032775410 protein-coding 626014683 Nrn1 neuritin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN nervous system development (ortholog); neuron projection extension (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog) 14 55761842 55770722 - 22301074;30032202 116883695 MODEL JAAIVD010000009;XM_032884908 XP_032740799 neuritin protein-coding 626014690 LOC116898824 mRNA-capping enzyme-like 4 21599365 21601229 + 116898824 MODEL JAAIVD010000003 pseudo 626014691 LOC116895522 preferentially expressed antigen in melanoma-like protein 7 3 118476341 118477852 - 116895522 MODEL JAAIVD010000012 pseudo 626014692 LOC116895812 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like 3 70174295 70188544 + 116895812 MODEL JAAIVD010000012 pseudo 626014693 LOC116900681 cystatin-S 5 128760547 128764823 - 22301074;30032202 116900681 MODEL JAAIVD010000023;XM_032902385 XP_032758276 protein-coding 626014698 LOC116902018 ankyrin repeat and EF-hand domain-containing protein 1-like 5 116159432 116167767 + 116902018 MODEL JAAIVD010000023;XM_032904290;XR_004388034 XP_032760181 protein-coding 626014708 Erap1 endoplasmic reticulum aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); endopeptidase activity (ortholog); interleukin-6 receptor binding (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); peptide antigen assembly with MHC class I protein complex (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); Behcet's disease (ortholog); cervix carcinoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) 3 220593132 220631708 - 22301074;30032202 116897351 MODEL JAAIVD010000012;XM_032899108;XM_032899109;XM_032899110 XP_032754999;XP_032755000;XP_032755001 protein-coding 626014736 Tll2 tolloid like 2 INVOLVED IN negative regulation of skeletal muscle tissue growth (ortholog); ASSOCIATED WITH spinal muscular atrophy (ortholog) 2 40210241 40325564 - 22301074;30032202 116893796 MODEL JAAIVD010000001;XM_032895500 XP_032751391 tolloid-like protein 2 protein-coding 626014761 Garem1 GRB2 associated regulator of MAPK1 subtype 1 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); epidermal growth factor receptor signaling pathway (ortholog); multicellular organism growth (ortholog) 15 22444730 22607687 - 30032202 116884609 MODEL JAAIVD010000010;XM_032885750 XP_032741641 GRB2-associated and regulator of MAPK protein 1 protein-coding 626014771 LOC116915117 60S ribosomal protein L18a-like 13 60840898 60841493 + 116915117 MODEL JAAIVD010000008 pseudo 626014772 LOC116910258 WW domain-binding protein 11-like 9 31768397 31770284 - 116910258 MODEL JAAIVD010000002 pseudo 626014773 Septin4 septin 4 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); flagellated sperm motility (ortholog); hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Lewy body dementia (ortholog); Parkinson's disease (ortholog); Spermatogenic Failure 99 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell projection (ortholog) 9 83209074 83232816 - 22301074;30032202 116908921 MODEL JAAIVD010000002;XM_032912378;XM_032912379;XM_032912380;XR_004389040 XP_032768269;XP_032768270;XP_032768271 septin-4 protein-coding 626014800 Mettl15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine ENCODES a protein that exhibits rRNA (cytosine-N4-)-methyltransferase activity (ortholog); INVOLVED IN rRNA base methylation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 87419645 87593616 - 30032202 116901723 MODEL JAAIVD010000023;XM_032903856;XM_032903857;XM_032903858;XM_032903859 XP_032759747;XP_032759748;XP_032759749;XP_032759750 methyltransferase like 15;probable methyltransferase-like protein 15 protein-coding 626014819 LOC116886659 60S ribosomal protein L28-like 17 26200016 26200848 + 116886659 MODEL JAAIVD010000011 pseudo 626014820 Slc25a16 solute carrier family 25 member 16 ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); nonsyndromic congenital nail disorder (ortholog); FOUND IN mitochondrion (ortholog) 18 23748082 23770819 - 22301074 116887162 MODEL JAAIVD010000013;XM_032888710;XM_032888711 XP_032744601;XP_032744602 graves disease carrier protein protein-coding 626014836 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 63143170 63143241 + 116897672 MODEL JAAIVD010000012 trna 626014837 LOC116888187 steroid hormone receptor ERR2-like X 120770354 120771999 + 116888187 MODEL JAAIVD010000014 pseudo 626014838 Pld5 phospholipase D family member 5 ASSOCIATED WITH autistic disorder (ortholog) 10 54479531 54648165 - 22301074 116911188 MODEL JAAIVD010000005;XM_032915057;XM_032915058 XP_032770948;XP_032770949 inactive phospholipase D5 protein-coding 626014854 Luc7l LUC7 like ENCODES a protein that exhibits identical protein binding (ortholog); RS domain binding (ortholog); INVOLVED IN negative regulation of striated muscle tissue development (ortholog); FOUND IN nucleus (ortholog) 9 3512381 3542017 + 22301074;30032202 116908488 MODEL JAAIVD010000002;XM_032911642 XP_032767533 putative RNA-binding protein Luc7-like 1 protein-coding 626014868 C4H22orf39 chromosome 4 C22orf39 homolog INVOLVED IN negative regulation of long-term synaptic potentiation (ortholog); regulation of synaptic plasticity (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog); synaptic cleft (ortholog) 4 4097019 4101214 + 116898679 MODEL JAAIVD010000003;XM_032899930;XM_032899931 XP_032755821;XP_032755822 UPF0545 protein C22orf39 homolog protein-coding 626014878 Thoc3 THO complex 3 INVOLVED IN mRNA export from nucleus (ortholog); FOUND IN chromosome, telomeric region (ortholog); THO complex part of transcription export complex (ortholog); transcription export complex (ortholog) 14 72807221 72816406 - 22301074;30032202 116883696 MODEL JAAIVD010000009;XM_032884909 XP_032740800 THO complex subunit 3 protein-coding 626014888 Bzw1 basic leucine zipper and W2 domains 1 INVOLVED IN regulation of translational initiation (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog) 4 133995031 134008857 - 22301074;30032202 116899431 MODEL JAAIVD010000003;XM_032901185;XM_032901186 XP_032757076;XP_032757077 basic leucine zipper and W2 domain-containing protein 1 protein-coding 626014906 Fam168a family with sequence similarity 168 member A INVOLVED IN positive regulation of base-excision repair (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog) 2 99006566 99148664 + 30032202 116891747 MODEL JAAIVD010000001;XM_032893058;XM_032893059;XM_032893060;XM_032893061 XP_032748949;XP_032748950;XP_032748951;XP_032748952 protein FAM168A protein-coding 626014929 Ncoa6 nuclear receptor coactivator 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); enzyme binding (ortholog); INVOLVED IN brain development (ortholog); DNA damage response (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN estrogen signaling pathway; glucocorticoid signaling pathway; histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); cardiomyopathy (ortholog); colon cancer (ortholog); FOUND IN cytosol (ortholog); histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog) 5 134737917 134809695 - 30032202 116902175 MODEL JAAIVD010000023;XM_032904520;XM_032904521;XM_032904522;XM_032904523;XM_032904524 XP_032760411;XP_032760412;XP_032760413;XP_032760414;XP_032760415 protein-coding 626014956 Ugdh UDP-glucose 6-dehydrogenase ENCODES a protein that exhibits identical protein binding (ortholog); UDP-glucose 6-dehydrogenase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); gastrulation with mouth forming second (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; galactokinase deficiency pathway; GALE deficiency pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 84 (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog) 11 22432631 22456033 - 22301074;30032202 116912227 MODEL JAAIVD010000006;XM_032916186 XP_032772077 protein-coding 626014972 LOC116914737 40S ribosomal protein S15a-like 13 39971246 39971648 + 116914737 MODEL JAAIVD010000008 pseudo 626014973 Eml1 EMAP like 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN brain development (ortholog); hematopoietic progenitor cell differentiation (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH congenital nervous system abnormality (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); microtubule (ortholog); microtubule cytoskeleton (ortholog) 7 126086035 126214625 + 30032202 116905450 MODEL JAAIVD010000026;XM_032908401;XM_032908402;XM_032908403;XM_032908404 XP_032764292;XP_032764293;XP_032764294;XP_032764295 echinoderm microtubule-associated protein-like 1 protein-coding 626015009 Bola3 bolA family member 3 INVOLVED IN adaptive thermogenesis (ortholog); energy homeostasis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 2 (ortholog); FOUND IN cytosol (ortholog); iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) 6 62868910 62878108 - 116903611 MODEL JAAIVD010000024;XM_032906255 XP_032762146 bolA-like protein 3 protein-coding 626015017 Slc26a6 solute carrier family 26 member 6 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); bicarbonate transport (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hyperoxaluria (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 8 100185646 100195930 + 22301074;30032202 116907623 MODEL JAAIVD010000027;XM_032910680 XP_032766571 protein-coding 626015042 Cldn18 claudin 18 INVOLVED IN cellular response to estrogen stimulus (ortholog); digestive tract development (ortholog); epithelial cell proliferation (ortholog); ASSOCIATED WITH asthma (ortholog); megacolon (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) 8 91030382 91056043 - 22301074;30032202 116907260 MODEL JAAIVD010000027;XM_032910216;XM_032910217 XP_032766107;XP_032766108 claudin-18 protein-coding 626015054 LOC116910084 ATP synthase-coupling factor 6, mitochondrial-like 9 51848136 51848510 + 116910084 MODEL JAAIVD010000002 pseudo 626015055 Zdhhc17 zDHHC palmitoyltransferase 17 ENCODES a protein that exhibits identical protein binding (ortholog); palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN axonogenesis (ortholog); lipoprotein transport (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); ASSOCIATED WITH Huntington's disease (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 189091461 189154350 - 22301074;30032202 116908855 MODEL JAAIVD010000025;XM_032912296 XP_032768187 palmitoyltransferase ZDHHC17;zinc finger DHHC-type palmitoyltransferase 17 protein-coding 626015076 Baz1a bromodomain adjacent to zinc finger domain 1A INVOLVED IN chromatin remodeling (ortholog); DNA-templated DNA replication (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH X-linked VACTERL association (ortholog); FOUND IN ACF complex (ortholog); CHRAC (ortholog); nuclear chromosome (ortholog) 7 68256916 68347670 - 22301074;30032202 116905053 MODEL JAAIVD010000026;XM_032907744 XP_032763635 bromodomain adjacent to zinc finger domain protein 1A protein-coding 626015104 Fam135a family with sequence similarity 135 member A ASSOCIATED WITH infantile histiocytoid cardiomyopathy (ortholog) 4 101365676 101441881 - 116899255 MODEL JAAIVD010000003;XM_032900864;XM_032900865;XM_032900866;XM_032900867;XM_032900868;XM_032900869;XM_032900870;XM_032900871 XP_032756755;XP_032756756;XP_032756757;XP_032756758;XP_032756759;XP_032756760;XP_032756761;XP_032756762 protein FAM135A protein-coding 626015144 LOC116888965 SNW domain-containing protein 1-like X 7351991 7353249 + 116888965 MODEL JAAIVD010000014 pseudo 626015145 Tpi1 triosephosphate isomerase 1 ENCODES a protein that exhibits isomerase activity (ortholog); protein homodimerization activity (ortholog); triose-phosphate isomerase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); glucose metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); carbohydrate metabolic disorder (ortholog); FOUND IN cytosol (ortholog) 6 23077982 23081492 + 22301074;30032202 116903273 MODEL JAAIVD010000024;XM_032905689 XP_032761580 triosephosphate isomerase protein-coding 626015156 LOC116893226 vomeronasal type-2 receptor 116-like 2 115192253 115205629 - 116893226 MODEL JAAIVD010000001 pseudo 626015157 LOC116888202 pyruvate kinase PKM-like X 126493511 126495089 + 116888202 MODEL JAAIVD010000014 pseudo 626015158 Serpinh1 serpin family H member 1 ENCODES a protein that exhibits unfolded protein binding (ortholog); INVOLVED IN chondrocyte development involved in endochondral bone morphogenesis (ortholog); collagen biosynthetic process (ortholog); collagen fibril organization (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 2 97614844 97622125 - 22301074;30032202 116891721 MODEL JAAIVD010000001;XM_032893010;XM_032893011 XP_032748901;XP_032748902 serpin H1 protein-coding 626015173 Chct1 CHD1 helical C-terminal domain containing 1 FOUND IN nucleus (ortholog) 9 85536307 85545697 - 116909748 MODEL JAAIVD010000002;XM_032913430 XP_032769321 C9H17orf64 chromosome 9 C17orf64 homolog;uncharacterized protein C17orf64 homolog protein-coding 626015182 Tspan2 tetraspanin 2 INVOLVED IN astrocyte development (ortholog); axon development (ortholog); inflammatory response (ortholog); ASSOCIATED WITH Stroke (ortholog); FOUND IN myelin sheath (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 3 55320777 55358513 - 22301074;30032202 116896455 MODEL JAAIVD010000012;XM_032897613 XP_032753504 tetraspanin-2 protein-coding 626015194 Cept1 choline/ethanolamine phosphotransferase 1 ENCODES a protein that exhibits diacylglycerol cholinephosphotransferase activity (ortholog); ethanolaminephosphotransferase activity (ortholog); phosphotransferase activity, for other substituted phosphate groups (ortholog); INVOLVED IN phosphatidylcholine biosynthetic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; FOUND IN endoplasmic reticulum membrane (ortholog) 3 51781490 51821176 + 30032202 116896404 MODEL JAAIVD010000012;XM_032897545;XM_032897546;XM_032897547;XM_032897548 XP_032753436;XP_032753437;XP_032753438;XP_032753439 choline/ethanolaminephosphotransferase 1 protein-coding 626015215 Spmip9 sperm microtubule inner protein 9 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); cytoplasm (ortholog); sperm flagellum (ortholog) 6 73911690 73918561 - 30032202 116902773 MODEL JAAIVD010000024;XM_032905115;XM_032905116 XP_032761006;XP_032761007 Tex37 testis expressed 37;testis-expressed sequence 37 protein protein-coding 626015226 Gabra3 gamma-aminobutyric acid type A receptor subunit alpha3 ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN auditory behavior (ortholog); chemical synaptic transmission (ortholog); response to lead ion (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Binge Drinking (ortholog); bipolar disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic specialization membrane (ortholog); presynaptic active zone membrane (ortholog) X 129762691 129822716 + 22301074;30032202 116888895 MODEL JAAIVD010000014;XM_032890156 XP_032746047 gamma-aminobutyric acid receptor subunit alpha-3 protein-coding 626015236 LOC116899756 U6 spliceosomal RNA 4 163492922 163493025 - 116899756 MODEL JAAIVD010000003;XR_004387771 snrna 626015239 Hectd2 HECT domain E3 ubiquitin protein ligase 2 2 37189446 37266520 - 30032202 116891139 MODEL JAAIVD010000001;XM_032891876;XM_032891877;XM_032891878;XM_032891879 XP_032747767;XP_032747768;XP_032747769;XP_032747770 probable E3 ubiquitin-protein ligase HECTD2 protein-coding 626015272 Trim15 tripartite motif containing 15 ENCODES a protein that exhibits molecular sequestering activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); innate immune response (ortholog); negative regulation of intracellular transport of viral material (ortholog); FOUND IN nucleus (ortholog) 18 9828907 9836738 - 22301074;30032202 116887705 MODEL JAAIVD010000013;XM_032889303;XM_032889304;XM_032889305;XM_032889306;XR_004386233 XP_032745194;XP_032745195;XP_032745196;XP_032745197 tripartite motif-containing protein 15 protein-coding 626015300 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 59897149 59897219 - 116904846 MODEL JAAIVD010000024 trna 626015301 Tsbp1 testis expressed basic protein 1 18 7108757 7155345 + 116887256 MODEL JAAIVD010000013;XM_032888822 XP_032744713 testis-expressed basic protein 1 protein-coding 626015327 Tle1 TLE family member 1, transcriptional corepressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 81195305 81276066 + 22301074;30032202 116901125 MODEL JAAIVD010000025;XM_032902716;XM_032902725;XM_032902734;XM_032902743;XM_032902751;XM_032902761;XM_032902770;XM_032902780;XM_032902791;XM_032902798;XM_032902806;XM_032902814 XP_032758607;XP_032758616;XP_032758625;XP_032758634;XP_032758642;XP_032758652;XP_032758661;XP_032758671;XP_032758682;XP_032758689;XP_032758697;XP_032758705 transducin-like enhancer protein 1 protein-coding 626015368 LOC116889536 U2 spliceosomal RNA X 65366687 65366871 + 116889536 MODEL JAAIVD010000014;XR_004386471 snrna 626015371 LOC116892577 paraneoplastic antigen-like protein 8A 2 172126458 172128330 - 116892577 MODEL JAAIVD010000001;XM_032894357;XM_032894358 XP_032750248;XP_032750249 protein-coding 626015380 Zfyve27 zinc finger FYVE-type containing 27 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network formation (ortholog); neuron projection development (ortholog); neurotrophin TRK receptor signaling pathway (ortholog); ASSOCIATED WITH hereditary spastic paraplegia 10 (ortholog); hereditary spastic paraplegia 33 (ortholog); paraplegia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 41282577 41303149 + 22301074;30032202 116891176 MODEL JAAIVD010000001;XM_032891990;XM_032891991 XP_032747881;XP_032747882 protrudin protein-coding 626015398 LOC116886680 uncharacterized LOC116886680 17 15136870 15147894 - 116886680 MODEL JAAIVD010000011;XM_032888171;XM_032888173;XM_032888174;XM_032888175 XP_032744062;XP_032744064;XP_032744065;XP_032744066 uncharacterized protein LOC116886680 protein-coding 626015419 Hspa12a heat shock protein family A (Hsp70) member 12A INVOLVED IN import into nucleus (ortholog); inflammatory response (ortholog); liver development (ortholog); ASSOCIATED WITH substance-related disorder (ortholog) 2 57250178 57320053 + 116893090 MODEL JAAIVD010000001;XM_032895033 XP_032750924 heat shock 70 kDa protein 12A protein-coding 626015435 LOC116904823 U6 spliceosomal RNA 6 153992474 153992577 + 116904823 MODEL JAAIVD010000024;XR_004388473 snrna 626015438 Ndufc2 NADH:ubiquinone oxidoreductase subunit C2 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); negative regulation of cellular process (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Nuclear Type Mitochondrial Complex I Deficiency 36 (ortholog); Stroke (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 95719432 95725818 + 22301074 116891695 MODEL JAAIVD010000001;XM_032892962 XP_032748853 NADH dehydrogenase [ubiquinone] 1 subunit C2 protein-coding 626015445 Lzts3 leucine zipper tumor suppressor family member 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN protein homooligomerization (ortholog); regulation of dendritic spine morphogenesis (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 5 110374048 110384008 - 30032202 116901973 MODEL JAAIVD010000023;XM_032904212;XM_032904214;XM_032904215;XM_032904216;XM_032904217;XM_032904218;XM_032904219 XP_032760103;XP_032760105;XP_032760106;XP_032760107;XP_032760108;XP_032760109;XP_032760110 leucine zipper putative tumor suppressor 3 protein-coding 626015472 Zbtb1 zinc finger and BTB domain containing 1 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to UV (ortholog); chromatin remodeling (ortholog); FOUND IN nuclear body (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 7 90545401 90556837 + 22301074;30032202 116905181 MODEL JAAIVD010000026;XM_032907965 XP_032763856 zinc finger and BTB domain-containing protein 1 protein-coding 626015478 Nr2e3 nuclear receptor subfamily 2 group E member 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH cone-rod dystrophy (ortholog); enhanced S-cone syndrome (ortholog); Eye Abnormalities (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 8 53793258 53800317 - 22301074;30032202 116908108 MODEL JAAIVD010000027;XM_032911388 XP_032767279 photoreceptor-specific nuclear receptor protein-coding 626015488 LOC116912804 achaete-scute homolog 2 11 42577061 42579669 - 22301074;30032202 116912804 MODEL JAAIVD010000006;XM_032916970 XP_032772861 protein-coding 626015494 Ppm1h protein phosphatase, Mg2+/Mn2+ dependent 1H ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein phosphatase activity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 1 201093743 201358985 + 30032202 116909597 MODEL JAAIVD010000025;XM_032913223 XP_032769114 protein phosphatase 1H protein-coding 626015508 LOC116913096 uncharacterized LOC116913096 12 68266109 68267462 - 116913096 MODEL JAAIVD010000007;XR_004389594 ncrna 626015512 LOC116912621 olfactory receptor 2D2-like 1 38204854 38205855 + 22301074 116912621 MODEL JAAIVD010000025;XM_032917106 XP_032772997 protein-coding 626015515 LOC116897588 small nucleolar RNA SNORA17 3 220960253 220960375 + 116897588 MODEL JAAIVD010000012 pseudo 626015516 Slc24a4 solute carrier family 24 member 4 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN amelogenesis (ortholog); calcium ion export across plasma membrane (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A5 (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); cone photoreceptor outer segment (ortholog); cytoplasm (ortholog) 7 113417757 113553212 + 22301074;30032202 116905354 MODEL JAAIVD010000026;XM_032908269 XP_032764160 sodium/potassium/calcium exchanger 4 protein-coding 626015537 LOC116912438 S-formylglutathione hydrolase-like 11 49077978 49078882 - 116912438 MODEL JAAIVD010000006 pseudo 626015538 LOC116898147 cytochrome c oxidase subunit 6A1, mitochondrial-like 4 116129589 116129924 + 116898147 MODEL JAAIVD010000003 pseudo 626015539 Uhrf2 ubiquitin like with PHD and ring finger domains 2 ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); SUMO transferase activity (ortholog); INVOLVED IN cell differentiation (ortholog); protein autoubiquitination (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN DNA modification pathway; FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 30136382 30199794 + 22301074;30032202 116891081 MODEL JAAIVD010000001;XM_032891795 XP_032747686 E3 ubiquitin-protein ligase UHRF2 protein-coding 626015559 Qars1 glutaminyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamine-tRNA ligase activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); glutaminyl-tRNA aminoacylation (ortholog); negative regulation of apoptotic signaling pathway (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; homocarnosinosis pathway; ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal dominant intellectual developmental disorder 43 (ortholog); epilepsy (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 99841402 99849348 + 22301074;30032202 116907597 MODEL JAAIVD010000027;XM_032910645 XP_032766536 glutamine--tRNA ligase protein-coding 626015587 LOC116893489 formyl peptide receptor-related sequence 7 2 182238393 182239412 + 30032202 116893489 MODEL JAAIVD010000001;XM_032895236 XP_032751127 protein-coding 626015590 LOC116898338 eukaryotic translation initiation factor 1A-like 4 45668884 45722010 + 116898338 MODEL JAAIVD010000003 pseudo 626015591 LOC116892717 zinc finger protein 805-like 2 179126329 179129979 - 30032202 116892717 MODEL JAAIVD010000001;XM_032894584 XP_032750475 protein-coding 626015599 LOC116911835 small nucleolar RNA SNORA17 10 17718926 17719051 - 116911835 MODEL JAAIVD010000005;XR_004389369 snorna 626015602 LOC116908561 uncharacterized LOC116908561 9 48979510 48984397 + 116908561 MODEL JAAIVD010000002;XR_004388994;XR_004388995;XR_004388996 ncrna 626015611 LOC116905661 uncharacterized LOC116905661 7 44795861 44812959 - 116905661 MODEL JAAIVD010000026;XR_004388558 ncrna 626015615 LOC116909717 pollen-specific leucine-rich repeat extensin-like protein 2 9 67389185 67390859 + 116909717 MODEL JAAIVD010000002;XM_032913389 XP_032769280 protein-coding 626015619 Otub2 OTU deubiquitinase, ubiquitin aldehyde binding 2 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); protein K11-linked deubiquitination (ortholog); protein K48-linked deubiquitination (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 7 114684304 114701350 + 30032202 116905370 MODEL JAAIVD010000026;XM_032908306;XM_032908307 XP_032764197;XP_032764198 ubiquitin thioesterase OTUB2 protein-coding 626015631 LOC116898346 heat shock protein HSP 90-beta-like 4 49621890 49623498 - 116898346 MODEL JAAIVD010000003 pseudo 626015632 Poc1a POC1 centriolar protein A INVOLVED IN bone development (ortholog); growth plate cartilage chondrocyte development (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH argininosuccinic aciduria (ortholog); genetic disease (ortholog); isolated growth hormone deficiency type IA (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 8 97586089 97653241 + 22301074;30032202 116907707 MODEL JAAIVD010000027;XM_032910831 XP_032766722 POC1 centriolar protein homolog A protein-coding 626015647 LOC116900031 60S ribosomal protein L23a-like 5 12970486 12970851 + 22301074;30032202 116900031 MODEL JAAIVD010000023;XM_032901828 XP_032757719 protein-coding 626015651 Znf750 zinc finger protein 750 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN epidermis development (ortholog); establishment of skin barrier (ortholog); membrane biogenesis (ortholog); ASSOCIATED WITH Seborrhea-Like Dermatitis with Psoriasiform Elements (ortholog); FOUND IN nucleus (ortholog) 9 62516900 62525709 + 30032202 116909259 MODEL JAAIVD010000002;XM_032912782;XM_032912783 XP_032768673;XP_032768674 protein-coding 626015661 Tmem60 transmembrane protein 60 ASSOCIATED WITH COVID-19 (ortholog) 6 150175712 150180489 + 116904166 MODEL JAAIVD010000024;XM_032907067 XP_032762958 protein-coding 626015667 Tmem260 transmembrane protein 260 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN protein maturation (ortholog); ASSOCIATED WITH genetic disease (ortholog); non-Hodgkin lymphoma (ortholog); stomach cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 12 74526682 74591085 - 116913289 MODEL JAAIVD010000007;XM_032917414 XP_032773305 protein-coding 626015687 Il9 interleukin 9 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-9 receptor binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Airway Obstruction (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog) 14 81584196 81587292 + 116884062 MODEL JAAIVD010000009;XM_032885308 XP_032741199 interleukin-9 protein-coding 626015696 Msmb microseminoprotein beta ASSOCIATED WITH prostate cancer (ortholog); Prostate Cancer, Hereditary, 13 (ortholog); Prostatic Neoplasms (ortholog) 13 7832001 7843998 + 116914828 MODEL JAAIVD010000008;XM_032919282 XP_032775173 beta-microseminoprotein protein-coding 626015704 Ocrl OCRL inositol polyphosphate-5-phosphatase ENCODES a protein that exhibits GTPase activator activity (ortholog); inositol phosphate phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); in utero embryonic development (ortholog); phosphatidylinositol dephosphorylation (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 65 (ortholog); Boucher-Neuhauser syndrome (ortholog); cataract (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) X 110441602 110510252 - 22301074;30032202 116889387 MODEL JAAIVD010000014;XM_032890488;XM_032890489 XP_032746379;XP_032746380 inositol polyphosphate 5-phosphatase OCRL protein-coding 626015735 LOC116900632 glycosyltransferase-like domain-containing protein 1 5 109884839 109886119 - 116900632 MODEL JAAIVD010000023 pseudo 626015736 Pofut2 protein O-fucosyltransferase 2 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN mesoderm formation (ortholog); positive regulation of protein folding (ortholog); protein O-linked glycosylation via fucose (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 18 597018 607275 + 30032202 116887221 MODEL JAAIVD010000013;XM_032888782 XP_032744673 GDP-fucose protein O-fucosyltransferase 2 protein-coding 626015749 LOC116897724 39S ribosomal protein L45, mitochondrial-like 4 40206730 40215934 - 116897724 MODEL JAAIVD010000003 pseudo 626015750 Hsp90ab1 heat shock protein 90 alpha family class B member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent protein binding (ortholog); CTP binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interleukin-4 (ortholog); chaperone-mediated protein complex assembly (ortholog); PARTICIPATES IN aldosterone signaling pathway; androgen signaling pathway; cortisol signaling pathway; ASSOCIATED WITH Female Infertility (ortholog); human immunodeficiency virus infectious disease (ortholog); intrahepatic cholangiocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); aryl hydrocarbon receptor complex (ortholog); axonal growth cone (ortholog) 4 84322683 84328169 + 22301074;30032202 116899130 MODEL JAAIVD010000003;XM_032900663 XP_032756554 heat shock protein HSP 90-beta protein-coding 626015765 Nectin2 nectin cell adhesion molecule 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular anatomical entity morphogenesis (ortholog); cilium organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Alzheimer's disease (ortholog); atherosclerosis (ortholog); FOUND IN apical junction complex (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) 2 170868183 170902894 + 30032202 116892507 MODEL JAAIVD010000001;XM_032894259;XM_032894260 XP_032750150;XP_032750151 nectin-2 protein-coding 626015783 Tasp1 taspase 1 ENCODES a protein that exhibits identical protein binding (ortholog); threonine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); proteolysis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Multiple Abnormalities (ortholog) 5 119149032 119376920 - 22301074;30032202 116902028 MODEL JAAIVD010000023;XM_032904304;XM_032904305;XM_032904306 XP_032760195;XP_032760196;XP_032760197 threonine aspartase 1 protein-coding 626015808 Aldh4a1 aldehyde dehydrogenase 4 family member A1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); L-glutamate gamma-semialdehyde dehydrogenase activity (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); hyperprolinemia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 1 18534343 18561573 - 22301074;30032202 116893633 MODEL JAAIVD010000025;XM_032895348 XP_032751239 delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial protein-coding 626015827 Gnao1 G protein subunit alpha o1 ENCODES a protein that exhibits corticotropin-releasing hormone receptor 1 binding (ortholog); G protein activity (ortholog); G protein-coupled serotonin receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); forebrain development (ortholog); PARTICIPATES IN dopamine signaling pathway via D2 family of receptors; endothelin signaling pathway; G protein mediated signaling pathway; ASSOCIATED WITH choreatic disease (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 17 730999 906092 + 22301074;30032202 116886568 MODEL JAAIVD010000011;XM_032888088;XM_032888089;XM_032888090;XR_004386116 XP_032743979;XP_032743980;XP_032743981 guanine nucleotide-binding protein G(o) subunit alpha protein-coding 626015852 Cstl1 cystatin like 1 ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); INVOLVED IN G protein-coupled opioid receptor signaling pathway (ortholog); signaling receptor ligand precursor processing (ortholog); transmission of nerve impulse (ortholog) 5 128286605 128291747 + 22301074 116900668 MODEL JAAIVD010000023;XM_032902371;XM_032902372 XP_032758262;XP_032758263 cystatin-like 1 protein-coding 626015865 LOC116901624 low molecular weight phosphotyrosine protein phosphatase-like 5 65733611 65734674 + 116901624 MODEL JAAIVD010000023 pseudo 626015866 Golga1 golgin A1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); transepithelial transport (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog); trans-Golgi network (ortholog) 5 16764868 16815200 - 30032202 116901373 MODEL JAAIVD010000023;XM_032903238;XM_032903239;XM_032903240;XM_032903241;XR_004387983;XR_004387984 XP_032759129;XP_032759130;XP_032759131;XP_032759132 golgin subfamily A member 1 protein-coding 626015904 LOC116913893 40S ribosomal protein S18-like 12 20270332 20270775 + 22301074;30032202 116913893 MODEL JAAIVD010000007;XM_032918178 XP_032774069 protein-coding 626015907 LOC116908420 small nucleolar RNA SNORA17 8 5317202 5317323 + 116908420 MODEL JAAIVD010000027 pseudo 626015908 LOC116895959 D-aminoacyl-tRNA deacylase 2-like 3 142748047 142748500 - 116895959 MODEL JAAIVD010000012 pseudo 626015909 LOC116887360 uncharacterized LOC116887360 18 11878907 11880644 + 116887360 MODEL JAAIVD010000013;XR_004386209 ncrna 626015913 LOC116888899 voltage-dependent anion-selective channel protein 1-like 1 108737111 108737960 + 116888899 MODEL JAAIVD010000025 pseudo 626015914 Glod5 glyoxalase domain containing 5 X 15409959 15423874 - 116889088 MODEL JAAIVD010000014;XM_032890262 XP_032746153 glyoxalase domain-containing protein 5 protein-coding 626015922 Ciart circadian associated repressor of transcription ENCODES a protein that exhibits E-box binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); locomotor rhythm (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 3 61409122 61412512 + 22301074;30032202 116896533 MODEL JAAIVD010000012;XM_032897714 XP_032753605 circadian-associated transcriptional repressor protein-coding 626015932 LOC116896208 all-trans-retinol dehydrogenase [NAD(+)] ADH4 3 20724278 20740616 - 22301074;30032202 116896208 MODEL JAAIVD010000012;XM_032897257 XP_032753148 protein-coding 626015945 LOC116904742 U1 spliceosomal RNA 6 112953383 112953551 + 116904742 MODEL JAAIVD010000024;XR_004388428 snrna 626015948 Apobec1 apolipoprotein B mRNA editing enzyme catalytic subunit 1 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); cytosine deaminase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cytidine to uridine editing (ortholog); defense response to virus (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH colon cancer (ortholog); Experimental Liver Cirrhosis (ortholog); familial hyperlipidemia (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 6 24511783 24523110 + 22301074;30032202 116903309 MODEL JAAIVD010000024;XM_032905739 XP_032761630 C->U-editing enzyme APOBEC-1 protein-coding 626015956 C8H3orf62 chromosome 8 C3orf62 homolog INVOLVED IN spermatogenesis (ortholog) 8 99721534 99725782 + 116907584 MODEL JAAIVD010000027;XM_032910623 XP_032766514 uncharacterized protein C3orf62 homolog protein-coding 626015963 LOC116907109 olfactory receptor 8B3-like 8 32482836 32483786 + 22301074;30032202 116907109 MODEL JAAIVD010000027;XM_032910077 XP_032765968 protein-coding 626015966 LOC116903123 eukaryotic translation initiation factor 3 subunit L-like 6 7169011 7170604 - 116903123 MODEL JAAIVD010000024 pseudo 626015967 LOC116909947 glutathione S-transferase alpha-4-like 9 87455837 87456504 + 116909947 MODEL JAAIVD010000002 pseudo 626015968 LOC116912671 protein SET-like 11 11318090 11325064 - 116912671 MODEL JAAIVD010000006 pseudo 626015969 Slc35b3 solute carrier family 35 member B3 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 5'-adenylyl sulfate transmembrane transport (ortholog); FOUND IN Golgi membrane (ortholog); trans-Golgi network (ortholog) 14 57983298 58008710 - 22301074;30032202 116883270 MODEL JAAIVD010000009;XM_032884259;XM_032884260;XR_004385735;XR_004385736;XR_004385737;XR_004385738 XP_032740150;XP_032740151 adenosine 3'-phospho 5'-phosphosulfate transporter 2 protein-coding 626016000 LOC116883153 60S ribosomal protein L37a-like 1 24277309 24277589 - 116883153 MODEL JAAIVD010000025 pseudo 626016001 Slc2a1 solute carrier family 2 member 1 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fucose transmembrane transporter activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular response to glucose starvation (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Glut1 deficiency syndrome pathway; hypoxia inducible factor pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol-Related Disorders (ortholog); Alzheimer's disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 1 37814409 37842411 - 22301074;30032202 116897727 MODEL JAAIVD010000025;XM_032899178 XP_032755069 solute carrier family 2, facilitated glucose transporter member 1 protein-coding 626016015 LOC116886856 uncharacterized LOC116886856 18 10038605 10041152 - 116886856 MODEL JAAIVD010000013;XR_004386190 ncrna 626016019 LOC116898126 ubiquitin-conjugating enzyme E2 variant 1-like 4 108043799 108044239 - 116898126 MODEL JAAIVD010000003 pseudo 626016020 LOC116912890 DNA-(apurinic or apyrimidinic site) lyase 2-like 11 61847836 61849386 - 22301074;30032202 116912890 MODEL JAAIVD010000006;XM_032917147 XP_032773038 protein-coding 626016023 Fyttd1 forty-two-three domain containing 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 4 17681869 17710842 + 30032202 116898783 MODEL JAAIVD010000003;XM_032900120;XM_032900121 XP_032756011;XP_032756012 UAP56-interacting factor protein-coding 626016039 Smim8 small integral membrane protein 8 FOUND IN mitochondrion (ortholog) 1 108032574 108043321 + 116902177 MODEL JAAIVD010000025;XM_032904531;XM_032904540;XM_032904549 XP_032760422;XP_032760431;XP_032760440 protein-coding 626016053 Eif4g3 eukaryotic translation initiation factor 4 gamma 3 ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN negative regulation of autophagy (ortholog); positive regulation of meiosis I (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH heparin cofactor II deficiency (ortholog); prostate cancer (ortholog); FOUND IN synapse (ortholog) 1 20017374 20235797 - 22301074;30032202 116893989 MODEL JAAIVD010000025;XM_032895707;XM_032895715;XM_032895722;XM_032895728;XM_032895735;XM_032895743;XM_032895751;XM_032895758;XM_032895766;XM_032895774;XM_032895781;XM_032895789;XM_032895795;XM_032895802;XM_032895807 XP_032751598;XP_032751606;XP_032751613;XP_032751619;XP_032751626;XP_032751634;XP_032751642;XP_032751649;XP_032751657;XP_032751665;XP_032751672;XP_032751680;XP_032751686;XP_032751693;XP_032751698 protein-coding 626016116 Slc16a12 solute carrier family 16 member 12 ENCODES a protein that exhibits creatine transmembrane transporter activity (ortholog); uniporter activity (ortholog); INVOLVED IN creatine transmembrane transport (ortholog); creatinine metabolic process (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 47 (ortholog); coloboma (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 2 34279392 34357379 - 22301074;30032202;34075817 116891110 MODEL JAAIVD010000001;XM_032891823 XP_032747714 monocarboxylate transporter 12 protein-coding 626016127 Ublcp1 ubiquitin like domain containing CTD phosphatase 1 ENCODES a protein that exhibits proteasome regulatory particle binding (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of ATP-dependent activity (ortholog); regulation of proteasome assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 27277257 27292626 - 22301074;30032202 116908740 MODEL JAAIVD010000002;XM_032912087 XP_032767978 ubiquitin-like domain-containing CTD phosphatase 1 protein-coding 626016142 LOC116912930 U6 spliceosomal RNA 11 23261306 23261410 - 116912930 MODEL JAAIVD010000006;XR_004389501 snrna 626016145 LOC116907954 dynein light chain 1, cytoplasmic-like 8 73538572 73538838 - 22301074;30032202 116907954 MODEL JAAIVD010000027;XM_032911179 XP_032767070 protein-coding 626016148 Oxnad1 oxidoreductase NAD binding domain containing 1 FOUND IN mitochondrion (ortholog) 13 7784357 7803825 + 22301074;30032202 116914565 MODEL JAAIVD010000008;XM_032918919 XP_032774810 oxidoreductase NAD-binding domain-containing protein 1 protein-coding 626016160 Adamdec1 ADAM like decysin 1 INVOLVED IN cell differentiation (ortholog); extracellular matrix organization (ortholog); inflammatory response (ortholog) 12 55798350 55815551 + 22301074 116913820 MODEL JAAIVD010000007;XM_032918132 XP_032774023 ADAM DEC1 protein-coding 626016176 LOC116911531 60S ribosomal protein L29-like 10 39983719 39984151 + 116911531 MODEL JAAIVD010000005 pseudo 626016177 Nom1 nucleolar protein with MIF4G domain 1 INVOLVED IN hair follicle maturation (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN nucleolus (ortholog) 6 157485826 157502173 - 22301074;30032202 116904241 MODEL JAAIVD010000024;XM_032907189 XP_032763080 nucleolar MIF4G domain-containing protein 1 protein-coding 626016192 Trnal-aag transfer RNA leucine (anticodon AAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41355936 41356017 + 116884227 MODEL JAAIVD010000009 trna 626016193 Ankrd61 ankyrin repeat domain 61 FOUND IN nucleoplasm (ortholog) 16 9286231 9290334 + 22301074 116885825 MODEL JAAIVD010000004;XM_032887170 XP_032743061 ankyrin repeat domain-containing protein 61 protein-coding 626016198 LOC116907188 heterogeneous nuclear ribonucleoprotein A1-like 8 2628205 2630845 + 116907188 MODEL JAAIVD010000027 pseudo 626016199 LOC116887335 cytochrome P450 4A2 1 39308985 39320403 - 22301074;30032202 116887335 MODEL JAAIVD010000025;XM_032888931 XP_032744822 protein-coding 626016214 LOC116891637 membrane-spanning 4-domains subfamily A member 6B-like 2 11285549 11293808 - 116891637 MODEL JAAIVD010000001 pseudo 626016215 LOC116886651 myosin light chain 6B-like 17 22613505 22614120 - 116886651 MODEL JAAIVD010000011 pseudo 626016216 Dpf2 double PHD fingers 2 ENCODES a protein that exhibits histone H3K14ac reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); histone H4K16ac reader activity (ortholog); INVOLVED IN negative regulation of myeloid progenitor cell differentiation (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 2 1784395 1799905 + 30032202 116890690 MODEL JAAIVD010000001;XM_032891105;XM_032891106 XP_032746996;XP_032746997 zinc finger protein ubi-d4 protein-coding 626016235 Rpp25 ribonuclease P and MRP subunit p25 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH autistic disorder (ortholog); colorectal cancer (ortholog); FOUND IN centriolar satellite (ortholog); multimeric ribonuclease P complex (ortholog); nucleoplasm (ortholog) 8 51393365 51394855 + 30032202 116908085 MODEL JAAIVD010000027;XM_032911365 XP_032767256 ribonuclease P protein subunit p25 protein-coding 626016240 Cnpy2 canopy FGF signaling regulator 2 INVOLVED IN negative regulation of gene expression (ortholog); regulation of low-density lipoprotein particle clearance (ortholog); ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog) 1 155792269 155796928 + 30032202 116905983 MODEL JAAIVD010000025;XM_032909009 XP_032764900 protein canopy homolog 2 protein-coding 626016250 Dgat1 diacylglycerol O-acyltransferase 1 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); diacylglycerol binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); fatty acid homeostasis (ortholog); glycerolipid metabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH cardiomyopathy (ortholog); chronic kidney disease (ortholog); congenital diarrhea 7 with exudative enteropathy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 1 248835698 248846112 - 22301074;30032202 116913227 MODEL JAAIVD010000025;XM_032917399 XP_032773290 protein-coding 626016271 Dact2 dishevelled binding antagonist of beta catenin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN epithelial cell morphogenesis (ortholog); hematopoietic progenitor cell differentiation (ortholog); inner medullary collecting duct development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Liver Neoplasms (ortholog) 2 183630020 183639561 - 30032202 116892778 MODEL JAAIVD010000001;XM_032894652;XM_032894653 XP_032750543;XP_032750544 dapper homolog 2 protein-coding 626016282 LOC116907207 putative sperm motility kinase W 1 159641992 159643952 + 22301074;30032202 116907207 MODEL JAAIVD010000025;XM_032910171 XP_032766062 protein-coding 626016287 LOC116893737 glyceraldehyde-3-phosphate dehydrogenase-like 2 19216184 19220218 - 22301074;30032202 116893737 MODEL JAAIVD010000001;XM_032895449;XM_032895450 XP_032751340;XP_032751341 protein-coding 626016294 Taf8 TATA-box binding protein associated factor 8 INVOLVED IN DNA-templated transcription open complex formation (ortholog); inner cell mass cell proliferation (ortholog); maintenance of protein location in nucleus (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH microcephaly (ortholog); NEURODEVELOPMENTAL DISORDER WITH SEVERE MOTOR IMPAIRMENT, ABSENT LANGUAGE, CEREBRAL HYPOMYELINATION, AND BRAIN ATROPHY (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 4 82379743 82392304 + 22301074;30032202 116899084 MODEL JAAIVD010000003;XM_032900585 XP_032756476 transcription initiation factor TFIID subunit 8 protein-coding 626016305 Zdhhc3 zDHHC palmitoyltransferase 3 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); lipoprotein localization to membrane (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN Golgi apparatus (ortholog) 8 114206243 114250352 - 30032202 116908016 MODEL JAAIVD010000027;XM_032911275;XM_032911276;XM_032911277;XM_032911278 XP_032767166;XP_032767167;XP_032767168;XP_032767169 palmitoyltransferase ZDHHC3;zinc finger DHHC-type palmitoyltransferase 3 protein-coding 626016327 Ncf1 neutrophil cytosolic factor 1 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular defense response (ortholog); cellular response to glucose stimulus (ortholog); cellular response to testosterone stimulus (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); autosomal recessive chronic granulomatous disease 1 (ortholog); autosomal recessive chronic granulomatous disease 2 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 16 19821589 19829805 + 22301074;30032202 116885770 MODEL JAAIVD010000004;XM_032887086 XP_032742977 neutrophil cytosol factor 1 protein-coding 626016342 Nkx2-8 NK2 homeobox 8 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); DNA-templated transcription (ortholog); lung development (ortholog); ASSOCIATED WITH spina bifida (ortholog) 7 69963487 69965285 - 22301074;30032202 116905754 MODEL JAAIVD010000026;XM_032908722 XP_032764613 homeobox protein Nkx-2.8 protein-coding 626016348 LOC116897322 uncharacterized LOC116897322 3 211961691 211986046 - 116897322 MODEL JAAIVD010000012;XM_032899075;XM_032899076;XR_004387414;XR_004387415;XR_004387416 XP_032754966;XP_032754967 uncharacterized protein LOC116897322 protein-coding 626016365 LOC116898412 40S ribosomal protein S21-like 4 87342027 87342327 - 116898412 MODEL JAAIVD010000003 pseudo 626016366 LOC116891831 interferon-induced very large GTPase 1-like 2 104673240 104703995 - 22301074 116891831 MODEL JAAIVD010000001;XM_032893195 XP_032749086 protein-coding 626016373 LOC116886954 actin-related protein 2/3 complex subunit 2-like 18 29650109 29651010 - 116886954 MODEL JAAIVD010000013 pseudo 626016374 LOC116898076 cytochrome P450 4B1 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN biphenyl metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH autism spectrum disorder (ortholog); chronic obstructive pulmonary disease (ortholog); urinary bladder cancer (ortholog) 1 39349162 39366808 - 22301074 116898076 MODEL JAAIVD010000025;XM_032899470 XP_032755361 protein-coding 626016390 Gnb5 G protein subunit beta 5 ENCODES a protein that exhibits G-protein gamma-subunit binding (ortholog); GTPase activating protein binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN dark adaptation (ortholog); G protein-coupled dopamine receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Developmental Disabilities (ortholog); Fraser syndrome 3 (ortholog); FOUND IN cell body (ortholog); cell tip (ortholog); cytosol (ortholog) 8 69608104 69636739 + 22301074;30032202 116906938 MODEL JAAIVD010000027;XM_032909861 XP_032765752 guanine nucleotide-binding protein subunit beta-5 protein-coding 626016405 Slc15a1 solute carrier family 15 member 1 ENCODES a protein that exhibits channel inhibitor activity (ortholog); dipeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); metanephric proximal tubule development (ortholog); negative regulation of amino acid transport (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); membrane (ortholog) 12 3381855 3424139 + 22301074;30032202 116913444 MODEL AB008813;JAAIVD010000007;XM_032917644 XP_032773535 protein-coding 626016432 Ube2n ubiquitin conjugating enzyme E2 N ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to nutrient levels (ortholog); DNA double-strand break processing (ortholog); PARTICIPATES IN altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Embryo Loss (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 174737096 174766078 + 116908487 MODEL JAAIVD010000025;XM_032911646 XP_032767537 ubiquitin-conjugating enzyme E2 N protein-coding 626016440 Magi3 membrane associated guanylate kinase, WW and PDZ domain containing 3 ENCODES a protein that exhibits frizzled binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog) 3 53888398 54066814 + 22301074;30032202 116896434 MODEL JAAIVD010000012;XM_032897584;XM_032897585 XP_032753475;XP_032753476 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 3 protein-coding 626016469 LOC116895299 alcohol dehydrogenase 1-like 3 20804450 20821987 - 22301074;30032202 116895299 MODEL JAAIVD010000012;XM_032896611 XP_032752502 protein-coding 626016480 LOC116883584 butyrophilin subfamily 2 member A2 14 42491452 42502704 - 30032202 116883584 MODEL JAAIVD010000009;XM_032884764 XP_032740655 protein-coding 626016491 LOC116912899 39S ribosomal protein L30, mitochondrial-like 11 5550785 5551289 + 116912899 MODEL JAAIVD010000006 pseudo 626016492 Trnal-caa transfer RNA leucine (anticodon CAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41796468 41796573 - 116884165 MODEL JAAIVD010000009 trna 626016493 LOC116884708 DNA-directed RNA polymerases I, II, and III subunit RPABC3-like 15 33918455 33918959 + 116884708 MODEL JAAIVD010000010 pseudo 626016494 S100a13 S100 calcium binding protein A13 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of cytokine production (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 3 63096127 63105193 - 30032202 116896602 MODEL JAAIVD010000012;XM_032897854 XP_032753745 protein S100-A13 protein-coding 626016501 Emp2 epithelial membrane protein 2 ENCODES a protein that exhibits integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin-mediated cell contraction (ortholog); apoptotic process (ortholog); ASSOCIATED WITH nephrotic syndrome type 10 (ortholog); placental insufficiency (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); caveola (ortholog) 9 12041563 12074692 + 30032202 116910093 MODEL JAAIVD010000002;XM_032913917 XP_032769808 protein-coding 626016510 Uaca uveal autoantigen with coiled-coil domains and ankyrin repeats ENCODES a protein that exhibits transcription regulator inhibitor activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apoptosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 55084806 55172677 + 30032202 116906741 MODEL JAAIVD010000027;XM_032909561 XP_032765452 protein-coding 626016533 Egflam EGF like, fibronectin type III and laminin G domains ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); extracellular matrix (ortholog) 3 173095507 173268514 + 22301074 116897144 MODEL JAAIVD010000012;XM_032898808;XM_032898809;XM_032898810 XP_032754699;XP_032754700;XP_032754701 pikachurin protein-coding 626016564 Sox13 SRY-box transcription factor 13 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN gamma-delta T cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 2416975 2460906 + 30032202 116911292 MODEL JAAIVD010000005;XM_032915200 XP_032771091 transcription factor SOX-13 protein-coding 626016582 LOC116913929 non-POU domain-containing octamer-binding protein-like 12 33588082 33589571 + 116913929 MODEL JAAIVD010000007 pseudo 626016583 LOC116892243 uncharacterized LOC116892243 2 158400408 158403555 + 116892243 MODEL JAAIVD010000001;XR_004386933 ncrna 626016588 Tbc1d13 TBC1 domain family member 13 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); regulation of cilium assembly (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 30032202 116889754 MODEL JAAIVD010000081;XM_032890614;XM_032890615 XP_032746505;XP_032746506 protein-coding 626016589 LOC116908089 cytochrome c oxidase subunit 5A, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); mitochondrial complex IV deficiency nuclear type 20 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 8 51407773 51419455 + 22301074;30032202 116908089 MODEL JAAIVD010000027;XM_032911372 XP_032767263 protein-coding 626016598 Otol1 otolin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN otolith mineralization (ortholog); protein homooligomerization (ortholog); FOUND IN extracellular region (ortholog) 3 82787999 82907552 - 22301074 116896783 MODEL JAAIVD010000012;XM_032898242;XM_032898243 XP_032754133;XP_032754134 otolin-1 protein-coding 626016610 LOC116889753 40S ribosomal protein S15a-like 116889753 MODEL JAAIVD010000080 pseudo 626016611 Nup155 nucleoporin 155 INVOLVED IN atrial cardiac muscle cell action potential (ortholog); miRNA processing (ortholog); mRNA export from nucleus (ortholog); ASSOCIATED WITH Familial Atrial Fibrillation 15 (ortholog); primary ovarian insufficiency (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog) 3 172349030 172401208 - 30032202 116897142 MODEL JAAIVD010000012;XM_032898804 XP_032754695 nuclear pore complex protein Nup155 protein-coding 626016650 Dnaaf11 dynein axonemal assembly factor 11 INVOLVED IN actin cytoskeleton organization (ortholog); axonemal dynein complex assembly (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); infertility (ortholog); FOUND IN apical cytoplasm (ortholog); cilium (ortholog); cytoplasm (ortholog) 1 240531154 240622155 - 22301074;30032202 116890118 MODEL JAAIVD010000025;XM_032890858 XP_032746749 Lrrc6 leucine rich repeat containing 6;protein tilB homolog protein-coding 626016666 LOC116905812 acyl-coenzyme A thioesterase 5 7 98156085 98163424 + 22301074;30032202 116905812 MODEL JAAIVD010000026;XM_032908782 XP_032764673 protein-coding 626016673 Tal2 TAL bHLH transcription factor 2 INVOLVED IN midbrain development (ortholog); multicellular organism growth (ortholog); post-embryonic development (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog) 1 97548489 97555373 + 22301074;30032202 116901836 MODEL JAAIVD010000025;XM_032904013 XP_032759904 T-cell acute lymphocytic leukemia protein 2 protein-coding 626016679 Psmc4 proteasome 26S subunit, ATPase 4 INVOLVED IN blastocyst development (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); cytosolic proteasome complex (ortholog) 2 167923149 167931625 + 22301074;30032202 116892407 MODEL JAAIVD010000001;XM_032894086 XP_032749977 26S proteasome regulatory subunit 6B protein-coding 626016694 LOC116898529 alpha-enolase-like 4 141815754 141817143 + 116898529 MODEL JAAIVD010000003 pseudo 626016695 LOC116905542 60S ribosomal protein L36-like 7 5318144 5318462 + 116905542 MODEL JAAIVD010000026 pseudo 626016696 Xkr7 XK related 7 FOUND IN plasma membrane (ortholog) 5 132352690 132377573 + 30032202 116902133 MODEL JAAIVD010000023;XM_032904460 XP_032760351 XK-related protein 7 protein-coding 626016703 LOC116901230 tubulin alpha-1C chain-like 1 89364040 89365306 + 116901230 MODEL JAAIVD010000025 pseudo 626016704 LOC116911173 intelectin-1a-like 10 50678219 50687922 + 30032202 116911173 MODEL JAAIVD010000005;XM_032915033 XP_032770924 protein-coding 626016715 LOC116910237 40S ribosomal protein S19-like 9 32997102 32997569 - 22301074;30032202 116910237 MODEL JAAIVD010000002;XM_032914127 XP_032770018 protein-coding 626016719 LOC116888062 histone H2B.1-like X 88671125 88671738 + 116888062 MODEL JAAIVD010000014 pseudo 626016720 Slc25a43 solute carrier family 25 member 43 X 102917811 102951482 + 22301074 116888120 MODEL JAAIVD010000014;XM_032889472 XP_032745363 protein-coding 626016728 LOC116909274 60S ribosomal protein L35a-like 9 9111396 9111800 + 22301074;30032202 116909274 MODEL JAAIVD010000002;XM_032912809 XP_032768700 protein-coding 626016733 LOC116897628 U6atac minor spliceosomal RNA 3 49758903 49759028 - 116897628 MODEL JAAIVD010000012;XR_004387608 snrna 626016736 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889731 MODEL JAAIVD010000065 trna 626016737 Adipor2 adiponectin receptor 2 ENCODES a protein that exhibits adipokinetic hormone receptor activity (ortholog); adiponectin binding (ortholog); identical protein binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to fatty acid (ortholog); female pregnancy (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); Chemical and Drug Induced Liver Injury (ortholog); end stage renal disease (ortholog); FOUND IN plasma membrane (ortholog) 6 27385331 27400336 + 30032202 116903342 MODEL JAAIVD010000024;XM_032905798 XP_032761689 adiponectin receptor protein 2 protein-coding 626016748 LOC116912676 proliferating cell nuclear antigen-like 11 12357498 12358819 + 116912676 MODEL JAAIVD010000006 pseudo 626016749 LOC116903701 adenosylhomocysteinase-like 6 6889581 6890961 - 116903701 MODEL JAAIVD010000024 pseudo 626016750 LOC116893049 60S ribosome subunit biogenesis protein NIP7 homolog 2 29483959 29484481 - 116893049 MODEL JAAIVD010000001 pseudo 626016751 Mpped1 metallophosphoesterase domain containing 1 ASSOCIATED WITH basal cell carcinoma (ortholog) 1 253198183 253272357 + 22301074 116914469 MODEL JAAIVD010000025;XM_032918772 XP_032774663 metallophosphoesterase domain-containing protein 1 protein-coding 626016762 Prkag2 protein kinase AMP-activated non-catalytic subunit gamma 2 ENCODES a protein that exhibits ADP binding (ortholog); AMP binding (ortholog); AMP-activated protein kinase activity (ortholog); INVOLVED IN glycogen metabolic process (ortholog); intracellular signal transduction (ortholog); regulation of catalytic activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 9 (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) 6 154061732 154224756 - 116904217 MODEL JAAIVD010000024;XM_032907148;XM_032907149;XM_032907150;XM_032907151;XM_032907152;XM_032907153;XM_032907154;XM_032907155;XM_032907156;XM_032907157;XM_032907158;XM_032907159;XM_032907160 XP_032763039;XP_032763040;XP_032763041;XP_032763042;XP_032763043;XP_032763044;XP_032763045;XP_032763046;XP_032763047;XP_032763048;XP_032763049;XP_032763050;XP_032763051 5'-AMP-activated protein kinase subunit gamma-2 protein-coding 626016810 Lrrd1 leucine rich repeats and death domain containing 1 6 136138154 136161577 + 22301074 116902987 MODEL JAAIVD010000024;XM_032905306 XP_032761197 leucine-rich repeat and death domain-containing protein 1 protein-coding 626016819 Shisa3 shisa family member 3 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 11 24718457 24723035 + 116912770 MODEL JAAIVD010000006;XM_032916921 XP_032772812 protein shisa-3 homolog protein-coding 626016825 Uck2 uridine-cytidine kinase 2 ENCODES a protein that exhibits cytidine kinase activity (ortholog); identical protein binding (ortholog); uridine kinase activity (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); CTP salvage (ortholog); feeding behavior (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Experimental Diabetes Mellitus (ortholog); lung adenocarcinoma (ortholog) 10 46544767 46602451 - 22301074;30032202 116910998 MODEL JAAIVD010000005;XM_032914716 XP_032770607 protein-coding 626016836 Asb14 ankyrin repeat and SOCS box containing 14 13 2646740 2660714 + 22301074;30032202 116914797 MODEL JAAIVD010000008;XM_032919247 XP_032775138 ankyrin repeat and SOCS box protein 14 protein-coding 626016849 LOC116911325 60S ribosomal protein L35-like 10 844090 844456 - 116911325 MODEL JAAIVD010000005 pseudo 626016850 LOC116890544 40S ribosomal protein S10-like 1 272713560 272714437 - 116890544 MODEL JAAIVD010000025 pseudo 626016851 Prickle1 prickle planar cell polarity protein 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription factor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior visceral endoderm cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive Robinow syndrome (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN cell trailing edge (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 266413427 266507192 - 22301074 116884294 MODEL JAAIVD010000025;XM_032885396;XM_032885405 XP_032741287;XP_032741296 prickle-like protein 1 protein-coding 626016866 Timp3 TIMP metallopeptidase inhibitor 3 INVOLVED IN cellular response to hypoxia (ortholog); cellular response to interleukin-6 (ortholog); cellular response to peptide (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT2 receptor; ASSOCIATED WITH asthma (ortholog); bladder disease (ortholog); breast cancer (ortholog); FOUND IN basement membrane (ortholog) 1 162267000 162316882 - 22301074;30032202 116907283 MODEL JAAIVD010000025;XM_032910237 XP_032766128 metalloproteinase inhibitor 3 protein-coding 626016875 Tubb1 tubulin beta 1 class VI ENCODES a protein that exhibits structural constituent of cytoskeleton (ortholog); INVOLVED IN microtubule polymerization (ortholog); microtubule-based process (ortholog); platelet aggregation (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); autosomal dominant isolated macrothrombocytopenia 1 (ortholog); congenital hypothyroidism (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog); microtubule (ortholog) 5 143521420 143528567 - 22301074;30032202 116900746 MODEL JAAIVD010000023;XM_032902452 XP_032758343 tubulin beta-1 chain protein-coding 626016881 LOC116912629 submaxillary gland androgen-regulated protein 3A-like 11 954325 958173 - 30032202 116912629 MODEL JAAIVD010000006;XM_032916747 XP_032772638 protein-coding 626016885 Kiaa0408 KIAA0408 ortholog 2 203583417 203617581 - 116892922 MODEL JAAIVD010000001;XM_032894848 XP_032750739 uncharacterized protein KIAA0408 homolog protein-coding 626016895 Ccnt2 cyclin T2 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN early viral transcription (ortholog); late viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 10 7904593 7938369 - 30032202 116911765 MODEL JAAIVD010000005;XM_032915756;XM_032915757;XM_032915758;XM_032915759;XM_032915760;XM_032915762;XR_004389340 XP_032771647;XP_032771648;XP_032771649;XP_032771650;XP_032771651;XP_032771653 cyclin-T2 protein-coding 626016928 Parp9 poly(ADP-ribose) polymerase family member 9 ENCODES a protein that exhibits ADP-D-ribose binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); double-strand break repair (ortholog); negative regulation of catalytic activity (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 20713621 20748937 + 22301074;30032202 116897965 MODEL JAAIVD010000003;XM_032899364 XP_032755255 protein mono-ADP-ribosyltransferase PARP9 protein-coding 626016943 LOC116899557 ATP-dependent DNA helicase DDX11-like 4 154761708 154771336 - 22301074;30032202 116899557 MODEL JAAIVD010000003;XM_032901454;XM_032901455 XP_032757345;XP_032757346 protein-coding 626016955 Alox5 arachidonate 5-lipoxygenase ENCODES a protein that exhibits arachidonate 5-lipoxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN dendritic cell migration (ortholog); glucose homeostasis (ortholog); humoral immune response (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 6 30246881 30296065 + 22301074;30032202 116903369 MODEL JAAIVD010000024;XM_032905854 XP_032761745 protein-coding 626016973 LOC116902684 uncharacterized LOC116902684 1 132120414 132123674 - 116902684 MODEL JAAIVD010000025 pseudo 626016974 LOC116899902 small nucleolar RNA SNORA17 4 46055957 46056085 - 116899902 MODEL JAAIVD010000003;XR_004387875 snorna 626016977 Masp2 MBL associated serine protease 2 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); complement component C4b binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, lectin pathway (ortholog); ASSOCIATED WITH erythema multiforme (ortholog); hypersensitivity reaction type III disease (ortholog); Inflammation (ortholog); FOUND IN symbiont cell surface (ortholog) 1 12160089 12173027 - 22301074;30032202 116890259 MODEL JAAIVD010000025;XM_032890982 XP_032746873 mannan binding lectin serine peptidase 2;mannan-binding lectin serine protease 2 protein-coding 626016991 LOC116888792 tubulin polyglutamylase complex subunit 2-like X 87498996 87499893 - 116888792 MODEL JAAIVD010000014 pseudo 626016992 Pum1 pumilio RNA binding family member 1 ENCODES a protein that exhibits miRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); miRNA processing (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH cerebellar ataxia type 47 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 1 27543757 27662792 - 30032202 116895818 MODEL JAAIVD010000025;XM_032896950;XM_032896951;XM_032896954;XM_032896955;XM_032896957;XM_032896960;XM_032896963;XM_032896969;XM_032896971;XM_032896975;XM_032896979;XM_032896981;XM_032896983;XM_032896988 XP_032752841;XP_032752842;XP_032752845;XP_032752846;XP_032752848;XP_032752851;XP_032752854;XP_032752860;XP_032752862;XP_032752866;XP_032752870;XP_032752872;XP_032752874;XP_032752879 pumilio homolog 1 protein-coding 626017041 LOC116887636 dead end protein homolog 1-like 18 11203400 11206402 + 116887636 MODEL JAAIVD010000013 pseudo 626017042 LOC116884363 galectin-1-like 15 40115682 40116169 + 116884363 MODEL JAAIVD010000010 pseudo 626017043 Cdv3 CDV3 homolog FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 8 94652880 94666081 - 30032202 116907409 MODEL JAAIVD010000027;XM_032910366;XM_032910367 XP_032766257;XP_032766258 protein CDV3 homolog protein-coding 626017056 Chchd5 coiled-coil-helix-coiled-coil-helix domain containing 5 FOUND IN mitochondrion (ortholog) 5 107898167 107901719 + 116901956 MODEL JAAIVD010000023;XM_032904193 XP_032760084 coiled-coil-helix-coiled-coil-helix domain-containing protein 5 protein-coding 626017064 LOC116912706 WD repeat-containing protein 82-like 11 19725618 19727827 - 22301074;30032202 116912706 MODEL JAAIVD010000006;XM_032916833 XP_032772724 protein-coding 626017069 Glrx5 glutaredoxin 5 INVOLVED IN [2Fe-2S] cluster assembly (ortholog); protein maturation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH autosomal recessive pyridoxine-refractory sideroblastic anemia 2 (ortholog); autosomal recessive pyridoxine-refractory sideroblastic anemia 3 (ortholog); Childhood-Onset Spasticity with Hyperglycinemia (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); mitochondrial matrix (ortholog) 7 116129641 116138712 + 116905389 MODEL JAAIVD010000026;XM_032908335 XP_032764226 glutaredoxin-related protein 5, mitochondrial protein-coding 626017075 Ercc1 ERCC excision repair 1, endonuclease non-catalytic subunit ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN cell development (ortholog); cell population proliferation (ortholog); chromosome organization (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog); nucleoplasm (ortholog) 2 171264660 171275263 - 30032202 116892536 MODEL JAAIVD010000001;XM_032894297 XP_032750188 DNA excision repair protein ERCC-1 protein-coding 626017089 LOC116897486 small nucleolar RNA SNORA70 3 122246357 122246478 - 116897486 MODEL JAAIVD010000012 pseudo 626017090 LOC116900726 fer-1-like protein 4 5 135380542 135417564 - 22301074;30032202 116900726 MODEL JAAIVD010000023;XM_032902432 XP_032758323 protein-coding 626017138 Cherp calcium homeostasis endoplasmic reticulum protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); sarcoplasmic reticulum membrane (ortholog) 13 14282791 14295216 - 22301074;30032202 116914294 MODEL JAAIVD010000008;XM_032918533;XM_032918534;XM_032918535 XP_032774424;XP_032774425;XP_032774426 protein-coding 626017166 Zdhhc19 zDHHC palmitoyltransferase 19 ENCODES a protein that exhibits protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); positive regulation of aggrephagy (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi membrane (ortholog); perinucleolar compartment (ortholog) 4 17307622 17318774 + 30032202 116897855 MODEL JAAIVD010000003;XM_032899263 XP_032755154 palmitoyltransferase ZDHHC19;zinc finger DHHC-type palmitoyltransferase 19 protein-coding 626017179 LOC116889487 U11 spliceosomal RNA X 53033623 53033755 + 116889487 MODEL JAAIVD010000014;XR_004386438 snrna 626017182 Pfdn5 prefoldin subunit 5 ENCODES a protein that exhibits amyloid-beta binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); intermediate filament cytoskeleton (ortholog); prefoldin complex (ortholog) 1 260751378 260755993 - 22301074;30032202 116883503 MODEL JAAIVD010000025;XM_032884674 XP_032740565 protein-coding 626017192 Iho1 interactor of HORMAD1 1 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation (ortholog); oogenesis (ortholog); FOUND IN condensed nuclear chromosome (ortholog) 8 99733574 99755073 - 22301074;30032202 116907222 MODEL JAAIVD010000027;XM_032910186 XP_032766077 interactor of HORMAD1 protein 1 protein-coding 626017202 Fn3k fructosamine 3 kinase ENCODES a protein that exhibits protein-fructosamine 3-kinase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fructosamine metabolic process (ortholog); protein deglycation (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 9 62584439 62598684 - 30032202 116909954 MODEL JAAIVD010000002;XM_032913730 XP_032769621 fructosamine-3-kinase protein-coding 626017212 ATP6 ATP synthase F0 subunit 6 MT 7912 8592 + 7751804 B7SE66 REVIEWED EU273707 ABX45238;YP_002791021 protein-coding 626017213 Kiaa0930 KIAA0930 ortholog ASSOCIATED WITH COVID-19 (ortholog); Neurodevelopmental Disorders (ortholog) 1 254329946 254367298 - 116914601 MODEL JAAIVD010000025;XM_032918966 XP_032774857 uncharacterized protein KIAA0930 homolog protein-coding 626017227 Eif4a3 eukaryotic translation initiation factor 4A3 ENCODES a protein that exhibits ATP binding (ortholog); mRNA binding (ortholog); poly(A) binding (ortholog); INVOLVED IN associative learning (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to selenite ion (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); pancreatic cancer (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 64731111 64741353 + 22301074;30032202 116908745 MODEL JAAIVD010000002;XM_032912096 XP_032767987 eukaryotic initiation factor 4A-III protein-coding 626017243 Sav1 salvador family WW domain containing protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein serine/threonine kinase activator activity (ortholog); transcription regulator activator activity (ortholog); INVOLVED IN hair follicle development (ortholog); hippo signaling (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH colonic disease (ortholog); hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 83658100 83679007 - 22301074;30032202 116905127 MODEL JAAIVD010000026;XM_032907872 XP_032763763 protein salvador homolog 1 protein-coding 626017252 Plek pleckstrin ENCODES a protein that exhibits phosphatase activator activity (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell projection organization (ortholog); cortical actin cytoskeleton organization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); osteoporosis (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); ruffle membrane (ortholog) 11 85483814 85510205 - 22301074;30032202 116912339 MODEL JAAIVD010000006;XM_032916388 XP_032772279 protein-coding 626017264 LOC116904259 T-complex protein 1 subunit gamma-like 6 33181367 33184591 + 116904259 MODEL JAAIVD010000024 pseudo 626017265 Defb116 defensin beta 116 5 131856990 131858430 - 22301074 116900697 MODEL JAAIVD010000023;XM_032902399 XP_032758290 beta-defensin 116 protein-coding 626017271 Ubash3a ubiquitin associated and SH3 domain containing A INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH sclerosing cholangitis (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 18 2634246 2670507 - 22301074;30032202 116887159 MODEL JAAIVD010000013;XM_032888707;XM_032888708 XP_032744598;XP_032744599 ubiquitin-associated and SH3 domain-containing protein A protein-coding 626017292 LOC116895955 60S ribosomal protein L34-like 3 142136459 142136811 + 116895955 MODEL JAAIVD010000012 pseudo 626017293 Sugp2 SURP and G-patch domain containing 2 FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 13 12499066 12523702 + 22301074;30032202 116915090 MODEL JAAIVD010000008;XM_032919517;XM_032919518;XR_004389796 XP_032775408;XP_032775409 SURP and G-patch domain-containing protein 2 protein-coding 626017311 Kif7 kinesin family member 7 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); cerebellar ataxia (ortholog); ciliopathy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary tip (ortholog); cilium (ortholog) 2 120532566 120549134 + 22301074;30032202 116891939 MODEL JAAIVD010000001;XM_032893380 XP_032749271 kinesin-like protein KIF7 protein-coding 626017334 Agpat4 1-acylglycerol-3-phosphate O-acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN phospholipid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog) 2 190859010 190962236 + 30032202 116892822 MODEL JAAIVD010000001;XM_032894707 XP_032750598 1-acyl-sn-glycerol-3-phosphate acyltransferase delta protein-coding 626017347 LOC116889139 sex comb on midleg-like protein 2 X 67993985 68074376 - 22301074 116889139 MODEL JAAIVD010000014;XM_032890311 XP_032746202 protein-coding 626017374 LOC116899879 small nucleolar RNA SNORA17 4 125667439 125667570 + 116899879 MODEL JAAIVD010000003;XR_004387868 snorna 626017377 Vrk3 VRK serine/threonine kinase 3 ENCODES a protein that exhibits protein phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 154755761 154783581 - 22301074;30032202 116892196 MODEL JAAIVD010000001;XM_032893728;XM_032893729;XM_032893730;XM_032893731;XM_032893732;XM_032893733 XP_032749619;XP_032749620;XP_032749621;XP_032749622;XP_032749623;XP_032749624 inactive serine/threonine-protein kinase VRK3 protein-coding 626017414 LOC116889217 BTB/POZ domain-containing protein KCTD12-like X 18111692 18118859 + 22301074;30032202 116889217 MODEL JAAIVD010000014;XM_032890367 XP_032746258 protein-coding 626017421 Rom1 retinal outer segment membrane protein 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); detection of light stimulus involved in visual perception (ortholog); photoreceptor cell outer segment organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); macular degeneration (ortholog); optic atrophy (ortholog); FOUND IN photoreceptor outer segment (ortholog); photoreceptor outer segment membrane (ortholog) 2 9012857 9015312 + 22301074 116890914 MODEL JAAIVD010000001;XM_032891543 XP_032747434 rod outer segment membrane protein 1 protein-coding 626017428 LOC116913159 40S ribosomal protein S2-like 12 45834895 45852751 - 116913159 MODEL JAAIVD010000007 pseudo 626017429 Trpt1 tRNA phosphotransferase 1 ENCODES a protein that exhibits tRNA 2'-phosphotransferase activity (ortholog); INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog) 2 796574 799488 - 30032202 116894807 MODEL JAAIVD010000001;XM_032896472 XP_032752363 tRNA 2'-phosphotransferase 1 protein-coding 626017440 LOC116907920 60S ribosomal protein L5-like 8 111039323 111040273 + 22301074;30032202 116907920 MODEL JAAIVD010000027;XM_032911131 XP_032767022 protein-coding 626017445 LOC116911330 cytochrome c oxidase assembly protein COX20, mitochondrial INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 10 56665183 56670974 + 22301074;30032202 116911330 MODEL JAAIVD010000005;XM_032915248 XP_032771139 protein-coding 626017453 LOC116894752 Y-box-binding protein 1-like 2 144948836 144949675 + 116894752 MODEL JAAIVD010000001 pseudo 626017454 LOC116888008 fibronectin type III domain containing protein 3C1-like X 78783042 78814421 - 22301074 116888008 MODEL JAAIVD010000014;XM_032889426 XP_032745317 protein-coding 626017476 Ehmt1 euchromatic histone lysine methyltransferase 1 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K9 dimethyltransferase activity (ortholog); INVOLVED IN beige fat cell differentiation (ortholog); brown fat cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autistic disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 5 12269063 12415449 + 22301074;30032202 116901334 MODEL JAAIVD010000023;XM_032903156;XM_032903157;XM_032903158;XM_032903159;XM_032903160;XM_032903162;XM_032903163 XP_032759047;XP_032759048;XP_032759049;XP_032759050;XP_032759051;XP_032759053;XP_032759054 histone-lysine N-methyltransferase EHMT1 protein-coding 626017521 LOC116902809 putative vomeronasal receptor-like protein 4 6 83797328 83798236 + 22301074;30032202 116902809 MODEL JAAIVD010000024;XM_032905142 XP_032761033 protein-coding 626017524 LOC116895256 olfactory receptor 2AG2-like 3 346443 347393 + 22301074 116895256 MODEL JAAIVD010000012;XM_032896575 XP_032752466 protein-coding 626017527 Sfswap splicing factor SWAP INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); mRNA 5'-splice site recognition (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) 16 24400485 24470880 - 22301074;30032202 116885814 MODEL JAAIVD010000004;XM_032887154;XM_032887155;XM_032887156 XP_032743045;XP_032743046;XP_032743047 splicing factor, suppressor of white-apricot homolog protein-coding 626017554 LOC116898377 EKC/KEOPS complex subunit GON7-like 4 68552776 68553090 - 22301074;30032202 116898377 MODEL JAAIVD010000003;XM_032899683 XP_032755574 protein-coding 626017557 LOC116890429 U7 small nuclear RNA 1 57568835 57568897 - 116890429 MODEL JAAIVD010000025;XR_004386627 snrna 626017560 Degs1 delta 4-desaturase, sphingolipid 1 ENCODES a protein that exhibits retinol isomerase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); myelin maintenance (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 18 (ortholog); leukodystrophy (ortholog); FOUND IN mitochondrion (ortholog) 10 60559286 60568302 - 22301074;30032202 116911331 MODEL JAAIVD010000005;XM_032915249 XP_032771140 sphingolipid delta(4)-desaturase DES1 protein-coding 626017567 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 840621 840693 - 116910818 MODEL JAAIVD010000002 trna 626017568 LOC116910711 small nucleolar RNA SNORA17 9 7515887 7516014 - 116910711 MODEL JAAIVD010000002;XR_004389238 snorna 626017571 LOC116914876 40S ribosomal protein S20-like 13 57141780 57142206 + 116914876 MODEL JAAIVD010000008 pseudo 626017572 Kcnj8 potassium inwardly rectifying channel subfamily J member 8 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); ATPase-coupled monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN action potential (ortholog); adaptive immune response (ortholog); apoptotic process (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 1 (ortholog); coronary artery disease (ortholog); FOUND IN glutamatergic synapse (ortholog); inward rectifying potassium channel (ortholog); myofibril (ortholog) 6 314859 320528 - 22301074;30032202 116904506 MODEL JAAIVD010000024;XM_032907296 XP_032763187 ATP-sensitive inward rectifier potassium channel 8 protein-coding 626017578 LOC116890272 PRAME family member 27-like 1 14651943 14654667 - 116890272 MODEL JAAIVD010000025 pseudo 626017579 LOC116914854 ral guanine nucleotide dissociation stimulator-like 13 11825339 11826758 + 116914854 MODEL JAAIVD010000008;XM_032919304 XP_032775195 protein-coding 626017584 LOC116911042 uncharacterized LOC116911042 10 58693402 58696819 - 116911042 MODEL JAAIVD010000005;XR_004389306 ncrna 626017588 LOC116891970 uncharacterized LOC116891970 2 126942222 126955073 + 116891970 MODEL JAAIVD010000001;XR_004386883 ncrna 626017595 Frmpd4 FERM and PDZ domain containing 4 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN positive regulation of synapse structural plasticity (ortholog); postsynaptic actin cytoskeleton organization (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) X 29316836 29944591 + 22301074 116888414 MODEL JAAIVD010000014;XM_032889687 XP_032745578 FERM and PDZ domain-containing protein 4 protein-coding 626017616 Cysrt1 cysteine rich tail 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN biological process involved in interaction with symbiont (ortholog); establishment of skin barrier (ortholog); FOUND IN cornified envelope (ortholog) 5 11942868 11943538 + 116900100 MODEL JAAIVD010000023;XM_032901879 XP_032757770 cysteine-rich tail protein 1 protein-coding 626017621 LOC116901381 low-density lipoprotein receptor-related protein 1B-like 5 18922257 19308724 + 22301074 116901381 MODEL JAAIVD010000023;XM_032903248 XP_032759139 protein-coding 626017627 LOC116912981 small nucleolar RNA SNORA17 11 35414248 35414377 + 116912981 MODEL JAAIVD010000006;XR_004389546 snorna 626017630 LOC116888151 glyceraldehyde-3-phosphate dehydrogenase-like X 111204407 111204781 + 22301074;30032202 116888151 MODEL JAAIVD010000014;XM_032889479 XP_032745370 protein-coding 626017633 LOC116886911 uncharacterized LOC116886911 18 24306867 24335282 - 116886911 MODEL JAAIVD010000013;XR_004386194 ncrna 626017639 Lancl3 LanC like family member 3 X 11900009 11925217 - 22301074;30032202 116888606 MODEL JAAIVD010000014;XM_032889906 XP_032745797 LanC like 3;lanC-like protein 3 protein-coding 626017647 LOC116913286 polypeptide N-acetylgalactosaminyltransferase 12-like 12 89528828 89530193 - 116913286 MODEL JAAIVD010000007 pseudo 626017648 LOC116895460 ribosome biogenesis protein NSA2 homolog 3 82996055 82996830 - 116895460 MODEL JAAIVD010000012 pseudo 626017649 LOC116910022 C-type lectin domain family 10 member A 9 49763246 49766236 + 30032202 116910022 MODEL JAAIVD010000002;XM_032913804;XM_032913805 XP_032769695;XP_032769696 protein-coding 626017666 LOC116909846 carbonyl reductase [NADPH] 2-like 9 63262500 63264418 - 30032202 116909846 MODEL JAAIVD010000002;XM_032913572 XP_032769463 protein-coding 626017676 LOC116892080 uncharacterized LOC116892080 2 151229316 151308591 + 116892080 MODEL JAAIVD010000001;XR_004386909;XR_004386910 ncrna 626017684 Cadm1 cell adhesion molecule 1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); PDZ domain binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); bone development (ortholog); calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules (ortholog); ASSOCIATED WITH autistic disorder (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); cell body fiber (ortholog) 8 42025132 42343810 + 30032202 116906566 MODEL JAAIVD010000027;XM_032909283;XM_032909284;XM_032909285;XM_032909286;XM_032909287 XP_032765174;XP_032765175;XP_032765176;XP_032765177;XP_032765178 protein-coding 626017708 Kirrel3 kirre like nephrin family adhesion molecule 3 INVOLVED IN glomerulus morphogenesis (ortholog); hemopoiesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 4 (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 8 30059478 30602308 + 30032202 116907405 MODEL JAAIVD010000027;XM_032910358;XM_032910359;XM_032910361;XM_032910362 XP_032766249;XP_032766250;XP_032766252;XP_032766253 kin of IRRE-like protein 3 protein-coding 626017733 LOC116901904 40S ribosomal protein S14-like 5 103919263 103919674 + 22301074;30032202 116901904 MODEL JAAIVD010000023;XM_032904118 XP_032760009 protein-coding 626017738 Ldb1 LIM domain binding 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH nail-patella syndrome (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cell leading edge (ortholog); chromatin (ortholog) 2 45500720 45513906 - 30032202 116891235 MODEL JAAIVD010000001;XM_032892088;XM_032892089;XM_032892090 XP_032747979;XP_032747980;XP_032747981 LIM domain-binding protein 1 protein-coding 626017758 Ampd2 adenosine monophosphate deaminase 2 ENCODES a protein that exhibits AMP deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN AMP metabolic process (ortholog); ATP metabolic process (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytosol (ortholog) 3 50174023 50185703 + 22301074;30032202 116896373 MODEL JAAIVD010000012;XM_032897493;XM_032897494;XM_032897495 XP_032753384;XP_032753385;XP_032753386 AMP deaminase 2 protein-coding 626017786 LOC116899248 ferritin light chain 1-like 4 98869304 98869850 + 116899248 MODEL JAAIVD010000003 pseudo 626017787 Lonp1 lon peptidase 1, mitochondrial ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); mitochondrion organization (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH brain ischemia (ortholog); cataract (ortholog); CODAS syndrome (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 4 87989817 88002307 - 22301074;30032202 116899187 MODEL JAAIVD010000003;XM_032900767 XP_032756658 lon protease homolog, mitochondrial protein-coding 626017809 LOC116913399 40S ribosomal protein S6-like 12 8537856 8538720 + 116913399 MODEL JAAIVD010000007 pseudo 626017810 LOC116900371 olfactory receptor 5W2-like 5 69472574 69473622 + 22301074;30032202 116900371 MODEL JAAIVD010000023;XM_032902120 XP_032758011 protein-coding 626017815 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889668 MODEL JAAIVD010000045 trna 626017816 Calcrl calcitonin receptor like receptor ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); brain infarction (ortholog); COVID-19 (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); CGRP receptor complex (ortholog); cytoplasm (ortholog) 5 61737771 61782949 - 22301074;30032202 116901578 MODEL JAAIVD010000023;XM_032903576 XP_032759467 calcitonin gene-related peptide type 1 receptor protein-coding 626017833 Serpinb7 serpin family B member 7 INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); positive regulation of glomerular mesangial cell proliferation (ortholog); positive regulation of platelet-derived growth factor production (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); familial encephalopathy with neuroserpin inclusion bodies (ortholog); genetic disease (ortholog) 4 119607878 119643230 - 30032202 116898482 MODEL JAAIVD010000003;XM_032899729 XP_032755620 serpin B7 protein-coding 626017843 Il16 interleukin 16 ENCODES a protein that exhibits CD4 receptor binding (ortholog); cytokine activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); induction of positive chemotaxis (ortholog); leukocyte chemotaxis (ortholog); ASSOCIATED WITH allergic disease (ortholog); borna disease (ortholog); Brain Injuries (ortholog); FOUND IN cytosol (ortholog); Flemming body (ortholog); focal adhesion (ortholog) 2 116606788 116686078 + 22301074;30032202 116891884 MODEL JAAIVD010000001;XM_032893295 XP_032749186 pro-interleukin-16 protein-coding 626017866 Agap3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3 ENCODES a protein that exhibits GTPase activity (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein import into nucleus (ortholog); FOUND IN cell periphery (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 6 153647685 153698261 + 22301074;30032202 116904211 MODEL JAAIVD010000024;XM_032907136;XM_032907137;XM_032907138;XM_032907139;XM_032907141;XM_032907142 XP_032763027;XP_032763028;XP_032763029;XP_032763030;XP_032763032;XP_032763033 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3 protein-coding 626017907 LOC116900838 E3 ubiquitin-protein ligase RBX1-like 5 50898660 50899048 - 116900838 MODEL JAAIVD010000023 pseudo 626017908 LOC116906212 Ig heavy chain V region PJ14-like 7 121344313 121344796 + 116906212 MODEL JAAIVD010000026 pseudo 626017909 LOC116897378 U4 spliceosomal RNA 3 366533 366683 + 116897378 MODEL JAAIVD010000012 pseudo 626017910 LOC116891942 uncharacterized LOC116891942 2 120722058 120740497 - 116891942 MODEL JAAIVD010000001;XR_004386871;XR_004386872;XR_004386873 ncrna 626017920 LOC116891810 rRNA 2'-O-methyltransferase fibrillarin-like 2 12546779 12559334 - 116891810 MODEL JAAIVD010000001 pseudo 626017921 LOC116903221 sentrin-specific protease 2-like 6 19589512 19590969 + 30032202 116903221 MODEL JAAIVD010000024;XM_032905597 XP_032761488 protein-coding 626017925 Cxcl14 C-X-C motif chemokine ligand 14 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); inner ear development (ortholog); killing of cells of another organism (ortholog); ASSOCIATED WITH asthma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); contact dermatitis (ortholog); FOUND IN Golgi apparatus (ortholog) 14 81785324 81793435 + 22301074;30032202 116883782 MODEL JAAIVD010000009;XM_032885024 XP_032740915 C-X-C motif chemokine 14 protein-coding 626017933 ND3 NADH dehydrogenase subunit 3 MT 9443 9790 + 7751806 B7SE68 REVIEWED EU273707 ABX45240;YP_002791023 protein-coding 626017934 LOC116887494 40S ribosomal protein S2-like 18 9296884 9297473 + 116887494 MODEL JAAIVD010000013 pseudo 626017935 Metrn meteorin, glial cell differentiation regulator INVOLVED IN positive regulation of axonogenesis (ortholog); radial glial cell differentiation (ortholog); FOUND IN extracellular space (ortholog) 9 3060566 3062985 - 30032202 116908656 MODEL JAAIVD010000002;XM_032911931 XP_032767822 meteorin protein-coding 626017943 Efhd2 EF-hand domain family member D2 ENCODES a protein that exhibits calcium ion binding (ortholog); ASSOCIATED WITH Binge Drinking (ortholog) 1 16287831 16304052 + 22301074;30032202 116893193 MODEL JAAIVD010000025;XM_032895094 XP_032750985 EF-hand domain-containing protein D2 protein-coding 626017951 LOC116914965 enoyl-CoA delta isomerase 2, mitochondrial-like 13 15993394 15995350 + 116914965 MODEL JAAIVD010000008 pseudo 626017952 LOC116915119 5S ribosomal RNA 13 60390968 60391086 + 116915119 MODEL JAAIVD010000008;XR_004389800 rrna 626017955 LOC116907984 olfactory receptor 8D4 8 82907146 82908105 - 22301074;30032202 116907984 MODEL JAAIVD010000027;XM_032911229 XP_032767120 protein-coding 626017959 LOC116888573 T-complex protein 1 subunit gamma-like X 65104068 65105678 + 116888573 MODEL JAAIVD010000014 pseudo 626017960 Twist2 twist family bHLH transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN cornea development in camera-type eye (ortholog); embryonic cranial skeleton morphogenesis (ortholog); face morphogenesis (ortholog); ASSOCIATED WITH ablepharon macrostomia syndrome (ortholog); Barber-Say syndrome (ortholog); Focal Facial Dermal Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 4 163777566 163823560 + 22301074;30032202 116898267 MODEL JAAIVD010000003;XM_032899620 XP_032755511 twist-related protein 2 protein-coding 626017965 LOC116911663 60S ribosomal protein L36a-like 10 4227551 4227854 - 116911663 MODEL JAAIVD010000005 pseudo 626017966 LOC116888528 ubiquitin-like protein ATG12 X 55259688 55260016 + 116888528 MODEL JAAIVD010000014;XM_032889824 XP_032745715 protein-coding 626017970 LOC116887258 H-2 class I histocompatibility antigen, L-D alpha chain-like 18 10188066 10192302 + 30032202 116887258 MODEL JAAIVD010000013;XM_032888824;XM_032888825;XM_032888826 XP_032744715;XP_032744716;XP_032744717 protein-coding 626017989 LOC116897472 U1 spliceosomal RNA 3 125429268 125429423 - 116897472 MODEL JAAIVD010000012;XR_004387498 snrna 626017992 LOC116913003 small nucleolar RNA SNORA17 11 45255851 45255972 + 116913003 MODEL JAAIVD010000006 pseudo 626017993 C9H5orf15 chromosome 9 C5orf15 homolog 9 34891100 34903881 + 116909429 MODEL JAAIVD010000002;XM_032913004 XP_032768895 keratinocyte-associated transmembrane protein 2 protein-coding 626018000 LOC116907171 basic leucine zipper and W2 domain-containing protein 1-like 8 114902085 114903658 + 116907171 MODEL JAAIVD010000027 pseudo 626018001 LOC116903995 uncharacterized LOC116903995 6 108265488 108386213 - 116903995 MODEL JAAIVD010000024;XR_004388323;XR_004388324 ncrna 626018009 Traf3ip3 TRAF3 interacting protein 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 10 71157747 71180218 - 116911426 MODEL JAAIVD010000005;XM_032915391 XP_032771282 TRAF3-interacting JNK-activating modulator protein-coding 626018027 LOC116898549 putative coiled-coil domain-containing protein 195 4 153453091 153473074 - 116898549 MODEL JAAIVD010000003;XM_032899761 XP_032755652 protein-coding 626018032 LOC116910430 40S ribosomal protein S2-like 9 72298643 72299540 - 116910430 MODEL JAAIVD010000002 pseudo 626018033 Krt20 keratin 20 INVOLVED IN cellular response to starvation (ortholog); intermediate filament organization (ortholog); regulation of protein secretion (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Cecal Neoplasms (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intermediate filament cytoskeleton (ortholog) 9 55005708 55015239 + 22301074;30032202 116909732 MODEL JAAIVD010000002;XM_032913408 XP_032769299 keratin, type I cytoskeletal 20 protein-coding 626018045 LOC116904741 small nucleolar RNA SNORA17 6 151631236 151631356 - 116904741 MODEL JAAIVD010000024 pseudo 626018046 Znf648 zinc finger protein 648 10 33639382 33641163 + 116911487 MODEL JAAIVD010000005;XM_032915469 XP_032771360 protein-coding 626018051 LOC116894040 olfactory receptor 52B4-like 2 102444733 102445677 + 22301074 116894040 MODEL JAAIVD010000001;XM_032895760 XP_032751651 protein-coding 626018054 LOC116893153 zinc finger protein 844-like 2 100919421 100923034 - 116893153 MODEL JAAIVD010000001 pseudo 626018055 LOC116899899 small nucleolar RNA SNORA17 4 101047630 101047738 - 116899899 MODEL JAAIVD010000003 pseudo 626018056 Tshz2 teashirt zinc finger homeobox 2 INVOLVED IN regulation of gene expression (ortholog); ASSOCIATED WITH COVID-19 (ortholog); syndromic microphthalmia 5 (ortholog) 5 148019082 148282138 - 22301074;30032202 116902295 MODEL JAAIVD010000023;XM_032904732 XP_032760623 teashirt homolog 2 protein-coding 626018062 LOC116895851 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 3 88334233 88334952 - 116895851 MODEL JAAIVD010000012 pseudo 626018063 LOC116902817 uncharacterized LOC116902817 1 119275792 119441626 + 116902817 MODEL JAAIVD010000025;XR_004388237 ncrna 626018068 LOC116883598 serpin B6-like 14 52405131 52423497 - 30032202 116883598 MODEL JAAIVD010000009;XM_032884779;XM_032884780 XP_032740670;XP_032740671 protein-coding 626018082 LOC116900744 cytochrome P450 2B1 5 142773505 142801317 - 22301074;30032202 116900744 MODEL JAAIVD010000023;XM_032902448;XM_032902449;XM_032902451 XP_032758339;XP_032758340;XP_032758342 protein-coding 626018103 Lhfpl1 LHFPL tetraspan subfamily member 1 1 98886732 98928894 - 30032202 116888655 MODEL JAAIVD010000025;XM_032889951;XM_032889958 XP_032745842;XP_032745849 LHFPL tetraspan subfamily member 1 protein protein-coding 626018111 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 101264618 101264690 - 116904858 MODEL JAAIVD010000024 trna 626018112 Neil3 nei like DNA glycosylase 3 ENCODES a protein that exhibits bubble DNA binding (ortholog); DNA N-glycosylase activity (ortholog); DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); INVOLVED IN base-excision repair (ortholog); single strand break repair (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 34532641 34583728 - 22301074;30032202 116914552 MODEL JAAIVD010000008;XM_032918902 XP_032774793 endonuclease 8-like 3 protein-coding 626018126 Zfyve9 zinc finger FYVE-type containing 9 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; FOUND IN cytosol (ortholog); early endosome membrane (ortholog); protein-containing complex (ortholog) 1 46077461 46232495 + 22301074;30032202 116899074 MODEL JAAIVD010000025;XM_032900566;XM_032900575;XM_032900583 XP_032756457;XP_032756466;XP_032756474 zinc finger FYVE domain-containing protein 9 protein-coding 626018155 Btbd18 BTB domain containing 18 INVOLVED IN male meiosis I (ortholog); piRNA transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 5 62043400 62049570 + 22301074;30032202 116900224 MODEL JAAIVD010000023;XM_032901976 XP_032757867 BTB/POZ domain-containing protein 18 protein-coding 626018159 LOC116889940 testin-like 1 161198866 161200203 - 22301074 116889940 MODEL JAAIVD010000025;XM_032890748 XP_032746639 protein-coding 626018164 Siglec15 sialic acid binding Ig like lectin 15 INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of bone resorption (ortholog); regulation of osteoclast development (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 15 54105041 54111673 + 30032202 116884383 MODEL JAAIVD010000010;XM_032885497 XP_032741388 sialic acid-binding Ig-like lectin 15 protein-coding 626018173 LOC116912533 serine protease Do-like HtrB 11 69420547 69427062 + 22301074 116912533 MODEL JAAIVD010000006;XM_032916637 XP_032772528 protein-coding 626018181 LOC116900614 solute carrier organic anion transporter family member 6A1-like 5 104898135 104971959 - 22301074;30032202 116900614 MODEL JAAIVD010000023;XM_032902333 XP_032758224 protein-coding 626018199 Irf3 interferon regulatory factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH asthma (ortholog); bacterial pneumonia (ortholog); Herpes Simplex Encephalitis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 154542631 154547472 - 22301074;30032202 116892177 MODEL JAAIVD010000001;XM_032893687;XM_032893688;XM_032893689;XM_032893690;XM_032893691 XP_032749578;XP_032749579;XP_032749580;XP_032749581;XP_032749582 protein-coding 626018221 LOC116914717 40S ribosomal protein S24-like 13 7028757 7029132 - 116914717 MODEL JAAIVD010000008 pseudo 626018222 Slx4ip SLX4 interacting protein 5 116481356 116652325 + 116902021 MODEL JAAIVD010000023;XM_032904294;XM_032904295 XP_032760185;XP_032760186 protein SLX4IP protein-coding 626018235 LOC116892231 zinc finger protein 883-like 2 155811279 155823892 - 30032202 116892231 MODEL JAAIVD010000001;XM_032893797;XM_032893798;XM_032893800;XM_032893801;XM_032893802 XP_032749688;XP_032749689;XP_032749691;XP_032749692;XP_032749693 protein-coding 626018255 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 50834945 50835017 - 116910783 MODEL JAAIVD010000002 trna 626018256 F2rl3 F2R like thrombin or trypsin receptor 3 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN platelet activation (ortholog); platelet aggregation (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 4; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); peliosis hepatis (ortholog); FOUND IN plasma membrane (ortholog) 13 19761025 19763026 - 22301074;30032202 116915023 MODEL JAAIVD010000008;XM_032919431 XP_032775322 proteinase-activated receptor 4 protein-coding 626018261 LOC116902472 U6 spliceosomal RNA 5 125975683 125975785 + 116902472 MODEL JAAIVD010000023;XR_004388090 snrna 626018264 LOC116901574 cadherin-12-like 5 60442038 60676590 + 22301074;30032202 116901574 MODEL JAAIVD010000023;XM_032903570;XM_032903571 XP_032759461;XP_032759462 protein-coding 626018275 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92663948 92664019 + 116904834 MODEL JAAIVD010000024 trna 626018276 Immp1l inner mitochondrial membrane peptidase subunit 1 PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) 5 83849545 83878094 + 22301074;30032202 116901717 MODEL JAAIVD010000023;XM_032903848 XP_032759739 mitochondrial inner membrane protease subunit 1 protein-coding 626018285 LOC116886003 small nucleolar RNA SNORA27 16 7056379 7056507 - 116886003 MODEL JAAIVD010000004;XR_004386075 snorna 626018288 Stpg1 sperm tail PG-rich repeat containing 1 INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog) 1 22687006 22720599 - 30032202 116890286 MODEL JAAIVD010000025;XM_032890998 XP_032746889 O(6)-methylguanine-induced apoptosis 2 protein-coding 626018299 Svop SV2 related protein FOUND IN synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 16 39874961 39935285 + 22301074 116885410 MODEL JAAIVD010000004;XM_032886696 XP_032742587 synaptic vesicle 2-related protein protein-coding 626018319 LOC116883847 uncharacterized LOC116883847 14 60763471 60780626 + 116883847 MODEL JAAIVD010000009 pseudo 626018320 LOC116883155 glyceraldehyde-3-phosphate dehydrogenase-like 1 196848356 196850528 + 116883155 MODEL JAAIVD010000025 pseudo 626018321 Emilin3 elastin microfibril interfacer 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN cytoplasm (ortholog) 5 140198025 140202843 - 22301074;30032202 116900737 MODEL JAAIVD010000023;XM_032902442;XM_032902443 XP_032758333;XP_032758334 EMILIN-3 protein-coding 626018331 Mns1 meiosis specific nuclear structural 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); left/right axis specification (ortholog); ASSOCIATED WITH visceral heterotaxy 9 (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); axoneme (ortholog) 8 66769059 66789646 + 30032202 116908205 MODEL JAAIVD010000027;XM_032911484 XP_032767375 meiosis-specific nuclear structural protein 1 protein-coding 626018344 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92650780 92650851 + 116904832 MODEL JAAIVD010000024 trna 626018345 LOC116902857 olfactory receptor 13 6 97558849 97559790 - 22301074 116902857 MODEL JAAIVD010000024;XM_032905186 XP_032761077 protein-coding 626018348 LOC116892563 zinc-alpha-2-glycoprotein-like 2 171757404 171782009 - 30032202 116892563 MODEL JAAIVD010000001;XM_032894342 XP_032750233 protein-coding 626018356 Csf3 colony stimulating factor 3 ENCODES a protein that exhibits cytokine activity (ortholog); enzyme binding (ortholog); granulocyte colony-stimulating factor receptor binding (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN extracellular space (ortholog) 9 55732650 55735170 - 22301074;30032202 116910458 MODEL JAAIVD010000002;XM_032914324;XM_032914325;XM_032914326;XM_032914327 XP_032770215;XP_032770216;XP_032770217;XP_032770218 granulocyte colony-stimulating factor protein-coding 626018369 LOC116889561 U2 spliceosomal RNA X 42630750 42630875 + 116889561 MODEL JAAIVD010000014 pseudo 626018370 Ptk6 protein tyrosine kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to retinoic acid (ortholog); intestinal epithelial cell differentiation (ortholog); ASSOCIATED WITH keratoconus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 5 158293522 158302371 - 22301074;30032202 116902432 MODEL JAAIVD010000023;XM_032904968 XP_032760859 protein-tyrosine kinase 6 protein-coding 626018382 Gpc2 glypican 2 INVOLVED IN neuron differentiation (ortholog); positive regulation of neuron projection development (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; FOUND IN endoplasmic reticulum (ortholog) 16 16025493 16031891 + 22301074;30032202 116885730 MODEL JAAIVD010000004;XM_032887040 XP_032742931 glypican-2 protein-coding 626018396 Prdm5 PR/SET domain 5 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mitotic cell cycle (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome type 1 (ortholog); brittle cornea syndrome 1 (ortholog); brittle cornea syndrome 2 (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 75660553 75819170 - 22301074 116903697 MODEL JAAIVD010000024;XM_032906371 XP_032762262 PR domain zinc finger protein 5 protein-coding 626018415 LOC116911749 transcription factor BTF3-like 10 93768797 93769276 - 116911749 MODEL JAAIVD010000005 pseudo 626018416 LOC116910703 small nucleolar RNA SNORA48 9 46509873 46510011 + 116910703 MODEL JAAIVD010000002;XR_004389230 snorna 626018419 LOC116914177 U6 spliceosomal RNA 12 41204191 41204293 - 116914177 MODEL JAAIVD010000007;XR_004389720 snrna 626018422 Prelid2 PRELI domain containing 2 15 3055798 3136262 - 30032202 116884723 MODEL JAAIVD010000010;XM_032885910 XP_032741801 PRELI domain-containing protein 2 protein-coding 626018433 Gabbr1 gamma-aminobutyric acid type B receptor subunit 1 ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); G protein-coupled GABA receptor activity (ortholog); G protein-coupled neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); negative regulation of adenylate cyclase activity (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amphetamine abuse (ortholog); FOUND IN axolemma (ortholog); cytoplasm (ortholog); dendritic shaft (ortholog) 18 10036846 10065064 + 22301074;30032202 116886854 MODEL JAAIVD010000013;XM_032888309;XM_032888310 XP_032744200;XP_032744201 protein-coding 626018464 Pim1 Pim-1 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits ATP binding (ortholog); manganese ion binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular detoxification (ortholog); cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-3 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Animal Disease Models (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 18 4368158 4373502 - 22301074;30032202 116887320 MODEL JAAIVD010000013;XM_032888913 XP_032744804 serine/threonine-protein kinase pim-1 protein-coding 626018474 LOC116883367 F-box/LRR-repeat protein 14-like 14 10978618 10980792 + 22301074;30032202 116883367 MODEL JAAIVD010000009;XM_032884479 XP_032740370 protein-coding 626018479 LOC116885180 uncharacterized LOC116885180 16 19332357 19334574 + 116885180 MODEL JAAIVD010000004;XR_004385992 ncrna 626018485 Epcip exosomal polycystin 1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mitocytosis (ortholog); FOUND IN extracellular exosome (ortholog); migrasome (ortholog) 4 53521967 53535473 + 116899002 MODEL JAAIVD010000003;XM_032900445;XM_032900446 XP_032756336;XP_032756337 C4H21orf62 chromosome 4 C21orf62 homolog;uncharacterized protein C21orf62 homolog protein-coding 626018495 Prelid3a PRELI domain containing 3A ENCODES a protein that exhibits phosphatidic acid transfer activity (ortholog); INVOLVED IN phospholipid transport (ortholog); FOUND IN mitochondrion (ortholog) 15 63811330 63825061 - 30032202 116884564 MODEL JAAIVD010000010;XM_032885706;XR_004385879;XR_004385880 XP_032741597 PRELI domain containing protein 3A protein-coding 626018511 Hdgfl2 HDGF like 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K27me3 reader activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); muscle cell differentiation (ortholog); positive regulation of cell growth (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 87471161 87490669 + 30032202 116899169 MODEL JAAIVD010000003;XM_032900734;XM_032900735;XM_032900736;XM_032900737 XP_032756625;XP_032756626;XP_032756627;XP_032756628 hepatoma-derived growth factor-related protein 2 protein-coding 626018536 LOC116894720 40S ribosomal protein S9-like 2 3985722 3993380 + 116894720 MODEL JAAIVD010000001 pseudo 626018537 LOC116898509 vomeronasal type-2 receptor 116-like 4 132576286 132597205 + 22301074;30032202 116898509 MODEL JAAIVD010000003;XM_032899740 XP_032755631 protein-coding 626018547 LOC116905391 heat shock protein HSP 90-alpha-like 7 116446723 116448989 - 116905391 MODEL JAAIVD010000026;XR_004388520 pseudo 626018550 LOC116912842 60S ribosomal protein L30-like 11 1265661 1266013 - 30032202 116912842 MODEL JAAIVD010000006;XM_032917046 XP_032772937 protein-coding 626018554 Lect2 leukocyte cell derived chemotaxin 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Carcinoma, Lewis Lung (ortholog); Experimental Neoplasms (ortholog); hepatocellular carcinoma (ortholog) 14 81521049 81527686 + 116883998 MODEL JAAIVD010000009;XM_032885231 XP_032741122 leukocyte cell-derived chemotaxin-2 protein-coding 626018562 LOC116913113 beta-defensin 43 12 61353312 61357175 - 22301074;30032202 116913113 MODEL JAAIVD010000007;XM_032917265 XP_032773156 protein-coding 626018566 LOC116894519 vomeronasal type-1 receptor 4-like 2 174933535 174934482 - 116894519 MODEL JAAIVD010000001 pseudo 626018567 LOC116895765 S-adenosylmethionine decarboxylase proenzyme-like 3 46392759 46400755 + 116895765 MODEL JAAIVD010000012 pseudo 626018568 LOC116894115 olfactory receptor 52N4-like 2 103667969 103668934 + 22301074 116894115 MODEL JAAIVD010000001;XM_032895833 XP_032751724 protein-coding 626018571 LOC116898743 uncharacterized LOC116898743 4 14811408 14832822 - 116898743 MODEL JAAIVD010000003;XR_004387659;XR_004387660 ncrna 626018578 LOC116902092 uncharacterized LOC116902092 5 130179174 130182419 - 116902092 MODEL JAAIVD010000023;XR_004388042 ncrna 626018583 LOC116883752 uncharacterized LOC116883752 14 16151550 16155961 + 116883752 MODEL JAAIVD010000009;XR_004385781 ncrna 626018587 Degs2 delta 4-desaturase, sphingolipid 2 ENCODES a protein that exhibits sphingolipid C4-monooxygenase activity (ortholog); sphingolipid delta-4 desaturase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); sphinganine metabolic process (ortholog); sphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway 7 126355937 126372792 - 22301074;30032202 116905453 MODEL JAAIVD010000026;XM_032908408;XM_032908410 XP_032764299;XP_032764301 sphingolipid delta(4)-desaturase/C4-monooxygenase DES2 protein-coding 626018597 LOC116902903 transcription factor BTF3-like 6 107709091 107709569 + 116902903 MODEL JAAIVD010000024 pseudo 626018598 LOC116903107 40S ribosomal protein S4, X isoform-like 6 5988899 5989845 + 22301074;30032202 116903107 MODEL JAAIVD010000024;XM_032905432 XP_032761323 protein-coding 626018603 LOC116902555 small nucleolar RNA SNORA48 5 62586592 62586733 - 116902555 MODEL JAAIVD010000023;XR_004388154 snorna 626018606 Lyset lysosomal enzyme trafficking factor INVOLVED IN lysosomal transport (ortholog); lysosome organization (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH DYSOSTOSIS MULTIPLEX, AIN-NAZ TYPE (ortholog); intellectual disability (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cisterna (ortholog); Golgi membrane (ortholog) 7 114017372 114019170 + 116905362 MODEL JAAIVD010000026;XM_032908286;XM_032908287 XP_032764177;XP_032764178 Tmem251 transmembrane protein 251 protein-coding 626018615 LOC116911770 macrophage-expressed gene 1 protein-like 10 88020245 88022187 - 116911770 MODEL JAAIVD010000005 pseudo 626018616 LOC116908912 olfactory receptor 1468-like 9 42155577 42156521 - 22301074;30032202 116908912 MODEL JAAIVD010000002;XM_032912366 XP_032768257 protein-coding 626018619 LOC116898397 uncharacterized LOC116898397 4 79698203 79699231 - 116898397 MODEL JAAIVD010000003 pseudo 626018620 Nxph2 neurexophilin 2 ASSOCIATED WITH ovarian cyst (ortholog) 5 109760013 109783815 + 30032202 116900998 MODEL JAAIVD010000023;XM_032902608 XP_032758499 neurexophilin-2 protein-coding 626018625 Haghl hydroxyacylglutathione hydrolase like 9 3048123 3050852 - 22301074;30032202 116908654 MODEL JAAIVD010000002;XM_032911924;XM_032911925;XM_032911926;XM_032911927 XP_032767815;XP_032767816;XP_032767817;XP_032767818 hydroxyacylglutathione hydrolase-like protein protein-coding 626018646 LOC116908278 zinc finger protein 844-like 8 115301466 115303388 + 116908278 MODEL JAAIVD010000027 pseudo 626018647 LOC116913293 ribosomal biogenesis factor-like 12 69762934 69763227 + 22301074;30032202 116913293 MODEL JAAIVD010000007;XM_032917419;XM_032917420 XP_032773310;XP_032773311 protein-coding 626018653 Erich6b glutamate rich 6B 12 48709389 48747746 - 116913165 MODEL JAAIVD010000007;XM_032917370 XP_032773261 glutamate-rich protein 6B protein-coding 626018667 LOC116893932 calcitonin gene-related peptide 2 2 86822617 86827337 - 22301074;30032202 116893932 MODEL JAAIVD010000001;XM_032895650 XP_032751541 protein-coding 626018676 LOC116896280 heat shock protein HSP 90-beta-like 3 33405588 33408061 + 116896280 MODEL JAAIVD010000012;XR_004387322 pseudo 626018679 Cidec cell death inducing DFFA like effector c ENCODES a protein that exhibits lipid transfer activity (ortholog); molecular condensate scaffold activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN apoptotic process (ortholog); execution phase of apoptosis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); familial partial lipodystrophy (ortholog); familial partial lipodystrophy type 5 (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog) 6 33103865 33115637 + 22301074;30032202 116903413 MODEL JAAIVD010000024;XM_032905931 XP_032761822 cell death activator CIDE-3 protein-coding 626018689 Traf3ip2 TRAF3 interacting protein 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN B cell affinity maturation (ortholog); B cell apoptotic process (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Candidiasis, Familial, 8 (ortholog); psoriasis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); nucleus (ortholog) 18 39418948 39462199 + 30032202 116887125 MODEL JAAIVD010000013;XM_032888672 XP_032744563 adapter protein CIKS protein-coding 626018702 Kel Kell metallo-endopeptidase (Kell blood group) ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); intracellular calcium ion homeostasis (ortholog); intracellular magnesium ion homeostasis (ortholog); ASSOCIATED WITH hemolytic disease of the fetus (ortholog); Vein of Galen Aneurysm (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 6 98914742 98931975 + 22301074;30032202 116902876 MODEL JAAIVD010000024;XM_032905207 XP_032761098 kell blood group glycoprotein protein-coding 626018723 LOC116912021 proteasome subunit beta type-3-like 11 71267393 71270307 + 116912021 MODEL JAAIVD010000006 pseudo 626018724 LOC116902668 U6 spliceosomal RNA 5 119711260 119711366 - 116902668 MODEL JAAIVD010000023;XR_004388230 snrna 626018727 LOC116895561 60S ribosomal protein L9-like 3 132656655 132657221 - 22301074;30032202 116895561 MODEL JAAIVD010000012;XM_032896796 XP_032752687 protein-coding 626018730 Cobl cordon-bleu WH2 repeat protein ENCODES a protein that exhibits actin monomer binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament network formation (ortholog); actin filament polymerization (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); axonal growth cone (ortholog) 11 81178395 81414458 - 30032202 116912710 MODEL JAAIVD010000006;XM_032916836 XP_032772727 protein cordon-bleu protein-coding 626018749 LOC116897604 small nucleolar RNA SNORA17 3 160794013 160794136 + 116897604 MODEL JAAIVD010000012 pseudo 626018750 LOC116894783 aldehyde dehydrogenase family 3 member B2 2 3665133 3674576 - 22301074;30032202 116894783 MODEL JAAIVD010000001;XM_032896434 XP_032752325 protein-coding 626018764 LOC116898183 60S ribosomal protein L6-like 4 132112878 132113711 + 116898183 MODEL JAAIVD010000003 pseudo 626018765 Scn8a sodium voltage-gated channel alpha subunit 8 ENCODES a protein that exhibits sodium ion binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential (ortholog); adult walking behavior (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Ataxia (ortholog); autistic disorder (ortholog); benign familial infantile seizures 5 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell junction (ortholog) 1 262051839 262226374 - 22301074;30032202 116883845 MODEL JAAIVD010000025;XM_032885112;XM_032885118;XM_032885127;XM_032885132;XM_032885138 XP_032741003;XP_032741009;XP_032741018;XP_032741023;XP_032741029 sodium channel protein type 8 subunit alpha protein-coding 626018803 LOC116890458 small nucleolar RNA SNORD56 1 191381162 191381215 - 116890458 MODEL JAAIVD010000025;XR_004386650 snorna 626018806 LOC116910503 mastin-like 9 2564189 2565944 + 22301074 116910503 MODEL JAAIVD010000002;XM_032914399 XP_032770290 protein-coding 626018815 LOC116895295 calcium-activated chloride channel regulator 3A-1-like 3 15972195 15994181 + 22301074;30032202 116895295 MODEL JAAIVD010000012;XM_032896607 XP_032752498 protein-coding 626018832 LOC116890486 small nucleolar RNA SNORD87 1 144704471 144704555 - 116890486 MODEL JAAIVD010000025;XR_004386673 snorna 626018835 LOC116891124 phospholipid-transporting ATPase FetA 1 3125425 3235484 - 22301074;30032202 116891124 MODEL JAAIVD010000025;XM_032891849 XP_032747740 protein-coding 626018868 LOC116887469 histone deacetylase 1-like 1 44711090 44712449 - 116887469 MODEL JAAIVD010000025 pseudo 626018869 Eri2 ERI1 exoribonuclease family member 2 ASSOCIATED WITH COVID-19 (ortholog) 2 81884551 81905285 + 22301074;30032202 116891596 MODEL JAAIVD010000001;XM_032892787;XR_004386851 XP_032748678 ERI1 exoribonuclease 2 protein-coding 626018888 Baiap2 BAR/IMD domain containing adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); dendritic shaft (ortholog) 9 64007594 64073279 - 22301074;30032202 116909785 MODEL JAAIVD010000002;XM_032913478;XM_032913479;XM_032913480;XM_032913481;XM_032913482 XP_032769369;XP_032769370;XP_032769371;XP_032769372;XP_032769373 brain-specific angiogenesis inhibitor 1-associated protein 2 protein-coding 626018917 LOC116893839 pancreatic triacylglycerol lipase 2 57436521 57449431 - 22301074;30032202 116893839 MODEL JAAIVD010000001;XM_032895557 XP_032751448 protein-coding 626018933 LOC116894943 small nucleolar RNA SNORD116 2 140056512 140056605 + 116894943 MODEL JAAIVD010000001;XR_004387140 snorna 626018936 Tram1l1 translocation associated membrane protein 1 like 1 3 35496460 35498729 - 22301074;30032202 116896286 MODEL JAAIVD010000012;XM_032897368 XP_032753259 translocating chain-associated membrane protein 1-like 1 protein-coding 626018941 Ncoa4 nuclear receptor coactivator 4 INVOLVED IN intracellular iron ion homeostasis (ortholog); protein targeting to lysosome (ortholog); response to hormone (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH invasive ductal carcinoma (ortholog); ovarian carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN autolysosome (ortholog) 13 7845633 7865914 + 30032202 116914407 MODEL JAAIVD010000008;XM_032918646;XM_032918647;XM_032918648 XP_032774537;XP_032774538;XP_032774539 protein-coding 626018963 LOC116894716 vomeronasal type-1 receptor 1-like 2 174672463 174673416 - 22301074;30032202 116894716 MODEL JAAIVD010000001;XM_032896414 XP_032752305 protein-coding 626018966 LOC116900815 zinc finger protein 532-like 5 35788693 35792249 - 116900815 MODEL JAAIVD010000023 pseudo 626018967 St6galnac4 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 4 5 3043653 3056138 - 22301074;30032202 116901141 MODEL JAAIVD010000023;XM_032902748;XM_032902749;XM_032902750 XP_032758639;XP_032758640;XP_032758641 alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase protein-coding 626018983 LOC116909653 hemoglobin subunit alpha-1/2 9 3596386 3597242 - 22301074;30032202 116909653 MODEL JAAIVD010000002;XM_032913305 XP_032769196 protein-coding 626018990 LOC116907078 60S ribosomal protein L27-like 8 68288885 68289356 + 22301074;30032202 116907078 MODEL JAAIVD010000027;XM_032910032 XP_032765923 protein-coding 626018995 Cdca7 cell division cycle associated 7 ENCODES a protein that exhibits hemi-methylated DNA-binding (ortholog); INVOLVED IN regulation of cell population proliferation (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); immunodeficiency-centromeric instability-facial anomalies syndrome 3 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 49789313 49799867 + 30032202 116901513 MODEL JAAIVD010000023;XM_032903487 XP_032759378 cell division cycle-associated protein 7 protein-coding 626019008 Mmp17 matrix metallopeptidase 17 INVOLVED IN drinking behavior (ortholog); kidney development (ortholog) 16 24366260 24390139 - 22301074;30032202 116885628 MODEL JAAIVD010000004;XM_032886930;XM_032886931 XP_032742821;XP_032742822 matrix metalloproteinase-17 protein-coding 626019025 LOC116912414 formin-like protein 8 11 94049306 94051659 - 116912414 MODEL JAAIVD010000006;XM_032916478;XM_032916479 XP_032772369;XP_032772370 protein-coding 626019034 LOC116883980 high mobility group protein HMG-I/HMG-Y-like 14 28057781 28058128 + 116883980 MODEL JAAIVD010000009 pseudo 626019035 Rchy1 ring finger and CHY zinc finger domain containing 1 ENCODES a protein that exhibits p53 binding (ortholog); protein homodimerization activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of protein ubiquitination (ortholog); protein autoubiquitination (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Disease Progression (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 11 4775591 4791167 - 22301074;30032202 116912133 MODEL JAAIVD010000006;XM_032916043;XM_032916044 XP_032771934;XP_032771935 RING finger and CHY zinc finger domain-containing protein 1 protein-coding 626019053 Jtb jumping translocation breakpoint ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitotic cell cycle (ortholog); mitotic cytokinesis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); midbody (ortholog) 3 63405367 63410774 - 22301074;30032202 116896617 MODEL JAAIVD010000012;XM_032897878 XP_032753769 protein JTB protein-coding 626019062 Upk1a uroplakin 1A INVOLVED IN epithelial cell differentiation (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog); cell surface (ortholog) 2 165392964 165403742 + 22301074;30032202 116894457 MODEL JAAIVD010000001;XM_032896166 XP_032752057 uroplakin-1a protein-coding 626019073 LOC116913213 mast cell protease 2-like 12 69000605 69003069 - 22301074;30032202 116913213 MODEL JAAIVD010000007;XM_032917392 XP_032773283 protein-coding 626019081 LOC116889837 putative olfactory receptor 2W6 116889837 MODEL JAAIVD010001756 pseudo 626019082 LOC116894830 U6 spliceosomal RNA 2 46650459 46650565 + 116894830 MODEL JAAIVD010000001;XR_004387045 snrna 626019085 Tdrd3 tudor domain containing 3 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3 reader activity (ortholog); histone H4 reader activity (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytosol (ortholog); DNA topoisomerase III-beta-TDRD3 complex (ortholog); exon-exon junction complex (ortholog) 12 37070424 37191143 - 22301074;30032202 116913989 MODEL JAAIVD010000007;XM_032918264 XP_032774155 tudor domain-containing protein 3 protein-coding 626019103 LOC116913022 U2 spliceosomal RNA 11 52104287 52104430 + 116913022 MODEL JAAIVD010000006 pseudo 626019104 Pglyrp3 peptidoglycan recognition protein 3 ENCODES a protein that exhibits peptidoglycan binding (ortholog); peptidoglycan immune receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); biological process involved in interaction with host (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN protein-containing complex (ortholog) 3 505845 515602 + 22301074 116896111 MODEL JAAIVD010000012;XM_032897074 XP_032752965 protein-coding 626019114 LOC116905557 60S ribosomal protein L18a-like 7 45331687 45333207 - 116905557 MODEL JAAIVD010000026 pseudo 626019115 Dpagt1 dolichyl-phosphate N-acetylglucosaminephosphotransferase 1 ENCODES a protein that exhibits UDP-N-acetylglucosamine-dolichyl-phosphate N-acetylglucosaminephosphotransferase activity (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ij (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 8 38884171 38890818 + 22301074;30032202 116907230 MODEL JAAIVD010000027;XM_032910195 XP_032766086 UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase protein-coding 626019128 Tpst1 tyrosylprotein sulfotransferase 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN post-translational protein modification (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); colorectal adenocarcinoma (ortholog); COVID-19 (ortholog); FOUND IN Golgi lumen (ortholog); Golgi membrane (ortholog); trans-Golgi network (ortholog) 16 23850190 23910359 - 30032202 116885411 MODEL JAAIVD010000004;XM_032886697;XM_032886698 XP_032742588;XP_032742589 protein-tyrosine sulfotransferase 1 protein-coding 626019141 Adamts14 ADAM metallopeptidase with thrombospondin type 1 motif 14 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN collagen fibril organization (ortholog); ASSOCIATED WITH Fraser syndrome 3 (ortholog); osteoarthritis (ortholog); primary progressive multiple sclerosis (ortholog); FOUND IN extracellular region (ortholog) 18 27031016 27107170 - 22301074;30032202 116887120 MODEL JAAIVD010000013;XM_032888667;XM_032888668 XP_032744558;XP_032744559 A disintegrin and metalloproteinase with thrombospondin motifs 14 protein-coding 626019168 LOC116894833 U6 spliceosomal RNA 2 196454499 196454605 - 116894833 MODEL JAAIVD010000001;XR_004387048 snrna 626019171 LOC116896663 putative glutathione-specific gamma-glutamylcyclotransferase 2 1 83895538 83901071 + 116896663 MODEL JAAIVD010000025 pseudo 626019172 LOC116889473 small nucleolar RNA SNORA31 X 69581360 69581489 + 116889473 MODEL JAAIVD010000014;XR_004386425 snorna 626019175 LOC116906082 U6 snRNA-associated Sm-like protein LSm2 7 65145111 65147490 - 116906082 MODEL JAAIVD010000026 pseudo 626019176 LOC116891856 uncharacterized LOC116891856 2 111050865 111056132 + 116891856 MODEL JAAIVD010000001;XR_004386867 ncrna 626019180 Med18 mediator complex subunit 18 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 1 25777880 25783254 + 22301074;30032202 116895485 MODEL JAAIVD010000025;XM_032896748 XP_032752639 mediator of RNA polymerase II transcription subunit 18 protein-coding 626019187 LOC116911001 uncharacterized LOC116911001 10 72017900 72028082 - 116911001 MODEL JAAIVD010000005;XR_004389294 ncrna 626019192 Ccdc42 coiled-coil domain containing 42 INVOLVED IN acrosome assembly (ortholog); centrosome cycle (ortholog); cilium assembly (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) 9 48186987 48197175 + 30032202 116909620 MODEL JAAIVD010000002;XM_032913247 XP_032769138 coiled-coil domain-containing protein 42 protein-coding 626019203 LOC116906462 small nucleolar RNA SNORA17 7 58702971 58703099 + 116906462 MODEL JAAIVD010000026;XR_004388717 snorna 626019206 LOC116883241 eukaryotic translation initiation factor 1-like 14 62200390 62201720 - 116883241 MODEL JAAIVD010000009 pseudo 626019207 LOC116899459 gamma-crystallin A 4 138986159 138989057 - 30032202 116899459 MODEL JAAIVD010000003;XM_032901244 XP_032757135 protein-coding 626019213 Slitrk2 SLIT and NTRK like family member 2 INVOLVED IN axonogenesis (ortholog); positive regulation of synapse assembly (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH intellectual disability (ortholog); non-syndromic X-linked intellectual developmental disorder 111 (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) X 125358437 125366203 - 22301074;30032202 116888846 MODEL JAAIVD010000014;XM_032890115 XP_032746006 SLIT and NTRK-like protein 2 protein-coding 626019219 Misfa mitochondrial sheath formation associated INVOLVED IN sperm mitochondrial sheath assembly (ortholog); spermatogenesis (ortholog); FOUND IN mitochondrial outer membrane (ortholog) 2 152381590 152389863 - 116892091 MODEL JAAIVD010000001;XM_032893566 XP_032749457 Spty2d1os SPTY2D1 opposite strand;putative transmembrane protein SPTY2D1OS protein-coding 626019225 LOC116911743 contactin-associated protein like 5-3 10 92630572 93451539 - 22301074 116911743 MODEL JAAIVD010000005;XM_032915729 XP_032771620 protein-coding 626019253 Riiad1 regulatory subunit of type II PKA R-subunit domain containing 1 3 62704517 62712218 + 116896586 MODEL JAAIVD010000012;XM_032897826 XP_032753717 RIIa domain-containing protein 1 protein-coding 626019261 Nherf4 NHERF family PDZ scaffold protein 4 ENCODES a protein that exhibits guanylate cyclase inhibitor activity (ortholog); ubiquitin-specific protease binding (ortholog); INVOLVED IN negative regulation of cGMP-mediated signaling (ortholog); FOUND IN apical junction complex (ortholog); apical part of cell (ortholog); brush border (ortholog) 8 38803915 38808629 - 30032202 116908156 MODEL JAAIVD010000027;XM_032911457 XP_032767348 Pdzd3 Na(+)/H(+) exchange regulatory cofactor NHE-RF4;PDZ domain containing 3 protein-coding 626019275 Gpr156 G protein-coupled receptor 156 INVOLVED IN stereocilium bundle organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 121 (ortholog); Hearing Loss (ortholog); FOUND IN plasma membrane (ortholog) 4 22880698 22973696 + 22301074;30032202 116898837 MODEL JAAIVD010000003;XM_032900190 XP_032756081 probable G-protein coupled receptor 156 protein-coding 626019289 Ehd3 EH domain containing 3 INVOLVED IN cilium assembly (ortholog); early endosome to Golgi transport (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); FOUND IN ciliary pocket membrane (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) 7 19411935 19437055 - 22301074;30032202 116905943 MODEL JAAIVD010000026;XM_032908937 XP_032764828 EH domain-containing protein 3 protein-coding 626019299 Grm8 glutamate metabotropic receptor 8 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); glutamate receptor activity (ortholog); group III metabotropic glutamate receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled glutamate receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); anxiety disorder (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 6 111373184 112178616 + 22301074;30032202 116904029 MODEL JAAIVD010000024;XM_032906859 XP_032762750 metabotropic glutamate receptor 8 protein-coding 626019313 Zbtb40 zinc finger and BTB domain containing 40 INVOLVED IN DNA damage response (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN nucleus (ortholog) 1 21186942 21253815 + 22301074;30032202 116894183 MODEL JAAIVD010000025;XM_032895902 XP_032751793 zinc finger and BTB domain-containing protein 40 protein-coding 626019337 LOC116910414 uncharacterized LOC116910414 9 73505559 73565461 + 116910414 MODEL JAAIVD010000002;XR_004389149 ncrna 626019342 LOC116887564 high mobility group protein B2-like 18 29337824 29338485 - 116887564 MODEL JAAIVD010000013 pseudo 626019343 LOC116912495 vomeronasal type-2 receptor 116-like 11 18798767 18819437 - 22301074;30032202 116912495 MODEL JAAIVD010000006;XM_032916580 XP_032772471 protein-coding 626019353 LOC116896518 histone H4 3 61019099 61019540 + 22301074;30032202 116896518 MODEL JAAIVD010000012;XM_032897700 XP_032753591 protein-coding 626019358 Carmil1 capping protein regulator and myosin 1 linker 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); barbed-end actin filament uncapping (ortholog); cell migration (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN cell leading edge (ortholog); cytosol (ortholog); filamentous actin (ortholog) 14 43024816 43304556 - 22301074;30032202 116883164 MODEL JAAIVD010000009;XM_032884193;XM_032884194;XM_032884195;XM_032884196;XM_032884197;XM_032884198;XM_032884199;XM_032884200;XM_032884201;XM_032884202;XM_032884203 XP_032740084;XP_032740085;XP_032740086;XP_032740087;XP_032740088;XP_032740089;XP_032740090;XP_032740091;XP_032740092;XP_032740093;XP_032740094 F-actin-uncapping protein LRRC16A protein-coding 626019423 LOC116909325 olfactory receptor 1361-like 9 38238534 38239475 - 22301074;30032202 116909325 MODEL JAAIVD010000002;XM_032912866 XP_032768757 protein-coding 626019426 LOC116912933 U7 small nuclear RNA 11 97614286 97614347 + 116912933 MODEL JAAIVD010000006;XR_004389503 snrna 626019429 LOC116886083 cytochrome c oxidase subunit 6C-1 17 43746188 43746409 - 116886083 MODEL JAAIVD010000011;XM_032887403 XP_032743294 protein-coding 626019433 LOC116907141 nucleophosmin-like 8 52546918 52549864 + 116907141 MODEL JAAIVD010000027 pseudo 626019434 Vash2 vasohibin 2 ENCODES a protein that exhibits actin binding (ortholog); metallocarboxypeptidase activity (ortholog); microtubule binding (ortholog); INVOLVED IN axon development (ortholog); cell-cell fusion (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 10 69038461 69070344 - 22301074;30032202 116910882 MODEL JAAIVD010000005;XM_032914656 XP_032770547 tubulinyl-Tyr carboxypeptidase 2 protein-coding 626019446 Cldn16 claudin 16 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN paracellular transport (ortholog); positive regulation of calcium ion transport (ortholog); renal absorption (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hypercalciuria (ortholog); hypertension (ortholog); FOUND IN bicellular tight junction (ortholog); tight junction (ortholog) 4 13716740 13727003 - 22301074;30032202 116897860 MODEL JAAIVD010000003;XM_032899267 XP_032755158 claudin-16 protein-coding 626019453 Lrrc69 leucine rich repeat containing 69 1 128999503 129128007 + 22301074 116903241 MODEL JAAIVD010000025;XM_032905623;XM_032905631 XP_032761514;XP_032761522 leucine-rich repeat-containing protein 69 protein-coding 626019469 LOC116896254 zinc finger protein 58-like 3 28460686 28504581 + 22301074 116896254 MODEL JAAIVD010000012;XM_032897326;XM_032897327;XM_032897328;XM_032897330 XP_032753217;XP_032753218;XP_032753219;XP_032753221 protein-coding 626019491 LOC116887857 rho GTPase-activating protein 7-like X 44576193 44582664 + 116887857 MODEL JAAIVD010000014 pseudo 626019492 C10H1orf74 chromosome 10 C1orf74 homolog 10 71155803 71158259 + 116911425 MODEL JAAIVD010000005;XM_032915390 XP_032771281 UPF0739 protein C1orf74 homolog protein-coding 626019498 LOC116900252 olfactory receptor 1013-like 5 63087835 63088744 + 22301074;30032202 116900252 MODEL JAAIVD010000023;XM_032902004 XP_032757895 protein-coding 626019501 LOC116893707 olfactory receptor 5B3-like 2 13334859 13335791 - 22301074;30032202 116893707 MODEL JAAIVD010000001;XM_032895424 XP_032751315 protein-coding 626019504 LOC116883801 dnaJ homolog subfamily A member 1-like 14 41254544 41255739 - 116883801 MODEL JAAIVD010000009 pseudo 626019505 LOC116910776 U6 spliceosomal RNA 9 62481520 62481613 - 116910776 MODEL JAAIVD010000002 pseudo 626019506 Tmprss12 transmembrane serine protease 12 INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); positive regulation of sperm capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog) 1 262766779 262779023 - 22301074;30032202 116890218 MODEL JAAIVD010000025;XM_032890955 XP_032746846 transmembrane protease serine 12 protein-coding 626019514 Kctd9 potassium channel tetramerization domain containing 9 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell maturation (ortholog); gene expression (ortholog); natural killer cell degranulation (ortholog) 12 56735920 56763665 - 22301074 116913958 MODEL JAAIVD010000007;XM_032918224;XM_032918225;XM_032918226;XM_032918227 XP_032774115;XP_032774116;XP_032774117;XP_032774118 BTB/POZ domain-containing protein KCTD9 protein-coding 626019540 LOC116897106 cadherin-12 3 160655311 160779074 - 22301074;30032202 116897106 MODEL JAAIVD010000012;XM_032898748 XP_032754639 protein-coding 626019552 LOC116894878 U6 spliceosomal RNA 2 195687968 195688065 - 116894878 MODEL JAAIVD010000001 pseudo 626019553 LOC116888135 actin, cytoplasmic 1-like X 106168493 106169186 + 116888135 MODEL JAAIVD010000014 pseudo 626019554 LOC116893486 vomeronasal type-1 receptor 4-like 2 181590420 181591387 + 22301074;30032202 116893486 MODEL JAAIVD010000001;XM_032895235 XP_032751126 protein-coding 626019558 LOC116890380 U6 spliceosomal RNA 1 117125055 117125173 - 116890380 MODEL JAAIVD010000025 pseudo 626019559 LOC116887784 small nucleolar RNA SNORA28 18 29563360 29563485 - 116887784 MODEL JAAIVD010000013;XR_004386281 snorna 626019562 Tmem243 transmembrane protein 243 6 140936823 140954602 + 116904148 MODEL JAAIVD010000024;XM_032907045 XP_032762936 protein-coding 626019571 LOC116909280 olfactory receptor 1361-like 9 38582472 38583413 + 22301074;30032202 116909280 MODEL JAAIVD010000002;XM_032912815 XP_032768706 protein-coding 626019574 Kiaa1217 KIAA1217 ortholog INVOLVED IN embryonic skeletal system development (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 14 3298869 3591148 - 30032202 116883937 MODEL JAAIVD010000009;XM_032885184;XM_032885185;XM_032885186;XM_032885187 XP_032741075;XP_032741076;XP_032741077;XP_032741078 sickle tail protein homolog protein-coding 626019602 LOC116895394 uncharacterized LOC116895394 3 59618730 59623117 - 116895394 MODEL JAAIVD010000012;XR_004387272 ncrna 626019607 Tnnc1 troponin C1, slow skeletal and cardiac type ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle contraction (ortholog); diaphragm contraction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 1S (ortholog); FOUND IN cardiac Troponin complex (ortholog); contractile muscle fiber (ortholog); troponin complex (ortholog) 13 6909102 6912496 + 22301074;30032202 116915020 MODEL JAAIVD010000008;XM_032919429 XP_032775320 troponin C, slow skeletal and cardiac muscles protein-coding 626019617 Cenpt centromere protein T INVOLVED IN chromosome organization (ortholog); chromosome segregation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH Short Stature and Microcephaly with Genital Anomalies (ortholog); FOUND IN chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) 17 25581080 25587580 - 22301074;30032202 116886506 MODEL JAAIVD010000011;XM_032888014 XP_032743905 protein-coding 626019634 LOC116894331 mas-related G-protein coupled receptor member X2-like 2 151988169 151989113 + 22301074;30032202 116894331 MODEL JAAIVD010000001;XM_032896025 XP_032751916 protein-coding 626019637 Vwc2l von Willebrand factor C domain containing 2 like INVOLVED IN negative regulation of BMP signaling pathway (ortholog); positive regulation of neuron differentiation (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); extracellular space (ortholog) 4 144092110 144262126 + 22301074;30032202 116899474 MODEL JAAIVD010000003;XM_032901297;XM_032901298;XM_032901299 XP_032757188;XP_032757189;XP_032757190 von Willebrand factor C domain-containing protein 2-like protein-coding 626019651 LOC116885038 small nucleolar RNA SNORA48 15 56138436 56138574 - 116885038 MODEL JAAIVD010000010;XR_004385925 snorna 626019654 Chmp2a charged multivesicular body protein 2A ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); establishment of protein localization (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); chromatin (ortholog) 2 174151624 174154507 + 30032202 116892630 MODEL JAAIVD010000001;XM_032894449;XM_032894450;XM_032894451 XP_032750340;XP_032750341;XP_032750342 protein-coding 626019673 Id3 inhibitor of DNA binding 3, HLH protein ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); leptomycin B binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); central nervous system development (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 22091879 22093472 - 22301074;30032202 116894433 MODEL JAAIVD010000025;XM_032896139 XP_032752030 DNA-binding protein inhibitor ID-3 protein-coding 626019680 LOC116885643 protein ZBED8-like 16 24117968 24122168 - 22301074 116885643 MODEL JAAIVD010000004;XM_032886952 XP_032742843 protein-coding 626019687 LOC116887750 U2 spliceosomal RNA 18 4441328 4441431 + 116887750 MODEL JAAIVD010000013 pseudo 626019688 LOC116887599 alpha/beta hydrolase domain-containing protein 17C-like 18 9327791 9338009 - 116887599 MODEL JAAIVD010000013 pseudo 626019689 LOC116903042 putative vomeronasal receptor-like protein 4 6 159458368 159459285 - 22301074;30032202 116903042 MODEL JAAIVD010000024;XM_032905344 XP_032761235 protein-coding 626019692 Ndufb3 NADH:ubiquinone oxidoreductase subunit B3 ASSOCIATED WITH Alzheimer's disease (ortholog); cataract (ortholog); epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 4 133799184 133805276 - 22301074;30032202 116899424 MODEL JAAIVD010000003;XM_032901167 XP_032757058 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3 protein-coding 626019699 Nup58 nucleoporin 58 ENCODES a protein that exhibits identical protein binding (ortholog); nuclear localization sequence binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN nucleocytoplasmic transport (ortholog); regulation of protein import into nucleus (ortholog); PARTICIPATES IN mRNA nuclear export pathway; FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog); protein-containing complex (ortholog) 12 64163186 64211742 + 30032202 116914049 MODEL JAAIVD010000007;XM_032918331;XM_032918332 XP_032774222;XP_032774223 nucleoporin p58/p45 protein-coding 626019722 Entpd1 ectonucleoside triphosphate diphosphohydrolase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); ATP hydrolysis activity (ortholog); identical protein binding (ortholog); INVOLVED IN ADP catabolic process (ortholog); AMP catabolic process (ortholog); cellular response to aluminum ion (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN basement membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 2 39778529 39857350 + 30032202;38545102 116891152 MODEL JAAIVD010000001;XM_032891940;XM_032891941;XM_032891942 XP_032747831;XP_032747832;XP_032747833 protein-coding 626019744 Phtf2 putative homeodomain transcription factor 2 FOUND IN endoplasmic reticulum (ortholog) 6 150059556 150175344 - 30032202 116904165 MODEL JAAIVD010000024;XM_032907063;XM_032907064;XM_032907065;XM_032907066 XP_032762954;XP_032762955;XP_032762956;XP_032762957 protein-coding 626019772 LOC116889966 olfactory receptor 6C6-like 1 162021293 162022247 - 116889966 MODEL JAAIVD010000025 pseudo 626019773 Cst11 cystatin 11 INVOLVED IN defense response to Gram-negative bacterium (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 5 128298073 128300741 - 22301074;30032202 116900669 MODEL JAAIVD010000023;XM_032902373 XP_032758264 cystatin-11 protein-coding 626019780 LOC116893708 olfactory receptor 5B3-like 2 13350887 13351813 - 22301074;30032202 116893708 MODEL JAAIVD010000001;XM_032895425 XP_032751316 protein-coding 626019784 Tti1 TELO2 interacting protein 1 INVOLVED IN positive regulation of DNA damage checkpoint (ortholog); regulation of TOR signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY AND MOVEMENT ABNORMALITIES (ortholog); FOUND IN cytoplasm (ortholog); TORC1 complex (ortholog); TORC2 complex (ortholog) 5 137323626 137371771 - 30032202 116902233 MODEL JAAIVD010000023;XM_032904640;XM_032904641 XP_032760531;XP_032760532 TELO2-interacting protein 1 homolog protein-coding 626019801 Dock3 dedicator of cytokinesis 3 ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 98208528 98550336 - 22301074;30032202 116907508 MODEL JAAIVD010000027;XM_032910506 XP_032766397 dedicator of cytokinesis protein 3 protein-coding 626019858 Prps1l1 phosphoribosyl pyrophosphate synthetase 1 like 1 INVOLVED IN male gonad development (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway 7 48274636 48276315 + 22301074;30032202 116905670 MODEL JAAIVD010000026;XM_032908653 XP_032764544 ribose-phosphate pyrophosphokinase 3 protein-coding 626019863 Aste1 asteroid structure-specific endonuclease 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); single-stranded DNA endodeoxyribonuclease activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); mismatch repair cancer syndrome (ortholog) 8 96689515 96706657 + 22301074 116907451 MODEL JAAIVD010000027;XM_032910427;XM_032910428;XM_032910430;XM_032910431;XM_032910432;XM_032910433;XM_032910434;XM_032910435;XM_032910436 XP_032766318;XP_032766319;XP_032766321;XP_032766322;XP_032766323;XP_032766324;XP_032766325;XP_032766326;XP_032766327 asteroid homolog 1;protein asteroid homolog 1 protein-coding 626019903 LOC116910586 uncharacterized LOC116910586 9 69342942 69349706 + 116910586 MODEL JAAIVD010000002;XM_032914508 XP_032770399 uncharacterized protein LOC116910586 protein-coding 626019910 LOC116906150 glyceraldehyde-3-phosphate dehydrogenase-like 7 95207092 95210971 + 116906150 MODEL JAAIVD010000026 pseudo 626019911 LOC116893688 olfactory receptor 1444 2 12888346 12889305 + 22301074;30032202 116893688 MODEL JAAIVD010000001;XM_032895405 XP_032751296 protein-coding 626019914 LOC116884730 protocadherin gamma-B7-like 15 7170224 7173948 - 22301074 116884730 MODEL JAAIVD010000010;XM_032885945 XP_032741836 protein-coding 626019919 LOC116896070 60S acidic ribosomal protein P0-like 3 210269716 210290206 + 116896070 MODEL JAAIVD010000012 pseudo 626019920 LOC116908360 small nucleolar RNA SNORA8 8 61265292 61265411 - 116908360 MODEL JAAIVD010000027;XR_004388910 snorna 626019923 LOC116890566 small nucleolar RNA SNORA17 1 144177971 144178099 - 116890566 MODEL JAAIVD010000025;XR_004386736 snorna 626019926 Rab10 RAB10, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GDP-dissociation inhibitor binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); axonogenesis (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Liver Reperfusion Injury (ortholog); FOUND IN cilium (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network (ortholog) 7 23956895 24012032 - 22301074;30032202 116906014 MODEL JAAIVD010000026;XM_032909055 XP_032764946 ras-related protein Rab-10 protein-coding 626019936 LOC116898213 phosphoglycerate kinase 1-like 4 143784944 143786076 - 116898213 MODEL JAAIVD010000003 pseudo 626019937 Hsf5 heat shock transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription repressor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog); XY body (ortholog) 9 83139670 83182584 - 22301074 116908491 MODEL JAAIVD010000002;XM_032911649 XP_032767540 heat shock factor protein 5 protein-coding 626019946 Ptpn3 protein tyrosine phosphatase non-receptor type 3 ENCODES a protein that exhibits ATPase binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN liver regeneration (ortholog); negative regulation of membrane protein ectodomain proteolysis (ortholog); negative regulation of mitotic cell cycle (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 1 94303104 94417599 + 22301074;30032202 116901650 MODEL JAAIVD010000025;XM_032903760;XM_032903769;XM_032903777 XP_032759651;XP_032759660;XP_032759668 tyrosine-protein phosphatase non-receptor type 3 protein-coding 626019982 Il15 interleukin 15 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell maturation (ortholog); cellular response to vitamin D (ortholog); extrathymic T cell selection (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); arteriosclerosis (ortholog); aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 17773661 17839657 - 22301074;30032202 116886229 MODEL JAAIVD010000011;XM_032887621;XM_032887622;XM_032887623;XM_032887624;XM_032887625;XM_032887626;XM_032887627;XM_032887628;XM_032887629;XM_032887631;XM_032887632;XM_032887633;XM_032887634;XM_032887635;XM_032887636;XR_004386096 XP_032743512;XP_032743513;XP_032743514;XP_032743515;XP_032743516;XP_032743517;XP_032743518;XP_032743519;XP_032743520;XP_032743522;XP_032743523;XP_032743524;XP_032743525;XP_032743526;XP_032743527 interleukin-15 protein-coding 626020031 LOC116901696 olfactory receptor 50-like 5 82009192 82010130 + 22301074;30032202 116901696 MODEL JAAIVD010000023;XM_032903825 XP_032759716 protein-coding 626020034 LOC116913053 U6 spliceosomal RNA 11 39303510 39303616 + 116913053 MODEL JAAIVD010000006;XR_004389587 snrna 626020037 LOC116909522 keratin-associated protein 4-7-like 9 54564506 54565135 + 22301074;30032202 116909522 MODEL JAAIVD010000002;XM_032913130 XP_032769021 protein-coding 626020041 Eml4 EMAP like 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 9475465 9590694 - 30032202 116905794 MODEL JAAIVD010000026;XM_032908770;XM_032908771 XP_032764661;XP_032764662 echinoderm microtubule-associated protein-like 4 protein-coding 626020072 Mrpl50 mitochondrial ribosomal protein L50 FOUND IN cytosol (ortholog); mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 7 57369291 57373983 + 22301074;30032202 116905002 MODEL JAAIVD010000026;XM_032907687 XP_032763578 39S ribosomal protein L50, mitochondrial protein-coding 626020078 LOC116907429 olfactory receptor 150-like 8 82367188 82368132 + 22301074;30032202 116907429 MODEL JAAIVD010000027;XM_032910397 XP_032766288 protein-coding 626020081 LOC116893062 selenide, water dikinase 1-like 2 35236604 35237408 + 116893062 MODEL JAAIVD010000001 pseudo 626020082 Pgf placental growth factor ENCODES a protein that exhibits growth factor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amyotrophic lateral sclerosis (ortholog); ankylosing spondylitis (ortholog); FOUND IN extracellular space (ortholog) 7 99276864 99287624 - 22301074;30032202 116905814 MODEL JAAIVD010000026;XM_032908784 XP_032764675 placenta growth factor protein-coding 626020093 LOC116889870 40S ribosomal protein S19-like 1 155218186 155218568 - 116889870 MODEL JAAIVD010000025 pseudo 626020094 Cfap298 cilia and flagella associated protein 298 INVOLVED IN cilium assembly (ortholog); regulation of cilium movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 26 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 4 53650554 53659811 + 22301074;30032202 116899005 MODEL JAAIVD010000003;XM_032900450;XM_032900451 XP_032756341;XP_032756342 cilia- and flagella-associated protein 298 protein-coding 626020111 LOC116896037 60S ribosomal protein L10a-like 3 191279659 191280357 - 116896037 MODEL JAAIVD010000012 pseudo 626020112 LOC116889834 actin-like 30032202 116889834 MODEL JAAIVD010001610;XM_032890669 XP_032746560 protein-coding 626020113 Ogdhl oxoglutarate dehydrogenase L INVOLVED IN 2-oxoglutarate metabolic process (ortholog); tricarboxylic acid cycle (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); depressive disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 13 8036869 8064865 + 22301074;30032202 116914689 MODEL JAAIVD010000008;XM_032919109 XP_032775000 2-oxoglutarate dehydrogenase-like, mitochondrial;oxoglutarate dehydrogenase like protein-coding 626020141 LOC116907241 V-type proton ATPase subunit G 1-like 8 11202978 11240815 - 116907241 MODEL JAAIVD010000027 pseudo 626020142 LOC116903663 regenerating islet-derived protein 3-beta 6 67951180 67954475 - 30032202 116903663 MODEL JAAIVD010000024;XM_032906319 XP_032762210 protein-coding 626020152 LOC116905324 uncharacterized LOC116905324 7 101492131 101502434 + 116905324 MODEL JAAIVD010000026;XR_004388517 ncrna 626020157 Htr1d 5-hydroxytryptamine receptor 1D ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); intestine smooth muscle contraction (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hypotension (ortholog); obsessive-compulsive disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog); plasma membrane (ortholog) 1 21788620 21790231 - 22301074;30032202 116886661 MODEL JAAIVD010000025;XM_032888156 XP_032744047 protein-coding 626020162 Rufy1 RUN and FYVE domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); SH2 domain binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); protein transport (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome membrane (ortholog) 9 33047658 33090145 - 22301074;30032202 116909032 MODEL JAAIVD010000002;XM_032912511 XP_032768402 RUN and FYVE domain-containing protein 1 protein-coding 626020184 Chmp3 charged multivesicular body protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasmic vesicle (ortholog) 6 74567087 74615545 + 30032202 116903686 MODEL JAAIVD010000024;XM_032906350;XM_032906351 XP_032762241;XP_032762242 protein-coding 626020197 Ice2 interactor of little elongation complex ELL subunit 2 INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); snRNA transcription by RNA polymerase II (ortholog); snRNA transcription by RNA polymerase III (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Paranoid Disorders (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); euchromatin (ortholog) 8 63736452 63777426 + 22301074;30032202 116906816 MODEL JAAIVD010000027;XM_032909695;XM_032909696;XM_032909697;XR_004388771 XP_032765586;XP_032765587;XP_032765588 little elongation complex subunit 2 protein-coding 626020224 Gc GC vitamin D binding protein ENCODES a protein that exhibits actin binding (ortholog); calcidiol binding (ortholog); vitamin D binding (ortholog); INVOLVED IN female pregnancy (ortholog); lactation (ortholog); response to estradiol (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); AIDS Dementia Complex (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 11 2886271 2919624 - 22301074;30032202 116912136 MODEL JAAIVD010000006;XM_032916050 XP_032771941 vitamin D-binding protein protein-coding 626020241 LOC116898116 spermatogenesis-associated protein 31A6-like 4 103840994 103846553 - 116898116 MODEL JAAIVD010000003;XM_032899497 XP_032755388 protein-coding 626020246 LOC116904548 killer cell lectin-like receptor 4 6 17417608 17453892 - 116904548 MODEL JAAIVD010000024;XM_032907345;XM_032907346 XP_032763236;XP_032763237 protein-coding 626020261 Tmem134 transmembrane protein 134 FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 2 3510987 3516458 - 116890790 MODEL JAAIVD010000001;XM_032891264 XP_032747155 protein-coding 626020272 LOC116894077 olfactory receptor 52D1-like 2 103083383 103085164 - 22301074 116894077 MODEL JAAIVD010000001;XM_032895800 XP_032751691 protein-coding 626020276 LOC116895849 serine/Arginine-related protein 53-like 3 87872330 87886517 - 30032202 116895849 MODEL JAAIVD010000012;XM_032896958 XP_032752849 protein-coding 626020283 Stil STIL centriolar assembly protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centrosome duplication (ortholog); determination of left/right symmetry (ortholog); embryonic axis specification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 41538178 41584869 - 30032202 116898799 MODEL JAAIVD010000025;XM_032900153 XP_032756044 SCL-interrupting locus protein protein-coding 626020304 LOC116892802 zinc finger protein 54-like 2 186235026 186248722 - 22301074 116892802 MODEL JAAIVD010000001;XM_032894675 XP_032750566 protein-coding 626020311 LOC116895717 RNA-binding protein EWS-like 3 220759938 220762108 + 116895717 MODEL JAAIVD010000012 pseudo 626020312 LOC116890339 U6 spliceosomal RNA 1 254514533 254514639 - 116890339 MODEL JAAIVD010000025;XR_004386561 snrna 626020315 Hap1 huntingtin associated protein 1 ENCODES a protein that exhibits brain-derived neurotrophic factor binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); cellular response to growth factor stimulus (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Dehydration (ortholog); melancholic depression (ortholog); nutrition disease (ortholog); FOUND IN autophagosome (ortholog); axon terminus (ortholog); centriole (ortholog) 9 59651218 59659558 - 30032202 116909603 MODEL JAAIVD010000002;XM_032913225;XR_004389085 XP_032769116 huntingtin-associated protein 1 protein-coding 626020334 Vstm2a V-set and transmembrane domain containing 2A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to BMP stimulus (ortholog); positive regulation of brown fat cell differentiation (ortholog); positive regulation of gene expression (ortholog); FOUND IN extracellular region (ortholog); nucleus (ortholog) 11 84734071 84761676 + 116912167 MODEL JAAIVD010000006;XM_032916087;XM_032916088;XM_032916089;XM_032916090 XP_032771978;XP_032771979;XP_032771980;XP_032771981 V-set and transmembrane domain-containing protein 2A protein-coding 626020352 LOC116898133 40S ribosomal protein S14-like 4 111171191 111171760 - 22301074;30032202 116898133 MODEL JAAIVD010000003;XM_032899508 XP_032755399 protein-coding 626020357 Acrbp acrosin binding protein INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); spermatid development (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); juvenile rheumatoid arthritis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN acrosomal membrane (ortholog); acrosomal vesicle (ortholog); extracellular region (ortholog) 6 22832155 22846243 - 30032202 116903865 MODEL JAAIVD010000024;XM_032906613 XP_032762504 acrosin-binding protein protein-coding 626020370 Pcdh15 protocadherin related 15 INVOLVED IN actin filament bundle assembly (ortholog); actin filament organization (ortholog); adult walking behavior (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 23 (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); photoreceptor outer segment (ortholog) 18 12767430 12874758 - 22301074 116887696 MODEL JAAIVD010000013;XM_032889292 XP_032745183 protocadherin-15 protein-coding 626020385 Ost4 oligosaccharyltransferase complex subunit 4, non-catalytic INVOLVED IN protein N-linked glycosylation via asparagine (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog); oligosaccharyltransferase complex B (ortholog) 7 23176370 23177655 + 30032202 116905997 MODEL JAAIVD010000026;XM_032909035 XP_032764926 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4 protein-coding 626020392 Ribc1 RIB43A domain with coiled-coils 1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) X 12734272 12745701 + 116888494 MODEL JAAIVD010000014;XM_032889770;XM_032889771;XM_032889772;XM_032889773;XM_032889774;XM_032889775;XM_032889776;XM_032889777;XM_032889778 XP_032745661;XP_032745662;XP_032745663;XP_032745664;XP_032745665;XP_032745666;XP_032745667;XP_032745668;XP_032745669 RIB43A-like with coiled-coils protein 1 protein-coding 626020425 LOC116906310 U6 spliceosomal RNA 7 129572400 129572506 - 116906310 MODEL JAAIVD010000026;XR_004388598 snrna 626020428 Tmod2 tropomodulin 2 ENCODES a protein that exhibits actin binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN learning or memory (ortholog); neuron-neuron synaptic transmission (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN growth cone (ortholog) 8 69854476 69892671 - 22301074;30032202 116906880 MODEL JAAIVD010000027;XM_032909791 XP_032765682 tropomodulin-2 protein-coding 626020442 Pde4b phosphodiesterase 4B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); calcium channel regulator activity (ortholog); cAMP binding (ortholog); INVOLVED IN cellular response to epinephrine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell periphery (ortholog); centrosome (ortholog); cytosol (ortholog) 1 51955219 52491140 - 22301074;30032202 116899642 MODEL JAAIVD010000025;XM_032901648;XM_032901656;XM_032901663 XP_032757539;XP_032757547;XP_032757554 cAMP-specific 3',5'-cyclic phosphodiesterase 4B protein-coding 626020469 LOC116895908 TD and POZ domain-containing protein 2-like 3 120628712 120629814 + 116895908 MODEL JAAIVD010000012 pseudo 626020470 LOC116895829 immunoglobulin kappa variable 3-15-like 3 76249533 76250179 - 116895829 MODEL JAAIVD010000012 pseudo 626020471 Mief1 mitochondrial elongation factor 1 ENCODES a protein that exhibits ADP binding (ortholog); GDP binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); mitochondrial fission (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); Optic Atrophy 14 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 250006787 250022088 + 30032202 116913749 MODEL JAAIVD010000025;XM_032918060;XM_032918067;XM_032918073 XP_032773951;XP_032773958;XP_032773964 mitochondrial dynamics protein MID51 protein-coding 626020485 LOC116892414 zinc finger protein 780B-like 2 168135357 168193401 - 22301074 116892414 MODEL JAAIVD010000001;XM_032894092;XM_032894093;XM_032894094;XM_032894095 XP_032749983;XP_032749984;XP_032749985;XP_032749986 protein-coding 626020503 Tmem241 transmembrane protein 241 ENCODES a protein that exhibits UDP-N-acetylglucosamine transmembrane transporter activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine transmembrane transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog) 15 31533971 31642061 + 30032202 116884871 MODEL JAAIVD010000010;XM_032886111 XP_032742002 protein-coding 626020522 LOC116884420 60S ribosomal protein L19-like 15 75171692 75185215 + 116884420 MODEL JAAIVD010000010 pseudo 626020523 LOC116889805 protein PRRC2A-like 30032202 116889805 MODEL JAAIVD010000673;XM_032890652 XP_032746543 protein-coding 626020524 LOC116900715 nuclear factor 1 B-type 1 71190872 71201171 + 22301074;30032202 116900715 MODEL JAAIVD010000025;XM_032902423 XP_032758314 protein-coding 626020530 LOC116914895 elongin-A-like 13 16777592 16778254 + 116914895 MODEL JAAIVD010000008;XM_032919338 XP_032775229 protein-coding 626020535 Gnl1 G protein nucleolar 1 (putative) INVOLVED IN DNA damage response (ortholog) 18 9172468 9181783 + 22301074;30032202 116887480 MODEL JAAIVD010000013;XM_032889100 XP_032744991 guanine nucleotide-binding protein-like 1 protein-coding 626020551 LOC116893995 olfactory receptor 51I2-like 2 101557511 101558458 + 22301074 116893995 MODEL JAAIVD010000001;XM_032895710 XP_032751601 protein-coding 626020554 Entpd2 ectonucleoside triphosphate diphosphohydrolase 2 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); apyrase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN cellular response to interferon-alpha (ortholog); cellular response to interleukin-6 (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN basement membrane (ortholog); cell body (ortholog); cell projection membrane (ortholog) 5 11781232 11786870 - 30032202 116901304 MODEL JAAIVD010000023;XM_032903103;XM_032903104;XM_032903105 XP_032758994;XP_032758995;XP_032758996 protein-coding 626020574 LOC116908227 nicotinate-nucleotide pyrophosphorylase [carboxylating]-like 8 79851686 79852995 - 116908227 MODEL JAAIVD010000027 pseudo 626020575 LOC116894376 olfactory receptor 13A1-like 2 156650052 156651005 + 22301074 116894376 MODEL JAAIVD010000001;XM_032896085 XP_032751976 protein-coding 626020579 LOC116913050 U6 spliceosomal RNA 11 31048090 31048196 + 116913050 MODEL JAAIVD010000006;XR_004389585 snrna 626020582 Fbxl16 F-box and leucine rich repeat protein 16 FOUND IN cytoplasm (ortholog) 9 3082135 3086367 + 22301074;30032202 116909147 MODEL JAAIVD010000002;XM_032912633 XP_032768524 F-box/LRR-repeat protein 16 protein-coding 626020590 Parpbp PARP1 binding protein INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog) 1 167183065 167234113 - 30032202 116907728 MODEL JAAIVD010000025;XM_032910858 XP_032766749 PCNA-interacting partner protein-coding 626020605 LOC116883923 uncharacterized LOC116883923 14 5920652 5921751 - 116883923 MODEL JAAIVD010000009;XM_032885179 XP_032741070 uncharacterized protein LOC116883923 protein-coding 626020610 Mindy2 MINDY lysine 48 deubiquitinase 2 ENCODES a protein that exhibits cysteine-type carboxypeptidase activity (ortholog); K11-linked polyubiquitin modification-dependent protein binding (ortholog); K48-linked deubiquitinase activity (ortholog); FOUND IN nucleoplasm (ortholog) 8 64941652 65001528 - 22301074;30032202 116908068 MODEL JAAIVD010000027;XM_032911341;XM_032911342;XM_032911343 XP_032767232;XP_032767233;XP_032767234 ubiquitin carboxyl-terminal hydrolase MINDY-2 protein-coding 626020629 LOC116907287 60S ribosomal protein L7-like 8 114080267 114081298 - 116907287 MODEL JAAIVD010000027 pseudo 626020630 Tmco6 transmembrane and coiled-coil domains 6 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 15 7640033 7646568 - 22301074 116884451 MODEL JAAIVD010000010;XM_032885549 XP_032741440 transmembrane and coiled-coil domain-containing protein 6 protein-coding 626020646 LOC116901082 protein BUD31 homolog 5 145712292 145718445 - 22301074;30032202 116901082 MODEL JAAIVD010000023;XM_032902647 XP_032758538 protein-coding 626020650 Amt aminomethyltransferase ENCODES a protein that exhibits aminomethyltransferase activity (ortholog); INVOLVED IN glycine decarboxylation via glycine cleavage system (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH Acidoses (ortholog); genetic disease (ortholog); glycine encephalopathy (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 8 99624241 99630225 + 22301074;30032202 116907575 MODEL JAAIVD010000027;XM_032910610 XP_032766501 aminomethyltransferase, mitochondrial protein-coding 626020663 LOC116911876 U6 spliceosomal RNA 10 35922743 35922849 - 116911876 MODEL JAAIVD010000005;XR_004389390 snrna 626020666 LOC116914134 small nucleolar RNA SNORA17 12 68614306 68614434 - 116914134 MODEL JAAIVD010000007;XR_004389695 snorna 626020669 LOC116910767 U6 spliceosomal RNA 9 73304774 73304880 + 116910767 MODEL JAAIVD010000002;XR_004389275 snrna 626020672 LOC116889778 ADP/ATP translocase 2-like 116889778 MODEL JAAIVD010000151 pseudo 626020673 Ceacam18 CEA cell adhesion molecule 18 2 155750485 155764684 - 116892229 MODEL JAAIVD010000001;XM_032893794 XP_032749685 carcinoembryonic antigen-related cell adhesion molecule 18 protein-coding 626020683 LOC116884626 zinc finger protein 474-like 15 79106420 79137150 - 116884626 MODEL JAAIVD010000010;XM_032885765 XP_032741656 protein-coding 626020691 LOC116883233 protein regulator of cytokinesis 1-like 14 58023844 58025786 - 116883233 MODEL JAAIVD010000009 pseudo 626020692 Stx3 syntaxin 3 ENCODES a protein that exhibits arachidonate binding (ortholog); SNAP receptor activity (ortholog); INVOLVED IN exocytic insertion of neurotransmitter receptor to postsynaptic membrane (ortholog); exocytosis (ortholog); long-term synaptic potentiation (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 17 (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); azurophil granule (ortholog); cell-cell junction (ortholog) 2 11048489 11096033 + 22301074;30032202 116890981 MODEL JAAIVD010000001;XM_032891649;XM_032891650;XM_032891651;XM_032891652;XM_032891653;XM_032891654;XM_032891655 XP_032747540;XP_032747541;XP_032747542;XP_032747543;XP_032747544;XP_032747545;XP_032747546 syntaxin-3 protein-coding 626020723 P2ry2 purinergic receptor P2Y2 ENCODES a protein that exhibits A1 adenosine receptor binding (ortholog); ATP binding (ortholog); G protein-coupled UTP receptor activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Dehydration (ortholog); impotence (ortholog); Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome (ortholog) 2 99295734 99309793 - 22301074;30032202 116891752 MODEL JAAIVD010000001;XM_032893064 XP_032748955 P2Y purinoceptor 2 protein-coding 626020730 LOC116908000 60S ribosomal protein L7a-like 8 69384503 69385327 - 116908000 MODEL JAAIVD010000027 pseudo 626020731 Slc5a11 solute carrier family 5 member 11 ENCODES a protein that exhibits myo-inositol transmembrane transporter activity (ortholog); INVOLVED IN myo-inositol transport (ortholog); FOUND IN plasma membrane (ortholog) 2 78600664 78643400 - 22301074;30032202 116891549 MODEL JAAIVD010000001;XM_032892711 XP_032748602 sodium/myo-inositol cotransporter 2 protein-coding 626020751 LOC116913370 ATP synthase subunit d, mitochondrial-like 12 42687365 42687828 + 116913370 MODEL JAAIVD010000007 pseudo 626020752 Yy1 YY1 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); B cell differentiation (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; mTOR signaling pathway; Notch signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); developmental and epileptic encephalopathy 78 (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); Ino80 complex (ortholog) 7 126474992 126501736 + 30032202 116905455 MODEL JAAIVD010000026;XM_032908411 XP_032764302 transcriptional repressor protein YY1 protein-coding 626020761 Eif2b5 eukaryotic translation initiation factor 2B subunit epsilon ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN astrocyte development (ortholog); astrocyte differentiation (ortholog); cytoplasmic translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Leukoencephalopathies (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) 4 5333124 5343830 + 22301074;30032202 116898691 MODEL JAAIVD010000003;XM_032899949 XP_032755840 translation initiation factor eIF-2B subunit epsilon protein-coding 626020781 LOC116910413 60S ribosomal protein L31-like 9 73343326 73343721 + 116910413 MODEL JAAIVD010000002 pseudo 626020782 LOC116897484 U1 spliceosomal RNA 3 66647673 66647828 - 116897484 MODEL JAAIVD010000012;XR_004387507 snrna 626020785 Sik3 SIK family kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cartilage development involved in endochondral bone morphogenesis (ortholog); endochondral ossification (ortholog); limb morphogenesis (ortholog); ASSOCIATED WITH Spondyloepimetaphyseal Dysplasia, Krakow Type (ortholog); FOUND IN cytoplasm (ortholog) 8 40536048 40744292 + 22301074;30032202 116906753 MODEL JAAIVD010000027;XM_032909579 XP_032765470 serine/threonine-protein kinase SIK3 protein-coding 626020813 LOC116914122 small nucleolar RNA SNORA17 12 68694993 68695121 - 116914122 MODEL JAAIVD010000007;XR_004389686 snorna 626020816 LOC116898449 glyceraldehyde-3-phosphate dehydrogenase-like 4 96506351 96581787 + 116898449 MODEL JAAIVD010000003 pseudo 626020817 Iffo1 intermediate filament family orphan 1 INVOLVED IN DNA double-strand break attachment to nuclear envelope (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein localization to site of double-strand break (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); site of double-strand break (ortholog) 6 22737851 22755274 - 116903260 MODEL JAAIVD010000024;XM_032905642;XM_032905644;XM_032905645;XM_032905646;XM_032905647;XM_032905648;XM_032905649;XM_032905650;XM_032905651 XP_032761533;XP_032761535;XP_032761536;XP_032761537;XP_032761538;XP_032761539;XP_032761540;XP_032761541;XP_032761542 protein-coding 626020848 LOC116886782 U6 spliceosomal RNA 17 5032584 5032690 + 116886782 MODEL JAAIVD010000011;XR_004386176 snrna 626020851 Cd84 CD84 molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of granulocyte macrophage colony-stimulating factor production (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of interleukin-18 production (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); FOUND IN plasma membrane (ortholog) 10 50995699 51019726 + 30032202 116910913 MODEL JAAIVD010000005;XM_032914671 XP_032770562 SLAM family member 5 protein-coding 626020862 Kncn kinocilin FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); ciliary basal body (ortholog) 1 39565954 39568969 + 30032202 116887367 MODEL JAAIVD010000025;XM_032888965 XP_032744856 protein-coding 626020868 Klhl18 kelch like family member 18 INVOLVED IN positive regulation of mitotic cell cycle phase transition (ortholog); protein ubiquitination (ortholog) 8 101008224 101066439 - 22301074 116907671 MODEL JAAIVD010000027;XM_032910765;XM_032910766 XP_032766656;XP_032766657 kelch-like protein 18 protein-coding 626020886 LOC116890300 U12 minor spliceosomal RNA 1 252572675 252572825 + 116890300 MODEL JAAIVD010000025;XR_004386535 snrna 626020889 LOC116890192 tubulin-specific chaperone A-like 1 260188625 260188941 - 116890192 MODEL JAAIVD010000025 pseudo 626020890 Fkbp14 FKBP prolyl isomerase 14 ASSOCIATED WITH Ehlers-Danlos syndrome kyphoscoliotic type 2 (ortholog) 6 86478359 86491494 + 22301074 116903771 MODEL JAAIVD010000024;XM_032906460 XP_032762351 peptidyl-prolyl cis-trans isomerase FKBP14 protein-coding 626020898 LOC116896549 signal peptide peptidase-like 3 1 82604804 82725539 - 116896549 MODEL JAAIVD010000025 pseudo 626020899 LOC116886785 U6 spliceosomal RNA 17 31778234 31778339 + 116886785 MODEL JAAIVD010000011;XR_004386178 snrna 626020902 LOC116894088 olfactory receptor 52A1-like 2 103252653 103253600 + 22301074 116894088 MODEL JAAIVD010000001;XM_032895809 XP_032751700 protein-coding 626020905 Gmfg glia maturation factor gamma INVOLVED IN actin filament debranching (ortholog); negative regulation of Arp2/3 complex-mediated actin nucleation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 2 167547857 167558268 - 22301074;30032202 116892390 MODEL JAAIVD010000001;XM_032894059;XM_032894061;XM_032894062 XP_032749950;XP_032749952;XP_032749953 protein-coding 626020922 LOC116911191 abnormal spindle-like microcephaly-associated protein homolog 10 19919963 19924075 - 22301074;30032202 116911191 MODEL JAAIVD010000005;XM_032915061 XP_032770952 protein-coding 626020932 LOC116909162 olfactory receptor-like protein I9 9 31708517 31709461 - 22301074;30032202 116909162 MODEL JAAIVD010000002;XM_032912652 XP_032768543 protein-coding 626020935 Ksr2 kinase suppressor of ras 2 ENCODES a protein that exhibits MAP-kinase scaffold activity (ortholog); mitogen-activated protein kinase kinase binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); maturity-onset diabetes of the young type 1 (ortholog); morbid obesity (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 16 36057498 36419845 - 22301074;30032202 116885129 MODEL JAAIVD010000004;XM_032886286 XP_032742177 protein-coding 626020959 Dnajc30 DnaJ heat shock protein family (Hsp40) member C30 INVOLVED IN brain development (ortholog); regulation of mitochondrial ATP synthesis coupled proton transport (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Leber Optic Atrophy, Susceptibility To (ortholog); Nuclear Type Mitochondrial Complex I Deficiency 38 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 16 18974720 18977147 - 116885397 MODEL JAAIVD010000004;XM_032886677 XP_032742568 dnaJ homolog subfamily C member 30, mitochondrial protein-coding 626020964 LOC116908426 small Cajal body-specific RNA 14 8 58595455 58595589 + 116908426 MODEL JAAIVD010000027;XR_004388958 ncrna 626020967 LOC116889518 small nucleolar RNA SNORA17 X 79555926 79556066 - 116889518 MODEL JAAIVD010000014 pseudo 626020968 LOC116904356 mitochondrial-processing peptidase subunit beta-like 6 77437383 77440414 - 116904356 MODEL JAAIVD010000024 pseudo 626020969 LOC116888775 uncharacterized LOC116888775 X 15617825 15625076 + 116888775 MODEL JAAIVD010000014;XR_004386340 ncrna 626020974 Snrpd1 small nuclear ribonucleoprotein D1 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH connective tissue disease (ortholog); nasopharynx carcinoma (ortholog); nephritis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 33486442 33497141 - 22301074;30032202 116884656 MODEL JAAIVD010000010;XM_032885811;XM_032885812;XM_032885814 XP_032741702;XP_032741703;XP_032741705 small nuclear ribonucleoprotein Sm D1 protein-coding 626020989 LOC116903622 uncharacterized LOC116903622 6 63089036 63092113 + 116903622 MODEL JAAIVD010000024;XR_004388288 ncrna 626020994 LOC116900418 olfactory receptor 4C16-like 5 70414363 70415295 - 22301074 116900418 MODEL JAAIVD010000023;XM_032902162 XP_032758053 protein-coding 626020997 Gprc5d G protein-coupled receptor class C group 5 member D FOUND IN plasma membrane (ortholog) 6 14324456 14336959 + 22301074;30032202 116904538 MODEL JAAIVD010000024;XM_032907332;XM_032907333 XP_032763223;XP_032763224 G-protein coupled receptor family C group 5 member D protein-coding 626021009 LOC116900890 olfactory receptor 4C6-like 5 70241749 70242678 + 22301074 116900890 MODEL JAAIVD010000023;XM_032902565 XP_032758456 protein-coding 626021012 LOC116893555 A-kinase anchor protein 7 2 211228111 211363805 - 30032202 116893555 MODEL JAAIVD010000001;XM_032895268 XP_032751159 A-kinase anchor protein 7 isoforms delta and gamma-like protein-coding 626021025 Phc2 polyhomeotic homolog 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 29383418 29482865 - 22301074;30032202 116896383 MODEL JAAIVD010000025;XM_032897508;XM_032897517;XM_032897526 XP_032753399;XP_032753408;XP_032753417 polyhomeotic-like protein 2 protein-coding 626021051 Pde4a phosphodiesterase 4A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); cAMP binding (ortholog); TPR domain binding (ortholog); INVOLVED IN cAMP catabolic process (ortholog); cellular response to xenobiotic stimulus (ortholog); modulation of chemical synaptic transmission (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); brucellosis (ortholog); Experimental Seizures (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extrinsic component of membrane (ortholog) 8 17428546 17477759 + 22301074;30032202 116906697 MODEL JAAIVD010000027;XM_032909487;XM_032909488;XM_032909489;XM_032909490;XM_032909491;XM_032909492 XP_032765378;XP_032765379;XP_032765380;XP_032765381;XP_032765382;XP_032765383 cAMP-specific 3',5'-cyclic phosphodiesterase 4A protein-coding 626021085 LOC116895973 glyceraldehyde-3-phosphate dehydrogenase-like 3 156197182 156198196 - 116895973 MODEL JAAIVD010000012 pseudo 626021086 Trappc3l trafficking protein particle complex subunit 3L FOUND IN TRAPP complex (ortholog) 18 24102488 24139055 + 22301074;30032202 116886905 MODEL JAAIVD010000013;XM_032888370 XP_032744261 trafficking protein particle complex 3 like;trafficking protein particle complex subunit 3-like protein protein-coding 626021093 LOC116891771 leucine-rich repeat-containing protein 51 2 100206788 100225850 - 22301074 116891771 MODEL JAAIVD010000001;XM_032893096;XM_032893097;XM_032893098;XM_032893099;XM_032893100;XM_032893101;XM_032893102 XP_032748987;XP_032748988;XP_032748989;XP_032748990;XP_032748991;XP_032748992;XP_032748993 protein-coding 626021122 LOC116909517 keratin-associated protein 9-7-like 9 54619539 54620150 + 22301074 116909517 MODEL JAAIVD010000002;XM_032913122;XM_032913123 XP_032769013;XP_032769014 keratin-associated protein 9-1-like protein-coding 626021128 Kif5a kinesin family member 5A ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); anterograde dendritic transport of neurotransmitter receptor complex (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 25 (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); central region of growth cone (ortholog) 1 205662572 205698578 - 22301074;30032202 116909910 MODEL JAAIVD010000025;XM_032913667 XP_032769558 kinesin heavy chain protein-coding 626021161 LOC116889919 olfactory receptor 6C6-like 1 160678484 160679425 + 22301074;30032202 116889919 MODEL JAAIVD010000025;XM_032890736 XP_032746627 protein-coding 626021165 LOC116912378 UDP-glucuronosyltransferase 2B7 11 1745993 1759311 + 22301074 116912378 MODEL JAAIVD010000006;XM_032916435 XP_032772326 protein-coding 626021173 Itgbl1 integrin subunit beta like 1 12 1017391 1263756 - 30032202 116913435 MODEL JAAIVD010000007;XM_032917634 XP_032773525 integrin beta-like protein 1 protein-coding 626021188 LOC116889364 cellular nucleic acid-binding protein-like X 66043799 66044311 + 22301074;30032202 116889364 MODEL JAAIVD010000014;XM_032890471 XP_032746362 protein-coding 626021191 LOC116910289 NACHT, LRR and PYD domains-containing protein 1a-like 9 44332179 44390587 - 22301074;30032202 116910289 MODEL JAAIVD010000002;XM_032914161 XP_032770052 protein-coding 626021203 Cert1 ceramide transporter 1 ENCODES a protein that exhibits ceramide binding (ortholog); ceramide transfer activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); ceramide metabolic process (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 34 (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 3 199860771 199964064 - 30032202 116897275 MODEL JAAIVD010000012;XM_032899008 XP_032754899 ceramide transfer protein protein-coding 626021225 LOC116891761 uncharacterized LOC116891761 2 99758878 99760687 - 116891761 MODEL JAAIVD010000001;XR_004386859 ncrna 626021230 LOC116887622 LIM domain only protein 7-like 18 10308607 10310290 + 116887622 MODEL JAAIVD010000013 pseudo 626021231 Igip IgA inducing protein 15 8078529 8086604 - 116884759 MODEL JAAIVD010000010;XM_032885977 XP_032741868 IgA-inducing protein homolog protein-coding 626021236 LOC116909141 olfactory receptor 1468-like 9 44468483 44469421 + 22301074;30032202 116909141 MODEL JAAIVD010000002;XM_032912627 XP_032768518 protein-coding 626021239 LOC116891204 small EDRK-rich factor 2-like 2 8419614 8420129 - 116891204 MODEL JAAIVD010000001 pseudo 626021240 LOC116892799 zinc finger protein 525-like 2 186244451 186246004 - 116892799 MODEL JAAIVD010000001 pseudo 626021241 Ano1 anoctamin 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to peptide (ortholog); chloride transmembrane transport (ortholog); ASSOCIATED WITH Moyamoya Disease 7 (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); glutamatergic synapse (ortholog) 2 5046867 5137257 + 22301074;30032202 116890819 MODEL JAAIVD010000001;XM_032891316;XM_032891317 XP_032747207;XP_032747208 anoctamin-1 protein-coding 626021273 LOC116914182 U6 spliceosomal RNA 12 23777343 23777439 + 116914182 MODEL JAAIVD010000007 pseudo 626021274 LOC116899927 U1 spliceosomal RNA 4 20167221 20167365 - 116899927 MODEL JAAIVD010000003 pseudo 626021275 LOC116887995 targeting protein for Xklp2-like X 74058323 74068127 + 116887995 MODEL JAAIVD010000014 pseudo 626021276 Fignl2 fidgetin like 2 INVOLVED IN microtubule severing (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of cell migration (ortholog); FOUND IN cell leading edge (ortholog) 1 262018073 262044629 + 22301074;30032202 116883835 MODEL JAAIVD010000025;XM_032885101 XP_032740992 putative fidgetin-like protein 2 protein-coding 626021283 Tlx3 T cell leukemia homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN central nervous system development (ortholog); GABAergic neuron differentiation (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH congenital central hypoventilation syndrome (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 9 6028551 6031247 - 22301074;30032202 116909322 MODEL JAAIVD010000002;XM_032912861 XP_032768752 T-cell leukemia homeobox protein 3 protein-coding 626021289 Hif1a hypoxia inducible factor 1 subunit alpha ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN acute-phase response (ortholog); angiogenesis (ortholog); axonal transport of mitochondrion (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute-Phase Reaction (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 88183933 88205015 + 22301074;30032202 116905165 MODEL JAAIVD010000026;XM_032907940;XM_032907941 XP_032763831;XP_032763832 hypoxia-inducible factor 1-alpha protein-coding 626021310 Mcm2 minichromosome maintenance complex component 2 ENCODES a protein that exhibits DNA helicase activity (ortholog); DNA replication origin binding (ortholog); enzyme binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to interleukin-4 (ortholog); cochlea development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autosomal dominant nonsyndromic deafness 70 (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN chromatin (ortholog); cilium (ortholog); CMG complex (ortholog) 6 57434975 57449547 + 22301074;30032202 116903517 MODEL JAAIVD010000024;XM_032906124;XM_032906125;XR_004388282 XP_032762015;XP_032762016 DNA replication licensing factor MCM2 protein-coding 626021336 Ppp1r9a protein phosphatase 1 regulatory subunit 9A ENCODES a protein that exhibits actin filament binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); calcium-mediated signaling (ortholog); cellular response to toxic substance (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); hepatocellular carcinoma (ortholog); Huntington's disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); cytoskeleton (ortholog) 6 133426611 133593464 - 30032202 116904461 MODEL JAAIVD010000024;XM_032907274 XP_032763165 neurabin-1 protein-coding 626021359 LOC116892656 uncharacterized LOC116892656 2 177146295 177147022 + 116892656 MODEL JAAIVD010000001;XR_004386961 ncrna 626021363 Scly selenocysteine lyase ENCODES a protein that exhibits amino acid binding (ortholog); protein homodimerization activity (ortholog); selenocysteine lyase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); negative regulation of cellular response to oxidative stress (ortholog); response to insulin (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; FOUND IN catalytic complex (ortholog); Golgi apparatus (ortholog) 4 163295890 163316732 + 116899636 MODEL JAAIVD010000003;XM_032901628;XM_032901629 XP_032757519;XP_032757520 protein-coding 626021383 LOC116910912 glyceraldehyde-3-phosphate dehydrogenase-like 10 50606984 50608100 - 116910912 MODEL JAAIVD010000005 pseudo 626021384 Trim56 tripartite motif containing 56 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); defense response to virus (ortholog); host-mediated suppression of symbiont invasion (ortholog); FOUND IN cytoplasm (ortholog) 16 16904871 16907903 + 22301074;30032202 116885705 MODEL JAAIVD010000004;XM_032887010 XP_032742901 E3 ubiquitin-protein ligase TRIM56 protein-coding 626021390 LOC116886000 small nucleolar RNA SNORA22 16 24181860 24181994 - 116886000 MODEL JAAIVD010000004;XR_004386072 snorna 626021393 LOC116899895 small nucleolar RNA SNORA17 4 56103790 56103907 + 116899895 MODEL JAAIVD010000003 pseudo 626021394 Slc52a2 solute carrier family 52 member 2 ENCODES a protein that exhibits 4-hydroxybutyrate receptor activity (ortholog); riboflavin transmembrane transporter activity (ortholog); INVOLVED IN flavin adenine dinucleotide biosynthetic process (ortholog); riboflavin metabolic process (ortholog); riboflavin transport (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 9 (ortholog); Brown-Vialetto-Van Laere syndrome (ortholog); Brown-Vialetto-Van Laere syndrome 1 (ortholog); FOUND IN plasma membrane (ortholog) 1 248874536 248877047 + 22301074;30032202 116913260 MODEL JAAIVD010000025;XM_032917408 XP_032773299 solute carrier family 52, riboflavin transporter, member 2 protein-coding 626021403 LOC116904550 killer cell lectin-like receptor 5 6 17540504 17553805 + 116904550 MODEL JAAIVD010000024;XM_032907347 XP_032763238 protein-coding 626021411 LOC116912012 non-histone chromosomal protein HMG-17-like 11 58963407 58970774 - 116912012 MODEL JAAIVD010000006 pseudo 626021412 Ocel1 occludin/ELL domain containing 1 13 13628497 13630285 - 30032202 116915101 MODEL JAAIVD010000008;XM_032919530;XM_032919531 XP_032775421;XP_032775422 occludin/ELL domain-containing protein 1 protein-coding 626021424 LOC116908115 olfactory receptor 7E24-like 8 16385498 16386331 + 22301074;30032202 116908115 MODEL JAAIVD010000027;XM_032911396 XP_032767287 protein-coding 626021427 LOC116914336 ATP-dependent RNA helicase DDX18-like 13 49154482 49159208 - 116914336 MODEL JAAIVD010000008 pseudo 626021428 Adamts12 ADAM metallopeptidase with thrombospondin type 1 motif 12 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN cell migration (ortholog); cell-matrix adhesion (ortholog); cellular response to BMP stimulus (ortholog); ASSOCIATED WITH Stroke (ortholog) 3 169485235 169697427 - 22301074;30032202 116896000 MODEL JAAIVD010000012;XM_032897025 XP_032752916 A disintegrin and metalloproteinase with thrombospondin motifs 12 protein-coding 626021445 Tpd52l3 TPD52 like 3 2 30106363 30108638 + 30032202 116893769 MODEL JAAIVD010000001;XM_032895471 XP_032751362 tumor protein D55 protein-coding 626021450 LOC116913555 V-type proton ATPase subunit F-like 12 72207591 72208195 - 22301074;30032202 116913555 MODEL JAAIVD010000007;XM_032917762 XP_032773653 protein-coding 626021454 Mxra8 matrix remodeling associated 8 INVOLVED IN establishment of glial blood-brain barrier (ortholog); FOUND IN cell surface (ortholog) 1 4786304 4789704 - 30032202 116891590 MODEL JAAIVD010000025;XM_032892776 XP_032748667 matrix remodeling-associated protein 8 protein-coding 626021466 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889701 MODEL JAAIVD010000052 trna 626021467 LOC116888050 centromere protein I-like X 87278919 87289044 - 22301074 116888050 MODEL JAAIVD010000014;XM_032889444 XP_032745335 protein-coding 626021476 LOC116900156 uncharacterized LOC116900156 5 23682700 23732136 + 116900156 MODEL JAAIVD010000023;XR_004387921 ncrna 626021481 Tmem252 transmembrane protein 252 2 24804650 24808694 + 116891050 MODEL JAAIVD010000001;XM_032891740 XP_032747631 protein-coding 626021487 Scai suppressor of cancer cell invasion ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of Rho protein signal transduction (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 5 16818578 16914669 - 22301074;30032202 116901376 MODEL JAAIVD010000023;XM_032903242 XP_032759133 protein SCAI protein-coding 626021509 LOC116901348 phosducin-like protein 5 14923213 14931369 - 22301074 116901348 MODEL JAAIVD010000023;XM_032903196 XP_032759087 protein-coding 626021517 LOC116887818 small integral membrane protein 30-like X 31611557 31611760 + 116887818 MODEL JAAIVD010000014;XM_032889338 XP_032745229 protein-coding 626021520 LOC116902628 small nucleolar RNA SNORA76 5 4439675 4439792 - 116902628 MODEL JAAIVD010000023;XR_004388205 snorna 626021523 C2H19orf12 chromosome 2 C19orf12 homolog INVOLVED IN apoptotic process (ortholog); autophagy (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrial membrane (ortholog) 2 160447056 160460792 - 116892252 MODEL JAAIVD010000001;XM_032893823;XM_032893824;XM_032893825;XM_032893826;XM_032893827 XP_032749714;XP_032749715;XP_032749716;XP_032749717;XP_032749718 protein C19orf12 homolog protein-coding 626021541 Tfip11 tuftelin interacting protein 11 INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); spliceosomal complex disassembly (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); extracellular matrix (ortholog) 16 41636720 41648930 - 22301074;30032202 116885126 MODEL JAAIVD010000004;XM_032886281 XP_032742172 tuftelin-interacting protein 11 protein-coding 626021559 Cd48 CD48 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN mast cell activation (ortholog); natural killer cell activation (ortholog); signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane raft (ortholog); protein-containing complex (ortholog) 10 50860538 50884051 + 116911402 MODEL JAAIVD010000005;XM_032915363 XP_032771254 CD48 antigen protein-coding 626021567 Vwa3a von Willebrand factor A domain containing 3A ASSOCIATED WITH urinary bladder cancer (ortholog) 2 80992873 81054075 - 116891579 MODEL JAAIVD010000001;XM_032892759 XP_032748650 von Willebrand factor A domain-containing protein 3A protein-coding 626021603 Rcn3 reticulocalbin 3 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); ERAD pathway (ortholog); lung epithelium development (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 154453451 154463040 + 22301074;30032202 116892171 MODEL JAAIVD010000001;XM_032893677 XP_032749568 reticulocalbin-3 protein-coding 626021614 Lmbr1 limb development membrane protein 1 INVOLVED IN embryonic digit morphogenesis (ortholog); ASSOCIATED WITH acheiropody (ortholog); genetic disease (ortholog); hypoplastic or aplastic tibia with polydactyly (ortholog) 6 157566857 157695573 + 30032202 116904242 MODEL JAAIVD010000024;XM_032907190;XM_032907191 XP_032763081;XP_032763082 limb region 1 protein homolog protein-coding 626021639 LOC116911552 glyceraldehyde-3-phosphate dehydrogenase-like 10 6743635 6773822 + 116911552 MODEL JAAIVD010000005 pseudo 626021640 Gpx3 glutathione peroxidase 3 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); mercury ion binding (ortholog); INVOLVED IN hydrogen peroxide catabolic process (ortholog); response to 2,3,7,8-tetrachlorodibenzodioxine (ortholog); response to corticosterone (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog) 9 37340219 37348316 + 22301074;30032202 116909113 MODEL JAAIVD010000002;XM_032912589 XP_032768480 protein-coding 626021649 Ccdc142 coiled-coil domain containing 142 ASSOCIATED WITH dystonia (ortholog) 6 63116504 63122699 - 116903627 MODEL JAAIVD010000024;XM_032906287 XP_032762178 coiled-coil domain-containing protein 142 protein-coding 626021662 Plec plectin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ankyrin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actomyosin contractile ring assembly actin filament organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 1 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2Q (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basal plasma membrane (ortholog) 1 248500546 248535672 - 22301074;30032202 116912950 MODEL JAAIVD010000025;XM_032917179 XP_032773070 protein-coding 626021699 LOC116893517 ATP synthase subunit gamma, mitochondrial-like 2 191983061 191983794 - 116893517 MODEL JAAIVD010000001 pseudo 626021700 Akap17a A-kinase anchoring protein 17A ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleus (ortholog) 16 14897490 14902226 - 30032202 116885888 MODEL JAAIVD010000004;XM_032887207;XM_032887209;XM_032887210;XM_032887211 XP_032743098;XP_032743100;XP_032743101;XP_032743102 A-kinase anchor protein 17A protein-coding 626021716 LOC116893359 glyceraldehyde-3-phosphate dehydrogenase-like 2 160395280 160418542 - 116893359 MODEL JAAIVD010000001 pseudo 626021717 LOC116914116 small nucleolar RNA SNORA17 12 56921451 56921581 - 116914116 MODEL JAAIVD010000007;XR_004389680 snorna 626021720 LOC116913589 olfactory receptor 4K15 12 73097978 73098961 - 22301074 116913589 MODEL JAAIVD010000007;XM_032917818 XP_032773709 protein-coding 626021724 LOC116889898 olfactory receptor 6C74 1 160006820 160007758 + 22301074;30032202 116889898 MODEL JAAIVD010000025;XM_032890721 XP_032746612 protein-coding 626021727 LOC116907067 uncharacterized LOC116907067 1 156996781 157005139 - 116907067 MODEL JAAIVD010000025 pseudo 626021728 LOC116894260 olfactory receptor 2AG1-like 2 115459969 115460916 - 22301074 116894260 MODEL JAAIVD010000001;XM_032895964 XP_032751855 protein-coding 626021731 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28507103 28507174 + 116886025 MODEL JAAIVD010000004 trna 626021732 LOC116893249 serine/arginine-rich splicing factor 7-like 2 129814560 129890376 - 116893249 MODEL JAAIVD010000001 pseudo 626021733 Spocd1 SPOC domain containing 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN gene silencing by piRNA-directed DNA methylation (ortholog); spermatogenesis (ortholog); transposable element silencing by piRNA-mediated DNA methylation (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN nucleus (ortholog) 1 28197263 28225614 - 22301074;30032202 116894383 MODEL JAAIVD010000025;XM_032896403 XP_032752294 SPOC domain-containing protein 1 protein-coding 626021750 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889644 MODEL JAAIVD010000038 trna 626021751 LOC116883501 alpha-actinin-2 14 26047016 26094973 - 30032202 116883501 MODEL JAAIVD010000009;XM_032884668;XM_032884669 XP_032740559;XP_032740560 protein-coding 626021769 Dnajb1 DnaJ heat shock protein family (Hsp40) member B1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); forebrain development (ortholog); negative regulation of inclusion body assembly (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 17 16655029 16658727 - 22301074;30032202 116886344 MODEL JAAIVD010000011;XM_032887794;XM_032887796 XP_032743685;XP_032743687 dnaJ homolog subfamily B member 1 protein-coding 626021782 Cadm2 cell adhesion molecule 2 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); malignant astrocytoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); neuronal cell body membrane (ortholog) 4 74638662 75576865 + 116897715 MODEL JAAIVD010000003;XM_032899174 XP_032755065 protein-coding 626021797 LOC116911842 small nucleolar RNA SNORA17 10 54568159 54568278 + 116911842 MODEL JAAIVD010000005 pseudo 626021798 Nacc1 nucleus accumbens associated 1 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 15604632 15622328 + 22301074;30032202 116886302 MODEL JAAIVD010000011;XM_032887743;XM_032887744;XM_032887745 XP_032743634;XP_032743635;XP_032743636 nucleus accumbens-associated protein 1 protein-coding 626021813 Vps33a VPS33A core subunit of CORVET and HOPS complexes ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); endosome to lysosome transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); Mucopolysaccharidosis-Plus Syndrome (ortholog); FOUND IN AP-3 adaptor complex (ortholog); autophagosome (ortholog); clathrin complex (ortholog) 16 30290921 30317370 + 22301074;30032202 116885468 MODEL JAAIVD010000004;XM_032886749 XP_032742640 vacuolar protein sorting-associated protein 33A protein-coding 626021830 LOC116883842 uncharacterized LOC116883842 14 52429181 52439151 + 116883842 MODEL JAAIVD010000009;XR_004385798 ncrna 626021835 LOC116900272 olfactory receptor 1038-like 5 63331671 63332645 - 22301074;30032202 116900272 MODEL JAAIVD010000023;XM_032902024 XP_032757915 protein-coding 626021839 LOC116891298 pyrethroid hydrolase Ces2e-like 2 54845709 54853855 - 30032202 116891298 MODEL JAAIVD010000001;XM_032892208 XP_032748099 protein-coding 626021856 Lias lipoic acid synthetase ENCODES a protein that exhibits lipoate synthase activity (ortholog); INVOLVED IN inflammatory response (ortholog); lipoate biosynthetic process (ortholog); neural tube closure (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hyperglycinemia, Lactic Acidosis, and Seizures (ortholog); pneumonia (ortholog); FOUND IN mitochondrion (ortholog) 11 22412067 22428555 + 22301074;30032202 116912478 MODEL JAAIVD010000006;XM_032916542;XM_032916543 XP_032772433;XP_032772434 lipoyl synthase, mitochondrial protein-coding 626021873 Hes2 hes family bHLH transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 1 8579736 8581232 - 22301074;30032202 116886119 MODEL JAAIVD010000025;XM_032887460 XP_032743351 transcription factor HES-2 protein-coding 626021881 LOC116884805 40S ribosomal protein SA-like 15 3359457 3360325 - 116884805 MODEL JAAIVD010000010 pseudo 626021882 LOC116899878 small nucleolar RNA SNORA17 4 169410117 169410241 - 116899878 MODEL JAAIVD010000003 pseudo 626021883 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42429854 42429941 + 116884230 MODEL JAAIVD010000009 trna 626021884 LOC116914192 U6 spliceosomal RNA 12 83765412 83765512 + 116914192 MODEL JAAIVD010000007 pseudo 626021885 Ppp4r1 protein phosphatase 4 regulatory subunit 1 4 175774933 175831947 + 22301074;30032202 116899697 MODEL JAAIVD010000003;XM_032901721 XP_032757612 serine/threonine-protein phosphatase 4 regulatory subunit 1 protein-coding 626021909 Sall4 spalt like transcription factor 4 INVOLVED IN embryonic limb morphogenesis (ortholog); heart development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Congenital Limb Deformities (ortholog); Craniofacial Abnormalities (ortholog); Duane retraction syndrome (ortholog); FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 149232900 149248859 + 30032202 116900759 MODEL JAAIVD010000023;XM_032902468;XM_032902469;XM_032902470;XM_032902471;XM_032902472 XP_032758359;XP_032758360;XP_032758361;XP_032758362;XP_032758363 sal-like protein 4 protein-coding 626021922 Aebp2 AE binding protein 2 ENCODES a protein that exhibits transcription coregulator activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); Waardenburg syndrome (ortholog); FOUND IN ESC/E(Z) complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 8893605 8930431 - 30032202 116903136 MODEL JAAIVD010000024;XM_032905491;XM_032905492 XP_032761382;XP_032761383 zinc finger protein AEBP2 protein-coding 626021938 Ciao1 cytosolic iron-sulfur assembly component 1 INVOLVED IN protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Multiple mitochondrial dysfunctions syndrome 10 (ortholog); neuromuscular disease (ortholog); FOUND IN cytoplasm (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog); MMXD complex (ortholog) 5 106021919 106027318 - 22301074;30032202 116901930 MODEL JAAIVD010000023;XM_032904153 XP_032760044 probable cytosolic iron-sulfur protein assembly protein CIAO1 protein-coding 626021949 Fermt2 FERM domain containing kindlin 2 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN adherens junction maintenance (ortholog); cell adhesion (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); angle-closure glaucoma (ortholog); urinary bladder cancer (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cytoplasm (ortholog) 12 77507364 77575160 + 22301074;30032202 116913363 MODEL JAAIVD010000007;XM_032917523;XM_032917524;XM_032917525;XM_032917526 XP_032773414;XP_032773415;XP_032773416;XP_032773417 fermitin family homolog 2;fermitin family member 2 protein-coding 626021973 Arl4d ARF like GTPase 4D ASSOCIATED WITH COVID-19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 9 60954775 60956944 + 22301074;30032202 116909921 MODEL JAAIVD010000002;XM_032913684;XM_032913685 XP_032769575;XP_032769576 ADP ribosylation factor like GTPase 4D;ADP-ribosylation factor-like protein 4D protein-coding 626021983 LOC116903661 uncharacterized LOC116903661 1 138689865 138699517 - 116903661 MODEL JAAIVD010000025;XR_004388289 ncrna 626021987 LOC116900745 60S ribosomal protein L24-like 5 142936126 142936668 - 116900745 MODEL JAAIVD010000023;XR_004387947 pseudo 626021990 LOC116906246 immunoglobulin heavy variable 3-74-like 7 122168093 122175962 - 116906246 MODEL JAAIVD010000026 pseudo 626021991 LOC116894327 prostatic steroid-binding protein C1-like 2 151627847 151631952 + 116894327 MODEL JAAIVD010000001;XM_032896022 XP_032751913 protein-coding 626021998 LOC116906208 Ig heavy chain V region PJ14-like 7 121230279 121230822 + 116906208 MODEL JAAIVD010000026 pseudo 626021999 Map10 microtubule associated protein 10 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); mitotic spindle midzone assembly (ortholog); positive regulation of cytokinesis (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); midbody (ortholog) 17 45186635 45189507 + 22301074;30032202 116886518 MODEL JAAIVD010000011;XM_032888029 XP_032743920 microtubule-associated protein 10 protein-coding 626022004 Abhd1 abhydrolase domain containing 1 7 23129062 23134071 - 30032202 116905991 MODEL JAAIVD010000026;XM_032909020 XP_032764911 protein ABHD1 protein-coding 626022017 LOC116902149 uncharacterized LOC116902149 5 132990370 132997977 - 116902149 MODEL JAAIVD010000023;XR_004388044 ncrna 626022021 LOC116898132 thymosin beta-10-like 4 110857996 110858183 - 22301074;30032202 116898132 MODEL JAAIVD010000003;XM_032899507 XP_032755398 protein-coding 626022026 Igsf22 immunoglobulin superfamily member 22 2 152299064 152317580 + 22301074 116893314 MODEL JAAIVD010000001;XM_032895137 XP_032751028 protein-coding 626022047 Gabarapl1 GABA type A receptor associated protein like 1 ENCODES a protein that exhibits phospholipid binding (ortholog); Tat protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN glycophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN autophagosome (ortholog); cell body (ortholog); ciliary basal body (ortholog) 6 18056732 18065985 - 30032202 116903190 MODEL JAAIVD010000024;XM_032905567 XP_032761458 gamma-aminobutyric acid receptor-associated protein-like 1 protein-coding 626022055 LOC116888405 60S ribosomal protein L29-like X 56883070 56883536 + 116888405 MODEL JAAIVD010000014 pseudo 626022056 LOC116911994 PRAME family member 8-like 11 48621845 48624619 - 22301074;30032202 116911994 MODEL JAAIVD010000006;XM_032915899 XP_032771790 protein-coding 626022061 LOC116887887 melanoma-associated antigen B4-like X 49998205 49999308 + 30032202 116887887 MODEL JAAIVD010000014;XM_032889368 XP_032745259 protein-coding 626022065 LOC116889873 TOX high mobility group box family member 4-like 1 242185239 242187104 + 116889873 MODEL JAAIVD010000025 pseudo 626022066 LOC116912891 ubiquitin-like protein FUBI 11 72174750 72175405 - 116912891 MODEL JAAIVD010000006 pseudo 626022067 LOC116906044 40S ribosomal protein S7-like 7 44558798 44559436 - 116906044 MODEL JAAIVD010000026 pseudo 626022068 Fnip2 folliculin interacting protein 2 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Leukoencephalopathies (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 73833243 73942438 + 30032202 116896764 MODEL JAAIVD010000012;XM_032898213;XM_032898214;XM_032898215;XM_032898216;XM_032898217 XP_032754104;XP_032754105;XP_032754106;XP_032754107;XP_032754108 folliculin-interacting protein 2 protein-coding 626022098 Pdzd4 PDZ domain containing 4 ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); intellectual disability (ortholog) X 128757588 128788088 + 22301074 116889116 MODEL JAAIVD010000014;XM_032890281;XM_032890282;XM_032890283;XM_032890284 XP_032746172;XP_032746173;XP_032746174;XP_032746175 PDZ domain-containing protein 4 protein-coding 626022118 Nudt16l1 nudix hydrolase 16 like 1 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); protein homodimerization activity (ortholog); snoRNA binding (ortholog); INVOLVED IN negative regulation of double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN syndecan signaling pathway; FOUND IN nucleus (ortholog) 9 16965030 16967138 - 30032202 116909820 MODEL JAAIVD010000002;XM_032913533 XP_032769424 tudor-interacting repair regulator protein protein-coding 626022125 Lpar5 lysophosphatidic acid receptor 5 INVOLVED IN behavioral response to pain (ortholog) 6 22815721 22830116 - 22301074;30032202 116903263 MODEL JAAIVD010000024;XM_032905655;XM_032905656;XM_032905657 XP_032761546;XP_032761547;XP_032761548 protein-coding 626022136 LOC116908172 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 8 48896299 48896683 + 116908172 MODEL JAAIVD010000027 pseudo 626022137 LOC116900603 olfactory receptor 1052-like 5 64180004 64180942 - 22301074;30032202 116900603 MODEL JAAIVD010000023;XM_032902319 XP_032758210 protein-coding 626022140 LOC116894637 60S ribosomal protein L27-like 2 196582248 196582565 - 30032202 116894637 MODEL JAAIVD010000001;XM_032896352 XP_032752243 protein-coding 626022143 Pheta1 PH domain containing endocytic trafficking adaptor 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN endosome organization (ortholog); receptor recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); recycling endosome (ortholog) 16 31987917 31993079 - 30032202 116885634 MODEL JAAIVD010000004;XM_032886938;XM_032886939;XM_032886940 XP_032742829;XP_032742830;XP_032742831 sesquipedalian-1 protein-coding 626022155 Pear1 platelet endothelial aggregation receptor 1 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); platelet aggregation (ortholog); positive regulation of platelet activation (ortholog); FOUND IN lamellipodium (ortholog); phagocytic cup (ortholog); plasma membrane (ortholog) 3 65798933 65811257 + 22301074;30032202 116896716 MODEL JAAIVD010000012;XM_032898135 XP_032754026 protein-coding 626022182 Snx4 sorting nexin 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); insulin receptor binding (ortholog); leptin receptor binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of histamine secretion by mast cell (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); early endosome (ortholog) 4 18054318 18109375 + 22301074;30032202 116898792 MODEL JAAIVD010000003;XM_032900137 XP_032756028 sorting nexin-4 protein-coding 626022200 Caps2 calcyphosine 2 1 190296899 190359661 + 22301074 116908943 MODEL JAAIVD010000025;XM_032912404 XP_032768295 calcyphosin-2 protein-coding 626022222 LOC116883912 40S ribosomal protein S26-like 14 1543827 1544681 - 116883912 MODEL JAAIVD010000009 pseudo 626022223 LOC116914195 U6 spliceosomal RNA 12 91230614 91230705 + 116914195 MODEL JAAIVD010000007 pseudo 626022224 LOC116915088 glyceraldehyde-3-phosphate dehydrogenase-like 13 17990123 17991129 + 116915088 MODEL JAAIVD010000008 pseudo 626022225 LOC116904791 small nucleolar RNA U89 6 23168751 23169010 - 116904791 MODEL JAAIVD010000024;XR_004388453 snorna 626022228 Entrep1 endosomal transmembrane epsin interactor 1 ENCODES a protein that exhibits ubiquitin ligase activator activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); negative adaptation of signaling pathway (ortholog); receptor internalization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); plasma membrane (ortholog) 2 24090206 24145913 - 22301074 116891044 MODEL JAAIVD010000001;XM_032891729 XP_032747620 Fam189a2 family with sequence similarity 189 member A2;protein FAM189A2 protein-coding 626022243 Pim2 Pim-2 proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog) X 14251107 14256467 - 22301074;30032202 116888905 MODEL JAAIVD010000014;XM_032890163 XP_032746054 serine/threonine-protein kinase pim-2 protein-coding 626022253 LOC116887743 small nucleolar RNA SNORD65 18 16982130 16982201 - 116887743 MODEL JAAIVD010000013;XR_004386249 snorna 626022256 LOC116889887 vomeronasal type-2 receptor 116-like 1 158407869 158417073 - 116889887 MODEL JAAIVD010000025 pseudo 626022257 Sfrp2 secreted frizzled related protein 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme activator activity (ortholog); fibronectin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); inflammatory bowel disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 3 69800039 69807773 - 30032202 116895441 MODEL JAAIVD010000012;XM_032896717 XP_032752608 secreted frizzled-related protein 2 protein-coding 626022264 Mob3a MOB kinase activator 3A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 154191240 154198607 + 30032202 116904943 MODEL JAAIVD010000025;XM_032907591 XP_032763482 protein-coding 626022271 LOC116904501 vomeronasal type-1 receptor 100-like 6 159298935 159302209 - 116904501 MODEL JAAIVD010000024 pseudo 626022272 Macc1 MET transcriptional regulator MACC1 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN mitochondrion (ortholog) 7 116693587 116736705 - 22301074;30032202 116905881 MODEL JAAIVD010000026;XM_032908871 XP_032764762 metastasis-associated in colon cancer protein 1 protein-coding 626022282 Znf454 zinc finger protein 454 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 9 33524343 33536191 - 30032202 116908593 MODEL JAAIVD010000002;XM_032911812;XM_032911813 XP_032767703;XP_032767704 protein-coding 626022293 Pnpla6 patatin like domain 6, lysophospholipase ENCODES a protein that exhibits phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amyotrophic lateral sclerosis (ortholog); Boucher-Neuhauser syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 16 1444652 1473500 + 22301074;30032202 116885146 MODEL JAAIVD010000004;XM_032886338;XM_032886339;XM_032886340;XM_032886341;XM_032886342;XM_032886343;XM_032886344;XM_032886345;XM_032886346;XM_032886347;XM_032886348;XM_032886349;XM_032886350;XM_032886351 XP_032742229;XP_032742230;XP_032742231;XP_032742232;XP_032742233;XP_032742234;XP_032742235;XP_032742236;XP_032742237;XP_032742238;XP_032742239;XP_032742240;XP_032742241;XP_032742242 neuropathy target esterase;patatin like phospholipase domain containing 6 protein-coding 626022358 LOC116899876 small nucleolar RNA SNORA17 4 63826327 63826465 - 116899876 MODEL JAAIVD010000003 pseudo 626022359 LOC116885323 elongin-C-like 16 43536640 43537120 - 22301074;30032202 116885323 MODEL JAAIVD010000004;XM_032886588 XP_032742479 protein-coding 626022364 LOC116889791 secretin receptor-like 22301074;30032202 116889791 MODEL JAAIVD010000383;XM_032890641 XP_032746532 protein-coding 626022365 LOC116887506 sorting nexin-3-like 18 42221815 42253498 + 30032202 116887506 MODEL JAAIVD010000013;XM_032889126 XP_032745017 protein-coding 626022376 Alpk3 alpha kinase 3 INVOLVED IN cardiac muscle cell development (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); cardiovascular system disease (ortholog); Dilated Cardiomyopathy with Left Ventricular Noncompaction (ortholog); FOUND IN nucleus (ortholog) 2 119141622 119189994 - 22301074;30032202 116894269 MODEL JAAIVD010000001;XM_032895979;XM_032895980 XP_032751870;XP_032751871 alpha-protein kinase 3 protein-coding 626022396 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72220141 72220229 - 116914212 MODEL JAAIVD010000007 trna 626022397 LOC116913842 ribosome biogenesis regulatory protein homolog 12 31094290 31109684 - 116913842 MODEL JAAIVD010000007 pseudo 626022398 Garin3 golgi associated RAB2 interactor family member 3 INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); cell morphogenesis (ortholog); FOUND IN Golgi apparatus (ortholog); sperm head (ortholog) 9 29116255 29119295 + 22301074;30032202 116910433 MODEL JAAIVD010000002;XM_032914277 XP_032770168 Fam71b family with sequence similarity 71 member B;golgi associated RAB2B interactor family member 3;protein FAM71B protein-coding 626022402 Emg1 EMG1 N1-specific pseudouridine methyltransferase ENCODES a protein that exhibits identical protein binding (ortholog); rRNA (pseudouridine) methyltransferase activity (ortholog); INVOLVED IN blastocyst development (ortholog); nucleologenesis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH Bowen-Conradi syndrome (ortholog); genetic disease (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 23172014 23180290 + 22301074;30032202 116903288 MODEL JAAIVD010000024;XM_032905710 XP_032761601 ribosomal RNA small subunit methyltransferase NEP1 protein-coding 626022412 LOC116886872 ubiquitin-conjugating enzyme E2 N-like 18 32852069 32852571 + 116886872 MODEL JAAIVD010000013 pseudo 626022413 Elmo2 engulfment and cell motility 2 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Primary Intraosseous Vascular Malformation (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 5 152635685 152671879 + 30032202 116902335 MODEL JAAIVD010000023;XM_032904809;XM_032904810 XP_032760700;XP_032760701 engulfment and cell motility protein 2 protein-coding 626022440 LOC116911606 kinesin-like protein KIF21B 10 25657708 25739729 - 22301074;30032202 116911606 MODEL JAAIVD010000005;XM_032915581 XP_032771472 protein-coding 626022465 Tonsl tonsoku like, DNA repair protein ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); protein localization to chromatin (ortholog); replication fork processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN DNA replication factor A complex (ortholog); FACT complex (ortholog); MCM complex (ortholog) 1 248953757 248968208 - 22301074 116913311 MODEL JAAIVD010000025;XM_032917454 XP_032773345 tonsoku-like protein protein-coding 626022495 Inpp5e inositol polyphosphate-5-phosphatase E ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); negative regulation of protein localization to cilium (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH Ciliary Motility Disorders (ortholog); cleft palate (ortholog); clubfoot (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); Golgi membrane (ortholog) 5 10678755 10691581 + 22301074;30032202 116901268 MODEL JAAIVD010000023;XM_032903025;XM_032903026 XP_032758916;XP_032758917 phosphatidylinositol polyphosphate 5-phosphatase type IV protein-coding 626022515 Mrm1 mitochondrial rRNA methyltransferase 1 ENCODES a protein that exhibits rRNA (guanosine-2'-O-)-methyltransferase activity (ortholog); INVOLVED IN rRNA processing (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 85878587 85883780 + 22301074;30032202 116909516 MODEL JAAIVD010000002;XM_032913121 XP_032769012 rRNA methyltransferase 1, mitochondrial protein-coding 626022524 Enc1 ectodermal-neural cortex 1 INVOLVED IN negative regulation of translation (ortholog); positive regulation of neuron projection development (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 3 199374620 199380182 - 22301074 116897266 MODEL JAAIVD010000012;XM_032898998 XP_032754889 ectoderm-neural cortex protein 1 protein-coding 626022530 Hspb2 heat shock protein family B (small) member 2 INVOLVED IN somatic muscle development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 45215760 45217140 - 22301074;30032202 116907363 MODEL JAAIVD010000027;XM_032910310;XM_032910311 XP_032766201;XP_032766202 heat shock protein beta-2 protein-coding 626022540 LOC116913896 HCLS1-associated protein X-1-like 12 22884644 22885476 + 116913896 MODEL JAAIVD010000007 pseudo 626022541 LOC116894065 olfactory receptor 51A7 2 102883960 102884923 + 22301074 116894065 MODEL JAAIVD010000001;XM_032895788 XP_032751679 protein-coding 626022545 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 19663415 19663487 + 116889584 MODEL JAAIVD010000014 trna 626022546 Dnm1l dynamin 1 like ENCODES a protein that exhibits BH2 domain binding (ortholog); clathrin binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN calcium ion transport (ortholog); cellular response to hypoxia (ortholog); cellular response to lipid (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); chronic kidney disease (ortholog); Coxsackievirus Infections (ortholog); FOUND IN brush border (ortholog); clathrin coat of trans-Golgi network vesicle (ortholog); clathrin-coated pit (ortholog) 4 1578196 1629112 - 22301074;30032202 116898613 MODEL JAAIVD010000003;XM_032899810;XM_032899811;XM_032899812;XM_032899813;XM_032899814;XM_032899815;XM_032899816;XM_032899817;XM_032899818;XM_032899820;XM_032899821;XM_032899822;XM_032899823;XM_032899824 XP_032755701;XP_032755702;XP_032755703;XP_032755704;XP_032755705;XP_032755706;XP_032755707;XP_032755708;XP_032755709;XP_032755711;XP_032755712;XP_032755713;XP_032755714;XP_032755715 dynamin-1-like protein protein-coding 626022589 LOC116887437 H-2 class I histocompatibility antigen, Q10 alpha chain-like 18 8319607 8320183 + 30032202 116887437 MODEL JAAIVD010000013;XM_032889050 XP_032744941 protein-coding 626022594 LOC116887839 steryl-sulfatase-like X 38667761 38675255 + 30032202 116887839 MODEL JAAIVD010000014;XM_032889349 XP_032745240 protein-coding 626022605 LOC116893174 olfactory receptor 51G2-like 2 103328943 103331777 - 116893174 MODEL JAAIVD010000001 pseudo 626022606 LOC116887835 odorant-binding protein-like X 37674977 37677123 + 30032202 116887835 MODEL JAAIVD010000014;XM_032889347 XP_032745238 protein-coding 626022613 LOC116893225 vomeronasal type-2 receptor 116-like 2 114990282 115005299 + 116893225 MODEL JAAIVD010000001 pseudo 626022614 LOC116886753 small nucleolar RNA U13 17 31879708 31879811 + 116886753 MODEL JAAIVD010000011;XR_004386155 snorna 626022617 Tmem178a transmembrane protein 178A INVOLVED IN negative regulation of osteoclast differentiation (ortholog); regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 7 12048505 12107330 - 30032202 116905837 MODEL JAAIVD010000026;XM_032908810 XP_032764701 protein-coding 626022625 LOC116900058 heterogeneous nuclear ribonucleoprotein A3-like 5 5685519 5686582 + 116900058 MODEL JAAIVD010000023 pseudo 626022626 LOC116899976 60S ribosomal protein L35a-like 5 133754439 133754769 + 116899976 MODEL JAAIVD010000023 pseudo 626022627 Dpep3 dipeptidase 3 ENCODES a protein that exhibits dipeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN acrosomal vesicle (ortholog); membrane (ortholog); plasma membrane (ortholog) 17 25712899 25718725 - 22301074;30032202 116886475 MODEL JAAIVD010000011;XM_032887979 XP_032743870 protein-coding 626022641 LOC116902830 taste receptor type 2 member 13 6 16466261 16467178 - 22301074;30032202 116902830 MODEL JAAIVD010000024;XM_032905163 XP_032761054 protein-coding 626022644 Gpd1 glycerol-3-phosphate dehydrogenase 1 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); glycerol-3-phosphate dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to tumor necrosis factor (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Hypertriglyceridemia, Transient Infantile (ortholog); FOUND IN cytosol (ortholog) 1 272517361 272524856 + 22301074;30032202 116885220 MODEL JAAIVD010000025;XM_032886459 XP_032742350 glycerol-3-phosphate dehydrogenase [NAD(+)], cytoplasmic protein-coding 626022656 Sfta2 surfactant associated 2 18 8868827 8869782 + 116887461 MODEL JAAIVD010000013;XM_032889068 XP_032744959 surfactant-associated protein 2 protein-coding 626022663 Ano5 anoctamin 5 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); plasma membrane repair (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2L (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog); vesicle (ortholog) 2 149036636 149090056 - 22301074;30032202 116893291 MODEL JAAIVD010000001;XM_032895124 XP_032751015 anoctamin-5 protein-coding 626022684 Sh2d1a SH2 domain containing 1A ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN humoral immune response (ortholog); natural killer cell activation (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Holoprosencephaly 13, X-linked (ortholog); FOUND IN cytoplasm (ortholog) X 109359640 109380822 + 22301074 116889191 MODEL JAAIVD010000014;XM_032890351 XP_032746242 SH2 domain-containing protein 1A protein-coding 626022692 LOC116887989 high mobility group protein B1-like X 72480262 72491110 + 116887989 MODEL JAAIVD010000014 pseudo 626022693 LOC116906140 proline-rich receptor-like protein kinase PERK14 7 91730885 91864543 - 116906140 MODEL JAAIVD010000026;XM_032909128 XP_032765019 protein-coding 626022699 Hvcn1 hydrogen voltage gated channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); voltage-gated monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to pH (ortholog); cellular response to zinc ion (ortholog); positive regulation of superoxide anion generation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); middle cerebral artery infarction (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) 16 31612146 31635249 - 30032202 116885429 MODEL JAAIVD010000004;XM_032886715 XP_032742606 voltage-gated hydrogen channel 1 protein-coding 626022709 Cln8 CLN8 transmembrane ER and ERGIC protein ENCODES a protein that exhibits ceramide binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); adult walking behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); congenital myopathy 1A (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 13 68926354 68936538 - 22301074;30032202 116914700 MODEL JAAIVD010000008;XM_032919124;XM_032919125 XP_032775015;XP_032775016 protein CLN8 protein-coding 626022719 LOC116892967 uncharacterized LOC116892967 2 215104007 215117820 + 116892967 MODEL JAAIVD010000001;XR_004386988;XR_004386989 ncrna 626022727 LOC116915135 small nucleolar RNA SNORA17 13 8937006 8937122 + 116915135 MODEL JAAIVD010000008 pseudo 626022728 LOC116893491 vomeronasal type-1 receptor 4-like 2 182514389 182515324 - 22301074;30032202 116893491 MODEL JAAIVD010000001;XM_032895238 XP_032751129 protein-coding 626022731 Cryl1 crystallin lambda 1 ENCODES a protein that exhibits L-gulonate 3-dehydrogenase activity (ortholog); NAD+ binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN D-glucuronate catabolic process to D-xylulose 5-phosphate (ortholog); ASSOCIATED WITH perinatal necrotizing enterocolitis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) 12 67430266 67550389 + 22301074;30032202 116913792 MODEL JAAIVD010000007;XM_032918099 XP_032773990 lambda-crystallin homolog protein-coding 626022743 LOC116912971 small nucleolar RNA SNORA48 11 72832985 72833124 + 116912971 MODEL JAAIVD010000006;XR_004389537 snorna 626022746 Rtcb RNA 2',3'-cyclic phosphate and 5'-OH ligase ENCODES a protein that exhibits RNA ligase (GTP) activity (ortholog); vinculin binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); placenta development (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 1 162648490 162667263 + 22301074;30032202 116907305 MODEL JAAIVD010000025;XM_032910254 XP_032766145 tRNA-splicing ligase RtcB homolog protein-coding 626022762 Ptgr2 prostaglandin reductase 2 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); zinc ion binding (ortholog); INVOLVED IN prostaglandin metabolic process (ortholog) 7 98399702 98420819 + 22301074;30032202 116906158 MODEL JAAIVD010000026;XM_032909139 XP_032765030 protein-coding 626022774 Eef1b2 eukaryotic translation elongation factor 1 beta 2 INVOLVED IN response to ethanol (ortholog); PARTICIPATES IN translation elongation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 4 137164988 137167758 + 22301074;30032202 116899443 MODEL JAAIVD010000003;XM_032901214 XP_032757105 elongation factor 1-beta protein-coding 626022784 LOC116911840 U1 spliceosomal RNA 10 69399468 69399604 - 116911840 MODEL JAAIVD010000005 pseudo 626022785 Spats2l spermatogenesis associated serine rich 2 like ASSOCIATED WITH atrial fibrillation (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 4 134441156 134540336 - 22301074;30032202 116899437 MODEL JAAIVD010000003;XM_032901193;XM_032901194 XP_032757084;XP_032757085 SPATS2-like protein protein-coding 626022804 Wdhd1 WD repeat and HMG-box DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN pericentric heterochromatin organization (ortholog); regulation of chromosome organization (ortholog); RNA processing (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleoplasm (ortholog) 12 75776970 75810037 + 22301074;30032202 116913666 MODEL JAAIVD010000007;XM_032917954 XP_032773845 WD repeat and HMG-box DNA-binding protein 1 protein-coding 626022833 Prmt2 protein arginine methyltransferase 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 106885319 106910309 + 22301074;30032202 116907869 MODEL JAAIVD010000027;XM_032911057 XP_032766948 protein arginine N-methyltransferase 2 protein-coding 626022848 LOC116911631 uncharacterized LOC116911631 1 231840732 231858476 - 116911631 MODEL JAAIVD010000025;XR_004389331 ncrna 626022854 LOC116894101 olfactory receptor 688 2 103483032 103484000 + 22301074 116894101 MODEL JAAIVD010000001;XM_032895820 XP_032751711 protein-coding 626022858 LOC116895305 ran guanine nucleotide release factor-like 3 21549644 21550228 - 30032202 116895305 MODEL JAAIVD010000012;XM_032896617 XP_032752508 protein-coding 626022863 LOC116912063 heterogeneous nuclear ribonucleoprotein K-like 11 98187044 98188393 + 116912063 MODEL JAAIVD010000006 pseudo 626022864 Gpatch2 G-patch domain containing 2 ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN nuclear speck (ortholog) 10 65338782 65481512 + 22301074 116911791 MODEL JAAIVD010000005;XM_032915786;XM_032915787;XM_032915789;XM_032915790;XM_032915791;XM_032915792 XP_032771677;XP_032771678;XP_032771680;XP_032771681;XP_032771682;XP_032771683 G patch domain-containing protein 2 protein-coding 626022893 Dpm3 dolichyl-phosphate mannosyltransferase subunit 3, regulatory ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN dolichol phosphate mannose biosynthetic process (ortholog); obsolete dolichol metabolic process (ortholog); ASSOCIATED WITH Congenital Disorder of Glycosylation Type 1O (ortholog); muscular dystrophy-dystroglycanopathy type B15 (ortholog); myopathy (ortholog); FOUND IN dolichol-phosphate-mannose synthase complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 64407604 64408181 - 22301074;30032202 116896655 MODEL JAAIVD010000012;XM_032897986;XM_032897987 XP_032753877;XP_032753878 dolichol-phosphate mannosyltransferase subunit 3 protein-coding 626022902 Clptm1 CLPTM1 regulator of GABA type A receptor forward trafficking ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); regulation of T cell differentiation in thymus (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); GABA-ergic synapse (ortholog) 2 170952701 170985533 + 22301074;30032202 116892502 MODEL JAAIVD010000001;XM_032894251 XP_032750142 cleft lip and palate transmembrane protein 1 protein-coding 626022920 Dnajb12 DnaJ heat shock protein family (Hsp40) member B12 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein folding (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) 18 25714865 25733278 + 30032202 116887133 MODEL JAAIVD010000013;XM_032888680;XM_032888681;XM_032888682 XP_032744571;XP_032744572;XP_032744573 dnaJ homolog subfamily B member 12 protein-coding 626022942 LOC116908099 olfactory receptor 24 8 14838412 14839353 - 22301074;30032202 116908099 MODEL JAAIVD010000027;XM_032911378 XP_032767269 protein-coding 626022945 Stkld1 serine/threonine kinase like domain containing 1 5 9703220 9721233 - 22301074;30032202 116901249 MODEL JAAIVD010000023;XM_032903002 XP_032758893 serine/threonine kinase-like domain-containing protein STKLD1 protein-coding 626022968 Hscb HscB mitochondrial iron-sulfur cluster cochaperone ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron-sulfur cluster assembly (ortholog); primitive erythrocyte differentiation (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH sideroblastic anemia 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 16 43504811 43514587 + 22301074;30032202 116885707 MODEL JAAIVD010000004;XM_032887013;XM_032887014;XM_032887015;XM_032887016;XR_004386037 XP_032742904;XP_032742905;XP_032742906;XP_032742907 iron-sulfur cluster co-chaperone protein HscB protein-coding 626022988 LOC116887672 nephrocan 18 29564701 29580091 - 22301074;30032202 116887672 MODEL JAAIVD010000013;XM_032889265;XM_032889266 XP_032745156;XP_032745157 protein-coding 626022998 LOC116907199 RNA guanine-N7 methyltransferase activating subunit-like 8 4077011 4078675 + 116907199 MODEL JAAIVD010000027 pseudo 626022999 LOC116911499 40S ribosomal protein S8-like 1 165080653 165092048 + 116911499 MODEL JAAIVD010000025 pseudo 626023000 LOC116895006 small nucleolar RNA SNORA48 2 119951023 119951166 - 116895006 MODEL JAAIVD010000001;XR_004387194 snorna 626023003 Gon4l gon-4 like ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ependymomas (ortholog); intellectual disability (ortholog); Li-Takada-Miyake syndrome (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64769186 64797679 - 22301074;30032202 116896672 MODEL JAAIVD010000012;XM_032898041;XM_032898042 XP_032753932;XP_032753933 GON-4-like protein protein-coding 626023031 LOC116910010 T-cell-specific guanine nucleotide triphosphate-binding protein 2-like 9 31534102 31547492 + 22301074;30032202 116910010 MODEL JAAIVD010000002;XM_032913795;XM_032913796 XP_032769686;XP_032769687 protein-coding 626023040 Timm44 translocase of inner mitochondrial membrane 44 ENCODES a protein that exhibits enzyme binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); intracellular protein transport (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH diabetic retinopathy (ortholog); Experimental Diabetes Mellitus (ortholog); Neointima (ortholog); FOUND IN fibrillar center (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) 16 2392950 2408724 - 22301074;30032202 116885361 MODEL JAAIVD010000004;XM_032886635 XP_032742526 mitochondrial import inner membrane translocase subunit TIM44 protein-coding 626023057 Isg20l2 interferon stimulated exonuclease gene 20 like 2 3 65618968 65628512 - 22301074;30032202 116896708 MODEL JAAIVD010000012;XM_032898123;XM_032898124 XP_032754014;XP_032754015 interferon-stimulated 20 kDa exonuclease-like 2 protein-coding 626023067 LOC116888006 influenza virus NS1A-binding protein homolog X 78684289 78686160 - 116888006 MODEL JAAIVD010000014 pseudo 626023068 LOC116906229 immunoglobulin heavy variable 7-4-1-like 7 121751847 121752284 - 116906229 MODEL JAAIVD010000026 pseudo 626023069 Pabpn1l PABPN1 like, cytoplasmic ENCODES a protein that exhibits poly(A) binding (ortholog); RNA binding (ortholog); INVOLVED IN maternal-to-zygotic transition of gene expression (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 17 42247583 42250811 - 22301074 116886553 MODEL JAAIVD010000011;XM_032888070 XP_032743961 embryonic polyadenylate-binding protein 2 protein-coding 626023079 Rars2 arginyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits arginine-tRNA ligase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH cerebellar hypoplasia (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 108093802 108134683 - 22301074;30032202 116902208 MODEL JAAIVD010000025;XM_032904608;XM_032904616 XP_032760499;XP_032760507 probable arginine--tRNA ligase, mitochondrial protein-coding 626023106 Etf1 eukaryotic translation termination factor 1 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); sequence-specific mRNA binding (ortholog); translation release factor activity (ortholog); INVOLVED IN protein methylation (ortholog); regulation of translational termination (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); nucleus (ortholog) 15 9431809 9460085 + 30032202 116884292 MODEL JAAIVD010000010;XM_032885390 XP_032741281 eukaryotic peptide chain release factor subunit 1 protein-coding 626023121 LOC116899916 small nucleolar RNA SNORA81 4 7901123 7901300 + 116899916 MODEL JAAIVD010000003;XR_004387888 snorna 626023124 Tjap1 tight junction associated protein 1 INVOLVED IN Golgi organization (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 4 83587694 83611834 + 30032202 116899117 MODEL JAAIVD010000003;XM_032900639 XP_032756530 tight junction-associated protein 1 protein-coding 626023139 LOC116913004 small nucleolar RNA SNORA17 11 49054177 49054310 - 116913004 MODEL JAAIVD010000006;XR_004389562 snorna 626023142 Naglu N-acetyl-alpha-glucosaminidase ENCODES a protein that exhibits alpha-N-acetylglucosaminidase activity (ortholog); iron ion sequestering activity (ortholog); INVOLVED IN adult behavior (ortholog); amyloid precursor protein metabolic process (ortholog); aorta development (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2V (ortholog); FOUND IN extracellular exosome (ortholog); lysosomal lumen (ortholog); vacuole (ortholog) 9 60364343 60371880 + 116908875 MODEL JAAIVD010000002;XM_032912320 XP_032768211 alpha-N-acetylglucosaminidase protein-coding 626023152 LOC116889415 EKC/KEOPS complex subunit LAGE3-like X 123822524 123823832 - 30032202 116889415 MODEL JAAIVD010000014;XM_032890517 XP_032746408 protein-coding 626023159 Grin2a glutamate ionotropic receptor NMDA type subunit 2A ENCODES a protein that exhibits ATPase binding (ortholog); calcium channel activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN action potential (ortholog); auditory behavior (ortholog); calcium ion transmembrane import into cytosol (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite membrane (ortholog) 9 12309204 12719272 + 22301074;30032202 116910235 MODEL JAAIVD010000002;XM_032914126 XP_032770017 glutamate receptor ionotropic, NMDA 2A protein-coding 626023177 LOC116910962 olfactory receptor 6C76-like 1 161771497 161792077 + 116910962 MODEL JAAIVD010000025 pseudo 626023178 LOC116887991 serine/threonine-protein kinase H1-like X 73022508 73023066 - 116887991 MODEL JAAIVD010000014 pseudo 626023179 LOC116883218 nucleophosmin-like 14 47127160 47128884 - 116883218 MODEL JAAIVD010000009 pseudo 626023180 Oxt oxytocin/neurophysin I prepropeptide ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); oxytocin receptor binding (ortholog); INVOLVED IN drinking behavior (ortholog); eating behavior (ortholog); female pregnancy (ortholog); PARTICIPATES IN oxytocin signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); amphetamine abuse (ortholog); anxiety disorder (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 5 110313803 110314580 + 22301074;30032202 116900635 MODEL JAAIVD010000023;XM_032902347 XP_032758238 oxytocin-neurophysin 1 protein-coding 626023187 Arrdc5 arrestin domain containing 5 INVOLVED IN spermatogenesis (ortholog); FOUND IN membrane (ortholog) 4 87684921 87691084 - 30032202 116898061 MODEL JAAIVD010000003;XM_032899457 XP_032755348 arrestin domain-containing protein 5 protein-coding 626023194 Slc2a9 solute carrier family 2 member 9 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); urate metabolic process (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); genetic disease (ortholog); gout (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); nuclear envelope (ortholog) 11 66733322 66843793 + 22301074;30032202 116912670 MODEL JAAIVD010000006;XM_032916787 XP_032772678 solute carrier family 2, facilitated glucose transporter member 9 protein-coding 626023210 Cda cytidine deaminase ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); nucleoside binding (ortholog); INVOLVED IN cellular response to external biotic stimulus (ortholog); UMP salvage (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog) 1 19853407 19880552 + 22301074;30032202 116893872 MODEL JAAIVD010000025;XM_032895599 XP_032751490 protein-coding 626023218 Supt20h SPT20 homolog, SAGA complex component INVOLVED IN positive regulation of gluconeogenesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN SAGA-type complex (ortholog) 3 99676188 99709341 - 30032202 116896869 MODEL JAAIVD010000012;XM_032898398;XM_032898399;XM_032898400;XM_032898401;XM_032898402;XM_032898403;XM_032898404;XM_032898405;XM_032898407;XM_032898408;XM_032898409;XM_032898410;XM_032898411;XM_032898412;XM_032898413 XP_032754289;XP_032754290;XP_032754291;XP_032754292;XP_032754293;XP_032754294;XP_032754295;XP_032754296;XP_032754298;XP_032754299;XP_032754300;XP_032754301;XP_032754302;XP_032754303;XP_032754304 transcription factor SPT20 homolog protein-coding 626023277 LOC116895430 ETS translocation variant 3-like protein 3 66001128 66012698 - 22301074;30032202 116895430 MODEL JAAIVD010000012;XM_032896707 XP_032752598 protein-coding 626023285 LOC116889742 60S ribosomal protein L7a-like 116889742 MODEL JAAIVD010000075 pseudo 626023286 LOC116904760 5S ribosomal RNA 6 144616557 144616675 + 116904760 MODEL JAAIVD010000024;XR_004388436 rrna 626023289 Tpd52 tumor protein D52 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Neoplasm Recurrence, Local (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog) 3 143061398 143140444 - 30032202 116897027 MODEL JAAIVD010000012;XM_032898641;XM_032898642;XM_032898643;XM_032898644;XM_032898645 XP_032754532;XP_032754533;XP_032754534;XP_032754535;XP_032754536 protein-coding 626023313 Gprin2 G protein regulated inducer of neurite outgrowth 2 13 9952309 9960695 - 30032202 116914903 MODEL JAAIVD010000008;XM_032919344 XP_032775235 G protein-regulated inducer of neurite outgrowth 2 protein-coding 626023319 Znf655 zinc finger protein 655 INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 16 8046172 8063543 - 22301074 116885936 MODEL JAAIVD010000004;XM_032887248;XM_032887250;XM_032887251 XP_032743139;XP_032743141;XP_032743142 protein-coding 626023338 LOC116889403 histidine triad nucleotide-binding protein 1-like X 96037042 96037428 - 116889403 MODEL JAAIVD010000014 pseudo 626023339 LOC116911029 zinc finger protein 431-like 1 215656980 215679547 - 30032202 116911029 MODEL JAAIVD010000025;XM_032914772;XM_032914778 XP_032770663;XP_032770669 protein-coding 626023350 Ensa endosulfine alpha ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN regulation of insulin secretion (ortholog); response to glucose (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); Spinal Cord Injuries (ortholog); FOUND IN cytoplasm (ortholog) 3 61641515 61648896 - 30032202 116896542 MODEL JAAIVD010000012;XM_032897731 XP_032753622 alpha-endosulfine protein-coding 626023358 LOC116911705 60S ribosomal protein L19-like 10 8671700 8672283 + 116911705 MODEL JAAIVD010000005 pseudo 626023359 LOC116887560 U1 small nuclear ribonucleoprotein C-like 18 23536384 23540901 - 116887560 MODEL JAAIVD010000013 pseudo 626023360 Gp1bb glycoprotein Ib platelet subunit beta ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); megakaryocyte development (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Bernard-Soulier syndrome (ortholog); carotid artery thrombosis (ortholog); congenital heart disease (ortholog); FOUND IN glycoprotein Ib-IX-V complex (ortholog) 4 3871731 3872949 - 116898675 MODEL JAAIVD010000003;XM_032899925 XP_032755816 platelet glycoprotein Ib beta chain protein-coding 626023365 LOC116896046 macrophage migration inhibitory factor-like 3 196990740 196991086 + 116896046 MODEL JAAIVD010000012 pseudo 626023366 LOC116914618 ezrin-like 13 78262367 78264437 + 116914618 MODEL JAAIVD010000008 pseudo 626023367 LOC116897864 40S ribosomal protein S2-like 4 21095015 21095924 - 116897864 MODEL JAAIVD010000003 pseudo 626023368 Serpina4 serpin family A member 4 PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH diabetic retinopathy (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) 7 115134343 115143552 + 30032202 116905875 MODEL JAAIVD010000026;XM_032908863 XP_032764754 kallistatin protein-coding 626023377 Dusp10 dual specificity phosphatase 10 ENCODES a protein that exhibits JUN kinase binding (ortholog); MAP kinase phosphatase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of epithelial cell migration (ortholog); negative regulation of epithelial cell proliferation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); Inflammation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 62227600 62264559 + 22301074;30032202 116911418 MODEL JAAIVD010000005;XM_032915379;XM_032915380 XP_032771270;XP_032771271 dual specificity protein phosphatase 10 protein-coding 626023388 LOC116900475 olfactory receptor 4C46-like 5 71518624 71519553 + 22301074 116900475 MODEL JAAIVD010000023;XM_032902211 XP_032758102 protein-coding 626023391 Hars2 histidyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits histidine-tRNA ligase activity (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH genetic disease (ortholog); Perrault syndrome (ortholog); Perrault syndrome 2 (ortholog); FOUND IN mitochondrion (ortholog) 15 7588732 7597546 - 22301074;30032202 116884285 MODEL JAAIVD010000010;XM_032885381 XP_032741272 probable histidine--tRNA ligase, mitochondrial protein-coding 626023407 LOC116892247 zinc finger protein OZF-like 2 160228725 160252433 - 30032202 116892247 MODEL JAAIVD010000001;XM_032893816;XM_032893817;XR_004386934 XP_032749707;XP_032749708 zinc finger protein 883-like protein-coding 626023422 Spic Spi-C transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 1 167734090 167741947 - 22301074;30032202 116889977 MODEL JAAIVD010000025;XM_032890770;XM_032890771 XP_032746661;XP_032746662 transcription factor Spi-C protein-coding 626023437 Axin2 axin 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); bone mineralization (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; endometrial cancer pathway; ASSOCIATED WITH Animal Disease Models (ortholog); anodontia (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2J (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 70186820 70216662 - 30032202 116908898 MODEL JAAIVD010000002;XM_032912351 XP_032768242 axin-2 protein-coding 626023452 LOC116885975 U4 spliceosomal RNA 16 38337709 38337849 - 116885975 MODEL JAAIVD010000004;XR_004386056 snrna 626023455 LOC116893448 ATP synthase subunit ATP5MPL, mitochondrial-like 2 177572461 177574147 + 116893448 MODEL JAAIVD010000001 pseudo 626023456 LOC116888016 E3 ubiquitin-protein ligase RING2-like X 80191787 80214617 - 30032202 116888016 MODEL JAAIVD010000014;XM_032889430 XP_032745321 protein-coding 626023461 Gdpd5 glycerophosphodiester phosphodiesterase domain containing 5 ENCODES a protein that exhibits glycerophosphocholine phosphodiesterase activity (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); negative regulation of Notch signaling pathway (ortholog); neuron projection development (ortholog); FOUND IN axon (ortholog); membrane (ortholog); neuronal cell body (ortholog) 2 97650949 97732117 + 22301074;30032202 116891722 MODEL JAAIVD010000001;XM_032893012;XM_032893013;XM_032893014;XM_032893015;XM_032893016 XP_032748903;XP_032748904;XP_032748905;XP_032748906;XP_032748907 glycerophosphodiester phosphodiesterase domain-containing protein 5 protein-coding 626023488 Sugt1 SGT1 assembly cochaperone of MIS12 kinetochore complex ENCODES a protein that exhibits lncRNA binding (ortholog); INVOLVED IN kinetochore assembly (ortholog); regulation of protein stability (ortholog); skeletal muscle satellite cell proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); kinetochore (ortholog) 12 44717347 44757479 - 30032202 116913662 MODEL JAAIVD010000007;XM_032917951 XP_032773842 SGT1 homolog, MIS12 kinetochore complex assembly cochaperone;protein SGT1 homolog protein-coding 626023505 LOC116887689 olfactory receptor 5V1-like 18 10330228 10331181 - 22301074 116887689 MODEL JAAIVD010000013;XM_032889283 XP_032745174 protein-coding 626023508 LOC116885113 small nucleolar RNA SNORA31 15 1133161 1133267 + 116885113 MODEL JAAIVD010000010;XR_004385978 snorna 626023511 LOC116893719 olfactory receptor 10W1-like 2 13663725 13664675 + 22301074 116893719 MODEL JAAIVD010000001;XM_032895434 XP_032751325 protein-coding 626023514 LOC116894760 proteasome activator complex subunit 3-like 2 178871496 178872717 + 116894760 MODEL JAAIVD010000001 pseudo 626023515 Mapkapk3 MAPK activated protein kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN macropinocytosis (ortholog); MAPK cascade (ortholog); response to cytokine (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH fundus dystrophy (ortholog); patterned macular dystrophy (ortholog); patterned macular dystrophy 3 (ortholog); FOUND IN nucleoplasm (ortholog) 8 98573738 98606834 - 22301074;30032202 116907513 MODEL JAAIVD010000027;XM_032910513;XM_032910514;XM_032910515 XP_032766404;XP_032766405;XP_032766406 MAP kinase-activated protein kinase 3 protein-coding 626023534 LOC116892730 olfactory receptor 5-like 2 179619052 179619993 - 22301074 116892730 MODEL JAAIVD010000001;XM_032894604 XP_032750495 protein-coding 626023537 Pik3cg phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit gamma ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to cAMP (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 7 45548144 45581376 - 30032202 116904961 MODEL JAAIVD010000026;XM_032907622 XP_032763513 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform protein-coding 626023552 Higd1a HIG1 hypoxia inducible domain family member 1A INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 113005097 113013829 - 30032202 116907981 MODEL JAAIVD010000027;XM_032911224;XM_032911226 XP_032767115;XP_032767117 HIG1 domain family member 1A, mitochondrial protein-coding 626023564 Mycn MYCN proto-oncogene, bHLH transcription factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); kinase binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); branching morphogenesis of an epithelial tube (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Gallbladder (ortholog); basal cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 32885579 32891417 - 22301074;30032202 116904884 MODEL JAAIVD010000026;XM_032907484;XM_032907485 XP_032763375;XP_032763376 N-myc proto-oncogene protein protein-coding 626023574 Timm9 translocase of inner mitochondrial membrane 9 ENCODES a protein that exhibits membrane insertase activity (ortholog); protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) 7 84757066 84770066 - 116905140 MODEL JAAIVD010000026;XM_032907902;XM_032907903;XM_032907904 XP_032763793;XP_032763794;XP_032763795 mitochondrial import inner membrane translocase subunit Tim9 protein-coding 626023586 LOC116884527 uncharacterized LOC116884527 15 64768061 64769662 - 116884527 MODEL JAAIVD010000010;XR_004385875 ncrna 626023590 LOC116898864 glyceraldehyde-3-phosphate dehydrogenase-like 1 42382263 42383278 - 116898864 MODEL JAAIVD010000025 pseudo 626023591 LOC116897554 small nucleolar RNA SNORA17 3 124778734 124778864 - 116897554 MODEL JAAIVD010000012;XR_004387567 snorna 626023594 LOC116911573 60S ribosomal protein L10-like 10 12896269 12896880 + 116911573 MODEL JAAIVD010000005 pseudo 626023595 Icoslg inducible T cell costimulator ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN positive regulation of interleukin-4 production (ortholog); T follicular helper cell differentiation (ortholog); ASSOCIATED WITH celiac disease (ortholog); combined immunodeficiency (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 18 1355978 1365544 + 116887308 MODEL JAAIVD010000013;XM_032888889;XM_032888890 XP_032744780;XP_032744781 ICOS ligand protein-coding 626023608 Nol10 nucleolar protein 10 FOUND IN nucleolus (ortholog) 7 37146214 37228250 + 22301074;30032202 116904900 MODEL JAAIVD010000026;XM_032907508 XP_032763399 protein-coding 626023633 Gpat4 glycerol-3-phosphate acyltransferase 4 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); diacylglycerol metabolic process (ortholog); fatty acid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 13 63219712 63254189 + 30032202 116914379 MODEL JAAIVD010000008;XM_032918584 XP_032774475 protein-coding 626023650 Atp6ap2 ATPase H+ transporting accessory protein 2 INVOLVED IN angiotensin maturation (ortholog); central nervous system maturation (ortholog); eye pigmentation (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH congenital disorder of glycosylation type IIr (ortholog); Craniofacial Abnormalities (ortholog); Fibrosis (ortholog); FOUND IN apical plasma membrane (ortholog); cell body (ortholog); endoplasmic reticulum membrane (ortholog) X 8765995 8785753 - 22301074;30032202 116888972 MODEL JAAIVD010000014;XM_032890197 XP_032746088 renin receptor protein-coding 626023661 LOC116900309 olfactory receptor 8H1-like 5 64079830 64080771 - 22301074;30032202 116900309 MODEL JAAIVD010000023;XM_032902065 XP_032757956 protein-coding 626023664 LOC116894455 uncharacterized LOC116894455 2 165315494 165317076 - 22301074;30032202 116894455 MODEL JAAIVD010000001;XM_032896163 XP_032752054 uncharacterized protein LOC116894455 protein-coding 626023672 LOC116899962 40S ribosomal protein S26-like 5 64964123 64964734 + 116899962 MODEL JAAIVD010000023 pseudo 626023673 Dusp11 dual specificity phosphatase 11 ENCODES a protein that exhibits phosphatase activity (ortholog); polynucleotide 5'-phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); FOUND IN fibrillar center (ortholog); intercellular bridge (ortholog); mitochondrion (ortholog) 6 60365306 60379210 + 22301074;30032202 116903559 MODEL JAAIVD010000024;XM_032906176 XP_032762067 RNA/RNP complex-1-interacting phosphatase protein-coding 626023686 C4H2orf92 chromosome 4 C2orf92 homolog 4 112925726 112956671 + 116898138 MODEL JAAIVD010000003;XM_032899514 XP_032755405 uncharacterized protein C2orf92 homolog protein-coding 626023697 Cers1 ceramide synthase 1 ENCODES a protein that exhibits N-acyltransferase activity (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to dithiothreitol (ortholog); cellular response to mycotoxin (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); Insulin Resistance (ortholog); obesity (ortholog); FOUND IN endoplasmic reticulum (ortholog) 13 12573036 12581617 + 22301074;30032202 116914252 MODEL JAAIVD010000008;XM_032918463 XP_032774354 protein-coding 626023707 Ube2s ubiquitin conjugating enzyme E2 S ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); exit from mitosis (ortholog); free ubiquitin chain polymerization (ortholog); FOUND IN anaphase-promoting complex (ortholog) 2 177392595 177396847 - 116892671 MODEL JAAIVD010000001;XM_032894499 XP_032750390 ubiquitin-conjugating enzyme E2 S protein-coding 626023715 LOC116906623 60S ribosomal protein L37-like 8 57727916 57728258 + 22301074;30032202 116906623 MODEL JAAIVD010000027;XM_032909382 XP_032765273 protein-coding 626023719 LOC116894589 vomeronasal type-1 receptor 4-like 2 180621465 180624757 + 22301074;30032202 116894589 MODEL JAAIVD010000001;XM_032896308 XP_032752199 protein-coding 626023725 LOC116913015 small nucleolar RNA U13 11 70664544 70664640 + 116913015 MODEL JAAIVD010000006 pseudo 626023726 Dpp6 dipeptidyl peptidase like 6 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); neuronal action potential (ortholog); positive regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 33 (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); neuronal cell body (ortholog) 6 155723156 156600570 + 22301074;30032202 116904229 MODEL JAAIVD010000024;XM_032907168;XM_032907169;XM_032907170;XM_032907171 XP_032763059;XP_032763060;XP_032763061;XP_032763062 dipeptidyl aminopeptidase-like protein 6 protein-coding 626023765 Dcstamp dendrocyte expressed seven transmembrane protein INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to macrophage colony-stimulating factor stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); endometriosis (ortholog); Paget's disease of bone (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) 1 213080134 213087202 + 22301074 116884982 MODEL JAAIVD010000025;XM_032886242 XP_032742133 dendritic cell-specific transmembrane protein protein-coding 626023770 Tmem250 transmembrane protein 250 INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of viral process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 14 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 10943936 10947678 + 116901278 MODEL JAAIVD010000023;XM_032903048;XM_032903049;XM_032903050 XP_032758939;XP_032758940;XP_032758941 protein-coding 626023781 Plcd4 phospholipase C delta 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN acrosome reaction (ortholog); small GTPase-mediated signal transduction (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); plasma membrane (ortholog) 4 147981488 148006326 + 22301074;30032202 116899507 MODEL JAAIVD010000003;XM_032901360 XP_032757251 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 protein-coding 626023803 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41791552 41791623 - 116884163 MODEL JAAIVD010000009 trna 626023804 LOC116895085 small nucleolar RNA SNORD88 2 197920567 197920660 - 116895085 MODEL JAAIVD010000001;XR_004387252 snorna 626023807 Chp2 calcineurin like EF-hand protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 2 79616292 79619308 - 22301074 116891554 MODEL JAAIVD010000001;XM_032892725 XP_032748616 calcineurin B homologous protein 2 protein-coding 626023818 Taf1a TATA-box binding protein associated factor, RNA polymerase I subunit A PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); familial restrictive cardiomyopathy 6 (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleoplasm (ortholog); RNA polymerase transcription factor SL1 complex (ortholog) 10 61645900 61663354 + 22301074 116911047 MODEL JAAIVD010000005;XM_032914796 XP_032770687 TATA box-binding protein-associated factor RNA polymerase I subunit A protein-coding 626023832 En2 engrailed homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); dopaminergic neuron differentiation (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Parkinsonism (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 156968717 156974935 + 22301074;30032202 116904234 MODEL JAAIVD010000024;XM_032907178 XP_032763069 homeobox protein engrailed-2 protein-coding 626023838 Fhod3 formin homology 2 domain containing 3 INVOLVED IN actin filament network formation (ortholog); cardiac myofibril assembly (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); genetic disease (ortholog); FOUND IN sarcomere (ortholog); striated muscle thin filament (ortholog) 15 18746910 18982852 - 30032202 116884457 MODEL JAAIVD010000010;XM_032885556 XP_032741447 FH1/FH2 domain-containing protein 3 protein-coding 626023864 LOC116910734 olfactory receptor 6C3-like 1 161705192 161706063 + 116910734 MODEL JAAIVD010000025 pseudo 626023865 Nrep neuronal regeneration related protein INVOLVED IN axon regeneration (ortholog); regulation of neuron differentiation (ortholog); regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 15 10873240 10900470 + 30032202 116884462 MODEL JAAIVD010000010;XM_032885563;XM_032885564;XM_032885565 XP_032741454;XP_032741455;XP_032741456 neuronal regeneration-related protein protein-coding 626023880 LOC116895486 activated RNA polymerase II transcriptional coactivator p15-like 3 95446265 95446885 + 116895486 MODEL JAAIVD010000012 pseudo 626023881 Adamtsl4 ADAMTS like 4 ENCODES a protein that exhibits identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN epithelial cell development (ortholog); extracellular matrix organization (ortholog); pigment cell development (ortholog); ASSOCIATED WITH autosomal recessive isolated ectopia lentis 2 (ortholog); Craniosynostosis with Ectopia Lentis (ortholog); Ectopia Lentis (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 3 61588957 61600511 + 30032202 116896540 MODEL JAAIVD010000012;XM_032897729 XP_032753620 ADAMTS-like protein 4 protein-coding 626023903 LOC116888261 nicotinate-nucleotide pyrophosphorylase [carboxylating]-like X 5627500 5628362 - 116888261 MODEL JAAIVD010000014 pseudo 626023904 Apob apolipoprotein B ENCODES a protein that exhibits cholesterol transfer activity (ortholog); heparin binding (ortholog); lipase binding (ortholog); INVOLVED IN artery morphogenesis (ortholog); cellular response to amyloid-beta (ortholog); cellular response to lipoprotein particle stimulus (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); arteriosclerosis (ortholog); autosomal recessive hypercholesterolemia (ortholog); FOUND IN chylomicron (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 28340169 28378753 + 30032202 116906294 MODEL JAAIVD010000026;XM_032909188 XP_032765079 apolipoprotein B-100 protein-coding 626023937 Igfbp5 insulin like growth factor binding protein 5 ENCODES a protein that exhibits fibronectin binding (ortholog); insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cAMP (ortholog); female pregnancy (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congenital diaphragmatic hernia (ortholog); Coronary Disease (ortholog); FOUND IN insulin-like growth factor ternary complex (ortholog) 4 146373051 146390057 - 22301074;30032202 116899490 MODEL JAAIVD010000003;XM_032901323 XP_032757214 insulin-like growth factor-binding protein 5 protein-coding 626023945 C1qc complement C1q C chain ENCODES a protein that exhibits IgG binding (ortholog); IgM binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN complement activation, classical pathway (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of macrophage differentiation (ortholog); ASSOCIATED WITH C1q Deficiency (ortholog); C1q Deficiency 3 (ortholog); COVID-19 (ortholog); FOUND IN complement component C1 complex (ortholog); complement component C1q complex (ortholog); extracellular region (ortholog) 1 21338909 21342277 + 22301074 116894217 MODEL JAAIVD010000025;XM_032895932 XP_032751823 complement C1q subcomponent subunit C protein-coding 626023952 LOC116901360 uncharacterized LOC116901360 5 15482688 15484006 + 116901360 MODEL JAAIVD010000023;XR_004387982 ncrna 626023956 Kcnip4 potassium voltage-gated channel interacting protein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendrite (ortholog) 11 57487548 57583511 + 22301074;30032202 116911947 MODEL JAAIVD010000006;XM_032915860 XP_032771751 Kv channel-interacting protein 4 protein-coding 626023967 LOC116890156 meiosis inhibitor protein 1 1 251822346 251857718 + 30032202 116890156 MODEL JAAIVD010000025;XM_032890889 XP_032746780 protein-coding 626023993 Cped1 cadherin like and PC-esterase domain containing 1 ASSOCIATED WITH Creutzfeldt-Jakob disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 116916748 117186480 - 116902935 MODEL JAAIVD010000024;XM_032905260 XP_032761151 cadherin-like and PC-esterase domain-containing protein 1 protein-coding 626024019 Cnot6 CCR4-NOT transcription complex subunit 6 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); RNA exonuclease activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); nuclear-transcribed mRNA poly(A) tail shortening (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog) 9 32287509 32328212 - 22301074;30032202 116910628 MODEL JAAIVD010000002;XM_032914577;XM_032914578;XM_032914579;XM_032914580 XP_032770468;XP_032770469;XP_032770470;XP_032770471 protein-coding 626024043 LOC116884639 ubiquitin-like protein 5 15 67028997 67029388 + 22301074;30032202 116884639 MODEL JAAIVD010000010;XM_032885779 XP_032741670 protein-coding 626024048 Tra2b transformer 2 beta homolog ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); poly-purine tract binding (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cerebral cortex regionalization (ortholog); embryonic brain development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); macular degeneration (ortholog); FOUND IN male germ cell nucleus (ortholog); nuclear inner membrane (ortholog); nucleoplasm (ortholog) 4 6907184 6926436 - 22301074;30032202 116898717 MODEL JAAIVD010000003;XM_032900009;XM_032900010;XM_032900011 XP_032755900;XP_032755901;XP_032755902 transformer-2 protein homolog beta protein-coding 626024068 LOC116905168 transmembrane protein 183-like 7 88226386 88227469 - 22301074;30032202 116905168 MODEL JAAIVD010000026;XM_032907943 XP_032763834 protein-coding 626024072 Ace2 angiotensin converting enzyme 2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN angiotensin maturation (ortholog); angiotensin-mediated drinking behavior (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) X 24732622 24778425 + 22301074;30032202 116889074 MODEL JAAIVD010000014;XM_032890254 XP_032746145 angiotensin I converting enzyme 2;angiotensin-converting enzyme 2 protein-coding 626024093 Siah1 siah E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); male meiosis I (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH BURATTI-HAREL SYNDROME (ortholog); genetic disease (ortholog); Spinal Cord Injuries (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytosol (ortholog); early endosome (ortholog) 17 13096909 13120848 + 22301074;30032202 116886138 MODEL JAAIVD010000011;XM_032887488;XM_032887489;XM_032887490 XP_032743379;XP_032743380;XP_032743381 E3 ubiquitin-protein ligase SIAH1 protein-coding 626024106 LOC116897879 40S ribosomal protein S26-like 4 15304928 15306020 - 22301074;30032202 116897879 MODEL JAAIVD010000003;XM_032899284 XP_032755175 protein-coding 626024111 Cdh18 cadherin 18 ASSOCIATED WITH speech-language disorder-1 (ortholog) 3 158728869 158971422 - 22301074;30032202 116897104 MODEL JAAIVD010000012;XM_032898746 XP_032754637 cadherin-18 protein-coding 626024125 LOC116890305 U4 spliceosomal RNA 1 209760972 209761130 + 116890305 MODEL JAAIVD010000025 pseudo 626024126 Afg2a AAA ATPase AFG2A ENCODES a protein that exhibits preribosome binding (ortholog); INVOLVED IN brain development (ortholog); ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); neurodevelopmental disorder with hearing loss, seizures, and brain abnormalities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 116408920 116613198 - 22301074;30032202 116896916 MODEL JAAIVD010000012;XM_032898480;XM_032898481;XM_032898482;XM_032898483 XP_032754371;XP_032754372;XP_032754373;XP_032754374 Spata5 AFG2 AAA ATPase homolog A;ATPase family protein 2 homolog;spermatogenesis associated 5 protein-coding 626024157 LOC116903195 C-type lectin domain family 2 member D3-like 6 18832668 18842347 + 30032202 116903195 MODEL JAAIVD010000024;XM_032905571;XM_032905572 XP_032761462;XP_032761463 protein-coding 626024172 LOC116905704 uncharacterized LOC116905704 1 155165444 155167858 + 116905704 MODEL JAAIVD010000025;XR_004388564 ncrna 626024176 LOC116888786 tRNA (uracil(54)-C(5))-methyltransferase homolog X 87328316 87333178 + 116888786 MODEL JAAIVD010000014 pseudo 626024177 Atp13a1 ATPase 13A1 ENCODES a protein that exhibits membrane protein dislocase activity (ortholog); INVOLVED IN extraction of mislocalized protein from ER membrane (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 12052129 12069555 + 22301074;30032202 116914515 MODEL JAAIVD010000008;XM_032918846 XP_032774737 manganese-transporting ATPase 13A1 protein-coding 626024207 LOC116897607 small nucleolar RNA SNORA17 3 80475382 80475498 - 116897607 MODEL JAAIVD010000012 pseudo 626024208 Ptpro protein tyrosine phosphatase receptor type O ENCODES a protein that exhibits cadherin binding (ortholog); protein homodimerization activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN axon guidance (ortholog); cell morphogenesis (ortholog); glomerulus development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); dendritic spine (ortholog); GABA-ergic synapse (ortholog) 6 11973388 12179315 - 22301074;30032202 116903146 MODEL JAAIVD010000024;XM_032905510 XP_032761401 receptor-type tyrosine-protein phosphatase O protein-coding 626024239 Grifin galectin-related inter-fiber protein 16 12638418 12642731 + 22301074 116885876 MODEL JAAIVD010000004;XM_032887200 XP_032743091 protein-coding 626024248 Vti1a vesicle transport through interaction with t-SNAREs 1A ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN autophagy (ortholog); endocytic recycling (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Colorectal Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN autophagosome (ortholog); clathrin-coated vesicle (ortholog); Golgi apparatus (ortholog) 2 60551477 60844242 - 22301074;30032202 116891341 MODEL JAAIVD010000001;XM_032892326;XM_032892327;XM_032892328;XM_032892329;XM_032892330 XP_032748217;XP_032748218;XP_032748219;XP_032748220;XP_032748221 vesicle transport through interaction with t-SNAREs homolog 1A protein-coding 626024278 LOC116885858 ribosome biogenesis regulatory protein homolog 16 3229760 3230318 - 116885858 MODEL JAAIVD010000004 pseudo 626024279 Pom121l2 POM121 transmembrane nucleoporin like 2 14 41706742 41713935 - 30032202 116883881 MODEL JAAIVD010000009;XM_032885146;XM_032885147 XP_032741037;XP_032741038 POM121-like protein 2 protein-coding 626024289 Orc6 origin recognition complex subunit 6 INVOLVED IN DNA replication initiation (ortholog); DNA-templated DNA replication (ortholog); ASSOCIATED WITH genetic disease (ortholog); Meier-Gorlin syndrome (ortholog); Meier-Gorlin syndrome 3 (ortholog); FOUND IN fibrillar center (ortholog); nuclear origin of replication recognition complex (ortholog); nucleoplasm (ortholog) 17 14450033 14458041 - 22301074;30032202 116886043 MODEL JAAIVD010000011;XM_032887348 XP_032743239 protein-coding 626024300 Lrrfip1 LRR binding FLII interacting protein 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); myoepithelioma (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 4 163001199 163129940 + 30032202 116899633 MODEL JAAIVD010000003;XM_032901607;XM_032901608;XM_032901609;XM_032901610;XM_032901611;XM_032901612;XM_032901613;XM_032901614;XM_032901616;XM_032901617;XM_032901618;XM_032901619;XM_032901620;XM_032901621 XP_032757498;XP_032757499;XP_032757500;XP_032757501;XP_032757502;XP_032757503;XP_032757504;XP_032757505;XP_032757507;XP_032757508;XP_032757509;XP_032757510;XP_032757511;XP_032757512 leucine-rich repeat flightless-interacting protein 1 protein-coding 626024354 Cdca7l cell division cycle associated 7 like INVOLVED IN positive regulation of cell population proliferation (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 7 118225658 118264101 - 30032202 116905396 MODEL JAAIVD010000026;XM_032908350 XP_032764241 cell division cycle-associated 7-like protein protein-coding 626024368 LOC116910220 nuclear receptor coactivator 4-like 9 8887587 8889066 - 116910220 MODEL JAAIVD010000002 pseudo 626024369 Tmub2 transmembrane and ubiquitin like domain containing 2 9 61577778 61582037 + 22301074 116908617 MODEL JAAIVD010000002;XM_032911852;XM_032911853;XM_032911854 XP_032767743;XP_032767744;XP_032767745 transmembrane and ubiquitin-like domain-containing protein 2 protein-coding 626024383 LOC116895115 U12 minor spliceosomal RNA 2 15013883 15014032 - 116895115 MODEL JAAIVD010000001;XR_004387263 snrna 626024386 Usp6nl USP6 N-terminal like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi organization (ortholog); plasma membrane to endosome transport (ortholog); positive regulation of GTPase activity (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); plasma membrane (ortholog) 14 12684218 12781385 + 116915233 MODEL JAAIVD010000009;XM_032919624 XP_032775515 USP6 N-terminal-like protein protein-coding 626024404 LOC116909053 40S ribosomal protein S26-like 9 51455170 51457128 + 116909053 MODEL JAAIVD010000002 pseudo 626024405 Gimd1 GIMAP family P-loop NTPase domain containing 1 3 26264745 26299539 - 22301074 116895315 MODEL JAAIVD010000012;XM_032896625 XP_032752516 GTPase IMAP family member GIMD1 protein-coding 626024412 LOC116908023 Golgi-associated PDZ and coiled-coil motif-containing protein-like 8 20173993 20215758 - 30032202 116908023 MODEL JAAIVD010000027;XM_032911285 XP_032767176 protein-coding 626024424 LOC116890459 5.8S ribosomal RNA 1 152999120 152999272 - 116890459 MODEL JAAIVD010000025;XR_004386651 rrna 626024427 Tsc22d2 TSC22 domain family member 2 INVOLVED IN negative regulation of cell cycle (ortholog); response to osmotic stress (ortholog); ASSOCIATED WITH keratoconus (ortholog) 3 96953602 96999369 + 22301074 116896850 MODEL JAAIVD010000012;XM_032898355;XM_032898357;XM_032898358 XP_032754246;XP_032754248;XP_032754249 TSC22 domain family protein 2 protein-coding 626024441 Nars2 asparaginyl-tRNA synthetase 2, mitochondrial ASSOCIATED WITH autosomal recessive nonsyndromic deafness 94 (ortholog); combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 24 (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 95340007 95442767 + 22301074;30032202 116891689 MODEL JAAIVD010000001;XM_032892956 XP_032748847 probable asparagine--tRNA ligase, mitochondrial protein-coding 626024459 LOC116912166 uncharacterized LOC116912166 11 7878288 7891336 - 116912166 MODEL JAAIVD010000006;XR_004389428 ncrna 626024463 Bkgd beta-keto-L-gulonate decarboxylase ENCODES a protein that exhibits hydrolase activity, acting on ester bonds (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA damage response (ortholog); regulation of DNA repair (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 8 11079660 11098331 - 22301074;30032202 116906943 MODEL JAAIVD010000027;XM_032909867 XP_032765758 C8H11orf54 chromosome 8 C11orf54 homolog;ester hydrolase C11orf54 homolog protein-coding 626024475 LOC116913994 transcription initiation factor IIA subunit 2-like 12 73680677 73681332 + 116913994 MODEL JAAIVD010000007 pseudo 626024476 Epm2a EPM2A glucan phosphatase, laforin ENCODES a protein that exhibits carbohydrate binding (ortholog); carbohydrate phosphatase activity (ortholog); glycogen binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); cataract (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog) 2 225773934 225887386 - 22301074;30032202 116893017 MODEL JAAIVD010000001;XM_032894979 XP_032750870 laforin protein-coding 626024484 Pla2g4a phospholipase A2 group IVA ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipase A2 activity (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); arachidonate secretion (ortholog); cellular response to antibiotic (ortholog); PARTICIPATES IN cyclooxygenase mediated pathway of arachidonic acid metabolism; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); amyotrophic lateral sclerosis (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 10 29266171 29407196 - 22301074;30032202 116911497 MODEL JAAIVD010000005;XM_032915481;XM_032915482 XP_032771372;XP_032771373 cytosolic phospholipase A2 protein-coding 626024511 LOC116887867 interleukin-1 receptor accessory protein-like 1 X 46512168 46945173 + 30032202 116887867 MODEL JAAIVD010000014;XM_032889362 XP_032745253 protein-coding 626024519 Zzz3 zinc finger ZZ-type containing 3 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN chromatin organization (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH pancreatic ductal carcinoma (ortholog); FOUND IN ATAC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 9165270 9200055 - 22301074 116896151 MODEL JAAIVD010000012;XM_032897136 XP_032753027 ZZ-type zinc finger-containing protein 3 protein-coding 626024534 LOC116896085 heat shock protein HSP 90-alpha-like 3 215059132 215062618 - 22301074;30032202 116896085 MODEL JAAIVD010000012;XM_032897063 XP_032752954 protein-coding 626024538 LOC116901056 sodium channel protein type 9 subunit alpha-like 5 139141666 139147546 - 116901056 MODEL JAAIVD010000023 pseudo 626024539 LOC116897242 baculoviral IAP repeat-containing protein 1b-like 3 196453210 196459737 + 30032202 116897242 MODEL JAAIVD010000012;XM_032898973 XP_032754864 protein-coding 626024547 LOC116895862 homeobox protein TGIF1-like 3 94786375 94787148 + 116895862 MODEL JAAIVD010000012 pseudo 626024548 Clec4g C-type lectin domain family 4 member G ENCODES a protein that exhibits carbohydrate derivative binding (ortholog); D-mannose binding (ortholog); fructose binding (ortholog); INVOLVED IN negative regulation of alpha-beta T cell proliferation (ortholog); negative regulation of immature T cell proliferation in thymus (ortholog); negative regulation of T cell mediated immunity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 16 1641745 1646187 - 30032202 116885796 MODEL JAAIVD010000004;XM_032887129 XP_032743020 protein-coding 626024560 LOC116888040 heat shock protein HSP 90-beta-like X 85871028 85872835 + 116888040 MODEL JAAIVD010000014 pseudo 626024561 Lrrc32 leucine rich repeat containing 32 ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN establishment of protein localization to extracellular region (ortholog); negative regulation of activated T cell proliferation (ortholog); negative regulation of cytokine production (ortholog); ASSOCIATED WITH Cleft Palate, Proliferative Retinopathy, and Developmental Delay (ortholog); Developmental Disabilities (ortholog); FOUND IN cell surface (ortholog); nucleoplasm (ortholog) 2 96762633 96773703 + 22301074;30032202 116893952 MODEL JAAIVD010000001;XM_032895669;XM_032895670 XP_032751560;XP_032751561 transforming growth factor beta activator LRRC32 protein-coding 626024570 Esco1 establishment of sister chromatid cohesion N-acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine acetylation (ortholog); post-translational protein acetylation (ortholog); regulation of DNA replication (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog) 15 33506899 33558662 + 30032202 116884251 MODEL JAAIVD010000010;XM_032885333 XP_032741224 N-acetyltransferase ESCO1 protein-coding 626024585 LOC116904672 small nucleolar RNA SNORA70 6 16838284 16838417 + 116904672 MODEL JAAIVD010000024;XR_004388372 snorna 626024588 Lhx5 LIM homeobox 5 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell proliferation in forebrain (ortholog); cell-cell signaling (ortholog); cerebellar Purkinje cell differentiation (ortholog) 16 33390443 33399395 - 22301074;30032202 116885390 MODEL JAAIVD010000004;XM_032886669 XP_032742560 LIM/homeobox protein Lhx5 protein-coding 626024597 LOC116900959 SH3 domain-binding protein 5-like 5 97670609 97678526 + 116900959 MODEL JAAIVD010000023 pseudo 626024598 Bacc1 BPTF associated chromatin complex component 1 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytosol (ortholog); MLL1 complex (ortholog); nucleoplasm (ortholog) 9 49837688 49840483 - 30032202 116909462 MODEL JAAIVD010000002;XM_032913046;XM_032913047;XM_032913048;XM_032913049;XM_032913050;XM_032913051;XM_032913053 XP_032768937;XP_032768938;XP_032768939;XP_032768940;XP_032768941;XP_032768942;XP_032768944 C9H17orf49 chromatin complexes subunit BAP18;chromosome 9 C17orf49 homolog protein-coding 626024618 LOC116892831 mas-related G-protein coupled receptor member H 2 191607674 191608639 + 22301074;30032202 116892831 MODEL JAAIVD010000001;XM_032894719 XP_032750610 protein-coding 626024621 LOC116895899 arylsulfatase E-like 3 117793163 117801316 - 30032202 116895899 MODEL JAAIVD010000012;XM_032896984 XP_032752875 protein-coding 626024637 Arhgap25 Rho GTPase activating protein 25 INVOLVED IN actin filament organization (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); phagocytosis, engulfment (ortholog); FOUND IN phagocytic cup (ortholog) 6 58794192 58869820 + 22301074;30032202 116903539 MODEL JAAIVD010000024;XM_032906153 XP_032762044 rho GTPase-activating protein 25 protein-coding 626024652 LOC116887990 interferon alpha-1-like 1 65493655 65494233 - 22301074;30032202 116887990 MODEL JAAIVD010000025;XM_032889422 XP_032745313 protein-coding 626024655 LOC116884499 nucleotide exchange factor SIL1-like 15 9053084 9088205 + 116884499 MODEL JAAIVD010000010;XM_032885628 XP_032741519 protein-coding 626024663 LOC116889579 U6 spliceosomal RNA X 127745036 127745142 - 116889579 MODEL JAAIVD010000014;XR_004386495 snrna 626024666 Pelo pelota mRNA surveillance and ribosome rescue factor ENCODES a protein that exhibits nucleoside-triphosphatase regulator activity (ortholog); ribosome binding (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN chromosome organization (ortholog); endoderm development (ortholog); inner cell mass cell proliferation (ortholog); PARTICIPATES IN translation termination pathway; FOUND IN cytosolic ribosome (ortholog); Dom34-Hbs1 complex (ortholog) 3 181631936 181634177 + 22301074;30032202 116897177 MODEL JAAIVD010000012;XM_032898862 XP_032754753 protein pelota homolog protein-coding 626024672 LOC116897821 receptor-transporting protein 1 4 8236960 8239495 + 30032202 116897821 MODEL JAAIVD010000003;XM_032899236 XP_032755127 protein-coding 626024678 Snx19 sorting nexin 19 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN chondrocyte differentiation (ortholog); dense core granule maturation (ortholog); establishment of localization in cell (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog) 8 26245228 26279882 + 22301074;30032202 116906558 MODEL JAAIVD010000027;XM_032909272 XP_032765163 sorting nexin-19 protein-coding 626024692 LOC116903216 uncharacterized LOC116903216 6 19324518 19334250 + 116903216 MODEL JAAIVD010000024;XR_004388262 ncrna 626024696 LOC116898767 replication protein A 14 kDa subunit 4 17043117 17043741 + 22301074;30032202 116898767 MODEL JAAIVD010000003;XM_032900100 XP_032755991 protein-coding 626024701 Ddx27 DEAD-box helicase 27 INVOLVED IN rRNA processing (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog) 5 150941832 150961031 - 22301074 116902319 MODEL JAAIVD010000023;XM_032904765;XM_032904767 XP_032760656;XP_032760658 probable ATP-dependent RNA helicase DDX27 protein-coding 626024729 LOC116904873 tetratricopeptide repeat protein 39B-like 7 12859016 12867502 - 22301074;30032202 116904873 MODEL JAAIVD010000026;XM_032907471 XP_032763362 protein-coding 626024735 Rin2 Ras and Rab interactor 2 INVOLVED IN positive regulation of endothelial cell migration (ortholog); positive regulation of endothelial cell-matrix adhesion via fibronectin (ortholog); positive regulation of vasculogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Macrocephaly, Alopecia, Cutis Laxa, and Scoliosis (ortholog) 5 125397527 125524191 + 22301074;30032202 116902055 MODEL JAAIVD010000023;XM_032904341;XM_032904342;XM_032904343;XM_032904344;XM_032904345 XP_032760232;XP_032760233;XP_032760234;XP_032760235;XP_032760236 protein-coding 626024769 Atf5 activating transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); circadian rhythm (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog); Huntington's disease (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 154727544 154731690 + 30032202 116892194 MODEL JAAIVD010000001;XM_032893725 XP_032749616 cyclic AMP-dependent transcription factor ATF-5 protein-coding 626024776 Cry2 cryptochrome circadian regulator 2 ENCODES a protein that exhibits damaged DNA binding (ortholog); deoxyribodipyrimidine photo-lyase activity (ortholog); DNA (6-4) photolyase activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); chronic myeloid leukemia (ortholog); FOUND IN Cry-Per complex (ortholog); cytosol (ortholog); extracellular region (ortholog) 5 66587706 66616230 - 30032202 116901644 MODEL JAAIVD010000023;XM_032903745 XP_032759636 cryptochrome-2 protein-coding 626024792 Fam32a family with sequence similarity 32 member A FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 13 14055769 14059225 + 30032202 116914666 MODEL JAAIVD010000008;XM_032919071 XP_032774962 protein FAM32A protein-coding 626024800 Tmeff1 transmembrane protein with EGF like and two follistatin like domains 1 ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); symbiont entry into host cell (ortholog); FOUND IN plasma membrane (ortholog) 1 101653658 101738930 + 22301074 116902101 MODEL JAAIVD010000025;XM_032904408 XP_032760299 tomoregulin-1 protein-coding 626024814 Ube3b ubiquitin protein ligase E3B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Kaufman oculocerebrofacial syndrome (ortholog); Ohdo syndrome, SBBYS variant (ortholog); FOUND IN glutamatergic synapse (ortholog); mitochondrion (ortholog); postsynapse (ortholog) 16 39533937 39580504 - 22301074;30032202 116885963 MODEL JAAIVD010000004;XM_032887299 XP_032743190 ubiquitin-protein ligase E3B protein-coding 626024846 Becn2 beclin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagy (ortholog); endosome to lysosome transport (ortholog); G protein-coupled receptor catabolic process (ortholog) 10 54431637 54432893 + 30032202 116911101 MODEL JAAIVD010000005;XM_032914935 XP_032770826 beclin-2 protein-coding 626024849 Creld1 CRELD disulfide isomerase 1 ASSOCIATED WITH Atrioventricular Septal Defect 2 (ortholog); Congenital Heart Defects, Multiple Types, 4 (ortholog); congenital heart disease (ortholog); FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 6 33041488 33052018 - 22301074 116903408 MODEL JAAIVD010000024;XM_032905922;XM_032905923;XM_032905924 XP_032761813;XP_032761814;XP_032761815 cysteine rich with EGF like domains 1;protein disulfide isomerase CRELD1 protein-coding 626024871 LOC116907101 uncharacterized LOC116907101 8 31876225 31898179 - 116907101 MODEL JAAIVD010000027;XR_004388805 ncrna 626024876 LOC116896035 60S ribosomal protein L29-like 3 190295910 190328085 + 22301074;30032202 116896035 MODEL JAAIVD010000012;XM_032897040 XP_032752931 protein-coding 626024881 Litaf lipopolysaccharide induced TNF factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN cytoplasmic side of early endosome membrane (ortholog); cytoplasmic side of late endosome membrane (ortholog); cytoplasmic side of lysosomal membrane (ortholog) 9 11349086 11386235 + 30032202 116909153 MODEL JAAIVD010000002;XM_032912638 XP_032768529 lipopolysaccharide-induced tumor necrosis factor-alpha factor protein-coding 626024889 Amer2 APC membrane recruitment protein 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 12 64046210 64049302 - 30032202 116913741 MODEL JAAIVD010000007;XM_032918045;XM_032918046 XP_032773936;XP_032773937 protein-coding 626024897 Cracr2a calcium release activated channel regulator 2A ENCODES a protein that exhibits calcium ion binding (ortholog); G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); endosomal transport (ortholog); intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); immunological synapse (ortholog) 6 20237396 20325393 - 22301074 116903233 MODEL JAAIVD010000024;XM_032905609 XP_032761500 EF-hand calcium-binding domain-containing protein 4B protein-coding 626024919 LOC116898120 solute carrier family 25 member 33-like 1 24588696 24589487 - 116898120 MODEL JAAIVD010000025 pseudo 626024920 LOC116913593 60S ribosomal protein L9-like 12 71700956 71701533 - 116913593 MODEL JAAIVD010000007 pseudo 626024921 LOC116885989 U6 spliceosomal RNA 16 27396648 27396750 + 116885989 MODEL JAAIVD010000004;XR_004386065 snrna 626024924 LOC116883403 uncharacterized LOC116883403 14 28567840 28570015 + 116883403 MODEL JAAIVD010000009;XR_004385761 ncrna 626024929 Wnt7b Wnt family member 7B ENCODES a protein that exhibits chemoattractant activity involved in axon guidance (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN anatomical structure regression (ortholog); angiogenesis (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH breast cancer (ortholog); breast fibroadenoma (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 1 254891098 254934344 - 22301074;30032202 116914636 MODEL JAAIVD010000025;XM_032919031;XM_032919039 XP_032774922;XP_032774930 protein Wnt-7b protein-coding 626024940 Fkrp fukutin related protein ENCODES a protein that exhibits dystroglycan binding (ortholog); identical protein binding (ortholog); laminin binding (ortholog); INVOLVED IN adult walking behavior (ortholog); basement membrane organization (ortholog); bone mineralization (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 3 (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2I (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 2 172276410 172283825 + 30032202 116892574 MODEL JAAIVD010000001;XM_032894353;XM_032894354 XP_032750244;XP_032750245 fukutin-related protein protein-coding 626024951 LOC116893522 ubiquitin-conjugating enzyme E2 N-like 2 196753444 196755787 + 116893522 MODEL JAAIVD010000001 pseudo 626024952 LOC116889558 U2 spliceosomal RNA X 3842558 3842670 - 116889558 MODEL JAAIVD010000014 pseudo 626024953 Sptbn4 spectrin beta, non-erythrocytic 4 ENCODES a protein that exhibits actin binding (ortholog); ankyrin binding (ortholog); phosphatase binding (ortholog); INVOLVED IN adult behavior (ortholog); adult walking behavior (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Congenital Myopathy with Neuropathy and Deafness (ortholog); Contracture (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); axon initial segment (ortholog) 2 168497782 168589116 + 22301074;30032202 116892431 MODEL JAAIVD010000001;XM_032894116;XM_032894117;XM_032894118;XM_032894120;XM_032894121 XP_032750007;XP_032750008;XP_032750009;XP_032750011;XP_032750012 spectrin beta chain, non-erythrocytic 4 protein-coding 626025007 Mdh2 malate dehydrogenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); L-malate dehydrogenase (NAD+) activity (ortholog); L-malate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN aerobic respiration (ortholog); gluconeogenesis (ortholog); malate metabolic process (ortholog); PARTICIPATES IN citric acid cycle pathway; fructose-1,6-bisphosphatase deficiency pathway; fumaric aciduria pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain disease (ortholog); brain ischemia (ortholog); FOUND IN membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 16 18233650 18246719 - 22301074;30032202 116885278 MODEL JAAIVD010000004;XM_032886508 XP_032742399 malate dehydrogenase, mitochondrial protein-coding 626025020 Tada1 transcriptional adaptor 1 ENCODES a protein that exhibits transcription coactivator activity (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytosol (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog) 10 45471643 45485897 + 30032202 116910863 MODEL JAAIVD010000005;XM_032914624 XP_032770515 transcriptional adapter 1 protein-coding 626025032 Heatr9 HEAT repeat containing 9 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); response to cytokine (ortholog); response to virus (ortholog) 9 87168030 87178113 + 116910379 MODEL JAAIVD010000002;XM_032914225 XP_032770116 protein HEATR9 protein-coding 626025050 Barx2 BARX homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cartilage condensation (ortholog); myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 8 27537308 27612644 - 22301074;30032202 116907934 MODEL JAAIVD010000027;XM_032911149 XP_032767040 homeobox protein BarH-like 2 protein-coding 626025058 LOC116893341 eukaryotic peptide chain release factor subunit 1-like 2 156453950 156465983 - 116893341 MODEL JAAIVD010000001 pseudo 626025059 Elovl2 ELOVL fatty acid elongase 2 ENCODES a protein that exhibits acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); fatty acid elongase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid biosynthetic process (ortholog); fatty acid derivative biosynthetic process (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN endoplasmic reticulum (ortholog) 14 60171478 60213170 - 22301074;30032202 116883459 MODEL JAAIVD010000009;XM_032884607;XM_032884608 XP_032740498;XP_032740499 elongation of very long chain fatty acids protein 2 protein-coding 626025074 Mthfs methenyltetrahydrofolate synthetase ENCODES a protein that exhibits 5-formyltetrahydrofolate cyclo-ligase activity (ortholog); ATP binding (ortholog); folic acid binding (ortholog); INVOLVED IN folic acid catabolic process (ortholog); glutamate metabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN folate metabolic pathway; hereditary folate malabsorption pathway; methotrexate pharmacodynamics pathway; ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 8 82104544 82144878 - 30032202 116907323 MODEL JAAIVD010000027;XM_032910269 XP_032766160 5-formyltetrahydrofolate cyclo-ligase protein-coding 626025081 Pnliprp1 pancreatic lipase related protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); lipase activity (ortholog); INVOLVED IN pancreas development (ortholog); response to glucocorticoid (ortholog); response to peptide hormone (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN extracellular space (ortholog) 2 57371445 57387322 - 22301074;30032202 116893838 MODEL JAAIVD010000001;XM_032895555;XM_032895556 XP_032751446;XP_032751447 inactive pancreatic lipase-related protein 1 protein-coding 626025102 Cmtm8 CKLF like MARVEL transmembrane domain containing 8 FOUND IN nucleoplasm (ortholog) 8 105401339 105456367 - 22301074;30032202 116907830 MODEL JAAIVD010000027;XM_032911016 XP_032766907 CKLF-like MARVEL transmembrane domain-containing protein 8 protein-coding 626025110 LOC116899016 keratin-associated protein 27-1 4 55178020 55178628 + 30032202 116899016 MODEL JAAIVD010000003;XM_032900464 XP_032756355 protein-coding 626025113 LOC116888066 replication factor C subunit 5-like X 88765247 88768523 + 116888066 MODEL JAAIVD010000014 pseudo 626025114 Il36rn interleukin 36 receptor antagonist INVOLVED IN antifungal humoral response (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); negative regulation of interleukin-17 production (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); Myocardial Reperfusion Injury (ortholog) 5 12922671 12929211 - 22301074;30032202 116900108 MODEL JAAIVD010000023;XM_032901884 XP_032757775 interleukin-36 receptor antagonist protein protein-coding 626025124 Lrrc74a leucine rich repeat containing 74A 7 100825028 100855146 + 22301074 116905821 MODEL JAAIVD010000026;XM_032908788;XM_032908789 XP_032764679;XP_032764680 leucine-rich repeat-containing protein 74A protein-coding 626025145 LOC116900901 uncharacterized LOC116900901 5 76161055 76164626 + 116900901 MODEL JAAIVD010000023 pseudo 626025146 LOC116898596 basic proline-rich protein-like 4 178968069 178970796 - 116898596 MODEL JAAIVD010000003;XM_032899791 XP_032755682 protein-coding 626025152 LOC116883199 60S ribosomal protein L27-like 14 39844709 39845106 + 116883199 MODEL JAAIVD010000009 pseudo 626025153 LOC116889378 uncharacterized LOC116889378 X 12294250 12330190 - 116889378 MODEL JAAIVD010000014;XR_004386378 ncrna 626025160 Mfhas1 multifunctional ROCO family signaling regulator 1 ENCODES a protein that exhibits GTP binding (ortholog); protein phosphatase 2A binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN defense response (ortholog); erythrocyte differentiation (ortholog); inflammatory response (ortholog); ASSOCIATED WITH fibrous histiocytoma (ortholog); malignant fibrous histiocytoma (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); lysosome (ortholog) 13 51382041 51472555 - 22301074 116915072 MODEL JAAIVD010000008;XM_032919488;XM_032919489;XM_032919490;XR_004389793 XP_032775379;XP_032775380;XP_032775381 malignant fibrous histiocytoma amplified sequence 1;malignant fibrous histiocytoma-amplified sequence 1 protein-coding 626025178 Casp8 caspase 8 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); cysteine-type endopeptidase activity (ortholog); death effector domain binding (ortholog); INVOLVED IN angiogenesis (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; extrinsic apoptotic pathway; FasL mediated signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cell body (ortholog); cytoplasm (ortholog) 4 133627869 133647363 - 22301074;30032202 116899422 MODEL JAAIVD010000003;XM_032901161 XP_032757052 caspase-8 protein-coding 626025190 Meikin meiotic kinetochore factor INVOLVED IN female meiosis chromosome segregation (ortholog); homologous chromosome segregation (ortholog); male meiosis chromosome segregation (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); kinetochore (ortholog) 9 36827763 36875218 + 30032202 116910217 MODEL JAAIVD010000002;XM_032914107 XP_032769998 meiosis-specific kinetochore protein protein-coding 626025207 Wfdc8 WAP four-disulfide core domain 8 5 153360286 153369436 + 22301074 116902354 MODEL JAAIVD010000023;XM_032904840 XP_032760731 WAP four-disulfide core domain protein 8 protein-coding 626025216 LOC116898156 60S ribosomal protein L35-like 4 118779425 118779795 + 116898156 MODEL JAAIVD010000003 pseudo 626025217 LOC116889250 chorion-specific transcription factor GCMa-like 1 236834180 236885902 - 30032202 116889250 MODEL JAAIVD010000025;XM_032890419 XP_032746310 protein-coding 626025222 LOC116905129 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 7 83694380 83695933 - 116905129 MODEL JAAIVD010000026 pseudo 626025223 LOC116890299 U2 spliceosomal RNA 1 216960007 216960138 - 116890299 MODEL JAAIVD010000025 pseudo 626025224 Pigs phosphatidylinositol glycan anchor biosynthesis class S INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 95 (ortholog); genetic disease (ortholog); FOUND IN GPI-anchor transamidase complex (ortholog) 9 92096231 92111522 - 22301074;30032202 116909668 MODEL JAAIVD010000002;XM_032913323 XP_032769214 GPI transamidase component PIG-S protein-coding 626025240 LOC116894403 glyceraldehyde-3-phosphate dehydrogenase-like 2 157384035 157385039 + 116894403 MODEL JAAIVD010000001 pseudo 626025241 LOC116897759 60S ribosomal protein L21-like 1 38436581 38437063 + 22301074;30032202 116897759 MODEL JAAIVD010000025;XM_032899190 XP_032755081 protein-coding 626025244 LOC116910536 60S ribosomal protein L21-like 9 50201746 50202226 - 116910536 MODEL JAAIVD010000002 pseudo 626025245 LOC116902023 exosome complex component RRP43-like 1 101267391 101268511 + 30032202 116902023 MODEL JAAIVD010000025;XM_032904300 XP_032760191 protein-coding 626025250 LOC116897215 enhancer of rudimentary homolog 3 190672856 190673611 + 116897215 MODEL JAAIVD010000012;XM_032898932 XP_032754823 protein-coding 626025255 LOC116892107 myoblast determination protein 1-like 2 152991723 152993437 - 22301074;30032202 116892107 MODEL JAAIVD010000001;XM_032893585 XP_032749476 protein-coding 626025260 LOC116895845 MLV-related proviral Env polyprotein-like 3 84279247 84281269 - 116895845 MODEL JAAIVD010000012 pseudo 626025261 LOC116898769 uncharacterized LOC116898769 1 41261866 41277032 + 116898769 MODEL JAAIVD010000025;XR_004387662 ncrna 626025265 LOC116911853 small nucleolar RNA SNORD78 10 40326406 40326471 + 116911853 MODEL JAAIVD010000005;XR_004389375 snorna 626025268 LOC116904589 complement C1r subcomponent-like protein 6 23278864 23283221 - 22301074;30032202 116904589 MODEL JAAIVD010000024;XM_032907385 XP_032763276 protein-coding 626025276 Tmem210 transmembrane protein 210 FOUND IN acrosomal vesicle (ortholog) 5 11896154 11897202 - 116900028 MODEL JAAIVD010000023;XM_032901824 XP_032757715 protein-coding 626025282 LOC116893777 gastric triacylglycerol lipase 2 33589359 33607856 + 22301074;30032202 116893777 MODEL JAAIVD010000001;XM_032895476;XM_032895478 XP_032751367;XP_032751369 protein-coding 626025300 LOC116904782 small Cajal body-specific RNA 20 6 88055810 88055944 + 116904782 MODEL JAAIVD010000024;XR_004388446 ncrna 626025303 Cpne1 copine 1 ENCODES a protein that exhibits calcium ion binding (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); negative regulation of gene expression (ortholog); negative regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 5 135434249 135466288 - 30032202 116902196 MODEL JAAIVD010000023;XM_032904562 XP_032760453 copine-1 protein-coding 626025323 Pacc1 proton activated chloride channel 1 ENCODES a protein that exhibits pH-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); FOUND IN plasma membrane (ortholog) 10 69415295 69439268 + 30032202 116911781 MODEL JAAIVD010000005;XM_032915774;XM_032915775 XP_032771665;XP_032771666 proton-activated chloride channel protein-coding 626025337 Arhgap18 Rho GTPase activating protein 18 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of actin cytoskeleton organization (ortholog); regulation of actin filament polymerization (ortholog); regulation of cell motility (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic microtubule (ortholog); cytosol (ortholog) 2 212787390 212934430 + 22301074;30032202 116892962 MODEL JAAIVD010000001;XM_032894913 XP_032750804 rho GTPase-activating protein 18 protein-coding 626025356 Masp1 MBL associated serine protease 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH 3MC syndrome 1 (ortholog); 3MC syndrome 2 (ortholog); 3MC syndrome 3 (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 4 8256597 8327395 - 22301074;30032202 116898727 MODEL JAAIVD010000003;XM_032900034;XM_032900035 XP_032755925;XP_032755926 mannan binding lectin serine peptidase 1;mannan-binding lectin serine protease 1 protein-coding 626025381 LOC116900396 olfactory receptor 4P4-like 5 69890994 69891929 - 22301074 116900396 MODEL JAAIVD010000023;XM_032902142 XP_032758033 protein-coding 626025384 LOC116913668 apolipoprotein L3-like 1 249738848 249754829 - 22301074;30032202 116913668 MODEL JAAIVD010000025;XM_032917958;XM_032917966;XM_032917973;XM_032917979 XP_032773849;XP_032773857;XP_032773864;XP_032773870 protein-coding 626025400 Rsl1d1 ribosomal L1 domain containing 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN regulation of apoptotic process (ortholog); regulation of cellular senescence (ortholog); regulation of protein localization (ortholog); FOUND IN chromosome (ortholog); cilium (ortholog); cytosol (ortholog) 9 10995931 11007835 - 30032202 116908718 MODEL JAAIVD010000002;XM_032912056 XP_032767947 ribosomal L1 domain-containing protein 1 protein-coding 626025413 LOC116911804 small nucleolar RNA SNORA67 10 39610873 39611015 - 116911804 MODEL JAAIVD010000005;XR_004389344 snorna 626025416 LOC116890031 40S ribosomal protein S10-like 1 199239171 199239668 + 30032202 116890031 MODEL JAAIVD010000025;XM_032890808 XP_032746699 protein-coding 626025419 Naa25 N-alpha-acetyltransferase 25, NatB auxiliary subunit FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 16 32366270 32418189 - 22301074;30032202 116885212 MODEL JAAIVD010000004;XM_032886443 XP_032742334 protein-coding 626025447 Shisal1 shisa like 1 1 253773581 253836185 - 116914547 MODEL JAAIVD010000025;XM_032918886;XM_032918897 XP_032774777;XP_032774788 protein shisa-like-1 protein-coding 626025461 Fance FA complementation group E INVOLVED IN gene expression (ortholog); homeostasis of number of cells (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); breast cancer (ortholog); colon carcinoma (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome (ortholog) 18 5534374 5545618 - 30032202 116887581 MODEL JAAIVD010000013;XM_032889206 XP_032745097 Fanconi anemia group E protein protein-coding 626025474 Plau plasminogen activator, urokinase ENCODES a protein that exhibits peptidase activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cellular response to fluid shear stress (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN fibrinolysis pathway; fibroblast growth factor signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); protein complex involved in cell-matrix adhesion (ortholog) 12 90640107 90644987 + 22301074;30032202 116913465 MODEL JAAIVD010000007;XM_032917670 XP_032773561 urokinase-type plasminogen activator protein-coding 626025488 Tigd4 tigger transposable element derived 4 3 69005728 69007306 - 22301074;30032202 116895439 MODEL JAAIVD010000012;XM_032896716 XP_032752607 tigger transposable element-derived protein 4 protein-coding 626025492 LOC116913214 mast cell protease 4-like 12 69020360 69023092 - 22301074;30032202 116913214 MODEL JAAIVD010000007;XM_032917393 XP_032773284 protein-coding 626025500 LOC116899972 ribonuclease T2-A-like 5 130002096 130002659 - 22301074;30032202 116899972 MODEL JAAIVD010000023;XM_032901795 XP_032757686 protein-coding 626025504 Klk6 kallikrein related peptidase 6 ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN positive regulation of G protein-coupled receptor signaling pathway (ortholog); regulation of neuron projection development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); breast carcinoma (ortholog); demyelinating disease (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 2 155560835 155568113 - 22301074 116892225 MODEL JAAIVD010000001;XM_032893789 XP_032749680 kallikrein-6 protein-coding 626025515 Mettl24 methyltransferase like 24 18 40442280 40559288 + 116887272 MODEL JAAIVD010000013;XM_032888842 XP_032744733 methyltransferase-like protein 24 protein-coding 626025524 Tgm2 transglutaminase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); GTP binding (ortholog); histone dopaminyltransferase activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); branching involved in salivary gland morphogenesis (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); celiac disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 137461637 137491229 - 22301074;30032202 116902235 MODEL JAAIVD010000023;XM_032904644 XP_032760535 protein-glutamine gamma-glutamyltransferase 2 protein-coding 626025541 LOC116894759 small nuclear ribonucleoprotein F-like 2 174191299 174192190 + 116894759 MODEL JAAIVD010000001 pseudo 626025542 LOC116904343 high mobility group protein B1-like 6 71203707 71204366 + 116904343 MODEL JAAIVD010000024 pseudo 626025543 Gja5 gap junction protein alpha 5 ENCODES a protein that exhibits connexin binding (ortholog); disordered domain specific binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle cell to AV node cell communication by electrical coupling (ortholog); PARTICIPATES IN connexin signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); atrial standstill 1 (ortholog); Brain Injuries (ortholog); FOUND IN cell projection (ortholog); connexin complex (ortholog); gap junction (ortholog) 3 60257795 60277956 - 22301074;30032202 116895399 MODEL JAAIVD010000012;XM_032896685 XP_032752576 gap junction alpha-5 protein protein-coding 626025549 LOC116893851 olfactory receptor 13G1-like 2 61345268 61346191 - 22301074 116893851 MODEL JAAIVD010000001;XM_032895571 XP_032751462 protein-coding 626025552 Lgals9 galectin 9 ENCODES a protein that exhibits carbohydrate binding (ortholog); disaccharide binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); cellular response to virus (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); nephritis (ortholog); Pneumococcal Meningitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 9 91464721 91487885 + 22301074;30032202 116909303 MODEL JAAIVD010000002;XM_032912843;XM_032912844 XP_032768734;XP_032768735 galectin-9 protein-coding 626025570 Znf707 zinc finger protein 707 1 248259640 248292768 + 30032202 116912745 MODEL JAAIVD010000025;XM_032916896;XM_032916901;XM_032916908 XP_032772787;XP_032772792;XP_032772799 protein-coding 626025585 LOC116889020 polypyrimidine tract-binding protein 1-like X 16737177 16743497 + 116889020 MODEL JAAIVD010000014 pseudo 626025586 Orc3 origin recognition complex subunit 3 INVOLVED IN DNA replication initiation (ortholog); glial cell proliferation (ortholog); neural precursor cell proliferation (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nuclear origin of replication recognition complex (ortholog) 1 108134662 108189595 + 30032202 116902200 MODEL JAAIVD010000025;XM_032904574;XM_032904583;XM_032904594 XP_032760465;XP_032760474;XP_032760485 protein-coding 626025614 LOC116899732 60S ribosomal protein L12-like 1 53450935 53451528 + 116899732 MODEL JAAIVD010000025 pseudo 626025615 LOC116912665 PRELI domain-containing protein 1, mitochondrial-like 11 9368758 9369491 - 116912665 MODEL JAAIVD010000006 pseudo 626025616 LOC116908357 small nucleolar RNA Z40 8 11110543 11110615 + 116908357 MODEL JAAIVD010000027;XR_004388907 snorna 626025619 LOC116911664 receptor-type tyrosine-protein phosphatase V 10 580574 601176 + 22301074 116911664 MODEL JAAIVD010000005;XM_032915618 XP_032771509 protein-coding 626025658 Mvd mevalonate diphosphate decarboxylase ENCODES a protein that exhibits diphosphomevalonate decarboxylase activity (ortholog); Hsp70 protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); isopentenyl diphosphate biosynthetic process, mevalonate pathway (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Hypercholesterolemia (ortholog); porokeratosis (ortholog); Porokeratosis 7, Multiple Types (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal matrix (ortholog) 17 42073235 42083429 - 22301074;30032202 116886401 MODEL JAAIVD010000011;XM_032887871 XP_032743762 diphosphomevalonate decarboxylase protein-coding 626025672 Nudt3 nudix hydrolase 3 ENCODES a protein that exhibits 5'-(N(7)-methyl 5'-triphosphoguanosine)-[mRNA] diphosphatase activity (ortholog); 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); diphosphoinositol-polyphosphate diphosphatase activity (ortholog); INVOLVED IN diadenosine hexaphosphate catabolic process (ortholog); diphosphoinositol polyphosphate catabolic process (ortholog); RNA decapping (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 18 6223577 6271018 + 30032202 116886877 MODEL JAAIVD010000013;XM_032888333 XP_032744224 diphosphoinositol polyphosphate phosphohydrolase 1 protein-coding 626025681 Srp9 signal recognition particle 9 PARTICIPATES IN interleukin-3 signaling pathway 10 60445822 60453525 + 22301074;30032202 116911339 MODEL JAAIVD010000005;XM_032915254 XP_032771145 signal recognition particle 9 kDa protein protein-coding 626025688 Uxs1 UDP-glucuronate decarboxylase 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN UDP-D-xylose biosynthetic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; GALE deficiency pathway; nucleotide sugar metabolic pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); FOUND IN catalytic complex (ortholog); Golgi membrane (ortholog) 4 87210350 87283432 + 22301074;30032202 116899155 MODEL JAAIVD010000003;XM_032900707;XM_032900708;XM_032900709;XM_032900710;XM_032900711;XM_032900713;XM_032900714 XP_032756598;XP_032756599;XP_032756600;XP_032756601;XP_032756602;XP_032756604;XP_032756605 UDP-glucuronic acid decarboxylase 1 protein-coding 626025725 Cnnm3 cyclin and CBS domain divalent metal cation transport mediator 3 4 112735850 112751028 + 30032202 116899292 MODEL JAAIVD010000003;XM_032900934 XP_032756825 metal transporter CNNM3 protein-coding 626025737 Tdo2 tryptophan 2,3-dioxygenase ENCODES a protein that exhibits amino acid binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN L-tryptophan catabolic process to acetyl-CoA (ortholog); L-tryptophan catabolic process to kynurenine (ortholog); L-tryptophan metabolic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); Alzheimer's disease (ortholog); autistic disorder (ortholog) 3 71592801 71609956 + 22301074;30032202 116895447 MODEL JAAIVD010000012;XM_032896725 XP_032752616 protein-coding 626025753 Pi15 peptidase inhibitor 15 1 151543718 151571468 + 22301074;30032202 116889848 MODEL JAAIVD010000025;XM_032890679 XP_032746570 protein-coding 626025763 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 23196673 23196745 - 116906532 MODEL JAAIVD010000026 trna 626025764 LOC116895881 baculoviral IAP repeat-containing protein 1b-like 3 109695469 109715738 + 30032202 116895881 MODEL JAAIVD010000012;XM_032896977 XP_032752868 protein-coding 626025773 LOC116885040 U2 spliceosomal RNA 15 31109554 31109703 - 116885040 MODEL JAAIVD010000010 pseudo 626025774 LOC116895108 5S ribosomal RNA 2 10037406 10037523 - 116895108 MODEL JAAIVD010000001 pseudo 626025775 LOC116911843 small nucleolar RNA SNORA17 10 92974174 92974292 + 116911843 MODEL JAAIVD010000005 pseudo 626025776 LOC116885798 40S ribosomal protein S9-like 16 23995855 23996567 - 22301074;30032202 116885798 MODEL JAAIVD010000004;XM_032887130 XP_032743021 protein-coding 626025781 LOC116894380 myosin regulatory light chain RLC-A-like 2 156721716 156722245 - 116894380 MODEL JAAIVD010000001 pseudo 626025782 Tnrc6c trinucleotide repeat containing adaptor 6C INVOLVED IN embryonic hemopoiesis (ortholog); embryonic organ development (ortholog); endoderm development (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH COVID-19 (ortholog); intellectual disability (ortholog) 9 66306846 66379436 - 22301074;30032202 116910200 MODEL JAAIVD010000002;XM_032914062;XM_032914063;XM_032914064 XP_032769953;XP_032769954;XP_032769955 trinucleotide repeat-containing gene 6C protein protein-coding 626025813 Mrps23 mitochondrial ribosomal protein S23 ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 46 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nuclear membrane (ortholog) 9 82597442 82605643 - 22301074;30032202 116909893 MODEL JAAIVD010000002;XM_032913640 XP_032769531 28S ribosomal protein S23, mitochondrial protein-coding 626025822 LOC116905815 uncharacterized LOC116905815 7 99573421 99575315 - 116905815 MODEL JAAIVD010000026;XR_004388569 ncrna 626025826 LOC116893159 olfactory receptor 51M1-like 2 101703922 101704908 - 22301074 116893159 MODEL JAAIVD010000001;XM_032895076 XP_032750967 protein-coding 626025830 LOC116886707 uncharacterized LOC116886707 17 25848994 25850134 + 116886707 MODEL JAAIVD010000011;XR_004386127 ncrna 626025834 Sall2 spalt like transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); protein-containing complex binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eye development (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH coloboma (ortholog) 12 71564674 71581469 + 30032202 116913617 MODEL JAAIVD010000007;XM_032917869;XM_032917870 XP_032773760;XP_032773761 sal-like protein 2 protein-coding 626025843 Phf24 PHD finger protein 24 INVOLVED IN detection of mechanical stimulus involved in sensory perception of pain (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic vesicle membrane (ortholog) 1 3568922 3594354 - 116891236 MODEL JAAIVD010000025;XM_032892095;XM_032892105;XM_032892113;XM_032892122;XM_032892130;XM_032892136 XP_032747986;XP_032747996;XP_032748004;XP_032748013;XP_032748021;XP_032748027 protein-coding 626025868 LOC116914387 defensin alpha-like protein 1 13 64867249 64868161 + 30032202 116914387 MODEL JAAIVD010000008;XM_032918602 XP_032774493 protein-coding 626025874 LOC116893165 olfactory receptor 52I2-like 2 102622709 102623665 + 116893165 MODEL JAAIVD010000001 pseudo 626025875 LOC116891941 uncharacterized LOC116891941 2 120697592 120718857 - 116891941 MODEL JAAIVD010000001;XR_004386870 ncrna 626025879 LOC116914643 arylamine N-acetyltransferase 3 13 21791067 21792836 - 22301074;30032202 116914643 MODEL JAAIVD010000008;XM_032919037 XP_032774928 protein-coding 626025884 Dennd1b DENN domain containing 1B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); positive regulation of GTPase activity (ortholog); positive regulation of T-helper 2 cell cytokine production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) 10 19318255 19530994 + 30032202 116911442 MODEL JAAIVD010000005;XM_032915408;XM_032915409 XP_032771299;XP_032771300 DENN domain-containing protein 1B protein-coding 626025912 LOC116914849 60S ribosomal protein L21-like 13 5647682 5648163 + 116914849 MODEL JAAIVD010000008 pseudo 626025913 LOC116913441 granzyme F-like 12 68824189 68835735 + 22301074;30032202 116913441 MODEL JAAIVD010000007;XM_032917641 XP_032773532 protein-coding 626025922 Ep400 E1A binding protein p400 ENCODES a protein that exhibits chromatin binding (ortholog); protein antigen binding (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleosome (ortholog) 16 43574097 43680770 + 22301074 116885573 MODEL JAAIVD010000004;XM_032886868 XP_032742759 E1A-binding protein p400 protein-coding 626025979 LOC116897608 U1 spliceosomal RNA 3 159498988 159499140 - 116897608 MODEL JAAIVD010000012 pseudo 626025980 Mtrfr mitochondrial translation release factor in rescue ENCODES a protein that exhibits ribosomal large subunit binding (ortholog); translation release factor activity, codon specific (ortholog); tRNA binding (ortholog); INVOLVED IN rescue of stalled ribosome (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 6 (ortholog); combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 7 (ortholog); FOUND IN mitochondrion (ortholog) 16 29531029 29544868 - 22301074;30032202 116885230 MODEL JAAIVD010000004;XM_032886468 XP_032742359 C16H12orf65 chromosome 16 C12orf65 homolog;probable peptide chain release factor C12orf65 homolog, mitochondrial protein-coding 626025987 LOC116897571 small nucleolar RNA SNORA17 3 204494850 204494972 - 116897571 MODEL JAAIVD010000012 pseudo 626025988 Dcaf1 DDB1 and CUL4 associated factor 1 ENCODES a protein that exhibits histone H2AT120 kinase activity (ortholog); nuclear estrogen receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); base-excision repair, AP site formation via deaminated base removal (ortholog); cell competition in a multicellular organism (ortholog); FOUND IN centrosome (ortholog); COP9 signalosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) 8 98131459 98196729 + 30032202 116907503 MODEL JAAIVD010000027;XM_032910501;XM_032910502;XM_032910503 XP_032766392;XP_032766393;XP_032766394 DDB1- and CUL4-associated factor 1 protein-coding 626026021 LOC116886714 ubiquitin-40S ribosomal protein S27a-like 17 24274152 24274620 - 116886714 MODEL JAAIVD010000011 pseudo 626026022 Kif20b kinesin family member 20B ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN neural tube closure (ortholog); neuron projection morphogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); contractile ring (ortholog) 2 34536900 34589622 + 22301074;30032202 116891113 MODEL JAAIVD010000001;XM_032891828;XM_032891829 XP_032747719;XP_032747720 kinesin-like protein KIF20B protein-coding 626026058 Npr2 natriuretic peptide receptor 2 ENCODES a protein that exhibits guanylate cyclase activity (ortholog); hormone binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of meiosis involved in egg activation (ortholog); axonogenesis (ortholog); axonogenesis involved in innervation (ortholog); PARTICIPATES IN C-type natriuretic peptide signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acromesomelic dysplasia (ortholog); acromesomelic dysplasia, Maroteaux type (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); neuron projection (ortholog) 1 2850623 2870957 - 22301074;30032202 116890952 MODEL JAAIVD010000025;XM_032891604 XP_032747495 atrial natriuretic peptide receptor 2 protein-coding 626026084 LOC116883421 cathepsin 8-like 14 77003252 77012657 + 30032202 116883421 MODEL JAAIVD010000009;XM_032884550;XM_032884551 XP_032740441;XP_032740442 protein-coding 626026096 LOC116893945 olfactory receptor 10A3-like 2 92596504 92597484 + 116893945 MODEL JAAIVD010000001;XR_004387016 pseudo 626026099 Senp2 SUMO specific peptidase 2 ENCODES a protein that exhibits deSUMOylase activity (ortholog); protein domain specific binding (ortholog); SUMO-specific endopeptidase activity (ortholog); INVOLVED IN dorsal/ventral axis specification (ortholog); fat cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 4 6692062 6729353 + 30032202 116898715 MODEL JAAIVD010000003;XM_032900006;XM_032900007 XP_032755897;XP_032755898 sentrin-specific protease 2 protein-coding 626026124 LOC116894834 U6 spliceosomal RNA 2 176616598 176616704 - 116894834 MODEL JAAIVD010000001;XR_004387049 snrna 626026127 C2H11orf68 chromosome 2 C11orf68 homolog ASSOCIATED WITH melanoma (ortholog) 2 2244757 2247009 - 116890718 MODEL JAAIVD010000001;XM_032891167;XM_032891168 XP_032747058;XP_032747059 UPF0696 protein C11orf68 homolog protein-coding 626026136 LOC116888915 igE-binding protein-like X 39032005 39033086 + 22301074 116888915 MODEL JAAIVD010000014;XM_032890165 XP_032746056 protein-coding 626026139 LOC116889300 glyceraldehyde-3-phosphate dehydrogenase-like 1 130110405 130111407 - 116889300 MODEL JAAIVD010000025 pseudo 626026140 LOC116904577 taste receptor type 2 member 104 6 16662420 16663328 + 22301074;30032202 116904577 MODEL JAAIVD010000024;XM_032907373 XP_032763264 protein-coding 626026143 Ccdc3 coiled-coil domain containing 3 INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of lipid biosynthetic process (ortholog); negative regulation of lipid metabolic process (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog) 14 11490452 11587716 + 30032202 116883498 MODEL JAAIVD010000009;XM_032884667 XP_032740558 coiled-coil domain-containing protein 3 protein-coding 626026149 Prmt3 protein arginine methyltransferase 3 ENCODES a protein that exhibits histone H4R3 methyltransferase activity (ortholog); methyltransferase activity (ortholog); modified amino acid binding (ortholog); INVOLVED IN dendritic spine morphogenesis (ortholog); negative regulation of protein ubiquitination (ortholog); negative regulation of retinoic acid biosynthetic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 149974174 150063185 - 22301074;30032202 116892071 MODEL JAAIVD010000001;XM_032893541 XP_032749432 protein arginine N-methyltransferase 3 protein-coding 626026169 Mtcl1 microtubule crosslinking factor 1 ENCODES a protein that exhibits microtubule binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN chromosome segregation (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); microtubule bundle formation (ortholog); ASSOCIATED WITH autosomal dominant cerebellar ataxia (ortholog); cerebellar ataxia (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cytoskeleton (ortholog); kinetochore (ortholog) 4 176004029 176126698 - 22301074;30032202 116899699 MODEL JAAIVD010000003;XM_032901723 XP_032757614 microtubule cross-linking factor 1 protein-coding 626026189 LOC116897955 olfactory receptor 5AC1-like 4 43189436 43191000 - 22301074;30032202 116897955 MODEL JAAIVD010000003;XM_032899357;XM_032899358 XP_032755248;XP_032755249 protein-coding 626026195 LOC116899750 U6 spliceosomal RNA 4 126436575 126436677 + 116899750 MODEL JAAIVD010000003;XR_004387765 snrna 626026198 Sgms1 sphingomyelin synthase 1 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); sphingomyelin synthase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH pulmonary edema (ortholog); FOUND IN Golgi membrane (ortholog); Golgi trans cisterna (ortholog) 2 32167579 32433351 - 22301074;30032202 116891090 MODEL JAAIVD010000001;XM_032891803;XM_032891804;XM_032891806 XP_032747694;XP_032747695;XP_032747697 phosphatidylcholine:ceramide cholinephosphotransferase 1 protein-coding 626026218 Btbd6 BTB domain containing 6 7 130581393 130584059 + 22301074;30032202 116905525 MODEL JAAIVD010000026;XM_032908549;XM_032908550;XM_032908551 XP_032764440;XP_032764441;XP_032764442 BTB/POZ domain-containing protein 6 protein-coding 626026233 Tars3 threonyl-tRNA synthetase 3 ENCODES a protein that exhibits threonine-tRNA ligase activity (ortholog); INVOLVED IN threonyl-tRNA aminoacylation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 134659995 134824997 - 22301074;30032202 116892002 MODEL JAAIVD010000001;XM_032893460 XP_032749351 threonine--tRNA ligase 2, cytoplasmic protein-coding 626026256 Mbd4 methyl-CpG binding domain 4, DNA glycosylase ENCODES a protein that exhibits DNA binding (ortholog); pyrimidine-specific mismatch base pair DNA N-glycosylase activity (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); PARTICIPATES IN altered DNA modification pathway; DNA modification pathway; ASSOCIATED WITH autistic disorder (ortholog); colorectal carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 6 30872004 30882213 + 22301074;30032202 116903376 MODEL JAAIVD010000024;XM_032905864 XP_032761755 methyl-CpG-binding domain protein 4 protein-coding 626026268 LOC116906279 PRELI domain-containing protein 1, mitochondrial-like 7 72217526 72218082 + 116906279 MODEL JAAIVD010000026 pseudo 626026269 LOC116885999 small nucleolar RNA SNORA42/SNORA80 family 16 32619654 32619787 - 116885999 MODEL JAAIVD010000004;XR_004386071 snorna 626026272 Kmt2a lysine methyltransferase 2A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute monocytic leukemia (ortholog); FOUND IN cytosol (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) 8 39336343 39416125 - 22301074;30032202 116907813 MODEL JAAIVD010000027;XM_032910990 XP_032766881 histone-lysine N-methyltransferase 2A protein-coding 626026312 Mogat2 monoacylglycerol O-acyltransferase 2 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); acetyltransferase activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); intestinal absorption (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear endoplasmic reticulum membrane (ortholog) 2 97496630 97521151 - 30032202 116893958 MODEL JAAIVD010000001;XM_032895676 XP_032751567 2-acylglycerol O-acyltransferase 2 protein-coding 626026322 LOC116883280 non-histone chromosomal protein HMG-17-like 14 80501071 80501621 + 116883280 MODEL JAAIVD010000009 pseudo 626026323 LOC116896287 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3 3 35690101 35774295 - 22301074;30032202 116896287 MODEL JAAIVD010000012;XM_032897369 XP_032753260 protein-coding 626026333 Terf2 telomeric repeat binding factor 2 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); enzyme binding (ortholog); G-rich strand telomeric DNA binding (ortholog); INVOLVED IN axonal transport of messenger ribonucleoprotein complex (ortholog); in utero embryonic development (ortholog); negative regulation of cellular senescence (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); xeroderma pigmentosum (ortholog); FOUND IN chromosome, telomeric region (ortholog); male germ cell nucleus (ortholog); nuclear body (ortholog) 17 26797709 26825711 - 22301074;30032202 116886296 MODEL JAAIVD010000011;XM_032887732 XP_032743623 telomeric repeat-binding factor 2 protein-coding 626026347 Dnpep aspartyl aminopeptidase ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytosol (ortholog) 4 148660818 148669576 - 22301074;30032202 116899531 MODEL JAAIVD010000003;XM_032901401 XP_032757292 protein-coding 626026366 LOC116906965 uncharacterized LOC116906965 8 42661705 42749363 + 116906965 MODEL JAAIVD010000027;XR_004388788 ncrna 626026371 LOC116886685 60S ribosomal protein L10a-like 17 46521249 46521843 - 116886685 MODEL JAAIVD010000011 pseudo 626026372 LOC116910335 dolichol-phosphate mannosyltransferase subunit 3-like 9 63092785 63094551 - 116910335 MODEL JAAIVD010000002 pseudo 626026373 Perp p53 apoptosis effector related to PMP22 INVOLVED IN amelogenesis (ortholog); desmosome organization (ortholog); heterotypic cell-cell adhesion (ortholog); ASSOCIATED WITH Erythrokeratodermia Variabilis et Progressiva 7 (ortholog); genetic disease (ortholog); Olmsted Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); desmosome (ortholog); Golgi apparatus (ortholog) 2 217997065 218009432 - 22301074;30032202 116892986 MODEL JAAIVD010000001;XM_032894945 XP_032750836 p53 apoptosis effector related to PMP-22 protein-coding 626026380 Trappc8 trafficking protein particle complex subunit 8 INVOLVED IN collagen biosynthetic process (ortholog); Golgi organization (ortholog); FOUND IN TRAPP complex (ortholog) 15 22790739 22846756 + 22301074;30032202 116884254 MODEL JAAIVD010000010;XM_032885338 XP_032741229 trafficking protein particle complex 8 protein-coding 626026411 LOC116910477 tumor necrosis factor ligand superfamily member 13 9 49293758 49297379 - 22301074;30032202 116910477 MODEL JAAIVD010000002;XM_032914352;XM_032914353;XM_032914354;XM_032914355;XM_032914356;XM_032914357;XM_032914358;XM_032914359 XP_032770243;XP_032770244;XP_032770245;XP_032770246;XP_032770247;XP_032770248;XP_032770249;XP_032770250 protein-coding 626026440 LOC116887277 olfactory receptor 2A2-like 1 38309950 38310888 - 22301074 116887277 MODEL JAAIVD010000025;XM_032888859 XP_032744750 protein-coding 626026443 LOC116890094 ADP/ATP translocase 2-like 1 230947410 230955517 - 116890094 MODEL JAAIVD010000025 pseudo 626026444 LOC116887346 cytochrome P450 4A10 1 39332325 39346684 + 22301074;30032202;3410047 116887346 MODEL JAAIVD010000025;X07259;XM_032888943;XM_032888950;XM_032888955 CAA30245;XP_032744834;XP_032744841;XP_032744846 protein-coding 626026470 Cimap1b ciliary microtubule associated protein 1B ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 258676286 258679526 - 30032202 116915113 MODEL JAAIVD010000025;XM_032919551;XM_032919561;XM_032919564 XP_032775442;XP_032775452;XP_032775455 Odf3b outer dense fiber of sperm tails 3B;outer dense fiber protein 3B protein-coding 626026487 Copz2 coat protein complex I subunit zeta 2 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN COPI vesicle coat (ortholog) 9 57523307 57536547 - 30032202 116909962 MODEL JAAIVD010000002;XM_032913737 XP_032769628 COPI coat complex subunit zeta 2;coatomer subunit zeta-2 protein-coding 626026500 LOC116902523 small nucleolar RNA SNORA62/SNORA6 family 5 130364940 130365092 + 116902523 MODEL JAAIVD010000023;XR_004388132 snorna 626026503 LOC116902934 60S ribosomal protein L21-like 6 116713429 116713897 + 22301074;30032202 116902934 MODEL JAAIVD010000024;XM_032905259 XP_032761150 protein-coding 626026507 LOC116890490 small nucleolar RNA SNORA48 1 189659678 189659820 + 116890490 MODEL JAAIVD010000025;XR_004386677 snorna 626026510 Cd164 CD164 molecule INVOLVED IN cell adhesion (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 66 (ortholog); lung cancer (ortholog); Spontaneous Abortions (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog); plasma membrane (ortholog) 18 41219164 41230835 + 30032202 116886890 MODEL JAAIVD010000013;XM_032888346 XP_032744237 sialomucin core protein 24 protein-coding 626026520 Polr1g RNA polymerase I subunit G INVOLVED IN rRNA transcription (ortholog); transcription initiation at RNA polymerase I promoter (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH multiple myeloma (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); mitochondrion (ortholog) 2 171261511 171264821 + 22301074;30032202 116892535 MODEL JAAIVD010000001;XM_032894296 XP_032750187 Cd3eap CD3e molecule associated protein;DNA-directed RNA polymerase I subunit RPA34 protein-coding 626026527 Acsm3 acyl-CoA synthetase medium chain family member 3 ENCODES a protein that exhibits fatty acid ligase activity (ortholog); medium-chain fatty acid-CoA ligase activity (ortholog); propionate CoA-transferase activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH hypertension (ortholog); IgA glomerulonephritis (ortholog); ocular hypertension (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 81893335 81911835 - 30032202 116891597 MODEL JAAIVD010000001;XM_032892789 XP_032748680 acyl-coenzyme A synthetase ACSM3, mitochondrial protein-coding 626026544 LOC116893516 acetyl-CoA acetyltransferase, cytosolic-like 2 191651994 191667308 - 30032202 116893516 MODEL JAAIVD010000001;XM_032895249 XP_032751140 protein-coding 626026556 Cacng3 calcium voltage-gated channel auxiliary subunit gamma 3 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH childhood absence epilepsy (ortholog); macular degeneration (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); excitatory synapse (ortholog) 2 79088395 79182592 - 22301074;30032202 116891552 MODEL JAAIVD010000001;XM_032892722 XP_032748613 voltage-dependent calcium channel gamma-3 subunit protein-coding 626026564 LOC116884357 ral guanine nucleotide dissociation stimulator-like 15 38971525 38973086 + 116884357 MODEL JAAIVD010000010 pseudo 626026565 LOC116895409 ubiquitin-60S ribosomal protein L40-like 3 61320816 61321171 + 22301074;30032202 116895409 MODEL JAAIVD010000012;XM_032896692 XP_032752583 protein-coding 626026568 Guca2b guanylate cyclase activator 2B INVOLVED IN adipose tissue development (ortholog); body fluid secretion (ortholog); cGMP-mediated signaling (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); nephrotic syndrome (ortholog) 1 37326777 37328840 + 22301074;30032202 116887084 MODEL JAAIVD010000025;XM_032888596 XP_032744487 protein-coding 626026575 Znf770 zinc finger protein 770 5 92412456 92420031 - 30032202 116901761 MODEL JAAIVD010000023;XM_032903899 XP_032759790 protein-coding 626026582 LOC116884308 protocadherin alpha-2-like 15 7426846 7431471 - 22301074 116884308 MODEL JAAIVD010000010;XM_032885416 XP_032741307 protein-coding 626026587 Pcdh12 protocadherin 12 INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); glycogen metabolic process (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH Diencephalic-Mesencephalic Junction Dysplasia Syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog) 15 6644689 6660960 + 22301074 116884990 MODEL JAAIVD010000010;XM_032886210 XP_032742101 protocadherin-12 protein-coding 626026595 Iffo2 intermediate filament family orphan 2 1 18565029 18610967 - 116893641 MODEL JAAIVD010000025;XM_032895360;XM_032895367 XP_032751251;XP_032751258 protein-coding 626026611 Nemp2 nuclear envelope integral membrane protein 2 4 122720731 122738239 - 30032202 116899370 MODEL JAAIVD010000003;XM_032901082 XP_032756973 protein-coding 626026624 Lsm8 LSM8 homolog, U6 small nuclear RNA associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN Lsm2-8 complex (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 6 120644071 120649972 + 22301074;30032202 116904054 MODEL JAAIVD010000024;XM_032906913 XP_032762804 protein-coding 626026632 C14H5orf24 chromosome 14 C5orf24 homolog 14 74010111 74019817 + 116883385 MODEL JAAIVD010000009;XM_032884505 XP_032740396 UPF0461 protein C5orf24 homolog protein-coding 626026638 LOC116902470 U6 spliceosomal RNA 5 54558713 54558818 - 116902470 MODEL JAAIVD010000023;XR_004388088 snrna 626026641 LOC116894271 chromobox protein homolog 3-like 2 119528256 119528946 + 116894271 MODEL JAAIVD010000001 pseudo 626026642 LOC116895178 protein crumbs homolog 1-like 3 146304608 146305689 + 116895178 MODEL JAAIVD010000012 pseudo 626026643 LOC116912577 ATP synthase subunit epsilon, mitochondrial-like 11 71983511 71983831 + 22301074;30032202 116912577 MODEL JAAIVD010000006;XM_032916692 XP_032772583 protein-coding 626026648 Syt10 synaptotagmin 10 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); positive regulation of calcium ion-dependent exocytosis (ortholog); presynaptic dense core vesicle exocytosis (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); FOUND IN exocytic vesicle (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) 1 259074353 259139068 - 22301074;30032202 116915234 MODEL JAAIVD010000025;XM_032919629 XP_032775520 synaptotagmin-10 protein-coding 626026659 Rrp9 ribosomal RNA processing 9, U3 small nucleolar RNA binding protein ENCODES a protein that exhibits U3 snoRNA binding (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); nucleolus (ortholog); small-subunit processome (ortholog) 8 97775866 97785946 + 22301074;30032202 116907491 MODEL JAAIVD010000027;XM_032910483 XP_032766374 U3 small nucleolar RNA-interacting protein 2 protein-coding 626026679 LOC116902892 60S ribosomal protein L31-like 6 103689701 103690084 - 22301074;30032202 116902892 MODEL JAAIVD010000024;XM_032905223 XP_032761114 protein-coding 626026683 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42539953 42540034 + 116884238 MODEL JAAIVD010000009 trna 626026684 Acd ACD shelterin complex subunit and telomerase recruitment factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); protein-containing complex binding (ortholog); telomerase inhibitor activity (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); establishment of protein localization to telomere (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH autosomal dominant dyskeratosis congenita 6 (ortholog); Autosomal Recessive Dyskeratosis Congenita 7 (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) 17 25432703 25435485 - 22301074;30032202 116886063 MODEL JAAIVD010000011;XM_032887370 XP_032743261 adrenocortical dysplasia protein homolog protein-coding 626026699 LOC116886349 dipeptidase 2 17 25730215 25736381 - 22301074;30032202 116886349 MODEL JAAIVD010000011;XM_032887800 XP_032743691 protein-coding 626026713 LOC116910684 small nucleolar RNA SNORA21 9 56603271 56603406 + 116910684 MODEL JAAIVD010000002;XR_004389215 snorna 626026716 LOC116890443 small nucleolar RNA SNORA70 1 53209392 53209519 - 116890443 MODEL JAAIVD010000025 pseudo 626026717 LOC116886599 death effector domain-containing protein-like 17 8640925 8641447 - 116886599 MODEL JAAIVD010000011 pseudo 626026718 Mfap5 microfibril associated protein 5 INVOLVED IN definitive hemopoiesis (ortholog); supramolecular fiber organization (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); Familial Thoracic Aortic Aneurysm 9 (ortholog); thoracic aortic aneurysm (ortholog); FOUND IN extracellular matrix (ortholog) 6 24572665 24587471 - 22301074;30032202 116904604 MODEL JAAIVD010000024;XM_032907400 XP_032763291 microfibrillar-associated protein 5 protein-coding 626026732 LOC116888088 60S ribosomal protein L21-like 1 65678372 65678854 - 22301074;30032202 116888088 MODEL JAAIVD010000025;XM_032889458 XP_032745349 protein-coding 626026735 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42543788 42543869 + 116884242 MODEL JAAIVD010000009 trna 626026736 LOC116911438 glyceraldehyde-3-phosphate dehydrogenase-like 10 19555839 19556807 + 116911438 MODEL JAAIVD010000005 pseudo 626026737 LOC116906063 phosphatidylethanolamine-binding protein 1-like 7 51976308 51976865 - 116906063 MODEL JAAIVD010000026 pseudo 626026738 LOC116892674 isochorismatase domain-containing protein 2 2 177431328 177439425 - 30032202 116892674 MODEL JAAIVD010000001;XM_032894505 XP_032750396 protein-coding 626026747 LOC116903810 uncharacterized LOC116903810 6 88847130 88861444 - 116903810 MODEL JAAIVD010000024;XR_004388297;XR_004388298 ncrna 626026755 Abcd2 ATP binding cassette subfamily D member 2 ENCODES a protein that exhibits amide transmembrane transporter activity (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); hypothyroidism (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 1 264139947 264186092 - 22301074;30032202 116884156 MODEL JAAIVD010000025;XM_032885322 XP_032741213 ATP-binding cassette sub-family D member 2 protein-coding 626026769 Fam83c family with sequence similarity 83 member C ENCODES a protein that exhibits protein kinase binding (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 5 135183231 135189097 - 30032202 116902189 MODEL JAAIVD010000023;XM_032904554 XP_032760445 protein FAM83C protein-coding 626026777 St6galnac2 ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 ENCODES a protein that exhibits alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase activity (ortholog); INVOLVED IN protein glycosylation (ortholog); protein O-linked glycosylation (ortholog); protein sialylation (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); IgA glomerulonephritis (ortholog) 9 67376938 67393910 + 22301074 116909716 MODEL JAAIVD010000002;XM_032913388 XP_032769279 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 protein-coding 626026790 LOC116894298 60S ribosomal protein L7a-like 2 138725507 138726369 - 116894298 MODEL JAAIVD010000001 pseudo 626026791 Med29 mediator complex subunit 29 PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 2 167603902 167608370 + 22301074;30032202 116892394 MODEL JAAIVD010000001;XM_032894066 XP_032749957 mediator of RNA polymerase II transcription subunit 29 protein-coding 626026799 LOC116899812 small nucleolar RNA SNORA70 4 57520526 57520656 - 116899812 MODEL JAAIVD010000003 pseudo 626026800 Adam17 ADAM metallopeptidase domain 17 ENCODES a protein that exhibits cytokine binding (ortholog); endopeptidase activity (ortholog); integrin binding (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); B cell differentiation (ortholog); cell adhesion (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; interleukin-6 signaling pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); atopic dermatitis (ortholog); Blister (ortholog); FOUND IN actin cytoskeleton (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 7 37864815 37911293 - 22301074;30032202 116904908 MODEL JAAIVD010000026;XM_032907518 XP_032763409 disintegrin and metalloproteinase domain-containing protein 17 protein-coding 626026823 Ankfy1 ankyrin repeat and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); endosomal vesicle fusion (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Charlevoix-Saguenay spastic ataxia (ortholog); urinary bladder cancer (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); endosome membrane (ortholog) 9 42747980 42822506 - 22301074 116910180 MODEL JAAIVD010000002;XM_032914040 XP_032769931 rabankyrin-5 protein-coding 626026852 LOC116894113 putative olfactory receptor 56B2 2 103639839 103640798 + 22301074 116894113 MODEL JAAIVD010000001;XM_032895831 XP_032751722 protein-coding 626026855 LOC116884913 eukaryotic translation initiation factor 1A 15 40443353 40455474 - 22301074;30032202 116884913 MODEL JAAIVD010000010;XM_032886136;XM_032886137 XP_032742027;XP_032742028 protein-coding 626026865 Rag2 recombination activating 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell homeostatic proliferation (ortholog); B cell lineage commitment (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH combined cellular and humoral immune defects with granulomas (ortholog); common variable immunodeficiency (ortholog); Eosinophilia (ortholog) 5 79461144 79462727 + 22301074;30032202 116900513 MODEL JAAIVD010000023;JF437029;JF437034;JF437035;JF437041;JF437043;XM_032902242 AEW29959;AEW29964;AEW29965;AEW29971;AEW29973;XP_032758133 V(D)J recombination-activating protein 2;recombination activating protein 2 protein-coding 626026868 LOC116901276 uncharacterized LOC116901276 5 10829378 10832229 + 116901276 MODEL JAAIVD010000023;XR_004387972 ncrna 626026874 Ntn5 netrin 5 INVOLVED IN neurogenesis (ortholog) 2 153826171 153833152 - 22301074 116893323 MODEL JAAIVD010000001;XM_032895141 XP_032751032 netrin-5 protein-coding 626026882 Shcbp1l SHC binding and spindle associated 1 like INVOLVED IN positive regulation of chromosome organization (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN meiotic spindle (ortholog) 10 32875144 32906112 + 30032202 116911364 MODEL JAAIVD010000005;XM_032915289 XP_032771180 testicular spindle-associated protein SHCBP1L protein-coding 626026894 LOC116892086 phosphoglycerate kinase 1-like 2 151829403 151830656 - 22301074;30032202 116892086 MODEL JAAIVD010000001;XM_032893560 XP_032749451 protein-coding 626026897 Psmd3 proteasome 26S subunit, non-ATPase 3 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) 9 55741301 55752945 - 22301074;30032202 116909472 MODEL JAAIVD010000002;XM_032913060;XM_032913061 XP_032768951;XP_032768952 26S proteasome non-ATPase regulatory subunit 3 protein-coding 626026916 LOC116905698 protein FAM149B1-like 1 151657721 151659538 - 116905698 MODEL JAAIVD010000025 pseudo 626026917 LOC116883193 60S ribosomal protein L7-like 14 36776803 36781999 + 116883193 MODEL JAAIVD010000009 pseudo 626026918 LOC116888866 uncharacterized LOC116888866 X 96817966 96972089 + 116888866 MODEL JAAIVD010000014;XR_004386351 ncrna 626026923 LOC116892347 zinc finger protein 30 2 166241660 166250548 - 30032202 116892347 MODEL JAAIVD010000001;XM_032893989 XP_032749880 protein-coding 626026931 LOC116894047 olfactory receptor 52M1 2 102583090 102584043 + 22301074 116894047 MODEL JAAIVD010000001;XM_032895768 XP_032751659 protein-coding 626026934 LOC116902959 proline-rich protein 20E-like 6 57224851 57231308 - 116902959 MODEL JAAIVD010000024;XM_032905284 XP_032761175 protein-coding 626026938 Wfdc3 WAP four-disulfide core domain 3 5 153215496 153228690 + 22301074;30032202 116900769 MODEL JAAIVD010000023;XM_032902480 XP_032758371 WAP four-disulfide core domain protein 3 protein-coding 626026946 LOC116888052 histamine N-methyltransferase-like X 87686194 87686937 + 116888052 MODEL JAAIVD010000014 pseudo 626026947 LOC116892338 zinc finger protein 382 2 165860167 165876462 - 30032202 116892338 MODEL JAAIVD010000001;XM_032893974;XM_032893975;XM_032893976;XM_032893977;XM_032893978 XP_032749865;XP_032749866;XP_032749867;XP_032749868;XP_032749869 protein-coding 626026970 Spns3 SPNS lysolipid transporter 3, sphingosine-1-phosphate (putative) 9 42964417 43022117 + 22301074;30032202 116910205 MODEL JAAIVD010000002;XM_032914068;XM_032914070 XP_032769959;XP_032769961 protein spinster homolog 3;sphingolipid transporter 3 (putative) protein-coding 626026989 Rarres1 retinoic acid receptor responder 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); follicular lymphoma (ortholog); Stomach Neoplasms (ortholog) 3 87724194 87758760 + 30032202 116896803 MODEL JAAIVD010000012;XM_032898276 XP_032754167 retinoic acid receptor responder protein 1 protein-coding 626026999 LOC116885338 cytochrome P450 3A2 16 7896577 7918341 - 22301074;30032202 116885338 MODEL JAAIVD010000004;XM_032886609;XM_032886610 XP_032742500;XP_032742501 protein-coding 626027021 LOC116904483 protein piccolo-like 6 145116066 145142896 - 22301074;30032202 116904483 MODEL JAAIVD010000024;XM_032907285 XP_032763176 protein-coding 626027027 Glis1 GLIS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of cell fate commitment (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 1 47182155 47251493 - 30032202 116899239 MODEL JAAIVD010000025;XM_032900847 XP_032756738 zinc finger protein GLIS1 protein-coding 626027039 Sestd1 SEC14 and spectrin domain containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN calcium channel complex (ortholog); intermediate filament cytoskeleton (ortholog) 5 54528002 54578826 - 116901552 MODEL JAAIVD010000023;XM_032903543 XP_032759434 SEC14 domain and spectrin repeat-containing protein 1 protein-coding 626027060 Mpo myeloperoxidase ENCODES a protein that exhibits heparin binding (ortholog); peroxidase activity (ortholog); INVOLVED IN defense response to fungus (ortholog); hydrogen peroxide catabolic process (ortholog); hypochlorous acid biosynthetic process (ortholog); PARTICIPATES IN etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN azurophil granule (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 9 82995278 83004639 - 22301074;30032202 116909595 MODEL JAAIVD010000002;XM_032913217 XP_032769108 protein-coding 626027077 LOC116900017 beta-lactoglobulin-1A/1C-like 5 11294796 11297617 - 116900017 MODEL JAAIVD010000023 pseudo 626027078 Adap1 ArfGAP with dual PH domains 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 16 13876887 13930297 + 22301074;30032202 116885209 MODEL JAAIVD010000004;XM_032886440 XP_032742331 arf-GAP with dual PH domain-containing protein 1 protein-coding 626027093 LOC116900046 olfactory receptor 1J2-like 5 14731698 14732693 + 22301074 116900046 MODEL JAAIVD010000023;XM_032901840 XP_032757731 protein-coding 626027096 LOC116900361 60S ribosomal protein L23a-like 1 65078763 65082743 - 116900361 MODEL JAAIVD010000025;XR_004387929 pseudo 626027099 Nalf1 NALCN channel auxiliary factor 1 ASSOCIATED WITH diverticulitis (ortholog); Familial Pancreatic Carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN plasma membrane (ortholog) 13 74060285 74575743 + 30032202 116914523 MODEL JAAIVD010000008;XM_032918854;XM_032918855 XP_032774745;XP_032774746 Fam155a family with sequence similarity 155 member A;transmembrane protein FAM155A protein-coding 626027112 Fam174b family with sequence similarity 174 member B INVOLVED IN Golgi organization (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 2 126713793 126757135 - 116891969 MODEL JAAIVD010000001;XM_032893411 XP_032749302 membrane protein FAM174B protein-coding 626027119 LOC116902534 small nucleolar RNA SNORA36 family 5 123973042 123973172 + 116902534 MODEL JAAIVD010000023;XR_004388138 snorna 626027122 Hpca hippocalcin ENCODES a protein that exhibits actin binding (ortholog); calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of phospholipase D activity (ortholog); calcium-mediated signaling (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); Huntington's disease (ortholog); isolated growth hormone deficiency (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 29019702 29029828 + 22301074;30032202 116896289 MODEL JAAIVD010000025;XM_032897375;XM_032897383 XP_032753266;XP_032753274 neuron-specific calcium-binding protein hippocalcin protein-coding 626027133 Pals1 protein associated with LIN7 1, MAGUK p55 family member ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN central nervous system neuron development (ortholog); cerebral cortex development (ortholog); gene expression (ortholog); ASSOCIATED WITH Leber congenital amaurosis (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); cytoplasm (ortholog) 7 92863288 92952250 + 22301074;30032202 116905197 MODEL JAAIVD010000026;XM_032907992;XM_032907993 XP_032763883;XP_032763884 Mpp5 MAGUK p55 subfamily member 5;membrane palmitoylated protein 5;protein associated with LIN7 1, MAGUK family member protein-coding 626027155 LOC116888832 heat shock protein HSP 90-beta-like X 117546483 117548938 + 116888832 MODEL JAAIVD010000014 pseudo 626027156 Ms4a13 membrane spanning 4-domains A13 2 10642034 10683840 - 30032202 116891569 MODEL JAAIVD010000001;XM_032892749 XP_032748640 membrane-spanning 4-domains subfamily A member 13 protein-coding 626027166 LOC116889617 transmembrane protein 106B-like Y 417719 419273 + 116889617 MODEL JAAIVD010000015 pseudo 626027167 Neurog2 neurogenin 2 ENCODES a protein that exhibits E-box binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); Cajal-Retzius cell differentiation (ortholog); cell fate commitment (ortholog); FOUND IN nucleus (ortholog) 3 31710321 31711287 - 22301074 116895322 MODEL JAAIVD010000012;XM_032896631 XP_032752522 neurogenin-2 protein-coding 626027171 LOC116885638 ubiquitin-40S ribosomal protein S27a-like 1 232245887 232246373 - 116885638 MODEL JAAIVD010000025 pseudo 626027172 Ypel5 yippee like 5 FOUND IN ubiquitin ligase complex (ortholog) 7 20377671 20392702 - 116905949 MODEL JAAIVD010000026;XM_032908947;XM_032908948;XM_032908949 XP_032764838;XP_032764839;XP_032764840 protein yippee-like 5 protein-coding 626027185 LOC116890206 keratin, type II cytoskeletal 73 1 261270863 261279020 + 22301074;30032202 116890206 MODEL JAAIVD010000025;XM_032890940 XP_032746831 protein-coding 626027197 Ehmt2 euchromatic histone lysine methyltransferase 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); histone H3K27 methyltransferase activity (ortholog); histone H3K56 methyltransferase activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to cocaine (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); alopecia areata (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 18 7488606 7505316 + 22301074;30032202 116887312 MODEL JAAIVD010000013;XM_032888894;XM_032888895;XM_032888896;XM_032888897;XM_032888898;XM_032888899;XM_032888900;XM_032888902 XP_032744785;XP_032744786;XP_032744787;XP_032744788;XP_032744789;XP_032744790;XP_032744791;XP_032744793 histone-lysine N-methyltransferase EHMT2 protein-coding 626027239 Mtfr1l mitochondrial fission regulator 1 like FOUND IN mitochondrion (ortholog) 1 23717104 23727047 + 30032202 116894693 MODEL JAAIVD010000025;XM_032896395;XM_032896401;XM_032896404;XM_032896412 XP_032752286;XP_032752292;XP_032752295;XP_032752303 mitochondrial fission regulator 1-like protein-coding 626027258 Rgma repulsive guidance molecule BMP co-receptor a ENCODES a protein that exhibits coreceptor activity (ortholog); signaling receptor binding (ortholog); transferrin receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of collateral sprouting (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH middle cerebral artery infarction (ortholog); multiple sclerosis (ortholog); Penetrating Eye Injuries (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) 2 127078891 127123200 - 30032202 116891972 MODEL JAAIVD010000001;XM_032893414 XP_032749305 repulsive guidance molecule A protein-coding 626027266 LOC116883529 protein crumbs homolog 1-like 1 202327084 202331095 - 116883529 MODEL JAAIVD010000025 pseudo 626027267 LOC116894585 vomeronasal type-1 receptor 4-like 2 180401249 180402165 - 22301074;30032202 116894585 MODEL JAAIVD010000001;XM_032896304 XP_032752195 protein-coding 626027270 Cisd3 CDGSH iron sulfur domain 3 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); metal ion binding (ortholog); INVOLVED IN protein maturation (ortholog); FOUND IN mitochondrion (ortholog) 9 56695204 56698542 - 22301074 116908639 MODEL JAAIVD010000002;XM_032911897 XP_032767788 CDGSH iron-sulfur domain-containing protein 3, mitochondrial protein-coding 626027277 Rtn1 reticulon 1 INVOLVED IN negative regulation of amyloid-beta formation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 86258215 86462438 - 30032202 116905153 MODEL JAAIVD010000026;XM_032907922;XM_032907924 XP_032763813;XP_032763815 reticulon-1 protein-coding 626027293 LOC116906885 olfactory receptor 8B12-like 8 72786155 72787084 + 22301074;30032202 116906885 MODEL JAAIVD010000027;XM_032909799 XP_032765690 protein-coding 626027296 Slc25a37 solute carrier family 25 member 37 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN iron import into the mitochondrion (ortholog); positive regulation of hemoglobin biosynthetic process (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH anemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 12 54826439 54868254 + 30032202 116913339 MODEL JAAIVD010000007;XM_032917490;XM_032917492 XP_032773381;XP_032773383 mitoferrin-1 protein-coding 626027307 LOC116906743 uncharacterized LOC116906743 8 46666004 46668642 - 116906743 MODEL JAAIVD010000027;XR_004388766 ncrna 626027311 LOC116908201 A-kinase anchor protein 8-like 8 62449046 62450897 - 116908201 MODEL JAAIVD010000027 pseudo 626027312 LOC116890106 uncharacterized LOC116890106 1 233359354 233364919 - 116890106 MODEL JAAIVD010000025;XR_004386528 ncrna 626027317 Lyzl4 lysozyme like 4 ENCODES a protein that exhibits lysozyme activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); defense response to Gram-negative bacterium (ortholog); fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular space (ortholog); sperm flagellum (ortholog) 8 112742894 112748730 - 22301074;30032202 116907273 MODEL JAAIVD010000027;XM_032910227 XP_032766118 lysozyme-like protein 4 protein-coding 626027325 Pla2r1 phospholipase A2 receptor 1 ENCODES a protein that exhibits phospholipase A2 inhibitor activity (ortholog); phospholipase binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN negative regulation of arachidonate secretion (ortholog); oxidative stress-induced premature senescence (ortholog); positive regulation of arachidonate secretion (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); autistic disorder (ortholog); kidney disease (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 5 38088370 38218614 - 30032202 116900184 MODEL JAAIVD010000023;XM_032901940 XP_032757831 secretory phospholipase A2 receptor protein-coding 626027359 LOC116902702 taste receptor type 2 member 140 6 15762748 15763686 + 22301074;30032202 116902702 MODEL JAAIVD010000024;XM_032905056 XP_032760947 protein-coding 626027362 Gabrr2 gamma-aminobutyric acid type A receptor subunit rho2 ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN gamma-aminobutyric acid signaling pathway (ortholog); visual perception (ortholog); ASSOCIATED WITH autistic disorder (ortholog); liver disease (ortholog); sensorineural hearing loss (ortholog); FOUND IN GABA-ergic synapse (ortholog); intracellular vesicle (ortholog) 1 109947711 109984300 - 22301074;30032202 116888946 MODEL JAAIVD010000025;XM_032890180 XP_032746071 gamma-aminobutyric acid receptor subunit rho-2 protein-coding 626027375 Prss36 serine protease 36 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); FOUND IN cytoplasm (ortholog) 2 73956018 73972268 + 22301074 116891446 MODEL JAAIVD010000001;XM_032892511;XM_032892512 XP_032748402;XP_032748403 polyserase-2 protein-coding 626027396 LOC116911880 U6 spliceosomal RNA 10 30706003 30706109 - 116911880 MODEL JAAIVD010000005;XR_004389394 snrna 626027399 Gpatch4 G-patch domain containing 4 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 3 65508269 65518628 - 22301074;30032202 116896703 MODEL JAAIVD010000012;XM_032898110;XM_032898111 XP_032754001;XP_032754002 G patch domain-containing protein 4 protein-coding 626027415 LOC116890368 U6 spliceosomal RNA 1 33603440 33603539 + 116890368 MODEL JAAIVD010000025 pseudo 626027416 Glyatl3 glycine-N-acyltransferase like 3 ENCODES a protein that exhibits glycine N-acyltransferase activity (ortholog) 4 94969348 94979789 + 22301074;30032202 116898088 MODEL JAAIVD010000003;XM_032899474 XP_032755365 glycine N-acyltransferase-like protein 3 protein-coding 626027424 Psma7 proteasome 20S subunit alpha 7 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); proteasome complex (ortholog) 5 157122572 157129966 - 22301074;30032202;7578256 116902400 MODEL D30804;JAAIVD010000023;XM_032904924 BAA06463;XP_032760815 proteasome subunit RC6-1;proteasome subunit alpha type-7 protein-coding 626027435 LOC116897480 small nucleolar RNA SNORD22 3 112515924 112516049 + 116897480 MODEL JAAIVD010000012;XR_004387504 snorna 626027438 Gle1 GLE1 RNA export mediator ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH Congenital Arthrogryposis with Anterior Horn Cell Disease (ortholog); genetic disease (ortholog); lethal congenital contracture syndrome 1 (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 6773438 6798032 - 22301074;30032202 116901205 MODEL JAAIVD010000023;XM_032902914 XP_032758805 nucleoporin GLE1 protein-coding 626027458 LOC116888703 protein Jade-3-like X 3370096 3411644 + 30032202 116888703 MODEL JAAIVD010000014;XM_032889991;XM_032889992 XP_032745882;XP_032745883 protein-coding 626027469 Itgav integrin subunit alpha V ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); collagen binding (ortholog); extracellular matrix binding (ortholog); INVOLVED IN angiogenesis (ortholog); apolipoprotein A-I-mediated signaling pathway (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN integrin mediated signaling pathway; platelet-derived growth factor signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); Alveolar Bone Loss (ortholog); FOUND IN alphav-beta3 integrin-HMGB1 complex (ortholog); alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); cell surface (ortholog) 5 61209381 61285001 + 22301074;30032202 116901576 MODEL JAAIVD010000023;XM_032903573;XM_032903574 XP_032759464;XP_032759465 integrin alpha-V protein-coding 626027505 Alyref Aly/REF export factor ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); molecular adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 9 63425339 63429124 + 30032202 116908804 MODEL JAAIVD010000002;XM_032912205 XP_032768096 THO complex subunit 4 protein-coding 626027515 Mamdc2 MAM domain containing 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); interstitial matrix (ortholog) 2 23358526 23510309 - 22301074 116891040 MODEL JAAIVD010000001;XM_032891724 XP_032747615 MAM domain-containing protein 2 protein-coding 626027533 Tmem245 transmembrane protein 245 1 94672922 94738966 + 116901699 MODEL JAAIVD010000025;XM_032903831;XM_032903839;XM_032903845 XP_032759722;XP_032759730;XP_032759736 protein-coding 626027558 LOC116908352 small nucleolar RNA SNORA70 8 18543097 18543232 - 116908352 MODEL JAAIVD010000027;XR_004388903 snorna 626027561 LOC116902477 U6 spliceosomal RNA 5 10516857 10516963 + 116902477 MODEL JAAIVD010000023;XR_004388095 snrna 626027564 Qtman queuosine-tRNA mannosyltransferase ENCODES a protein that exhibits tRNA-queuosine(34) beta-mannosyltransferase activity (ortholog); INVOLVED IN regulation of translation (ortholog); tRNA modification (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 22233730 22851900 - 22301074 116901385 MODEL JAAIVD010000023;XM_032903251;XM_032903252;XM_032903253 XP_032759142;XP_032759143;XP_032759144 Gtdc1 glycosyltransferase like domain containing 1;glycosyltransferase-like domain-containing protein 1 protein-coding 626027583 Arhgap11b Rho GTPase activating protein 11B ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); L-glutamine catabolic process (ortholog); negative regulation of mitochondrial membrane permeability (ortholog); FOUND IN mitochondrial matrix (ortholog) 11 1857976 1860623 + 22301074 116912640 MODEL JAAIVD010000006;XM_032916759 XP_032772650 rho GTPase-activating protein 11B protein-coding 626027587 LOC116900519 60S ribosomal protein L17-like 5 82783425 82784029 - 116900519 MODEL JAAIVD010000023 pseudo 626027588 LOC116893904 60S ribosomal protein L8-like 2 75146524 75147328 + 22301074;30032202 116893904 MODEL JAAIVD010000001;XM_032895628 XP_032751519 protein-coding 626027592 LOC116906959 olfactory receptor 150-like 8 82654631 82655566 + 22301074;30032202 116906959 MODEL JAAIVD010000027;XM_032909880 XP_032765771 protein-coding 626027595 LOC116913020 U1 spliceosomal RNA 11 81477659 81477806 + 116913020 MODEL JAAIVD010000006 pseudo 626027596 Cadps2 calcium dependent secretion activator 2 INVOLVED IN cellular response to starvation (ortholog); hematopoietic stem cell homeostasis (ortholog); positive regulation of exocytosis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 6 115451604 115977172 + 30032202 116904038 MODEL JAAIVD010000024;XM_032906872;XM_032906873;XM_032906874;XM_032906875;XM_032906876;XM_032906877;XM_032906878;XM_032906879;XM_032906880;XM_032906881;XM_032906882;XM_032906883;XM_032906884;XM_032906885;XM_032906886;XM_032906887;XM_032906888;XM_032906889;XM_032906891;XM_032906892;XM_032906893;XM_032906894;XM_032906895 XP_032762763;XP_032762764;XP_032762765;XP_032762766;XP_032762767;XP_032762768;XP_032762769;XP_032762770;XP_032762771;XP_032762772;XP_032762773;XP_032762774;XP_032762775;XP_032762776;XP_032762777;XP_032762778;XP_032762779;XP_032762780;XP_032762782;XP_032762783;XP_032762784;XP_032762785;XP_032762786 calcium-dependent secretion activator 2 protein-coding 626027656 Upf3a UPF3A regulator of nonsense mediated mRNA decay ENCODES a protein that exhibits mRNA binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN exon-exon junction complex (ortholog); neuron projection (ortholog); nucleoplasm (ortholog) 13 69928008 69938548 - 30032202 116914722 MODEL JAAIVD010000008;XM_032919152 XP_032775043 regulator of nonsense transcripts 3A protein-coding 626027669 LOC116902090 protein S100-A11-like 5 129938261 129938557 - 22301074;30032202 116902090 MODEL JAAIVD010000023;XM_032904388 XP_032760279 protein-coding 626027672 LOC116889476 small nucleolar RNA SNORA42/SNORA80 family X 106201023 106201156 - 116889476 MODEL JAAIVD010000014;XR_004386428 snorna 626027675 LOC116885962 vomeronasal type-1 receptor 4-like 1 214956673 214957677 - 22301074;30032202 116885962 MODEL JAAIVD010000025;XM_032887315 XP_032743206 protein-coding 626027679 LOC116910398 WAP four-disulfide core domain protein 18-like 9 87015792 87017440 - 116910398 MODEL JAAIVD010000002 pseudo 626027680 LOC116910756 small nucleolar RNA U3 9 83329944 83330158 - 116910756 MODEL JAAIVD010000002;XR_004389267 snorna 626027683 Satb1 SATB homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN activated T cell proliferation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autism spectrum disorder (ortholog); DEVELOPMENTAL DELAY WITH DYSMORPHIC FACIES AND DENTAL ANOMALIES (ortholog); FOUND IN chromatin (ortholog); heterochromatin (ortholog); nuclear body (ortholog) 4 88943825 89032782 - 30032202 116899220 MODEL JAAIVD010000003;XM_032900817;XM_032900818;XM_032900819;XM_032900820;XM_032900821;XM_032900822 XP_032756708;XP_032756709;XP_032756710;XP_032756711;XP_032756712;XP_032756713 DNA-binding protein SATB1 protein-coding 626027715 Oser1 oxidative stress responsive serine rich 1 INVOLVED IN cellular response to hydrogen peroxide (ortholog); FOUND IN nucleus (ortholog) 5 154559188 154574440 + 30032202 116902384 MODEL JAAIVD010000023;XM_032904897 XP_032760788 oxidative stress-responsive serine-rich protein 1 protein-coding 626027722 LOC116911177 60S ribosomal protein L13-like 10 35885739 35886453 - 116911177 MODEL JAAIVD010000005;XR_004389317 pseudo 626027725 Prune1 prune exopolyphosphatase 1 ENCODES a protein that exhibits phosphatase activity (ortholog); tubulin binding (ortholog); INVOLVED IN regulation of microtubule polymerization (ortholog); regulation of neurogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, HYPOTONIA, AND VARIABLE BRAIN ANOMALIES (ortholog); FOUND IN cytosol (ortholog) 3 61964967 61993631 + 22301074;30032202 116896558 MODEL JAAIVD010000012;XM_032897751;XM_032897752;XM_032897753 XP_032753642;XP_032753643;XP_032753644 exopolyphosphatase PRUNE1 protein-coding 626027742 Ascc2 activating signal cointegrator 1 complex subunit 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); rescue of stalled ribosome (ortholog); ribosome disassembly (ortholog); FOUND IN cytosolic ribosome (ortholog); DNA repair complex (ortholog); nucleus (ortholog) 11 73611310 73656292 + 22301074;30032202 116912177 MODEL JAAIVD010000006;XM_032916108 XP_032771999 protein-coding 626027766 C14H6orf52 chromosome 14 C6orf52 homolog 14 59981676 59990753 - 30032202 116883612 MODEL JAAIVD010000009;XM_032884802 XP_032740693 putative uncharacterized protein C6orf52 homolog protein-coding 626027773 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889657 MODEL JAAIVD010000045 trna 626027774 Ccdc34 coiled-coil domain containing 34 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure (ortholog); spermatogenic failure 76 (ortholog); FOUND IN sperm midpiece (ortholog) 5 88317923 88353299 + 116901730 MODEL JAAIVD010000023;XM_032903869 XP_032759760 coiled-coil domain-containing protein 34 protein-coding 626027784 Naa20 N-alpha-acetyltransferase 20, NatB catalytic subunit INVOLVED IN N-terminal peptidyl-aspartic acid acetylation (ortholog); N-terminal peptidyl-glutamic acid acetylation (ortholog); N-terminal peptidyl-glutamine acetylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 73 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatB complex (ortholog) 5 125542385 125556833 + 30032202 116902058 MODEL JAAIVD010000023;XM_032904348;XM_032904349 XP_032760239;XP_032760240 N-alpha-acetyltransferase 20 protein-coding 626027798 LOC116913429 granzyme E-like 12 68844678 68855012 + 22301074;30032202 116913429 MODEL JAAIVD010000007;XM_032917621 XP_032773512 protein-coding 626027808 LOC116902499 U6 spliceosomal RNA 5 115661653 115661755 - 116902499 MODEL JAAIVD010000023;XR_004388112 snrna 626027811 LOC116900625 uncharacterized LOC116900625 5 107982736 107983624 + 116900625 MODEL JAAIVD010000023;XR_004387940 ncrna 626027815 Caprin2 caprin family member 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of dendrite morphogenesis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 6484047 6537618 - 30032202 116903109 MODEL JAAIVD010000024;XM_032905433;XM_032905436;XM_032905437;XM_032905438;XM_032905439;XM_032905440;XM_032905441;XM_032905442;XM_032905443 XP_032761324;XP_032761327;XP_032761328;XP_032761329;XP_032761330;XP_032761331;XP_032761332;XP_032761333;XP_032761334 caprin-2 protein-coding 626027853 Il11 interleukin 11 ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-11 receptor binding (ortholog); INVOLVED IN interleukin-11-mediated signaling pathway (ortholog); negative regulation of endothelial cell apoptotic process (ortholog); negative regulation of hormone secretion (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cystitis (ortholog); Edema (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 2 177347995 177353263 - 30032202 116894543 MODEL JAAIVD010000001;XM_032896252 XP_032752143 interleukin-11 protein-coding 626027862 Erich3 glutamate rich 3 INVOLVED IN cilium assembly (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); cytoplasm (ortholog) 3 6694312 6789308 - 116895211 MODEL JAAIVD010000012;XM_032896544 XP_032752435 glutamate-rich protein 3 protein-coding 626027880 LOC116892479 CD177 antigen-like 2 169948621 169970181 + 30032202 116892479 MODEL JAAIVD010000001;XM_032894208 XP_032750099 protein-coding 626027901 LOC116887768 U7 small nuclear RNA 18 35015877 35015938 + 116887768 MODEL JAAIVD010000013;XR_004386266 snrna 626027904 LOC116889564 U4 spliceosomal RNA X 103982828 103982959 - 116889564 MODEL JAAIVD010000014 pseudo 626027905 Mapkapk2 MAPK activated protein kinase 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); DNA damage response (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; p38 MAPK signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 10 4711512 4759968 + 22301074;30032202 116911158 MODEL JAAIVD010000005;XM_032915020 XP_032770911 MAP kinase-activated protein kinase 2 protein-coding 626027919 Plcg2 phospholipase C gamma 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phosphorylation-dependent protein binding (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN antifungal innate immune response (ortholog); B cell activation (ortholog); B cell differentiation (ortholog); PARTICIPATES IN erythropoietin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autoinflammation, antibody deficiency, and immune dysregulation syndrome (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular vesicle (ortholog) 17 37203389 37284964 + 22301074;30032202 116886170 MODEL JAAIVD010000011;XM_032887542 XP_032743433 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-2 protein-coding 626027953 Chsy1 chondroitin sulfate synthase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glycosyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) 2 134185824 134246947 - 22301074;30032202 116891995 MODEL JAAIVD010000001;XM_032893449 XP_032749340 protein-coding 626027960 LOC116895880 RNA-binding protein EWS-like 3 109403707 109405091 + 116895880 MODEL JAAIVD010000012 pseudo 626027961 Morn3 MORN repeat containing 3 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of signal transduction by p53 class mediator (ortholog); signal transduction by p53 class mediator (ortholog) 16 30776779 30789034 + 116885800 MODEL JAAIVD010000004;XM_032887131 XP_032743022 MORN repeat-containing protein 3 protein-coding 626027970 Tceal7 transcription elongation factor A like 7 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 88232984 88234368 + 116888607 MODEL JAAIVD010000014;XM_032889907 XP_032745798 transcription elongation factor A protein-like 7 protein-coding 626027976 Arhgdib Rho GDP dissociation inhibitor beta ENCODES a protein that exhibits GTPase activity (ortholog); Rho GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to redox state (ortholog); negative regulation of trophoblast cell migration (ortholog); regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytosol (ortholog) 6 12489562 12507699 + 22301074;30032202 116903147 MODEL JAAIVD010000024;XM_032905511;XM_032905512;XM_032905513 XP_032761402;XP_032761403;XP_032761404 rho GDP-dissociation inhibitor 2 protein-coding 626027993 LOC116889082 prothymosin alpha-like 1 117880665 117880938 + 116889082 MODEL JAAIVD010000025 pseudo 626027994 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50244874 50244944 + 116911904 MODEL JAAIVD010000005 trna 626027995 LOC116908137 G2/mitotic-specific cyclin-B1-like 8 115045230 115046351 - 116908137 MODEL JAAIVD010000027 pseudo 626027996 LOC116885864 cytochrome P450 3A2-like 16 7707073 7723907 - 22301074;30032202 116885864 MODEL JAAIVD010000004;XM_032887190 XP_032743081 protein-coding 626028005 Acsl3 acyl-CoA synthetase long chain family member 3 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); long-chain fatty acid import into cell (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH asthma (ortholog); breast cancer (ortholog); Experimental Allergic Asthma (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lipid droplet (ortholog) 4 151871582 151918959 + 30032202 116899546 MODEL JAAIVD010000003;XM_032901437;XM_032901438 XP_032757328;XP_032757329 long-chain-fatty-acid--CoA ligase 3 protein-coding 626028027 Zmym2 zinc finger MYM-type containing 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH CAKUT (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); PML body (ortholog) 12 67861532 67935436 - 22301074 116913704 MODEL JAAIVD010000007;XM_032917999 XP_032773890 zinc finger MYM-type protein 2 protein-coding 626028056 LOC116914306 cytochrome b-c1 complex subunit 6, mitochondrial-like 13 34464782 34468697 + 116914306 MODEL JAAIVD010000008 pseudo 626028057 LOC116901573 heat shock cognate 71 kDa protein-like 5 60338750 60340168 - 116901573 MODEL JAAIVD010000023 pseudo 626028058 LOC116884092 small nucleolar RNA SNORA17 14 37763940 37764070 + 116884092 MODEL JAAIVD010000009;XR_004385831 snorna 626028061 LOC116903299 vomeronasal type-2 receptor 26-like 6 23842651 23885115 - 22301074;30032202 116903299 MODEL JAAIVD010000024;XM_032905722 XP_032761613 protein-coding 626028069 Tbc1d16 TBC1 domain family member 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); regulation of receptor recycling (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) 9 64802752 64885253 + 30032202 116908784 MODEL JAAIVD010000002;XM_032912168;XM_032912169;XM_032912170 XP_032768059;XP_032768060;XP_032768061 protein-coding 626028090 Esx1 ESX homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer morphogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) X 88743270 88747464 + 22301074;30032202 116888350 MODEL JAAIVD010000014;XM_032889619 XP_032745510 homeobox protein ESX1 protein-coding 626028098 Oip5 Opa interacting protein 5 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN Cajal body (ortholog); CENP-A recruiting complex (ortholog); chromatin (ortholog) 5 97780660 97789913 - 30032202 116901812 MODEL JAAIVD010000023;XM_032903972 XP_032759863 protein Mis18-beta protein-coding 626028108 LOC116888755 protein FAM133B-like X 8600127 8602067 - 116888755 MODEL JAAIVD010000014;XM_032890049 XP_032745940 protein-coding 626028113 Ccdc136 coiled-coil domain containing 136 INVOLVED IN acrosome assembly (ortholog); single fertilization (ortholog); spermatogenesis (ortholog); FOUND IN acrosomal membrane (ortholog) 6 110139159 110168486 - 30032202 116904018 MODEL JAAIVD010000024;XM_032906838;XM_032906839;XM_032906840;XM_032906842;XM_032906843;XM_032906844;XM_032906845;XM_032906846 XP_032762729;XP_032762730;XP_032762731;XP_032762733;XP_032762734;XP_032762735;XP_032762736;XP_032762737 coiled-coil domain-containing protein 136 protein-coding 626028152 Timm10 translocase of inner mitochondrial membrane 10 ENCODES a protein that exhibits membrane insertase activity (ortholog); protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); rhabdomyosarcoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) 5 62210710 62214086 + 30032202 116901590 MODEL JAAIVD010000023;XM_032903606;XM_032903607 XP_032759497;XP_032759498 mitochondrial import inner membrane translocase subunit Tim10 protein-coding 626028161 Brip1 BRCA1 interacting DNA helicase 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); catalytic activity, acting on a nucleic acid (ortholog); chromatin binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); cellular response to vitamin (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Alzheimer's disease (ortholog); Bone Metastasis (ortholog); FOUND IN BRCA1-B complex (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) 9 84565403 84686961 + 22301074;30032202 116910376 MODEL JAAIVD010000002;XM_032914222 XP_032770113 BRCA1 interacting helicase 1;BRCA1 interacting protein C-terminal helicase 1;Fanconi anemia group J protein protein-coding 626028183 Nos3 nitric oxide synthase 3 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); arginine binding (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel diameter maintenance (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; eicosanoid signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute chest syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN apical part of cell (ortholog); caveola (ortholog); cytoplasm (ortholog) 6 153557887 153577422 + 22301074;30032202 116904201 MODEL JAAIVD010000024;XM_032907116 XP_032763007 nitric oxide synthase, endothelial protein-coding 626028213 Trappc5 trafficking protein particle complex subunit 5 FOUND IN TRAPP complex (ortholog) 16 1603166 1606813 + 30032202 116885580 MODEL JAAIVD010000004;XM_032886875;XM_032886876 XP_032742766;XP_032742767 trafficking protein particle complex 5 protein-coding 626028224 Edf1 endothelial differentiation related factor 1 ENCODES a protein that exhibits TFIID-class transcription factor complex binding (ortholog); transcription coactivator activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 5 11616772 11621042 - 22301074;30032202 116901291 MODEL JAAIVD010000023;XM_032903080 XP_032758971 endothelial differentiation-related factor 1 protein-coding 626028233 Ivl involucrin INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); regulation of antibacterial peptide production (ortholog); ASSOCIATED WITH Skin Neoplasms (ortholog); squamous cell carcinoma (ortholog); FOUND IN centrosome (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) 3 1510640 1512559 + 22301074 116895262 MODEL JAAIVD010000012;XM_032896580 XP_032752471 protein-coding 626028237 Cfap157 cilia and flagella associated protein 157 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); FOUND IN ciliary basal body (ortholog) 5 2856218 2863517 + 30032202 116901135 MODEL JAAIVD010000023;XM_032902736 XP_032758627 cilia- and flagella-associated protein 157 protein-coding 626028250 LOC116893280 60 kDa heat shock protein, mitochondrial-like 2 146928608 146931912 - 116893280 MODEL JAAIVD010000001 pseudo 626028251 LOC116902582 small nucleolar RNA SNORA17 5 82487044 82487173 + 116902582 MODEL JAAIVD010000023;XR_004388174 snorna 626028254 Sars1 seryl-tRNA synthetase 1 ENCODES a protein that exhibits enzyme binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); coronary artery disease (ortholog); HUPRA Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 3 49813397 49830769 + 22301074;30032202 116896361 MODEL JAAIVD010000012;XM_032897468;XM_032897469 XP_032753359;XP_032753360 serine--tRNA ligase, cytoplasmic protein-coding 626028272 Prkab1 protein kinase AMP-activated non-catalytic subunit beta 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); nail development (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH anuria (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 16 37808381 37818711 + 30032202 116885430 MODEL JAAIVD010000004;XM_032886716 XP_032742607 5'-AMP-activated protein kinase subunit beta-1 protein-coding 626028283 LOC116894652 uncharacterized LOC116894652 2 202953538 202956466 + 116894652 MODEL JAAIVD010000001;XR_004387033 ncrna 626028289 Rgsl1 regulator of G protein signaling like 1 10 33221050 33272027 - 116911206 MODEL JAAIVD010000005;XM_032915081;XM_032915082 XP_032770972;XP_032770973 regulator of G-protein signaling protein-like protein-coding 626028318 LOC116905696 uncharacterized LOC116905696 7 59080605 59120179 - 116905696 MODEL JAAIVD010000026;XR_004388561 ncrna 626028324 Nedd4 NEDD4 E3 ubiquitin protein ligase ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); channel inhibitor activity (ortholog); enzyme binding (ortholog); INVOLVED IN adaptive immune response (ortholog); blood vessel morphogenesis (ortholog); cellular response to UV (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Keloid (ortholog); muscular atrophy (ortholog); FOUND IN cell cortex (ortholog); chromatin (ortholog); cytoplasm (ortholog) 8 66997698 67082612 + 22301074;30032202 116907730 MODEL JAAIVD010000027;XM_032910855;XM_032910856 XP_032766746;XP_032766747 E3 ubiquitin-protein ligase NEDD4 protein-coding 626028360 LOC116900952 60S ribosomal protein L13-like 5 92230498 92234954 - 116900952 MODEL JAAIVD010000023 pseudo 626028361 Usp46 ubiquitin specific peptidase 46 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); behavioral fear response (ortholog); behavioral response to ethanol (ortholog); ASSOCIATED WITH Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 11 30788489 30856956 - 22301074;30032202 116911948 MODEL JAAIVD010000006;XM_032915861 XP_032771752 ubiquitin carboxyl-terminal hydrolase 46 protein-coding 626028374 C11H2orf74 chromosome 11 C2orf74 homolog ASSOCIATED WITH visceral heterotaxy (ortholog) 11 93420111 93423117 + 116912771 MODEL JAAIVD010000006;XM_032916922 XP_032772813 uncharacterized protein C2orf74 homolog protein-coding 626028384 LOC116889628 LIM domain-containing protein 2-like Y 1855548 1856079 - 116889628 MODEL JAAIVD010000015 pseudo 626028385 Kng1 kininogen 1 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); hormone activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of blood coagulation (ortholog); negative regulation of cell adhesion (ortholog); negative regulation of proteolysis (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; kinin signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acquired angioedema (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog) 4 7674382 7698500 - 22301074;30032202 116897812 MODEL JAAIVD010000003;XM_032899226;XM_032899227;XM_032899228 XP_032755117;XP_032755118;XP_032755119 kininogen-1 protein-coding 626028408 LOC116893494 olfactory receptor 10A3-like 2 182609528 182610517 + 22301074 116893494 MODEL JAAIVD010000001;XM_032895239 XP_032751130 protein-coding 626028411 LOC116895991 60S ribosomal protein L13-like 3 166546798 166547286 + 116895991 MODEL JAAIVD010000012 pseudo 626028412 Gart phosphoribosylglycinamide formyltransferase, phosphoribosylglycinamide synthetase, phosphoribosylaminoimidazole synthetase ENCODES a protein that exhibits phosphoribosylamine-glycine ligase activity (ortholog); phosphoribosylformylglycinamidine cyclo-ligase activity (ortholog); phosphoribosylglycinamide formyltransferase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Down syndrome (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytosol (ortholog) 4 52950032 52975297 + 22301074;30032202 116898988 MODEL JAAIVD010000003;XM_032900420 XP_032756311 trifunctional purine biosynthetic protein adenosine-3 protein-coding 626028438 LOC116883861 uncharacterized LOC116883861 14 42974190 42979135 + 116883861 MODEL JAAIVD010000009;XR_004385799 ncrna 626028442 LOC116893402 carcinoembryonic antigen-related cell adhesion molecule 15-like 2 172406421 172412433 + 30032202 116893402 MODEL JAAIVD010000001;XM_032895188 XP_032751079 protein-coding 626028448 LOC116911828 small nucleolar RNA SNORA17 10 33516052 33516183 - 116911828 MODEL JAAIVD010000005;XR_004389364 snorna 626028451 LOC116908403 small nucleolar RNA SNORA17 8 54717372 54717496 + 116908403 MODEL JAAIVD010000027 pseudo 626028452 LOC116890607 small nucleolar RNA SNORA79 1 155876020 155876156 - 116890607 MODEL JAAIVD010000025;XR_004386758 snorna 626028455 LOC116884856 cytochrome b5-like 15 20854114 20854518 - 22301074;30032202 116884856 MODEL JAAIVD010000010;XM_032886099 XP_032741990 protein-coding 626028458 LOC116897905 dnaJ homolog subfamily B member 6-like 4 33768596 33769436 - 116897905 MODEL JAAIVD010000003 pseudo 626028459 LOC116901333 uncharacterized LOC116901333 5 12254507 12256281 - 116901333 MODEL JAAIVD010000023;XR_004387977 ncrna 626028463 Esco2 establishment of sister chromatid cohesion N-acetyltransferase 2 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); INVOLVED IN chromosome segregation (ortholog); double-strand break repair (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Juberg-Hayward Syndrome (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); chromocenter (ortholog) 12 58611592 58629439 + 30032202 116913760 MODEL JAAIVD010000007;XM_032918068 XP_032773959 N-acetyltransferase ESCO2 protein-coding 626028478 Vps33b VPS33B late endosome and lysosome associated ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); collagen fibril organization (ortholog); collagen metabolic process (ortholog); ASSOCIATED WITH ARC syndrome (ortholog); arthrogryposis multiplex congenita (ortholog); arthrogryposis, renal dysfunction, and cholestasis 1 (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) 2 119956180 119978451 - 22301074;30032202 116891924 MODEL JAAIVD010000001;XM_032893356 XP_032749247 vacuolar protein sorting-associated protein 33B protein-coding 626028505 LOC116910293 retinol dehydrogenase 16-like 1 206226690 206238205 + 22301074 116910293 MODEL JAAIVD010000025;XM_032914166 XP_032770057 protein-coding 626028513 LOC116906296 uncharacterized LOC116906296 1 156123489 156139942 + 116906296 MODEL JAAIVD010000025;XR_004388590 ncrna 626028518 LOC116904647 U6 spliceosomal RNA 6 148843146 148843252 - 116904647 MODEL JAAIVD010000024;XR_004388350 snrna 626028521 LOC116897090 heterogeneous nuclear ribonucleoprotein A3-like 1 87319056 87321777 + 116897090 MODEL JAAIVD010000025 pseudo 626028522 Actbl2 actin beta like 2 FOUND IN glutamatergic synapse (ortholog); synapse (ortholog) 3 185774865 185777602 - 30032202 116895656 MODEL JAAIVD010000012;XM_032896862;XM_032896863 XP_032752753;XP_032752754 beta-actin-like protein 2 protein-coding 626028530 LOC116889412 ubiquitin domain-containing protein 2-like X 13126232 13126934 - 116889412 MODEL JAAIVD010000014 pseudo 626028531 Myrfl myelin regulatory factor like 1 194926350 195012618 - 22301074;30032202 116914963 MODEL JAAIVD010000025;XM_032919398 XP_032775289 myelin regulatory factor-like protein protein-coding 626028559 Pdzd8 PDZ domain containing 8 INVOLVED IN cytoskeleton organization (ortholog); mitochondrial calcium ion homeostasis (ortholog); mitochondrion-endoplasmic reticulum membrane tethering (ortholog); ASSOCIATED WITH Intellectual Developmental Disorder with Autism and Dysmorphic Facies (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 2 56762853 56822224 + 22301074;30032202 116891314 MODEL JAAIVD010000001;XM_032892228 XP_032748119 PDZ domain-containing protein 8 protein-coding 626028568 Bnip1 BCL2 interacting protein 1 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process in response to mitochondrial fragmentation (ortholog); endoplasmic reticulum membrane fusion (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Down syndrome (ortholog); spondyloepiphyseal dysplasia congenita (ortholog); FOUND IN COPI-coated vesicle (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 9 4655981 4668445 - 22301074;30032202 116909894 MODEL JAAIVD010000002;XM_032913641 XP_032769532 vesicle transport protein SEC20 protein-coding 626028578 Foxs1 forkhead box S1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 5 132249052 132250330 - 30032202 116900708 MODEL JAAIVD010000023;XM_032902411 XP_032758302 forkhead box protein S1 protein-coding 626028583 LOC116902952 vomeronasal type-1 receptor A14-like 6 124164731 124165577 - 22301074;30032202 116902952 MODEL JAAIVD010000024;XM_032905277 XP_032761168 protein-coding 626028587 LOC116915194 small nucleolar RNA SNORA15 13 60928424 60928541 + 116915194 MODEL JAAIVD010000008 pseudo 626028588 Tyw2 tRNA wybutosine-synthesizing protein 2 1 233395883 233397939 + 30032202 116911808 MODEL JAAIVD010000025;XM_032915802 XP_032771693 Trmt12 tRNA methyltransferase 12 homolog;tRNA wybutosine-synthesizing protein 2 homolog protein-coding 626028593 LOC116889342 queuine tRNA-ribosyltransferase accessory subunit 2-like X 53725968 53727214 + 116889342 MODEL JAAIVD010000014 pseudo 626028594 LOC116890341 U6 spliceosomal RNA 1 254505231 254505342 + 116890341 MODEL JAAIVD010000025;XR_004386563 snrna 626028597 Foxo6 forkhead box O6 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN memory (ortholog); positive regulation of dendritic spine development (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 36698919 36719005 + 30032202 116897330 MODEL JAAIVD010000025;XM_032899089;XM_032899095;XM_032899101 XP_032754980;XP_032754986;XP_032754992 forkhead box protein O6 protein-coding 626028608 Lyg2 lysozyme g2 ENCODES a protein that exhibits lysozyme activity (ortholog); FOUND IN extracellular region (ortholog) 4 114106971 114115855 - 22301074;30032202 116898142 MODEL JAAIVD010000003;XM_032899519 XP_032755410 lysozyme g-like protein 2 protein-coding 626028615 LOC116894756 activated RNA polymerase II transcriptional coactivator p15-like 2 170641975 170644115 + 116894756 MODEL JAAIVD010000001 pseudo 626028616 Kidins220 kinase D interacting substrate 220 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); dendrite morphogenesis (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); genetic disease (ortholog); Kabuki Syndrome 1 (ortholog); FOUND IN glutamatergic synapse (ortholog); late endosome (ortholog); postsynapse (ortholog) 7 38579433 38658193 + 22301074 116904919 MODEL JAAIVD010000026;XM_032907530;XM_032907531;XM_032907532;XM_032907533;XM_032907534;XM_032907535;XM_032907536;XM_032907537;XM_032907538;XM_032907539;XM_032907541;XM_032907542;XM_032907543;XM_032907544;XM_032907545;XM_032907546 XP_032763421;XP_032763422;XP_032763423;XP_032763424;XP_032763425;XP_032763426;XP_032763427;XP_032763428;XP_032763429;XP_032763430;XP_032763432;XP_032763433;XP_032763434;XP_032763435;XP_032763436;XP_032763437 kinase D-interacting substrate of 220 kDa protein-coding 626028672 LOC116900942 60S ribosomal protein L17-like 5 87767866 87777419 - 116900942 MODEL JAAIVD010000023 pseudo 626028673 Trim14 tripartite motif containing 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN inflammatory response (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog) 1 99593582 99617177 - 22301074 116901908 MODEL JAAIVD010000025;XM_032904126 XP_032760017 tripartite motif-containing protein 14 protein-coding 626028683 LOC116890515 small nucleolar RNA SNORA48 1 218388190 218388329 + 116890515 MODEL JAAIVD010000025;XR_004386697 snorna 626028686 Sephs2 selenophosphate synthetase 2 ENCODES a protein that exhibits selenide, water dikinase activity (ortholog); INVOLVED IN selenium compound metabolic process (ortholog); selenocysteine biosynthetic process (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; ASSOCIATED WITH colorectal adenoma (ortholog); colorectal carcinoma (ortholog) 2 74613699 74615993 + 22301074;30032202 116891480 MODEL JAAIVD010000001;XM_032892581 XP_032748472 selenide, water dikinase 2 protein-coding 626028691 Fbxo27 F-box protein 27 FOUND IN SCF ubiquitin ligase complex (ortholog) 2 167307454 167313636 - 22301074;30032202 116892384 MODEL JAAIVD010000001;XM_032894049;XM_032894050 XP_032749940;XP_032749941 F-box only protein 27 protein-coding 626028704 Tmod1 tropomodulin 1 ENCODES a protein that exhibits actin binding (ortholog); tropomyosin binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); lens fiber cell development (ortholog); muscle contraction (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); ovarian cyst (ortholog); FOUND IN actin filament (ortholog); COP9 signalosome (ortholog); cortical cytoskeleton (ortholog) 1 399167 470713 - 22301074;30032202 116890697 MODEL JAAIVD010000025;XM_032891120;XM_032891130 XP_032747011;XP_032747021 tropomodulin-1 protein-coding 626028723 Dmxl2 Dmx like 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); chemical synaptic transmission (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH amenorrhea (ortholog); autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 71 (ortholog); FOUND IN neuronal dense core vesicle (ortholog); synaptic vesicle (ortholog) 8 48422175 48564920 - 22301074;30032202 116907129 MODEL JAAIVD010000027;XM_032910103;XM_032910105;XM_032910106;XM_032910107 XP_032765994;XP_032765996;XP_032765997;XP_032765998 dmX-like protein 2 protein-coding 626028775 LOC116897746 histone-lysine N-methyltransferase SETD2-like 4 834576 835476 - 116897746 MODEL JAAIVD010000003 pseudo 626028776 LOC116899787 U6 spliceosomal RNA 4 46287587 46287696 + 116899787 MODEL JAAIVD010000003;XR_004387795 snrna 626028779 LOC116913869 mitochondrial import receptor subunit TOM7 homolog 12 5541229 5552917 - 22301074 116913869 MODEL JAAIVD010000007;XM_032918163 XP_032774054 protein-coding 626028783 Nfkbil1 NFKB inhibitor like 1 ENCODES a protein that exhibits transcription regulator inhibitor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of lipopolysaccharide-mediated signaling pathway (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 18 7815339 7836190 - 22301074;30032202 116887070 MODEL JAAIVD010000013;XM_032888572;XM_032888574 XP_032744463;XP_032744465 NF-kappa-B inhibitor-like protein 1 protein-coding 626028794 LOC116909040 keratin, type I cytoskeletal 16-like 9 54976045 54978765 - 22301074;30032202 116909040 MODEL JAAIVD010000002;XM_032912521 XP_032768412 protein-coding 626028804 Slc26a5 solute carrier family 26 member 5 ENCODES a protein that exhibits chloride:bicarbonate antiporter activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 61 (ortholog); Deafness (ortholog); FOUND IN basolateral plasma membrane (ortholog); lateral plasma membrane (ortholog); lateral wall of outer hair cell (ortholog) 6 151110122 151149587 - 22301074;30032202 116903009 MODEL JAAIVD010000024;XM_032905319;XM_032905320;XM_032905321 XP_032761210;XP_032761211;XP_032761212 prestin protein-coding 626028826 LOC116908817 nucleolar RNA helicase 2-like 1 159551184 159553174 - 116908817 MODEL JAAIVD010000025 pseudo 626028827 LOC116911078 membrane cofactor protein 10 72986425 73012924 - 22301074;30032202 116911078 MODEL JAAIVD010000005;XM_032914862 XP_032770753 protein-coding 626028842 Plcxd1 phosphatidylinositol specific phospholipase C X domain containing 1 16 44257562 44260433 - 22301074 116885509 MODEL JAAIVD010000004;XM_032886801 XP_032742692 PI-PLC X domain-containing protein 1 protein-coding 626028852 LOC116887883 high mobility group protein B4-like X 49495525 49496041 - 116887883 MODEL JAAIVD010000014 pseudo 626028853 LOC116887239 40S ribosomal protein SA-like 18 20063134 20064019 + 116887239 MODEL JAAIVD010000013 pseudo 626028854 Kdf1 keratinocyte differentiation factor 1 INVOLVED IN developmental growth (ortholog); epidermal cell differentiation (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 12 (ortholog); genetic disease (ortholog); FOUND IN cell cortex (ortholog); cell junction (ortholog); cell leading edge (ortholog) 1 24701889 24712860 - 22301074;30032202 116895159 MODEL JAAIVD010000025;XM_032896524;XM_032896528;XM_032896530;XM_032896532 XP_032752415;XP_032752419;XP_032752421;XP_032752423 protein-coding 626028872 LOC116892675 isochorismatase domain-containing protein 2A 2 177463320 177481009 + 30032202 116892675 MODEL JAAIVD010000001;XM_032894507 XP_032750398 protein-coding 626028882 LOC116902784 chromatin target of PRMT1 protein-like 1 132123762 132124551 + 116902784 MODEL JAAIVD010000025 pseudo 626028883 Wdr36 WD repeat domain 36 INVOLVED IN regulation of axon extension (ortholog); retina homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); glaucoma (ortholog); Glaucoma 1, Open Angle, G (ortholog); FOUND IN small-subunit processome (ortholog) 15 11393270 11421339 - 22301074;30032202 116884920 MODEL JAAIVD010000010;XM_032886142 XP_032742033 WD repeat-containing protein 36 protein-coding 626028910 LOC116912949 U1 spliceosomal RNA 11 41430695 41430856 - 116912949 MODEL JAAIVD010000006;XR_004389517 snrna 626028913 LOC116895782 40S ribosomal protein S18-like 1 79938811 79939309 - 116895782 MODEL JAAIVD010000025 pseudo 626028914 Tex50 testis expressed 50 10 40454872 40457414 - 116911273 MODEL JAAIVD010000005;XM_032915178 XP_032771069 testis-expressed protein 50 protein-coding 626028919 Cplane2 ciliogenesis and planar polarity effector complex subunit 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); cranial skeletal system development (ortholog); ASSOCIATED WITH VACTERL association (ortholog); visceral heterotaxy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 1 16927907 16933269 - 22301074;30032202 116886462 MODEL JAAIVD010000025;XM_032887967;XM_032887975 XP_032743858;XP_032743866 ciliogenesis and planar polarity effector 2 protein-coding 626028932 LOC116900491 olfactory receptor 4X2-like 5 71786352 71787287 - 22301074 116900491 MODEL JAAIVD010000023;XM_032902226 XP_032758117 protein-coding 626028936 LOC116915163 U6 spliceosomal RNA 13 53018973 53019079 + 116915163 MODEL JAAIVD010000008;XR_004389825 snrna 626028939 Rpp14 ribonuclease P/MRP subunit p14 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog); nucleolus (ortholog) 12 78498979 78508462 + 22301074 116914003 MODEL JAAIVD010000007;XM_032918274;XM_032918275 XP_032774165;XP_032774166 ribonuclease P protein subunit p14 protein-coding 626028952 LOC116900579 olfactory receptor 4F3/4F16/4F29-like 5 90393807 90394772 - 22301074 116900579 MODEL JAAIVD010000023;XM_032902302 XP_032758193 protein-coding 626028956 Ccnb1 cyclin B1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); histone kinase activity (ortholog); patched binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); ASSOCIATED WITH breast cancer (ortholog); cervical cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog); cyclin B1-CDK1 complex (ortholog); cytoplasm (ortholog) 3 158156139 158163711 - 22301074;30032202 116897102 MODEL JAAIVD010000012;XM_032898744 XP_032754635 G2/mitotic-specific cyclin-B1 protein-coding 626028969 LOC116889576 U6 spliceosomal RNA X 39183029 39183137 - 116889576 MODEL JAAIVD010000014;XR_004386492 snrna 626028972 LOC116890386 U6 spliceosomal RNA 1 108649629 108649732 - 116890386 MODEL JAAIVD010000025;XR_004386592 snrna 626028975 LOC116903477 nuclear pore complex protein Nup50-like 6 50805313 50806799 + 22301074;30032202 116903477 MODEL JAAIVD010000024;XM_032906044 XP_032761935 protein-coding 626028979 LOC116910271 60S ribosomal protein L10-like 9 35851381 35852059 + 116910271 MODEL JAAIVD010000002 pseudo 626028980 LOC116884129 U6 spliceosomal RNA 14 65890300 65890407 + 116884129 MODEL JAAIVD010000009;XR_004385854 snrna 626028983 Barhl2 BarH like homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); cell fate commitment (ortholog); cell fate determination (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Lymphatic Metastasis (ortholog); oral squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) 11 16163106 16168229 - 22301074;30032202 116912772 MODEL JAAIVD010000006;XM_032916923 XP_032772814 barH-like 2 homeobox protein protein-coding 626028990 LOC116897761 5'-AMP-activated protein kinase catalytic subunit alpha-1-like 4 7757532 7769794 - 116897761 MODEL JAAIVD010000003 pseudo 626028991 Sgk2 serum/glucocorticoid regulated kinase 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleoplasm (ortholog) 5 154969860 154988115 - 22301074 116902389 MODEL JAAIVD010000023;XM_032904906 XP_032760797 serine/threonine-protein kinase Sgk2 protein-coding 626029007 LOC116891582 60S ribosomal protein L36-like 2 81171213 81171815 + 116891582 MODEL JAAIVD010000001 pseudo 626029008 LOC116913828 uncharacterized LOC116913828 12 64218756 64225516 - 116913828 MODEL JAAIVD010000007;XR_004389645 ncrna 626029013 Cox15 cytochrome c oxidase assembly factor COX15 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-CH group of donors (ortholog); INVOLVED IN cytochrome complex assembly (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); FOUND IN cytochrome complex (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 43255385 43272405 - 22301074;30032202 116891197 MODEL JAAIVD010000001;XM_032892021 XP_032747912 cytochrome c oxidase assembly protein COX15 homolog protein-coding 626029026 Cenpo centromere protein O FOUND IN inner kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 7 24880293 24894968 - 22301074;30032202 116906024 MODEL JAAIVD010000026;XM_032909079;XM_032909081;XM_032909082;XM_032909083;XM_032909084 XP_032764970;XP_032764972;XP_032764973;XP_032764974;XP_032764975 protein-coding 626029045 Nrap nebulin related anchoring protein ENCODES a protein that exhibits actin binding (ortholog); muscle alpha-actinin binding (ortholog); vinculin binding (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); Sudden Death (ortholog); FOUND IN fascia adherens (ortholog); muscle tendon junction (ortholog); myofibril (ortholog) 2 59783498 59859403 + 30032202 116891335 MODEL JAAIVD010000001;XM_032892265;XM_032892266;XM_032892267 XP_032748156;XP_032748157;XP_032748158 nebulin-related-anchoring protein protein-coding 626029096 LOC116892692 proline-rich protein 36-like 2 178025770 178029569 + 116892692 MODEL JAAIVD010000001;XM_032894550 XP_032750441 protein-coding 626029102 Fam169a family with sequence similarity 169 member A ASSOCIATED WITH COVID-19 (ortholog) 3 199490799 199547094 - 116897271 MODEL JAAIVD010000012;XM_032899003 XP_032754894 soluble lamin-associated protein of 75 kDa protein-coding 626029119 Meis3 Meis homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN nucleus (ortholog) 2 172894715 172906074 - 30032202 116892606 MODEL JAAIVD010000001;XM_032894402;XM_032894403;XM_032894404;XM_032894405;XM_032894406 XP_032750293;XP_032750294;XP_032750295;XP_032750296;XP_032750297 homeobox protein Meis3 protein-coding 626029149 LOC116906324 U6 spliceosomal RNA 7 90905005 90905108 + 116906324 MODEL JAAIVD010000026;XR_004388611 snrna 626029152 Tas2r38 taste 2 receptor member 38 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Thiourea Tasting (ortholog); FOUND IN plasma membrane (ortholog) 6 41433453 41434391 - 22301074;30032202 116903031 MODEL JAAIVD010000024;XM_032905336 XP_032761227 taste receptor type 2 member 38 protein-coding 626029155 LOC116886618 disks large homolog 5-like 17 14619597 14624257 + 116886618 MODEL JAAIVD010000011;XM_032888125 XP_032744016 protein-coding 626029163 Ptprc protein tyrosine phosphatase receptor type C ENCODES a protein that exhibits ankyrin binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); genetic disease (ortholog); FOUND IN bleb (ortholog); cell periphery (ortholog); cell surface (ortholog) 10 18430054 18543003 - 22301074;30032202 116911275 MODEL JAAIVD010000005;XM_032915180;XM_032915181;XM_032915182 XP_032771071;XP_032771072;XP_032771073 receptor-type tyrosine-protein phosphatase C protein-coding 626029203 Gzmk granzyme K ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); pattern recognition receptor activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); FOUND IN extracellular space (ortholog); symbiont cell surface (ortholog) 3 183575291 183583473 + 22301074 116895650 MODEL JAAIVD010000012;XM_032896856 XP_032752747 protein-coding 626029212 Gxylt2 glucoside xylosyltransferase 2 ENCODES a protein that exhibits UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog) 6 46223660 46308440 - 30032202 116904301 MODEL JAAIVD010000024;XM_032907220 XP_032763111 protein-coding 626029224 LOC116895764 pancreatic alpha-amylase-like 3 46070916 46083755 + 116895764 MODEL JAAIVD010000012 pseudo 626029225 LOC116888630 uncharacterized LOC116888630 X 116188740 116191143 + 116888630 MODEL JAAIVD010000014;XR_004386330 ncrna 626029231 Pls3 plastin 3 ENCODES a protein that exhibits structural constituent of presynaptic actin cytoskeleton (ortholog); INVOLVED IN bone development (ortholog); inner ear auditory receptor cell differentiation (ortholog); regulation of synaptic vesicle cycle (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Anterior Diaphragmatic Hernia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) X 101314037 101402273 + 22301074;30032202 116888733 MODEL JAAIVD010000014;XM_032890024 XP_032745915 plastin-3 protein-coding 626029252 Fmc1 formation of mitochondrial complex V assembly factor 1 INVOLVED IN apoptotic mitochondrial changes (ortholog); dopaminergic neuron differentiation (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); ASSOCIATED WITH Parkinson's Disease, Mitochondrial (ortholog); secondary Parkinson disease (ortholog); FOUND IN mitochondrion (ortholog) 6 101256229 101264057 - 30032202 116903944 MODEL JAAIVD010000024;XM_032906732 XP_032762623 formation of mitochondrial complex V assembly factor 1 homolog;protein FMC1 homolog protein-coding 626029258 Prkg1 protein kinase cGMP-dependent 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); cGMP binding (ortholog); cGMP-dependent protein kinase activity (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); cerebellum development (ortholog); cGMP-mediated signaling (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH allergic rhinitis (ortholog); amphetamine abuse (ortholog); connective tissue disease (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 2 30872391 31757664 - 22301074 116891085 MODEL JAAIVD010000001;XM_032891799 XP_032747690 cGMP-dependent protein kinase 1 protein-coding 626029268 LOC116894264 U6 snRNA-associated Sm-like protein LSm5 2 117956373 117956631 - 116894264 MODEL JAAIVD010000001 pseudo 626029269 LOC116904720 small nucleolar RNA SNORA17 6 94203100 94203228 + 116904720 MODEL JAAIVD010000024;XR_004388413 snorna 626029272 Pate3 prostate and testis expressed 3 8 31189045 31191155 - 116907871 MODEL JAAIVD010000027;XM_032911060 XP_032766951 prostate and testis expressed protein 3 protein-coding 626029277 Ddx10 DEAD-box helicase 10 INVOLVED IN anterior head development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog) 8 47077445 47230807 - 22301074;30032202 116908303 MODEL JAAIVD010000027;XM_032911581 XP_032767472 probable ATP-dependent RNA helicase DDX10 protein-coding 626029299 Ntan1 N-terminal asparagine amidase ENCODES a protein that exhibits protein-N-terminal asparagine amidohydrolase activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); memory (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 9134876 9150251 - 22301074;30032202 116909273 MODEL JAAIVD010000002;XM_032912801;XM_032912802;XM_032912804;XM_032912805;XM_032912806;XM_032912807;XM_032912808 XP_032768692;XP_032768693;XP_032768695;XP_032768696;XP_032768697;XP_032768698;XP_032768699 protein N-terminal asparagine amidohydrolase protein-coding 626029329 Nsfl1c NSFL1 cofactor ENCODES a protein that exhibits ATPase binding (ortholog); phospholipid binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); Golgi organization (ortholog); membrane fusion (ortholog); FOUND IN cytosol (ortholog); spindle pole centrosome (ortholog); VCP-NSFL1C complex (ortholog) 5 130849304 130875700 + 30032202 116902103 MODEL JAAIVD010000023;XM_032904406;XM_032904407 XP_032760297;XP_032760298 NSFL1 cofactor p47 protein-coding 626029346 Nubp1 NUBP iron-sulfur cluster assembly factor 1, cytosolic ENCODES a protein that exhibits iron-sulfur cluster binding (ortholog); INVOLVED IN centrosome localization (ortholog); intracellular iron ion homeostasis (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 11941763 11952455 - 22301074;30032202 116908793 MODEL JAAIVD010000002;XM_032912186 XP_032768077 cytosolic Fe-S cluster assembly factor NUBP1;nucleotide binding protein 1 protein-coding 626029361 Lats2 large tumor suppressor kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); hippo signaling (ortholog); hormone-mediated signaling pathway (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); malignant astrocytoma (ortholog); peritoneal mesothelioma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 67104176 67155101 + 22301074;30032202 116913485 MODEL JAAIVD010000007;XM_032917685 XP_032773576 serine/threonine-protein kinase LATS2 protein-coding 626029373 B4galnt3 beta-1,4-N-acetyl-galactosaminyltransferase 3 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN Golgi apparatus (ortholog) 6 26510089 26542490 + 22301074;30032202 116903913 MODEL JAAIVD010000024;XM_032906678 XP_032762569 beta-1,4-N-acetylgalactosaminyltransferase 3 protein-coding 626029396 Actr1a actin related protein 1A INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH colon cancer (ortholog); Down syndrome (ortholog); FOUND IN cell cortex (ortholog); centriole (ortholog); centrosome (ortholog) 2 45836809 45855659 - 116891247 MODEL JAAIVD010000001;XM_032892124;XM_032892125;XM_032892126 XP_032748015;XP_032748016;XP_032748017 alpha-centractin protein-coding 626029415 LOC116902588 small nucleolar RNA SNORA17 5 122474645 122474782 - 116902588 MODEL JAAIVD010000023;XR_004388180 snorna 626029418 C1ql4 complement C1q like 4 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of fat cell differentiation (ortholog); negative regulation of fibroblast proliferation (ortholog); FOUND IN extracellular space (ortholog) 1 271911863 271916066 - 22301074 116890249 MODEL JAAIVD010000025;XM_032890974 XP_032746865 complement C1q-like protein 4 protein-coding 626029424 LOC116904809 U6 spliceosomal RNA 6 99054822 99054928 - 116904809 MODEL JAAIVD010000024;XR_004388460 snrna 626029427 LOC116898473 histone deacetylase 1-like 4 111833652 111860514 - 116898473 MODEL JAAIVD010000003 pseudo 626029428 LOC116885029 U1 spliceosomal RNA 15 22822041 22822179 + 116885029 MODEL JAAIVD010000010 pseudo 626029429 Agr3 anterior gradient 3, protein disulphide isomerase family member ENCODES a protein that exhibits dystroglycan binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) 7 49189702 49215585 + 30032202 116904972 MODEL JAAIVD010000026;XM_032907652;XM_032907653 XP_032763543;XP_032763544 anterior gradient protein 3 protein-coding 626029447 LOC116886631 uncharacterized proline-rich protein-like 17 16951631 16952959 + 116886631 MODEL JAAIVD010000011;XM_032888136 XP_032744027 protein-coding 626029451 LOC116899713 myosin regulatory light chain RLC-A 4 180459975 180468103 - 22301074;30032202;8034049 116899713 MODEL JAAIVD010000003;XM_032901749;XM_032901750;Z32519 XP_032757640;XP_032757641 protein-coding 626029462 LOC116893360 basic proline-rich protein-like 2 160516318 161061580 - 116893360 MODEL JAAIVD010000001 pseudo 626029463 LOC116911966 eukaryotic translation initiation factor 5-like 11 30198463 30200339 - 116911966 MODEL JAAIVD010000006 pseudo 626029464 LOC116889330 protein FAM156A/FAM156B-like X 20099812 20122919 - 30032202 116889330 MODEL JAAIVD010000014;XM_032890448;XR_004386376 XP_032746339 protein-coding 626029473 Crocc2 ciliary rootlet coiled-coil, rootletin family member 2 ASSOCIATED WITH COVID-19 (ortholog) 4 165102047 165163006 + 116899657 MODEL JAAIVD010000003;XM_032901668 XP_032757559 putative ciliary rootlet coiled-coil protein 2 protein-coding 626029510 Nr1h4 nuclear receptor subfamily 1 group H member 4 ENCODES a protein that exhibits bile acid binding (ortholog); bile acid nuclear receptor activity (ortholog); chenodeoxycholic acid binding (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid metabolic process (ortholog); cell-cell junction assembly (ortholog); PARTICIPATES IN bile acid signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); Animal Disease Models (ortholog); atherosclerosis (ortholog); FOUND IN cytosol (ortholog); euchromatin (ortholog); nuclear speck (ortholog) 1 168491966 168582746 - 22301074;30032202 116907855 MODEL JAAIVD010000025;XM_032911048;XM_032911051;XM_032911059;XM_032911064 XP_032766939;XP_032766942;XP_032766950;XP_032766955 bile acid receptor protein-coding 626029534 Stk4 serine/threonine kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN apoptotic process (ortholog); branching involved in blood vessel morphogenesis (ortholog); cell differentiation involved in embryonic placenta development (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); genetic disease (ortholog); primary immunodeficiency disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 5 153826896 153904594 - 22301074;30032202 116902367 MODEL JAAIVD010000023;XM_032904862 XP_032760753 serine/threonine-protein kinase 4 protein-coding 626029549 LOC116885026 small nucleolar RNA SNORA19 15 3881437 3881577 - 116885026 MODEL JAAIVD010000010 pseudo 626029550 LOC116905832 aminoacyl tRNA synthase complex-interacting multifunctional protein 2-like 7 105461277 105462232 + 116905832 MODEL JAAIVD010000026 pseudo 626029551 C4H21orf91 chromosome 4 C21orf91 homolog INVOLVED IN cerebral cortex neuron differentiation (ortholog); positive regulation of dendritic spine development (ortholog) 4 63408883 63433772 - 116899043 MODEL JAAIVD010000003;XM_032900506;XM_032900507;XM_032900508;XM_032900509 XP_032756397;XP_032756398;XP_032756399;XP_032756400 protein EURL homolog protein-coding 626029568 Pard6b par-6 family cell polarity regulator beta INVOLVED IN protein-containing complex assembly (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) 5 149906444 149926469 - 30032202 116902303 MODEL JAAIVD010000023;XM_032904747 XP_032760638 partitioning defective 6 homolog beta protein-coding 626029575 Smoc2 SPARC related modular calcium binding 2 ENCODES a protein that exhibits calcium ion binding (ortholog); glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Dentin Dysplasia, Type 1 (ortholog); Experimental Liver Cirrhosis (ortholog); schizophrenia (ortholog); FOUND IN basement membrane (ortholog); cell periphery (ortholog); extracellular matrix (ortholog) 2 183707892 183836974 + 22301074;30032202 116892779 MODEL JAAIVD010000001;XM_032894654;XM_032894655 XP_032750545;XP_032750546 SPARC-related modular calcium-binding protein 2 protein-coding 626029594 LOC116906465 small nucleolar RNA SNORA17 7 115486169 115486300 - 116906465 MODEL JAAIVD010000026;XR_004388720 snorna 626029597 LOC116913008 small nucleolar RNA SNORA17 11 33990626 33990736 + 116913008 MODEL JAAIVD010000006 pseudo 626029598 LOC116904678 small nucleolar RNA SNORA36 family 6 49872670 49872800 + 116904678 MODEL JAAIVD010000024;XR_004388375 snorna 626029601 LOC116883690 proteasome maturation protein-like 14 63262703 63263131 - 22301074;30032202 116883690 MODEL JAAIVD010000009;XM_032884904 XP_032740795 protein-coding 626029605 Fam216a family with sequence similarity 216 member A 16 31475075 31484479 + 116885399 MODEL JAAIVD010000004;XM_032886680 XP_032742571 protein FAM216A protein-coding 626029616 LOC116893745 glyceraldehyde-3-phosphate dehydrogenase-like 2 23749191 23750210 + 116893745 MODEL JAAIVD010000001 pseudo 626029617 LOC116894731 ubiquitin-conjugating enzyme E2 L3-like 2 66770421 66773490 - 116894731 MODEL JAAIVD010000001 pseudo 626029618 Tmem39a transmembrane protein 39A INVOLVED IN negative regulation of autophagosome assembly (ortholog); negative regulation of autophagosome maturation (ortholog); positive regulation of viral genome replication (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 4 23505452 23534744 + 30032202 116898847 MODEL JAAIVD010000003;XM_032900202 XP_032756093 protein-coding 626029631 Xkr4 XK related 4 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN phosphatidylserine exposure on apoptotic cell surface (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN plasma membrane (ortholog) 1 138699610 139084222 - 30032202 116903666 MODEL JAAIVD010000025;XM_032906327 XP_032762218 XK-related protein 4 protein-coding 626029638 LOC116887588 H-2 class II histocompatibility antigen, E-S beta chain-like 18 7034764 7041352 + 22301074;30032202 116887588 MODEL JAAIVD010000013;XM_032889211 XP_032745102 protein-coding 626029645 LOC116883676 keratin, type II cytoskeletal cochleal-like 1 261507256 261516882 + 22301074;30032202 116883676 MODEL JAAIVD010000025;XM_032884889;XM_032884896 XP_032740780;XP_032740787 protein-coding 626029658 LOC116889446 U6 spliceosomal RNA X 48169648 48169748 - 116889446 MODEL JAAIVD010000014 pseudo 626029659 Trem2 triggering receptor expressed on myeloid cells 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 17 (ortholog); dementia (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); plasma membrane raft (ortholog) 4 81575823 81581791 - 30032202 116899070 MODEL JAAIVD010000003;XM_032900554;XM_032900555;XM_032900556 XP_032756445;XP_032756446;XP_032756447 protein-coding 626029672 LOC116908999 C-C motif chemokine 6 9 87100775 87106372 + 22301074;30032202 116908999 MODEL JAAIVD010000002;XM_032912467 XP_032768358 protein-coding 626029680 LOC116887195 olfactory receptor 2B2-like 18 10697460 10698404 + 22301074 116887195 MODEL JAAIVD010000013;XM_032888752 XP_032744643 protein-coding 626029683 Neb nebulin ASSOCIATED WITH Actin-Accumulation Myopathy (ortholog); arthrogryposis multiplex congenita-6 (ortholog); congenital muscular dystrophy (ortholog); FOUND IN contractile muscle fiber (ortholog); myofibril (ortholog); protein-containing complex (ortholog) 5 29923210 30111473 - 30032202 116901406 MODEL JAAIVD010000023;XM_032903283 XP_032759174 protein-coding 626029845 Miox myo-inositol oxygenase ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); ferric iron binding (ortholog); inositol oxygenase activity (ortholog); INVOLVED IN inositol catabolic process (ortholog); PARTICIPATES IN inositol metabolic pathway; FOUND IN cytoplasm (ortholog); inclusion body (ortholog) 1 258636960 258639473 + 22301074;30032202 116890172 MODEL JAAIVD010000025;XM_032890907 XP_032746798 inositol oxygenase protein-coding 626029859 Polr3b RNA polymerase III subunit B ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); DNA/RNA hybrid binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); snRNA transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH amenorrhea (ortholog); Charcot-Marie-Tooth Disease Type 1I (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); RNA polymerase III complex (ortholog) 1 163717434 163825622 - 22301074;30032202 116907463 MODEL JAAIVD010000025;XM_032910451 XP_032766342 DNA-directed RNA polymerase III subunit RPC2 protein-coding 626029891 Nup210 nucleoporin 210 INVOLVED IN protein-containing complex assembly (ortholog); FOUND IN nuclear envelope (ortholog) 6 55821491 55915902 + 30032202 116904310 MODEL JAAIVD010000024;XM_032907225 XP_032763116 nuclear pore membrane glycoprotein 210 protein-coding 626029935 Xpc XPC complex subunit, DNA damage recognition and repair factor ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA damage sensor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); autistic disorder (ortholog); Chromosome Aberrations (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 6 55425564 55452238 + 30032202 116903500 MODEL JAAIVD010000024;XM_032906096 XP_032761987 DNA repair protein complementing XP-C cells protein-coding 626029955 LOC116893197 elongation factor 1-alpha 1-like 2 105485473 105490537 + 116893197 MODEL JAAIVD010000001 pseudo 626029956 LOC116893601 glutathione S-transferase P 2-like 2 3577013 3579568 + 22301074;30032202 116893601 MODEL JAAIVD010000001;XM_032895306;XM_032895307;XM_032895309 XP_032751197;XP_032751198;XP_032751200 glutathione S-transferase P-like protein-coding 626029974 LOC116914201 small nucleolar RNA SNORA70 12 53933880 53934025 + 116914201 MODEL JAAIVD010000007 pseudo 626029975 LOC116891143 cytochrome P450 2C6 2 38859288 38886259 + 22301074;30032202 116891143 MODEL JAAIVD010000001;X06712;XM_032891887;XM_032891888;XM_032891889;XM_032891891 CAA29899;XP_032747778;XP_032747779;XP_032747780;XP_032747782 protein-coding 626029998 LOC116892411 low molecular weight phosphotyrosine protein phosphatase-like 2 168085632 168086395 - 116892411 MODEL JAAIVD010000001 pseudo 626029999 Srrm4 serine/arginine repetitive matrix 4 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); INVOLVED IN cell differentiation (ortholog); mRNA processing (ortholog); nervous system development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Hearing Disorders (ortholog); vestibular disease (ortholog); FOUND IN nucleus (ortholog) 16 37329402 37390958 + 30032202 116885269 MODEL JAAIVD010000004;XM_032886503 XP_032742394 serine/arginine repetitive matrix protein 4 protein-coding 626030018 LOC116902563 small nucleolar RNA SNORA48 5 86646993 86647136 + 116902563 MODEL JAAIVD010000023;XR_004388159 snorna 626030021 LOC116911858 small nucleolar RNA U13 10 30264301 30264403 - 116911858 MODEL JAAIVD010000005;XR_004389380 snorna 626030024 Ctu2 cytosolic thiouridylase subunit 2 ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); CAKUT (ortholog); FOUND IN protein-containing complex (ortholog) 17 42115931 42120741 + 22301074;30032202 116886292 MODEL JAAIVD010000011;XM_032887724;XM_032887725;XM_032887726 XP_032743615;XP_032743616;XP_032743617 cytoplasmic tRNA 2-thiolation protein 2 protein-coding 626030051 Ezr ezrin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); astral microtubule organization (ortholog); PARTICIPATES IN FasL mediated signaling pathway; parathyroid hormone signaling pathway; protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical part of cell (ortholog) 2 192379000 192422154 + 22301074;30032202 116892846 MODEL JAAIVD010000001;XM_032894736 XP_032750627 protein-coding 626030068 LOC116883183 40S ribosomal protein S27-like 14 32287919 32288166 - 116883183 MODEL JAAIVD010000009 pseudo 626030069 Nacad NAC alpha domain containing 11 75529006 75537441 - 30032202 116912125 MODEL JAAIVD010000006;XM_032916034 XP_032771925 NAC-alpha domain-containing protein 1 protein-coding 626030081 Adat3 adenosine deaminase tRNA specific 3 ASSOCIATED WITH neurodevelopmental disorder with brain abnormalities, poor growth, and dysmorphic facies (ortholog) 1 154279685 154284492 - 30032202 116904990 MODEL JAAIVD010000025;XM_032907675 XP_032763566 probable inactive tRNA-specific adenosine deaminase-like protein 3 protein-coding 626030087 Mical2 microtubule associated monooxygenase, calponin and LIM domain containing 2 ENCODES a protein that exhibits actin binding (ortholog); mitogen-activated protein kinase binding (ortholog); monooxygenase activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); cytoskeleton organization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); liver cirrhosis (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); nucleus (ortholog) 2 89124003 89262730 - 22301074 116891647 MODEL JAAIVD010000001;XM_032892880;XM_032892882;XM_032892883;XM_032892884;XM_032892885;XM_032892886;XM_032892887;XM_032892888 XP_032748771;XP_032748773;XP_032748774;XP_032748775;XP_032748776;XP_032748777;XP_032748778;XP_032748779 F-actin-monooxygenase MICAL2 protein-coding 626030132 LOC116906868 olfactory receptor 8B3-like 8 32315656 32316592 + 116906868 MODEL JAAIVD010000027 pseudo 626030133 LOC116887511 alpha/beta hydrolase domain-containing protein 17C-like 18 9519286 9520225 + 116887511 MODEL JAAIVD010000013 pseudo 626030134 Casp7 caspase 7 ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to staurosporine (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; glutathione metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 2 59734906 59773424 - 22301074;30032202 116891334 MODEL JAAIVD010000001;XM_032892264 XP_032748155 caspase-7 protein-coding 626030145 Lbhd1 LBH domain containing 1 2 9053535 9060224 - 30032202 116890919 MODEL JAAIVD010000001;XM_032891552 XP_032747443 LBH domain-containing protein 1 protein-coding 626030154 LOC116899619 UDP-glucuronosyltransferase 1-7-like 4 160186724 160187701 + 22301074 116899619 MODEL JAAIVD010000003;XM_032901581 XP_032757472 protein-coding 626030159 Ido1 indoleamine 2,3-dioxygenase 1 ENCODES a protein that exhibits amino acid binding (ortholog); indoleamine 2,3-dioxygenase activity (ortholog); L-tryptophan 2,3-dioxygenase activity (ortholog); INVOLVED IN inflammatory response (ortholog); kynurenic acid biosynthetic process (ortholog); L-tryptophan catabolic process to kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); Acute Lung Injury (ortholog); Animal Toxoplasmosis (ortholog); FOUND IN cytoplasm (ortholog); smooth muscle contractile fiber (ortholog); stereocilium bundle (ortholog) 13 61848023 61860167 + 22301074;30032202 116914836 MODEL JAAIVD010000008;XM_032919291 XP_032775182 protein-coding 626030173 Epo erythropoietin ENCODES a protein that exhibits cytokine activity (ortholog); erythropoietin receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN acute-phase response (ortholog); apoptotic process (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Subdural Hematoma (ortholog); Acute-Phase Reaction (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); extracellular space (ortholog) 16 16531156 16534725 + 22301074;30032202 116885801 MODEL JAAIVD010000004;XM_032887132;XM_032887133 XP_032743023;XP_032743024 protein-coding 626030185 LOC116913215 mast cell protease 2-like 12 69035277 69037179 + 116913215 MODEL JAAIVD010000007 pseudo 626030186 LOC116913237 ribosome biogenesis protein BRX1 homolog 12 74177300 74178495 + 116913237 MODEL JAAIVD010000007 pseudo 626030187 LOC116886342 uncharacterized LOC116886342 17 28861588 28868864 - 116886342 MODEL JAAIVD010000011;XR_004386099 ncrna 626030191 LOC116906799 olfactory receptor 1082 1 156930003 156930951 + 22301074;30032202 116906799 MODEL JAAIVD010000025;XM_032909675 XP_032765566 protein-coding 626030195 Fank1 fibronectin type III and ankyrin repeat domains 1 INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of DNA-binding transcription factor activity (ortholog); FOUND IN chromatin (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) 2 67997261 68103921 - 22301074;30032202 116893110 MODEL JAAIVD010000001;XM_032895049 XP_032750940 fibronectin type 3 and ankyrin repeat domains protein 1 protein-coding 626030209 Man2b2 mannosidase alpha class 2B member 2 ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); mannosyl-oligosaccharide 1,6-alpha-mannosidase activity (ortholog); INVOLVED IN glycoprotein catabolic process (ortholog); mannose metabolic process (ortholog); ASSOCIATED WITH combined immunodeficiency (ortholog); congenital disorder of glycosylation (ortholog); Congenital disorder of glycosylation, type 1EE (ortholog) 11 68317759 68342416 + 22301074;30032202 116912391 MODEL JAAIVD010000006;XM_032916448;XM_032916449 XP_032772339;XP_032772340 epididymis-specific alpha-mannosidase protein-coding 626030237 C4H2orf80 chromosome 4 C2orf80 homolog 4 138993875 139009623 - 116899456 MODEL JAAIVD010000003;XM_032901238 XP_032757129 uncharacterized protein C2orf80 homolog protein-coding 626030248 LOC116914755 eukaryotic translation initiation factor 2 subunit 1-like 13 24600284 24601715 + 22301074;30032202 116914755 MODEL JAAIVD010000008;XM_032919205 XP_032775096 protein-coding 626030253 Spata18 spermatogenesis associated 18 ENCODES a protein that exhibits cardiolipin binding (ortholog); identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); cardiolipin biosynthetic process (ortholog); mitochondrial protein catabolic process (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 11 30441342 30474806 + 30032202 116912325 MODEL JAAIVD010000006;XM_032916360;XM_032916361 XP_032772251;XP_032772252 mitochondria-eating protein protein-coding 626030274 LOC116910208 olfactory receptor 2V2-like 9 31562460 31563433 - 22301074 116910208 MODEL JAAIVD010000002;XM_032914083 XP_032769974 protein-coding 626030278 Gtsf1l gametocyte specific factor 1 like ENCODES a protein that exhibits protein-containing complex binding (ortholog) 5 154900935 154901640 + 116900793 MODEL JAAIVD010000023;XM_032902505 XP_032758396 gametocyte-specific factor 1-like protein-coding 626030283 LOC116893344 lys-63-specific deubiquitinase BRCC36-like 2 156573418 156574539 + 116893344 MODEL JAAIVD010000001 pseudo 626030284 LOC116907706 ras-specific guanine nucleotide-releasing factor 1-like 8 81431421 81500571 - 22301074 116907706 MODEL JAAIVD010000027;XM_032910830 XP_032766721 protein-coding 626030301 LOC116889376 40S ribosomal protein S29-like X 87011245 87011415 + 116889376 MODEL JAAIVD010000014 pseudo 626030302 Elf1 E74 like ETS transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of T cell receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleus (ortholog) 12 44762064 44858955 - 22301074;30032202 116913661 MODEL JAAIVD010000007;XM_032917947;XM_032917949;XM_032917950 XP_032773838;XP_032773840;XP_032773841 ETS-related transcription factor Elf-1 protein-coding 626030322 LOC116906414 5S ribosomal RNA 7 37913546 37913664 - 116906414 MODEL JAAIVD010000026;XR_004388676 rrna 626030325 Wdr38 WD repeat domain 38 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog) 5 16746313 16749658 + 22301074 116901370 MODEL JAAIVD010000023;XM_032903235 XP_032759126 WD repeat-containing protein 38 protein-coding 626030338 Chchd10 coiled-coil-helix-coiled-coil-helix domain containing 10 INVOLVED IN inner mitochondrial membrane organization (ortholog); mitochondrial membrane organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia and/or amyotrophic lateral sclerosis 2 (ortholog); genetic disease (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 18 11509939 11511799 - 30032202 116887283 MODEL JAAIVD010000013;XM_032888863 XP_032744754 coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial protein-coding 626030346 LOC116889832 keratin, type I cytoskeletal 16-like 22301074;30032202 116889832 MODEL JAAIVD010001509;XM_032890667 XP_032746558 protein-coding 626030347 LOC116893532 heterogeneous nuclear ribonucleoprotein C-like 2 199912310 199917324 - 116893532 MODEL JAAIVD010000001 pseudo 626030348 LOC116893349 keratin-associated protein 21-1 2 157319036 157319416 - 30032202 116893349 MODEL JAAIVD010000001;XM_032895157 XP_032751048 protein-coding 626030351 Cluh CLUH binding protein of NUMT mRNA ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 9 93382733 93404340 + 22301074;30032202 116908623 MODEL JAAIVD010000002;XM_032911875 XP_032767766 clustered mitochondria homolog;clustered mitochondria protein homolog protein-coding 626030381 Kirrel2 kirre like nephrin family adhesion molecule 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog); slit diaphragm (ortholog) 2 165544862 165554555 + 30032202 116892317 MODEL JAAIVD010000001;XM_032893940 XP_032749831 kin of IRRE-like protein 2 protein-coding 626030400 LOC116886546 40S ribosomal protein S20-like 17 30786652 30787059 - 22301074;30032202 116886546 MODEL JAAIVD010000011;XM_032888065 XP_032743956 protein-coding 626030404 LOC116913218 uncharacterized LOC116913218 1 248713541 248725362 + 116913218 MODEL JAAIVD010000025;XR_004389601 ncrna 626030409 Tmod3 tropomodulin 3 ENCODES a protein that exhibits tropomyosin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); erythrocyte development (ortholog); positive regulation of mitotic cell cycle phase transition (ortholog); FOUND IN striated muscle thin filament (ortholog) 8 69777957 69840454 - 22301074;30032202 116906569 MODEL JAAIVD010000027;XM_032909290 XP_032765181 tropomodulin-3 protein-coding 626030423 Pgap6 post-GPI attachment to proteins 6 9 3377442 3387654 + 30032202 116908801 MODEL JAAIVD010000002;XM_032912203 XP_032768094 post-GPI attachment to proteins factor 6;post-glycosylphosphatidylinositol attachment to proteins 6 protein-coding 626030440 LOC116897592 small nucleolar RNA SNORA17 3 74696676 74696793 - 116897592 MODEL JAAIVD010000012 pseudo 626030441 LOC116893176 60 kDa heat shock protein, mitochondrial-like 1 64858301 64860364 + 116893176 MODEL JAAIVD010000025 pseudo 626030442 Mettl9 methyltransferase 9, His-X-His N1(pi)-histidine ENCODES a protein that exhibits protein-L-histidine N-pros-methyltransferase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 2 80720561 80767742 - 22301074;30032202 116891572 MODEL JAAIVD010000001;XM_032892751;XM_032892752 XP_032748642;XP_032748643 methyltransferase 9, His-X-His N1-histidine;methyltransferase like 9;methyltransferase-like protein 9 protein-coding 626030453 Tmprss7 transmembrane serine protease 7 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN plasma membrane (ortholog) 4 30382858 30417619 - 22301074 116898879 MODEL JAAIVD010000003;XM_032900251 XP_032756142 transmembrane protease serine 7 protein-coding 626030475 Traf7 TNF receptor associated factor 7 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to interleukin-6 (ortholog); ASSOCIATED WITH adenomatoid tumor (ortholog); Cardiac, Facial, and Digital Anomalies with Developmental Delay (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 9 1792688 1811200 - 22301074;30032202 116910452 MODEL JAAIVD010000002;XM_032914306;XM_032914307;XM_032914308;XM_032914310;XM_032914311;XM_032914312;XM_032914313;XM_032914314;XM_032914315;XM_032914316;XM_032914317;XM_032914318;XM_032914319 XP_032770197;XP_032770198;XP_032770199;XP_032770201;XP_032770202;XP_032770203;XP_032770204;XP_032770205;XP_032770206;XP_032770207;XP_032770208;XP_032770209;XP_032770210 E3 ubiquitin-protein ligase TRAF7 protein-coding 626030535 LOC116901262 uncharacterized LOC116901262 5 10447898 10449427 + 116901262 MODEL JAAIVD010000023;XR_004387969 ncrna 626030539 Zscan22 zinc finger and SCAN domain containing 22 ASSOCIATED WITH Liver Neoplasms (ortholog) 2 174266076 174277786 - 116892624 MODEL JAAIVD010000001;XM_032894436;XM_032894437 XP_032750327;XP_032750328 zinc finger and SCAN domain-containing protein 22 protein-coding 626030549 Trarg1 trafficking regulator of GLUT4 (SLC2A4) 1 INVOLVED IN cellular response to insulin stimulus (ortholog); endosome to plasma membrane protein transport (ortholog); establishment of localization in cell (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 9 95373354 95393104 + 22301074;30032202 116909475 MODEL JAAIVD010000002;XM_032913069 XP_032768960 trafficking regulator of GLUT4 1 protein-coding 626030556 LOC116893235 cullin-4B-like 2 120611485 120616195 - 116893235 MODEL JAAIVD010000001 pseudo 626030557 Nmnat2 nicotinamide nucleotide adenylyltransferase 2 ENCODES a protein that exhibits nicotinamide-nucleotide adenylyltransferase activity (ortholog); nicotinate-nucleotide adenylyltransferase activity (ortholog); protein ADP-ribosyltransferase-substrate adaptor activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); cellular response to angiotensin (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); vascular dementia (ortholog); FOUND IN cytosol (ortholog); extrinsic component of membrane (ortholog); Golgi apparatus (ortholog) 10 32420367 32594489 + 22301074;30032202 116911744 MODEL JAAIVD010000005;XM_032915730 XP_032771621 nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2 protein-coding 626030572 LOC116899843 small nucleolar RNA SNORA17 4 23114580 23114711 + 116899843 MODEL JAAIVD010000003;XR_004387840 snorna 626030575 Osbp oxysterol binding protein ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN ceramide transport (ortholog); intracellular cholesterol transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); dengue hemorrhagic fever (ortholog); Dwarfism (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 12055814 12085519 + 30032202 116890987 MODEL JAAIVD010000001;XM_032891661 XP_032747552 oxysterol-binding protein 1 protein-coding 626030593 LOC116886001 small nucleolar RNA SNORA38 16 4744321 4744461 - 116886001 MODEL JAAIVD010000004;XR_004386073 snorna 626030596 LOC116908393 dnaJ homolog subfamily C member 30, mitochondrial-like 1 174538815 174539358 - 116908393 MODEL JAAIVD010000025 pseudo 626030597 Usp36 ubiquitin specific peptidase 36 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); histone H2B deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of macroautophagy (ortholog); nucleolus organization (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 65764916 65795105 + 22301074;30032202 116908880 MODEL JAAIVD010000002;XM_032912323 XP_032768214 ubiquitin carboxyl-terminal hydrolase 36 protein-coding 626030622 Thra thyroid hormone receptor alpha ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adrenal gland development (ortholog); animal organ morphogenesis (ortholog); cartilage condensation (ortholog); ASSOCIATED WITH breast cancer (ortholog); congenital nongoitrous hypothyroidism 6 (ortholog); Diaphragmatic Hernia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 9 55671177 55694947 - 22301074;30032202 116909737 MODEL JAAIVD010000002;X07409;XM_032913415 CAA30307;XP_032769306 protein-coding 626030635 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889700 MODEL JAAIVD010000052 trna 626030636 LOC116893327 ribosome production factor 1-like 2 155227741 155228662 + 116893327 MODEL JAAIVD010000001 pseudo 626030637 LOC116906113 non-histone chromosomal protein HMG-14-like 7 81132585 81138068 + 116906113 MODEL JAAIVD010000026 pseudo 626030638 LOC116889813 G protein-activated inward rectifier potassium channel 2-like 22301074;30032202 116889813 MODEL JAAIVD010001035;XM_032890658 XP_032746549 protein-coding 626030639 LOC116895201 dnaJ homolog subfamily B member 6-like 3 1371241 1377757 - 116895201 MODEL JAAIVD010000012 pseudo 626030640 LOC116890408 U6 spliceosomal RNA 1 40655731 40655838 + 116890408 MODEL JAAIVD010000025;XR_004386610 snrna 626030643 Lap3 leucine aminopeptidase 3 ENCODES a protein that exhibits peptidase activity (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrion (ortholog); trans-Golgi network (ortholog) 11 60369912 60388360 - 22301074;30032202 116912373 MODEL JAAIVD010000006;XM_032916432 XP_032772323 cytosol aminopeptidase protein-coding 626030660 Cdk20 cyclin dependent kinase 20 INVOLVED IN dorsal/ventral neural tube patterning (ortholog); embryonic brain development (ortholog); embryonic camera-type eye development (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 14 75144383 75150943 - 22301074;30032202 116883754 MODEL JAAIVD010000009;XM_032884998 XP_032740889 cyclin-dependent kinase 20 protein-coding 626030672 Fsbp fibrinogen silencer binding protein ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 131996487 132001919 - 116903375 MODEL JAAIVD010000025;XM_032905867 XP_032761758 fibrinogen silencer-binding protein protein-coding 626030678 Cdh26 cadherin 26 ENCODES a protein that exhibits alpha-catenin binding (ortholog); beta-catenin binding (ortholog); delta-catenin binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); FOUND IN microtubule cytoskeleton (ortholog); plasma membrane (ortholog) 5 155497829 155550363 + 22301074;30032202 116901094 MODEL JAAIVD010000023;XM_032902656 XP_032758547 cadherin-like protein 26 protein-coding 626030696 LOC116907228 protein PBDC1-like 8 92203930 92204843 - 30032202 116907228 MODEL JAAIVD010000027;XM_032910193 XP_032766084 protein-coding 626030701 LOC116889715 ATP-dependent 6-phosphofructokinase-like 22301074;30032202 116889715 MODEL JAAIVD010000061;XM_032890594 XP_032746485 protein-coding 626030702 LOC116897401 U6 spliceosomal RNA 3 144240539 144240645 - 116897401 MODEL JAAIVD010000012;XR_004387444 snrna 626030705 LOC116913545 uncharacterized LOC116913545 1 249395255 249399451 + 116913545 MODEL JAAIVD010000025;XR_004389629 ncrna 626030710 Ppm1j protein phosphatase, Mg2+/Mn2+ dependent 1J ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog) 3 53329345 53334173 - 30032202 116896428 MODEL JAAIVD010000012;XM_032897576;XM_032897577;XM_032897578;XM_032897579 XP_032753467;XP_032753468;XP_032753469;XP_032753470 protein phosphatase 1J protein-coding 626030730 LOC116908321 5S ribosomal RNA 8 96867151 96867269 - 116908321 MODEL JAAIVD010000027 pseudo 626030731 LOC116884355 TATA-binding protein-associated factor 2N-like 15 37245673 37248467 - 22301074;30032202 116884355 MODEL JAAIVD010000010;XM_032885483 XP_032741374 protein-coding 626030735 LOC116907055 olfactory receptor 8B3-like 8 32403126 32404088 + 22301074;30032202 116907055 MODEL JAAIVD010000027;XM_032910009 XP_032765900 protein-coding 626030739 Mtmr6 myotubularin related protein 6 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); nuclear envelope (ortholog) 12 64114556 64151012 - 22301074;30032202 116913450 MODEL JAAIVD010000007;XM_032917650 XP_032773541 myotubularin-related protein 6 protein-coding 626030757 Camk2g calcium/calmodulin dependent protein kinase II gamma ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN calcium ion transport (ortholog); G1/S transition of mitotic cell cycle (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; N-cadherin signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 59 (ortholog); intellectual disability (ortholog); FOUND IN calcium- and calmodulin-dependent protein kinase complex (ortholog); glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) 12 90541583 90599894 - 22301074;30032202 116914061 MODEL JAAIVD010000007;XM_032918346;XM_032918347;XM_032918348;XM_032918349;XM_032918350;XM_032918351;XM_032918352;XM_032918353;XM_032918354;XM_032918355;XM_032918357;XM_032918358;XM_032918359;XM_032918360;XM_032918361;XM_032918362;XM_032918363;XM_032918364;XR_004389663 XP_032774237;XP_032774238;XP_032774239;XP_032774240;XP_032774241;XP_032774242;XP_032774243;XP_032774244;XP_032774245;XP_032774246;XP_032774248;XP_032774249;XP_032774250;XP_032774251;XP_032774252;XP_032774253;XP_032774254;XP_032774255 calcium/calmodulin-dependent protein kinase type II subunit gamma protein-coding 626030807 LOC116888908 elongation factor 1-gamma-like X 10737109 10759079 + 116888908 MODEL JAAIVD010000014 pseudo 626030808 Nubp2 NUBP iron-sulfur cluster assembly factor 2, cytosolic PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 2163131 2166912 - 22301074;30032202 116909913 MODEL JAAIVD010000002;XM_032913674;XM_032913675 XP_032769565;XP_032769566 cytosolic Fe-S cluster assembly factor NUBP2;nucleotide binding protein 2 protein-coding 626030823 Atp6v0b ATPase H+ transporting V0 subunit b FOUND IN endosome (ortholog); membrane (ortholog); proton-transporting V-type ATPase complex (ortholog) 1 39134556 39137576 + 22301074 116898032 MODEL JAAIVD010000025;XM_032899425 XP_032755316 V-type proton ATPase 21 kDa proteolipid subunit protein-coding 626030835 LOC116895407 60S ribosomal protein L15-like 3 61212538 61213157 + 116895407 MODEL JAAIVD010000012 pseudo 626030836 LOC116900180 glyceraldehyde-3-phosphate dehydrogenase-like 5 35298734 35299740 - 116900180 MODEL JAAIVD010000023 pseudo 626030837 Sbk3 SH3 domain binding kinase family member 3 2 177547695 177551780 - 22301074;30032202 116894547 MODEL JAAIVD010000001;XM_032896255 XP_032752146 uncharacterized serine/threonine-protein kinase SBK3 protein-coding 626030843 Gfi1b growth factor independent 1B transcriptional repressor ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of granulocyte differentiation (ortholog); regulation of erythrocyte differentiation (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN nuclear matrix (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 8051394 8063978 + 30032202 116900065 MODEL JAAIVD010000023;XM_032901854;XM_032901856 XP_032757745;XP_032757747 zinc finger protein Gfi-1b protein-coding 626030860 Fyb1 FYN binding protein 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN protein localization to plasma membrane (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Thrombocytopenia 3 (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog) 3 173810797 173953228 - 22301074;30032202 116897148 MODEL JAAIVD010000012;XM_032898816 XP_032754707 FYN-binding protein 1 protein-coding 626030883 LOC116906828 glutathione S-transferase alpha-2 8 72472930 72486629 + 22301074;30032202 116906828 MODEL JAAIVD010000027;XM_032909713 XP_032765604 protein-coding 626030894 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41671907 41671979 + 116884210 MODEL JAAIVD010000009 trna 626030895 Cenpa centromere protein A INVOLVED IN CENP-A containing chromatin assembly (ortholog); establishment of mitotic spindle orientation (ortholog); kinetochore assembly (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN CENP-A containing chromatin (ortholog); CENP-A containing nucleosome (ortholog); chromosome, centromeric region (ortholog) 7 23405465 23412411 - 22301074;30032202 116906003 MODEL JAAIVD010000026;XM_032909041;XM_032909042 XP_032764932;XP_032764933 histone H3-like centromeric protein A protein-coding 626030907 Znf775 zinc finger protein 775 6 92348089 92364938 - 30032202 116903851 MODEL JAAIVD010000024;XM_032906582;XM_032906583 XP_032762473;XP_032762474 protein-coding 626030918 LOC116910677 small nucleolar RNA SNORA4 9 58950146 58950289 - 116910677 MODEL JAAIVD010000002;XR_004389208 snorna 626030921 LOC116894536 vomeronasal type-2 receptor 116-like 2 176183830 176202234 - 116894536 MODEL JAAIVD010000001 pseudo 626030922 Pigb phosphatidylinositol glycan anchor biosynthesis class B ENCODES a protein that exhibits alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 80 (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome 1 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 67351730 67375902 - 30032202 116908291 MODEL JAAIVD010000027;XM_032911554 XP_032767445 GPI mannosyltransferase 3 protein-coding 626030938 Gprc5a G protein-coupled receptor class C group 5 member A INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN nucleolus (ortholog); plasma membrane (ortholog); vesicle (ortholog) 6 14360552 14379582 - 22301074;30032202 116903163 MODEL JAAIVD010000024;XM_032905530 XP_032761421 retinoic acid-induced protein 3 protein-coding 626030946 LOC116893351 60S ribosomal protein L29-like 2 157398430 157414222 - 116893351 MODEL JAAIVD010000001 pseudo 626030947 LOC116893189 ankyrin repeat domain-containing protein 49-like 2 104047325 104050241 - 116893189 MODEL JAAIVD010000001 pseudo 626030948 LOC116906949 olfactory receptor 7D4-like 8 16514346 16515275 - 22301074;30032202 116906949 MODEL JAAIVD010000027;XM_032909869 XP_032765760 protein-coding 626030951 Kdm2b lysine demethylase 2B ENCODES a protein that exhibits histone H3K36 demethylase activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); embryonic camera-type eye morphogenesis (ortholog); forebrain development (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 16 30834088 30960270 + 22301074;30032202 116885280 MODEL JAAIVD010000004;XM_032886511;XM_032886512;XM_032886513;XM_032886514;XM_032886515;XM_032886516;XM_032886517;XM_032886518;XM_032886519 XP_032742402;XP_032742403;XP_032742404;XP_032742405;XP_032742406;XP_032742407;XP_032742408;XP_032742409;XP_032742410 lysine-specific demethylase 2B protein-coding 626031003 Arfgef1 ARF guanine nucleotide exchange factor 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); Golgi organization (ortholog); negative regulation of actin filament polymerization (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, IMPAIRED SPEECH, AND BEHAVIORAL ABNORMALITIES, WITH OR WITHOUT SEIZURES (ortholog); Developmental Disabilities (ortholog); Developmental Disease (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 144919227 145013451 - 22301074 116903886 MODEL JAAIVD010000025;XM_032906650 XP_032762541 ADP ribosylation factor guanine nucleotide exchange factor 1;brefeldin A-inhibited guanine nucleotide-exchange protein 1 protein-coding 626031046 LOC116889803 jupiter microtubule associated homolog 1-like 1 149540801 149541493 - 30032202 116889803 MODEL JAAIVD010000025;XM_032890653 XP_032746544 protein-coding 626031051 Sp3 Sp3 transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); definitive hemopoiesis (ortholog); embryonic camera-type eye morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 50283240 50326974 - 30032202 116901514 MODEL JAAIVD010000023;XM_032903488;XM_032903489 XP_032759379;XP_032759380 transcription factor Sp3 protein-coding 626031063 Tex26 testis expressed 26 16 4392652 4431560 - 30032202 116885777 MODEL JAAIVD010000004;XM_032887099 XP_032742990 testis-expressed protein 26 protein-coding 626031073 LOC116891888 cyclin-dependent kinase 11B 1 5047107 5073313 - 22301074;30032202 116891888 MODEL JAAIVD010000025;XM_032893301 XP_032749192 protein-coding 626031097 Miip migration and invasion inhibitory protein 1 12906908 12911985 + 22301074;30032202 116892941 MODEL JAAIVD010000025;XM_032894889 XP_032750780 migration and invasion-inhibitory protein protein-coding 626031110 LOC116899581 nuclear autoantigen Sp-100-like 4 157805762 157869776 + 22301074;30032202 116899581 MODEL JAAIVD010000003;XM_032901521 XP_032757412 protein-coding 626031138 Ptgir prostaglandin I2 receptor INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin I2 signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); heart disease (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 172182700 172185077 - 30032202 116892579 MODEL JAAIVD010000001;XM_032894359 XP_032750250 prostacyclin receptor protein-coding 626031144 Pla2g2a phospholipase A2 group IIA ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); phospholipase A2 activity (ortholog); phospholipid binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); defense response to Gram-positive bacterium (ortholog); intestinal stem cell homeostasis (ortholog); PARTICIPATES IN glypican signaling pathway; indometacin pharmacodynamics pathway; indometacin pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Adrenal Insufficiency (ortholog); adult respiratory distress syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 1 19365043 19367704 - 22301074;30032202 116886536 MODEL JAAIVD010000025;XM_032888059;XM_032888064 XP_032743950;XP_032743955 phospholipase A2, membrane associated protein-coding 626031156 Unc13a unc-13 homolog A ENCODES a protein that exhibits calmodulin binding (ortholog); diacylglycerol binding (ortholog); identical protein binding (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); dense core granule docking (ortholog); dense core granule priming (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); excitatory synapse (ortholog) 13 13294786 13341784 + 22301074;30032202 116915043 MODEL JAAIVD010000008;XM_032919448;XM_032919449;XM_032919450;XM_032919451;XM_032919452;XM_032919453;XM_032919454;XM_032919455 XP_032775339;XP_032775340;XP_032775341;XP_032775342;XP_032775343;XP_032775344;XP_032775345;XP_032775346 protein unc-13 homolog A protein-coding 626031217 Saxo5 stabilizer of axonemal microtubules 5 16 1399507 1409736 + 116885959 MODEL JAAIVD010000004;XM_032887277 XP_032743168 Tex45 testis expressed 45;testis-expressed protein 45 protein-coding 626031227 B4galnt1 beta-1,4-N-acetyl-galactosaminyltransferase 1 ENCODES a protein that exhibits (N-acetylneuraminyl)-galactosylglucosylceramide N-acetylgalactosaminyltransferase activity (ortholog); acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); ganglioside biosynthetic process (ortholog); glycosphingolipid biosynthetic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); hereditary spastic paraplegia 26 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 205601491 205608488 + 22301074;30032202 116909847 MODEL JAAIVD010000025;XM_032913576;XM_032913582;XM_032913590 XP_032769467;XP_032769473;XP_032769481 beta-1,4 N-acetylgalactosaminyltransferase 1 protein-coding 626031248 LOC116905692 alpha-enolase-like 7 58391476 58392643 - 116905692 MODEL JAAIVD010000026 pseudo 626031249 Tp63 tumor protein p63 ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); cellular senescence (ortholog); PARTICIPATES IN altered p53 signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); ADULT syndrome (ortholog); Ankyloblepharon Filiforme Adnatum (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); dendrite (ortholog) 4 10567567 10764660 + 22301074;30032202 116897828 MODEL JAAIVD010000003;XM_032899239;XM_032899241;XM_032899242;XM_032899243;XM_032899244;XM_032899245;XM_032899246;XM_032899247;XM_032899248;XM_032899249 XP_032755130;XP_032755132;XP_032755133;XP_032755134;XP_032755135;XP_032755136;XP_032755137;XP_032755138;XP_032755139;XP_032755140 tumor protein 63 protein-coding 626031285 LOC116892952 A-kinase anchor protein 7 2 211228112 211258432 - 30032202 116892952 MODEL JAAIVD010000001;XM_032894902;XM_032894903;XM_032894904 XP_032750793;XP_032750794;XP_032750795 protein-coding 626031296 Birc6 baculoviral IAP repeat containing 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN labyrinthine layer development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); autism spectrum disorder (ortholog); cholangiocarcinoma (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); microtubule organizing center (ortholog) 7 18544267 18736016 - 22301074;30032202 116905929 MODEL JAAIVD010000026;XM_032908918;XM_032908919;XM_032908920 XP_032764809;XP_032764810;XP_032764811 baculoviral IAP repeat-containing protein 6 protein-coding 626031378 LOC116887103 keratin-associated protein 10-10-like 18 1037144 1037887 - 22301074;30032202 116887103 MODEL JAAIVD010000013;XM_032888636;XM_032888637 XP_032744527;XP_032744528 keratin-associated protein 10-3-like protein-coding 626031385 Cpt1b carnitine palmitoyltransferase 1B ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); carnitine shuttle (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; forkhead class A signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Diabetes Mellitus (ortholog); Liver Neoplasms (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 1 258723173 258732589 - 30032202 116915136 MODEL JAAIVD010000025;XM_032919565;XM_032919566 XP_032775456;XP_032775457 carnitine O-palmitoyltransferase 1, muscle isoform protein-coding 626031411 LOC116899739 U5 spliceosomal RNA 4 37792336 37792428 - 116899739 MODEL JAAIVD010000003;XR_004387755 snrna 626031414 Stk17b serine/threonine kinase 17b ENCODES a protein that exhibits ATP binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); intracellular signal transduction (ortholog); positive regulation of fibroblast apoptotic process (ortholog); FOUND IN actin cytoskeleton (ortholog); Flemming body (ortholog); nucleoplasm (ortholog) 4 128473875 128504585 - 22301074;30032202 116899384 MODEL JAAIVD010000003;XM_032901103 XP_032756994 serine/threonine-protein kinase 17B protein-coding 626031426 Phpt1 phosphohistidine phosphatase 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium channel inhibitor activity (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); lamellipodium organization (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; FOUND IN cytosol (ortholog); leading edge of lamellipodium (ortholog); nuclear body (ortholog) 5 11603745 11605644 + 30032202 116901290 MODEL JAAIVD010000023;XM_032903079;XR_004387973 XP_032758970 14 kDa phosphohistidine phosphatase protein-coding 626031436 Dnajb3 DnaJ heat shock protein family (Hsp40) member B3 FOUND IN acrosomal vesicle (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 160238891 160239934 - 30032202 116899621 MODEL JAAIVD010000003;XM_032901583 XP_032757474 dnaJ homolog subfamily B member 3 protein-coding 626031441 LOC116900042 transcription factor BTF3-like 5 14584560 14585087 + 116900042 MODEL JAAIVD010000023 pseudo 626031442 Tpra1 transmembrane protein adipocyte associated 1 INVOLVED IN embryonic cleavage (ortholog); negative regulation of mitotic cell cycle phase transition (ortholog); FOUND IN plasma membrane (ortholog) 6 57421081 57431757 - 30032202 116903515 MODEL JAAIVD010000024;XM_032906120;XM_032906121;XM_032906122;XM_032906123 XP_032762011;XP_032762012;XP_032762013;XP_032762014 transmembrane protein adipocyte-associated 1 protein-coding 626031466 LOC116898170 40S ribosomal protein S7-like 4 124650923 124651496 - 116898170 MODEL JAAIVD010000003 pseudo 626031467 Dcc DCC netrin 1 receptor ENCODES a protein that exhibits identical protein binding (ortholog); netrin receptor activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); amenorrhea (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); growth cone membrane (ortholog); postsynaptic density membrane (ortholog) 15 59597314 60671808 + 22301074;30032202 116884996 MODEL JAAIVD010000010;XM_032886223 XP_032742114 netrin receptor DCC protein-coding 626031500 Dnajc14 DnaJ heat shock protein family (Hsp40) member C14 ENCODES a protein that exhibits dopamine receptor binding (ortholog); G protein-coupled receptor binding (ortholog) 1 156279652 156290899 + 30032202 116906549 MODEL JAAIVD010000025;XM_032909264 XP_032765155 dnaJ homolog subfamily C member 14 protein-coding 626031511 LOC116897910 killer cell lectin-like receptor 5 4 35479985 35500036 + 116897910 MODEL JAAIVD010000003;XM_032899313 XP_032755204 protein-coding 626031518 Spen spen family transcriptional repressor ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); brain disease (ortholog); breast ductal carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) 1 16608272 16678285 + 30032202 116893339 MODEL JAAIVD010000025;XM_032895153 XP_032751044 msx2-interacting protein protein-coding 626031537 LOC116912004 40S ribosomal protein SA-like 11 53618645 53619002 - 116912004 MODEL JAAIVD010000006 pseudo 626031538 LOC116911868 U4 spliceosomal RNA 10 93127721 93127899 - 116911868 MODEL JAAIVD010000005 pseudo 626031539 LOC116889210 activated RNA polymerase II transcriptional coactivator p15-like X 121142223 121142651 + 116889210 MODEL JAAIVD010000014 pseudo 626031540 Treml4 triggering receptor expressed on myeloid cells like 4 INVOLVED IN intracellular protein localization (ortholog); phagocytosis, engulfment (ortholog); positive regulation of defense response to virus by host (ortholog); FOUND IN endoplasmic reticulum (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) 4 81648225 81669444 - 30032202 116898401 MODEL JAAIVD010000003;XM_032899688 XP_032755579 trem-like transcript 4 protein protein-coding 626031549 Dusp15 dual specificity phosphatase 15 ENCODES a protein that exhibits phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 132261104 132271695 - 22301074;30032202 116902130 MODEL JAAIVD010000023;XM_032904456 XP_032760347 dual specificity protein phosphatase 15 protein-coding 626031560 Arl10 ARF like GTPase 10 FOUND IN mitochondrion (ortholog) 14 72916084 72924531 + 22301074 116883659 MODEL JAAIVD010000009;XM_032884854 XP_032740745 ADP ribosylation factor like GTPase 10;ADP-ribosylation factor-like protein 10 protein-coding 626031568 LOC116906907 olfactory receptor 150-like 8 82602699 82603791 + 22301074;30032202 116906907 MODEL JAAIVD010000027;XM_032909823;XM_032909824 XP_032765714;XP_032765715 protein-coding 626031576 LOC116895320 ornithine aminotransferase, mitochondrial-like 3 30483940 30485229 - 116895320 MODEL JAAIVD010000012 pseudo 626031577 LOC116914867 zinc finger protein 136-like 13 13831929 13850644 + 116914867 MODEL JAAIVD010000008 pseudo 626031578 Lrrn4cl LRRN4 C-terminal like 2 9094114 9095196 - 22301074 116893631 MODEL JAAIVD010000001;XM_032895344 XP_032751235 LRRN4 C-terminal-like protein protein-coding 626031583 LOC116898176 calcyclin-binding protein-like 4 127597525 127604878 - 116898176 MODEL JAAIVD010000003 pseudo 626031584 Mpv17l MPV17 mitochondrial inner membrane protein like INVOLVED IN negative regulation of hydrogen peroxide biosynthetic process (ortholog); negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); reactive oxygen species metabolic process (ortholog); FOUND IN peroxisome (ortholog) 9 9011854 9031257 - 22301074;30032202 116909124 MODEL JAAIVD010000002;XM_032912599;XR_004389051 XP_032768490 mpv17-like protein protein-coding 626031595 Cblb Cbl proto-oncogene B ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); immune response (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH Experimental Arthritis (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); infantile onset multisystem autoimmune disease 3 (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 4 36307209 36470454 + 22301074;30032202 116898891 MODEL JAAIVD010000003;XM_032900287;XM_032900288 XP_032756178;XP_032756179 E3 ubiquitin-protein ligase CBL-B protein-coding 626031619 Slc66a1 solute carrier family 66 member 1 ENCODES a protein that exhibits basic amino acid transmembrane transporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); INVOLVED IN intracellular amino acid homeostasis (ortholog); L-arginine transmembrane transport (ortholog); L-histidine transmembrane transport (ortholog); ASSOCIATED WITH cystinosis (ortholog); FOUND IN lysosomal membrane (ortholog); organelle membrane (ortholog) 1 18891998 18899025 + 116893724 MODEL JAAIVD010000025;XM_032895442 XP_032751333 lysosomal amino acid transporter 1 homolog protein-coding 626031630 LOC116913252 PRELI domain-containing protein 1, mitochondrial-like 12 83680861 83681730 + 116913252 MODEL JAAIVD010000007 pseudo 626031631 LOC116888038 protein crumbs homolog 1-like X 84561113 84563755 - 116888038 MODEL JAAIVD010000014 pseudo 626031632 LOC116892497 zinc finger protein 235-like 2 170570441 170592446 - 30032202 116892497 MODEL JAAIVD010000001;XM_032894242;XM_032894243 XP_032750133;XP_032750134 protein-coding 626031643 LOC116914365 PRELI domain-containing protein 1, mitochondrial-like 13 76176411 76177347 - 116914365 MODEL JAAIVD010000008 pseudo 626031644 Dnase1l3 deoxyribonuclease 1L3 ENCODES a protein that exhibits DNA binding (ortholog); DNA endonuclease activity (ortholog); endonuclease activity (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); neutrophil activation involved in immune response (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleus (ortholog) 12 78401656 78427080 - 22301074;30032202 116913463 MODEL JAAIVD010000007;XM_032917667 XP_032773558 deoxyribonuclease 1 like 3;deoxyribonuclease gamma protein-coding 626031656 Cfap410 cilia and flagella associated protein 410 INVOLVED IN cilium assembly (ortholog); cytoskeleton organization (ortholog); regulation of cell shape (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); axial spondylometaphyseal dysplasia (ortholog); cone dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 1269020 1275269 + 22301074;30032202 116887286 MODEL JAAIVD010000013;XM_032888866 XP_032744757 cilia- and flagella-associated protein 410 protein-coding 626031667 Nudcd3 NudC domain containing 3 INVOLVED IN cilium assembly (ortholog); protein localization to pericentriolar material (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) 11 75046431 75128061 - 30032202 116912873 MODEL JAAIVD010000006;XM_032917104 XP_032772995 nudC domain-containing protein 3 protein-coding 626031677 Helt helt bHLH transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system development (ortholog); GABAergic neuron differentiation (ortholog); GABAergic neuron differentiation in basal ganglia (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 13 41624342 41626269 + 22301074;30032202 116914225 MODEL JAAIVD010000008;XM_032918419;XM_032918420 XP_032774310;XP_032774311 hairy and enhancer of split-related protein HELT protein-coding 626031686 Ddx1 DEAD-box helicase 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA/RNA helicase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN double-strand break repair (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of myeloid dendritic cell cytokine production (ortholog); ASSOCIATED WITH endometrial hyperplasia (ortholog); human immunodeficiency virus infectious disease (ortholog); substance-related disorder (ortholog); FOUND IN cleavage body (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 7 33161556 33192522 - 22301074 116904885 MODEL JAAIVD010000026;XM_032907487 XP_032763378 ATP-dependent RNA helicase DDX1 protein-coding 626031716 LOC116884325 protein FAM136A-like 15 64209564 64210053 - 116884325 MODEL JAAIVD010000010 pseudo 626031717 LOC116898083 mRNA turnover protein 4 homolog 4 92474925 92475620 + 116898083 MODEL JAAIVD010000003 pseudo 626031718 Clta clathrin light chain A ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); GTPase binding (ortholog); peptide binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN clathrin coat (ortholog); clathrin complex (ortholog); clathrin-coated pit (ortholog) 1 2485442 2504772 - 22301074;30032202 116890911 MODEL JAAIVD010000025;XM_032891542;XM_032891551;XM_032891560;XM_032891569 XP_032747433;XP_032747442;XP_032747451;XP_032747460 protein-coding 626031736 LOC116915184 small nucleolar RNA SNORA70 13 40580531 40580664 - 116915184 MODEL JAAIVD010000008;XR_004389843 snorna 626031739 She Src homology 2 domain containing E 3 63800796 63822487 - 30032202 116895424 MODEL JAAIVD010000012;XM_032896703 XP_032752594 SH2 domain-containing adapter protein E protein-coding 626031748 Dlgap3 DLG associated protein 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); molecular adaptor activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); modulation of chemical synaptic transmission (ortholog); protein-containing complex assembly (ortholog); FOUND IN cholinergic synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 1 31044829 31087185 - 22301074;30032202 116896452 MODEL JAAIVD010000025;XM_032897612;XM_032897620 XP_032753503;XP_032753511 disks large-associated protein 3 protein-coding 626031765 LOC116894400 keratin-associated protein 20-2-like 2 157187165 157187323 + 116894400 MODEL JAAIVD010000001;XM_032896108 XP_032751999 protein-coding 626031768 Cep68 centrosomal protein 68 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cell junction (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 11 88508341 88529974 - 116912795 MODEL JAAIVD010000006;XM_032916959;XM_032916960 XP_032772850;XP_032772851 centrosomal protein of 68 kDa protein-coding 626031782 Sulf1 sulfatase 1 ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylglucosamine-6-sulfatase activity (ortholog); INVOLVED IN bone development (ortholog); cartilage development (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ovarian Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 1 147345324 147506512 + 22301074;30032202 116903955 MODEL JAAIVD010000025;XM_032906745 XP_032762636 extracellular sulfatase Sulf-1 protein-coding 626031808 Ltbr lymphotoxin beta receptor ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); myeloid dendritic cell differentiation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autosomal recessive pseudohypoaldosteronism type 1 (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); malaria (ortholog); FOUND IN Golgi apparatus (ortholog) 6 22589295 22595607 + 22301074;30032202 116903251 MODEL JAAIVD010000024;XM_032905630;XM_032905632 XP_032761521;XP_032761523 tumor necrosis factor receptor superfamily member 3 protein-coding 626031826 LOC116914537 pulmonary surfactant-associated protein A 13 19653610 19656923 + 30032202 116914537 MODEL JAAIVD010000008;XM_032918866;XM_032918867;XM_032918868;XM_032918869 XP_032774757;XP_032774758;XP_032774759;XP_032774760 protein-coding 626031842 Slc1a5 solute carrier family 1 member 5 ENCODES a protein that exhibits antiporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); L-glutamine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); glutamine secretion (ortholog); glutamine transport (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH COVID-19 (ortholog); esophagus squamous cell carcinoma (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN basal plasma membrane (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 2 172292506 172307122 - 22301074;30032202 116892573 MODEL JAAIVD010000001;XM_032894352 XP_032750243 neutral amino acid transporter B(0) protein-coding 626031854 LOC116898186 heterogeneous nuclear ribonucleoprotein A1-like 4 132560797 132561753 + 116898186 MODEL JAAIVD010000003 pseudo 626031855 LOC116896515 histone H2A type 2-C 3 61043351 61065589 + 22301074;30032202 116896515 MODEL JAAIVD010000012;XM_032897697 XP_032753588 protein-coding 626031861 LOC116885904 mucin-3A-like 16 16762179 16772021 + 116885904 MODEL JAAIVD010000004;XM_032887220 XP_032743111 protein-coding 626031867 Rho rhodopsin ENCODES a protein that exhibits retinal binding (ortholog); spectrin binding (ortholog); INVOLVED IN cellular response to light stimulus (ortholog); detection of light stimulus (ortholog); detection of temperature stimulus involved in thermoception (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Coats disease (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 14 (ortholog); FOUND IN cell-cell junction (ortholog); Golgi apparatus (ortholog); photoreceptor disc membrane (ortholog) 6 30793145 30798434 - 22301074;30032202 116904630 MODEL JAAIVD010000024;XM_032907422 XP_032763313 protein-coding 626031876 Hoxa6 homeobox A6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 6 88849153 88857458 + 22301074;30032202 116903805 MODEL JAAIVD010000024;XM_032906503;XM_032906504;XM_032906506 XP_032762394;XP_032762395;XP_032762397 homeobox protein Hox-A6 protein-coding 626031888 LOC116900816 glyceraldehyde-3-phosphate dehydrogenase-like 5 36456075 36504372 + 116900816 MODEL JAAIVD010000023 pseudo 626031889 Acvr1 activin A receptor type 1 ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity, type I (ortholog); ATP binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); acute inflammatory response (ortholog); atrial septum primum morphogenesis (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); bicuspid aortic valve disease (ortholog); Breast Neoplasms (ortholog); FOUND IN activin receptor complex (ortholog); apical part of cell (ortholog); plasma membrane (ortholog) 5 36235075 36304642 - 22301074;30032202 116901430 MODEL JAAIVD010000023;XM_032903323 XP_032759214 activin receptor type-1 protein-coding 626031903 LOC116899646 signal peptidase complex subunit 3-like 4 164434498 164436783 - 116899646 MODEL JAAIVD010000003 pseudo 626031904 LOC116889291 60S ribosomal protein L39-like X 94524880 94525075 - 22301074;30032202 116889291 MODEL JAAIVD010000014;XM_032890422 XP_032746313 protein-coding 626031909 Wfdc5 WAP four-disulfide core domain 5 5 153798514 153803572 + 22301074 116900788 MODEL JAAIVD010000023;XM_032902499 XP_032758390 WAP four-disulfide core domain protein 5 protein-coding 626031917 Grk3 G protein-coupled receptor kinase 3 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); D1 dopamine receptor binding (ortholog); G protein-coupled receptor kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); inositol phosphate metabolic process (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH bipolar disorder (ortholog); Cardiomegaly (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN axon terminus (ortholog); dendrite terminus (ortholog); dendritic shaft (ortholog) 16 40964557 41072559 + 22301074;30032202 116885356 MODEL JAAIVD010000004;XM_032886630 XP_032742521 beta-adrenergic receptor kinase 2 protein-coding 626031942 LOC116904777 U2 spliceosomal RNA 6 33088619 33088808 + 116904777 MODEL JAAIVD010000024;XR_004388441 snrna 626031945 LOC116895848 P2Y purinoceptor 3-like 3 87460742 87639918 + 116895848 MODEL JAAIVD010000012 pseudo 626031946 Mocos molybdenum cofactor sulfurase ENCODES a protein that exhibits molybdenum cofactor sulfurtransferase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (ortholog); molybdopterin cofactor biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); obstructive nephropathy (ortholog) 15 19176553 19221499 - 22301074 116884797 MODEL JAAIVD010000010;XM_032886031 XP_032741922 protein-coding 626031965 LOC116889256 60S ribosomal protein L31-like X 13270433 13270818 + 116889256 MODEL JAAIVD010000014 pseudo 626031966 LOC116889698 tyrosine--tRNA ligase-like 22301074;30032202 116889698 MODEL JAAIVD010000052;XM_032890584 XP_032746475 protein-coding 626031967 Rsph6a radial spoke head 6 homolog A INVOLVED IN manchette disassembly (ortholog); sperm flagellum assembly (ortholog); FOUND IN axoneme (ortholog); radial spoke (ortholog); radial spoke head (ortholog) 2 171550446 171569443 - 22301074;30032202 116892554 MODEL JAAIVD010000001;XM_032894331;XM_032894332;XM_032894333 XP_032750222;XP_032750223;XP_032750224 radial spoke head protein 6 homolog A protein-coding 626031982 LOC116886745 small nucleolar RNA SNORA17 17 24364909 24365021 - 116886745 MODEL JAAIVD010000011 pseudo 626031983 Epdr1 ependymin related 1 ENCODES a protein that exhibits ganglioside GM1 binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN myofibroblast contraction (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); FOUND IN extracellular region (ortholog); lysosome (ortholog) 14 38334547 38359096 - 22301074;30032202 116883604 MODEL JAAIVD010000009;XM_032884788 XP_032740679 mammalian ependymin-related protein 1 protein-coding 626031990 Pfdn2 prefoldin subunit 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein folding chaperone (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); positive regulation of cytoskeleton organization (ortholog); protein folding (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 50510688 50527241 + 22301074;30032202 116910852 MODEL JAAIVD010000005;XM_032914609 XP_032770500 protein-coding 626031998 LOC116887435 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8368168 8368743 + 116887435 MODEL JAAIVD010000013 pseudo 626031999 LOC116896917 uncharacterized LOC116896917 1 33776239 33779479 + 116896917 MODEL JAAIVD010000025;XR_004387378 ncrna 626032004 Cpox coproporphyrinogen oxidase ENCODES a protein that exhibits coproporphyrinogen oxidase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondrial inner membrane (ortholog) 4 42638764 42648675 + 22301074;30032202 116898915 MODEL JAAIVD010000003;XM_032900324 XP_032756215 oxygen-dependent coproporphyrinogen-III oxidase, mitochondrial protein-coding 626032015 Hip1 huntingtin interacting protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); AP-2 adaptor complex binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); clathrin coat assembly (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 16 18476398 18606670 + 30032202 116885485 MODEL JAAIVD010000004;XM_032886775 XP_032742666 huntingtin-interacting protein 1 protein-coding 626032050 LOC116903450 igE-binding protein-like 1 138572880 138624264 + 22301074 116903450 MODEL JAAIVD010000025;XM_032906041 XP_032761932 protein-coding 626032056 Fam98a family with sequence similarity 98 member A ENCODES a protein that exhibits protein methyltransferase activity (ortholog); INVOLVED IN lysosome localization (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of gene expression (ortholog) 7 17744843 17759423 + 30032202 116905918 MODEL JAAIVD010000026;XM_032908905;XM_032908906 XP_032764796;XP_032764797 protein FAM98A protein-coding 626032071 Cacnb3 calcium voltage-gated channel auxiliary subunit beta 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Nerve Injuries (ortholog); ovarian cyst (ortholog); FOUND IN apical plasma membrane (ortholog); L-type voltage-gated calcium channel complex (ortholog); membrane (ortholog) 1 271458765 271471198 + 22301074;30032202 116884761 MODEL JAAIVD010000025;XM_032885981;XM_032885987 XP_032741872;XP_032741878 voltage-dependent L-type calcium channel subunit beta-3 protein-coding 626032091 LOC116910738 small nucleolar RNA U13 9 3523230 3523333 - 116910738 MODEL JAAIVD010000002;XR_004389252 snorna 626032094 LOC116910766 U6 spliceosomal RNA 9 87622322 87622434 + 116910766 MODEL JAAIVD010000002 pseudo 626032095 LOC116914921 low molecular weight phosphotyrosine protein phosphatase-like 13 452793 453335 + 116914921 MODEL JAAIVD010000008 pseudo 626032096 LOC116889505 small nucleolar RNA SNORA48 X 114590376 114590515 - 116889505 MODEL JAAIVD010000014;XR_004386451 snorna 626032099 Nts neurotensin ENCODES a protein that exhibits neuropeptide receptor binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to lithium ion (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Bradycardia (ortholog); breast ductal carcinoma (ortholog); Catalepsy (ortholog); FOUND IN axon terminus (ortholog); neuronal cell body (ortholog) 1 180862549 180872521 - 22301074;30032202 116890001 MODEL JAAIVD010000025;XM_032890788 XP_032746679 neurotensin/neuromedin N protein-coding 626032107 Lpl lipoprotein lipase ENCODES a protein that exhibits apolipoprotein binding (ortholog); calcium ion binding (ortholog); heparan sulfate proteoglycan binding (ortholog); INVOLVED IN cellular response to fatty acid (ortholog); cellular response to nutrient (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Alcoholic Liver Diseases (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN catalytic complex (ortholog); cell surface (ortholog); extracellular region (ortholog) 13 20546274 20567849 - 22301074;30032202 116914805 MODEL JAAIVD010000008;XM_032919259 XP_032775150 protein-coding 626032120 LOC116900312 olfactory receptor 8H1-like 5 64139802 64140767 - 22301074;30032202 116900312 MODEL JAAIVD010000023;XM_032902068 XP_032757959 protein-coding 626032123 LOC116892500 zinc finger protein 235-like 2 170482738 170489813 - 22301074 116892500 MODEL JAAIVD010000001;XM_032894247 XP_032750138 protein-coding 626032130 Sys1 SYS1 golgi trafficking protein ASSOCIATED WITH multiple sclerosis (ortholog) 5 153477368 153504084 - 30032202 116902360 MODEL JAAIVD010000023;XM_032904854;XM_032904855 XP_032760745;XP_032760746 protein SYS1 homolog protein-coding 626032142 Oxsr1 oxidative stress responsive kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); ion channel regulator activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 110469433 110558904 - 22301074 116907909 MODEL JAAIVD010000027;XM_032911108 XP_032766999 serine/threonine-protein kinase OSR1 protein-coding 626032164 LOC116893169 olfactory receptor 51A4-like 2 102977138 102978079 - 116893169 MODEL JAAIVD010000001 pseudo 626032165 LOC116915179 U6 spliceosomal RNA 13 61539288 61539390 - 116915179 MODEL JAAIVD010000008;XR_004389838 snrna 626032168 Btbd19 BTB domain containing 19 1 40744763 40751314 - 22301074 116898618 MODEL JAAIVD010000025;XM_032899831;XM_032899840 XP_032755722;XP_032755731 BTB/POZ domain-containing protein 19 protein-coding 626032181 LOC116899740 U6 spliceosomal RNA 4 17394976 17395082 - 116899740 MODEL JAAIVD010000003;XR_004387756 snrna 626032184 Abraxas2 abraxas 2, BRISC complex subunit ENCODES a protein that exhibits microtubule binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); cellular response to freezing (ortholog); chromosome segregation (ortholog); FOUND IN BRISC complex (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 2 68963026 68988086 - 30032202 116891392 MODEL JAAIVD010000001;XM_032892410 XP_032748301 BRISC complex subunit Abraxas 2 protein-coding 626032197 Myo9b myosin IXB ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); ARF protein signal transduction (ortholog); establishment of cell polarity (ortholog); ASSOCIATED WITH celiac disease (ortholog); Familial Prostate Cancer (ortholog); genetic disease (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 13 13642794 13726266 - 22301074;30032202 116915104 MODEL JAAIVD010000008;XM_032919534 XP_032775425 unconventional myosin-IXb protein-coding 626032241 LOC116912024 protein FRG2-like 11 74502765 74504286 + 116912024 MODEL JAAIVD010000006;XM_032915912 XP_032771803 protein-coding 626032247 Dnase1 deoxyribonuclease 1 ENCODES a protein that exhibits deoxyribonuclease I activity (ortholog); DNA nuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); neutrophil activation involved in immune response (ortholog); regulation of acute inflammatory response (ortholog); ASSOCIATED WITH Airway Obstruction (ortholog); autoimmune hepatitis (ortholog); primary biliary cholangitis (ortholog); FOUND IN cytoplasm (ortholog) 9 17816478 17819759 - 22301074;30032202 116908831 MODEL JAAIVD010000002;XM_032912250 XP_032768141 deoxyribonuclease-1 protein-coding 626032260 LOC116894711 vomeronasal type-2 receptor 116-like 2 230111738 230135153 + 22301074;30032202 116894711 MODEL JAAIVD010000001;XM_032896406;XM_032896407;XM_032896408;XM_032896409 XP_032752297;XP_032752298;XP_032752299;XP_032752300 protein-coding 626032275 LOC116887604 uncharacterized LOC116887604 1 49373825 49376954 + 116887604 MODEL JAAIVD010000025;XR_004386225 ncrna 626032279 Arhgap21 Rho GTPase activating protein 21 INVOLVED IN establishment of Golgi localization (ortholog); Golgi organization (ortholog); maintenance of Golgi location (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); Golgi apparatus (ortholog) 14 3139684 3264561 + 22301074;30032202 116883541 MODEL JAAIVD010000009;XM_032884712 XP_032740603 rho GTPase-activating protein 21 protein-coding 626032309 LOC116890480 small Cajal body-specific RNA 16 1 27874354 27874541 + 116890480 MODEL JAAIVD010000025;XR_004386668 ncrna 626032312 LOC116889242 N-lysine methyltransferase KMT5A-like X 98611195 98612286 + 22301074 116889242 MODEL JAAIVD010000014;XM_032890392 XP_032746283 protein-coding 626032315 Rab30 RAB30, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN Golgi organization (ortholog); lipid homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN autolysosome membrane (ortholog); autophagosome membrane (ortholog); cis-Golgi network (ortholog) 2 108358225 108446318 - 22301074;30032202 116891843 MODEL JAAIVD010000001;XM_032893210;XM_032893211;XM_032893212 XP_032749101;XP_032749102;XP_032749103 ras-related protein Rab-30 protein-coding 626032328 Znf526 zinc finger protein 526 ASSOCIATED WITH DENTICI-NOVELLI NEURODEVELOPMENTAL SYNDROME (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 2 169486242 169493253 - 30032202 116892468 MODEL JAAIVD010000001;XM_032894186 XP_032750077 protein-coding 626032334 Nuf2 NUF2 component of NDC80 kinetochore complex ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); ASSOCIATED WITH breast cancer (ortholog); castration-resistant prostate carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytosol (ortholog); kinetochore (ortholog); Ndc80 complex (ortholog) 10 48709253 48737766 - 22301074;30032202 116911652 MODEL JAAIVD010000005;XM_032915608 XP_032771499 kinetochore protein Nuf2 protein-coding 626032352 Slc16a6 solute carrier family 16 member 6 ASSOCIATED WITH endometriosis (ortholog); FOUND IN basolateral plasma membrane (ortholog) 9 69665236 69688591 + 22301074;30032202 116909129 MODEL JAAIVD010000002;XM_032912610;XM_032912611 XP_032768501;XP_032768502 monocarboxylate transporter 7 protein-coding 626032365 LOC116898113 60S ribosomal protein L11-like 4 102170446 102170981 - 116898113 MODEL JAAIVD010000003 pseudo 626032366 LOC116887143 60S ribosomal protein L23a-like 1 38013100 38013616 + 116887143 MODEL JAAIVD010000025 pseudo 626032367 Mtnap1 mitochondrial nucleoid associated protein 1 INVOLVED IN cell population proliferation (ortholog); mitochondrial DNA metabolic process (ortholog); positive regulation of mitochondrial DNA replication (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 9 75612283 75622585 - 116909173 MODEL JAAIVD010000002;XM_032912663;XM_032912665 XP_032768554;XP_032768556 C9H17orf80 chromosome 9 C17orf80 homolog;uncharacterized protein C17orf80 homolog protein-coding 626032379 LOC116896219 metalloendopeptidase OMA1, mitochondrial-like 1 80344465 80403759 + 116896219 MODEL JAAIVD010000025 pseudo 626032380 Dennd4a DENN domain containing 4A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway 8 59116227 59223685 + 22301074;30032202 116907827 MODEL JAAIVD010000027;XM_032911013 XP_032766904 C-myc promoter-binding protein protein-coding 626032418 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 11 81492817 81492902 + 116913057 MODEL JAAIVD010000006 trna 626032419 LOC116899954 ATP synthase F(0) complex subunit C2, mitochondrial-like 5 4378461 4379010 + 22301074;30032202 116899954 MODEL JAAIVD010000023;XM_032901789 XP_032757680 protein-coding 626032422 Gadd45b growth arrest and DNA damage inducible beta INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of JNK cascade (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); skin disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 153951059 153953108 - 30032202 116904685 MODEL JAAIVD010000025;XM_032907439;XM_032907440 XP_032763330;XP_032763331 growth arrest and DNA damage-inducible protein GADD45 beta protein-coding 626032435 Jagn1 jagunal vesicle mediated transporter 1 INVOLVED IN defense response to fungus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); insulin metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); neutropenia (ortholog); severe congenital neutropenia (ortholog); FOUND IN endoplasmic reticulum (ortholog) 6 33087433 33091953 - 22301074;30032202 116903412 MODEL JAAIVD010000024;XM_032905929;XM_032905930 XP_032761820;XP_032761821 jagunal homolog 1;protein jagunal homolog 1 protein-coding 626032445 LOC116909285 cadmium/zinc-transporting ATPase HMA2-like 9 15574927 15583780 + 116909285 MODEL JAAIVD010000002;XM_032912822 XP_032768713 protein-coding 626032450 Bptf bromodomain PHD finger transcription factor ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN histone modification pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN ATPase complex (ortholog); cell body (ortholog); chromatin (ortholog) 9 71998750 72100040 + 30032202 116910357 MODEL JAAIVD010000002;XM_032914211 XP_032770102 nucleosome-remodeling factor subunit BPTF protein-coding 626032482 Elmod2 ELMO domain containing 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of defense response to virus (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) 17 16907685 16924351 + 30032202 116886183 MODEL JAAIVD010000011;XM_032887552;XM_032887553;XM_032887554 XP_032743443;XP_032743444;XP_032743445 ELMO domain-containing protein 2 protein-coding 626032502 Dnajb8 DnaJ heat shock protein family (Hsp40) member B8 ENCODES a protein that exhibits protein folding chaperone (ortholog); protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); protein folding (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 6 58102495 58103491 - 30032202 116902732 MODEL JAAIVD010000024;XM_032905082 XP_032760973 dnaJ homolog subfamily B member 8 protein-coding 626032507 Dspp dentin sialophosphoprotein ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); biomineral tissue development (ortholog); ASSOCIATED WITH Autosomal Dominant Deafness 39 with Dentinogenesis Imperfecta 1 (ortholog); dental pulp calcification (ortholog); dentin dysplasia (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 11 14234073 14238642 + 30032202 116912805 MODEL JAAIVD010000006;XM_032916971 XP_032772862 protein-coding 626032514 Gnaz G protein subunit alpha z ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); G protein-coupled serotonin receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); G protein-coupled serotonin receptor signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; Hedgehog signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); plasma membrane (ortholog) 18 12441154 12491460 - 22301074;30032202 116887012 MODEL JAAIVD010000013;XM_032888499;XM_032888500 XP_032744390;XP_032744391 guanine nucleotide-binding protein G(z) subunit alpha protein-coding 626032524 LOC116914528 protein Spindly-like 1 189301170 189302540 + 116914528 MODEL JAAIVD010000025 pseudo 626032525 LOC116897991 uncharacterized LOC116897991 4 55278171 55280253 + 116897991 MODEL JAAIVD010000003;XR_004387633 ncrna 626032530 LOC116899988 mortality factor 4-like protein 1 5 52351 52936 + 116899988 MODEL JAAIVD010000023 pseudo 626032531 LOC116912866 A disintegrin and metalloproteinase with thrombospondin motifs 3-like 11 3201000 3307704 - 116912866 MODEL JAAIVD010000006;XM_032917084 XP_032772975 protein-coding 626032539 Psmb11 proteasome subunit beta 11 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN CD8-positive, alpha-beta T cell differentiation (ortholog); proteolysis (ortholog); T cell differentiation in thymus (ortholog); FOUND IN proteasome core complex (ortholog) 12 70374630 70376152 - 22301074 116913763 MODEL JAAIVD010000007;XM_032918071 XP_032773962 proteasome subunit beta type-11 protein-coding 626032544 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41792331 41792412 - 116884164 MODEL JAAIVD010000009 trna 626032545 Smad3 SMAD family member 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); adrenal gland development (ortholog); apoptotic process (ortholog); PARTICIPATES IN activin signaling pathway; altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); alcoholic liver cirrhosis (ortholog); Aneurysm (ortholog); FOUND IN chromatin (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 8 57940009 58049107 - 22301074;30032202 116906604 MODEL JAAIVD010000027;XM_032909354;XM_032909355 XP_032765245;XP_032765246 mothers against decapentaplegic homolog 3 protein-coding 626032562 LOC116892797 zinc finger protein 239-like 2 186178057 186194254 - 30032202 116892797 MODEL JAAIVD010000001;XM_032894669;XM_032894670;XM_032894671;XM_032894672 XP_032750560;XP_032750561;XP_032750562;XP_032750563 zinc finger protein 501-like;zinc finger protein 54-like protein-coding 626032582 LOC116884874 ubiquitin-conjugating enzyme E2 C-like 15 4562087 4562593 + 116884874 MODEL JAAIVD010000010 pseudo 626032583 LOC116886990 zinc finger protein 431-like 18 49339271 49340282 - 116886990 MODEL JAAIVD010000013 pseudo 626032584 Cdkl2 cyclin dependent kinase like 2 ASSOCIATED WITH Disease Progression (ortholog); Experimental Mammary Neoplasms (ortholog); Neoplasm Metastasis (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog) 11 4843926 4878598 - 22301074;30032202 116912120 MODEL JAAIVD010000006;XM_032916025;XM_032916026;XM_032916027;XM_032916028;XM_032916029;XM_032916030 XP_032771916;XP_032771917;XP_032771918;XP_032771919;XP_032771920;XP_032771921 cyclin-dependent kinase-like 2 protein-coding 626032614 Asb10 ankyrin repeat and SOCS box containing 10 ASSOCIATED WITH Glaucoma 1, Open Angle, F (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 153732061 153741124 - 22301074;30032202 116903013 MODEL JAAIVD010000024;XM_032905323;XM_032905325 XP_032761214;XP_032761216 ankyrin repeat and SOCS box protein 10 protein-coding 626032629 LOC116891477 uncharacterized LOC116891477 2 74422640 74424571 + 116891477 MODEL JAAIVD010000001;XR_004386839 ncrna 626032633 Gtsf1 gametocyte specific factor 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN piRNA-mediated gene silencing by mRNA destabilization (ortholog); secondary piRNA processing (ortholog); FOUND IN cytoplasm (ortholog); piP-body (ortholog) 1 259662138 259680088 + 116890182 MODEL JAAIVD010000025;XM_032890917;XM_032890918 XP_032746808;XP_032746809 gametocyte-specific factor 1 protein-coding 626032649 LOC116887964 40S ribosomal protein S2-like X 66093847 66103978 + 116887964 MODEL JAAIVD010000014 pseudo 626032650 LOC116904635 mth938 domain-containing protein-like 6 31619764 31620248 + 30032202 116904635 MODEL JAAIVD010000024;XM_032907429;XM_032907430 XP_032763320;XP_032763321 protein-coding 626032660 LOC116893970 folate receptor alpha 2 100153561 100164577 - 30032202 116893970 MODEL JAAIVD010000001;XM_032895688 XP_032751579 protein-coding 626032671 Il5ra interleukin 5 receptor subunit alpha ENCODES a protein that exhibits interleukin-5 receptor activity (ortholog); INVOLVED IN eosinophil differentiation (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN plasma membrane (ortholog) 6 39960476 39991501 + 22301074;30032202 116902690 MODEL JAAIVD010000024;XM_032905044;XM_032905045 XP_032760935;XP_032760936 interleukin-5 receptor subunit alpha protein-coding 626032685 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50261597 50261668 + 116911906 MODEL JAAIVD010000005 trna 626032686 LOC116902937 cytochrome c oxidase subunit 6C-2-like 6 117300654 117301176 + 30032202 116902937 MODEL JAAIVD010000024;XM_032905261 XP_032761152 protein-coding 626032691 LOC116894078 olfactory receptor 52J3-like 2 103100412 103101348 + 22301074 116894078 MODEL JAAIVD010000001;XM_032895801 XP_032751692 protein-coding 626032694 Lmo1 LIM domain only 1 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of T cell homeostatic proliferation (ortholog); ASSOCIATED WITH neuroblastoma (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 2 92322652 92359121 + 30032202 116891681 MODEL JAAIVD010000001;XM_032892940;XM_032892941 XP_032748831;XP_032748832 rhombotin-1 protein-coding 626032705 LOC116913231 ribonuclease pancreatic gamma-type 12 72094062 72094505 - 22301074;30032202 116913231 Q8VD87 MODEL AJ315461;JAAIVD010000007;XM_032917400 CAC86442;Q8VD87;XP_032773291 RNase 1 gamma;pancreatic ribonuclease gamma protein-coding 626032708 LOC116898788 60S ribosomal protein L35a 4 17857690 17861633 + 22301074;30032202 116898788 MODEL JAAIVD010000003;XM_032900130;XM_032900131;XM_032900132 XP_032756021;XP_032756022;XP_032756023 protein-coding 626032723 Myb MYB proto-oncogene, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); calcium ion transport (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 215415707 215448973 + 22301074;30032202 116892969 MODEL JAAIVD010000001;XM_032894923;XM_032894924;XM_032894925 XP_032750814;XP_032750815;XP_032750816 transcriptional activator Myb protein-coding 626032747 LOC116910971 uncharacterized LOC116910971 10 88788678 88790933 + 116910971 MODEL JAAIVD010000005 pseudo 626032748 Otop2 otopetrin 2 ENCODES a protein that exhibits proton channel activity (ortholog); INVOLVED IN proton transmembrane transport (ortholog) 9 68769675 68778927 - 22301074;30032202 116910601 MODEL JAAIVD010000002;XM_032914530 XP_032770421 proton channel OTOP2 protein-coding 626032759 Dnajc5b DnaJ heat shock protein family (Hsp40) member C5 beta 3 134441289 134521990 - 116895572 MODEL JAAIVD010000012;XM_032896805 XP_032752696 dnaJ homolog subfamily C member 5B protein-coding 626032768 LOC116899810 small nucleolar RNA SNORA72 4 147623179 147623307 - 116899810 MODEL JAAIVD010000003;XR_004387811 snorna 626032771 LOC116883214 G/T mismatch-specific thymine DNA glycosylase-like 14 45866226 45868319 + 116883214 MODEL JAAIVD010000009 pseudo 626032772 Zfc3h1 zinc finger C3H1-type containing ASSOCIATED WITH Dwarfism (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN MTREC complex (ortholog); nucleolus (ortholog); nucleus (ortholog) 1 193548965 193603848 + 22301074;30032202 116909045 MODEL JAAIVD010000025;XM_032912529;XM_032912533 XP_032768420;XP_032768424 zinc finger C3H1 domain-containing protein protein-coding 626032816 LOC116897802 60S ribosomal protein L15-like 4 5305157 5305771 + 22301074;30032202 116897802 MODEL JAAIVD010000003;XM_032899219 XP_032755110 protein-coding 626032819 LOC116893311 mas-related G-protein coupled receptor member B8-like 2 152093175 152095456 + 116893311 MODEL JAAIVD010000001 pseudo 626032820 Slc25a47 solute carrier family 25 member 47 ENCODES a protein that exhibits acetyl-CoA transmembrane transporter activity (ortholog); NAD transmembrane transporter activity (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 7 126534863 126540448 + 22301074;30032202 116905909 MODEL JAAIVD010000026;XM_032908898 XP_032764789 protein-coding 626032830 Zbtb7c zinc finger and BTB domain containing 7C INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of fat cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 15 55821380 56146163 - 22301074;30032202 116884519 MODEL JAAIVD010000010;XM_032885653 XP_032741544 zinc finger and BTB domain-containing protein 7C protein-coding 626032839 Lyg1 lysozyme g1 4 114135174 114146909 - 22301074;30032202 116898143 MODEL JAAIVD010000003;XM_032899520 XP_032755411 lysozyme g-like protein 1 protein-coding 626032849 LOC116900385 olfactory receptor 5D14-like 5 69666980 69667930 - 22301074;30032202 116900385 MODEL JAAIVD010000023;XM_032902132 XP_032758023 protein-coding 626032852 Cdh4 cadherin 4 INVOLVED IN axon guidance (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH Microcephaly with Simplified Gyral Pattern (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN plasma membrane (ortholog) 5 156515367 156986829 + 22301074;30032202 116902397 MODEL JAAIVD010000023;XM_032904917 XP_032760808 cadherin-4 protein-coding 626032872 LOC116886870 HORMA domain-containing protein 1-like 18 49584667 49585840 + 116886870 MODEL JAAIVD010000013 pseudo 626032873 LOC116895179 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like 3 146356454 146360799 + 116895179 MODEL JAAIVD010000012 pseudo 626032874 LOC116893088 uncharacterized protein C2orf78 homolog 2 54669542 54670432 - 116893088 MODEL JAAIVD010000001 pseudo 626032875 Selplg selectin P ligand INVOLVED IN cellular response to interleukin-6 (ortholog); leukocyte adhesive activation (ortholog); leukocyte migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); carotid artery disease (ortholog); colitis (ortholog); FOUND IN plasma membrane (ortholog); plasma membrane raft (ortholog); uropod (ortholog) 16 40151319 40153122 + 30032202 116885710 MODEL JAAIVD010000004;XM_032887018 XP_032742909 P-selectin glycoprotein ligand 1 protein-coding 626032882 LOC116895084 small nucleolar RNA SNORD88 2 155283152 155283242 - 116895084 MODEL JAAIVD010000001;XR_004387251 snorna 626032885 LOC116890360 U6 spliceosomal RNA 1 147661470 147661573 - 116890360 MODEL JAAIVD010000025;XR_004386578 snrna 626032888 Slc9a2 solute carrier family 9 member A2 ENCODES a protein that exhibits sodium:proton antiporter activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intracellular protein localization (ortholog); regulation of intracellular pH (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); aortic dissection (ortholog); Edema (ortholog); FOUND IN apical plasma membrane (ortholog) 4 116900210 116983266 + 22301074;30032202 116899328 MODEL JAAIVD010000003;XM_032901019 XP_032756910 sodium/hydrogen exchanger 2 protein-coding 626032904 Dcp1a decapping mRNA 1A ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN mRNA methylguanosine-cap decapping (ortholog); protein localization to cytoplasmic stress granule (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); dendrite (ortholog) 13 6171960 6218315 + 22301074;30032202 116915055 MODEL JAAIVD010000008;XM_032919470;XM_032919471 XP_032775361;XP_032775362 mRNA-decapping enzyme 1A protein-coding 626032921 LOC116909029 histone H3.3A ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of cell growth (ortholog); response to hormone (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Bryant-Li-Bhoj neurodevelopmental syndrome 2 (ortholog); carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 9 68035873 68038132 + 22301074;30032202 116909029 MODEL JAAIVD010000002;XM_032912508 XP_032768399 protein-coding 626032929 LOC116893531 zinc finger protein 58-like 2 199766463 199792037 + 116893531 MODEL JAAIVD010000001 pseudo 626032930 Ube2r2 ubiquitin conjugating enzyme E2 R2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein K48-linked ubiquitination (ortholog); protein monoubiquitination (ortholog) 1 117024554 117038949 - 30032202 116902462 MODEL JAAIVD010000025;XM_032905025 XP_032760916 ubiquitin-conjugating enzyme E2 R2 protein-coding 626032936 Mmp16 matrix metallopeptidase 16 ENCODES a protein that exhibits metalloaminopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN bone development (ortholog); chondrocyte proliferation (ortholog); collagen catabolic process (ortholog); FOUND IN plasma membrane (ortholog) 1 125385082 125626902 - 22301074;30032202;9092507 116903119 MODEL D85509;JAAIVD010000025;XM_032905461 BAA22224;XP_032761352 MT3-MMP matrix metalloproteinase-16 protein-coding 626032950 Mrpl43 mitochondrial ribosomal protein L43 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 44512265 44513662 - 30032202 116891221 MODEL JAAIVD010000001;XM_032892060 XP_032747951 39S ribosomal protein L43, mitochondrial protein-coding 626032958 Prkd2 protein kinase D2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein kinase C binding (ortholog); protein serine kinase activity (ortholog); INVOLVED IN cellular response to vascular endothelial growth factor stimulus (ortholog); intracellular signal transduction (ortholog); positive regulation of angiogenesis (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 172221345 172250017 - 22301074;30032202 116892592 MODEL JAAIVD010000001;XM_032894371 XP_032750262 serine/threonine-protein kinase D2 protein-coding 626032981 LOC116883188 nucleolar complex protein 3 homolog 14 34751985 34754330 + 116883188 MODEL JAAIVD010000009 pseudo 626032982 LOC116908618 reticulocalbin-1-like 1 159330828 159335417 - 116908618 MODEL JAAIVD010000025 pseudo 626032983 Slc8a2 solute carrier family 8 member A2 ENCODES a protein that exhibits calcium ion transmembrane transporter activity (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Reperfusion Injury (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell projection (ortholog) 2 172914973 172948421 - 22301074;30032202 116892607 MODEL JAAIVD010000001;XM_032894407;XM_032894409;XR_004386959 XP_032750298;XP_032750300 sodium/calcium exchanger 2 protein-coding 626033004 Qtrt2 queuine tRNA-ribosyltransferase accessory subunit 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); tRNA binding (ortholog); INVOLVED IN tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 4 28761172 28777796 - 22301074 116898855 MODEL JAAIVD010000003;XM_032900217 XP_032756108 protein-coding 626033016 LOC116884836 60S ribosomal protein L26-like 15 1081039 1081473 - 116884836 MODEL JAAIVD010000010 pseudo 626033017 Sh3d21 SH3 domain containing 21 1 32125558 32140592 + 22301074 116896698 MODEL JAAIVD010000025;XM_032898106;XM_032898115 XP_032753997;XP_032754006 SH3 domain-containing protein 21 protein-coding 626033040 Tinf2 TERF1 interacting nuclear factor 2 ENCODES a protein that exhibits DNA binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of telomere maintenance (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Autosomal Dominant Dyskeratosis Congenita (ortholog); autosomal dominant dyskeratosis congenita 1 (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear body (ortholog); nuclear telomere cap complex (ortholog) 12 69322564 69328795 + 30032202 116913114 MODEL JAAIVD010000007;XM_032917266;XM_032917267;XM_032917268 XP_032773157;XP_032773158;XP_032773159 TERF1-interacting nuclear factor 2 protein-coding 626033063 Gmpr guanosine monophosphate reductase ENCODES a protein that exhibits GMP reductase activity (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog) 14 64495595 64531601 + 22301074 116883658 MODEL JAAIVD010000009;XM_032884853 XP_032740744 GMP reductase 1 protein-coding 626033076 Ide insulin degrading enzyme ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); diabetic encephalopathy (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 36430279 36547215 + 22301074;30032202 116891130 MODEL JAAIVD010000001;XM_032891853 XP_032747744 insulin-degrading enzyme protein-coding 626033105 LOC116889987 60S ribosomal protein L31-like 1 173767700 173768102 - 22301074;30032202 116889987 MODEL JAAIVD010000025;XM_032890778 XP_032746669 protein-coding 626033110 Hyls1 HYLS1 centriolar and ciliogenesis associated ASSOCIATED WITH hydrolethalus syndrome (ortholog); hydrolethalus syndrome 1 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 31099669 31108654 - 30032202 116906790 MODEL JAAIVD010000027;XM_032909651 XP_032765542 hydrolethalus syndrome protein 1 protein-coding 626033118 Wfdc13 WAP four-disulfide core domain 13 5 153271571 153273189 - 116901090 MODEL JAAIVD010000023;XM_032902654 XP_032758545 WAP four-disulfide core domain protein 13 protein-coding 626033122 LOC116897464 U7 small nuclear RNA 3 72473011 72473072 + 116897464 MODEL JAAIVD010000012;XR_004387492 snrna 626033125 Supt4h1 SPT4 homolog, DSIF elongation factor subunit ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); negative regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN DSIF complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 83054403 83060762 - 22301074;30032202 116909669 MODEL JAAIVD010000002;XM_032913324 XP_032769215 transcription elongation factor SPT4 protein-coding 626033134 LOC116901378 low-density lipoprotein receptor-related protein 1B-like 5 18314341 18457155 - 116901378 MODEL JAAIVD010000023;XM_032903246 XP_032759137 protein-coding 626033146 Wdsub1 WD repeat, sterile alpha motif and U-box domain containing 1 ASSOCIATED WITH autistic disorder (ortholog) 5 37556759 37584167 - 22301074 116901436 MODEL JAAIVD010000023;XM_032903344 XP_032759235 WD repeat, SAM and U-box domain-containing protein 1 protein-coding 626033160 Col2a1 collagen type II alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); MHC class II protein binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN anterior head development (ortholog); bone development (ortholog); cartilage condensation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH achondrogenesis type II (ortholog); Animal Disease Models (ortholog); arthritis (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type II trimer (ortholog) 1 270784851 270813920 - 22301074;30032202 116884613 MODEL JAAIVD010000025;XM_032885757 XP_032741648 collagen alpha-1(II) chain protein-coding 626033217 LOC116886733 small nucleolar RNA SNORA17 17 13579974 13580101 + 116886733 MODEL JAAIVD010000011;XR_004386142 snorna 626033220 Lrrc28 leucine rich repeat containing 28 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 2 132700609 132821257 + 22301074 116891982 MODEL JAAIVD010000001;XM_032893428 XP_032749319 leucine-rich repeat-containing protein 28 protein-coding 626033234 Tnfrsf4 TNF receptor superfamily member 4 ENCODES a protein that exhibits tumor necrosis factor receptor activity (ortholog); INVOLVED IN cellular defense response (ortholog); inflammatory response (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); cervical squamous cell carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 1 4637822 4640778 - 22301074;30032202 116891829 MODEL JAAIVD010000025;XM_032893197 XP_032749088 tumor necrosis factor receptor superfamily member 4 protein-coding 626033245 Fgf2 fibroblast growth factor 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine binding (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis involved in coronary vascular morphogenesis (ortholog); behavioral response to ethanol (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN cerium oxide nanoparticle response pathway; fibroblast growth factor signaling pathway; glypican signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Animal Mammary Neoplasms (ortholog); Arteriovenous Fistula (ortholog); FOUND IN extracellular space (ortholog) 3 116628556 116681857 - 22301074;30032202;3387229 116896920 MODEL JAAIVD010000012;X07285;XM_032898486 CAA30265;XP_032754377 protein-coding 626033252 LOC116904553 killer cell lectin-like receptor 4 6 17759760 17778557 + 116904553 MODEL JAAIVD010000024;XM_032907348 XP_032763239 protein-coding 626033262 Rsph10b radial spoke head 10 homolog B FOUND IN cilium (ortholog); sperm flagellum (ortholog) 16 9194340 9243274 - 116885658 MODEL JAAIVD010000004;XM_032886962 XP_032742853 protein-coding 626033286 Adcy3 adenylate cyclase 3 7 24802253 24880338 + 22301074;30032202 116906023 MODEL JAAIVD010000026;XM_032909075;XM_032909076;XM_032909077;XM_032909078 XP_032764966;XP_032764967;XP_032764968;XP_032764969 adenylate cyclase type 3 protein-coding 626033321 LOC116893196 sorting nexin-18-like 2 105246325 105248027 + 116893196 MODEL JAAIVD010000001 pseudo 626033322 LOC116884691 L-lactate dehydrogenase A chain-like 15 13847964 13848847 - 22301074 116884691 MODEL JAAIVD010000010;XM_032885877 XP_032741768 protein-coding 626033327 Pcdh9 protocadherin 9 INVOLVED IN forebrain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell-cell contact zone (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) 12 30706343 31745774 + 22301074 116913100 MODEL JAAIVD010000007;XM_032917237;XM_032917238;XM_032917239;XM_032917241;XM_032917242 XP_032773128;XP_032773129;XP_032773130;XP_032773132;XP_032773133 protocadherin-9 protein-coding 626033348 LOC116912766 uncharacterized LOC116912766 11 92908545 92911267 + 116912766 MODEL JAAIVD010000006;XR_004389478 ncrna 626033352 C14H9orf153 chromosome 14 C9orf153 homolog 14 78433985 78436730 + 116883268 MODEL JAAIVD010000009;XM_032884258 XP_032740149 uncharacterized protein C9orf153 homolog protein-coding 626033357 LOC116903242 acidic proline-rich protein PRP25-like 6 16319244 16322558 - 30032202 116903242 MODEL JAAIVD010000024;XM_032905620 XP_032761511 protein-coding 626033364 Shd Src homology 2 domain containing transforming protein D 4 87363515 87369674 + 30032202 116899160 MODEL JAAIVD010000003;XM_032900720;XM_032900721;XM_032900722 XP_032756611;XP_032756612;XP_032756613 SH2 domain-containing adapter protein D protein-coding 626033381 LOC116895307 uncharacterized LOC116895307 3 22477827 22528698 + 116895307 MODEL JAAIVD010000012;XR_004387270 ncrna 626033386 LOC116903657 platelet glycoprotein 4 6 64714284 64768498 + 30032202 116903657 MODEL JAAIVD010000024;XM_032906313;XM_032906314 XP_032762204;XP_032762205 protein-coding 626033409 LOC116889626 ribosome biogenesis regulatory protein homolog Y 1438850 1440088 - 116889626 MODEL JAAIVD010000015 pseudo 626033410 LOC116887865 melanoma-associated antigen B4-like X 45222152 45223174 - 30032202 116887865 MODEL JAAIVD010000014;XM_032889361 XP_032745252 protein-coding 626033413 LOC116906002 60S ribosomal protein L37-like 7 23274633 23277018 - 22301074;30032202 116906002 MODEL JAAIVD010000026;XM_032909040 XP_032764931 protein-coding 626033418 Odad1 outer dynein arm docking complex subunit 1 INVOLVED IN cilium movement (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bronchiectasis (ortholog); Ciliary Motility Disorders (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); outer dynein arm (ortholog) 2 153571738 153596625 - 30032202 116892115 MODEL JAAIVD010000001;XM_032893593;XM_032893594 XP_032749484;XP_032749485 Ccdc114 coiled-coil domain containing 114;coiled-coil domain-containing protein 114 protein-coding 626033439 LOC116892749 zinc finger protein 160-like 2 181227403 181235144 + 30032202 116892749 MODEL JAAIVD010000001;XM_032894627 XP_032750518 protein-coding 626033446 Nr2f6 nuclear receptor subfamily 2 group F member 6 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); entrainment of circadian clock by photoperiod (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); endometriosis (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 13 13620161 13627561 + 22301074;30032202 116915099 MODEL JAAIVD010000008;XM_032919526 XP_032775417 protein-coding 626033455 LOC116905685 NTF2-related export protein 2-like 7 45789250 45790033 - 116905685 MODEL JAAIVD010000026 pseudo 626033456 LOC116889235 60S ribosomal protein L31-like 1 124786781 124787208 + 22301074;30032202 116889235 MODEL JAAIVD010000025;XM_032890389 XP_032746280 protein-coding 626033460 LOC116906981 vomeronasal type-2 receptor 116-like 8 34325608 34360732 + 22301074;30032202 116906981 MODEL JAAIVD010000027;XM_032909902 XP_032765793 protein-coding 626033468 Prkar1b protein kinase cAMP-dependent type I regulatory subunit beta ENCODES a protein that exhibits cAMP binding (ortholog); cAMP-dependent protein kinase inhibitor activity (ortholog); cAMP-dependent protein kinase regulator activity (ortholog); INVOLVED IN learning or memory (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH hypertension (ortholog); MARBACH-SCHAAF NEURODEVELOPMENTAL SYNDROME (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 16 14066291 14184001 + 22301074 116885245 MODEL JAAIVD010000004;XM_032886483;XM_032886484 XP_032742374;XP_032742375 cAMP-dependent protein kinase type I-beta regulatory subunit protein-coding 626033486 Tspan31 tetraspanin 31 ASSOCIATED WITH familial melanoma (ortholog); Hereditary Neoplastic Syndromes (ortholog) 1 205496079 205498970 - 22301074;30032202 116909819 MODEL JAAIVD010000025;XM_032913536 XP_032769427 tetraspanin-31 protein-coding 626033496 Mab21l4 mab-21 like 4 4 165083750 165093682 - 116899656 MODEL JAAIVD010000003;XM_032901666;XM_032901667 XP_032757557;XP_032757558 protein mab-21-like 4 protein-coding 626033508 Ntrk3 neurotrophic receptor tyrosine kinase 3 ENCODES a protein that exhibits GPI-linked ephrin receptor activity (ortholog); neurotrophin receptor activity (ortholog); p53 binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to retinoic acid (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 2 121789479 122159303 + 22301074;30032202 116891958 MODEL JAAIVD010000001;XM_032893399;XM_032893400;XM_032893401;XM_032893402 XP_032749290;XP_032749291;XP_032749292;XP_032749293 NT-3 growth factor receptor protein-coding 626033537 Atp13a3 ATPase 13A3 ENCODES a protein that exhibits P-type transmembrane transporter activity (ortholog); ASSOCIATED WITH primary pulmonary hypertension 5 (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN early endosome membrane (ortholog); late endosome membrane (ortholog); recycling endosome membrane (ortholog) 4 15226947 15279152 - 22301074;30032202 116898746 MODEL JAAIVD010000003;XM_032900061;XM_032900063;XM_032900064 XP_032755952;XP_032755954;XP_032755955 probable cation-transporting ATPase 13A3 protein-coding 626033575 Fkbp7 FKBP prolyl isomerase 7 ENCODES a protein that exhibits calcium ion binding (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 54012288 54024446 - 22301074 116901548 MODEL JAAIVD010000023;XM_032903532;XM_032903533;XM_032903534;XR_004388005 XP_032759423;XP_032759424;XP_032759425 peptidyl-prolyl cis-trans isomerase FKBP7 protein-coding 626033593 Tmed2 transmembrane p24 trafficking protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); smoothened binding (ortholog); INVOLVED IN allantois development (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); chorion development (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 16 29322546 29331540 - 30032202 116885385 MODEL JAAIVD010000004;XM_032886665 XP_032742556 transmembrane emp24 domain-containing protein 2 protein-coding 626033601 LOC116883198 keratin, type I cytoskeletal 18-like 14 39824469 39826704 - 116883198 MODEL JAAIVD010000009 pseudo 626033602 LOC116900944 uncharacterized LOC116900944 5 89314405 89491146 - 22301074 116900944 MODEL JAAIVD010000023;XM_032902585 XP_032758476 uncharacterized protein LOC116900944 protein-coding 626033676 LOC116887833 60S acidic ribosomal protein P0-like X 37251546 37252141 - 116887833 MODEL JAAIVD010000014 pseudo 626033677 LOC116888028 high mobility group protein B4-like X 82609235 82610790 + 116888028 MODEL JAAIVD010000014 pseudo 626033678 LOC116893961 olfactory receptor 2AT4 ENCODES a protein that exhibits olfactory receptor activity (ortholog); INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN plasma membrane (ortholog) 2 98000655 98001986 + 22301074 116893961 MODEL JAAIVD010000001;XM_032895678 XP_032751569 protein-coding 626033683 LOC116911884 U6 spliceosomal RNA 10 6849917 6850023 + 116911884 MODEL JAAIVD010000005;XR_004389398 snrna 626033686 LOC116904471 transcription termination factor 1, mitochondrial-like 6 136502075 136503272 + 116904471 MODEL JAAIVD010000024 pseudo 626033687 Wbp11 WW domain binding protein 11 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); WW domain binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH genetic disease (ortholog); VERTEBRAL, CARDIAC, TRACHEOESOPHAGEAL, RENAL, AND LIMB DEFECTS (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 6 12637481 12651662 + 30032202 116903149 MODEL JAAIVD010000024;XM_032905515;XM_032905516 XP_032761406;XP_032761407 WW domain-binding protein 11 protein-coding 626033708 LOC116900680 cystatin-S-like 5 128822182 128827519 - 22301074;30032202 116900680 MODEL JAAIVD010000023;XM_032902384 XP_032758275 protein-coding 626033715 Baz2a bromodomain adjacent to zinc finger domain 2A ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA methylation-dependent constitutive heterochromatin formation (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN chromatin silencing complex (ortholog); cytosol (ortholog); NoRC complex (ortholog) 1 155577561 155609253 + 22301074;30032202 116905888 MODEL JAAIVD010000025;XM_032908878 XP_032764769 bromodomain adjacent to zinc finger domain protein 2A protein-coding 626033747 Dbndd1 dysbindin domain containing 1 17 43098784 43107731 - 22301074;30032202 116886425 MODEL JAAIVD010000011;XM_032887911 XP_032743802 dysbindin domain-containing protein 1 protein-coding 626033755 Ccdc97 coiled-coil domain containing 97 2 169076636 169084405 + 116892449 MODEL JAAIVD010000001;XM_032894153 XP_032750044 coiled-coil domain-containing protein 97 protein-coding 626033764 LOC116911968 WW domain-binding protein 11-like 11 30701363 30703202 + 116911968 MODEL JAAIVD010000006 pseudo 626033765 Epn1 epsin 1 ENCODES a protein that exhibits clathrin adaptor activity (ortholog); molecular sequestering activity (ortholog); transcription factor binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); embryonic organ development (ortholog); endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); postsynapse (ortholog) 2 177658743 177676781 + 30032202 116892683 MODEL JAAIVD010000001;XM_032894524;XM_032894525;XM_032894526;XM_032894527;XM_032894528;XM_032894530;XM_032894531 XP_032750415;XP_032750416;XP_032750417;XP_032750418;XP_032750419;XP_032750421;XP_032750422 epsin-1 protein-coding 626033790 LOC116895727 melanoma antigen preferentially expressed in tumors-like 3 223258268 223261652 + 30032202 116895727 MODEL JAAIVD010000012;XM_032896907 XP_032752798 protein-coding 626033796 Rgs2 regulator of G protein signaling 2 ENCODES a protein that exhibits adenylate cyclase inhibitor activity (ortholog); beta-tubulin binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); maternal process involved in female pregnancy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); bladder disease (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 10 23937233 23940739 - 116911334 MODEL JAAIVD010000005;XM_032915251 XP_032771142 regulator of G-protein signaling 2 protein-coding 626033805 Pcbp3 poly(rC) binding protein 3 ENCODES a protein that exhibits C-rich single-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN iron homeostasis pathway 18 91519 290750 - 30032202 116886915 MODEL JAAIVD010000013;XM_032888387;XM_032888388;XM_032888389;XM_032888390;XM_032888391;XM_032888392;XM_032888393;XM_032888394;XM_032888395 XP_032744278;XP_032744279;XP_032744280;XP_032744281;XP_032744282;XP_032744283;XP_032744284;XP_032744285;XP_032744286 poly(rC)-binding protein 3 protein-coding 626033836 LOC116894889 U6 spliceosomal RNA 2 167863406 167863508 - 116894889 MODEL JAAIVD010000001;XR_004387096 snrna 626033839 Slc9b2 solute carrier family 9 member B2 ENCODES a protein that exhibits identical protein binding (ortholog); lithium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); flagellated sperm motility (ortholog); lithium ion transport (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endosome membrane (ortholog) 3 23751523 23786214 - 22301074 116895237 MODEL JAAIVD010000012;XM_032896561 XP_032752452 sodium/hydrogen exchanger 9B2 protein-coding 626033855 Thbs3 thrombospondin 3 ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN bone trabecula formation (ortholog); growth plate cartilage development (ortholog); ossification involved in bone maturation (ortholog); ASSOCIATED WITH genetic disease (ortholog); prostate cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 3 64450184 64461914 - 22301074 116896658 MODEL JAAIVD010000012;XM_032897994 XP_032753885 thrombospondin-3 protein-coding 626033882 Mybph myosin binding protein H ASSOCIATED WITH hypertension (ortholog) 10 1485231 1492706 - 22301074 116911542 MODEL JAAIVD010000005;XM_032915531 XP_032771422 myosin-binding protein H protein-coding 626033895 LOC116900932 60S ribosomal protein L19-like 5 80273855 80279742 + 22301074;30032202 116900932 MODEL JAAIVD010000023;XM_032902580 XP_032758471 protein-coding 626033899 LOC116907061 elongation factor 1-gamma-like 8 26171361 26172650 - 116907061 MODEL JAAIVD010000027 pseudo 626033900 LOC116898194 multifunctional protein ADE2-like 4 135547370 135548550 - 116898194 MODEL JAAIVD010000003 pseudo 626033901 LOC116893822 apolipoprotein C-I-like 2 54386843 54387242 - 22301074;30032202 116893822 MODEL JAAIVD010000001;XM_032895536 XP_032751427 protein-coding 626033906 LOC116908732 keratin-associated protein 16-1 9 54723744 54725225 - 22301074;30032202 116908732 MODEL JAAIVD010000002;XM_032912076 XP_032767967 protein-coding 626033909 Rnf34 ring finger protein 34 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidylinositol phosphate binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to cold (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); nuclear body (ortholog) 16 30962381 30982783 - 30032202 116885529 MODEL JAAIVD010000004;XM_032886825;XM_032886826 XP_032742716;XP_032742717 E3 ubiquitin-protein ligase RNF34 protein-coding 626033924 Tex48 testis expressed 48 1 89975672 89982716 + 116888381 MODEL JAAIVD010000025;XM_032889659 XP_032745550 testis-expressed protein 48 protein-coding 626033932 LOC116914864 sorcin-like 13 50747463 50748052 - 116914864 MODEL JAAIVD010000008 pseudo 626033933 LOC116913683 olfactory receptor 11G2-like 12 72828515 72833920 - 22301074 116913683 MODEL JAAIVD010000007;XM_032917971 XP_032773862 protein-coding 626033938 LOC116911476 pyrin and HIN domain-containing protein 1-like 10 52523439 52537620 - 30032202 116911476 MODEL JAAIVD010000005;XM_032915459 XP_032771350 protein-coding 626033946 Tmem212 transmembrane protein 212 3 126770204 126787353 + 116895933 MODEL JAAIVD010000012;XM_032897003 XP_032752894 protein-coding 626033953 LOC116905419 uncharacterized LOC116905419 7 120700098 120712033 + 116905419 MODEL JAAIVD010000026;XR_004388526 ncrna 626033958 LOC116909409 hemoglobin subunit theta-1-like 9 3580534 3581148 - 116909409 MODEL JAAIVD010000002 pseudo 626033959 LOC116893876 uncharacterized LOC116893876 2 68256936 68270656 - 116893876 MODEL JAAIVD010000001;XR_004387008 ncrna 626033963 Sec11c SEC11 homolog C, signal peptidase complex subunit ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN signal peptide processing (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 15 65455753 65472285 - 22301074;30032202 116884543 MODEL JAAIVD010000010;XM_032885680 XP_032741571 signal peptidase complex catalytic subunit SEC11C protein-coding 626033973 Mblac1 metallo-beta-lactamase domain containing 1 ENCODES a protein that exhibits metal ion binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN histone mRNA metabolic process (ortholog); mRNA 3'-end processing (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 15566072 15567350 + 116885755 MODEL JAAIVD010000004;XM_032887071 XP_032742962 metallo-beta-lactamase domain-containing protein 1 protein-coding 626033978 LOC116913030 U2 spliceosomal RNA 11 8762353 8762501 + 116913030 MODEL JAAIVD010000006 pseudo 626033979 Nckap1l NCK associated protein 1 like ENCODES a protein that exhibits GTPase activator activity (ortholog); protein kinase activator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin polymerization-dependent cell motility (ortholog); B cell homeostasis (ortholog); B cell receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); immunodeficiency 72 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); SCAR complex (ortholog) 1 259589796 259641779 - 30032202 116883186 MODEL JAAIVD010000025;XM_032884225 XP_032740116 nck-associated protein 1-like protein-coding 626034014 LOC116903920 uncharacterized protein C8orf34 homolog 1 146211134 146329920 + 116903920 MODEL JAAIVD010000025;XM_032906695 XP_032762586 protein-coding 626034022 LOC116890470 small nucleolar RNA SNORA24 1 259313226 259313347 - 116890470 MODEL JAAIVD010000025 pseudo 626034023 Shcbp1 SHC binding and spindle associated 1 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); regulation of neural precursor cell proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); synovial sarcoma (ortholog) 13 78722096 78752505 + 30032202 116914814 MODEL JAAIVD010000008;XM_032919270 XP_032775161 SHC SH2 domain-binding protein 1 protein-coding 626034040 Ina internexin neuronal intermediate filament protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic intermediate filament cytoskeleton (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); intermediate filament cytoskeleton organization (ortholog); neurofilament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); High Myopia (ortholog); Lupus Vasculitis, Central Nervous System (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); glutamatergic synapse (ortholog); neurofilament (ortholog) 2 46538124 46549677 + 22301074;30032202 116891259 MODEL JAAIVD010000001;XM_032892145 XP_032748036 alpha-internexin protein-coding 626034047 Bbs4 Bardet-Biedl syndrome 4 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); dynactin binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult behavior (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 4 (ortholog); FOUND IN BBSome (ortholog); centriolar satellite (ortholog); centriole (ortholog) 8 53177698 53211259 - 22301074;30032202 116907356 MODEL JAAIVD010000027;XM_032910291;XM_032910292 XP_032766182;XP_032766183 Bardet-Biedl syndrome 4 protein protein-coding 626034071 LOC116896934 zinc finger protein 345-like 3 117804466 117823654 - 22301074 116896934 MODEL JAAIVD010000012;XM_032898501 XP_032754392 protein-coding 626034079 Enthd1 ENTH domain containing 1 1 250213695 250329543 - 30032202 116890150 MODEL JAAIVD010000025;XM_032890885 XP_032746776 ENTH domain-containing protein 1 protein-coding 626034090 LOC116889968 olfactory receptor 6C2-like 1 162088036 162088982 - 116889968 MODEL JAAIVD010000025 pseudo 626034091 LOC116895230 peptidyl-prolyl cis-trans isomerase A-like 3 20552070 20563573 + 116895230 MODEL JAAIVD010000012 pseudo 626034092 LOC116893221 olfactory receptor 14C36-like 2 114785399 114788445 + 22301074;30032202 116893221 MODEL JAAIVD010000001;XM_032895103 XP_032750994 protein-coding 626034096 Lrrc73 leucine rich repeat containing 73 4 83612367 83615493 - 22301074 116899116 MODEL JAAIVD010000003;XM_032900636;XM_032900637;XM_032900638 XP_032756527;XP_032756528;XP_032756529 leucine-rich repeat-containing protein 73 protein-coding 626034111 LOC116898431 transaldolase-like 4 91886637 91887642 + 116898431 MODEL JAAIVD010000003 pseudo 626034112 LOC116911694 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4E 10 1163894 1170544 + 30032202 116911694 MODEL JAAIVD010000005;XM_032915650 XP_032771541 protein-coding 626034118 LOC116883778 uncharacterized LOC116883778 14 71046859 71048914 - 116883778 MODEL JAAIVD010000009;XR_004385786 ncrna 626034122 Crygn crystallin gamma N 6 153964031 153971335 - 30032202 116903018 MODEL JAAIVD010000024;XM_032905331 XP_032761222 gamma-crystallin N protein-coding 626034129 Tnfrsf1a TNF receptor superfamily member 1A ENCODES a protein that exhibits protease binding (ortholog); protein-containing complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN aortic valve development (ortholog); apoptotic signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acne (ortholog); acquired immunodeficiency syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); extracellular space (ortholog) 6 22540807 22553712 - 22301074;30032202 116903249 MODEL JAAIVD010000024;XM_032905628 XP_032761519 tumor necrosis factor receptor superfamily member 1A protein-coding 626034143 LOC116914010 myosin-6 12 70023793 70048778 + 22301074 116914010 MODEL JAAIVD010000007;XM_032918281;XM_032918282 XP_032774172;XP_032774173 protein-coding 626034188 LOC116888319 homeobox protein ceh-36-like X 103588832 103593407 - 30032202 116888319 MODEL JAAIVD010000014;XM_032889592 XP_032745483 protein-coding 626034193 LOC116914605 60S ribosomal protein L13a-like 13 8198052 8198689 - 116914605 MODEL JAAIVD010000008 pseudo 626034194 Etnk2 ethanolamine kinase 2 ENCODES a protein that exhibits choline kinase activity (ortholog); ethanolamine kinase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); multicellular organism growth (ortholog); phosphatidylethanolamine biosynthetic process (ortholog) 10 2462957 2481487 - 30032202 116911557 MODEL JAAIVD010000005;XM_032915548 XP_032771439 protein-coding 626034206 LOC116889405 SNRPN upstream reading frame protein-like X 64685728 64685935 + 116889405 MODEL JAAIVD010000014 pseudo 626034207 Nvl nuclear VCP like ENCODES a protein that exhibits ATP binding (ortholog); preribosome binding (ortholog); INVOLVED IN positive regulation of telomere maintenance (ortholog); regulation of protein localization to nucleolus (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN nuclear exosome (RNase complex) (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 10 59454114 59505430 - 22301074;30032202 116911072 MODEL JAAIVD010000005;XM_032914844;XM_032914845;XM_032914846;XM_032914847;XM_032914848;XM_032914850;XM_032914851;XM_032914852 XP_032770735;XP_032770736;XP_032770737;XP_032770738;XP_032770739;XP_032770741;XP_032770742;XP_032770743 nuclear valosin-containing protein-like protein-coding 626034253 Abcc4 ATP binding cassette subfamily C member 4 (PEL blood group) ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cAMP transport (ortholog); cilium assembly (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; lamivudine pharmacokinetics pathway; mercaptopurine pharmacodynamics pathway; ASSOCIATED WITH cholestasis (ortholog); cognitive disorder (ortholog); Colorectal Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) 12 7216829 7449634 + 22301074;30032202 116913492 MODEL JAAIVD010000007;XM_032917695 XP_032773586 multidrug resistance-associated protein 4 protein-coding 626034288 LOC116895163 60S ribosomal protein L18a-like 3 57112826 57113326 - 116895163 MODEL JAAIVD010000012 pseudo 626034289 LOC116906906 cytochrome P450 4F1 1 157419682 157431240 - 22301074 116906906 MODEL JAAIVD010000025;XM_032909826 XP_032765717 protein-coding 626034306 Gtf3a general transcription factor IIIA ENCODES a protein that exhibits 5S rRNA binding (ortholog); DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN nucleoplasm (ortholog) 16 6923909 6931168 - 30032202 116885343 MODEL JAAIVD010000004;XM_032886617 XP_032742508 transcription factor IIIA protein-coding 626034319 Basp1 brain abundant membrane attached signal protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); protein domain specific binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); podocyte differentiation (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); COP9 signalosome (ortholog) 3 155430565 155479357 + 30032202 116897072 MODEL JAAIVD010000012;XM_032898698 XP_032754589 brain acid soluble protein 1 protein-coding 626034325 Hdac7 histone deacetylase 7 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN cell-cell junction assembly (ortholog); cellular response to mechanical stimulus (ortholog); membraneless organelle assembly (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; ASSOCIATED WITH alopecia areata (ortholog); colorectal cancer (ortholog); Huntington's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 270608152 270646495 - 22301074;30032202 116884555 MODEL JAAIVD010000025;XM_032885697;XM_032885704;XM_032885711;XM_032885717 XP_032741588;XP_032741595;XP_032741602;XP_032741608 protein-coding 626034363 LOC116891975 uncharacterized LOC116891975 2 129939780 129948562 - 116891975 MODEL JAAIVD010000001;XR_004386886 ncrna 626034368 Cd248 CD248 molecule ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN anatomical structure regression (ortholog); fibroblast migration (ortholog); lymph node development (ortholog); FOUND IN cytoplasm (ortholog) 2 2582474 2585022 - 22301074;30032202 116890741 MODEL JAAIVD010000001;XM_032891198 XP_032747089 endosialin protein-coding 626034373 Dcdc2b doublecortin domain containing 2B 1 28535745 28541261 + 22301074;30032202 116896088 MODEL JAAIVD010000025;XM_032897066 XP_032752957 doublecortin domain-containing protein 2B protein-coding 626034385 Tusc1 tumor suppressor candidate 1 1 60085715 60087279 + 116900225 MODEL JAAIVD010000025;XM_032901980 XP_032757871 tumor suppressor candidate gene 1 protein protein-coding 626034390 Stard3 StAR related lipid transfer domain containing 3 ENCODES a protein that exhibits cholesterol binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cholesterol transport (ortholog); progesterone biosynthetic process (ortholog); vesicle tethering to endoplasmic reticulum (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-endosome membrane contact site (ortholog); endosome (ortholog) 9 56012418 56035051 - 22301074 116909164 MODEL JAAIVD010000002;XM_032912653;XM_032912654 XP_032768544;XP_032768545 stAR-related lipid transfer protein 3 protein-coding 626034412 LOC116906211 Ig heavy chain V region 5-84-like 7 121278590 121283790 + 116906211 MODEL JAAIVD010000026 pseudo 626034413 LOC116884915 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 15 8430314 8430998 + 116884915 MODEL JAAIVD010000010 pseudo 626034414 Rogdi rogdi atypical leucine zipper INVOLVED IN amelogenesis (ortholog); bone mineralization (ortholog); brain development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); nuclear envelope (ortholog); presynapse (ortholog) 9 16894943 16899728 + 30032202 116909081 MODEL JAAIVD010000002;XM_032912556 XP_032768447 protein rogdi homolog protein-coding 626034429 LOC116895405 glyceraldehyde-3-phosphate dehydrogenase-like 3 60939889 60940891 - 116895405 MODEL JAAIVD010000012 pseudo 626034430 LOC116902366 seminal vesicle secretory protein 2 5 153741581 153744627 + 30032202 116902366 MODEL JAAIVD010000023;XM_032904861 XP_032760752 protein-coding 626034437 Aspa aspartoacylase ENCODES a protein that exhibits aspartoacylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetate metabolic process (ortholog); aspartate metabolic process (ortholog); central nervous system myelination (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Canavan disease (ortholog); Experimental Diabetes Mellitus (ortholog); Tremor (ortholog); FOUND IN cytosol (ortholog) 9 42190721 42212416 + 22301074 116909569 MODEL JAAIVD010000002;XM_032913188;XM_032913189 XP_032769079;XP_032769080 protein-coding 626034452 LOC116911245 ubiquitin-like 10 61235696 61236098 + 116911245 MODEL JAAIVD010000005 pseudo 626034453 Stac3 SH3 and cysteine rich domain 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neuromuscular synaptic transmission (ortholog); positive regulation of protein localization to plasma membrane (ortholog); positive regulation of voltage-gated calcium channel activity (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 205951409 205959069 + 22301074;30032202 116910148 MODEL JAAIVD010000025;XM_032914001;XM_032914009 XP_032769892;XP_032769900 SH3 and cysteine-rich domain-containing protein 3 protein-coding 626034472 LOC116894841 U6 spliceosomal RNA 2 88168789 88168895 - 116894841 MODEL JAAIVD010000001;XR_004387056 snrna 626034475 Piwil4 piwi like RNA-mediated gene silencing 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); piRNA binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN epithelial structure maintenance (ortholog); piRNA processing (ortholog); piRNA-mediated gene silencing by mRNA destabilization (ortholog); ASSOCIATED WITH oligospermia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 8 10489211 10528587 - 22301074;30032202 116907932 MODEL JAAIVD010000027;XM_032911146;XM_032911147;XM_032911148 XP_032767037;XP_032767038;XP_032767039 piwi-like protein 4 protein-coding 626034503 LOC116911596 corepressor interacting with RBPJ 1-like 10 21145046 21304111 - 116911596 MODEL JAAIVD010000005 pseudo 626034504 Rhcg Rh family C glycoprotein ENCODES a protein that exhibits ammonium channel activity (ortholog); ankyrin binding (ortholog); carbon dioxide transmembrane transporter activity (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); intracellular monoatomic ion homeostasis (ortholog); regulation of pH (ortholog); ASSOCIATED WITH Hypoaldosteronism (ortholog); hypokalemia (ortholog); kidney failure (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 120633133 120657173 + 22301074;30032202 116894275 MODEL JAAIVD010000001;XM_032895987 XP_032751878 ammonium transporter Rh type C protein-coding 626034519 LOC116915081 beta-defensin 40-like 13 65217855 65221119 + 22301074;30032202 116915081 MODEL JAAIVD010000008;XM_032919505 XP_032775396 protein-coding 626034523 Map1a microtubule associated protein 1A ENCODES a protein that exhibits actin binding (ortholog); collagen binding (ortholog); cytoskeletal anchor activity (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); associative learning (ortholog); memory (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypothyroidism (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cytoplasm (ortholog) 5 99442471 99462117 + 30032202 116901853 MODEL JAAIVD010000023;XM_032904046;XM_032904047 XP_032759937;XP_032759938 microtubule-associated protein 1A protein-coding 626034537 LOC116894104 olfactory receptor 52H1-like 2 103539601 103540584 + 22301074 116894104 MODEL JAAIVD010000001;XM_032895823 XP_032751714 protein-coding 626034540 LOC116894865 U6 spliceosomal RNA 2 203429395 203429500 - 116894865 MODEL JAAIVD010000001;XR_004387078 snrna 626034543 Hs6st2 heparan sulfate 6-O-sulfotransferase 2 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Paganini-Miozzo syndrome (ortholog); FOUND IN Golgi apparatus (ortholog) X 115071952 115075185 - 30032202 116888594 MODEL JAAIVD010000014;XM_032889893 XP_032745784 heparan-sulfate 6-O-sulfotransferase 2 protein-coding 626034549 LOC116904451 proteasome subunit alpha type-6-like 6 128007615 128008411 - 116904451 MODEL JAAIVD010000024 pseudo 626034550 LOC116890363 U6 spliceosomal RNA 1 162561731 162561834 + 116890363 MODEL JAAIVD010000025;XR_004386581 snrna 626034553 Pafah1b3 platelet activating factor acetylhydrolase 1b catalytic subunit 3 ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); identical protein binding (ortholog); platelet-activating factor acetyltransferase activity (ortholog); INVOLVED IN spermatogenesis (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN 1-alkyl-2-acetylglycerophosphocholine esterase complex (ortholog); cytoplasm (ortholog) 2 169417425 169420011 + 116892463 MODEL JAAIVD010000001;XM_032894179;XM_032894180 XP_032750070;XP_032750071 platelet-activating factor acetylhydrolase IB subunit gamma protein-coding 626034566 Ccdc6 coiled-coil domain containing 6 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN cytosol (ortholog) 18 16682022 16775710 - 116887002 MODEL JAAIVD010000013;XM_032888484 XP_032744375 coiled-coil domain-containing protein 6 protein-coding 626034579 LOC116897416 U6 spliceosomal RNA 3 223037246 223037349 - 116897416 MODEL JAAIVD010000012;XR_004387458 snrna 626034582 LOC116907144 thymosin beta-10-like 8 53627581 53627765 - 116907144 MODEL JAAIVD010000027 pseudo 626034583 LOC116889096 ribosome biogenesis protein NSA2 homolog X 96713674 96714493 + 116889096 MODEL JAAIVD010000014 pseudo 626034584 LOC116908040 C-C chemokine receptor type 5 8 115190171 115195399 + 22301074;30032202 116908040 MODEL FJ573194;FJ573195;JAAIVD010000027;XM_032911314 ACL97977;ACL97978;XP_032767205 CCR5 protein-coding 626034590 LOC116898367 cytochrome c oxidase subunit 7C, mitochondrial-like 4 61490329 61490540 + 116898367 MODEL JAAIVD010000003 pseudo 626034591 Jrkl JRK like 8 9215685 9219188 - 22301074;30032202 116907382 MODEL JAAIVD010000027;XM_032910336 XP_032766227 jerky protein homolog-like protein-coding 626034596 LOC116885503 leucine-rich repeat and WD repeat-containing protein 1-like 16 17874878 17877700 + 22301074;30032202 116885503 MODEL JAAIVD010000004;XM_032886795 XP_032742686 protein-coding 626034603 Rpa1 replication protein A1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Chloracne (ortholog); Pulmonary Fibrosis and/or Bone Marrow Failure Syndrome, Telomere-Related, 6 (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); DNA replication factor A complex (ortholog) 9 94021085 94070698 - 22301074;30032202 116909402 MODEL JAAIVD010000002;XM_032912967 XP_032768858 replication protein A 70 kDa DNA-binding subunit protein-coding 626034624 LOC116888027 protein diaphanous homolog 2-like X 82353078 82531193 - 116888027 MODEL JAAIVD010000014;XM_032889436 XP_032745327 protein-coding 626034631 Tmed8 transmembrane p24 trafficking protein family member 8 7 101264061 101294408 - 116905320 MODEL JAAIVD010000026;XM_032908211;XM_032908212 XP_032764102;XP_032764103 protein TMED8 protein-coding 626034644 LOC116915175 U6 spliceosomal RNA 13 18996842 18996948 + 116915175 MODEL JAAIVD010000008;XR_004389835 snrna 626034647 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41983290 41983360 - 116884171 MODEL JAAIVD010000009 trna 626034648 Cct3 chaperonin containing TCP1 subunit 3 ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein localization to Cajal body (ortholog); positive regulation of telomerase RNA localization to Cajal body (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); human immunodeficiency virus infectious disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH SPEECH OR VISUAL IMPAIRMENT AND BRAIN HYPOMYELINATION (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); microtubule (ortholog) 3 65230810 65254848 - 22301074;30032202 116896694 MODEL JAAIVD010000012;XM_032898093 XP_032753984 T-complex protein 1 subunit gamma protein-coding 626034666 LOC116890216 uncharacterized LOC116890216 1 261845311 261851081 + 116890216 MODEL JAAIVD010000025;XR_004386530 ncrna 626034671 LOC116902947 vomeronasal type-1 receptor 96 6 124029626 124030609 + 22301074;30032202 116902947 MODEL JAAIVD010000024;XM_032905272 XP_032761163 protein-coding 626034675 Cnrip1 cannabinoid receptor interacting protein 1 ENCODES a protein that exhibits type 1 cannabinoid receptor binding (ortholog); INVOLVED IN negative regulation of signaling receptor activity (ortholog); regulation of signaling receptor activity (ortholog); regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission (ortholog); FOUND IN cytoplasm (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 11 85541719 85564603 + 30032202 116912386 MODEL JAAIVD010000006;XM_032916444 XP_032772335 CB1 cannabinoid receptor-interacting protein 1 protein-coding 626034682 Copa coat protein complex I subunit alpha ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN pancreatic juice secretion (ortholog); protein localization to axon (ortholog); protein localization to cell leading edge (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH arthritis (ortholog); autoimmune disease (ortholog); autoimmune interstitial lung, joint, and kidney disease (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) 10 51199086 51239951 + 22301074;30032202 116911712 MODEL JAAIVD010000005;XM_032915682 XP_032771573 COPI coat complex subunit alpha;coatomer subunit alpha protein-coding 626034719 LOC116903185 killer cell lectin-like receptor 5 6 17185136 17207467 - 116903185 MODEL JAAIVD010000024;XM_032905557;XM_032905558 XP_032761448;XP_032761449 protein-coding 626034734 LOC116906603 sodium channel modifier 1-like 8 10524044 10524667 + 116906603 MODEL JAAIVD010000027 pseudo 626034735 LOC116887697 60S ribosomal protein L21-like 1 54916458 54916906 - 22301074;30032202 116887697 MODEL JAAIVD010000025;XM_032889296 XP_032745187 protein-coding 626034739 Ercc2 ERCC excision repair 2, TFIIH core complex helicase subunit ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); bone mineralization (ortholog); central nervous system myelin formation (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acquired immunodeficiency syndrome (ortholog); acute leukemia (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 171225165 171238607 - 22301074;30032202 116892532 MODEL JAAIVD010000001;XM_032894292;XR_004386956 XP_032750183 general transcription and DNA repair factor IIH helicase subunit XPD protein-coding 626034770 Nat9 N-acetyltransferase 9 FOUND IN protein-containing complex (ortholog) 9 68914851 68919890 + 30032202 116909917 MODEL JAAIVD010000002;XM_032913678;XM_032913680 XP_032769569;XP_032769571 N-acetyltransferase 9 (putative) protein-coding 626034785 Rnf19b ring finger protein 19B ENCODES a protein that exhibits ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN natural killer cell mediated cytotoxicity (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytolytic granule (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 29054773 29078427 - 22301074;30032202 116896304 MODEL JAAIVD010000025;XM_032897395 XP_032753286 E3 ubiquitin-protein ligase RNF19B protein-coding 626034798 Esrrb estrogen related receptor beta ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); cell population proliferation (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 35 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN condensed chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 100515640 100610913 + 22301074 116905820 MODEL JAAIVD010000026;XM_032908787 XP_032764678 steroid hormone receptor ERR2 protein-coding 626034809 Rabgef1 RAB guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN dendritic transport (ortholog); endosomal transport (ortholog); establishment of localization in cell (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); early endosome membrane (ortholog) 16 23766559 23810409 - 22301074;30032202 116885404 MODEL JAAIVD010000004;XM_032886687;XM_032886688;XM_032886689;XM_032886690 XP_032742578;XP_032742579;XP_032742580;XP_032742581 rab5 GDP/GTP exchange factor protein-coding 626034835 Robo2 roundabout guidance receptor 2 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in luteolysis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); bicuspid aortic valve disease (ortholog); Brain Injuries (ortholog); FOUND IN axolemma (ortholog); cell surface (ortholog); glutamatergic synapse (ortholog) 4 67969000 68084439 + 22301074 116897710 MODEL JAAIVD010000003;XM_032899163;XM_032899164;XM_032899165;XM_032899166;XM_032899167;XM_032899168;XM_032899169 XP_032755054;XP_032755055;XP_032755056;XP_032755057;XP_032755058;XP_032755059;XP_032755060 roundabout homolog 2 protein-coding 626034879 LOC116894969 small nucleolar RNA SNORA5 2 165957289 165957411 + 116894969 MODEL JAAIVD010000001;XR_004387161 snorna 626034882 Prx periaxin INVOLVED IN axon ensheathment (ortholog); nerve development (ortholog); peripheral nervous system myelin formation (ortholog); ASSOCIATED WITH cataract (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 2 168427601 168442808 - 22301074;30032202 116892425 MODEL JAAIVD010000001;XM_032894112 XP_032750003 protein-coding 626034890 LOC116905593 40S ribosomal protein S15-like 7 25223497 25223915 - 116905593 MODEL JAAIVD010000026 pseudo 626034891 Fam81b family with sequence similarity 81 member B 3 220844566 220943208 + 116897355 MODEL JAAIVD010000012;XM_032899113 XP_032755004 protein FAM81B protein-coding 626034904 Faslg Fas ligand ENCODES a protein that exhibits cytokine activity (ortholog); death receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to type II interferon (ortholog); endosomal lumen acidification (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); cytoplasm (ortholog) 10 41080568 41093454 - 22301074;30032202 116911488 MODEL JAAIVD010000005;XM_032915470 XP_032771361 tumor necrosis factor ligand superfamily member 6 protein-coding 626034913 Mab21l1 mab-21 like 1 INVOLVED IN camera-type eye development (ortholog); eye development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Cerebellar, Ocular, Craniofacial, and Genital Syndrome (ortholog); FOUND IN nucleus (ortholog) 3 98676378 98678772 - 116896859 MODEL JAAIVD010000012;XM_032898370 XP_032754261 putative nucleotidyltransferase MAB21L1 protein-coding 626034918 Tubb6 tubulin beta 6 class V ASSOCIATED WITH Congenital Facial Palsy with Ptosis and Velopharyngeal Dysfunction (ortholog); Experimental Liver Cirrhosis (ortholog); ptosis (ortholog); FOUND IN intercellular bridge (ortholog); microtubule (ortholog); microtubule cytoskeleton (ortholog) 15 63887531 63897426 - 22301074;30032202 116884995 MODEL JAAIVD010000010;XM_032886222 XP_032742113 tubulin beta-6 chain protein-coding 626034926 LOC116897580 small nucleolar RNA SNORA17 3 7625253 7625376 - 116897580 MODEL JAAIVD010000012 pseudo 626034927 Nfe2 nuclear factor, erythroid 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); gene expression (ortholog); labyrinthine layer blood vessel development (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog); RNA polymerase II transcription regulator complex (ortholog) 1 259828645 259835899 + 30032202 116890185 MODEL JAAIVD010000025;XM_032890921 XP_032746812 transcription factor NF-E2 45 kDa subunit protein-coding 626034934 Gss glutathione synthetase ENCODES a protein that exhibits ATP binding (ortholog); glutathione binding (ortholog); glutathione synthase activity (ortholog); INVOLVED IN glutathione biosynthetic process (ortholog); response to amino acid (ortholog); response to cadmium ion (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; glutamic acid/glutamate metabolic pathway; glutathione metabolic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog) 5 134895200 134925205 - 22301074;30032202 116902180 MODEL JAAIVD010000023;XM_032904536;XM_032904537 XP_032760427;XP_032760428 protein-coding 626034954 LOC116895897 centrin-4 3 116716001 116720120 + 22301074;30032202 116895897 MODEL JAAIVD010000012;XM_032896982 XP_032752873 protein-coding 626034962 Sqstm1 sequestosome 1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN aggrephagy (ortholog); autophagy (ortholog); brown fat cell proliferation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; mitochondrial autophagy pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); alcoholic hepatitis (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN aggresome (ortholog); amphisome (ortholog); autolysosome (ortholog) 9 32865939 32877232 - 22301074;30032202 116908489 MODEL JAAIVD010000002;XM_032911643;XM_032911644;XM_032911645;XM_032911647 XP_032767534;XP_032767535;XP_032767536;XP_032767538 sequestosome-1 protein-coding 626034982 LOC116890401 5S ribosomal RNA 1 206419624 206419742 - 116890401 MODEL JAAIVD010000025;XR_004386603 rrna 626034985 Dtd2 D-aminoacyl-tRNA deacylase 2 ENCODES a protein that exhibits Ala-tRNA(Thr) deacylase activity (ortholog); D-tyrosyl-tRNA(Tyr) deacylase activity (ortholog); INVOLVED IN aminoacyl-tRNA metabolism involved in translational fidelity (ortholog) 7 65436665 65443562 - 22301074;30032202 116905039 MODEL JAAIVD010000026;XM_032907721 XP_032763612 protein-coding 626034992 LOC116889874 60S ribosomal protein L23a-like 1 155309962 155310413 - 116889874 MODEL JAAIVD010000025 pseudo 626034993 LOC116886465 zinc finger protein 431-like 17 43417853 43418302 + 22301074 116886465 MODEL JAAIVD010000011;XM_032887966 XP_032743857 protein-coding 626034996 Tnfrsf12a TNF receptor superfamily member 12A INVOLVED IN cell adhesion (ortholog); extrinsic apoptotic signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Experimental Liver Cirrhosis (ortholog); myocardial infarction (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); ruffle (ortholog) 9 982427 984442 - 22301074;30032202 116908954 MODEL JAAIVD010000002;XM_032912413 XP_032768304 tumor necrosis factor receptor superfamily member 12A protein-coding 626035004 Nop53 NOP53 ribosome biogenesis factor ENCODES a protein that exhibits 5S rRNA binding (ortholog); identical protein binding (ortholog); p53 binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 2 173007697 173015678 - 30032202 116892610 MODEL JAAIVD010000001;XM_032894412;XM_032894413 XP_032750303;XP_032750304 ribosome biogenesis protein NOP53 protein-coding 626035026 LOC116908382 small nucleolar RNA SNORA48 8 81885997 81886138 + 116908382 MODEL JAAIVD010000027;XR_004388929 snorna 626035029 LOC116910647 U6 spliceosomal RNA 9 74034005 74034111 - 116910647 MODEL JAAIVD010000002;XR_004389183 snrna 626035032 LOC116896819 vomeronasal type-2 receptor 1-like 3 91085431 91114435 + 22301074;30032202 116896819 MODEL JAAIVD010000012;XM_032898294 XP_032754185 protein-coding 626035041 Ccdc196 coiled-coil domain containing 196 7 91864668 91875888 - 116906141 MODEL JAAIVD010000026;XM_032909130 XP_032765021 putative coiled-coil domain-containing protein 196 protein-coding 626035053 LOC116898067 myosin regulatory light chain 12B-like 4 88219640 88220408 + 22301074;30032202 116898067 MODEL JAAIVD010000003;XM_032899461 XP_032755352 protein-coding 626035058 LOC116887834 cilia- and flagella-associated protein 47-like X 37550744 37563681 - 116887834 MODEL JAAIVD010000014;XM_032889346 XP_032745237 protein-coding 626035065 Lgalsl galectin like ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 11 89047820 89055520 - 22301074 116912214 MODEL JAAIVD010000006;XM_032916162 XP_032772053 galectin-related protein protein-coding 626035074 Ikbkg inhibitor of nuclear factor kappa B kinase regulatory subunit gamma ENCODES a protein that exhibits identical protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); linear polyubiquitin binding (ortholog); INVOLVED IN anoikis (ortholog); B cell homeostasis (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN FasL mediated signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); Behcet's disease (ortholog); Bloch-Sulzberger syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); IkappaB kinase complex (ortholog) X 128431077 128451167 + 22301074;30032202 116888341 MODEL JAAIVD010000014;XM_032889612 XP_032745503 NF-kappa-B essential modulator protein-coding 626035088 Osgin2 oxidative stress induced growth inhibitor family member 2 1 127766491 127785565 + 116903152 MODEL JAAIVD010000025;XM_032905520 XP_032761411 oxidative stress-induced growth inhibitor 2 protein-coding 626035098 Mef2d myocyte enhancer factor 2D ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adult heart development (ortholog); chondrocyte differentiation (ortholog); endochondral ossification (ortholog); ASSOCIATED WITH lung cancer (ortholog); migraine without aura (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 65392133 65419349 - 22301074;30032202 116896700 MODEL JAAIVD010000012;XM_032898103;XM_032898104;XM_032898105;XM_032898107;XR_004387358 XP_032753994;XP_032753995;XP_032753996;XP_032753998 myocyte-specific enhancer factor 2D protein-coding 626035126 Prim1 DNA primase subunit 1 ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); magnesium ion binding (ortholog); ribonucleotide binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); PRIMORDIAL DWARFISM-IMMUNODEFICIENCY-LIPODYSTROPHY SYNDROME (ortholog); Seckel syndrome (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog) 1 155495253 155510153 + 22301074;30032202 116905827 MODEL JAAIVD010000025;XM_032908796;XM_032908806 XP_032764687;XP_032764697 DNA primase small subunit protein-coding 626035146 Kcnh2 potassium voltage-gated channel subfamily H member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to xenobiotic stimulus (ortholog); membrane depolarization during action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Alstrom syndrome (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); inward rectifier potassium channel complex (ortholog) 6 153512317 153544419 - 22301074;30032202 116904200 MODEL JAAIVD010000024;XM_032907114;XM_032907115 XP_032763005;XP_032763006 protein-coding 626035170 Slc6a11 solute carrier family 6 member 11 ENCODES a protein that exhibits amino acid binding (ortholog); amino acid:sodium symporter activity (ortholog); gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); INVOLVED IN monocarboxylic acid transport (ortholog); neurotransmitter transport (ortholog); neurotransmitter uptake (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); melanoma (ortholog); Reperfusion Injury (ortholog); FOUND IN cell projection (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) 6 32269389 32387904 - 22301074;30032202 116903395 MODEL JAAIVD010000024;XM_032905897 XP_032761788 sodium- and chloride-dependent GABA transporter 3 protein-coding 626035188 LOC116883262 60S ribosomal protein L27a-like 14 75951687 75952131 - 116883262 MODEL JAAIVD010000009 pseudo 626035189 LOC116908062 RNA-binding protein EWS-like 8 49781865 49784019 - 116908062 MODEL JAAIVD010000027 pseudo 626035190 Tmem196 transmembrane protein 196 INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell migration (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog) 7 116266103 116335175 - 116905390 MODEL JAAIVD010000026;XM_032908336;XM_032908337;XM_032908338;XM_032908339;XM_032908340 XP_032764227;XP_032764228;XP_032764229;XP_032764230;XP_032764231 protein-coding 626035208 Tgs1 trimethylguanosine synthase 1 ENCODES a protein that exhibits RNA cap trimethylguanosine synthase activity (ortholog); INVOLVED IN 7-methylguanosine cap hypermethylation (ortholog); cellular response to fatty acid (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 73146983 73186115 - 22301074;30032202 116905090 MODEL JAAIVD010000026;XM_032907813;XM_032907814 XP_032763704;XP_032763705 trimethylguanosine synthase protein-coding 626035229 Selenos selenoprotein S ENCODES a protein that exhibits antioxidant activity (ortholog); ATPase binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to oxidative stress (ortholog); ASSOCIATED WITH colorectal adenoma (ortholog); colorectal carcinoma (ortholog); Inflammation (ortholog); FOUND IN cytoplasmic microtubule (ortholog); Derlin-1 retrotranslocation complex (ortholog); Derlin-1-VIMP complex (ortholog) 2 134266232 134276023 - 22301074;30032202 116891996 MODEL JAAIVD010000001;XM_032893450 XP_032749341 protein-coding 626035239 L2hgdh L-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits 2-hydroxyglutarate dehydrogenase activity (ortholog); INVOLVED IN small molecule metabolic process (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); cerebellar ataxia (ortholog); epilepsy (ortholog); FOUND IN membrane (ortholog); mitochondrion (ortholog) 7 83350710 83390939 - 30032202 116905123 MODEL JAAIVD010000026;XM_032907867 XP_032763758 L-2-hydroxyglutarate dehydrogenase, mitochondrial protein-coding 626035253 Insyn2a inhibitory synaptic factor 2A INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) 2 66969943 67025251 + 30032202 116891381 MODEL JAAIVD010000001;XM_032892395;XM_032892396 XP_032748286;XP_032748287 protein-coding 626035266 C16H12orf43 chromosome 16 C12orf43 homolog ASSOCIATED WITH type 2 diabetes mellitus (ortholog) 16 38879590 38885282 - 30032202 116885328 MODEL JAAIVD010000004;XM_032886593 XP_032742484 protein CUSTOS protein-coding 626035276 LOC116900489 olfactory receptor 4X2-like 5 71728749 71729678 - 22301074 116900489 MODEL JAAIVD010000023;XM_032902224 XP_032758115 protein-coding 626035279 Ctdsp1 CTD small phosphatase 1 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of neurogenesis (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; RNA polymerase II transcription pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 147839059 147844671 + 22301074;30032202 116899499 MODEL JAAIVD010000003;XM_032901341;XM_032901342;XM_032901343 XP_032757232;XP_032757233;XP_032757234 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 protein-coding 626035298 LOC116886724 small nucleolar RNA SNORA14 17 46466440 46466573 - 116886724 MODEL JAAIVD010000011;XR_004386136 snorna 626035301 LOC116907775 cholesterol side-chain cleavage enzyme, mitochondrial ENCODES a protein that exhibits cholesterol monooxygenase (side-chain-cleaving) activity (ortholog); heme binding (ortholog); INVOLVED IN C21-steroid hormone biosynthetic process (ortholog); cellular response to antibiotic (ortholog); cellular response to cadmium ion (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); Adrenal Insufficiency (ortholog); autism spectrum disorder (ortholog); FOUND IN mitochondrial crista (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 51884470 51895864 + 22301074;30032202 116907775 MODEL JAAIVD010000027;XM_032910918 XP_032766809 protein-coding 626035314 LOC116913245 replication factor C subunit 5-like 12 78131415 78132414 + 116913245 MODEL JAAIVD010000007 pseudo 626035315 LOC116911450 ATP synthase F(0) complex subunit C2, mitochondrial-like 10 36860131 36860549 - 116911450 MODEL JAAIVD010000005 pseudo 626035316 Olfm4 olfactomedin 4 ENCODES a protein that exhibits cadherin binding (ortholog); structural molecule activity (ortholog); INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of immune response (ortholog); positive regulation of substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN azurophil granule (ortholog); cytosol (ortholog); extracellular space (ortholog) 12 44331054 44353450 - 30032202 116913925 MODEL JAAIVD010000007;XM_032918193 XP_032774084 olfactomedin-4 protein-coding 626035325 Myh13 myosin heavy chain 13 INVOLVED IN cellular response to starvation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); FOUND IN myofibril (ortholog) 9 46929115 46985186 + 22301074 116909072 MODEL JAAIVD010000002;XM_032912547 XP_032768438 myosin-13 protein-coding 626035367 Pikfyve phosphoinositide kinase, FYVE-type zinc finger containing ENCODES a protein that exhibits 1-phosphatidylinositol-3-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); 1-phosphatidylinositol-5-kinase activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate metabolic process (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Crohn's disease (ortholog); Fleck corneal dystrophy (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 4 139063298 139145732 + 22301074;30032202 116899462 MODEL JAAIVD010000003;XM_032901247;XM_032901249;XM_032901250;XM_032901251;XM_032901252;XM_032901253;XM_032901254;XM_032901255;XM_032901256;XM_032901257;XM_032901258;XM_032901260 XP_032757138;XP_032757140;XP_032757141;XP_032757142;XP_032757143;XP_032757144;XP_032757145;XP_032757146;XP_032757147;XP_032757148;XP_032757149;XP_032757151 1-phosphatidylinositol 3-phosphate 5-kinase protein-coding 626035441 LOC116910897 peptidyl-prolyl cis-trans isomerase D-like 10 43239938 43241042 + 116910897 MODEL JAAIVD010000005 pseudo 626035442 Hivep3 HIVEP zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) 1 36850811 37165963 - 30032202 116897359 MODEL JAAIVD010000025;XM_032899121 XP_032755012 transcription factor HIVEP3 protein-coding 626035455 Nccrp1 NCCRP1, F-box associated domain containing INVOLVED IN positive regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 167453548 167456508 + 30032202 116892386 MODEL JAAIVD010000001;XM_032894052 XP_032749943 F-box only protein 50 protein-coding 626035464 LOC116883283 uncharacterized LOC116883283 14 25827577 25827981 + 116883283 MODEL JAAIVD010000009;XR_004385740 ncrna 626035468 Ank3 ankyrin 3 ENCODES a protein that exhibits cadherin binding (ortholog); channel activator activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axon development (ortholog); axon guidance (ortholog); ASSOCIATED WITH alcohol-related birth defects (ortholog); autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 37 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); basal plasma membrane (ortholog) 18 16850639 17168494 - 22301074 116887177 MODEL JAAIVD010000013;XM_032888729;XM_032888730;XM_032888731;XM_032888732;XM_032888733 XP_032744620;XP_032744621;XP_032744622;XP_032744623;XP_032744624 ankyrin-3 protein-coding 626035529 Hoxb9 homeobox B9 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cell chemotaxis (ortholog); embryonic skeletal system development (ortholog); ASSOCIATED WITH Acute Erythroleukemia (ortholog); Breast Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase II transcription regulator complex (ortholog) 9 58109201 58114325 - 22301074;30032202 116908553 MODEL JAAIVD010000002;XM_032911757 XP_032767648 homeobox protein Hox-B9 protein-coding 626035535 LOC116913922 heterogeneous nuclear ribonucleoprotein H3-like 12 30214604 30368865 - 22301074;30032202 116913922 MODEL JAAIVD010000007;XM_032918191 XP_032774082 protein-coding 626035540 Ythdf1 YTH N6-methyladenosine RNA binding protein F1 ENCODES a protein that exhibits N6-methyladenosine-containing RNA reader activity (ortholog); ribosome binding (ortholog); INVOLVED IN learning (ortholog); memory (ortholog); mRNA destabilization (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); multiple myeloma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); P-body (ortholog) 5 158014908 158030106 - 30032202 116902423 MODEL JAAIVD010000023;XM_032904953 XP_032760844 YTH N6-methyladenosine RNA binding protein 1;YTH domain-containing family protein 1 protein-coding 626035549 Znf646 zinc finger protein 646 2 74020187 74030147 - 30032202 116891451 MODEL JAAIVD010000001;XM_032892519;XM_032892520;XM_032892521 XP_032748410;XP_032748411;XP_032748412 protein-coding 626035560 Ms4a8 membrane spanning 4-domains A8 FOUND IN plasma membrane (ortholog) 2 10544322 10558469 - 30032202 116890977 MODEL JAAIVD010000001;XM_032891643;XM_032891644 XP_032747534;XP_032747535 membrane-spanning 4-domains subfamily A member 8 protein-coding 626035576 LOC116895223 guanylate-binding protein 6-like 3 18085942 18089498 + 22301074;30032202 116895223 MODEL JAAIVD010000012;XM_032896550 XP_032752441 protein-coding 626035581 LOC116889797 glutathione S-transferase P-like 22301074;30032202 116889797 MODEL JAAIVD010000596;XM_032890646 XP_032746537 protein-coding 626035582 Gtf2h5 general transcription factor IIH subunit 5 INVOLVED IN cellular response to gamma radiation (ortholog); maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); nucleotide-excision repair (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH genetic disease (ortholog); photosensitive trichothiodystrophy 3 (ortholog); FOUND IN nucleolus (ortholog); transcription factor TFIID complex (ortholog) 2 192730467 192736291 - 22301074;30032202 116892853 MODEL JAAIVD010000001;XM_032894747 XP_032750638 protein-coding 626035589 LOC116894277 caspase-3-like 2 121592432 121593263 + 116894277 MODEL JAAIVD010000001 pseudo 626035590 LOC116884824 transcription initiation factor TFIID subunit 4B-like 15 24832215 24858848 - 22301074;30032202 116884824 MODEL JAAIVD010000010;XM_032886060 XP_032741951 protein-coding 626035601 Adra2c adrenoceptor alpha 2C ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); alpha2-adrenergic receptor activity (ortholog); epinephrine binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); female pregnancy (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Fibrosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) 11 69792228 69794766 - 22301074;30032202 116912714 MODEL JAAIVD010000006;XM_032916841 XP_032772732 alpha-2C adrenergic receptor protein-coding 626035606 Mab21l3 mab-21 like 3 3 56240337 56262837 + 116895384 MODEL JAAIVD010000012;XM_032896677 XP_032752568 protein mab-21-like 3 protein-coding 626035617 Agbl5 AGBL carboxypeptidase 5 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin binding (ortholog); INVOLVED IN C-terminal protein deglutamylation (ortholog); defense response to virus (ortholog); protein branching point deglutamylation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinitis pigmentosa (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) 7 23177512 23197339 - 22301074 116905996 MODEL JAAIVD010000026;XM_032909028;XM_032909029;XM_032909030;XM_032909032;XM_032909033;XM_032909034 XP_032764919;XP_032764920;XP_032764921;XP_032764923;XP_032764924;XP_032764925 ATP/GTP binding protein like 5;cytosolic carboxypeptidase-like protein 5 protein-coding 626035656 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 20918237 20918308 - 116889586 MODEL JAAIVD010000014 trna 626035657 Rnasel ribonuclease L ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoprotein complex binding (ortholog); RNA binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of viral genome replication (ortholog); positive regulation of D-glucose import (ortholog); ASSOCIATED WITH Animal Viral Hepatitis (ortholog); anthrax disease (ortholog); Cardiovirus Infections (ortholog); FOUND IN nuclear matrix (ortholog) 10 33204912 33214691 + 22301074;30032202 116911147 MODEL JAAIVD010000005;XM_032914999 XP_032770890 2-5A-dependent ribonuclease protein-coding 626035668 LOC116888727 olfactory receptor 13C3-like 1 102146829 102147866 + 22301074 116888727 MODEL JAAIVD010000025;XM_032890021 XP_032745912 protein-coding 626035672 Kansl3 KAT8 regulatory NSL complex subunit 3 INVOLVED IN regulation of mitochondrial transcription (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN histone acetyltransferase complex (ortholog); mitochondrion (ortholog); NSL complex (ortholog) 4 112553346 112586593 - 30032202 116899288 MODEL JAAIVD010000003;XM_032900920;XM_032900921;XM_032900922;XM_032900923;XM_032900924;XM_032900925;XM_032900927;XM_032900928 XP_032756811;XP_032756812;XP_032756813;XP_032756814;XP_032756815;XP_032756816;XP_032756818;XP_032756819 protein-coding 626035718 Piga phosphatidylinositol glycan anchor biosynthesis class A INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 4B (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) X 24995938 25008826 + 22301074;30032202 116888511 MODEL JAAIVD010000014;XM_032889805;XM_032889806;XM_032889807;XM_032889808;XM_032889809;XM_032889810;XM_032889811 XP_032745696;XP_032745697;XP_032745698;XP_032745699;XP_032745700;XP_032745701;XP_032745702 phosphatidylinositol N-acetylglucosaminyltransferase subunit A protein-coding 626035745 LOC116894958 small nucleolar RNA SNORD35 2 154417603 154417682 + 116894958 MODEL JAAIVD010000001;XR_004387152 snorna 626035748 LOC116899882 small nucleolar RNA SNORA17 4 107964778 107964900 - 116899882 MODEL JAAIVD010000003 pseudo 626035749 LOC116900786 seminal vesicle secretory protein 3A-like 5 153722765 153725028 + 22301074;30032202 116900786 MODEL JAAIVD010000023;XM_032902497 XP_032758388 protein-coding 626035756 Zc3h12a zinc finger CCCH-type containing 12A ENCODES a protein that exhibits chromatin binding (ortholog); cysteine-type deubiquitinase activity (ortholog); DNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to chemokine (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH Acute Experimental Autoimmune Encephalomyelitis (ortholog); Acute Lung Injury (ortholog); Arterial Occlusive Diseases (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytoskeleton (ortholog) 1 33178537 33187725 + 30032202 116896766 MODEL JAAIVD010000025;XM_032898224 XP_032754115 endoribonuclease ZC3H12A protein-coding 626035766 Rtl5 retrotransposon Gag like 5 X 59866884 59869041 - 116887928 MODEL JAAIVD010000014;XM_032889393 XP_032745284 retrotransposon Gag-like protein 5 protein-coding 626035770 Slc2a2 solute carrier family 2 member 2 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN carbohydrate utilization (ortholog); cellular response to fatty acid (ortholog); D-glucose transmembrane transport (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; Fanconi syndrome pathway; forkhead class A signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border (ortholog) 3 125949350 125977372 - 22301074;30032202 116896985 MODEL JAAIVD010000012;XM_032898577 XP_032754468 solute carrier family 2, facilitated glucose transporter member 2 protein-coding 626035785 LOC116886743 small nucleolar RNA SNORA17 17 4066885 4067004 + 116886743 MODEL JAAIVD010000011 pseudo 626035786 LOC116884477 protocadherin alpha-8-like 15 7388218 7394679 - 22301074 116884477 MODEL JAAIVD010000010;XM_032885593 XP_032741484 protein-coding 626035791 LOC116890345 U6 spliceosomal RNA 1 123656076 123656184 + 116890345 MODEL JAAIVD010000025;XR_004386567 snrna 626035794 LOC116897975 vomeronasal type-2 receptor 116-like 4 22002584 22026649 + 22301074;30032202 116897975 MODEL JAAIVD010000003;XM_032899378 XP_032755269 protein-coding 626035803 LOC116905926 uncharacterized LOC116905926 7 91318162 91319218 + 116905926 MODEL JAAIVD010000026;XR_004388580 ncrna 626035807 LOC116890383 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit 1 44889150 44995664 + 116890383 MODEL JAAIVD010000025 pseudo 626035808 LOC116903036 putative vomeronasal receptor-like protein 4 6 159346503 159347399 - 22301074;30032202 116903036 MODEL JAAIVD010000024;XM_032905339 XP_032761230 protein-coding 626035811 LOC116900077 activated RNA polymerase II transcriptional coactivator p15-like 5 10377562 10377936 + 116900077 MODEL JAAIVD010000023 pseudo 626035812 LOC116896514 histone H2A type 2-B 3 61065609 61066139 - 22301074;30032202 116896514 MODEL JAAIVD010000012;XM_032897696 XP_032753587 protein-coding 626035817 Col8a1 collagen type VIII alpha 1 chain INVOLVED IN camera-type eye morphogenesis (ortholog); endodermal cell differentiation (ortholog); endothelial cell proliferation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); diastolic heart failure (ortholog); dilated cardiomyopathy (ortholog) 4 41717737 41846631 - 22301074;30032202 116897922 MODEL JAAIVD010000003;XM_032899322;XM_032899323 XP_032755213;XP_032755214 collagen alpha-1(VIII) chain protein-coding 626035828 LOC116907264 putative methyl-CpG-binding domain protein 3-like 3 8 14531486 14532948 + 116907264 MODEL JAAIVD010000027 pseudo 626035829 LOC116908406 small nucleolar RNA SNORA17 8 70981320 70981448 - 116908406 MODEL JAAIVD010000027;XR_004388949 snorna 626035832 Hoxa5 homeobox A5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bronchiole development (ortholog); cartilage morphogenesis (ortholog); ASSOCIATED WITH Diaphragmatic Hernia (ortholog); head and neck squamous cell carcinoma (ortholog); Mouth Neoplasms (ortholog); FOUND IN nucleus (ortholog) 6 88856458 88860848 + 22301074;30032202 116903804 MODEL JAAIVD010000024;XM_032906502 XP_032762393 homeobox protein Hox-A5 protein-coding 626035838 Brd10 bromodomain containing 10 2 29814852 29892623 - 22301074 116891077 MODEL JAAIVD010000001;XM_032891784;XM_032891785;XM_032891786;XM_032891787;XM_032891788;XR_004386811;XR_004386812;XR_004386813;XR_004386814 XP_032747675;XP_032747676;XP_032747677;XP_032747678;XP_032747679 Kiaa2026 uncharacterized protein KIAA2026 homolog protein-coding 626035868 LOC116889517 small nucleolar RNA SNORA17 X 30835841 30835972 - 116889517 MODEL JAAIVD010000014;XR_004386460 snorna 626035871 LOC116904327 peroxiredoxin-6-like 6 64396960 64398569 + 116904327 MODEL JAAIVD010000024 pseudo 626035872 C9H16orf90 chromosome 9 C16orf90 homolog 9 17936541 17939435 + 116910067 MODEL JAAIVD010000002;XM_032913879;XM_032913880 XP_032769770;XP_032769771 uncharacterized protein C16orf90 homolog protein-coding 626035882 Cacna2d1 calcium voltage-gated channel auxiliary subunit alpha2delta 1 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity involved in bundle of His cell action potential (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH brain infarction (ortholog); breast carcinoma (ortholog); Brugada syndrome (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); L-type voltage-gated calcium channel complex (ortholog) 6 145424106 145954628 + 30032202 116904157 MODEL JAAIVD010000024;XM_032907054 XP_032762945 voltage-dependent calcium channel subunit alpha-2/delta-1 protein-coding 626035925 LOC116893150 60S ribosomal protein L23-like 2 98348438 98348875 + 116893150 MODEL JAAIVD010000001 pseudo 626035926 Itga4 integrin subunit alpha 4 ENCODES a protein that exhibits antigen binding (ortholog); C-X3-C chemokine binding (ortholog); cell adhesion molecule binding (ortholog); INVOLVED IN axonogenesis involved in innervation (ortholog); blood vessel remodeling (ortholog); cell adhesion (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) 5 56487020 56559407 + 22301074;30032202 116901559 MODEL JAAIVD010000023;XM_032903554 XP_032759445 integrin alpha-4 protein-coding 626035958 LOC116898159 Golgi phosphoprotein 3-like 4 119818688 119819598 + 116898159 MODEL JAAIVD010000003 pseudo 626035959 LOC116913895 putative nucleoside diphosphate kinase 12 22219477 22221233 + 116913895 MODEL JAAIVD010000007 pseudo 626035960 Mrpl24 mitochondrial ribosomal protein L24 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 65636584 65642232 - 22301074;30032202 116896711 MODEL JAAIVD010000012;XM_032898126;XM_032898128;XM_032898129 XP_032754017;XP_032754019;XP_032754020 39S ribosomal protein L24, mitochondrial protein-coding 626035978 LOC116902656 U6 spliceosomal RNA 5 93460152 93460258 + 116902656 MODEL JAAIVD010000023;XR_004388219 snrna 626035981 C2H10orf62 chromosome 2 C10orf62 homolog 2 41166450 41167806 + 116891172 MODEL JAAIVD010000001;XM_032891984 XP_032747875 uncharacterized protein C10orf62 homolog protein-coding 626035986 LOC116904386 fibroblast growth factor receptor 1-like 6 92634403 92636750 + 116904386 MODEL JAAIVD010000024 pseudo 626035987 Ncbp2 nuclear cap binding protein subunit 2 ENCODES a protein that exhibits DNA binding (ortholog); mRNA binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN histone mRNA metabolic process (ortholog); mRNA cis splicing, via spliceosome (ortholog); mRNA export from nucleus (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway; FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 16770224 16794850 + 30032202 116898759 MODEL JAAIVD010000003;XM_032900079;XM_032900080;XM_032900081;XM_032900082;XM_032900083;XM_032900084;XM_032900085;XM_032900086;XM_032900088 XP_032755970;XP_032755971;XP_032755972;XP_032755973;XP_032755974;XP_032755975;XP_032755976;XP_032755977;XP_032755979 nuclear cap-binding protein subunit 2 protein-coding 626036017 Galnt15 polypeptide N-acetylgalactosaminyltransferase 15 ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN transport vesicle (ortholog) 13 7722777 7755384 + 30032202 116914624 MODEL JAAIVD010000008;XM_032918987 XP_032774878 protein-coding 626036031 Hspa1l heat shock protein family A (Hsp70) member 1 like ENCODES a protein that exhibits heat shock protein binding (ortholog); ubiquitin protein ligase binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); protein refolding (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); Crohn's disease (ortholog); drug allergy (ortholog); FOUND IN cell body (ortholog); COP9 signalosome (ortholog); cytosol (ortholog) 18 7572706 7575027 + 22301074;30032202 116887180 MODEL JAAIVD010000013;XM_032888734 XP_032744625 heat shock 70 kDa protein 1-like protein-coding 626036036 Tomm40 translocase of outer mitochondrial membrane 40 ENCODES a protein that exhibits monoatomic cation channel activity (ortholog); preprotein binding (ortholog); protein transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); protein import into mitochondrial matrix (ortholog); protein insertion into mitochondrial membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; intermembrane space assembly pathway of mitochondrial protein import; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); cerebral infarction (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 2 170904102 170915835 + 22301074;30032202 116892512 MODEL JAAIVD010000001;XM_032894266 XP_032750157 mitochondrial import receptor subunit TOM40 homolog protein-coding 626036050 LOC116911857 small nucleolar RNA U13 10 28199445 28199549 - 116911857 MODEL JAAIVD010000005;XR_004389379 snorna 626036053 Get3 guided entry of tail-anchored proteins factor 3, ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); membrane insertase activity (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); ASSOCIATED WITH Dilated Cardiomyopathy 2H (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); GET complex (ortholog); nucleolus (ortholog) 17 15264983 15274224 + 22301074;30032202 116886162 MODEL JAAIVD010000011;XM_032887532;XM_032887533;XM_032887534 XP_032743423;XP_032743424;XP_032743425 ATPase ASNA1 protein-coding 626036073 LOC116898128 cofilin-2-like 4 109961080 109961585 - 116898128 MODEL JAAIVD010000003 pseudo 626036074 Mafk MAF bZIP transcription factor K ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 16 13390311 13401210 - 30032202 116885311 MODEL JAAIVD010000004;XM_032886573 XP_032742464 transcription factor MafK protein-coding 626036081 Tnpo3 transportin 3 ENCODES a protein that exhibits identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ASSOCIATED WITH autosomal dominant limb-girdle muscular dystrophy (ortholog); autosomal dominant limb-girdle muscular dystrophy type 2 (ortholog); genetic disease (ortholog); FOUND IN annulate lamellae (ortholog); cytosol (ortholog); nuclear envelope (ortholog) 6 109948020 110023663 + 30032202 116904011 MODEL JAAIVD010000024;XM_032906827;XM_032906828 XP_032762718;XP_032762719 transportin-3 protein-coding 626036112 LOC116895459 endoplasmic reticulum-Golgi intermediate compartment protein 2-like 3 82233853 82234310 - 30032202 116895459 MODEL JAAIVD010000012;XM_032896728 XP_032752619 protein-coding 626036117 LOC116908422 small nucleolar RNA SNORA17 8 91250109 91250236 + 116908422 MODEL JAAIVD010000027;XR_004388956 snorna 626036120 Lama5 laminin subunit alpha 5 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); integrin binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); branching involved in salivary gland morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH benign familial hematuria (ortholog); bent bone dysplasia syndrome 1 (ortholog); bent bone dysplasia syndrome 2 (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular matrix of synaptic cleft (ortholog) 5 157258982 157307569 - 22301074 116902405 MODEL JAAIVD010000023;XM_032904935 XP_032760826 laminin subunit alpha-5 protein-coding 626036202 LOC116896024 developmental pluripotency-associated protein 4-like 3 182046695 182181688 - 116896024 MODEL JAAIVD010000012 pseudo 626036203 LOC116910019 40S ribosomal protein S8-like 1 161326883 161332100 - 116910019 MODEL JAAIVD010000025 pseudo 626036204 LOC116889955 olfactory receptor 6C75 1 161738139 161739107 + 22301074;30032202 116889955 MODEL JAAIVD010000025;XM_032890758 XP_032746649 protein-coding 626036207 Nudt9 nudix hydrolase 9 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 14112316 14131239 + 30032202 116912456 MODEL JAAIVD010000006;XM_032916523 XP_032772414 ADP-ribose pyrophosphatase, mitochondrial protein-coding 626036219 LOC116902464 U6 spliceosomal RNA 5 80946863 80946969 - 116902464 MODEL JAAIVD010000023;XR_004388082 snrna 626036222 Stard3nl STARD3 N-terminal like ENCODES a protein that exhibits cholesterol binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN vesicle tethering to endoplasmic reticulum (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-endosome membrane contact site (ortholog); endosome (ortholog) 14 38082140 38116078 - 116883405 MODEL JAAIVD010000009;XM_032884528 XP_032740419 STARD3 N-terminal-like protein protein-coding 626036235 LOC116891678 charged multivesicular body protein 1b-like 2 91816992 91818640 + 116891678 MODEL JAAIVD010000001 pseudo 626036236 Ier3 immediate early response 3 INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); COVID-19 (ortholog); hypertension (ortholog); FOUND IN nucleus (ortholog) 18 9034883 9036113 + 22301074;30032202 116887466 MODEL JAAIVD010000013;XM_032889074 XP_032744965 radiation-inducible immediate-early gene IEX-1 protein-coding 626036242 Ranbp6 RAN binding protein 6 FOUND IN mitochondrion (ortholog); synapse (ortholog) 2 29895522 29899510 - 22301074;30032202 116891078 MODEL JAAIVD010000001;XM_032891789;XM_032891790 XP_032747680;XP_032747681 ran-binding protein 6 protein-coding 626036252 LOC116913039 U6 spliceosomal RNA 11 40784858 40784964 + 116913039 MODEL JAAIVD010000006;XR_004389576 snrna 626036255 LOC116897471 U7 small nuclear RNA 3 114053851 114053911 + 116897471 MODEL JAAIVD010000012;XR_004387497 snrna 626036258 Tprg1 tumor protein p63 regulated 1 FOUND IN cytoplasm (ortholog) 4 10080250 10215231 + 30032202 116897827 MODEL JAAIVD010000003;XM_032899238 XP_032755129 tumor protein p63-regulated gene 1 protein protein-coding 626036268 Gipc1 GIPC PDZ domain containing family member 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); myosin binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); chemical synaptic transmission (ortholog); endothelial cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH oculopharyngodistal myopathy 2 (ortholog); FOUND IN brush border (ortholog); cell cortex (ortholog); cytoplasm (ortholog) 17 16608485 16620958 - 22301074 116886319 MODEL JAAIVD010000011;XM_032887761;XM_032887763 XP_032743652;XP_032743654 PDZ domain-containing protein GIPC1 protein-coding 626036285 Tmem200a transmembrane protein 200A 2 212016632 212095765 - 116892958 MODEL JAAIVD010000001;XM_032894907;XM_032894908 XP_032750798;XP_032750799 protein-coding 626036296 LOC116888592 40S ribosomal protein S21-like X 65783868 65784269 - 116888592 MODEL JAAIVD010000014;XR_004386326 pseudo 626036299 Tab1 TGF-beta activated kinase 1 (MAP3K7) binding protein 1 ENCODES a protein that exhibits kinase activator activity (ortholog); MAP kinase kinase kinase activity (ortholog); mitogen-activated protein kinase p38 binding (ortholog); INVOLVED IN aorta development (ortholog); canonical NF-kappaB signal transduction (ortholog); cardiac septum development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 249898434 249927523 + 30032202 116890023 MODEL JAAIVD010000025;XM_032890805 XP_032746696 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 protein-coding 626036313 Gtf3c6 general transcription factor IIIC subunit 6 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); transcription factor TFIIIC complex (ortholog) 18 40026375 40036092 - 30032202 116887124 MODEL JAAIVD010000013;XM_032888671 XP_032744562 general transcription factor 3C polypeptide 6 protein-coding 626036323 C18H6orf15 chromosome 18 C6orf15 homolog ENCODES a protein that exhibits collagen binding (ortholog); collagen V binding (ortholog); fibronectin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 18 8771421 8772774 + 30032202 116887458 MODEL JAAIVD010000013;XM_032889066 XP_032744957 uncharacterized protein C6orf15 homolog protein-coding 626036327 Zcwpw1 zinc finger CW-type and PWWP domain containing 1 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); histone reader activity (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); epigenetic regulation of gene expression (ortholog); homologous chromosome pairing at meiosis (ortholog); FOUND IN nucleus (ortholog); XY body (ortholog) 16 16204506 16235592 - 22301074;30032202 116885776 MODEL JAAIVD010000004;XM_032887097 XP_032742988 zinc finger CW-type PWWP domain protein 1 protein-coding 626036348 LOC116897920 cell cycle control protein 50C 4 41377039 41394652 - 30032202 116897920 MODEL JAAIVD010000003;XM_032899321 XP_032755212 protein-coding 626036359 LOC116900498 olfactory receptor 4A5-like 5 71926722 71927666 - 22301074 116900498 MODEL JAAIVD010000023;XM_032902233 XP_032758124 protein-coding 626036362 Yy2 YY2 transcription factor ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) X 35267948 35275870 - 30032202 116888388 Q2FAY8 MODEL DQ107161;JAAIVD010000014;XM_032889662 AAZ38710;Q2FAY8;XP_032745553 YY-2 Yin and yang 2;transcription factor YY2 protein-coding 626036368 LOC116898297 mortality factor 4-like protein 2 4 182232382 182233294 - 116898297 MODEL JAAIVD010000003 pseudo 626036369 LOC116894722 mitochondrial import inner membrane translocase subunit Tim23-like 2 22489330 22490623 - 116894722 MODEL JAAIVD010000001 pseudo 626036370 LOC116911633 myosin light polypeptide 6-like 10 77382991 77383646 - 22301074;30032202 116911633 MODEL JAAIVD010000005;XM_032915593 XP_032771484 protein-coding 626036375 LOC116884068 small nucleolar RNA SNORA48 14 79648947 79649087 + 116884068 MODEL JAAIVD010000009;XR_004385816 snorna 626036378 Mag myelin associated glycoprotein ENCODES a protein that exhibits ganglioside GT1b binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell adhesion (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); ASSOCIATED WITH Acute Experimental Autoimmune Encephalomyelitis (ortholog); angiostrongyliasis (ortholog); Brain Injuries (ortholog); FOUND IN compact myelin (ortholog); mesaxon (ortholog); myelin sheath (ortholog) 2 165104842 165120456 + 116892298 MODEL JAAIVD010000001;XM_032893909;XM_032893910;XM_032893911;XM_032893912;XM_032893913;XM_032893914 XP_032749800;XP_032749801;XP_032749802;XP_032749803;XP_032749804;XP_032749805 myelin-associated glycoprotein protein-coding 626036408 LOC116910660 nucleus accumbens-associated protein 1-like 1 210916118 210917588 + 116910660 MODEL JAAIVD010000025 pseudo 626036409 Prnp prion protein (Kanno blood group) ENCODES a protein that exhibits amyloid-beta binding (ortholog); aspartic-type endopeptidase inhibitor activity (ortholog); ATP-dependent protein binding (ortholog); INVOLVED IN amyloid precursor protein metabolic process (ortholog); cellular response to amyloid-beta (ortholog); cellular response to copper ion (ortholog); PARTICIPATES IN glypican signaling pathway; iron uptake pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); Cerebral Amyloidosis with Spongiform Encephalopathy (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); dendrite (ortholog) 5 111647621 111662784 + 22301074 116901995 MODEL JAAIVD010000023;XM_032904254 XP_032760145 major prion protein protein-coding 626036416 LOC116883344 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like 14 59845726 59875530 + 22301074;30032202 116883344 MODEL JAAIVD010000009;XM_032884420 XP_032740311 protein-coding 626036423 Lcp1 lymphocyte cytosolic protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); animal organ regeneration (ortholog); cell migration (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Experimental Liver Cirrhosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); actin filament bundle (ortholog) 12 49167384 49266204 - 22301074;30032202 116913684 MODEL JAAIVD010000007;XM_032917972;XM_032917974;XM_032917975 XP_032773863;XP_032773865;XP_032773866 plastin-2 protein-coding 626036451 LOC116893453 leukocyte immunoglobulin-like receptor subfamily B member 3 2 178436568 178440492 - 30032202 116893453 MODEL JAAIVD010000001;XM_032895218 XP_032751109 protein-coding 626036463 LOC116912216 uncharacterized LOC116912216 11 89055526 89058514 + 116912216 MODEL JAAIVD010000006;XR_004389433;XR_004389434 ncrna 626036470 Fgd4 FYVE, RhoGEF and PH domain containing 4 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); INVOLVED IN lamellipodium assembly (ortholog); microspike assembly (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4H (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog) 4 1663821 1798557 - 22301074;30032202 116898616 MODEL JAAIVD010000003;XM_032899826 XP_032755717 FYVE, RhoGEF and PH domain-containing protein 4 protein-coding 626036491 Wdr86 WD repeat domain 86 6 153924239 153941083 - 22301074 116903017 MODEL JAAIVD010000024;XM_032905330 XP_032761221 WD repeat-containing protein 86 protein-coding 626036500 LOC116905677 bile salt sulfotransferase 7 49556673 49575314 + 22301074;30032202 116905677 MODEL JAAIVD010000026;XM_032908660 XP_032764551 protein-coding 626036507 Adissp adipose secreted signaling protein ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); glucose homeostasis (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN extracellular space (ortholog) 5 110873129 110886549 - 116901984 MODEL JAAIVD010000023;XM_032904231;XM_032904232 XP_032760122;XP_032760123 C5H20orf27 UPF0687 protein C20orf27 homolog;chromosome 5 C20orf27 homolog protein-coding 626036522 LOC116891012 BTB/POZ domain-containing protein KCTD18-like 2 7307588 7308728 - 116891012 MODEL JAAIVD010000001 pseudo 626036523 Abcg5 ATP binding cassette subfamily G member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); negative regulation of intestinal cholesterol absorption (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); atherosclerosis (ortholog); autosomal dominant tubulointerstitial kidney disease 5 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); ATP-binding cassette (ABC) transporter complex (ortholog) 7 8224763 8249962 + 22301074;30032202 116905534 MODEL JAAIVD010000026;XM_032908571 XP_032764462 ATP-binding cassette sub-family G member 5 protein-coding 626036540 Atg9a autophagy related 9A ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); bone morphogenesis (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN autophagosome (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 4 148540005 148550701 - 30032202 116899522 MODEL JAAIVD010000003;XM_032901382;XM_032901383;XM_032901384;XM_032901385;XM_032901386 XP_032757273;XP_032757274;XP_032757275;XP_032757276;XP_032757277 autophagy-related protein 9A protein-coding 626036570 Scube3 signal peptide, CUB domain and EGF like domain containing 3 ENCODES a protein that exhibits BMP binding (ortholog); BMP receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of BMP signaling pathway (ortholog); positive regulation of osteoblast differentiation (ortholog); positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 18 5686300 5715826 - 22301074;30032202 116886865 MODEL JAAIVD010000013;XM_032888321 XP_032744212 signal peptide, CUB and EGF-like domain-containing protein 3 protein-coding 626036595 LOC116894654 60S ribosomal protein L28-like 2 204192971 204193443 - 116894654 MODEL JAAIVD010000001;XR_004387034 pseudo 626036598 LOC116909420 olfactory receptor 1500-like 9 44628401 44629345 - 22301074;30032202 116909420 MODEL JAAIVD010000002;XM_032912995 XP_032768886 protein-coding 626036601 LOC116895621 UDP-glucuronosyltransferase 3A2-like 3 171288947 171318472 - 22301074 116895621 MODEL JAAIVD010000012;XM_032896832 XP_032752723 protein-coding 626036610 LOC116904247 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like 6 158934126 158934334 + 22301074;30032202 116904247 MODEL JAAIVD010000024;XM_032907205 XP_032763096 protein-coding 626036614 Ephb4 EPH receptor B4 ENCODES a protein that exhibits ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell migration involved in sprouting angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH arteriovenous malformation (ortholog); Breast Neoplasms (ortholog); cancer (ortholog); FOUND IN plasma membrane (ortholog) 16 16654177 16680981 - 22301074;30032202 116885199 MODEL JAAIVD010000004;XM_032886424;XM_032886425 XP_032742315;XP_032742316 ephrin type-B receptor 4 protein-coding 626036637 LOC116907938 uncharacterized LOC116907938 8 111396109 111402752 + 116907938 MODEL JAAIVD010000027;XR_004388855 ncrna 626036642 Gng12 G protein subunit gamma 12 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphate ion binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; follicle-stimulating hormone signaling pathway; FOUND IN actin filament (ortholog); synapse (ortholog) 6 76459975 76558315 + 22301074;30032202 116903702 MODEL JAAIVD010000024;XM_032906377;XM_032906378 XP_032762268;XP_032762269 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-12 protein-coding 626036652 LOC116907386 olfactory receptor 7G2-like 8 15760528 15761478 + 22301074;30032202 116907386 MODEL JAAIVD010000027;XM_032910339 XP_032766230 protein-coding 626036656 Galm galactose mutarotase ENCODES a protein that exhibits aldose 1-epimerase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); galactose catabolic process via UDP-galactose, Leloir pathway (ortholog); galactose metabolic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH galactosemia 4 (ortholog); genetic disease (ortholog) 7 12894462 12946065 - 22301074;30032202 116905858 MODEL JAAIVD010000026;XM_032908840 XP_032764731 aldose 1-epimerase protein-coding 626036667 Adipoq adiponectin, C1Q and collagen domain containing ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); brown fat cell differentiation (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adiponectin signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amyloidosis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); extracellular region (ortholog) 4 7942802 7945933 + 22301074 116897818 MODEL JAAIVD010000003;XM_032899235 XP_032755126 adiponectin protein-coding 626036673 LOC116900238 putative olfactory receptor 5AK3 5 62761660 62762604 - 22301074;30032202 116900238 MODEL JAAIVD010000023;XM_032901988 XP_032757879 protein-coding 626036676 Acadl acyl-CoA dehydrogenase long chain ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); long-chain fatty acyl-CoA dehydrogenase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN carnitine catabolic process (ortholog); carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); Long-Chain 3-hydroxyacyl-CoA Dehydrogenase Deficiency (ortholog); very long chain acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 4 139995245 140033002 + 22301074;30032202 116899466 MODEL JAAIVD010000003;XM_032901264 XP_032757155 long-chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 626036691 LOC116893424 zinc finger and SCAN domain containing protein 4C-like 2 175109940 175119820 - 30032202 116893424 MODEL JAAIVD010000001;XM_032895202 XP_032751093 protein-coding 626036696 Mapk12 mitogen-activated protein kinase 12 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); MAP kinase activity (ortholog); INVOLVED IN MAPK cascade (ortholog); myoblast differentiation (ortholog); negative regulation of cell cycle (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog) 1 258434314 258443900 - 22301074;30032202 116914998 MODEL JAAIVD010000025;XM_032919402 XP_032775293 protein-coding 626036712 LOC116893398 ras-related protein Rab-12-like 2 170565318 170570240 - 116893398 MODEL JAAIVD010000001 pseudo 626036713 Map3k3 mitogen-activated protein kinase kinase kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN blood vessel development (ortholog); intracellular signal transduction (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; Erk5 MAPK signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH Cerebral Cavernous Malformation 5 (ortholog); Esophageal Neoplasms (ortholog); verrucous keratotic hemangioma (ortholog) 9 72961501 73029339 - 22301074 116910436 MODEL JAAIVD010000002;XM_032914281 XP_032770172 protein-coding 626036733 Ahsp alpha hemoglobin stabilizing protein INVOLVED IN erythrocyte differentiation (ortholog); protein folding (ortholog); protein stabilization (ortholog); ASSOCIATED WITH cerebral infarction (ortholog); coronary restenosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog) 2 73633852 73639358 - 22301074;30032202 116891438 MODEL JAAIVD010000001;XM_032892499 XP_032748390 alpha-hemoglobin-stabilizing protein protein-coding 626036740 Trim10 tripartite motif containing 10 INVOLVED IN erythrocyte differentiation (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); ASSOCIATED WITH irritant dermatitis (ortholog); FOUND IN cytoplasm (ortholog) 18 9839955 9847812 + 22301074 116887615 MODEL JAAIVD010000013;XM_032889222 XP_032745113 tripartite motif-containing protein 10 protein-coding 626036748 LOC116888932 cytokine receptor-like factor 2 X 392330 395274 + 116888932 MODEL JAAIVD010000014 pseudo 626036749 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41784265 41784346 - 116884162 MODEL JAAIVD010000009 trna 626036750 LOC116893901 uncharacterized LOC116893901 2 74908961 74910802 - 116893901 MODEL JAAIVD010000001;XR_004387010 ncrna 626036755 Tnfrsf14 TNF receptor superfamily member 14 ENCODES a protein that exhibits cytokine binding (ortholog); receptor ligand activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); negative regulation of adaptive immune memory response (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Brain Injuries (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 1 5787418 5794726 + 22301074;30032202 116892069 MODEL JAAIVD010000025;XM_032893543 XP_032749434 tumor necrosis factor receptor superfamily member 14 protein-coding 626036768 Tenm2 teneurin transmembrane protein 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN retrograde trans-synaptic signaling by trans-synaptic protein complex (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); substance-related disorder (ortholog); FOUND IN cell-cell junction (ortholog); dendritic spine (ortholog); extrinsic component of postsynaptic membrane (ortholog) 9 19196203 20131640 - 22301074;30032202 116908682 MODEL JAAIVD010000002;XM_032911992;XM_032911993;XM_032911994 XP_032767883;XP_032767884;XP_032767885 teneurin-2 protein-coding 626036804 LOC116911849 small Cajal body-specific RNA 3 10 38653871 38654010 + 116911849 MODEL JAAIVD010000005;XR_004389373 ncrna 626036807 Alad aminolevulinate dehydratase ENCODES a protein that exhibits identical protein binding (ortholog); porphobilinogen synthase activity (ortholog); proteasome core complex binding (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lead ion (ortholog); heme A biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); ALAD-Deficiency Porphyria (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog) 1 91013510 91023685 + 22301074;30032202 116901368 MODEL JAAIVD010000025;XM_032903234 XP_032759125 delta-aminolevulinic acid dehydratase protein-coding 626036823 Gatad1 GATA zinc finger domain containing 1 INVOLVED IN chromatin remodeling (ortholog); ASSOCIATED WITH dilated cardiomyopathy 2B (ortholog); Heimler syndrome 1 (ortholog); hypertrophic cardiomyopathy 2 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 135915468 135925710 - 22301074;30032202 116904116 MODEL JAAIVD010000024;XM_032906997;XM_032906999 XP_032762888;XP_032762890 GATA zinc finger domain-containing protein 1 protein-coding 626036835 LOC116899582 uncharacterized LOC116899582 4 157795880 157797395 + 116899582 MODEL JAAIVD010000003;XR_004387736 ncrna 626036839 Ttc6 tetratricopeptide repeat domain 6 ASSOCIATED WITH Meckel syndrome (ortholog) 7 70942339 71150245 + 22301074 116905073 MODEL JAAIVD010000026;XM_032907781 XP_032763672 tetratricopeptide repeat protein 6 protein-coding 626036875 LOC116890340 U6 spliceosomal RNA 1 25412882 25412988 - 116890340 MODEL JAAIVD010000025;XR_004386562 snrna 626036878 LOC116909238 uncharacterized LOC116909238 9 87388208 87391276 - 116909238 MODEL JAAIVD010000002;XR_004389060 ncrna 626036883 Rnf20 ring finger protein 20 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2B C-terminal K residue ubiquitin ligase activity (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH acute biphenotypic leukemia (ortholog); Arsenic Poisoning (ortholog); breast cancer (ortholog); FOUND IN HULC complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 7 57240949 57266225 - 22301074;30032202 116904997 MODEL JAAIVD010000026;XM_032907681 XP_032763572 E3 ubiquitin-protein ligase BRE1A protein-coding 626036908 Stau1 staufen double-stranded RNA binding protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); protein phosphatase 1 binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); dendritic transport of messenger ribonucleoprotein complex (ortholog); intracellular mRNA localization (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); myotonic disease (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 5 150978325 151024992 + 116902320 MODEL JAAIVD010000023;XM_032904768;XM_032904769;XM_032904770;XM_032904771 XP_032760659;XP_032760660;XP_032760661;XP_032760662 double-stranded RNA-binding protein Staufen homolog 1 protein-coding 626036934 LOC116885654 uncharacterized LOC116885654 16 19028445 19029517 + 116885654 MODEL JAAIVD010000004;XR_004386031;XR_004386032;XR_004386033 ncrna 626036946 LOC116907453 ferritin light chain 1-like 8 111741832 111742383 - 116907453 MODEL JAAIVD010000027 pseudo 626036947 LOC116894973 small nucleolar RNA SNORA24 2 200996621 200996750 + 116894973 MODEL JAAIVD010000001;XR_004387164 snorna 626036950 Higd2a HIG1 hypoxia inducible domain family member 2A INVOLVED IN mitochondrial respirasome assembly (ortholog); negative regulation of apoptotic process (ortholog); response to quercetin (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 14 72931717 72932668 + 30032202 116883667 MODEL JAAIVD010000009;XM_032884864 XP_032740755 HIG1 domain family member 2A, mitochondrial protein-coding 626036956 LOC116889802 gamma-aminobutyric acid receptor-associated protein-like 116889802 MODEL JAAIVD010000632 pseudo 626036957 Cops2 COP9 signalosome subunit 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN inner cell mass cell proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 5 104162573 104188033 - 22301074;30032202 116901911 MODEL JAAIVD010000023;XM_032904127;XM_032904128 XP_032760018;XP_032760019 COP9 signalosome complex subunit 2 protein-coding 626036978 LOC116888011 mRNA export factor-like X 79287386 79288461 + 116888011 MODEL JAAIVD010000014 pseudo 626036979 LOC116898329 ESX-1 secretion-associated protein EspK-like 4 42503146 42588502 - 116898329 MODEL JAAIVD010000003;XM_032899660 XP_032755551 protein-coding 626036985 LOC116899751 U6 spliceosomal RNA 4 104994615 104994721 + 116899751 MODEL JAAIVD010000003;XR_004387766 snrna 626036988 Nyx nyctalopin INVOLVED IN visual perception (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1A (ortholog); congenital stationary night blindness 1C (ortholog); FOUND IN dendrite (ortholog); postsynapse (ortholog) X 20463592 20465675 + 22301074;30032202 116889044 MODEL JAAIVD010000014;XM_032890237 XP_032746128 protein-coding 626036992 Cfap61 cilia and flagella associated protein 61 INVOLVED IN flagellated sperm motility (ortholog); sperm flagellum assembly (ortholog); spermatid nucleus elongation (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 84 (ortholog); FOUND IN axoneme (ortholog); radial spoke stalk (ortholog); sperm flagellum (ortholog) 5 125578003 125838692 + 116902061 MODEL JAAIVD010000023;XM_032904350 XP_032760241 cilia- and flagella-associated protein 61 protein-coding 626037021 Lhpp phospholysine phosphohistidine inorganic pyrophosphate phosphatase ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleus (ortholog) 2 69139607 69228538 - 22301074;30032202 116891395 MODEL JAAIVD010000001;XM_032892419 XP_032748310 protein-coding 626037032 LOC116887961 fibronectin type III domain containing protein 3C1-like X 65796686 65813798 - 22301074 116887961 MODEL JAAIVD010000014;XM_032889407 XP_032745298 protein-coding 626037054 LOC116903509 uncharacterized LOC116903509 1 133952396 133954396 + 116903509 MODEL JAAIVD010000025;XR_004388281 ncrna 626037058 LOC116889035 uncharacterized LOC116889035 X 19732364 19734724 - 30032202 116889035 MODEL JAAIVD010000014;XM_032890232 XP_032746123 uncharacterized protein LOC116889035 protein-coding 626037062 Igbp1 immunoglobulin binding protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); mitogen-activated protein kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of apoptotic signaling pathway (ortholog); negative regulation of stress-activated MAPK cascade (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); corpus callosum agenesis-intellectual disability-coloboma-micrognathia syndrome (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog) X 58242118 58264566 + 22301074;30032202 116888452 MODEL JAAIVD010000014;XM_032889731 XP_032745622 immunoglobulin-binding protein 1 protein-coding 626037072 Oaz1 ornithine decarboxylase antizyme 1 ENCODES a protein that exhibits enzyme binding (ortholog); ornithine decarboxylase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); cellular response to oxygen-glucose deprivation (ortholog); cellular response to polyamine macromolecule (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH brain ischemia (ortholog); Coronary Disease (ortholog); coronary restenosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 154055404 154057875 - 22301074;30032202 116904806 MODEL JAAIVD010000025;XM_032907449 XP_032763340 protein-coding 626037081 Sh3bp2 SH3 domain binding protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); SH3 domain binding (ortholog); ASSOCIATED WITH cherubism (ortholog); cherubism 1 (ortholog); genetic disease (ortholog) 11 70491213 70510907 - 30032202 116912500 MODEL JAAIVD010000006;XM_032916583;XM_032916584 XP_032772474;XP_032772475 SH3 domain-binding protein 2 protein-coding 626037100 LOC116906347 small nucleolar RNA SNORA62/SNORA6 family 7 8411353 8411508 - 116906347 MODEL JAAIVD010000026;XR_004388627 snorna 626037103 Rprd1a regulation of nuclear pre-mRNA domain containing 1A ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN RNA polymerase II promoter clearance (ortholog); FOUND IN nucleus (ortholog); transcription preinitiation complex (ortholog) 15 19313696 19363434 + 22301074;30032202 116884245 MODEL JAAIVD010000010;XM_032885328;XM_032885329 XP_032741219;XP_032741220 regulation of nuclear pre-mRNA domain-containing protein 1A protein-coding 626037121 LOC116901010 rhotekin-like 5 114446625 114449946 - 116901010 MODEL JAAIVD010000023 pseudo 626037122 Rdh8 retinol dehydrogenase 8 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway 8 17082016 17088215 + 22301074 116908318 MODEL JAAIVD010000027;XM_032911605 XP_032767496 protein-coding 626037131 Clstn1 calsyntenin 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); kinesin binding (ortholog); X11-like protein binding (ortholog); INVOLVED IN neurotransmitter receptor transport to postsynaptic membrane (ortholog); positive regulation of synapse assembly (ortholog); positive regulation of synaptic transmission (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); GABA-ergic synapse (ortholog) 1 11119963 11184760 - 22301074;30032202 116892590 MODEL JAAIVD010000025;XM_032894372 XP_032750263 calsyntenin-1 protein-coding 626037154 Trpc4 transient receptor potential cation channel subfamily C member 4 ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); calcium channel activity (ortholog); INVOLVED IN calcium ion import (ortholog); calcium ion transport (ortholog); gamma-aminobutyric acid secretion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); lung cancer (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); calcium channel complex (ortholog); caveola (ortholog) 3 100101101 100256387 - 22301074;30032202 116896875 MODEL JAAIVD010000012;XM_032898421 XP_032754312 short transient receptor potential channel 4 protein-coding 626037170 LOC116890567 U1 spliceosomal RNA 1 190987587 190987746 + 116890567 MODEL JAAIVD010000025;XR_004386737 snrna 626037173 Batf2 basic leucine zipper ATF-like transcription factor 2 INVOLVED IN defense response to protozoan (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); melanoma (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 2 1512977 1520743 - 30032202 116893595 MODEL JAAIVD010000001;XM_032895295;XM_032895296;XM_032895297;XM_032895298 XP_032751186;XP_032751187;XP_032751188;XP_032751189 basic leucine zipper transcriptional factor ATF-like 2 protein-coding 626037186 Lalba lactalbumin alpha ENCODES a protein that exhibits lactose synthase activity (ortholog); INVOLVED IN lactose biosynthetic process (ortholog); PARTICIPATES IN Glut1 deficiency syndrome pathway; lactose biosynthetic pathway; ASSOCIATED WITH colon cancer (ortholog); gastroenteritis (ortholog); FOUND IN protein-containing complex (ortholog) 1 271295927 271298391 - 22301074 116890241 MODEL JAAIVD010000025;XM_032890969 XP_032746860 alpha-lactalbumin protein-coding 626037194 LOC116900182 dynein light chain roadblock-type 1-like 5 37097260 37097550 - 116900182 MODEL JAAIVD010000023 pseudo 626037195 LOC116914119 small nucleolar RNA SNORA17 12 34363666 34363797 + 116914119 MODEL JAAIVD010000007;XR_004389683 snorna 626037198 LOC116906316 U6 spliceosomal RNA 7 42026088 42026193 + 116906316 MODEL JAAIVD010000026;XR_004388604 snrna 626037201 Slc7a2 solute carrier family 7 member 2 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); high-affinity L-arginine transmembrane transporter activity (ortholog); high-affinity L-ornithine transmembrane transporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); establishment of localization in cell (ortholog); L-alpha-amino acid transmembrane transport (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); myoepithelioma (ortholog); FOUND IN cell junction (ortholog); membrane (ortholog); plasma membrane (ortholog) 13 46638199 46691950 - 22301074;30032202 116914517 MODEL JAAIVD010000008;XM_032918848;XM_032918849 XP_032774739;XP_032774740 cationic amino acid transporter 2 protein-coding 626037221 Ccdc116 coiled-coil domain containing 116 ASSOCIATED WITH lung cancer (ortholog); FOUND IN centrosome (ortholog) 4 2427290 2431252 - 30032202 116897772 MODEL JAAIVD010000003;XM_032899202 XP_032755093 coiled-coil domain-containing protein 116 protein-coding 626037228 Timeless timeless circadian regulator ENCODES a protein that exhibits enzyme activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cell cycle phase transition (ortholog); ASSOCIATED WITH advanced sleep phase syndrome 4 (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 155703674 155722672 + 30032202 116905947 MODEL JAAIVD010000025;XM_032908946 XP_032764837 protein timeless homolog protein-coding 626037261 LOC116889984 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2, mitochondrial-like 1 172881844 172882141 + 116889984 MODEL JAAIVD010000025 pseudo 626037262 Znf839 zinc finger protein 839 7 128418734 128434462 + 116905481 MODEL JAAIVD010000026;XM_032908477;XM_032908478;XM_032908479 XP_032764368;XP_032764369;XP_032764370 protein-coding 626037278 Mboat1 membrane bound glycerophospholipid O-acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerophosphoethanolamine O-acyltransferase activity (ortholog); 1-acylglycerophosphoserine O-acyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine acyl-chain remodeling (ortholog); phosphatidylserine acyl-chain remodeling (ortholog); phospholipid biosynthetic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 14 49173929 49280356 + 30032202 116883410 MODEL JAAIVD010000009;XM_032884535 XP_032740426 lysophospholipid acyltransferase 1;membrane bound O-acyltransferase domain containing 1 protein-coding 626037295 Depdc1 DEP domain containing 1 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Hirschsprung's disease (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) 3 2064887 2095485 + 30032202 116896119 MODEL JAAIVD010000012;XM_032897083 XP_032752974 DEP domain-containing protein 1A protein-coding 626037310 Wdr3 WD repeat domain 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH papillary thyroid carcinoma (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 57922568 57945189 + 22301074;30032202 116896471 MODEL JAAIVD010000012;XM_032897633 XP_032753524 WD repeat-containing protein 3 protein-coding 626037341 Cwf19l2 CWF19 like cell cycle control factor 2 7 166722 224916 - 30032202 116905726 MODEL JAAIVD010000026;XM_032908694 XP_032764585 CWF19-like protein 2 protein-coding 626037363 Ppp2r3a protein phosphatase 2 regulatory subunit B''alpha ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN eye photoreceptor cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN protein phosphatase type 2A complex (ortholog) 8 92469235 92564500 - 22301074;30032202 116907252 MODEL JAAIVD010000027;XM_032910210;XM_032910211 XP_032766101;XP_032766102 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha protein-coding 626037383 LOC116905154 pecanex-like protein 4 7 86601097 86641404 + 22301074 116905154 MODEL JAAIVD010000026;XM_032907925;XM_032907926 XP_032763816;XP_032763817 protein-coding 626037401 LOC116893151 formyl peptide receptor 2-like 2 100651532 100652600 - 116893151 MODEL JAAIVD010000001 pseudo 626037402 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41717803 41717874 - 116884161 MODEL JAAIVD010000009 trna 626037403 Grid2 glutamate ionotropic receptor delta type subunit 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN cerebellar granule cell differentiation (ortholog); excitatory postsynaptic potential (ortholog); excitatory synapse assembly (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 18 (ortholog); genetic disease (ortholog); GRID2-related spinocerebellar ataxia (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); ionotropic glutamate receptor complex (ortholog) 6 77963479 79395135 - 22301074;30032202 116903719 MODEL JAAIVD010000024;XM_032906394;XM_032906395 XP_032762285;XP_032762286 glutamate receptor ionotropic, delta-2 protein-coding 626037426 LOC116900114 40S ribosomal protein S16-like 5 13927991 13928446 - 22301074;30032202 116900114 MODEL JAAIVD010000023;XM_032901890;XM_032901891 XP_032757781;XP_032757782 protein-coding 626037433 Megf10 multiple EGF like domains 10 ENCODES a protein that exhibits complement component C1q complex binding (ortholog); Notch binding (ortholog); scavenger receptor activity (ortholog); INVOLVED IN apoptotic process involved in development (ortholog); engulfment of apoptotic cell (ortholog); homotypic cell-cell adhesion (ortholog); ASSOCIATED WITH congenital myopathy 10B (ortholog); Deglutition Disorders (ortholog); early-onset myopathy-areflexia-respiratory distress-dysphagia syndrome (ortholog); FOUND IN phagocytic cup (ortholog); plasma membrane (ortholog) 15 74554584 74705215 - 22301074;30032202 116884260 MODEL JAAIVD010000010;XM_032885345 XP_032741236 multiple epidermal growth factor-like domains protein 10 protein-coding 626037462 Plch2 phospholipase C eta 2 ENCODES a protein that exhibits phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); phospholipase C activity (ortholog); INVOLVED IN phosphatidylinositol metabolic process (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 5656419 5737662 + 22301074;30032202 116892049 MODEL JAAIVD010000025;XM_032893524 XP_032749415 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase eta-2 protein-coding 626037489 Lcmt2 leucine carboxyl methyltransferase 2 5 99283763 99286008 - 22301074;30032202 116901851 MODEL JAAIVD010000023;XM_032904042 XP_032759933 tRNA wybutosine-synthesizing protein 4 protein-coding 626037494 LOC116890076 olfactory receptor 6C2-like 1 215160730 215161671 - 22301074;30032202 116890076 MODEL JAAIVD010000025;XM_032890839 XP_032746730 protein-coding 626037498 Thap3 THAP domain containing 3 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 8752279 8757916 + 116892413 MODEL JAAIVD010000025;XM_032894096 XP_032749987 THAP domain-containing protein 3 protein-coding 626037506 LOC116909090 uncharacterized LOC116909090 9 64081125 64083260 + 116909090 MODEL JAAIVD010000002;XR_004389049 ncrna 626037510 LOC116892100 serum amyloid A-5 protein-like 2 152626518 152640502 + 22301074 116892100 MODEL JAAIVD010000001;XM_032893577 XP_032749468 protein-coding 626037518 LOC116889221 post-GPI attachment to proteins factor 2-like X 48534155 48535274 - 116889221 MODEL JAAIVD010000014 pseudo 626037519 Snx10 sorting nexin 10 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); ATPase binding (ortholog); INVOLVED IN bone mineralization involved in bone maturation (ortholog); bone remodeling (ortholog); bone resorption (ortholog); ASSOCIATED WITH autosomal recessive osteopetrosis 8 (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN apical cytoplasm (ortholog); centrosome (ortholog); endoplasmic reticulum (ortholog) 6 89501564 89546095 - 22301074;30032202 116903814 MODEL JAAIVD010000024;XM_032906518 XP_032762409 sorting nexin-10 protein-coding 626037530 Hhipl1 HHIP like 1 INVOLVED IN artery development (ortholog); cell migration (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); prostate cancer (ortholog); FOUND IN extracellular region (ortholog) 7 125981248 126002782 + 22301074 116905448 MODEL JAAIVD010000026;XM_032908398 XP_032764289 HHIP-like protein 1 protein-coding 626037542 Jakmip1 janus kinase and microtubule interacting protein 1 ENCODES a protein that exhibits GABA receptor binding (ortholog); kinesin binding (ortholog); RNA binding (ortholog); INVOLVED IN cognition (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); intellectual disability (ortholog); FOUND IN membrane (ortholog); microtubule cytoskeleton (ortholog); ribonucleoprotein complex (ortholog) 11 68023440 68119358 - 30032202 116912829 MODEL JAAIVD010000006;XM_032917018 XP_032772909 janus kinase and microtubule-interacting protein 1 protein-coding 626037559 LOC116911864 U2 spliceosomal RNA 10 63505845 63505971 - 116911864 MODEL JAAIVD010000005 pseudo 626037560 LOC116911889 U6 spliceosomal RNA 10 27360141 27360239 - 116911889 MODEL JAAIVD010000005 pseudo 626037561 LOC116888968 uncharacterized LOC116888968 X 8174511 8177990 - 116888968 MODEL JAAIVD010000014 pseudo 626037562 Ino80e INO80 complex subunit E INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 75033899 75044620 + 30032202 116891502 MODEL JAAIVD010000001;XM_032892630;XM_032892631;XM_032892632;XM_032892633 XP_032748521;XP_032748522;XP_032748523;XP_032748524 protein-coding 626037586 LOC116889092 40S ribosomal protein S20-like 1 118386203 118386563 + 116889092 MODEL JAAIVD010000025 pseudo 626037587 Shisa8 shisa family member 8 1 251937034 251942099 - 30032202 116914231 MODEL JAAIVD010000025;XM_032918429 XP_032774320 protein shisa-8 protein-coding 626037595 Coq10b coenzyme Q10B FOUND IN mitochondrion (ortholog) 4 129508542 129524365 + 22301074;30032202 116899389 MODEL JAAIVD010000003;XM_032901110 XP_032757001 coenzyme Q-binding protein COQ10 homolog B, mitochondrial protein-coding 626037604 LOC116889822 oogenesin-3-like 116889822 MODEL JAAIVD010001265 pseudo 626037605 Hoxc10 homeobox C10 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); negative regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH Kyphoscoliosis (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 1 260110982 260116189 - 22301074;30032202 116890188 MODEL JAAIVD010000025;XM_032890924 XP_032746815 homeobox protein Hox-C10 protein-coding 626037610 Map3k1 mitogen-activated protein kinase kinase kinase 1 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); JUN kinase binding (ortholog); JUN kinase kinase kinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); camera-type eye development (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; altered Wnt signaling, canonical pathway; c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH 46,XY sex reversal 6 (ortholog); breast cancer (ortholog); Breast Neoplasms (ortholog); FOUND IN filamentous actin (ortholog); tight junction (ortholog) 3 185235931 185301022 + 22301074;30032202 116897195 MODEL JAAIVD010000012;XM_032898897 XP_032754788 protein-coding 626037633 Cdc37 cell division cycle 37, HSP90 cochaperone ENCODES a protein that exhibits heat shock protein binding (ortholog); Hsp90 protein binding (ortholog); kinase binding (ortholog); INVOLVED IN positive regulation of type 2 mitophagy (ortholog); post-transcriptional regulation of gene expression (ortholog); regulation of type I interferon-mediated signaling pathway (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); HSP90-CDC37 chaperone complex (ortholog) 8 17403200 17416064 - 22301074;30032202 116906992 MODEL JAAIVD010000027;XM_032909919 XP_032765810 hsp90 co-chaperone Cdc37 protein-coding 626037645 LOC116909019 eotaxin 9 88408489 88412457 - 22301074;30032202 116909019 MODEL JAAIVD010000002;XM_032912495 XP_032768386 protein-coding 626037650 LOC116883747 ATP synthase subunit f, mitochondrial-like 14 49767161 49767611 + 116883747 MODEL JAAIVD010000009 pseudo 626037651 LOC116894125 olfactory receptor 52N2-like 2 103859445 103860410 - 22301074 116894125 MODEL JAAIVD010000001;XM_032895842 XP_032751733 protein-coding 626037654 LOC116894992 small nucleolar RNA SNORA32 2 12026867 12026988 + 116894992 MODEL JAAIVD010000001;XR_004387183 snorna 626037657 C12H13orf42 chromosome 12 C13orf42 homolog 12 61926318 61947387 + 116913380 MODEL JAAIVD010000007;XM_032917554 XP_032773445 uncharacterized protein C13orf42 homolog protein-coding 626037664 Gcc2 GRIP and coiled-coil domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN Golgi ribbon formation (ortholog); Golgi to plasma membrane protein transport (ortholog); late endosome to Golgi transport (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) 18 24390342 24441103 + 30032202 116886891 MODEL JAAIVD010000013;XM_032888347;XM_032888348 XP_032744238;XP_032744239 GRIP and coiled-coil domain-containing protein 2 protein-coding 626037694 LOC116890440 small nucleolar RNA SNORA70 1 57951154 57951289 - 116890440 MODEL JAAIVD010000025;XR_004386636 snorna 626037697 LOC116889145 palmitoyltransferase ZDHHC16-like X 1635605 1636681 + 116889145 MODEL JAAIVD010000014 pseudo 626037698 LOC116903786 taste receptor type 2 member 105 6 16645453 16646403 + 22301074;30032202 116903786 MODEL JAAIVD010000024;XM_032906480 XP_032762371 protein-coding 626037701 LOC116895896 60S ribosomal protein L7a-like 3 116386785 116391387 + 116895896 MODEL JAAIVD010000012 pseudo 626037702 LOC116890130 septin-7-like 1 258896975 258935567 - 116890130 MODEL JAAIVD010000025 pseudo 626037703 Repin1 replication initiator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of D-glucose import (ortholog); regulation of fatty acid transport (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); lipid droplet (ortholog) 6 92367836 92373088 - 30032202 116903853 MODEL JAAIVD010000024;XM_032906589;XM_032906590;XM_032906591;XM_032906592;XM_032906593 XP_032762480;XP_032762481;XP_032762482;XP_032762483;XP_032762484 protein-coding 626037719 LOC116906136 zinc finger protein 431-like 1 153214204 153238207 - 22301074;30032202 116906136 MODEL JAAIVD010000025;XM_032909148 XP_032765039 protein-coding 626037726 LOC116895618 60S ribosomal protein L17-like 3 169879338 169879894 + 116895618 MODEL JAAIVD010000012 pseudo 626037727 Tbc1d8 TBC1 domain family member 8 INVOLVED IN regulation of cilium assembly (ortholog) 4 115613511 115721112 - 22301074 116899317 MODEL JAAIVD010000003;XM_032900984;XM_032900985 XP_032756875;XP_032756876 protein-coding 626037753 LOC116883771 uncharacterized LOC116883771 14 69768356 69772977 - 116883771 MODEL JAAIVD010000009;XR_004385785 ncrna 626037757 LOC116897651 U2 spliceosomal RNA 3 124005777 124005884 - 116897651 MODEL JAAIVD010000012 pseudo 626037758 Gas2l1 growth arrest specific 2 like 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); microtubule bundle formation (ortholog); negative regulation of microtubule depolymerization (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); microtubule (ortholog) 11 74036890 74043022 - 22301074;30032202 116912263 MODEL JAAIVD010000006;XM_032916251 XP_032772142 GAS2-like protein 1 protein-coding 626037768 Chrnd cholinergic receptor nicotinic delta subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN monoatomic cation transport (ortholog); musculoskeletal movement (ortholog); regulation of membrane potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH centronuclear myopathy (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 3A (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 4 159318331 159326411 + 22301074;30032202 116898255 MODEL JAAIVD010000003;XM_032899604;XM_032899605;XM_032899606;XM_032899608 XP_032755495;XP_032755496;XP_032755497;XP_032755499 acetylcholine receptor subunit delta protein-coding 626037788 LOC116905924 uncharacterized LOC116905924 7 130180391 130181380 - 116905924 MODEL JAAIVD010000026;XR_004388579 ncrna 626037793 LOC116896109 choline-phosphate cytidylyltransferase A-like 3 951727 952770 + 116896109 MODEL JAAIVD010000012 pseudo 626037794 LOC116891295 acylcarnitine hydrolase 2 54776611 54784188 - 30032202 116891295 MODEL JAAIVD010000001;XM_032892205 XP_032748096 protein-coding 626037810 Fancd2os FANCD2 opposite strand ASSOCIATED WITH Fanconi anemia (ortholog); hereditary breast ovarian cancer syndrome (ortholog) 6 32936860 32943277 + 116903404 MODEL JAAIVD010000024;XM_032905916;XM_032905917 XP_032761807;XP_032761808 FANCD2 opposite strand protein protein-coding 626037822 Plekhg5 pleckstrin homology and RhoGEF domain containing G5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN endothelial cell chemotaxis (ortholog); endothelial cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); autosomal recessive distal hereditary motor neuronopathy 4 (ortholog); Charcot-Marie-Tooth disease recessive intermediate C (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) 1 8627017 8655982 - 22301074;30032202 116892340 MODEL JAAIVD010000025;XM_032893984;XM_032893990 XP_032749875;XP_032749881 pleckstrin homology domain-containing family G member 5 protein-coding 626037852 Jam2 junctional adhesion molecule 2 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cellular extravasation (ortholog); hematopoietic stem cell migration to bone marrow (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cell-cell contact zone (ortholog) 4 57435109 57487525 - 30032202 116899038 MODEL JAAIVD010000003;XM_032900503 XP_032756394 junctional adhesion molecule B protein-coding 626037866 LOC116883490 prolactin-3D4 14 46200050 46206187 - 22301074;30032202 116883490 MODEL JAAIVD010000009;XM_032884647;XM_032884648 XP_032740538;XP_032740539 protein-coding 626037879 LOC116900139 olfactory receptor 1361-like 5 14643112 14644104 - 22301074 116900139 MODEL JAAIVD010000023;XM_032901913 XP_032757804 protein-coding 626037882 Lat2 linker for activation of T cells family member 2 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Disease Progression (ortholog); Experimental Leukemia (ortholog); FOUND IN membrane raft (ortholog); plasma membrane (ortholog) 16 19450601 19457376 + 22301074;30032202 116885748 MODEL JAAIVD010000004;XM_032887059;XM_032887060 XP_032742950;XP_032742951 linker for activation of T-cells family member 2 protein-coding 626037897 Resf1 retroelement silencing factor 1 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN response to bacterium (ortholog); transposable element silencing by heterochromatin formation (ortholog); FOUND IN nucleus (ortholog) 6 6986830 7013659 + 30032202 116903118 MODEL JAAIVD010000024;XM_032905455;XM_032905456;XM_032905457;XM_032905458;XM_032905459;XM_032905460;XM_032905462;XR_004388252 XP_032761346;XP_032761347;XP_032761348;XP_032761349;XP_032761350;XP_032761351;XP_032761353 protein-coding 626037926 St8sia1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN cellular response to heat (ortholog); positive regulation of epithelial cell proliferation (ortholog); ASSOCIATED WITH liver disease (ortholog); toxic encephalopathy (ortholog) 6 596739 725945 - 22301074;30032202 116903071 MODEL JAAIVD010000024;XM_032905371 XP_032761262 alpha-N-acetylneuraminide alpha-2,8-sialyltransferase protein-coding 626037935 Cx3cr1 C-X3-C motif chemokine receptor 1 ENCODES a protein that exhibits C-X3-C chemokine binding (ortholog); C-X3-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH age related macular degeneration 12 (ortholog); anti-basement membrane glomerulonephritis (ortholog); arteriosclerosis (ortholog); FOUND IN cell surface (ortholog); dendritic tree (ortholog); neuronal cell body membrane (ortholog) 8 111295087 111309440 - 22301074;30032202 116906924 MODEL JAAIVD010000027;XM_032909850;XM_032909851 XP_032765741;XP_032765742 CX3C chemokine receptor 1 protein-coding 626037944 Lag3 lymphocyte activating 3 ENCODES a protein that exhibits MHC class II protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of regulatory T cell differentiation (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog) 6 22975811 22984277 + 30032202 116904588 MODEL JAAIVD010000024;XM_032907384 XP_032763275 lymphocyte activation gene 3 protein protein-coding 626037956 D2hgdh D-2-hydroxyglutarate dehydrogenase ENCODES a protein that exhibits (R)-2-hydroxyglutarate dehydrogenase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN lactate metabolic process (ortholog); malate metabolic process (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); amino acid metabolic disorder (ortholog); D-2-hydroxyglutaric aciduria (ortholog); FOUND IN mitochondrion (ortholog) 4 165739005 165757957 + 22301074;30032202 116899676 MODEL JAAIVD010000003;XM_032901693;XM_032901694 XP_032757584;XP_032757585 D-2-hydroxyglutarate dehydrogenase, mitochondrial protein-coding 626037974 LOC116905940 60S ribosomal protein L23a-like 7 98107052 98107517 - 116905940 MODEL JAAIVD010000026 pseudo 626037975 LOC116895909 TD and POZ domain-containing protein 5-like 3 120667466 120669139 - 116895909 MODEL JAAIVD010000012 pseudo 626037976 LOC116897645 U1 spliceosomal RNA 3 60808340 60808503 - 116897645 MODEL JAAIVD010000012;XR_004387621 snrna 626037979 Timm22 translocase of inner mitochondrial membrane 22 ENCODES a protein that exhibits protein transporter activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN carrier pathway of mitochondrial protein import; ASSOCIATED WITH combined oxidative phosphorylation deficiency 43 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM22 mitochondrial import inner membrane insertion complex (ortholog) 9 95113108 95121797 + 30032202 116908896 MODEL JAAIVD010000002;XM_032912350 XP_032768241 mitochondrial import inner membrane translocase subunit Tim22 protein-coding 626037987 Themis2 thymocyte selection associated family member 2 INVOLVED IN regulation of B cell activation (ortholog); T cell receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 25442585 25456837 + 30032202 116886850 MODEL JAAIVD010000025;XM_032888305 XP_032744196 protein THEMIS2 protein-coding 626037996 LOC116883217 lysophospholipid acyltransferase LPCAT4-like 14 47062766 47064159 + 116883217 MODEL JAAIVD010000009 pseudo 626037997 LOC116898280 olfactory receptor 12 4 164586911 164601097 + 22301074;30032202 116898280 MODEL JAAIVD010000003;XM_032899631 XP_032755522 protein-coding 626038003 LOC116908020 S phase cyclin A-associated protein in the endoplasmic reticulum-like 8 45970681 45982254 - 116908020 MODEL JAAIVD010000027;XM_032911281 XP_032767172 protein-coding 626038009 Mapk3 mitogen-activated protein kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); arachidonate metabolic process (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN ceramide signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN caveola (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 75131760 75138057 - 22301074;30032202 116891511 MODEL JAAIVD010000001;XM_032892645;XM_032892647 XP_032748536;XP_032748538 protein-coding 626038024 Gpr108 G protein-coupled receptor 108 INVOLVED IN defense response to virus (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); regulation of immune response (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); trans-Golgi network (ortholog) 4 88642653 88653273 - 22301074;30032202 116899216 MODEL JAAIVD010000003;XM_032900810;XM_032900811;XM_032900812 XP_032756701;XP_032756702;XP_032756703 protein GPR108 protein-coding 626038049 Plaur plasminogen activator, urokinase receptor ENCODES a protein that exhibits enzyme binding (ortholog); protein domain specific binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN epithelial cell differentiation involved in prostate gland development (ortholog); mesenchymal cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); autistic disorder (ortholog); Bacteremia (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); protein complex involved in cell-matrix adhesion (ortholog) 2 170237074 170252694 - 30032202 116892489 MODEL JAAIVD010000001;XM_032894224;XM_032894225 XP_032750115;XP_032750116 urokinase plasminogen activator surface receptor protein-coding 626038063 Ung uracil DNA glycosylase ENCODES a protein that exhibits damaged DNA binding (ortholog); ribosomal small subunit binding (ortholog); uracil DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair (ortholog); base-excision repair, AP site formation via deaminated base removal (ortholog); isotype switching (ortholog); ASSOCIATED WITH Bloom syndrome (ortholog); Colorectal Neoplasms (ortholog); dysgammaglobulinemia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 39829688 39838372 - 22301074;30032202 116885714 MODEL JAAIVD010000004;XM_032887022 XP_032742913 uracil-DNA glycosylase protein-coding 626038074 LOC116889915 olfactory receptor 6C3 1 160521582 160522517 + 22301074;30032202 116889915 MODEL JAAIVD010000025;XM_032890733 XP_032746624 protein-coding 626038077 Pdgfa platelet derived growth factor subunit A ENCODES a protein that exhibits collagen binding (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Animal Mammary Neoplasms (ortholog); Brain Injuries (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); microvillus (ortholog) 16 14208411 14228072 + 22301074;30032202 116885223 MODEL JAAIVD010000004;XM_032886458 XP_032742349 platelet-derived growth factor subunit A protein-coding 626038087 Acad11 acyl-CoA dehydrogenase family member 11 ENCODES a protein that exhibits long-chain fatty acyl-CoA dehydrogenase activity (ortholog); medium-chain fatty acyl-CoA dehydrogenase activity (ortholog); very-long-chain fatty acyl-CoA dehydrogenase activity (ortholog); INVOLVED IN fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); FOUND IN mitochondrial membrane (ortholog); nucleus (ortholog); peroxisome (ortholog) 8 95377817 95442966 + 22301074;30032202 116907421 MODEL JAAIVD010000027;XM_032910387 XP_032766278 protein-coding 626038111 Nkx2-3 NK2 homeobox 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); cell fate specification (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); ulcerative colitis (ortholog) 2 43130751 43134476 + 22301074;30032202 116893799 MODEL JAAIVD010000001;XM_032895504 XP_032751395 homeobox protein Nkx-2.3 protein-coding 626038117 LOC116899235 adhesion G protein-coupled receptor E4-like 4 92984567 93067288 - 22301074;30032202 116899235 MODEL JAAIVD010000003;XM_032900837 XP_032756728 protein-coding 626038134 Ppm1e protein phosphatase, Mg2+/Mn2+ dependent 1E ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to xenobiotic stimulus (ortholog); negative regulation of protein kinase activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 83407802 83544270 + 22301074;30032202 116908621 MODEL JAAIVD010000002;XM_032911868 XP_032767759 protein phosphatase 1E protein-coding 626038145 Dguok deoxyguanosine kinase ENCODES a protein that exhibits deoxyadenosine kinase activity (ortholog); deoxyguanosine kinase activity (ortholog); deoxynucleoside kinase activity (ortholog); INVOLVED IN dAMP salvage (ortholog); dGTP metabolic process (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 4 (ortholog); Cognitive Dysfunction (ortholog); Deoxyguanosine Kinase Deficiency (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 6 62716513 62744317 + 22301074;30032202 116903606 MODEL JAAIVD010000024;XM_032906247;XM_032906248;XM_032906249;XM_032906250;XM_032906251 XP_032762138;XP_032762139;XP_032762140;XP_032762141;XP_032762142 deoxyguanosine kinase, mitochondrial protein-coding 626038166 Rgs20 regulator of G protein signaling 20 INVOLVED IN response to amphetamine (ortholog); FOUND IN cytoplasm (ortholog); trans-Golgi network (ortholog) 1 140275819 140388971 - 116903726 MODEL JAAIVD010000025;XM_032906409;XM_032906417 XP_032762300;XP_032762308 regulator of G-protein signaling 20 protein-coding 626038180 LOC116912974 small nucleolar RNA SNORA17 11 832588 832719 + 116912974 MODEL JAAIVD010000006;XR_004389539 snorna 626038183 Zbtb32 zinc finger and BTB domain containing 32 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN hemopoiesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nuclear chromosome (ortholog); nucleus (ortholog) 2 165418922 165421303 + 22301074;30032202 116894458 MODEL JAAIVD010000001;XM_032896167;XM_032896168 XP_032752058;XP_032752059 zinc finger and BTB domain-containing protein 32 protein-coding 626038197 LOC116888575 uncharacterized LOC116888575 X 65135533 65172773 - 116888575 MODEL JAAIVD010000014;XR_004386323;XR_004386324;XR_004386325 ncrna 626038210 LOC116894551 60S ribosomal protein L7a-like 2 177744207 177745015 + 116894551 MODEL JAAIVD010000001 pseudo 626038211 Wdr73 WD repeat domain 73 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); nucleus organization (ortholog); ASSOCIATED WITH dystonia (ortholog); epilepsy (ortholog); Galloway-Mowat syndrome (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 119336219 119344395 + 22301074;30032202 116891910 MODEL JAAIVD010000001;XM_032893331 XP_032749222 WD repeat-containing protein 73 protein-coding 626038223 Trnar-ccg transfer RNA arginine (anticodon CCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 866853 866925 - 116910827 MODEL JAAIVD010000002 trna 626038224 LOC116894685 60S ribosomal protein L36a-like 2 211674750 211675115 - 116894685 MODEL JAAIVD010000001 pseudo 626038225 LOC116893421 vomeronasal type-1 receptor 1-like 2 174712877 174713748 + 116893421 MODEL JAAIVD010000001 pseudo 626038226 Frrs1l ferric chelate reductase 1 like ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN regulation of AMPA glutamate receptor clustering (ortholog); regulation of glutamate receptor signaling pathway (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH choreatic disease (ortholog); developmental and epileptic encephalopathy 37 (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); postsynapse (ortholog) 1 94631451 94659077 + 30032202 116901676 MODEL JAAIVD010000025;XM_032903793 XP_032759684 DOMON domain-containing protein FRRS1L protein-coding 626038235 Slc60a1 solute carrier family 60 member 1 ASSOCIATED WITH cholangiocarcinoma (ortholog) 10 3777274 3816524 + 22301074 116911741 MODEL JAAIVD010000005;XM_032915721;XM_032915722 XP_032771612;XP_032771613 Mfsd4a major facilitator superfamily domain containing 4A;major facilitator superfamily domain-containing protein 4A protein-coding 626038254 Rnf175 ring finger protein 175 3 69738561 69784128 - 30032202 116895811 MODEL JAAIVD010000012;XM_032896948 XP_032752839 protein-coding 626038266 LOC116912632 serine-rich adhesin for platelets-like 11 1017201 1024225 - 116912632 MODEL JAAIVD010000006;XM_032916749 XP_032772640 protein-coding 626038270 Alox12b arachidonate 12-lipoxygenase, 12R type ENCODES a protein that exhibits arachidonate 12(S)-lipoxygenase activity (ortholog); arachidonate 8(R)-lipoxygenase activity (ortholog); linoleate 9S-lipoxygenase activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 9 48758010 48769606 + 22301074;30032202 116909677 MODEL JAAIVD010000002;XM_032913335 XP_032769226 arachidonate 12-lipoxygenase, 12R-type protein-coding 626038289 LOC116894747 ATP-binding cassette sub-family A member 3-like 2 134766321 134804882 - 22301074;30032202 116894747 MODEL JAAIVD010000001;XM_032896422 XP_032752313 protein-coding 626038304 LOC116889391 melanoma antigen preferentially expressed in tumors-like X 87969543 87972216 - 30032202 116889391 MODEL JAAIVD010000014;XM_032890492 XP_032746383 protein-coding 626038309 Flot1 flotillin 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); protease binding (ortholog); INVOLVED IN adherens junction organization (ortholog); axonogenesis (ortholog); caveola assembly (ortholog); ASSOCIATED WITH Q fever (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 18 9036305 9046462 + 30032202 116887467 MODEL JAAIVD010000013;XM_032889075;XM_032889076 XP_032744966;XP_032744967 flotillin-1 protein-coding 626038329 Slirp SRA stem-loop interacting RNA binding protein ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); mitochondrial mRNA polyadenylation (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH mitochondrial encephalomyopathy (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) 7 101541770 101548477 + 30032202 116905327 MODEL JAAIVD010000026;XM_032908220 XP_032764111 SRA stem-loop-interacting RNA-binding protein, mitochondrial protein-coding 626038337 Cradd CARD and death domain containing adaptor protein ENCODES a protein that exhibits death domain binding (ortholog); protease binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); cellular response to mechanical stimulus (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); autosomal recessive intellectual developmental disorder 34 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); endopeptidase complex (ortholog); nucleus (ortholog) 1 174367004 174519228 - 22301074;30032202 116908367 MODEL JAAIVD010000025;XM_032911617;XM_032911618 XP_032767508;XP_032767509 CASP2 and RIPK1 domain containing adaptor with death domain;death domain-containing protein CRADD protein-coding 626038347 Togaram2 TOG array regulator of axonemal microtubules 2 ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Hearing Loss (ortholog) 7 21483870 21541050 - 30032202 116905955 MODEL JAAIVD010000026;XM_032908955 XP_032764846 TOG array regulator of axonemal microtubules protein 2 protein-coding 626038371 LOC116891323 40S ribosomal protein S19-like 2 58231803 58232232 + 116891323 MODEL JAAIVD010000001 pseudo 626038372 LOC116889138 60 kDa heat shock protein, mitochondrial-like X 74652505 74653492 + 116889138 MODEL JAAIVD010000014 pseudo 626038373 LOC116905962 high mobility group protein B1-like 7 22363866 22364482 + 116905962 MODEL JAAIVD010000026 pseudo 626038374 LOC116912585 PRAME family member 8-like 11 48491296 48494038 + 22301074;30032202 116912585 MODEL JAAIVD010000006;XM_032916698;XM_032916700;XM_032916701 XP_032772589;XP_032772591;XP_032772592 protein-coding 626038382 Atp8b4 ATPase phospholipid transporting 8B4 (putative) FOUND IN Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) 5 105157016 105349120 - 22301074;30032202 116900969 MODEL JAAIVD010000023;XM_032902598 XP_032758489 probable phospholipid-transporting ATPase IM protein-coding 626038411 Bpnt1 3'(2'), 5'-bisphosphate nucleotidase 1 ENCODES a protein that exhibits 3'(2'),5'-bisphosphate nucleotidase activity (ortholog); inositol-1,4-bisphosphate 1-phosphatase activity (ortholog); magnesium ion binding (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN mitochondrion (ortholog) 10 63478605 63506522 + 22301074;30032202 116911639 MODEL JAAIVD010000005;XM_032915595;XM_032915596;XM_032915597 XP_032771486;XP_032771487;XP_032771488 3'(2'),5'-bisphosphate nucleotidase 1 protein-coding 626038431 LOC116912746 zinc finger protein 431-like 11 14829658 14843351 - 30032202 116912746 MODEL JAAIVD010000006;XM_032916894 XP_032772785 protein-coding 626038439 LOC116914408 mitochondrial import inner membrane translocase subunit Tim23 13 7866660 7892336 - 22301074;30032202 116914408 MODEL JAAIVD010000008;XM_032918650 XP_032774541 protein-coding 626038450 Kctd7 potassium channel tetramerization domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intracellular glutamate homeostasis (ortholog); intracellular potassium ion homeostasis (ortholog); membrane hyperpolarization (ortholog); ASSOCIATED WITH generalized epilepsy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 16 23829670 23838418 - 22301074 116885677 MODEL JAAIVD010000004;XM_032886984 XP_032742875 BTB/POZ domain-containing protein KCTD7 protein-coding 626038458 LOC116900006 cytochrome c oxidase subunit NDUFA4-like 5 8227128 8227443 + 116900006 MODEL JAAIVD010000023 pseudo 626038459 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 95719923 95719994 + 116908471 MODEL JAAIVD010000027 trna 626038460 Slc25a15 solute carrier family 25 member 15 ENCODES a protein that exhibits antiporter activity (ortholog); L-arginine transmembrane transporter activity (ortholog); L-lysine transmembrane transporter activity (ortholog); INVOLVED IN L-arginine transmembrane transport (ortholog); L-lysine transmembrane transport (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); Cardiac Arrhythmias (ortholog); citrullinemia (ortholog); FOUND IN mitochondrion (ortholog) 13 64040298 64060758 + 30032202 116914631 MODEL JAAIVD010000008;XM_032919022 XP_032774913 mitochondrial ornithine transporter 1 protein-coding 626038470 LOC116902720 60S ribosomal protein L23a-like 6 52466748 52467217 + 116902720 MODEL JAAIVD010000024 pseudo 626038471 LOC116912493 14-3-3 protein sigma-like 11 18771116 18772079 - 116912493 MODEL JAAIVD010000006 pseudo 626038472 LOC116884735 protocadherin beta-3-like 15 927038 930460 + 22301074 116884735 MODEL JAAIVD010000010;XM_032885949 XP_032741840 protein-coding 626038477 Gpx1 glutathione peroxidase 1 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); peroxidase activity (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); apoptotic process (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Lewy body (ortholog) 8 99669080 99670215 + 22301074;30032202 116907581 MODEL JAAIVD010000027;XM_032910620 XP_032766511 protein-coding 626038483 LOC116895246 olfactory receptor 146-like 3 42784 43716 + 22301074;30032202 116895246 MODEL JAAIVD010000012;XM_032896566 XP_032752457 protein-coding 626038486 LOC116900807 centrosomal protein of 19 kDa-like 5 28313735 28314244 + 116900807 MODEL JAAIVD010000023 pseudo 626038487 LOC116914098 small nucleolar RNA SNORA68 12 70447986 70448120 + 116914098 MODEL JAAIVD010000007;XR_004389666 snorna 626038490 LOC116911509 olfactory receptor 6K3 10 52848126 52851591 + 22301074 116911509 MODEL JAAIVD010000005;XM_032915496;XM_032915497 XP_032771387;XP_032771388 protein-coding 626038496 LOC116897406 U6 spliceosomal RNA 3 214044325 214044431 + 116897406 MODEL JAAIVD010000012;XR_004387449 snrna 626038499 LOC116888265 uncharacterized LOC116888265 X 66003287 66020779 - 116888265 MODEL JAAIVD010000014;XR_004386293 ncrna 626038505 Itga5 integrin subunit alpha 5 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); cell adhesion (ortholog); cell adhesion mediated by integrin (ortholog); PARTICIPATES IN integrin mediated signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Gliosis (ortholog); Hyperalgesia (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) 1 259716536 259740042 + 22301074;30032202 116883197 MODEL JAAIVD010000025;XM_032884229 XP_032740120 integrin alpha-5 protein-coding 626038539 LOC116904675 small nucleolar RNA SNORD113/SNORD114 family 6 101363640 101363720 + 116904675 MODEL JAAIVD010000024 pseudo 626038540 Erp44 endoplasmic reticulum protein 44 ENCODES a protein that exhibits protein disulfide isomerase activity (ortholog); INVOLVED IN glycoprotein metabolic process (ortholog); protein folding (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 1 101286771 101375247 - 116902060 MODEL JAAIVD010000025;XM_032904352 XP_032760243 endoplasmic reticulum resident protein 44 protein-coding 626038556 Nodal nodal growth differentiation factor ENCODES a protein that exhibits cytokine activity (ortholog); receptor ligand activity (ortholog); type I activin receptor binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); anterior/posterior axis specification (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); Congenitally Corrected Transposition of the Great Arteries (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 18 27254330 27262479 + 22301074;30032202 116886952 MODEL JAAIVD010000013;XM_032888452 XP_032744343 nodal homolog protein-coding 626038563 LOC116898252 60S ribosomal protein L36-like 4 158674755 158675124 - 116898252 MODEL JAAIVD010000003 pseudo 626038564 LOC116895659 ADP/ATP translocase 2-like 3 186492648 186493881 + 116895659 MODEL JAAIVD010000012;XR_004387298 pseudo 626038567 Atp6v1e1 ATPase H+ transporting V1 subunit E1 ENCODES a protein that exhibits ATPase binding (ortholog); proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal recessive cutis laxa type IIC (ortholog); cutis laxa (ortholog); RASopathy (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 25924751 25945982 + 22301074;30032202 116903325 MODEL JAAIVD010000024;XM_032905766 XP_032761657 V-type proton ATPase subunit E 1 protein-coding 626038580 Spcs1 signal peptidase complex subunit 1 ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN signal peptide processing (ortholog); viral protein processing (ortholog); virion assembly (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; FOUND IN endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 13 6696179 6698435 - 22301074;30032202 116914429 MODEL JAAIVD010000008;XM_032918726 XP_032774617 protein-coding 626038588 Adprh ADP-ribosylarginine hydrolase ENCODES a protein that exhibits ADP-ribosylarginine hydrolase activity (ortholog); magnesium ion binding (ortholog); potassium ion binding (ortholog); INVOLVED IN protein de-ADP-ribosylation (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); COVID-19 (ortholog); FOUND IN extracellular space (ortholog) 4 23397375 23403950 - 22301074 116898843 MODEL JAAIVD010000003;XM_032900198 XP_032756089 protein-coding 626038596 LOC116900469 olfactory receptor 4A5-like 5 71421215 71422165 - 22301074 116900469 MODEL JAAIVD010000023;XM_032902205 XP_032758096 protein-coding 626038599 LOC116905836 small ubiquitin-related modifier 2-like 7 107505227 107505508 + 116905836 MODEL JAAIVD010000026 pseudo 626038600 LOC116888958 nucleophosmin-like X 113468862 113469712 + 116888958 MODEL JAAIVD010000014 pseudo 626038601 LOC116899486 cyclin-dependent kinases regulatory subunit 2-like 4 146069131 146069850 - 116899486 MODEL JAAIVD010000003 pseudo 626038602 Phospho2 phosphatase, orphan 2 5 47091937 47099398 + 22301074;30032202 116901487 MODEL JAAIVD010000023;XM_032903450 XP_032759341 pyridoxal phosphate phosphatase PHOSPHO2 protein-coding 626038610 LOC116913469 uncharacterized LOC116913469 12 59815190 59818455 - 116913469 MODEL JAAIVD010000007;XR_004389619;XR_004389620 ncrna 626038619 LOC116904270 60S ribosomal protein L18a-like 6 39817690 39818864 + 116904270 MODEL JAAIVD010000024 pseudo 626038620 LOC116898406 alanine and glycine-rich protein-like 4 83615263 83615793 + 116898406 MODEL JAAIVD010000003;XM_032899694 XP_032755585 protein-coding 626038623 LOC116904540 kidney androgen-regulated protein 6 15573750 15577014 + 116904540 MODEL JAAIVD010000024;XM_032907334 XP_032763225 protein-coding 626038631 LOC116893782 nucleophosmin-like 2 34708205 34709141 - 116893782 MODEL JAAIVD010000001 pseudo 626038632 Tmem135 transmembrane protein 135 ENCODES a protein that exhibits lipid transporter activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid derivative biosynthetic process (ortholog); fatty acid derivative transport (ortholog); ASSOCIATED WITH glioblastoma (ortholog); intellectual disability (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN lipid droplet (ortholog); mitochondrion (ortholog); peroxisomal membrane (ortholog) 2 111803718 111997301 + 116891863 MODEL JAAIVD010000001;XM_032893263 XP_032749154 protein-coding 626038651 Prok1 prokineticin 1 INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of vascular endothelial cell proliferation (ortholog); regulation of angiogenesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog) 3 51010687 51015991 + 116895367 MODEL JAAIVD010000012;XM_032896664;XM_032896665 XP_032752555;XP_032752556 prokineticin-1 protein-coding 626038659 Dthd1 death domain containing 1 ASSOCIATED WITH fundus dystrophy (ortholog); muscular dystrophy (ortholog); Norum disease (ortholog) 11 43176022 43217740 + 116911980 MODEL JAAIVD010000006;XM_032915893 XP_032771784 death domain-containing protein 1 protein-coding 626038669 Clec1a C-type lectin domain family 1 member A ASSOCIATED WITH aspergillosis (ortholog) 6 18144552 18169649 + 116903192 MODEL JAAIVD010000024;XM_032905568 XP_032761459 protein-coding 626038679 Parp2 poly(ADP-ribose) polymerase 2 ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); NAD DNA ADP-ribosyltransferase activity (ortholog); INVOLVED IN base-excision repair (ortholog); decidualization (ortholog); DNA ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Cardiomegaly (ortholog); lipodystrophy (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 12 72490460 72501612 - 22301074 116913727 MODEL JAAIVD010000007;XM_032918032 XP_032773923 poly [ADP-ribose] polymerase 2 protein-coding 626038699 LOC116899856 small nucleolar RNA SNORA17 4 181342252 181342379 - 116899856 MODEL JAAIVD010000003;XR_004387852 snorna 626038702 Scin scinderin INVOLVED IN actin filament capping (ortholog); actin filament severing (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN brush border (ortholog); protein-containing complex (ortholog) 7 53298848 53370657 - 22301074;30032202 116904987 MODEL JAAIVD010000026;XM_032907669 XP_032763560 adseverin protein-coding 626038722 LOC116885759 40S ribosomal protein S12-like 1 2422776 2426631 - 116885759 MODEL JAAIVD010000025 pseudo 626038723 Tgm7 transglutaminase 7 5 99235777 99259828 - 22301074;30032202 116900602 MODEL JAAIVD010000023;XM_032902318 XP_032758209 protein-glutamine gamma-glutamyltransferase Z protein-coding 626038739 LOC116914910 putative protein T-ENOL 13 10187694 10189346 + 116914910 MODEL JAAIVD010000008 pseudo 626038740 Lce6a late cornified envelope 6A 3 1464301 1464716 + 116895261 MODEL JAAIVD010000012;XM_032896579 XP_032752470 late cornified envelope protein 6A protein-coding 626038744 LOC116896060 ras-specific guanine nucleotide-releasing factor 2-like 3 204345872 204351769 + 22301074;30032202 116896060 MODEL JAAIVD010000012;XM_032897051 XP_032752942 protein-coding 626038751 LOC116898365 alpha-enolase-like 4 60342260 60343733 - 116898365 MODEL JAAIVD010000003 pseudo 626038752 LOC116909793 uncharacterized LOC116909793 9 54909282 54912180 - 116909793 MODEL JAAIVD010000002;XR_004389097 ncrna 626038756 LOC116906499 U2 spliceosomal RNA 7 72156646 72156856 - 116906499 MODEL JAAIVD010000026 pseudo 626038757 LOC116910584 uncharacterized LOC116910584 9 26524822 26538042 + 116910584 MODEL JAAIVD010000002;XR_004389159 ncrna 626038762 LOC116890327 U6 spliceosomal RNA 1 234776436 234776542 - 116890327 MODEL JAAIVD010000025;XR_004386550 snrna 626038765 Negr1 neuronal growth regulator 1 INVOLVED IN brain development (ortholog); cell-cell adhesion (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); scrapie (ortholog); FOUND IN apical dendrite (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 3 4267270 4696367 - 30032202 116896132 MODEL JAAIVD010000012;XM_032897116 XP_032753007 protein-coding 626038775 LOC116893126 heat shock protein HSP 90-alpha-like 2 77164131 77166374 + 116893126 MODEL JAAIVD010000001 pseudo 626038776 LOC116911899 U7 small nuclear RNA 10 5858026 5858088 + 116911899 MODEL JAAIVD010000005;XR_004389406 snrna 626038779 Bcor BCL6 corepressor ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); adenoid cystic carcinoma (ortholog); anterior segment dysgenesis 8 (ortholog); FOUND IN BCOR complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 9268340 9310619 + 22301074;30032202 116888483 MODEL JAAIVD010000014;XM_032889758 XP_032745649 BCL-6 corepressor protein-coding 626038798 LOC116893578 ferritin light chain 1-like 2 224148870 224165434 - 22301074;30032202 116893578 MODEL JAAIVD010000001;XM_032895283 XP_032751174 protein-coding 626038803 LOC116889526 small nucleolar RNA SNORA17 X 84942044 84942165 + 116889526 MODEL JAAIVD010000014 pseudo 626038804 LOC116900246 olfactory receptor 1002 5 62988884 62989840 - 22301074;30032202 116900246 MODEL JAAIVD010000023;XM_032901997 XP_032757888 protein-coding 626038807 LOC116899767 U6 spliceosomal RNA 4 82781295 82781400 + 116899767 MODEL JAAIVD010000003;XR_004387781 snrna 626038810 LOC116883524 histone H4 14 41883721 41884108 - 22301074;30032202 116883524 MODEL JAAIVD010000009;XM_032884696 XP_032740587 protein-coding 626038815 LOC116883523 histone H2B type 1-C/E/F/G/I 14 41887603 41888297 + 22301074;30032202 116883523 MODEL JAAIVD010000009;XM_032884695 XP_032740586 protein-coding 626038820 LOC116893861 olfactory receptor 287 2 61691658 61692605 - 22301074;30032202 116893861 MODEL JAAIVD010000001;XM_032895581 XP_032751472 protein-coding 626038824 Cdh17 cadherin 17 ENCODES a protein that exhibits integrin binding (ortholog); proton-dependent oligopeptide secondary active transmembrane transporter activity (ortholog); INVOLVED IN B cell differentiation (ortholog); calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH occupational asthma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) 1 131764759 131817039 - 22301074;30032202 116903364 MODEL JAAIVD010000025;XM_032905842 XP_032761733 cadherin-17 protein-coding 626038846 Opn3 opsin 3 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); all-trans retinal binding (ortholog); INVOLVED IN cellular response to UV-A (ortholog); keratinocyte differentiation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 10 54186586 54216933 - 22301074;30032202 116911115 MODEL JAAIVD010000005;XM_032914959 XP_032770850 opsin-3 protein-coding 626038854 LOC116906356 small nucleolar RNA SNORD113/SNORD114 family 7 127211323 127211403 + 116906356 MODEL JAAIVD010000026 pseudo 626038855 LOC116910672 small nucleolar RNA SNORA67 9 74585427 74585569 + 116910672 MODEL JAAIVD010000002;XR_004389204 snorna 626038858 LOC116891003 uncharacterized LOC116891003 2 15992622 15996626 - 116891003 MODEL JAAIVD010000001;XR_004386803 ncrna 626038863 LOC116889527 small nucleolar RNA SNORA17 X 66459507 66459616 - 116889527 MODEL JAAIVD010000014 pseudo 626038864 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889687 MODEL JAAIVD010000051 trna 626038865 LOC116896375 glutathione S-transferase Mu 1 3 50239011 50244703 + 22301074;30032202 116896375 MODEL JAAIVD010000012;XM_032897498 XP_032753389 protein-coding 626038877 LOC116894748 60S ribosomal protein L7a-like 2 136637008 136637833 - 116894748 MODEL JAAIVD010000001 pseudo 626038878 Ubqlnl ubiquilin like 2 101501582 101503831 + 30032202 116893991 MODEL JAAIVD010000001;XM_032895705 XP_032751596 ubiquilin-like protein protein-coding 626038883 LOC116894015 olfactory receptor 52A5-like 2 101850259 101851206 + 22301074 116894015 MODEL JAAIVD010000001;XM_032895730 XP_032751621 protein-coding 626038886 LOC116894772 methyl-CpG-binding domain protein 3-like 2B 2 216335387 216336231 - 116894772 MODEL JAAIVD010000001 pseudo 626038887 LOC116883714 prolactin-8A7-like 14 46245310 46250262 + 116883714 MODEL JAAIVD010000009 pseudo 626038888 Igfbp2 insulin like growth factor binding protein 2 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); female pregnancy (ortholog); negative regulation of osteoblast differentiation (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); contact dermatitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 4 146340498 146367860 + 22301074;30032202 116899489 MODEL JAAIVD010000003;XM_032901322 XP_032757213 insulin-like growth factor-binding protein 2 protein-coding 626038896 LOC116898432 igE-binding protein-like 4 91974846 91976471 - 22301074 116898432 MODEL JAAIVD010000003;XM_032899707 XP_032755598 protein-coding 626038899 LOC116907843 histone H3.3A-like 8 53534796 53535242 - 22301074;30032202 116907843 MODEL JAAIVD010000027;XM_032911032 XP_032766923 protein-coding 626038903 Rpl39 ribosomal protein L39 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cytoplasmic translation (ortholog); innate immune response in mucosa (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) X 103267179 103270196 - 22301074;30032202 116888893 MODEL JAAIVD010000014;XM_032890155 XP_032746046 60S ribosomal protein L39 protein-coding 626038910 Apcs amyloid P component, serum ENCODES a protein that exhibits calcium ion binding (ortholog); complement component C1q complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of glycoprotein metabolic process (ortholog); ASSOCIATED WITH amyloidosis (ortholog); congestive heart failure (ortholog); coronary artery disease (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) 10 51986837 51987871 - 30032202 116911421 H6X2Z8 MODEL JAAIVD010000005;JQ438925;XM_032915387 AFA37897;XP_032771278 SAP serum amyloid P-component protein-coding 626038916 LOC116907817 olfactory receptor class A-like protein 1 1 158204698 158253828 - 116907817 MODEL JAAIVD010000025 pseudo 626038917 LOC116914812 40S ribosomal protein S18 13 63217936 63218453 + 22301074;30032202 116914812 MODEL JAAIVD010000008;XM_032919268 XP_032775159 protein-coding 626038922 Neurl1b neuralized E3 ubiquitin protein ligase 1B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN ubiquitin-dependent endocytosis (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); early endosome (ortholog) 9 5021581 5049522 - 30032202 116909012 MODEL JAAIVD010000002;XM_032912486 XP_032768377 E3 ubiquitin-protein ligase NEURL1B protein-coding 626038931 LOC116914654 zinc finger protein 14-like 13 13753200 13763083 + 30032202 116914654 MODEL JAAIVD010000008;XM_032919050;XM_032919051;XM_032919052;XM_032919053;XM_032919054;XM_032919055 XP_032774941;XP_032774942;XP_032774943;XP_032774944;XP_032774945;XP_032774946 protein-coding 626038954 Lhx4 LIM homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); methyl-CpG binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); medial motor column neuron differentiation (ortholog); motor neuron axon guidance (ortholog); ASSOCIATED WITH combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency 4 (ortholog); combined pituitary hormone deficiency 6 (ortholog) 10 35118317 35157962 - 22301074;30032202 116911697 MODEL JAAIVD010000005;XM_032915652 XP_032771543 LIM/homeobox protein Lhx4 protein-coding 626038963 LOC116889286 uncharacterized LOC116889286 X 87442030 87450990 + 116889286 MODEL JAAIVD010000014;XR_004386371 ncrna 626038969 LOC116913013 small nucleolar RNA SNORD125 11 74009640 74009736 + 116913013 MODEL JAAIVD010000006;XR_004389566 snorna 626038972 LOC116888912 cytochrome c oxidase assembly factor 5-like X 24807860 24808141 + 116888912 MODEL JAAIVD010000014 pseudo 626038973 LOC116911400 sterile alpha motif domain-containing protein 12-like 1 228213109 228397801 - 22301074;30032202 116911400 MODEL JAAIVD010000025;XM_032915364;XM_032915371 XP_032771255;XP_032771262 protein-coding 626038983 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41354021 41354093 - 116884150 MODEL JAAIVD010000009 trna 626038984 Bfsp1 beaded filament structural protein 1 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); intermediate filament organization (ortholog); lens fiber cell development (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 33 (ortholog); coloboma (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); plasma membrane (ortholog) 5 123478703 123514514 - 30032202 116902036 MODEL JAAIVD010000023;XM_032904320 XP_032760211 filensin protein-coding 626038996 LOC116901210 uncharacterized LOC116901210 5 6888029 6889513 + 116901210 MODEL JAAIVD010000023;XR_004387966 ncrna 626039000 Itgb1 integrin subunit beta 1 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); C-X3-C chemokine binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon extension (ortholog); basement membrane organization (ortholog); PARTICIPATES IN altered Reelin signaling pathway; glomerulonephritis pathway; integrin mediated signaling pathway; ASSOCIATED WITH calcinosis (ortholog); cardiomyopathy (ortholog); congestive heart failure (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); basement membrane (ortholog) 17 48177636 48225750 + 30032202 116886689 MODEL JAAIVD010000011;XM_032888182 XP_032744073 integrin beta-1 protein-coding 626039020 LOC116913133 testis-specific serine/threonine-protein kinase 5 1 248705694 248708747 - 22301074;30032202 116913133 MODEL JAAIVD010000025;XM_032917331 XP_032773222 protein-coding 626039032 LOC116888421 major urinary protein-like 1 91448521 91451700 - 30032202 116888421 MODEL JAAIVD010000025;XM_032889693;XM_032889701 XP_032745584;XP_032745592 protein-coding 626039044 Abhd14a abhydrolase domain containing 14A FOUND IN cytoplasm (ortholog) 8 97739912 97747709 - 30032202 116907484 MODEL JAAIVD010000027;XM_032910470;XM_032910471;XM_032910472 XP_032766361;XP_032766362;XP_032766363 protein ABHD14A protein-coding 626039060 Gys1 glycogen synthase 1 ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); D-glucose binding (ortholog); glycogen synthase activity, transferring glucose-1-phosphate (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); heart development (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH cardiovascular system disease (ortholog); genetic disease (ortholog); Glycogen Storage Disease 0, Muscle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); inclusion body (ortholog) 2 154054586 154074513 - 22301074;30032202 116892151 MODEL JAAIVD010000001;XM_032893646 XP_032749537 glycogen [starch] synthase, muscle protein-coding 626039080 LOC116894626 60S ribosomal protein L23a-like 2 187373571 187374043 - 116894626 MODEL JAAIVD010000001 pseudo 626039081 Neu2 neuraminidase 2 ENCODES a protein that exhibits exo-alpha-sialidase activity (ortholog); INVOLVED IN ganglioside catabolic process (ortholog); glycoprotein catabolic process (ortholog); oligosaccharide catabolic process (ortholog); FOUND IN catalytic complex (ortholog); cytosol (ortholog) 4 159635116 159720638 + 30032202 116899607 MODEL JAAIVD010000003;XM_032901564;XR_004387738;XR_004387739;XR_004387740;XR_004387741;XR_004387742;XR_004387743;XR_004387744 XP_032757455 sialidase-2 protein-coding 626039104 LOC116915150 U6atac minor spliceosomal RNA 13 22100975 22101099 + 116915150 MODEL JAAIVD010000008;XR_004389819 snrna 626039107 LOC116908612 uncharacterized LOC116908612 9 33847649 33855337 - 116908612 MODEL JAAIVD010000002;XM_032911843;XM_032911844 XP_032767734;XP_032767735 uncharacterized protein LOC116908612 protein-coding 626039120 Ptp4a2 protein tyrosine phosphatase 4A2 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 28301917 28328500 - 22301074;30032202 116896016 MODEL JAAIVD010000025;XM_032897032;XM_032897033 XP_032752923;XP_032752924 protein tyrosine phosphatase type IVA 2 protein-coding 626039135 Col17a1 collagen type XVII alpha 1 chain INVOLVED IN hemidesmosome assembly (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1A (ortholog); amelogenesis imperfecta type 1B (ortholog); FOUND IN hemidesmosome (ortholog) 2 47170555 47216963 - 116891270 MODEL JAAIVD010000001;XM_032892165;XM_032892166 XP_032748056;XP_032748057 collagen alpha-1(XVII) chain protein-coding 626039198 LOC116913985 epididymal secretory protein E3-beta-like 12 72173275 72173848 - 116913985 MODEL JAAIVD010000007;XM_032918262 XP_032774153 protein-coding 626039203 LOC116884106 U2 spliceosomal RNA 14 51891129 51891217 - 116884106 MODEL JAAIVD010000009 pseudo 626039204 Nfix nuclear factor I X ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); atrioventricular canal morphogenesis (ortholog); bone mineralization (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); laryngomalacia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 15492405 15588735 + 22301074;30032202 116886297 MODEL JAAIVD010000011;XM_032887733;XM_032887734;XM_032887735;XM_032887736;XM_032887737;XM_032887738;XM_032887739 XP_032743624;XP_032743625;XP_032743626;XP_032743627;XP_032743628;XP_032743629;XP_032743630 nuclear factor 1 X-type protein-coding 626039236 Npas3 neuronal PAS domain protein 3 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN locomotory behavior (ortholog); maternal behavior (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 66627620 67442172 + 22301074;30032202 116905045 MODEL JAAIVD010000026;XM_032907727;XM_032907728;XM_032907729;XM_032907730;XM_032907731;XM_032907732;XM_032907733 XP_032763618;XP_032763619;XP_032763620;XP_032763621;XP_032763622;XP_032763623;XP_032763624 neuronal PAS domain-containing protein 3 protein-coding 626039261 Pnma5 PNMA family member 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN meiosis I (ortholog); phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cell cortex (ortholog); meiotic spindle (ortholog); nucleus (ortholog) X 129358583 129360712 + 116888654 MODEL JAAIVD010000014;XM_032889949 XP_032745840 paraneoplastic antigen-like protein 5 protein-coding 626039265 LOC116887424 class II histocompatibility antigen, M beta 1 chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); MHC class II protein complex assembly (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); MHC class II protein complex (ortholog) 18 8167162 8174307 - 22301074;30032202 116887424 MODEL JAAIVD010000013;XM_032889040;XM_032889041 XP_032744931;XP_032744932 protein-coding 626039278 Map7 microtubule associated protein 7 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); fertilization (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 2 216319492 216421719 - 22301074;30032202 116892975 MODEL JAAIVD010000001;XM_032894934 XP_032750825 ensconsin protein-coding 626039299 Ppp1cc protein phosphatase 1 catalytic subunit gamma ENCODES a protein that exhibits lamin binding (ortholog); phosphatase activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN blastocyst development (ortholog); circadian regulation of gene expression (ortholog); entrainment of circadian clock by photoperiod (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; dopamine signaling pathway; glycogen biosynthetic pathway; ASSOCIATED WITH congestive heart failure (ortholog); Ovarian Neoplasms (ortholog); Spinal Cord Injuries (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); dendritic spine (ortholog) 16 31655532 31672668 - 30032202 116885173 MODEL JAAIVD010000004;XM_032886389 XP_032742280 serine/threonine-protein phosphatase PP1-gamma catalytic subunit protein-coding 626039311 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 172501643 172501714 - 116890649 MODEL JAAIVD010000025 trna 626039312 Tbc1d9b TBC1 domain family member 9B INVOLVED IN regulation of cilium assembly (ortholog) 9 32800556 32837775 + 22301074 116908708 MODEL JAAIVD010000002;XM_032912040;XM_032912041;XM_032912043;XM_032912044;XM_032912045 XP_032767931;XP_032767932;XP_032767934;XP_032767935;XP_032767936 protein-coding 626039344 Hepacam2 HEPACAM family member 2 INVOLVED IN centrosome cycle (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN centrosome (ortholog); Golgi apparatus (ortholog); midbody (ortholog) 6 135118668 135149886 + 116904107 MODEL JAAIVD010000024;XM_032906982;XM_032906983 XP_032762873;XP_032762874 protein-coding 626039360 LOC116910646 U6 spliceosomal RNA 9 36906515 36906619 + 116910646 MODEL JAAIVD010000002;XR_004389182 snrna 626039363 Mideas mitotic deacetylase associated SANT domain protein FOUND IN nucleoplasm (ortholog) 7 98239298 98261453 - 30032202 116905262 MODEL JAAIVD010000026;XM_032908115 XP_032764006 ELM2 and SANT domain-containing protein 1 protein-coding 626039379 Dnah11 dynein axonemal heavy chain 11 INVOLVED IN cardiac septum morphogenesis (ortholog); cilium movement (ortholog); determination of left/right asymmetry in nervous system (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); autism spectrum disorder (ortholog); Coronary Disease (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) 7 117926779 118225282 + 22301074;30032202 116905395 MODEL JAAIVD010000026;XM_032908348 XP_032764239 dynein heavy chain 11, axonemal protein-coding 626039464 LOC116886791 U6 spliceosomal RNA 17 16456603 16456709 + 116886791 MODEL JAAIVD010000011;XR_004386182 snrna 626039467 Card14 caspase recruitment domain family member 14 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of protein phosphorylation (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Familial Pityriasis Rubra Pilaris (ortholog); genetic disease (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 64688446 64717389 - 22301074 116908816 MODEL JAAIVD010000002;XM_032912223;XM_032912224;XM_032912225;XM_032912226;XM_032912227;XM_032912228;XM_032912230;XM_032912231;XM_032912232;XM_032912233;XM_032912234;XR_004389030 XP_032768114;XP_032768115;XP_032768116;XP_032768117;XP_032768118;XP_032768119;XP_032768121;XP_032768122;XP_032768123;XP_032768124;XP_032768125 caspase recruitment domain-containing protein 14 protein-coding 626039527 Gria1 glutamate ionotropic receptor AMPA type subunit 1 ENCODES a protein that exhibits adenylate cyclase binding (ortholog); AMPA glutamate receptor activity (ortholog); amyloid-beta binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to amine stimulus (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric synapse (ortholog); axonal spine (ortholog) 9 40879210 41198259 - 22301074;30032202 116910137 MODEL JAAIVD010000002;XM_032913972;XM_032913973;XM_032913974 XP_032769863;XP_032769864;XP_032769865 glutamate receptor 1 protein-coding 626039556 LOC116886446 small nuclear ribonucleoprotein E-like 17 25303235 25303513 + 22301074;30032202 116886446 MODEL JAAIVD010000011;XM_032887946 XP_032743837 protein-coding 626039559 Bmpr1a bone morphogenetic protein receptor type 1A ENCODES a protein that exhibits ATP binding (ortholog); BMP binding (ortholog); BMP receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); anti-Mullerian hormone receptor signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); breast cancer (ortholog); chromosome 10q23 deletion syndrome (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); dendrite (ortholog) 13 10176476 10276935 - 22301074;30032202 116915109 MODEL JAAIVD010000008;XM_032919538 XP_032775429 bone morphogenetic protein receptor type-1A protein-coding 626039576 LOC116899277 uncharacterized LOC116899277 4 110701408 110703468 - 116899277 MODEL JAAIVD010000003;XR_004387702 ncrna 626039580 LOC116904728 small nucleolar RNA SNORA17 6 103806223 103806346 - 116904728 MODEL JAAIVD010000024 pseudo 626039581 Frmd1 FERM domain containing 1 ASSOCIATED WITH distal myopathy 4 (ortholog) 2 183526272 183538594 - 22301074;30032202 116892777 MODEL JAAIVD010000001;XM_032894651 XP_032750542 FERM domain-containing protein 1 protein-coding 626039595 LOC116883418 60S ribosomal protein L37-like 14 12230529 12230844 + 116883418 MODEL JAAIVD010000009 pseudo 626039596 LOC116902764 glyceraldehyde-3-phosphate dehydrogenase-like 6 68277060 68278052 + 116902764 MODEL JAAIVD010000024 pseudo 626039597 Cd27 CD27 molecule ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); CD27 signaling pathway (ortholog); extrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); Cachexia (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 22666835 22671868 + 22301074;30032202 116904587 MODEL JAAIVD010000024;XM_032907383 XP_032763274 CD27 antigen protein-coding 626039607 Slc2a7 solute carrier family 2 member 7 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fructose transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 1 10588194 10606953 - 22301074;30032202 116890253 MODEL JAAIVD010000025;XM_032890979 XP_032746870 solute carrier family 2, facilitated glucose transporter member 7 protein-coding 626039621 Apex1 apurinic/apyrimidinic endodeoxyribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); chromatin DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cell redox homeostasis (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 12 72388388 72390548 - 22301074;30032202 116913378 MODEL JAAIVD010000007;XM_032917548;XM_032917549 XP_032773439;XP_032773440 DNA-(apurinic or apyrimidinic site) lyase protein-coding 626039633 Pcnx1 pecanex 1 ASSOCIATED WITH prostate cancer (ortholog) 7 96053621 96187794 + 22301074 116905242 MODEL JAAIVD010000026;XM_032908069 XP_032763960 pecanex-like protein 1 protein-coding 626039673 Baz2b bromodomain adjacent to zinc finger domain 2B ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleus (ortholog) 5 37598658 37886789 - 22301074 116901437 MODEL JAAIVD010000023;XM_032903346;XM_032903347;XM_032903348;XM_032903349;XM_032903350;XM_032903351;XM_032903352;XM_032903353;XM_032903354;XM_032903355;XM_032903356;XM_032903357;XM_032903358;XM_032903359;XM_032903360;XM_032903362;XM_032903363;XR_004387992 XP_032759237;XP_032759238;XP_032759239;XP_032759240;XP_032759241;XP_032759242;XP_032759243;XP_032759244;XP_032759245;XP_032759246;XP_032759247;XP_032759248;XP_032759249;XP_032759250;XP_032759251;XP_032759253;XP_032759254 bromodomain adjacent to zinc finger domain protein 2B protein-coding 626039742 LOC116915173 5S ribosomal RNA 13 34004457 34004575 + 116915173 MODEL JAAIVD010000008 pseudo 626039743 Smarcc1 SWI/SNF related BAF chromatin remodeling complex subunit C1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); chromatin remodeling (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nBAF complex (ortholog) 8 100732149 100833651 + 30032202 116907657 MODEL JAAIVD010000027;XM_032910749 XP_032766640 SWI/SNF complex subunit SMARCC1;SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1 protein-coding 626039775 LOC116896312 TLC domain-containing protein 4 3 38618439 38669036 + 22301074;30032202 116896312 MODEL JAAIVD010000012;XM_032897400;XM_032897401;XM_032897402 XP_032753291;XP_032753292;XP_032753293 protein-coding 626039793 LOC116885465 ATP synthase subunit f, mitochondrial 16 24885990 24886415 + 30032202 116885465 MODEL JAAIVD010000004;XM_032886747 XP_032742638 protein-coding 626039798 LOC116890494 U1 spliceosomal RNA 1 249206625 249206787 + 116890494 MODEL JAAIVD010000025;XR_004386681 snrna 626039801 LOC116885028 small nucleolar RNA SNORA18 15 43038231 43038361 + 116885028 MODEL JAAIVD010000010;XR_004385916 snorna 626039804 Znf217 zinc finger protein 217 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); FOUND IN histone deacetylase complex (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 5 147771957 147797755 + 30032202 116902293 MODEL JAAIVD010000023;XM_032904728;XM_032904729;XM_032904730;XM_032904731 XP_032760619;XP_032760620;XP_032760621;XP_032760622 protein-coding 626039824 LOC116895026 small nucleolar RNA SNORA17 2 70536031 70536159 - 116895026 MODEL JAAIVD010000001;XR_004387212 snorna 626039827 Ltap1 lipid transport auxiliary protein 1 INVOLVED IN in utero embryonic development (ortholog); phagocytosis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrion (ortholog) 3 63578248 63591067 - 30032202 116896623 MODEL JAAIVD010000012;XM_032897896;XM_032897898;XM_032897899 XP_032753787;XP_032753789;XP_032753790 C3H1orf43 chromosome 3 C1orf43 homolog;uncharacterized protein C1orf43 homolog protein-coding 626039843 Cep350 centrosomal protein 350 INVOLVED IN non-motile cilium assembly (ortholog); protein localization to centrosome (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 10 35266013 35398930 - 30032202 116911415 MODEL JAAIVD010000005;XM_032915377 XP_032771268 centrosome-associated protein 350 protein-coding 626039884 Dph7 diphthamide biosynthesis 7 INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 5 12221636 12230282 - 22301074 116901330 MODEL JAAIVD010000023;XM_032903146;XM_032903147;XM_032903148;XM_032903149;XM_032903150 XP_032759037;XP_032759038;XP_032759039;XP_032759040;XP_032759041 diphthine methyltransferase protein-coding 626039910 Chst9 carbohydrate sulfotransferase 9 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN sulfur compound metabolic process (ortholog) 15 28191933 28429196 + 22301074;30032202 116884722 MODEL JAAIVD010000010;XM_032885909 XP_032741800 protein-coding 626039918 Hsph1 heat shock protein family H (Hsp110) member 1 ENCODES a protein that exhibits adenyl-nucleotide exchange factor activity (ortholog); alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of apoptotic signaling pathway (ortholog); negative regulation of establishment of protein localization to mitochondrion (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule (ortholog) 16 4221532 4240800 + 22301074;30032202 116885242 MODEL JAAIVD010000004;XM_032886479 XP_032742370 heat shock protein 105 kDa protein-coding 626039940 LOC116887370 proteasome subunit alpha type-6-like 18 47713186 47715588 - 116887370 MODEL JAAIVD010000013 pseudo 626039941 Scg5 secretogranin V ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); unfolded protein binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); peptide hormone processing (ortholog); regulation of hormone secretion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); medulloblastoma (ortholog); pituitary-dependent Cushing's disease (ortholog); FOUND IN nucleus (ortholog); secretory granule (ortholog) 5 91990379 92034789 - 22301074;30032202 116901757 MODEL JAAIVD010000023;XM_032903894;XM_032903895 XP_032759785;XP_032759786 neuroendocrine protein 7B2 protein-coding 626039955 Gsto2 glutathione S-transferase omega 2 ENCODES a protein that exhibits glutathione dehydrogenase (ascorbate) activity (ortholog); identical protein binding (ortholog); oxidoreductase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); L-ascorbic acid metabolic process (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN glutathione conjugation pathway; glutathione metabolic pathway; glutathione synthase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Parkinson's disease (ortholog) 2 47372814 47394966 + 22301074;30032202 116891273 MODEL JAAIVD010000001;XM_032892171;XM_032892172;XM_032892173 XP_032748062;XP_032748063;XP_032748064 glutathione S-transferase omega-2 protein-coding 626039972 LOC116908432 small nucleolar RNA U13 8 26993097 26993193 - 116908432 MODEL JAAIVD010000027 pseudo 626039973 Setd1a SET domain containing 1A, histone lysine methyltransferase ENCODES a protein that exhibits beta-catenin binding (ortholog); histone H3K4 methyltransferase activity (ortholog); RNA binding (ortholog); INVOLVED IN brain development (ortholog); positive regulation of gene expression (ortholog); positive regulation of neural precursor cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disease (ortholog); early-onset epilepsy 2 (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) 2 74104628 74128242 - 22301074;30032202 116891456 MODEL JAAIVD010000001;XM_032892532;XM_032892533;XM_032892534;XM_032892535;XM_032892536 XP_032748423;XP_032748424;XP_032748425;XP_032748426;XP_032748427 histone-lysine N-methyltransferase SETD1A protein-coding 626040008 LOC116886432 uncharacterized LOC116886432 17 17769467 17771460 + 116886432 MODEL JAAIVD010000011;XR_004386104 ncrna 626040013 Il21r interleukin 21 receptor ENCODES a protein that exhibits cytokine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); B-cell lymphoma (ortholog); Behcet's disease (ortholog) 2 76297579 76308125 - 22301074;30032202 116891536 MODEL JAAIVD010000001;XM_032892691 XP_032748582 interleukin-21 receptor protein-coding 626040025 Snx15 sorting nexin 15 FOUND IN cytosol (ortholog); nucleolus (ortholog); plasma membrane (ortholog) 2 1557391 1566252 + 22301074 116890672 MODEL JAAIVD010000001;XM_032891079 XP_032746970 sorting nexin-15 protein-coding 626040037 Ntmt2 N-terminal Xaa-Pro-Lys N-methyltransferase 2 ENCODES a protein that exhibits N-terminal protein N-methyltransferase activity (ortholog); INVOLVED IN N-terminal protein amino acid methylation (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN nucleus (ortholog) 10 42931606 42949018 - 22301074;30032202 116911193 MODEL JAAIVD010000005;XM_032915063 XP_032770954 Mettl11b alpha N-terminal protein methyltransferase 1B;methyltransferase like 11B protein-coding 626040045 Nubpl NUBP iron-sulfur cluster assembly factor, mitochondrial ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrion organization (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 7 65536862 65749428 + 22301074;30032202 116905041 MODEL JAAIVD010000026;XM_032907722 XP_032763613 iron-sulfur protein NUBPL;nucleotide binding protein like protein-coding 626040060 Tsen34 tRNA splicing endonuclease subunit 34 PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN nucleoplasm (ortholog) 2 178282383 178289915 + 22301074;30032202 116892704 MODEL JAAIVD010000001;XM_032894565;XM_032894567;XM_032894568;XM_032894569;XM_032894570 XP_032750456;XP_032750458;XP_032750459;XP_032750460;XP_032750461 tRNA-splicing endonuclease subunit Sen34 protein-coding 626040083 Fads1 fatty acid desaturase 1 ENCODES a protein that exhibits acyl-CoA (8-3)-desaturase activity (ortholog); acyl-CoA 6-desaturase activity (ortholog); omega-6 fatty acid desaturase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); arachidonate metabolic process (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 9660162 9674713 + 22301074;30032202 116890942 MODEL JAAIVD010000001;XM_032891584;XM_032891585 XP_032747475;XP_032747476 acyl-CoA (8-3)-desaturase protein-coding 626040103 LOC116883705 triosephosphate isomerase-like 14 56768207 56769594 + 22301074;30032202 116883705 MODEL JAAIVD010000009;XM_032884921 XP_032740812 protein-coding 626040108 Mxra7 matrix remodeling associated 7 INVOLVED IN megakaryocyte differentiation (ortholog); FOUND IN endoplasmic reticulum (ortholog) 9 67252063 67276122 + 116910058 MODEL JAAIVD010000002;XM_032913864;XM_032913865;XM_032913866;XM_032913867;XM_032913868;XR_004389130;XR_004389131 XP_032769755;XP_032769756;XP_032769757;XP_032769758;XP_032769759 matrix-remodeling-associated protein 7 protein-coding 626040132 Chrm1 cholinergic receptor muscarinic 1 ENCODES a protein that exhibits G protein-coupled acetylcholine receptor activity (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); neuromuscular synaptic transmission (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH asthma (ortholog); brain ischemia (ortholog); epilepsy (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); cholinergic synapse (ortholog) 2 9255281 9269884 - 22301074;30032202 116890939 MODEL JAAIVD010000001;XM_032891581 XP_032747472 muscarinic acetylcholine receptor M1 protein-coding 626040138 Smc2 structural maintenance of chromosomes 2 ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN kinetochore organization (ortholog); meiotic chromosome condensation (ortholog); meiotic chromosome segregation (ortholog); ASSOCIATED WITH colon adenocarcinoma (ortholog); colorectal cancer (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN condensed chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 1 103184672 103232152 + 22301074 116902108 MODEL JAAIVD010000025;XM_032904421 XP_032760312 structural maintenance of chromosomes protein 2 protein-coding 626040167 LOC116912298 vomeronasal type-2 receptor 116-like 11 18910293 18916839 - 22301074;30032202 116912298 MODEL JAAIVD010000006;XM_032916301;XM_032916302;XM_032916303;XM_032916304;XM_032916305;XM_032916306;XM_032916307 XP_032772192;XP_032772193;XP_032772194;XP_032772195;XP_032772196;XP_032772197;XP_032772198 protein-coding 626040187 Ndufaf5 NADH:ubiquinone oxidoreductase complex assembly factor 5 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leber plus disease (ortholog); Leigh disease (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 119473820 119503321 + 22301074;30032202 116902030 MODEL JAAIVD010000023;XM_032904308;XM_032904309;XM_032904310;XM_032904311;XM_032904312;XR_004388035 XP_032760199;XP_032760200;XP_032760201;XP_032760202;XP_032760203 arginine-hydroxylase NDUFAF5, mitochondrial protein-coding 626040216 C1H9orf152 chromosome 1 C9orf152 homolog 1 93666149 93671268 + 116901626 MODEL JAAIVD010000025;XM_032903693 XP_032759584 uncharacterized protein C9orf152 homolog protein-coding 626040222 Prickle3 prickle planar cell polarity protein 3 ASSOCIATED WITH Leber hereditary optic neuropathy (ortholog); Leber Optic Atrophy, Susceptibility To (ortholog); Leber plus disease (ortholog); FOUND IN mitochondrion (ortholog) X 14464634 14475260 - 22301074 116888681 MODEL JAAIVD010000014;XM_032889975 XP_032745866 protein-coding 626040235 LOC116886604 low molecular weight phosphotyrosine protein phosphatase-like 17 2646631 2647200 + 116886604 MODEL JAAIVD010000011 pseudo 626040236 LOC116894197 S-phase kinase-associated protein 2-like 2 106209836 106211108 - 116894197 MODEL JAAIVD010000001 pseudo 626040237 Rsph9 radial spoke head component 9 INVOLVED IN axonemal central apparatus assembly (ortholog); axoneme assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 12 (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); motile cilium (ortholog) 4 83725395 83737356 + 30032202 116899123 MODEL JAAIVD010000003;XM_032900648 XP_032756539 radial spoke head protein 9 homolog protein-coding 626040246 LOC116900943 glyceraldehyde-3-phosphate dehydrogenase-like 5 87901422 87902252 - 116900943 MODEL JAAIVD010000023 pseudo 626040247 LOC116911854 small nucleolar RNA SNORD75 10 40325196 40325257 + 116911854 MODEL JAAIVD010000005;XR_004389376 snorna 626040250 Lrrc15 leucine rich repeat containing 15 ENCODES a protein that exhibits collagen binding (ortholog); fibronectin binding (ortholog); laminin binding (ortholog); INVOLVED IN entry receptor-mediated virion attachment to host cell (ortholog); host-mediated suppression of symbiont invasion (ortholog); negative regulation of protein localization to plasma membrane (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) 4 15184617 15186362 - 22301074 116897850 MODEL JAAIVD010000003;XM_032899260 XP_032755151 leucine-rich repeat-containing protein 15 protein-coding 626040254 Hnrnpf heterogeneous nuclear ribonucleoprotein F ENCODES a protein that exhibits single-stranded RNA binding (ortholog); TBP-class protein binding (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); ASSOCIATED WITH renal glycosuria (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 28800983 28801905 - 30032202 116903950 MODEL JAAIVD010000024;XM_032906736 XP_032762627 protein-coding 626040258 C1H1orf210 chromosome 1 C1orf210 homolog ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 38509474 38515746 - 116913483 MODEL JAAIVD010000025;XM_032918059 XP_032773950 type III endosome membrane protein TEMP protein-coding 626040263 LOC116892495 uncharacterized LOC116892495 2 170397892 170401939 + 116892495 MODEL JAAIVD010000001;XR_004386954 ncrna 626040268 LOC116905098 high mobility group protein B3-like 7 2615043 2615711 - 116905098 MODEL JAAIVD010000026 pseudo 626040269 Nostrin nitric oxide synthase trafficking ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Stroke (ortholog); FOUND IN nucleus (ortholog) 5 46453046 46510842 + 22301074;30032202 116901478 MODEL JAAIVD010000023;XM_032903426 XP_032759317 protein-coding 626040289 LOC116913515 uncharacterized LOC116913515 12 2419027 2422637 + 116913515 MODEL JAAIVD010000007;XR_004389623;XR_004389624 ncrna 626040296 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 18955758 18955827 + 116911922 MODEL JAAIVD010000005 trna 626040297 Tcf24 transcription factor 24 1 144722388 144726075 - 22301074;30032202 116904727 MODEL JAAIVD010000025;XM_032907446 XP_032763337 protein-coding 626040301 LOC116899726 zinc finger protein 431-like 4 182367207 182367944 - 22301074 116899726 MODEL JAAIVD010000003;XM_032901767 XP_032757658 protein-coding 626040306 LOC116913208 60S ribosomal protein L39-like 12 68010733 68010914 - 116913208 MODEL JAAIVD010000007 pseudo 626040307 LOC116908362 small nucleolar RNA SNORA28 8 100126868 100127016 - 116908362 MODEL JAAIVD010000027;XR_004388912 snorna 626040310 Fam210b family with sequence similarity 210 member B INVOLVED IN cellular response to estradiol stimulus (ortholog); erythrocyte differentiation (ortholog); inflammatory response (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 145649773 145656911 - 30032202 116902288 MODEL JAAIVD010000023;XM_032904723 XP_032760614 protein FAM210B, mitochondrial protein-coding 626040318 Atp5mf ATP synthase membrane subunit f ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); FOUND IN mitochondrion (ortholog); nuclear membrane (ortholog); proton-transporting ATP synthase complex (ortholog) 16 8107402 8112781 + 30032202 116885666 MODEL JAAIVD010000004;XM_032886977 XP_032742868 ATP synthase subunit f, mitochondrial protein-coding 626040326 Gulp1 GULP PTB domain containing engulfment adaptor 1 INVOLVED IN phagocytosis, engulfment (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); thyroid gland disease (ortholog) 4 120612848 120727546 + 116899351 MODEL JAAIVD010000003;XM_032901054;XM_032901055;XM_032901056;XM_032901058;XM_032901059 XP_032756945;XP_032756946;XP_032756947;XP_032756949;XP_032756950 PTB domain-containing engulfment adapter protein 1 protein-coding 626040348 LOC116886981 ribosome biogenesis protein NSA2 homolog 18 43886701 43891223 - 116886981 MODEL JAAIVD010000013 pseudo 626040349 LOC116902796 alpha-enolase-like 6 81862201 81863487 - 116902796 MODEL JAAIVD010000024 pseudo 626040350 Ctc1 CST telomere replication complex component 1 ENCODES a protein that exhibits G-rich strand telomeric DNA binding (ortholog); single-stranded DNA binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); brain disease (ortholog); calcinosis (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); cytosol (ortholog) 9 48606351 48628646 + 22301074;30032202 116909220 MODEL JAAIVD010000002;XM_032912721 XP_032768612 CST complex subunit CTC1 protein-coding 626040377 LOC116883984 60S ribosomal protein L7a-like 14 29406211 29406947 + 116883984 MODEL JAAIVD010000009 pseudo 626040378 Dnajc16 DnaJ heat shock protein family (Hsp40) member C16 INVOLVED IN regulation of autophagosome size (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 16358175 16388865 + 116893241 MODEL JAAIVD010000025;XM_032895112 XP_032751003 dnaJ homolog subfamily C member 16 protein-coding 626040397 Rhoa ras homolog family member A ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); alpha-beta T cell lineage commitment (ortholog); androgen receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; eicosanoid signaling pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acute myocardial infarction (ortholog); alopecia (ortholog); FOUND IN apical junction complex (ortholog); axon (ortholog); cell cortex (ortholog) 8 99634077 99667981 + 22301074;30032202 116907577 MODEL JAAIVD010000027;XM_032910613;XM_032910614;XM_032910615;XM_032910616 XP_032766504;XP_032766505;XP_032766506;XP_032766507 transforming protein RhoA protein-coding 626040419 Tmem101 transmembrane protein 101 INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 61444939 61447988 - 30032202 116909974 MODEL JAAIVD010000002;XM_032913752 XP_032769643 protein-coding 626040427 Apold1 apolipoprotein L domain containing 1 INVOLVED IN angiogenesis (ortholog); autophagosome-dependent secretion (ortholog); endothelial cell activation (ortholog); ASSOCIATED WITH Bleeding Disorder, Vascular-Type (ortholog); FOUND IN cell-cell junction (ortholog); Weibel-Palade body (ortholog) 6 14457439 14462055 - 22301074;30032202 116903165 MODEL JAAIVD010000024;XM_032905533 XP_032761424 apolipoprotein L domain-containing protein 1 protein-coding 626040433 LOC116888116 testis-expressed protein 13C-1-like X 101977945 101979175 + 116888116 MODEL JAAIVD010000014 pseudo 626040434 LOC116900872 spindlin interactor and repressor of chromatin-binding protein-like 5 68910893 68915268 + 116900872 MODEL JAAIVD010000023 pseudo 626040435 LOC116897615 small nucleolar RNA SNORA17 3 67289952 67290055 + 116897615 MODEL JAAIVD010000012 pseudo 626040436 LOC116888469 homeobox protein TGIF2LX-like X 78954038 78954706 - 30032202 116888469 MODEL JAAIVD010000014;XM_032889750 XP_032745641 protein-coding 626040439 Tcaim T cell activation inhibitor, mitochondrial FOUND IN mitochondrion (ortholog) 8 113911540 113942637 + 30032202 116908005 MODEL JAAIVD010000027;XM_032911262 XP_032767153 T-cell activation inhibitor, mitochondrial protein-coding 626040454 Kif12 kinesin family member 12 INVOLVED IN negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Progressive Familial Intrahepatic Cholestasis 8 (ortholog); prostate cancer (ortholog); FOUND IN cilium (ortholog); extracellular exosome (ortholog); microtubule organizing center (ortholog) 1 90394772 90401427 + 22301074;30032202 116901294 MODEL JAAIVD010000025;XM_032903094 XP_032758985 kinesin-like protein KIF12 protein-coding 626040477 Peli1 pellino E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of necroptotic process (ortholog); negative regulation of T cell activation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); colorectal cancer (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN nucleus (ortholog); site of double-strand break (ortholog) 11 89305604 89360825 + 22301074;30032202 116911957 MODEL JAAIVD010000006;XM_032915878;XM_032915879 XP_032771769;XP_032771770 E3 ubiquitin-protein ligase pellino homolog 1 protein-coding 626040491 Cers3 ceramide synthase 3 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); cornification (ortholog); epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 9 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 133525887 133613380 - 22301074;30032202 116891988 MODEL JAAIVD010000001;XM_032893439 XP_032749330 protein-coding 626040507 Pjvk pejvakin INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); pexophagy (ortholog); programmed cell death in response to reactive oxygen species (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 59 (ortholog); beta thalassemia (ortholog); FOUND IN ciliary rootlet (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) 5 53999475 54007956 + 30032202 116900215 MODEL JAAIVD010000023;XM_032901968 XP_032757859 protein-coding 626040516 LOC116909827 uncharacterized LOC116909827 1 205498214 205499712 + 116909827 MODEL JAAIVD010000025;XR_004389102 ncrna 626040520 Sync syncoilin, intermediate filament protein INVOLVED IN intermediate filament-based process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuromuscular junction (ortholog) 1 28834113 28857253 - 30032202 116896170 MODEL JAAIVD010000025;XM_032897209;XM_032897217;XM_032897225;XM_032897234 XP_032753100;XP_032753108;XP_032753116;XP_032753125 syncoilin protein-coding 626040536 LOC116886790 U6 spliceosomal RNA 17 16562616 16562724 - 116886790 MODEL JAAIVD010000011;XR_004386181 snrna 626040539 Trmt13 tRNA methyltransferase 13 3 43126038 43139040 + 30032202 116896327 MODEL JAAIVD010000012;XM_032897422 XP_032753313 tRNA methyltransferase 13 homolog;tRNA:m(4)X modification enzyme TRM13 homolog protein-coding 626040554 LOC116895046 U2 spliceosomal RNA 2 75317969 75318158 + 116895046 MODEL JAAIVD010000001;XR_004387229 snrna 626040557 LOC116911032 uncharacterized LOC116911032 10 40324392 40326002 + 116911032 MODEL JAAIVD010000005;XR_004389302 ncrna 626040564 LOC116905236 cytochrome c oxidase assembly protein COX16 homolog, mitochondrial INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 22 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 7 95668433 95683522 - 30032202 116905236 MODEL JAAIVD010000026;XM_032908061 XP_032763952 protein-coding 626040572 Jrk Jrk helix-turn-helix protein ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH childhood absence epilepsy (ortholog); generalized epilepsy (ortholog); juvenile myoclonic epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ribonucleoprotein complex (ortholog) 1 247448233 247451508 - 22301074;30032202 116912514 MODEL JAAIVD010000025;XM_032916605 XP_032772496 jerky protein homolog protein-coding 626040577 LOC116905105 Fanconi anemia group M protein homolog 7 78795147 78839222 + 22301074;30032202 116905105 MODEL JAAIVD010000026;XM_032907841;XM_032907842 XP_032763732;XP_032763733 protein-coding 626040605 Lbx1 ladybird homeobox 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN heart looping (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of glutamatergic neuron differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Congenital Central Hypoventilation Syndrome 3 (ortholog); FOUND IN transcription regulator complex (ortholog) 2 44721593 44724134 - 22301074 116893809 MODEL JAAIVD010000001;XM_032895519 XP_032751410 transcription factor LBX1 protein-coding 626040611 LOC116910527 60S ribosomal protein L38-like 9 13116373 13116582 + 22301074;30032202 116910527 MODEL JAAIVD010000002;XM_032914430 XP_032770321 protein-coding 626040614 Mtx1 metaxin 1 INVOLVED IN lactation (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog); SAM complex (ortholog) 3 64462349 64468263 + 22301074;30032202 116896660 MODEL JAAIVD010000012;XM_032897996 XP_032753887 metaxin-1 protein-coding 626040625 Med21 mediator complex subunit 21 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN blastocyst development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 6 4320697 4327573 + 22301074;30032202 116903092 MODEL JAAIVD010000024;XM_032905413 XP_032761304 mediator of RNA polymerase II transcription subunit 21 protein-coding 626040633 LOC116885892 autism susceptibility gene 2 protein homolog 16 14791728 14797865 - 116885892 MODEL JAAIVD010000004 pseudo 626040634 Znf148 zinc finger protein 148 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); GLOBAL DEVELOPMENTAL DELAY, ABSENT OR HYPOPLASTIC CORPUS CALLOSUM, AND DYSMORPHIC FACIES (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 18185570 18297474 + 30032202;33864383 116898793 MODEL JAAIVD010000003;XM_032900138;XM_032900139;XM_032900140;XM_032900142;XM_032900143 XP_032756029;XP_032756030;XP_032756031;XP_032756033;XP_032756034 protein-coding 626040663 Milr1 mast cell immunoglobulin like receptor 1 INVOLVED IN mast cell degranulation (ortholog); negative regulation of mast cell activation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog) 9 72366491 72383516 - 116909874 MODEL JAAIVD010000002;XM_032913609;XM_032913610;XM_032913611 XP_032769500;XP_032769501;XP_032769502 allergin-1 protein-coding 626040683 LOC116902081 uncharacterized LOC116902081 5 128542056 128544418 - 116902081 MODEL JAAIVD010000023;XR_004388039 ncrna 626040687 LOC116903362 heat shock protein HSP 90-alpha-like 6 30113082 30115860 - 22301074;30032202 116903362 MODEL JAAIVD010000024;XM_032905837 XP_032761728 protein-coding 626040693 Ribc2 RIB43A domain with coiled-coils 2 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 1 254502512 254517948 + 116890167 MODEL JAAIVD010000025;XM_032890902 XP_032746793 RIB43A-like with coiled-coils protein 2 protein-coding 626040704 Actr8 actin related protein 8 INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN centrosome (ortholog); Ino80 complex (ortholog); nucleoplasm (ortholog) 13 5694073 5708686 + 30032202 116914561 MODEL JAAIVD010000008;XM_032918914;XM_032918915 XP_032774805;XP_032774806 actin-related protein 8 protein-coding 626040726 Rasl10b RAS like family 10 member B INVOLVED IN positive regulation of peptide hormone secretion (ortholog); regulation of systemic arterial blood pressure by atrial natriuretic peptide (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 9 87262182 87274486 - 22301074 116909426 MODEL JAAIVD010000002;XM_032913000;XM_032913001;XM_032913002 XP_032768891;XP_032768892;XP_032768893 ras-like protein family member 10B protein-coding 626040740 Wdr77 WD repeat domain 77 ENCODES a protein that exhibits methyl-CpG binding (ortholog); transcription coactivator activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN Cul4B-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 52160352 52170372 - 22301074;30032202 116896410 MODEL JAAIVD010000012;XM_032897554 XP_032753445 methylosome protein 50 protein-coding 626040754 LOC116914015 annexin A2-like 12 58869309 58870605 - 116914015 MODEL JAAIVD010000007;XR_004389652 pseudo 626040757 Ccdc179 coiled-coil domain containing 179 2 148629009 148632941 + 116894316 MODEL JAAIVD010000001;XM_032896010 XP_032751901 coiled-coil domain-containing protein 179 protein-coding 626040765 Smc6 structural maintenance of chromosomes 6 ENCODES a protein that exhibits DNA secondary structure binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular senescence (ortholog); DNA damage response (ortholog); host-mediated suppression of viral genome replication (ortholog); ASSOCIATED WITH Laterality Defects, Autosomal Dominant (ortholog); FOUND IN chromosome, centromeric region (ortholog); chromosome, telomeric region (ortholog); interchromatin granule (ortholog) 7 31250066 31302985 + 22301074;30032202 116904879 MODEL JAAIVD010000026;XM_032907479 XP_032763370 structural maintenance of chromosomes protein 6 protein-coding 626040796 LOC116893369 histone H3.3C-like 2 165184397 165186241 + 116893369 MODEL JAAIVD010000001 pseudo 626040797 LOC116903026 probable ribosome biogenesis protein RLP24 6 157529752 157530236 - 116903026 MODEL JAAIVD010000024 pseudo 626040798 LOC116912655 heterogeneous nuclear ribonucleoprotein A3-like 11 1769952 1771007 - 116912655 MODEL JAAIVD010000006 pseudo 626040799 LOC116905556 40S ribosomal protein S17-like 7 4622771 4623214 + 116905556 MODEL JAAIVD010000026 pseudo 626040800 LOC116900785 seminal vesicle secretory protein 3A-like 5 153692082 153694293 - 22301074;30032202 116900785 MODEL JAAIVD010000023;XM_032902495 XP_032758386 protein-coding 626040807 Sipa1l1 signal induced proliferation associated 1 like 1 ENCODES a protein that exhibits actin filament binding (ortholog); ephrin receptor binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); juvenile rheumatoid arthritis (ortholog); Weight Gain (ortholog); FOUND IN actin cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 7 96326644 96601146 + 22301074;30032202 116905243 MODEL JAAIVD010000026;XM_032908070;XM_032908071;XM_032908072;XM_032908073;XM_032908074 XP_032763961;XP_032763962;XP_032763963;XP_032763964;XP_032763965 signal-induced proliferation-associated 1-like protein 1 protein-coding 626040845 LOC116898025 60S ribosomal protein L7-like 4 79508740 79509524 - 116898025 MODEL JAAIVD010000003 pseudo 626040846 LOC116914645 heat shock 70 kDa protein 4 13 59009822 59012623 + 22301074;30032202 116914645 MODEL JAAIVD010000008;XM_032919040 XP_032774931 protein-coding 626040851 Bend3 BEN domain containing 3 ENCODES a protein that exhibits rDNA binding (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of ATP metabolic process (ortholog); FOUND IN heterochromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 43211023 43230859 + 22301074;30032202 116887398 MODEL JAAIVD010000013;XM_032888991 XP_032744882 BEN domain-containing protein 3 protein-coding 626040858 LOC116911503 contactin-associated protein like 5-2-like 10 73479125 73673070 - 116911503 MODEL JAAIVD010000005;XM_032915490 XP_032771381 protein-coding 626040865 LOC116898161 protein-lysine methyltransferase METTL21E 4 120298161 120315479 + 30032202 116898161 MODEL JAAIVD010000003;XM_032899537 XP_032755428 protein-coding 626040872 Wnt4 Wnt family member 4 ENCODES a protein that exhibits frizzled binding (ortholog); receptor ligand activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH 46,XX Sex Reversal with Dysgenesis of Kidneys, Adrenals, and Lungs (ortholog); acute kidney failure (ortholog); Dwarfism (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular matrix (ortholog) 1 20900945 20919904 - 22301074;30032202 116886627 MODEL JAAIVD010000025;XM_032888135 XP_032744026 protein Wnt-4 protein-coding 626040881 LOC116909958 protein RoBo-1 9 39785749 39797711 - 116909958 MODEL JAAIVD010000002;XM_032913733 XP_032769624 protein-coding 626040892 LOC116885009 60S ribosomal protein L34-like 15 6495881 6496232 + 116885009 MODEL JAAIVD010000010 pseudo 626040893 LOC116894424 keratin-associated protein 20-2-like 2 158843260 158843418 - 116894424 MODEL JAAIVD010000001;XM_032896128 XP_032752019 protein-coding 626040896 Gcfc2 GC-rich sequence DNA-binding factor 2 INVOLVED IN spliceosomal complex assembly (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 64157758 64196182 - 30032202 116903653 MODEL JAAIVD010000024;XM_032906309 XP_032762200 protein-coding 626040917 LOC116894668 trace amine-associated receptor 6 2 210043569 210044606 - 22301074;30032202 116894668 MODEL JAAIVD010000001;XM_032896371 XP_032752262 protein-coding 626040920 LOC116897344 uncharacterized LOC116897344 3 218324354 218334836 - 116897344 MODEL JAAIVD010000012;XR_004387418 ncrna 626040925 LOC116888254 ovomucoid-like X 47406517 47409868 - 22301074 116888254 MODEL JAAIVD010000014;XM_032889538 XP_032745429 protein-coding 626040934 Arhgef4 Rho guanine nucleotide exchange factor 4 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN filopodium assembly (ortholog); lamellipodium assembly (ortholog) 4 110930080 111021826 + 22301074 116899279 MODEL JAAIVD010000003;XM_032900910;XM_032900911 XP_032756801;XP_032756802 protein-coding 626040954 LOC116884728 protocadherin gamma-C4 15 7080364 7264458 - 22301074;9865466 116884728 O08963 MODEL AB004276;AB004277;AB004278;AB006802;JAAIVD010000010;XM_032885918;XM_032885919;XM_032885920;XM_032885921;XM_032885922;XM_032885923;XM_032885924;XM_032885926;XM_032885927;XM_032885928;XM_032885929;XM_032885930;XM_032885931;XM_032885932;XM_032885933;XM_032885934;XM_032885936;XM_032885937;XM_032885938;XM_032885939;XM_032885940;XM_032885941;XM_032885942;XM_032885943;XM_032885944;XR_004385890 BAA20359;BAA20360;BAA20361;BAA22078;XP_032741809;XP_032741810;XP_032741811;XP_032741812;XP_032741813;XP_032741814;XP_032741815;XP_032741817;XP_032741818;XP_032741819;XP_032741820;XP_032741821;XP_032741822;XP_032741823;XP_032741824;XP_032741825;XP_032741827;XP_032741828;XP_032741829;XP_032741830;XP_032741831;XP_032741832;XP_032741833;XP_032741834;XP_032741835 protocadherin 2;protocadherin 4;protocadherin 5;protocadherin 6;protocadherin gamma-A1;protocadherin gamma-A10;protocadherin gamma-A11;protocadherin gamma-A12;protocadherin gamma-A2;protocadherin gamma-A3;protocadherin gamma-A4;protocadherin gamma-A5;protocadherin gamma-A6;protocadherin gamma-A7;protocadherin gamma-A8;protocadherin gamma-A9;protocadherin gamma-B1;protocadherin gamma-B2;protocadherin gamma-B5;protocadherin gamma-B6;protocadherin gamma-C3;protocadherin gamma-C5 protein-coding 626041039 LOC116909382 olfactory receptor 1500-like 9 92764324 92765262 - 22301074;30032202 116909382 MODEL JAAIVD010000002;XM_032912937 XP_032768828 protein-coding 626041042 Znf606 zinc finger protein 606 ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN nucleoplasm (ortholog) 2 174489728 174516348 - 30032202 116892635 MODEL JAAIVD010000001;XM_032894455 XP_032750346 protein-coding 626041053 Rce1 Ras converting CAAX endopeptidase 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN CAAX-box protein maturation (ortholog); CAAX-box protein processing (ortholog); protein prenylation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 3040128 3043195 + 22301074;30032202 116890765 MODEL JAAIVD010000001;XM_032891226;XM_032891229;XM_032891230;XM_032891231 XP_032747117;XP_032747120;XP_032747121;XP_032747122 CAAX prenyl protease 2 protein-coding 626041073 Pex11g peroxisomal biogenesis factor 11 gamma INVOLVED IN peroxisome fission (ortholog); regulation of peroxisome size (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) 16 1376788 1384053 - 22301074;30032202 116885215 MODEL JAAIVD010000004;XM_032886449 XP_032742340 peroxisomal membrane protein 11C protein-coding 626041082 LOC116884935 40S ribosomal protein SA-like 15 19767276 19768116 + 116884935 MODEL JAAIVD010000010 pseudo 626041083 Lrfn5 leucine rich repeat and fibronectin type III domain containing 5 INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); regulation of presynapse assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 7 75483317 75500026 + 22301074 116905093 MODEL JAAIVD010000026;XM_032907816 XP_032763707 leucine-rich repeat and fibronectin type-III domain-containing protein 5 protein-coding 626041091 Bicc1 BicC family RNA binding protein 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); heart development (ortholog); kidney development (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); CAKUT (ortholog) 18 15700653 15943169 + 22301074;30032202 116887074 MODEL JAAIVD010000013;XM_032888580;XM_032888581 XP_032744471;XP_032744472 protein bicaudal C homolog 1 protein-coding 626041118 LOC116889027 40S ribosomal protein S6-like 1 116532211 116532933 + 116889027 MODEL JAAIVD010000025 pseudo 626041119 Brf2 BRF2 general transcription factor IIIB subunit ENCODES a protein that exhibits RNA polymerase III type 3 promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN transcription factor TFIIIB complex (ortholog) 13 59387505 59392216 + 30032202 116914549 MODEL JAAIVD010000008;XM_032918898 XP_032774789 BRF2 RNA polymerase III transcription initiation factor subunit;transcription factor IIIB 50 kDa subunit protein-coding 626041127 Gtf2h1 general transcription factor IIH subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of DNA-templated transcription (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); Teratozoospermia (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription factor TFIIH core complex (ortholog) 2 152548529 152576027 - 30032202 116892096 MODEL JAAIVD010000001;XM_032893572 XP_032749463 protein-coding 626041146 LOC116901637 uncharacterized LOC116901637 5 66168748 66183669 + 116901637 MODEL JAAIVD010000023;XR_004388009 ncrna 626041151 LOC116913388 28S ribosomal protein S16, mitochondrial-like 12 76519733 76520136 - 116913388 MODEL JAAIVD010000007 pseudo 626041152 Ccdc177 coiled-coil domain containing 177 7 94971559 94978468 - 116905227 MODEL JAAIVD010000026;XM_032908042 XP_032763933 coiled-coil domain-containing protein 177 protein-coding 626041158 Flacc1 flagellum associated containing coiled-coil domains 1 ASSOCIATED WITH anthracosis (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); outer dense fiber (ortholog) 4 133596307 133624576 + 30032202 116899421 MODEL JAAIVD010000003;XM_032901160 XP_032757051 flagellum-associated coiled-coil domain-containing protein 1 protein-coding 626041177 Zc2hc1c zinc finger C2HC-type containing 1C 7 99393109 99401745 + 116905294 MODEL JAAIVD010000026;XM_032908164 XP_032764055 zinc finger C2HC domain-containing protein 1C protein-coding 626041184 LOC116891916 solute carrier family 35 member E2A 1 5074924 5100867 - 30032202 116891916 MODEL JAAIVD010000025;XM_032893345 XP_032749236 protein-coding 626041197 LOC116887953 prohibitin-like X 64235051 64248557 - 116887953 MODEL JAAIVD010000014 pseudo 626041198 Wnk4 WNK lysine deficient protein kinase 4 ENCODES a protein that exhibits chloride ion binding (ortholog); ion channel inhibitor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN aldosterone secretion (ortholog); calcium ion homeostasis (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Gitelman syndrome (ortholog); hypertension (ortholog); FOUND IN bicellular tight junction (ortholog); cell body (ortholog); cytoplasm (ortholog) 9 60564723 60581426 + 22301074;30032202 116908873 MODEL JAAIVD010000002;XM_032912317 XP_032768208 serine/threonine-protein kinase WNK4 protein-coding 626041220 LOC116906560 28S ribosomal protein L42, mitochondrial-like 8 73168894 73169319 - 30032202 116906560 MODEL JAAIVD010000027;XM_032909273 XP_032765164 protein-coding 626041223 Cd59 CD59 molecule (CD59 blood group) ENCODES a protein that exhibits complement binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN complement activation (ortholog); innate immune response (ortholog); negative regulation of activation of membrane attack complex (ortholog); ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Alcoholic Liver Diseases (ortholog); anterior uveitis (ortholog); FOUND IN cell surface (ortholog); compact myelin (ortholog); external side of plasma membrane (ortholog) 5 81896502 81908484 + 30032202 116901694 MODEL JAAIVD010000023;XM_032903823 XP_032759714 CD59 glycoprotein protein-coding 626041230 LOC116912221 60S ribosomal protein L32 11 21138472 21138985 - 22301074;30032202 116912221 MODEL JAAIVD010000006;XM_032916178 XP_032772069 protein-coding 626041235 Nmnat3 nicotinamide nucleotide adenylyltransferase 3 ENCODES a protein that exhibits nicotinamide-nucleotide adenylyltransferase activity (ortholog); nicotinate-nucleotide adenylyltransferase activity (ortholog); INVOLVED IN NAD+ biosynthetic process (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); nicotinamide metabolic process (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH glaucoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN axon (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 89774877 89787040 + 22301074;30032202 116907767 MODEL JAAIVD010000027;XM_032910906 XP_032766797 nicotinamide/nicotinic acid mononucleotide adenylyltransferase 3 protein-coding 626041241 LOC116908092 uncharacterized LOC116908092 8 51496359 51499070 + 116908092 MODEL JAAIVD010000027;XR_004388873 ncrna 626041246 LOC116911502 eukaryotic initiation factor 4A-I-like 10 73356532 73357740 + 116911502 MODEL JAAIVD010000005 pseudo 626041247 LOC116884416 nucleophosmin-like 15 74707462 74708250 + 30032202 116884416 MODEL JAAIVD010000010;XM_032885511 XP_032741402 protein-coding 626041251 LOC116913011 small nucleolar RNA SNORA77 11 22329540 22329643 + 116913011 MODEL JAAIVD010000006;XR_004389565 snorna 626041254 LOC116905852 uncharacterized LOC116905852 7 12736839 12767530 - 116905852 MODEL JAAIVD010000026;XR_004388571 ncrna 626041259 Fbf1 Fas binding factor 1 INVOLVED IN apical junction assembly (ortholog); cilium assembly (ortholog); establishment of epithelial cell polarity (ortholog); FOUND IN apical junction complex (ortholog); centriole (ortholog); centrosome (ortholog) 9 67896311 67922131 + 30032202 116909149 MODEL JAAIVD010000002;XM_032912635 XP_032768526 fas-binding factor 1 protein-coding 626041292 Ccdc43 coiled-coil domain containing 43 FOUND IN cytosol (ortholog) 9 61986871 61999199 - 116909562 MODEL JAAIVD010000002;XM_032913179 XP_032769070 coiled-coil domain-containing protein 43 protein-coding 626041301 LOC116886233 arylacetamide deacetylase-like 4 1 14076657 14086766 + 22301074;30032202 116886233 MODEL JAAIVD010000025;XM_032887642 XP_032743533 protein-coding 626041307 Krcc1 lysine rich coiled-coil 1 6 74286377 74299481 + 116903681 MODEL JAAIVD010000024;XM_032906341;XM_032906342 XP_032762232;XP_032762233 lysine-rich coiled-coil protein 1 protein-coding 626041317 Actr10 actin related protein 10 INVOLVED IN microtubule-based movement (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN dynactin complex (ortholog) 7 84596775 84622177 + 30032202 116905136 MODEL JAAIVD010000026;XM_032907898 XP_032763789 actin-related protein 10 protein-coding 626041334 LOC116892435 nucleophosmin-like 2 20108123 20109007 + 30032202 116892435 MODEL JAAIVD010000001;XM_032894124 XP_032750015 protein-coding 626041338 Tex22 testis expressed 22 FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog) 7 130680413 130693682 + 116905930 MODEL JAAIVD010000026;XM_032908921 XP_032764812 testis-expressed protein 22 protein-coding 626041343 Igf2bp2 insulin like growth factor 2 mRNA binding protein 2 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN cold-induced thermogenesis (ortholog); CRD-mediated mRNA stabilization (ortholog); energy homeostasis (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); autosomal dominant tubulointerstitial kidney disease 1 (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytoskeleton (ortholog) 4 6736681 6836649 - 30032202 116898716 MODEL JAAIVD010000003;XM_032900008 XP_032755899 insulin-like growth factor 2 mRNA-binding protein 2 protein-coding 626041363 LOC116888403 uncharacterized LOC116888403 X 65873525 65881093 - 116888403 MODEL JAAIVD010000014;XR_004386307 pseudo 626041366 Xiap X-linked inhibitor of apoptosis ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to hydrogen peroxide (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; intrinsic apoptotic pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) X 108899568 108940797 + 30032202 116888330 MODEL JAAIVD010000014;XM_032889600;XM_032889601;XM_032889602 XP_032745491;XP_032745492;XP_032745493 E3 ubiquitin-protein ligase XIAP protein-coding 626041383 LOC116897363 uncharacterized LOC116897363 3 221320459 221327281 + 116897363 MODEL JAAIVD010000012;XR_004387424 ncrna 626041387 LOC116909213 olfactory receptor 1361-like 9 38345326 38355155 - 22301074;30032202 116909213 MODEL JAAIVD010000002;XM_032912715 XP_032768606 protein-coding 626041396 LOC116899852 small nucleolar RNA SNORA17 4 2130955 2131087 - 116899852 MODEL JAAIVD010000003;XR_004387848 snorna 626041399 Mrc1 mannose receptor C-type 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); D-mannose binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to type II interferon (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); allergic rhinitis (ortholog); COVID-19 (ortholog); FOUND IN cell surface (ortholog); endosome membrane (ortholog); plasma membrane (ortholog) 14 9311830 9388735 - 30032202 116883930 MODEL JAAIVD010000009;XM_032885181 XP_032741072 macrophage mannose receptor 1 protein-coding 626041432 LOC116909654 hemoglobin subunit zeta 9 3600905 3602446 - 22301074;30032202 116909654 MODEL JAAIVD010000002;XM_032913306 XP_032769197 protein-coding 626041439 LOC116894552 cationic amino acid transporter 3-like 2 177769055 177781471 - 22301074;30032202 116894552 MODEL JAAIVD010000001;XM_032896261;XM_032896262 XP_032752152;XP_032752153 protein-coding 626041457 LOC116888812 interferon-induced very large GTPase 1-like X 90578326 90585809 - 22301074 116888812 MODEL JAAIVD010000014;XM_032890091 XP_032745982 protein-coding 626041461 LOC116887387 60S ribosomal protein L37a-like 18 26055332 26055610 + 116887387 MODEL JAAIVD010000013 pseudo 626041462 Uts2b urotensin 2B ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN regulation of blood pressure (ortholog) 4 12919082 12933882 + 22301074 116897836 MODEL JAAIVD010000003;XM_032899252 XP_032755143 urotensin-2B protein-coding 626041471 LOC116895732 protein PBDC1-like 3 27415908 27471425 + 116895732 MODEL JAAIVD010000012 pseudo 626041472 Dbt dihydrolipoamide branched chain transacylase E2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); maple syrup urine disease (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 3 43162763 43190914 - 30032202 116896331 MODEL JAAIVD010000012;XM_032897429 XP_032753320 lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial protein-coding 626041487 Sft2d1 SFT2 domain containing 1 2 187175150 187190859 + 22301074;30032202 116892811 MODEL JAAIVD010000001;XM_032894687 XP_032750578 vesicle transport protein SFT2A protein-coding 626041499 LOC116893720 olfactory receptor 10Q1-like 2 13681264 13682220 + 22301074 116893720 MODEL JAAIVD010000001;XM_032895435 XP_032751326 protein-coding 626041502 Gdf1 growth differentiation factor 1 INVOLVED IN endoderm development (ortholog); in utero embryonic development (ortholog); mesoderm development (ortholog); ASSOCIATED WITH annular pancreas (ortholog); Cardiomegaly (ortholog); congenital heart disease (ortholog) 13 12585191 12588304 + 22301074;30032202 116914251 MODEL JAAIVD010000008;XM_032918462 XP_032774353 embryonic growth/differentiation factor 1 protein-coding 626041508 LOC116890610 small nucleolar RNA SNORA11 1 232696715 232696841 + 116890610 MODEL JAAIVD010000025;XR_004386761 snorna 626041511 LOC116904971 Krueppel-like factor 17 7 30303965 30304984 + 30032202 116904971 MODEL JAAIVD010000026;XM_032907650 XP_032763541 protein-coding 626041514 Psen2 presenilin 2 ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); endopeptidase activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid-beta formation (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the macromolecules modifying the main players; Alzheimer's disease pathway; Notch signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Alzheimer's disease 4 (ortholog); asphyxia neonatorum (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 10 58560433 58585230 - 22301074;30032202 116911280 MODEL JAAIVD010000005;XM_032915185;XM_032915186 XP_032771076;XP_032771077 presenilin-2 protein-coding 626041531 Ssrp1 structure specific recognition protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN nucleosome disassembly (ortholog); regulation of chromatin organization (ortholog); PARTICIPATES IN cisplatin drug pathway; histone modification pathway; RNA polymerase I transcription pathway; FOUND IN FACT complex (ortholog); nucleus (ortholog) 5 62407494 62417629 + 22301074;30032202 116901592 MODEL JAAIVD010000023;XM_032903613;XM_032903614;XM_032903615;XM_032903616;XM_032903617 XP_032759504;XP_032759505;XP_032759506;XP_032759507;XP_032759508 FACT complex subunit SSRP1 protein-coding 626041560 LOC116908852 tubulin beta-4B chain-like 9 33672535 33673904 - 116908852 MODEL JAAIVD010000002 pseudo 626041561 LOC116901764 uncharacterized LOC116901764 5 92886047 92898824 + 116901764 MODEL JAAIVD010000023;XR_004388019;XR_004388020 ncrna 626041569 Cop1 COP1 E3 ubiquitin ligase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); response to ionizing radiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); Golgi membrane (ortholog) 10 38538118 38664476 + 22301074;30032202 116911507 MODEL JAAIVD010000005;XM_032915494 XP_032771385 E3 ubiquitin-protein ligase COP1 protein-coding 626041593 Slc7a14 solute carrier family 7 member 14 ENCODES a protein that exhibits gamma-aminobutyric acid transmembrane transporter activity (ortholog); INVOLVED IN gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH blindness (ortholog); fundus dystrophy (ortholog); retinitis pigmentosa 68 (ortholog); FOUND IN cytosol (ortholog); lysosomal membrane (ortholog); nucleoplasm (ortholog) 3 125448663 125553427 - 22301074;30032202 116896983 MODEL JAAIVD010000012;XM_032898571;XM_032898572;XM_032898573 XP_032754462;XP_032754463;XP_032754464 probable cationic amino acid transporter protein-coding 626041611 LOC116895974 solute carrier family 7 member 13-like 3 156564282 156580304 + 22301074;30032202 116895974 MODEL JAAIVD010000012;XM_032897014 XP_032752905 protein-coding 626041618 Msh4 mutS homolog 4 INVOLVED IN female gamete generation (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); oligospermia (ortholog); FOUND IN chromosome (ortholog); condensed chromosome (ortholog); condensed nuclear chromosome (ortholog) 3 7738977 7786919 + 22301074;30032202 116895215 MODEL JAAIVD010000012;XM_032896546 XP_032752437 mutS protein homolog 4 protein-coding 626041642 LOC116883338 uncharacterized LOC116883338 14 52909808 52969610 + 116883338 MODEL JAAIVD010000009;XR_004385749 ncrna 626041646 Ldlrad4 low density lipoprotein receptor class A domain containing 4 ENCODES a protein that exhibits R-SMAD binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of SMAD protein signal transduction (ortholog); FOUND IN early endosome membrane (ortholog) 15 63008373 63211604 - 30032202 116884470 MODEL JAAIVD010000010;XM_032885581;XM_032885582;XM_032885583 XP_032741472;XP_032741473;XP_032741474 low-density lipoprotein receptor class A domain-containing protein 4 protein-coding 626041661 Lurap1 leucine rich adaptor protein 1 INVOLVED IN actomyosin structure organization (ortholog); cell migration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN actomyosin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 39819743 39828867 - 30032202 116898243 MODEL JAAIVD010000025;XM_032899597 XP_032755488 protein-coding 626041667 Myo18a myosin XVIIIA ENCODES a protein that exhibits actin filament binding (ortholog); ADP binding (ortholog); ATP binding (ortholog); INVOLVED IN actomyosin structure organization (ortholog); asymmetric Golgi ribbon formation (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); prostate cancer (ortholog); FOUND IN actomyosin (ortholog); brush border (ortholog); cytoskeleton (ortholog) 9 96460942 96547581 + 22301074 116910086 MODEL JAAIVD010000002;XM_032913902;XM_032913903;XM_032913904;XM_032913905;XM_032913906;XM_032913908 XP_032769793;XP_032769794;XP_032769795;XP_032769796;XP_032769797;XP_032769799 unconventional myosin-XVIIIa protein-coding 626041722 Hmcn2 hemicentin 2 FOUND IN basement membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) 5 4171519 4319730 - 22301074;30032202 116901165 MODEL JAAIVD010000023;XM_032902812 XP_032758703 hemicentin-2 protein-coding 626041823 Cmc4 C-X9-C motif containing 4 FOUND IN mitochondrion (ortholog) 15 34778954 34784799 - 30032202 116884474 MODEL JAAIVD010000010;XM_032885590;XM_032885591 XP_032741481;XP_032741482 cx9C motif-containing protein 4 protein-coding 626041833 Rimklb ribosomal modification protein rimK like family member B ENCODES a protein that exhibits citrate-L-glutamate ligase activity (ortholog); N-acetyl-L-aspartate-L-glutamate ligase activity (ortholog); FOUND IN cytoplasm (ortholog) 6 24615644 24649051 + 22301074;30032202 116903310 MODEL JAAIVD010000024;XM_032905740 XP_032761631 beta-citrylglutamate synthase B protein-coding 626041843 Tmem267 transmembrane protein 267 3 177283081 177289977 - 116895641 MODEL JAAIVD010000012;XM_032896844;XM_032896845;XM_032896846 XP_032752735;XP_032752736;XP_032752737 protein-coding 626041855 LOC116907238 aspartate--tRNA ligase, cytoplasmic-like 8 3593760 3595311 - 116907238 MODEL JAAIVD010000027 pseudo 626041856 Rrad RRAD, Ras related glycolysis inhibitor and calcium channel regulator INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); Cardiomegaly (ortholog); FOUND IN plasma membrane (ortholog); T-tubule (ortholog) 17 12898623 12901849 - 22301074;30032202 116886215 MODEL JAAIVD010000011;XM_032887605 XP_032743496 GTP-binding protein RAD protein-coding 626041864 Agxt alanine--glyoxylate and serine--pyruvate aminotransferase ENCODES a protein that exhibits alanine-glyoxylate transaminase activity (ortholog); amino acid binding (ortholog); identical protein binding (ortholog); INVOLVED IN glycine biosynthetic process, by transamination of glyoxylate (ortholog); glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); PARTICIPATES IN alanine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); Hyperoxaluria (ortholog); FOUND IN mitochondrial matrix (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) 4 165068429 165078389 + 2691502;2822418;30032202 116898282 MODEL JAAIVD010000003;X06357;XM_032899633 CAA29656;XP_032755524 serine pyruvate aminotransferase precursor (AA -22 to 392);serine--pyruvate aminotransferase protein-coding 626041879 LOC116889205 doublesex- and mab-3-related transcription factor C1-like X 95990852 95998081 - 116889205 MODEL JAAIVD010000014;XM_032890360 XP_032746251 protein-coding 626041892 LOC116903048 taste receptor type 2 member 103 6 15779846 15780784 + 22301074;30032202 116903048 MODEL JAAIVD010000024;XM_032905348 XP_032761239 protein-coding 626041895 Rae1 ribonucleic acid export 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN regulation of mitotic spindle organization (ortholog); FOUND IN fibrillar center (ortholog); mitotic spindle pole (ortholog); nuclear envelope (ortholog) 5 144973970 144989280 - 30032202 116902282 MODEL JAAIVD010000023;XM_032904712;XM_032904713 XP_032760603;XP_032760604 mRNA export factor protein-coding 626041914 LOC116901522 translation initiation factor IF-2-like 5 50855491 50884384 - 116901522 MODEL JAAIVD010000023;XM_032903498 XP_032759389 protein-coding 626041920 LOC116904355 TBC1 domain family member 20-like 6 77406176 77416733 + 116904355 MODEL JAAIVD010000024 pseudo 626041921 Gtf2f1 general transcription factor IIF subunit 1 ENCODES a protein that exhibits phosphatase activator activity (ortholog); promoter-specific chromatin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); response to virus (ortholog); transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription initiation pathway; FOUND IN cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 88383402 88392945 - 22301074;30032202 116899207 MODEL JAAIVD010000003;XM_032900795;XM_032900796 XP_032756686;XP_032756687 protein-coding 626041942 LOC116897091 general transcription factor IIH subunit 2 3 157868868 157895775 - 22301074;30032202 116897091 MODEL JAAIVD010000012;XM_032898727;XM_032898728 XP_032754618;XP_032754619 protein-coding 626041965 LOC116892727 olfactory receptor 5-like 2 179608239 179609201 + 22301074 116892727 MODEL JAAIVD010000001;XM_032894601 XP_032750492 protein-coding 626041968 Tnpo2 transportin 2 INVOLVED IN negative regulation of muscle cell differentiation (ortholog); protein import into nucleus (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual developmental disorder with hypotonia, impaired speech, and dysmorphic facies (ortholog); polycystic ovary syndrome (ortholog) 17 15234581 15255553 - 22301074;30032202 116886097 MODEL JAAIVD010000011;XM_032887422;XM_032887424;XM_032887425 XP_032743313;XP_032743315;XP_032743316 transportin-2 protein-coding 626042006 LOC116907285 U4/U6.U5 tri-snRNP-associated protein 1-like 8 17219981 17224426 - 116907285 MODEL JAAIVD010000027 pseudo 626042007 C4H2orf69 chromosome 4 C2orf69 homolog INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 53 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 4 132231699 132239660 + 30032202 116899401 MODEL JAAIVD010000003;XM_032901131 XP_032757022 UPF0565 protein C2orf69 homolog protein-coding 626042013 Rplp2 ribosomal protein lateral stalk subunit P2 ENCODES a protein that exhibits iron ion binding (ortholog); ribonucleoprotein complex binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to Thyroid stimulating hormone (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); synapse (ortholog) 2 8036087 8038438 - 1742361;22301074;30032202 116890866 MODEL JAAIVD010000001;X15098;XM_032891438;XM_032891439 CAA33201;XP_032747329;XP_032747330 60S acidic ribosomal protein P2 protein-coding 626042024 LOC116889452 U6 spliceosomal RNA X 24851993 24852096 - 116889452 MODEL JAAIVD010000014;XR_004386410 snrna 626042027 Soat2 sterol O-acyltransferase 2 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol metabolic process (ortholog); cholesterol storage (ortholog); PARTICIPATES IN kidney failure pathway; ASSOCIATED WITH arteriosclerosis (ortholog); celiac disease (ortholog); cholelithiasis (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 260911898 260925068 - 22301074;30032202 116890196 MODEL JAAIVD010000025;XM_032890931 XP_032746822 protein-coding 626042046 Slc16a9 solute carrier family 16 member 9 ENCODES a protein that exhibits carnitine transmembrane transporter activity (ortholog); creatine transmembrane transporter activity (ortholog); INVOLVED IN carnitine transmembrane transport (ortholog); creatine transmembrane transport (ortholog); urate metabolic process (ortholog); FOUND IN plasma membrane (ortholog) 18 16585223 16624375 - 22301074;30032202 116887515 MODEL JAAIVD010000013;XM_032889138 XP_032745029 monocarboxylate transporter 9 protein-coding 626042056 Nol11 nucleolar protein 11 INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); FOUND IN nucleolus (ortholog); t-UTP complex (ortholog) 9 71939125 71961689 + 22301074;30032202 116908986 MODEL JAAIVD010000002;XM_032912456;XR_004389043 XP_032768347 protein-coding 626042081 LOC116888839 60S ribosomal protein L34-like X 34603558 34603913 - 116888839 MODEL JAAIVD010000014 pseudo 626042082 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42449643 42449715 - 116884187 MODEL JAAIVD010000009 trna 626042083 LOC116895363 60S ribosomal protein L12-like 3 50221263 50221779 + 116895363 MODEL JAAIVD010000012 pseudo 626042084 Ric8a RIC8 guanine nucleotide exchange factor A ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); basement membrane organization (ortholog); cell migration involved in gastrulation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 8624201 8630075 - 30032202 116890898 MODEL JAAIVD010000001;XM_032891518 XP_032747409 synembryn-A protein-coding 626042098 Plgrkt plasminogen receptor with a C-terminal lysine INVOLVED IN positive regulation of plasminogen activation (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 2 29428809 29441493 - 22301074;30032202 116891073 MODEL JAAIVD010000001;XM_032891778 XP_032747669 plasminogen receptor (KT) protein-coding 626042108 Traf3ip1 TRAF3 interacting protein 1 INVOLVED IN cilium assembly (ortholog); dorsal/ventral neural tube patterning (ortholog); embryonic camera-type eye development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); Ellis-Van Creveld syndrome (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 163478716 163515984 + 30032202 116899641 MODEL JAAIVD010000003;XM_032901638;XM_032901639;XM_032901640;XM_032901641;XM_032901642;XM_032901643 XP_032757529;XP_032757530;XP_032757531;XP_032757532;XP_032757533;XP_032757534 TRAF3-interacting protein 1 protein-coding 626042138 LOC116899780 U6 spliceosomal RNA 4 104478808 104478912 + 116899780 MODEL JAAIVD010000003;XR_004387790 snrna 626042141 LOC116908672 uncharacterized LOC116908672 9 35543371 35613594 - 116908672 MODEL JAAIVD010000002;XR_004389010;XR_004389011 ncrna 626042148 Trip4 thyroid hormone receptor interactor 4 ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); Congenital Muscular Dystrophy, Davignon-Chauveau Type (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); neuromuscular junction (ortholog) 8 60141988 60219748 - 22301074;30032202 116906646 MODEL JAAIVD010000027;XM_032909423 XP_032765314 activating signal cointegrator 1 protein-coding 626042166 LOC116910078 keratin-associated protein 4-1-like 9 54603225 54603719 - 22301074;30032202 116910078 MODEL JAAIVD010000002;XM_032913894 XP_032769785 protein-coding 626042169 Mapk13 mitogen-activated protein kinase 13 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to anisomycin (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH cholestasis (ortholog) 18 5082851 5091814 - 22301074;30032202 116887536 MODEL JAAIVD010000013;XM_032889169 XP_032745060 protein-coding 626042185 LOC116900894 olfactory receptor 4A5-like 5 71267178 71275889 - 116900894 MODEL JAAIVD010000023 pseudo 626042186 LOC116909416 olfactory receptor 1361-like 9 38607856 38608795 - 22301074;30032202 116909416 MODEL JAAIVD010000002;XM_032912983 XP_032768874 protein-coding 626042189 Zbtb37 zinc finger and BTB domain containing 37 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH cholesteatoma (ortholog) 10 40300497 40324296 - 22301074;30032202 116911031 MODEL JAAIVD010000005;XM_032914769;XM_032914770;XM_032914771;XM_032914773 XP_032770660;XP_032770661;XP_032770662;XP_032770664 zinc finger and BTB domain-containing protein 37 protein-coding 626042202 LOC116900861 olfactory receptor 1102-like 5 64158250 64159240 + 22301074;30032202 116900861 MODEL JAAIVD010000023;XM_032902548 XP_032758439 protein-coding 626042205 Tor2a torsin family 2 member A ENCODES a protein that exhibits hormone activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); positive regulation of calcium ion transmembrane transport (ortholog); positive regulation of cAMP-mediated signaling (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) 5 2876646 2881300 - 22301074;30032202 116901133 MODEL JAAIVD010000023;XM_032902731;XM_032902732 XP_032758622;XP_032758623 prosalusin protein-coding 626042219 Trappc1 trafficking protein particle complex subunit 1 FOUND IN TRAPP complex (ortholog) 9 48934941 48936761 + 22301074;30032202 116909911 MODEL JAAIVD010000002;XM_032913663 XP_032769554 trafficking protein particle complex 1 protein-coding 626042228 LOC116893964 olfactory receptor 2AT4-like 2 98048290 98049255 + 22301074 116893964 MODEL JAAIVD010000001;XM_032895682 XP_032751573 protein-coding 626042231 LOC116890426 U7 small nuclear RNA 1 69100942 69101045 + 116890426 MODEL JAAIVD010000025 pseudo 626042232 LOC116911779 elongation factor 1-gamma-like 10 56932861 56934865 + 116911779 MODEL JAAIVD010000005 pseudo 626042233 Rec8 REC8 meiotic recombination protein INVOLVED IN double-strand break repair via homologous recombination (ortholog); fertilization (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH azoospermia (ortholog); melanoma (ortholog); primary ovarian insufficiency (ortholog); FOUND IN condensed chromosome (ortholog); condensed chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog) 12 69380818 69388975 - 22301074;30032202 116913147 MODEL JAAIVD010000007;XM_032917353;XM_032917354;XM_032917355;XM_032917357 XP_032773244;XP_032773245;XP_032773246;XP_032773248 meiotic recombination protein REC8 homolog protein-coding 626042267 Smim24 small integral membrane protein 24 1 153494404 153497595 - 116904293 MODEL JAAIVD010000025;XM_032907219 XP_032763110 protein-coding 626042275 LOC116915045 extensin-like 1 195117572 195118831 + 116915045 MODEL JAAIVD010000025;XM_032919491 XP_032775382 protein-coding 626042278 Usf1 upstream transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); glucose mediated signaling pathway (ortholog); ASSOCIATED WITH cardiovascular system disease (ortholog); familial combined hyperlipidemia (ortholog); Hyperlipidemia, Combined, 1 (ortholog); FOUND IN chromatin (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 10 50581157 50588760 + 22301074;30032202 116911320 MODEL JAAIVD010000005;XM_032915234;XM_032915236 XP_032771125;XP_032771127 upstream stimulatory factor 1 protein-coding 626042294 Map3k4 mitogen-activated protein kinase kinase kinase 4 ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); intracellular signal transduction (ortholog); male germ-line sex determination (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Endometrial Neoplasms (ortholog); nephroblastoma (ortholog); FOUND IN cytoplasm (ortholog) 2 190970127 191058956 - 22301074 116892823 MODEL JAAIVD010000001;XM_032894708 XP_032750599 protein-coding 626042325 LOC116905715 40S ribosomal protein S15a-like 7 71177204 71177607 - 116905715 MODEL JAAIVD010000026 pseudo 626042326 Pold1 DNA polymerase delta 1, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); chromatin binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN base-excision repair, gap-filling (ortholog); cellular response to UV (ortholog); DNA biosynthetic process (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH bile duct cancer (ortholog); breast cancer (ortholog); colon cancer (ortholog); FOUND IN aggresome (ortholog); chromosome, telomeric region (ortholog); cytosol (ortholog) 2 154984682 155000760 + 22301074;30032202 116892206 MODEL JAAIVD010000001;XM_032893760 XP_032749651 DNA polymerase delta catalytic subunit protein-coding 626042357 Six1 SIX homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cellular response to 3,3',5-triiodo-L-thyronine (ortholog); ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 23 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 87317308 87322413 - 22301074;30032202 116905768 MODEL JAAIVD010000026;XM_032908736 XP_032764627 homeobox protein SIX1 protein-coding 626042363 LOC116895684 succinate dehydrogenase cytochrome b560 subunit, mitochondrial-like 3 201043731 201044238 - 116895684 MODEL JAAIVD010000012 pseudo 626042364 Gpr155 G protein-coupled receptor 155 ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to cholesterol (ortholog); cellular response to nutrient levels (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hepatomegaly (ortholog); FOUND IN lysosomal membrane (ortholog) 5 50691377 50737971 - 22301074 116901521 MODEL JAAIVD010000023;XM_032903497 XP_032759388 integral membrane protein GPR155 protein-coding 626042385 LOC116884366 igE-binding protein-like 15 41408812 41410361 + 22301074 116884366 MODEL JAAIVD010000010;XM_032885491 XP_032741382 protein-coding 626042390 Cerk ceramide kinase ENCODES a protein that exhibits ceramide kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN ceramide metabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 1 255482761 255525447 - 22301074 116914759 MODEL JAAIVD010000025;XM_032919212 XP_032775103 protein-coding 626042407 Tle6 TLE family member 6, subcortical maternal complex member ENCODES a protein that exhibits structural constituent of cytoplasmic lattice (ortholog); INVOLVED IN actin filament organization (ortholog); embryonic process involved in female pregnancy (ortholog); endoplasmic reticulum localization (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 15 (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic lattice (ortholog) 1 153291271 153300258 + 22301074;30032202 116906351 MODEL JAAIVD010000025;XM_032909218 XP_032765109 transducin-like enhancer protein 6 protein-coding 626042423 Stx18 syntaxin 18 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN endoplasmic reticulum membrane organization (ortholog); positive regulation of ER to Golgi vesicle-mediated transport (ortholog); positive regulation of organelle assembly (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 67052076 67142164 - 22301074;30032202 116912790 MODEL JAAIVD010000006;XM_032916952 XP_032772843 syntaxin-18 protein-coding 626042438 LOC116898178 60S ribosomal protein L31-like 4 128995954 128996387 - 22301074;30032202 116898178 MODEL JAAIVD010000003;XM_032899543 XP_032755434 protein-coding 626042443 LOC116890620 U1 spliceosomal RNA 1 112030310 112030442 + 116890620 MODEL JAAIVD010000025 pseudo 626042444 Mast2 microtubule associated serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); microtubule binding (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of interleukin-12 production (ortholog); spermatid differentiation (ortholog); FOUND IN microtubule cytoskeleton (ortholog) 1 39977463 40118069 - 22301074;30032202 116898296 MODEL JAAIVD010000025;XM_032899646;XM_032899649;XM_032899653;XM_032899657 XP_032755537;XP_032755540;XP_032755544;XP_032755548 microtubule-associated serine/threonine-protein kinase 2 protein-coding 626042484 Ssr2 signal sequence receptor subunit 2 INVOLVED IN in utero embryonic development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 3 64962040 64970688 - 22301074;30032202 116896679 MODEL JAAIVD010000012;XM_032898060 XP_032753951 translocon-associated protein subunit beta protein-coding 626042494 LOC116892998 retinoic acid early-inducible protein 1-gamma-like 2 222014394 222019574 + 30032202 116892998 MODEL JAAIVD010000001;XM_032894960 XP_032750851 protein-coding 626042502 LOC116902460 U6 spliceosomal RNA 5 99582561 99582667 - 116902460 MODEL JAAIVD010000023;XR_004388079 snrna 626042505 LOC116886581 proteasome assembly chaperone 4-like 17 1643540 1645579 + 116886581 MODEL JAAIVD010000011 pseudo 626042506 Pabir2 PABIR family member 2 X 115982712 116008801 + 30032202 116888890 MODEL JAAIVD010000014;XM_032890152 XP_032746043 Fam122b family with sequence similarity 122B;protein FAM122B protein-coding 626042519 LOC116895698 60S ribosomal protein L7a-like 3 210022657 210023406 - 116895698 MODEL JAAIVD010000012;XM_032896897 XP_032752788 protein-coding 626042523 S100a11 S100 calcium binding protein A11 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); protein homodimerization activity (ortholog); S100 protein binding (ortholog); INVOLVED IN positive regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); ruffle (ortholog) 3 121141861 121147113 - 22301074;30032202 116895543 MODEL JAAIVD010000012;XM_032896786 XP_032752677 protein S100-A11 protein-coding 626042530 LOC116909414 lipase maturation factor 1 9 2921999 2929542 + 22301074;30032202 116909414 MODEL JAAIVD010000002;XM_032912980;XM_032912982 XP_032768871;XP_032768873 protein-coding 626042542 LOC116895349 pancreatic alpha-amylase-like 3 46137629 46146437 + 116895349 MODEL JAAIVD010000012 pseudo 626042543 Rmc1 regulator of MON1-CCZ1 INVOLVED IN regulation of autophagy (ortholog); FOUND IN late endosome membrane (ortholog); Mon1-Ccz1 complex (ortholog) 15 31472512 31492636 - 22301074;30032202 116884259 MODEL JAAIVD010000010;XM_032885344 XP_032741235 regulator of MON1-CCZ1 complex protein-coding 626042567 LOC116884630 NXPE family member 3-like 15 71487613 71488306 + 116884630 MODEL JAAIVD010000010;XM_032885771 XP_032741662 protein-coding 626042572 LOC116888001 KAT8 regulatory NSL complex subunit 2-like X 75711488 75713670 - 116888001 MODEL JAAIVD010000014 pseudo 626042573 LOC116888083 zinc finger protein ZPR1-like X 91323703 91325180 - 116888083 MODEL JAAIVD010000014 pseudo 626042574 Galp galanin like peptide INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); behavioral response to starvation (ortholog); regulation of appetite (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); obesity (ortholog) 2 179913276 179931292 - 22301074;30032202 116892735 MODEL JAAIVD010000001;XM_032894608 XP_032750499 galanin-like peptide protein-coding 626042583 LOC116887721 60S ribosomal protein L21-like 1 56335079 56335530 - 22301074;30032202 116887721 MODEL JAAIVD010000025;XM_032889318 XP_032745209 protein-coding 626042587 Rock2 Rho associated coiled-coil containing protein kinase 2 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); protease binding (ortholog); protein kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); aortic valve morphogenesis (ortholog); blood vessel diameter maintenance (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 7 36704377 36798321 + 22301074;30032202 116904895 MODEL JAAIVD010000026;XM_032907502 XP_032763393 rho-associated protein kinase 2 protein-coding 626042624 Tmem265 transmembrane protein 265 2 74337658 74341489 - 22301074 116891469 MODEL JAAIVD010000001;XM_032892566 XP_032748457 protein-coding 626042631 LOC116915010 KAT8 regulatory NSL complex subunit 2-like 13 33595719 33596931 - 116915010 MODEL JAAIVD010000008 pseudo 626042632 Slc35f6 solute carrier family 35 member F6 INVOLVED IN negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN cytosol (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 7 23420356 23431350 - 22301074;30032202 116906004 MODEL JAAIVD010000026;XM_032909043 XP_032764934 protein-coding 626042642 LOC116908887 keratin, type I cytoskeletal 14 9 54952535 54956503 - 22301074;30032202 116908887 MODEL JAAIVD010000002;XM_032912333;XM_032912334 XP_032768224;XP_032768225 protein-coding 626042656 Snx30 sorting nexin family member 30 INVOLVED IN positive regulation of autophagosome assembly (ortholog); protein transport (ortholog); FOUND IN early endosome (ortholog) 1 91516042 91607972 - 22301074 116901463 MODEL JAAIVD010000025;XM_032903415 XP_032759306 sorting nexin-30 protein-coding 626042669 Polr3f RNA polymerase III subunit F ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH immunodeficiency 101 (ortholog); FOUND IN RNA polymerase III complex (ortholog) 5 124170871 124187328 + 22301074;30032202 116902047 MODEL JAAIVD010000023;XM_032904332;XR_004388036 XP_032760223 DNA-directed RNA polymerase III subunit RPC6 protein-coding 626042685 Castor2 cytosolic arginine sensor for mTORC1 subunit 2 ENCODES a protein that exhibits arginine binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog) 16 19914139 19953970 - 30032202 116885671 MODEL JAAIVD010000004;XM_032886981 XP_032742872 protein-coding 626042698 Hspa5 heat shock protein family A (Hsp70) member 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to antibiotic (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Lung Injury (ortholog); asbestosis (ortholog); FOUND IN cell surface (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 5 875731 880233 - 22301074;30032202 116901112 MODEL JAAIVD010000023;XM_032902680 XP_032758571 endoplasmic reticulum chaperone BiP protein-coding 626042711 Gsg1l2 GSG1 like 2 9 47386737 47401157 + 30032202 116909102 MODEL JAAIVD010000002;XM_032912576 XP_032768467 germ cell-specific gene 1-like protein 2 protein-coding 626042718 LOC116891006 guanine nucleotide-binding protein subunit alpha-14 2 16347493 16650330 + 22301074;30032202 116891006 MODEL JAAIVD010000001;XM_032891687 XP_032747578 protein-coding 626042729 LOC116914611 protein arginine methyltransferase NDUFAF7, mitochondrial-like 13 40383328 40384636 - 116914611 MODEL JAAIVD010000008 pseudo 626042730 LOC116904717 small nucleolar RNA SNORA17 6 14293042 14293169 - 116904717 MODEL JAAIVD010000024;XR_004388411 snorna 626042733 Spryd4 SPRY domain containing 4 FOUND IN mitochondrion (ortholog); nucleus (ortholog) 1 155682810 155702332 - 22301074 116905935 MODEL JAAIVD010000025;XM_032908929;XM_032908935 XP_032764820;XP_032764826 SPRY domain-containing protein 4 protein-coding 626042744 LOC116906311 U6 spliceosomal RNA 7 37720687 37720793 + 116906311 MODEL JAAIVD010000026;XR_004388599 snrna 626042747 Rpl3l ribosomal protein L3 like ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN negative regulation of myotube differentiation (ortholog); regulation of striated muscle tissue development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy 2D (ortholog); FOUND IN cytosolic large ribosomal subunit (ortholog) 9 2023036 2023838 + 22301074;30032202 116909985 MODEL JAAIVD010000002;XM_032913768 XP_032769659 60S ribosomal protein L3-like protein-coding 626042754 Ark2c arkadia (RNF111) C-terminal like ring finger ubiquitin ligase 2C ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN axonogenesis (ortholog); forelimb morphogenesis (ortholog); innervation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) 15 54520208 54632761 + 22301074;30032202 116884587 MODEL JAAIVD010000010;XM_032885731 XP_032741622 Rnf165 E3 ubiquitin-protein ligase RNF165;ring finger protein 165 protein-coding 626042766 LOC116884936 nucleolar protein 4-like 15 20951276 21077551 + 116884936 MODEL JAAIVD010000010;XM_032886148 XP_032742039 protein-coding 626042776 LOC116888804 pleckstrin homology domain-containing family F member 1-like X 115178928 115179854 - 116888804 MODEL JAAIVD010000014 pseudo 626042777 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41764641 41764722 + 116884213 MODEL JAAIVD010000009 trna 626042778 LOC116895739 zinc finger and BTB domain-containing protein 7B-like 3 33502030 33503070 - 116895739 MODEL JAAIVD010000012 pseudo 626042779 LOC116887764 U6 spliceosomal RNA 18 24448799 24448899 - 116887764 MODEL JAAIVD010000013 pseudo 626042780 Serpini1 serpin family I member 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN positive regulation of neuron projection development (ortholog); ASSOCIATED WITH familial encephalopathy with neuroserpin inclusion bodies (ortholog); genetic disease (ortholog); Nervous System Malformations (ortholog); FOUND IN cytoplasmic vesicle lumen (ortholog); extracellular space (ortholog); neuronal cell body (ortholog) 3 78255551 78338204 - 30032202 116896776 MODEL JAAIVD010000012;XM_032898235;XM_032898236 XP_032754126;XP_032754127 neuroserpin protein-coding 626042799 LOC116896128 60S ribosomal protein L36a-like 3 3621078 3621379 + 116896128 MODEL JAAIVD010000012 pseudo 626042800 LOC116908309 zinc finger protein OZF-like 8 16629754 16660050 + 30032202 116908309 MODEL JAAIVD010000027;XM_032911589;XM_032911590;XM_032911591;XM_032911592;XM_032911593 XP_032767480;XP_032767481;XP_032767482;XP_032767483;XP_032767484 zinc finger protein 426-like protein-coding 626042823 LOC116895740 39S ribosomal protein L54, mitochondrial-like 3 34313365 34315956 - 116895740 MODEL JAAIVD010000012 pseudo 626042824 Stk35 serine/threonine kinase 35 FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 5 108531480 108562144 + 22301074;30032202 116901961 MODEL JAAIVD010000023;XM_032904200;XM_032904201;XM_032904202 XP_032760091;XP_032760092;XP_032760093 serine/threonine-protein kinase 35 protein-coding 626042839 LOC116912566 uncharacterized LOC116912566 11 10642115 10645979 - 116912566 MODEL JAAIVD010000006;XR_004389469 ncrna 626042844 Ubap1 ubiquitin associated protein 1 ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 80 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); ESCRT I complex (ortholog) 1 4155860 4196324 - 30032202 116891391 MODEL JAAIVD010000025;XM_032892414 XP_032748305 ubiquitin-associated protein 1 protein-coding 626042855 Bfsp2 beaded filament structural protein 2 ENCODES a protein that exhibits structural constituent of eye lens (ortholog); INVOLVED IN cell maturation (ortholog); cytoskeleton organization (ortholog); intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 12 multiple types (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog) 8 94708727 94778201 - 22301074;30032202 116908255 MODEL JAAIVD010000027;XM_032911510 XP_032767401 phakinin protein-coding 626042867 Umodl1 uromodulin like 1 INVOLVED IN adipose tissue development (ortholog); cellular response to gonadotropin-releasing hormone (ortholog); ectopic germ cell programmed cell death (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 18 2862130 2919791 - 22301074;30032202 116887081 MODEL JAAIVD010000013;XM_032888591 XP_032744482 uromodulin-like 1 protein-coding 626042892 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41834552 41834624 + 116884222 MODEL JAAIVD010000009 trna 626042893 Galnt10 polypeptide N-acetylgalactosaminyltransferase 10 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); protein O-linked glycosylation via N-acetyl-galactosamine (ortholog) 9 40443663 40513267 - 30032202 116908507 MODEL JAAIVD010000002;XM_032911681 XP_032767572 protein-coding 626042908 LOC116902710 taste receptor type 2 member 109 6 16589560 16590522 + 22301074;30032202 116902710 MODEL JAAIVD010000024;XM_032905064 XP_032760955 protein-coding 626042911 Itk IL2 inducible T cell kinase ENCODES a protein that exhibits non-membrane spanning protein tyrosine kinase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); gamma-delta T cell activation (ortholog); NK T cell differentiation (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH autoimmune lymphoproliferative syndrome (ortholog); Chediak-Higashi syndrome (ortholog); genetic disease (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); nucleus (ortholog) 9 29039947 29100661 - 22301074;30032202 116908998 MODEL JAAIVD010000002;XM_032912466 XP_032768357 tyrosine-protein kinase ITK/TSK protein-coding 626042932 LOC116912807 uncharacterized LOC116912807 11 43158910 43163853 + 116912807 MODEL JAAIVD010000006;XR_004389480 ncrna 626042938 LOC116906464 small nucleolar RNA SNORA17 7 64065259 64065388 + 116906464 MODEL JAAIVD010000026;XR_004388719 snorna 626042941 LOC116893211 protein tyrosine phosphatase type IVA 1-like 2 111669402 111669917 - 116893211 MODEL JAAIVD010000001 pseudo 626042942 S100a5 S100 calcium binding protein A5 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH middle cerebral artery infarction (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) 3 63005647 63007645 - 22301074;30032202 116895420 MODEL JAAIVD010000012;XM_032896702 XP_032752593 protein S100-A5 protein-coding 626042948 LOC116888764 serine/arginine-rich splicing factor 5-like X 30249362 30250176 + 116888764 MODEL JAAIVD010000014 pseudo 626042949 Pigq phosphatidylinositol glycan anchor biosynthesis class Q ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) 9 3186884 3203145 - 22301074;30032202 116908913 MODEL JAAIVD010000002;XM_032912367;XM_032912368;XM_032912369 XP_032768258;XP_032768259;XP_032768260 phosphatidylinositol N-acetylglucosaminyltransferase subunit Q protein-coding 626042970 LOC116902536 small nucleolar RNA SNORA42/SNORA80 family 5 49432178 49432311 - 116902536 MODEL JAAIVD010000023;XR_004388139 snorna 626042973 Nmrk1 nicotinamide riboside kinase 1 ENCODES a protein that exhibits ribosylnicotinamide kinase activity (ortholog); ribosylnicotinate kinase activity (ortholog); INVOLVED IN NAD+ biosynthetic process via the salvage pathway (ortholog); NADP+ biosynthetic process (ortholog); nicotinamide riboside metabolic process (ortholog); PARTICIPATES IN niacin metabolic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; FOUND IN cytosol (ortholog) 2 18638365 18659669 + 30032202 116892245 MODEL JAAIVD010000001;XM_032893814 XP_032749705 protein-coding 626042985 Zkscan1 zinc finger with KRAB and SCAN domains 1 ASSOCIATED WITH intellectual disability (ortholog); prostate cancer (ortholog) 16 15462373 15483392 + 30032202 116885697 MODEL JAAIVD010000004;XM_032887004;XM_032887005;XR_004386036 XP_032742895;XP_032742896 zinc finger protein with KRAB and SCAN domains 1 protein-coding 626042999 LOC116894211 olfactory receptor 502-like 2 106510762 106511706 + 22301074;30032202 116894211 MODEL JAAIVD010000001;XM_032895924 XP_032751815 protein-coding 626043002 LOC116899980 40S ribosomal protein S12-like 5 134667075 134668327 + 22301074;30032202 116899980 MODEL JAAIVD010000023;XM_032901798 XP_032757689 protein-coding 626043006 Snx8 sorting nexin 8 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN early endosome membrane (ortholog); retromer complex (ortholog) 16 12807504 12854824 + 22301074;30032202 116885631 MODEL JAAIVD010000004;XM_032886934;XM_032886935;XM_032886936 XP_032742825;XP_032742826;XP_032742827 sorting nexin-8 protein-coding 626043026 LOC116914889 neutrophil antibiotic peptide NP-4 13 64807178 64809864 - 22301074;30032202 116914889 MODEL JAAIVD010000008;XM_032919333 XP_032775224 protein-coding 626043033 LOC116897813 T-kininogen 1-like 4 7711572 7733261 - 22301074;30032202 116897813 MODEL JAAIVD010000003;XM_032899229 XP_032755120 protein-coding 626043047 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50214130 50214201 - 116911916 MODEL JAAIVD010000005 trna 626043048 Zfp91 ZFP91 zinc finger protein, atypical E3 ubiquitin ligase ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN activation of NF-kappaB-inducing kinase activity (ortholog); protein K63-linked ubiquitination (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Hypothermia (ortholog); stomach cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 12806133 12840423 - 30032202 116890995 MODEL JAAIVD010000001;XM_032891671;XM_032891673 XP_032747562;XP_032747564 E3 ubiquitin-protein ligase ZFP91 protein-coding 626043069 Nes nestin ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); INVOLVED IN cell projection morphogenesis (ortholog); G2/M transition of mitotic cell cycle (ortholog); negative regulation of catalytic activity (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); brain infarction (ortholog); brain ischemia (ortholog); FOUND IN cytoplasm (ortholog); intermediate filament (ortholog); intermediate filament cytoskeleton (ortholog) 3 65577513 65586531 - 30032202 116896706 MODEL JAAIVD010000012;XM_032898121 XP_032754012 protein-coding 626043077 P2ry12 purinergic receptor P2Y12 ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled ADP receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN clopidogrel pharmacodynamics pathway; clopidogrel pharmacokinetics pathway; ticlopidine pharmacodynamics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Lung Injury (ortholog); arteriosclerosis (ortholog); FOUND IN basal plasma membrane (ortholog); caveola (ortholog); cell body membrane (ortholog) 3 95684104 95687961 + 22301074;30032202 116896839 MODEL JAAIVD010000012;XM_032898343 XP_032754234 P2Y purinoceptor 12 protein-coding 626043083 LOC116913082 uncharacterized LOC116913082 12 48027908 48028649 + 116913082 MODEL JAAIVD010000007;XR_004389591 ncrna 626043088 Smpx small muscle protein X-linked ASSOCIATED WITH Distal Myopathy 7 (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN contractile muscle fiber (ortholog); costamere (ortholog); cytoplasm (ortholog) X 35378383 35426425 + 30032202 116888674 MODEL JAAIVD010000014;XM_032889973 XP_032745864 small muscular protein protein-coding 626043097 LOC116894590 vomeronasal type-1 receptor 4-like 2 181243688 181244659 - 22301074;30032202 116894590 MODEL JAAIVD010000001;XM_032896309 XP_032752200 protein-coding 626043101 Gpr26 G protein-coupled receptor 26 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 2 69827811 69864424 - 22301074;30032202 116891401 MODEL JAAIVD010000001;XM_032892425;XM_032892427 XP_032748316;XP_032748318 G-protein coupled receptor 26 protein-coding 626043112 LOC116911006 cytochrome c oxidase subunit 6C-2-like 10 49640436 49640788 + 116911006 MODEL JAAIVD010000005 pseudo 626043113 LOC116913686 60S ribosomal protein L7-like 12 65124000 65124756 + 116913686 MODEL JAAIVD010000007 pseudo 626043114 Pkd2l1 polycystin 2 like 1, transient receptor potential cation channel ENCODES a protein that exhibits alpha-actinin binding (ortholog); calcium channel activity (ortholog); calcium ion binding (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to pH (ortholog); detection of chemical stimulus involved in sensory perception of sour taste (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); calcium channel complex (ortholog); cation channel complex (ortholog) 2 43678657 43714462 - 22301074;30032202 116893801 MODEL JAAIVD010000001;XM_032895505 XP_032751396 polycystic kidney disease 2-like 1 protein protein-coding 626043131 LOC116895119 U4 spliceosomal RNA 2 143900664 143900800 + 116895119 MODEL JAAIVD010000001;XR_004387266 snrna 626043134 Larp6 La ribonucleoprotein 6, translational regulator ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); myosin binding (ortholog); RNA stem-loop binding (ortholog); INVOLVED IN positive regulation of collagen biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 55010074 55031917 + 22301074;30032202 116907245 MODEL JAAIVD010000027;XM_032910204;XM_032910205 XP_032766095;XP_032766096 la-related protein 6 protein-coding 626043145 LOC116913024 U2 spliceosomal RNA 11 20491339 20491529 - 116913024 MODEL JAAIVD010000006;XR_004389571 snrna 626043148 Id4 inhibitor of DNA binding 4, HLH protein ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN brain development (ortholog); central nervous system myelination (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 67253237 67256657 + 22301074;30032202 116883504 MODEL JAAIVD010000009;XM_032884672 XP_032740563 DNA-binding protein inhibitor ID-4 protein-coding 626043155 LOC116906120 sorting nexin-7-like 7 84087955 84091173 + 116906120 MODEL JAAIVD010000026 pseudo 626043156 LOC116910904 mitochondrial import inner membrane translocase subunit Tim23-like 10 48814024 48814680 + 116910904 MODEL JAAIVD010000005 pseudo 626043157 KEG97_r01 MT 1094 2662 + 64988237 rrna 626043158 Acyp2 acylphosphatase 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); FOUND IN mitochondrion (ortholog) 11 98016696 98169825 - 22301074;30032202 116912880 MODEL JAAIVD010000006;XM_032917117;XM_032917118;XM_032917119 XP_032773008;XP_032773009;XP_032773010 acylphosphatase-2 protein-coding 626043174 LOC116897473 U7 small nuclear RNA 3 59585377 59585439 - 116897473 MODEL JAAIVD010000012;XR_004387499 snrna 626043177 LOC116912305 uncharacterized LOC116912305 1 241096939 241102499 + 116912305 MODEL JAAIVD010000025;XR_004389441;XR_004389442;XR_004389443 ncrna 626043186 Tgm4 transglutaminase 4 INVOLVED IN mating plug formation (ortholog); ASSOCIATED WITH essential tremor (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) 8 114175104 114203175 + 22301074;30032202 116908015 MODEL JAAIVD010000027;XM_032911274 XP_032767165 protein-glutamine gamma-glutamyltransferase 4 protein-coding 626043204 Igsf8 immunoglobulin superfamily member 8 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); positive regulation of cell migration (ortholog); regulation of cell motility (ortholog); FOUND IN axon (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); membrane (ortholog) 10 51422131 51430324 + 116911008 MODEL JAAIVD010000005;XM_032914735;XM_032914736;XM_032914737 XP_032770626;XP_032770627;XP_032770628 protein-coding 626043224 LOC116903034 putative vomeronasal receptor-like protein 4 6 159314767 159315618 - 22301074;30032202 116903034 MODEL JAAIVD010000024;XM_032905338 XP_032761229 protein-coding 626043227 Klhdc7a kelch domain containing 7A ASSOCIATED WITH Breast Neoplasms (ortholog) 1 18214067 18226179 + 22301074 116893622 MODEL JAAIVD010000025;XM_032895339 XP_032751230 kelch domain-containing protein 7A protein-coding 626043233 Hmga1 high mobility group AT-hook 1 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagy (ortholog); B cell differentiation (ortholog); base-excision repair (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH hyperglycemia (ortholog); Insulin Resistance (ortholog); leiomyosarcoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); male germ cell nucleus (ortholog) 18 6286781 6294377 - 22301074;30032202 116887063 MODEL JAAIVD010000013;XM_032888558;XM_032888559;XM_032888561;XM_032888562;XM_032888563 XP_032744449;XP_032744450;XP_032744452;XP_032744453;XP_032744454 high mobility group protein HMG-I/HMG-Y protein-coding 626043256 Dnase2b deoxyribonuclease 2 beta ENCODES a protein that exhibits deoxyribonuclease II activity (ortholog); DNA endonuclease activity (ortholog); ASSOCIATED WITH cataract (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 3 14311089 14326591 + 22301074;30032202 116895290 MODEL JAAIVD010000012;XM_032896602;XM_032896603 XP_032752493;XP_032752494 deoxyribonuclease-2-beta protein-coding 626043272 Mitd1 microtubule interacting and trafficking domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN midbody abscission (ortholog); mitotic cytokinesis (ortholog); multivesicular body sorting pathway (ortholog); FOUND IN membrane (ortholog); midbody (ortholog) 4 114078829 114089538 - 30032202 116899304 MODEL JAAIVD010000003;XM_032900962;XM_032900963;XM_032900964 XP_032756853;XP_032756854;XP_032756855 MIT domain-containing protein 1 protein-coding 626043292 LOC116889769 zinc finger protein 665-like 116889769 MODEL JAAIVD010000421;XM_032890628 XP_032746519 protein-coding 626043293 LOC116894035 olfactory receptor 51G2-like 2 102119431 102120402 + 22301074 116894035 MODEL JAAIVD010000001;XM_032895754 XP_032751645 protein-coding 626043296 LOC116900929 Ig kappa chain V-VI region NQ2-6.1-like 5 79178189 79187828 - 116900929 MODEL JAAIVD010000023 pseudo 626043297 Fzd10 frizzled class receptor 10 ENCODES a protein that exhibits Wnt receptor activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); non-canonical Wnt signaling pathway (ortholog); positive regulation of JNK cascade (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN cell surface (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 16 25361349 25364550 - 30032202 116885768 MODEL JAAIVD010000004;XM_032887084 XP_032742975 frizzled-10 protein-coding 626043302 LOC116894826 U4 spliceosomal RNA 2 104802594 104802744 - 116894826 MODEL JAAIVD010000001 pseudo 626043303 LOC116893497 interferon alpha-C-like 1 65588970 65589548 + 22301074;30032202 116893497 MODEL JAAIVD010000025;XM_032895256 XP_032751147 protein-coding 626043306 Cadm4 cell adhesion molecule 4 ENCODES a protein that exhibits protein phosphatase binding (ortholog); receptor tyrosine kinase binding (ortholog); vascular endothelial growth factor receptor 1 binding (ortholog); INVOLVED IN negative regulation of peptidyl-threonine phosphorylation (ortholog); negative regulation of peptidyl-tyrosine phosphorylation (ortholog); negative regulation of protein phosphorylation (ortholog); FOUND IN cell leading edge (ortholog); cell-cell contact zone (ortholog); synaptic membrane (ortholog) 2 170208516 170230515 - 30032202 116892488 MODEL JAAIVD010000001;XM_032894223 XP_032750114 protein-coding 626043319 Nox4 NADPH oxidase 4 ENCODES a protein that exhibits heme binding (ortholog); modified amino acid binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN bone resorption (ortholog); cardiac muscle cell differentiation (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Aneurysm (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); cell periphery (ortholog); endoplasmic reticulum (ortholog) 2 113891688 114044061 - 30032202 116894239 MODEL JAAIVD010000001;XM_032895944;XM_032895945 XP_032751835;XP_032751836 protein-coding 626043343 Bbx BBX high mobility group box domain containing ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone development (ortholog) 4 34580889 34820298 - 30032202 116898889 MODEL JAAIVD010000003;XM_032900273;XM_032900274;XM_032900275;XM_032900276;XM_032900277;XM_032900278;XM_032900279;XM_032900280;XM_032900281;XM_032900282;XM_032900284;XM_032900285;XM_032900286 XP_032756164;XP_032756165;XP_032756166;XP_032756167;XP_032756168;XP_032756169;XP_032756170;XP_032756171;XP_032756172;XP_032756173;XP_032756175;XP_032756176;XP_032756177 HMG box transcription factor BBX protein-coding 626043396 Slc49a4 solute carrier family 49 member 4 INVOLVED IN pyridoxine transport (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); renal cell carcinoma (ortholog); FOUND IN lysosomal membrane (ortholog) 4 20473590 20546586 - 22301074;30032202 116898811 MODEL JAAIVD010000003;XM_032900162 XP_032756053 protein-coding 626043409 Cimip2b ciliary microtubule inner protein 2B INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Meckel syndrome (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 1 3069839 3073048 + 116891117 MODEL JAAIVD010000025;XM_032891836 XP_032747727 Fam166b family with sequence similarity 166 member B;protein FAM166B protein-coding 626043418 Thoc1 THO complex 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 86 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 15 34138244 34177988 - 22301074;30032202 116884826 MODEL JAAIVD010000010;XM_032886062 XP_032741953 THO complex subunit 1 protein-coding 626043443 Cars2 cysteinyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits cysteine-tRNA ligase activity (ortholog); INVOLVED IN cysteinyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 27 (ortholog); genetic disease (ortholog); maturity-onset diabetes of the young type 2 (ortholog); FOUND IN mitochondrion (ortholog) 13 72310823 72347366 + 22301074;30032202 116914282 MODEL JAAIVD010000008;XM_032918504;XM_032918505 XP_032774395;XP_032774396 probable cysteine--tRNA ligase, mitochondrial protein-coding 626043464 LOC116898074 splicing factor U2AF 35 kDa subunit-like 4 89295783 89296364 + 116898074 MODEL JAAIVD010000003 pseudo 626043465 LOC116906851 heat shock protein HSP 90-beta-like 8 31610713 31612885 - 116906851 MODEL JAAIVD010000027 pseudo 626043466 Mctp1 multiple C2 and transmembrane domain containing 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN negative regulation of cell migration (ortholog); negative regulation of endocytosis (ortholog); negative regulation of response to oxidative stress (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); neuromuscular disease (ortholog); FOUND IN membrane (ortholog); recycling endosome (ortholog); synaptic vesicle membrane (ortholog) 3 219843772 220709456 - 30032202 116896094 MODEL JAAIVD010000012;XM_032897068 XP_032752959 multiple C2 and transmembrane domain-containing protein 1 protein-coding 626043491 Ifitm10 interferon induced transmembrane protein 10 2 7105762 7123027 + 30032202 116890988 MODEL JAAIVD010000001;XM_032891662 XP_032747553 interferon-induced transmembrane protein 10 protein-coding 626043498 LOC116893855 olfactory receptor 13G1-like 2 61427936 61428859 + 22301074 116893855 MODEL JAAIVD010000001;XM_032895574 XP_032751465 protein-coding 626043501 LOC116910347 developmental pluripotency-associated protein 2-like 9 68289982 68296354 - 30032202 116910347 MODEL JAAIVD010000002;XM_032914203 XP_032770094 protein-coding 626043505 LOC116899597 40S ribosomal protein S15-like 4 159032092 159032585 - 22301074;30032202 116899597 MODEL JAAIVD010000003;XM_032901542 XP_032757433 protein-coding 626043510 LOC116904502 putative vomeronasal receptor-like protein 4 6 159383189 159387223 - 116904502 MODEL JAAIVD010000024 pseudo 626043511 LOC116899818 small nucleolar RNA SNORA36 family 4 84609562 84609692 + 116899818 MODEL JAAIVD010000003;XR_004387818 snorna 626043514 LOC116902612 small nucleolar RNA SNORA17 5 24252064 24252185 + 116902612 MODEL JAAIVD010000023 pseudo 626043515 Syce2 synaptonemal complex central element protein 2 FOUND IN central element (ortholog); chromosome (ortholog); nucleoplasm (ortholog) 17 15403035 15421267 - 30032202 116886243 MODEL JAAIVD010000011;XM_032887654 XP_032743545 protein-coding 626043523 LOC116899136 Friend virus susceptibility protein 1-like 4 84446135 84454204 - 116899136 MODEL JAAIVD010000003;XM_032900670;XM_032900671 XP_032756561;XP_032756562 protein-coding 626043531 Snn stannin ENCODES a protein that exhibits metal ion binding (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 9 11251215 11259897 - 22301074 116910397 MODEL JAAIVD010000002;XM_032914238 XP_032770129 protein-coding 626043537 LOC116909774 COMM domain-containing protein 4 9 62152505 62153361 + 116909774 MODEL JAAIVD010000002;XM_032913465 XP_032769356 protein-coding 626043542 Ap2a2 adaptor related protein complex 2 subunit alpha 2 ENCODES a protein that exhibits disordered domain specific binding (ortholog); kinase binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FOUND IN AP-2 adaptor complex (ortholog); cytoplasmic vesicle (ortholog); membrane coat (ortholog) 2 7860612 7933551 - 22301074;30032202 116890858 MODEL JAAIVD010000001;XM_032891423;XM_032891424 XP_032747314;XP_032747315 AP-2 complex subunit alpha-2 protein-coding 626043570 LOC116899829 small nucleolar RNA SNORA51 4 110764822 110764954 - 116899829 MODEL JAAIVD010000003;XR_004387829 snorna 626043573 LOC116883543 uncharacterized LOC116883543 14 12278381 12279149 - 116883543 MODEL JAAIVD010000009;XR_004385770 ncrna 626043577 Frmpd3 FERM and PDZ domain containing 3 X 92772816 92850925 + 22301074 116888084 MODEL JAAIVD010000014;XM_032889455 XP_032745346 FERM and PDZ domain-containing protein 3 protein-coding 626043597 LOC116912779 40S ribosomal protein S24-like 11 74613170 74613615 - 116912779 MODEL JAAIVD010000006 pseudo 626043598 Lamb1 laminin subunit beta 1 ENCODES a protein that exhibits enzyme binding (ortholog); extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN cell migration (ortholog); embryo implantation (ortholog); endodermal cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Classical Lissencephalies and Subcortical Band Heterotopias (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 7 44634561 44699227 + 30032202 116904946 MODEL JAAIVD010000026;XM_032907592 XP_032763483 laminin subunit beta-1 protein-coding 626043635 LOC116900709 60S ribosomal protein L27a-like 5 132596618 132597064 + 116900709 MODEL JAAIVD010000023 pseudo 626043636 LOC116902957 vomeronasal type-1 receptor 105 6 124285222 124286232 + 22301074;30032202 116902957 MODEL JAAIVD010000024;XM_032905283 XP_032761174 protein-coding 626043639 LOC116899754 U6 spliceosomal RNA 4 32557770 32557876 + 116899754 MODEL JAAIVD010000003;XR_004387769 snrna 626043642 Reck reversion inducing cysteine rich protein with kazal motifs ENCODES a protein that exhibits coreceptor activity (ortholog); endopeptidase inhibitor activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); canonical Wnt signaling pathway (ortholog); embryo implantation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); glioblastoma (ortholog); FOUND IN plasma membrane (ortholog); Wnt signalosome (ortholog) 1 2578732 2644247 - 22301074;30032202 116890934 MODEL JAAIVD010000025;XM_032891579 XP_032747470 reversion-inducing cysteine-rich protein with Kazal motifs protein-coding 626043667 Bcas1 brain enriched myelin associated protein 1 INVOLVED IN myelination (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); synapse (ortholog) 5 147473470 147557770 + 30032202 116902292 MODEL JAAIVD010000023;XM_032904727 XP_032760618 breast carcinoma-amplified sequence 1 protein-coding 626043684 Cog7 component of oligomeric golgi complex 7 INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIe (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi transport complex (ortholog); nucleolus (ortholog) 2 79836910 79891139 + 22301074;30032202 116891565 MODEL JAAIVD010000001;XM_032892743;XM_032892744 XP_032748634;XP_032748635 conserved oligomeric Golgi complex subunit 7 protein-coding 626043708 Mab21l2 mab-21 like 2 INVOLVED IN camera-type eye development (ortholog); embryonic body morphogenesis (ortholog); eye development (ortholog); ASSOCIATED WITH coloboma (ortholog); rheumatoid arthritis (ortholog); syndromic microphthalmia 14 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 67023270 67025859 + 116896724 MODEL JAAIVD010000012;XM_032898146 XP_032754037 protein mab-21-like 2 protein-coding 626043713 LOC116885774 40S ribosomal protein S15a-like 16 17132625 17133097 + 22301074;30032202 116885774 MODEL JAAIVD010000004;XM_032887095 XP_032742986 protein-coding 626043718 LOC116894613 vomeronasal type-2 receptor 116-like 2 185117324 185130866 - 22301074;30032202 116894613 MODEL JAAIVD010000001;XM_032896327 XP_032752218 protein-coding 626043727 LOC116884552 uncharacterized LOC116884552 15 75700133 75703880 - 116884552 MODEL JAAIVD010000010;XR_004385878 ncrna 626043731 Dhx38 DEAH-box helicase 38 INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 84 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) 17 29268200 29285157 - 22301074;30032202 116886694 MODEL JAAIVD010000011;XM_032888191 XP_032744082 pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 protein-coding 626043762 LOC116895800 40S ribosomal protein S17-like 3 64412714 64413612 - 116895800 MODEL JAAIVD010000012 pseudo 626043763 LOC116884433 uncharacterized LOC116884433 15 44608268 44611236 + 116884433 MODEL JAAIVD010000010;XR_004385870 ncrna 626043767 LOC116889549 U2 spliceosomal RNA X 3229720 3229898 + 116889549 MODEL JAAIVD010000014 pseudo 626043768 Il6st interleukin 6 cytokine family signal transducer ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); coreceptor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cell body (ortholog); ciliary neurotrophic factor receptor complex (ortholog); dendrite (ortholog) 3 184551564 184592603 - 22301074;30032202 116897193 MODEL JAAIVD010000012;XM_032898892 XP_032754783 interleukin 6 signal transducer;interleukin-6 receptor subunit beta protein-coding 626043789 Map1lc3b microtubule associated protein 1 light chain 3 beta ENCODES a protein that exhibits ceramide binding (ortholog); microtubule binding (ortholog); phosphatidylethanolamine binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Liver Reperfusion Injury (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 17 41253179 41260892 + 30032202 116886566 MODEL JAAIVD010000011;XM_032888085;XM_032888086 XP_032743976;XP_032743977 microtubule-associated proteins 1A/1B light chain 3B protein-coding 626043803 Pxmp4 peroxisomal membrane protein 4 INVOLVED IN ether lipid metabolic process (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 5 133956611 133973883 - 30032202 116902163 MODEL JAAIVD010000023;XM_032904504 XP_032760395 protein-coding 626043811 Smarcc2 SWI/SNF related BAF chromatin remodeling complex subunit C2 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); forebrain neuron fate commitment (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Coffin-Siris syndrome 1 (ortholog); Coffin-Siris syndrome 8 (ortholog); genetic disease (ortholog); FOUND IN nBAF complex (ortholog); npBAF complex (ortholog); nucleoplasm (ortholog) 1 155925165 155952744 + 30032202 116906078 MODEL JAAIVD010000025;XM_032909105;XM_032909106;XM_032909109;XM_032909111;XM_032909113;XM_032909116;XM_032909120;XM_032909123 XP_032764996;XP_032764997;XP_032765000;XP_032765002;XP_032765004;XP_032765007;XP_032765011;XP_032765014 SWI/SNF complex subunit SMARCC2;SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2 protein-coding 626043856 Ttc36 tetratricopeptide repeat domain 36 INVOLVED IN central nervous system neuron development (ortholog); memory (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog) 8 39332311 39336178 - 22301074;30032202 116907350 MODEL JAAIVD010000027;XM_032910282 XP_032766173 tetratricopeptide repeat protein 36 protein-coding 626043863 Tcf21 transcription factor 21 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); branchiomeric skeletal muscle development (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Paroxysmal Atrial Fibrillation (ortholog); ventricular septal defect (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 2 208879927 208882805 - 22301074;30032202 116894657 MODEL JAAIVD010000001;XM_032896362 XP_032752253 protein-coding 626043869 LOC116905842 ubiquitin-conjugating enzyme E2 variant 1-like 7 109656377 109657323 + 116905842 MODEL JAAIVD010000026 pseudo 626043870 LOC116883548 serpin B6-like 14 52336941 52346557 - 30032202 116883548 MODEL JAAIVD010000009;XM_032884719 XP_032740610 protein-coding 626043880 LOC116906192 60S acidic ribosomal protein P2-like 7 118278852 118280095 + 116906192 MODEL JAAIVD010000026 pseudo 626043881 LOC116906667 ATPase MORC2B 1 157704622 157708704 - 22301074;30032202 116906667 MODEL JAAIVD010000025;XM_032909455 XP_032765346 protein-coding 626043887 Slc10a5 solute carrier family 10 member 5 3 144382650 144387794 - 22301074;30032202 116897034 MODEL JAAIVD010000012;XM_032898655 XP_032754546 sodium/bile acid cotransporter 5 protein-coding 626043893 Traf3 TNF receptor associated factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); mRNA transcription (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Ependymomas (ortholog); Herpes Simplex Encephalitis (ortholog); immunodeficiency 132A (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasmic side of plasma membrane (ortholog); endosome (ortholog) 7 128815397 128840328 + 22301074;30032202 116905486 MODEL JAAIVD010000026;XM_032908483;XM_032908485 XP_032764374;XP_032764376 TNF receptor-associated factor 3 protein-coding 626043907 Syt11 synaptotagmin 11 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); SNARE binding (ortholog); INVOLVED IN autophagy (ortholog); calcium ion regulated lysosome exocytosis (ortholog); establishment of vesicle localization (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytoplasm (ortholog) 3 64799843 64816882 + 22301074;30032202 116896674 MODEL JAAIVD010000012;XM_032898045 XP_032753936 synaptotagmin-11 protein-coding 626043914 Samhd1 SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1 ENCODES a protein that exhibits deoxynucleoside triphosphate hydrolase activity (ortholog); dGTP binding (ortholog); dGTPase activity (ortholog); INVOLVED IN dATP catabolic process (ortholog); defense response to virus (ortholog); deoxyribonucleotide catabolic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 5 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 5 136440504 136475943 - 22301074;30032202 116902218 MODEL JAAIVD010000023;XM_032904623 XP_032760514 deoxynucleoside triphosphate triphosphohydrolase SAMHD1 protein-coding 626043934 LOC116889511 small nucleolar RNA SNORA17 X 41701665 41701796 - 116889511 MODEL JAAIVD010000014;XR_004386456 snorna 626043937 LOC116904722 small nucleolar RNA SNORA17 6 87212560 87212689 + 116904722 MODEL JAAIVD010000024;XR_004388415 snorna 626043940 Scara3 scavenger receptor class A member 3 FOUND IN endoplasmic reticulum (ortholog) 12 58489533 58524295 + 116913064 MODEL JAAIVD010000007;XM_032917192 XP_032773083 protein-coding 626043950 LOC116890179 E3 ubiquitin-protein ligase CHFR-like 1 259418679 259420406 - 116890179 MODEL JAAIVD010000025 pseudo 626043951 LOC116893887 peptidyl-prolyl cis-trans isomerase A-like 1 68754943 68755461 - 116893887 MODEL JAAIVD010000025 pseudo 626043952 Ovol2 ovo like zinc finger 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); dorsal/ventral pattern formation (ortholog); embryonic digestive tract morphogenesis (ortholog); ASSOCIATED WITH pilomatrixoma (ortholog); posterior polymorphous corneal dystrophy 1 (ortholog); FOUND IN nucleus (ortholog) 5 123950491 123980523 - 30032202 116902042 MODEL JAAIVD010000023;XM_032904327 XP_032760218 transcription factor Ovo-like 2 protein-coding 626043960 Nmur1 neuromedin U receptor 1 ENCODES a protein that exhibits neuromedin U binding (ortholog); neuromedin U receptor activity (ortholog); neuropeptide receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); chloride transport (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN cilium (ortholog); membrane (ortholog) 4 158519970 158523816 - 22301074;30032202 116898567 MODEL JAAIVD010000003;XM_032899773 XP_032755664 neuromedin-U receptor 1 protein-coding 626043966 Fam118a family with sequence similarity 118 member A ENCODES a protein that exhibits identical protein binding (ortholog) 1 254404181 254437981 + 116914609 MODEL JAAIVD010000025;XM_032918975;XM_032918982;XM_032918988 XP_032774866;XP_032774873;XP_032774879 protein FAM118A protein-coding 626043985 LOC116888288 uncharacterized protein C9orf85 homolog X 99308264 99308635 + 116888288 MODEL JAAIVD010000014;XM_032889564 XP_032745455 protein-coding 626043988 Nobox NOBOX oogenesis homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN ovarian follicle development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) 6 97335469 97341045 + 30032202 116902848 MODEL JAAIVD010000024;XM_032905176 XP_032761067 homeobox protein NOBOX protein-coding 626043999 LOC116891362 uncharacterized LOC116891362 2 62276798 62278400 + 116891362 MODEL JAAIVD010000001;XR_004386831 ncrna 626044003 Unc5c unc-5 netrin receptor C ENCODES a protein that exhibits netrin receptor activity (ortholog); netrin receptor activity involved in chemorepulsion (ortholog); protein kinase binding (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); brain development (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); filopodium (ortholog) 3 18968702 19320865 + 22301074;30032202 116896200 MODEL JAAIVD010000012;XM_032897248;XM_032897249 XP_032753139;XP_032753140 netrin receptor UNC5C protein-coding 626044029 Trim36 tripartite motif containing 36 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN acrosome reaction (ortholog); mitotic cytokinesis (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH anencephaly (ortholog); Anencephaly 1 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 40870552 40912615 + 22301074 116884297 MODEL JAAIVD010000010;XM_032885395 XP_032741286 E3 ubiquitin-protein ligase TRIM36 protein-coding 626044043 LOC116886251 pyrethroid hydrolase Ces2e-like 17 12974877 12983788 + 30032202 116886251 MODEL JAAIVD010000011;XM_032887669;XM_032887670;XM_032887671;XM_032887672 XP_032743560;XP_032743561;XP_032743562;XP_032743563 acylcarnitine hydrolase-like protein-coding 626044067 LOC116895400 rRNA-processing protein FCF1 homolog 3 60298552 60299140 + 116895400 MODEL JAAIVD010000012 pseudo 626044068 Gng3 G protein subunit gamma 3 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galpha12/Galpha13 family; FOUND IN cell body (ortholog); dendrite (ortholog); postsynaptic density (ortholog) 2 9107798 9109405 + 22301074;30032202 116890922 MODEL JAAIVD010000001;XM_032891557 XP_032747448 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-3 protein-coding 626044075 C2H10orf90 chromosome 2 C10orf90 homolog ENCODES a protein that exhibits histone deacetylase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of cell growth (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 67406094 67634867 + 30032202 116891384 MODEL JAAIVD010000001;XM_032892398 XP_032748289 (E2-independent) E3 ubiquitin-conjugating enzyme FATS protein-coding 626044089 LOC116903151 26S proteasome non-ATPase regulatory subunit 1-like 1 134572866 134574848 - 116903151 MODEL JAAIVD010000025 pseudo 626044090 Hpdl 4-hydroxyphenylpyruvate dioxygenase like ENCODES a protein that exhibits 4-hydroxymandelate synthase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 83 (ortholog); neurodegenerative disease (ortholog); FOUND IN mitochondrion (ortholog) 1 40456306 40458032 - 22301074;30032202 116898521 MODEL JAAIVD010000025;XM_032899748 XP_032755639 4-hydroxyphenylpyruvate dioxygenase-like protein protein-coding 626044095 Rnf208 ring finger protein 208 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 11937905 11939930 - 30032202 116901316 MODEL JAAIVD010000023;XM_032903128 XP_032759019 protein-coding 626044101 LOC116911683 olfactory receptor 10J5 10 52033103 52034032 + 22301074 116911683 MODEL JAAIVD010000005;XM_032915636 XP_032771527 protein-coding 626044104 LOC116903333 60S ribosomal protein L4-like 6 26575991 26577147 - 116903333 MODEL JAAIVD010000024 pseudo 626044105 LOC116887937 kinesin-like protein KIF18B X 61576317 61578745 + 116887937 MODEL JAAIVD010000014 pseudo 626044106 Matk megakaryocyte-associated tyrosine kinase ASSOCIATED WITH COVID-19 (ortholog) 1 153629435 153638243 - 22301074;30032202 116904468 MODEL JAAIVD010000025;XM_032907280;XM_032907282;XM_032907286;XM_032907288;XM_032907292;XM_032907293 XP_032763171;XP_032763173;XP_032763177;XP_032763179;XP_032763183;XP_032763184 megakaryocyte-associated tyrosine-protein kinase protein-coding 626044135 Lrrtm1 leucine rich repeat transmembrane neuronal 1 INVOLVED IN establishment of localization in cell (ortholog); exploration behavior (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 6 69060391 69076147 - 22301074 116903667 MODEL JAAIVD010000024;XM_032906325;XM_032906326;XR_004388290 XP_032762216;XP_032762217 leucine-rich repeat transmembrane neuronal protein 1 protein-coding 626044146 LOC116894001 olfactory receptor 51I2-like 2 101618255 101619205 + 22301074 116894001 MODEL JAAIVD010000001;XM_032895717 XP_032751608 protein-coding 626044149 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42321607 42321680 - 116884173 MODEL JAAIVD010000009 trna 626044150 Ntng1 netrin G1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); regulation of neuron migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Colorectal Neoplasms (ortholog); schizophrenia (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); presynaptic active zone membrane (ortholog) 3 48548056 48607457 + 30032202 116896346 MODEL JAAIVD010000012;XM_032897449 XP_032753340 netrin-G1 protein-coding 626044156 LOC116909265 uncharacterized LOC116909265 9 64073663 64074523 + 116909265 MODEL JAAIVD010000002;XR_004389063 ncrna 626044160 Otos otospiralin INVOLVED IN sensory perception of sound (ortholog) 4 164611626 164615091 - 22301074;30032202 116898281 MODEL JAAIVD010000003;XM_032899632 XP_032755523 protein-coding 626044168 LOC116910745 U2 spliceosomal RNA 9 60889455 60889645 + 116910745 MODEL JAAIVD010000002;XR_004389258 snrna 626044171 LOC116914072 uncharacterized LOC116914072 12 90616696 90617356 + 116914072 MODEL JAAIVD010000007;XR_004389664 ncrna 626044175 LOC116915122 small nucleolar RNA SNORA17 13 42290635 42290766 + 116915122 MODEL JAAIVD010000008;XR_004389803 snorna 626044178 Slitrk5 SLIT and NTRK like family member 5 INVOLVED IN adult behavior (ortholog); axonogenesis (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); obsessive-compulsive disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); receptor complex (ortholog) 12 13346229 13354881 - 22301074;30032202 116913505 MODEL JAAIVD010000007;XM_032917707;XM_032917708;XM_032917709;XM_032917710 XP_032773598;XP_032773599;XP_032773600;XP_032773601 SLIT and NTRK-like protein 5 protein-coding 626044193 LOC116889938 olfactory receptor 6C76 1 161147157 161148131 - 22301074;30032202 116889938 MODEL JAAIVD010000025;XM_032890747 XP_032746638 protein-coding 626044197 Ttll7 tubulin tyrosine ligase like 7 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN protein polyglutamylation (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); ciliary basal body (ortholog) 3 13908983 14033198 - 30032202 116896165 MODEL JAAIVD010000012;XM_032897194;XM_032897195;XM_032897197 XP_032753085;XP_032753086;XP_032753088 tubulin polyglutamylase TTLL7 protein-coding 626044227 Tmem231 transmembrane protein 231 INVOLVED IN camera-type eye development (ortholog); cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH CAKUT (ortholog); ciliopathy (ortholog); gastrointestinal stromal tumor (ortholog); FOUND IN ciliary membrane (ortholog); ciliary transition zone (ortholog); membrane (ortholog) 17 31607214 31626128 - 30032202 116886483 MODEL JAAIVD010000011;XM_032887986 XP_032743877 protein-coding 626044238 LOC116904268 uncharacterized LOC116904268 6 39801184 39817580 - 30032202 116904268 MODEL JAAIVD010000024;XM_032907214 XP_032763105 uncharacterized protein LOC116904268 protein-coding 626044247 Myocd myocardin ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle cell differentiation (ortholog); cardiac muscle cell myoblast differentiation (ortholog); cardiac vascular smooth muscle cell differentiation (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH aortic atherosclerosis (ortholog); atrial fibrillation (ortholog); Cardio-Renal Syndrome (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 44811741 44864968 - 30032202 116909897 MODEL JAAIVD010000002;XM_032913648 XP_032769539 protein-coding 626044263 LOC116914032 uncharacterized LOC116914032 12 3018511 3021717 + 116914032 MODEL JAAIVD010000007;XR_004389659 ncrna 626044267 Foxl1 forkhead box L1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN heart development (ortholog); Peyer's patch morphogenesis (ortholog); proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH otosclerosis 11 (ortholog); FOUND IN nucleus (ortholog) 17 40779056 40780081 + 30032202 116886563 MODEL JAAIVD010000011;XM_032888080 XP_032743971 forkhead box protein L1 protein-coding 626044270 Slc15a4 solute carrier family 15 member 4 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); L-histidine transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN dipeptide import across plasma membrane (ortholog); histidine transport (ortholog); L-histidine transmembrane export from vacuole (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome membrane (ortholog); endosome membrane (ortholog) 16 26319879 26339660 + 22301074;30032202 116885152 MODEL JAAIVD010000004;XM_032886358 XP_032742249 protein-coding 626044282 Slc9d1 solute carrier family 9 member D1 ASSOCIATED WITH basal cell carcinoma (ortholog) 13 70382240 70419380 - 22301074;30032202 116914243 MODEL JAAIVD010000008;XM_032918451;XM_032918452;XM_032918453;XM_032918454;XM_032918455 XP_032774342;XP_032774343;XP_032774344;XP_032774345;XP_032774346 Tmco3 transmembrane and coiled-coil domain-containing protein 3;transmembrane and coiled-coil domains 3 protein-coding 626044311 Ciroz ciliated left-right organizer protein containing ZP-N domains INVOLVED IN determination of left/right symmetry (ortholog); establishment of left/right asymmetry (ortholog); heart development (ortholog); ASSOCIATED WITH dextrocardia (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN extracellular region (ortholog) 1 12106116 12135074 - 30032202 116892716 MODEL JAAIVD010000025;XM_032894585 XP_032750476 C1H1orf127 chromosome 1 C1orf127 homolog;uncharacterized protein C1orf127 homolog protein-coding 626044324 LOC116894499 ferritin light chain 1-like 2 172672989 172673527 - 116894499 MODEL JAAIVD010000001 pseudo 626044325 LOC116909074 interferon-induced transmembrane protein 1-like 9 83752243 83753911 - 116909074 MODEL JAAIVD010000002 pseudo 626044326 Prpf19 pre-mRNA processing factor 19 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); double-strand break repair via nonhomologous end joining (ortholog); inner cell mass cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); Hydrops Fetalis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); DNA replication factor A complex (ortholog) 2 10372115 10382886 + 22301074;30032202 116890974 MODEL JAAIVD010000001;XM_032891639;XM_032891641 XP_032747530;XP_032747532 pre-mRNA-processing factor 19 protein-coding 626044350 LOC116899052 roundabout homolog 1-like 4 69219879 69793597 - 30032202 116899052 MODEL JAAIVD010000003;XM_032900524 XP_032756415 protein-coding 626044357 LOC116911506 olfactory receptor 10J1-like 10 52193433 52194365 - 22301074 116911506 MODEL JAAIVD010000005;XM_032915493 XP_032771384 protein-coding 626044360 Adnp activity dependent neuroprotector homeobox ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); cGMP-mediated signaling (ortholog); estrous cycle (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); extracellular space (ortholog) 5 149797437 149827216 + 22301074;30032202 116902300 MODEL JAAIVD010000023;XM_032904740;XM_032904741;XM_032904742;XM_032904744 XP_032760631;XP_032760632;XP_032760633;XP_032760635 activity-dependent neuroprotector homeobox protein protein-coding 626044378 Gckr glucokinase regulator ENCODES a protein that exhibits carbohydrate binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN intracellular glucose homeostasis (ortholog); negative regulation of glucokinase activity (ortholog); negative regulation of hexokinase activity (ortholog); PARTICIPATES IN glycogen metabolic pathway; ASSOCIATED WITH end stage renal disease (ortholog); Hypertriglyceridemia (ortholog); Metabolic Syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 22752939 22782559 - 22301074;30032202 116905634 MODEL JAAIVD010000026;XM_032908614 XP_032764505 glucokinase regulatory protein protein-coding 626044400 LOC116895376 ribosomal biogenesis factor-like 3 54587082 54587348 - 22301074;30032202 116895376 MODEL JAAIVD010000012;XM_032896670 XP_032752561 protein-coding 626044403 Klk11 kallikrein related peptidase 11 ASSOCIATED WITH genetic disease (ortholog); Ichthyosis with Erythrokeratoderma (ortholog); FOUND IN extracellular region (ortholog) 2 155613565 155618077 - 22301074 116894357 MODEL JAAIVD010000001;XM_032896059 XP_032751950 kallikrein-11 protein-coding 626044413 LOC116886961 prohibitin-like 18 33589895 33615131 + 116886961 MODEL JAAIVD010000013 pseudo 626044414 LOC116912820 zinc finger CCCH domain-containing protein 3-like 1 248075547 248114355 - 22301074;30032202 116912820 MODEL JAAIVD010000025;XM_032916998 XP_032772889 protein-coding 626044425 Ap5s1 adaptor related protein complex 5 subunit sigma 1 INVOLVED IN double-strand break repair via homologous recombination (ortholog); endosomal transport (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) 5 110937109 110940081 + 22301074;30032202 116901988 MODEL JAAIVD010000023;XM_032904238;XM_032904239 XP_032760129;XP_032760130 AP-5 complex subunit sigma-1 protein-coding 626044435 LOC116902238 uncharacterized LOC116902238 5 137826026 137828089 + 116902238 MODEL JAAIVD010000023;XR_004388055 ncrna 626044440 Zcchc2 zinc finger CCHC-type containing 2 ASSOCIATED WITH bipolar disorder (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog) 10 89708303 89753002 + 22301074 116911792 MODEL JAAIVD010000005;XM_032915793 XP_032771684 zinc finger CCHC domain-containing protein 2 protein-coding 626044458 Chrna9 cholinergic receptor nicotinic alpha 9 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH lung small cell carcinoma (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 11 23070374 23076959 + 22301074;30032202 116912785 MODEL JAAIVD010000006;XM_032916948 XP_032772839 neuronal acetylcholine receptor subunit alpha-9 protein-coding 626044467 Ascc1 activating signal cointegrator 1 complex subunit 1 INVOLVED IN regulation of DNA-templated transcription (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); centronuclear myopathy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN DNA repair complex (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 18 25830285 25913322 + 22301074;30032202 116886921 MODEL JAAIVD010000013;XM_032888401 XP_032744292 protein-coding 626044481 KEG97_t04 tRNA-Ile MT 3693 3761 + 64988249 trna 626044482 Adig adipogenin INVOLVED IN brown fat cell differentiation (ortholog); positive regulation of fat cell differentiation (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); nucleus (ortholog) 5 137847106 137852576 + 30032202 116900734 MODEL JAAIVD010000023;XM_032902439 XP_032758330 protein-coding 626044489 LOC116892756 vomeronasal type-2 receptor 116-like 2 181920114 181938609 + 22301074;30032202 116892756 MODEL JAAIVD010000001;XM_032894634 XP_032750525 protein-coding 626044497 LOC116899827 small nucleolar RNA SNORA29 4 40123578 40123711 + 116899827 MODEL JAAIVD010000003;XR_004387827 snorna 626044500 Mospd1 motile sperm domain containing 1 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) X 115879492 115907236 + 30032202 116888651 MODEL JAAIVD010000014;XM_032889941;XM_032889942;XM_032889943;XM_032889944;XM_032889945 XP_032745832;XP_032745833;XP_032745834;XP_032745835;XP_032745836 motile sperm domain-containing protein 1 protein-coding 626044520 LOC116911988 microfibrillar-associated protein 1-like 11 47502688 47504726 + 116911988 MODEL JAAIVD010000006 pseudo 626044521 Gpr82 G protein-coupled receptor 82 INVOLVED IN adipose tissue development (ortholog); energy homeostasis (ortholog); response to food (ortholog); ASSOCIATED WITH prostate cancer (ortholog) X 20657536 20658764 + 22301074 116889407 MODEL JAAIVD010000014;XM_032890510 XP_032746401 probable G-protein coupled receptor 82 protein-coding 626044525 Exosc8 exosome component 8 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH pontocerebellar hypoplasia type 1C (ortholog); spastic ataxia (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 99669705 99676272 + 30032202 116896871 MODEL JAAIVD010000012;XM_032898414 XP_032754305 exosome complex component RRP43 protein-coding 626044540 LOC116896992 U1 small nuclear ribonucleoprotein C-like 3 127350522 127350949 + 116896992 MODEL JAAIVD010000012 pseudo 626044541 Pla2g1b phospholipase A2 group IB ENCODES a protein that exhibits bile acid binding (ortholog); calcium ion binding (ortholog); calcium-dependent phospholipase A2 activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); arachidonate secretion (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); FOUND IN cell surface (ortholog); extracellular region (ortholog); extracellular space (ortholog) 16 38352016 38358445 - 22301074;30032202 116885598 MODEL JAAIVD010000004;XM_032886902 XP_032742793 phospholipase A2 protein-coding 626044548 LOC116906929 uncharacterized LOC116906929 8 55353402 55365014 + 116906929 MODEL JAAIVD010000027;XR_004388782 ncrna 626044554 LOC116888914 fructose-bisphosphate aldolase A-like X 35078900 35088051 - 116888914 MODEL JAAIVD010000014 pseudo 626044555 LOC116887439 antigen peptide transporter 2 18 8068742 8083090 - 22301074;30032202 116887439 MODEL JAAIVD010000013;XM_032889052 XP_032744943 protein-coding 626044571 Fam217a family with sequence similarity 217 member A 14 53425185 53432182 - 116883623 MODEL JAAIVD010000009;XM_032884813 XP_032740704 protein FAM217A protein-coding 626044582 LOC116895636 mediator of RNA polymerase II transcription subunit 27-like 3 176390968 176391657 - 116895636 MODEL JAAIVD010000012 pseudo 626044583 Nudcd2 NudC domain containing 2 FOUND IN cytosol (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 9 23668559 23673935 + 30032202 116909341 MODEL JAAIVD010000002;XM_032912890 XP_032768781 nudC domain-containing protein 2 protein-coding 626044591 Nek7 NIMA related kinase 7 ENCODES a protein that exhibits molecular function activator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to potassium ion (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-18-mediated signaling pathway (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); microtubule organizing center (ortholog); nucleoplasm (ortholog) 10 18834599 18967590 - 22301074 116911060 MODEL JAAIVD010000005;XM_032914817;XM_032914818;XM_032914820 XP_032770708;XP_032770709;XP_032770711 serine/threonine-protein kinase Nek7 protein-coding 626044610 Scml1 Scm polycomb group protein like 1 FOUND IN female germ cell nucleus (ortholog); male germ cell nucleus (ortholog) X 22886135 22905169 + 22301074 116889056 MODEL JAAIVD010000014;XM_032890244 XP_032746135 sex comb on midleg-like protein 1 protein-coding 626044620 LOC116903742 proteasome maturation protein-like 6 14492713 14514580 - 116903742 MODEL JAAIVD010000024 pseudo 626044621 LOC116912236 high mobility group protein B3-like 11 44359033 44359935 + 22301074;30032202 116912236 MODEL JAAIVD010000006;XM_032916212 XP_032772103 protein-coding 626044626 Tmem43 transmembrane protein 43 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN memory (ortholog); nuclear membrane organization (ortholog); positive regulation of cell communication by electrical coupling (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 5 (ortholog); autosomal dominant auditory neuropathy 3 (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); Golgi apparatus (ortholog); nuclear inner membrane (ortholog) 6 55453069 55468121 - 30032202 116903499 MODEL JAAIVD010000024;XM_032906095 XP_032761986 protein-coding 626044642 Tgfbrap1 transforming growth factor beta receptor associated protein 1 ENCODES a protein that exhibits SMAD binding (ortholog); transforming growth factor beta receptor binding (ortholog); INVOLVED IN endosomal vesicle fusion (ortholog); endosome to lysosome transport (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN CORVET complex (ortholog); early endosome (ortholog); membrane (ortholog) 4 119202010 119249766 - 22301074;30032202 116899340 MODEL JAAIVD010000003;XM_032901027 XP_032756918 transforming growth factor-beta receptor-associated protein 1 protein-coding 626044659 C13H8orf48 chromosome 13 C8orf48 homolog 13 50098366 50100266 - 116914877 MODEL JAAIVD010000008;XM_032919320 XP_032775211 uncharacterized protein C8orf48 homolog protein-coding 626044664 LOC116902550 small nucleolar RNA SNORA48 5 2081390 2081535 + 116902550 MODEL JAAIVD010000023;XR_004388151 snorna 626044667 LOC116902658 U6 spliceosomal RNA 5 41858149 41858255 + 116902658 MODEL JAAIVD010000023;XR_004388221 snrna 626044670 Ctrc chymotrypsin C ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); proteolysis (ortholog); ASSOCIATED WITH Chronic Pancreatitis (ortholog); Hereditary Pancreatitis (ortholog) 1 16309313 16316950 + 22301074;30032202 116890273 MODEL JAAIVD010000025;XM_032890990 XP_032746881 chymotrypsin-C protein-coding 626044679 Grik4 glutamate ionotropic receptor kainate type subunit 4 ENCODES a protein that exhibits glutamate-gated receptor activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 8 37106140 37537212 - 1648176;22301074;30032202 116908310 MODEL JAAIVD010000027;X59996;XM_032911594 CAA42615;XP_032767485 glutamate receptor ionotropic, kainate 4;kainate receceptor protein-coding 626044704 LOC116889151 prostaglandin E synthase 3-like X 38657648 38658887 - 116889151 MODEL JAAIVD010000014 pseudo 626044705 Pkp3 plakophilin 3 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cell adhesion molecule binding (ortholog); enzyme binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); desmosome assembly (ortholog); desmosome organization (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); Prostatic Neoplasms (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 2 8383777 8393339 - 30032202 116890888 MODEL JAAIVD010000001;XM_032891501 XP_032747392 plakophilin-3 protein-coding 626044722 LOC116911896 U7 small nuclear RNA 10 15204860 15204923 - 116911896 MODEL JAAIVD010000005;XR_004389404 snrna 626044725 LOC116900034 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 1 5 269469 285137 + 22301074;30032202 116900034 MODEL JAAIVD010000023;XM_032901830 XP_032757721 protein-coding 626044732 Nlrc3 NLR family CARD domain containing 3 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 17882620 17902303 + 22301074;30032202 116910074 MODEL JAAIVD010000002;XM_032913889 XP_032769780 NLR family CARD domain-containing protein 3 protein-coding 626044753 Dpy30 dpy-30 histone methyltransferase complex regulatory subunit ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN endosomal transport (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Golgi apparatus (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) 7 18930702 18946188 + 30032202 116905937 MODEL JAAIVD010000026;XM_032908930 XP_032764821 protein dpy-30 homolog protein-coding 626044762 LOC116904789 small nucleolar RNA U13 6 85925295 85925393 + 116904789 MODEL JAAIVD010000024 pseudo 626044763 Znf865 zinc finger protein 865 2 177595714 177608927 + 30032202 116892682 MODEL JAAIVD010000001;XM_032894523 XP_032750414 protein-coding 626044769 LOC116903587 phosphoglycerate kinase 1-like 6 40348942 40349871 + 116903587 MODEL JAAIVD010000024 pseudo 626044770 Eml6 EMAP like 6 ASSOCIATED WITH High Myopia (ortholog); keratoconus (ortholog) 11 97358438 97647052 - 30032202 116912061 MODEL JAAIVD010000006;XM_032915924 XP_032771815 echinoderm microtubule-associated protein-like 6 protein-coding 626044816 LOC116898575 pyruvate kinase PKM-like 4 163237142 163238917 + 116898575 MODEL JAAIVD010000003 pseudo 626044817 LOC116914932 GDP-mannose 4,6 dehydratase-like 13 7032558 7033741 - 116914932 MODEL JAAIVD010000008 pseudo 626044818 LOC116901979 glutathione S-transferase alpha-4-like 5 110576661 110588297 + 22301074;30032202 116901979 MODEL JAAIVD010000023;XM_032904224 XP_032760115 protein-coding 626044824 St3gal4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4 ENCODES a protein that exhibits beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase (ortholog); beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); N-acetyllactosaminide alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); glycolipid biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Enterovirus Infections (ortholog); Salivary Gland Neoplasms (ortholog) 8 30612338 30661069 - 22301074;30032202 116906722 MODEL JAAIVD010000027;XM_032909531;XM_032909532;XM_032909533 XP_032765422;XP_032765423;XP_032765424 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 4 protein-coding 626044847 C15H18orf63 chromosome 15 C18orf63 homolog INVOLVED IN male gonad development (ortholog) 15 47537352 47574758 + 116884375 MODEL JAAIVD010000010;XM_032885492 XP_032741383 uncharacterized protein C18orf63 homolog protein-coding 626044861 LOC116913965 uncharacterized LOC116913965 12 51350925 51382908 + 116913965 MODEL JAAIVD010000007;XR_004389648 ncrna 626044868 LOC116884422 cofilin-1-like 15 75680399 75681097 + 116884422 MODEL JAAIVD010000010 pseudo 626044869 LOC116898190 sperm head and tail associated protein-like 1 39731289 39734027 - 116898190 MODEL JAAIVD010000025;XM_032899557 XP_032755448 protein-coding 626044874 LOC116909738 60S ribosomal protein L35a-like 9 55698647 55699032 + 22301074;30032202 116909738 MODEL JAAIVD010000002;XM_032913416 XP_032769307 protein-coding 626044878 LOC116884507 protocadherin alpha-11-like 15 7364469 7367856 - 22301074 116884507 MODEL JAAIVD010000010;XM_032885635 XP_032741526 protein-coding 626044883 LOC116890614 U6atac minor spliceosomal RNA 1 205577571 205577708 - 116890614 MODEL JAAIVD010000025 pseudo 626044884 LOC116887364 transmembrane protein 217-like 18 4336053 4336792 + 116887364 MODEL JAAIVD010000013;XM_032888960 XP_032744851 protein-coding 626044889 LOC116884902 ubiquitin-40S ribosomal protein S27a-like 15 3759365 3760333 + 116884902 MODEL JAAIVD010000010 pseudo 626044890 LOC116909031 olfactory receptor 1468-like 9 44503119 44504057 - 22301074;30032202 116909031 MODEL JAAIVD010000002;XM_032912510 XP_032768401 protein-coding 626044893 LOC116889521 small nucleolar RNA SNORA17 X 80052213 80052343 + 116889521 MODEL JAAIVD010000014;XR_004386463 snorna 626044896 Igfbp1 insulin like growth factor binding protein 1 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); insulin-like growth factor I binding (ortholog); insulin-like growth factor II binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); positive regulation of cell growth (ortholog); response to insulin (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Burns (ortholog); Colonic Neoplasms (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog) 11 76105516 76110190 + 22301074;30032202 116912341 MODEL JAAIVD010000006;XM_032916389 XP_032772280 insulin-like growth factor-binding protein 1 protein-coding 626044904 LOC116890395 U6 spliceosomal RNA 1 189271737 189271836 - 116890395 MODEL JAAIVD010000025 pseudo 626044905 Crtc3 CREB regulated transcription coactivator 3 INVOLVED IN energy homeostasis (ortholog); macrophage activation (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 119606764 119648301 + 30032202 116891913 MODEL JAAIVD010000001;XM_032893335;XM_032893336;XM_032893337 XP_032749226;XP_032749227;XP_032749228 CREB-regulated transcription coactivator 3 protein-coding 626044930 Rbm44 RNA binding motif protein 44 ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog) 4 163143622 163165175 + 22301074 116898264 MODEL JAAIVD010000003;XM_032899618 XP_032755509 RNA-binding protein 44 protein-coding 626044948 Ccdc38 coiled-coil domain containing 38 ENCODES a protein that exhibits ubiquitin-modified histone reader activity (ortholog); INVOLVED IN acrosome assembly (ortholog); intraciliary anterograde transport (ortholog); sperm flagellum assembly (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); perinuclear region of cytoplasm (ortholog) 1 172622481 172659808 + 30032202 116912622 MODEL JAAIVD010000025;XM_032916774 XP_032772665 coiled-coil domain-containing protein 38 protein-coding 626044968 Gal3st2 galactose-3-O-sulfotransferase 2 ENCODES a protein that exhibits galactose 3-O-sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN glycoprotein biosynthetic process (ortholog); sulfation (ortholog); FOUND IN membrane (ortholog) 4 165765108 165776189 + 22301074;30032202 116899677 MODEL JAAIVD010000003;XM_032901695 XP_032757586 protein-coding 626044976 Aasdh aminoadipate-semialdehyde dehydrogenase INVOLVED IN amino acid activation for nonribosomal peptide biosynthetic process (ortholog); beta-alanine metabolic process (ortholog) 11 33626433 33659003 - 22301074;30032202 116912285 MODEL JAAIVD010000006;XM_032916280 XP_032772171 beta-alanine-activating enzyme protein-coding 626044996 Vsig8 V-set and immunoglobulin domain containing 8 10 51674105 51682518 + 30032202 116911512 MODEL JAAIVD010000005;XM_032915501 XP_032771392 V-set and immunoglobulin domain-containing protein 8 protein-coding 626045007 LOC116910309 developmental pluripotency-associated protein 3-like 9 50372952 50373515 - 30032202 116910309 MODEL JAAIVD010000002;XM_032914175 XP_032770066 protein-coding 626045011 Fam181b family with sequence similarity 181 member B 2 108048685 108050635 - 116891839 MODEL JAAIVD010000001;XM_032893206 XP_032749097 protein FAM181B protein-coding 626045016 Cd93 CD93 molecule ENCODES a protein that exhibits complement component C1q complex binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell adhesion (ortholog); ASSOCIATED WITH thyroid gland carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 5 127999733 128005038 - 22301074 116902074 MODEL JAAIVD010000023;XM_032904364 XP_032760255 complement component C1q receptor protein-coding 626045022 LOC116889063 proteasome subunit beta type-6-like X 23623928 23632749 - 116889063 MODEL JAAIVD010000014 pseudo 626045023 LOC116884139 small nucleolar RNA SNORD113/SNORD114 family 14 79899414 79899496 + 116884139 MODEL JAAIVD010000009 pseudo 626045024 Tmem185a transmembrane protein 185A FOUND IN dendrite (ortholog) 8 34580368 34605769 - 30032202 116907046 MODEL JAAIVD010000027;XM_032909999;XM_032910000;XM_032910001 XP_032765890;XP_032765891;XP_032765892 protein-coding 626045042 Lypd8 LY6/PLAUR domain containing 8 INVOLVED IN defense response to Gram-negative bacterium (ortholog); FOUND IN extracellular space (ortholog) 9 39843425 39854329 - 30032202 116909207 MODEL JAAIVD010000002;XM_032912706 XP_032768597 ly6/PLAUR domain-containing protein 8 protein-coding 626045052 LOC116899766 U6 spliceosomal RNA 4 79320520 79320624 - 116899766 MODEL JAAIVD010000003;XR_004387780 snrna 626045055 Suclg1 succinate-CoA ligase GDP/ADP-forming subunit alpha ENCODES a protein that exhibits GDP binding (ortholog); protein-containing complex binding (ortholog); succinate-CoA ligase (ADP-forming) activity (ortholog); INVOLVED IN succinate metabolic process (ortholog); succinyl-CoA metabolic process (ortholog); tricarboxylic acid cycle (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); mitochondrial DNA depletion syndrome (ortholog); FOUND IN mitochondrion (ortholog); protein-containing complex (ortholog); succinate-CoA ligase complex (GDP-forming) (ortholog) 6 73271289 73301385 - 30032202 116903670 MODEL JAAIVD010000024;XM_032906330 XP_032762221 succinate--CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial protein-coding 626045068 LOC116894531 vomeronasal type-1 receptor 4-like 2 175886649 175887632 + 22301074;30032202 116894531 MODEL JAAIVD010000001;XM_032896234 XP_032752125 protein-coding 626045071 LOC116895513 60S ribosomal protein L23a-like 3 115551166 115551749 - 116895513 MODEL JAAIVD010000012 pseudo 626045072 Top1 DNA topoisomerase I ENCODES a protein that exhibits ATP binding (ortholog); chromatin binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to luteinizing hormone stimulus (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN irinotecan pharmacodynamics pathway; irinotecan pharmacokinetics pathway; ASSOCIATED WITH disease of cellular proliferation (ortholog); Disease Progression (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN cytoplasm (ortholog); dense fibrillar component (ortholog); fibrillar center (ortholog) 5 139937462 140018874 + 22301074;30032202 116902246 MODEL JAAIVD010000023;XM_032904664 XP_032760555 DNA topoisomerase 1 protein-coding 626045097 Ajuba ajuba LIM protein ENCODES a protein that exhibits actin filament binding (ortholog); alpha-catenin binding (ortholog); chromatin binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); focal adhesion assembly (ortholog); glycerophospholipid biosynthetic process (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); focal adhesion (ortholog) 12 70430108 70439916 + 30032202 116913832 MODEL JAAIVD010000007;XM_032918144 XP_032774035 LIM domain-containing protein ajuba protein-coding 626045109 Smug1 single-strand-selective monofunctional uracil-DNA glycosylase 1 ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); identical protein binding (ortholog); oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 1 259921607 259931003 + 22301074;30032202 116883293 MODEL JAAIVD010000025;XM_032884297 XP_032740188 single-strand selective monofunctional uracil DNA glycosylase protein-coding 626045116 Dok5 docking protein 5 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); neuron differentiation (ortholog); positive regulation of MAPK cascade (ortholog) 5 147147280 147289509 - 30032202 116902290 MODEL JAAIVD010000023;XM_032904725 XP_032760616 protein-coding 626045128 Lcn2 lipocalin 2 ENCODES a protein that exhibits enterobactin binding (ortholog); identical protein binding (ortholog); iron ion binding (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to hydrogen peroxide (ortholog); ASSOCIATED WITH Abscess (ortholog); acute cystitis (ortholog); acute kidney failure (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 5 3243253 3249506 + 30032202 116899994 MODEL JAAIVD010000023;XM_032901803 XP_032757694 neutrophil gelatinase-associated lipocalin protein-coding 626045137 Msmo1 methylsterol monooxygenase 1 ENCODES a protein that exhibits C-4 methylsterol oxidase activity (ortholog); INVOLVED IN cholesterol biosynthetic process via desmosterol (ortholog); zymosterol biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH genetic disease (ortholog); Microcephaly, Congenital Cataract, and Psoriasiform Dermatitis (ortholog) 13 24392064 24401655 + 22301074;30032202 116914454 MODEL JAAIVD010000008;XM_032918756 XP_032774647 protein-coding 626045146 LOC116889857 uncharacterized LOC116889857 1 153499208 153501402 - 116889857 MODEL JAAIVD010000025;XM_032890684 XP_032746575 uncharacterized protein LOC116889857 protein-coding 626045152 Mapre1 microtubule associated protein RP/EB family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule plus-end binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); cell migration (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN N-cadherin signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); Weight Gain (ortholog); FOUND IN cell projection (ortholog); cell projection membrane (ortholog); centrosome (ortholog) 5 133062147 133090603 + 30032202 116902150 MODEL JAAIVD010000023;XM_032904483;XM_032904484 XP_032760374;XP_032760375 microtubule-associated protein RP/EB family member 1 protein-coding 626045166 LOC116892210 60S ribosomal protein L7a-like 1 60866518 60867731 - 116892210 MODEL JAAIVD010000025 pseudo 626045167 Septin1 septin 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN meiotic metaphase chromosome alignment (ortholog); spindle assembly involved in female meiosis (ortholog); FOUND IN meiotic spindle (ortholog); midbody (ortholog) 2 74671432 74676280 + 22301074;30032202 116891483 MODEL JAAIVD010000001;XM_032892586;XM_032892587;XR_004386840 XP_032748477;XP_032748478 septin-1 protein-coding 626045188 LOC116899580 sp110 nuclear body protein-like 4 157697490 157720086 - 22301074;30032202 116899580 MODEL JAAIVD010000003;XM_032901520 XP_032757411 protein-coding 626045205 LOC116898999 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 1 102197747 102202047 - 30032202 116898999 MODEL JAAIVD010000025;XM_032900480 XP_032756371 protein-coding 626045211 Arhgap26 Rho GTPase activating protein 26 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitophagy (ortholog); ASSOCIATED WITH acute myelomonocytic leukemia (ortholog); juvenile myelomonocytic leukemia (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); mitochondrion (ortholog) 15 5561615 5948168 - 22301074;30032202 116884329 MODEL JAAIVD010000010;XM_032885464;XM_032885465 XP_032741355;XP_032741356 rho GTPase-activating protein 26 protein-coding 626045239 LOC116889335 growth hormone-inducible transmembrane protein-like 1 237646607 237647669 - 116889335 MODEL JAAIVD010000025 pseudo 626045240 Kmt5c lysine methyltransferase 5C ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H4K20 methyltransferase activity (ortholog); INVOLVED IN DNA repair (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); liver benign neoplasm (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) 2 177315616 177323379 + 22301074;30032202 116892666 MODEL JAAIVD010000001;XM_032894489;XM_032894490;XM_032894491;XM_032894492;XM_032894493;XM_032894494 XP_032750380;XP_032750381;XP_032750382;XP_032750383;XP_032750384;XP_032750385 histone-lysine N-methyltransferase KMT5C protein-coding 626045266 Sertad1 SERTA domain containing 1 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sarcoplasm (ortholog) 2 168455654 168459066 - 30032202 116892427 MODEL JAAIVD010000001;XM_032894113 XP_032750004 SERTA domain-containing protein 1 protein-coding 626045272 LOC116910780 U6 spliceosomal RNA 9 55971488 55971591 + 116910780 MODEL JAAIVD010000002;XR_004389286 snrna 626045275 LOC116906454 small nucleolar RNA SNORA17 7 72845956 72846081 - 116906454 MODEL JAAIVD010000026;XR_004388710 snorna 626045278 LOC116900678 cystatin-related protein 1-like 5 128487664 128493802 - 30032202 116900678 MODEL JAAIVD010000023;XM_032902382 XP_032758273 protein-coding 626045284 LOC116903537 uncharacterized protein FLJ43738-like 6 58612150 58648476 + 116903537 MODEL JAAIVD010000024;XM_032906151 XP_032762042 protein-coding 626045299 LOC116911595 uncharacterized LOC116911595 10 20816032 20845457 - 116911595 MODEL JAAIVD010000005 pseudo 626045300 Atp2a2 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel regulator activity (ortholog); calcium ion binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome membrane docking (ortholog); calcium ion import into sarcoplasmic reticulum (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acrokeratosis verruciformis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN apical ectoplasmic specialization (ortholog); calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum (ortholog) 16 31351559 31399321 + 22301074;30032202 116885711 MODEL JAAIVD010000004;XM_032887019 XP_032742910 sarcoplasmic/endoplasmic reticulum calcium ATPase 2 protein-coding 626045325 Slco4c1 solute carrier organic anion transporter family member 4C1 ENCODES a protein that exhibits organic anion transmembrane transporter activity (ortholog); INVOLVED IN organic anion transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH kidney failure (ortholog); FOUND IN basolateral plasma membrane (ortholog) 5 104673634 104722809 - 22301074;30032202 116901915 MODEL JAAIVD010000023;XM_032904132 XP_032760023 protein-coding 626045342 Susd1 sushi domain containing 1 1 92006670 92121017 + 22301074 116901537 MODEL JAAIVD010000025;XM_032903523 XP_032759414 sushi domain-containing protein 1 protein-coding 626045361 S100a10 S100 calcium binding protein A10 ENCODES a protein that exhibits lipid binding (ortholog); protein homodimerization activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN membrane raft assembly (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Disease Models (ortholog); depressive disorder (ortholog); FOUND IN AnxA2-p11 complex (ortholog); cell surface (ortholog); membrane raft (ortholog) 3 121109154 121118143 - 22301074;30032202 116896955 MODEL JAAIVD010000012;XM_032898523;XM_032898524 XP_032754414;XP_032754415 protein S100-A10 protein-coding 626045371 LOC116909999 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like 9 81918768 81919226 + 116909999 MODEL JAAIVD010000002 pseudo 626045372 Mafa MAF bZIP transcription factor A ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN insulin secretion (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Combined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN nucleus (ortholog) 1 248064543 248066943 - 30032202 116912776 MODEL JAAIVD010000025;XM_032916939 XP_032772830 transcription factor MafA protein-coding 626045376 LOC116894550 vomeronasal type-2 receptor 116-like 2 177710431 177741886 + 22301074;30032202 116894550 MODEL JAAIVD010000001;XM_032896259;XM_032896260 XP_032752150;XP_032752151 protein-coding 626045391 LOC116893762 prorelaxin 1 2 29410424 29413370 - 22301074 116893762 MODEL JAAIVD010000001;XM_032895464;XM_032895465 XP_032751355;XP_032751356 protein-coding 626045401 Xkr5 XK related 5 FOUND IN plasma membrane (ortholog) 13 65235928 65253753 + 30032202 116914898 MODEL JAAIVD010000008;XM_032919341 XP_032775232 XK-related protein 5 protein-coding 626045412 LOC116887163 olfactory receptor 2A12-like 1 38040407 38041345 + 22301074 116887163 MODEL JAAIVD010000025;XM_032888714 XP_032744605 protein-coding 626045415 Gabrg3 gamma-aminobutyric acid type A receptor subunit gamma3 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Brain Injuries (ortholog); FOUND IN GABA-ergic synapse (ortholog); microtubule cytoskeleton (ortholog); nucleolus (ortholog) 2 141912705 142512196 + 22301074;30032202 116892040 MODEL JAAIVD010000001;XM_032893505 XP_032749396 gamma-aminobutyric acid receptor subunit gamma-3 protein-coding 626045429 LOC116905476 uncharacterized LOC116905476 7 128231475 128247079 - 116905476 MODEL JAAIVD010000026;XM_032908446 XP_032764337 uncharacterized protein LOC116905476 protein-coding 626045439 Hnrnph1 heterogeneous nuclear ribonucleoprotein H1 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); cellular response to peptide (ortholog); regulation of RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Experimental Autoimmune Orchitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 33035385 33044599 + 22301074;30032202 116908673 MODEL JAAIVD010000002;XM_032911964;XM_032911965;XM_032911966;XM_032911967;XM_032911968;XM_032911969;XM_032911970;XM_032911971;XM_032911972 XP_032767855;XP_032767856;XP_032767857;XP_032767858;XP_032767859;XP_032767860;XP_032767861;XP_032767862;XP_032767863 heterogeneous nuclear ribonucleoprotein H protein-coding 626045474 Wwc2 WW and C2 domain containing 2 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 13 40044361 40204959 + 30032202 116914396 MODEL JAAIVD010000008;XM_032918623 XP_032774514 protein WWC2 protein-coding 626045501 Sdhb succinate dehydrogenase complex iron sulfur subunit B ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); INVOLVED IN respiratory electron transport chain (ortholog); succinate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; electron transport chain pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); Bannayan-Riley-Ruvalcaba syndrome (ortholog); bilateral breast cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 17166088 17185705 - 22301074;30032202 116893523 MODEL JAAIVD010000025;XM_032895252 XP_032751143 succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial protein-coding 626045513 C12H14orf119 chromosome 12 C14orf119 homolog ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 12 70309197 70313606 - 116913937 MODEL JAAIVD010000007;XM_032918199;XM_032918200 XP_032774090;XP_032774091 uncharacterized protein C14orf119 homolog protein-coding 626045522 LOC116911118 protein CEBPZOS-like 10 41778023 41778262 - 116911118 MODEL JAAIVD010000005 pseudo 626045523 Foxn4 forkhead box N4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); neuron fate commitment (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 16 39689191 39707076 + 22301074;30032202 116885929 MODEL JAAIVD010000004;XM_032887239;XM_032887240 XP_032743130;XP_032743131 forkhead box protein N4 protein-coding 626045536 Prokr2 prokineticin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN circadian rhythm (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); epilepsy (ortholog); FOUND IN plasma membrane (ortholog) 5 112079232 112091208 - 22301074;30032202 116900647 MODEL JAAIVD010000023;XM_032902357;XM_032902358 XP_032758248;XP_032758249 protein-coding 626045545 Slc22a6 solute carrier family 22 member 6 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); antiporter activity (ortholog); chloride ion binding (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); metanephric proximal tubule development (ortholog); monoatomic anion transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH calcinosis (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 2 9305144 9313284 - 22301074;30032202 116893632 MODEL JAAIVD010000001;XM_032895345 XP_032751236 protein-coding 626045557 Synpo2 synaptopodin 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); alpha-actinin binding (ortholog); filamin binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); chaperone-mediated autophagy (ortholog); positive regulation of actin filament bundle assembly (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); focal adhesion (ortholog) 3 36591864 36738338 + 30032202 116896292 MODEL JAAIVD010000012;XM_032897374 XP_032753265 synaptopodin-2 protein-coding 626045566 LOC116911161 eukaryotic translation initiation factor 3 subunit E-like 1 218551111 218552334 - 116911161 MODEL JAAIVD010000025 pseudo 626045567 LOC116895696 spindlin-1-like 3 208064854 208065595 - 116895696 MODEL JAAIVD010000012 pseudo 626045568 Asb5 ankyrin repeat and SOCS box containing 5 13 33759817 33806822 + 22301074;30032202 116914728 MODEL JAAIVD010000008;XM_032919156;XM_032919157;XM_032919158;XM_032919159;XM_032919160 XP_032775047;XP_032775048;XP_032775049;XP_032775050;XP_032775051 ankyrin repeat and SOCS box protein 5 protein-coding 626045591 LOC116896056 peptidyl-prolyl cis-trans isomerase A-like 3 203566518 203576533 - 116896056 MODEL JAAIVD010000012 pseudo 626045592 LOC116887611 class I histocompatibility antigen, Gogo-A*0101 alpha chain-like 18 9623584 9625158 + 116887611 MODEL JAAIVD010000013 pseudo 626045593 LOC116910175 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 161503520 161506980 - 116910175 MODEL JAAIVD010000025 pseudo 626045594 E2f7 E2F transcription factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity (ortholog); INVOLVED IN chorionic trophoblast cell differentiation (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); hepatocyte differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 1 188884201 188926337 + 30032202 116908845 MODEL JAAIVD010000025;XM_032912272 XP_032768163 transcription factor E2F7 protein-coding 626045611 Lrit3 leucine rich repeat, Ig-like and transmembrane domains 3 INVOLVED IN gene expression (ortholog); intracellular protein localization (ortholog); regulation of fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1F (ortholog); fundus dystrophy (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog) 3 29500204 29517712 + 22301074 116895319 MODEL JAAIVD010000012;XM_032896628 XP_032752519 leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3 protein-coding 626045617 LOC116895983 ubiquitin-conjugating enzyme E2 R2-like 3 162014312 162034005 - 116895983 MODEL JAAIVD010000012 pseudo 626045618 LOC116890332 U6 spliceosomal RNA 1 155723077 155723183 + 116890332 MODEL JAAIVD010000025;XR_004386555 snrna 626045621 Sytl3 synaptotagmin like 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); neurexin family protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN exocytosis (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 2 192422536 192491682 - 22301074;30032202 116892848 MODEL JAAIVD010000001;XM_032894738 XP_032750629 synaptotagmin-like protein 3 protein-coding 626045640 LOC116902697 trypsin V-A 6 41777619 41783781 - 1537555;22301074;30032202 116902697 MODEL JAAIVD010000024;X59012;X59013;XM_032905053 CAA41751;CAA41752;XP_032760944 trypsin V a-form;trypsin V b-form protein-coding 626045649 Ugcg UDP-glucose ceramide glucosyltransferase ENCODES a protein that exhibits ceramide glucosyltransferase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cornified envelope assembly (ortholog); establishment of skin barrier (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN Golgi membrane (ortholog); membrane (ortholog) 1 92212392 92244522 - 30032202 116901546 MODEL JAAIVD010000025;XM_032903535 XP_032759426 ceramide glucosyltransferase protein-coding 626045662 LOC116890088 60S ribosomal protein L36-like 1 252673392 252673700 - 116890088 MODEL JAAIVD010000025 pseudo 626045663 Hmgb2 high mobility group box 2 ENCODES a protein that exhibits chemoattractant activity (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); damaged DNA binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell chemotaxis (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); hepatocellular carcinoma (ortholog); Knee Osteoarthritis (ortholog); FOUND IN chromatin (ortholog); condensed chromosome (ortholog); cytoplasm (ortholog) 13 31370465 31373070 - 22301074;30032202 116914856 MODEL JAAIVD010000008;XM_032919308 XP_032775199 high mobility group protein B2 protein-coding 626045672 Mroh9 maestro heat like repeat family member 9 10 42278900 42352199 - 22301074;30032202 116910895 MODEL JAAIVD010000005;XM_032914663 XP_032770554 maestro heat-like repeat-containing protein family member 9 protein-coding 626045696 LOC116889079 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like X 25858954 25859486 + 22301074;30032202 116889079 MODEL JAAIVD010000014;XM_032890257 XP_032746148 protein-coding 626045700 Ppp4c protein phosphatase 4 catalytic subunit ENCODES a protein that exhibits lamin binding (ortholog); phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); dephosphorylation (ortholog); negative regulation of protein phosphorylation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH coronary artery disease (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 75104816 75111565 + 30032202 116891507 MODEL JAAIVD010000001;XM_032892640;XM_032892641 XP_032748531;XP_032748532 serine/threonine-protein phosphatase 4 catalytic subunit protein-coding 626045717 Shisa9 shisa family member 9 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN regulation of short-term neuronal synaptic plasticity (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendritic spine membrane (ortholog); glutamatergic synapse (ortholog) 9 10025185 10319012 - 30032202 116908572 MODEL JAAIVD010000002;XM_032911779;XM_032911780;XM_032911781 XP_032767670;XP_032767671;XP_032767672 protein shisa-9 protein-coding 626045731 Npsr1 neuropeptide S receptor 1 ENCODES a protein that exhibits neuropeptide receptor activity (ortholog); INVOLVED IN eating behavior (ortholog); negative regulation of defecation (ortholog); negative regulation of eating behavior (ortholog); ASSOCIATED WITH Alcoholic Intoxication (ortholog); Anorexia (ortholog); asthma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 8 19927840 20334446 + 22301074;30032202 116908024 MODEL JAAIVD010000027;XM_032911286;XM_032911287 XP_032767177;XP_032767178 neuropeptide S receptor protein-coding 626045744 LOC116906538 uncharacterized LOC116906538 8 90295829 90297481 - 116906538 MODEL JAAIVD010000027;XR_004388746 ncrna 626045749 LOC116911825 small nucleolar RNA SNORA17 10 85841663 85841794 - 116911825 MODEL JAAIVD010000005;XR_004389361 snorna 626045752 LOC116890617 small nucleolar RNA SNORD121A 1 4360524 4360600 + 116890617 MODEL JAAIVD010000025;XR_004386767 snorna 626045755 LOC116896099 uncharacterized LOC116896099 3 223092762 223097947 - 116896099 MODEL JAAIVD010000012 pseudo 626045756 LOC116894007 olfactory receptor 51I1-like 2 101673524 101674461 - 22301074 116894007 MODEL JAAIVD010000001;XM_032895723 XP_032751614 protein-coding 626045759 Kdm4b lysine demethylase 4B ENCODES a protein that exhibits histone demethylase activity (ortholog); histone H3K36 demethylase activity (ortholog); histone H3K9 demethylase activity (ortholog); INVOLVED IN brain development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autosomal dominant intellectual developmental disorder 65 (ortholog); breast cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); pericentric heterochromatin (ortholog) 4 87716424 87794767 + 30032202 116899181 MODEL JAAIVD010000003;XM_032900754;XM_032900755 XP_032756645;XP_032756646 lysine-specific demethylase 4B protein-coding 626045789 Vamp1 vesicle associated membrane protein 1 INVOLVED IN regulation of synaptic vesicle fusion to presynaptic active zone membrane (ortholog); SNARE complex assembly (ortholog); synaptic vesicle priming (ortholog); ASSOCIATED WITH Congenital Myasthenic Syndrome 25 (ortholog); paraplegia (ortholog); spastic ataxia 1 (ortholog); FOUND IN azurophil granule membrane (ortholog); cell surface (ortholog); cytosol (ortholog) 6 22682886 22689680 - 22301074;30032202 116903254 MODEL JAAIVD010000024;XM_032905636 XP_032761527 vesicle-associated membrane protein 1 protein-coding 626045798 Akt1s1 AKT1 substrate 1 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); cytoplasmic translation (ortholog); negative regulation of cell size (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Reperfusion Injury (ortholog); Spinal Cord Injuries (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog); TORC1 complex (ortholog) 2 154687102 154693345 - 22301074;30032202 116892191 MODEL JAAIVD010000001;XM_032893717;XM_032893718;XM_032893719;XM_032893720;XM_032893721 XP_032749608;XP_032749609;XP_032749610;XP_032749611;XP_032749612 proline-rich AKT1 substrate 1 protein-coding 626045820 LOC116895035 small nucleolar RNA SNORA17 2 66782118 66782246 + 116895035 MODEL JAAIVD010000001;XR_004387221 snorna 626045823 Uncx UNC homeobox ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cartilage condensation (ortholog); common myeloid progenitor cell proliferation (ortholog); dorsal spinal cord development (ortholog) 16 13646011 13650600 - 22301074;30032202 116885421 MODEL JAAIVD010000004;XM_032886708 XP_032742599 homeobox protein unc-4 homolog protein-coding 626045830 LOC116888384 claudin-34-like X 126449950 126450588 - 116888384 MODEL JAAIVD010000014 pseudo 626045831 LOC116889360 melanoma-associated antigen B4-like X 49950874 49954449 + 30032202 116889360 MODEL JAAIVD010000014;XM_032890468 XP_032746359 protein-coding 626045838 Nphs1 NPHS1 adhesion molecule, nephrin ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN glomerular basement membrane development (ortholog); podocyte development (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH Albuminuria (ortholog); atypical hemolytic-uremic syndrome (ortholog); benign familial hematuria (ortholog); FOUND IN plasma membrane (ortholog) 2 165515481 165542327 - 30032202 116894459 MODEL JAAIVD010000001;XM_032896169;XM_032896170 XP_032752060;XP_032752061 nephrin protein-coding 626045876 LOC116907397 olfactory receptor 143-like 8 31995572 31996507 + 22301074;30032202 116907397 MODEL JAAIVD010000027;XM_032910350 XP_032766241 protein-coding 626045880 Atox1 antioxidant 1 copper chaperone ENCODES a protein that exhibits ATPase binding (ortholog); copper chaperone activity (ortholog); copper ion binding (ortholog); INVOLVED IN copper ion export (ortholog); copper ion transport (ortholog); intracellular copper ion homeostasis (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Chronic Hepatitis (ortholog); Colorectal Neoplasms (ortholog) 9 37863247 37878382 - 22301074;30032202 116910083 MODEL JAAIVD010000002;XM_032913900 XP_032769791 copper transport protein ATOX1 protein-coding 626045888 Ikzf3 IKAROS family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN B cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN interleukin-2 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); asthma (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 55842275 55927770 + 30032202 116910129 MODEL JAAIVD010000002;XM_032913963;XM_032913964 XP_032769854;XP_032769855 zinc finger protein Aiolos protein-coding 626045903 Papolg poly(A) polymerase gamma ENCODES a protein that exhibits metal ion binding (ortholog); poly(A) RNA polymerase activity (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 11 93069328 93101119 + 22301074;30032202 116912272 MODEL JAAIVD010000006;XM_032916261 XP_032772152 protein-coding 626045929 C9H17orf100 chromosome 9 C17orf100 homolog 9 43291231 43294531 - 116910230 MODEL JAAIVD010000002;XM_032914120 XP_032770011 uncharacterized protein C17orf100 homolog protein-coding 626045935 Ogfod3 2-oxoglutarate and iron dependent oxygenase domain containing 3 9 62820228 62849279 + 22301074;30032202 116909842 MODEL JAAIVD010000002;XM_032913568 XP_032769459 2-oxoglutarate and iron-dependent oxygenase domain-containing protein 3 protein-coding 626045948 Fezf1 FEZ family zinc finger 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell dedifferentiation (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); genetic disease (ortholog); hypogonadotropic hypogonadism 22 with or without anosmia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 115991547 115994854 + 30032202 116902931 MODEL JAAIVD010000024;XM_032905256;XM_032905257 XP_032761147;XP_032761148 fez family zinc finger protein 1 protein-coding 626045961 Mindy3 MINDY lysine 48 deubiquitinase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) 3 21148414 21173409 - 30032202 116895234 MODEL JAAIVD010000012;XM_032896557 XP_032752448 ubiquitin carboxyl-terminal hydrolase MINDY-3 protein-coding 626045969 Enkur enkurin, TRPC channel interacting protein ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN establishment of left/right asymmetry (ortholog); flagellated sperm motility (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); acrosomal vesicle (ortholog) 14 2906861 2930906 + 30032202 116883685 MODEL JAAIVD010000009;XM_032884897 XP_032740788 enkurin protein-coding 626045977 Heatr6 HEAT repeat containing 6 ASSOCIATED WITH Joubert syndrome (ortholog); Joubert syndrome 1 (ortholog) 9 86898696 86927476 - 116909361 MODEL JAAIVD010000002;XM_032912909 XP_032768800 HEAT repeat-containing protein 6 protein-coding 626046001 Ncbp1 nuclear cap binding protein subunit 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); RNA 7-methylguanosine cap binding (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); defense response to virus (ortholog); histone mRNA metabolic process (ortholog); PARTICIPATES IN 5'-end pre-mRNA capping pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH intracranial aneurysm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 1 344368 377262 - 22301074;30032202 116890665 MODEL JAAIVD010000025;XM_032891072;XM_032891080 XP_032746963;XP_032746971 nuclear cap-binding protein subunit 1 protein-coding 626046033 LOC116883318 tubulin alpha-4A chain-like 14 74558396 74559709 - 116883318 MODEL JAAIVD010000009 pseudo 626046034 LOC116901461 sodium channel protein type 2 subunit alpha-like 5 43156438 43241124 + 22301074;30032202 116901461 MODEL JAAIVD010000023;XM_032903409 XP_032759300 protein-coding 626046065 LOC116910017 adenosine kinase-like 9 54383986 54385020 - 116910017 MODEL JAAIVD010000002 pseudo 626046066 Msh3 mutS homolog 3 ENCODES a protein that exhibits centromeric DNA binding (ortholog); damaged DNA binding (ortholog); dinucleotide insertion or deletion binding (ortholog); INVOLVED IN DNA repair (ortholog); maintenance of DNA repeat elements (ortholog); mismatch repair (ortholog); PARTICIPATES IN mismatch repair pathway; ASSOCIATED WITH colorectal carcinoma (ortholog); Digestive System Neoplasms (ortholog); endometrial cancer (ortholog); FOUND IN MutSbeta complex (ortholog); nucleus (ortholog) 3 203936440 204076381 + 22301074;30032202 116897302 MODEL JAAIVD010000012;XM_032899044;XM_032899046 XP_032754935;XP_032754937 DNA mismatch repair protein Msh3 protein-coding 626046096 LOC116903097 partner of Y14 and mago-like 1 124063961 124064665 - 116903097 MODEL JAAIVD010000025 pseudo 626046097 Pax6 paired box 6 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); co-SMAD binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); astrocyte differentiation (ortholog); axon guidance (ortholog); ASSOCIATED WITH aniridia (ortholog); aniridia 1 (ortholog); Anophthalmia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 83584609 83605766 + 22301074;30032202 116900936 MODEL JAAIVD010000023;XM_032902581 XP_032758472 paired box protein Pax-6 protein-coding 626046114 Cldn2 claudin 2 ENCODES a protein that exhibits identical protein binding (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules (ortholog); cell-cell adhesion (ortholog); innate immune response in mucosa (ortholog); ASSOCIATED WITH AZOOSPERMIA, OBSTRUCTIVE, WITH NEPHROLITHIASIS (ortholog); male infertility (ortholog); pancreatitis (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) X 92263710 92274304 - 22301074;30032202 116888642 MODEL JAAIVD010000014;XM_032889933 XP_032745824 claudin-2 protein-coding 626046120 LOC116911414 COP9 signalosome complex subunit 8-like 10 43289465 43290127 - 116911414 MODEL JAAIVD010000005 pseudo 626046121 Orm1 orosomucoid 1 ENCODES a protein that exhibits amine binding (ortholog); small molecule binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); animal organ regeneration (ortholog); cellular response to glucocorticoid stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Drug Hypersensitivity Syndrome (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN extracellular space (ortholog) 1 90224498 90227643 - 22301074;30032202 116888392 MODEL JAAIVD010000025;XM_032889668 XP_032745559 alpha-1-acid glycoprotein 1 protein-coding 626046131 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 4095329 4095401 - 116895135 MODEL JAAIVD010000001 trna 626046132 LOC116893393 CD177 antigen-like 2 169992564 169999244 - 30032202 116893393 MODEL JAAIVD010000001;XM_032895184 XP_032751075 protein-coding 626046140 Gimap4 GTPase, IMAP family member 4 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog) 6 92279808 92286829 - 22301074 116904384 MODEL JAAIVD010000024;XM_032907252 XP_032763143 GTPase IMAP family member 4 protein-coding 626046146 Amer1 APC membrane recruitment protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); beta-catenin destruction complex binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN adipose tissue development (ortholog); bone development (ortholog); kidney development (ortholog); ASSOCIATED WITH cleft palate (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN nuclear body (ortholog); plasma membrane (ortholog) X 53194829 53215421 + 30032202 116888616 MODEL JAAIVD010000014;XM_032889914 XP_032745805 protein-coding 626046152 LOC116883694 3-alpha-hydroxysteroid dehydrogenase 14 18370212 18384474 + 30032202 116883694 MODEL JAAIVD010000009;XM_032884907 XP_032740798 protein-coding 626046164 LOC116894649 peptidyl-prolyl cis-trans isomerase D-like 2 200661298 200662562 - 116894649 MODEL JAAIVD010000001 pseudo 626046165 Rtel1 regulator of telomere elongation helicase 1 ENCODES a protein that exhibits ATP binding (ortholog); DNA helicase activity (ortholog); DNA polymerase binding (ortholog); INVOLVED IN DNA strand displacement (ortholog); mitotic telomere maintenance via semi-conservative replication (ortholog); negative regulation of DNA recombination (ortholog); ASSOCIATED WITH autosomal recessive dyskeratosis congenita 5 (ortholog); childhood astrocytic tumor (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) 5 158416839 158450652 + 22301074;30032202 116902441 MODEL JAAIVD010000023;XM_032904982 XP_032760873 protein-coding 626046205 LOC116915070 uncharacterized LOC116915070 13 18351312 18356609 - 116915070 MODEL JAAIVD010000008 pseudo 626046206 Nipsnap2 nipsnap homolog 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN mitochondrion organization (ortholog); mitophagy (ortholog); positive regulation of high voltage-gated calcium channel activity (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog) 16 24213118 24244743 - 30032202 116885463 MODEL JAAIVD010000004;XM_032886745 XP_032742636 protein NipSnap homolog 2 protein-coding 626046220 LOC116902795 protein MMS22-like 1 118835136 118947583 - 30032202 116902795 MODEL JAAIVD010000025;XM_032905135 XP_032761026 protein-coding 626046248 Ythdc2 YTH N6-methyladenosine RNA binding protein C2 ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); ATP-dependent activity, acting on RNA (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN germline cell cycle switching, mitotic to meiotic cell cycle (ortholog); host-mediated activation of viral genome replication (ortholog); oocyte development (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); oligospermia (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); ribonucleoprotein granule (ortholog) 2 229605940 229672170 - 22301074;30032202 116893044 MODEL JAAIVD010000001;XM_032895013 XP_032750904 3'-5' RNA helicase YTHDC2;YTH domain containing 2 protein-coding 626046282 Gpr85 G protein-coupled receptor 85 FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 6 124728134 124734376 - 22301074;30032202 116904070 MODEL JAAIVD010000024;XM_032906933 XP_032762824 probable G-protein coupled receptor 85 protein-coding 626046290 Rab11fip5 RAB11 family interacting protein 5 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); INVOLVED IN cellular response to acidic pH (ortholog); cellular response to type II interferon (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cilium (ortholog) 6 60830553 60867985 + 30032202 116903576 MODEL JAAIVD010000024;XM_032906197;XM_032906198;XM_032906199 XP_032762088;XP_032762089;XP_032762090 rab11 family-interacting protein 5 protein-coding 626046303 Slc2a12 solute carrier family 2 member 12 INVOLVED IN D-glucose transmembrane transport (ortholog); FOUND IN membrane (ortholog) 2 208679396 208733467 + 22301074 116892939 MODEL JAAIVD010000001;XM_032894883 XP_032750774 solute carrier family 2, facilitated glucose transporter member 12 protein-coding 626046312 Ccdc89 coiled-coil domain containing 89 2 110758333 110760690 - 116891853 MODEL JAAIVD010000001;XM_032893225 XP_032749116 coiled-coil domain-containing protein 89 protein-coding 626046317 LOC116910617 solute carrier family 22 member 21-like 9 36421090 36447185 - 22301074 116910617 MODEL JAAIVD010000002;XM_032914567 XP_032770458 protein-coding 626046331 LOC116888582 CXXC-type zinc finger protein 5-like X 90367582 90369877 - 116888582 MODEL JAAIVD010000014 pseudo 626046332 LOC116897222 spliceosome-associated protein CWC27 homolog 3 192540269 192567007 + 22301074;30032202 116897222 MODEL JAAIVD010000012;XM_032898943;XM_032898944 XP_032754834;XP_032754835 protein-coding 626046348 LOC116888872 lysine-specific demethylase 6A-like X 2169524 2288199 - 22301074;30032202 116888872 MODEL JAAIVD010000014;XM_032890136 XP_032746027 protein-coding 626046373 Myl10 myosin light chain 10 FOUND IN mitochondrion (ortholog) 16 17312787 17320753 - 22301074;30032202 116885480 MODEL JAAIVD010000004;XM_032886769 XP_032742660 myosin regulatory light chain 10 protein-coding 626046382 LOC116902080 cystatin-related protein 1-like 5 128559713 128566025 - 30032202 116902080 MODEL JAAIVD010000023;XM_032904371 XP_032760262 protein-coding 626046390 Slc38a10 solute carrier family 38 member 10 INVOLVED IN bone development (ortholog); FOUND IN Golgi apparatus (ortholog) 9 63860880 63910632 + 30032202 116910213 MODEL JAAIVD010000002;XM_032914094;XM_032914095;XM_032914096;XM_032914097;XM_032914098;XM_032914099;XM_032914100 XP_032769985;XP_032769986;XP_032769987;XP_032769988;XP_032769989;XP_032769990;XP_032769991 putative sodium-coupled neutral amino acid transporter 10 protein-coding 626046420 C8H11orf97 chromosome 8 C11orf97 homolog INVOLVED IN cilium assembly (ortholog); FOUND IN ciliary basal body (ortholog); ciliary base (ortholog) 8 10553812 10567832 - 30032202 116907232 MODEL JAAIVD010000027;XM_032910198 XP_032766089 uncharacterized protein C11orf97 homolog protein-coding 626046427 Bdh1 3-hydroxybutyrate dehydrogenase 1 ENCODES a protein that exhibits 3-hydroxybutyrate dehydrogenase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN adipose tissue development (ortholog); liver development (ortholog); response to cadmium ion (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ketone bodies metabolic pathway; succinyl-CoA:3-oxoacid transferase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 4 16297434 16328655 + 22301074 116898756 MODEL JAAIVD010000003;XM_032900074;XM_032900075 XP_032755965;XP_032755966 D-beta-hydroxybutyrate dehydrogenase, mitochondrial protein-coding 626046441 LOC116910338 microtubule-associated proteins 1A/1B light chain 3B-like 9 64718051 64719037 + 116910338 MODEL JAAIVD010000002 pseudo 626046442 Tollip toll interacting protein ENCODES a protein that exhibits interleukin-1, type I receptor binding (ortholog); kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); interleukin-1-mediated signaling pathway (ortholog); phosphorylation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); COVID-19 (ortholog); idiopathic pulmonary fibrosis (ortholog); FOUND IN nuclear body (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 2 7623212 7644353 + 22301074;30032202 116890854 MODEL JAAIVD010000001;XM_032891417;XM_032891418 XP_032747308;XP_032747309 toll-interacting protein protein-coding 626046455 LOC116894886 U6 spliceosomal RNA 2 91321335 91321438 - 116894886 MODEL JAAIVD010000001;XR_004387095 snrna 626046458 Mdga2 MAM domain containing glycosylphosphatidylinositol anchor 2 INVOLVED IN gene expression (ortholog); motor behavior (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 7 80226101 81028365 - 22301074;30032202 116905108 MODEL JAAIVD010000026;XM_032907845;XM_032907846;XR_004388486;XR_004388487 XP_032763736;XP_032763737 MAM domain-containing glycosylphosphatidylinositol anchor protein 2 protein-coding 626046485 Btf3 basic transcription factor 3 INVOLVED IN in utero embryonic development (ortholog); negative regulation of protein localization to endoplasmic reticulum (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nascent polypeptide-associated complex (ortholog) 3 198281434 198288406 + 30032202 116897258 MODEL JAAIVD010000012;XM_032898991;XM_032898992 XP_032754882;XP_032754883 transcription factor BTF3 protein-coding 626046498 Nup62 nucleoporin 62 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cellular senescence (ortholog); centriole assembly (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH primary biliary cholangitis (ortholog); Striatonigral Degeneration, Infantile (ortholog); FOUND IN annulate lamellae (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 154711944 154728317 - 2190987;30032202 116892193 MODEL JAAIVD010000001;X52583;XM_032893723;XM_032893724 CAA36813;XP_032749614;XP_032749615 nuclear pore glycoprotein p62 protein-coding 626046507 LOC116900164 R3H domain-containing protein 2-like 5 26118027 26181195 + 116900164 MODEL JAAIVD010000023 pseudo 626046508 LOC116887854 4F2 cell-surface antigen heavy chain-like X 43397336 43399576 - 116887854 MODEL JAAIVD010000014 pseudo 626046509 Bcl2l10 BCL2 like 10 ENCODES a protein that exhibits calcium ion binding (ortholog); caspase binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); microtubule organizing center organization (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH breast carcinoma (ortholog); multiple myeloma (ortholog); myelodysplastic syndrome (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 8 69638180 69642874 + 22301074;30032202 116906995 MODEL JAAIVD010000027;XM_032909922 XP_032765813 bcl-2-like protein 10 protein-coding 626046515 LOC116901885 dual oxidase 2 5 100386534 100405032 - 22301074;30032202 116901885 MODEL JAAIVD010000023;XM_032904092 XP_032759983 protein-coding 626046552 LOC116883452 sorting nexin-10 14 17365288 17366032 - 22301074;30032202 116883452 MODEL JAAIVD010000009;XM_032884598 XP_032740489 protein-coding 626046557 Kcnh4 potassium voltage-gated channel subfamily H member 4 9 60032173 60052125 - 22301074;30032202 116910071 MODEL JAAIVD010000002;XM_032913886 XP_032769777 protein-coding 626046578 Sncaip synuclein alpha interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN dopamine metabolic process (ortholog); regulation of inclusion body assembly (ortholog); regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 15 78835498 78971687 - 30032202 116884461 MODEL JAAIVD010000010;XM_032885561 XP_032741452 synphilin-1 protein-coding 626046594 LOC116887512 olfactory receptor 12D2-like 18 10263553 10264494 - 22301074 116887512 MODEL JAAIVD010000013;XM_032889136 XP_032745027 protein-coding 626046597 LOC116906053 endoplasmin-like 7 48590938 48599543 - 116906053 MODEL JAAIVD010000026 pseudo 626046598 Armcx2 armadillo repeat containing X-linked 2 FOUND IN mitochondrion (ortholog) X 87098645 87103468 - 22301074;30032202 116888742 MODEL JAAIVD010000014;XM_032890035;XM_032890036 XP_032745926;XP_032745927 armadillo repeat-containing X-linked protein 2 protein-coding 626046609 Clrn2 clarin 2 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); inner ear auditory receptor cell differentiation (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 117 (ortholog); FOUND IN stereocilium bundle (ortholog) 11 60417154 60425513 - 116912090 MODEL JAAIVD010000006;XM_032915976 XP_032771867 clarin-2 protein-coding 626046614 Tprkb TP53RK binding protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 5 (ortholog); nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); EKC/KEOPS complex (ortholog) 6 60392938 60406817 - 30032202 116903564 MODEL JAAIVD010000024;XM_032906180;XM_032906181;XM_032906183 XP_032762071;XP_032762072;XP_032762074 EKC/KEOPS complex subunit TPRKB protein-coding 626046632 LOC116907663 tetratricopeptide repeat protein 41 1 165831848 165897081 + 22301074;30032202 116907663 MODEL JAAIVD010000025;XM_032910758 XP_032766649 protein-coding 626046652 Rbm42 RNA binding motif protein 42 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); FOUND IN spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) 2 165355215 165364892 + 30032202 116892306 MODEL JAAIVD010000001;XM_032893923;XM_032893924 XP_032749814;XP_032749815 RNA-binding protein 42 protein-coding 626046668 LOC116904051 potassium voltage-gated channel subfamily D member 2-like 6 117406746 117424953 - 22301074;30032202 116904051 MODEL JAAIVD010000024;XM_032906909 XP_032762800 protein-coding 626046677 LOC116914172 U6 spliceosomal RNA 12 77548879 77548985 - 116914172 MODEL JAAIVD010000007;XR_004389716 snrna 626046680 Il1a interleukin 1 alpha ENCODES a protein that exhibits copper ion binding (ortholog); cytokine activity (ortholog); INVOLVED IN cellular response to heat (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); allergic bronchopulmonary aspergillosis (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular space (ortholog) 5 108058889 108069183 - 22301074;30032202 116901959 MODEL JAAIVD010000023;XM_032904198 XP_032760089 interleukin-1 alpha protein-coding 626046691 LOC116909506 cytochrome c oxidase subunit 6A1, mitochondrial-like 9 56476144 56476661 + 116909506 MODEL JAAIVD010000002 pseudo 626046692 Rasgef1c RasGEF domain family member 1C 9 32574007 32638328 + 22301074;30032202 116909916 MODEL JAAIVD010000002;XM_032913677 XP_032769568 ras-GEF domain-containing family member 1C protein-coding 626046710 LOC116901075 zinc finger protein 239-like 5 142953221 142981658 - 30032202 116901075 MODEL JAAIVD010000023;XM_032902641 XP_032758532 protein-coding 626046720 Wdr83 WD repeat domain 83 INVOLVED IN inflammatory response to wounding (ortholog); mRNA splicing, via spliceosome (ortholog); neural tube closure (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 17 15211668 15217127 + 22301074;30032202 116886222 MODEL JAAIVD010000011;XM_032887614 XP_032743505 WD repeat domain-containing protein 83 protein-coding 626046733 LOC116888615 uncharacterized LOC116888615 X 87654347 87661165 - 116888615 MODEL JAAIVD010000014;XR_004386328 ncrna 626046738 Prph peripherin ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN axon (ortholog); C-fiber (ortholog); intermediate filament (ortholog) 1 271888131 271891992 + 30032202 116884953 MODEL JAAIVD010000025;XM_032886157 XP_032742048 protein-coding 626046750 LOC116904366 40S ribosomal protein S6-like 6 83943462 83944164 - 116904366 MODEL JAAIVD010000024 pseudo 626046751 Gtf3c4 general transcription factor IIIC subunit 4 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); RNA polymerase III general transcription initiation factor activity (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); transcription factor TFIIIC complex (ortholog) 5 7831871 7847606 + 22301074;30032202 116901223 MODEL JAAIVD010000023;XM_032902949;XM_032902950;XM_032902951 XP_032758840;XP_032758841;XP_032758842 general transcription factor 3C polypeptide 4 protein-coding 626046770 LOC116898875 OX-2 membrane glycoprotein 4 30143449 30162533 - 22301074;30032202 116898875 MODEL JAAIVD010000003;XM_032900243;XM_032900244;XM_032900245;XM_032900246 XP_032756134;XP_032756135;XP_032756136;XP_032756137 protein-coding 626046790 LOC116909155 thymosin beta-10-like 9 11363224 11363568 - 22301074;30032202 116909155 MODEL JAAIVD010000002;XM_032912639 XP_032768530 protein-coding 626046796 Fat3 FAT atypical cadherin 3 INVOLVED IN amacrine cell differentiation (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); interneuron migration (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); esophagus squamous cell carcinoma (ortholog); Hirschsprung's disease (ortholog); FOUND IN dendrite (ortholog) 8 11640317 12096895 - 22301074 116907953 MODEL JAAIVD010000027;XM_032911174;XM_032911175;XM_032911176;XM_032911177 XP_032767065;XP_032767066;XP_032767067;XP_032767068 protocadherin Fat 3 protein-coding 626046831 LOC116887727 U2 spliceosomal RNA 18 28294430 28294619 + 116887727 MODEL JAAIVD010000013;XR_004386241 snrna 626046834 Tbc1d21 TBC1 domain family member 21 ENCODES a protein that exhibits actin binding (ortholog); GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); regulation of cilium assembly (ortholog); sperm axoneme assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); sperm midpiece (ortholog) 8 52224568 52236487 - 30032202 116907694 MODEL JAAIVD010000027;XM_032910801;XM_032910802;XM_032910803 XP_032766692;XP_032766693;XP_032766694 protein-coding 626046854 LOC116906396 U1 spliceosomal RNA 7 68101698 68101861 + 116906396 MODEL JAAIVD010000026;XR_004388664 snrna 626046857 Dph5 diphthamide biosynthesis 5 ENCODES a protein that exhibits diphthine methyl ester synthase activity (ortholog); INVOLVED IN protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH neurodevelopmental disorder with short stature, prominent forehead, and feeding difficulties (ortholog); FOUND IN cytosol (ortholog) 3 43799025 43826227 - 22301074;30032202 116896339 MODEL JAAIVD010000012;XM_032897442 XP_032753333 diphthine methyl ester synthase protein-coding 626046869 Shoc1 shortage in chiasmata 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN reciprocal meiotic recombination (ortholog); resolution of meiotic recombination intermediates (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure 75 (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog) 1 92313667 92396325 + 22301074;30032202 116888451 MODEL JAAIVD010000025;XM_032889733 XP_032745624 protein shortage in chiasmata 1 ortholog protein-coding 626046901 Cd14 CD14 molecule ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); lipopolysaccharide immune receptor activity (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to diacyl bacterial lipopeptide (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN cardiovascular system disease pathway; innate immune response pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); allergic disease (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 15 7657467 7659320 + 22301074;30032202 116884786 MODEL JAAIVD010000010;XM_032886019 XP_032741910 monocyte differentiation antigen CD14 protein-coding 626046907 LOC116891865 zinc finger protein 14-like 2 112793527 112810159 + 22301074 116891865 MODEL JAAIVD010000001;XM_032893265 XP_032749156 protein-coding 626046916 Icos inducible T cell costimulator ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); T cell costimulation (ortholog); T cell tolerance induction (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); arteriosclerosis (ortholog); celiac disease (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 135033429 135067539 + 30032202 116898193 MODEL JAAIVD010000003;XM_032899558 XP_032755449 inducible T-cell costimulator protein-coding 626046926 LOC116893170 olfactory receptor 52J3-like 2 103059812 103060810 + 22301074 116893170 MODEL JAAIVD010000001;XM_032895080 XP_032750971 protein-coding 626046929 Slc25a25 solute carrier family 25 member 25 ENCODES a protein that exhibits ATP:phosphate antiporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); ATP metabolic process (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); High Myopia (ortholog); nephrolithiasis (ortholog); FOUND IN mitochondrion (ortholog) 5 3186787 3219274 + 22301074;30032202 116901146 MODEL JAAIVD010000023;XM_032902754;XM_032902755;XM_032902756;XM_032902757;XM_032902758;XM_032902759 XP_032758645;XP_032758646;XP_032758647;XP_032758648;XP_032758649;XP_032758650 calcium-binding mitochondrial carrier protein SCaMC-2 protein-coding 626046957 Vcan versican ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine phosphatase activator activity (ortholog); INVOLVED IN axon regeneration (ortholog); glial cell migration (ortholog); heart development (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); basal cell carcinoma (ortholog); endometriosis (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 3 206529809 206627680 + 22301074 116897311 MODEL JAAIVD010000012;XM_032899060;XM_032899062;XM_032899063 XP_032754951;XP_032754953;XP_032754954 versican core protein protein-coding 626046982 LOC116888244 RBPJ-interacting and tubulin-associated protein 1-like X 66105678 66106431 + 22301074;30032202 116888244 MODEL JAAIVD010000014;XM_032889531 XP_032745422 protein-coding 626046986 LOC116888967 igE-binding protein-like X 7656608 7664319 + 22301074 116888967 MODEL JAAIVD010000014;XM_032890196 XP_032746087 protein-coding 626046990 Mfsd2a MFSD2 lysolipid transporter A, lysophospholipid ENCODES a protein that exhibits fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); lysophosphatidylcholine flippase activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to starvation (ortholog); cognition (ortholog); ASSOCIATED WITH cryptorchidism (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 35294077 35308679 + 30032202 116897159 MODEL JAAIVD010000025;XM_032898833 XP_032754724 major facilitator superfamily domain containing 2A;sodium-dependent lysophosphatidylcholine symporter 1 protein-coding 626047008 LOC116912639 UDP-glucuronosyltransferase 2B15-like 11 1669483 1699744 + 22301074 116912639 MODEL JAAIVD010000006;XM_032916757 XP_032772648 protein-coding 626047015 Uhrf1 ubiquitin like with PHD and ring finger domains 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); hemi-methylated DNA-binding (ortholog); histone binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); mitotic spindle assembly (ortholog); negative regulation of gene expression via chromosomal CpG island methylation (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Colonic Neoplasms (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 4 87693066 87712181 + 22301074;30032202 116899180 MODEL JAAIVD010000003;XM_032900751;XM_032900752;XM_032900753 XP_032756642;XP_032756643;XP_032756644 E3 ubiquitin-protein ligase UHRF1 protein-coding 626047043 Kalrn kalirin RhoGEF kinase ENCODES a protein that exhibits enzyme binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); axonogenesis (ortholog); habituation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH cerebral atherosclerosis (ortholog); cerebral infarction (ortholog); coronary artery disease (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 4 18771003 19308825 - 22301074;30032202 116898800 MODEL JAAIVD010000003;XM_032900150 XP_032756041 kalirin protein-coding 626047107 Bcap29 B cell receptor associated protein 29 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); protein localization to endoplasmic reticulum exit site (ortholog) 7 44971317 45007897 - 30032202 116904958 MODEL JAAIVD010000026;XM_032907617;XM_032907618 XP_032763508;XP_032763509 B-cell receptor-associated protein 29 protein-coding 626047122 LOC116900490 olfactory receptor 4B1-like 5 71762403 71763329 - 22301074 116900490 MODEL JAAIVD010000023;XM_032902225 XP_032758116 protein-coding 626047125 LOC116888888 uncharacterized LOC116888888 X 8991903 9009771 - 116888888 MODEL JAAIVD010000014;XR_004386353 ncrna 626047130 St3gal3 ST3 beta-galactoside alpha-2,3-sialyltransferase 3 ENCODES a protein that exhibits beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); INVOLVED IN obsolete ganglioside biosynthetic process via lactosylceramide (ortholog); protein glycosylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 12 (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 1 (ortholog) 1 38887386 39091287 + 22301074;30032202 116897945 MODEL JAAIVD010000025;XM_032899348;XM_032899356;XM_032899363;XM_032899366;XM_032899374;XM_032899381 XP_032755239;XP_032755247;XP_032755254;XP_032755257;XP_032755265;XP_032755272 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase protein-coding 626047159 Ndufa8 NADH:ubiquinone oxidoreductase subunit A8 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH Nuclear Type Mitochondrial Complex I Deficiency 37 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 5 13428445 13444177 + 30032202 116901343 MODEL JAAIVD010000023;XM_032903177 XP_032759068 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8 protein-coding 626047167 Apoa2 apolipoprotein A2 ENCODES a protein that exhibits apolipoprotein receptor binding (ortholog); cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular response to amyloid-beta (ortholog); cellular response to lipoprotein particle stimulus (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH APOLIPOPROTEIN A-II DEFICIENCY (ortholog); coronary artery disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN chylomicron (ortholog); extracellular space (ortholog); high-density lipoprotein particle (ortholog) 10 50389638 50391164 + 22301074;30032202 116911183 MODEL JAAIVD010000005;XM_032915050;XM_032915051 XP_032770941;XP_032770942 apolipoprotein A-II protein-coding 626047179 LOC116912945 small nucleolar RNA SNORD21 11 17705710 17705803 + 116912945 MODEL JAAIVD010000006;XR_004389513 snorna 626047182 Tmem221 transmembrane protein 221 13 13406849 13412091 + 116914479 MODEL JAAIVD010000008;XM_032918781;XM_032918782 XP_032774672;XP_032774673 protein-coding 626047193 Rin3 Ras and Rab interactor 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of mast cell chemotaxis (ortholog); negative regulation of receptor internalization (ortholog); regulation of vesicle size (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); Paget's disease of bone (ortholog); squamous cell carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 7 113603298 113676576 + 22301074;30032202 116905355 MODEL JAAIVD010000026;XM_032908270 XP_032764161 protein-coding 626047206 LOC116911536 leucine-rich repeat-containing G-protein coupled receptor 6-like 10 681478 709151 + 22301074;30032202 116911536 MODEL JAAIVD010000005;XM_032915525 XP_032771416 protein-coding 626047217 LOC116907176 putative gustatory receptor clone PTE38 8 15282808 15283752 - 22301074;30032202 116907176 MODEL JAAIVD010000027;XM_032910135 XP_032766026 protein-coding 626047221 LOC116903214 testis-expressed protein 52-like 6 19294175 19325947 - 22301074 116903214 MODEL JAAIVD010000024;XM_032905589;XM_032905590 XP_032761480;XP_032761481 nuclear receptor-interacting protein 2-like protein-coding 626047236 LOC116885292 inactive 2'-5'-oligoadenylate synthase 1D-like 16 33017339 33026331 + 22301074;30032202 116885292 MODEL JAAIVD010000004;XM_032886541 XP_032742432 protein-coding 626047246 LOC116888380 eukaryotic translation initiation factor 1-like 1 229725898 229726278 - 116888380 MODEL JAAIVD010000025 pseudo 626047247 LOC116890211 keratin, type II cuticular Hb1 1 261616731 261621476 + 22301074;30032202 116890211 MODEL JAAIVD010000025;XM_032890948 XP_032746839 protein-coding 626047259 LOC116912039 glyceraldehyde-3-phosphate dehydrogenase-like 11 79644991 79648532 - 22301074;30032202 116912039 MODEL JAAIVD010000006;XM_032915920 XP_032771811 protein-coding 626047263 Cmbl carboxymethylenebutenolidase homolog 3 149233354 149250729 - 22301074 116897046 MODEL JAAIVD010000012;XM_032898667;XM_032898668 XP_032754558;XP_032754559 protein-coding 626047276 LOC116907219 olfactory receptor 8B8-like 8 32544899 32545839 + 116907219 MODEL JAAIVD010000027 pseudo 626047277 Tsc22d1 TSC22 domain family member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of hematopoietic stem cell proliferation (ortholog); negative regulation of programmed cell death (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 12 47895455 47996700 - 22301074 116913462 MODEL JAAIVD010000007;XM_032917663;XM_032917664;XM_032917665;XR_004389617;XR_004389618 XP_032773554;XP_032773555;XP_032773556 TSC22 domain family protein 1 protein-coding 626047297 Apobec4 apolipoprotein B mRNA editing enzyme catalytic polypeptide like 4 10 32203612 32211262 + 116911428 MODEL JAAIVD010000005;XM_032915397 XP_032771288 putative C->U-editing enzyme APOBEC-4 protein-coding 626047303 LOC116901022 serine/arginine-rich splicing factor 3-like 5 129048449 129050804 + 116901022 MODEL JAAIVD010000023 pseudo 626047304 Cmtm7 CKLF like MARVEL transmembrane domain containing 7 INVOLVED IN B-1a B cell differentiation (ortholog) 8 105362320 105393692 - 22301074 116907845 MODEL JAAIVD010000027;XM_032911033 XP_032766924 CKLF-like MARVEL transmembrane domain-containing protein 7 protein-coding 626047313 Ttll9 tubulin tyrosine ligase like 9 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); polycystic ovary syndrome (ortholog); pre-malignant neoplasm (ortholog); FOUND IN ciliary basal body (ortholog) 5 132301400 132326977 + 22301074;30032202 116902131 MODEL JAAIVD010000023;XM_032904457;XM_032904458 XP_032760348;XP_032760349 probable tubulin polyglutamylase TTLL9 protein-coding 626047334 Nek3 NIMA related kinase 3 INVOLVED IN establishment of cell polarity (ortholog); neuron projection morphogenesis (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 13 64275773 64300241 + 22301074 116914744 MODEL JAAIVD010000008;XM_032919183;XM_032919184;XM_032919185;XM_032919186;XM_032919187;XM_032919188 XP_032775074;XP_032775075;XP_032775076;XP_032775077;XP_032775078;XP_032775079 serine/threonine-protein kinase Nek3 protein-coding 626047367 LOC116889972 40S ribosomal protein S20-like 1 162685653 162686400 - 116889972 MODEL JAAIVD010000025 pseudo 626047368 Acap3 ArfGAP with coiled-coil, ankyrin repeat and PH domains 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN neuron migration (ortholog); regulation of neuron projection development (ortholog); FOUND IN growth cone (ortholog) 1 4724167 4738479 - 22301074;30032202 116891437 MODEL JAAIVD010000025;XM_032892502 XP_032748393 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 3 protein-coding 626047396 Ptk2b protein tyrosine kinase 2 beta ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); calcium/calmodulin-dependent protein kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN actin filament organization (ortholog); activation of GTPase activity (ortholog); activation of Janus kinase activity (ortholog); PARTICIPATES IN endothelin signaling pathway; fibroblast growth factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); bone disease (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); cell body (ortholog) 12 58181104 58300991 + 22301074 116913824 MODEL JAAIVD010000007;XM_032918138 XP_032774029 protein-tyrosine kinase 2-beta protein-coding 626047431 Cog2 component of oligomeric golgi complex 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIq (ortholog); FOUND IN Golgi stack (ortholog); Golgi transport complex (ortholog) 17 44045446 44079051 + 30032202 116886205 MODEL JAAIVD010000011;XM_032887591 XP_032743482 conserved oligomeric Golgi complex subunit 2 protein-coding 626047453 LOC116895708 60S ribosomal protein L17-like 3 214729412 214729978 + 116895708 MODEL JAAIVD010000012 pseudo 626047454 Cpxm2 carboxypeptidase X, M14 family member 2 ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog) 2 69683283 69793852 + 22301074 116891400 MODEL JAAIVD010000001;XM_032892424 XP_032748315 inactive carboxypeptidase-like protein X2 protein-coding 626047471 Epb41l3 erythrocyte membrane protein band 4.1 like 3 INVOLVED IN axon development (ortholog); myelin maintenance (ortholog); neuron projection morphogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); meningioma (ortholog); FOUND IN axolemma (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 4 178779526 178903179 + 22301074;30032202 116899704 MODEL JAAIVD010000003;XM_032901729 XP_032757620 band 4.1-like protein 3 protein-coding 626047498 LOC116913853 tubulin beta-5 chain-like 12 77823520 77824522 - 116913853 MODEL JAAIVD010000007 pseudo 626047499 Depdc5 DEP domain containing 5, GATOR1 subcomplex subunit ENCODES a protein that exhibits protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); cytoplasmic translation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Developmental and Epileptic Encephalopathy 111 (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); GATOR1 complex (ortholog) 11 71845445 71982837 - 22301074;30032202 116911944 MODEL JAAIVD010000006;XM_032915845;XM_032915847;XM_032915848;XM_032915849;XM_032915850;XM_032915851;XM_032915852;XM_032915853;XM_032915854;XM_032915855 XP_032771736;XP_032771738;XP_032771739;XP_032771740;XP_032771741;XP_032771742;XP_032771743;XP_032771744;XP_032771745;XP_032771746 GATOR complex protein DEPDC5 protein-coding 626047569 Susd4 sushi domain containing 4 INVOLVED IN negative regulation of complement activation, alternative pathway (ortholog); negative regulation of complement activation, classical pathway (ortholog); regulation of complement activation (ortholog); FOUND IN parallel fiber to Purkinje cell synapse (ortholog); postsynaptic membrane (ortholog) 10 61063097 61187259 + 30032202 116911133 MODEL JAAIVD010000005;XM_032914980 XP_032770871 sushi domain-containing protein 4 protein-coding 626047582 Accs 1-aminocyclopropane-1-carboxylate synthase homolog (inactive) ENCODES a protein that exhibits 1-aminocyclopropane-1-carboxylate synthase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 5 68007529 68021760 - 22301074;30032202 116901655 MODEL JAAIVD010000023;XM_032903765 XP_032759656 1-aminocyclopropane-1-carboxylate synthase-like protein 1 protein-coding 626047601 Dcp2 decapping mRNA 2 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); 5'-3' RNA exonuclease activity (ortholog); telomerase RNA binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mRNA catabolic process (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN cell junction (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 15 24188625 24221487 + 22301074;30032202 116884971 MODEL JAAIVD010000010;XM_032886177 XP_032742068 m7GpppN-mRNA hydrolase protein-coding 626047616 Cdk12 cyclin dependent kinase 12 ENCODES a protein that exhibits cyclin binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH gastric adenocarcinoma (ortholog); hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); nuclear cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog) 9 56125062 56188899 - 22301074;30032202 116910209 MODEL JAAIVD010000002;XM_032914084;XM_032914085;XM_032914086;XM_032914087;XM_032914088 XP_032769975;XP_032769976;XP_032769977;XP_032769978;XP_032769979 cyclin-dependent kinase 12 protein-coding 626047645 LOC116897926 transmembrane protein 254-like 4 42750089 42750501 + 116897926 MODEL JAAIVD010000003;XM_032899326 XP_032755217 protein-coding 626047649 LOC116894605 vomeronasal type-1 receptor 2-like 2 182172339 182173229 - 22301074;30032202 116894605 MODEL JAAIVD010000001;XM_032896322 XP_032752213 protein-coding 626047652 Srek1ip1 SREK1 interacting protein 1 3 192516385 192540206 - 22301074 116897221 MODEL JAAIVD010000012;XM_032898942 XP_032754833 protein SREK1IP1 protein-coding 626047661 Tfb1m transcription factor B1, mitochondrial ENCODES a protein that exhibits rRNA (adenine-N6,N6-)-dimethyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN rRNA methylation (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 2 195204374 195244701 + 22301074;30032202 116892864 MODEL JAAIVD010000001;XM_032894766 XP_032750657 dimethyladenosine transferase 1, mitochondrial protein-coding 626047672 LOC116887483 uncharacterized LOC116887483 18 9162230 9164707 + 116887483 MODEL JAAIVD010000013;XR_004386220 ncrna 626047676 LOC116915148 U4 spliceosomal RNA 13 43564777 43564909 - 116915148 MODEL JAAIVD010000008 pseudo 626047677 LOC116904807 U6 spliceosomal RNA 6 81346769 81346875 + 116904807 MODEL JAAIVD010000024;XR_004388458 snrna 626047680 LOC116895949 actin-related protein 2/3 complex subunit 1A-like 3 136536632 136538373 + 116895949 MODEL JAAIVD010000012 pseudo 626047681 Col1a1 collagen type I alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); identical protein binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); bone trabecula formation (ortholog); cartilage development involved in endochondral bone morphogenesis (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH aggressive periodontitis (ortholog); alcoholic hepatitis (ortholog); aortic valve insufficiency (ortholog); FOUND IN collagen trimer (ortholog); collagen type I trimer (ortholog); cytoplasm (ortholog) 9 59427992 59444926 - 22301074 116909198 MODEL JAAIVD010000002;XM_032912698 XP_032768589 collagen alpha-1(I) chain protein-coding 626047736 Spef1 sperm flagellar 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN axonemal central apparatus assembly (ortholog); cilium movement (ortholog); filopodium assembly (ortholog); FOUND IN 9+2 motile cilium (ortholog); apical plasma membrane (ortholog); axonemal central apparatus (ortholog) 5 110897594 110903832 - 30032202 116901986 MODEL JAAIVD010000023;XM_032904235 XP_032760126 sperm flagellar protein 1 protein-coding 626047747 LOC116901877 uncharacterized LOC116901877 5 100109014 100112275 + 116901877 MODEL JAAIVD010000023;XR_004388028 ncrna 626047751 Tbc1d20 TBC1 domain family member 20 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN acrosome assembly (ortholog); camera-type eye development (ortholog); COPII-coated vesicle cargo loading (ortholog); ASSOCIATED WITH genetic disease (ortholog); Warburg micro syndrome (ortholog); Warburg micro syndrome 4 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 5 131621061 131637182 + 30032202 116902118 MODEL JAAIVD010000023;XM_032904433 XP_032760324 protein-coding 626047763 LOC116906483 small nucleolar RNA SNORA26 7 72422059 72422180 + 116906483 MODEL JAAIVD010000026;XR_004388726 snorna 626047766 Yeats2 YEATS domain containing 2 ENCODES a protein that exhibits histone binding (ortholog); histone reader activity (ortholog); modification-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH breast ductal carcinoma (ortholog); Disease Progression (ortholog); familial adult myoclonic epilepsy (ortholog); FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 4 4949910 5032365 + 30032202 116898686 MODEL JAAIVD010000003;XM_032899944;XM_032899945 XP_032755835;XP_032755836 YEATS domain-containing protein 2 protein-coding 626047806 LOC116884399 prostaglandin reductase 2-like 15 64635259 64707447 + 116884399 MODEL JAAIVD010000010 pseudo 626047807 LOC116906610 uncharacterized LOC116906610 8 65351746 65368193 + 116906610 MODEL JAAIVD010000027;XR_004388755 ncrna 626047811 LOC116906476 small nucleolar RNA SNORA17 7 92226108 92226220 + 116906476 MODEL JAAIVD010000026 pseudo 626047812 LOC116912542 elongation factor 1-gamma-like 11 50486171 50487581 + 22301074;30032202 116912542 MODEL JAAIVD010000006;XM_032916644 XP_032772535 protein-coding 626047817 LOC116899886 small nucleolar RNA SNORA17 4 73887726 73887853 - 116899886 MODEL JAAIVD010000003;XR_004387870 snorna 626047820 Ktn1 kinectin 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 75301291 75365928 - 22301074;30032202 116913979 MODEL JAAIVD010000007;XM_032918251;XM_032918252;XM_032918253;XM_032918254;XM_032918255;XM_032918256;XM_032918257;XM_032918259 XP_032774142;XP_032774143;XP_032774144;XP_032774145;XP_032774146;XP_032774147;XP_032774148;XP_032774150 kinectin protein-coding 626047874 LOC116895725 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like 3 223007779 223008257 - 116895725 MODEL JAAIVD010000012 pseudo 626047875 LOC116895024 small nucleolar RNA SNORA17 2 141118761 141118892 + 116895024 MODEL JAAIVD010000001;XR_004387210 snorna 626047878 Vsig10l V-set and immunoglobulin domain containing 10 like ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) 2 156006627 156014736 - 116892234 MODEL JAAIVD010000001;XM_032893805 XP_032749696 V-set and immunoglobulin domain-containing protein 10-like protein-coding 626047892 LOC116896439 60S ribosomal protein L36a-like 3 54207008 54207312 + 116896439 MODEL JAAIVD010000012 pseudo 626047893 LOC116889782 ribosomal RNA small subunit methyltransferase H-like 30032202 116889782 MODEL JAAIVD010000239;XM_032890634 XP_032746525 protein-coding 626047894 Gfra2 GDNF family receptor alpha 2 ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); negative regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); Parkinsonism (ortholog); FOUND IN plasma membrane (ortholog) 12 53396002 53493497 - 22301074;30032202 116913640 MODEL JAAIVD010000007;XM_032917909 XP_032773800 GDNF family receptor alpha-2 protein-coding 626047907 LOC116905845 eukaryotic translation initiation factor 1-like 7 12400052 12400699 - 22301074;30032202 116905845 MODEL JAAIVD010000026;XM_032908816 XP_032764707 protein-coding 626047912 LOC116904326 ubiquitin-40S ribosomal protein S27a-like 6 63378529 63379068 + 22301074;30032202 116904326 MODEL JAAIVD010000024;XM_032907234 XP_032763125 protein-coding 626047916 Arl2 ARF like GTPase 2 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN acetylcholine transport (ortholog); centrosome cycle (ortholog); maintenance of protein location in nucleus (ortholog); ASSOCIATED WITH melanoma (ortholog); Microcornea, Rod-Cone Dystrophy, Cataract, and Posterior Staphyloma 1 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 2 1542968 1549531 + 22301074;30032202 116890671 MODEL JAAIVD010000001;XM_032891077;XM_032891078 XP_032746968;XP_032746969 ADP ribosylation factor like GTPase 2;ADP-ribosylation factor-like protein 2 protein-coding 626047929 Hmgxb4 HMG-box containing 4 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN NURF complex (ortholog) 17 4377745 4417794 + 116886591 MODEL JAAIVD010000011;XM_032888114 XP_032744005 HMG domain-containing protein 4 protein-coding 626047944 Tmem39b transmembrane protein 39B 1 28450605 28470278 + 30032202 116896038 MODEL JAAIVD010000025;XM_032897042 XP_032752933 protein-coding 626047957 LOC116913605 olfactory receptor 150-like 12 94182 95129 - 22301074;30032202 116913605 MODEL JAAIVD010000007;XM_032917855 XP_032773746 protein-coding 626047960 LOC116900258 olfactory receptor 1019 ENCODES a protein that exhibits copper ion binding (ortholog); odorant binding (ortholog); olfactory receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); FOUND IN plasma membrane (ortholog) 5 63159509 63160441 - 22301074;30032202 116900258 MODEL JAAIVD010000023;XM_032902009 XP_032757900 protein-coding 626047963 Polr3c RNA polymerase III subunit C ENCODES a protein that exhibits single-stranded DNA binding (ortholog); INVOLVED IN positive regulation of innate immune response (ortholog); positive regulation of interferon-beta production (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); FOUND IN nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 3 60579905 60594800 + 22301074;30032202 116896499 MODEL JAAIVD010000012;XM_032897674 XP_032753565 DNA-directed RNA polymerase III subunit RPC3 protein-coding 626047982 LOC116898246 nuclear body protein SP140-like protein 4 157876792 157897481 - 22301074;30032202 116898246 MODEL JAAIVD010000003;XM_032899596 XP_032755487 protein-coding 626047993 LOC116906342 small nucleolar RNA SNORA73 family 7 86830712 86830915 - 116906342 MODEL JAAIVD010000026;XR_004388622 snorna 626047996 Ints4 integrator complex subunit 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 2 95797462 95864509 + 30032202 116891700 MODEL JAAIVD010000001;XM_032892966 XP_032748857 protein-coding 626048023 LOC116914175 U6 spliceosomal RNA 12 93596051 93596167 + 116914175 MODEL JAAIVD010000007 pseudo 626048024 LOC116900327 olfactory receptor 10AG1-like 5 64494768 64495748 + 22301074 116900327 MODEL JAAIVD010000023;XM_032902083 XP_032757974 protein-coding 626048027 Cdca3 cell division cycle associated 3 ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN adherens junction (ortholog) 6 23058377 23061553 - 116903276 MODEL JAAIVD010000024;XM_032905696 XP_032761587 cell division cycle-associated protein 3 protein-coding 626048037 LOC116886998 class I histocompatibility antigen, Gogo-B*0201 alpha chain-like 18 10484416 10486872 - 30032202 116886998 MODEL JAAIVD010000013;XM_032888480;XM_032888481 XP_032744371;XP_032744372 protein-coding 626048049 Asb13 ankyrin repeat and SOCS box containing 13 14 17983907 17999208 + 22301074;30032202 116883741 MODEL JAAIVD010000009;XM_032884971 XP_032740862 ankyrin repeat and SOCS box protein 13 protein-coding 626048059 LOC116892834 F-box only protein 44 1 12619556 12628801 + 22301074;30032202 116892834 MODEL JAAIVD010000025;XM_032894724;XM_032894730;XM_032894737;XM_032894746;XM_032894753;XM_032894761 XP_032750615;XP_032750621;XP_032750628;XP_032750637;XP_032750644;XP_032750652 uncharacterized protein LOC116892834 protein-coding 626048087 Bok BCL2 family apoptosis regulator BOK ENCODES a protein that exhibits BH domain binding (ortholog); protein dimerization activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular component disassembly involved in execution phase of apoptosis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH hydrocephalus (ortholog); FOUND IN cis-Golgi network membrane (ortholog); cytoplasm (ortholog); early endosome membrane (ortholog) 4 165611574 165622485 + 22301074;30032202 116899669 MODEL JAAIVD010000003;XM_032901683 XP_032757574 bcl-2-related ovarian killer protein protein-coding 626048096 LOC116913164 high mobility group protein HMG-I/HMG-Y-like 12 48267828 48268243 - 116913164 MODEL JAAIVD010000007 pseudo 626048097 LOC116887736 small nucleolar RNA SNORA17 18 32201971 32202072 + 116887736 MODEL JAAIVD010000013 pseudo 626048098 LOC116888659 L-lactate dehydrogenase A chain-like X 61397518 61398517 - 116888659 MODEL JAAIVD010000014 pseudo 626048099 Nf2 NF2, moesin-ezrin-radixin like (MERLIN) tumor suppressor ENCODES a protein that exhibits beta-catenin binding (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); brain development (ortholog); cell-cell junction organization (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); breast cancer (ortholog); choroid plexus carcinoma (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); cell body (ortholog) 11 73743707 73826394 - 22301074;30032202 116912826 MODEL JAAIVD010000006;XM_032917006;XM_032917007;XM_032917008;XM_032917009 XP_032772897;XP_032772898;XP_032772899;XP_032772900 merlin;neurofibromin 2 protein-coding 626048130 Ap2m1 adaptor related protein complex 2 subunit mu 1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); signal sequence binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); negative regulation of protein localization to plasma membrane (ortholog); positive regulation of receptor internalization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 60 with seizures (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog) 4 5374150 5382795 + 22301074;30032202 116898693 MODEL JAAIVD010000003;XM_032899952;XM_032899953 XP_032755843;XP_032755844 AP-2 complex subunit mu protein-coding 626048150 LOC116884492 uncharacterized LOC116884492 15 65749524 65753926 + 116884492 MODEL JAAIVD010000010;XR_004385872 ncrna 626048154 LOC116908093 acrosomal protein SP-10-like 8 32868935 32874568 + 116908093 MODEL JAAIVD010000027;XM_032911375 XP_032767266 protein-coding 626048160 LOC116888713 serine/threonine-protein kinase WNK3-like X 21333220 21364572 - 30032202 116888713 MODEL JAAIVD010000014;XM_032890000 XP_032745891 protein-coding 626048172 LOC116891619 uncharacterized LOC116891619 2 85032752 85037397 - 116891619 MODEL JAAIVD010000001;XR_004386852 ncrna 626048176 Igsf3 immunoglobulin superfamily member 3 INVOLVED IN lacrimal gland development (ortholog); ASSOCIATED WITH esophageal atresia (ortholog); lacrimal duct obstruction (ortholog); Lacrimal Puncta Agenesis (ortholog) 3 56607714 56692505 - 116896461 MODEL JAAIVD010000012;XM_032897621;XM_032897622;XM_032897623;XM_032897624 XP_032753512;XP_032753513;XP_032753514;XP_032753515 protein-coding 626048200 Tmem240 transmembrane protein 240 ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 21 (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); parallel fiber to Purkinje cell synapse (ortholog); postsynaptic density membrane (ortholog) 1 4888131 4893450 - 116891751 MODEL JAAIVD010000025;XM_032893068 XP_032748959 protein-coding 626048207 Klhdc1 kelch domain containing 1 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 82899946 82946456 + 22301074 116905116 MODEL JAAIVD010000026;XM_032907855 XP_032763746 kelch domain-containing protein 1 protein-coding 626048224 LOC116909345 nucleolar protein 16-like 9 27175793 27176478 + 116909345 MODEL JAAIVD010000002 pseudo 626048225 LOC116900239 putative olfactory receptor 5AK3 5 62774640 62775587 - 22301074;30032202 116900239 MODEL JAAIVD010000023;XM_032901989 XP_032757880 protein-coding 626048228 LOC116883636 glyceraldehyde-3-phosphate dehydrogenase-like 14 38903482 38904490 + 116883636 MODEL JAAIVD010000009 pseudo 626048229 LOC116895505 fructose-bisphosphate aldolase A-like 3 108738495 108739727 + 116895505 MODEL JAAIVD010000012 pseudo 626048230 Dnajc1 DnaJ heat shock protein family (Hsp40) member C1 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN protein folding (ortholog); regulation of protein secretion (ortholog); regulation of translation (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 14 5592872 5752652 + 30032202 116884026 MODEL JAAIVD010000009;XM_032885262 XP_032741153 dnaJ homolog subfamily C member 1 protein-coding 626048246 LOC116895716 L-lactate dehydrogenase A chain-like 3 219372573 219373598 - 116895716 MODEL JAAIVD010000012 pseudo 626048247 LOC116890355 U6 spliceosomal RNA 1 182242221 182242329 + 116890355 MODEL JAAIVD010000025;XR_004386574 snrna 626048250 LOC116895235 uncharacterized LOC116895235 3 21588490 21617999 + 116895235 MODEL JAAIVD010000012;XM_032896559 XP_032752450 uncharacterized protein LOC116895235 protein-coding 626048261 Slc45a2 solute carrier family 45 member 2 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); sucrose:proton symporter activity (ortholog); INVOLVED IN developmental pigmentation (ortholog); lysosomal lumen pH elevation (ortholog); melanin biosynthetic process from tyrosine (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-4 (ortholog); basal cell carcinoma (ortholog); genetic disease (ortholog); FOUND IN melanosome membrane (ortholog) 3 169728271 169760387 - 22301074;30032202 116895615 MODEL JAAIVD010000012;XM_032896826 XP_032752717 membrane-associated transporter protein protein-coding 626048272 Caps calcyphosine INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); nucleoplasm (ortholog) 4 88086774 88087481 - 22301074;30032202 116898414 MODEL JAAIVD010000003;XM_032899698 XP_032755589 calcyphosin protein-coding 626048278 LOC116890539 small nucleolar RNA SNORA17 1 222170618 222170741 + 116890539 MODEL JAAIVD010000025 pseudo 626048279 LOC116897288 SNRPN upstream reading frame protein-like 3 202156813 202157025 - 116897288 MODEL JAAIVD010000012 pseudo 626048280 Mcub mitochondrial calcium uniporter dominant negative subunit beta ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); mitochondrial calcium ion homeostasis (ortholog); mitochondrial calcium ion transmembrane transport (ortholog); FOUND IN calcium channel complex (ortholog); cytosol (ortholog); membrane (ortholog) 3 29347874 29389714 + 30032202 116896260 MODEL JAAIVD010000012;XM_032897334 XP_032753225 calcium uniporter regulatory subunit MCUb, mitochondrial protein-coding 626048292 Il20rb interleukin 20 receptor subunit beta ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN CD8-positive, alpha-beta T cell homeostasis (ortholog); homeostasis of number of cells within a tissue (ortholog); immune response-inhibiting signal transduction (ortholog); ASSOCIATED WITH toxic shock syndrome (ortholog) 8 91756521 91787106 - 30032202 116908048 MODEL JAAIVD010000027;XM_032911323 XP_032767214 interleukin-20 receptor subunit beta protein-coding 626048303 Tg thyroglobulin ENCODES a protein that exhibits anion binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to genistein (ortholog); iodide transport (ortholog); regulation of myelination (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH alcoholic liver cirrhosis (ortholog); Animal Disease Models (ortholog); anxiety disorder (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 1 240782781 240963167 + 30032202 116912276 MODEL JAAIVD010000025;XM_032916270 XP_032772161 protein-coding 626048354 LOC116908544 60S ribosomal protein L5-like 9 87530326 87531461 - 116908544 MODEL JAAIVD010000002 pseudo 626048355 Cwc25 CWC25 spliceosome associated protein INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); U2-type catalytic step 1 spliceosome (ortholog) 9 56617329 56640214 + 30032202 116909570 MODEL JAAIVD010000002;XM_032913190 XP_032769081 CWC25 spliceosome associated protein homolog;pre-mRNA-splicing factor CWC25 homolog protein-coding 626048369 LOC116913046 U6 spliceosomal RNA 11 27424350 27424456 + 116913046 MODEL JAAIVD010000006;XR_004389581 snrna 626048372 Zfhx2 zinc finger homeobox 2 INVOLVED IN adult behavior (ortholog); regulation of sensory perception of pain (ortholog); ASSOCIATED WITH Marsili syndrome (ortholog); FOUND IN nucleus (ortholog) 12 69905445 69938378 + 22301074;30032202 116913501 MODEL JAAIVD010000007;XM_032917704 XP_032773595 zinc finger homeobox protein 2 protein-coding 626048386 Edem3 ER degradation enhancing alpha-mannosidase like protein 3 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN endoplasmic reticulum mannose trimming (ortholog); ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIv (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 10 31188257 31247566 + 22301074;30032202 116911777 MODEL JAAIVD010000005;XM_032915768;XM_032915770;XM_032915771 XP_032771659;XP_032771661;XP_032771662 ER degradation-enhancing alpha-mannosidase-like protein 3 protein-coding 626048414 LOC116894825 U4 spliceosomal RNA 2 103758671 103758822 + 116894825 MODEL JAAIVD010000001 pseudo 626048415 Tfrc transferrin receptor ENCODES a protein that exhibits double-stranded RNA binding (ortholog); Hsp70 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; iron uptake pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); Arenaviridae infectious disease (ortholog); autism spectrum disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); clathrin-coated pit (ortholog) 4 17409729 17430431 + 22301074;30032202 116898778 MODEL JAAIVD010000003;XM_032900116 XP_032756007 transferrin receptor protein 1 protein-coding 626048438 LOC116906397 small nucleolar RNA SNORD113/SNORD114 family 7 127250787 127250860 + 116906397 MODEL JAAIVD010000026;XR_004388665 snorna 626048441 Syngr4 synaptogyrin 4 2 153620185 153631539 + 30032202 116892120 MODEL JAAIVD010000001;XM_032893601 XP_032749492 synaptogyrin-4 protein-coding 626048450 LOC116898030 trem-like transcript 4 protein 4 81604861 81611928 - 30032202 116898030 MODEL JAAIVD010000003;XM_032899419 XP_032755310 protein-coding 626048458 LOC116885660 pentatricopeptide repeat-containing protein 1, mitochondrial 16 8132241 8148015 + 22301074;30032202 116885660 MODEL JAAIVD010000004;XM_032886964 XP_032742855 protein-coding 626048470 Arl6ip6 ARF like GTPase 6 interacting protein 6 ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); FOUND IN nuclear inner membrane (ortholog) 5 30954732 30984376 + 116901412 MODEL JAAIVD010000023;XM_032903299;XM_032903300;XM_032903301 XP_032759190;XP_032759191;XP_032759192 ADP ribosylation factor like GTPase 6 interacting protein 6;ADP-ribosylation factor-like protein 6-interacting protein 6 protein-coding 626048485 LOC116883742 keratin, type II cuticular Hb1-like 1 261586961 261593497 + 22301074;30032202 116883742 MODEL JAAIVD010000025;XM_032884976 XP_032740867 protein-coding 626048498 LOC116899874 small nucleolar RNA SNORA17 4 152596818 152596938 - 116899874 MODEL JAAIVD010000003 pseudo 626048499 Hdc histidine decarboxylase ENCODES a protein that exhibits amino acid binding (ortholog); histidine decarboxylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN histamine biosynthetic process (ortholog); histamine metabolic process (ortholog); L-histidine catabolic process (ortholog); PARTICIPATES IN histidine metabolic pathway; histidinemia pathway; ASSOCIATED WITH asthma (ortholog); Chlamydophila Infections (ortholog); Gilles de la Tourette syndrome (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 5 105431093 105465527 - 22301074;30032202 116900970 MODEL JAAIVD010000023;XM_032902599 XP_032758490 protein-coding 626048517 Garin4 golgi associated RAB2 interactor family member 4 INVOLVED IN cell morphogenesis (ortholog); Golgi organization (ortholog); penetration of zona pellucida (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); sperm head (ortholog) 10 69241186 69243356 - 30032202 116911747 MODEL JAAIVD010000005;XM_032915739 XP_032771630 Fam71a family with sequence similarity 71 member A;protein FAM71A protein-coding 626048522 LOC116897917 uncharacterized protein NKAPD1-like 4 40966358 40967925 - 116897917 MODEL JAAIVD010000003 pseudo 626048523 LOC116898300 non-receptor tyrosine-protein kinase TNK1-like 4 27715039 27716885 - 116898300 MODEL JAAIVD010000003 pseudo 626048524 Nphs2 NPHS2 stomatin family member, podocin INVOLVED IN actin cytoskeleton organization (ortholog); gene expression (ortholog); metanephric podocyte development (ortholog); ASSOCIATED WITH Albuminuria (ortholog); chronic kidney disease (ortholog); familial nephrotic syndrome (ortholog); FOUND IN cell periphery (ortholog); cell-cell junction (ortholog); cytoplasmic side of plasma membrane (ortholog) 10 35682238 35694708 + 30032202 116911361 MODEL JAAIVD010000005;XM_032915285;XM_032915286 XP_032771176;XP_032771177 podocin protein-coding 626048539 Tbx1 T-box transcription factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN ameloblast differentiation (ortholog); angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); acute kidney failure (ortholog); acute myocardial infarction (ortholog); FOUND IN nucleus (ortholog) 4 3832547 3839102 - 22301074;30032202 116897786 MODEL JAAIVD010000003;XM_032899208 XP_032755099 T-box transcription factor TBX1 protein-coding 626048550 Slc5a12 solute carrier family 5 member 12 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); FOUND IN apical plasma membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 5 88873673 88923945 + 22301074;30032202 116901731 MODEL JAAIVD010000023;XM_032903870 XP_032759761 sodium-coupled monocarboxylate transporter 2 protein-coding 626048569 Slamf9 SLAM family member 9 INVOLVED IN defense response to bacterium (ortholog); plasmacytoid dendritic cell chemotaxis (ortholog); plasmacytoid dendritic cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog) 10 51593720 51596491 + 30032202 116911323 MODEL JAAIVD010000005;XM_032915241 XP_032771132 protein-coding 626048577 LOC116883321 uncharacterized LOC116883321 1 260415136 260416081 - 116883321 MODEL JAAIVD010000025;XR_004385745 ncrna 626048581 Tmem14c transmembrane protein 14C ENCODES a protein that exhibits transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme biosynthetic process (ortholog); mitochondrial transport (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 60013952 60020116 + 30032202 116883702 MODEL JAAIVD010000009;XM_032884915;XM_032884916 XP_032740806;XP_032740807 protein-coding 626048594 Depdc7 DEP domain containing 7 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 5 82627519 82648222 - 22301074 116901706 MODEL JAAIVD010000023;XM_032903835;XM_032903836 XP_032759726;XP_032759727 DEP domain-containing protein 7 protein-coding 626048611 LOC116890089 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A 1 227482519 227484405 - 116890089 MODEL JAAIVD010000025 pseudo 626048612 Col6a1 collagen type VI alpha 1 chain ENCODES a protein that exhibits collagen binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); adipose tissue development (ortholog); apoptotic nuclear changes (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Bethlem myopathy (ortholog); Bethlem Myopathy 1A (ortholog); diastolic heart failure (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 18 44672 62694 - 116887206 MODEL JAAIVD010000013;XM_032888763 XP_032744654 collagen alpha-1(VI) chain protein-coding 626048651 Rorc RAR related orphan receptor C ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adipose tissue development (ortholog); alpha-beta T cell differentiation (ortholog); cell differentiation (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); Animal Toxoplasmosis (ortholog); bacterial pneumonia (ortholog); FOUND IN external side of plasma membrane (ortholog); nuclear body (ortholog); nucleus (ortholog) 3 62777762 62803441 - 22301074;30032202 116896590 MODEL JAAIVD010000012;XM_032897831;XM_032897832 XP_032753722;XP_032753723 nuclear receptor ROR-gamma protein-coding 626048667 Fam114a1 family with sequence similarity 114 member A1 INVOLVED IN angiotensin-activated signaling pathway (ortholog); connective tissue replacement (ortholog); fibroblast activation (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 11 21979060 22050637 + 116912460 MODEL JAAIVD010000006;XM_032916526 XP_032772417 protein NOXP20 protein-coding 626048685 Fiz1 FLT3 interacting zinc finger 1 ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 2 177584007 177590979 - 116892680 MODEL JAAIVD010000001;XM_032894521 XP_032750412 flt3-interacting zinc finger protein 1 protein-coding 626048692 Fbxo10 F-box protein 10 INVOLVED IN regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 1 1420328 1464606 + 22301074;30032202 116890818 MODEL JAAIVD010000025;XM_032891319;XM_032891329;XM_032891338 XP_032747210;XP_032747220;XP_032747229 F-box only protein 10 protein-coding 626048713 Igsf21 immunoglobin superfamily member 21 INVOLVED IN synapse maturation (ortholog); trans-synaptic signaling, modulating synaptic transmission (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN external side of plasma membrane (ortholog); inhibitory synapse (ortholog); postsynaptic density membrane (ortholog) 1 17923997 18149520 + 30032202 116893608 MODEL JAAIVD010000025;XM_032895319;XM_032895328 XP_032751210;XP_032751219 immunoglobulin superfamily member 21 protein-coding 626048732 LOC116883905 60S ribosomal protein L6-like 14 68519435 68522322 + 116883905 MODEL JAAIVD010000009 pseudo 626048733 Lin54 lin-54 DREAM MuvB core complex component ENCODES a protein that exhibits minor groove of adenine-thymine-rich DNA binding (ortholog); transcription regulatory region nucleic acid binding (ortholog); INVOLVED IN nucleosome organization (ortholog); FOUND IN RNA polymerase II transcription repressor complex (ortholog) 11 10663432 10720064 - 30032202 116912266 MODEL JAAIVD010000006;XM_032916254 XP_032772145 protein lin-54 homolog protein-coding 626048750 LOC116898564 component of Sp100-rs-like 4 157778395 157786772 + 22301074;30032202 116898564 MODEL JAAIVD010000003;XM_032899771 XP_032755662 protein-coding 626048756 Nup88 nucleoporin 88 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH fetal akinesia deformation sequence syndrome 4 (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN nuclear envelope (ortholog); nuclear pore (ortholog); nucleoplasm (ortholog) 9 50569903 50594205 - 30032202 116909025 MODEL JAAIVD010000002;XM_032912503 XP_032768394 nuclear pore complex protein Nup88 protein-coding 626048777 LOC116889909 olfactory receptor 6C2-like 1 160313303 160314256 - 22301074;30032202 116889909 MODEL JAAIVD010000025;XM_032890729 XP_032746620 protein-coding 626048780 LOC116898547 60S ribosomal protein L11-like 4 151768359 151770023 - 116898547 MODEL JAAIVD010000003 pseudo 626048781 Wipi1 WD repeat domain, phosphoinositide interacting 1 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN autophagosome membrane (ortholog); cytoplasm (ortholog); endosome membrane (ortholog) 9 69537035 69573256 + 22301074;30032202 116909130 MODEL JAAIVD010000002;XM_032912612 XP_032768503 WD repeat domain phosphoinositide-interacting protein 1 protein-coding 626048798 LOC116904799 U4 spliceosomal RNA 6 38320654 38320845 + 116904799 MODEL JAAIVD010000024 pseudo 626048799 Adad2 adenosine deaminase domain containing 2 INVOLVED IN spermatid development (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 39254893 39259075 + 22301074;30032202 116886326 MODEL JAAIVD010000011;XM_032887774 XP_032743665 adenosine deaminase domain-containing protein 2 protein-coding 626048812 Ebi3 Epstein-Barr virus induced 3 ENCODES a protein that exhibits cytokine receptor activity (ortholog); interleukin-27 receptor binding (ortholog); INVOLVED IN T cell proliferation (ortholog); PARTICIPATES IN interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); pre-eclampsia (ortholog) 4 87345639 87349395 + 22301074;30032202 116899158 MODEL JAAIVD010000003;XM_032900717 XP_032756608 interleukin-27 subunit beta protein-coding 626048821 Fmnl3 formin like 3 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell migration (ortholog); cytoskeleton organization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 1 272121243 272172722 - 22301074;30032202 116885001 MODEL JAAIVD010000025;XM_032886234;XM_032886243 XP_032742125;XP_032742134 formin-like protein 3 protein-coding 626048854 LOC116885033 small nucleolar RNA SNORA48 15 66016137 66016279 - 116885033 MODEL JAAIVD010000010;XR_004385920 snorna 626048857 Tmem275 transmembrane protein 275 1 39571916 39579457 + 116887377 MODEL JAAIVD010000025;XM_032888975 XP_032744866 protein-coding 626048862 Aamp angio associated migratory cell protein ENCODES a protein that exhibits heparin binding (ortholog); INVOLVED IN smooth muscle cell migration (ortholog); FOUND IN cell surface (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 4 147731807 147737593 - 22301074;30032202 116899495 MODEL JAAIVD010000003;XM_032901330;XM_032901331 XP_032757221;XP_032757222 angio-associated migratory cell protein protein-coding 626048881 LOC116893885 40S ribosomal protein S2-like 2 73479882 73480744 - 116893885 MODEL JAAIVD010000001 pseudo 626048882 Gtf2a1 general transcription factor IIA subunit 1 ENCODES a protein that exhibits DNA binding (ortholog); protein heterodimerization activity (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Dandy-Walker syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 7 104695574 104728050 - 22301074;30032202 116905333 MODEL JAAIVD010000026;XM_032908229 XP_032764120 transcription initiation factor IIA subunit 1 protein-coding 626048895 LOC116910269 60S ribosomal protein L10-like 9 35801285 35802990 - 22301074;30032202 116910269 MODEL JAAIVD010000002;XM_032914151 XP_032770042 protein-coding 626048900 Ntmt1 N-terminal Xaa-Pro-Lys N-methyltransferase 1 ENCODES a protein that exhibits histone methyltransferase activity (ortholog); N-terminal protein N-methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); N-terminal peptidyl-alanine trimethylation (ortholog); N-terminal peptidyl-glycine methylation (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 4798040 4814426 - 30032202 116901175 MODEL JAAIVD010000023;XM_032902836;XM_032902837;XM_032902838;XM_032902839;XM_032902840;XM_032902841;XM_032902843;XM_032902844 XP_032758727;XP_032758728;XP_032758729;XP_032758730;XP_032758731;XP_032758732;XP_032758734;XP_032758735 protein-coding 626048931 LOC116898360 alpha-enolase-like 4 56522092 56529590 + 22301074;30032202 116898360 MODEL JAAIVD010000003;XM_032899676 XP_032755567 protein-coding 626048936 LOC116895309 ribosome biogenesis protein NSA2 homolog 3 23293301 23293957 + 116895309 MODEL JAAIVD010000012 pseudo 626048937 Prkch protein kinase C eta ENCODES a protein that exhibits diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); negative regulation of glial cell apoptotic process (ortholog); negative regulation of translation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH cerebral infarction (ortholog); obesity (ortholog); substance-related disorder (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 87828240 88027177 + 22301074 116905164 MODEL JAAIVD010000026;XM_032907939 XP_032763830 protein kinase C eta type protein-coding 626048955 Kif15 kinesin family member 15 ASSOCIATED WITH Braddock-Carey Syndrome 2 (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog) 8 114087494 114159464 + 22301074 116908013 MODEL JAAIVD010000027;XM_032911271 XP_032767162 kinesin-like protein KIF15 protein-coding 626048994 Fbxo11 F-box protein 11 ENCODES a protein that exhibits protein-arginine N-methyltransferase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); negative regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH breast carcinoma (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 7 4936057 5011008 + 22301074;30032202 116905743 MODEL JAAIVD010000026;XM_032908710;XM_032908711 XP_032764601;XP_032764602 F-box only protein 11 protein-coding 626049025 Tsr3 TSR3 ribosome maturation factor ENCODES a protein that exhibits rRNA small subunit aminocarboxypropyltransferase activity (ortholog); transferase activity (ortholog); INVOLVED IN enzyme-directed rRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog) 9 2506446 2508793 + 22301074;30032202 116910554 MODEL JAAIVD010000002;XM_032914463 XP_032770354 ribosome biogenesis protein TSR3 homolog protein-coding 626049035 C4a complement C4A (Chido/Rodgers blood group) ENCODES a protein that exhibits antigen binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); PARTICIPATES IN classical complement pathway; ASSOCIATED WITH complement component 4A deficiency (ortholog); genetic disease (ortholog); Graves' disease (ortholog); FOUND IN axon (ortholog); classical-complement-pathway C3/C5 convertase complex (ortholog); dendrite (ortholog) 18 7405116 7419413 - 22301074;30032202 116886838 MODEL JAAIVD010000013;XM_032888286 XP_032744177 complement C4-A;complement C4A (Rodgers blood group) protein-coding 626049080 Clvs1 clavesin 1 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) 1 134073745 134260501 - 30032202 116903484 MODEL JAAIVD010000025;XM_032906063 XP_032761954 clavesin-1 protein-coding 626049090 Pdcd5 programmed cell death 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); heparin binding (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); negative regulation of protein folding (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN nucleus (ortholog) 2 163018465 163023842 + 22301074;30032202 116892261 MODEL JAAIVD010000001;XM_032893848 XP_032749739 programmed cell death protein 5 protein-coding 626049100 LOC116899089 translation initiation factor IF-2-like 1 46074658 46078101 - 116899089 MODEL JAAIVD010000025;XM_032900595 XP_032756486 protein-coding 626049107 Klc2 kinesin light chain 2 ENCODES a protein that exhibits kinesin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); lysosome localization (ortholog); ASSOCIATED WITH nonsyndromic deafness (ortholog); SPOAN syndrome (ortholog); FOUND IN ciliary rootlet (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 2533647 2543852 + 22301074;30032202 116890732 MODEL JAAIVD010000001;XM_032891188;XM_032891189;XM_032891190 XP_032747079;XP_032747080;XP_032747081 protein-coding 626049133 Kpna3 karyopherin subunit alpha 3 ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 88 (ortholog); FOUND IN cytosol (ortholog); NLS-dependent protein nuclear import complex (ortholog); nucleoplasm (ortholog) 12 62980348 63049058 + 22301074;30032202 116914045 MODEL JAAIVD010000007;XM_032918324;XM_032918325 XP_032774215;XP_032774216 importin subunit alpha-4 protein-coding 626049156 LOC116891342 PRAME family member 8-like 1 52673525 52676669 - 22301074;30032202 116891342 MODEL JAAIVD010000025;XM_032892365 XP_032748256 protein-coding 626049161 Mgst3 microsomal glutathione S-transferase 3 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN leukotriene biosynthetic process (ortholog); lipid metabolic process (ortholog); prostanoid metabolic process (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); FOUND IN membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 10 46693440 46713504 - 22301074;30032202 116911225 MODEL JAAIVD010000005;XM_032915123 XP_032771014 protein-coding 626049171 LOC116909168 60S ribosomal protein L12-like 9 90378111 90378639 - 116909168 MODEL JAAIVD010000002;XR_004389053 pseudo 626049174 LOC116911679 cell division cycle-associated protein 4-like 10 38245253 38245957 + 116911679 MODEL JAAIVD010000005 pseudo 626049175 LOC116893841 heterogeneous nuclear ribonucleoprotein A3-like 2 58590351 58591349 - 116893841 MODEL JAAIVD010000001 pseudo 626049176 Il1b interleukin 1 beta ENCODES a protein that exhibits cytokine activity (ortholog); integrin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN astrocyte activation (ortholog); cellular response to antibiotic (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); secretory granule (ortholog) 5 108109213 108115688 - 22301074;30032202 116900626 MODEL JAAIVD010000023;XM_032902343 XP_032758234 interleukin-1 beta protein-coding 626049187 LOC116894043 putative olfactory receptor 52P1 2 102528357 102529304 - 22301074 116894043 MODEL JAAIVD010000001;XM_032895763 XP_032751654 protein-coding 626049190 Npl N-acetylneuraminate pyruvate lyase ENCODES a protein that exhibits identical protein binding (ortholog); N-acetylneuraminate lyase activity (ortholog); INVOLVED IN N-acetylneuraminate catabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH cholestasis (ortholog) 10 32960147 32999698 - 30032202 116911486 MODEL JAAIVD010000005;XM_032915467 XP_032771358 N-acetylneuraminate lyase protein-coding 626049206 LOC116885501 aldo-keto reductase family 1 member B1-like 1 118818630 118824616 - 116885501 MODEL JAAIVD010000025 pseudo 626049207 Cript CXXC repeat containing interactor of PDZ3 domain ENCODES a protein that exhibits microtubule binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); protein localization to microtubule (ortholog); regulation of postsynaptic density assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); isolated growth hormone deficiency type IA (ortholog); SHORT STATURE WITH MICROCEPHALY AND DISTINCTIVE FACIES (ortholog); FOUND IN dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 7 5953126 5961389 - 30032202 116905757 MODEL JAAIVD010000026;XM_032908728 XP_032764619 cysteine-rich PDZ-binding protein protein-coding 626049216 LOC116889954 olfactory receptor 6C3-like 1 161692866 161693804 + 22301074;30032202 116889954 MODEL JAAIVD010000025;XM_032890757 XP_032746648 protein-coding 626049219 LOC116887905 germ cell-less protein-like 1 X 53407906 53409456 + 22301074;30032202 116887905 MODEL JAAIVD010000014;XM_032889379 XP_032745270 protein-coding 626049222 LOC116896603 uncharacterized LOC116896603 3 63106501 63112086 - 116896603 MODEL JAAIVD010000012;XR_004387346 ncrna 626049226 LOC116890225 60S ribosomal protein L3-like 1 269000744 269001980 + 22301074;30032202 116890225 MODEL JAAIVD010000025;XM_032890959 XP_032746850 protein-coding 626049231 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60830090 60830161 + 116897664 MODEL JAAIVD010000012 trna 626049232 Lsr lipolysis stimulated lipoprotein receptor INVOLVED IN epithelial structure maintenance (ortholog); establishment of blood-brain barrier (ortholog); establishment of skin barrier (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog); tight junction (ortholog) 2 165066323 165082084 + 30032202 116892294 MODEL JAAIVD010000001;XM_032893902;XM_032893903;XM_032893904 XP_032749793;XP_032749794;XP_032749795 lipolysis-stimulated lipoprotein receptor protein-coding 626049250 LOC116902955 vomeronasal type-1 receptor 102-like 6 124250839 124258505 + 22301074;30032202 116902955 MODEL JAAIVD010000024;XM_032905280 XP_032761171 protein-coding 626049257 LOC116889594 uncharacterized LOC116889594 Y 1886482 1888507 + 116889594 MODEL JAAIVD010000015;XR_004386501 ncrna 626049262 Fxyd7 FXYD domain containing ion transport regulator 7 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN regulation of monoatomic ion transport (ortholog); FOUND IN plasma membrane (ortholog) 2 164979716 164989315 + 22301074;30032202 116892292 MODEL JAAIVD010000001;XM_032893899;XM_032893900 XP_032749790;XP_032749791 FXYD domain-containing ion transport regulator 7 protein-coding 626049276 Bri3bp BRI3 binding protein FOUND IN mitochondrion (ortholog) 16 28460214 28472087 - 30032202 116885321 MODEL JAAIVD010000004;XM_032886585 XP_032742476 BRI3-binding protein protein-coding 626049283 LOC116906504 U2 spliceosomal RNA 7 49992341 49992490 + 116906504 MODEL JAAIVD010000026 pseudo 626049284 Plac8 placenta associated 8 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); defense response to bacterium (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Chlamydiaceae Infections (ortholog); Escherichia Coli Infections (ortholog); Experimental Liver Cirrhosis (ortholog) 11 10775316 10796634 - 30032202 116912440 MODEL JAAIVD010000006;XM_032916509;XM_032916510 XP_032772400;XP_032772401 placenta-specific gene 8 protein protein-coding 626049297 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42287993 42288065 + 116884228 MODEL JAAIVD010000009 trna 626049298 LOC116891319 uncharacterized LOC116891319 2 57167691 57181983 + 116891319 MODEL JAAIVD010000001;XR_004386828 ncrna 626049303 Il33 interleukin 33 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-33 receptor binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to mechanical stimulus (ortholog); defense response to virus (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); Alzheimer's disease (ortholog); angiostrongyliasis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 2 30026588 30065067 + 22301074;30032202 116891080 MODEL JAAIVD010000001;XM_032891791;XM_032891792;XM_032891793 XP_032747682;XP_032747683;XP_032747684 interleukin-33 protein-coding 626049324 LOC116903032 putative vomeronasal receptor-like protein 4 6 159248497 159249405 - 22301074;30032202 116903032 MODEL JAAIVD010000024;XM_032905337 XP_032761228 protein-coding 626049327 LOC116910402 uncharacterized LOC116910402 9 90003214 90003802 - 116910402 MODEL JAAIVD010000002;XR_004389146 ncrna 626049331 Ncapg non-SMC condensin I complex subunit G INVOLVED IN mitotic chromosome condensation (ortholog); positive regulation of chromosome condensation (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); Endometrial Neoplasms (ortholog); FOUND IN condensed chromosome (ortholog); condensed chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog) 11 60176031 60208007 - 30032202 116912232 MODEL JAAIVD010000006;XM_032916207 XP_032772098 condensin complex subunit 3 protein-coding 626049356 Mcidas multiciliate differentiation and DNA synthesis associated cell cycle protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); motile cilium assembly (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 3 (ortholog); FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 183784472 183789621 - 30032202 116895652 MODEL JAAIVD010000012;XM_032896858 XP_032752749 multicilin protein-coding 626049365 LOC116893810 40S ribosomal protein S15a-like 2 44828314 44828754 - 22301074;30032202 116893810 MODEL JAAIVD010000001;XM_032895521 XP_032751412 protein-coding 626049370 Adra1d adrenoceptor alpha 1D ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure (ortholog); neuron-glial cell signaling (ortholog); norepinephrine-epinephrine vasoconstriction involved in regulation of systemic arterial blood pressure (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH diastolic heart failure (ortholog); polycystic ovary syndrome (ortholog) 5 111285999 111303047 - 22301074;30032202 116901994 MODEL JAAIVD010000023;XM_032904253 XP_032760144 alpha-1D adrenergic receptor protein-coding 626049376 LOC116884681 uncharacterized LOC116884681 15 36648130 36660676 - 116884681 MODEL JAAIVD010000010;XR_004385888 ncrna 626049380 Ppt2 palmitoyl-protein thioesterase 2 ENCODES a protein that exhibits fatty acyl-CoA hydrolase activity (ortholog); palmitoyl hydrolase activity (ortholog); thiolester hydrolase activity (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis (ortholog) 18 7299023 7309863 - 22301074;30032202 116886832 MODEL JAAIVD010000013;XM_032888271;XM_032888272;XM_032888273;XM_032888275;XM_032888276;XM_032888277;XM_032888278 XP_032744162;XP_032744163;XP_032744164;XP_032744166;XP_032744167;XP_032744168;XP_032744169 lysosomal thioesterase PPT2 protein-coding 626049411 Cxcl6 C-X-C motif chemokine ligand 6 ENCODES a protein that exhibits chemokine activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); antibacterial innate immune response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Alcoholic Liver Diseases (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog) 11 4198515 4199521 + 22301074;30032202 116912700 MODEL JAAIVD010000006;XM_032916829 XP_032772720 C-X-C motif chemokine 6 protein-coding 626049418 Npr1 natriuretic peptide receptor 1 ENCODES a protein that exhibits guanylate cyclase activity (ortholog); hormone binding (ortholog); natriuretic peptide receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); cGMP biosynthetic process (ortholog); cGMP-mediated signaling (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; brain natriuretic peptide signaling pathway; ASSOCIATED WITH Aortic Rupture (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN ANPR-A receptor complex (ortholog); receptor complex (ortholog) 3 63151845 63166826 + 22301074;30032202 116896606 MODEL JAAIVD010000012;XM_032897857 XP_032753748 atrial natriuretic peptide receptor 1 protein-coding 626049444 Tbx20 T-box transcription factor 20 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN aortic valve development (ortholog); aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); aortic valve disease 1 (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 20687900 20739940 - 22301074;30032202 116907496 MODEL JAAIVD010000027;XM_032910489 XP_032766380 T-box transcription factor TBX20 protein-coding 626049454 LOC116896649 uncharacterized LOC116896649 3 64324640 64332557 - 116896649 MODEL JAAIVD010000012;XR_004387352 ncrna 626049458 LOC116903311 RNA-binding protein 12B-A 1 131437473 131444247 - 22301074;30032202 116903311 MODEL JAAIVD010000025;XM_032905745;XM_032905753;XM_032905762;XM_032905771 XP_032761636;XP_032761644;XP_032761653;XP_032761662 protein-coding 626049474 Mrtfa myocardin related transcription factor A ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); Alzheimer's disease (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 1 250766542 250939413 - 30032202 116913900 MODEL JAAIVD010000025;XM_032918182;XM_032918186 XP_032774073;XP_032774077 myocardin-related transcription factor A protein-coding 626049495 Thrsp thyroid hormone responsive ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN regulation of lipid biosynthetic process (ortholog); regulation of triglyceride biosynthetic process (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); attention deficit hyperactivity disorder (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 95730845 95735297 - 30032202 116891696 MODEL JAAIVD010000001;XM_032892963 XP_032748854 thyroid hormone-inducible hepatic protein protein-coding 626049501 Maf1 MAF1 homolog, negative regulator of RNA polymerase III ENCODES a protein that exhibits GABA receptor binding (ortholog); RNA polymerase III type 1 promoter sequence-specific DNA binding (ortholog); RNA polymerase III type 2 promoter sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase I (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 248686028 248689103 + 22301074;30032202 116913116 MODEL JAAIVD010000025;XM_032917274;XM_032917281;XM_032917290;XM_032917299 XP_032773165;XP_032773172;XP_032773181;XP_032773190 repressor of RNA polymerase III transcription MAF1 homolog protein-coding 626049520 LOC116890347 U6 spliceosomal RNA 1 54113089 54113189 - 116890347 MODEL JAAIVD010000025 pseudo 626049521 Slc30a9 solute carrier family 30 member 9 ENCODES a protein that exhibits chromatin binding (ortholog); nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of mitochondrion organization (ortholog); ASSOCIATED WITH Birk-Landau-Perez Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytoskeleton (ortholog); endoplasmic reticulum (ortholog) 11 24418170 24470590 + 22301074;30032202 116912904 MODEL JAAIVD010000006;XM_032917161;XM_032917162;XM_032917163 XP_032773052;XP_032773053;XP_032773054 zinc transporter 9 protein-coding 626049548 LOC116911768 ornithine decarboxylase-like 10 32779089 32781251 - 116911768 MODEL JAAIVD010000005 pseudo 626049549 Aff2 ALF transcription elongation factor 2 ENCODES a protein that exhibits G-quadruplex RNA binding (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); nuclear speck organization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); fragile X syndrome (ortholog); genetic disease (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) X 127089841 127141325 + 22301074;30032202 116888208 MODEL JAAIVD010000014;XM_032889505 XP_032745396 AF4/FMR2 family member 2 protein-coding 626049564 LOC116895582 39S ribosomal protein L1, mitochondrial-like 3 141934795 141935591 + 116895582 MODEL JAAIVD010000012 pseudo 626049565 Prlhr prolactin releasing hormone receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); hormone metabolic process (ortholog); PARTICIPATES IN obesity pathway; ASSOCIATED WITH hypertension (ortholog); obesity (ortholog); FOUND IN cilium (ortholog) 2 55686413 55687825 + 22301074;30032202 116893830 MODEL JAAIVD010000001;XM_032895548 XP_032751439 prolactin-releasing peptide receptor protein-coding 626049571 Shb SH2 domain containing adaptor protein B ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN B cell proliferation (ortholog); blood vessel development (ortholog); blood vessel morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; vascular endothelial growth factor signaling pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 979999 1088523 + 30032202 116890754 MODEL JAAIVD010000025;XM_032891214 XP_032747105 SH2 domain-containing adapter protein B protein-coding 626049581 LOC116900808 uncharacterized LOC116900808 5 28332775 28537026 + 116900808 MODEL JAAIVD010000023 pseudo 626049582 LOC116914186 U6 spliceosomal RNA 12 20229591 20229696 - 116914186 MODEL JAAIVD010000007;XR_004389726 snrna 626049585 Pnldc1 PARN like ribonuclease domain containing exonuclease 1 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN blastocyst formation (ortholog); nuclear-transcribed mRNA poly(A) tail shortening (ortholog); piRNA processing (ortholog); ASSOCIATED WITH male infertility (ortholog); oligospermia (ortholog); spermatogenic failure 3 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 191619433 191639140 - 30032202 116892833 MODEL JAAIVD010000001;XM_032894721 XP_032750612 PARN like, ribonuclease domain containing 1;poly(A)-specific ribonuclease PNLDC1 protein-coding 626049608 Gas6 growth arrest specific 6 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); phosphatidylserine binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH acute kidney failure (ortholog); adenoid cystic carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 13 70211532 70242157 + 22301074 116914433 MODEL JAAIVD010000008;XM_032918731 XP_032774622 growth arrest-specific protein 6 protein-coding 626049627 LOC116896063 dynein light chain 1, cytoplasmic-like 3 205462205 205467766 + 116896063 MODEL JAAIVD010000012 pseudo 626049628 Il24 interleukin 24 INVOLVED IN cellular response to interleukin-4 (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of cell migration (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Lung Neoplasms (ortholog); pancreatic cancer (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 10 4918568 4924083 + 116911432 MODEL JAAIVD010000005;XM_032915402 XP_032771293 interleukin-24 protein-coding 626049638 Isg15 ISG15 ubiquitin like modifier ENCODES a protein that exhibits integrin binding (ortholog); protein tag activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); defense response to virus (ortholog); innate immune response (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); Chronic Hepatitis C (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog) 1 4467767 4469156 + 22301074;30032202 116891766 MODEL JAAIVD010000025;XM_032893092 XP_032748983 ubiquitin-like protein ISG15 protein-coding 626049644 Nalcn sodium leak channel, non-selective ENCODES a protein that exhibits leak channel activity (ortholog); monoatomic cation channel activity (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); regulation of resting membrane potential (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); congenital limbs-face contractures-hypotonia-developmental delay syndrome (ortholog); Developmental Disease (ortholog); FOUND IN plasma membrane (ortholog) 12 1297303 1614344 + 22301074;30032202 116913081 MODEL JAAIVD010000007;XM_032917213 XP_032773104 sodium leak channel non-selective protein protein-coding 626049692 LOC116898316 EEF1A lysine methyltransferase 4-like 4 38673831 38674996 - 116898316 MODEL JAAIVD010000003 pseudo 626049693 LOC116892919 programmed cell death protein 6-like 2 203738702 203744735 - 22301074 116892919 MODEL JAAIVD010000001;XM_032894845 XP_032750736 protein-coding 626049700 LOC116894079 olfactory receptor 52D1-like 2 103114907 103115892 + 116894079 MODEL JAAIVD010000001 pseudo 626049701 LOC116906877 cytochrome P450 4F4 1 157123538 157140063 + 22301074 116906877 MODEL JAAIVD010000025;XM_032909792 XP_032765683 protein-coding 626049718 Slc25a22 solute carrier family 25 member 22 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); L-glutamate transmembrane transporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); regulation of insulin secretion (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 3 (ortholog); early myoclonic encephalopathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 8048277 8056132 + 30032202 116890870 MODEL JAAIVD010000001;XM_032891447;XM_032891448;XM_032891449;XM_032891450;XM_032891451 XP_032747338;XP_032747339;XP_032747340;XP_032747341;XP_032747342 mitochondrial glutamate carrier 1 protein-coding 626049744 LOC116910644 U6 spliceosomal RNA 9 93049209 93049267 - 116910644 MODEL JAAIVD010000002 pseudo 626049745 Cdc42bpb CDC42 binding protein kinase beta ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); CHILTON-OKUR-CHUNG NEURODEVELOPMENTAL SYNDROME (ortholog); genetic disease (ortholog); FOUND IN actomyosin (ortholog) 7 128871732 128955530 - 22301074;30032202 116905487 MODEL JAAIVD010000026;XM_032908486 XP_032764377 serine/threonine-protein kinase MRCK beta protein-coding 626049786 Nfe2l2 NFE2 like bZIP transcription factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN aflatoxin catabolic process (ortholog); cell redox homeostasis (ortholog); cellular response to angiotensin (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; oxidative stress response pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); ciliary basal body (ortholog) 5 53028461 53055624 - 30032202 116901536 MODEL JAAIVD010000023;XM_032903519;XM_032903520 XP_032759410;XP_032759411 nuclear factor erythroid 2-related factor 2;nuclear factor, erythroid 2 like 2 protein-coding 626049799 Myof myoferlin ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cellular response to heat (ortholog); glycerol metabolic process (ortholog); muscle cell development (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); Hereditary Angioedema 7 (ortholog); FOUND IN caveola (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 2 35714346 35866072 + 22301074;30032202 116891126 MODEL JAAIVD010000001;XM_032891850 XP_032747741 protein-coding 626049857 Stk32b serine/threonine kinase 32B ASSOCIATED WITH long QT syndrome (ortholog) 11 67469664 67707665 + 22301074;30032202 116912505 MODEL JAAIVD010000006;XM_032916591 XP_032772482 serine/threonine-protein kinase 32B protein-coding 626049873 LOC116892307 cytochrome c oxidase subunit 6B1 INVOLVED IN substantia nigra development (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 165379485 165388137 + 22301074;30032202 116892307 MODEL JAAIVD010000001;XM_032893925 XP_032749816 protein-coding 626049881 LOC116900357 60S ribosomal protein L32-like 1 115452755 115456758 - 116900357 MODEL JAAIVD010000025 pseudo 626049882 LOC116895397 high mobility group protein B2-like 1 78542647 78543161 + 116895397 MODEL JAAIVD010000025 pseudo 626049883 Kiaa0753 KIAA0753 ortholog INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); genetic disease (ortholog); Joubert Syndrome 38 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 43307220 43350460 + 22301074;30032202 116910234 MODEL JAAIVD010000002;XM_032914125 XP_032770016 protein moonraker protein-coding 626049905 LOC116897438 U6 spliceosomal RNA 3 47957581 47957681 + 116897438 MODEL JAAIVD010000012 pseudo 626049906 LOC116897379 U1 spliceosomal RNA 3 72100837 72101000 - 116897379 MODEL JAAIVD010000012;XR_004387426 snrna 626049909 Zbtb47 zinc finger and BTB domain containing 47 ASSOCIATED WITH epilepsy (ortholog) 8 112919397 112930633 + 22301074;30032202 116907977 MODEL JAAIVD010000027;XM_032911217;XM_032911218;XM_032911219;XR_004388864 XP_032767108;XP_032767109;XP_032767110 zinc finger and BTB domain-containing protein 47 protein-coding 626049928 LOC116908332 U6 spliceosomal RNA 8 38472095 38472198 - 116908332 MODEL JAAIVD010000027;XR_004388887 snrna 626049931 Slf2 SMC5/6 complex localization factor 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of double-strand break repair (ortholog); positive regulation of maintenance of mitotic sister chromatid cohesion (ortholog); ASSOCIATED WITH genetic disease (ortholog); Mosaic Variegated Aneuploidy Syndrome 5 (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 44430388 44490605 + 30032202 116891215 MODEL JAAIVD010000001;XM_032892049 XP_032747940 SMC5-SMC6 complex localization factor 2;SMC5-SMC6 complex localization factor protein 2 protein-coding 626049955 LOC116897753 60S ribosomal protein L12-like 4 5567178 5576959 - 22301074;30032202 116897753 MODEL JAAIVD010000003;XM_032899186 XP_032755077 protein-coding 626049959 Tfeb transcription factor EB ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); cellular response to amino acid starvation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 4 82084476 82140295 - 22301074;30032202 116899072 MODEL JAAIVD010000003;XM_032900561;XM_032900562 XP_032756452;XP_032756453 protein-coding 626049975 Nos1 nitric oxide synthase 1 ENCODES a protein that exhibits ATPase binding (ortholog); cadmium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to epinephrine stimulus (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH achalasia (ortholog); acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN azurophil granule (ortholog); calyx of Held (ortholog); caveola (ortholog) 16 35872056 35983185 - 1712077;22301074;30032202 116885579 MODEL JAAIVD010000004;X59949;XM_032886874 CAA42574;XP_032742765 bNOS nitric oxidase synthase;nitric oxide synthase, brain protein-coding 626050009 LOC116894940 small nucleolar RNA SNORD115 2 140303376 140303452 - 116894940 MODEL JAAIVD010000001;XR_004387138 snorna 626050012 Tfec transcription factor EC ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 122078479 122143840 + 22301074;30032202 116902943 MODEL JAAIVD010000024;XM_032905269;XM_032905270 XP_032761160;XP_032761161 protein-coding 626050026 LOC116914632 phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2-like 13 64065389 64157200 - 22301074;30032202 116914632 MODEL JAAIVD010000008;XM_032919023 XP_032774914 protein-coding 626050056 Cpe carboxypeptidase E ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cell adhesion molecule binding (ortholog); cobalt ion binding (ortholog); INVOLVED IN cardiac left ventricle morphogenesis (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH alcohol dependence (ortholog); atherosclerosis (ortholog); BDV Syndrome (ortholog); FOUND IN dendrite (ortholog); dense core granule (ortholog); extracellular region (ortholog) 13 24433549 24535005 + 22301074 116914874 MODEL JAAIVD010000008;XM_032919317 XP_032775208 protein-coding 626050069 LOC116908405 small nucleolar RNA SNORA17 8 84191821 84191951 - 116908405 MODEL JAAIVD010000027;XR_004388948 snorna 626050072 LOC116908957 asialoglycoprotein receptor 1 9 49660195 49663876 + 30032202 116908957 MODEL JAAIVD010000002;XM_032912417 XP_032768308 protein-coding 626050085 Slc18a2 solute carrier family 18 member A2 ENCODES a protein that exhibits amine transmembrane transporter activity (ortholog); enzyme binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); cellular response to ammonium ion (ortholog); cellular response to xenobiotic stimulus (ortholog); PARTICIPATES IN dopamine biosynthetic pathway; epinephrine biosynthetic pathway; norepinephrine biosynthetic pathway; ASSOCIATED WITH depressive disorder (ortholog); genetic disease (ortholog); infantile parkinsonism-dystonia 2 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell body (ortholog) 2 56820320 56854911 - 22301074;30032202 116891315 MODEL JAAIVD010000001;XM_032892229 XP_032748120 synaptic vesicular amine transporter protein-coding 626050104 LOC116907408 olfactory receptor 143-like 8 32124756 32125712 + 22301074;30032202 116907408 MODEL JAAIVD010000027;XM_032910365 XP_032766256 protein-coding 626050108 Pip prolactin induced protein ENCODES a protein that exhibits aspartic-type endopeptidase activity (ortholog); identical protein binding (ortholog); IgG binding (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); negative regulation of T cell apoptotic process (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH sinusitis (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 6 98525986 98530698 + 22301074;30032202 116902873 MODEL JAAIVD010000024;XM_032905204 XP_032761095 prolactin-inducible protein protein-coding 626050116 LOC116909552 keratin-associated protein 9-1-like 9 54609867 54610526 + 22301074;30032202 116909552 MODEL JAAIVD010000002;XM_032913168;XM_032913170 XP_032769059;XP_032769061 protein-coding 626050122 Anp32e acidic nuclear phosphoprotein 32 family member E ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); phosphatase inhibitor activity (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) 3 61344140 61360275 - 30032202 116896528 MODEL JAAIVD010000012;XM_032897709 XP_032753600 acidic leucine-rich nuclear phosphoprotein 32 family member E protein-coding 626050133 Cfap58 cilia and flagella associated protein 58 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); Notch signaling pathway (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 49 (ortholog); FOUND IN centrosome (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 2 47444295 47547859 + 30032202 116893818 MODEL JAAIVD010000001;XM_032895532 XP_032751423 cilia- and flagella-associated protein 58 protein-coding 626050155 Camsap1 calmodulin regulated spectrin associated protein 1 ENCODES a protein that exhibits calmodulin binding (ortholog); microtubule binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); microtubule cytoskeleton organization (ortholog); neuron projection development (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 12 (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN microtubule (ortholog); microtubule minus-end (ortholog) 5 11103578 11159697 + 22301074;30032202 116901281 MODEL JAAIVD010000023;XM_032903056;XM_032903057;XM_032903058;XM_032903059 XP_032758947;XP_032758948;XP_032758949;XP_032758950 calmodulin-regulated spectrin-associated protein 1 protein-coding 626050183 Fam181a family with sequence similarity 181 member A FOUND IN cytoplasm (ortholog) 7 114603350 114605508 + 116905866 MODEL JAAIVD010000026;XM_032908854 XP_032764745 protein FAM181A protein-coding 626050189 LOC116886960 histone H3.3A-like 18 33199114 33206564 + 116886960 MODEL JAAIVD010000013 pseudo 626050190 Tmem222 transmembrane protein 222 ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH MOTOR AND SPEECH DELAY AND BEHAVIORAL ABNORMALITIES (ortholog); FOUND IN dendrite (ortholog) 1 24976237 24988275 + 116895242 MODEL JAAIVD010000025;XM_032896564 XP_032752455 protein-coding 626050200 Aldh16a1 aldehyde dehydrogenase 16 family member A1 ASSOCIATED WITH gout (ortholog); HRPT-related hyperuricemia (ortholog); hyperuricemia (ortholog) 2 154387710 154401408 + 22301074 116892165 MODEL JAAIVD010000001;XM_032893663 XP_032749554 aldehyde dehydrogenase family 16 member A1 protein-coding 626050221 Cxcr5 C-X-C motif chemokine receptor 5 INVOLVED IN leukocyte chemotaxis (ortholog); lymph node development (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); FOUND IN external side of plasma membrane (ortholog) 8 39058273 39061559 - 22301074;30032202 116906663 MODEL JAAIVD010000027;XM_032909446 XP_032765337 C-X-C chemokine receptor type 5 protein-coding 626050227 LOC116889812 leukosialin-like 116889812 MODEL JAAIVD010001013 pseudo 626050228 LOC116898969 elongin-C-like 1 45491838 45493299 - 116898969 MODEL JAAIVD010000025 pseudo 626050229 LOC116887328 olfactory receptor 1361-like 18 10389563 10390492 + 22301074;30032202 116887328 MODEL JAAIVD010000013;XM_032888921 XP_032744812 protein-coding 626050232 Hace1 HECT domain and ankyrin repeat containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits small GTPase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN Golgi organization (ortholog); membrane fusion (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi membrane (ortholog); nuclear body (ortholog) 3 219412485 219520312 + 22301074;30032202 116897348 MODEL JAAIVD010000012;XM_032899106 XP_032754997 E3 ubiquitin-protein ligase HACE1 protein-coding 626050260 LOC116895489 peroxiredoxin-1-like 3 100681383 100681971 + 116895489 MODEL JAAIVD010000012 pseudo 626050261 LOC116904341 transformer-2 protein homolog beta-like 6 70115192 70257561 + 116904341 MODEL JAAIVD010000024 pseudo 626050262 LOC116888907 heterogeneous nuclear ribonucleoprotein A1-like X 96150776 96151689 - 116888907 MODEL JAAIVD010000014 pseudo 626050263 LOC116897823 activator of basal transcription 1-like 4 11039542 11040401 - 116897823 MODEL JAAIVD010000003 pseudo 626050264 Drd1 dopamine receptor D1 ENCODES a protein that exhibits angiotensin receptor binding (ortholog); arrestin family protein binding (ortholog); ATPase binding (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult walking behavior (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Albuminuria (ortholog); alcohol dependence (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); caveola (ortholog) 14 72417519 72421936 - 22301074;30032202 116883798 MODEL JAAIVD010000009;XM_032885043;XM_032885044 XP_032740934;XP_032740935 D(1A) dopamine receptor protein-coding 626050273 Amer3 APC membrane recruitment protein 3 ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog) 4 110809917 110821749 + 30032202 116899278 MODEL JAAIVD010000003;XM_032900907;XM_032900908;XM_032900909 XP_032756798;XP_032756799;XP_032756800 protein-coding 626050284 LOC116899799 U7 small nuclear RNA 4 140001873 140001935 - 116899799 MODEL JAAIVD010000003;XR_004387801 snrna 626050287 Col27a1 collagen type XXVII alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); INVOLVED IN extracellular matrix organization (ortholog); growth plate cartilage chondrocyte development (ortholog); ASSOCIATED WITH genetic disease (ortholog); Steel Syndrome (ortholog); FOUND IN fibrillar collagen trimer (ortholog) 1 90234784 90353879 - 22301074 116901289 MODEL JAAIVD010000025;XM_032903081 XP_032758972 collagen alpha-1(XXVII) chain protein-coding 626050352 LOC116903047 interferon alpha-7-like 1 123651985 123652557 - 22301074;30032202 116903047 MODEL JAAIVD010000025;XM_032905350 XP_032761241 protein-coding 626050355 Fam171b family with sequence similarity 171 member B FOUND IN synapse (ortholog) 5 61289069 61344936 + 116901577 MODEL JAAIVD010000023;XM_032903575 XP_032759466 protein FAM171B protein-coding 626050367 Synrg synergin gamma ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN clathrin coat of trans-Golgi network vesicle (ortholog) 9 86636179 86714769 - 22301074;30032202 116910104 MODEL JAAIVD010000002;XM_032913932 XP_032769823 protein-coding 626050393 LOC116914899 disintegrin and metalloproteinase domain-containing protein 26A-like 13 44739687 44741825 - 22301074;30032202 116914899 MODEL JAAIVD010000008;XM_032919342 XP_032775233 protein-coding 626050396 LOC116901704 cleavage stimulation factor subunit 3-like 5 82499659 82518042 + 22301074;30032202 116901704 MODEL JAAIVD010000023;XM_032903833 XP_032759724 protein-coding 626050403 LOC116886088 optic atrophy 3 protein homolog 17 19565066 19565602 + 116886088 MODEL JAAIVD010000011 pseudo 626050404 LOC116905761 phosphoglycerate mutase 1-like 7 6670827 6672576 - 116905761 MODEL JAAIVD010000026 pseudo 626050405 Zdhhc12 zDHHC palmitoyltransferase 12 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN chaperone-mediated autophagy (ortholog); gamma-aminobutyric acid receptor clustering (ortholog); gephyrin clustering involved in postsynaptic density assembly (ortholog); FOUND IN dendritic spine (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 30032202 116889764 MODEL JAAIVD010000081;XM_032890624 XP_032746515 probable palmitoyltransferase ZDHHC12;zinc finger DHHC-type palmitoyltransferase 12 protein-coding 626050406 Marchf5 membrane associated ring-CH-type finger 5 ENCODES a protein that exhibits GTPase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) 2 36602669 36624762 - 22301074 116891133 MODEL JAAIVD010000001;XM_032891866;XM_032891867 XP_032747757;XP_032747758 E3 ubiquitin-protein ligase MARCH5 protein-coding 626050420 Abcb10 ATP binding cassette subfamily B member 10 ENCODES a protein that exhibits ABC-type transporter activity (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN erythrocyte development (ortholog); export from the mitochondrion (ortholog); heme biosynthetic process (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 17 43505480 43536397 - 22301074;30032202 116886160 MODEL JAAIVD010000011;XM_032887528 XP_032743419 ATP-binding cassette sub-family B member 10, mitochondrial protein-coding 626050437 Pmm1 phosphomannomutase 1 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH GLOBAL DEVELOPMENTAL DELAY, ABSENT OR HYPOPLASTIC CORPUS CALLOSUM, AND DYSMORPHIC FACIES (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 1 251689134 251699787 - 22301074;30032202 116914123 MODEL JAAIVD010000025;XM_032918411 XP_032774302 protein-coding 626050449 Itga2b integrin subunit alpha 2b ENCODES a protein that exhibits extracellular matrix binding (ortholog); fibrinogen binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); positive regulation of leukocyte migration (ortholog); PARTICIPATES IN abciximab pharmacodynamics pathway; ephrin - ephrin receptor bidirectional signaling axis; eptifibatide pharmacodynamics pathway; ASSOCIATED WITH carotid artery thrombosis (ortholog); Cerebral Hemorrhage (ortholog); Endotoxemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) 9 61746733 61764257 - 22301074;30032202 116908969 MODEL JAAIVD010000002;XM_032912432 XP_032768323 integrin alpha-IIb protein-coding 626050483 LOC116902471 U6 spliceosomal RNA 5 39524855 39524960 - 116902471 MODEL JAAIVD010000023;XR_004388089 snrna 626050486 LOC116897652 U2 spliceosomal RNA 3 110374854 110375034 - 116897652 MODEL JAAIVD010000012 pseudo 626050487 LOC116907398 serotransferrin-like 8 94485769 94533944 - 22301074;30032202 116907398 MODEL JAAIVD010000027;XM_032910351 XP_032766242 protein-coding 626050515 Ptpn12 protein tyrosine phosphatase non-receptor type 12 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); peptidyl-tyrosine dephosphorylation (ortholog); protein dephosphorylation (ortholog); ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytosol (ortholog); podosome (ortholog) 6 150291963 150359885 - 30032202 116904168 MODEL JAAIVD010000024;XM_032907070 XP_032762961 tyrosine-protein phosphatase non-receptor type 12 protein-coding 626050537 LOC116901878 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 5 100150803 100154512 + 116901878 MODEL JAAIVD010000023 pseudo 626050538 Alg9 ALG9 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); dol-P-Man:Man(8)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Il (ortholog) 8 45241281 45301824 + 30032202 116906803 MODEL JAAIVD010000027;XM_032909677 XP_032765568 alpha-1,2-mannosyltransferase ALG9 protein-coding 626050557 LOC116889175 40S ribosomal protein S7-like X 60658608 60659234 - 116889175 MODEL JAAIVD010000014 pseudo 626050558 Trim72 tripartite motif containing 72 ENCODES a protein that exhibits identical protein binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN muscle organ development (ortholog); muscle system process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); sarcolemma (ortholog) 2 73888514 73896887 - 22301074 116891443 MODEL JAAIVD010000001;XM_032892507;XM_032892508 XP_032748398;XP_032748399 tripartite motif-containing protein 72 protein-coding 626050573 LOC116913072 PHD finger protein 11-like 12 65020658 65038104 + 30032202 116913072 MODEL JAAIVD010000007;XM_032917204 XP_032773095 protein-coding 626050585 Thoc5 THO complex subunit 5 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); cell morphogenesis (ortholog); monocyte differentiation (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; ASSOCIATED WITH anemia (ortholog); breast carcinoma (ortholog); leukopenia (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 73872337 73904473 + 30032202 116912304 MODEL JAAIVD010000006;XM_032916314;XM_032916315;XM_032916316;XM_032916317;XM_032916318 XP_032772205;XP_032772206;XP_032772207;XP_032772208;XP_032772209 THO complex 5;THO complex subunit 5 homolog protein-coding 626050621 Ist1 IST1 factor associated with ESCRT-III ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cell division (ortholog); cytoskeleton-dependent cytokinesis (ortholog); establishment of protein localization (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytosol (ortholog) 17 29394469 29416467 - 22301074;30032202 116886056 MODEL JAAIVD010000011;XM_032887360 XP_032743251 IST1 homolog protein-coding 626050634 LOC116889553 U2 spliceosomal RNA X 130082878 130082963 + 116889553 MODEL JAAIVD010000014 pseudo 626050635 Cdc20b cell division cycle 20B INVOLVED IN de novo centriole assembly (ortholog); FOUND IN deuterosome (ortholog) 3 183689003 183764027 - 22301074;30032202 116896030 MODEL JAAIVD010000012;XM_032897036 XP_032752927 cell division cycle protein 20 homolog B protein-coding 626050653 LOC116908178 iron-sulfur cluster assembly 2 homolog, mitochondrial-like 8 50205629 50210601 + 116908178 MODEL JAAIVD010000027 pseudo 626050654 LOC116884108 putative Dol-P-Glc:Glc(2)Man(9)GlcNAc(2)-PP-Dol alpha-1,2-glucosyltransferase 1 263228506 263233234 + 22301074;30032202 116884108 MODEL JAAIVD010000025;XM_032885319 XP_032741210 protein-coding 626050661 LOC116893056 tear acid lipase-like protein 2 33468360 33485495 - 22301074;30032202 116893056 MODEL JAAIVD010000001;XM_032895017 XP_032750908 protein-coding 626050672 LOC116904433 tubulin beta chain-like 6 117499650 117504736 + 116904433 MODEL JAAIVD010000024 pseudo 626050673 Amotl2 angiomotin like 2 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN endothelial cell morphogenesis (ortholog); hippo signaling (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN apical plasma membrane (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 8 94020427 94036323 + 30032202 116907368 MODEL JAAIVD010000027;XM_032910319;XM_032910320 XP_032766210;XP_032766211 angiomotin-like protein 2 protein-coding 626050689 LOC116897624 small Cajal body-specific RNA 14 3 92048204 92048338 - 116897624 MODEL JAAIVD010000012;XR_004387605 ncrna 626050692 Unkl unk like zinc finger FOUND IN cytosol (ortholog) 9 2453908 2500530 + 22301074 116910552 MODEL JAAIVD010000002;XM_032914459;XM_032914460 XP_032770350;XP_032770351 putative E3 ubiquitin-protein ligase UNKL protein-coding 626050714 Srgap1 SLIT-ROBO Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cell migration (ortholog); Rho protein signal transduction (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Brain Hypoxia-Ischemia (ortholog); CAKUT (ortholog) 1 200215485 200480973 - 22301074;30032202 116909559 MODEL JAAIVD010000025;XM_032913180;XM_032913187 XP_032769071;XP_032769078 SLIT-ROBO Rho GTPase-activating protein 1 protein-coding 626050742 Znrf4 zinc and ring finger 4 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); negative regulation of nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 4 87895825 87897006 - 30032202 116898063 MODEL JAAIVD010000003;XM_032899459 XP_032755350 E3 ubiquitin-protein ligase ZNRF4 protein-coding 626050747 Armc10 armadillo repeat containing 10 ENCODES a protein that exhibits DNA binding domain binding (ortholog); p53 binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of growth rate (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 6 150951380 150967045 + 30032202 116904176 MODEL JAAIVD010000024;XM_032907079 XP_032762970 armadillo repeat-containing protein 10 protein-coding 626050757 LOC116894231 DDB1- and CUL4-associated factor 8-like 2 108668102 108669939 - 116894231 MODEL JAAIVD010000001 pseudo 626050758 LOC116906372 small nucleolar RNA SNORD113/SNORD114 family 7 127256210 127256284 + 116906372 MODEL JAAIVD010000026;XR_004388641 snorna 626050761 LOC116913845 40S ribosomal protein S11-like 12 54393571 54394150 - 116913845 MODEL JAAIVD010000007 pseudo 626050762 Tab2 TGF-beta activated kinase 1 (MAP3K7) binding protein 2 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); heart development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH brain disease (ortholog); cardiomyopathy (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN cytoplasm (ortholog) 2 229104413 229151692 + 22301074;30032202 116893033 MODEL JAAIVD010000001;XM_032894996;XM_032894997 XP_032750887;XP_032750888 TGF-beta-activated kinase 1 and MAP3K7-binding protein 2 protein-coding 626050775 LOC116884006 olfactory receptor 11 14 41259423 41260793 - 22301074 116884006 MODEL JAAIVD010000009;XM_032885243 XP_032741134 protein-coding 626050779 Yipf1 Yip1 domain family member 1 FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog) 1 47445223 47482342 - 22301074;30032202 116899263 MODEL JAAIVD010000025;XM_032900884 XP_032756775 protein YIPF1 protein-coding 626050792 LOC116908090 cytochrome P450 1A1 8 51581464 51587649 + 22301074;30032202 116908090 MODEL JAAIVD010000027;XM_032911373 XP_032767264 protein-coding 626050803 Nr5a1 nuclear receptor subfamily 5 group A member 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); calcineurin-mediated signaling (ortholog); female gonad development (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); 46, XY Disorders of Sex Development (ortholog); 46,XX sex reversal 4 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 16464778 16486382 - 22301074;30032202 116900149 MODEL JAAIVD010000023;XM_032901921 XP_032757812 steroidogenic factor 1 protein-coding 626050814 Adamts18 ADAM metallopeptidase with thrombospondin type 1 motif 18 INVOLVED IN eye development (ortholog); negative regulation of platelet aggregation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog) 17 33362793 33507639 - 22301074;30032202 116886488 MODEL JAAIVD010000011;XM_032887990 XP_032743881 A disintegrin and metalloproteinase with thrombospondin motifs 18 protein-coding 626050841 Suz12 SUZ12 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); enzyme activator activity (ortholog); INVOLVED IN chromatin organization (ortholog); facultative heterochromatin formation (ortholog); negative regulation of cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Developmental Disease (ortholog); Endometrial Neoplasms (ortholog); FOUND IN chromatin silencing complex (ortholog); ESC/E(Z) complex (ortholog); nuclear body (ortholog) 9 90397288 90443204 - 30032202 116908646 MODEL JAAIVD010000002;XM_032911911 XP_032767802 polycomb protein SUZ12 protein-coding 626050861 Lsp1 lymphocyte specific protein 1 INVOLVED IN cellular response to interleukin-7 (ortholog); chemotaxis (ortholog); defense response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); calcinosis (ortholog) 2 6981593 7015361 - 22301074 116890846 MODEL JAAIVD010000001;XM_032891388;XM_032891389 XP_032747279;XP_032747280 lymphocyte-specific protein 1 protein-coding 626050879 Morc2 MORC family CW-type zinc finger 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); chromatin binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); constitutive heterochromatin formation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2Z (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); heterochromatin (ortholog) 11 72646230 72688922 + 22301074;30032202 116912604 MODEL JAAIVD010000006;XM_032916729;XR_004389472 XP_032772620 ATPase MORC2 protein-coding 626050912 Usp31 ubiquitin specific peptidase 31 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN nucleus (ortholog) 2 80094433 80156399 + 22301074 116891568 MODEL JAAIVD010000001;XM_032892748 XP_032748639 ubiquitin carboxyl-terminal hydrolase 31 protein-coding 626050932 LOC116893135 protein S100-A11-like 2 85272671 85272994 + 22301074;30032202 116893135 MODEL JAAIVD010000001;XM_032895064 XP_032750955 protein-coding 626050935 LOC116915238 uncharacterized LOC116915238 14 35456547 35487576 - 116915238 MODEL JAAIVD010000009;XR_004389856 ncrna 626050942 Wnt10a Wnt family member 10A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); epidermis morphogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Arthralgia (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); ectodermal dysplasia (ortholog) 4 148214764 148227684 + 22301074;30032202 116899513 MODEL JAAIVD010000003;XM_032901368 XP_032757259 protein Wnt-10a protein-coding 626050950 LOC116888121 uncharacterized LOC116888121 X 103381287 103389058 - 116888121 MODEL JAAIVD010000014 pseudo 626050951 LOC116893461 60S ribosomal protein L23a-like 2 179063770 179064156 - 116893461 MODEL JAAIVD010000001 pseudo 626050952 LOC116886529 60S ribosomal protein L35-like 17 19193106 19193489 - 22301074;30032202 116886529 MODEL JAAIVD010000011;XM_032888048 XP_032743939 protein-coding 626050956 Hemk1 HemK methyltransferase 1, mitochondrial release factors N(5)-glutamine ENCODES a protein that exhibits peptide chain release factor N(5)-glutamine methyltransferase activity (ortholog); FOUND IN mitochondrion (ortholog) 8 98643011 98653699 - 22301074;30032202 116907627 MODEL JAAIVD010000027;XM_032910687 XP_032766578 HemK methyltransferase family member 1;MTRF1L release factor glutamine methyltransferase protein-coding 626050971 Cfap73 cilia and flagella associated protein 73 16 33193486 33199479 + 30032202 116885267 MODEL JAAIVD010000004;XM_032886500 XP_032742391 cilia- and flagella-associated protein 73 protein-coding 626050980 Bfar bifunctional apoptosis regulator ENCODES a protein that exhibits caspase binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN IRE1-mediated unfolded protein response (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of IRE1-mediated unfolded protein response (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 9 8753747 8770782 + 22301074;30032202 116908658 MODEL JAAIVD010000002;XM_032911934;XM_032911935 XP_032767825;XP_032767826 protein-coding 626050996 Ncam1 neural cell adhesion molecule 1 ENCODES a protein that exhibits LRR domain binding (ortholog); phosphatase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); axonal fasciculation (ortholog); behavioral response to ethanol (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); adenoma (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 8 43989182 44283886 - 22301074 116907725 MODEL JAAIVD010000027;XM_032910851 XP_032766742 protein-coding 626051019 Hmox2 heme oxygenase 2 ENCODES a protein that exhibits heme oxygenase (decyclizing) activity (ortholog); INVOLVED IN response to hypoxia (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); migraine with aura (ortholog); FOUND IN plasma membrane (ortholog) 9 17124661 17155592 - 22301074;30032202 116910463 MODEL JAAIVD010000002;XM_032914332;XM_032914333 XP_032770223;XP_032770224 protein-coding 626051032 LOC116895353 pancreatic alpha-amylase-like 3 46553355 46561743 - 116895353 MODEL JAAIVD010000012 pseudo 626051033 LOC116911671 complement factor H-related protein 3-like 10 19948262 19982388 + 116911671 MODEL JAAIVD010000005;XM_032915625 XP_032771516 protein-coding 626051044 Mtfp1 mitochondrial fission process 1 INVOLVED IN apoptotic process (ortholog); mitochondrial fission (ortholog); mitochondrion organization (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH neuroblastoma (ortholog); Parkinson's disease 6 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 73079893 73083632 - 30032202 116912608 MODEL JAAIVD010000006;XM_032916733 XP_032772624 mitochondrial fission process protein 1 protein-coding 626051052 C3H5orf22 chromosome 3 C5orf22 homolog 3 168266604 168280922 + 116897115 MODEL JAAIVD010000012;XM_032898759;XM_032898760 XP_032754650;XP_032754651 UPF0489 protein C5orf22 homolog protein-coding 626051068 LOC116890612 U6atac minor spliceosomal RNA 1 167250840 167250960 - 116890612 MODEL JAAIVD010000025;XR_004386763 snrna 626051071 LOC116904756 small nucleolar RNA SNORA17 6 56063860 56063956 - 116904756 MODEL JAAIVD010000024 pseudo 626051072 LOC116908543 schlafen family member 12-like 9 87492447 87498208 - 116908543 MODEL JAAIVD010000002;XM_032911743;XM_032911744 XP_032767634;XP_032767635 protein-coding 626051081 LOC116897582 small nucleolar RNA SNORA17 3 218664324 218664451 - 116897582 MODEL JAAIVD010000012;XR_004387588 snorna 626051084 LOC116903890 murinoglobulin-1-like 6 24857811 24917294 - 22301074;30032202 116903890 MODEL JAAIVD010000024;XM_032906651 XP_032762542 protein-coding 626051121 Fpgs folylpolyglutamate synthase ENCODES a protein that exhibits tetrahydrofolylpolyglutamate synthase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); cell population proliferation (ortholog); folic acid-containing compound metabolic process (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; hereditary folate malabsorption pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Colorectal Neoplasms (ortholog); non-Hodgkin lymphoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 2944766 2956174 + 22301074;30032202 116901137 MODEL JAAIVD010000023;XM_032902738 XP_032758629 folylpolyglutamate synthase, mitochondrial protein-coding 626051140 Itgal integrin subunit alpha L ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ICAM-3 receptor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN activated T cell proliferation (ortholog); cell surface receptor signaling pathway (ortholog); cell-cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Behcet's disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); external side of plasma membrane (ortholog) 2 74553722 74589975 - 22301074;30032202 116891479 MODEL JAAIVD010000001;XM_032892579;XM_032892580 XP_032748470;XP_032748471 integrin alpha-L protein-coding 626051177 LOC116894603 vomeronasal type-1 receptor 4-like 2 182078490 182079386 - 22301074;30032202 116894603 MODEL JAAIVD010000001;XM_032896319 XP_032752210 protein-coding 626051180 Pcyox1 prenylcysteine oxidase 1 ENCODES a protein that exhibits FAD binding (ortholog); prenylcysteine oxidase activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); prenylated protein catabolic process (ortholog); prenylcysteine catabolic process (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN lysosome (ortholog); very-low-density lipoprotein particle (ortholog) 6 59906373 59918492 + 22301074;30032202 116903554 MODEL JAAIVD010000024;XM_032906169 XP_032762060 protein-coding 626051190 Fgd6 FYVE, RhoGEF and PH domain containing 6 ASSOCIATED WITH Kuhnt-Junius degeneration (ortholog); malignant mesothelioma (ortholog) 1 173130709 173293607 + 22301074;30032202 116908296 MODEL JAAIVD010000025;XM_032911576 XP_032767467 FYVE, RhoGEF and PH domain-containing protein 6 protein-coding 626051215 LOC116912817 galectin-9-like 11 56202626 56203665 - 116912817 MODEL JAAIVD010000006 pseudo 626051216 LOC116904687 small nucleolar RNA SNORA32 6 109229915 109230012 + 116904687 MODEL JAAIVD010000024 pseudo 626051217 LOC116890730 uncharacterized LOC116890730 2 2000142 2001232 + 116890730 MODEL JAAIVD010000001;XR_004386780 ncrna 626051221 LOC116894710 40S ribosomal protein S20-like 2 229255021 229255380 + 22301074;30032202 116894710 MODEL JAAIVD010000001;XM_032896405 XP_032752296 protein-coding 626051224 LOC116885037 small nucleolar RNA SNORA48 15 74500959 74501100 + 116885037 MODEL JAAIVD010000010;XR_004385924 snorna 626051227 Bcar1 BCAR1 scaffold protein, Cas family member ENCODES a protein that exhibits protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); antigen receptor-mediated signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; ASSOCIATED WITH breast cancer (ortholog); breast ductal carcinoma (ortholog); Ductal Carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); focal adhesion (ortholog) 17 31404835 31440000 - 22301074;30032202 116886161 MODEL JAAIVD010000011;XM_032887529;XM_032887530;XM_032887531 XP_032743420;XP_032743421;XP_032743422 breast cancer anti-estrogen resistance protein 1 protein-coding 626051244 Bltp3a bridge-like lipid transfer protein family member 3A ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); systemic lupus erythematosus (ortholog); FOUND IN late endosome (ortholog) 18 5958833 6001981 - 30032202 116887582 MODEL JAAIVD010000013;XM_032889207 XP_032745098 Uhrf1bp1 UHRF1 binding protein 1;UHRF1-binding protein 1 protein-coding 626051269 LOC116883990 uncharacterized LOC116883990 14 56684090 56693383 - 116883990 MODEL JAAIVD010000009;XR_004385806 ncrna 626051274 Atp13a2 ATPase cation transporting 13A2 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); polyamine transmembrane transporter activity (ortholog); INVOLVED IN autophagosome organization (ortholog); autophagosome-lysosome fusion (ortholog); autophagy (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 33 (ortholog); hereditary spastic paraplegia 78 (ortholog); FOUND IN autophagosome (ortholog); late endosome (ortholog); late endosome membrane (ortholog) 1 17139547 17159056 - 22301074;30032202 116893512 MODEL JAAIVD010000025;XM_032895248 XP_032751139 cation-transporting ATPase 13A2 protein-coding 626051307 LOC116896390 40S ribosomal protein S13-like 3 50914927 50915587 - 22301074;30032202 116896390 MODEL JAAIVD010000012;XM_032897520 XP_032753411 protein-coding 626051312 Terf2ip TERF2 interacting protein ENCODES a protein that exhibits G-rich strand telomeric DNA binding (ortholog); phosphatase binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of protein phosphorylation (ortholog); negative regulation of telomere maintenance (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 17 31697361 31704066 + 30032202 116886140 MODEL JAAIVD010000011;XM_032887493 XP_032743384 telomeric repeat-binding factor 2-interacting protein 1 protein-coding 626051319 Hapln4 hyaluronan and proteoglycan link protein 4 ENCODES a protein that exhibits structural constituent of synapse-associated extracellular matrix (ortholog); INVOLVED IN inhibitory synapse assembly (ortholog); synaptic transmission, GABAergic (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN perineuronal net (ortholog) 13 12350104 12355689 + 22301074 116914721 MODEL JAAIVD010000008;XM_032919151 XP_032775042 protein-coding 626051328 Snd1 staphylococcal nuclease and tudor domain containing 1 ENCODES a protein that exhibits endonuclease activity (ortholog); RISC complex binding (ortholog); RNA binding (ortholog); INVOLVED IN miRNA catabolic process (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hypospadias (ortholog); long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dense body (ortholog) 6 110662123 111058844 - 22301074;30032202 116904025 MODEL JAAIVD010000024;XM_032906855 XP_032762746 staphylococcal nuclease domain-containing protein 1 protein-coding 626051356 LOC116900964 olfactory receptor 6C1-like 5 102188627 102193193 - 116900964 MODEL JAAIVD010000023 pseudo 626051357 LOC116910506 meiosis regulator and mRNA stability factor 1-like 9 8082028 8126488 + 22301074;30032202 116910506 MODEL JAAIVD010000002;XM_032914404 XP_032770295 protein-coding 626051388 Brms1 BRMS1 transcriptional repressor and anoikis regulator ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of anoikis (ortholog); ASSOCIATED WITH invasive ductal carcinoma (ortholog); Neoplasm Invasiveness (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 2603418 2612802 - 30032202 116890746 MODEL JAAIVD010000001;XM_032891202 XP_032747093 breast cancer metastasis-suppressor 1 protein-coding 626051402 LOC116887661 small nuclear ribonucleoprotein G 18 36525787 36526042 + 22301074;30032202 116887661 MODEL JAAIVD010000013;XM_032889260 XP_032745151 protein-coding 626051406 LOC116902954 vomeronasal type-1 receptor 101 6 124217591 124218738 - 22301074;30032202 116902954 MODEL JAAIVD010000024;XM_032905279 XP_032761170 protein-coding 626051411 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 30018689 30018761 - 116886021 MODEL JAAIVD010000004 trna 626051412 Rex1bd required for excision 1-B domain containing 13 12759002 12761620 - 116914827 MODEL JAAIVD010000008;XM_032919281;XR_004389772 XP_032775172 required for excision 1-B domain-containing protein protein-coding 626051423 Mymk myomaker, myoblast fusion factor INVOLVED IN myoblast fusion (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); plasma membrane fusion (ortholog); ASSOCIATED WITH Carey-Fineman-Ziter syndrome (ortholog); Carey-Fineman-Ziter syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN Golgi membrane (ortholog); plasma membrane (ortholog) 5 9586521 9595699 + 30032202 116900071 MODEL JAAIVD010000023;XM_032901861 XP_032757752 protein myomaker protein-coding 626051432 LOC116892751 zinc finger protein 54-like 2 180866739 180876183 + 116892751 MODEL JAAIVD010000001 pseudo 626051433 LOC116906994 aromatase ENCODES a protein that exhibits aromatase activity (ortholog); heme binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN adrenal gland development (ortholog); androgen catabolic process (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN aromatase inhibitor pathway; estradiol biosynthetic pathway; steroid hormone biosynthetic pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); dendritic spine (ortholog); endoplasmic reticulum (ortholog) 8 48132439 48258933 - 22301074 116906994 MODEL JAAIVD010000027;XM_032909921 XP_032765812 protein-coding 626051446 LOC116897455 U6 spliceosomal RNA 3 91719761 91719867 - 116897455 MODEL JAAIVD010000012;XR_004387486 snrna 626051449 LOC116894514 vomeronasal type-1 receptor 1-like 2 174616134 174617054 - 22301074;30032202 116894514 MODEL JAAIVD010000001;XM_032896215 XP_032752106 protein-coding 626051452 Igfbp7 insulin like growth factor binding protein 7 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); Burns (ortholog); FOUND IN extracellular space (ortholog) 11 34106142 34167630 - 22301074;30032202 116912126 MODEL JAAIVD010000006;XM_032916035 XP_032771926 insulin-like growth factor-binding protein 7 protein-coding 626051461 LOC116883245 NF-kappa-B inhibitor-interacting Ras-like protein 1 14 65968423 65976268 + 116883245 MODEL JAAIVD010000009 pseudo 626051462 Slc2a3 solute carrier family 2 member 3 ENCODES a protein that exhibits D-glucose binding (ortholog); D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); D-glucose import (ortholog); D-glucose import across plasma membrane (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH acanthosis nigricans (ortholog); allergic contact dermatitis (ortholog); Alzheimer's disease (ortholog); FOUND IN acrosomal membrane (ortholog); aggresome (ortholog); caveola (ortholog) 6 24305177 24368942 + 22301074;30032202 116903308 MODEL JAAIVD010000024;XM_032905736;XM_032905737;XM_032905738 XP_032761627;XP_032761628;XP_032761629 solute carrier family 2, facilitated glucose transporter member 3 protein-coding 626051482 Slc36a2 solute carrier family 36 member 2 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); glycine transmembrane transporter activity (ortholog); L-alanine transmembrane transporter activity (ortholog); INVOLVED IN amino acid export across plasma membrane (ortholog); glycine transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH Glycinuria with or without Oxalate Urolithiasis (ortholog); iminoglycinuria (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) 9 37583191 37610209 - 30032202 116909417 MODEL JAAIVD010000002;XM_032912984 XP_032768875 proton-coupled amino acid transporter 2 protein-coding 626051496 Map2k7 mitogen-activated protein kinase kinase 7 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); JUN kinase kinase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to osmotic stress (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; FasL mediated signaling pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 16 2371589 2380894 + 22301074 116885216 MODEL JAAIVD010000004;XM_032886450;XM_032886451 XP_032742341;XP_032742342 dual specificity mitogen-activated protein kinase kinase 7 protein-coding 626051515 Arfgef2 ARF guanine nucleotide exchange factor 2 ENCODES a protein that exhibits GABA receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); myosin binding (ortholog); INVOLVED IN endomembrane system organization (ortholog); endosome organization (ortholog); exocytosis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN asymmetric synapse (ortholog); axonemal microtubule (ortholog); cytoplasmic vesicle (ortholog) 5 151074116 151158099 - 22301074 116902322 MODEL JAAIVD010000023;XM_032904773 XP_032760664 ADP ribosylation factor guanine nucleotide exchange factor 2;brefeldin A-inhibited guanine nucleotide-exchange protein 2 protein-coding 626051558 LOC116884559 SAP domain-containing ribonucleoprotein-like 15 33588461 33589403 - 30032202 116884559 MODEL JAAIVD010000010;XM_032885700 XP_032741591 protein-coding 626051563 Galnt17 polypeptide N-acetylgalactosaminyltransferase 17 16 22649438 23097402 + 30032202 116885237 MODEL JAAIVD010000004;XM_032886477 XP_032742368 protein-coding 626051578 Mrpl17 mitochondrial ribosomal protein L17 ENCODES a protein that exhibits protein domain specific binding (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 104650305 104652568 - 22301074;30032202 116891832 MODEL JAAIVD010000001;XM_032893196;XM_032893198;XM_032893199 XP_032749087;XP_032749089;XP_032749090 39S ribosomal protein L17, mitochondrial protein-coding 626051593 Slc6a6 solute carrier family 6 member 6 ENCODES a protein that exhibits alanine transmembrane transporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import across plasma membrane (ortholog); gamma-aminobutyric acid import (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); fundus dystrophy (ortholog); Hypertaurinuric Cardiomyopathy (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); dendrite (ortholog) 6 55184830 55258166 - 22301074;30032202 116903497 MODEL JAAIVD010000024;XM_032906090;XM_032906091;XM_032906092 XP_032761981;XP_032761982;XP_032761983 sodium- and chloride-dependent taurine transporter protein-coding 626051616 LOC116911246 40S ribosomal protein S20-like 10 3443153 3443657 - 116911246 MODEL JAAIVD010000005 pseudo 626051617 Mark4 microtubule affinity regulating kinase 4 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); gamma-tubulin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium disassembly (ortholog); cilium organization (ortholog); microtubule bundle formation (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 2 171165204 171196431 + 22301074;30032202 116892530 MODEL JAAIVD010000001;XM_032894288;XM_032894289 XP_032750179;XP_032750180 MAP/microtubule affinity-regulating kinase 4 protein-coding 626051642 Mga MAX dimerization protein MGA ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); multiple myeloma (ortholog); FOUND IN MLL1 complex (ortholog); transcription regulator complex (ortholog) 5 98059633 98123748 + 22301074;30032202 116901823 MODEL JAAIVD010000023;XM_032903982 XP_032759873 MAX gene-associated protein protein-coding 626051670 Dhx58 DExH-box helicase 58 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded RNA binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of innate immune response (ortholog); negative regulation of MDA-5 signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 9 59985257 59996372 - 22301074;30032202 116910064 MODEL JAAIVD010000002;XM_032913874;XM_032913875 XP_032769765;XP_032769766 probable ATP-dependent RNA helicase DHX58 protein-coding 626051689 Akap9 A-kinase anchoring protein 9 ENCODES a protein that exhibits molecular adaptor activity (ortholog); potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); maintenance of centrosome location (ortholog); microtubule nucleation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); Arsenic Poisoning (ortholog); FOUND IN 9+2 motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 6 136235428 136370008 + 30032202 116904124 MODEL JAAIVD010000024;XM_032907010 XP_032762901 A-kinase anchor protein 9 protein-coding 626051742 LOC116890482 small nucleolar RNA SNORA55 1 34969385 34969516 - 116890482 MODEL JAAIVD010000025;XR_004386670 snorna 626051745 Cnfn cornifelin FOUND IN cornified envelope (ortholog) 2 169348455 169350592 + 30032202 116892460 MODEL JAAIVD010000001;XM_032894176 XP_032750067 protein-coding 626051754 P3h1 prolyl 3-hydroxylase 1 INVOLVED IN bone development (ortholog); collagen fibril organization (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 3 (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 1 37706522 37721286 - 22301074;30032202 116897678 MODEL JAAIVD010000025;XM_032899154;XM_032899155 XP_032755045;XP_032755046 protein-coding 626051777 Synpr synaptoporin INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); synaptic vesicle membrane (ortholog) 12 83270868 83595625 + 22301074;30032202 116914057 MODEL JAAIVD010000007;XM_032918342;XM_032918343 XP_032774233;XP_032774234 protein-coding 626051790 Mnda myeloid cell nuclear differentiation antigen ENCODES a protein that exhibits double-stranded DNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); cellular response to interferon-alpha (ortholog); cellular response to interferon-beta (ortholog); FOUND IN cytosol (ortholog); nuclear inclusion body (ortholog); nuclear periphery (ortholog) 10 52696458 52714262 - 30032202 116911475 MODEL JAAIVD010000005;XM_032915458 XP_032771349 protein-coding 626051802 LOC116889356 SMR1 protein-like X 122773940 122780577 - 30032202 116889356 MODEL JAAIVD010000014;XM_032890465 XP_032746356 protein-coding 626051809 Gcm2 glial cells missing transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion homeostasis (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH familial isolated hypoparathyroidism (ortholog); familial isolated hypoparathyroidism 2 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 14 60096883 60104212 - 30032202 116915214 MODEL JAAIVD010000009;XM_032919593 XP_032775484 chorion-specific transcription factor GCMb protein-coding 626051816 Crmp1 collapsin response mediator protein 1 ENCODES a protein that exhibits filamin binding (ortholog); identical protein binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); neuron development (ortholog); regulation of postsynapse assembly (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cytosol (ortholog) 11 67866422 67911892 - 22301074;30032202 116912088 MODEL JAAIVD010000006;XM_032915972;XM_032915973 XP_032771863;XP_032771864 dihydropyrimidinase-related protein 1 protein-coding 626051837 LOC116897563 small nucleolar RNA SNORA17 3 219155258 219155383 - 116897563 MODEL JAAIVD010000012;XR_004387575 snorna 626051840 LOC116888461 uncharacterized LOC116888461 1 92343840 92347284 - 116888461 MODEL JAAIVD010000025;XR_004386313 ncrna 626051845 Pate1 prostate and testis expressed 1 ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); INVOLVED IN regulation of neurotransmitter receptor activity (ortholog) 8 31217994 31220241 - 116906552 MODEL JAAIVD010000027;XM_032909266 XP_032765157 prostate and testis expressed protein 1 protein-coding 626051852 LOC116913076 U1 small nuclear ribonucleoprotein C-like 12 71925177 71925630 - 116913076 MODEL JAAIVD010000007 pseudo 626051853 Sacs sacsin molecular chaperone ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN negative regulation of inclusion body assembly (ortholog); ASSOCIATED WITH ATAXIA, SPASTIC, CHILDHOOD-ONSET, AUTOSOMAL RECESSIVE, WITH OPTIC ATROPHY AND MENTAL RETARDATION (ortholog); Charcot-Marie-Tooth disease X-linked dominant 1 (ortholog); Charlevoix-Saguenay spastic ataxia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 12 63207716 63289556 - 30032202 116913814 MODEL JAAIVD010000007;XM_032918125;XM_032918126;XM_032918127;XM_032918128;XM_032918129 XP_032774016;XP_032774017;XP_032774018;XP_032774019;XP_032774020 sacsin protein-coding 626051881 LOC116906459 small nucleolar RNA SNORA17 7 86191825 86191951 + 116906459 MODEL JAAIVD010000026;XR_004388714 snorna 626051884 LOC116889494 small nucleolar RNA SNORA48 X 37471452 37471595 - 116889494 MODEL JAAIVD010000014;XR_004386443 snorna 626051887 Virma vir like m6A methyltransferase associated INVOLVED IN mRNA processing (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 1 132036641 132095661 - 30032202 116903390 MODEL JAAIVD010000025;XM_032905892;XM_032905901 XP_032761783;XP_032761792 protein virilizer homolog protein-coding 626051917 Bbs12 Bardet-Biedl syndrome 12 INVOLVED IN chaperone-mediated protein complex assembly (ortholog); eating behavior (ortholog); intraciliary transport (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 12 (ortholog) 3 116707727 116709856 - 22301074;30032202 116896921 MODEL JAAIVD010000012;XM_032898487 XP_032754378 Bardet-Biedl syndrome 12 protein protein-coding 626051921 LOC116900367 olfactory receptor 10AG1-like 5 69418515 69419483 + 22301074 116900367 MODEL JAAIVD010000023;XM_032902116 XP_032758007 protein-coding 626051924 LOC116888271 cysteine-rich perinuclear theca protein 1-like X 105760604 105761303 - 116888271 MODEL JAAIVD010000014;XM_032889548 XP_032745439 protein-coding 626051929 Rgs8 regulator of G protein signaling 8 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled acetylcholine receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); regulation of dopamine receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog); neuronal cell body membrane (ortholog) 10 33121653 33153942 + 116911190 MODEL JAAIVD010000005;XM_032915060 XP_032770951 regulator of G-protein signaling 8 protein-coding 626051939 LOC116908302 IQ domain-containing protein F5 8 97811561 97813041 + 30032202 116908302 MODEL JAAIVD010000027;XM_032911580 XP_032767471 protein-coding 626051945 LOC116894869 U6 spliceosomal RNA 2 160819027 160819132 + 116894869 MODEL JAAIVD010000001;XR_004387082 snrna 626051948 LOC116889258 short stature homeobox protein 2-like X 103403275 103409153 - 22301074 116889258 MODEL JAAIVD010000014;XM_032890405 XP_032746296 protein-coding 626051955 LOC116900940 serine/arginine-rich splicing factor 3-like 5 86948914 86951246 - 116900940 MODEL JAAIVD010000023 pseudo 626051956 LOC116886769 5S ribosomal RNA 17 43158864 43158993 - 116886769 MODEL JAAIVD010000011 pseudo 626051957 LOC116904439 cystic fibrosis transmembrane conductance regulator-like 6 120689663 120732051 - 22301074;30032202 116904439 MODEL JAAIVD010000024;XM_032907267 XP_032763158 protein-coding 626051968 Zswim8 zinc finger SWIM-type containing 8 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of miRNA catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cullin-RING ubiquitin ligase complex (ortholog); cytosol (ortholog) 12 90515253 90530852 + 22301074;30032202 116913111 MODEL JAAIVD010000007;XM_032917253;XM_032917254;XM_032917255;XM_032917256;XM_032917257;XM_032917258;XM_032917259;XM_032917261;XM_032917262;XM_032917263 XP_032773144;XP_032773145;XP_032773146;XP_032773147;XP_032773148;XP_032773149;XP_032773150;XP_032773152;XP_032773153;XP_032773154 zinc finger SWIM domain-containing protein 8 protein-coding 626052019 LOC116901621 low-density lipoprotein receptor-related protein 4-like 5 65611844 65631488 + 22301074 116901621 MODEL JAAIVD010000023;XM_032903672 XP_032759563 protein-coding 626052034 Aknad1 AKNA domain containing 1 3 49483119 49521388 - 116895360 MODEL JAAIVD010000012;XM_032896657 XP_032752548 protein AKNAD1 protein-coding 626052051 Matn3 matrilin 3 INVOLVED IN cartilage development (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); genetic disease (ortholog); multiple epiphyseal dysplasia (ortholog); FOUND IN extracellular matrix (ortholog); matrilin complex (ortholog) 7 29195097 29214661 + 22301074 116905612 MODEL JAAIVD010000026;XM_032908601 XP_032764492 matrilin-3 protein-coding 626052061 LOC116889788 uncharacterized LOC116889788 116889788 MODEL JAAIVD010000684;XR_004386510 ncrna 626052062 Znf516 zinc finger protein 516 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN adipose tissue development (ortholog); brown fat cell differentiation (ortholog); positive regulation of cold-induced thermogenesis (ortholog); FOUND IN nucleus (ortholog) 15 49323497 49365196 - 30032202 116884378 MODEL JAAIVD010000010;XM_032885495 XP_032741386 protein-coding 626052069 Prpsap1 phosphoribosyl pyrophosphate synthetase associated protein 1 ENCODES a protein that exhibits enzyme regulator activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN negative regulation of kinase activity (ortholog); FOUND IN protein-containing complex (ortholog); ribose phosphate diphosphokinase complex (ortholog) 9 67583457 67604911 + 22301074;30032202 116908956 MODEL JAAIVD010000002;XM_032912415 XP_032768306 phosphoribosyl pyrophosphate synthase-associated protein 1 protein-coding 626052083 LOC116899747 U6 spliceosomal RNA 4 180643924 180644030 - 116899747 MODEL JAAIVD010000003;XR_004387762 snrna 626052086 LOC116907957 cystatin-C-like 8 66669359 66670072 + 22301074;30032202 116907957 MODEL JAAIVD010000027;XM_032911185 XP_032767076 protein-coding 626052091 Henmt1 HEN methyltransferase 1 ENCODES a protein that exhibits O-methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); small RNA 2'-O-methyltransferase activity (ortholog); INVOLVED IN piRNA processing (ortholog); RNA methylation (ortholog); ASSOCIATED WITH azoospermia (ortholog); male infertility (ortholog) 3 49322061 49333312 - 30032202 116896350 MODEL JAAIVD010000012;XM_032897452 XP_032753343 small RNA 2'-O-methyltransferase protein-coding 626052102 Krt6a keratin 6A INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-positive bacterium (ortholog); intermediate filament organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); pachyonychia congenita (ortholog); Pachyonychia Congenita 3 (ortholog) 1 261375617 261380008 + 22301074;30032202 116883672 MODEL JAAIVD010000025;XM_032884875 XP_032740766 keratin, type II cytoskeletal 6A protein-coding 626052115 LOC116900172 peptidyl-prolyl cis-trans isomerase A-like 5 31081731 31082228 - 116900172 MODEL JAAIVD010000023 pseudo 626052116 LOC116889437 U6 spliceosomal RNA X 93097440 93097546 + 116889437 MODEL JAAIVD010000014;XR_004386399 snrna 626052119 Fryl FRY like transcription coactivator ASSOCIATED WITH Cocaine-Related Disorders (ortholog); Neurodevelopmental Disorders (ortholog); Pan-Chung-Bellen syndrome (ortholog) 11 29830356 29995834 - 30032202 116912310 MODEL JAAIVD010000006;XM_032916330 XP_032772221 protein furry homolog-like protein-coding 626052185 Rhbdd2 rhomboid domain containing 2 FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) 16 18385591 18396292 - 22301074;30032202 116885494 MODEL JAAIVD010000004;XM_032886784;XM_032886785 XP_032742675;XP_032742676 rhomboid domain-containing protein 2 protein-coding 626052197 Slc25a21 solute carrier family 25 member 21 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial alpha-ketoglutarate transmembrane transport (ortholog); ASSOCIATED WITH mitochondrial DNA depletion syndrome 18 (ortholog); FOUND IN mitochondrion (ortholog) 7 70077563 70552031 - 116905068 MODEL JAAIVD010000026;XM_032907774 XP_032763665 mitochondrial 2-oxodicarboxylate carrier protein-coding 626052211 Cuzd1 CUB and zona pellucida like domains 1 INVOLVED IN hormone-mediated signaling pathway (ortholog); trypsinogen activation (ortholog); FOUND IN membrane (ortholog); zymogen granule (ortholog); zymogen granule membrane (ortholog) 2 70520143 70532978 + 30032202 116891408 MODEL JAAIVD010000001;XM_032892435 XP_032748326 CUB and zona pellucida-like domain-containing protein 1 protein-coding 626052224 Mgp matrix Gla protein ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); lung development (ortholog); ossification (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriosclerosis (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) 6 12560355 12563584 + 22301074 116903148 MODEL JAAIVD010000024;XM_032905514 XP_032761405 protein-coding 626052232 Znf438 zinc finger protein 438 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 31537986 31664563 - 30032202 116883463 MODEL JAAIVD010000009;XM_032884612;XM_032884613;XM_032884615;XM_032884616 XP_032740503;XP_032740504;XP_032740506;XP_032740507 protein-coding 626052252 LOC116897954 olfactory receptor 5AC1-like 4 43170495 43171904 - 22301074;30032202 116897954 MODEL JAAIVD010000003;XM_032899353;XM_032899354 XP_032755244;XP_032755245 protein-coding 626052258 LOC116908191 receptor of activated protein C kinase 1-like 8 56159036 56204617 + 116908191 MODEL JAAIVD010000027 pseudo 626052259 Eif2b2 eukaryotic translation initiation factor 2B subunit beta ENCODES a protein that exhibits ATP binding (ortholog); GTP binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN central nervous system development (ortholog); cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 7 99327579 99334668 + 30032202 116905290 MODEL JAAIVD010000026;XM_032908152 XP_032764043 translation initiation factor eIF-2B subunit beta protein-coding 626052271 LOC116893420 vomeronasal type-1 receptor 1-like 2 174686703 174687651 + 116893420 MODEL JAAIVD010000001 pseudo 626052272 Lrrc24 leucine rich repeat containing 24 INVOLVED IN positive regulation of synapse assembly (ortholog) 1 249042396 249046679 - 22301074 116913393 MODEL JAAIVD010000025;XM_032917579 XP_032773470 leucine-rich repeat-containing protein 24 protein-coding 626052280 Ift52 intraflagellar transport 52 INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); dorsal/ventral pattern formation (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); gastrointestinal stromal tumor (ortholog); Short-Rib Thoracic Dysplasia 16 with or without Polydactyly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 5 154941720 154966312 - 30032202 116902388 MODEL JAAIVD010000023;XM_032904903;XM_032904904;XM_032904905 XP_032760794;XP_032760795;XP_032760796 intraflagellar transport protein 52 homolog protein-coding 626052301 LOC116907890 60S ribosomal protein L36a-like 8 62154610 62154969 - 22301074;30032202 116907890 MODEL JAAIVD010000027;XM_032911081 XP_032766972 protein-coding 626052305 Gabra2 gamma-aminobutyric acid type A receptor subunit alpha2 ENCODES a protein that exhibits benzodiazepine receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); ligand-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); inhibitory synapse assembly (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); anxiety disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendrite membrane (ortholog) 11 27872514 28007739 - 22301074;30032202 116912882 MODEL JAAIVD010000006;XM_032917120 XP_032773011 gamma-aminobutyric acid receptor subunit alpha-2 protein-coding 626052319 Timm29 translocase of inner mitochondrial membrane 29 ENCODES a protein that exhibits protein transporter activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 8 17863167 17864551 + 22301074;30032202 116908136 MODEL JAAIVD010000027;XM_032911430 XP_032767321 mitochondrial import inner membrane translocase subunit Tim29 protein-coding 626052325 LOC116899245 glutathione S-transferase alpha-5 4 98602827 98627508 + 22301074;30032202 116899245 MODEL JAAIVD010000003;XM_032900850;XM_032900851;XM_032900852 XP_032756741;XP_032756742;XP_032756743 protein-coding 626052344 LOC116906138 cytochrome c oxidase subunit 7B, mitochondrial-like 7 89864055 89864400 - 116906138 MODEL JAAIVD010000026 pseudo 626052345 LOC116885329 ubiquitin-conjugating enzyme E2 H-like 1 14390336 14390978 + 116885329 MODEL JAAIVD010000025 pseudo 626052346 LOC116902636 small nucleolar RNA U13 5 133425171 133425272 + 116902636 MODEL JAAIVD010000023;XR_004388213 snorna 626052349 Zmat2 zinc finger matrin-type 2 INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) 15 7582077 7586662 - 22301074;30032202 116884608 MODEL JAAIVD010000010;XM_032885749 XP_032741640 zinc finger matrin-type protein 2 protein-coding 626052358 LOC116890382 U6 spliceosomal RNA 1 152444088 152444186 + 116890382 MODEL JAAIVD010000025 pseudo 626052359 LOC116911378 40S ribosomal protein S6-like 10 36826782 36831054 - 116911378 MODEL JAAIVD010000005 pseudo 626052360 Meaf6 MYST/Esa1 associated factor 6 ENCODES a protein that exhibits histone H3K14 acetyltransferase activity (ortholog); histone H4K12 acetyltransferase activity (ortholog); histone H4K5 acetyltransferase activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); regulation of cell growth (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN histone acetyltransferase complex (ortholog); kinetochore (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog) 1 33194839 33218788 - 30032202 116896773 MODEL JAAIVD010000025;XM_032898234;XM_032898245;XM_032898258;XR_004387368;XR_004387369;XR_004387370 XP_032754125;XP_032754136;XP_032754149 chromatin modification-related protein MEAF6 protein-coding 626052383 Cdipt CDP-diacylglycerol--inositol 3-phosphatidyltransferase ENCODES a protein that exhibits alcohol binding (ortholog); carbohydrate binding (ortholog); CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity (ortholog); INVOLVED IN CDP-diacylglycerol metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; phosphoinositide metabolic pathway; FOUND IN membrane (ortholog) 2 74913337 74917674 - 22301074;30032202 116891494 MODEL JAAIVD010000001;XM_032892600;XM_032892601;XM_032892602 XP_032748491;XP_032748492;XP_032748493 protein-coding 626052401 Dlx3 distal-less homeobox 3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN blood vessel development (ortholog); BMP signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); amelogenesis imperfecta type 4 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 59258964 59264182 - 22301074;30032202 116910113 MODEL JAAIVD010000002;XM_032913943 XP_032769834 homeobox protein DLX-3 protein-coding 626052408 LOC116912530 histone H2A.V ENCODES a protein that exhibits molecular adaptor activity (ortholog); FOUND IN nucleosome (ortholog); nucleus (ortholog) 11 75356582 75374063 - 22301074;30032202 116912530 MODEL JAAIVD010000006;XM_032916629;XM_032916631 XP_032772520;XP_032772522 protein-coding 626052418 LOC116909840 testis-expressed protein 19.1 9 62879067 62880874 - 30032202 116909840 MODEL JAAIVD010000002;XM_032913565 XP_032769456 protein-coding 626052424 Galns galactosamine (N-acetyl)-6-sulfatase ENCODES a protein that exhibits N-acetylgalactosamine-6-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Inflammation (ortholog); FOUND IN lysosome (ortholog) 17 42207627 42239989 - 22301074;30032202 116886172 MODEL JAAIVD010000011;XM_032887544 XP_032743435 N-acetylgalactosamine-6-sulfatase protein-coding 626052442 LOC116903974 high mobility group protein B1-like 1 148023019 148023958 - 116903974 MODEL JAAIVD010000025;XR_004388317 pseudo 626052445 LOC116897089 60S ribosomal protein L23a-like 1 28857140 28871162 - 116897089 MODEL JAAIVD010000025 pseudo 626052446 LOC116893217 olfactory receptor 14A2-like 2 114621734 114622704 - 116893217 MODEL JAAIVD010000001 pseudo 626052447 LOC116910772 U6 spliceosomal RNA 9 66261240 66261343 + 116910772 MODEL JAAIVD010000002;XR_004389280 snrna 626052450 Rab3ip RAB3A interacting protein ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of filopodium assembly (ortholog); protein targeting to membrane (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 195053362 195093895 - 30032202 116909202 MODEL JAAIVD010000025;XM_032912701;XM_032912711;XM_032912717 XP_032768592;XP_032768602;XP_032768608 rab-3A-interacting protein protein-coding 626052470 Khdrbs2 KH RNA binding domain containing, signal transduction associated 2 ENCODES a protein that exhibits poly(A) binding (ortholog); poly(U) RNA binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH melanoma (ortholog) 4 108539225 108988719 + 30032202 116899264 MODEL JAAIVD010000003;XM_032900880;XM_032900881 XP_032756771;XP_032756772 KH domain-containing, RNA-binding, signal transduction-associated protein 2 protein-coding 626052487 LOC116902779 pyroglutamylated RF-amide peptide receptor-like 6 76132615 76204287 - 22301074;30032202 116902779 MODEL JAAIVD010000024;XM_032905121 XP_032761012 protein-coding 626052497 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 71072716 71072787 + 116890653 MODEL JAAIVD010000025 trna 626052498 Dhrs9 dehydrogenase/reductase 9 ENCODES a protein that exhibits alcohol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NAD+) activity (ortholog); androstan-3-alpha,17-beta-diol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); androgen metabolic process (ortholog); progesterone metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Birth Weight (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 5 46688970 46712879 + 116901480 MODEL JAAIVD010000023;XM_032903430;XM_032903433;XM_032903434 XP_032759321;XP_032759324;XP_032759325 dehydrogenase/reductase SDR family member 9 protein-coding 626052514 Gfy golgi associated olfactory signaling regulator INVOLVED IN non-motile cilium assembly (ortholog); protein localization to non-motile cilium (ortholog); sensory perception of smell (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 2 154363419 154365575 + 116894346 MODEL JAAIVD010000001;XM_032896044 XP_032751935 Golgi-associated olfactory signaling regulator protein-coding 626052519 Reep6 receptor accessory protein 6 INVOLVED IN detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); optic atrophy (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 154546250 154551668 - 116905150 MODEL JAAIVD010000025;XM_032907923;XM_032907931;XM_032907938 XP_032763814;XP_032763822;XP_032763829 receptor expression-enhancing protein 6 protein-coding 626052534 LOC116900331 uncharacterized LOC116900331 1 64873296 64874354 + 116900331 MODEL JAAIVD010000025;XR_004387927 ncrna 626052538 Slc25a46 solute carrier family 25 member 46 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); cerebellar Purkinje cell differentiation (ortholog); cristae formation (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 6 (ortholog); Charcot-Marie-Tooth Disease Type 6B (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 15 12617905 12644928 + 30032202 116884335 MODEL JAAIVD010000010;XM_032885470 XP_032741361 protein-coding 626052550 LOC116898711 small ubiquitin-related modifier 2-like 4 6545640 6546504 - 116898711 MODEL JAAIVD010000003 pseudo 626052551 LOC116909804 olfactory receptor 2AK2-like 9 39257232 39258138 - 116909804 MODEL JAAIVD010000002 pseudo 626052552 Scamp2 secretory carrier membrane protein 2 INVOLVED IN protein transport (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog); recycling endosome membrane (ortholog) 8 51451473 51478515 + 22301074;30032202 116908082 MODEL JAAIVD010000027;XM_032911360 XP_032767251 secretory carrier-associated membrane protein 2 protein-coding 626052565 Mettl21a methyltransferase 21A, HSPA lysine ENCODES a protein that exhibits ATPase binding (ortholog); heat shock protein binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN negative regulation of protein folding (ortholog); protein methylation (ortholog); FOUND IN protein-containing complex (ortholog) 4 138481857 138490665 - 30032202 116899451 MODEL JAAIVD010000003;XM_032901228;XM_032901229;XM_032901230 XP_032757119;XP_032757120;XP_032757121 methyltransferase like 21A;protein N-lysine methyltransferase METTL21A protein-coding 626052579 LOC116883746 keratin, type II cuticular 87 1 261650472 261657403 + 22301074;30032202 116883746 MODEL JAAIVD010000025;XM_032884991;XM_032884997 XP_032740882;XP_032740888 protein-coding 626052593 LOC116912973 small nucleolar RNA SNORA17 11 3382432 3382563 + 116912973 MODEL JAAIVD010000006;XR_004389538 snorna 626052596 LOC116888809 putative protein SSX9 X 126570535 126578226 + 22301074;30032202 116888809 MODEL JAAIVD010000014;XM_032890088 XP_032745979 protein-coding 626052606 LOC116889882 vomeronasal type-2 receptor 116-like 1 157921361 157943221 + 22301074;30032202 116889882 MODEL JAAIVD010000025;XM_032890706 XP_032746597 protein-coding 626052614 Pou6f2 POU class 6 homeobox 2 ASSOCIATED WITH autistic disorder (ortholog); hypogonadotropic hypogonadism (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog) 14 36948058 37456633 - 30032202 116883615 MODEL JAAIVD010000009;XM_032884805;XM_032884806;XM_032884807 XP_032740696;XP_032740697;XP_032740698 POU domain, class 6, transcription factor 2 protein-coding 626052632 LOC116908445 U4 spliceosomal RNA 8 99993642 99993782 + 116908445 MODEL JAAIVD010000027;XR_004388968 snrna 626052635 Armc1 armadillo repeat containing 1 INVOLVED IN intracellular distribution of mitochondria (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 3 134831411 134871960 + 22301074 116897008 MODEL JAAIVD010000012;XM_032898614 XP_032754505 armadillo repeat-containing protein 1 protein-coding 626052646 Kcnrg potassium channel regulator ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of delayed rectifier potassium channel activity (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 62809559 62826049 - 22301074;30032202 116913436 MODEL JAAIVD010000007;XM_032917636;XR_004389616 XP_032773527 potassium channel regulatory protein protein-coding 626052655 Scfd1 sec1 family domain containing 1 ENCODES a protein that exhibits protein-containing complex binding (ortholog); syntaxin binding (ortholog); INVOLVED IN negative regulation of autophagosome assembly (ortholog); post-Golgi vesicle-mediated transport (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Reperfusion Injury (ortholog); FOUND IN cis-Golgi network (ortholog); Golgi-associated vesicle (ortholog) 7 64810447 64885896 + 30032202 116905032 MODEL JAAIVD010000026;XM_032907710 XP_032763601 sec1 family domain-containing protein 1 protein-coding 626052684 Cacnb4 calcium voltage-gated channel auxiliary subunit beta 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein kinase binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Ataxia (ortholog); dilated cardiomyopathy (ortholog); epilepsy (ortholog); FOUND IN glutamatergic synapse (ortholog); nuclear speck (ortholog); plasma membrane (ortholog) 5 30208570 30454701 - 22301074;30032202 116901407 MODEL JAAIVD010000023;XM_032903284;XM_032903285;XM_032903286 XP_032759175;XP_032759176;XP_032759177 voltage-dependent L-type calcium channel subunit beta-4 protein-coding 626052707 Sprtn SprT-like N-terminal domain ENCODES a protein that exhibits double-stranded DNA binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); metalloendopeptidase activity (ortholog); INVOLVED IN DNA damage response (ortholog); interstrand cross-link repair (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); genetic disease (ortholog); Genomic Instability (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 17 44410499 44415685 + 22301074;30032202 116886074 MODEL JAAIVD010000011;XM_032887388 XP_032743279 sprT-like domain-containing protein Spartan protein-coding 626052716 Snrpa1 small nuclear ribonucleoprotein polypeptide A' INVOLVED IN mRNA splicing, via spliceosome (ortholog); spermatogenesis (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH connective tissue disease (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear body (ortholog); nuclear speck (ortholog) 2 134281112 134294429 - 22301074;30032202 116891997 MODEL JAAIVD010000001;XM_032893451 XP_032749342 U2 small nuclear ribonucleoprotein A' protein-coding 626052729 LOC116887179 olfactory receptor 2A12-like 1 38080512 38081459 + 116887179 MODEL JAAIVD010000025 pseudo 626052730 LOC116911605 60S ribosomal protein L7-like 1 10 25381011 25381818 - 116911605 MODEL JAAIVD010000005 pseudo 626052731 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48629069 48629142 + 116910796 MODEL JAAIVD010000002 trna 626052732 Ccdc50 coiled-coil domain containing 50 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 44 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); mantle cell lymphoma (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 12843768 12891301 - 30032202 116898736 MODEL JAAIVD010000003;XM_032900046 XP_032755937 coiled-coil domain-containing protein 50 protein-coding 626052747 LOC116914858 uncharacterized LOC116914858 1 194799725 194804781 - 22301074 116914858 MODEL JAAIVD010000025;XM_032919336 XP_032775227 uncharacterized protein LOC116914858 protein-coding 626052751 Naprt nicotinate phosphoribosyltransferase ENCODES a protein that exhibits nicotinate phosphoribosyltransferase activity (ortholog); INVOLVED IN NAD+ biosynthetic process (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); response to oxidative stress (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; FOUND IN cytosol (ortholog) 1 248208859 248212289 - 22301074;30032202 116912732 MODEL JAAIVD010000025;XM_032916873 XP_032772764 protein-coding 626052768 Commd10 COMM domain containing 10 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN nucleoplasm (ortholog) 15 39929138 40056388 - 116884247 MODEL JAAIVD010000010;XM_032885331;XM_032885332 XP_032741222;XP_032741223 COMM domain-containing protein 10 protein-coding 626052780 Diaph3 diaphanous related formin 3 ENCODES a protein that exhibits actin binding (ortholog); cytoskeletal protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin cytoskeleton organization (ortholog); actin filament bundle assembly (ortholog); ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant auditory neuropathy 1 (ortholog); congenital dyserythropoietic anemia (ortholog); FOUND IN actin filament bundle (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) 12 37453627 37790260 + 22301074;30032202 116913127 MODEL JAAIVD010000007;XM_032917288;XM_032917289 XP_032773179;XP_032773180 protein diaphanous homolog 3 protein-coding 626052815 LOC116897491 small nucleolar RNA SNORD45 3 7733650 7733720 + 116897491 MODEL JAAIVD010000012;XR_004387512 snorna 626052818 LOC116893156 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 2 101157047 101157533 - 116893156 MODEL JAAIVD010000001 pseudo 626052819 Tmx3 thioredoxin related transmembrane protein 3 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum membrane (ortholog) 15 43370909 43402525 + 30032202 116884298 MODEL JAAIVD010000010;XM_032885397;XM_032885398 XP_032741288;XP_032741289 protein disulfide-isomerase TMX3 protein-coding 626052843 Eif2s1 eukaryotic translation initiation factor 2 subunit alpha ENCODES a protein that exhibits ribosome binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to heat (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 7 92972866 92998250 + 22301074;30032202 116905199 MODEL JAAIVD010000026;XM_032907995 XP_032763886 eukaryotic translation initiation factor 2 subunit 1 protein-coding 626052855 LOC116908373 small nucleolar RNA SNORA32 8 16472167 16472271 + 116908373 MODEL JAAIVD010000027 pseudo 626052856 Morn2 MORN repeat containing 2 7 12775981 12778753 - 116905606 MODEL JAAIVD010000026;XM_032908600 XP_032764491 MORN repeat-containing protein 2 protein-coding 626052863 Nkiras1 NFKB inhibitor interacting Ras like 1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); INVOLVED IN lung alveolus development (ortholog); Ral protein signal transduction (ortholog); regulation of tumor necrosis factor-mediated signaling pathway (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 12 87315833 87321610 + 22301074;30032202 116913999 MODEL JAAIVD010000007;XM_032918271 XP_032774162 NF-kappa-B inhibitor-interacting Ras-like protein 1 protein-coding 626052871 LOC116890143 lymphocyte antigen 6B-like 1 247771306 247774482 + 30032202 116890143 MODEL JAAIVD010000025;XM_032890877 XP_032746768 protein-coding 626052877 Rnf26 ring finger protein 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN endosome organization (ortholog); negative regulation of defense response to virus (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 38671850 38674597 - 30032202 116907367 MODEL JAAIVD010000027;XM_032910318 XP_032766209 E3 ubiquitin-protein ligase RNF26 protein-coding 626052882 LOC116909438 vomeronasal type-2 receptor 116-like 9 79661379 79666508 + 22301074;30032202 116909438 MODEL JAAIVD010000002;XM_032913013 XP_032768904 protein-coding 626052889 LOC116887859 40S ribosomal protein S7-like 1 62193500 62194078 - 116887859 MODEL JAAIVD010000025 pseudo 626052890 LOC116913618 60S ribosomal protein L23a-like 12 67671888 67672414 - 22301074;30032202 116913618 MODEL JAAIVD010000007;XM_032917871 XP_032773762 protein-coding 626052894 Fcgr3a Fc fragment of IgG receptor IIIa ENCODES a protein that exhibits IgE receptor activity (ortholog); IgG receptor activity (ortholog); immune receptor activity (ortholog); INVOLVED IN antibody-dependent cellular cytotoxicity (ortholog); calcium-mediated signaling (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH allergic disease (ortholog); allergic rhinitis (ortholog); ankylosing spondylitis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 10 50197313 50207557 + 30032202 116911254 MODEL JAAIVD010000005;XM_032915154 XP_032771045 low affinity immunoglobulin gamma Fc region receptor III-A protein-coding 626052903 LOC116888352 ubiquitin-60S ribosomal protein L40-like X 18407329 18407926 + 116888352 MODEL JAAIVD010000014 pseudo 626052904 Slamf1 signaling lymphocytic activation molecule family member 1 ENCODES a protein that exhibits identical protein binding (ortholog); SH2 domain binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN leukocyte chemotaxis involved in inflammatory response (ortholog); myeloid dendritic cell activation involved in immune response (ortholog); natural killer cell differentiation (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); phagocytic vesicle (ortholog) 10 50923741 50959411 + 22301074 116911399 MODEL JAAIVD010000005;XM_032915360 XP_032771251 signaling lymphocytic activation molecule protein-coding 626052915 LOC116907959 UHRF1-binding protein 1-like 1 168890508 168892716 + 116907959 MODEL JAAIVD010000025;XM_032911189 XP_032767080 protein-coding 626052921 Ipo7 importin 7 ENCODES a protein that exhibits histone binding (ortholog); SMAD binding (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of odontoblast differentiation (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 91400086 91439697 - 22301074;30032202 116891665 MODEL JAAIVD010000001;XM_032892917 XP_032748808 importin-7 protein-coding 626052950 Sema5b semaphorin 5B INVOLVED IN axon extension (ortholog); detection of light stimulus involved in visual perception (ortholog); neuron projection extension (ortholog) 4 20397155 20438586 + 30032202 116898810 MODEL JAAIVD010000003;XM_032900161 XP_032756052 semaphorin-5B protein-coding 626052975 Ptpn7 protein tyrosine phosphatase non-receptor type 7 FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 10 566175 576253 - 22301074;30032202 116911579 MODEL JAAIVD010000005;XM_032915561 XP_032771452 tyrosine-protein phosphatase non-receptor type 7 protein-coding 626052988 LOC116892743 uncharacterized LOC116892743 2 180676728 180694465 - 116892743 MODEL JAAIVD010000001;XR_004386968 ncrna 626052993 LOC116890483 U1 spliceosomal RNA 1 78009293 78009456 + 116890483 MODEL JAAIVD010000025;XR_004386671 snrna 626052996 Rpf1 ribosome production factor 1 homolog ENCODES a protein that exhibits RNA binding (ortholog); FOUND IN nucleolus (ortholog) 3 14382159 14396927 + 30032202 116896167 MODEL JAAIVD010000012;XM_032897202 XP_032753093 ribosome production factor 1 protein-coding 626053009 LOC116889789 GTPase IMAP family member 9-like 22301074 116889789 MODEL JAAIVD010000307;XM_032890639 XP_032746530 protein-coding 626053010 LOC116902151 alpha-enolase-like 5 133051385 133052736 + 22301074;30032202 116902151 MODEL JAAIVD010000023;XM_032904485 XP_032760376 protein-coding 626053015 LOC116887627 olfactory receptor 11A1-like 18 10391850 10397485 - 22301074 116887627 MODEL JAAIVD010000013;XM_032889229 XP_032745120 protein-coding 626053019 Rpl26 ribosomal protein L26 ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to ionizing radiation (ortholog); cellular response to UV (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 11 (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 9 48499237 48502466 + 22301074;2546830;30032202 116909724 MODEL JAAIVD010000002;X14671;XM_032913400 CAA32801;XP_032769291 60S ribosomal protein L26 protein-coding 626053027 LOC116909537 60S ribosomal protein L30-like 9 48315370 48315749 - 30032202 116909537 MODEL JAAIVD010000002;XM_032913154 XP_032769045 protein-coding 626053031 Spag5 sperm associated antigen 5 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN chromosome segregation (ortholog); establishment of spindle orientation (ortholog); mitotic sister chromatid segregation (ortholog); ASSOCIATED WITH cervical cancer (ortholog); COVID-19 (ortholog); Spontaneous Abortions (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); ciliary rootlet (ortholog) 9 92117461 92134794 - 30032202 116909807 MODEL JAAIVD010000002;XM_032913503 XP_032769394 sperm-associated antigen 5 protein-coding 626053059 Spr sepiapterin reductase ENCODES a protein that exhibits protein homodimerization activity (ortholog); sepiapterin reductase (NADP+) activity (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); dopamine metabolic process (ortholog); L-phenylalanine metabolic process (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH COVID-19 (ortholog); DOPA-responsive dystonia (ortholog); dystonia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 6 61062451 61066232 + 22301074;30032202 116903582 MODEL JAAIVD010000024;XM_032906205 XP_032762096 protein-coding 626053066 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41814813 41814906 + 116884220 MODEL JAAIVD010000009 trna 626053067 LOC116898276 olfactory receptor 12-like 4 164544677 164545648 + 22301074;30032202 116898276 MODEL JAAIVD010000003;XM_032899628 XP_032755519 protein-coding 626053070 Gnpda1 glucosamine-6-phosphate deaminase 1 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); glucosamine catabolic process (ortholog); UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) 15 6586886 6597744 + 22301074;30032202 116884651 MODEL JAAIVD010000010;XM_032885808 XP_032741699 glucosamine-6-phosphate isomerase 1 protein-coding 626053081 Ugp2 UDP-glucose pyrophosphorylase 2 ENCODES a protein that exhibits D-glucose binding (ortholog); identical protein binding (ortholog); pyrimidine ribonucleotide binding (ortholog); INVOLVED IN brain development (ortholog); glucose 1-phosphate metabolic process (ortholog); glycogen biosynthetic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; galactokinase deficiency pathway; galactose metabolic pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 83 (ortholog); genetic disease (ortholog) 11 89505254 89548991 - 22301074;30032202 116912432 MODEL JAAIVD010000006;XM_032916500;XM_032916501 XP_032772391;XP_032772392 UTP--glucose-1-phosphate uridylyltransferase protein-coding 626053098 LOC116895072 small nucleolar RNA SNORA40 2 167642166 167642290 - 116895072 MODEL JAAIVD010000001;XR_004387241 snorna 626053101 Lpar6 lysophosphatidic acid receptor 6 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH hypotrichosis (ortholog); hypotrichosis 1 (ortholog); hypotrichosis 8 (ortholog); FOUND IN plasma membrane (ortholog) 12 51169030 51171021 - 22301074;30032202 116913677 MODEL JAAIVD010000007;XM_032917965 XP_032773856 protein-coding 626053106 LOC116886016 small nucleolar RNA SNORA81 16 24002920 24003101 + 116886016 MODEL JAAIVD010000004;XR_004386085 snorna 626053109 LOC116888976 peptidyl-prolyl cis-trans isomerase A-like X 10625422 10629924 - 116888976 MODEL JAAIVD010000014 pseudo 626053110 LOC116887397 olfactory receptor 2H2-like 18 10959585 10960526 - 22301074 116887397 MODEL JAAIVD010000013;XM_032888990 XP_032744881 protein-coding 626053113 LOC116897073 60S ribosomal protein L7a-like 3 156342553 156343284 - 116897073 MODEL JAAIVD010000012;XM_032898699 XP_032754590 protein-coding 626053116 Rybp RING1 and YY1 binding protein ENCODES a protein that exhibits DNA binding (ortholog); nucleic acid binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 6 46720715 46771650 + 30032202 116903463 MODEL JAAIVD010000024;XM_032906016 XP_032761907 RING1 and YY1-binding protein protein-coding 626053125 LOC116905731 heat shock protein HSP 90-beta-like 7 78541469 78544056 + 116905731 MODEL JAAIVD010000026 pseudo 626053126 Prss57 serine protease 57 ENCODES a protein that exhibits heparin binding (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); long QT syndrome (ortholog); FOUND IN azurophil granule lumen (ortholog); extracellular space (ortholog) 1 155084704 155089845 + 22301074 116889867 MODEL JAAIVD010000025;XM_032890692;XM_032890694 XP_032746583;XP_032746585 protein-coding 626053136 Drd2 dopamine receptor D2 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); INVOLVED IN acid secretion (ortholog); activation of protein kinase activity (ortholog); adenohypophysis development (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; excitatory synaptic transmission pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); axon terminus (ortholog) 8 43831250 43895985 + 22301074;2480527;30032202 116907472 MODEL JAAIVD010000027;X17458;XM_032910458;XM_032910459 XP_032766349;XP_032766350 D(2) dopamine receptor protein-coding 626053151 Ccdc146 coiled-coil domain containing 146 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell population proliferation (ortholog); cilium organization (ortholog); ASSOCIATED WITH male infertility (ortholog); spermatogenic failure 94 (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); centrosome (ortholog) 6 150565190 150708329 - 30032202 116904171 MODEL JAAIVD010000024;XM_032907072 XP_032762963 coiled-coil domain-containing protein 146 protein-coding 626053174 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60903455 60903526 + 116897668 MODEL JAAIVD010000012 trna 626053175 LOC116899411 derlin-1-like 4 132812147 132812928 - 30032202 116899411 MODEL JAAIVD010000003;XM_032901147 XP_032757038 protein-coding 626053179 Disc1 DISC1 scaffold protein ENCODES a protein that exhibits identical protein binding (ortholog); kinesin binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); Asperger syndrome (ortholog); autistic disorder (ortholog); FOUND IN axon (ortholog); cell body (ortholog); central region of growth cone (ortholog) 17 44564262 44767939 + 30032202 116886473 MODEL JAAIVD010000011;XM_032887977 XP_032743868 disrupted in schizophrenia 1 protein protein-coding 626053196 Lep leptin ENCODES a protein that exhibits DNA binding (ortholog); hormone activity (ortholog); leptin receptor binding (ortholog); INVOLVED IN activation of protein kinase C activity (ortholog); adipose tissue development (ortholog); adult feeding behavior (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered leptin system pathway; energy homeostasis pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); abdominal obesity-metabolic syndrome 1 (ortholog); acute pancreatitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 6 110485308 110499224 - 22301074;30032202 116902918 MODEL JAAIVD010000024;XM_032905243 XP_032761134 protein-coding 626053203 Vsnl1 visinin like 1 INVOLVED IN negative regulation of insulin secretion (ortholog); positive regulation of exocytosis (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 7 31309916 31421181 - 22301074;30032202 116904881 MODEL JAAIVD010000026;XM_032907481 XP_032763372 visinin-like protein 1 protein-coding 626053211 LOC116908927 keratin-associated protein 1-3-like 9 54423755 54424291 - 22301074;30032202 116908927 MODEL JAAIVD010000002;XM_032912387 XP_032768278 protein-coding 626053214 LOC116900090 odorant-binding protein 2a-like 5 11365038 11368110 - 30032202 116900090 MODEL JAAIVD010000023;XM_032901870 XP_032757761 protein-coding 626053225 Ddx4 DEAD-box helicase 4 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); male meiosis I (ortholog); male meiotic nuclear division (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 184132822 184438014 + 22301074;30032202 116897191 MODEL JAAIVD010000012;XM_032898886;XM_032898887;XM_032898888;XM_032898889;XM_032898890;XM_032898891 XP_032754777;XP_032754778;XP_032754779;XP_032754780;XP_032754781;XP_032754782 probable ATP-dependent RNA helicase DDX4 protein-coding 626053264 LOC116899748 U6 spliceosomal RNA 4 169767863 169767969 - 116899748 MODEL JAAIVD010000003;XR_004387763 snrna 626053267 LOC116883971 immunoglobulin kappa variable 1-9-like 14 25623165 25623764 - 116883971 MODEL JAAIVD010000009 pseudo 626053268 LOC116883605 homeobox protein engrailed-1-like 14 64932546 64940293 - 116883605 MODEL JAAIVD010000009;XM_032884790 XP_032740681 protein-coding 626053274 Serf2 small EDRK-rich factor 2 INVOLVED IN protein destabilization (ortholog) 5 99605779 99607523 + 116901865 MODEL JAAIVD010000023;XM_032904062;XM_032904063 XP_032759953;XP_032759954 protein-coding 626053286 LOC116912683 glyceraldehyde-3-phosphate dehydrogenase-like 11 83713133 83714121 + 116912683 MODEL JAAIVD010000006 pseudo 626053287 LOC116902856 olfactory receptor 2A12 6 97538925 97539857 - 22301074 116902856 MODEL JAAIVD010000024;XM_032905184 XP_032761075 protein-coding 626053290 LOC116890024 lysozyme C-like 1 195380223 195384450 - 22301074;30032202 116890024 MODEL JAAIVD010000025;XM_032890803 XP_032746694 protein-coding 626053296 LOC116883195 cofilin-1-like 14 38143085 38143707 + 116883195 MODEL JAAIVD010000009 pseudo 626053297 Chsy3 chondroitin sulfate synthase 3 ENCODES a protein that exhibits glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 15 72429230 72674408 - 22301074;30032202 116885007 MODEL JAAIVD010000010;XM_032886245 XP_032742136 protein-coding 626053304 Lsm12 LSM12 homolog FOUND IN cytoplasm (ortholog) 9 61458645 61479962 - 22301074 116909030 MODEL JAAIVD010000002;XM_032912509 XP_032768400 protein LSM12 homolog protein-coding 626053313 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56397492 56397563 + 116910806 MODEL JAAIVD010000002 trna 626053314 Fhdc1 FH2 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); microtubule binding (ortholog); INVOLVED IN cilium assembly (ortholog); Golgi ribbon formation (ortholog); stress fiber assembly (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); Golgi apparatus (ortholog) 3 69115056 69152446 + 30032202 116896737 MODEL JAAIVD010000012;XM_032898165;XM_032898166 XP_032754056;XP_032754057 FH2 domain-containing protein 1 protein-coding 626053333 LOC116910373 elongin-B-like 9 81857542 81857958 - 22301074;30032202 116910373 MODEL JAAIVD010000002;XM_032914220 XP_032770111 protein-coding 626053336 LOC116906985 uncharacterized LOC116906985 8 50893968 50897499 - 116906985 MODEL JAAIVD010000027;XR_004388792;XR_004388793 ncrna 626053343 Wdr59 WD repeat domain 59 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); positive regulation of TORC1 signaling (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytosol (ortholog); GATOR2 complex (ortholog); lysosomal membrane (ortholog) 17 31143841 31210508 - 22301074 116886152 MODEL JAAIVD010000011;XM_032887512;XM_032887513;XM_032887514;XM_032887515;XM_032887516;XM_032887517 XP_032743403;XP_032743404;XP_032743405;XP_032743406;XP_032743407;XP_032743408 GATOR complex protein WDR59 protein-coding 626053389 LOC116902205 60S ribosomal protein L6-like 1 127622089 127625752 + 116902205 MODEL JAAIVD010000025 pseudo 626053390 LOC116886871 male-specific lethal 3 homolog 18 32922591 32930811 + 30032202 116886871 MODEL JAAIVD010000013;XM_032888329 XP_032744220 protein-coding 626053397 LOC116893524 60S ribosomal protein L13a-like 2 196876690 196877269 - 116893524 MODEL JAAIVD010000001 pseudo 626053398 Glud1 glutamate dehydrogenase 1 ENCODES a protein that exhibits ADP binding (ortholog); enzyme binding (ortholog); glutamate dehydrogenase (NAD+) activity (ortholog); INVOLVED IN cerebellum development (ortholog); glutamate biosynthetic process (ortholog); glutamine metabolic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; AGAT deficiency pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); Canavan disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); mitochondrial matrix (ortholog) 13 10083001 10115660 + 30032202 116914840 MODEL JAAIVD010000008;XM_032919294 XP_032775185 glutamate dehydrogenase 1, mitochondrial protein-coding 626053415 LOC116902871 olfactory receptor-like protein OLF3 6 98406180 98407130 + 22301074 116902871 MODEL JAAIVD010000024;XM_032905202 XP_032761093 protein-coding 626053418 Tet1 tet methylcytosine dioxygenase 1 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); DNA binding (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); chromatin remodeling (ortholog); dendrite morphogenesis (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 18 23815875 23883755 + 22301074;30032202 116886875 MODEL JAAIVD010000013;XM_032888331 XP_032744222 methylcytosine dioxygenase TET1 protein-coding 626053434 LOC116894621 centromere protein J-like 2 186635630 186659027 - 30032202 116894621 MODEL JAAIVD010000001;XM_032896335;XM_032896336;XM_032896337 XP_032752226;XP_032752227;XP_032752228 T-complex protein 10A homolog 2-like protein-coding 626053457 Rab5b RAB5B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP-dependent protein binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Pulmonary Surfactant Metabolism Dysfunction 1 (ortholog); FOUND IN endocytic vesicle (ortholog); endosome (ortholog); extracellular exosome (ortholog) 1 156155015 156172885 - 22301074 116906305 MODEL JAAIVD010000025;XM_032909210;XM_032909211;XM_032909212;XM_032909213 XP_032765101;XP_032765102;XP_032765103;XP_032765104 ras-related protein Rab-5B protein-coding 626053477 Tmem74 transmembrane protein 74 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN general adaptation syndrome, behavioral process (ortholog); macroautophagy (ortholog); FOUND IN plasma membrane (ortholog) 1 218265317 218268785 - 116911145 MODEL JAAIVD010000025;XM_032915002 XP_032770893 protein-coding 626053483 Smim31 small integral membrane protein 31 13 24019573 24047344 + 116914846 MODEL JAAIVD010000008;XM_032919299 XP_032775190 protein-coding 626053490 LOC116897018 cytochrome P450 2C42-like 3 141243640 141311732 - 22301074;30032202 116897018 MODEL JAAIVD010000012;XM_032898625 XP_032754516 protein-coding 626053503 LOC116899409 uncharacterized LOC116899409 4 132840509 132875426 - 116899409 MODEL JAAIVD010000003;XM_032901145;XM_032901146 XP_032757036;XP_032757037 uncharacterized protein LOC116899409 protein-coding 626053515 C4H3orf85 chromosome 4 C3orf85 homolog 4 32955900 32967635 - 116897897 MODEL JAAIVD010000003;XM_032899302 XP_032755193 uncharacterized protein C3orf85 homolog protein-coding 626053523 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 18 23274129 23274210 + 116887796 MODEL JAAIVD010000013 trna 626053524 LOC116888178 H/ACA ribonucleoprotein complex subunit DKC1-like 1 73509500 73511094 + 116888178 MODEL JAAIVD010000025 pseudo 626053525 LOC116910277 U1 small nuclear ribonucleoprotein C-like 9 38741137 38741695 - 116910277 MODEL JAAIVD010000002 pseudo 626053526 LOC116886955 membrane cofactor protein-like 18 31572660 31573661 - 22301074;30032202 116886955 MODEL JAAIVD010000013;XM_032888454 XP_032744345 protein-coding 626053529 LOC116897601 small nucleolar RNA SNORA17 3 192118569 192118690 + 116897601 MODEL JAAIVD010000012 pseudo 626053530 LOC116887152 gametogenetin-binding protein 1 18 6773061 6779426 - 116887152 MODEL JAAIVD010000013;XM_032888701 XP_032744592 protein-coding 626053540 LOC116914698 synaptotagmin-15 13 9979406 9987422 + 30032202 116914698 MODEL JAAIVD010000008;XM_032919120 XP_032775011 protein-coding 626053552 Znf112 zinc finger protein 112 2 170586704 170601881 - 30032202 116892499 MODEL JAAIVD010000001;XM_032894246 XP_032750137 protein-coding 626053562 LOC116913503 mast cell protease 4-like 12 69050565 69053134 - 116913503 MODEL JAAIVD010000007 pseudo 626053563 Ppara peroxisome proliferator activated receptor alpha ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); cellular response to fructose stimulus (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); acute kidney tubular necrosis (ortholog); alcohol use disorder (ortholog); FOUND IN nucleus (ortholog) 1 255087375 255151125 + 22301074;30032202 116914657 MODEL JAAIVD010000025;XM_032919060;XM_032919067;XM_032919076;XM_032919083;XM_032919092;XM_032919101 XP_032774951;XP_032774958;XP_032774967;XP_032774974;XP_032774983;XP_032774992 peroxisome proliferator-activated receptor alpha protein-coding 626053588 Glcci1 glucocorticoid induced 1 FOUND IN cytoplasm (ortholog) 6 129816197 129883811 - 30032202 116904079 MODEL JAAIVD010000024;XM_032906945 XP_032762836 glucocorticoid-induced transcript 1 protein protein-coding 626053600 Nell2 neural EGFL like 2 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN commissural neuron axon guidance (ortholog); development of secondary female sexual characteristics (ortholog); fertilization (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); extracellular region (ortholog) 1 268066201 268373208 - 22301074 116884350 MODEL JAAIVD010000025;XM_032885482 XP_032741373 protein kinase C-binding protein NELL2 protein-coding 626053625 Fbp2 fructose-bisphosphatase 2 ENCODES a protein that exhibits fructose 1,6-bisphosphate 1-phosphatase activity (ortholog); identical protein binding (ortholog); INVOLVED IN gluconeogenesis (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Childhood-Onset Remitting Leukodystrophy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 14 76642964 76660403 + 22301074;30032202 116883790 MODEL JAAIVD010000009;XM_032885034 XP_032740925 fructose-1,6-bisphosphatase isozyme 2 protein-coding 626053636 LOC116895588 eukaryotic translation initiation factor 1A-like 3 145004974 145005416 - 116895588 MODEL JAAIVD010000012 pseudo 626053637 Vps28 VPS28 subunit of ESCRT-I ENCODES a protein that exhibits ubiquitin binding (ortholog); INVOLVED IN negative regulation of protein ubiquitination (ortholog); positive regulation of protein catabolic process (ortholog); positive regulation of ubiquitin-dependent endocytosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 1 248949779 248953645 - 22301074;30032202 116913304 MODEL JAAIVD010000025;XM_032917442 XP_032773333 vacuolar protein sorting-associated protein 28 homolog protein-coding 626053651 LOC116898351 40S ribosomal protein S7-like 4 53089529 53090121 - 116898351 MODEL JAAIVD010000003 pseudo 626053652 Rbm22 RNA binding motif protein 22 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); pre-mRNA binding (ortholog); U6 snRNA binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); mRNA cis splicing, via spliceosome (ortholog); positive regulation of protein export from nucleus (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 15 71374624 71386091 - 22301074;30032202 116884610 MODEL JAAIVD010000010;XM_032885751 XP_032741642 pre-mRNA-splicing factor RBM22 protein-coding 626053667 KEG97_t01 tRNA-Phe MT 1 69 + 64988258 trna 626053668 Dap3 death associated protein 3 ENCODES a protein that exhibits GTPase activity (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); mitochondrial translation (ortholog); PARTICIPATES IN Trail mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Perrault Syndrome 1 (ortholog); Perrault syndrome 7 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 3 64737250 64756451 + 22301074;30032202 116895801 MODEL JAAIVD010000012;XM_032896941 XP_032752832 28S ribosomal protein S29, mitochondrial protein-coding 626053683 Cnnm1 cyclin and CBS domain divalent metal cation transport mediator 1 ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); melanoma (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 2 42946649 43005207 + 30032202 116891192 MODEL JAAIVD010000001;XM_032892012;XM_032892013;XM_032892014 XP_032747903;XP_032747904;XP_032747905 metal transporter CNNM1 protein-coding 626053703 Garin5b golgi associated RAB2 interactor family member 5B INVOLVED IN spermatid development (ortholog) 2 177329183 177346727 - 30032202 116894542 MODEL JAAIVD010000001;XM_032896251 XP_032752142 Fam71e2 family with sequence similarity 71 member E2;protein FAM71E2 protein-coding 626053716 Hadh hydroxyacyl-CoA dehydrogenase ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); identical protein binding (ortholog); NAD+ binding (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); negative regulation of insulin secretion (ortholog); positive regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; butanoate metabolic pathway; ASSOCIATED WITH 3-Hydroxyacyl-CoA Dehydrogenase Deficiency (ortholog); Congenital Hyperinsulinism (ortholog); diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 3 27599367 27641703 + 22301074;30032202 116896243 MODEL JAAIVD010000012;XM_032897309 XP_032753200 hydroxyacyl-coenzyme A dehydrogenase, mitochondrial protein-coding 626053728 LOC116890611 U6atac minor spliceosomal RNA 1 96764987 96765109 - 116890611 MODEL JAAIVD010000025;XR_004386762 snrna 626053731 Insig1 insulin induced gene 1 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to sterol (ortholog); cholesterol biosynthetic process (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) 6 156874338 156882862 + 30032202 116904233 MODEL JAAIVD010000024;XM_032907176;XM_032907177 XP_032763067;XP_032763068 insulin-induced gene 1 protein protein-coding 626053744 LOC116905819 protein SEC13 homolog 7 74801548 74802477 - 116905819 MODEL JAAIVD010000026 pseudo 626053745 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 120786553 120786625 - 116895147 MODEL JAAIVD010000001 trna 626053746 Emsy EMSY transcriptional repressor, BRCA2 interacting ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Breast Neoplasms (ortholog); Familial Prostate Cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 96860850 96929024 - 30032202 116891715 MODEL JAAIVD010000001;XM_032892993;XM_032892994;XM_032892995;XM_032892996;XM_032892998;XM_032892999;XM_032893000;XM_032893001;XM_032893002;XM_032893003;XM_032893004 XP_032748884;XP_032748885;XP_032748886;XP_032748887;XP_032748889;XP_032748890;XP_032748891;XP_032748892;XP_032748893;XP_032748894;XP_032748895 BRCA2-interacting transcriptional repressor EMSY protein-coding 626053786 Gpr39 G protein-coupled receptor 39 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adult feeding behavior (ortholog); cellular response to zinc ion (ortholog); cholesterol homeostasis (ortholog) 10 9557328 9751856 + 22301074 116911128 MODEL JAAIVD010000005;XM_032914976 XP_032770867 G-protein coupled receptor 39 protein-coding 626053792 LOC116886611 lon protease homolog 2, peroxisomal 17 13127061 13171094 - 22301074;30032202 116886611 MODEL JAAIVD010000011;XM_032888121 XP_032744012 protein-coding 626053800 Csnk1g1 casein kinase 1 gamma 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN protein autophosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; p53 signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog) 8 60230927 60367943 + 22301074;30032202 116907570 MODEL JAAIVD010000027;XM_032910594;XM_032910595;XM_032910596;XM_032910598;XM_032910599;XM_032910600;XM_032910601;XM_032910602 XP_032766485;XP_032766486;XP_032766487;XP_032766489;XP_032766490;XP_032766491;XP_032766492;XP_032766493 casein kinase I protein-coding 626053832 Atp9a ATPase phospholipid transporting 9A (putative) ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of exosomal secretion (ortholog); neuron projection morphogenesis (ortholog); regulation of endocytic recycling (ortholog); ASSOCIATED WITH genetic disease (ortholog); neurodevelopmental disorder with poor growth and behavioral abnormalities (ortholog); specific developmental disorder (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); late endosome (ortholog) 5 149256302 149361914 + 22301074;30032202 116902297 MODEL JAAIVD010000023;XM_032904735 XP_032760626 probable phospholipid-transporting ATPase IIA protein-coding 626053864 LOC116909067 prohibitin-like 9 88890040 88891170 + 22301074;30032202 116909067 MODEL JAAIVD010000002;XM_032912545 XP_032768436 protein-coding 626053869 LOC116903588 cytochrome P450 26B1 ENCODES a protein that exhibits oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); retinoic acid 4-hydroxylase activity (ortholog); retinoic acid binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); cell fate determination (ortholog); cellular response to retinoic acid (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog) 6 61661983 61679216 + 22301074;30032202 116903588 MODEL JAAIVD010000024;XM_032906211 XP_032762102 protein-coding 626053879 Alx1 ALX homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic limb morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH anencephaly (ortholog); Craniofacial Abnormalities (ortholog); frontonasal dysplasia (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 181394834 181415082 - 30032202 116890003 MODEL JAAIVD010000025;XM_032890789 XP_032746680 ALX homeobox protein 1 protein-coding 626053887 Itpka inositol-trisphosphate 3-kinase A ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); inositol-1,4,5-trisphosphate 3-kinase activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to calcium ion (ortholog); dendritic spine maintenance (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN cytoskeleton (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 5 97910432 97919038 + 22301074;30032202 116901819 MODEL JAAIVD010000023;XM_032903977 XP_032759868 protein-coding 626053898 Fgd2 FYVE, RhoGEF and PH domain containing 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); ovarian cyst (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); nucleus (ortholog) 18 4493490 4509767 - 22301074;30032202 116887049 MODEL JAAIVD010000013;XM_032888540 XP_032744431 FYVE, RhoGEF and PH domain-containing protein 2 protein-coding 626053918 LOC116902491 U6 spliceosomal RNA 5 51141802 51141912 - 116902491 MODEL JAAIVD010000023;XR_004388106 snrna 626053921 LOC116889489 small nucleolar RNA SNORA48 X 93951625 93951767 + 116889489 MODEL JAAIVD010000014;XR_004386440 snorna 626053924 Ca3 carbonic anhydrase 3 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); nickel cation binding (ortholog); phosphatase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); cellular response to leptin stimulus (ortholog); ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); Binge Drinking (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); sarcomere (ortholog) 3 157388752 157398163 - 22301074;30032202 116897078 MODEL JAAIVD010000012;XM_032898703 XP_032754594 protein-coding 626053936 LOC116914845 uncharacterized LOC116914845 13 23309754 23604595 - 116914845 MODEL JAAIVD010000008;XR_004389779 ncrna 626053941 LOC116902888 CD99 antigen-like protein 2 1 132149808 132166654 + 116902888 MODEL JAAIVD010000025;XM_032905246 XP_032761137 protein-coding 626053952 LOC116888096 multifunctional protein ADE2-like X 97135494 97143338 - 22301074 116888096 MODEL JAAIVD010000014;XM_032889461 XP_032745352 protein-coding 626053958 LOC116897978 uncharacterized LOC116897978 4 22218548 22367517 - 30032202 116897978 MODEL JAAIVD010000003;XM_032899380 XP_032755271 uncharacterized protein LOC116897978 protein-coding 626053973 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41424885 41424956 + 116884196 MODEL JAAIVD010000009 trna 626053974 LOC116912323 uncharacterized LOC116912323 1 241586551 241598767 + 116912323 MODEL JAAIVD010000025;XR_004389445 ncrna 626053979 LOC116889207 proteasome subunit alpha type-2-like X 4923181 4923882 - 116889207 MODEL JAAIVD010000014 pseudo 626053980 LOC116897137 60S ribosomal protein L23-like 3 172068237 172070020 + 116897137 MODEL JAAIVD010000012 pseudo 626053981 Setd1b SET domain containing 1B, histone lysine methyltransferase ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); histone methyltransferase complex (ortholog); nucleoplasm (ortholog) 16 30654272 30680087 - 22301074;30032202 116885169 MODEL JAAIVD010000004;XM_032886384 XP_032742275 histone-lysine N-methyltransferase SETD1B protein-coding 626054002 Dock8 dedicator of cytokinesis 8 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to chemokine (ortholog); dendritic cell migration (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); autosomal dominant intellectual developmental disorder 2 (ortholog); bacterial infectious disease (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 25116904 25306570 + 30032202 116891053 MODEL JAAIVD010000001;XM_032891748 XP_032747639 dedicator of cytokinesis protein 8 protein-coding 626054054 LOC116889565 U4 spliceosomal RNA X 123827206 123827365 + 116889565 MODEL JAAIVD010000014 pseudo 626054055 LOC116903638 60 kDa heat shock protein, mitochondrial-like 6 126245836 126256451 - 116903638 MODEL JAAIVD010000024 pseudo 626054056 LOC116883509 WD repeat-containing protein 20-like 14 8186893 8188550 + 116883509 MODEL JAAIVD010000009 pseudo 626054057 Trpm3 transient receptor potential cation channel subfamily M member 3 ENCODES a protein that exhibits calcium channel activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autosomal dominant intellectual developmental disorder (ortholog); Birk-Barel syndrome (ortholog); FOUND IN plasma membrane (ortholog) 2 22210198 23061549 + 22301074;30032202 116891035 MODEL JAAIVD010000001;XM_032891718 XP_032747609 protein-coding 626054086 Prrg3 proline rich and Gla domain 3 13 248458 251374 - 22301074;30032202 116915025 MODEL JAAIVD010000008;XM_032919432;XM_032919434 XP_032775323;XP_032775325 transmembrane gamma-carboxyglutamic acid protein 3 protein-coding 626054095 Znf24 zinc finger protein 24 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN myelination (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 19816677 19825714 + 30032202 116884664 MODEL JAAIVD010000010;XM_032885834;XM_032885835 XP_032741725;XP_032741726 protein-coding 626054106 LOC116902847 60S ribosomal protein L7a-like 6 93430950 93431755 + 116902847 MODEL JAAIVD010000024 pseudo 626054107 LOC116893392 Y-box-binding protein 1-like 2 169973057 169975662 + 116893392 MODEL JAAIVD010000001 pseudo 626054108 LOC116908545 glyceraldehyde-3-phosphate dehydrogenase-like 9 87532333 87533326 - 116908545 MODEL JAAIVD010000002 pseudo 626054109 Ube3d ubiquitin protein ligase E3D ENCODES a protein that exhibits cyclin binding (ortholog); ribonuclease inhibitor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); protein monoubiquitination (ortholog); protein polyubiquitination (ortholog); FOUND IN cytosol (ortholog); ubiquitin ligase complex (ortholog) 8 80446388 80495777 - 30032202 116907853 MODEL JAAIVD010000027;XM_032911043 XP_032766934 E3 ubiquitin-protein ligase E3D protein-coding 626054121 LOC116888818 gem-associated protein 8-like 1 103569256 103569934 + 116888818 MODEL JAAIVD010000025 pseudo 626054122 Khk ketohexokinase ENCODES a protein that exhibits ATP binding (ortholog); fructose binding (ortholog); identical protein binding (ortholog); INVOLVED IN fructose catabolic process (ortholog); fructose catabolic process to hydroxyacetone phosphate and glyceraldehyde-3-phosphate (ortholog); fructose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); essential fructosuria (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 23151921 23161786 - 22301074 116905993 MODEL JAAIVD010000026;XM_032909022;XM_032909023;XM_032909024;XM_032909025 XP_032764913;XP_032764914;XP_032764915;XP_032764916 protein-coding 626054140 LOC116906132 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 7 87090885 87093485 + 116906132 MODEL JAAIVD010000026 pseudo 626054141 LOC116912001 heterogeneous nuclear ribonucleoproteins A2/B1-like 11 50611573 50612242 - 116912001 MODEL JAAIVD010000006 pseudo 626054142 Plekhg2 pleckstrin homology and RhoGEF domain containing G2 INVOLVED IN regulation of actin filament polymerization (ortholog); ASSOCIATED WITH LEUKODYSTROPHY AND ACQUIRED MICROCEPHALY WITH OR WITHOUT DYSTONIA (ortholog); microcephaly (ortholog); Neurodevelopmental Disorders (ortholog) 2 167621723 167634360 + 22301074 116892395 MODEL JAAIVD010000001;XM_032894067 XP_032749958 pleckstrin homology domain-containing family G member 2 protein-coding 626054164 Snap91 synaptosome associated protein 91 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); clathrin adaptor activity (ortholog); clathrin binding (ortholog); INVOLVED IN axonogenesis (ortholog); chemical synaptic transmission (ortholog); clathrin coat assembly (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Alzheimer's disease (ortholog); middle cerebral artery infarction (ortholog); FOUND IN axon terminus (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog) 8 80822835 80929370 - 22301074;30032202 116906833 MODEL JAAIVD010000027;XM_032909717;XM_032909718;XM_032909719 XP_032765608;XP_032765609;XP_032765610 clathrin coat assembly protein AP180 protein-coding 626054205 Gclm glutamate-cysteine ligase modifier subunit ENCODES a protein that exhibits glutamate-cysteine ligase activity (ortholog); glutamate-cysteine ligase catalytic subunit binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); blood vessel diameter maintenance (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; cysteine metabolic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH berylliosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Liver Injury (ortholog); FOUND IN glutamate-cysteine ligase complex (ortholog) 3 37577682 37600806 - 30032202 116896300 MODEL JAAIVD010000012;XM_032897387 XP_032753278 glutamate--cysteine ligase regulatory subunit protein-coding 626054216 Pafah2 platelet activating factor acetylhydrolase 2 ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); platelet-activating factor acetyltransferase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog) 1 23826696 23850900 - 22301074;30032202 116894770 MODEL JAAIVD010000025;XM_032896428 XP_032752319 platelet-activating factor acetylhydrolase 2, cytoplasmic protein-coding 626054230 LOC116907165 60S ribosomal protein L30-like 8 105194924 105195491 + 116907165 MODEL JAAIVD010000027 pseudo 626054231 Lypla1 lysophospholipase 1 ENCODES a protein that exhibits lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN aggrephagy (ortholog); fatty acid transport (ortholog); negative regulation of aggrephagy (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 140181938 140210689 + 30032202 116903704 MODEL JAAIVD010000025;XM_032906381 XP_032762272 acyl-protein thioesterase 1 protein-coding 626054244 Rdh12 retinol dehydrogenase 12 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN cellular detoxification of aldehyde (ortholog); retinol metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); Leber congenital amaurosis 13 (ortholog); FOUND IN photoreceptor inner segment (ortholog) 7 93314552 93326856 + 116905793 MODEL JAAIVD010000026;XM_032908769 XP_032764660 protein-coding 626054255 Fez2 fasciculation and elongation protein zeta 2 INVOLVED IN negative regulation of autophagosome assembly (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); Weight Gain (ortholog) 7 14802412 14842263 + 30032202 116905905 MODEL JAAIVD010000026;XM_032908895 XP_032764786 fasciculation and elongation protein zeta-2 protein-coding 626054268 Evi5l ecotropic viral integration site 5 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of cilium assembly (ortholog); positive regulation of GTPase activity (ortholog) 16 2300356 2338460 + 116885196 MODEL JAAIVD010000004;XM_032886416;XM_032886417;XM_032886418;XM_032886419 XP_032742307;XP_032742308;XP_032742309;XP_032742310 EVI5-like protein protein-coding 626054298 LOC116909463 transmembrane protein 69-like 1 198942254 198944166 + 116909463 MODEL JAAIVD010000025;XM_032913052 XP_032768943 protein-coding 626054303 LOC116905449 cholesterol 24-hydroxylase ENCODES a protein that exhibits cholesterol 24-hydroxylase activity (ortholog); heme binding (ortholog); steroid hydroxylase activity (ortholog); INVOLVED IN cholesterol catabolic process (ortholog); progesterone metabolic process (ortholog); protein localization to membrane raft (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum membrane (ortholog); postsynapse (ortholog) 7 126008920 126035627 + 22301074;30032202 116905449 MODEL JAAIVD010000026;XM_032908399 XP_032764290 protein-coding 626054322 Fads3 fatty acid desaturase 3 INVOLVED IN gene expression (ortholog); unsaturated fatty acid biosynthetic process (ortholog) 2 9517983 9536811 + 22301074;30032202 116890941 MODEL JAAIVD010000001;XM_032891583 XP_032747474 protein-coding 626054338 LOC116889604 zinc finger Y-chromosomal protein 2-like Y 1631198 1648616 + 22301074;30032202 116889604 MODEL JAAIVD010000015;XM_032890535 XP_032746426 protein-coding 626054348 LOC116915226 ubiquitin 14 68557772 68558030 + 30032202 116915226 MODEL JAAIVD010000009;XM_032919614 XP_032775505 protein-coding 626054353 Hmgcll1 3-hydroxy-3-methylglutaryl-CoA lyase like 1 ENCODES a protein that exhibits hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN ketone body biosynthetic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 8 70275878 70395893 + 30032202 116906602 MODEL JAAIVD010000027;XM_032909351;XM_032909353 XP_032765242;XP_032765244 3-hydroxymethyl-3-methylglutaryl-CoA lyase L1;3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1;3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic protein-coding 626054369 LOC116914660 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1-like 13 47822018 47823538 + 22301074;30032202 116914660 MODEL JAAIVD010000008;XM_032919062 XP_032774953 protein-coding 626054374 LOC116889635 Y-linked testis-specific protein 1-like 116889635 MODEL JAAIVD010000019 pseudo 626054375 Tmem41b transmembrane protein 41B ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); intracellular lipid transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog) 2 91474816 91489754 + 30032202 116891667 MODEL JAAIVD010000001;XM_032892921;XM_032892922 XP_032748812;XP_032748813 protein-coding 626054392 LOC116895040 small nucleolar RNA SNORA17 2 47974651 47974781 - 116895040 MODEL JAAIVD010000001;XR_004387226 snorna 626054395 LOC116885860 chromobox protein homolog 3-like 16 6610045 6630429 + 116885860 MODEL JAAIVD010000004 pseudo 626054396 LOC116886583 aldo-keto reductase family 1 member B1-like 17 1681587 1684757 + 116886583 MODEL JAAIVD010000011 pseudo 626054397 Rgs6 regulator of G protein signaling 6 ENCODES a protein that exhibits GTPase activator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); positive regulation of neuron differentiation (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); morphine dependence (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleolus (ortholog) 7 96756587 97266112 + 22301074;30032202 116905244 MODEL JAAIVD010000026;XM_032908075;XM_032908076;XM_032908077;XM_032908078;XM_032908079;XM_032908080;XM_032908082;XM_032908083;XM_032908084;XM_032908085 XP_032763966;XP_032763967;XP_032763968;XP_032763969;XP_032763970;XP_032763971;XP_032763973;XP_032763974;XP_032763975;XP_032763976 regulator of G-protein signaling 6 protein-coding 626054442 LOC116908859 10 kDa heat shock protein, mitochondrial 9 36148744 36149234 - 22301074;30032202 116908859 MODEL JAAIVD010000002;XM_032912299 XP_032768190 protein-coding 626054447 Rfng RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); positive regulation of Notch signaling pathway (ortholog); regulation of Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Weight Gain (ortholog) 9 63248651 63251799 + 22301074;30032202 116909859 MODEL JAAIVD010000002;XM_032913586 XP_032769477 beta-1,3-N-acetylglucosaminyltransferase radical fringe protein-coding 626054459 Insr insulin receptor ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase binding (ortholog); amyloid-beta binding (ortholog); ATP binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta clearance (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN altered insulin signaling pathway; altered leptin system pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); FOUND IN caveola (ortholog); cell body (ortholog); dendrite (ortholog) 16 1060772 1201562 - 22301074;30032202 116885924 MODEL JAAIVD010000004;XM_032887232;XM_032887233;XM_032887234 XP_032743123;XP_032743124;XP_032743125 protein-coding 626054488 Pgam1 phosphoglycerate mutase 1 ENCODES a protein that exhibits bisphosphoglycerate mutase activity (ortholog); phosphoglycerate mutase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 41025433 41032593 + 22301074;30032202 116891166 MODEL JAAIVD010000001;XM_032891969 XP_032747860 protein-coding 626054496 LOC116908166 non-histone chromosomal protein HMG-17-like 8 45222140 45222729 - 116908166 MODEL JAAIVD010000027 pseudo 626054497 Odad4 outer dynein arm docking complex subunit 4 INVOLVED IN brain development (ortholog); cerebrospinal fluid circulation (ortholog); cilium movement (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 35 (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axoneme (ortholog) 9 59844254 59874146 + 22301074;30032202 116910564 MODEL JAAIVD010000002;XM_032914476;XM_032914477 XP_032770367;XP_032770368 Ttc25 tetratricopeptide repeat domain 25;tetratricopeptide repeat protein 25 protein-coding 626054518 LOC116891409 protein FAM24A-like 2 70512094 70513440 + 116891409 MODEL JAAIVD010000001;XM_032892436 XP_032748327 protein-coding 626054524 LOC116898114 proteasome activator complex subunit 1-like 4 102255426 102256646 - 116898114 MODEL JAAIVD010000003 pseudo 626054525 Ptpn4 protein tyrosine phosphatase non-receptor type 4 ENCODES a protein that exhibits glutamate receptor binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); membrane (ortholog) 10 12234802 12409913 - 22301074;30032202 116911295 MODEL JAAIVD010000005;XM_032915202;XM_032915203;XM_032915204;XM_032915205;XM_032915206 XP_032771093;XP_032771094;XP_032771095;XP_032771096;XP_032771097 tyrosine-protein phosphatase non-receptor type 4 protein-coding 626054563 Dido1 death inducer-obliterator 1 INVOLVED IN apoptotic signaling pathway (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); myelodysplastic/myeloproliferative neoplasm (ortholog); FOUND IN nucleus (ortholog) 5 157759579 157791581 - 22301074;30032202 116902418 MODEL JAAIVD010000023;XM_032904948 XP_032760839 death-inducer obliterator 1 protein-coding 626054581 LOC116913791 60S ribosomal protein L27-like 12 26208386 26208798 + 116913791 MODEL JAAIVD010000007 pseudo 626054582 LOC116886925 cadherin-23-like 18 26125787 26128286 - 116886925 MODEL JAAIVD010000013;XM_032888404;XM_032888405 XP_032744295;XP_032744296 protein-coding 626054590 LOC116898507 ATP synthase F(0) complex subunit C2, mitochondrial-like 4 132367813 132368342 + 22301074;30032202 116898507 MODEL JAAIVD010000003;XM_032899738 XP_032755629 protein-coding 626054594 LOC116893955 uncharacterized LOC116893955 2 96970996 96978215 - 116893955 MODEL JAAIVD010000001;XR_004387017 ncrna 626054598 LOC116884800 E3 ubiquitin-protein ligase RNF149-like 1 211916868 211927747 - 116884800 MODEL JAAIVD010000025 pseudo 626054599 LOC116891068 uncharacterized LOC116891068 2 28885677 28895940 - 116891068 MODEL JAAIVD010000001;XR_004386809 ncrna 626054604 Marchf6 membrane associated ring-CH-type finger 6 ENCODES a protein that exhibits enzyme binding (ortholog); ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of cholesterol biosynthetic process (ortholog); proteasomal protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH familial adult myoclonic epilepsy 3 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 3 149285354 149356226 + 22301074;30032202 116897049 MODEL JAAIVD010000012;XM_032898672;XM_032898673 XP_032754563;XP_032754564 E3 ubiquitin-protein ligase MARCH6 protein-coding 626054638 LOC116900350 olfactory receptor 5W2-like 5 69045564 69046499 + 22301074;30032202 116900350 MODEL JAAIVD010000023;XM_032902103 XP_032757994 protein-coding 626054642 LOC116906660 60S ribosomal protein L35-like 1 24666909 24667282 - 30032202 116906660 MODEL JAAIVD010000025;XM_032913033 XP_032768924 protein-coding 626054646 LOC116903562 probable N-acetyltransferase CML1 6 60406582 60413158 + 30032202 116903562 MODEL JAAIVD010000024;XM_032906179 XP_032762070 protein-coding 626054652 LOC116914224 elongation factor 1-alpha 1-like 1 183926869 183931169 + 116914224 MODEL JAAIVD010000025 pseudo 626054653 LOC116900839 40S ribosomal protein S7-like 5 51859729 51860404 + 116900839 MODEL JAAIVD010000023 pseudo 626054654 Htr7 5-hydroxytryptamine receptor 7 ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); neurotransmitter receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); behavioral response to pain (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH alcohol use disorder (ortholog); amnestic disorder (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cilium (ortholog); dendrite (ortholog) 2 37777483 37890023 + 22301074;30032202 116891142 MODEL JAAIVD010000001;XM_032891885;XM_032891886 XP_032747776;XP_032747777 protein-coding 626054666 LOC116897525 small nucleolar RNA SNORA48 3 196074416 196074555 - 116897525 MODEL JAAIVD010000012;XR_004387541 snorna 626054669 LOC116907032 secreted seminal-vesicle Ly-6 protein 1-like 8 31346056 31347632 - 116907032 MODEL JAAIVD010000027;XM_032909979 XP_032765870 protein-coding 626054674 LOC116915034 40S ribosomal protein S25-like 13 53436054 53436475 + 116915034 MODEL JAAIVD010000008 pseudo 626054675 LOC116912989 small nucleolar RNA SNORA17 11 14721088 14721217 - 116912989 MODEL JAAIVD010000006;XR_004389552 snorna 626054678 LOC116915004 phosphatidylethanolamine-binding protein 1-like 13 31958939 31959546 + 116915004 MODEL JAAIVD010000008 pseudo 626054679 Spaar small regulatory polypeptide of amino acid response INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of TORC1 signaling (ortholog); regulation of skeletal muscle tissue regeneration (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); lysosomal proton-transporting V-type ATPase complex (ortholog) 1 2764073 2766260 - 116885834 MODEL JAAIVD010000025;XM_032887177;XM_032887183 XP_032743068;XP_032743074 protein-coding 626054687 Dffb DNA fragmentation factor subunit beta ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA binding (ortholog); DNA nuclease activity (ortholog); INVOLVED IN apoptotic chromosome condensation (ortholog); apoptotic DNA fragmentation (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH Chromosome Breakage (ortholog); transient cerebral ischemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 6742643 6754525 + 22301074;30032202 116892167 MODEL JAAIVD010000025;XM_032893674;XM_032893682 XP_032749565;XP_032749573 protein-coding 626054700 Golim4 golgi integral membrane protein 4 FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 3 77964126 78048341 + 30032202 116896775 MODEL JAAIVD010000012;XM_032898232;XM_032898233 XP_032754123;XP_032754124 protein-coding 626054721 Prr35 proline rich 35 9 3206460 3211534 - 116908915 MODEL JAAIVD010000002;XM_032912370;XM_032912371 XP_032768261;XP_032768262 proline-rich protein 35 protein-coding 626054731 Sort1 sortilin 1 ENCODES a protein that exhibits enzyme binding (ortholog); nerve growth factor binding (ortholog); nerve growth factor receptor activity (ortholog); INVOLVED IN D-glucose import (ortholog); endocytosis (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); cardiovascular system disease (ortholog); cholestasis (ortholog); FOUND IN cell surface (ortholog); cerebellar climbing fiber to Purkinje cell synapse (ortholog); clathrin-coated pit (ortholog) 3 49898522 49971954 - 22301074;30032202 116896365 MODEL JAAIVD010000012;XM_032897481 XP_032753372 sortilin protein-coding 626054756 LOC116899913 small nucleolar RNA U13 4 71922420 71922522 - 116899913 MODEL JAAIVD010000003;XR_004387885 snorna 626054759 Inf2 inverted formin 2 INVOLVED IN actin nucleation (ortholog); gene expression (ortholog); regulation of cellular component size (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease dominant intermediate E (ortholog); Charcot-Marie-Tooth Disease Type 6B (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 7 130183744 130210232 + 22301074 116905513 MODEL JAAIVD010000026;XM_032908536 XP_032764427 inverted formin-2 protein-coding 626054785 LOC116891135 ubiquitin-40S ribosomal protein S27a-like 2 36885866 36886451 + 22301074;30032202 116891135 MODEL JAAIVD010000001;XM_032891869 XP_032747760 protein-coding 626054791 LOC116910181 apoptosis inhibitor 5-like 9 23936696 23938353 + 116910181 MODEL JAAIVD010000002 pseudo 626054792 LOC116905907 ORM1-like protein 3 7 126407117 126407661 + 116905907 MODEL JAAIVD010000026 pseudo 626054793 LOC116897795 heat shock cognate 71 kDa protein-like 4 4520808 4522740 + 116897795 MODEL JAAIVD010000003 pseudo 626054794 Rad51b RAD51 paralog B ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); double-stranded DNA binding (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN blastocyst growth (ortholog); double-strand break repair via homologous recombination (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog); replication fork (ortholog) 7 93397318 93908084 + 22301074;30032202 116905208 MODEL JAAIVD010000026;XM_032908021 XP_032763912 DNA repair protein RAD51 homolog 2 protein-coding 626054808 LOC116903207 uncharacterized LOC116903207 6 18930938 18960554 + 116903207 MODEL JAAIVD010000024;XR_004388260 ncrna 626054813 LOC116911971 importin-7-like 11 35292756 35301896 - 116911971 MODEL JAAIVD010000006 pseudo 626054814 Pdgfra platelet derived growth factor receptor alpha ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); phospholipase C activator activity (ortholog); platelet-derived growth factor alpha-receptor activity (ortholog); INVOLVED IN adrenal gland development (ortholog); anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); Brain Injuries (ortholog); brain stem glioma (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell surface (ortholog) 11 31921600 31965808 + 22301074;30032202 116912078 MODEL JAAIVD010000006;XM_032915957 XP_032771848 platelet-derived growth factor receptor alpha protein-coding 626054841 Ntn4 netrin 4 ENCODES a protein that exhibits laminin-1 binding (ortholog); INVOLVED IN neuron remodeling (ortholog); regulation of branching involved in salivary gland morphogenesis by extracellular matrix-epithelial cell signaling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN basement membrane (ortholog) 1 172713219 172828017 + 22301074;30032202 116908273 MODEL JAAIVD010000025;XM_032911521 XP_032767412 netrin-4 protein-coding 626054855 Spag8 sperm associated antigen 8 INVOLVED IN flagellated sperm motility (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Leber congenital amaurosis (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cilium (ortholog) 1 2848587 2850719 + 30032202 116890956 MODEL JAAIVD010000025;XM_032891616 XP_032747507 sperm-associated antigen 8 protein-coding 626054864 LOC116895329 40S ribosomal protein S24-like 3 35110462 35110842 - 22301074;30032202 116895329 MODEL JAAIVD010000012;XM_032896636 XP_032752527 protein-coding 626054867 Mtus2 microtubule associated scaffold protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein homodimerization activity (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); intercellular bridge (ortholog) 16 5528977 5573838 - 30032202 116885167 MODEL JAAIVD010000004;XM_032886382 XP_032742273 microtubule-associated tumor suppressor candidate 2 protein-coding 626054880 Vcp valosin containing protein ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN aggresome assembly (ortholog); ATP metabolic process (ortholog); autophagosome maturation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN ATPase complex (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 1 3506517 3526148 + 22301074;30032202 116891213 MODEL JAAIVD010000025;XM_032892051 XP_032747942 transitional endoplasmic reticulum ATPase protein-coding 626054901 LOC116887614 patr class I histocompatibility antigen, A-126 alpha chain-like 18 9765630 9767803 + 30032202 116887614 MODEL JAAIVD010000013;XM_032889221 XP_032745112 protein-coding 626054908 Samd14 sterile alpha motif domain containing 14 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 59357101 59371791 - 30032202 116908625 MODEL JAAIVD010000002;XM_032911877;XM_032911878 XP_032767768;XP_032767769 sterile alpha motif domain-containing protein 14 protein-coding 626054927 LOC116895167 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 3 64612239 64613476 - 116895167 MODEL JAAIVD010000012 pseudo 626054928 LOC116911550 thrombospondin type-1 domain-containing protein 7B 10 5508166 6360486 - 30032202 116911550 MODEL JAAIVD010000005;XM_032915540 XP_032771431 protein-coding 626054958 Slc13a1 solute carrier family 13 member 1 ENCODES a protein that exhibits monoatomic anion:sodium symporter activity (ortholog); secondary active sulfate transmembrane transporter activity (ortholog); sodium:sulfate symporter activity (ortholog); INVOLVED IN sodium ion transport (ortholog); sulfate transmembrane transport (ortholog); FOUND IN apical plasma membrane (ortholog) 6 115150363 115226701 + 22301074;30032202 116904037 MODEL JAAIVD010000024;XM_032906871 XP_032762762 protein-coding 626054977 LOC116911740 60S ribosomal protein L29-like 10 30462381 30462830 + 116911740 MODEL JAAIVD010000005 pseudo 626054978 Atosb atos homolog B FOUND IN nucleus (ortholog) 1 3458846 3472300 + 116891155 MODEL JAAIVD010000025;XM_032891949;XM_032891959;XM_032891967;XM_032891977;XM_032891986;XM_032891994 XP_032747840;XP_032747850;XP_032747858;XP_032747868;XP_032747877;XP_032747885 Fam214b family with sequence similarity 214 member B;protein FAM214B protein-coding 626055005 LOC116904182 40S ribosomal protein S2-like 6 151447057 151447936 - 116904182 MODEL JAAIVD010000024 pseudo 626055006 Dhrs11 dehydrogenase/reductase 11 ENCODES a protein that exhibits 17-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN steroid biosynthetic process (ortholog) 9 85867439 85877092 + 116909554 MODEL JAAIVD010000002;XM_032913172 XP_032769063 dehydrogenase/reductase SDR family member 11 protein-coding 626055017 Piwil2 piwi like RNA-mediated gene silencing 2 ENCODES a protein that exhibits mRNA binding (ortholog); piRNA binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN germ-line stem cell population maintenance (ortholog); negative regulation of circadian rhythm (ortholog); oogenesis (ortholog); ASSOCIATED WITH celiac disease (ortholog); male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); dense body (ortholog) 12 53927741 53988957 + 22301074;30032202 116913691 MODEL JAAIVD010000007;XM_032917983;XM_032917984 XP_032773874;XP_032773875 piwi-like protein 2 protein-coding 626055047 LOC116883947 ATP synthase subunit gamma, mitochondrial-like 14 17001089 17001701 - 116883947 MODEL JAAIVD010000009 pseudo 626055048 LOC116886082 cytochrome b5 type B ENCODES a protein that exhibits enzyme activator activity (ortholog); heme binding (ortholog); nitrite reductase (NO-forming) activity (ortholog); INVOLVED IN nitric oxide biosynthetic process (ortholog); FOUND IN mitochondrial outer membrane (ortholog); nitric-oxide synthase complex (ortholog) 17 26880248 26915300 + 22301074;30032202 116886082 MODEL JAAIVD010000011;XM_032887402 XP_032743293 protein-coding 626055057 Pnma8b PNMA family member 8B 2 172142912 172145890 - 116892568 MODEL JAAIVD010000001;XM_032894346 XP_032750237 paraneoplastic antigen-like protein 8B protein-coding 626055062 LOC116899156 40S ribosomal protein S27-like 1 46384364 46384609 + 22301074;30032202 116899156 MODEL JAAIVD010000025;XM_032900712 XP_032756603 protein-coding 626055065 Zic3 Zic family zinc finger 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); atrial cardiac muscle tissue development (ortholog); axial mesoderm development (ortholog); ASSOCIATED WITH bone development disease (ortholog); Cardiovascular Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 118434119 118444459 + 30032202 116889193 MODEL JAAIVD010000014;XM_032890352 XP_032746243 Zic family member 3;zinc finger protein ZIC 3 protein-coding 626055072 Dipk2a divergent protein kinase domain 2A INVOLVED IN cardiac muscle cell proliferation (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); positive regulation of protein kinase C activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); extracellular region (ortholog) 8 86021236 86040383 - 30032202 116906976 MODEL JAAIVD010000027;XM_032909896 XP_032765787 protein-coding 626055079 Lrrn1 leucine rich repeat neuronal 1 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH stomach cancer (ortholog) 6 39196692 39242218 - 22301074 116903443 MODEL JAAIVD010000024;XM_032905997;XM_032905998 XP_032761888;XP_032761889 leucine-rich repeat neuronal protein 1 protein-coding 626055088 LOC116888481 protein phosphatase inhibitor 2 X 26586010 26586917 + 22301074;30032202 116888481 MODEL JAAIVD010000014;XM_032889756 XP_032745647 protein-coding 626055093 Uts2r urotensin 2 receptor ENCODES a protein that exhibits urotensin II receptor activity (ortholog); INVOLVED IN negative regulation of blood pressure (ortholog); negative regulation of glomerular filtration (ortholog); negative regulation of urine volume (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); cardiomyopathy (ortholog); Diabetic Nephropathies (ortholog); FOUND IN early endosome (ortholog); recycling endosome (ortholog) 9 62861935 62863095 - 22301074;30032202 116909839 MODEL JAAIVD010000002;XM_032913563 XP_032769454 urotensin-2 receptor protein-coding 626055096 LOC116894439 39S ribosomal protein L18, mitochondrial-like 2 164273364 164274338 + 22301074;30032202 116894439 MODEL JAAIVD010000001;XM_032896142 XP_032752033 protein-coding 626055101 Pfkfb2 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2 ENCODES a protein that exhibits 6-phosphofructo-2-kinase activity (ortholog); fructose-2,6-bisphosphate 2-phosphatase activity (ortholog); kinase binding (ortholog); INVOLVED IN fructose 2,6-bisphosphate metabolic process (ortholog); glucose catabolic process (ortholog); glycolytic process (ortholog); PARTICIPATES IN glycolysis pathway; FOUND IN 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase complex (ortholog); nucleoplasm (ortholog) 10 5099551 5126585 + 22301074;30032202 116911698 MODEL JAAIVD010000005;XM_032915653;XM_032915654;XM_032915655;XM_032915657;XM_032915658;XM_032915659;XM_032915660;XM_032915661;XM_032915662 XP_032771544;XP_032771545;XP_032771546;XP_032771548;XP_032771549;XP_032771550;XP_032771551;XP_032771552;XP_032771553 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase 2 protein-coding 626055142 LOC116912007 interferon-induced transmembrane protein 3-like 11 56316860 56317278 - 116912007 MODEL JAAIVD010000006 pseudo 626055143 LOC116910128 uncharacterized LOC116910128 9 1047233 1049488 + 116910128 MODEL JAAIVD010000002;XR_004389136 ncrna 626055148 LOC116897712 high mobility group protein B1-like 4 66817829 66818529 - 116897712 MODEL JAAIVD010000003 pseudo 626055149 LOC116894567 NACHT, LRR and PYD domains-containing protein 4F-like 2 178711004 178733591 - 22301074;30032202 116894567 MODEL JAAIVD010000001;XM_032896281;XM_032896282;XM_032896283;XM_032896284 XP_032752172;XP_032752173;XP_032752174;XP_032752175 NACHT, LRR and PYD domains-containing protein 4A-like protein-coding 626055167 Mustn1 musculoskeletal, embryonic nuclear protein 1 INVOLVED IN embryonic limb morphogenesis (ortholog); glucose homeostasis (ortholog); positive regulation of chondrocyte differentiation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 13 6581756 6584956 + 22301074 116914301 MODEL JAAIVD010000008;XM_032918542 XP_032774433 musculoskeletal embryonic nuclear protein 1 protein-coding 626055174 Plekha1 pleckstrin homology domain containing A1 ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); B cell receptor signaling pathway (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 71170612 71221130 - 30032202 116891417 MODEL JAAIVD010000001;XM_032892443;XM_032892444 XP_032748334;XP_032748335 pleckstrin homology domain-containing family A member 1 protein-coding 626055196 LOC116890554 small nucleolar RNA SNORA17 1 250219714 250219851 - 116890554 MODEL JAAIVD010000025;XR_004386728 snorna 626055199 Cc2d1b coiled-coil and C2 domain containing 1B ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); nucleoplasm (ortholog) 1 46237198 46251422 - 30032202 116899119 MODEL JAAIVD010000025;XM_032900645 XP_032756536 coiled-coil and C2 domain-containing protein 1B protein-coding 626055228 LOC116899840 small nucleolar RNA SNORA48 4 175632321 175632463 - 116899840 MODEL JAAIVD010000003;XR_004387837 snorna 626055231 Napa NSF attachment protein alpha ENCODES a protein that exhibits protein-containing complex binding (ortholog); SNARE binding (ortholog); syntaxin binding (ortholog); INVOLVED IN apical protein localization (ortholog); brain development (ortholog); intracellular protein transport (ortholog); ASSOCIATED WITH Idiopathic Generalized Epilepsy (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cytoplasmic vesicle (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 2 172961726 172980674 - 22301074;30032202 116892609 MODEL JAAIVD010000001;XM_032894411 XP_032750302 alpha-soluble NSF attachment protein protein-coding 626055246 LOC116911887 U6 spliceosomal RNA 10 41689173 41689271 - 116911887 MODEL JAAIVD010000005 pseudo 626055247 Tp53bp1 tumor protein p53 binding protein 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); histone H4K20me methyltransferase activity (ortholog); histone H4K20me2 reader activity (ortholog); INVOLVED IN cellular response to X-ray (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); glioblastoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); DNA repair complex (ortholog) 5 99352468 99449053 - 30032202 116901854 MODEL JAAIVD010000023;XM_032904048;XM_032904049;XM_032904050 XP_032759939;XP_032759940;XP_032759941 TP53-binding protein 1 protein-coding 626055286 Zbtb8b zinc finger and BTB domain containing 8B FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 28710629 28726379 + 22301074;30032202 116896158 MODEL JAAIVD010000025;XM_032897154 XP_032753045 zinc finger and BTB domain-containing protein 8B protein-coding 626055294 LOC116895629 ETS translocation variant 5-like 3 174334459 174335979 + 116895629 MODEL JAAIVD010000012 pseudo 626055295 Slc1a4 solute carrier family 1 member 4 ENCODES a protein that exhibits chloride channel activity (ortholog); L-alanine transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN cognition (ortholog); hydroxyproline transport (ortholog); L-alanine import across plasma membrane (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN centrosome (ortholog); dendrite (ortholog); intermediate filament (ortholog) 11 88587136 88615306 - 22301074;30032202 116912179 MODEL JAAIVD010000006;XM_032916109 XP_032772000 neutral amino acid transporter A protein-coding 626055307 Frmd8 FERM domain containing 8 INVOLVED IN positive regulation of tumor necrosis factor production (ortholog); protein localization to plasma membrane (ortholog); FOUND IN centriolar satellite (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 1821109 1840909 + 22301074;30032202 116890693 MODEL JAAIVD010000001;XM_032891111 XP_032747002 FERM domain-containing protein 8 protein-coding 626055322 Stard9 StAR related lipid transfer domain containing 9 ENCODES a protein that exhibits microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN spindle assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bipolar disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN centriole (ortholog); cytoplasm (ortholog); nucleus (ortholog) 5 98753125 98843262 + 22301074;30032202 116901843 MODEL JAAIVD010000023;XM_032904024 XP_032759915 stAR-related lipid transfer protein 9 protein-coding 626055359 LOC116906109 catenin alpha-2-like 7 77757742 77760041 + 116906109 MODEL JAAIVD010000026 pseudo 626055360 Fgd1 FYVE, RhoGEF and PH domain containing 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cytoskeleton organization (ortholog); filopodium assembly (ortholog); ASSOCIATED WITH Aarskog syndrome (ortholog); attention deficit hyperactivity disorder (ortholog); Congenital Foot Deformities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) X 30187095 30228679 - 22301074;30032202 116887812 MODEL JAAIVD010000014;XM_032889336 XP_032745227 FYVE, RhoGEF and PH domain-containing protein 1 protein-coding 626055382 LOC116902513 small nucleolar RNA SNORA71 5 137727312 137727445 + 116902513 MODEL JAAIVD010000023;XR_004388122 snorna 626055385 LOC116883769 olfactory receptor 2B11-like 14 40912872 40913822 + 22301074 116883769 MODEL JAAIVD010000009;XM_032885014 XP_032740905 protein-coding 626055388 Rrp36 ribosomal RNA processing 36 INVOLVED IN ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 4 83190253 83197065 + 30032202 116899101 MODEL JAAIVD010000003;XM_032900616;XM_032900617 XP_032756507;XP_032756508 ribosomal RNA processing protein 36 homolog protein-coding 626055403 Dnaja2 DnaJ heat shock protein family (Hsp40) member A2 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN carbon tetrachloride metabolic process (ortholog); protein refolding (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH liver disease (ortholog); FOUND IN cytosol (ortholog) 17 14203910 14222624 + 22301074;30032202 116886131 MODEL JAAIVD010000011;XM_032887473 XP_032743364 dnaJ homolog subfamily A member 2 protein-coding 626055416 Sec24c SEC24 homolog C, COPII component ENCODES a protein that exhibits SNARE binding (ortholog); zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); microcephaly (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog) 12 90480647 90502763 + 22301074;30032202 116913295 MODEL JAAIVD010000007;XM_032917422;XM_032917423 XP_032773313;XP_032773314 SEC24 homolog C, COPII coat complex component;protein transport protein Sec24C protein-coding 626055449 LOC116885926 NF-kappa-B inhibitor-interacting Ras-like protein 2 16 2196149 2196516 + 116885926 MODEL JAAIVD010000004 pseudo 626055450 LOC116900882 olfactory receptor 5D13-like 5 69799874 69802155 - 116900882 MODEL JAAIVD010000023 pseudo 626055451 Ankrd28 ankyrin repeat domain 28 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN positive regulation of focal adhesion assembly (ortholog); FOUND IN cytosol (ortholog); lamellipodium (ortholog); protein serine/threonine phosphatase complex (ortholog) 13 7422183 7501377 - 22301074 116914852 MODEL JAAIVD010000008;XM_032919302 XP_032775193 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A protein-coding 626055483 Htr1a 5-hydroxytryptamine receptor 1A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); adult behavior (ortholog); behavioral fear response (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN axon hillock (ortholog); GABA-ergic synapse (ortholog); neuronal cell body (ortholog) 3 191907018 191908991 - 22301074;30032202 116897218 MODEL JAAIVD010000012;XM_032898936 XP_032754827 protein-coding 626055488 Atp7a ATPase copper transporting alpha ENCODES a protein that exhibits ATP binding (ortholog); copper ion binding (ortholog); copper ion transmembrane transporter activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); blood vessel development (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN cisplatin drug pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); basolateral plasma membrane (ortholog) X 65579240 65681774 + 22301074 116888322 MODEL JAAIVD010000014;XM_032889595 XP_032745486 copper-transporting ATPase 1 protein-coding 626055515 Ston2 stonin 2 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); regulation of endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytosol (ortholog); nucleolus (ortholog) 7 104772718 104878055 - 22301074;30032202 116905335 MODEL JAAIVD010000026;XM_032908231 XP_032764122 stonin-2 protein-coding 626055527 Exog exo/endonuclease G ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); endonuclease activity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 8 110680566 110701390 + 22301074;30032202 116907916 MODEL JAAIVD010000027;XM_032911119 XP_032767010 nuclease EXOG, mitochondrial protein-coding 626055537 LOC116889229 tumor suppressor candidate 2-like X 52681830 52682294 + 30032202 116889229 MODEL JAAIVD010000014;XM_032890380 XP_032746271 protein-coding 626055542 LOC116900585 cleavage stimulation factor subunit 3-like 5 90530619 90531055 + 116900585 MODEL JAAIVD010000023 pseudo 626055543 Topors TOP1 binding arginine/serine rich protein, E3 ubiquitin ligase ENCODES a protein that exhibits antigen binding (ortholog); DNA binding (ortholog); DNA topoisomerase binding (ortholog); INVOLVED IN DNA damage response (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); ASSOCIATED WITH Choroideremia (ortholog); COVID-19 (ortholog); fundus dystrophy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); gamma-tubulin complex (ortholog) 1 117933170 117944533 + 22301074;30032202 116902659 MODEL JAAIVD010000025;XM_032905038 XP_032760929 E3 ubiquitin-protein ligase Topors protein-coding 626055550 Mmp20 matrix metallopeptidase 20 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN amelogenesis (ortholog); extracellular matrix disassembly (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH amelogenesis imperfecta hypomaturation type 2A2 (ortholog); amelogenesis imperfecta type 1C (ortholog); autosomal dominant intellectual developmental disorder 56 (ortholog) 8 3848404 3886221 + 22301074;30032202 116907870 MODEL JAAIVD010000027;XM_032911058 XP_032766949 matrix metalloproteinase-20 protein-coding 626055564 Entrep3 endosomal transmembrane epsin interactor 3 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog) 3 64487194 64492971 - 22301074 116896662 MODEL JAAIVD010000012;XM_032897999;XM_032898000;XM_032898001;XM_032898002;XM_032898003;XM_032898004;XM_032898005;XM_032898006;XM_032898007;XM_032898008;XM_032898010 XP_032753890;XP_032753891;XP_032753892;XP_032753893;XP_032753894;XP_032753895;XP_032753896;XP_032753897;XP_032753898;XP_032753899;XP_032753901 Fam189b family with sequence similarity 189 member B;protein FAM189B protein-coding 626055594 Mgat4c MGAT4 family member C 1 180571733 180780758 + 30032202 116908616 MODEL JAAIVD010000025;XM_032911855;XM_032911864;XM_032911873 XP_032767746;XP_032767755;XP_032767764 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase C protein-coding 626055608 Exoc4 exocyst complex component 4 ENCODES a protein that exhibits PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); establishment of cell polarity (ortholog); Golgi to transport vesicle transport (ortholog); PARTICIPATES IN E-cadherin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Colorectal Cancer 10 (ortholog); FOUND IN cell leading edge (ortholog); centrosome (ortholog); cytoplasm (ortholog) 6 105723281 106448703 - 22301074;30032202 116903987 MODEL JAAIVD010000024;XM_032906792 XP_032762683 protein-coding 626055630 LOC116887373 40S ribosomal protein S7-like 18 26714022 26714607 + 116887373 MODEL JAAIVD010000013 pseudo 626055631 Kcnj3 potassium inwardly rectifying channel subfamily J member 3 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN potassium ion import across plasma membrane (ortholog); response to electrical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); inward rectifier potassium channel complex (ortholog) 5 33053421 33214383 + 22301074;30032202 116901419 MODEL JAAIVD010000023;XM_032903305;XM_032903306 XP_032759196;XP_032759197 G protein-activated inward rectifier potassium channel 1 protein-coding 626055641 Arvcf ARVCF delta catenin family member ENCODES a protein that exhibits cadherin binding (ortholog); INVOLVED IN RNA splicing (ortholog); ASSOCIATED WITH COVID-19 (ortholog); DiGeorge syndrome (ortholog); long QT syndrome (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); nucleus (ortholog) 4 3612567 3669754 + 30032202 116898670 MODEL JAAIVD010000003;XM_032899918 XP_032755809 armadillo repeat protein deleted in velo-cardio-facial syndrome protein-coding 626055665 Phf7 PHD finger protein 7 INVOLVED IN negative regulation of osteoclast proliferation (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nuclear speck (ortholog) 13 6940559 6954431 - 30032202 116914240 MODEL JAAIVD010000008;XM_032918448;XR_004389736 XP_032774339 protein-coding 626055682 Epb41l4a erythrocyte membrane protein band 4.1 like 4A ASSOCIATED WITH Failure to Thrive (ortholog); Hereditary Neoplastic Syndromes (ortholog) 15 10331028 10536910 + 22301074 116884521 MODEL JAAIVD010000010;XM_032885655 XP_032741546 band 4.1-like protein 4A protein-coding 626055709 Slc29a1 solute carrier family 29 member 1 (Augustine blood group) ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); ADP catabolic process (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); Alcohol Withdrawal Seizures (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 4 84294983 84303716 + 22301074;30032202 116899129 MODEL JAAIVD010000003;XM_032900662 XP_032756553 equilibrative nucleoside transporter 1 protein-coding 626055726 Abhd11 abhydrolase domain containing 11 ENCODES a protein that exhibits lipase activity (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) 16 19029600 19032405 - 22301074;30032202 116885653 MODEL JAAIVD010000004;XM_032886957 XP_032742848 protein ABHD11 protein-coding 626055736 Gstk1 glutathione S-transferase kappa 1 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 6 97972612 97976974 - 22301074;30032202 116903900 MODEL JAAIVD010000024;XM_032906669 XP_032762560 protein-coding 626055748 Vwce von Willebrand factor C and EGF domains ASSOCIATED WITH Dwarfism (ortholog); FOUND IN cytoplasm (ortholog) 2 10116707 10147590 + 22301074;30032202 116890966 MODEL JAAIVD010000001;XM_032891627 XP_032747518 von Willebrand factor C and EGF domain-containing protein protein-coding 626055771 LOC116914536 putative protein FAM90A7P 13 64492725 64501168 - 116914536 MODEL JAAIVD010000008;XM_032918865 XP_032774756 protein-coding 626055777 LOC116909071 myosin-8 9 46879380 46909404 + 22301074 116909071 MODEL JAAIVD010000002;XM_032912546 XP_032768437 protein-coding 626055820 Slc39a11 solute carrier family 39 member 11 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN zinc ion import across plasma membrane (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Ependymomas (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) 9 75655478 76067771 + 22301074;30032202 116909178 MODEL JAAIVD010000002;XM_032912669 XP_032768560 zinc transporter ZIP11 protein-coding 626055834 Cap1 cyclase associated actin cytoskeleton regulatory protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); ameboidal-type cell migration (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Neoplasm Metastasis (ortholog); osteoporosis (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 1 35366123 35392451 + 22301074;30032202 116897171 MODEL JAAIVD010000025;XM_032898855;XM_032898863;XM_032898871;XM_032898880 XP_032754746;XP_032754754;XP_032754762;XP_032754771 adenylyl cyclase-associated protein 1 protein-coding 626055861 LOC116887903 putative ankyrin repeat domain-containing protein 20A5 X 53156178 53168661 + 22301074 116887903 MODEL JAAIVD010000014;XM_032889377 XP_032745268 protein-coding 626055868 Ddx5 DEAD-box helicase 5 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); androgen receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); endometriosis (ortholog); skin squamous cell carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 9 72340350 72348629 + 22301074;30032202 116910182 MODEL JAAIVD010000002;XM_032914041;XM_032914042;XM_032914043 XP_032769932;XP_032769933;XP_032769934 probable ATP-dependent RNA helicase DDX5 protein-coding 626055892 Rft1 RFT1 glycolipid translocator homolog INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); glycolipid translocation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation In (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 6342639 6381151 + 22301074;30032202 116914639 MODEL JAAIVD010000008;XM_032919033 XP_032774924 RFT1 homolog;protein RFT1 homolog protein-coding 626055909 LOC116914129 small nucleolar RNA SNORA17 12 32399360 32399489 + 116914129 MODEL JAAIVD010000007;XR_004389691 snorna 626055912 Psors1c2 psoriasis susceptibility 1 candidate 2 ASSOCIATED WITH multiple myeloma (ortholog) 18 8740710 8741699 + 116887456 MODEL JAAIVD010000013;XM_032889064 XP_032744955 psoriasis susceptibility 1 candidate gene 2 protein protein-coding 626055916 LOC116900878 olfactory receptor 5W2-like 5 69292899 69305047 + 116900878 MODEL JAAIVD010000023 pseudo 626055917 Aard alanine and arginine rich domain containing protein INVOLVED IN lung development (ortholog); response to testosterone (ortholog) 1 226629801 226634857 + 116890085 MODEL JAAIVD010000025;XM_032890843 XP_032746734 alanine and arginine-rich domain-containing protein protein-coding 626055923 Plekhh1 pleckstrin homology, MyTH4 and FERM domain containing H1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 7 93146289 93195429 + 22301074 116905202 MODEL JAAIVD010000026;XM_032908010;XM_032908011;XM_032908012;XM_032908013 XP_032763901;XP_032763902;XP_032763903;XP_032763904 pleckstrin homology domain-containing family H member 1 protein-coding 626055966 Rnaset2 ribonuclease T2 ENCODES a protein that exhibits RNA nuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); ASSOCIATED WITH brain disease (ortholog); colon adenocarcinoma (ortholog); colon cancer (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog); extracellular space (ortholog); lysosome (ortholog) 2 187000581 187017310 - 22301074;30032202 116892807 MODEL JAAIVD010000001;XM_032894682 XP_032750573 protein-coding 626055979 Pcolce2 procollagen C-endopeptidase enhancer 2 ENCODES a protein that exhibits collagen binding (ortholog); heparin binding (ortholog); peptidase activator activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 8 87094261 87150725 + 22301074 116906748 MODEL JAAIVD010000027;XM_032909576 XP_032765467 protein-coding 626055992 LOC116901542 tetratricopeptide repeat protein 30A2 5 53329885 53333093 - 22301074;30032202 116901542 MODEL JAAIVD010000023;XM_032903526 XP_032759417 protein-coding 626055997 LOC116886622 cancer/testis antigen 55-like 17 15017652 15048520 + 116886622 MODEL JAAIVD010000011;XM_032888129 XP_032744020 protein-coding 626056006 LOC116889361 40S ribosomal protein S23-like 1 132285007 132285436 + 116889361 MODEL JAAIVD010000025 pseudo 626056007 LOC116898278 olfactory receptor 12-like 4 164569151 164570119 + 22301074;30032202 116898278 MODEL JAAIVD010000003;XM_032899630 XP_032755521 protein-coding 626056010 Polr3h RNA polymerase III subunit H ENCODES a protein that exhibits DNA-directed RNA polymerase activity (ortholog); INVOLVED IN nucleobase-containing compound metabolic process (ortholog); transcription by RNA polymerase III (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); RNA polymerase III complex (ortholog) 1 251652524 251664135 - 22301074;30032202 116914093 MODEL JAAIVD010000025;XM_032918409 XP_032774300 DNA-directed RNA polymerase III subunit RPC8 protein-coding 626056021 LOC116887415 RT1 class I histocompatibility antigen, AA alpha chain-like 18 7875647 8371778 + 116887415 MODEL JAAIVD010000013 pseudo 626056022 Foxa2 forkhead box A2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult locomotory behavior (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH combined pituitary hormone deficiency 3 (ortholog); Diaphragmatic Hernia (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 127616959 127621150 - 22301074;30032202 116902071 MODEL JAAIVD010000023;XM_032904358;XM_032904359;XM_032904360 XP_032760249;XP_032760250;XP_032760251 hepatocyte nuclear factor 3-beta protein-coding 626056035 Arhgap5 Rho GTPase activating protein 5 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN mammary gland development (ortholog); positive regulation of epithelial cell migration (ortholog); positive regulation of mesenchymal cell proliferation (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); lung metastasis (ortholog); Lymphatic Metastasis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 7 65931541 65991217 + 22301074 116905043 MODEL JAAIVD010000026;XM_032907723 XP_032763614 rho GTPase-activating protein 5 protein-coding 626056046 LOC116912619 40S ribosomal protein S17-like 11 70106234 70111361 + 116912619 MODEL JAAIVD010000006 pseudo 626056047 LOC116906555 40S ribosomal protein S19-like 8 46088609 46089008 - 116906555 MODEL JAAIVD010000027 pseudo 626056048 LOC116902524 small nucleolar RNA SNORD62 5 3415715 3415799 - 116902524 MODEL JAAIVD010000023;XR_004388133 snorna 626056051 LOC116906757 ATP synthase membrane subunit DAPIT, mitochondrial-like 8 59331595 59331847 + 116906757 MODEL JAAIVD010000027;XM_032909585 XP_032765476 protein-coding 626056056 Smarcd3 SWI/SNF related BAF chromatin remodeling complex subunit D3 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cardiac right ventricle formation (ortholog); chromatin remodeling (ortholog); heart morphogenesis (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH COVID-19 (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nBAF complex (ortholog) 6 153791181 153800644 - 30032202 116904214 MODEL JAAIVD010000024;XM_032907145 XP_032763036 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 protein-coding 626056073 LOC116894248 olfactory receptor 6F1-like 2 114663268 114664227 - 22301074 116894248 MODEL JAAIVD010000001;XM_032895954 XP_032751845 protein-coding 626056076 LOC116901036 40S ribosomal protein SA-like 5 130254741 130257152 + 116901036 MODEL JAAIVD010000023 pseudo 626056077 Rhog ras homolog family member G ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); activation of GTPase activity (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 2 100535590 100547041 - 22301074;30032202 116891787 MODEL JAAIVD010000001;XM_032893136;XM_032893137;XM_032893138 XP_032749027;XP_032749028;XP_032749029 rho-related GTP-binding protein RhoG protein-coding 626056090 Ptk2 protein tyrosine kinase 2 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel development (ortholog); cell migration (ortholog); PARTICIPATES IN integrin mediated signaling pathway; long term potentiation; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) 1 245983571 246186467 - 22301074 116912392 MODEL JAAIVD010000025;XM_032916454;XM_032916460;XM_032916467;XM_032916480;XM_032916487;XR_004389457;XR_004389458 XP_032772345;XP_032772351;XP_032772358;XP_032772371;XP_032772378 focal adhesion kinase 1 protein-coding 626056144 LOC116887806 60S ribosomal protein L19-like 1 59851430 59852014 - 116887806 MODEL JAAIVD010000025 pseudo 626056145 Asphd1 aspartate beta-hydroxylase domain containing 1 2 74943537 74947334 + 22301074 116891496 MODEL JAAIVD010000001;XM_032892606;XM_032892607 XP_032748497;XP_032748498 aspartate beta-hydroxylase domain-containing protein 1 protein-coding 626056156 Ccny cyclin Y ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); positive regulation of autophagy (ortholog); positive regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH Crohn's disease (ortholog); ulcerative colitis (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasmic cyclin-dependent protein kinase holoenzyme complex (ortholog); nucleolus (ortholog) 14 26599289 26703225 + 22301074;30032202 116884044 MODEL JAAIVD010000009;XM_032885290 XP_032741181 cyclin-Y protein-coding 626056168 Fmr1 Fragile X messenger ribonucleoprotein 1 ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); G-quadruplex RNA binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cellular response to potassium ion (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); Cajal body (ortholog) X 126737972 126775557 - 30032202 116888280 MODEL JAAIVD010000014;XM_032889551;XM_032889552;XM_032889554;XM_032889555;XM_032889556;XM_032889557;XM_032889558 XP_032745442;XP_032745443;XP_032745445;XP_032745446;XP_032745447;XP_032745448;XP_032745449 FMRP translational regulator 1;synaptic functional regulator FMR1 protein-coding 626056203 Neurod2 neuronal differentiation 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN associative learning (ortholog); behavioral fear response (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 72 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 9 56063489 56067817 + 22301074 116909643 MODEL JAAIVD010000002;XM_032913285;XM_032913286 XP_032769176;XP_032769177 neurogenic differentiation factor 2 protein-coding 626056214 Drap1 DR1 associated protein 1 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 2 2247096 2249290 + 22301074;30032202 116890721 MODEL JAAIVD010000001;XM_032891172;XM_032891173 XP_032747063;XP_032747064 dr1-associated corepressor protein-coding 626056227 LOC116891932 COP9 signalosome complex subunit 8-like 2 13758408 13759181 + 116891932 MODEL JAAIVD010000001 pseudo 626056228 Lamp5 lysosomal associated membrane protein family member 5 INVOLVED IN presynaptic modulation of chemical synaptic transmission (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); dendrite membrane (ortholog); early endosome membrane (ortholog) 5 115692151 115704331 + 30032202 116902016 MODEL JAAIVD010000023;XM_032904287 XP_032760178 lysosome-associated membrane glycoprotein 5 protein-coding 626056238 LOC116891505 uncharacterized LOC116891505 ENCODES a protein that exhibits fructose-bisphosphate aldolase activity (ortholog); protease binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); positive regulation of cell migration (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose and mannose metabolic pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH cystadenoma (ortholog); hereditary fructose intolerance syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 75087803 75096792 + 116891505 MODEL JAAIVD010000001;XM_032892637;XM_032892638 XP_032748528;XP_032748529 uncharaterized LOC112694756 homolog protein-coding 626056249 LOC116912229 UDP-glucuronosyltransferase 2B31-like 11 70783 95117 + 22301074 116912229 MODEL JAAIVD010000006;XM_032916188;XM_032916189 XP_032772079;XP_032772080 protein-coding 626056262 Fam53b family with sequence similarity 53 member B INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); regulation of canonical Wnt signaling pathway (ortholog); FOUND IN nucleus (ortholog) 2 69068558 69134057 + 30032202 116891394 MODEL JAAIVD010000001;XM_032892418 XP_032748309 protein FAM53B protein-coding 626056270 Utp18 UTP18 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 51641355 51667560 + 22301074;30032202 116910140 MODEL JAAIVD010000002;XM_032913986 XP_032769877 U3 small nucleolar RNA-associated protein 18 homolog protein-coding 626056285 LOC116894608 triosephosphate isomerase-like 2 184165030 184165788 - 116894608 MODEL JAAIVD010000001 pseudo 626056286 Tnf tumor necrosis factor ENCODES a protein that exhibits cytokine activity (ortholog); death receptor agonist activity (ortholog); histone H3K9ac reader activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN ceramide signaling pathway; Fc epsilon receptor mediated signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH acne (ortholog); acquired immunodeficiency syndrome (ortholog); Acute Coronary Syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) 18 7795823 7798458 - 22301074;30032202 116887140 MODEL JAAIVD010000013;XM_032888689 XP_032744580 protein-coding 626056294 LOC116889504 small nucleolar RNA SNORA48 X 94657365 94657511 + 116889504 MODEL JAAIVD010000014;XR_004386450 snorna 626056297 LOC116912254 glyceraldehyde-3-phosphate dehydrogenase-like 11 24477000 24478007 + 116912254 MODEL JAAIVD010000006 pseudo 626056298 LOC116884096 small nucleolar RNA SNORA76 14 76092200 76092332 - 116884096 MODEL JAAIVD010000009;XR_004385835 snorna 626056301 Rangap1 Ran GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); RNA binding (ortholog); small GTPase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); cellular response to peptide hormone stimulus (ortholog); cellular response to vasopressin (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Carotid Artery Injuries (ortholog); diffuse large B-cell lymphoma (ortholog); nephronophthisis-like nephropathy 1 (ortholog); FOUND IN aggresome (ortholog); axon cytoplasm (ortholog); cytoplasm (ortholog) 1 251451177 251471813 - 22301074;30032202 116914036 MODEL JAAIVD010000025;XM_032918319 XP_032774210 ran GTPase-activating protein 1 protein-coding 626056320 Hs6st1 heparan sulfate 6-O-sulfotransferase 1 ENCODES a protein that exhibits heparan sulfate 6-sulfotransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); labyrinthine layer blood vessel development (ortholog); ASSOCIATED WITH hypogonadotropic hypogonadism 15 with or without anosmia (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN Golgi apparatus (ortholog) 4 112272078 112311014 + 22301074;30032202 116899283 MODEL JAAIVD010000003;XM_032900914 XP_032756805 heparan-sulfate 6-O-sulfotransferase 1 protein-coding 626056326 LOC116897803 splicing factor 3A subunit 2-like 4 9802241 9803511 + 116897803 MODEL JAAIVD010000003 pseudo 626056327 LOC116904460 aldo-keto reductase family 1 member C2-like 6 132113124 132164879 + 116904460 MODEL JAAIVD010000024 pseudo 626056328 LOC116888127 barH-like 1 homeobox protein X 103758023 103768411 + 22301074 116888127 MODEL JAAIVD010000014;XM_032889473 XP_032745364 protein-coding 626056338 Tac1 tachykinin precursor 1 ENCODES a protein that exhibits neuromedin K receptor binding (ortholog); neuropeptide hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); associative learning (ortholog); cellular response to nerve growth factor stimulus (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic disease (ortholog); amnestic disorder (ortholog); FOUND IN axon (ortholog); extracellular region (ortholog); extracellular space (ortholog) 6 130732498 130740502 - 22301074 116904086 MODEL JAAIVD010000024;XM_032906954 XP_032762845 protachykinin-1 protein-coding 626056349 Tshr thyroid stimulating hormone receptor ENCODES a protein that exhibits protein-containing complex binding (ortholog); signaling receptor activity (ortholog); thyroid-stimulating hormone receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); autoimmune thyroiditis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 7 104630147 104679484 + 22301074;30032202 116905332 MODEL JAAIVD010000026;XM_032908228 XP_032764119 thyrotropin receptor protein-coding 626056362 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12102013 12102085 + 116895152 MODEL JAAIVD010000001 trna 626056363 Lhx6 LIM homeobox 6 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebral cortex GABAergic interneuron migration (ortholog); cerebral cortex neuron differentiation (ortholog); cerebral cortex radially oriented cell migration (ortholog); FOUND IN nucleus (ortholog) 5 13374581 13396587 + 22301074;30032202 116901342 MODEL JAAIVD010000023;XM_032903173;XM_032903174;XM_032903175;XM_032903176 XP_032759064;XP_032759065;XP_032759066;XP_032759067 LIM/homeobox protein Lhx6 protein-coding 626056384 Glyctk glycerate kinase ENCODES a protein that exhibits glycerate kinase activity (ortholog); INVOLVED IN fructose catabolic process (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH D-glyceric aciduria (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 8 97460835 97467945 - 30032202 116907458 MODEL JAAIVD010000027;XM_032910442;XM_032910443;XM_032910444 XP_032766333;XP_032766334;XP_032766335 protein-coding 626056399 Gpx4 glutathione peroxidase 4 ENCODES a protein that exhibits glutathione peroxidase activity (ortholog); identical protein binding (ortholog); phospholipid-hydroperoxide glutathione peroxidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); arachidonate metabolic process (ortholog); cerebellum development (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Binge Drinking (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) 1 154819107 154821897 - 22301074;30032202 116905409 MODEL JAAIVD010000025;XM_032908372;XM_032908374 XP_032764263;XP_032764265 phospholipid hydroperoxide glutathione peroxidase protein-coding 626056413 LOC116911852 U2 spliceosomal RNA 10 54324620 54324800 + 116911852 MODEL JAAIVD010000005 pseudo 626056414 Medag mesenteric estrogen dependent adipogenesis INVOLVED IN positive regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog) 16 4439596 4460417 - 30032202 116885779 MODEL JAAIVD010000004;XM_032887108 XP_032742999 mesenteric estrogen-dependent adipogenesis protein protein-coding 626056423 Rbm24 RNA binding motif protein 24 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA CDS binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); DNA damage response (ortholog); endocardial cushion development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 65392205 65403887 + 30032202 116883686 MODEL JAAIVD010000009;XM_032884898 XP_032740789 RNA-binding protein 24 protein-coding 626056431 Scrn3 secernin 3 INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog) 5 50663263 50687910 + 22301074;30032202 116901518 MODEL JAAIVD010000023;XM_032903493;XM_032903494;XM_032903495 XP_032759384;XP_032759385;XP_032759386 secernin-3 protein-coding 626056449 Cfap91 cilia and flagella associated protein 91 INVOLVED IN axonemal central apparatus assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure 38 (ortholog); spermatogenic failure 51 (ortholog) 4 23247398 23289532 - 116897986 MODEL JAAIVD010000003;XM_032899387 XP_032755278 cilia- and flagella-associated protein 91 protein-coding 626056469 LOC116894128 olfactory receptor 52E8-like 2 103916557 103917495 - 22301074 116894128 MODEL JAAIVD010000001;XM_032895847 XP_032751738 protein-coding 626056472 LOC116907754 uncharacterized LOC116907754 8 78014239 78020090 + 116907754 MODEL JAAIVD010000027;XR_004388842 ncrna 626056478 LOC116887259 olfactory receptor 2D3-like 1 38293879 38298281 - 22301074 116887259 MODEL JAAIVD010000025;XM_032888829;XM_032888837;XM_032888845 XP_032744720;XP_032744728;XP_032744736 olfactory receptor 2A5-like protein-coding 626056487 Spire1 spire type actin nucleation factor 1 INVOLVED IN actin cytoskeleton organization (ortholog); behavioral fear response (ortholog); cleavage furrow formation (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasmic vesicle membrane (ortholog) 15 63673622 63800434 + 30032202 116884628 MODEL JAAIVD010000010;XM_032885769 XP_032741660 protein spire homolog 1 protein-coding 626056508 Ptgfrn prostaglandin F2 receptor inhibitor INVOLVED IN lipid droplet organization (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 3 56954502 57025551 + 116895788 MODEL JAAIVD010000012;XM_032896933 XP_032752824 prostaglandin F2 receptor negative regulator protein-coding 626056520 LOC116887603 serine/arginine-rich splicing factor 6-like 18 9391832 9400424 + 116887603 MODEL JAAIVD010000013 pseudo 626056521 Xpo6 exportin 6 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 75743234 75834040 + 22301074;30032202 116891532 MODEL JAAIVD010000001;XM_032892682;XM_032892684 XP_032748573;XP_032748575 exportin-6 protein-coding 626056551 Hsd17b7 hydroxysteroid 17-beta dehydrogenase 7 ENCODES a protein that exhibits 3-beta-hydroxysteroid 3-dehydrogenase (NADP+) activity (ortholog); 5-alpha-androstane-3-beta,17-beta-diol dehydrogenase (NADP+) activity (ortholog); estradiol 17-beta-dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); brain development (ortholog); cell differentiation (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog) 10 49162066 49178647 - 22301074;30032202 116911226 MODEL JAAIVD010000005;XM_032915124 XP_032771015 3-keto-steroid reductase protein-coding 626056564 Izumo1r IZUMO1 receptor, JUNO ENCODES a protein that exhibits folic acid binding (ortholog); signaling receptor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN cell adhesion (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); single fertilization (ortholog); FOUND IN plasma membrane (ortholog) 8 10699705 10703353 - 30032202 116907688 MODEL JAAIVD010000027;XM_032910794 XP_032766685 sperm-egg fusion protein Juno protein-coding 626056573 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 12095139 12095211 + 116895137 MODEL JAAIVD010000001 trna 626056574 LOC116899814 small nucleolar RNA SNORD20 4 158487634 158487713 - 116899814 MODEL JAAIVD010000003;XR_004387814 snorna 626056577 Gpalpp1 GPALPP motifs containing 1 12 48298892 48316542 + 116913471 MODEL JAAIVD010000007;XM_032917673 XP_032773564 GPALPP motifs-containing protein 1 protein-coding 626056589 Ifngr2 interferon gamma receptor 2 ENCODES a protein that exhibits type II interferon receptor activity (ortholog); INVOLVED IN defense response to virus (ortholog); microglial cell activation (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); immunodeficiency 27A (ortholog); FOUND IN plasma membrane (ortholog) 4 53046545 53063701 - 22301074 116898993 MODEL JAAIVD010000003;XM_032900435 XP_032756326 protein-coding 626056600 LOC116898806 uncharacterized LOC116898806 4 20088138 20089473 - 116898806 MODEL JAAIVD010000003;XR_004387664 ncrna 626056604 LOC116892752 vomeronasal type-1 receptor 4-like 2 181193863 181195017 - 22301074;30032202 116892752 MODEL JAAIVD010000001;XM_032894629 XP_032750520 protein-coding 626056609 Slc26a4 solute carrier family 26 member 4 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); iodide transmembrane transporter activity (ortholog); INVOLVED IN inorganic anion transport (ortholog); iodide transport (ortholog); regulation of pH (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Acidoses (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 2 (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); extracellular exosome (ortholog) 7 44895952 44934239 - 22301074;30032202 116904953 MODEL JAAIVD010000026;XM_032907609 XP_032763500 pendrin protein-coding 626056633 Hes3 hes family bHLH transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN hindbrain morphogenesis (ortholog); in utero embryonic development (ortholog); midbrain development (ortholog) 1 8452034 8457280 + 22301074;30032202 116892295 MODEL JAAIVD010000025;XM_032893907;XR_004386937;XR_004386939 XP_032749798 transcription factor HES-3 protein-coding 626056648 LOC116888292 protein SEC13 homolog X 108593653 108595374 + 116888292 MODEL JAAIVD010000014 pseudo 626056649 Msto1 misato mitochondrial distribution and morphology regulator 1 INVOLVED IN mitochondrion distribution (ortholog); mitochondrion organization (ortholog); positive regulation of mitochondrial fusion (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); genetic disease (ortholog); mitochondrial myopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 3 64765587 64769673 + 30032202 116896673 MODEL JAAIVD010000012;XM_032898043;XM_032898044 XP_032753934;XP_032753935 protein misato homolog 1 protein-coding 626056671 Prkag3 protein kinase AMP-activated non-catalytic subunit gamma 3 ENCODES a protein that exhibits AMP-activated protein kinase activity (ortholog); protein kinase binding (ortholog); protein kinase regulator activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of glycogen biosynthetic process (ortholog); regulation of glycolytic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); lipid metabolism disorder (ortholog); FOUND IN nucleotide-activated protein kinase complex (ortholog) 4 148160397 148167793 - 116898226 MODEL JAAIVD010000003;XM_032899582 XP_032755473 5'-AMP-activated protein kinase subunit gamma-3 protein-coding 626056687 Nol4l nucleolar protein 4 like FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 132733083 132853371 - 116902145 MODEL JAAIVD010000023;XM_032904474;XM_032904475;XM_032904476;XM_032904477 XP_032760365;XP_032760366;XP_032760367;XP_032760368 nucleolar protein 4-like protein-coding 626056710 Unc5a unc-5 netrin receptor A ENCODES a protein that exhibits netrin receptor activity (ortholog); INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); netrin-activated signaling pathway (ortholog); FOUND IN neuron projection membrane (ortholog); neuronal cell body membrane (ortholog); plasma membrane (ortholog) 14 73287406 73343104 + 22301074;30032202 116883496 MODEL JAAIVD010000009;XM_032884664;XM_032884666 XP_032740555;XP_032740557 netrin receptor UNC5A protein-coding 626056733 Clca4 chloride channel accessory 4 ENCODES a protein that exhibits chloride channel activity (ortholog); ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN chloride transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN plasma membrane (ortholog) 3 15877511 15897022 + 22301074;30032202 116896186 MODEL JAAIVD010000012;XM_032897226 XP_032753117 calcium-activated chloride channel regulator 4 protein-coding 626056751 LOC116903891 alpha-2-macroglobulin 6 25038281 25087676 - 22301074;30032202 116903891 MODEL JAAIVD010000024;XM_032906652 XP_032762543 protein-coding 626056790 LOC116892014 60S ribosomal protein L36-like 2 137353849 137354710 - 116892014 MODEL JAAIVD010000001 pseudo 626056791 LOC116905238 prothymosin alpha-like 1 148088687 148089038 - 116905238 MODEL JAAIVD010000025;XM_032908107 XP_032763998 protein-coding 626056795 LOC116906662 SUMO-conjugating enzyme UBC9-B-like 1 154203943 154204630 + 116906662 MODEL JAAIVD010000025 pseudo 626056796 LOC116895961 high mobility group protein B1-like 3 143168952 143190257 + 116895961 MODEL JAAIVD010000012 pseudo 626056797 Lhfpl5 LHFPL tetraspan subfamily member 5 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 67 (ortholog); Deafness (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); stereocilium bundle (ortholog) 18 5281882 5288971 - 30032202 116887344 MODEL JAAIVD010000013;XM_032888938 XP_032744829 LHFPL tetraspan subfamily member 5 protein protein-coding 626056804 Kcnh7 potassium voltage-gated channel subfamily H member 7 ENCODES a protein that exhibits heme binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN circadian rhythm (ortholog); potassium ion transport (ortholog) 5 40282253 40772031 - 22301074;30032202 116901453 MODEL JAAIVD010000023;XM_032903391;XM_032903392;XM_032903393;XM_032903394;XM_032903395;XM_032903396;XM_032903397 XP_032759282;XP_032759283;XP_032759284;XP_032759285;XP_032759286;XP_032759287;XP_032759288 protein-coding 626056841 LOC116889922 olfactory receptor 6C68-like 1 160731317 160732252 - 116889922 MODEL JAAIVD010000025 pseudo 626056842 LOC116900157 ATP-dependent RNA helicase DDX18-like 5 24865209 24867170 - 116900157 MODEL JAAIVD010000023 pseudo 626056843 Shh sonic hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); cholesterol-protein transferase activity (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); androgen metabolic process (ortholog); angiogenesis (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; forkhead class A signaling pathway; glypican signaling pathway; ASSOCIATED WITH acrocallosal syndrome (ortholog); Anorectal Malformations (ortholog); atrioventricular septal defect (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 6 157238760 157248931 - 22301074;30032202 116904238 MODEL JAAIVD010000024;XM_032907187 XP_032763078 sonic hedgehog protein protein-coding 626056850 LOC116888061 acyl-protein thioesterase 1-like X 88456827 88457279 - 116888061 MODEL JAAIVD010000014 pseudo 626056851 LOC116908215 sialin-like 8 72834557 72852125 - 22301074;30032202 116908215 MODEL JAAIVD010000027;XM_032911490 XP_032767381 protein-coding 626056860 Lin7c lin-7 cell polarity scaffold C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN morphogenesis of an epithelial sheet (ortholog); neurotransmitter secretion (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 5 88185026 88195889 + 30032202 116901727 MODEL JAAIVD010000023;XM_032903867 XP_032759758 lin-7 homolog C, crumbs cell polarity complex component;protein lin-7 homolog C protein-coding 626056869 LOC116883187 elongation factor 2-like 14 34478253 34513224 + 116883187 MODEL JAAIVD010000009 pseudo 626056870 LOC116890032 growth hormone-inducible transmembrane protein-like 1 200067964 200068999 + 116890032 MODEL JAAIVD010000025 pseudo 626056871 LOC116908853 keratin, type I cytoskeletal 42 9 59560318 59567582 - 22301074;30032202 116908853 MODEL JAAIVD010000002;XM_032912292 XP_032768183 protein-coding 626056882 LOC116912312 vomeronasal type-2 receptor 116-like 11 19047803 19067391 + 116912312 MODEL JAAIVD010000006 pseudo 626056883 Dctn1 dynactin subunit 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN axonal transport (ortholog); centriole-centriole cohesion (ortholog); establishment of mitotic spindle orientation (ortholog); PARTICIPATES IN mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); FOUND IN cell cortex (ortholog); cell leading edge (ortholog); centriolar subdistal appendage (ortholog) 6 63028636 63061274 - 30032202 116903617 MODEL JAAIVD010000024;XM_032906259;XM_032906260;XM_032906261;XM_032906263;XM_032906264;XM_032906265;XM_032906266;XM_032906267 XP_032762150;XP_032762151;XP_032762152;XP_032762154;XP_032762155;XP_032762156;XP_032762157;XP_032762158 protein-coding 626056936 B3galt5 beta-1,3-galactosyltransferase 5 INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog) 4 48355409 48393386 - 22301074;30032202 116898948 MODEL JAAIVD010000003;XM_032900366;XM_032900367 XP_032756257;XP_032756258 protein-coding 626056946 Myo1d myosin ID ENCODES a protein that exhibits actin filament binding (ortholog); calcium-dependent protein binding (ortholog); calmodulin binding (ortholog); INVOLVED IN early endosome to recycling endosome transport (ortholog); forebrain development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN apical dendrite (ortholog); axolemma (ortholog); axon (ortholog) 9 89659688 89932566 + 22301074;30032202 116908686 MODEL JAAIVD010000002;XM_032911997 XP_032767888 unconventional myosin-Id protein-coding 626056972 LOC116883951 solute carrier family 23 member 2-like 14 18452877 18461287 - 116883951 MODEL JAAIVD010000009 pseudo 626056973 LOC116899518 ATP synthase F(0) complex subunit C2, mitochondrial-like 4 148414139 148414713 + 116899518 MODEL JAAIVD010000003 pseudo 626056974 LOC116893629 methyltransferase-like protein 5 2 9082603 9083230 + 116893629 MODEL JAAIVD010000001 pseudo 626056975 C13H10orf71 chromosome 13 C10orf71 homolog INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle cell differentiation (ortholog); heart development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN Z disc (ortholog) 13 8376481 8381395 - 30032202 116915035 MODEL JAAIVD010000008;XM_032919440 XP_032775331 cardiac-enriched FHL2-interacting protein protein-coding 626056979 LOC116905787 ankyrin repeat domain-containing protein 49-like 7 91416051 91418337 + 116905787 MODEL JAAIVD010000026 pseudo 626056980 LOC116894997 small Cajal body-specific RNA 23 2 12039701 12039827 + 116894997 MODEL JAAIVD010000001;XR_004387187 ncrna 626056983 LOC116904784 small nucleolar RNA SNORD93 6 152922336 152922406 - 116904784 MODEL JAAIVD010000024;XR_004388448 snorna 626056986 Pabpc4l poly(A) binding protein cytoplasmic 4 like 3 107567224 107569215 + 30032202 116895500 MODEL JAAIVD010000012;XM_032896754 XP_032752645 polyadenylate-binding protein 4-like protein-coding 626056992 Fabp5 fatty acid binding protein 5 ENCODES a protein that exhibits fatty acid binding (ortholog); identical protein binding (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); Myocardial Ischemia (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog) 3 144084774 144088460 + 30032202 116897033 MODEL JAAIVD010000012;XM_032898653;XM_032898654 XP_032754544;XP_032754545 fatty acid-binding protein 5 protein-coding 626057004 Zfyve16 zinc finger FYVE-type containing 16 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN endosomal transport (ortholog); protein targeting to lysosome (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); dextrocardia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog) 3 203771877 203816427 + 22301074;30032202 116897298 MODEL JAAIVD010000012;XM_032899034;XM_032899035;XM_032899037 XP_032754925;XP_032754926;XP_032754928 zinc finger FYVE domain-containing protein 16 protein-coding 626057034 LOC116906032 eukaryotic translation initiation factor 3 subunit B-like 7 34750192 34912350 + 116906032 MODEL JAAIVD010000026 pseudo 626057035 Tmem182 transmembrane protein 182 INVOLVED IN myotube cell development involved in skeletal muscle regeneration (ortholog); myotube differentiation involved in skeletal muscle regeneration (ortholog); negative regulation of myoblast differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 4 117028515 117077569 + 22301074 116898154 MODEL JAAIVD010000003;XM_032899534 XP_032755425 protein-coding 626057044 Znf518b zinc finger protein 518B 11 66523359 66539133 + 30032202 116912409 MODEL JAAIVD010000006;XM_032916471 XP_032772362 protein-coding 626057051 Prg4 proteoglycan 4 INVOLVED IN hematopoietic stem cell proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); regulation of cell population proliferation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); camptodactyly-arthropathy-coxa vara-pericarditis syndrome (ortholog); Contracture (ortholog); FOUND IN extracellular space (ortholog) 10 29894498 29910845 - 22301074;30032202 116911514 MODEL JAAIVD010000005;XM_032915503 XP_032771394 protein-coding 626057067 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 3139247 3139317 + 116910812 MODEL JAAIVD010000002 trna 626057068 LOC116897088 baculoviral IAP repeat-containing protein 1a-like 3 157804414 157853031 - 30032202 116897088 MODEL JAAIVD010000012;XM_032898725 XP_032754616 protein-coding 626057088 LOC116887645 60S ribosomal protein L5-like 18 18240255 18240709 + 116887645 MODEL JAAIVD010000013 pseudo 626057089 Pnma1 PNMA family member 1 INVOLVED IN inflammatory response to antigenic stimulus (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 7 98233968 98235555 - 116905261 MODEL JAAIVD010000026;XM_032908114 XP_032764005 paraneoplastic antigen Ma1 protein-coding 626057094 LOC116895104 U2 spliceosomal RNA 2 30455647 30455747 + 116895104 MODEL JAAIVD010000001 pseudo 626057095 LOC116895202 late cornified envelope protein 1B-like 3 1417806 1418204 + 22301074 116895202 MODEL JAAIVD010000012;XM_032896542 XP_032752433 protein-coding 626057098 LOC116888750 peptidyl-prolyl cis-trans isomerase A-like X 30824123 30824811 - 22301074 116888750 MODEL JAAIVD010000014;XM_032890043 XP_032745934 protein-coding 626057102 LOC116900895 putative olfactory receptor 4A4 5 71290983 71297282 - 116900895 MODEL JAAIVD010000023 pseudo 626057103 Ppp1r8 protein phosphatase 1 regulatory subunit 8 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein phosphatase regulator activity (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cell population proliferation (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 1 25400867 25417469 + 22301074;30032202 116895380 MODEL JAAIVD010000025;XM_032896674 XP_032752565 nuclear inhibitor of protein phosphatase 1 protein-coding 626057114 Corin corin, serine peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); peptide hormone processing (ortholog); regulation of blood pressure (ortholog); PARTICIPATES IN atrial natriuretic peptide signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN actin cytoskeleton (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 11 29116664 29343929 - 22301074;30032202 116912296 MODEL JAAIVD010000006;XM_032916299;XM_032916300 XP_032772190;XP_032772191 atrial natriuretic peptide-converting enzyme protein-coding 626057144 LOC116888652 protein lin-28 homolog A-like 1 232542608 232546258 - 116888652 MODEL JAAIVD010000025 pseudo 626057145 LOC116913431 60S ribosomal protein L31 12 76234632 76235073 + 22301074;30032202 116913431 MODEL JAAIVD010000007;XM_032917623 XP_032773514 protein-coding 626057150 Slc6a13 solute carrier family 6 member 13 ENCODES a protein that exhibits amino acid binding (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN amino acid import across plasma membrane (ortholog); creatine transmembrane transport (ortholog); gamma-aminobutyric acid import (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 6 25397282 25434948 - 22301074;30032202 116903318 MODEL JAAIVD010000024;XM_032905752 XP_032761643 sodium- and chloride-dependent GABA transporter 2 protein-coding 626057169 Irf7 interferon regulatory factor 7 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); defense response to virus (ortholog); immunoglobulin mediated immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); immunodeficiency 39 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 8212787 8216240 + 22301074;30032202 116890878 MODEL JAAIVD010000001;XM_032891465;XM_032891466 XP_032747356;XP_032747357 protein-coding 626057185 LOC116914176 U6 spliceosomal RNA 12 49132480 49132586 + 116914176 MODEL JAAIVD010000007;XR_004389719 snrna 626057188 LOC116900308 olfactory receptor 8H1-like 5 64049670 64050618 - 116900308 MODEL JAAIVD010000023 pseudo 626057189 Upb1 beta-ureidopropionase 1 ENCODES a protein that exhibits beta-ureidopropionase activity (ortholog); protein homodimerization activity (ortholog); zinc ion binding (ortholog); INVOLVED IN beta-alanine biosynthetic process via 3-ureidopropionate (ortholog); beta-alanine metabolic process (ortholog); CMP catabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; beta-ureidopropionase deficiency pathway; carnosinemia pathway; ASSOCIATED WITH autistic disorder (ortholog); Beta-Ureidopropionase Deficiency (ortholog); celiac disease (ortholog); FOUND IN cytosol (ortholog) 18 12001863 12029161 - 30032202 116887047 MODEL JAAIVD010000013;XM_032888538 XP_032744429 beta-ureidopropionase protein-coding 626057202 LOC116893673 olfactory receptor 4D6 2 12215858 12216802 - 22301074 116893673 MODEL JAAIVD010000001;XM_032895389 XP_032751280 protein-coding 626057205 Catip ciliogenesis associated TTC17 interacting protein INVOLVED IN actin filament polymerization (ortholog); cilium organization (ortholog); ASSOCIATED WITH spermatogenic failure 54 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleus (ortholog) 4 147813925 147821785 + 30032202 116899498 MODEL JAAIVD010000003;XM_032901339;XM_032901340 XP_032757230;XP_032757231 ciliogenesis-associated TTC17-interacting protein protein-coding 626057223 LOC116913001 small nucleolar RNA SNORA17 11 26656279 26656403 - 116913001 MODEL JAAIVD010000006 pseudo 626057224 Spi1 Spi-1 proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anatomical structure regression (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN DNA modification pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); agammaglobulinemia (ortholog); agammaglobulinemia 10 (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 65264663 65283117 + 22301074;30032202 116901610 MODEL JAAIVD010000023;XM_032903647;XM_032903648 XP_032759538;XP_032759539 transcription factor PU.1 protein-coding 626057235 Sgsh N-sulfoglucosamine sulfohydrolase ENCODES a protein that exhibits N-sulfoglucosamine sulfohydrolase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Developmental Disabilities (ortholog); diarrhea (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) 9 64676741 64687923 + 30032202 116908818 MODEL JAAIVD010000002;XM_032912235 XP_032768126 N-sulphoglucosamine sulphohydrolase protein-coding 626057247 Ncs1 neuronal calcium sensor 1 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog); protein kinase binding (ortholog); INVOLVED IN positive regulation of calcium-mediated signaling (ortholog); positive regulation of exocytosis (ortholog); regulation of neuron projection development (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN axon (ortholog); calyx of Held (ortholog); cytoplasm (ortholog) 5 4337681 4387763 - 22301074;30032202 116901166 MODEL JAAIVD010000023;XM_032902813 XP_032758704 protein-coding 626057259 Tulp1 TUB like protein 1 ENCODES a protein that exhibits actin filament binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN dendrite development (ortholog); detection of light stimulus involved in visual perception (ortholog); eye photoreceptor cell development (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH brachydactyly (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN axon terminus (ortholog); cell projection (ortholog); cytosol (ortholog) 18 5496584 5509256 + 30032202 116887169 MODEL JAAIVD010000013;XM_032888720;XM_032888721 XP_032744611;XP_032744612 tubby-related protein 1 protein-coding 626057282 LOC116906695 charged multivesicular body protein 5-like 8 21056417 21057428 - 116906695 MODEL JAAIVD010000027 pseudo 626057283 Dhx34 DExH-box helicase 34 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); positive regulation of phosphorylation (ortholog); ASSOCIATED WITH Dwarfism (ortholog); epilepsy (ortholog); Neurodevelopmental Disorders (ortholog) 2 172854615 172879830 + 22301074;30032202 116892605 MODEL JAAIVD010000001;XM_032894401 XP_032750292 probable ATP-dependent RNA helicase DHX34 protein-coding 626057304 Plcz1 phospholipase C zeta 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate phospholipase C activity (ortholog); INVOLVED IN calcium ion transport (ortholog); egg activation (ortholog); positive regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH spermatogenic failure 17 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 9521627 9575968 + 22301074;30032202 116904525 MODEL JAAIVD010000024;XM_032907316 XP_032763207 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase zeta-1 protein-coding 626057319 LOC116888174 optic atrophy 3 protein homolog X 117133270 117133999 - 30032202 116888174 MODEL JAAIVD010000014;XM_032889495 XP_032745386 protein-coding 626057324 E2f6 E2F transcription factor 6 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH lung non-small cell carcinoma (ortholog); primary ciliary dyskinesia 40 (ortholog); Triple Negative Breast Neoplasms (ortholog); FOUND IN MLL1 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 36616256 36632697 + 22301074;30032202 116904894 MODEL JAAIVD010000026;XM_032907498;XM_032907499;XM_032907500 XP_032763389;XP_032763390;XP_032763391 transcription factor E2F6 protein-coding 626057342 LOC116895644 RNA-binding protein with serine-rich domain 1-like 3 179413765 179414644 - 116895644 MODEL JAAIVD010000012 pseudo 626057343 Lamtor5 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); glucose intolerance (ortholog); FOUND IN cytosol (ortholog); FNIP-folliculin RagC/D GAP (ortholog); lysosomal membrane (ortholog) 3 50966809 50971900 - 22301074;30032202 116896393 MODEL JAAIVD010000012;XM_032897524 XP_032753415 ragulator complex protein LAMTOR5 protein-coding 626057350 LOC116893975 formyl peptide receptor 2-like 2 100616064 100630562 - 30032202 116893975 MODEL JAAIVD010000001;XM_032895695 XP_032751586 protein-coding 626057356 LOC116900115 uncharacterized LOC116900115 1 58031281 58046786 + 116900115 MODEL JAAIVD010000025;XR_004387919 ncrna 626057364 LOC116909983 olfactory receptor 2M3-like 9 31839149 31840087 + 22301074 116909983 MODEL JAAIVD010000002;XM_032913766 XP_032769657 protein-coding 626057367 Sez6l seizure related 6 homolog like INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); synapse maturation (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 16 41401255 41558620 + 30032202 116885931 MODEL JAAIVD010000004;XM_032887242;XM_032887243;XM_032887244 XP_032743133;XP_032743134;XP_032743135 seizure 6-like protein protein-coding 626057396 LOC116898820 protein FAM162A-like 4 21024657 21038632 - 116898820 MODEL JAAIVD010000003 pseudo 626057397 Max MYC associated factor X ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); cellular response to starvation (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Hereditary Paraganglioma-Pheochromocytoma Syndromes (ortholog); lung small cell carcinoma (ortholog); FOUND IN chromatin (ortholog); dendrite (ortholog); Mad-Max complex (ortholog) 7 91069908 91095141 - 22301074;30032202 116905191 MODEL JAAIVD010000026;XM_032907982;XM_032907983;XR_004388494;XR_004388495 XP_032763873;XP_032763874 protein max protein-coding 626057416 LOC116894521 vomeronasal type-1 receptor 4-like 2 175009356 175010327 - 22301074;30032202 116894521 MODEL JAAIVD010000001;XM_032896222 XP_032752113 protein-coding 626057419 Cntn5 contactin 5 INVOLVED IN presynapse assembly (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic membrane (ortholog) 8 5905144 7071418 - 30032202 116907835 MODEL JAAIVD010000027;XM_032911019 XP_032766910 contactin-5 protein-coding 626057448 Ube2i ubiquitin conjugating enzyme E2 I ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); enzyme binding (ortholog); HLH domain binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered ubiquitin/proteasome degradation pathway; Alzheimer's disease pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); fibrillar center (ortholog) 9 2527191 2547175 - 30032202 116908679 MODEL JAAIVD010000002;XM_032911983;XM_032911984;XM_032911985;XM_032911986;XM_032911987;XM_032911988 XP_032767874;XP_032767875;XP_032767876;XP_032767877;XP_032767878;XP_032767879 SUMO-conjugating enzyme UBC9 protein-coding 626057474 Cacna2d2 calcium voltage-gated channel auxiliary subunit alpha2delta 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); muscle cell development (ortholog); neuromuscular junction development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Ataxia (ortholog); Cardiac Arrhythmias (ortholog); Cerebellar Atrophy with Seizures and Variable Developmental Delay (ortholog); FOUND IN GABA-ergic synapse (ortholog); presynaptic active zone membrane (ortholog); voltage-gated calcium channel complex (ortholog) 8 98714996 98845896 + 30032202 116907521 MODEL JAAIVD010000027;XM_032910526;XM_032910527;XM_032910528;XM_032910529;XM_032910530;XM_032910531;XM_032910532 XP_032766417;XP_032766418;XP_032766419;XP_032766420;XP_032766421;XP_032766422;XP_032766423 voltage-dependent calcium channel subunit alpha-2/delta-2 protein-coding 626057527 Herc3 HECT and RLD domain containing E3 ubiquitin protein ligase 3 ASSOCIATED WITH Liver Neoplasms (ortholog) 6 82985207 83073443 - 22301074 116903725 MODEL JAAIVD010000024;XM_032906406;XM_032906407 XP_032762297;XP_032762298 probable E3 ubiquitin-protein ligase HERC3 protein-coding 626057561 LOC116905581 egl nine homolog 1-like 7 415325 417442 + 116905581 MODEL JAAIVD010000026 pseudo 626057562 LOC116888103 high mobility group protein B4-like X 98350941 98362667 + 30032202 116888103 MODEL JAAIVD010000014;XM_032889463 XP_032745354 protein-coding 626057566 LOC116909611 olfactory receptor 2Y1-like 9 32130853 32131785 + 22301074 116909611 MODEL JAAIVD010000002;XM_032913233 XP_032769124 protein-coding 626057569 LOC116889748 vomeronasal type-2 receptor 116-like 116889748 MODEL JAAIVD010000077 pseudo 626057570 Lrrc26 leucine rich repeat containing 26 ENCODES a protein that exhibits potassium channel activator activity (ortholog); potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of voltage-gated potassium channel activity (ortholog); potassium ion transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 5 11894156 11895810 - 30032202 116901310 MODEL JAAIVD010000023;XM_032903120 XP_032759011 leucine-rich repeat-containing protein 26 protein-coding 626057576 Mat2b methionine adenosyltransferase 2 non-catalytic beta subunit ENCODES a protein that exhibits enzyme binding (ortholog); methionine adenosyltransferase regulator activity (ortholog); INVOLVED IN S-adenosylmethionine biosynthetic process (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; FOUND IN methionine adenosyltransferase complex (ortholog); nucleus (ortholog) 9 23612309 23627023 - 30032202 116909286 MODEL JAAIVD010000002;XM_032912823;XM_032912824 XP_032768714;XP_032768715 methionine adenosyltransferase 2 subunit beta;methionine adenosyltransferase 2B protein-coding 626057592 LOC116895873 histone deacetylase 1-like 3 105523455 105524612 + 116895873 MODEL JAAIVD010000012 pseudo 626057593 LOC116886798 U7 small nuclear RNA 17 22185615 22185680 - 116886798 MODEL JAAIVD010000011 pseudo 626057594 LOC116890297 U2 spliceosomal RNA 1 120304916 120305050 + 116890297 MODEL JAAIVD010000025 pseudo 626057595 LOC116889582 U6 spliceosomal RNA X 116294027 116294130 - 116889582 MODEL JAAIVD010000014;XR_004386498 snrna 626057598 LOC116894842 U6 spliceosomal RNA 2 67296295 67296401 - 116894842 MODEL JAAIVD010000001;XR_004387057 snrna 626057601 LOC116903589 ferritin light chain 1-like 6 44917796 44918901 - 116903589 MODEL JAAIVD010000024 pseudo 626057602 LOC116895965 uncharacterized LOC116895965 3 146744688 146828049 + 22301074;30032202 116895965 MODEL JAAIVD010000012;XM_032897012 XP_032752903 uncharacterized protein LOC116895965 protein-coding 626057635 LOC116903883 60S ribosomal protein L7a-like 6 94553248 94553972 + 116903883 MODEL JAAIVD010000024 pseudo 626057636 LOC116885682 speedy protein E4A 16 9919479 9927143 + 22301074;30032202 116885682 MODEL JAAIVD010000004;XM_032886988;XM_032886989;XM_032886990 XP_032742879;XP_032742880;XP_032742881 protein-coding 626057653 Syne3 spectrin repeat containing nuclear envelope family member 3 ENCODES a protein that exhibits actin filament binding (ortholog); cytoskeleton-nuclear membrane anchor activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); establishment of protein localization to membrane (ortholog); regulation of cell shape (ortholog); PARTICIPATES IN Huntington's disease pathway; ASSOCIATED WITH Huntington's disease (ortholog); FOUND IN meiotic nuclear membrane microtubule tethering complex (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 7 116023898 116107237 - 30032202 116905387 MODEL JAAIVD010000026;XM_032908332;XM_032908334 XP_032764223;XP_032764225 nesprin-3 protein-coding 626057677 LOC116893219 L-lactate dehydrogenase A chain-like 2 114656479 114657501 + 116893219 MODEL JAAIVD010000001 pseudo 626057678 LOC116887888 protein PPP4R3C-like X 50106513 50109127 - 116887888 MODEL JAAIVD010000014 pseudo 626057679 LOC116912301 tubulin polyglutamylase complex subunit 2-like 1 170306622 170307385 - 116912301 MODEL JAAIVD010000025 pseudo 626057680 LOC116888064 60S ribosomal protein L7-like X 88749204 88754215 - 116888064 MODEL JAAIVD010000014 pseudo 626057681 Mrpl55 mitochondrial ribosomal protein L55 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 3 66644961 66645348 + 22301074;30032202 116895433 MODEL JAAIVD010000012;XM_032896715 XP_032752606 39S ribosomal protein L55, mitochondrial protein-coding 626057684 Git2 GIT ArfGAP 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN calyx of Held (ortholog); nucleoplasm (ortholog); presynapse (ortholog) 16 39181284 39222929 + 22301074;30032202 116885941 MODEL JAAIVD010000004;XM_032887254;XM_032887255;XM_032887257;XM_032887258;XM_032887259;XM_032887260 XP_032743145;XP_032743146;XP_032743148;XP_032743149;XP_032743150;XP_032743151 ARF GTPase-activating protein GIT2 protein-coding 626057719 Kcna6 potassium voltage-gated channel subfamily A member 6 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); esophageal atresia (ortholog); Flatfoot (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytosol (ortholog) 6 21157788 21191522 + 22301074;2347305;30032202 116903240 MODEL JAAIVD010000024;X17621;XM_032905619 CAA35622;XP_032761510 protein-coding 626057725 Ppp6r2 protein phosphatase 6 regulatory subunit 2 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 4B3 (ortholog); prostate cancer (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 1 258513807 258586397 + 22301074;30032202 116915046 MODEL JAAIVD010000025;XM_032919460;XM_032919468 XP_032775351;XP_032775359 serine/threonine-protein phosphatase 6 regulatory subunit 2 protein-coding 626057761 LOC116889932 olfactory receptor 10A4-like 1 161035815 161036777 + 22301074 116889932 MODEL JAAIVD010000025;XM_032890744 XP_032746635 protein-coding 626057764 Fam131b family with sequence similarity 131 member B ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 6 97894595 97903828 + 116903897 MODEL JAAIVD010000024;XM_032906661;XM_032906663 XP_032762552;XP_032762554 protein FAM131B protein-coding 626057778 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72219069 72219140 - 116914211 MODEL JAAIVD010000007 trna 626057779 Usb1 U6 snRNA biogenesis phosphodiesterase 1 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(U)-specific exoribonuclease activity, producing 3' uridine cyclic phosphate ends (ortholog); INVOLVED IN RNA splicing (ortholog); snRNA 3'-end processing (ortholog); U6 snRNA 3'-end processing (ortholog); ASSOCIATED WITH genetic disease (ortholog); poikiloderma with neutropenia (ortholog); FOUND IN intercellular bridge (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 2193571 2205679 + 22301074;30032202 116886118 MODEL JAAIVD010000011;XM_032887456 XP_032743347 U6 snRNA phosphodiesterase protein-coding 626057790 Procr protein C receptor INVOLVED IN negative regulation of coagulation (ortholog); PARTICIPATES IN protease mediated signaling via protease-activated receptor 1; protein C anticoagulant pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN centrosome (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 5 135102773 135107251 + 30032202 116902190 MODEL JAAIVD010000023;XM_032904555 XP_032760446 endothelial protein C receptor protein-coding 626057798 Ssr1 signal sequence receptor subunit 1 FOUND IN endoplasmic reticulum (ortholog) 14 57017742 57034807 - 22301074;30032202 116883322 MODEL JAAIVD010000009;XM_032884388;XM_032884389 XP_032740279;XP_032740280 translocon-associated protein subunit alpha protein-coding 626057814 Tpcn1 two pore segment channel 1 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly phosphatidylinositol-3,5-bisphosphate-gated monatomic cation channel activity (ortholog); ligand-gated sodium channel activity (ortholog); INVOLVED IN endocytosis involved in viral entry into host cell (ortholog); positive regulation of autophagy (ortholog); sodium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH oligospermia (ortholog); FOUND IN early endosome membrane (ortholog); endolysosome (ortholog); endosome membrane (ortholog) 16 33237316 33293989 + 22301074;30032202 116885227 MODEL JAAIVD010000004;XM_032886463 XP_032742354 two pore calcium channel protein 1 protein-coding 626057845 Slc18a1 solute carrier family 18 member A1 ENCODES a protein that exhibits enzyme binding (ortholog); monoamine:proton antiporter activity (ortholog); serotonin:sodium:chloride symporter activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); dopamine uptake (ortholog); negative regulation of serotonin uptake (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); schizophrenia (ortholog); von Hippel-Lindau disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); secretory granule membrane (ortholog); synapse (ortholog) 13 20369625 20400078 + 22301074;30032202 116914753 MODEL JAAIVD010000008;XM_032919200;XM_032919202 XP_032775091;XP_032775093 chromaffin granule amine transporter protein-coding 626057869 LOC116889816 bcl-2-like protein 1 116889816 MODEL JAAIVD010001181 pseudo 626057870 Lgi2 leucine rich repeat LGI family member 2 INVOLVED IN inhibitory synapse assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog) 11 53568697 53596249 + 22301074;30032202 116912663 MODEL JAAIVD010000006;XM_032916782 XP_032772673 leucine-rich repeat LGI family member 2 protein-coding 626057882 Hpse heparanase ENCODES a protein that exhibits heparanase activity (ortholog); syndecan binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); cell-matrix adhesion (ortholog); establishment of endothelial barrier (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); IgA glomerulonephritis (ortholog); FOUND IN extracellular space (ortholog); heparanase complex (ortholog); lysosome (ortholog) 11 10905095 10945127 - 22301074;30032202 116912609 MODEL JAAIVD010000006;XM_032916734 XP_032772625 protein-coding 626057898 LOC116913906 ubiquitin-like 12 26254372 26259800 - 116913906 MODEL JAAIVD010000007 pseudo 626057899 Spata31g1 SPATA31 subfamily G member 1 1 3532233 3536192 - 116888367 MODEL JAAIVD010000025;XM_032889638 XP_032745529 C1H9orf131 chromosome 1 C9orf131 homolog;uncharacterized protein C9orf131 homolog protein-coding 626057903 Kcnmb2 potassium calcium-activated channel subfamily M regulatory beta subunit 2 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN action potential (ortholog); detection of calcium ion (ortholog); neuronal action potential (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 3 122802093 123088537 - 22301074;30032202 116896970 MODEL JAAIVD010000012;XM_032898549 XP_032754440 calcium-activated potassium channel subunit beta-2 protein-coding 626057912 LOC116893502 vomeronasal type-2 receptor 116-like 2 185909955 185915465 + 116893502 MODEL JAAIVD010000001 pseudo 626057913 LOC116902834 60S ribosomal protein L31-like 6 88969841 88970214 - 116902834 MODEL JAAIVD010000024 pseudo 626057914 LOC116911629 60S ribosomal protein L15-like 10 32867968 32873465 + 116911629 MODEL JAAIVD010000005 pseudo 626057915 Ppp1r14c protein phosphatase 1 regulatory inhibitor subunit 14C ENCODES a protein that exhibits protein serine/threonine phosphatase inhibitor activity (ortholog); ASSOCIATED WITH Coronavirus infectious disease (ortholog); FOUND IN membrane (ortholog) 2 198208471 198260504 + 22301074;30032202 116892881 MODEL JAAIVD010000001;XM_032894792 XP_032750683 protein phosphatase 1 regulatory subunit 14C protein-coding 626057923 LOC116889830 secreted seminal-vesicle Ly-6 protein 1-like 116889830 MODEL JAAIVD010001422;XM_032890665 XP_032746556 protein-coding 626057924 Pdzd7 PDZ domain containing 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN auditory receptor cell development (ortholog); auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 57 (ortholog); fundus dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); nucleoplasm (ortholog) 2 44533095 44552284 - 22301074;30032202 116891222 MODEL JAAIVD010000001;XM_032892061 XP_032747952 PDZ domain-containing protein 7 protein-coding 626057945 Dcn decorin ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN kidney development (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of endothelial cell migration (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH asthma (ortholog); breast carcinoma (ortholog); congenital stromal corneal dystrophy (ortholog); FOUND IN collagen type VI trimer (ortholog) 1 176687193 176726254 + 22301074;2764879;30032202 116908528 MODEL JAAIVD010000025;XM_032911714;Z12298 CAA78170;XP_032767605 dermatan sulfate proteoglycan-II (decorin) protein-coding 626057957 Rusc2 RUN and SH3 domain containing 2 ENCODES a protein that exhibits small GTPase binding (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 61 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 1 3072984 3117018 - 22301074;30032202 116891108 MODEL JAAIVD010000025;XM_032891824 XP_032747715 iporin protein-coding 626057973 LOC116891864 zinc finger protein 2-like 2 112758706 112784353 + 30032202 116891864 MODEL JAAIVD010000001;XM_032893264 XP_032749155 protein-coding 626057983 LOC116909942 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like 9 67323646 67332676 + 22301074;30032202 116909942 MODEL JAAIVD010000002;XM_032913716 XP_032769607 protein-coding 626057996 LOC116897565 small nucleolar RNA SNORA17 3 35252959 35253109 - 116897565 MODEL JAAIVD010000012 pseudo 626057997 Kiaa1958 KIAA1958 ortholog ASSOCIATED WITH COVID-19 (ortholog) 1 91662943 91799745 - 116901485 MODEL JAAIVD010000025;XM_032903446;XM_032903455 XP_032759337;XP_032759346 uncharacterized protein KIAA1958 homolog protein-coding 626058010 LOC116894934 small nucleolar RNA SNORD115 2 140305192 140305269 - 116894934 MODEL JAAIVD010000001;XR_004387133 snorna 626058013 Ush1c USH1 protein network component harmonin ENCODES a protein that exhibits myosin tail binding (ortholog); spectrin binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); brush border assembly (ortholog); equilibrioception (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Autosomal Recessive Nonsyndromic Deafness 18 (ortholog); autosomal recessive nonsyndromic deafness 18A (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) 2 153261489 153309693 + 22301074;30032202 116892108 MODEL JAAIVD010000001;XM_032893586 XP_032749477 harmonin protein-coding 626058044 Cope coat protein complex I subunit epsilon INVOLVED IN protein localization to axon (ortholog); FOUND IN COPI-coated vesicle (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 13 12560688 12571013 + 22301074;30032202 116914668 MODEL JAAIVD010000008;XM_032919073 XP_032774964 COPI coat complex subunit epsilon;coatomer subunit epsilon protein-coding 626058058 LOC116913856 eukaryotic translation initiation factor 1-like 12 87084998 87085372 - 116913856 MODEL JAAIVD010000007 pseudo 626058059 LOC116894717 junctional adhesion molecule A-like 2 2424071 2425830 - 30032202 116894717 MODEL JAAIVD010000001;XM_032896415 XP_032752306 protein-coding 626058063 Gypc glycophorin C (Gerbich blood group) ASSOCIATED WITH atrial fibrillation (ortholog); malaria (ortholog); FOUND IN cortical cytoskeleton (ortholog); membrane (ortholog); plasma membrane (ortholog) 15 11686449 11720540 + 30032202 116884484 MODEL JAAIVD010000010;XM_032885600 XP_032741491 glycophorin-C protein-coding 626058070 Smpd4 sphingomyelin phosphodiesterase 4 ENCODES a protein that exhibits sphingomyelin phosphodiesterase activity (ortholog); sphingomyelin phosphodiesterase D activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); ceramide biosynthetic process (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, ARTHROGRYPOSIS, AND STRUCTURAL BRAIN ANOMALIES (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); nuclear envelope (ortholog) 4 2867196 2890726 + 22301074;30032202 116898648 MODEL JAAIVD010000003;XM_032899875 XP_032755766 protein-coding 626058093 Ccdc182 coiled-coil domain containing 182 INVOLVED IN female gonad development (ortholog) 9 82515095 82515896 - 116908684 MODEL JAAIVD010000002;XM_032911995 XP_032767886 coiled-coil domain-containing protein 182 protein-coding 626058098 LOC116887139 sodium-dependent glucose transporter 1C-like 18 39760445 39765186 - 116887139 MODEL JAAIVD010000013;XM_032888688 XP_032744579 protein-coding 626058105 LOC116902902 elongin-B-like 6 106888752 106889083 - 116902902 MODEL JAAIVD010000024 pseudo 626058106 Gpr137c G protein-coupled receptor 137C FOUND IN lysosomal membrane (ortholog) 12 77759771 77816853 - 30032202 116913757 MODEL JAAIVD010000007;XM_032918064 XP_032773955 integral membrane protein GPR137C protein-coding 626058116 LOC116914961 ral guanine nucleotide dissociation stimulator-like 13 14514316 14515954 + 116914961 MODEL JAAIVD010000008 pseudo 626058117 Tdrp testis development related protein INVOLVED IN spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 13 69799477 69822736 + 22301074;30032202 116914711 MODEL JAAIVD010000008;XM_032919141;XM_032919142 XP_032775032;XP_032775033 testis development-related protein protein-coding 626058128 LOC116883795 uncharacterized LOC116883795 14 30387142 30390218 + 116883795 MODEL JAAIVD010000009;XR_004385787 ncrna 626058133 Usp12 ubiquitin specific peptidase 12 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN protein deubiquitination (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 16 7095791 7150125 + 22301074;30032202 116885168 MODEL JAAIVD010000004;XM_032886383 XP_032742274 ubiquitin carboxyl-terminal hydrolase 12 protein-coding 626058146 LOC116887558 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9204206 9205545 + 116887558 MODEL JAAIVD010000013 pseudo 626058147 Tmem278 transmembrane protein 278 1 4844234 4846391 + 30032202 116891757 MODEL JAAIVD010000025;XM_032893082 XP_032748973 Tmem88b transmembrane protein 88B protein-coding 626058153 Mospd2 motile sperm domain containing 2 ENCODES a protein that exhibits FFAT motif binding (ortholog); INVOLVED IN lipid droplet formation (ortholog); positive regulation of monocyte chemotaxis (ortholog); positive regulation of neutrophil chemotaxis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-endosome membrane contact site (ortholog) X 25482589 25524367 - 116888514 MODEL JAAIVD010000014;XM_032889814 XP_032745705 motile sperm domain-containing protein 2 protein-coding 626058173 LOC116902836 taste receptor type 2 member 125 6 15880571 15881506 + 22301074;30032202 116902836 MODEL JAAIVD010000024;XM_032905166 XP_032761057 protein-coding 626058177 LOC116906348 small nucleolar RNA SNORA70 7 38385883 38385998 + 116906348 MODEL JAAIVD010000026 pseudo 626058178 LOC116910758 small nucleolar RNA U3 9 50307936 50308141 - 116910758 MODEL JAAIVD010000002;XR_004389269 snorna 626058181 LOC116887942 elongation factor 1-alpha 1-like X 62262671 62266401 + 116887942 MODEL JAAIVD010000014 pseudo 626058182 LOC116887209 olfactory receptor 2A12-like 1 38223991 38224997 + 22301074 116887209 MODEL JAAIVD010000025;XM_032888770 XP_032744661 protein-coding 626058185 Mrps18a mitochondrial ribosomal protein S18A FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 4 83737688 83754599 - 22301074;30032202 116899124 MODEL JAAIVD010000003;XM_032900649 XP_032756540 39S ribosomal protein S18a, mitochondrial protein-coding 626058195 Ints3 integrator complex subunit 3 INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 3 63187558 63237755 + 30032202 116896607 MODEL JAAIVD010000012;XM_032897859 XP_032753750 protein-coding 626058229 Ifnb1 interferon beta 1 ENCODES a protein that exhibits chloramphenicol O-acetyltransferase activity (ortholog); cytokine activity (ortholog); cytokine receptor binding (ortholog); INVOLVED IN adaptive immune response (ortholog); antiviral innate immune response (ortholog); B cell activation involved in immune response (ortholog); ASSOCIATED WITH amelanotic melanoma (ortholog); anus benign neoplasm (ortholog); Aortic Remodeling (ortholog); FOUND IN extracellular space (ortholog) 1 123731938 123732492 + 22301074;30032202 116889183 MODEL JAAIVD010000025;XM_032890347 XP_032746238 interferon beta protein-coding 626058232 Nkx2-6 NK2 homeobox 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); digestive tract development (ortholog); embryonic heart tube development (ortholog); ASSOCIATED WITH cerebral palsy (ortholog); Conotruncal Cardiac Defects (ortholog); familial atrial fibrillation (ortholog) 12 54955203 54959513 - 22301074;30032202 116913940 MODEL JAAIVD010000007;XM_032918206 XP_032774097 homeobox protein Nkx-2.6 protein-coding 626058237 LOC116906451 small nucleolar RNA SNORA17 7 46812178 46812307 - 116906451 MODEL JAAIVD010000026;XR_004388708 snorna 626058240 LOC116883671 prolactin-8A4-like 14 46345477 46351957 + 22301074;30032202 116883671 MODEL JAAIVD010000009;XM_032884868;XM_032884869;XM_032884870 XP_032740759;XP_032740760;XP_032740761 protein-coding 626058257 LOC116898597 tRNA-splicing endonuclease subunit Sen2-like 4 180663955 180664675 + 116898597 MODEL JAAIVD010000003 pseudo 626058258 LOC116904376 mitochondrial import receptor subunit TOM20 homolog 6 89573535 89579104 - 116904376 MODEL JAAIVD010000024 pseudo 626058259 LOC116894729 cytochrome P450 2B1-like 2 42763430 42797319 - 22301074;30032202 116894729 MODEL JAAIVD010000001;XM_032896417 XP_032752308 protein-coding 626058269 Bbc3 BCL2 binding component 3 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH brain ischemia (ortholog); Burkitt lymphoma (ortholog); Esophageal Neoplasms (ortholog); FOUND IN lysosome (ortholog); mitochondrion (ortholog) 2 172743801 172752099 - 22301074;30032202 116892600 MODEL JAAIVD010000001;XM_032894380;XM_032894381;XM_032894382 XP_032750271;XP_032750272;XP_032750273 bcl-2-binding component 3 protein-coding 626058283 LOC116895221 exosome complex component RRP41-like 3 15313521 15317452 - 116895221 MODEL JAAIVD010000012 pseudo 626058284 Fgfr3 fibroblast growth factor receptor 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); axonogenesis involved in innervation (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); absence epilepsy (ortholog); acanthosis nigricans (ortholog); FOUND IN cell surface (ortholog); cytoplasmic side of plasma membrane (ortholog); endoplasmic reticulum (ortholog) 11 71102760 71117463 - 22301074;30032202 116912201 MODEL JAAIVD010000006;XM_032916139;XM_032916140;XM_032916141 XP_032772030;XP_032772031;XP_032772032 protein-coding 626058311 LOC116886779 U4 spliceosomal RNA 17 21319531 21319671 + 116886779 MODEL JAAIVD010000011;XR_004386174 snrna 626058314 LOC116893931 60S ribosomal protein L31 2 85116385 85116836 - 22301074;30032202 116893931 MODEL JAAIVD010000001;XM_032895649 XP_032751540 protein-coding 626058319 Arhgap20 Rho GTPase activating protein 20 ASSOCIATED WITH prostate cancer (ortholog) 14 54717427 54798953 - 22301074;30032202 116883988 MODEL JAAIVD010000009;XM_032885224 XP_032741115 rho GTPase-activating protein 20 protein-coding 626058338 Atoh1 atonal bHLH transcription factor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN auditory receptor cell fate determination (ortholog); auditory receptor cell fate specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 89 (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) 6 77939477 77941402 - 22301074 116903718 MODEL JAAIVD010000024;XM_032906393 XP_032762284 protein atonal homolog 1 protein-coding 626058343 Defb135 defensin beta 135 12 61331573 61333435 + 22301074 116913110 MODEL JAAIVD010000007;XM_032917252 XP_032773143 beta-defensin 135 protein-coding 626058349 LOC116886369 uncharacterized LOC116886369 17 25002844 25003486 - 116886369 MODEL JAAIVD010000011;XR_004386101 ncrna 626058353 LOC116909408 hemoglobin subunit theta-1-like 9 3562404 3563034 - 22301074;30032202 116909408 MODEL JAAIVD010000002;XM_032912975 XP_032768866 protein-coding 626058358 Fig4 FIG4 phosphoinositide 5-phosphatase ENCODES a protein that exhibits phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); phosphatidylinositol-4-phosphate phosphatase activity (ortholog); INVOLVED IN locomotory behavior (ortholog); myelin assembly (ortholog); negative regulation of myelination (ortholog); PARTICIPATES IN inositol metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 11 (ortholog); FOUND IN endosome membrane (ortholog); lipid droplet (ortholog); recycling endosome (ortholog) 18 40904401 41019416 - 30032202 116887006 MODEL JAAIVD010000013;XM_032888490 XP_032744381 polyphosphoinositide phosphatase protein-coding 626058385 Hsd17b4 hydroxysteroid 17-beta dehydrogenase 4 ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 17-beta-hydroxysteroid dehydrogenase (NAD+) activity (ortholog); 3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); androgen metabolic process (ortholog); estrogen metabolic process (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH COVID-19 (ortholog); D-bifunctional protein deficiency (ortholog); genetic disease (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) 15 36436787 36519106 - 30032202 116884438 MODEL JAAIVD010000010;XM_032885529 XP_032741420 peroxisomal multifunctional enzyme type 2 protein-coding 626058412 Atp12a ATPase H+/K+ transporting non-gastric alpha2 subunit ENCODES a protein that exhibits P-type potassium:proton transporter activity (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN potassium ion homeostasis (ortholog); regulation of pH (ortholog); response to metal ion (ortholog); ASSOCIATED WITH hypokalemia (ortholog); Metabolic Syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 12 68460537 68484977 - 22301074;30032202 116913418 MODEL JAAIVD010000007;XM_032917603 XP_032773494 potassium-transporting ATPase alpha chain 2 protein-coding 626058439 Insyn1 inhibitory synaptic factor 1 INVOLVED IN chemical synaptic transmission, postsynaptic (ortholog); inhibitory postsynaptic potential (ortholog); postsynaptic specialization organization (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic specialization (ortholog) 8 52360033 52374497 + 30032202 116906713 MODEL JAAIVD010000027;XM_032909519 XP_032765410 protein-coding 626058446 Hk3 hexokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); fructokinase activity (ortholog); glucokinase activity (ortholog); INVOLVED IN fructose 6-phosphate metabolic process (ortholog); glucose 6-phosphate metabolic process (ortholog); negative regulation of hydrogen peroxide-mediated programmed cell death (ortholog); PARTICIPATES IN glycolysis pathway; ASSOCIATED WITH liver disease (ortholog); long QT syndrome (ortholog); FOUND IN protein-containing complex (ortholog) 14 73343081 73358209 - 22301074;30032202 116883495 MODEL JAAIVD010000009;XM_032884661;XM_032884662;XM_032884663 XP_032740552;XP_032740553;XP_032740554 hexokinase-3 protein-coding 626058476 LOC116896791 choline-phosphate cytidylyltransferase A-like 3 85823301 85824385 + 116896791 MODEL JAAIVD010000012 pseudo 626058477 LOC116904378 collagen alpha-1(I) chain-like 6 90986931 90987974 + 116904378 MODEL JAAIVD010000024;XM_032907250 XP_032763141 protein-coding 626058481 Trmt5 tRNA methyltransferase 5 INVOLVED IN mitochondrial tRNA methylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 26 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 7 87534077 87540890 - 30032202 116905157 MODEL JAAIVD010000026;XM_032907929 XP_032763820 tRNA (guanine(37)-N1)-methyltransferase protein-coding 626058490 Rgs7 regulator of G protein signaling 7 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH Experimental Seizures (ortholog); intellectual disability (ortholog); morphine dependence (ortholog); FOUND IN cell tip (ortholog); cytosol (ortholog); dendrite (ortholog) 10 53610007 53800301 - 22301074;30032202 116911708 MODEL JAAIVD010000005;XM_032915673;XM_032915674;XM_032915675;XM_032915676 XP_032771564;XP_032771565;XP_032771566;XP_032771567 regulator of G-protein signaling 7 protein-coding 626058518 Cops4 COP9 signalosome subunit 4 INVOLVED IN protein deneddylation (ortholog); FOUND IN cell junction (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 11 10740019 10771053 + 30032202 116912251 MODEL JAAIVD010000006;XM_032916235;XM_032916236;XM_032916237 XP_032772126;XP_032772127;XP_032772128 COP9 signalosome complex subunit 4 protein-coding 626058539 Adtrp androgen dependent TFPI regulating protein ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to oxidised low-density lipoprotein particle stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); membrane (ortholog) 14 60753490 60816169 - 22301074;30032202 116883846 MODEL JAAIVD010000009;XM_032885110;XM_032885111 XP_032741001;XP_032741002 androgen-dependent TFPI-regulating protein protein-coding 626058554 Gria4 glutamate ionotropic receptor AMPA type subunit 4 ENCODES a protein that exhibits AMPA glutamate receptor activity (ortholog); glutamate-gated receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); modulation of chemical synaptic transmission (ortholog); negative regulation of smooth muscle cell apoptotic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite (ortholog); dendritic spine (ortholog) 8 1359500 1516201 + 22301074;30032202 116906797 MODEL JAAIVD010000027;XM_032909664;XM_032909665;XM_032909666;XM_032909667;XM_032909668;XM_032909669;XR_004388770 XP_032765555;XP_032765556;XP_032765557;XP_032765558;XP_032765559;XP_032765560 glutamate receptor 4 protein-coding 626058591 Ddx28 DEAD-box helicase 28 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); FOUND IN cytosol (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 17 25755419 25757393 - 22301074;30032202 116886261 MODEL JAAIVD010000011;XM_032887683 XP_032743574 probable ATP-dependent RNA helicase DDX28 protein-coding 626058596 LOC116885104 small nucleolar RNA SNORA62/SNORA6 family 15 78636725 78636870 - 116885104 MODEL JAAIVD010000010;XR_004385969 snorna 626058599 Greb1 growth regulating estrogen receptor binding 1 ASSOCIATED WITH endometriosis (ortholog); Prostatic Neoplasms (ortholog) 7 36469837 36556664 - 30032202 116904893 MODEL JAAIVD010000026;XM_032907497 XP_032763388 protein GREB1 protein-coding 626058636 Exo5 exonuclease 5 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 36085469 36088734 + 22301074;30032202 116897249 MODEL JAAIVD010000025;XM_032898982 XP_032754873 exonuclease V protein-coding 626058642 LOC116894247 olfactory receptor 14C36-like 2 114596433 114597371 - 22301074 116894247 MODEL JAAIVD010000001;XM_032895953 XP_032751844 protein-coding 626058645 Smpdl3a sphingomyelin phosphodiesterase acid like 3A ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of cGAS/STING signaling pathway (ortholog); nucleoside triphosphate catabolic process (ortholog); sphingomyelin catabolic process (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 18 34469674 34487429 + 22301074 116887234 MODEL JAAIVD010000013;XM_032888794 XP_032744685 acid sphingomyelinase-like phosphodiesterase 3a protein-coding 626058657 Hacd3 3-hydroxyacyl-CoA dehydratase 3 ENCODES a protein that exhibits enzyme binding (ortholog); very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity (ortholog); INVOLVED IN fatty acid elongation (ortholog); JNK cascade (ortholog); negative regulation of intracellular signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear membrane (ortholog) 8 59289275 59325361 - 30032202 116908151 MODEL JAAIVD010000027;XM_032911454 XP_032767345 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3 protein-coding 626058672 LOC116914009 D-3-phosphoglycerate dehydrogenase-like 12 34433219 34434820 - 22301074;30032202 116914009 MODEL JAAIVD010000007;XM_032918280 XP_032774171 protein-coding 626058675 Fam50b family with sequence similarity 50 member B FOUND IN intercellular bridge (ortholog); midbody (ortholog); nucleoplasm (ortholog) 14 53254870 53262541 + 30032202 116884029 MODEL JAAIVD010000009;XM_032885263 XP_032741154 protein FAM50B protein-coding 626058681 Omd osteomodulin FOUND IN extracellular matrix (ortholog) 14 68570268 68578509 + 22301074;30032202 116915221 MODEL JAAIVD010000009;XM_032919609 XP_032775500 protein-coding 626058688 LOC116906299 uncharacterized LOC116906299 7 11287972 11316780 - 116906299 MODEL JAAIVD010000026;XR_004388591 ncrna 626058692 Tsr1 TSR1 ribosome maturation factor ASSOCIATED WITH primary microcephaly (ortholog) 9 93634194 93644649 + 22301074;30032202 116910546 MODEL JAAIVD010000002;XM_032914453 XP_032770344 pre-rRNA-processing protein TSR1 homolog protein-coding 626058710 LOC116897783 microtubule-associated serine/threonine-protein kinase 2-like 4 8161068 8170626 - 116897783 MODEL JAAIVD010000003 pseudo 626058711 LOC116901195 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 5 6127318 6127606 + 116901195 MODEL JAAIVD010000023;XM_032902887 XP_032758778 protein-coding 626058715 Meis1 Meis homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); blood vessel morphogenesis (ortholog); cell growth involved in cardiac muscle cell development (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Cardiomegaly (ortholog); heart disease (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 11 87166329 87306935 - 30032202 116912337 MODEL JAAIVD010000006;XM_032916384;XM_032916385;XM_032916386 XP_032772275;XP_032772276;XP_032772277 homeobox protein Meis1 protein-coding 626058739 LOC116911881 U6 spliceosomal RNA 10 77723552 77723661 + 116911881 MODEL JAAIVD010000005;XR_004389395 snrna 626058742 Smim12 small integral membrane protein 12 FOUND IN mitochondrion (ortholog) 1 31034365 31038115 - 116896438 MODEL JAAIVD010000025;XM_032897592;XM_032897600 XP_032753483;XP_032753491 protein-coding 626058750 Znf248 zinc finger protein 248 6 28295862 28318419 + 30032202 116903349 MODEL JAAIVD010000024;XM_032905812;XM_032905813;XM_032905815;XM_032905816;XM_032905817;XM_032905818;XM_032905819 XP_032761703;XP_032761704;XP_032761706;XP_032761707;XP_032761708;XP_032761709;XP_032761710 protein-coding 626058775 Disp1 dispatched RND transporter family member 1 ENCODES a protein that exhibits molecular carrier activity (ortholog); INVOLVED IN determination of left/right symmetry (ortholog); diaphragm development (ortholog); dorsal/ventral pattern formation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH esophageal atresia (ortholog); gastrointestinal stromal tumor (ortholog); holoprosencephaly (ortholog) 10 61329600 61463232 - 22301074 116911100 MODEL JAAIVD010000005;XM_032914930;XM_032914932;XM_032914933;XM_032914934 XP_032770821;XP_032770823;XP_032770824;XP_032770825 protein dispatched homolog 1 protein-coding 626058796 LOC116889233 prohibitin-like X 22924902 22925712 - 22301074;30032202 116889233 MODEL JAAIVD010000014;XM_032890384 XP_032746275 protein-coding 626058799 Vrtn vertebrae development associated INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 7 98756116 98758384 + 30032202 116904926 MODEL JAAIVD010000026;XM_032907555;XM_032907556 XP_032763446;XP_032763447 vertnin protein-coding 626058806 Prpf40a pre-mRNA processing factor 40A ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN cell migration (ortholog); cytoskeleton organization (ortholog); regulation of cell shape (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleus (ortholog) 5 30899009 30954217 - 22301074;30032202 116901410 MODEL JAAIVD010000023;XM_032903290;XM_032903291;XM_032903292;XM_032903293;XM_032903294;XM_032903295;XM_032903297;XM_032903298 XP_032759181;XP_032759182;XP_032759183;XP_032759184;XP_032759185;XP_032759186;XP_032759188;XP_032759189 pre-mRNA processing factor 40 homolog A;pre-mRNA-processing factor 40 homolog A protein-coding 626058852 LOC116914516 poly(rC)-binding protein 2-like 13 58762132 58763286 - 30032202 116914516 MODEL JAAIVD010000008;XM_032918847 XP_032774738 protein-coding 626058856 Nck2 NCK adaptor protein 2 ENCODES a protein that exhibits phosphotyrosine residue binding (ortholog); protein-containing complex binding (ortholog); scaffold protein binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Alzheimer's disease (ortholog); nephrotic syndrome (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); postsynaptic density (ortholog) 4 119708534 119746255 + 22301074;30032202 116899345 MODEL JAAIVD010000003;XM_032901033 XP_032756924 cytoplasmic protein NCK2 protein-coding 626058863 Smchd1 structural maintenance of chromosomes flexible hinge domain containing 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); dosage compensation by inactivation of X chromosome (ortholog); inactivation of paternal X chromosome by genomic imprinting (ortholog); ASSOCIATED WITH Anosmia (ortholog); Arhinia, Choanal Atresia, and Microphthalmia (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN Barr body (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) 4 180803089 180930996 - 22301074;30032202 116899719 MODEL JAAIVD010000003;XM_032901759 XP_032757650 structural maintenance of chromosomes flexible hinge domain-containing protein 1 protein-coding 626058915 LOC116891623 transmembrane emp24 domain-containing protein 5-like 2 85233051 85233864 + 30032202 116891623 MODEL JAAIVD010000001;XM_032892830 XP_032748721 protein-coding 626058919 Cd40 CD40 molecule ENCODES a protein that exhibits antigen binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN B cell activation (ortholog); B cell mediated immunity (ortholog); CD40 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myocarditis (ortholog); allergic rhinitis (ortholog); FOUND IN CD40 receptor complex (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 5 152891252 152906394 - 22301074;30032202 116900765 MODEL JAAIVD010000023;XM_032902476 XP_032758367 tumor necrosis factor receptor superfamily member 5 protein-coding 626058932 LOC116905380 serine protease inhibitor A3B-like 7 115314348 115330576 - 30032202 116905380 MODEL JAAIVD010000026;XM_032908318 XP_032764209 protein-coding 626058938 LOC116893290 60S ribosomal protein L18a-like 2 148903617 148905719 + 116893290 MODEL JAAIVD010000001 pseudo 626058939 LOC116898459 60S ribosomal protein L17-like 4 100524810 100525399 + 116898459 MODEL JAAIVD010000003 pseudo 626058940 Dnah12 dynein axonemal heavy chain 12 INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); ASSOCIATED WITH megacolon (ortholog); Spermatogenic Failure 100 (ortholog); FOUND IN sperm flagellum (ortholog) 13 2485262 2637223 + 22301074;30032202 116914634 MODEL JAAIVD010000008;XM_032919024 XP_032774915 dynein heavy chain 12, axonemal protein-coding 626059019 LOC116914762 60S ribosomal protein L19-like 1 193889332 193896290 - 116914762 MODEL JAAIVD010000025 pseudo 626059020 LOC116884112 U6 spliceosomal RNA 14 46668488 46668595 + 116884112 MODEL JAAIVD010000009;XR_004385843 snrna 626059023 LOC116896820 vomeronasal type-2 receptor 1-like 3 91140604 91163700 + 22301074;30032202 116896820 MODEL JAAIVD010000012;XM_032898296;XM_032898297 XP_032754187;XP_032754188 protein-coding 626059035 Babam2 BRISC and BRCA1 A complex member 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage response (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) 7 22080897 22463300 - 22301074;30032202 116905960 MODEL JAAIVD010000026;XM_032908965;XM_032908966;XM_032908967 XP_032764856;XP_032764857;XP_032764858 BRISC and BRCA1-A complex member 2 protein-coding 626059056 Sgcg sarcoglycan gamma INVOLVED IN gene expression (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2C (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2D (ortholog); FOUND IN dystroglycan complex (ortholog); plasma membrane (ortholog); sarcoglycan complex (ortholog) 12 63163660 63193197 + 22301074;30032202 116913475 MODEL JAAIVD010000007;XM_032917677 XP_032773568 gamma-sarcoglycan protein-coding 626059067 LOC116906028 histone acetyltransferase type B catalytic subunit-like 7 32036558 32043959 - 116906028 MODEL JAAIVD010000026 pseudo 626059068 Rdh10 retinol dehydrogenase 10 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); bud elongation involved in lung branching (ortholog); ear development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Experimental Liver Cirrhosis (ortholog); Fetal Death (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleus (ortholog) 1 150452210 150479857 + 30032202 116904058 MODEL JAAIVD010000025;XM_032906923 XP_032762814 protein-coding 626059078 LOC116904454 glyceraldehyde-3-phosphate dehydrogenase-like 6 130455732 130456814 + 116904454 MODEL JAAIVD010000024 pseudo 626059079 Atf3 activating transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); cardiomyopathy (ortholog); Experimental Arthritis (ortholog); FOUND IN centrosome (ortholog); CHOP-ATF3 complex (ortholog); ciliary basal body (ortholog) 10 69249894 69264028 - 22301074;30032202 116911385 MODEL JAAIVD010000005;XM_032915338 XP_032771229 cyclic AMP-dependent transcription factor ATF-3 protein-coding 626059087 Tub TUB bipartite transcription factor ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); intraciliary transport particle A binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); phagocytosis, recognition (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); Retinal Dystrophy and Obesity (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 92452223 92530707 - 30032202 116891683 MODEL JAAIVD010000001;XM_032892945;XM_032892946;XM_032892947 XP_032748836;XP_032748837;XP_032748838 tubby protein homolog protein-coding 626059107 Ssb small RNA binding exonuclease protection factor La ENCODES a protein that exhibits poly(U) RNA binding (ortholog); RNA binding (ortholog); sequence-specific mRNA binding (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); nuclear histone mRNA catabolic process (ortholog); protein localization to cytoplasmic stress granule (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 5 47153336 47162803 + 22301074;30032202 116901490 MODEL JAAIVD010000023;XM_032903456;XM_032903457;XM_032903458;XM_032903459 XP_032759347;XP_032759348;XP_032759349;XP_032759350 lupus La protein protein-coding 626059131 LOC116912052 protein S100-A11-like 11 91096908 91105841 - 116912052 MODEL JAAIVD010000006 pseudo 626059132 Cabp5 calcium binding protein 5 FOUND IN cytosol (ortholog) 2 173619783 173632794 - 22301074 116894510 MODEL JAAIVD010000001;XM_032896212 XP_032752103 calcium-binding protein 5 protein-coding 626059142 Rpl27 ribosomal protein L27 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN response to aldosterone (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 16 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 9 60732610 60736303 + 22301074;30032202 116908582 MODEL JAAIVD010000002;XM_032911798 XP_032767689 60S ribosomal protein L27 protein-coding 626059150 LOC116894606 vomeronasal type-2 receptor 116-like 2 182285245 182318970 - 22301074;30032202 116894606 MODEL JAAIVD010000001;XM_032896323 XP_032752214 protein-coding 626059158 Tmem26 transmembrane protein 26 18 18066804 18110929 - 116887264 MODEL JAAIVD010000013;XM_032888831 XP_032744722 protein-coding 626059168 LOC116889014 cysteine-rich protein 2-like X 16389797 16390074 + 116889014 MODEL JAAIVD010000014 pseudo 626059169 Ddr1 discoidin domain receptor tyrosine kinase 1 ENCODES a protein that exhibits collagen binding (ortholog); protein tyrosine kinase collagen receptor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); axon development (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); alcoholic hepatitis (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border (ortholog); plasma membrane (ortholog) 18 8898377 8918475 - 22301074;30032202 116887464 MODEL JAAIVD010000013;XM_032889073 XP_032744964 epithelial discoidin domain-containing receptor 1 protein-coding 626059191 LOC116889316 medium-wave-sensitive opsin 1 X 128123408 128143472 + 22301074;30032202 116889316 MODEL JAAIVD010000014;XM_032890442 XP_032746333 protein-coding 626059199 Spata25 spermatogenesis associated 25 INVOLVED IN spermatogenesis (ortholog) 5 153130697 153132884 + 30032202 116902351 MODEL JAAIVD010000023;XM_032904835 XP_032760726 spermatogenesis-associated protein 25 protein-coding 626059205 Prdm15 PR/SET domain 15 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH pervasive developmental disorder (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 46687931 46744932 + 30032202 116898931 MODEL JAAIVD010000003;XM_032900348 XP_032756239 PR domain zinc finger protein 15 protein-coding 626059233 Cnst consortin, connexin sorting protein ENCODES a protein that exhibits connexin binding (ortholog); phosphatase binding (ortholog); INVOLVED IN positive regulation of Golgi to plasma membrane protein transport (ortholog); ASSOCIATED WITH thyroid gland disease (ortholog); FOUND IN plasma membrane (ortholog); protein-containing complex (ortholog); trans-Golgi network (ortholog) 10 57885954 57968042 + 22301074;30032202 116911796 MODEL JAAIVD010000005;XM_032915798 XP_032771689 consortin protein-coding 626059249 Kcnh5 potassium voltage-gated channel subfamily H member 5 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); Developmental and Epileptic Encephalopathy 112 (ortholog); developmental and epileptic encephalopathy 12 (ortholog); FOUND IN cell surface (ortholog); voltage-gated potassium channel complex (ortholog) 7 89078561 89364522 - 22301074;30032202 116905170 MODEL JAAIVD010000026;XM_032907944 XP_032763835 protein-coding 626059264 LOC116907018 olfactory receptor 7D4-like 8 15333008 15333949 - 22301074;30032202 116907018 MODEL JAAIVD010000027;XM_032909956 XP_032765847 protein-coding 626059267 LOC116886472 transcription factor BTF3-like 17 27487342 27487883 + 30032202 116886472 MODEL JAAIVD010000011;XM_032887976 XP_032743867 protein-coding 626059272 LOC116889590 endogenous retrovirus group K member 10 Pro protein-like Y 951498 952262 - 22301074 116889590 MODEL JAAIVD010000015;XM_032890526 XP_032746417 protein-coding 626059277 Asxl2 ASXL transcriptional regulator 2 ENCODES a protein that exhibits chromatin binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); INVOLVED IN adult heart development (ortholog); embryonic skeletal system morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); Developmental Disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 24116267 24198159 + 22301074;30032202 116906016 MODEL JAAIVD010000026;XM_032909057;XM_032909059;XM_032909060;XM_032909061;XM_032909062;XM_032909063;XM_032909064 XP_032764948;XP_032764950;XP_032764951;XP_032764952;XP_032764953;XP_032764954;XP_032764955 putative Polycomb group protein ASXL2 protein-coding 626059308 LOC116895995 peptidoglycan recognition protein 4-like 3 167000585 167005621 + 22301074 116895995 MODEL JAAIVD010000012;XM_032897022 XP_032752913 protein-coding 626059314 LOC116900541 olfactory receptor 4K3-like 5 89672096 89673013 + 22301074 116900541 MODEL JAAIVD010000023;XM_032902269 XP_032758160 protein-coding 626059317 Hrh4 histamine receptor H4 ENCODES a protein that exhibits histamine receptor activity (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); COVID-19 (ortholog); Pruritus (ortholog); FOUND IN membrane (ortholog) 15 30669527 30684988 - 22301074;30032202 116884973 MODEL JAAIVD010000010;XM_032886193;XM_032886194 XP_032742084;XP_032742085 histamine H4 receptor protein-coding 626059328 LOC116903085 non-histone chromosomal protein HMG-14-like 6 3970930 3971459 + 116903085 MODEL JAAIVD010000024 pseudo 626059329 LOC116895462 60S ribosomal protein L26-like 1 3 83395876 83396312 - 116895462 MODEL JAAIVD010000012 pseudo 626059330 LOC116888126 cardiolipin synthase (CMP-forming)-like X 103735236 103736251 - 116888126 MODEL JAAIVD010000014 pseudo 626059331 Rap1gds1 Rap1 GTPase-GDP dissociation stimulator 1 ENCODES a protein that exhibits GTPase regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiotensin-activated signaling pathway involved in heart process (ortholog); CAAX-box protein maturation (ortholog); cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH ALFADHEL SYNDROME (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 3 20061443 20210289 + 22301074;30032202 116896202 MODEL JAAIVD010000012;XM_032897252 XP_032753143 protein-coding 626059350 Ccdc124 coiled-coil domain containing 124 FOUND IN cytosol (ortholog); plasma membrane (ortholog) 13 13111562 13117189 - 30032202 116914702 MODEL JAAIVD010000008;XM_032919128;XM_032919129 XP_032775019;XP_032775020 coiled-coil domain-containing protein 124 protein-coding 626059363 LOC116901434 coiled-coil domain-containing protein 58-like 5 37344133 37344776 - 116901434 MODEL JAAIVD010000023 pseudo 626059364 LOC116889255 eukaryotic translation initiation factor 5-like 1 126878494 126879563 + 116889255 MODEL JAAIVD010000025 pseudo 626059365 Dkk1 dickkopf WNT signaling pathway inhibitor 1 ENCODES a protein that exhibits co-receptor binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH anodontia (ortholog); Bone Fractures (ortholog); Breast Neoplasms (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 2 30663645 30667426 - 22301074;30032202 116893775 MODEL JAAIVD010000001;XM_032895474 XP_032751365 dickkopf-related protein 1 protein-coding 626059373 LOC116904570 killer cell lectin-like receptor subfamily B member 1B 6 19014400 19028294 + 116904570 MODEL JAAIVD010000024;XM_032907369 XP_032763260 killer cell lectin-like receptor subfamily B member 1B allele A protein-coding 626059383 LOC116890153 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like 1 259307915 259321725 + 116890153 MODEL JAAIVD010000025;XM_032890890 XP_032746781 protein-coding 626059392 Dscaml1 DS cell adhesion molecule like 1 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN brain development (ortholog); dendrite self-avoidance (ortholog); embryonic skeletal system morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); prostate cancer (ortholog); FOUND IN cell surface (ortholog) 8 40162269 40282939 + 30032202 116908161 MODEL JAAIVD010000027;XM_032911461 XP_032767352 Down syndrome cell adhesion molecule-like protein 1 protein-coding 626059427 Dyrk1b dual specificity tyrosine phosphorylation regulated kinase 1B ENCODES a protein that exhibits protein kinase activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN adipose tissue development (ortholog); myoblast fusion (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome 3 (ortholog); Diamond-Blackfan anemia (ortholog); genetic disease (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) 2 167794302 167802202 - 22301074;30032202 116892402 MODEL JAAIVD010000001;XM_032894077;XM_032894078;XM_032894079;XM_032894080;XM_032894081 XP_032749968;XP_032749969;XP_032749970;XP_032749971;XP_032749972 dual specificity tyrosine-phosphorylation-regulated kinase 1B protein-coding 626059452 LOC116892837 acetyl-CoA acetyltransferase, cytosolic 2 191691818 191710301 - 30032202 116892837 MODEL JAAIVD010000001;XM_032894725 XP_032750616 protein-coding 626059465 Ap4e1 adaptor related protein complex 4 subunit epsilon 1 ASSOCIATED WITH congenital disorder of glycosylation Ig (ortholog); Developmental Disease (ortholog); Familial Persistent Stuttering 1 (ortholog); FOUND IN AP-4 adaptor complex (ortholog) 5 105842160 105905056 + 22301074;30032202 116901923 MODEL JAAIVD010000023;XM_032904146 XP_032760037 AP-4 complex subunit epsilon-1 protein-coding 626059490 LOC116899985 40S ribosomal protein S15-like 5 143329637 143330698 + 116899985 MODEL JAAIVD010000023 pseudo 626059491 Igf2bp1 insulin like growth factor 2 mRNA binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); dendrite arborization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); colon adenoma (ortholog); Experimental Neoplasms (ortholog); FOUND IN axon (ortholog); CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog) 9 58391875 58434157 + 30032202 116909135 MODEL JAAIVD010000002;XM_032912619;XM_032912620;XM_032912621 XP_032768510;XP_032768511;XP_032768512 insulin-like growth factor 2 mRNA-binding protein 1 protein-coding 626059516 LOC116904597 60S ribosomal protein L31-like 6 24234499 24234922 + 22301074;30032202 116904597 MODEL JAAIVD010000024;XM_032907392 XP_032763283 protein-coding 626059520 Akap5 A-kinase anchoring protein 5 ENCODES a protein that exhibits actin binding (ortholog); adenylate cyclase binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); amylase secretion (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); COVID-19 (ortholog); FOUND IN asymmetric synapse (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 7 90488694 90494556 + 22301074;30032202 116905177 MODEL JAAIVD010000026;XM_032907955;XM_032907956;XM_032907957;XM_032907958 XP_032763846;XP_032763847;XP_032763848;XP_032763849 A-kinase anchor protein 5 protein-coding 626059535 LOC116889508 small nucleolar RNA SNORA17 X 24870891 24871020 + 116889508 MODEL JAAIVD010000014;XR_004386454 snorna 626059538 Trnal-uag transfer RNA leucine (anticodon UAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48724138 48724219 + 116910805 MODEL JAAIVD010000002 trna 626059539 LOC116900220 60S ribosomal protein L31-like 5 60359733 60360132 + 116900220 MODEL JAAIVD010000023 pseudo 626059540 Ascl3 achaete-scute family bHLH transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelium development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 2 91742819 91743475 + 22301074;30032202 116891673 MODEL JAAIVD010000001;XM_032892928 XP_032748819 achaete-scute homolog 3 protein-coding 626059545 Sh3pxd2a SH3 and PX domains 2A ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); osteoclast fusion (ortholog); reactive oxygen species metabolic process (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Stroke (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); podosome (ortholog) 2 46799863 46998731 - 22301074;30032202 116891267 MODEL JAAIVD010000001;XM_032892158;XM_032892159;XM_032892160 XP_032748049;XP_032748050;XP_032748051 SH3 and PX domain-containing protein 2A protein-coding 626059566 LOC116893267 vomeronasal type-1 receptor 2-like 2 143689317 143691031 + 116893267 MODEL JAAIVD010000001 pseudo 626059567 LOC116912992 small nucleolar RNA SNORA17 11 89438513 89438645 - 116912992 MODEL JAAIVD010000006;XR_004389555 snorna 626059570 Cx3cl1 C-X3-C motif chemokine ligand 1 ENCODES a protein that exhibits chemoattractant activity (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN angiogenesis involved in wound healing (ortholog); autocrine signaling (ortholog); cell adhesion (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); allergic disease (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell body (ortholog); cell projection (ortholog); cell surface (ortholog) 17 1660099 1671117 + 22301074;30032202 116886202 MODEL JAAIVD010000011;XM_032887588;XM_032887589 XP_032743479;XP_032743480 fractalkine protein-coding 626059580 Gnal G protein subunit alpha L ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to dopamine (ortholog); PARTICIPATES IN dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; ASSOCIATED WITH Dysarthria (ortholog); dystonia (ortholog); dystonia 25 (ortholog); FOUND IN acrosomal vesicle (ortholog); apical cytoplasm (ortholog); ciliary necklace (ortholog) 15 64072488 64216425 - 22301074;30032202 116884323 MODEL JAAIVD010000010;XM_032885456;XM_032885457 XP_032741347;XP_032741348 guanine nucleotide-binding protein G(olf) subunit alpha protein-coding 626059599 Slc25a51 solute carrier family 25 member 51 ENCODES a protein that exhibits NAD transmembrane transporter activity (ortholog); INVOLVED IN aerobic electron transport chain (ortholog); mitochondrial NAD transmembrane transport (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 1111327 1119019 + 116890762 MODEL JAAIVD010000025;XM_032891228;XM_032891236 XP_032747119;XP_032747127 protein-coding 626059607 LOC116905695 60S ribosomal protein L27-like 7 34469848 34470254 + 116905695 MODEL JAAIVD010000026 pseudo 626059608 Chordc1 cysteine and histidine rich domain containing 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN negative regulation of Rho-dependent protein serine/threonine kinase activity (ortholog); protein folding (ortholog); regulation of cellular response to heat (ortholog); ASSOCIATED WITH chronic myeloid leukemia (ortholog) 8 14049057 14070160 + 30032202 116906653 MODEL JAAIVD010000027;XM_032909438 XP_032765329 cysteine and histidine-rich domain-containing protein 1 protein-coding 626059623 C15H5orf46 chromosome 15 C5orf46 homolog ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 15 23945648 23966800 + 116884987 MODEL JAAIVD010000010;XM_032886207;XM_032886208 XP_032742098;XP_032742099 uncharacterized protein C5orf46 homolog protein-coding 626059634 LOC116900550 olfactory receptor 4K3-like 5 89815916 89816854 - 22301074 116900550 MODEL JAAIVD010000023;XM_032902275 XP_032758166 protein-coding 626059637 LOC116889390 protein FAM47A-like X 41475029 41476323 + 116889390 MODEL JAAIVD010000014;XM_032890491 XP_032746382 protein-coding 626059640 Best1 bestrophin 1 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN chloride transport (ortholog); detection of light stimulus involved in visual perception (ortholog); gamma-aminobutyric acid secretion, neurotransmission (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH autosomal dominant vitreoretinochoroidopathy (ortholog); bestrophinopathy (ortholog); cone-rod dystrophy (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); chloride channel complex (ortholog) 2 151209215 151225836 + 22301074 116892076 MODEL JAAIVD010000001;XM_032893550 XP_032749441 bestrophin-1 protein-coding 626059656 Ttll10 tubulin tyrosine ligase like 10 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, elongating (ortholog); INVOLVED IN protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) 1 4595391 4619303 + 22301074 116891610 MODEL JAAIVD010000025;XM_032892813 XP_032748704 inactive polyglycylase TTLL10 protein-coding 626059674 LOC116896116 small proline-rich protein 2I-like 3 829067 829297 - 116896116 MODEL JAAIVD010000012 pseudo 626059675 LOC116912581 SUMO-conjugating enzyme UBC9-like 11 46095863 46096383 - 116912581 MODEL JAAIVD010000006 pseudo 626059676 LOC116905072 40S ribosomal protein S6-like 7 71068590 71069330 - 22301074;30032202 116905072 MODEL JAAIVD010000026;XM_032907780 XP_032763671 protein-coding 626059679 LOC116893646 membrane-spanning 4-domains subfamily A member 4A-like 2 10857223 10876686 + 22301074;30032202 116893646 MODEL JAAIVD010000001;XM_032895364 XP_032751255 protein-coding 626059690 Abra actin binding Rho activating protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog); plasma membrane (ortholog) 1 216581489 216585341 - 30032202 116890081 MODEL JAAIVD010000025;XM_032890841 XP_032746732 actin-binding Rho-activating protein protein-coding 626059696 Il1rn interleukin 1 receptor antagonist ENCODES a protein that exhibits interleukin-1 receptor antagonist activity (ortholog); interleukin-1 receptor binding (ortholog); interleukin-1 type I receptor antagonist activity (ortholog); INVOLVED IN acute-phase response (ortholog); carboxylic acid metabolic process (ortholog); cellular response to norepinephrine stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH Abscess (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); extracellular region (ortholog) 5 12857104 12861509 - 22301074;30032202 116900106 MODEL JAAIVD010000023;XM_032901882 XP_032757773 interleukin-1 receptor antagonist protein protein-coding 626059704 LOC116890520 small nucleolar RNA SNORA17 1 135314619 135314750 - 116890520 MODEL JAAIVD010000025;XR_004386702 snorna 626059707 LOC116892734 olfactory receptor 5V1-like 2 179518728 179519755 - 22301074 116892734 MODEL JAAIVD010000001;XM_032894607 XP_032750498 protein-coding 626059711 Calhm1 calcium homeostasis modulator 1 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); identical protein binding (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN ATP export (ortholog); ATP transport (ortholog); monoatomic cation transport (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); plasma membrane raft (ortholog) 2 46671878 46674624 - 30032202 116893816 MODEL JAAIVD010000001;XM_032895530 XP_032751421 calcium homeostasis modulator protein 1 protein-coding 626059715 LOC116888419 uncharacterized LOC116888419 X 66534000 66537833 - 116888419 MODEL JAAIVD010000014;XR_004386310 pseudo 626059718 Pla2g5 phospholipase A2 group V ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); calcium-independent phospholipase A2 activity (ortholog); heparin binding (ortholog); INVOLVED IN arachidonate secretion (ortholog); leukotriene biosynthetic process (ortholog); low-density lipoprotein particle remodeling (ortholog); ASSOCIATED WITH familial benign fleck retina (ortholog); late-onset retinal degeneration (ortholog); FOUND IN cell surface (ortholog); early phagosome (ortholog); perinuclear region of cytoplasm (ortholog) 1 19394663 19401348 + 22301074;30032202 116886552 MODEL JAAIVD010000025;XM_032888072 XP_032743963 calcium-dependent phospholipase A2 protein-coding 626059726 LOC116887791 small nucleolar RNA SNORA51 18 9811519 9811652 - 116887791 MODEL JAAIVD010000013;XR_004386286 snorna 626059729 LOC116892543 optic atrophy 3 protein homolog 2 171371051 171390106 - 30032202 116892543 MODEL JAAIVD010000001;XM_032894308 XP_032750199 protein-coding 626059735 LOC116902601 small nucleolar RNA SNORA17 5 43290687 43290817 - 116902601 MODEL JAAIVD010000023;XR_004388190 snorna 626059738 LOC116886770 5S ribosomal RNA 17 43133136 43133253 - 116886770 MODEL JAAIVD010000011 pseudo 626059739 LOC116898439 60S ribosomal protein L21-like 4 94493060 94493550 + 116898439 MODEL JAAIVD010000003 pseudo 626059740 LOC116897531 small nucleolar RNA SNORA48 3 128012080 128012223 - 116897531 MODEL JAAIVD010000012;XR_004387546 snorna 626059743 Ankh ANKH inorganic pyrophosphate transport regulator ENCODES a protein that exhibits ATP transmembrane transporter activity (ortholog); inorganic diphosphate transmembrane transporter activity (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN ATP export (ortholog); bone mineralization (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH ankylosis (ortholog); arthritis (ortholog); autosomal dominant craniometaphyseal dysplasia (ortholog); FOUND IN extracellular region (ortholog); membrane (ortholog); plasma membrane (ortholog) 3 153251570 153380596 - 22301074;30032202 116897061 MODEL JAAIVD010000012;XM_032898686 XP_032754577 progressive ankylosis protein homolog protein-coding 626059759 LOC116892078 uncharacterized LOC116892078 1 5797186 5797841 + 116892078 MODEL JAAIVD010000025;XR_004386911 ncrna 626059763 Htr1f 5-hydroxytryptamine receptor 1F ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH migraine (ortholog); FOUND IN plasma membrane (ortholog) 7 109522186 109523585 + 22301074;30032202 116905841 MODEL JAAIVD010000026;XM_032908814 XP_032764705 protein-coding 626059768 LOC116894736 pyruvate kinase PKM-like 2 96268214 96269717 + 116894736 MODEL JAAIVD010000001 pseudo 626059769 LOC116890469 small nucleolar RNA SNORA24 1 170632698 170632819 - 116890469 MODEL JAAIVD010000025 pseudo 626059770 Tm7sf2 transmembrane 7 superfamily member 2 ENCODES a protein that exhibits Delta14-sterol reductase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); organelle membrane (ortholog) 2 1623646 1628096 + 22301074;30032202 116890678 MODEL JAAIVD010000001;XM_032891086 XP_032746977 delta(14)-sterol reductase TM7SF2 protein-coding 626059784 Ndufa2 NADH:ubiquinone oxidoreductase subunit A2 INVOLVED IN blastocyst hatching (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Disease Progression (ortholog); nuclear type mitochondrial complex I deficiency 13 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 15 7637995 7639978 + 116884452 MODEL JAAIVD010000010;XM_032885551 XP_032741442 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2 protein-coding 626059791 LOC116911647 uncharacterized LOC116911647 1 232161630 232162810 - 116911647 MODEL JAAIVD010000025;XR_004389332 ncrna 626059795 Trappc13 trafficking protein particle complex subunit 13 3 193190012 193221549 + 30032202 116897230 MODEL JAAIVD010000012;XM_032898951;XM_032898952;XM_032898953;XM_032898954 XP_032754842;XP_032754843;XP_032754844;XP_032754845 trafficking protein particle complex 13 protein-coding 626059822 LOC116903763 taste receptor type 2 member 140-like 6 15726754 15727689 + 22301074;30032202 116903763 MODEL JAAIVD010000024;XM_032906454 XP_032762345 protein-coding 626059825 LOC116905663 neurexin-3 7 101984776 102778212 + 116905663 MODEL JAAIVD010000026;XM_032908632;XM_032908633;XM_032908635;XM_032908636;XM_032908637;XM_032908638;XM_032908639 XP_032764523;XP_032764524;XP_032764526;XP_032764527;XP_032764528;XP_032764529;XP_032764530 protein-coding 626059858 Ccl26 C-C motif chemokine ligand 26 ENCODES a protein that exhibits CCR3 chemokine receptor binding (ortholog); chemokine activity (ortholog); CX3C chemokine receptor binding (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); monocyte chemotaxis (ortholog); positive regulation of actin filament polymerization (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH allergic asthma (ortholog); allergic rhinitis (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog) 16 18455804 18458870 + 22301074;30032202 116885136 MODEL JAAIVD010000004;XM_032886319 XP_032742210 C-C motif chemokine 26 protein-coding 626059865 LOC116900858 metallothionein-2-like 5 63915304 63915788 + 116900858 MODEL JAAIVD010000023 pseudo 626059866 LOC116914335 mothers against decapentaplegic homolog 2-like 13 48149062 48149943 - 116914335 MODEL JAAIVD010000008 pseudo 626059867 LOC116910750 U2 spliceosomal RNA 9 60940025 60940214 - 116910750 MODEL JAAIVD010000002;XR_004389263 snrna 626059870 Smlr1 small leucine rich protein 1 2 211581677 211595908 - 116894684 MODEL JAAIVD010000001;XM_032896386 XP_032752277 small leucine-rich protein 1 protein-coding 626059876 Prnd prion like protein doppel ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN acrosome reaction (ortholog); intracellular copper ion homeostasis (ortholog); single fertilization (ortholog); FOUND IN external side of plasma membrane (ortholog) 5 111678252 111681420 + 22301074;30032202 116900646 MODEL JAAIVD010000023;XM_032902356 XP_032758247 prion-like protein doppel protein-coding 626059882 Ell elongation factor for RNA polymerase II ENCODES a protein that exhibits phosphatase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of transcription by RNA polymerase III (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN aldosterone signaling pathway; RNA polymerase II transcription elongation pathway; FOUND IN Cajal body (ortholog); cytosol (ortholog); euchromatin (ortholog) 13 12792008 12839334 + 22301074;30032202 116914475 MODEL JAAIVD010000008;XM_032918775 XP_032774666 RNA polymerase II elongation factor ELL protein-coding 626059898 LOC116910631 U6 spliceosomal RNA 9 93468088 93468191 + 116910631 MODEL JAAIVD010000002;XR_004389170 snrna 626059901 Zgrf1 zinc finger GRF-type containing 1 ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); INVOLVED IN recombinational repair (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); speech-language disorder-1 (ortholog); FOUND IN nucleus (ortholog) 3 31731767 31793791 - 22301074;30032202 116896275 MODEL JAAIVD010000012;XM_032897356 XP_032753247 protein ZGRF1 protein-coding 626059930 Lgals3 galectin 3 ENCODES a protein that exhibits advanced glycation end-product receptor activity (ortholog); carbohydrate binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); eosinophil chemotaxis (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); aortic valve stenosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) 12 75660981 75673725 - 22301074;30032202 116913473 MODEL JAAIVD010000007;XM_032917675 XP_032773566 galectin-3 protein-coding 626059940 LOC116895838 nucleolar GTP-binding protein 1-like 3 80880305 80882175 + 116895838 MODEL JAAIVD010000012 pseudo 626059941 LOC116886706 peptidyl-prolyl cis-trans isomerase A-like 1 23478332 23479038 + 116886706 MODEL JAAIVD010000025;XR_004386128 pseudo 626059944 Pax8 paired box 8 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cellular response to gonadotropin stimulus (ortholog); central nervous system development (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital hypothyroidism (ortholog); congenital nongoitrous hypothyroidism 2 (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 12736977 12792710 + 30032202 116901336 MODEL JAAIVD010000023;XM_032903166 XP_032759057 paired box protein Pax-8 protein-coding 626059960 Ptgds prostaglandin D2 synthase ENCODES a protein that exhibits fatty acid binding (ortholog); prostaglandin-D synthase activity (ortholog); retinoid binding (ortholog); INVOLVED IN cyclooxygenase pathway (ortholog); gene expression (ortholog); negative regulation of male germ cell proliferation (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH arteriosclerosis (ortholog); carotid artery disease (ortholog); Diabetic Nephropathies (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 5 11713729 11716149 + 30032202 116901297 MODEL JAAIVD010000023;XM_032903095 XP_032758986 prostaglandin-H2 D-isomerase protein-coding 626059970 Ppp1r3f protein phosphatase 1 regulatory subunit 3F ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN regulation of glycogen (starch) synthase activity (ortholog); regulation of glycogen biosynthetic process (ortholog); FOUND IN membrane (ortholog) X 14562267 14579193 + 30032202 116888739 MODEL JAAIVD010000014;XM_032890031 XP_032745922 protein-coding 626059978 Vdac1 voltage dependent anion channel 1 ENCODES a protein that exhibits ceramide binding (ortholog); cholesterol binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); behavioral fear response (ortholog); calcium import into the mitochondrion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Diabetic Nephropathies (ortholog); epilepsy (ortholog); FOUND IN membrane (ortholog); mitochondrial membrane (ortholog); mitochondrial nucleoid (ortholog) 9 34860037 34886634 + 22301074;30032202 116908838 MODEL JAAIVD010000002;XM_032912260 XP_032768151 voltage-dependent anion-selective channel protein 1 protein-coding 626059991 Maml1 mastermind like transcriptional coactivator 1 ENCODES a protein that exhibits peptide antigen binding (ortholog); protein kinase binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN atrioventricular node cell development (ortholog); myoblast differentiation (ortholog); Notch signaling pathway (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); prostate cancer (ortholog); FOUND IN MAML1-RBP-Jkappa- ICN1 complex (ortholog); nucleus (ortholog) 9 32923798 32958931 - 22301074;30032202 116910089 MODEL JAAIVD010000002;XM_032913911 XP_032769802 mastermind-like protein 1 protein-coding 626060000 LOC116885178 uncharacterized LOC116885178 16 21881007 21881966 - 116885178 MODEL JAAIVD010000004;XR_004385991 ncrna 626060004 Tbl2 transducin beta like 2 ENCODES a protein that exhibits phosphoprotein binding (ortholog); protein kinase binding (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); microcephaly (ortholog); FOUND IN endoplasmic reticulum (ortholog) 16 18860956 18874931 - 22301074;30032202 116885458 MODEL JAAIVD010000004;XM_032886740 XP_032742631 transducin beta-like protein 2 protein-coding 626060015 LOC116915159 U6 spliceosomal RNA 13 11559951 11560057 - 116915159 MODEL JAAIVD010000008;XR_004389823 snrna 626060018 LOC116890793 glutathione S-transferase P 2 3594748 3597241 + 22301074;30032202 116890793 MODEL JAAIVD010000001;XM_032891268 XP_032747159 protein-coding 626060029 Per2 period circadian regulator 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); advanced sleep phase syndrome 1 (ortholog); alcohol dependence (ortholog); FOUND IN Cry-Per complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 163414226 163446131 - 30032202 116899640 MODEL JAAIVD010000003;XM_032901637 XP_032757528 period circadian protein homolog 2 protein-coding 626060055 LOC116902942 uncharacterized LOC116902942 6 121341130 121344452 + 116902942 MODEL JAAIVD010000024;XR_004388244;XR_004388245 ncrna 626060062 LOC116903138 receptor-interacting serine/threonine-protein kinase 2-like 1 127655125 127668088 + 22301074 116903138 MODEL JAAIVD010000025;XM_032905497 XP_032761388 protein-coding 626060073 Apip APAF1 interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); methylthioribulose 1-phosphate dehydratase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); negative regulation of apoptotic process (ortholog); protein homotetramerization (ortholog); FOUND IN cytoplasm (ortholog) 5 80910394 80936574 + 22301074;30032202 116901683 MODEL JAAIVD010000023;XM_032903805;XM_032903806 XP_032759696;XP_032759697 methylthioribulose-1-phosphate dehydratase protein-coding 626060087 Bbln bublin coiled coil protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); bone development (ortholog); FOUND IN cell junction (ortholog); intermediate filament (ortholog); kinetochore microtubule (ortholog) 5 3249514 3252356 + 116901152 MODEL JAAIVD010000023;XM_032902793 XP_032758684 C5H9orf16 UPF0184 protein C9orf16 homolog;chromosome 5 C9orf16 homolog protein-coding 626060093 LOC116893093 ankyrin repeat domain-containing protein 7-like 2 61102404 61120611 - 22301074 116893093 MODEL JAAIVD010000001;XM_032895037 XP_032750928 protein-coding 626060100 LOC116883252 ATP synthase F(0) complex subunit C2, mitochondrial-like 14 69354967 69355559 + 116883252 MODEL JAAIVD010000009 pseudo 626060101 LOC116911304 complement factor H-like 10 20108708 20178259 - 116911304 MODEL JAAIVD010000005;XM_032915218 XP_032771109 protein-coding 626060117 Pard6a par-6 family cell polarity regulator alpha ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); centrosome cycle (ortholog); establishment or maintenance of epithelial cell apical/basal polarity (ortholog); PARTICIPATES IN adenosine signaling pathway; insulin signaling pathway; protein kinase C (PKC) signaling pathway; FOUND IN axonal growth cone (ortholog); bicellular tight junction (ortholog); cell cortex (ortholog) 17 25436052 25437892 + 30032202 116886059 MODEL JAAIVD010000011;XM_032887364;XM_032887365;XM_032887366 XP_032743255;XP_032743256;XP_032743257 partitioning defective 6 homolog alpha protein-coding 626060130 Tirap TIR domain containing adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to bacterial lipopeptide (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Bacteremia (ortholog); Immunodeficiency 67 (ortholog); malaria (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) 8 30737901 30751077 - 22301074 116907519 MODEL JAAIVD010000027;XM_032910521;XM_032910522;XM_032910524 XP_032766412;XP_032766413;XP_032766415 toll/interleukin-1 receptor domain-containing adapter protein protein-coding 626060144 Gtpbp2 GTP binding protein 2 ENCODES a protein that exhibits alpha-aminoacyl-tRNA binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); rescue of stalled ribosome (ortholog); ASSOCIATED WITH cholestasis (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 4 83700132 83710171 - 22301074;30032202 116899121 MODEL JAAIVD010000003;XM_032900643;XM_032900644;XM_032900646 XP_032756534;XP_032756535;XP_032756537 GTP-binding protein 2 protein-coding 626060167 LOC116895868 UPF0235 protein C15orf40 homolog 3 100756548 100757018 - 116895868 MODEL JAAIVD010000012 pseudo 626060168 LOC116901019 UPF0472 protein C16orf72 homolog 5 128525804 128526363 + 116901019 MODEL JAAIVD010000023 pseudo 626060169 LOC116895265 cornifin-A 3 1587356 1589332 + 116895265 MODEL JAAIVD010000012;XM_032896582 XP_032752473 protein-coding 626060175 Med13l mediator complex subunit 13L ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Au-Kline Syndrome (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN mediator complex (ortholog) 16 35060825 35265250 - 22301074;30032202 116885418 MODEL JAAIVD010000004;XM_032886705 XP_032742596 mediator of RNA polymerase II transcription subunit 13-like protein-coding 626060210 LOC116912959 small nucleolar RNA SNORA9 11 75468222 75468354 - 116912959 MODEL JAAIVD010000006;XR_004389526 snorna 626060213 Hapstr1 HUWE1 associated protein modifying stress responses ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of signal transduction by p53 class mediator (ortholog); regulation of cellular response to stress (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 13168144 13197269 - 116910157 MODEL JAAIVD010000002;XM_032914016 XP_032769907 C9H16orf72 UPF0472 protein C16orf72 homolog;chromosome 9 C16orf72 homolog protein-coding 626060221 LOC116890052 pre-mRNA-splicing factor CWC22 homolog 1 209521487 209522950 - 116890052 MODEL JAAIVD010000025 pseudo 626060222 Emilin2 elastin microfibril interfacer 2 INVOLVED IN negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); positive regulation of apoptotic process (ortholog); FOUND IN extracellular region (ortholog) 4 180721646 180780184 - 22301074 116898598 MODEL JAAIVD010000003;XM_032899792 XP_032755683 EMILIN-2 protein-coding 626060233 Oxa1l OXA1L mitochondrial inner membrane insertase ENCODES a protein that exhibits membrane insertase activity (ortholog); mitochondrial ribosome binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN aerobic respiration (ortholog); mitochondrial protein quality control (ortholog); mitochondrial proton-transporting ATP synthase complex assembly (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH mitochondrial metabolism disease (ortholog); myoepithelioma (ortholog); prostate cancer (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 12 70632600 70639754 - 30032202 116913222 MODEL JAAIVD010000007;XM_032917397 XP_032773288 OXA1L mitochondrial inner membrane protein;mitochondrial inner membrane protein OXA1L protein-coding 626060245 LOC116903643 lamin-B2-like 6 148827891 148829688 - 116903643 MODEL JAAIVD010000024 pseudo 626060246 LOC116900080 uncharacterized LOC116900080 5 10429970 10431919 - 116900080 MODEL JAAIVD010000023;XR_004387917 ncrna 626060252 P2ry10 P2Y receptor family member 10 X 64748494 64762571 - 22301074;30032202 116888799 MODEL JAAIVD010000014;XM_032890080;XM_032890081 XP_032745971;XP_032745972 putative P2Y purinoceptor 10 protein-coding 626060263 LOC116889799 NADH-ubiquinone oxidoreductase chain 5-like 30032202 116889799 MODEL JAAIVD010000605;XM_032890648 XP_032746539 protein-coding 626060264 Wfikkn1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); FOUND IN extracellular region (ortholog) 9 3141213 3144596 - 22301074;30032202 116908476 MODEL JAAIVD010000002;XM_032911625 XP_032767516 WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 1 protein-coding 626060270 LOC116894835 U6 spliceosomal RNA 2 192285699 192285805 + 116894835 MODEL JAAIVD010000001;XR_004387050 snrna 626060273 LOC116899973 40S ribosomal protein S19-like 5 130358823 130359259 + 116899973 MODEL JAAIVD010000023 pseudo 626060274 LOC116895012 small nucleolar RNA SNORA48 2 23644424 23644566 + 116895012 MODEL JAAIVD010000001;XR_004387199 snorna 626060277 LOC116902509 small nucleolar RNA SNORA71 5 137709759 137709890 - 116902509 MODEL JAAIVD010000023;XR_004388119 snorna 626060280 LOC116895269 small proline-rich protein 2I-like 3 1654608 1654838 - 116895269 MODEL JAAIVD010000012 pseudo 626060281 LOC116907639 uncharacterized LOC116907639 8 100350168 100350482 - 116907639 MODEL JAAIVD010000027;XR_004388835 ncrna 626060285 LOC116888955 PRAME family member 20-like X 4681745 4683187 + 22301074;30032202 116888955 MODEL JAAIVD010000014;XM_032890183 XP_032746074 protein-coding 626060288 LOC116910331 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial-like 9 61096767 61097105 - 30032202 116910331 MODEL JAAIVD010000002;XM_032914190 XP_032770081 protein-coding 626060291 LOC116884305 40S ribosomal protein S24-like 1 209531428 209536436 + 116884305 MODEL JAAIVD010000025 pseudo 626060292 LOC116900946 olfactory receptor 4F4-like 5 89802079 89805116 + 22301074 116900946 MODEL JAAIVD010000023;XM_032902587 XP_032758478 protein-coding 626060296 Aars1 alanyl-tRNA synthetase 1 ENCODES a protein that exhibits alanine-tRNA ligase activity (ortholog); amino acid binding (ortholog); aminoacyl-tRNA deacylase activity (ortholog); INVOLVED IN alanyl-tRNA aminoacylation (ortholog); cerebellar Purkinje cell layer development (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); PARTICIPATES IN alanine metabolic pathway; lactic acidosis pathway; primary hyperoxaluria type 1 pathway; ASSOCIATED WITH adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2N (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 17 30728728 30750176 + 22301074;30032202 116886112 MODEL JAAIVD010000011;XM_032887444 XP_032743335 alanine--tRNA ligase, cytoplasmic protein-coding 626060321 LOC116885251 serine/threonine-protein kinase Chk2 16 43478457 43504619 - 22301074;30032202 116885251 MODEL JAAIVD010000004;XM_032886491 XP_032742382 protein-coding 626060338 LOC116895277 protein SET-like 3 3799717 3800583 + 116895277 MODEL JAAIVD010000012 pseudo 626060339 Avl9 AVL9 cell migration associated INVOLVED IN cell migration (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN recycling endosome (ortholog) 6 84327465 84374697 - 30032202 116903745 MODEL JAAIVD010000024;XM_032906435 XP_032762326 late secretory pathway protein AVL9 homolog protein-coding 626060359 Bcl6b BCL6B transcription repressor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 9 49826582 49832242 - 22301074;30032202 116909004 MODEL JAAIVD010000002;XM_032912475 XP_032768366 B-cell CLL/lymphoma 6 member B protein protein-coding 626060372 LOC116900853 negative elongation factor A-like 5 62801789 62804975 + 116900853 MODEL JAAIVD010000023 pseudo 626060373 Tmpo thymopoietin ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH amyloidosis (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); FOUND IN chromatin (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 1 170222859 170247677 - 22301074 116908127 MODEL JAAIVD010000025;XM_032911416;XM_032911425;XM_032911431;XM_032911439;XM_032911448 XP_032767307;XP_032767316;XP_032767322;XP_032767330;XP_032767339 protein-coding 626060392 Gpr52 G protein-coupled receptor 52 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN locomotory behavior (ortholog); response to xenobiotic stimulus (ortholog) 10 39853404 39857030 - 22301074 116911727 MODEL JAAIVD010000005;XM_032915706 XP_032771597 G-protein coupled receptor 52 protein-coding 626060397 LOC116894733 60S ribosomal protein L32-like 2 77499119 77505605 + 116894733 MODEL JAAIVD010000001 pseudo 626060398 Ndufb1 NADH:ubiquinone oxidoreductase subunit B1 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 15 64284480 64284724 - 22301074;30032202 116884612 MODEL JAAIVD010000010;XM_032885753 XP_032741644 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 1 protein-coding 626060402 Olfml1 olfactomedin like 1 2 105676146 105701387 + 30032202 116891834 MODEL JAAIVD010000001;XM_032893202 XP_032749093 olfactomedin-like protein 1 protein-coding 626060409 LOC116909254 olfactory receptor 10A7-like 1 159944949 159945877 + 116909254 MODEL JAAIVD010000025 pseudo 626060410 Prpf40b pre-mRNA processing factor 40B 1 272057662 272121030 + 22301074;30032202 116885019 MODEL JAAIVD010000025;XM_032886265;XM_032886266;XM_032886267;XM_032886268;XM_032886269;XM_032886270;XM_032886271;XM_032886272;XM_032886273;XM_032886274;XM_032886276;XM_032886285 XP_032742156;XP_032742157;XP_032742158;XP_032742159;XP_032742160;XP_032742161;XP_032742162;XP_032742163;XP_032742164;XP_032742165;XP_032742167;XP_032742176 pre-mRNA processing factor 40 homolog B;pre-mRNA-processing factor 40 homolog B protein-coding 626060476 LOC116887235 sodium-dependent glucose transporter 1 18 39787880 39800846 - 22301074 116887235 MODEL JAAIVD010000013;XM_032888795;XM_032888796 XP_032744686;XP_032744687 protein-coding 626060487 Ninj2 ninjurin 2 ENCODES a protein that exhibits cholesterol binding (ortholog); membrane destabilizing activity (ortholog); INVOLVED IN cytolysis (ortholog); FOUND IN plasma membrane (ortholog) 6 26545832 26548335 - 22301074;30032202 116903335 MODEL JAAIVD010000024;XM_032905779 XP_032761670 ninjurin-2 protein-coding 626060494 LOC116902692 putative olfactory receptor 9A1 6 41372400 41373341 - 22301074 116902692 MODEL JAAIVD010000024;XM_032905047 XP_032760938 protein-coding 626060497 Kiaa1549 KIAA1549 ortholog ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); malignant astrocytoma (ortholog); FOUND IN photoreceptor connecting cilium (ortholog) 6 101562231 101683774 + 116903953 MODEL JAAIVD010000024;XM_032906739;XM_032906740 XP_032762630;XP_032762631 UPF0606 protein KIAA1549 homolog protein-coding 626060523 Dtx1 deltex E3 ubiquitin ligase 1 ENCODES a protein that exhibits Notch binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); glial cell differentiation (ortholog); negative regulation of neuron differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH oligodendroglioma (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 16 33115204 33145153 + 22301074;30032202 116885289 MODEL JAAIVD010000004;XM_032886538 XP_032742429 E3 ubiquitin-protein ligase DTX1 protein-coding 626060536 Ddx46 DEAD-box helicase 46 INVOLVED IN mRNA splicing, via spliceosome (ortholog); U2-type prespliceosome assembly (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN fibrillar center (ortholog); nuclear speck (ortholog); U2-type spliceosomal complex (ortholog) 14 73956272 73998809 + 22301074;30032202 116883166 MODEL JAAIVD010000009;XM_032884204 XP_032740095 probable ATP-dependent RNA helicase DDX46 protein-coding 626060563 LOC116900404 olfactory receptor 4P4-like 5 70089725 70090666 + 22301074 116900404 MODEL JAAIVD010000023;XM_032902149 XP_032758040 protein-coding 626060566 LOC116899784 U6 spliceosomal RNA 4 62063248 62063345 + 116899784 MODEL JAAIVD010000003 pseudo 626060567 LOC116900216 cytochrome P450 2J3-like 1 58931720 58969751 - 22301074;30032202 116900216 MODEL JAAIVD010000025;XM_032901972 XP_032757863 protein-coding 626060580 LOC116885023 5S ribosomal RNA 15 67093720 67093841 + 116885023 MODEL JAAIVD010000010 pseudo 626060581 LOC116905584 ubiquitin-conjugating enzyme E2 E1-like 7 1193793 1194530 + 116905584 MODEL JAAIVD010000026 pseudo 626060582 LOC116900700 beta-defensin 36-like 5 131917120 131920645 - 22301074 116900700 MODEL JAAIVD010000023;XM_032902403 XP_032758294 protein-coding 626060588 LOC116892733 olfactory receptor 5 2 179615128 179616066 + 22301074 116892733 MODEL JAAIVD010000001;XM_032894606 XP_032750497 protein-coding 626060591 Dixdc1 DIX domain containing 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell proliferation in forebrain (ortholog); cerebellar cortex development (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); autistic disorder (ortholog); bipolar disorder (ortholog); FOUND IN axon terminus (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 8 45133749 45203267 - 22301074;30032202 116906539 MODEL JAAIVD010000027;XM_032909233;XM_032909234;XM_032909235;XM_032909237 XP_032765124;XP_032765125;XP_032765126;XP_032765128 dixin protein-coding 626060625 LOC116888140 high mobility group protein B4-like X 108226428 108226790 + 30032202 116888140 MODEL JAAIVD010000014;XM_032889475 XP_032745366 protein-coding 626060628 LOC116908967 keratin-associated protein 9-1-like 9 54626895 54627452 + 22301074 116908967 MODEL JAAIVD010000002;XM_032912429 XP_032768320 protein-coding 626060631 Marveld3 MARVEL domain containing 3 ENCODES a protein that exhibits mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cell-cell junction organization (ortholog); negative regulation of epithelial cell migration (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasmic vesicle (ortholog) 17 29652519 29667038 - 22301074 116886402 MODEL JAAIVD010000011;XM_032887872;XM_032887873 XP_032743763;XP_032743764 MARVEL domain-containing protein 3 protein-coding 626060641 LOC116914843 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like 13 22955014 22955664 + 116914843 MODEL JAAIVD010000008 pseudo 626060642 Tmem52 transmembrane protein 52 1 5232440 5234274 - 116886036 MODEL JAAIVD010000025;XM_032887335;XM_032887345 XP_032743226;XP_032743236 protein-coding 626060654 Atxn7 ataxin 7 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); negative regulation of insulin-like growth factor receptor signaling pathway (ortholog); negative regulation of microtubule depolymerization (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 12 83897713 83987818 + 116913119 MODEL JAAIVD010000007;XM_032917276 XP_032773167 ataxin-7 protein-coding 626060670 LOC116907286 phospholipid scramblase 1-like 8 84034858 84047676 + 22301074;30032202 116907286 MODEL JAAIVD010000027;XM_032910236 XP_032766127 protein-coding 626060678 LOC116897729 Golgi SNAP receptor complex member 1-like 4 89962870 89963391 - 116897729 MODEL JAAIVD010000003 pseudo 626060679 LOC116897080 uncharacterized LOC116897080 3 157427492 157465848 - 116897080 MODEL JAAIVD010000012;XR_004387395 ncrna 626060685 LOC116913484 tubulin alpha chain-like 1 178465620 178466108 - 22301074;30032202 116913484 MODEL JAAIVD010000025;XM_032917720 XP_032773611 protein-coding 626060688 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60947709 60947781 - 116897693 MODEL JAAIVD010000012 trna 626060689 Foxr1 forkhead box R1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 38978686 38991098 - 22301074;30032202 116908157 MODEL JAAIVD010000027;XM_032911458 XP_032767349 forkhead box protein R1 protein-coding 626060699 LOC116889737 probable cytosol aminopeptidase 22301074;30032202 116889737 MODEL JAAIVD010000071;XM_032890609 XP_032746500 protein-coding 626060700 Cnot8 CCR4-NOT transcription complex subunit 8 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN CCR4-NOT complex (ortholog); nucleus (ortholog) 9 40121133 40134443 - 22301074;30032202 116909110 MODEL JAAIVD010000002;XM_032912585;XM_032912586 XP_032768476;XP_032768477 protein-coding 626060715 LOC116913530 T cell receptor alpha variable 22-like 12 65733302 65733848 - 116913530 MODEL JAAIVD010000007 pseudo 626060716 Fndc3a fibronectin type III domain containing 3A INVOLVED IN cell-cell adhesion (ortholog); fertilization (ortholog); Sertoli cell development (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 12 51952913 52114721 + 22301074 116913755 MODEL JAAIVD010000007;XM_032918062 XP_032773953 fibronectin type-III domain-containing protein 3A protein-coding 626060746 Znf777 zinc finger protein 777 INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); protein heterooligomerization (ortholog); FOUND IN nucleus (ortholog) 6 92837621 92865008 + 30032202 116903869 MODEL JAAIVD010000024;XM_032906620;XM_032906621;XM_032906622 XP_032762511;XP_032762512;XP_032762513 protein-coding 626060762 LOC116894386 olfactory receptor 13A1-like 2 156821090 156822040 - 22301074 116894386 MODEL JAAIVD010000001;XM_032896092 XP_032751983 protein-coding 626060766 LOC116906463 small nucleolar RNA SNORA17 7 31971195 31971320 + 116906463 MODEL JAAIVD010000026;XR_004388718 snorna 626060769 LOC116893381 interferon lambda-2-like 2 167490930 167493790 + 22301074;30032202 116893381 MODEL JAAIVD010000001;XM_032895179 XP_032751070 protein-coding 626060777 Fbxw5 F-box and WD repeat domain containing 5 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); regulation of centrosome duplication (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 5 11671158 11675720 - 22301074;30032202 116901293 MODEL JAAIVD010000023;XM_032903086;XM_032903087;XM_032903088;XM_032903089;XM_032903090;XM_032903091 XP_032758977;XP_032758978;XP_032758979;XP_032758980;XP_032758981;XP_032758982 F-box/WD repeat-containing protein 5 protein-coding 626060805 LOC116910279 olfactory receptor 2W3-like 9 39180610 39181504 - 116910279 MODEL JAAIVD010000002 pseudo 626060806 Eif3i eukaryotic translation initiation factor 3 subunit I ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); Neoplastic Cell Transformation (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) 1 28550587 28557972 + 22301074;30032202 116896096 MODEL JAAIVD010000025;XM_032897070 XP_032752961 protein-coding 626060821 LOC116907000 uncharacterized LOC116907000 8 103969827 103976391 - 116907000 MODEL JAAIVD010000027;XR_004388794 ncrna 626060826 LOC116910932 60S ribosomal protein L17-like 10 62441597 62442132 - 116910932 MODEL JAAIVD010000005 pseudo 626060827 LOC116907768 olfactory receptor 18-like 8 16460635 16461589 + 116907768 MODEL JAAIVD010000027 pseudo 626060828 Pde1a phosphodiesterase 1A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); calmodulin-activated 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); INVOLVED IN cGMP catabolic process (ortholog); regulation of smooth muscle cell apoptotic process (ortholog); regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Left Ventricular Hypertrophy (ortholog); FOUND IN neuronal cell body (ortholog); sperm flagellum (ortholog) 5 57051859 57325909 - 22301074 116901564 MODEL JAAIVD010000023;XM_032903560 XP_032759451 calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A protein-coding 626060848 LOC116890994 protein FAM111A-like 2 12589579 12604863 + 116890994 MODEL JAAIVD010000001;XM_032891668;XM_032891669;XM_032891670 XP_032747559;XP_032747560;XP_032747561 protein-coding 626060863 Dlk1 delta like non-canonical Notch ligand 1 INVOLVED IN bone mineralization (ortholog); cell differentiation (ortholog); embryonic skeletal system development (ortholog); PARTICIPATES IN forkhead class A signaling pathway; Notch signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH biliary atresia (ortholog); central precocious puberty (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 7 127005117 127014663 + 22301074;30032202 116905462 MODEL JAAIVD010000026;XM_032908423;XM_032908424;XM_032908425;XM_032908426;XM_032908427 XP_032764314;XP_032764315;XP_032764316;XP_032764317;XP_032764318 protein delta homolog 1 protein-coding 626060883 LOC116894987 small nucleolar RNA SNORA19 2 256471 256601 - 116894987 MODEL JAAIVD010000001;XR_004387178 snorna 626060886 LOC116883579 40S ribosomal protein S29-like 14 42299938 42300108 + 116883579 MODEL JAAIVD010000009 pseudo 626060887 LOC116888155 glycogen [starch] synthase, muscle-like X 113376944 113378785 + 116888155 MODEL JAAIVD010000014 pseudo 626060888 LOC116895993 killer cell lectin-like receptor 4 3 166863773 166869290 - 116895993 MODEL JAAIVD010000012 pseudo 626060889 LOC116900333 olfactory receptor 4X2-like 5 64582812 64583741 + 22301074 116900333 MODEL JAAIVD010000023;XM_032902089 XP_032757980 protein-coding 626060892 Simc1 SUMO interacting motifs containing 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); SUMO polymer binding (ortholog); FOUND IN cytoplasm (ortholog); PML body (ortholog); sarcomere (ortholog) 14 72846905 72893220 + 116915206 MODEL JAAIVD010000009;XM_032919577 XP_032775468 SUMO-interacting motif-containing protein 1 protein-coding 626060907 LOC116898411 zinc finger protein 844-like 4 87305875 87306555 - 116898411 MODEL JAAIVD010000003 pseudo 626060908 LOC116905563 transcription factor BTF3-like 7 82943513 82945017 - 116905563 MODEL JAAIVD010000026 pseudo 626060909 Znf532 zinc finger protein 532 ASSOCIATED WITH diastolic heart failure (ortholog) 15 65582101 65691101 - 116884972 MODEL JAAIVD010000010;XM_032886178;XM_032886180;XM_032886181;XM_032886182;XM_032886183;XM_032886184;XM_032886185;XM_032886186;XM_032886187;XM_032886188;XM_032886189;XM_032886191;XM_032886192 XP_032742069;XP_032742071;XP_032742072;XP_032742073;XP_032742074;XP_032742075;XP_032742076;XP_032742077;XP_032742078;XP_032742079;XP_032742080;XP_032742082;XP_032742083 protein-coding 626060953 LOC116901606 pyruvate kinase PKM-like 1 123561047 123575385 - 22301074;30032202 116901606 MODEL JAAIVD010000025;XM_032903678 XP_032759569 protein-coding 626060958 LOC116888520 uncharacterized LOC116888520 X 79799044 79829199 - 116888520 MODEL JAAIVD010000014;XR_004386318 ncrna 626060964 LOC116895999 translation initiation factor IF-2-like 3 168351455 168499975 + 116895999 MODEL JAAIVD010000012;XM_032897023 XP_032752914 protein-coding 626060969 LOC116910724 small nucleolar RNA SNORA17 9 80052996 80053115 + 116910724 MODEL JAAIVD010000002 pseudo 626060970 LOC116914412 rho GTPase-activating protein 7 13 50482126 50525332 + 22301074;30032202;7835339 116914412 MODEL D31962;JAAIVD010000008;XM_032918669 BAA21675;XP_032774560 RhoGAP protein-coding 626060988 LOC116893143 importin subunit alpha-1-like 2 90773585 90775152 + 116893143 MODEL JAAIVD010000001 pseudo 626060989 LOC116891625 membrane-spanning 4-domains subfamily A member 6D-like 2 11277570 11284910 + 22301074 116891625 MODEL JAAIVD010000001;XM_032892832 XP_032748723 protein-coding 626060996 Atp5f1a ATP synthase F1 subunit alpha ENCODES a protein that exhibits ADP binding (ortholog); angiostatin binding (ortholog); ATP binding (ortholog); INVOLVED IN ATP biosynthetic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to nitric oxide (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); combined oxidative phosphorylation deficiency 22 (ortholog); Endotoxemia (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) 15 54321425 54329683 - 22301074;30032202 116884290 MODEL JAAIVD010000010;XM_032885388 XP_032741279 ATP synthase subunit alpha, mitochondrial protein-coding 626061012 LOC116889491 small nucleolar RNA SNORA48 X 87409950 87410093 - 116889491 MODEL JAAIVD010000014;XR_004386441 snorna 626061015 Ankle1 ankyrin repeat and LEM domain containing 1 ENCODES a protein that exhibits endonuclease activity (ortholog); INVOLVED IN determination of adult lifespan (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 13593245 13596832 - 22301074;30032202 116915096 MODEL JAAIVD010000008;XM_032919523;XM_032919524 XP_032775414;XP_032775415 ankyrin repeat and LEM domain-containing protein 1 protein-coding 626061030 LOC116894371 zinc finger protein 431-like 2 156217691 156220118 - 30032202 116894371 MODEL JAAIVD010000001;XM_032896077 XP_032751968 protein-coding 626061037 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60805068 60805141 - 116897681 MODEL JAAIVD010000012 trna 626061038 LOC116904690 small nucleolar RNA SNORA48 6 151078739 151078881 - 116904690 MODEL JAAIVD010000024;XR_004388386 snorna 626061041 Tpk1 thiamin pyrophosphokinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thiamine diphosphokinase activity (ortholog); UTP thiamine diphosphokinase activity (ortholog); INVOLVED IN regulation of pyruvate decarboxylation to acetyl-CoA (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); Thiamine Metabolism Dysfunction Syndrome 5 (Episodic Encephalopathy Type) (ortholog); FOUND IN cytosol (ortholog) 6 96969160 97266252 + 22301074;30032202 116903885 MODEL JAAIVD010000024;XM_032906647;XM_032906648 XP_032762538;XP_032762539 protein-coding 626061055 Osmr oncostatin M receptor ENCODES a protein that exhibits cytokine binding (ortholog); growth factor binding (ortholog); oncostatin-M receptor activity (ortholog); INVOLVED IN oncostatin-M-mediated signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); response to cytokine (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); external side of plasma membrane (ortholog); oncostatin-M receptor complex (ortholog) 3 173632937 173687135 + 30032202 116897147 MODEL JAAIVD010000012;XM_032898815 XP_032754706 oncostatin-M-specific receptor subunit beta protein-coding 626061077 Gpr6 G protein-coupled receptor 6 ENCODES a protein that exhibits sphingosine-1-phosphate receptor activity (ortholog); INVOLVED IN positive regulation of cytosolic calcium ion concentration (ortholog) 18 40793857 40796402 - 22301074;30032202 116887374 MODEL JAAIVD010000013;XM_032888966 XP_032744857 G-protein coupled receptor 6 protein-coding 626061083 Nab1 NGFI-A binding protein 1 INVOLVED IN endochondral ossification (ortholog); myelination (ortholog); regulation of DNA-templated transcription (ortholog) 4 122896159 122934082 + 22301074;30032202 116899371 MODEL JAAIVD010000003;XM_032901083;XM_032901084;XM_032901085 XP_032756974;XP_032756975;XP_032756976 NGFI-A-binding protein 1 protein-coding 626061101 LOC116904667 U7 small nuclear RNA 6 18551596 18551659 - 116904667 MODEL JAAIVD010000024;XR_004388367 snrna 626061104 LOC116886771 5S ribosomal RNA 17 43167534 43167653 - 116886771 MODEL JAAIVD010000011 pseudo 626061105 LOC116900059 histone deacetylase 1-like 5 5871878 5872704 - 116900059 MODEL JAAIVD010000023 pseudo 626061106 Anapc16 anaphase promoting complex subunit 16 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytosol (ortholog); kinetochore (ortholog) 18 25816476 25830184 - 22301074;30032202 116886920 MODEL JAAIVD010000013;XM_032888399;XM_032888400 XP_032744290;XP_032744291 anaphase-promoting complex subunit 16 protein-coding 626061118 LOC116883552 heterogeneous nuclear ribonucleoprotein A1-like 14 42248996 42250034 - 116883552 MODEL JAAIVD010000009 pseudo 626061119 LOC116915016 iron-sulfur cluster assembly 1 homolog, mitochondrial-like 13 10525293 10525782 + 116915016 MODEL JAAIVD010000008 pseudo 626061120 LOC116912878 TNF receptor-associated factor 1-like 11 51220289 51221496 - 116912878 MODEL JAAIVD010000006 pseudo 626061121 LOC116908580 alanyl-tRNA editing protein Aarsd1 9 60700308 60710917 - 22301074;30032202 116908580 MODEL JAAIVD010000002;XM_032911795 XP_032767686 protein-coding 626061137 Amdhd2 amidohydrolase domain containing 2 ENCODES a protein that exhibits N-acetylgalactosamine-6-phosphate deacetylase activity (ortholog); N-acetylglucosamine-6-phosphate deacetylase activity (ortholog); INVOLVED IN negative regulation of UDP-N-acetylglucosamine biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway 9 1452423 1461185 - 22301074;30032202 116908734 MODEL JAAIVD010000002;XM_032912080 XP_032767971 N-acetylglucosamine-6-phosphate deacetylase protein-coding 626061152 Cep41 centrosomal protein 41 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 6 108868884 108908552 + 30032202 116903999 MODEL JAAIVD010000024;XM_032906804;XM_032906805 XP_032762695;XP_032762696 centrosomal protein of 41 kDa protein-coding 626061168 LOC116902777 transforming protein RhoA-like 6 75650292 75651673 - 22301074;30032202 116902777 MODEL JAAIVD010000024;XM_032905119 XP_032761010 protein-coding 626061173 LOC116887710 popy Class I histocompatibility antigen, A-1 alpha chain-like 18 9586496 9588620 - 116887710 MODEL JAAIVD010000013 pseudo 626061174 Rbm28 RNA binding motif protein 28 PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH alopecia, neurologic defects, and endocrinopathy syndrome (ortholog); microcephaly (ortholog); FOUND IN nucleolus (ortholog) 6 110398975 110437654 + 22301074 116904023 MODEL JAAIVD010000024;XM_032906852 XP_032762743 RNA-binding protein 28 protein-coding 626061197 LOC116889486 small nucleolar RNA SNORA55 X 32635258 32635395 - 116889486 MODEL JAAIVD010000014;XR_004386437 snorna 626061200 LOC116894642 transcription factor BTF3-like 2 199010109 199010694 + 116894642 MODEL JAAIVD010000001 pseudo 626061201 B3glct beta 3-glucosyltransferase ENCODES a protein that exhibits glycosyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Peters plus syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 16 4095352 4178909 - 22301074;30032202 116885539 MODEL JAAIVD010000004;XM_032886836 XP_032742727 beta-1,3-glucosyltransferase protein-coding 626061220 LOC116902925 hyaluronidase-like 6 114585914 114598395 - 22301074;30032202 116902925 MODEL JAAIVD010000024;XM_032905249 XP_032761140 protein-coding 626061228 Dlx2 distal-less homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cartilage development (ortholog); cerebral cortex GABAergic interneuron differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleus (ortholog) 5 48837012 48840288 - 22301074;30032202 116900194 MODEL JAAIVD010000023;XM_032901953 XP_032757844 homeobox protein DLX-2 protein-coding 626061235 Dnajc18 DnaJ heat shock protein family (Hsp40) member C18 FOUND IN endoplasmic reticulum membrane (ortholog) 15 8672877 8701864 + 30032202 116884569 MODEL JAAIVD010000010;XM_032885712;XM_032885713 XP_032741603;XP_032741604 dnaJ homolog subfamily C member 18 protein-coding 626061251 Ankrd34c ankyrin repeat domain 34C 8 81647031 81667887 + 22301074 116907710 MODEL JAAIVD010000027;XM_032910834;XM_032910835 XP_032766725;XP_032766726 ankyrin repeat domain-containing protein 34C protein-coding 626061261 Cimap1d CIMAP1 family member D FOUND IN cytoplasmic microtubule (ortholog) 1 155227938 155233127 + 30032202 116889871 MODEL JAAIVD010000025;XM_032890696 XP_032746587 Odf3l2 outer dense fiber of sperm tails 3 like 2;outer dense fiber protein 3-like protein 2 protein-coding 626061267 LOC116904364 vomeronasal type-1 receptor 90-like 6 83731090 83750622 + 116904364 MODEL JAAIVD010000024 pseudo 626061268 Cux1 cut like homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN inner ear auditory receptor cell differentiation (ortholog); kidney development (ortholog); lung development (ortholog); ASSOCIATED WITH Carcinogenesis (ortholog); colorectal cancer (ortholog); Duane retraction syndrome (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 16 17449881 17770317 + 22301074 116885134 MODEL JAAIVD010000004;XM_032886309;XM_032886310;XM_032886311;XM_032886312;XM_032886313;XM_032886315;XM_032886316;XM_032886317;XM_032886318 XP_032742200;XP_032742201;XP_032742202;XP_032742203;XP_032742204;XP_032742206;XP_032742207;XP_032742208;XP_032742209 homeobox protein cut-like 1;protein CASP protein-coding 626061329 Rbl1 RB transcriptional corepressor like 1 ENCODES a protein that exhibits promoter-specific chromatin binding (ortholog); INVOLVED IN negative regulation of cellular senescence (ortholog); negative regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN G1/S transition pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 5 136487609 136550989 - 22301074;30032202 116902221 MODEL JAAIVD010000023;XM_032904624 XP_032760515 retinoblastoma-like protein 1 protein-coding 626061355 Ldhd lactate dehydrogenase D ENCODES a protein that exhibits (2R)-2-hydroxycarboxylate dehydrogenase activity (ortholog); D-lactate dehydrogenase (FAD) activity (ortholog); lactate dehydrogenase activity (ortholog); INVOLVED IN lactate catabolic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH Lactic Aciduria due to D-Lactic Acid (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 17 31310845 31315600 - 22301074;30032202 116886491 MODEL JAAIVD010000011;XM_032887992 XP_032743883 probable D-lactate dehydrogenase, mitochondrial protein-coding 626061370 Rufy4 RUN and FYVE domain containing 4 ENCODES a protein that exhibits dynactin binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to interleukin-4 (ortholog); multivesicular body-lysosome fusion (ortholog); FOUND IN autophagosome (ortholog); endolysosome (ortholog) 4 147578825 147597064 + 30032202 116898219 MODEL JAAIVD010000003;XM_032899576 XP_032755467 RUN and FYVE domain-containing protein 4 protein-coding 626061383 LOC116891203 cytochrome P450 2C23 2 43534536 43559344 - 22301074;30032202 116891203 MODEL JAAIVD010000001;XM_032892028;XM_032892029;XM_032892030 XP_032747919;XP_032747920;XP_032747921 protein-coding 626061403 LOC116883556 histone H1.3 14 42576571 42578024 + 22301074 116883556 MODEL JAAIVD010000009;XM_032884736 XP_032740627 protein-coding 626061408 LOC116912540 estrogen sulfotransferase-like 11 1308148 1325520 + 22301074;30032202 116912540 MODEL JAAIVD010000006;XM_032916642 XP_032772533 protein-coding 626061420 Slc30a2 solute carrier family 30 member 2 ENCODES a protein that exhibits identical protein binding (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); zinc export across plasma membrane (ortholog); zinc ion import into lysosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neonatal Zinc Deficiency due to Low Breast Milk Zinc (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); endosome membrane (ortholog); late endosome (ortholog) 1 23892365 23904612 - 30032202 116886713 MODEL JAAIVD010000025;XM_032888225;XM_032888228 XP_032744116;XP_032744119 zinc transporter 2 protein-coding 626061436 Trak2 trafficking kinesin protein 2 ENCODES a protein that exhibits enzyme binding (ortholog); GABA receptor binding (ortholog); kinesin binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); dendritic transport of mitochondrion (ortholog); endosome to lysosome transport (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN axonal growth cone (ortholog); cytoplasm (ortholog); dendrite (ortholog) 4 133531663 133591464 + 30032202 116899418 MODEL JAAIVD010000003;XM_032901156;XM_032901157;XM_032901158 XP_032757047;XP_032757048;XP_032757049 trafficking kinesin-binding protein 2 protein-coding 626061463 LOC116888220 coiled-coil domain-containing protein 47-like 1 74699568 74701125 + 116888220 MODEL JAAIVD010000025 pseudo 626061464 LOC116914168 U6 spliceosomal RNA 12 52337890 52337996 - 116914168 MODEL JAAIVD010000007;XR_004389713 snrna 626061467 LOC116910119 olfactory receptor 2AK2-like 9 39191996 39192916 + 22301074 116910119 MODEL JAAIVD010000002;XM_032913952 XP_032769843 protein-coding 626061470 LOC116887496 uncharacterized LOC116887496 18 9242078 9242561 + 116887496 MODEL JAAIVD010000013;XR_004386222 ncrna 626061474 Adam15 ADAM metallopeptidase domain 15 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); integrin binding (ortholog); metallopeptidase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); COVID-19 (ortholog); osteoarthritis (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog) 3 64320156 64330802 + 22301074;30032202 116896647 MODEL JAAIVD010000012;XM_032897972;XM_032897973;XM_032897974;XM_032897975;XM_032897976 XP_032753863;XP_032753864;XP_032753865;XP_032753866;XP_032753867 disintegrin and metalloproteinase domain-containing protein 15 protein-coding 626061509 Fmn1 formin 1 ENCODES a protein that exhibits microtubule binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); forelimb morphogenesis (ortholog); gene expression (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) 5 91562877 91925937 + 22301074;30032202 116901752 MODEL JAAIVD010000023;XM_032903890;XM_032903891 XP_032759781;XP_032759782 formin-1 protein-coding 626061536 Ros1 ROS proto-oncogene 1, receptor tyrosine kinase ENCODES a protein that exhibits protein phosphatase binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell differentiation (ortholog); columnar/cuboidal epithelial cell development (ortholog); gene expression (ortholog); ASSOCIATED WITH Dwarfism (ortholog); high grade glioma (ortholog); lung adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); perinuclear region of cytoplasm (ortholog) 18 29334962 29413371 - 22301074 116887391 MODEL JAAIVD010000013;XM_032888985 XP_032744876 proto-oncogene tyrosine-protein kinase ROS protein-coding 626061567 F13b coagulation factor XIII B chain INVOLVED IN blood coagulation (ortholog); blood coagulation, fibrin clot formation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH cholesteatoma (ortholog); factor XIII deficiency (ortholog); Factor XIII, B Subunit, Deficiency Of (ortholog) 10 19875925 19912921 - 116911491 MODEL JAAIVD010000005;XM_032915474 XP_032771365 protein-coding 626061580 Fam47e family with sequence similarity 47 member E ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 11 5381500 5419371 + 116912449 MODEL JAAIVD010000006;XM_032916518 XP_032772409 protein FAM47E protein-coding 626061592 Syngr3 synaptogyrin 3 ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN positive regulation of transporter activity (ortholog); regulated exocytosis (ortholog); regulation of neurotransmitter uptake (ortholog); FOUND IN neuromuscular junction (ortholog); synapse (ortholog); synaptic vesicle (ortholog) 9 1968455 1973805 - 30032202 116909616 MODEL JAAIVD010000002;XM_032913241 XP_032769132 synaptogyrin-3 protein-coding 626061600 LOC116890422 U7 small nuclear RNA 1 91802003 91802061 - 116890422 MODEL JAAIVD010000025;XR_004386621 snrna 626061603 Msrb2 methionine sulfoxide reductase B2 ENCODES a protein that exhibits actin binding (ortholog); peptide-methionine (R)-S-oxide reductase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); protein repair (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; FOUND IN mitochondrion (ortholog) 14 4702743 4726126 - 22301074;30032202 116883756 MODEL JAAIVD010000009;XM_032885001 XP_032740892 methionine-R-sulfoxide reductase B2, mitochondrial protein-coding 626061612 LOC116895984 Krueppel-like factor 17 1 80133026 80139958 + 30032202 116895984 MODEL JAAIVD010000025;XM_032897031 XP_032752922 protein-coding 626061617 LOC116890484 small nucleolar RNA SNORA55 1 155923566 155923693 + 116890484 MODEL JAAIVD010000025;XR_004386672 snorna 626061620 Ccdc77 coiled-coil domain containing 77 FOUND IN centrosome (ortholog) 6 26400763 26422947 + 30032202 116903332 MODEL JAAIVD010000024;XM_032905778 XP_032761669 coiled-coil domain-containing protein 77 protein-coding 626061635 LOC116891796 hemoglobin subunit beta-H0 2 101783064 101784728 + 22301074;30032202 116891796 MODEL JAAIVD010000001;XM_032893150 XP_032749041 protein-coding 626061641 LOC116890946 S-formylglutathione hydrolase-like 2 9656238 9657081 + 116890946 MODEL JAAIVD010000001 pseudo 626061642 Mrps10 mitochondrial ribosomal protein S10 ASSOCIATED WITH Zellweger syndrome (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 4 82502805 82512719 - 30032202 116899087 MODEL JAAIVD010000003;XM_032900589 XP_032756480 28S ribosomal protein S10, mitochondrial protein-coding 626061653 Adcy2 adenylate cyclase 2 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); adenylate cyclase binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cAMP biosynthetic process (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; endothelin signaling pathway; ASSOCIATED WITH asthma (ortholog); bipolar disorder (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); membrane (ortholog) 2 199950682 200361187 - 22301074;30032202 116892903 MODEL JAAIVD010000001;XM_032894822 XP_032750713 adenylate cyclase type 2 protein-coding 626061682 LOC116889093 cleavage and polyadenylation specificity factor subunit 4-like X 16160631 16161359 + 116889093 MODEL JAAIVD010000014 pseudo 626061683 Lrr1 leucine rich repeat protein 1 7 82832735 82840815 + 22301074 116905111 MODEL JAAIVD010000026;XM_032907848 XP_032763739 leucine-rich repeat protein 1 protein-coding 626061690 Tmem126b transmembrane protein 126B INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); mitochondrion organization (ortholog); response to food (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrion (ortholog) 2 110566043 110577932 + 30032202 116893590 MODEL JAAIVD010000001;XM_032895288 XP_032751179 complex I assembly factor TMEM126B, mitochondrial protein-coding 626061699 LOC116887753 U6 spliceosomal RNA 18 8025537 8025643 - 116887753 MODEL JAAIVD010000013;XR_004386254 snrna 626061702 LOC116900775 60S ribosomal protein L7a-like 1 31274935 31278627 + 116900775 MODEL JAAIVD010000025 pseudo 626061703 LOC116892478 carcinoembryonic antigen-related cell adhesion molecule 1-like 2 169919228 169926118 - 30032202 116892478 MODEL JAAIVD010000001;XM_032894207 XP_032750098 protein-coding 626061710 LOC116904463 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 6 134162781 134165446 - 116904463 MODEL JAAIVD010000024 pseudo 626061711 LOC116887327 olfactory receptor 10C1-like 18 10654708 10655679 + 22301074 116887327 MODEL JAAIVD010000013;XM_032888920 XP_032744811 protein-coding 626061715 LOC116894899 U6 spliceosomal RNA 2 8366199 8366304 + 116894899 MODEL JAAIVD010000001;XR_004387104 snrna 626061718 LOC116904558 natural killer cells antigen CD94 6 17997624 18008833 - 30032202 116904558 MODEL JAAIVD010000024;XM_032907352 XP_032763243 protein-coding 626061730 LOC116888777 polypyrimidine tract-binding protein 1-like X 16751717 16753477 - 22301074;30032202 116888777 MODEL JAAIVD010000014;XM_032890062;XM_032890063 XP_032745953;XP_032745954 protein-coding 626061737 LOC116893880 cofilin-1-like 2 69333661 69334165 - 116893880 MODEL JAAIVD010000001 pseudo 626061738 LOC116908440 U2 spliceosomal RNA 8 31430670 31430868 - 116908440 MODEL JAAIVD010000027;XR_004388967 snrna 626061741 LOC116892274 uncharacterized LOC116892274 2 163494596 163498611 + 116892274 MODEL JAAIVD010000001;XR_004386936 ncrna 626061746 Znf330 zinc finger protein 330 FOUND IN chromosome, centromeric region (ortholog); ciliary basal body (ortholog); cilium (ortholog) 17 17436113 17447059 + 22301074;30032202 116886343 MODEL JAAIVD010000011;XM_032887793 XP_032743684 protein-coding 626061760 Psma1 proteasome 20S subunit alpha 1 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 87249272 87260266 + 22301074;30032202 116891633 MODEL JAAIVD010000001;XM_032892846 XP_032748737 proteasome subunit alpha type-1 protein-coding 626061774 Gask1a golgi associated kinase 1A FOUND IN endoplasmic reticulum (ortholog); extracellular region (ortholog); Golgi apparatus (ortholog) 8 113122519 113139986 + 30032202 116907988 MODEL JAAIVD010000027;XM_032911233;XM_032911234 XP_032767124;XP_032767125 Golgi-associated kinase 1A protein-coding 626061785 Leng8 leukocyte receptor cluster member 8 2 176647478 176658776 + 30032202 116892640 MODEL JAAIVD010000001;XM_032894460 XP_032750351 protein-coding 626061805 Mettl25 methyltransferase like 25 1 184095118 184176528 - 116908650 MODEL JAAIVD010000025;XM_032911921;XM_032911930 XP_032767812;XP_032767821 methyltransferase-like protein 25 protein-coding 626061825 Atf6b activating transcription factor 6 beta ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of ATF6-mediated unfolded protein response (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 7326652 7334667 + 30032202 116886835 MODEL JAAIVD010000013;XM_032888283;XM_032888284;XR_004386188 XP_032744174;XP_032744175 cyclic AMP-dependent transcription factor ATF-6 beta protein-coding 626061850 Washc2c WASH complex subunit 2C ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); negative regulation of barbed-end actin filament capping (ortholog); protein localization to endosome (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) 6 30469750 30522973 - 30032202 116903370 MODEL JAAIVD010000024;XM_032905856 XP_032761747 protein-coding 626061884 C9H17orf50 chromosome 9 C17orf50 homolog 9 87243299 87244408 - 116910380 MODEL JAAIVD010000002;XM_032914226 XP_032770117 uncharacterized protein C17orf50 homolog protein-coding 626061890 Ibsp integrin binding sialoprotein ENCODES a protein that exhibits integrin binding (ortholog); small molecule binding (ortholog); INVOLVED IN bone mineralization (ortholog); cell adhesion (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Neoplasm Metastasis (ortholog); Osteolysis (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) 11 14357002 14366707 + 22301074;30032202 116912316 MODEL JAAIVD010000006;XM_032916335 XP_032772226 bone sialoprotein 2 protein-coding 626061900 Zbed6 zinc finger BED-type containing 6 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of muscle cell differentiation (ortholog); FOUND IN centriolar satellite (ortholog); cytoplasm (ortholog); nucleolus (ortholog) 10 2032175 2038505 + 22301074;30032202 116911702 MODEL JAAIVD010000005;XM_032915666 XP_032771557 zinc finger BED domain-containing protein 6 protein-coding 626061905 LOC116898877 OX-2 membrane glycoprotein-like 4 30233038 30262429 - 22301074;30032202 116898877 MODEL JAAIVD010000003;XM_032900249 XP_032756140 protein-coding 626061915 LOC116907418 olfactory receptor 143 8 32031422 32032369 + 22301074;30032202 116907418 MODEL JAAIVD010000027;XM_032910379 XP_032766270 protein-coding 626061919 Znf385c zinc finger protein 385C 9 59927822 59969204 - 22301074;30032202 116909424 MODEL JAAIVD010000002;XM_032912998 XP_032768889 protein-coding 626061931 LOC116889800 inosine-5'-monophosphate dehydrogenase-like 30032202 116889800 MODEL JAAIVD010000620;XM_032890649 XP_032746540 protein-coding 626061932 Ak9 adenylate kinase 9 ENCODES a protein that exhibits nucleoside diphosphate kinase activity (ortholog); nucleoside monophosphate kinase activity (ortholog); ASSOCIATED WITH normal pressure hydrocephalus (ortholog); spermatogenic failure 89 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 18 41025996 41136421 + 22301074;30032202 116887066 MODEL JAAIVD010000013;XM_032888566 XP_032744457 protein-coding 626061975 Clcn4 chloride voltage-gated channel 4 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); non-motile cilium assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN ciliary base (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) X 27594640 27660850 + 22301074;30032202 116889411 MODEL JAAIVD010000014;XM_032890514;XM_032890515 XP_032746405;XP_032746406 H(+)/Cl(-) exchange transporter 4 protein-coding 626061996 LOC116884729 microtubule-associated proteins 1A/1B light chain 3B-like 1 211906077 211907911 + 116884729 MODEL JAAIVD010000025 pseudo 626061997 Zcchc17 zinc finger CCHC-type containing 17 ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN cytosolic large ribosomal subunit (ortholog); nucleolus (ortholog) 1 27798241 27840004 + 22301074;30032202 116895935 MODEL JAAIVD010000025;XM_032897004;XM_032897005;XM_032897008 XP_032752895;XP_032752896;XP_032752899 nucleolar protein of 40 kDa protein-coding 626062015 LOC116889901 olfactory receptor 6C2-like 1 160128102 160129037 + 22301074;30032202 116889901 MODEL JAAIVD010000025;XM_032890724 XP_032746615 protein-coding 626062018 LOC116890198 cysteine-rich PDZ-binding protein-like 1 261095097 261095428 - 116890198 MODEL JAAIVD010000025 pseudo 626062019 LOC116895560 40S ribosomal protein SA-like 3 132411515 132412391 - 116895560 MODEL JAAIVD010000012 pseudo 626062020 LOC116898617 40S ribosomal protein S11-like 4 2101615 2102162 - 22301074;30032202 116898617 MODEL JAAIVD010000003;XM_032899827 XP_032755718 protein-coding 626062025 Narf nuclear prelamin A recognition factor ENCODES a protein that exhibits lamin binding (ortholog); FOUND IN lamin filament (ortholog); nuclear lumen (ortholog); nucleolus (ortholog) 9 62764149 62781851 - 30032202 116908731 MODEL JAAIVD010000002;XM_032912075 XP_032767966 protein-coding 626062040 Cd55 CD55 molecule (Cromer blood group) ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); lipid binding (ortholog); virus receptor activity (ortholog); INVOLVED IN maternal process involved in parturition (ortholog); negative regulation of complement activation (ortholog); positive regulation of CD4-positive, alpha-beta T cell activation (ortholog); PARTICIPATES IN complement system pathway; ASSOCIATED WITH amphetamine abuse (ortholog); breast cancer (ortholog); cervical cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 10 5367063 5393480 + 116911198 MODEL JAAIVD010000005;XM_032915069;XM_032915070;XM_032915071 XP_032770960;XP_032770961;XP_032770962 complement decay-accelerating factor protein-coding 626062061 Reps1 RALBP1 associated Eps domain containing 1 ENCODES a protein that exhibits SH3 domain binding (ortholog); ASSOCIATED WITH neurodegeneration with brain iron accumulation (ortholog); Neurodegeneration with Brain Iron Accumulation 7 (ortholog); FOUND IN clathrin-coated pit (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 218765037 218834302 - 22301074;30032202 116892991 MODEL JAAIVD010000001;XM_032894952;XM_032894953;XM_032894954;XM_032894955 XP_032750843;XP_032750844;XP_032750845;XP_032750846 ralBP1-associated Eps domain-containing protein 1 protein-coding 626062089 LOC116900079 uncharacterized LOC116900079 5 10436558 10438822 - 116900079 MODEL JAAIVD010000023;XR_004387916 ncrna 626062094 LOC116900359 olfactory receptor 5W2-like 5 69326981 69327919 + 22301074;30032202 116900359 MODEL JAAIVD010000023;XM_032902111 XP_032758002 protein-coding 626062098 Atl2 atlastin GTPase 2 ENCODES a protein that exhibits GTPase-dependent fusogenic activity (ortholog); INVOLVED IN endoplasmic reticulum membrane fusion (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); endoplasmic reticulum tubular network membrane organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) 7 13168565 13210081 + 22301074;30032202 116905861 MODEL JAAIVD010000026;XM_032908843;XM_032908844;XM_032908845;XR_004388572 XP_032764734;XP_032764735;XP_032764736 atlastin-2 protein-coding 626062124 Fam76b family with sequence similarity 76 member B INVOLVED IN mRNA stabilization (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of macrophage activation (ortholog); FOUND IN nuclear speck (ortholog) 8 9680945 9703381 + 116906786 MODEL JAAIVD010000027;XM_032909642;XM_032909643;XM_032909644;XM_032909645;XM_032909646;XM_032909647;XM_032909648 XP_032765533;XP_032765534;XP_032765535;XP_032765536;XP_032765537;XP_032765538;XP_032765539 protein FAM76B protein-coding 626062161 LOC116895511 cytosolic purine 5'-nucleotidase-like 3 113518150 113519751 + 116895511 MODEL JAAIVD010000012 pseudo 626062162 LOC116886310 40S ribosomal protein S2-like 17 14349070 14349943 - 116886310 MODEL JAAIVD010000011 pseudo 626062163 Upk3bl2 uroplakin 3B like 2 16 17948282 17954404 - 116885684 MODEL JAAIVD010000004;XM_032886992 XP_032742883 uroplakin-3b-like protein 2 protein-coding 626062173 LOC116883716 protein arginine N-methyltransferase 1-like 14 16959148 16960193 + 116883716 MODEL JAAIVD010000009 pseudo 626062174 LOC116900244 olfactory receptor 998 5 62955084 62956028 + 22301074;30032202 116900244 MODEL JAAIVD010000023;XM_032901995 XP_032757886 protein-coding 626062177 LOC116913504 potassium channel subfamily K member 16-like 12 90061679 90069231 - 22301074;30032202 116913504 MODEL JAAIVD010000007;XM_032917706 XP_032773597 protein-coding 626062186 Cdc6 cell division cycle 6 ENCODES a protein that exhibits chromatin binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); cellular response to vasopressin (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); Meier-Gorlin syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 9 55519350 55532378 - 22301074;30032202 116910201 MODEL JAAIVD010000002;XM_032914065 XP_032769956 cell division control protein 6 homolog protein-coding 626062202 LOC116889380 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like X 78426530 78427115 - 116889380 MODEL JAAIVD010000014 pseudo 626062203 Cbx2 chromobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN development of primary sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,Xy Gonadal Dysgenesis, Complete, Sry-Related (ortholog); 46,XY sex reversal 5 (ortholog); FOUND IN euchromatin (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) 9 65004072 65012743 - 30032202 116909970 MODEL JAAIVD010000002;XM_032913748;XM_032913749 XP_032769639;XP_032769640 chromobox protein homolog 2 protein-coding 626062218 LOC116885689 uncharacterized LOC116885689 16 19349185 19354003 + 116885689 MODEL JAAIVD010000004;XR_004386034 ncrna 626062227 Aldoc aldolase, fructose-bisphosphate C ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); fructose-bisphosphate aldolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); epithelial cell differentiation (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); borna disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); postsynaptic cytosol (ortholog) 9 92113149 92116780 - 22301074;30032202 116909660 MODEL JAAIVD010000002;XM_032913313 XP_032769204 fructose-bisphosphate aldolase C protein-coding 626062240 Camkk1 calcium/calmodulin dependent protein kinase kinase 1 ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); positive regulation of protein kinase activity (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH nervous system disease (ortholog) 9 42467324 42490338 - 22301074;30032202 116909764 MODEL JAAIVD010000002;XM_032913450;XM_032913451;XM_032913452 XP_032769341;XP_032769342;XP_032769343 calcium/calmodulin-dependent protein kinase kinase 1 protein-coding 626062267 Myo15b myosin XVB ASSOCIATED WITH congenital myopathy (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN brush border (ortholog) 9 68167984 68203777 - 22301074 116910346 MODEL JAAIVD010000002;XM_032914201 XP_032770092 protein-coding 626062333 Armc2 armadillo repeat containing 2 INVOLVED IN cell morphogenesis (ortholog); cilium organization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); male infertility (ortholog); spermatogenic failure 38 (ortholog) 18 41590327 41689230 - 22301074;30032202 116887401 MODEL JAAIVD010000013;XM_032888994 XP_032744885 armadillo repeat-containing protein 2 protein-coding 626062353 LOC116885303 uncharacterized LOC116885303 16 35636877 35658277 - 116885303 MODEL JAAIVD010000004;XR_004386001 ncrna 626062357 LOC116907433 olfactory receptor 8B4-like 8 31513439 31514371 + 22301074;30032202 116907433 MODEL JAAIVD010000027;XM_032910403 XP_032766294 protein-coding 626062361 Znf804a zinc finger protein 804A INVOLVED IN positive regulation of dendritic spine maintenance (ortholog); positive regulation of gene expression (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog); schizophrenia (ortholog); substance-related disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendritic microtubule (ortholog) 5 59149393 59369509 + 30032202 116901571 MODEL JAAIVD010000023;XM_032903567 XP_032759458 protein-coding 626062369 Xpr1 xenotropic and polytropic retrovirus receptor 1 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); inositol hexakisphosphate binding (ortholog); phosphate transmembrane transporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transmembrane transport (ortholog); response to virus (ortholog); ASSOCIATED WITH basal ganglia disease (ortholog); calcinosis (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 10 34691580 34832535 - 30032202 116911370 MODEL JAAIVD010000005;XM_032915299 XP_032771190 protein-coding 626062388 Recql RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); DNA helicase activity (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN replication fork processing (ortholog); ASSOCIATED WITH Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 6 116543 140974 - 22301074;30032202 116903063 MODEL JAAIVD010000024;XM_032905361;XM_032905362 XP_032761252;XP_032761253 ATP-dependent DNA helicase Q1 protein-coding 626062411 LOC116900827 putative ankyrin repeat domain-containing protein 19 5 45937343 45946775 + 22301074 116900827 MODEL JAAIVD010000023;XM_032902530 XP_032758421 protein-coding 626062419 Ppp1r21 protein phosphatase 1 regulatory subunit 21 ENCODES a protein that exhibits mRNA binding (ortholog); protein-macromolecule adaptor activity (ortholog); RNA binding (ortholog); INVOLVED IN regulation of intracellular mRNA localization (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, FACIAL DYSMORPHISM, AND BRAIN ABNORMALITIES (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog) 7 4285123 4349193 - 30032202 116905737 MODEL JAAIVD010000026;XM_032908703 XP_032764594 protein-coding 626062445 LOC116912970 small nucleolar RNA SNORA48 11 71751301 71751444 - 116912970 MODEL JAAIVD010000006;XR_004389536 snorna 626062448 Pnpla4 patatin like domain 4, phospholipase and triacylglycerol lipase ENCODES a protein that exhibits acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); mono-olein transacylation activity (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; FOUND IN mitochondrion (ortholog) X 456969 461003 + 22301074;30032202 116889161 MODEL JAAIVD010000014;XM_032890327;XM_032890328;XM_032890329 XP_032746218;XP_032746219;XP_032746220 patatin like phospholipase domain containing 4;patatin-like phospholipase domain-containing protein 4 protein-coding 626062464 LOC116893597 interferon alpha-C-like 1 65593686 65594266 + 22301074;30032202 116893597 MODEL JAAIVD010000025;XM_032895338 XP_032751229 protein-coding 626062467 Cpne8 copine 8 1 263486143 263662538 - 30032202 116884124 MODEL JAAIVD010000025;XM_032885320 XP_032741211 copine-8 protein-coding 626062491 Tmem47 transmembrane protein 47 ASSOCIATED WITH Dandy-Walker syndrome (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog) X 40491117 40514285 + 22301074;30032202 116888626 MODEL JAAIVD010000014;XM_032889923 XP_032745814 protein-coding 626062498 LOC116883355 histone H2A type 1-B 14 41642692 41643095 + 22301074;30032202 116883355 MODEL JAAIVD010000009;XM_032884434 XP_032740325 protein-coding 626062503 Zc3h4 zinc finger CCCH-type containing 4 ENCODES a protein that exhibits chromatin binding (ortholog); promoter-specific chromatin binding (ortholog); RNA binding (ortholog); INVOLVED IN lncRNA catabolic process (ortholog); negative regulation of DNA-templated transcription, elongation (ortholog); negative regulation of lncRNA transcription (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 2 172625601 172662709 - 22301074;30032202 116892597 MODEL JAAIVD010000001;XM_032894377;XM_032894378 XP_032750268;XP_032750269 zinc finger CCCH domain-containing protein 4 protein-coding 626062525 Scn3a sodium voltage-gated channel alpha subunit 3 ENCODES a protein that exhibits calmodulin binding (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); cellular response to antibiotic (ortholog); membrane depolarization during action potential (ortholog); ASSOCIATED WITH bilateral perisylvian polymicrogyria (ortholog); complex partial epilepsy (ortholog); developmental and epileptic encephalopathy (ortholog); FOUND IN axon (ortholog); membrane (ortholog); neuronal cell body (ortholog) 5 42951022 43060217 - 22301074;30032202 116901460 MODEL JAAIVD010000023;XM_032903404;XM_032903405;XM_032903406;XM_032903407;XM_032903408 XP_032759295;XP_032759296;XP_032759297;XP_032759298;XP_032759299 sodium channel protein type 3 subunit alpha protein-coding 626062568 LOC116888386 40S ribosomal protein S19-like X 8285089 8285518 + 116888386 MODEL JAAIVD010000014 pseudo 626062569 Atp4b ATPase H+/K+ transporting subunit beta ENCODES a protein that exhibits heterocyclic compound binding (ortholog); INVOLVED IN pH reduction (ortholog); potassium ion transmembrane transport (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; esomeprazole pharmacokinetics pathway; ASSOCIATED WITH atrophic gastritis (ortholog); autoimmune gastritis (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN potassium:proton exchanging ATPase complex (ortholog) 13 70311273 70320203 + 22301074;30032202 116915017 MODEL JAAIVD010000008;XM_032919421;XM_032919423 XP_032775312;XP_032775314 potassium-transporting ATPase subunit beta protein-coding 626062584 LOC116911258 60S ribosomal protein L36a-like 10 60176254 60176644 - 22301074;30032202 116911258 MODEL JAAIVD010000005;XM_032915161 XP_032771052 protein-coding 626062589 LOC116894838 U6 spliceosomal RNA 2 54605114 54605220 - 116894838 MODEL JAAIVD010000001;XR_004387053 snrna 626062592 Ntsr1 neurotensin receptor 1 ENCODES a protein that exhibits G protein-coupled neurotensin receptor activity (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); cAMP biosynthetic process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell surface (ortholog) 5 157593242 157640229 + 22301074;30032202 116902411 MODEL JAAIVD010000023;XM_032904941 XP_032760832 neurotensin receptor type 1 protein-coding 626062600 LOC116904369 uncharacterized LOC116904369 6 84461022 84675507 + 116904369 MODEL JAAIVD010000024;XM_032907247 XP_032763138 uncharacterized protein LOC116904369 protein-coding 626062607 LOC116897896 40S ribosomal protein S15-like 4 32857549 32857988 - 116897896 MODEL JAAIVD010000003 pseudo 626062608 LOC116906399 small nucleolar RNA SNORD113/SNORD114 family 7 57481889 57481965 - 116906399 MODEL JAAIVD010000026 pseudo 626062609 LOC116900733 heterogeneous nuclear ribonucleoprotein A1-like 5 137695171 137696227 - 116900733 MODEL JAAIVD010000023 pseudo 626062610 LOC116902159 spermine synthase-like 5 133806615 133808033 - 30032202 116902159 MODEL JAAIVD010000023;XM_032904499 XP_032760390 protein-coding 626062615 Capn9 calpain 9 ASSOCIATED WITH hypertension (ortholog); stomach cancer (ortholog) 17 44101643 44137846 + 22301074;30032202 116886504 MODEL JAAIVD010000011;XM_032888011 XP_032743902 calpain-9 protein-coding 626062639 Cdc14b cell division cycle 14B ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); positive regulation of ubiquitin protein ligase activity (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Premature Aging (ortholog); renal cell carcinoma (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); nucleolus (ortholog) 14 75281881 75360530 + 22301074;30032202 116883177 MODEL JAAIVD010000009;XM_032884216;XM_032884217;XM_032884218;XM_032884219;XM_032884220;XM_032884221;XM_032884222 XP_032740107;XP_032740108;XP_032740109;XP_032740110;XP_032740111;XP_032740112;XP_032740113 dual specificity protein phosphatase CDC14B protein-coding 626062667 Usp14 ubiquitin specific peptidase 14 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); endopeptidase inhibitor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); inflammatory response (ortholog); negative regulation of ERAD pathway (ortholog); ASSOCIATED WITH distal arthrogryposis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 15 34099439 34139272 + 22301074;30032202 116884827 MODEL JAAIVD010000010;XM_032886063;XM_032886064;XM_032886065 XP_032741954;XP_032741955;XP_032741956 ubiquitin carboxyl-terminal hydrolase 14 protein-coding 626062693 LOC116912858 S1 RNA-binding domain-containing protein 1-like 11 82203117 82209925 + 116912858 MODEL JAAIVD010000006 pseudo 626062694 Ecsit ECSIT signaling integrator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); mesoderm formation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 8 18324321 18336574 - 30032202 116906734 MODEL JAAIVD010000027;XM_032909549;XM_032909550;XM_032909551 XP_032765440;XP_032765441;XP_032765442 evolutionarily conserved signaling intermediate in Toll pathway, mitochondrial protein-coding 626062711 LOC116913084 uncharacterized LOC116913084 12 68132909 68135237 + 116913084 MODEL JAAIVD010000007;XR_004389592 ncrna 626062715 Lrrc36 leucine rich repeat containing 36 17 25140325 25192969 + 22301074 116886486 MODEL JAAIVD010000011;XM_032887989 XP_032743880 leucine-rich repeat-containing protein 36 protein-coding 626062732 Tmem72 transmembrane protein 72 FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); nucleus (ortholog) 6 29893664 29917011 + 116904617 MODEL JAAIVD010000024;XM_032907408 XP_032763299 protein-coding 626062741 Enox1 ecto-NOX disulfide-thiol exchanger 1 ENCODES a protein that exhibits NADH dehydrogenase activity (ortholog); protein disulfide isomerase activity (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN plasma membrane (ortholog) 12 46704458 46977311 - 22301074;30032202 116913876 MODEL JAAIVD010000007;XM_032918166;XM_032918167;XM_032918168 XP_032774057;XP_032774058;XP_032774059 protein-coding 626062768 Matcap2 microtubule associated tyrosine carboxypeptidase 2 8 18624977 18656425 + 116908313 MODEL JAAIVD010000027;XM_032911595;XM_032911596;XM_032911597;XM_032911599;XM_032911600 XP_032767486;XP_032767487;XP_032767488;XP_032767490;XP_032767491 Kiaa0895 uncharacterized protein KIAA0895 homolog protein-coding 626062792 Vnn1 vanin 1 ENCODES a protein that exhibits pantetheine hydrolase activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); cell-cell adhesion (ortholog); chronic inflammatory response (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH atopic dermatitis (ortholog); celiac disease (ortholog); Dyslipidemias (ortholog); FOUND IN extracellular space (ortholog) 2 209959790 209969696 + 22301074 116894660 MODEL JAAIVD010000001;XM_032896364 XP_032752255 pantetheinase protein-coding 626062803 Dok6 docking protein 6 ASSOCIATED WITH genetic disease (ortholog) 15 42479554 42815428 - 30032202 116884599 MODEL JAAIVD010000010;XM_032885739 XP_032741630 protein-coding 626062814 LOC116883372 uncharacterized LOC116883372 14 10383435 10386535 - 116883372 MODEL JAAIVD010000009;XR_004385753;XR_004385754 ncrna 626062822 LOC116905862 cytochrome P450 1B1 ENCODES a protein that exhibits estrogen 16-alpha-hydroxylase activity (ortholog); heme binding (ortholog); monooxygenase activity (ortholog); INVOLVED IN adrenal gland development (ortholog); angiogenesis (ortholog); arachidonate metabolic process (ortholog); PARTICIPATES IN phase I biotransformation pathway via cytochrome P450; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); adenoma (ortholog); anterior segment dysgenesis (ortholog); FOUND IN mitochondrion (ortholog) 7 13352650 13358426 + 22301074 116905862 MODEL JAAIVD010000026;XM_032908846 XP_032764737 protein-coding 626062829 Card19 caspase recruitment domain family member 19 FOUND IN mitochondrion (ortholog) 14 68187992 68200837 - 30032202 116883722 MODEL JAAIVD010000009;XM_032884945;XM_032884946 XP_032740836;XP_032740837 caspase recruitment domain-containing protein 19 protein-coding 626062840 LOC116888686 ubiquitin-conjugating enzyme E2 variant 1-like X 23275499 23275942 - 116888686 MODEL JAAIVD010000014 pseudo 626062841 Rps28 ribosomal protein S28 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); ribosomal small subunit biogenesis (ortholog); ribosome biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 15 with mandibulofacial dysostosis (ortholog); Weight Gain (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic small ribosomal subunit (ortholog); ribosome (ortholog) 1 158591732 158593110 + 1679328;22301074;30032202 116907020 MODEL JAAIVD010000025;X59277;XM_032909962 CAA41967;XP_032765853 40S ribosomal protein S28 protein-coding 626062849 Cdkl1 cyclin dependent kinase like 1 INVOLVED IN heart development (ortholog); FOUND IN nucleoplasm (ortholog) 7 83410774 83455927 - 22301074;30032202 116905124 MODEL JAAIVD010000026;XM_032907868 XP_032763759 cyclin-dependent kinase-like 1 protein-coding 626062862 LOC116890381 U6 spliceosomal RNA 1 205843481 205843588 - 116890381 MODEL JAAIVD010000025;XR_004386591 snrna 626062865 LOC116900803 uncharacterized LOC116900803 5 158770212 158771611 + 116900803 MODEL JAAIVD010000023;XR_004387954 ncrna 626062870 Antkmt adenine nucleotide translocase lysine methyltransferase ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine trimethylation (ortholog); FOUND IN mitochondrion (ortholog) 9 3056414 3058546 - 30032202 116908655 MODEL JAAIVD010000002;XM_032911928;XM_032911929 XP_032767819;XP_032767820 adenine nucleotide translocase lysine N-methyltransferase protein-coding 626062882 LOC116889780 small nucleolar RNA SNORA17 116889780 MODEL JAAIVD010000186;XR_004386509 snorna 626062883 LOC116913864 PRELI domain-containing protein 1, mitochondrial-like 12 2395617 2398344 + 116913864 MODEL JAAIVD010000007 pseudo 626062884 Scgb1c1 secretoglobin family 1C member 1 2 8640250 8641457 - 1915264 116890901 MODEL JAAIVD010000001;X60661;XM_032891522 CAA43068;XP_032747413 RYD5 potential ligand-binding protein protein-coding 626062891 LOC116903998 uncharacterized LOC116903998 6 108781930 108796483 - 116903998 MODEL JAAIVD010000024;XR_004388325 ncrna 626062895 Synj2bp synaptojanin 2 binding protein ENCODES a protein that exhibits type II activin receptor binding (ortholog); INVOLVED IN intracellular distribution of mitochondria (ortholog); negative regulation of activin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); FOUND IN cell surface (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 7 95691676 95725912 - 22301074 116905237 MODEL JAAIVD010000026;XM_032908062 XP_032763953 synaptojanin-2-binding protein protein-coding 626062903 LOC116894824 5S ribosomal RNA 2 43931139 43931257 + 116894824 MODEL JAAIVD010000001 pseudo 626062904 Dll4 delta like canonical Notch ligand 4 ENCODES a protein that exhibits Notch binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); aortic valve morphogenesis (ortholog); blood vessel lumenization (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 6 (ortholog) 5 97504934 97514351 + 22301074;30032202 116901808 MODEL JAAIVD010000023;XM_032903968 XP_032759859 delta-like protein 4 protein-coding 626062919 C2cd2 C2 calcium dependent domain containing 2 4 46622122 46681072 + 116898932 MODEL JAAIVD010000003;XM_032900349 XP_032756240 C2 domain-containing protein 2 protein-coding 626062937 Scn3b sodium voltage-gated channel beta subunit 3 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated sodium channel activity involved in cardiac muscle cell action potential (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); ASSOCIATED WITH brain edema (ortholog); Brugada syndrome (ortholog); Brugada syndrome 7 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); voltage-gated sodium channel complex (ortholog) 8 34870902 34892967 + 30032202 116906680 MODEL JAAIVD010000027;XM_032909469;XM_032909470;XM_032909471 XP_032765360;XP_032765361;XP_032765362 sodium channel subunit beta-3 protein-coding 626062951 Ube2e1 ubiquitin conjugating enzyme E2 E1 ENCODES a protein that exhibits ISG15 transferase activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN ISG15-protein conjugation (ortholog); negative regulation of gene expression (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); juvenile rheumatoid arthritis (ortholog); skin disease (ortholog); FOUND IN nucleus (ortholog); ubiquitin ligase complex (ortholog) 12 87322647 87371995 - 30032202 116914000 MODEL JAAIVD010000007;XM_032918272 XP_032774163 ubiquitin-conjugating enzyme E2 E1 protein-coding 626062961 LOC116884000 AT-hook DNA-binding motif-containing protein 1-like 14 32012393 32013536 - 116884000 MODEL JAAIVD010000009;XM_032885237 XP_032741128 protein-coding 626062966 Epm2aip1 EPM2A interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of glycogen biosynthetic process (ortholog); response to insulin (ortholog); ASSOCIATED WITH hereditary nonpolyposis colorectal cancer type 2 (ortholog); Lynch syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); nucleus (ortholog) 8 101835034 101842388 + 30032202 116907704 MODEL JAAIVD010000027;XM_032910826 XP_032766717 EPM2A-interacting protein 1 protein-coding 626062971 LOC116904278 immunoglobulin kappa variable 1-39-like 6 42027790 42028303 + 116904278 MODEL JAAIVD010000024 pseudo 626062972 LOC116900472 olfactory receptor 4C12-like 5 71468282 71469202 + 22301074 116900472 MODEL JAAIVD010000023;XM_032902207 XP_032758098 protein-coding 626062976 Atg9b autophagy related 9B INVOLVED IN autophagosome assembly (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog) 6 153577689 153585402 - 30032202 116904202 MODEL JAAIVD010000024;XM_032907117 XP_032763008 autophagy-related protein 9B protein-coding 626062993 LOC116884105 U2 spliceosomal RNA 14 2010754 2010910 + 116884105 MODEL JAAIVD010000009 pseudo 626062994 LOC116905871 serpin A11 7 115036683 115046084 - 30032202 116905871 MODEL JAAIVD010000026;XM_032908860 XP_032764751 protein-coding 626063003 Ubac1 UBA domain containing 1 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); proteasome binding (ortholog); INVOLVED IN protein maturation (ortholog); protein ubiquitination (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 5 11062329 11084981 + 22301074 116901280 MODEL JAAIVD010000023;XM_032903052;XM_032903053;XM_032903055 XP_032758943;XP_032758944;XP_032758946 ubiquitin-associated domain-containing protein 1 protein-coding 626063027 LOC116883516 histone H2B type 1-C/E/F/G/I-like 14 41863186 41875026 - 22301074;30032202 116883516 MODEL JAAIVD010000009;XM_032884688 XP_032740579 protein-coding 626063034 Erp27 endoplasmic reticulum protein 27 6 12508998 12526318 + 30032202 116904533 MODEL JAAIVD010000024;XM_032907325 XP_032763216 endoplasmic reticulum resident protein 27 protein-coding 626063045 Phc3 polyhomeotic homolog 3 PARTICIPATES IN histone modification pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); PcG protein complex (ortholog) 3 125133573 125199094 - 22301074;30032202 116896979 MODEL JAAIVD010000012;XM_032898563;XM_032898564;XM_032898565 XP_032754454;XP_032754455;XP_032754456 polyhomeotic-like protein 3 protein-coding 626063070 Heyl hes related family bHLH transcription factor with YRPW motif like ENCODES a protein that exhibits AF-1 domain binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN atrioventricular valve morphogenesis (ortholog); cardiac epithelial to mesenchymal transition (ortholog); cardiac ventricle morphogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Carotid Artery Injuries (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 35014738 35028837 - 22301074;30032202 116897030 MODEL JAAIVD010000025;XM_032898652 XP_032754543 hairy/enhancer-of-split related with YRPW motif-like protein protein-coding 626063079 LOC116912613 transcription factor BTF3-like 11 10199549 10201404 - 116912613 MODEL JAAIVD010000006 pseudo 626063080 LOC116906767 olfactory receptor 7C2-like 1 156826515 156827477 - 22301074;30032202 116906767 MODEL JAAIVD010000025;XM_032909613 XP_032765504 protein-coding 626063083 Bcdin3d BCDIN3 domain containing RNA methyltransferase ENCODES a protein that exhibits O-methyltransferase activity (ortholog); pre-miRNA binding (ortholog); RNA methyltransferase activity (ortholog); INVOLVED IN negative regulation of pre-miRNA processing (ortholog); pre-miRNA processing (ortholog); RNA methylation (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 272281774 272286070 - 30032202 116885155 MODEL JAAIVD010000025;XM_032886364 XP_032742255 RNA 5'-monophosphate methyltransferase protein-coding 626063089 LOC116884055 prolactin-7C1-like 14 46853707 46860757 - 22301074;30032202 116884055 MODEL JAAIVD010000009;XM_032885301;XM_032885302 XP_032741192;XP_032741193 protein-coding 626063099 LOC116903740 glyceraldehyde-3-phosphate dehydrogenase-like 6 84067526 84068594 + 116903740 MODEL JAAIVD010000024 pseudo 626063100 LOC116911937 cytochrome c oxidase assembly protein COX20, mitochondrial-like 11 13230427 13230613 + 116911937 MODEL JAAIVD010000006 pseudo 626063101 LOC116912089 lactoylglutathione lyase-like 11 67890601 67891214 + 22301074 116912089 MODEL JAAIVD010000006;XM_032915974 XP_032771865 protein-coding 626063105 LOC116903565 N-acetyltransferase family 8 member 2 6 60429628 60431969 + 30032202 116903565 MODEL JAAIVD010000024;XM_032906184 XP_032762075 protein-coding 626063111 Os9 OS9 endoplasmic reticulum lectin ENCODES a protein that exhibits glycosylation-dependent protein binding (ortholog); protease binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); protein retention in ER lumen (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); Hrd1p ubiquitin ligase complex (ortholog) 1 205522358 205551837 - 30032202 116909834 MODEL JAAIVD010000025;XM_032913556;XM_032913564 XP_032769447;XP_032769455 protein OS-9 protein-coding 626063131 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889662 MODEL JAAIVD010000045 trna 626063132 Cldn17 claudin 17 ENCODES a protein that exhibits channel activity (ortholog); paracellular tight junction channel activity (ortholog); INVOLVED IN paracellular transport (ortholog); FOUND IN plasma membrane (ortholog); tight junction (ortholog) 4 55344351 55347614 + 30032202 116899022 MODEL JAAIVD010000003;XM_032900470 XP_032756361 claudin-17 protein-coding 626063137 Ergic2 ERGIC and golgi 2 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 6 5815800 5847763 - 30032202 116903104 MODEL JAAIVD010000024;XM_032905428;XM_032905429 XP_032761319;XP_032761320 endoplasmic reticulum-Golgi intermediate compartment protein 2 protein-coding 626063158 Rdh14 retinol dehydrogenase 14 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); steroid dehydrogenase activity (ortholog); INVOLVED IN retinol metabolic process (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 7 30539071 30544095 + 116904871 MODEL JAAIVD010000026;XM_032907470 XP_032763361 protein-coding 626063164 LOC116889751 small nucleolar RNA SNORA17 116889751 MODEL JAAIVD010000079;XR_004386506 snorna 626063165 LOC116887629 olfactory receptor 11A1-like 18 10451687 10468062 - 116887629 MODEL JAAIVD010000013 pseudo 626063166 Acp2 acid phosphatase 2, lysosomal ENCODES a protein that exhibits acid phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN autophagic cell death (ortholog); lysosome organization (ortholog); response to cGMP (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Acid Phosphatase Deficiency (ortholog); FOUND IN lysosome (ortholog) 5 65366595 65376348 + 30032202 116901614 MODEL JAAIVD010000023;XM_032903658 XP_032759549 lysosomal acid phosphatase protein-coding 626063182 LOC116897755 transmembrane epididymal protein 1A-like 4 5744623 5745537 + 116897755 MODEL JAAIVD010000003;XM_032899187 XP_032755078 protein-coding 626063185 LOC116893700 olfactory receptor 5B3-like 2 13160988 13161914 - 22301074;30032202 116893700 MODEL JAAIVD010000001;XM_032895417 XP_032751308 protein-coding 626063189 LOC116884737 actin, cytoplasmic type 8-like 15 12705210 12706082 + 116884737 MODEL JAAIVD010000010 pseudo 626063190 LOC116894681 uncharacterized LOC116894681 2 210532501 210537717 + 116894681 MODEL JAAIVD010000001;XR_004387037 ncrna 626063194 Vsig1 V-set and immunoglobulin domain containing 1 INVOLVED IN epithelial cell morphogenesis (ortholog); maintenance of gastrointestinal epithelium (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) X 93323824 93357690 + 30032202 116889234 MODEL JAAIVD010000014;XM_032890385 XP_032746276 V-set and immunoglobulin domain-containing protein 1 protein-coding 626063206 Dipk1a divergent protein kinase domain 1A ASSOCIATED WITH Diamond-Blackfan anemia (ortholog) 11 17709923 17781708 - 116912081 MODEL JAAIVD010000006;XM_032915960 XP_032771851 protein-coding 626063215 Pcdh1 protocadherin 1 ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cell junction (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 15 6719737 6733596 + 22301074 116884276 MODEL JAAIVD010000010;XM_032885359 XP_032741250 protocadherin-1 protein-coding 626063222 St8sia2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN ganglioside biosynthetic process (ortholog); N-glycan processing (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); extracellular region (ortholog) 2 126483780 126556680 + 22301074;30032202 116891966 MODEL JAAIVD010000001;XM_032893409;XM_032893410 XP_032749300;XP_032749301 alpha-2,8-sialyltransferase 8B protein-coding 626063233 Dmap1 DNA methyltransferase 1 associated protein 1 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of protein import into nucleus (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH epilepsy (ortholog); Muscle Hypotonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NuA4 histone acetyltransferase complex (ortholog) 1 41283468 41291463 - 22301074;30032202 116898720 MODEL JAAIVD010000025;XM_032900019;XM_032900027 XP_032755910;XP_032755918 DNA methyltransferase 1-associated protein 1 protein-coding 626063252 Sap18 Sin3A associated protein 18 INVOLVED IN negative regulation of mRNA splicing, via spliceosome (ortholog); positive regulation of apoptotic process (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN Hedgehog signaling pathway; FOUND IN ASAP complex (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) 12 67027757 67032199 - 22301074;30032202 116913635 MODEL JAAIVD010000007;XM_032917906 XP_032773797 histone deacetylase complex subunit SAP18 protein-coding 626063260 Sh3bgrl2 SH3 domain binding glutamate rich protein like 2 ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) 8 77686012 77738024 + 30032202 116906716 MODEL JAAIVD010000027;XM_032909523 XP_032765414 SH3 domain-binding glutamic acid-rich-like protein 2 protein-coding 626063268 LOC116909423 40S ribosomal protein S8-like 1 160274875 160280776 + 116909423 MODEL JAAIVD010000025 pseudo 626063269 Commd7 COMM domain containing 7 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of NF-kappaB transcription factor activity (ortholog); tumor necrosis factor-mediated signaling pathway (ortholog) 5 132944607 132959467 - 30032202 116902146 MODEL JAAIVD010000023;XM_032904478;XM_032904479;XM_032904480 XP_032760369;XP_032760370;XP_032760371 COMM domain-containing protein 7 protein-coding 626063290 LOC116907914 RNA polymerase-associated protein LEO1-like 8 69757670 69771194 + 22301074;30032202 116907914 MODEL JAAIVD010000027;XM_032911114 XP_032767005 protein-coding 626063304 LOC116905077 high mobility group protein B1-like 7 72292077 72292720 + 116905077 MODEL JAAIVD010000026 pseudo 626063305 LOC116893200 vomeronasal type-2 receptor 116-like 2 106591694 106669292 + 116893200 MODEL JAAIVD010000001 pseudo 626063306 Tssk1b testis specific serine kinase 1B ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); spermatid development (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); FOUND IN motile cilium (ortholog) 4 3159642 3161268 + 22301074;30032202 116898656 MODEL JAAIVD010000003;XM_032899890 XP_032755781 testis-specific serine/threonine-protein kinase 1 protein-coding 626063311 LOC116895033 U1 spliceosomal RNA 2 145886766 145886928 + 116895033 MODEL JAAIVD010000001;XR_004387219 snrna 626063314 LOC116910330 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11-like 9 60940273 60942250 - 116910330 MODEL JAAIVD010000002 pseudo 626063315 Ptpru protein tyrosine phosphatase receptor type U ENCODES a protein that exhibits beta-catenin binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); homotypic cell-cell adhesion (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN cell-cell junction (ortholog) 1 26416223 26490319 + 22301074 116895760 MODEL JAAIVD010000025;XM_032896923 XP_032752814 receptor-type tyrosine-protein phosphatase U protein-coding 626063351 LOC116913166 60S ribosomal protein L13a-like 12 49925046 49925629 - 116913166 MODEL JAAIVD010000007 pseudo 626063352 LOC116906486 U6atac minor spliceosomal RNA 7 41222996 41223121 + 116906486 MODEL JAAIVD010000026;XR_004388729 snrna 626063355 Acss1 acyl-CoA synthetase short chain family member 1 ENCODES a protein that exhibits acetate-CoA ligase activity (ortholog); propionate-CoA ligase activity (ortholog); INVOLVED IN acetate biosynthetic process (ortholog); acetyl-CoA biosynthetic process (ortholog); propionate biosynthetic process (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; fatty acid beta degradation pathway; malonic aciduria pathway; ASSOCIATED WITH Experimental Melanoma (ortholog); Hypothermia (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 130337722 130387353 - 22301074;30032202 116902096 MODEL JAAIVD010000023;XM_032904396 XP_032760287 acetyl-coenzyme A synthetase 2-like, mitochondrial protein-coding 626063373 Abhd17b abhydrolase domain containing 17B, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynaptic density (ortholog) 2 21747614 21782376 + 30032202 116891030 MODEL JAAIVD010000001;XM_032891712;XM_032891713 XP_032747603;XP_032747604 alpha/beta hydrolase domain-containing protein 17B protein-coding 626063386 LOC116889363 protein S-Myc X 760678 761970 - 22301074;30032202 116889363 MODEL JAAIVD010000014;XM_032890470 XP_032746361 protein-coding 626063389 LOC116894067 olfactory receptor 51A7-like 2 102903467 102904410 + 22301074 116894067 MODEL JAAIVD010000001;XM_032895790 XP_032751681 protein-coding 626063393 LOC116896435 60S ribosomal protein L35a-like 3 53992906 53993293 + 22301074;30032202 116896435 MODEL JAAIVD010000012;XM_032897586 XP_032753477 protein-coding 626063397 LOC116898135 60S ribosomal protein L31-like 4 112244137 112244569 + 22301074;30032202 116898135 MODEL JAAIVD010000003;XM_032899510 XP_032755401 protein-coding 626063402 Mrto4 MRT4 homolog, ribosome maturation factor 1 18833889 18839447 + 22301074;30032202 116893666 MODEL JAAIVD010000025;XM_032895385;XM_032895392 XP_032751276;XP_032751283 mRNA turnover protein 4 homolog protein-coding 626063417 Abcb5 ATP binding cassette subfamily B member 5 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); INVOLVED IN eye development (ortholog); regulation of membrane potential (ortholog); transmembrane transport (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); melanoma (ortholog); FOUND IN plasma membrane (ortholog) 7 117164272 117255546 + 22301074 116905882 MODEL JAAIVD010000026;XM_032908872 XP_032764763 ATP-binding cassette sub-family B member 5 protein-coding 626063447 LOC116907147 60S ribosomal protein L15-like 8 60912883 60913540 + 116907147 MODEL JAAIVD010000027 pseudo 626063448 LOC116889272 protein Jade-3-like X 1294394 1304714 - 30032202 116889272 MODEL JAAIVD010000014;XM_032890415 XP_032746306 protein-coding 626063455 Pola2 DNA polymerase alpha 2, accessory subunit ENCODES a protein that exhibits DNA-directed DNA polymerase activity (ortholog); INVOLVED IN DNA replication (ortholog); DNA replication initiation (ortholog); DNA replication, synthesis of primer (ortholog); FOUND IN alpha DNA polymerase:primase complex (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 2 1733024 1757234 + 22301074;30032202 116890688 MODEL JAAIVD010000001;XM_032891101 XP_032746992 DNA polymerase alpha subunit B protein-coding 626063477 Rapgefl1 Rap guanine nucleotide exchange factor like 1 ASSOCIATED WITH familial cold autoinflammatory syndrome 2 (ortholog); prostate cancer (ortholog) 9 55587311 55602416 - 22301074;30032202 116909573 MODEL JAAIVD010000002;XM_032913192;XM_032913193;XM_032913194 XP_032769083;XP_032769084;XP_032769085 rap guanine nucleotide exchange factor-like 1 protein-coding 626063503 LOC116894107 putative olfactory receptor 52P1 2 103568593 103569519 - 22301074 116894107 MODEL JAAIVD010000001;XM_032895826 XP_032751717 protein-coding 626063506 LOC116896476 NADPH-dependent 3-keto-steroid reductase Hsd3b5-like 3 58542553 58900596 + 22301074 116896476 MODEL JAAIVD010000012;XM_032897641 XP_032753532 protein-coding 626063510 Kcna2 potassium voltage-gated channel subfamily A member 2 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); kinesin binding (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); axon terminus (ortholog) 3 51149324 51156034 - 22301074;30032202 116896394 MODEL JAAIVD010000012;X16003;XM_032897525;XM_032897527;XM_032897528;XM_032897529;XM_032897530;XM_032897531 CAA34134;XP_032753416;XP_032753418;XP_032753419;XP_032753420;XP_032753421;XP_032753422 protein-coding 626063530 Spata19 spermatogenesis associated 19 INVOLVED IN sperm mitochondrion organization (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); sperm flagellum (ortholog) 8 23293287 23297536 + 116906534 MODEL JAAIVD010000027;XM_032909230 XP_032765121 spermatogenesis-associated protein 19, mitochondrial protein-coding 626063538 Trex2 three prime repair exonuclease 2 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); DNA binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN DNA metabolic process (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); intellectual disability (ortholog) X 129056510 129058093 - 22301074;30032202 116889357 MODEL JAAIVD010000014;XM_032890466 XP_032746357 protein-coding 626063544 Calcoco1 calcium binding and coiled-coil domain 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN nuclear receptor-mediated steroid hormone signaling pathway (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN estrogen signaling pathway; FOUND IN chromatin (ortholog); cytosol (ortholog); nucleus (ortholog) 1 260366021 260381132 + 116883305 MODEL JAAIVD010000025;XM_032884356 XP_032740247 calcium-binding and coiled-coil domain-containing protein 1 protein-coding 626063563 LOC116886336 60S ribosomal protein L26-like 17 2836701 2837146 - 116886336 MODEL JAAIVD010000011 pseudo 626063564 LOC116897530 small nucleolar RNA SNORA48 3 106736491 106736634 + 116897530 MODEL JAAIVD010000012;XR_004387545 snorna 626063567 Ubap2 ubiquitin associated protein 2 1 4280461 4368724 + 22301074;30032202 116891418 MODEL JAAIVD010000025;XM_032892448;XM_032892458;XM_032892465 XP_032748339;XP_032748349;XP_032748356 ubiquitin-associated protein 2 protein-coding 626063604 Scn1b sodium voltage-gated channel beta subunit 1 ENCODES a protein that exhibits sodium channel inhibitor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN axon guidance (ortholog); cardiac conduction (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy 3 (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Brugada syndrome (ortholog); FOUND IN intercalated disc (ortholog); node of Ranvier (ortholog); plasma membrane (ortholog) 2 164901091 164910943 + 30032202 116892288 MODEL JAAIVD010000001;XM_032893887;XM_032893888 XP_032749778;XP_032749779 sodium channel subunit beta-1 protein-coding 626063618 Zcchc7 zinc finger CCHC-type containing 7 FOUND IN cytosol (ortholog); nucleolus (ortholog) 1 1584109 1769243 - 22301074 116890853 MODEL JAAIVD010000025;XM_032891420 XP_032747311 zinc finger CCHC domain-containing protein 7 protein-coding 626063631 Uri1 URI1 prefoldin like chaperone ENCODES a protein that exhibits chromatin binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); cellular response to steroid hormone stimulus (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH carcinoma (ortholog); Experimental Neoplasms (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 160626204 160683303 + 30032202 116892254 MODEL JAAIVD010000001;XM_032893835;XM_032893836 XP_032749726;XP_032749727 unconventional prefoldin RPB5 interactor 1 protein-coding 626063649 LOC116899227 60S ribosomal protein L35 4 90606364 90606805 - 22301074;30032202 116899227 MODEL JAAIVD010000003;XM_032900828 XP_032756719 protein-coding 626063654 Snapc3 small nuclear RNA activating complex polypeptide 3 PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nuclear body (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 70320340 70347870 - 30032202 116900628 MODEL JAAIVD010000025;XM_032902346 XP_032758237 snRNA-activating protein complex subunit 3 protein-coding 626063667 LOC116885720 ubiquitin-conjugating enzyme E2 variant 1-like 16 44424964 44426206 - 116885720 MODEL JAAIVD010000004 pseudo 626063668 LOC116888714 L-lactate dehydrogenase B chain-like X 72476876 72477823 + 116888714 MODEL JAAIVD010000014 pseudo 626063669 Znf598 zinc finger protein 598, E3 ubiquitin ligase ENCODES a protein that exhibits protein-RNA adaptor activity (ortholog); ribosome binding (ortholog); stalled ribosome sensor activity (ortholog); INVOLVED IN negative regulation of translational initiation (ortholog); protein K63-linked ubiquitination (ortholog); protein monoubiquitination (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog) 9 1951951 1964024 + 30032202 116909391 MODEL JAAIVD010000002;XM_032912952;XM_032912953 XP_032768843;XP_032768844 E3 ubiquitin-protein ligase ZNF598 protein-coding 626063686 LOC116909526 olfactory receptor 2T29-like 9 39603545 39604507 + 22301074 116909526 MODEL JAAIVD010000002;XM_032913134 XP_032769025 protein-coding 626063689 Sytl5 synaptotagmin like 5 INVOLVED IN exocytosis (ortholog); ASSOCIATED WITH Laterality Defects, Autosomal Dominant (ortholog) X 11290937 11384520 - 22301074;30032202 116888743 MODEL JAAIVD010000014;XM_032890037;XM_032890038 XP_032745928;XP_032745929 synaptotagmin-like protein 5 protein-coding 626063712 Cad carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase ENCODES a protein that exhibits aspartate carbamoyltransferase activity (ortholog); carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity (ortholog); dihydroorotase activity (ortholog); INVOLVED IN 'de novo' pyrimidine nucleobase biosynthetic process (ortholog); 'de novo' UMP biosynthetic process (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; beta-ureidopropionase deficiency pathway; Canavan disease pathway; ASSOCIATED WITH beta thalassemia (ortholog); Colonic Neoplasms (ortholog); congenital hypoplastic anemia (ortholog); FOUND IN cell projection (ortholog); cytosol (ortholog); neuronal cell body (ortholog) 7 23000574 23023619 - 22301074;30032202 116905988 MODEL AB007768;JAAIVD010000026;XM_032909018 BAA22615;XP_032764909 CAD protein;dihydroorotase protein-coding 626063759 LOC116894199 olfactory receptor 484 2 106249404 106250375 - 22301074;30032202 116894199 MODEL JAAIVD010000001;XM_032895912 XP_032751803 protein-coding 626063762 Rraga Ras related GTP binding A ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); phosphoprotein binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasm (ortholog); FNIP-folliculin RagC/D GAP (ortholog); GATOR1 complex (ortholog) 1 67412997 67414612 - 22301074;30032202 116900526 MODEL JAAIVD010000025;XM_032902256 XP_032758147 ras-related GTP-binding protein A protein-coding 626063767 LOC116911390 putative dimethylaniline monooxygenase [N-oxide-forming] 6 10 42189001 42215109 - 22301074;30032202 116911390 MODEL JAAIVD010000005;XM_032915343 XP_032771234 protein-coding 626063777 LOC116883378 60S ribosomal protein L37-like 14 43947985 43948285 - 116883378 MODEL JAAIVD010000009 pseudo 626063778 Hivep2 HIVEP zinc finger 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 13 (ortholog); autosomal dominant intellectual developmental disorder 43 (ortholog); FOUND IN nucleoplasm (ortholog) 2 223032374 223229948 - 1901405;30032202 116893005 MODEL JAAIVD010000001;X54249;XM_032894967 CAA38150;XP_032750858 transcription factor HIVEP2;zinc finger protein AT-BP1 protein-coding 626063792 Gusb glucuronidase beta ENCODES a protein that exhibits beta-glucuronidase activity (ortholog); carbohydrate binding (ortholog); hydrolase activity (ortholog); INVOLVED IN aorta development (ortholog); articular cartilage development (ortholog); autophagy (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; congenital sucrase-isomaltase deficiency pathway; erythropoietic porphyria pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); lysosomal lumen (ortholog) 16 24013587 24026601 + 22301074;30032202 116885144 MODEL JAAIVD010000004;XM_032886333;XM_032886334 XP_032742224;XP_032742225 beta-glucuronidase protein-coding 626063810 St7 suppression of tumorigenicity 7 6 121029890 121263733 - 116904057 MODEL JAAIVD010000024;XM_032906915;XM_032906916;XM_032906917;XM_032906918 XP_032762806;XP_032762807;XP_032762808;XP_032762809 suppressor of tumorigenicity 7 protein protein-coding 626063842 Mettl8 methyltransferase 8, tRNA N3-cytidine ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); mRNA methyltransferase activity (ortholog); tRNA (cytidine-3-)-methyltransferase activity (ortholog); INVOLVED IN fat cell differentiation (ortholog); mitochondrial tRNA modification (ortholog); mRNA metabolic process (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 5 48257555 48347668 - 30032202 116900833 MODEL JAAIVD010000023;XM_032902535 XP_032758426 mRNA N(3)-methylcytidine methyltransferase METTL8;methyltransferase 8, methylcytidine;methyltransferase like 8 protein-coding 626063855 LOC116901063 zinc finger protein 431-like 5 142439008 142441107 + 22301074 116901063 MODEL JAAIVD010000023;XM_032902637 XP_032758528 protein-coding 626063861 LOC116894191 olfactory receptor 480-like 2 106100789 106101816 - 22301074;30032202 116894191 MODEL JAAIVD010000001;XM_032895905 XP_032751796 protein-coding 626063864 LOC116883415 histone H2B type 1-A 14 42942240 42942852 - 22301074;30032202 116883415 MODEL JAAIVD010000009;XM_032884543 XP_032740434 protein-coding 626063869 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92633406 92633477 + 116904861 MODEL JAAIVD010000024 trna 626063870 Plin4 perilipin 4 ASSOCIATED WITH Vacuolar Neuromyopathy (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog); plasma membrane (ortholog) 4 87491730 87498474 - 30032202 116898059 MODEL JAAIVD010000003;XM_032899455 XP_032755346 perilipin-4 protein-coding 626063881 LOC116900743 zinc finger protein 239-like 5 142718608 142721162 - 116900743 MODEL JAAIVD010000023;XM_032902447 XP_032758338 protein-coding 626063887 Chd1l chromodomain helicase DNA binding protein 1 like ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); histone reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH CAKUT (ortholog); Dwarfism (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 3 59709298 59764050 + 22301074;30032202 116896488 MODEL JAAIVD010000012;XM_032897658 XP_032753549 chromodomain-helicase-DNA-binding protein 1-like protein-coding 626063914 LOC116904452 proliferation-associated protein 2G4-like 6 128297383 128298319 + 116904452 MODEL JAAIVD010000024 pseudo 626063915 Srsf12 serine and arginine rich splicing factor 12 INVOLVED IN mRNA 5'-splice site recognition (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway 1 109805095 109829564 - 22301074 116902324 MODEL JAAIVD010000025;XM_032904779;XM_032904789 XP_032760670;XP_032760680 serine/arginine-rich splicing factor 12 protein-coding 626063926 Vwa7 von Willebrand factor A domain containing 7 18 7616463 7625314 + 116887186 MODEL JAAIVD010000013;XM_032888741 XP_032744632 von Willebrand factor A domain-containing protein 7 protein-coding 626063947 LOC116894984 small nucleolar RNA SNORA9 2 99028308 99028445 + 116894984 MODEL JAAIVD010000001;XR_004387175 snorna 626063950 Eno2 enolase 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); multicellular organismal reproductive process (ortholog); PARTICIPATES IN gluconeogenesis pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Atrophy (ortholog); brain disease (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 6 23115150 23124046 + 22301074;30032202 116903278 MODEL JAAIVD010000024;XM_032905697;XM_032905698 XP_032761588;XP_032761589 gamma-enolase protein-coding 626063969 Slc30a3 solute carrier family 30 member 3 ENCODES a protein that exhibits zinc ion transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of transport (ortholog); zinc ion import into lysosome (ortholog); zinc ion import into synaptic vesicle (ortholog); ASSOCIATED WITH Febrile Seizures (ortholog); Zinc Deficiency (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); hippocampal mossy fiber (ortholog) 7 22984963 22993301 + 30032202 116905985 MODEL JAAIVD010000026;XM_032909008;XM_032909010 XP_032764899;XP_032764901 zinc transporter 3 protein-coding 626063984 LOC116895001 small nucleolar RNA SNORA54 2 6168029 6168155 + 116895001 MODEL JAAIVD010000001;XR_004387189 snorna 626063987 Wdr87 WD repeat domain 87 2 166404950 166421135 - 22301074 116893375 MODEL JAAIVD010000001;XM_032895175 XP_032751066 WD repeat-containing protein 87 protein-coding 626063997 Ints14 integrator complex subunit 14 INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA processing (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 8 59265137 59288942 + 30032202 116908150 MODEL JAAIVD010000027;XM_032911451;XM_032911452;XM_032911453 XP_032767342;XP_032767343;XP_032767344 protein-coding 626064021 LOC116900982 immunoglobulin kappa variable 4-1-like 5 109063725 109064325 + 116900982 MODEL JAAIVD010000023 pseudo 626064022 LOC116894108 putative olfactory receptor 52P1 2 103586591 103587573 + 22301074 116894108 MODEL JAAIVD010000001;XM_032895827 XP_032751718 protein-coding 626064026 Asb7 ankyrin repeat and SOCS box containing 7 2 133678639 133723111 + 22301074 116891991 MODEL JAAIVD010000001;XM_032893442;XM_032893443;XM_032893444 XP_032749333;XP_032749334;XP_032749335 ankyrin repeat and SOCS box protein 7 protein-coding 626064041 LOC116904625 olfactory receptor 6C4-like 6 30138285 30139268 - 22301074;30032202 116904625 MODEL JAAIVD010000024;XM_032907416 XP_032763307 protein-coding 626064044 Rnf186 ring finger protein 186 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN apoptotic process in response to mitochondrial fragmentation (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 19230358 19231700 - 30032202 116893800 MODEL JAAIVD010000025;XM_032895507 XP_032751398 E3 ubiquitin-protein ligase RNF186 protein-coding 626064049 Nrbf2 nuclear receptor binding factor 2 ENCODES a protein that exhibits nuclear receptor binding (ortholog); INVOLVED IN autophagy (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of lipid kinase activity (ortholog); FOUND IN cytoplasm (ortholog); phosphatidylinositol 3-kinase complex, class III (ortholog) 18 19543384 19560913 + 22301074;30032202 116887194 MODEL JAAIVD010000013;XM_032888750;XM_032888751 XP_032744641;XP_032744642 nuclear receptor-binding factor 2 protein-coding 626064059 Rgs4 regulator of G protein signaling 4 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN dorsal root ganglion development (ortholog); negative regulation of cell growth involved in cardiac muscle cell development (ortholog); negative regulation of dopamine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; calcium signaling pathway via the calcium-sensing receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH alcohol dependence (ortholog); bladder disease (ortholog); Drug-Induced Dyskinesia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 10 48935024 48941287 - 116911224 MODEL JAAIVD010000005;XM_032915122 XP_032771013 regulator of G-protein signaling 4 protein-coding 626064068 Cd274 CD274 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response (ortholog); negative regulation of activated T cell proliferation (ortholog); ASSOCIATED WITH acute myocarditis (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell surface (ortholog); early endosome membrane (ortholog) 2 29452186 29466469 + 30032202 116893764 MODEL JAAIVD010000001;XM_032895466 XP_032751357 programmed cell death 1 ligand 1 protein-coding 626064078 LOC116898166 glyceraldehyde-3-phosphate dehydrogenase-like 4 123092976 123093959 + 116898166 MODEL JAAIVD010000003 pseudo 626064079 LOC116894291 cytochrome c, somatic-like 1 72602934 72603245 + 22301074;30032202 116894291 MODEL JAAIVD010000025;XM_032896018 XP_032751909 protein-coding 626064082 LOC116903129 26S proteasome regulatory subunit 6B-like 6 7838806 7839927 - 22301074;30032202 116903129 MODEL JAAIVD010000024;XM_032905483;XM_032905484 XP_032761374;XP_032761375 protein-coding 626064088 Lbx2 ladybird homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 6 63136901 63138743 - 22301074 116902781 MODEL JAAIVD010000024;XM_032905123 XP_032761014 transcription factor LBX2 protein-coding 626064094 Hexd hexosaminidase D ENCODES a protein that exhibits beta-N-acetylhexosaminidase activity (ortholog); hexosaminidase activity (ortholog); FOUND IN cytoplasm (ortholog); extracellular vesicle (ortholog); nucleus (ortholog) 9 62802169 62819328 - 22301074;30032202 116909858 MODEL JAAIVD010000002;XM_032913585 XP_032769476 protein-coding 626064110 Tomm6 translocase of outer mitochondrial membrane 6 PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) 4 82188128 82189692 + 22301074;30032202 116899077 MODEL JAAIVD010000003;XM_032900573 XP_032756464 mitochondrial import receptor subunit TOM6 homolog protein-coding 626064117 LOC116896065 heat shock protein HSP 90-beta-like 3 207748426 207759000 + 116896065 MODEL JAAIVD010000012 pseudo 626064118 Lyve1 lymphatic vessel endothelial hyaluronan receptor 1 ENCODES a protein that exhibits cargo receptor activity (ortholog); hyaluronic acid binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN glycosaminoglycan catabolic process (ortholog); hyaluronan catabolic process (ortholog); positive regulation of cellular extravasation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) 2 90590063 90602900 + 22301074;30032202 116891657 MODEL JAAIVD010000001;XM_032892904 XP_032748795 lymphatic vessel endothelial hyaluronic acid receptor 1 protein-coding 626064128 LOC116887725 small nucleolar RNA SNORA17 18 14458548 14458677 - 116887725 MODEL JAAIVD010000013;XR_004386239 snorna 626064131 LOC116897405 U6 spliceosomal RNA 3 169022873 169022979 - 116897405 MODEL JAAIVD010000012;XR_004387448 snrna 626064134 Matn4 matrilin 4 INVOLVED IN response to axon injury (ortholog); ASSOCIATED WITH holoprosencephaly (ortholog); Prostatic Neoplasms (ortholog); FOUND IN matrilin complex (ortholog) 5 153562877 153575047 + 22301074 116902364 MODEL JAAIVD010000023;XM_032904858 XP_032760749 matrilin-4 protein-coding 626064148 LOC116899909 small nucleolar RNA SNORA79 4 17056061 17056203 - 116899909 MODEL JAAIVD010000003;XR_004387881 snorna 626064151 LOC116911730 olfactory receptor 6N2 10 52760974 52761927 + 22301074 116911730 MODEL JAAIVD010000005;XM_032915711 XP_032771602 protein-coding 626064154 LOC116889324 integrator complex subunit 6-like X 116671710 116677513 + 30032202 116889324 MODEL JAAIVD010000014;XM_032890446 XP_032746337 protein-coding 626064161 LOC116894485 CD177 antigen-like 2 169980425 169984965 + 30032202 116894485 MODEL JAAIVD010000001;XM_032896195 XP_032752086 protein-coding 626064170 Klhl34 kelch like family member 34 X 36689428 36694876 - 22301074 116889338 MODEL JAAIVD010000014;XM_032890455 XP_032746346 kelch-like protein 34 protein-coding 626064175 Pigc phosphatidylinositol glycan anchor biosynthesis class C INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH glycosylphosphatidylinositol biosynthesis defect 16 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) 10 41269541 41272034 + 22301074;30032202 116911447 MODEL JAAIVD010000005;XM_032915414;XM_032915415;XM_032915416 XP_032771305;XP_032771306;XP_032771307 phosphatidylinositol N-acetylglucosaminyltransferase subunit C protein-coding 626064186 LOC116888712 RWD domain-containing protein 4-like X 113294884 113295445 - 116888712 MODEL JAAIVD010000014 pseudo 626064187 LOC116884502 ubiquitin-40S ribosomal protein S27a-like 15 40941985 40942450 - 116884502 MODEL JAAIVD010000010 pseudo 626064188 Ndufaf3 NADH:ubiquinone oxidoreductase complex assembly factor 3 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); mitochondrial complex I deficiency (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) 8 99895222 99897265 - 22301074;30032202 116907602 MODEL JAAIVD010000027;XM_032910652;XM_032910653 XP_032766543;XP_032766544 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 protein-coding 626064201 LOC116912658 40S ribosomal protein S19-like 11 7032500 7033059 - 116912658 MODEL JAAIVD010000006 pseudo 626064202 LOC116900403 olfactory receptor 4C11-like 5 70077693 70078604 + 22301074 116900403 MODEL JAAIVD010000023;XM_032902148 XP_032758039 protein-coding 626064205 Prr12 proline rich 12 ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 2 154492681 154517362 + 116892174 MODEL JAAIVD010000001;XM_032893683 XP_032749574 proline-rich protein 12 protein-coding 626064223 Ngf nerve growth factor ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); death receptor agonist activity (ortholog); metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cell population proliferation (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular space (ortholog) 3 55574695 55627455 - 30032202 116896456 MODEL JAAIVD010000012;XM_032897614;XM_032897615 XP_032753505;XP_032753506 beta-nerve growth factor protein-coding 626064233 LOC116885990 U6 spliceosomal RNA 16 15243756 15243856 + 116885990 MODEL JAAIVD010000004 pseudo 626064234 Sbf2 SET binding factor 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 4 (ortholog); Charcot-Marie-Tooth disease type 4B2 (ortholog); FOUND IN membrane (ortholog); vacuolar membrane (ortholog) 2 90836306 91147464 + 116891661 MODEL JAAIVD010000001;XM_032892912 XP_032748803 myotubularin-related protein 13 protein-coding 626064279 Kcnj15 potassium inwardly rectifying channel subfamily J member 15 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); Lung Neoplasms (ortholog) 4 49338583 49380480 - 22301074;30032202 116898958 MODEL JAAIVD010000003;XM_032900375;XM_032900376 XP_032756266;XP_032756267 ATP-sensitive inward rectifier potassium channel 15 protein-coding 626064289 Foxd1 forkhead box D1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon guidance (ortholog); branching involved in ureteric bud morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 3 198251241 198253455 - 30032202 116895676 MODEL JAAIVD010000012;XM_032896880 XP_032752771 forkhead box protein D1 protein-coding 626064294 LOC116885415 10 kDa heat shock protein, mitochondrial-like 1 58908925 58909297 - 116885415 MODEL JAAIVD010000025 pseudo 626064295 Adam12 ADAM metallopeptidase domain 12 ENCODES a protein that exhibits SH3 domain binding (ortholog); INVOLVED IN positive regulation of angiogenesis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH osteoarthritis (ortholog); ureteral obstruction (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 2 67801189 67991232 + 22301074 116893109 MODEL JAAIVD010000001;XM_032895048 XP_032750939 disintegrin and metalloproteinase domain-containing protein 12 protein-coding 626064321 LOC116886585 macrophage migration inhibitory factor-like 1 20006717 20007254 + 30032202 116886585 MODEL JAAIVD010000025;XM_032888112 XP_032744003 protein-coding 626064326 Ldb3 LIM domain binding 3 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); enzyme binding (ortholog); muscle alpha-actinin binding (ortholog); INVOLVED IN sarcomere organization (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); congenital myopathy (ortholog); FOUND IN cytoskeleton (ortholog); Z disc (ortholog) 13 10301601 10364289 - 30032202 116914686 MODEL JAAIVD010000008;XM_032919104;XM_032919105;XM_032919106;XM_032919107 XP_032774995;XP_032774996;XP_032774997;XP_032774998 LIM domain-binding protein 3 protein-coding 626064353 LOC116898344 60S ribosomal protein L37a-like 4 48561130 48561403 + 116898344 MODEL JAAIVD010000003 pseudo 626064354 LOC116897549 small nucleolar RNA SNORA17 3 26128699 26128829 + 116897549 MODEL JAAIVD010000012;XR_004387563 snorna 626064357 LOC116906958 heat shock protein HSP 90-alpha-like 8 83351448 83355974 + 116906958 MODEL JAAIVD010000027 pseudo 626064358 Tmem184c transmembrane protein 184C 1 146367810 146382862 - 30032202 116905022 MODEL JAAIVD010000025;XM_032907739 XP_032763630 protein-coding 626064371 LOC116906887 olfactory receptor 151-like 8 72749746 72750674 - 22301074;30032202 116906887 MODEL JAAIVD010000027;XM_032909800 XP_032765691 protein-coding 626064374 LOC116889836 uncharacterized LOC116889836 116889836 MODEL JAAIVD010001614;XM_032890671 XP_032746562 uncharacterized protein LOC116889836 protein-coding 626064375 LOC116883924 actin, cytoplasmic 2-like 14 6219769 6223967 + 116883924 MODEL JAAIVD010000009 pseudo 626064376 Smc3 structural maintenance of chromosomes 3 ENCODES a protein that exhibits beta-tubulin binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitotic spindle assembly (ortholog); regulation of DNA replication (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cornelia de Lange syndrome (ortholog); Cornelia de Lange syndrome 1 (ortholog); FOUND IN basement membrane (ortholog); chromatin (ortholog); cohesin complex (ortholog) 2 53025829 53068102 + 22301074;30032202 116891287 MODEL JAAIVD010000001;XM_032892191 XP_032748082 structural maintenance of chromosomes protein 3 protein-coding 626064409 LOC116889676 30S ribosomal protein S2-like 22301074;30032202 116889676 MODEL JAAIVD010000048;XM_032890566 XP_032746457 protein-coding 626064410 Spdef SAM pointed domain containing ETS transcription factor ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN epithelial cell fate commitment (ortholog); glandular epithelial cell development (ortholog); intestinal epithelial cell development (ortholog); ASSOCIATED WITH ovarian cancer (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleus (ortholog) 18 6134222 6140063 + 22301074;30032202 116886869 MODEL JAAIVD010000013;XM_032888328 XP_032744219 SAM pointed domain-containing Ets transcription factor protein-coding 626064419 LOC116889055 ATP synthase F(0) complex subunit C2, mitochondrial-like X 22126263 22126811 + 116889055 MODEL JAAIVD010000014 pseudo 626064420 Tex36 testis expressed 36 2 68277346 68291672 + 116893877 MODEL JAAIVD010000001;XM_032895600 XP_032751491 testis-expressed protein 36 protein-coding 626064428 LOC116895499 histone H3.3A-like 3 107405636 107406010 - 22301074;30032202 116895499 MODEL JAAIVD010000012;XM_032896753 XP_032752644 protein-coding 626064431 Fbxo43 F-box protein 43 INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); negative regulation of cell cycle process (ortholog); negative regulation of meiotic nuclear division (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 12 (ortholog); spermatogenic failure 64 (ortholog); FOUND IN female germ cell nucleus (ortholog) 1 209682751 209696404 - 22301074;30032202 116890053 MODEL JAAIVD010000025;XM_032890820;XM_032890821;XM_032890822 XP_032746711;XP_032746712;XP_032746713 F-box only protein 43 protein-coding 626064447 LOC116884784 glycerol kinase-like 15 79046543 79048192 - 22301074;30032202 116884784 MODEL JAAIVD010000010;XM_032886017 XP_032741908 protein-coding 626064450 Lox lysyl oxidase ENCODES a protein that exhibits collagen binding (ortholog); copper ion binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN aorta development (ortholog); ascending aorta development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aortic aneurysm (ortholog); aortic valve insufficiency (ortholog); FOUND IN collagen trimer (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 15 79200553 79213726 + 22301074;30032202 116884780 MODEL JAAIVD010000010;XM_032886009;XM_032886010 XP_032741900;XP_032741901 protein-lysine 6-oxidase protein-coding 626064464 Cd70 CD70 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN adaptive immune memory response involving T cells and B cells (ortholog); B cell mediated immunity (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); Lymphoproliferative Syndrome 3 (ortholog); FOUND IN plasma membrane (ortholog) 4 88545410 88548780 - 22301074;30032202 116898071 MODEL JAAIVD010000003;XM_032899466 XP_032755357 CD70 antigen protein-coding 626064471 Commd6 COMM domain containing 6 ENCODES a protein that exhibits NF-kappaB binding (ortholog); INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog) 12 22941922 22948865 + 30032202 116913648 MODEL JAAIVD010000007;XM_032917917 XP_032773808 COMM domain-containing protein 6 protein-coding 626064479 Nup107 nucleoporin 107 ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN female gonad development (ortholog); mRNA export from nucleus (ortholog); nephron development (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); focal segmental glomerulosclerosis 1 (ortholog); Galloway-Mowat Syndrome 7 (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 1 195855933 195898198 - 22301074;30032202 116909326 MODEL JAAIVD010000025;XM_032912870;XM_032912877 XP_032768761;XP_032768768 nuclear pore complex protein Nup107 protein-coding 626064513 Cbfb core-binding factor subunit beta ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); definitive hemopoiesis (ortholog); lymphocyte differentiation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); acute myelomonocytic leukemia (ortholog); bone development disease (ortholog); FOUND IN nucleus (ortholog) 17 24899948 24943165 + 22301074;30032202 116886190 MODEL JAAIVD010000011;XM_032887563;XM_032887564 XP_032743454;XP_032743455 protein-coding 626064526 Dclre1c DNA cross-link repair 1C ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); single-stranded DNA endodeoxyribonuclease activity (ortholog); INVOLVED IN B cell differentiation (ortholog); chromosome organization (ortholog); DNA recombination (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Aicardi-Goutieres Syndrome 1 (ortholog); common variable immunodeficiency (ortholog); Ehlers-Danlos syndrome kyphoscoliotic type 1 (ortholog); FOUND IN Golgi apparatus (ortholog); nonhomologous end joining complex (ortholog); nucleoplasm (ortholog) 14 9878076 9909280 + 30032202 116883288 MODEL JAAIVD010000009;XM_032884281 XP_032740172 protein artemis protein-coding 626064544 LOC116884147 small nucleolar RNA SNORA2/SNORA34 family 14 70019551 70019687 + 116884147 MODEL JAAIVD010000009;XR_004385863 snorna 626064547 Pdcd1lg2 programmed cell death 1 ligand 2 INVOLVED IN negative regulation of activated T cell proliferation (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH autoimmune hepatitis (ortholog); Coxsackievirus Infections (ortholog); cutaneous leishmaniasis (ortholog) 2 29490638 29555660 + 30032202 116893765 MODEL JAAIVD010000001;XM_032895467 XP_032751358 protein-coding 626064557 Nek10 NIMA related kinase 10 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN mucociliary clearance (ortholog); positive regulation of MAP kinase activity (ortholog); positive regulation of protein autophosphorylation (ortholog); ASSOCIATED WITH primary ciliary dyskinesia 44 (ortholog); FOUND IN protein kinase complex (ortholog) 12 84754061 84834909 + 22301074 116913272 MODEL JAAIVD010000007;XM_032917409 XP_032773300 serine/threonine-protein kinase Nek10 protein-coding 626064584 Ablim2 actin binding LIM protein family member 2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN actin cytoskeleton (ortholog); myofibril (ortholog) 11 69197066 69321974 - 22301074;30032202 116912887 MODEL JAAIVD010000006;XM_032917134;XM_032917135;XM_032917136;XM_032917138;XM_032917139;XM_032917140;XM_032917141;XM_032917142 XP_032773025;XP_032773026;XP_032773027;XP_032773029;XP_032773030;XP_032773031;XP_032773032;XP_032773033 actin-binding LIM protein 2 protein-coding 626064620 Vdac2 voltage dependent anion channel 2 ENCODES a protein that exhibits ceramide binding (ortholog); cholesterol binding (ortholog); oxysterol binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); mitochondrial outer membrane permeabilization (ortholog); mitochondrial transmembrane transport (ortholog); ASSOCIATED WITH Burns (ortholog); Diabetic Nephropathies (ortholog); epilepsy (ortholog); FOUND IN acrosomal vesicle (ortholog); membrane (ortholog); membrane raft (ortholog) 12 91607747 91621729 + 22301074;30032202 116913089 MODEL JAAIVD010000007;XM_032917224 XP_032773115 voltage-dependent anion-selective channel protein 2 protein-coding 626064633 Nap1l4 nucleosome assembly protein 1 like 4 ENCODES a protein that exhibits nucleosome binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); ASSOCIATED WITH Hypoxia (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 2 6150385 6185808 + 22301074;30032202 116890832 MODEL JAAIVD010000001;XM_032891350;XM_032891351;XM_032891353 XP_032747241;XP_032747242;XP_032747244 nucleosome assembly protein 1-like 4 protein-coding 626064658 LOC116911336 SH2 domain-containing protein 1B 10 49467150 49492564 + 116911336 MODEL JAAIVD010000005;XM_032915253 XP_032771144 protein-coding 626064666 LOC116909617 olfactory receptor 1468-like 9 31627592 31628530 - 22301074;30032202 116909617 MODEL JAAIVD010000002;XM_032913242 XP_032769133 protein-coding 626064669 LOC116892899 zinc finger protein 58-like 2 199766237 199818328 + 30032202 116892899 MODEL JAAIVD010000001;XM_032894812;XM_032894813;XM_032894815;XM_032894816;XM_032894817 XP_032750703;XP_032750704;XP_032750706;XP_032750707;XP_032750708 protein-coding 626064689 Krt35 keratin 35 9 54839880 54843381 - 22301074;30032202 116909941 MODEL JAAIVD010000002;XM_032913715 XP_032769606 keratin, type I cuticular Ha5 protein-coding 626064699 LOC116913695 olfactory receptor 11H4-like 12 72600385 72601368 + 22301074 116913695 MODEL JAAIVD010000007;XM_032917986 XP_032773877 protein-coding 626064703 LOC116885060 small nucleolar RNA SNORA17 15 75490086 75490204 + 116885060 MODEL JAAIVD010000010 pseudo 626064704 LOC116896401 zinc finger protein 513-like 3 51766388 51769303 - 116896401 MODEL JAAIVD010000012 pseudo 626064705 LOC116914095 probable E3 ubiquitin-protein ligase TRIML2 12 88664102 88665642 - 116914095 MODEL JAAIVD010000007 pseudo 626064706 Exosc7 exosome component 7 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) 8 114250452 114275654 + 30032202 116908017 MODEL JAAIVD010000027;XM_032911279 XP_032767170 exosome complex component RRP42 protein-coding 626064718 LOC116903680 oogenesin-2-like 1 140952512 140969283 + 116903680 MODEL JAAIVD010000025 pseudo 626064719 Phka2 phosphorylase kinase regulatory subunit alpha 2 INVOLVED IN protein phosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease (ortholog); glycogen storage disease IXA (ortholog); FOUND IN phosphorylase kinase complex (ortholog) X 31851034 31952383 + 30032202 116888307 MODEL JAAIVD010000014;XM_032889580 XP_032745471 phosphorylase b kinase regulatory subunit alpha, liver isoform protein-coding 626064756 LOC116913151 sorbitol dehydrogenase-like 12 42752202 42755703 - 116913151 MODEL JAAIVD010000007 pseudo 626064757 Ltbp1 latent transforming growth factor beta binding protein 1 ENCODES a protein that exhibits microfibril binding (ortholog); molecular adaptor activity (ortholog); receptor ligand inhibitor activity (ortholog); INVOLVED IN aorta development (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH Autosomal Recessive Cutis Laxa Type IIE (ortholog); basal cell carcinoma (ortholog); congenital heart disease (ortholog); FOUND IN dendrite (ortholog); extracellular matrix (ortholog); large latent transforming growth factor-beta complex (ortholog) 7 17890765 18096261 - 22301074 116905920 MODEL JAAIVD010000026;XM_032908909;XM_032908910;XM_032908911;XM_032908912 XP_032764800;XP_032764801;XP_032764802;XP_032764803 latent-transforming growth factor beta-binding protein 1 protein-coding 626064797 Cfb complement factor B ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, alternative pathway (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); age related macular degeneration 14 (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN extracellular space (ortholog); symbiont cell surface (ortholog) 18 7448451 7454515 - 22301074;30032202 116887315 MODEL JAAIVD010000013;XM_032888904 XP_032744795 protein-coding 626064819 LOC116888909 60S ribosomal protein L18-like X 12509217 12516441 + 116888909 MODEL JAAIVD010000014 pseudo 626064820 Rps11 ribosomal protein S11 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); small-subunit processome (ortholog) 2 154419909 154422019 + 22301074;30032202 116892169 MODEL JAAIVD010000001;XM_032893673 XP_032749564 40S ribosomal protein S11 protein-coding 626064829 LOC116893743 40S ribosomal protein S12-like 2 23081877 23082309 + 22301074;30032202 116893743 MODEL JAAIVD010000001;XM_032895452 XP_032751343 protein-coding 626064833 LOC116913185 serine protease 55-like 12 60307985 60331742 + 22301074 116913185 MODEL JAAIVD010000007;XM_032917382 XP_032773273 protein-coding 626064841 Mstn myostatin ENCODES a protein that exhibits cytokine activity (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); cellular response to hypoxia (ortholog); muscle cell cellular homeostasis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Burns (ortholog); Cachexia (ortholog); FOUND IN extracellular space (ortholog) 4 122200328 122206691 - 22301074;30032202 116898164 MODEL JAAIVD010000003;XM_032899539 XP_032755430 growth/differentiation factor 8 protein-coding 626064848 LOC116895117 small nucleolar RNA U3 2 136411600 136411804 + 116895117 MODEL JAAIVD010000001;XR_004387265 snorna 626064851 LOC116909855 60S ribosomal protein L17-like 9 62977905 62978458 + 116909855 MODEL JAAIVD010000002 pseudo 626064852 LOC116892228 uncharacterized LOC116892228 2 155595015 155601740 + 116892228 MODEL JAAIVD010000001;XR_004386929 ncrna 626064857 Plxnc1 plexin C1 INVOLVED IN regulation of synapse pruning (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog) 1 173969016 174121448 - 22301074;30032202 116912852 MODEL JAAIVD010000025;XM_032917107 XP_032772998 plexin-C1 protein-coding 626064892 Pla2g2d phospholipase A2 group IID ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); negative regulation of T cell activation (ortholog); negative regulation of T cell proliferation (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; FOUND IN extracellular region (ortholog) 1 19421897 19427945 - 22301074;30032202 116886561 MODEL JAAIVD010000025;XM_032888082 XP_032743973 group IID secretory phospholipase A2 protein-coding 626064900 LOC116894249 olfactory receptor 14C36-like 2 114747840 114748835 + 22301074;30032202 116894249 MODEL JAAIVD010000001;XM_032895955 XP_032751846 protein-coding 626064903 LOC116906031 F-box/WD repeat-containing protein 2-like 7 34357737 34359054 - 116906031 MODEL JAAIVD010000026 pseudo 626064904 Grap2 GRB2 related adaptor protein 2 ASSOCIATED WITH Anaphylaxis (ortholog); hepatitis C (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome (ortholog) 1 250337435 250412820 + 22301074 116913803 MODEL JAAIVD010000025;XM_032918113 XP_032774004 GRB2-related adapter protein 2 protein-coding 626064916 Smarce1 SWI/SNF related BAF chromatin remodeling complex subunit E1 ENCODES a protein that exhibits N-acetyltransferase activity (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); neurogenesis (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 5 (ortholog); FOUND IN nBAF complex (ortholog); npBAF complex (ortholog); nucleoplasm (ortholog) 9 55216868 55237882 + 30032202 116908771 MODEL JAAIVD010000002;XM_032912136;XM_032912137;XM_032912138;XM_032912139 XP_032768027;XP_032768028;XP_032768029;XP_032768030 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 protein-coding 626064935 Bcl2a1 BCL2 related protein A1 ENCODES a protein that exhibits BH domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); response to cisplatin (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH allergic disease (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog) 8 82149101 82158167 - 22301074;30032202 116907325 MODEL JAAIVD010000027;XM_032910270 XP_032766161 bcl-2-related protein A1 protein-coding 626064941 LOC116903816 homeobox protein Rhox5-like 6 18538874 18539501 - 116903816 MODEL JAAIVD010000024 pseudo 626064942 Unc5cl unc-5 family C-terminal like ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of JNK cascade (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); membrane (ortholog) 4 81459176 81473783 - 22301074;30032202 116899065 MODEL JAAIVD010000003;XM_032900536 XP_032756427 UNC5C-like protein protein-coding 626064955 Csgalnact1 chondroitin sulfate N-acetylgalactosaminyltransferase 1 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); glucuronosyltransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); SKELETAL DYSPLASIA, MILD, WITH JOINT LAXITY AND ADVANCED BONE AGE (ortholog); FOUND IN Golgi apparatus (ortholog) 13 20694516 21027849 + 22301074;30032202 116914795 MODEL JAAIVD010000008;XM_032919242 XP_032775133 protein-coding 626064969 Efemp1 EGF containing fibulin extracellular matrix protein 1 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); INVOLVED IN camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adenoma (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 11 96427124 96494746 - 22301074;9268694 116912674 MODEL D89730;JAAIVD010000006;XM_032916791;XM_032916792;XM_032916793 BAA22265;XP_032772682;XP_032772683;XP_032772684 T16 EGF-containing fibulin-like extracellular matrix protein 1 protein-coding 626064991 LOC116907838 olfactory receptor 8B12-like 8 31459756 31460691 + 22301074;30032202 116907838 MODEL JAAIVD010000027;XM_032911024 XP_032766915 protein-coding 626064994 LOC116888203 WW domain binding protein 1-like X 126518178 126518969 - 116888203 MODEL JAAIVD010000014 pseudo 626064995 LOC116885071 small nucleolar RNA SNORA26 15 9454223 9454339 - 116885071 MODEL JAAIVD010000010;XR_004385945 snorna 626064998 LOC116906096 heat shock protein HSP 90-beta-like 7 73287170 73288234 - 22301074;30032202 116906096 MODEL JAAIVD010000026;XM_032909110 XP_032765001 protein-coding 626065002 LOC116904344 heterogeneous nuclear ribonucleoproteins C1/C2-like 6 71351684 71354197 + 116904344 MODEL JAAIVD010000024 pseudo 626065003 Wapl WAPL cohesin release factor ENCODES a protein that exhibits ATP-dependent protein-DNA unloader activity (ortholog); INVOLVED IN mitotic sister chromatid segregation (ortholog); negative regulation of DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); ASSOCIATED WITH clubfoot (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 10450709 10519920 + 30032202 116915015 MODEL JAAIVD010000008;XM_032919417;XM_032919418;XM_032919419;XM_032919420 XP_032775308;XP_032775309;XP_032775310;XP_032775311 wings apart-like protein homolog protein-coding 626065034 Cep57l1 centrosomal protein 57 like 1 ENCODES a protein that exhibits identical protein binding (ortholog) 18 41419762 41477179 - 22301074;30032202 116887242 MODEL JAAIVD010000013;XM_032888805;XM_032888806;XM_032888807;XM_032888808;XM_032888809 XP_032744696;XP_032744697;XP_032744698;XP_032744699;XP_032744700 centrosomal protein CEP57L1 protein-coding 626065063 LOC116883768 uncharacterized LOC116883768 14 5786879 5787509 - 116883768 MODEL JAAIVD010000009;XR_004385784 ncrna 626065067 Pax4 paired box 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN circadian rhythm (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); diabetic ketoacidosis (ortholog); hyperglycemia (ortholog) 6 111087172 111094699 + 22301074;30032202 116902920 MODEL JAAIVD010000024;XM_032905244 XP_032761135 paired box protein Pax-4 protein-coding 626065082 LOC116913570 chymase 12 69075968 69078704 + 22301074;30032202 116913570 MODEL JAAIVD010000007;XM_032917789 XP_032773680 protein-coding 626065091 LOC116908423 small nucleolar RNA SNORA17 8 41078170 41078285 + 116908423 MODEL JAAIVD010000027 pseudo 626065092 LOC116909309 40S ribosomal protein S2-like 9 46218449 46219245 + 116909309 MODEL JAAIVD010000002 pseudo 626065093 Ajm1 apical junction component 1 homolog ASSOCIATED WITH COVID-19 (ortholog) 5 11597294 11603675 + 30032202 116901288 MODEL JAAIVD010000023;XM_032903077;XM_032903078 XP_032758968;XP_032758969 protein-coding 626065104 Lamc3 laminin subunit gamma 3 INVOLVED IN astrocyte development (ortholog); cell morphogenesis (ortholog); radial glial cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); brain disease (ortholog); epilepsy (ortholog); FOUND IN basement membrane (ortholog) 5 3694765 3755063 - 116900047 MODEL JAAIVD010000023;XM_032901841 XP_032757732 laminin subunit gamma-3 protein-coding 626065136 LOC116890354 U6 spliceosomal RNA 1 76935416 76935519 - 116890354 MODEL JAAIVD010000025;XR_004386573 snrna 626065139 LOC116913903 pescadillo homolog 12 25921616 25923253 - 116913903 MODEL JAAIVD010000007 pseudo 626065140 Dohh deoxyhypusine hydroxylase ENCODES a protein that exhibits deoxyhypusine monooxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN peptidyl-lysine modification to peptidyl-hypusine (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly, Cerebral Atrophy, and Visual Impairment (ortholog); Pulmonary Arterial Hypertension (ortholog); pulmonary hypertension (ortholog) 1 153502354 153507041 - 22301074;30032202 116904314 MODEL JAAIVD010000025;XM_032907229;XM_032907232;XM_032907236 XP_032763120;XP_032763123;XP_032763127 protein-coding 626065154 Gk2 glycerol kinase 2 INVOLVED IN flagellated sperm motility (ortholog); sperm mitochondrial sheath assembly (ortholog); spermatogenesis (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog); sperm midpiece (ortholog) 11 6812011 6813907 + 22301074;30032202 116912599 MODEL JAAIVD010000006;XM_032916722 XP_032772613 protein-coding 626065159 Mas1 MAS1 proto-oncogene, G protein-coupled receptor ENCODES a protein that exhibits angiotensin receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); cellular response to peptide hormone stimulus (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Alveolar Bone Loss (ortholog); chronic kidney disease (ortholog); congestive heart failure (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 2 191569673 191580650 - 22301074;30032202 116892830 MODEL JAAIVD010000001;XM_032894714;XM_032894715;XM_032894716;XM_032894717;XM_032894718 XP_032750605;XP_032750606;XP_032750607;XP_032750608;XP_032750609 proto-oncogene Mas protein-coding 626065173 LOC116885337 foxo1-corepressor-like 16 1594277 1595828 - 116885337 MODEL JAAIVD010000004 pseudo 626065174 Abl1 ABL proto-oncogene 1, non-receptor tyrosine kinase ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); bubble DNA binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); activated T cell proliferation (ortholog); PARTICIPATES IN p53 signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cytoplasm (ortholog) 5 3836852 3938298 - 22301074;30032202 116901162 MODEL JAAIVD010000023;XM_032902807;XM_032902808 XP_032758698;XP_032758699 tyrosine-protein kinase ABL1 protein-coding 626065192 Rab38 RAB38, member RAS oncogene family ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); AP-2 adaptor complex binding (ortholog); AP-3 adaptor complex binding (ortholog); INVOLVED IN endosome to melanosome transport (ortholog); melanosome assembly (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH Albuminuria (ortholog); Hermansky-Pudlak syndrome (ortholog); proteinuria (ortholog); FOUND IN cell body (ortholog); early endosome (ortholog); early endosome lumen (ortholog) 2 112598334 112671311 - 22301074;30032202 116894236 MODEL JAAIVD010000001;XM_032895941 XP_032751832 ras-related protein Rab-38 protein-coding 626065199 Recql4 RecQ like helicase 4 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); bubble DNA binding (ortholog); DNA/DNA annealing activity (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of sister chromatid cohesion (ortholog); pigmentation (ortholog); ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); Baller-Gerold syndrome (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog) 1 249030647 249037777 - 22301074;30032202 116913386 MODEL JAAIVD010000025;XM_032917566 XP_032773457 ATP-dependent DNA helicase Q4 protein-coding 626065225 LOC116907051 olfactory receptor 147-like 8 32611641 32612594 + 22301074;30032202 116907051 MODEL JAAIVD010000027;XM_032910006 XP_032765897 protein-coding 626065228 LOC116887323 olfactory receptor 14J1-like 18 10574854 10575792 - 22301074;30032202 116887323 MODEL JAAIVD010000013;XM_032888917 XP_032744808 protein-coding 626065231 LOC116899745 U6 spliceosomal RNA 4 24232325 24232430 + 116899745 MODEL JAAIVD010000003;XR_004387760 snrna 626065234 LOC116914356 alpha-defensin 23-like 13 64785824 64786030 - 116914356 MODEL JAAIVD010000008 pseudo 626065235 Casr calcium sensing receptor ENCODES a protein that exhibits amino acid binding (ortholog); calcium ion binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bile acid secretion (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; E-cadherin signaling pathway; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH Albuminuria (ortholog); atherosclerosis (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); axon terminus (ortholog) 4 21356480 21427243 - 22301074;30032202 116898822 MODEL JAAIVD010000003;XM_032900174 XP_032756065 extracellular calcium-sensing receptor protein-coding 626065246 LOC116887979 interferon alpha-1-like 1 65473357 65473917 - 22301074;30032202 116887979 MODEL JAAIVD010000025;XM_032889419 XP_032745310 protein-coding 626065249 LOC116889509 small nucleolar RNA SNORA17 X 36103367 36103515 - 116889509 MODEL JAAIVD010000014 pseudo 626065250 Srp72 signal recognition particle 72 ENCODES a protein that exhibits 7S RNA binding (ortholog); ribosome binding (ortholog); signal recognition particle binding (ortholog); ASSOCIATED WITH Bone Marrow Failure Syndrome 1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); signal recognition particle (ortholog); signal recognition particle, endoplasmic reticulum targeting (ortholog) 11 33718453 33745573 + 22301074;30032202 116912520 MODEL JAAIVD010000006;XM_032916611 XP_032772502 signal recognition particle subunit SRP72 protein-coding 626065273 Aida axin interactor, dorsalization associated ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of JUN kinase activity (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) 10 61554232 61581539 + 30032202 116911045 MODEL JAAIVD010000005;XM_032914795 XP_032770686 axin interactor, dorsalization-associated protein protein-coding 626065287 LOC116914104 small nucleolar RNA SNORA5 12 48447533 48447663 + 116914104 MODEL JAAIVD010000007;XR_004389671 snorna 626065290 LOC116896936 selection and upkeep of intraepithelial T-cells protein 2-like 1 87218026 87252147 + 30032202 116896936 MODEL JAAIVD010000025;XM_032898535 XP_032754426 protein-coding 626065298 LOC116887738 60S acidic ribosomal protein P1-like 1 56948236 56948575 - 116887738 MODEL JAAIVD010000025 pseudo 626065299 Aifm2 AIF family member 2 ENCODES a protein that exhibits DNA binding (ortholog); electron-transferring-flavoprotein dehydrogenase activity (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); cellular detoxification (ortholog); negative regulation of ferroptosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 18 27536044 27560461 + 30032202 116887019 MODEL JAAIVD010000013;XM_032888506 XP_032744397 apoptosis inducing factor mitochondria associated 2;apoptosis-inducing factor 2 protein-coding 626065313 LOC116904485 igE-binding protein-like 6 146709398 146709925 + 116904485 MODEL JAAIVD010000024;XM_032907287 XP_032763178 protein-coding 626065317 Erh ERH mRNA splicing and mitosis factor ENCODES a protein that exhibits methyl-CpG binding (ortholog); FOUND IN methylosome (ortholog); midbody (ortholog); nucleus (ortholog) 7 94846849 94856563 - 116905223 MODEL JAAIVD010000026;XM_032908037 XP_032763928 enhancer of rudimentary homolog protein-coding 626065324 Vit vitrin ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); spinal cord development (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 7 14604179 14693615 - 30032202 116905613 MODEL JAAIVD010000026;XM_032908603 XP_032764494 protein-coding 626065342 Mnx1 motor neuron and pancreas homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron differentiation (ortholog); diaphragm development (ortholog); ASSOCIATED WITH Currarino syndrome (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleolus (ortholog) 6 157459168 157464205 + 22301074;30032202 116904240 MODEL JAAIVD010000024;XM_032907188 XP_032763079 motor neuron and pancreas homeobox protein 1 protein-coding 626065349 LOC116891794 hemoglobin subunit epsilon-Y2 2 101779584 101781050 + 22301074;30032202 116891794 MODEL JAAIVD010000001;XM_032893147 XP_032749038 protein-coding 626065356 LOC116906339 U6 spliceosomal RNA 7 75580782 75580885 + 116906339 MODEL JAAIVD010000026;XR_004388620 snrna 626065359 Cd3g CD3g molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); establishment or maintenance of cell polarity (ortholog); protein transport (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH immunodeficiency 17 (ortholog); severe combined immunodeficiency (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); cytosol (ortholog); plasma membrane (ortholog) 8 39504046 39509907 - 22301074;30032202 116907414 MODEL JAAIVD010000027;XM_032910376 XP_032766267 T-cell surface glycoprotein CD3 gamma chain protein-coding 626065369 LOC116910367 rRNA-processing protein FCF1 homolog 9 77610543 77611193 + 116910367 MODEL JAAIVD010000002 pseudo 626065370 Kcns1 potassium voltage-gated channel modifier subfamily S member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH intracranial hypertension (ortholog); FOUND IN nucleoplasm (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 5 153812305 153817265 + 22301074;30032202 116900789 MODEL JAAIVD010000023;XM_032902500 XP_032758391 potassium voltage-gated channel subfamily S member 1 protein-coding 626065376 Lrrc8d leucine rich repeat containing 8 VRAC subunit D ENCODES a protein that exhibits volume-sensitive anion channel activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); cellular response to osmotic stress (ortholog); cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); monoatomic ion channel complex (ortholog) 11 15423877 15533506 + 22301074 116912180 MODEL JAAIVD010000006;XM_032916110;XM_032916111;XM_032916113 XP_032772001;XP_032772002;XP_032772004 volume-regulated anion channel subunit LRRC8D protein-coding 626065389 Mtarc2 mitochondrial amidoxime reducing component 2 ENCODES a protein that exhibits molybdenum ion binding (ortholog); molybdopterin cofactor binding (ortholog); nitrate reductase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); nitrate metabolic process (ortholog); nitric oxide biosynthetic process (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); amphetamine abuse (ortholog); FOUND IN mitochondrion (ortholog) 10 62982405 63013847 - 22301074;30032202 116911345 MODEL JAAIVD010000005;XM_032915261 XP_032771152 protein-coding 626065400 Rtl4 retrotransposon Gag like 4 INVOLVED IN cognition (ortholog); norepinephrine metabolic process (ortholog) 1 98739615 98742647 + 22301074 116901848 MODEL JAAIVD010000025;XM_032904040 XP_032759931 retrotransposon Gag-like protein 4 protein-coding 626065405 Hoxb4 homeobox B4 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone marrow development (ortholog); definitive hemopoiesis (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog) 9 58062380 58065461 - 22301074;30032202 116908485 MODEL JAAIVD010000002;XM_032911641 XP_032767532 homeobox protein Hox-B4 protein-coding 626065411 Crbn cereblon ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN locomotory exploration behavior (ortholog); negative regulation of large conductance calcium-activated potassium channel activity (ortholog); negative regulation of monoatomic ion transmembrane transport (ortholog); ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); autosomal recessive intellectual developmental disorder (ortholog); autosomal recessive intellectual developmental disorder 2 (ortholog); FOUND IN Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 6 39909391 39930187 + 30032202 116903445 MODEL JAAIVD010000024;XM_032906000 XP_032761891 protein cereblon protein-coding 626065426 Myo16 myosin XVI ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cerebellum development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); myosin complex (ortholog); nucleoplasm (ortholog) 13 73227563 73610448 - 22301074;30032202 116914402 MODEL JAAIVD010000008;XM_032918632 XP_032774523 unconventional myosin-XVI protein-coding 626065465 LOC116894279 vomeronasal type-1 receptor 4-like 2 121667541 121668533 + 22301074;30032202 116894279 MODEL JAAIVD010000001;XM_032895991 XP_032751882 protein-coding 626065469 Kcnn1 potassium calcium-activated channel subfamily N member 1 ENCODES a protein that exhibits calmodulin binding (ortholog); inward rectifier potassium channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 13 13085503 13099627 - 22301074;30032202 116914658 MODEL JAAIVD010000008;XM_032919058 XP_032774949 small conductance calcium-activated potassium channel protein 1 protein-coding 626065483 LOC116911103 uncharacterized LOC116911103 10 50334741 50357884 - 116911103 MODEL JAAIVD010000005;XR_004389312 ncrna 626065488 Dclre1b DNA cross-link repair 1B ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); beta-lactamase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); protection from non-homologous end joining at telomere (ortholog); telomere capping (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita 8 (ortholog); Fanconi anemia complementation group C (ortholog); Hoyeraal-Hreidarsson Syndrome (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); nuclear body (ortholog) 3 54262339 54271005 + 30032202 116896442 MODEL JAAIVD010000012;XM_032897595 XP_032753486 5' exonuclease Apollo protein-coding 626065496 LOC116906435 small nucleolar RNA SNORA48 7 85215988 85216128 + 116906435 MODEL JAAIVD010000026;XR_004388695 snorna 626065499 LOC116888296 60S ribosomal protein L30-like 1 82478449 82478835 + 116888296 MODEL JAAIVD010000025 pseudo 626065500 LOC116903823 cytochrome c, somatic ENCODES a protein that exhibits enzyme binding (ortholog); heme binding (ortholog); INVOLVED IN apoptotic process (ortholog); glial cell apoptotic process (ortholog); hydrogen peroxide metabolic process (ortholog); PARTICIPATES IN cardiolipin metabolic pathway; ceramide signaling pathway; electron transport chain pathway; ASSOCIATED WITH brain ischemia (ortholog); Chloracne (ortholog); cholangiocarcinoma (ortholog); FOUND IN apoptosome (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) 6 90515515 90517245 + 22301074;30032202 116903823 MODEL JAAIVD010000024;XM_032906536 XP_032762427 protein-coding 626065507 Scpep1 serine carboxypeptidase 1 ENCODES a protein that exhibits serine-type carboxypeptidase activity (ortholog); INVOLVED IN blood vessel diameter maintenance (ortholog); negative regulation of blood pressure (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 9 81875076 81904322 + 22301074;30032202 116909108 MODEL JAAIVD010000002;XM_032912584 XP_032768475 retinoid-inducible serine carboxypeptidase protein-coding 626065524 Pyroxd2 pyridine nucleotide-disulphide oxidoreductase domain 2 INVOLVED IN mitochondrion organization (ortholog); ASSOCIATED WITH Leigh disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 41822028 41849503 - 22301074 116891182 MODEL JAAIVD010000001;XM_032891999;XR_004386819;XR_004386820 XP_032747890 pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 protein-coding 626065548 Rtraf RNA transcription, translation and transport factor ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); mitotic spindle (ortholog) 12 89651607 89662220 - 30032202 116913298 MODEL JAAIVD010000007;XM_032917425;XM_032917426 XP_032773316;XP_032773317 RNA transcription, translation and transport factor protein protein-coding 626065563 LOC116888836 highly divergent homeobox-like X 117932808 117957004 + 22301074 116888836 MODEL JAAIVD010000014;XM_032890110 XP_032746001 protein-coding 626065571 Pex3 peroxisomal biogenesis factor 3 ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN peroxisome membrane biogenesis (ortholog); peroxisome organization (ortholog); protein import into peroxisome membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); nucleoplasm (ortholog) 2 223629332 223673525 + 22301074;30032202 116893008 MODEL JAAIVD010000001;XM_032894970 XP_032750861 protein-coding 626065587 Rrp12 ribosomal RNA processing 12 homolog PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytosol (ortholog); nucleolus (ortholog); plasma membrane (ortholog) 2 40976993 41008429 - 116891165 MODEL JAAIVD010000001;XM_032891968 XP_032747859 RRP12-like protein protein-coding 626065625 LOC116914358 60 kDa heat shock protein, mitochondrial-like 13 66071790 66081337 + 116914358 MODEL JAAIVD010000008 pseudo 626065626 LOC116890531 U1 spliceosomal RNA 1 133825336 133825499 + 116890531 MODEL JAAIVD010000025;XR_004386712 snrna 626065629 Gjc3 gap junction protein gamma 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN myelination (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN myelin sheath (ortholog) 16 15409369 15420433 - 22301074;30032202 116885669 MODEL JAAIVD010000004;XM_032886980 XP_032742871 gap junction gamma-3 protein protein-coding 626065635 LOC116902621 small nucleolar RNA SNORD70 5 6652813 6652899 - 116902621 MODEL JAAIVD010000023;XR_004388199 snorna 626065638 Spindoc spindlin interactor and repressor of chromatin binding INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog); site of DNA damage (ortholog) 2 410215 432546 + 30032202 116894795 MODEL JAAIVD010000001;XM_032896447 XP_032752338 spindlin interactor and repressor of chromatin-binding protein protein-coding 626065648 Mansc4 MANSC domain containing 4 6 4743011 4752478 - 116903100 MODEL JAAIVD010000024;XM_032905424 XP_032761315 MANSC domain-containing protein 4 protein-coding 626065655 LOC116908993 olfactory receptor 3A1-like 9 92960485 92961441 + 22301074;30032202 116908993 MODEL JAAIVD010000002;XM_032912462 XP_032768353 protein-coding 626065659 Ankrd44 ankyrin repeat domain 44 ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, SEIZURES, AND ABSENT LANGUAGE (ortholog) 4 129111610 129389482 - 22301074;30032202 116899386 MODEL JAAIVD010000003;XM_032901107 XP_032756998 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B protein-coding 626065691 Snu13 small nuclear ribonucleoprotein 13 ENCODES a protein that exhibits ATPase binding (ortholog); box C/D sno(s)RNA binding (ortholog); snoRNA binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog); mRNA splicing, via spliceosome (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; spliceosome pathway; FOUND IN box C/D methylation guide snoRNP complex (ortholog); dense fibrillar component (ortholog); nucleolus (ortholog) 1 251780717 251786276 - 22301074;30032202 116914187 MODEL JAAIVD010000025;XM_032918414 XP_032774305 NHP2-like protein 1 protein-coding 626065698 LOC116914221 60S ribosomal protein L21-like 13 51746647 51747053 + 116914221 MODEL JAAIVD010000008 pseudo 626065699 LOC116898204 prostaglandin-E(2) 9-reductase-like 4 138886732 138899258 - 30032202 116898204 MODEL JAAIVD010000003;XM_032899562 XP_032755453 protein-coding 626065710 Chst14 carbohydrate sulfotransferase 14 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan metabolic process (ortholog); ASSOCIATED WITH Adducted Thumbs Syndrome (ortholog); autism spectrum disorder (ortholog); clubfoot (ortholog) 5 97104151 97106201 + 22301074;30032202 116900595 MODEL JAAIVD010000023;XM_032902310;XM_032902312 XP_032758201;XP_032758203 protein-coding 626065720 LOC116905762 uncharacterized LOC116905762 7 6531502 6536681 + 116905762 MODEL JAAIVD010000026;XR_004388565 ncrna 626065724 LOC116900856 olfactory receptor 8K1-like 5 63626153 63626827 - 116900856 MODEL JAAIVD010000023 pseudo 626065725 Znf639 zinc finger protein 639 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of cell growth (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 3 122476641 122484789 - 30032202 116896967 MODEL JAAIVD010000012;XM_032898543 XP_032754434 protein-coding 626065734 LOC116895042 small nucleolar RNA SNORA17 2 31143585 31143718 + 116895042 MODEL JAAIVD010000001;XR_004387227 snorna 626065737 LOC116896477 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 3 58652660 58658355 - 22301074 116896477 MODEL JAAIVD010000012;XM_032897642 XP_032753533 protein-coding 626065743 Mrpl54 mitochondrial ribosomal protein L54 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 1 153625607 153627798 + 30032202 116904458 MODEL JAAIVD010000025;XM_032907275 XP_032763166 39S ribosomal protein L54, mitochondrial protein-coding 626065750 Adrb1 adrenoceptor beta 1 ENCODES a protein that exhibits alpha-2A adrenergic receptor binding (ortholog); amine binding (ortholog); beta1-adrenergic receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Anaphylaxis (ortholog); Angina Pectoris (ortholog); aortic valve stenosis (ortholog); FOUND IN early endosome (ortholog); membrane (ortholog); neuronal dense core vesicle (ortholog) 2 59434985 59438003 - 22301074;30032202 116891330 MODEL JAAIVD010000001;XM_032892261 XP_032748152 beta-1 adrenergic receptor protein-coding 626065755 LOC116886010 small nucleolar RNA SNORA49 16 43653746 43653878 + 116886010 MODEL JAAIVD010000004;XR_004386079 snorna 626065758 LOC116894307 DNA (cytosine-5)-methyltransferase 3A-like 2 142926590 142928607 - 116894307 MODEL JAAIVD010000001 pseudo 626065759 LOC116913807 60S ribosomal protein L17-like 12 45136524 45137428 - 116913807 MODEL JAAIVD010000007 pseudo 626065760 LOC116890193 keratin, type II cytoskeletal 6A-like 1 261450522 261456069 + 116890193 MODEL JAAIVD010000025 pseudo 626065761 Glyr1 glyoxylate reductase 1 homolog ENCODES a protein that exhibits chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); DNA binding (ortholog); INVOLVED IN transcription elongation-coupled chromatin remodeling (ortholog); transcription initiation-coupled chromatin remodeling (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 16859159 16894799 + 22301074;30032202 116909079 MODEL JAAIVD010000002;XM_032912552;XM_032912553;XM_032912554;XM_032912555 XP_032768443;XP_032768444;XP_032768445;XP_032768446 putative oxidoreductase GLYR1 protein-coding 626065789 Rab11fip1 RAB11 family interacting protein 1 INVOLVED IN negative regulation of adiponectin secretion (ortholog); FOUND IN cytosol (ortholog) 13 59346433 59373340 + 30032202 116914652 MODEL JAAIVD010000008;XM_032919047;XM_032919048 XP_032774938;XP_032774939 rab11 family-interacting protein 1 protein-coding 626065801 Pcdhac2 protocadherin alpha subfamily C, 2 INVOLVED IN serotonergic neuron axon guidance (ortholog) 15 750100 793891 + 22301074 116884964 MODEL JAAIVD010000010;XM_032886169 XP_032742060 protocadherin alpha-C2 protein-coding 626065809 LOC116884537 oocyte-specific histone RNA stem-loop-binding protein 2-like 15 9598488 9606098 - 30032202 116884537 MODEL JAAIVD010000010;XM_032885673;XM_032885674 XP_032741564;XP_032741565 protein-coding 626065825 C11H1orf146 chromosome 11 C1orf146 homolog INVOLVED IN reciprocal meiotic recombination (ortholog); synaptonemal complex assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromosome (ortholog) 11 17303368 17316009 + 22301074;30032202 116912396 MODEL JAAIVD010000006;XM_032916457 XP_032772348 uncharacterized protein C1orf146 homolog protein-coding 626065834 Btd biotinidase ENCODES a protein that exhibits biotinidase activity (ortholog); INVOLVED IN biotin metabolic process (ortholog); PARTICIPATES IN biotin metabolic pathway; biotinidase deficiency pathway; holocarboxylase synthetase deficiency pathway; ASSOCIATED WITH autistic disorder (ortholog); biotin deficiency (ortholog); biotinidase deficiency (ortholog); FOUND IN apical part of cell (ortholog); extracellular region (ortholog); nucleolus (ortholog) 13 7368413 7398358 + 22301074 116914587 MODEL JAAIVD010000008;XM_032918945;XM_032918946;XM_032918947;XM_032918948 XP_032774836;XP_032774837;XP_032774838;XP_032774839 protein-coding 626065853 Mmp25 matrix metallopeptidase 25 INVOLVED IN hard palate development (ortholog); FOUND IN plasma membrane (ortholog) 9 940816 953758 - 22301074;30032202 116910033 MODEL JAAIVD010000002;XM_032913819 XP_032769710 matrix metalloproteinase-25 protein-coding 626065866 Slc17a6 solute carrier family 17 member 6 ENCODES a protein that exhibits chloride channel activity (ortholog); L-glutamate uniporter activity (ortholog); potassium:proton antiporter activity (ortholog); INVOLVED IN hippocampus development (ortholog); hyaloid vascular plexus regression (ortholog); L-glutamate import (ortholog); ASSOCIATED WITH learning disability (ortholog); Memory Disorders (ortholog); transient cerebral ischemia (ortholog); FOUND IN early endosome (ortholog); excitatory synapse (ortholog); neuron projection (ortholog) 2 148967958 149007749 - 22301074;30032202 116892065 MODEL JAAIVD010000001;XM_032893536;XM_032893537 XP_032749427;XP_032749428 vesicular glutamate transporter 2 protein-coding 626065887 LOC116894147 olfactory receptor 52W1 2 104203898 104204878 + 22301074 116894147 MODEL JAAIVD010000001;XM_032895866 XP_032751757 protein-coding 626065891 LOC116894579 60S ribosomal protein L7a-like 2 180365675 180366481 - 116894579 MODEL JAAIVD010000001 pseudo 626065892 Dazl deleted in azoospermia like ENCODES a protein that exhibits identical protein binding (ortholog); mRNA 3'-UTR binding (ortholog); translation activator activity (ortholog); INVOLVED IN female meiosis II (ortholog); germ cell development (ortholog); oocyte maturation (ortholog); ASSOCIATED WITH Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 4 79656442 79673202 + 22301074 116898026 MODEL JAAIVD010000003;XM_032899416 XP_032755307 deleted in azoospermia-like protein-coding 626065906 LOC116888180 fructose-bisphosphate aldolase A-like X 118121063 118122121 + 116888180 MODEL JAAIVD010000014 pseudo 626065907 LOC116901040 heterogeneous nuclear ribonucleoprotein H-like 5 131169849 131171667 - 116901040 MODEL JAAIVD010000023 pseudo 626065908 Napepld N-acyl phosphatidylethanolamine phospholipase D ENCODES a protein that exhibits bile acid binding (ortholog); identical protein binding (ortholog); N-acylphosphatidylethanolamine-specific phospholipase D activity (ortholog); INVOLVED IN host-mediated modulation of intestinal microbiota composition (ortholog); N-acylethanolamine metabolic process (ortholog); N-acylphosphatidylethanolamine metabolic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cocaine dependence (ortholog); Huntington's disease (ortholog); FOUND IN Golgi apparatus (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); postsynaptic membrane (ortholog) 6 150969365 151017690 - 22301074;30032202 116904177 MODEL JAAIVD010000024;XM_032907080;XM_032907081;XM_032907082;XM_032907084;XM_032907085;XM_032907086 XP_032762971;XP_032762972;XP_032762973;XP_032762975;XP_032762976;XP_032762977 N-acyl-phosphatidylethanolamine-hydrolyzing phospholipase D protein-coding 626065934 Glp2r glucagon like peptide 2 receptor ENCODES a protein that exhibits glucagon receptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog) 9 47319597 47382624 - 22301074;30032202 116910041 MODEL JAAIVD010000002;XM_032913828 XP_032769719 glucagon-like peptide 2 receptor protein-coding 626065950 LOC116894860 U6 spliceosomal RNA 2 160277270 160277376 - 116894860 MODEL JAAIVD010000001;XR_004387074 snrna 626065953 Map1lc3a microtubule associated protein 1 light chain 3 alpha ENCODES a protein that exhibits phospholipid binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute myocardial infarction (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN autolysosome (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 5 134631977 134633706 + 30032202 116902174 MODEL JAAIVD010000023;XM_032904519 XP_032760410 microtubule-associated proteins 1A/1B light chain 3A protein-coding 626065961 LOC116895044 developmentally-regulated GTP-binding protein 1-like 1 76592288 76593171 - 116895044 MODEL JAAIVD010000025 pseudo 626065962 LOC116895678 ATP synthase subunit beta, mitochondrial-like 3 198808350 198810227 - 116895678 MODEL JAAIVD010000012 pseudo 626065963 Ndufb7 NADH:ubiquinone oxidoreductase subunit B7 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); ASSOCIATED WITH depressive disorder (ortholog); mitochondrial metabolism disease (ortholog); Nuclear Type Mitochondrial Complex I Deficiency 39 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 17 16700679 16705038 - 22301074;30032202 116886121 MODEL JAAIVD010000011;XM_032887459 XP_032743350 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 7 protein-coding 626065970 Pstpip2 proline-serine-threonine phosphatase interacting protein 2 ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); SAPHO syndrome (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); membrane (ortholog) 15 54230759 54312314 - 30032202 116884755 MODEL JAAIVD010000010;XM_032885974 XP_032741865 proline-serine-threonine phosphatase-interacting protein 2 protein-coding 626065988 LOC116897830 arylacetamide deacetylase-like 4 4 11352734 11358268 + 116897830 MODEL JAAIVD010000003 pseudo 626065989 Ube2ql1 ubiquitin conjugating enzyme E2 QL1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 2 201113794 201154565 - 116892908 MODEL JAAIVD010000001;XM_032894829 XP_032750720 ubiquitin conjugating enzyme E2 Q family like 1;ubiquitin-conjugating enzyme E2Q-like protein 1 protein-coding 626065995 Padi2 peptidyl arginine deiminase 2 ENCODES a protein that exhibits histone H3R26 arginine deiminase activity (ortholog); nuclear estrogen receptor binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); estrogen receptor signaling pathway (ortholog); negative regulation of chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog) 1 17197990 17240361 - 22301074;30032202 116893533 MODEL JAAIVD010000025;XM_032895258 XP_032751149 protein-arginine deiminase type-2 protein-coding 626066015 Fbxl12 F-box and leucine rich repeat protein 12 INVOLVED IN ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); ubiquitin ligase complex (ortholog) 8 16907237 16913456 - 22301074;30032202 116906717 MODEL JAAIVD010000027;XM_032909524;XM_032909525 XP_032765415;XP_032765416 F-box/LRR-repeat protein 12 protein-coding 626066025 LOC116885549 CD209 antigen-like protein C 16 1789246 1796870 - 116885549 MODEL JAAIVD010000004;XM_032886842 XP_032742733 protein-coding 626066032 Nop2 NOP2 nucleolar protein ENCODES a protein that exhibits rRNA (cytosine-C5-)-methyltransferase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); positive regulation of cell population proliferation (ortholog); regulation of signal transduction by p53 class mediator (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog) 6 22755908 22766876 - 22301074;30032202 116903261 MODEL JAAIVD010000024;XM_032905652 XP_032761543 probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase protein-coding 626066053 Amelx amelogenin X-linked ENCODES a protein that exhibits calcium ion binding (ortholog); growth factor activity (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN amelogenesis (ortholog); cell adhesion (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1E (ortholog); autosomal dominant hypocalcemia (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog); endocytic vesicle (ortholog) X 28713203 28724212 - 22301074;30032202 116888720 MODEL JAAIVD010000014;XM_032890012 XP_032745903 amelogenin, X isoform protein-coding 626066063 Slc8a3 solute carrier family 8 member A3 ENCODES a protein that exhibits calcium:monoatomic cation antiporter activity (ortholog); calcium:monoatomic cation antiporter activity involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion export across plasma membrane (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); brain ischemia (ortholog); prostate cancer (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cell projection (ortholog) 7 95423281 95570170 - 22301074;30032202 116905232 MODEL JAAIVD010000026;XM_032908053;XM_032908054;XM_032908055;XM_032908056 XP_032763944;XP_032763945;XP_032763946;XP_032763947 sodium/calcium exchanger 3 protein-coding 626066084 LOC116883221 glycogenin-1-like 14 49563018 49563576 - 116883221 MODEL JAAIVD010000009 pseudo 626066085 LOC116887304 olfactory receptor 2A12-like 1 38356008 38356955 - 22301074 116887304 MODEL JAAIVD010000025;XM_032888888 XP_032744779 protein-coding 626066088 Fastkd3 FAST kinase domains 3 INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); positive regulation of mitochondrial translation (ortholog); regulation of mitochondrial mRNA stability (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 2 199901899 199910574 + 22301074;30032202 116892900 MODEL JAAIVD010000001;XM_032894818;XM_032894819 XP_032750709;XP_032750710 FAST kinase domain-containing protein 3, mitochondrial protein-coding 626066102 LOC116890276 40S ribosomal protein S21-like 1 18867436 18867671 + 116890276 MODEL JAAIVD010000025 pseudo 626066103 Abi2 abl interactor 2 ENCODES a protein that exhibits identical protein binding (ortholog); signaling adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell migration (ortholog); dendrite development (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); cytosol (ortholog) 4 134533085 134682719 + 30032202 116898519 MODEL JAAIVD010000003;XM_032899745 XP_032755636 protein-coding 626066119 Wnt2 Wnt family member 2 ENCODES a protein that exhibits cytokine activity (ortholog); frizzled binding (ortholog); receptor ligand activity (ortholog); INVOLVED IN atrial cardiac muscle tissue morphogenesis (ortholog); canonical Wnt signaling pathway (ortholog); cardiac epithelial to mesenchymal transition (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 6 120941348 120981396 + 22301074;30032202 116902941 MODEL JAAIVD010000024;XM_032905268 XP_032761159 protein Wnt-2 protein-coding 626066128 LOC116889924 olfactory receptor 6C3-like 1 160789573 160790508 + 22301074;30032202 116889924 MODEL JAAIVD010000025;XM_032890739 XP_032746630 protein-coding 626066131 Lcp2 lymphocyte cytosolic protein 2 INVOLVED IN mast cell activation (ortholog); positive regulation of protein kinase activity (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); immunodeficiency 81 (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); plasma membrane raft (ortholog) 9 6859879 6906143 + 22301074;30032202 116910047 MODEL JAAIVD010000002;XM_032913837 XP_032769728 protein-coding 626066156 LOC116889649 ATP synthase subunit beta-like 22301074 116889649 MODEL JAAIVD010000045;XM_032890554 XP_032746445 protein-coding 626066157 LOC116900846 alpha-enolase-like 5 60809921 60812476 + 116900846 MODEL JAAIVD010000023 pseudo 626066158 LOC116906185 zinc transporter 9-like 7 113078240 113079846 - 116906185 MODEL JAAIVD010000026 pseudo 626066159 LOC116884367 vomeronasal type-2 receptor 116-like 15 42251766 42274591 - 116884367 MODEL JAAIVD010000010;XR_004385867 pseudo 626066165 LOC116910139 peptidyl-prolyl cis-trans isomerase D-like 1 205886728 205887838 - 116910139 MODEL JAAIVD010000025 pseudo 626066166 LOC116911784 kinesin-like protein KIF28P 10 58021620 58073331 - 22301074;30032202 116911784 MODEL JAAIVD010000005;XM_032915779 XP_032771670 protein-coding 626066193 Galnt9 polypeptide N-acetylgalactosaminyltransferase 9 16 43728491 43806963 - 30032202 116885514 MODEL JAAIVD010000004;XM_032886805 XP_032742696 protein-coding 626066208 LOC116912288 actin-related protein 2-like 11 43375828 43376776 + 116912288 MODEL JAAIVD010000006;XR_004389439 pseudo 626066211 LOC116901095 transcriptional adapter 3-like 5 156082161 156094162 - 116901095 MODEL JAAIVD010000023 pseudo 626066212 Ermard ER membrane associated RNA degradation ASSOCIATED WITH periventricular nodular heterotopia (ortholog); Periventricular Nodular Heterotopia 6 (ortholog) 14 939899 959665 - 116883314 MODEL JAAIVD010000009;XM_032884366 XP_032740257 endoplasmic reticulum membrane-associated RNA degradation protein protein-coding 626066234 Ahnak AHNAK nucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); S100 protein binding (ortholog); structural molecule activity conferring elasticity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); regulation of voltage-gated calcium channel activity (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); Chloracne (ortholog); COVID-19 (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell contact zone (ortholog); costamere (ortholog) 2 8922640 8957235 - 22301074;30032202 116890908 MODEL JAAIVD010000001;XM_032891527;XM_032891528;XM_032891530;XM_032891531;XM_032891532;XM_032891533;XM_032891534;XM_032891535;XM_032891536;XM_032891537 XP_032747418;XP_032747419;XP_032747421;XP_032747422;XP_032747423;XP_032747424;XP_032747425;XP_032747426;XP_032747427;XP_032747428 neuroblast differentiation-associated protein AHNAK protein-coding 626066274 Dzip3 DAZ interacting zinc finger protein 3 ENCODES a protein that exhibits phosphatase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); FOUND IN cytoplasm (ortholog) 4 33423385 33486108 - 30032202 116898885 MODEL JAAIVD010000003;XM_032900261 XP_032756152 E3 ubiquitin-protein ligase DZIP3 protein-coding 626066311 Znf597 zinc finger protein 597 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 9 17960523 17977696 + 22301074 116909300 MODEL JAAIVD010000002;XM_032912841 XP_032768732 protein-coding 626066318 Nphp4 nephrocystin 4 INVOLVED IN flagellated sperm motility (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH atypical hemolytic-uremic syndrome (ortholog); Bardet-Biedl syndrome (ortholog); CAKUT (ortholog); FOUND IN cell-cell junction (ortholog); centriole (ortholog); centrosome (ortholog) 1 8178465 8206761 - 30032202 116890112 MODEL JAAIVD010000025;XM_032890854 XP_032746745 nephrocystin-4 protein-coding 626066341 LOC116904251 olfactory receptor 6C4-like 6 73141872 73142803 + 116904251 MODEL JAAIVD010000024 pseudo 626066342 Dnah14 dynein axonemal heavy chain 14 ASSOCIATED WITH epilepsy (ortholog); Hydrops Fetalis (ortholog); Neurodevelopmental Disorders (ortholog) 10 59928686 60149836 + 22301074;30032202 116910928 MODEL JAAIVD010000005;XM_032914677 XP_032770568 dynein heavy chain 14, axonemal protein-coding 626066431 Ca11 carbonic anhydrase 11 ASSOCIATED WITH COVID-19 (ortholog); FOUND IN basolateral plasma membrane (ortholog) 2 153816569 153821718 - 30032202 116892131 MODEL JAAIVD010000001;XM_032893618;XM_032893619;XM_032893620;XM_032893621 XP_032749509;XP_032749510;XP_032749511;XP_032749512 carbonic anhydrase-related protein 11 protein-coding 626066450 LOC116912161 ATP-binding cassette sub-family G member 3-like 11 14918700 14968810 + 22301074;30032202 116912161 MODEL JAAIVD010000006;XM_032916081 XP_032771972 protein-coding 626066468 Preb prolactin regulatory element binding ENCODES a protein that exhibits GTPase binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN COPII vesicle coating (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); FOUND IN endoplasmic reticulum exit site (ortholog); endoplasmic reticulum membrane (ortholog); nucleus (ortholog) 7 23125356 23129128 + 22301074;30032202 116905990 MODEL JAAIVD010000026;XM_032909019 XP_032764910 prolactin regulatory element-binding protein protein-coding 626066481 Qsox2 quiescin sulfhydryl oxidase 2 FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 5 10843311 10883787 + 22301074;30032202 116901277 MODEL JAAIVD010000023;XM_032903046;XM_032903047 XP_032758937;XP_032758938 sulfhydryl oxidase 2 protein-coding 626066506 LOC116899090 uncharacterized LOC116899090 4 82565552 82743645 - 116899090 MODEL JAAIVD010000003;XR_004387688 ncrna 626066513 LOC116906275 uncharacterized LOC116906275 7 130013998 130014718 - 116906275 MODEL JAAIVD010000026 pseudo 626066514 LOC116902093 galactokinase-like 5 130230274 130231448 + 116902093 MODEL JAAIVD010000023 pseudo 626066515 Ccdc62 coiled-coil domain containing 62 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); cellular response to estradiol stimulus (ortholog); estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH spermatogenic failure 67 (ortholog); FOUND IN acrosomal vesicle (ortholog); nucleus (ortholog) 16 29890267 29928014 - 116885341 MODEL JAAIVD010000004;XM_032886611;XM_032886612;XM_032886613;XM_032886614;XM_032886615;XM_032886616;XR_004386004 XP_032742502;XP_032742503;XP_032742504;XP_032742505;XP_032742506;XP_032742507 coiled-coil domain-containing protein 62 protein-coding 626066550 LOC116910764 U6 spliceosomal RNA 9 49909087 49909192 + 116910764 MODEL JAAIVD010000002;XR_004389273 snrna 626066553 Hypk huntingtin interacting protein K ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); protein stabilization (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); nucleoplasm (ortholog) 5 99613645 99615042 + 30032202 116901866 MODEL JAAIVD010000023;XM_032904064;XM_032904066 XP_032759955;XP_032759957 huntingtin-interacting protein K protein-coding 626066565 Jakmip2 janus kinase and microtubule interacting protein 2 ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); melanoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN Golgi apparatus (ortholog) 15 1321791 1477683 + 30032202 116884464 MODEL JAAIVD010000010;XM_032885568;XM_032885569;XM_032885570 XP_032741459;XP_032741460;XP_032741461 janus kinase and microtubule-interacting protein 2 protein-coding 626066595 Tmem191c transmembrane protein 191C 4 2545866 2547730 + 116898633 MODEL JAAIVD010000003;XM_032899853 XP_032755744 protein-coding 626066609 LOC116895043 small nucleolar RNA SNORA17 2 226521924 226522053 - 116895043 MODEL JAAIVD010000001;XR_004387228 snorna 626066612 LOC116915001 probable ribosome biogenesis protein RLP24 13 18551717 18552217 - 116915001 MODEL JAAIVD010000008 pseudo 626066613 LOC116900580 olfactory receptor 4F15 5 90419394 90420356 - 22301074 116900580 MODEL JAAIVD010000023;XM_032902303 XP_032758194 protein-coding 626066616 LOC116906821 olfactory receptor 8B3-like 8 32357877 32358812 - 22301074;30032202 116906821 MODEL JAAIVD010000027;XM_032909704 XP_032765595 protein-coding 626066620 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92716973 92717044 - 116904851 MODEL JAAIVD010000024 trna 626066621 Rsrc2 arginine and serine rich coiled-coil 2 ASSOCIATED WITH obesity (ortholog) 16 30105672 30125158 + 116885281 MODEL JAAIVD010000004;XM_032886521;XM_032886522;XM_032886523;XM_032886524;XM_032886526 XP_032742412;XP_032742413;XP_032742414;XP_032742415;XP_032742417 arginine/serine-rich coiled-coil protein 2 protein-coding 626066645 LOC116913976 olfactory receptor 4N5 12 73171279 73172205 + 22301074 116913976 MODEL JAAIVD010000007;XM_032918248 XP_032774139 protein-coding 626066648 LOC116894036 olfactory receptor 51G2-like 2 102129939 102130886 + 22301074 116894036 MODEL JAAIVD010000001;XM_032895755 XP_032751646 protein-coding 626066651 LOC116902861 olfactory receptor-like protein OLF3 6 97656637 97657572 - 22301074 116902861 MODEL JAAIVD010000024;XM_032905190 XP_032761081 protein-coding 626066654 Utf1 undifferentiated embryonic cell transcription factor 1 ENCODES a protein that exhibits HMG box domain binding (ortholog); TBP-class protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN male gonad development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 61910440 61911610 - 116893869 MODEL JAAIVD010000001;XM_032895592;XM_032895593 XP_032751483;XP_032751484 protein-coding 626066663 Dync2li1 dynein cytoplasmic 2 light intermediate chain 1 ENCODES a protein that exhibits dynein heavy chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); determination of left/right symmetry (ortholog); intraciliary transport involved in cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); genetic disease (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); centrosome (ortholog) 7 8251927 8284362 - 30032202 116905778 MODEL JAAIVD010000026;XM_032908752 XP_032764643 cytoplasmic dynein 2 light intermediate chain 1 protein-coding 626066680 LOC116913211 granzyme C-like 12 68653866 68660300 + 116913211 MODEL JAAIVD010000007 pseudo 626066681 LOC116899831 small Cajal body-specific RNA 6 4 159899879 159900141 + 116899831 MODEL JAAIVD010000003;XR_004387830 ncrna 626066684 Vps26a VPS26, retromer complex component A INVOLVED IN endocytic recycling (ortholog); retrograde transport, endosome to Golgi (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH diabetic retinopathy (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) 18 28283730 28314984 - 22301074;30032202 116887037 MODEL JAAIVD010000013;XM_032888528;XM_032888529 XP_032744419;XP_032744420 vacuolar protein sorting-associated protein 26A protein-coding 626066700 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41513989 41514061 - 116884159 MODEL JAAIVD010000009 trna 626066701 LOC116889613 40S ribosomal protein S15-like 1 142115237 142115657 + 116889613 MODEL JAAIVD010000025 pseudo 626066702 LOC116910274 olfactory receptor 1361-like 9 38376204 38378762 - 22301074;30032202 116910274 MODEL JAAIVD010000002;XM_032914152 XP_032770043 protein-coding 626066706 LOC116895395 olfactory receptor 5V1-like 3 59906102 59907026 + 116895395 MODEL JAAIVD010000012 pseudo 626066707 LOC116900316 olfactory receptor 1052-like 5 64204916 64205854 - 22301074;30032202 116900316 MODEL JAAIVD010000023;XM_032902073 XP_032757964 protein-coding 626066710 Traip TRAF interacting protein ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of interferon-beta production (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); site of DNA damage (ortholog) 8 99282854 99303378 + 116907559 MODEL JAAIVD010000027;XM_032910582 XP_032766473 E3 ubiquitin-protein ligase TRAIP protein-coding 626066729 LOC116890991 olfactory receptor 5A1-like 2 12441266 12442222 + 22301074;30032202 116890991 MODEL JAAIVD010000001;XM_032891665 XP_032747556 protein-coding 626066732 LOC116884740 cystatin-C-like 1 271430928 271431395 + 22301074;30032202 116884740 MODEL JAAIVD010000025;XM_032885962 XP_032741853 protein-coding 626066737 LOC116892084 zinc finger protein 431-like 2 151676602 151696291 - 22301074 116892084 MODEL JAAIVD010000001;XM_032893558 XP_032749449 protein-coding 626066746 LOC116890170 palmitoyltransferase ZDHHC3-like 1 257927890 257929110 + 30032202 116890170 MODEL JAAIVD010000025;XM_032890905 XP_032746796 protein-coding 626066751 Hnrnpa3 heterogeneous nuclear ribonucleoprotein A3 ENCODES a protein that exhibits mRNA binding (ortholog); RNA transmembrane transporter activity (ortholog); INVOLVED IN mRNA transport (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH schizophrenia (ortholog); silicosis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 5 53012652 53022854 + 22301074 116901535 MODEL JAAIVD010000023;XM_032903515;XM_032903516;XM_032903517;XM_032903518 XP_032759406;XP_032759407;XP_032759408;XP_032759409 protein-coding 626066773 Ttc21b tetratricopeptide repeat domain 21B ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN Bergmann glial cell differentiation (ortholog); cerebellar Purkinje cell differentiation (ortholog); cerebellum development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 4 (ortholog); FOUND IN intraciliary transport particle A (ortholog) 5 43642370 43717223 - 22301074;30032202 116901466 MODEL JAAIVD010000023;XM_032903417 XP_032759308 tetratricopeptide repeat protein 21B protein-coding 626066806 Ipo8 importin 8 ASSOCIATED WITH genetic disease (ortholog); VISS syndrome (ortholog) 6 6411036 6470212 - 22301074;30032202 116903110 MODEL JAAIVD010000024;XM_032905444;XM_032905445 XP_032761335;XP_032761336 importin-8 protein-coding 626066837 LOC116883887 prolactin-7D1-like 14 46793200 46800137 - 22301074;30032202 116883887 MODEL JAAIVD010000009;XM_032885153;XM_032885154 XP_032741044;XP_032741045 protein-coding 626066853 LOC116894411 keratin-associated protein 14 2 158595221 158596053 - 116894411 MODEL JAAIVD010000001;XM_032896116 XP_032752007 protein-coding 626066858 LOC116889779 60S ribosomal protein L24-like 116889779 MODEL JAAIVD010000175 pseudo 626066859 Helb DNA helicase B ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); DNA helicase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); DNA replication, synthesis of primer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); DNA replication factor A complex (ortholog) 1 198055438 198082300 - 116909411 MODEL JAAIVD010000025;XM_032912981 XP_032768872 protein-coding 626066876 Cdh16 cadherin 16 INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH thyroid cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 17 12885073 12895265 - 22301074;30032202 116886429 MODEL JAAIVD010000011;XM_032887915;XM_032887916 XP_032743806;XP_032743807 cadherin-16 protein-coding 626066900 Btla B and T lymphocyte associated ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); immune response-regulating cell surface receptor signaling pathway (ortholog); negative regulation of alpha-beta T cell proliferation (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 29990685 30010694 + 30032202 116898872 MODEL JAAIVD010000003;XM_032900241 XP_032756132 B- and T-lymphocyte attenuator protein-coding 626066910 LOC116908459 U6 spliceosomal RNA 8 57304138 57304244 + 116908459 MODEL JAAIVD010000027;XR_004388977 snrna 626066913 C4H3orf52 chromosome 4 C3orf52 homolog ASSOCIATED WITH hypotrichosis 15 (ortholog); FOUND IN plasma membrane (ortholog) 4 30357692 30380716 - 116898878 MODEL JAAIVD010000003;XM_032900250 XP_032756141 TPA-induced transmembrane protein protein-coding 626066922 Ambp alpha-1-microglobulin/bikunin precursor ENCODES a protein that exhibits antioxidant activity (ortholog); carbohydrate binding (ortholog); chondroitin sulfate binding (ortholog); INVOLVED IN cellular oxidant detoxification (ortholog); cellular response to reactive oxygen species (ortholog); cytochrome c metabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); matrix side of mitochondrial inner membrane (ortholog) 1 90412817 90424373 + 22301074;30032202 116888401 MODEL JAAIVD010000025;XM_032889677 XP_032745568 protein AMBP protein-coding 626066936 Capn1 calpain 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent cysteine-type endopeptidase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); mammary gland involution (ortholog); negative regulation of actin filament polymerization (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); aortic atherosclerosis (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 1684705 1710075 + 22301074;30032202 116890685 MODEL JAAIVD010000001;XM_032891096;XM_032891097;XM_032891098 XP_032746987;XP_032746988;XP_032746989 calpain-1 catalytic subunit protein-coding 626066968 LOC116896946 succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial-like 3 119738044 119739276 + 116896946 MODEL JAAIVD010000012 pseudo 626066969 LOC116902789 vomeronasal type-2 receptor 116-like 6 77209587 77273865 - 22301074;30032202 116902789 MODEL JAAIVD010000024;XM_032905127 XP_032761018 protein-coding 626066979 LOC116892859 uncharacterized LOC116892859 2 193316988 193321031 + 116892859 MODEL JAAIVD010000001;XR_004386980;XR_004386981 ncrna 626066985 Dgka diacylglycerol kinase alpha ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; FOUND IN cytosol (ortholog); plasma membrane (ortholog) 1 156192877 156211247 - 22301074;30032202 116906409 MODEL JAAIVD010000025;XM_032909219 XP_032765110 protein-coding 626067012 C9 complement C9 INVOLVED IN cell killing (ortholog); complement activation (ortholog); complement activation, GZMK pathway (ortholog); ASSOCIATED WITH age related macular degeneration 15 (ortholog); autosomal dominant polycystic kidney disease (ortholog); complement component 9 deficiency (ortholog); FOUND IN extracellular space (ortholog); membrane attack complex (ortholog); other organism cell membrane (ortholog) 3 174987356 175035384 + 22301074 116895631 MODEL JAAIVD010000012;XM_032896839 XP_032752730 complement component C9 protein-coding 626067027 LOC116886291 40S ribosomal protein S10-like 1 14449086 14449638 + 30032202 116886291 MODEL JAAIVD010000025;XM_032887727 XP_032743618 protein-coding 626067031 Bhmt betaine--homocysteine S-methyltransferase ENCODES a protein that exhibits betaine-homocysteine S-methyltransferase activity (ortholog); identical protein binding (ortholog); methyltransferase activity (ortholog); INVOLVED IN amino-acid betaine metabolic process (ortholog); L-methionine salvage (ortholog); methionine biosynthetic process (ortholog); PARTICIPATES IN choline metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); cerebral infarction (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); extracellular space (ortholog) 3 202691326 202711715 + 22301074;30032202 116896055 MODEL JAAIVD010000012;XM_032897049 XP_032752940 betaine--homocysteine S-methyltransferase 1 protein-coding 626067042 LOC116899898 small nucleolar RNA SNORA17 4 166699144 166699241 + 116899898 MODEL JAAIVD010000003 pseudo 626067043 Fam151b family with sequence similarity 151 member B INVOLVED IN photoreceptor cell development (ortholog) 3 203819031 203854229 + 30032202 116897299 MODEL JAAIVD010000012;XM_032899038 XP_032754929 protein FAM151B protein-coding 626067053 Trnar-ccg transfer RNA arginine (anticodon CCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41395716 41395788 - 116884153 MODEL JAAIVD010000009 trna 626067054 Alg13 ALG13 UDP-N-acetylglucosaminyltransferase subunit ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); negative regulation of TORC1 signaling (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); UDP-N-acetylglucosamine transferase complex (ortholog) X 96559713 96617212 - 22301074;30032202 116889337 MODEL JAAIVD010000014;XM_032890454 XP_032746345 putative bifunctional UDP-N-acetylglucosamine transferase and deubiquitinase ALG13 protein-coding 626067085 LOC116886617 uncharacterized LOC116886617 1 20773195 20775930 - 116886617 MODEL JAAIVD010000025;XM_032888127 XP_032744018 uncharacterized protein LOC116886617 protein-coding 626067091 LOC116904529 immunoglobulin-binding protein 1b 6 10820479 10822237 + 22301074;30032202 116904529 MODEL JAAIVD010000024;XM_032907322 XP_032763213 protein-coding 626067096 Bora BORA aurora kinase A activator ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN regulation of mitotic nuclear division (ortholog); regulation of mitotic spindle organization (ortholog); regulation of protein localization (ortholog); FOUND IN meiotic spindle (ortholog) 12 25441525 25466954 - 30032202 116913583 MODEL JAAIVD010000007;XM_032917811 XP_032773702 protein aurora borealis protein-coding 626067112 Ubn1 ubinuclein 1 INVOLVED IN nucleosome assembly (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); FOUND IN bicellular tight junction (ortholog); centriolar satellite (ortholog); nuclear body (ortholog) 9 16823796 16859074 - 30032202 116909078 MODEL JAAIVD010000002;XM_032912549;XM_032912550;XM_032912551 XP_032768440;XP_032768441;XP_032768442 ubinuclein-1 protein-coding 626067140 Bcas3 BCAS3 microtubule associated cell migration factor ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); beta-tubulin binding (ortholog); chromatin binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to estrogen stimulus (ortholog); positive regulation of catalytic activity (ortholog); ASSOCIATED WITH breast cancer (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cell leading edge (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 9 84918303 85369437 - 22301074;30032202 116909418 MODEL JAAIVD010000002;XM_032912985;XM_032912986;XM_032912987;XM_032912988;XM_032912989;XM_032912990;XM_032912991;XM_032912992;XM_032912993 XP_032768876;XP_032768877;XP_032768878;XP_032768879;XP_032768880;XP_032768881;XP_032768882;XP_032768883;XP_032768884 breast carcinoma-amplified sequence 3 protein-coding 626067182 Tmem9b TMEM9 domain family member B INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN early endosome membrane (ortholog); lysosomal membrane (ortholog) 2 91715924 91734405 + 22301074;30032202 116891671 MODEL JAAIVD010000001;XM_032892927 XP_032748818 transmembrane protein 9B protein-coding 626067191 Serpinb9 serpin family B member 9 ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity involved in apoptotic process (ortholog); protease binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); cellular response to estrogen stimulus (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH Chloracne (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 14 52029333 52041237 + 22301074;30032202 116883733 MODEL JAAIVD010000009;XM_032884965 XP_032740856 serpin B9 protein-coding 626067202 Trnar-ccu transfer RNA arginine (anticodon CCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 837631 837703 - 116910816 MODEL JAAIVD010000002 trna 626067203 Gpt glutamic--pyruvic transaminase INVOLVED IN cellular response to insulin stimulus (ortholog); positive regulation of gluconeogenesis (ortholog); response to nutrient levels (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; alanine metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Bone Fractures (ortholog); FOUND IN extracellular space (ortholog) 1 249023841 249026707 + 22301074;30032202 116913367 MODEL JAAIVD010000025;XM_032917536 XP_032773427 alanine aminotransferase 1 protein-coding 626067218 LOC116883481 leukocyte elastase inhibitor A-like 14 52110291 52118142 + 30032202 116883481 MODEL JAAIVD010000009;XM_032884637 XP_032740528 protein-coding 626067228 Tmem170a transmembrane protein 170A INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); nuclear envelope organization (ortholog); nuclear pore complex assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) 17 31558213 31570830 - 30032202 116886436 MODEL JAAIVD010000011;XM_032887921;XM_032887922 XP_032743812;XP_032743813 protein-coding 626067239 LOC116893537 40S ribosomal protein S20-like 2 201901356 201902335 - 116893537 MODEL JAAIVD010000001 pseudo 626067240 Zdhhc24 zDHHC palmitoyltransferase 24 ASSOCIATED WITH Usher syndrome (ortholog) 2 2775296 2781469 - 30032202 116890755 MODEL JAAIVD010000001;XM_032891211 XP_032747102 probable palmitoyltransferase ZDHHC24;zinc finger DHHC-type containing 24 protein-coding 626067247 LOC116914364 sushi domain-containing protein 3-like 13 75220954 75229374 + 116914364 MODEL JAAIVD010000008 pseudo 626067248 Txlng taxilin gamma ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN regulation of bone mineralization (ortholog); regulation of cell cycle (ortholog); regulation of cell cycle process (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog) X 23545723 23591374 + 22301074;30032202 116888407 MODEL JAAIVD010000014;XM_032889679;XM_032889680 XP_032745570;XP_032745571 gamma-taxilin protein-coding 626067265 Pik3c3 phosphatidylinositol 3-kinase catalytic subunit type 3 ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); phosphatidylinositol kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; inositol metabolic pathway; phosphatidylinositol 3-kinase signaling pathway; FOUND IN autolysosome (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 15 13687435 13765091 - 22301074;30032202 116884441 MODEL JAAIVD010000010;XM_032885534;XM_032885535 XP_032741425;XP_032741426 protein-coding 626067299 Znf219 zinc finger protein 219 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN limb bud formation (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 12 71883948 71897951 + 30032202 116914087 MODEL JAAIVD010000007;XM_032918392;XM_032918393;XM_032918394;XM_032918395;XM_032918396;XM_032918397;XM_032918398;XM_032918400;XM_032918401 XP_032774283;XP_032774284;XP_032774285;XP_032774286;XP_032774287;XP_032774288;XP_032774289;XP_032774291;XP_032774292 protein-coding 626067330 C6H12orf60 chromosome 6 C12orf60 homolog 6 12598419 12612781 - 116904535 MODEL JAAIVD010000024;XM_032907328;XM_032907329 XP_032763219;XP_032763220 uncharacterized protein C12orf60 homolog protein-coding 626067341 Xndc1n XRCC1 N-terminal domain containing 1, N-terminal like FOUND IN chromosome (ortholog); nucleolus (ortholog) 2 100360427 100380267 + 22301074;30032202 116891781 MODEL JAAIVD010000001;XM_032893123;XM_032893124;XM_032893125;XM_032893126 XP_032749014;XP_032749015;XP_032749016;XP_032749017 putative short transient receptor potential channel 2-like protein;short transient receptor potential channel 2 protein-coding 626067362 Gje1 gap junction protein epsilon 1 INVOLVED IN cell morphogenesis (ortholog); lens development in camera-type eye (ortholog); organ growth (ortholog); ASSOCIATED WITH peripheral nervous system disease (ortholog) 2 222513717 222515444 + 22301074;30032202 116894700 MODEL JAAIVD010000001;XM_032896398 XP_032752289 putative gap junction epsilon-1 protein protein-coding 626067367 Tlnrd1 talin rod domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN stress fiber (ortholog) 2 116450073 116452087 + 30032202 116891881 MODEL JAAIVD010000001;XM_032893292 XP_032749183 talin rod domain-containing protein 1 protein-coding 626067372 LOC116883914 F-box/LRR-repeat protein 21 14 81533149 81543342 - 22301074;30032202 116883914 MODEL JAAIVD010000009;XM_032885172 XP_032741063 protein-coding 626067381 Dip2b disco interacting protein 2 homolog B ENCODES a protein that exhibits alpha-tubulin binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); positive regulation of peptidyl-lysine acetylation (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder type FRA12A (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 1 262860855 262932138 - 116890246 MODEL JAAIVD010000025;XM_032890975 XP_032746866 disco-interacting protein 2 homolog B protein-coding 626067420 Acadvl acyl-CoA dehydrogenase very long chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); fatty-acyl-CoA binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiac Arrhythmias (ortholog); dilated cardiomyopathy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrial nucleoid (ortholog) 9 49616754 49621945 - 22301074;30032202 116910247 MODEL JAAIVD010000002;XM_032914137 XP_032770028 very long-chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 626067444 Apeh acylaminoacyl-peptide hydrolase ENCODES a protein that exhibits identical protein binding (ortholog); omega peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN amyloid-beta metabolic process (ortholog); proteolysis (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog) 8 99414830 99424433 - 22301074;30032202 116907567 MODEL JAAIVD010000027;XM_032910591 XP_032766482 acylamino-acid-releasing enzyme protein-coding 626067470 Tcn2 transcobalamin 2 ENCODES a protein that exhibits cargo receptor ligand activity (ortholog); cobalamin binding (ortholog); molecular carrier activity (ortholog); INVOLVED IN cobalamin transport (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adenoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 11 72929384 72944549 - 22301074;30032202 116912518 MODEL JAAIVD010000006;XM_032916609 XP_032772500 transcobalamin-2 protein-coding 626067484 LOC116889344 insulin receptor substrate 4-like X 91672830 91676523 + 30032202 116889344 MODEL JAAIVD010000014;XM_032890459 XP_032746350 protein-coding 626067487 LOC116885375 uncharacterized LOC116885375 16 30637101 30640163 - 116885375 MODEL JAAIVD010000004;XR_004386006 ncrna 626067492 LOC116884125 U6 spliceosomal RNA 14 42234070 42234166 + 116884125 MODEL JAAIVD010000009 pseudo 626067493 Fam81a family with sequence similarity 81 member A ENCODES a protein that exhibits molecular condensate scaffold activity (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 8 64447609 64506155 - 116906719 MODEL JAAIVD010000027;XM_032909528;XM_032909529 XP_032765419;XP_032765420 protein FAM81A protein-coding 626067509 Peli2 pellino E3 ubiquitin protein ligase family member 2 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); positive regulation of protein phosphorylation (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 12 74782406 74915983 - 22301074;30032202 116913424 MODEL JAAIVD010000007;XM_032917608 XP_032773499 E3 ubiquitin-protein ligase pellino homolog 2 protein-coding 626067519 Uck1 uridine-cytidine kinase 1 ENCODES a protein that exhibits cytidine kinase activity (ortholog); uridine kinase activity (ortholog); INVOLVED IN CTP salvage (ortholog); UMP salvage (ortholog); ASSOCIATED WITH nerve compression syndrome (ortholog) 5 3377167 3382987 + 22301074;30032202 116901153 MODEL JAAIVD010000023;XM_032902794;XR_004387963 XP_032758685 protein-coding 626067534 Fndc4 fibronectin type III domain containing 4 INVOLVED IN negative regulation of inflammatory response (ortholog); response to transforming growth factor beta (ortholog); ASSOCIATED WITH lipid storage disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 7 22784233 22787921 + 22301074 116905970 MODEL JAAIVD010000026;XM_032908978 XP_032764869 fibronectin type III domain-containing protein 4 protein-coding 626067545 Jund JunD proto-oncogene, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); cellular response to fatty acid (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); cardiomyopathy (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 13 12947216 12949665 + 30032202 116914556 MODEL JAAIVD010000008;XM_032918905 XP_032774796 transcription factor jun-D protein-coding 626067550 LOC116914990 activating transcription factor 7-interacting protein 2-like 13 26634484 26732078 - 22301074;30032202 116914990 MODEL JAAIVD010000008;XM_032919397 XP_032775288 protein-coding 626067555 Slc25a41 solute carrier family 25 member 41 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ADP transport (ortholog); ATP transport (ortholog); mitochondrial ADP transmembrane transport (ortholog); FOUND IN mitochondrion (ortholog) 4 88413595 88421186 - 22301074;30032202 116898069 MODEL JAAIVD010000003;XM_032899464 XP_032755355 protein-coding 626067566 Fkbp3 FKBP prolyl isomerase 3 FOUND IN nucleus (ortholog) 7 78765938 78777357 - 22301074 116905104 MODEL JAAIVD010000026;XM_032907840 XP_032763731 peptidyl-prolyl cis-trans isomerase FKBP3 protein-coding 626067577 Man1a1 mannosidase alpha class 1A member 1 ENCODES a protein that exhibits mannosyl-oligosaccharide 1,2-alpha-mannosidase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); mannose trimming involved in glycoprotein ERAD pathway (ortholog); protein targeting to ER (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 18 30847557 31022924 - 22301074;30032202 116886811 MODEL JAAIVD010000013;XM_032888241 XP_032744132 mannosyl-oligosaccharide 1,2-alpha-mannosidase IA protein-coding 626067594 Anxa6 annexin A6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); cholesterol binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); calcium ion transport (ortholog); mitochondrial calcium ion homeostasis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); hepatocellular carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); intercalated disc (ortholog); late endosome membrane (ortholog) 9 37412647 37464825 - 22301074;30032202 116908835 MODEL JAAIVD010000002;XM_032912256 XP_032768147 protein-coding 626067624 Atp2b1 ATPase plasma membrane Ca2+ transporting 1 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); calcium ion transmembrane transporter activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN calcium ion export (ortholog); calcium ion export across plasma membrane (ortholog); cellular response to corticosterone stimulus (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 30 (ortholog); autosomal dominant intellectual developmental disorder 66 (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 1 178040110 178151463 + 22301074;30032202 116908535 MODEL JAAIVD010000025;XM_032911728;XM_032911737;XM_032911745;XM_032911752 XP_032767619;XP_032767628;XP_032767636;XP_032767643 plasma membrane calcium-transporting ATPase 1 protein-coding 626067657 LOC116907893 secreted seminal-vesicle Ly-6 protein 1 8 32840661 32843478 + 116907893 MODEL JAAIVD010000027;XM_032911091 XP_032766982 protein-coding 626067665 LOC116905543 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like 7 131023 132246 + 116905543 MODEL JAAIVD010000026 pseudo 626067666 LOC116908431 small nucleolar RNA U105B 8 17154105 17154184 + 116908431 MODEL JAAIVD010000027;XR_004388962 snorna 626067669 Sumo1 small ubiquitin like modifier 1 ENCODES a protein that exhibits enzyme binding (ortholog); potassium channel regulator activity (ortholog); protein tag activity (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to heat (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN sumoylation pathway; ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN dendrite (ortholog); fibrillar center (ortholog); glutamatergic synapse (ortholog) 30032202 116889766 MODEL JAAIVD010000081;XM_032890626 XP_032746517 small ubiquitin-related modifier 1 protein-coding 626067670 Dpysl2 dihydropyrimidinase like 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); endocytosis (ortholog); olfactory bulb development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); cilium (ortholog); cytosol (ortholog) 12 57572941 57679714 + 22301074;30032202;7472434 116913409 MODEL JAAIVD010000007;XM_032917593;XM_032917594;Z46882 CAA86981;XP_032773484;XP_032773485 TOAD-64 dihydropyrimidinase-related protein 2 protein-coding 626067691 Prr5l proline rich 5 like ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); negative regulation of protein phosphorylation (ortholog); positive regulation of intracellular protein transport (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN TORC2 complex (ortholog) 5 79554036 79723176 - 30032202 116901673 MODEL JAAIVD010000023;XM_032903786;XM_032903787;XM_032903788 XP_032759677;XP_032759678;XP_032759679 proline-rich protein 5-like protein-coding 626067710 LOC116888195 DDB1- and CUL4-associated factor 13-like X 123442622 123443963 + 116888195 MODEL JAAIVD010000014 pseudo 626067711 Dtna dystrobrevin alpha ENCODES a protein that exhibits PDZ domain binding (ortholog); phosphatase binding (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell projection (ortholog) 15 20155151 20513538 - 22301074;30032202 116884981 MODEL JAAIVD010000010;XM_032886199;XM_032886201 XP_032742090;XP_032742092 protein-coding 626067744 Inhbc inhibin subunit beta C ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 205792035 205805740 - 22301074;30032202 116890044 MODEL JAAIVD010000025;XM_032890815 XP_032746706 inhibin beta C chain protein-coding 626067750 LOC116897644 U2 spliceosomal RNA 3 132762219 132762377 + 116897644 MODEL JAAIVD010000012 pseudo 626067751 Arpp19 cAMP regulated phosphoprotein 19 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mitotic cell cycle (ortholog); positive regulation of gluconeogenesis (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); synapse (ortholog) 8 69318383 69340940 + 30032202 116906651 MODEL JAAIVD010000027;XM_032909434;XM_032909435 XP_032765325;XP_032765326 cAMP-regulated phosphoprotein 19 protein-coding 626067761 LOC116908396 small nucleolar RNA SNORA17 8 114297569 114297701 + 116908396 MODEL JAAIVD010000027;XR_004388940 snorna 626067764 Prrg4 proline rich and Gla domain 4 ENCODES a protein that exhibits WW domain binding (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN plasma membrane (ortholog) 5 82740014 82763580 - 22301074;30032202 116901708 MODEL JAAIVD010000023;XM_032903840;XM_032903841 XP_032759731;XP_032759732 transmembrane gamma-carboxyglutamic acid protein 4 protein-coding 626067777 LOC116907929 olfactory receptor 7E24-like 8 16227193 16228125 - 22301074;30032202 116907929 MODEL JAAIVD010000027;XM_032911142 XP_032767033 protein-coding 626067781 LOC116887134 L-amino-acid oxidase-like 1 37971070 37977447 - 30032202 116887134 MODEL JAAIVD010000025;XM_032888684 XP_032744575 protein-coding 626067792 Phf10 PHD finger protein 10 INVOLVED IN embryonic brain development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; FOUND IN npBAF complex (ortholog); nucleoplasm (ortholog) 14 974616 991285 + 22301074 116884010 MODEL JAAIVD010000009;XM_032885248;XM_032885249 XP_032741139;XP_032741140 protein-coding 626067812 LOC116903228 sentrin-specific protease 2-like 6 19650863 19651504 - 116903228 MODEL JAAIVD010000024 pseudo 626067813 LOC116894828 small nucleolar RNA SNORD14 2 85248541 85248627 + 116894828 MODEL JAAIVD010000001;XR_004387044 snorna 626067816 LOC116900229 solute carrier family 25 member 39-like 5 62332200 62333355 - 116900229 MODEL JAAIVD010000023 pseudo 626067817 Mis18bp1 MIS18 binding protein 1 FOUND IN CENP-A recruiting complex (ortholog) 7 78841422 78895455 - 116906110 MODEL JAAIVD010000026;XM_032909114 XP_032765005 mis18-binding protein 1 protein-coding 626067837 Hint3 histidine triad nucleotide binding protein 3 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); identical protein binding (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 2 204678580 204690215 - 22301074 116892926 MODEL JAAIVD010000001;XM_032894856;XM_032894857 XP_032750747;XP_032750748 histidine triad nucleotide-binding protein 3 protein-coding 626067849 Bbip1 BBSome interacting protein 1 INVOLVED IN B cell homeostasis (ortholog); cilium assembly (ortholog); eating behavior (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 18 (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN BBSome (ortholog); ciliary membrane (ortholog); cytoplasm (ortholog) 2 53368356 53382566 - 22301074;30032202 116891291 MODEL JAAIVD010000001;XM_032892197;XM_032892198;XM_032892199;XM_032892200;XM_032892201;XM_032892202 XP_032748088;XP_032748089;XP_032748090;XP_032748091;XP_032748092;XP_032748093 BBSome-interacting protein 1 protein-coding 626067870 Nrip1 nuclear receptor interacting protein 1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); nuclear estrogen receptor binding (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); PARTICIPATES IN estrogen signaling pathway; forkhead class A signaling pathway; retinoic acid signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); CAKUT (ortholog); CAKUT3 (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); fibrillar center (ortholog) 4 65671165 65733831 + 30032202 116899049 MODEL JAAIVD010000003;XM_032900517;XM_032900518;XM_032900519;XM_032900521 XP_032756408;XP_032756409;XP_032756410;XP_032756412 nuclear receptor-interacting protein 1 protein-coding 626067885 LOC116887922 testis-expressed protein 11-like X 58589079 58613624 + 30032202 116887922 MODEL JAAIVD010000014;XM_032889388 XP_032745279 protein-coding 626067896 LOC116899807 small nucleolar RNA SNORD22 4 71370572 71370696 + 116899807 MODEL JAAIVD010000003;XR_004387809 snorna 626067899 C1ql2 complement C1q like 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); postsynaptic density assembly (ortholog); regulation of synapse maturation (ortholog); FOUND IN cerebellar climbing fiber to Purkinje cell synapse (ortholog); extracellular region (ortholog); glutamatergic synapse (ortholog) 10 12924534 12927148 + 22301074 116911102 MODEL JAAIVD010000005;XM_032914936 XP_032770827 complement C1q-like protein 2 protein-coding 626067905 Gse1 Gse1 coiled-coil protein INVOLVED IN gene expression (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH stomach cancer (ortholog) 17 40127450 40220094 + 116886690 MODEL JAAIVD010000011;XM_032888183;XM_032888184;XM_032888185;XM_032888186;XM_032888187 XP_032744074;XP_032744075;XP_032744076;XP_032744077;XP_032744078 genetic suppressor element 1 protein-coding 626067933 Tmc8 transmembrane channel like 8 ENCODES a protein that exhibits protein sequestering activity (ortholog); tumor necrosis factor binding (ortholog); INVOLVED IN intracellular zinc ion homeostasis (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of protein-containing complex assembly (ortholog); ASSOCIATED WITH epidermodysplasia verruciformis (ortholog); Epidermodysplasia Verruciformis 1 (ortholog); Epidermodysplasia Verruciformis 2 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 9 66276179 66286005 - 30032202 116909936 MODEL JAAIVD010000002;XM_032913710 XP_032769601 transmembrane channel-like protein 8 protein-coding 626067952 LOC116910659 small nucleolar RNA SNORA70 9 83460642 83460764 - 116910659 MODEL JAAIVD010000002 pseudo 626067953 Nipbl NIPBL cohesin loading factor ENCODES a protein that exhibits chromatin binding (ortholog); chromo shadow domain binding (ortholog); cohesin loader activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to X-ray (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH bone development disease (ortholog); brachydactyly (ortholog); Chromosome Breakage (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); integrator complex (ortholog) 3 172043623 172207381 + 30032202 116897138 MODEL JAAIVD010000012;XM_032898802 XP_032754693 nipped-B-like protein protein-coding 626068004 LOC116897503 small nucleolar RNA SNORA28 3 91957538 91957663 + 116897503 MODEL JAAIVD010000012;XR_004387523 snorna 626068007 LOC116887667 proto-oncogene tyrosine-protein kinase ROS-like 18 28801918 28831965 + 22301074;30032202 116887667 MODEL JAAIVD010000013;XM_032889263 XP_032745154 protein-coding 626068025 Cdc34 cell division cycle 34, ubiquitin conjugating enzyme ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); positive regulation of inclusion body assembly (ortholog); positive regulation of neuron apoptotic process (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog) 1 155185664 155191344 - 30032202 116905729 MODEL JAAIVD010000025;XM_032908698 XP_032764589 cell division cycle 34, ubiqiutin conjugating enzyme;ubiquitin-conjugating enzyme E2 R1 protein-coding 626068034 Oas3 2'-5'-oligoadenylate synthetase 3 ENCODES a protein that exhibits 2'-5'-oligoadenylate synthetase activity (ortholog); ATP binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); defense response to virus (ortholog); MDA-5 signaling pathway (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 33044830 33068448 + 30032202 116885266 MODEL JAAIVD010000004;XM_032886499 XP_032742390 2'-5'-oligoadenylate synthase 3 protein-coding 626068053 LOC116897488 small nucleolar RNA SNORD45 3 7732128 7732207 + 116897488 MODEL JAAIVD010000012;XR_004387509 snorna 626068056 Sit1 signaling threshold regulating transmembrane adaptor 1 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN regulation of T cell activation (ortholog); FOUND IN plasma membrane (ortholog) 1 3011679 3013078 + 30032202 116885906 MODEL JAAIVD010000025;XM_032887224 XP_032743115 signaling threshold-regulating transmembrane adapter 1 protein-coding 626068065 Tbx4 T-box transcription factor 4 INVOLVED IN angiogenesis (ortholog); embryonic hindlimb morphogenesis (ortholog); embryonic limb morphogenesis (ortholog); ASSOCIATED WITH Amelia, Autosomal Recessive (ortholog); arthropathy (ortholog); genetic disease (ortholog) 9 84831094 84860534 - 22301074;30032202 116909212 MODEL JAAIVD010000002;XM_032912713;XM_032912714 XP_032768604;XP_032768605 T-box transcription factor TBX4 protein-coding 626068082 Serpina5 serpin family A member 5 ENCODES a protein that exhibits acrosin binding (ortholog); phosphatidylcholine binding (ortholog); protease binding (ortholog); INVOLVED IN negative regulation of proteolysis (ortholog); seminal clot liquefaction (ortholog); seminal vesicle development (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Arterial Occlusive Diseases (ortholog); cholestasis (ortholog); FOUND IN acrosomal membrane (ortholog); external side of plasma membrane (ortholog); extracellular exosome (ortholog) 7 115157909 115163114 + 30032202 116905876 MODEL JAAIVD010000026;XM_032908864;XM_032908865 XP_032764755;XP_032764756 plasma serine protease inhibitor protein-coding 626068095 LOC116887294 olfactory receptor 10C1-like 18 10664544 10665515 + 22301074 116887294 MODEL JAAIVD010000013;XM_032888874;XM_032888875 XP_032744765;XP_032744766 olfactory receptor 10A2-like protein-coding 626068102 LOC116892492 zinc finger protein 226-like 2 170438452 170446538 + 30032202 116892492 MODEL JAAIVD010000001;XM_032894229;XM_032894230 XP_032750120;XP_032750121 protein-coding 626068116 LOC116908979 mesothelin 9 3013485 3019108 - 30032202 116908979 MODEL JAAIVD010000002;XM_032912449 XP_032768340 protein-coding 626068136 LOC116895472 40S ribosomal protein S6-like 3 88616126 88616866 + 116895472 MODEL JAAIVD010000012 pseudo 626068137 Ccdc110 coiled-coil domain containing 110 ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 13 41948498 41961257 - 30032202 116914416 MODEL JAAIVD010000008;XM_032918677 XP_032774568 coiled-coil domain-containing protein 110 protein-coding 626068147 LOC116890294 U2 spliceosomal RNA 1 235207403 235207519 - 116890294 MODEL JAAIVD010000025 pseudo 626068148 LOC116896907 la-related protein 1B-like 3 112898515 112955535 - 22301074 116896907 MODEL JAAIVD010000012;XM_032898464;XM_032898465 XP_032754355;XP_032754356 protein-coding 626068162 Eif1 eukaryotic translation initiation factor 1 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN positive regulation of mRNA cis splicing, via spliceosome (ortholog); random inactivation of X chromosome (ortholog); regulation of translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytoplasm (ortholog); eukaryotic 43S preinitiation complex (ortholog); eukaryotic 48S preinitiation complex (ortholog) 9 59619257 59621568 + 22301074;30032202 116909585 MODEL JAAIVD010000002;XM_032913208 XP_032769099 protein-coding 626068170 Ift80 intraflagellar transport 80 INVOLVED IN apoptotic process (ortholog); articular cartilage development (ortholog); bone development (ortholog); ASSOCIATED WITH Asphyxia (ortholog); asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 2 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 86304297 86407342 + 22301074;30032202 116896797 MODEL JAAIVD010000012;XM_032898268 XP_032754159 intraflagellar transport protein 80 homolog protein-coding 626068194 LOC116889559 U2 spliceosomal RNA X 15362594 15362776 + 116889559 MODEL JAAIVD010000014;XR_004386483 snrna 626068197 Glra2 glycine receptor alpha 2 ENCODES a protein that exhibits extracellularly glycine-gated chloride channel activity (ortholog); glycine binding (ortholog); glycine-gated chloride ion channel activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to ethanol (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH genetic disease (ortholog); syndromic X-linked intellectual disability Pilorge type (ortholog); FOUND IN GABA-ergic synapse (ortholog); glycinergic synapse (ortholog); plasma membrane (ortholog) X 25914226 26134542 - 22301074;30032202 116888688 MODEL JAAIVD010000014;XM_032889979 XP_032745870 glycine receptor subunit alpha-2 protein-coding 626068211 Catsper2 cation channel sperm associated 2 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); fertilization (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Deafness-Infertility Syndrome (ortholog); infertility (ortholog); male infertility (ortholog); FOUND IN CatSper complex (ortholog); sperm flagellum (ortholog) 5 99547137 99567446 - 22301074;30032202 116901862 MODEL JAAIVD010000023;XM_032904060 XP_032759951 cation channel sperm-associated protein 2 protein-coding 626068228 LOC116914152 small nucleolar RNA SNORA26 12 67497810 67497928 + 116914152 MODEL JAAIVD010000007;XR_004389703 snorna 626068231 Amh anti-Mullerian hormone ENCODES a protein that exhibits signaling receptor binding (ortholog); transforming growth factor beta receptor binding (ortholog); type II transforming growth factor beta receptor binding (ortholog); INVOLVED IN anti-Mullerian hormone receptor signaling pathway (ortholog); Leydig cell differentiation (ortholog); Mullerian duct regression (ortholog); ASSOCIATED WITH breast cancer (ortholog); disorder of sexual development (ortholog); Female Urogenital Diseases (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 1 154077820 154080225 - 22301074;30032202 116904822 MODEL JAAIVD010000025;XM_032907450 XP_032763341 muellerian-inhibiting factor protein-coding 626068239 Nkx3-1 NK3 homeobox 1 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); branching involved in prostate gland morphogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 54929611 54932202 - 22301074;30032202 116913619 MODEL JAAIVD010000007;XM_032917872 XP_032773763 homeobox protein Nkx-3.1 protein-coding 626068245 LOC116887350 olfactory receptor 2B11-like 18 10992074 10993112 + 22301074 116887350 MODEL JAAIVD010000013;XM_032888944 XP_032744835 protein-coding 626068249 LOC116889443 U6 spliceosomal RNA X 86818860 86818962 + 116889443 MODEL JAAIVD010000014;XR_004386405 snrna 626068252 Defb109b defensin beta 109B 12 61387736 61395005 + 22301074;30032202 116913550 MODEL JAAIVD010000007;XM_032917756 XP_032773647 putative beta-defensin 109B protein-coding 626068256 Odf2l outer dense fiber of sperm tails 2 like INVOLVED IN negative regulation of cilium assembly (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 15712319 15748634 - 30032202 116896183 MODEL JAAIVD010000012;XM_032897222 XP_032753113 protein BCAP protein-coding 626068276 LOC116889545 U6atac minor spliceosomal RNA X 23979225 23979346 - 116889545 MODEL JAAIVD010000014;XR_004386480 snrna 626068279 LOC116908338 U6 spliceosomal RNA 8 38720307 38720369 + 116908338 MODEL JAAIVD010000027 pseudo 626068280 Fgf19 fibroblast growth factor 19 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); heart development (ortholog); negative regulation of bile acid biosynthetic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); colitis (ortholog); Hepatic Insufficiency (ortholog) 2 4835699 4838992 - 22301074;30032202 116893609 MODEL JAAIVD010000001;XM_032895316 XP_032751207 protein-coding 626068285 LOC116885065 small nucleolar RNA SNORA17 15 28035658 28035794 - 116885065 MODEL JAAIVD010000010;XR_004385941 snorna 626068288 LOC116900303 olfactory receptor 1094 5 63850131 63851123 + 22301074;30032202 116900303 MODEL JAAIVD010000023;XM_032902059 XP_032757950 protein-coding 626068291 LOC116895626 SNW domain-containing protein 1-like 3 172840177 172841767 - 116895626 MODEL JAAIVD010000012 pseudo 626068292 LOC116900121 chromobox protein homolog 3-like 5 14249181 14249662 + 116900121 MODEL JAAIVD010000023 pseudo 626068293 LOC116889482 small nucleolar RNA SNORA61 X 128549654 128549783 + 116889482 MODEL JAAIVD010000014;XR_004386433 snorna 626068296 LOC116893473 homeobox protein ceh-37-like 2 180329651 180331143 - 22301074;30032202 116893473 MODEL JAAIVD010000001;XM_032895230 XP_032751121 protein-coding 626068301 Psma2 proteasome 20S subunit alpha 2 INVOLVED IN response to virus (ortholog); ASSOCIATED WITH heart disease (ortholog); osteoporosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) 14 33484638 33495241 + 22301074;30032202 116883542 MODEL JAAIVD010000009;XM_032884714 XP_032740605 proteasome subunit alpha type-2 protein-coding 626068313 Col5a1 collagen type V alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); heparin binding (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN blood vessel development (ortholog); cell adhesion (ortholog); cell migration (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); aortic aneurysm (ortholog); aortic valve disease 1 (ortholog); FOUND IN basement membrane (ortholog); collagen trimer (ortholog); collagen type V trimer (ortholog) 5 8628708 8779173 - 22301074 116901234 MODEL JAAIVD010000023;XM_032902979;XM_032902980 XP_032758870;XP_032758871 collagen alpha-1(V) chain protein-coding 626068385 LOC116913899 selenoprotein K-like 12 23722782 23723110 - 116913899 MODEL JAAIVD010000007 pseudo 626068386 Camkv CaM kinase like vesicle associated ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of modification of postsynaptic structure (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 8 99268387 99282770 + 22301074;30032202 116907558 MODEL JAAIVD010000027;XM_032910581 XP_032766472 caM kinase-like vesicle-associated protein protein-coding 626068401 Dnajc13 DnaJ heat shock protein family (Hsp40) member C13 INVOLVED IN endosome organization (ortholog); regulation of early endosome to late endosome transport (ortholog); regulation of early endosome to recycling endosome transport (ortholog); PARTICIPATES IN altered retromer-mediated pathway; Parkinson's disease pathway; retromer-mediated pathway; ASSOCIATED WITH essential tremor (ortholog); late onset Parkinson's disease (ortholog); Parkinson's disease (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endosome membrane (ortholog) 8 95467055 95574494 - 30032202 116907427 MODEL JAAIVD010000027;XM_032910394;XM_032910395 XP_032766285;XP_032766286 dnaJ homolog subfamily C member 13 protein-coding 626068465 Cyfip2 cytoplasmic FMR1 interacting protein 2 INVOLVED IN apoptotic process (ortholog); cell-cell adhesion (ortholog); dendrite extension (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH developmental and epileptic encephalopathy 65 (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog); SCAR complex (ortholog) 9 28908430 29009294 - 22301074;30032202 116910026 MODEL JAAIVD010000002;XM_032913809 XP_032769700 cytoplasmic FMR1-interacting protein 2 protein-coding 626068501 Tbc1d32 TBC1 domain family member 32 INVOLVED IN camera-type eye development (ortholog); cilium assembly (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); ciliopathy (ortholog); genetic disease (ortholog) 18 32827556 33035087 - 30032202 116886874 MODEL JAAIVD010000013;XM_032888330 XP_032744221 protein broad-minded protein-coding 626068538 LOC116893384 cold shock domain-containing protein E1-like 2 168197327 168199731 + 116893384 MODEL JAAIVD010000001 pseudo 626068539 Mylip myosin regulatory light chain interacting protein ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); negative regulation of low-density lipoprotein particle clearance (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); endometriosis (ortholog) 14 64380071 64401941 + 22301074;30032202 116883441 MODEL JAAIVD010000009;XM_032884585 XP_032740476 E3 ubiquitin-protein ligase MYLIP protein-coding 626068550 LOC116909466 uncharacterized LOC116909466 9 67403015 67412469 - 116909466 MODEL JAAIVD010000002;XR_004389075 ncrna 626068555 LOC116897887 multifunctional protein ADE2-like 4 30029894 30031315 - 116897887 MODEL JAAIVD010000003 pseudo 626068556 Slc45a3 solute carrier family 45 member 3 ENCODES a protein that exhibits sucrose:proton symporter activity (ortholog); INVOLVED IN positive regulation of fatty acid biosynthetic process (ortholog); positive regulation of glucose metabolic process (ortholog); regulation of oligodendrocyte differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); teratoma (ortholog) 10 3858068 3867039 - 22301074;30032202 116911431 MODEL JAAIVD010000005;XM_032915400 XP_032771291 protein-coding 626068565 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 232303157 232303229 - 116890650 MODEL JAAIVD010000025 trna 626068566 LOC116889655 ribonuclease J-like 116889655 MODEL JAAIVD010000045;XM_032890560 XP_032746451 protein-coding 626068567 LOC116888772 pyruvate kinase PKM-like X 49960580 49962165 - 116888772 MODEL JAAIVD010000014 pseudo 626068568 Yeats4 YEATS domain containing 4 ENCODES a protein that exhibits histone H3K18ac reader activity (ortholog); histone H3K27ac reader activity (ortholog); INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH high grade glioma (ortholog); liposarcoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 1 195362113 195369689 - 22301074;30032202 116909241 MODEL JAAIVD010000025;XM_032912749 XP_032768640 YEATS domain-containing protein 4 protein-coding 626068579 LOC116914149 small nucleolar RNA SNORA17 12 31799677 31799776 + 116914149 MODEL JAAIVD010000007 pseudo 626068580 Qser1 glutamine and serine rich 1 5 82665921 82709027 - 116901707 MODEL JAAIVD010000023;XM_032903837;XM_032903838 XP_032759728;XP_032759729 glutamine and serine-rich protein 1 protein-coding 626068598 Peli3 pellino E3 ubiquitin protein ligase family member 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of extrinsic apoptotic signaling pathway (ortholog); negative regulation of protein ubiquitination (ortholog); PARTICIPATES IN interleukin-1 signaling pathway 2 2714190 2724909 + 22301074;30032202 116890751 MODEL JAAIVD010000001;XM_032891207 XP_032747098 E3 ubiquitin-protein ligase pellino homolog 3 protein-coding 626068609 LOC116888171 small integral membrane protein 10-like protein 2A X 116982720 116987025 + 116888171 MODEL JAAIVD010000014 pseudo 626068610 Klrg1 killer cell lectin like receptor G1 ENCODES a protein that exhibits carbohydrate binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 6 24823233 24834106 + 116904605 MODEL JAAIVD010000024;XM_032907401 XP_032763292 killer cell lectin-like receptor subfamily G member 1 protein-coding 626068617 LOC116883561 histone H3-like 14 42579256 42583778 - 22301074;30032202 116883561 MODEL JAAIVD010000009;XM_032884742;XR_004385772 XP_032740633 protein-coding 626068627 Mrps21 mitochondrial ribosomal protein S21 FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 3 61418242 61425347 + 22301074;30032202 116896535 MODEL JAAIVD010000012;XM_032897720 XP_032753611 28S ribosomal protein S21, mitochondrial protein-coding 626068634 LOC116892762 olfactory receptor 10A3-like 2 182638013 182638948 + 22301074 116892762 MODEL JAAIVD010000001;XM_032894640 XP_032750531 protein-coding 626068637 Ankrd33 ankyrin repeat domain 33 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 1 261977875 261980449 - 22301074;30032202 116890217 MODEL JAAIVD010000025;XM_032890953;XM_032890954 XP_032746844;XP_032746845 photoreceptor ankyrin repeat protein protein-coding 626068648 Nbr1 NBR1 autophagy cargo receptor ENCODES a protein that exhibits mitogen-activated protein kinase binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN macroautophagy (ortholog); negative regulation of osteoblast differentiation (ortholog); regulation of bone mineralization (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); late endosome (ortholog) 9 60835552 60863589 + 22301074;30032202 116910550 MODEL JAAIVD010000002;XM_032914457;XM_032914458 XP_032770348;XP_032770349 next to BRCA1 gene 1 protein protein-coding 626068678 Rab7b RAB7B, member RAS oncogene family INVOLVED IN cellular response to type II interferon (ortholog); late endosome to Golgi transport (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); osteoporosis (ortholog); FOUND IN Golgi apparatus (ortholog); late endosome (ortholog); lysosome (ortholog) 10 4130095 4156515 - 22301074;30032202 116911651 MODEL JAAIVD010000005;XM_032915605;XM_032915606;XM_032915607 XP_032771496;XP_032771497;XP_032771498 ras-related protein Rab-7b protein-coding 626068696 LOC116909343 V-type proton ATPase subunit G 1-like 9 26840105 26840449 - 116909343 MODEL JAAIVD010000002 pseudo 626068697 LOC116888228 melanoma-associated antigen B3-like X 129741875 129742896 - 116888228 MODEL JAAIVD010000014 pseudo 626068698 LOC116905535 60S ribosomal protein L21-like 7 8228946 8229425 - 22301074;30032202 116905535 MODEL JAAIVD010000026;XM_032908573 XP_032764464 protein-coding 626068701 Cflar CASP8 and FADD like apoptosis regulator ENCODES a protein that exhibits death receptor binding (ortholog); enzyme activator activity (ortholog); peptidase activator activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to epidermal growth factor stimulus (ortholog); PARTICIPATES IN FasL mediated signaling pathway; Trail mediated signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Carotid Artery Injuries (ortholog); congestive heart failure (ortholog); FOUND IN CD95 death-inducing signaling complex (ortholog); cytoplasm (ortholog); death-inducing signaling complex (ortholog) 4 133705160 133753373 - 22301074;30032202 116899423 MODEL JAAIVD010000003;XM_032901163;XM_032901164;XM_032901165;XM_032901166 XP_032757054;XP_032757055;XP_032757056;XP_032757057 CASP8 and FADD-like apoptosis regulator protein-coding 626068728 Hgfac HGF activator ASSOCIATED WITH Crohn's disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); rough endoplasmic reticulum (ortholog) 11 70036719 70043367 - 22301074;30032202 116912734 MODEL JAAIVD010000006;XM_032916876 XP_032772767 hepatocyte growth factor activator protein-coding 626068746 Otof otoferlin ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); calcium ion binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cochlea development (ortholog); synaptic vesicle exocytosis (ortholog); synaptic vesicle priming (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH Arthrogryposis and Ectodermal Dysplasia (ortholog); Auditory Neuropathy (ortholog); autosomal recessive nonsyndromic deafness (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cochlear hair cell ribbon synapse (ortholog) 7 23620737 23716522 + 30032202 116906007 MODEL JAAIVD010000026;XM_032909046;XM_032909047 XP_032764937;XP_032764938 protein-coding 626068798 LOC116886274 60S ribosomal protein L28-like 17 46772518 46772909 - 116886274 MODEL JAAIVD010000011 pseudo 626068799 LOC116906115 uncharacterized LOC116906115 7 82564207 82595483 + 116906115 MODEL JAAIVD010000026 pseudo 626068800 Dynlt2b dynein light chain Tctex-type 2B ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium assembly (ortholog); intraciliary retrograde transport (ortholog); regulation of cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); Short-Rib Thoracic Dysplasia 17 with or without Polydactyly (ortholog); FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary base (ortholog) 4 17231515 17240024 + 30032202 116898774 MODEL JAAIVD010000003;XM_032900110;XM_032900111 XP_032756001;XP_032756002 Tctex1d2 Tctex1 domain containing 2;tctex1 domain-containing protein 2 protein-coding 626068811 LOC116890585 small nucleolar RNA SNORA17 1 181513651 181513770 + 116890585 MODEL JAAIVD010000025 pseudo 626068812 LOC116910178 40S ribosomal protein S20-like 9 61854615 61854981 + 116910178 MODEL JAAIVD010000002 pseudo 626068813 Pdss1 decaprenyl diphosphate synthase subunit 1 ENCODES a protein that exhibits all-trans-decaprenyl-diphosphate synthase activity (ortholog); all-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate specific) activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN isoprenoid biosynthetic process (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH coenzyme Q10 deficiency disease (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN heterotetrameric polyprenyl diphosphate synthase complex (ortholog); mitochondrion (ortholog); transferase complex (ortholog) 14 1625889 1664539 - 22301074;30032202 116883320 MODEL JAAIVD010000009;XM_032884385;XM_032884386;XM_032884387 XP_032740276;XP_032740277;XP_032740278 decaprenyl-diphosphate synthase subunit 1 protein-coding 626068834 LOC116911525 olfactory receptor 10J3-like 10 52263373 52264314 + 22301074 116911525 MODEL JAAIVD010000005;XM_032915518 XP_032771409 protein-coding 626068837 Mmrn1 multimerin 1 INVOLVED IN cell adhesion mediated by integrin (ortholog); negative regulation of wound healing (ortholog); positive regulation of platelet aggregation (ortholog); FOUND IN extracellular region (ortholog); multimerin complex (ortholog); platelet alpha granule (ortholog) 6 81785858 81833605 - 22301074;30032202 116902794 MODEL JAAIVD010000024;XM_032905131;XM_032905132 XP_032761022;XP_032761023 multimerin-1 protein-coding 626068851 LOC116897019 cytochrome P450 2C55-like 3 141333705 141371724 - 22301074;30032202 116897019 MODEL JAAIVD010000012;XM_032898626;XM_032898627 XP_032754517;XP_032754518 protein-coding 626068868 Zc3h15 zinc finger CCCH-type containing 15 INVOLVED IN cytokine-mediated signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); FOUND IN cytosol (ortholog) 5 61121380 61140760 + 22301074;30032202 116901575 MODEL JAAIVD010000023;XM_032903572 XP_032759463 zinc finger CCCH domain-containing protein 15 protein-coding 626068882 LOC116889398 uncharacterized LOC116889398 1 134900874 134902254 - 116889398 MODEL JAAIVD010000025;XR_004386379 ncrna 626068887 Rbmxl2 RBMX like 2 2 105343282 105344687 + 22301074;30032202 116894177 MODEL JAAIVD010000001;XM_032895894 XP_032751785 RNA-binding motif protein, X-linked-like-2 protein-coding 626068891 Rp1l1 RP1 like 1 INVOLVED IN photoreceptor cell development (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); photoreceptor connecting cilium (ortholog); photoreceptor outer segment (ortholog) 12 60373043 60383523 - 22301074;30032202 116913778 MODEL JAAIVD010000007;XM_032918084 XP_032773975 retinitis pigmentosa 1-like 1 protein protein-coding 626068896 LOC116900947 olfactory receptor 4F4-like 5 89827616 89829889 + 22301074 116900947 MODEL JAAIVD010000023;XM_032902588 XP_032758479 protein-coding 626068900 Snx13 sorting nexin 13 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN intracellular protein transport (ortholog); positive regulation of GTPase activity (ortholog); PARTICIPATES IN epinephrine signaling pathway via adrenergic receptor beta; G protein mediated signaling pathway via Galphas family; FOUND IN early endosome (ortholog) 7 48334412 48437425 + 22301074;30032202 116904969 MODEL JAAIVD010000026;XM_032907648 XP_032763539 sorting nexin-13 protein-coding 626068930 Slco4a1 solute carrier organic anion transporter family member 4A1 ENCODES a protein that exhibits organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); thyroid hormone transmembrane transporter activity (ortholog); INVOLVED IN thyroid hormone metabolic process (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH COVID-19 (ortholog) 5 157546078 157565087 + 22301074;30032202 116902410 MODEL JAAIVD010000023;XM_032904940 XP_032760831 protein-coding 626068946 Polr1f RNA polymerase I subunit F INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; FOUND IN RNA polymerase I complex (ortholog) 7 46780417 46795708 + 22301074;30032202 116904967 MODEL JAAIVD010000026;XM_032907638 XP_032763529 Twistnb DNA-directed RNA polymerase I subunit RPA43;TWIST neighbor protein-coding 626068954 LOC116889005 histone deacetylase 6-like X 14198795 14205108 + 22301074;30032202 116889005 MODEL JAAIVD010000014;XM_032890215 XP_032746106 protein-coding 626068967 LOC116902458 5S ribosomal RNA 5 154928026 154928143 - 116902458 MODEL JAAIVD010000023 pseudo 626068968 Brsk1 BR serine/threonine kinase 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); magnesium ion binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN associative learning (ortholog); axonogenesis (ortholog); central nervous system neuron differentiation (ortholog); FOUND IN cell junction (ortholog); centrosome (ortholog); cholinergic synapse (ortholog) 2 177265297 177291818 + 22301074;30032202 116892663 MODEL JAAIVD010000001;XM_032894486 XP_032750377 serine/threonine-protein kinase BRSK1 protein-coding 626068991 LOC116914196 U7 small nuclear RNA 12 67973679 67973740 + 116914196 MODEL JAAIVD010000007;XR_004389731 snrna 626068994 Dnm3 dynamin 3 ENCODES a protein that exhibits GTPase activity (ortholog); identical protein binding (ortholog); nitric-oxide synthase binding (ortholog); INVOLVED IN endocytosis (ortholog); filopodium assembly (ortholog); negative regulation of dendritic spine morphogenesis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Kidney Neoplasms (ortholog); FOUND IN apical tubulobulbar complex (ortholog); axon (ortholog); basal tubulobulbar complex (ortholog) 10 41293515 41758624 - 22301074;30032202 116911058 MODEL JAAIVD010000005;XM_032914813;XM_032914814;XM_032914815;XM_032914816 XP_032770704;XP_032770705;XP_032770706;XP_032770707 dynamin-3 protein-coding 626069026 Osbpl8 oxysterol binding protein like 8 ENCODES a protein that exhibits cholesterol binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); negative regulation of cell migration (ortholog); phospholipid transport (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); endoplasmic reticulum (ortholog); nuclear membrane (ortholog) 1 189309249 189468266 + 30032202 116908863 MODEL JAAIVD010000025;XM_032912307;XM_032912315 XP_032768198;XP_032768206 oxysterol-binding protein-related protein 8 protein-coding 626069057 C2H6orf58 chromosome 2 C6orf58 homolog FOUND IN extracellular space (ortholog) 2 203864356 203881606 - 30032202 116893543 MODEL JAAIVD010000001;XM_032895262 XP_032751153 protein LEG1 homolog protein-coding 626069066 Mdfic MyoD family inhibitor domain containing ENCODES a protein that exhibits cyclin binding (ortholog); DNA-binding transcription factor binding (ortholog); Tat protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of protein import into nucleus (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH central conducting lymphatic anomaly (ortholog); genetic disease (ortholog); Lymphatic Malformation 12 (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 6 123156954 123235516 - 116904064 MODEL JAAIVD010000024;XM_032906926;XM_032906927 XP_032762817;XP_032762818 myoD family inhibitor domain-containing protein protein-coding 626069076 LOC116909233 uncharacterized LOC116909233 9 62027494 62037446 - 116909233 MODEL JAAIVD010000002;XR_004389059 ncrna 626069080 Axdnd1 axonemal dynein light chain domain containing 1 INVOLVED IN manchette assembly (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH male infertility (ortholog); spermatogenic failure 3 (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytoplasm (ortholog) 10 35705956 35778526 - 116911644 MODEL JAAIVD010000005;XM_032915601 XP_032771492 axonemal dynein light chain domain-containing protein 1 protein-coding 626069108 LOC116914007 leucine-rich repeat and IQ domain-containing protein 1-like 1 181606282 181768442 - 22301074 116914007 MODEL JAAIVD010000025;XM_032918311 XP_032774202 protein-coding 626069119 Hectd3 HECT domain E3 ubiquitin protein ligase 3 ENCODES a protein that exhibits syntaxin binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 1 40626510 40634871 + 22301074;30032202 116898565 MODEL JAAIVD010000025;XM_032899775;XR_004387651 XP_032755666 E3 ubiquitin-protein ligase HECTD3 protein-coding 626069147 Ramp2 receptor activity modifying protein 2 ENCODES a protein that exhibits adrenomedullin binding (ortholog); adrenomedullin receptor activity (ortholog); coreceptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adherens junction assembly (ortholog); adrenomedullin receptor signaling pathway (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); adult respiratory distress syndrome (ortholog); Cardiomegaly (ortholog); FOUND IN adrenomedullin receptor complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 9 60550972 60553146 + 22301074;30032202 116910125 MODEL JAAIVD010000002;XM_032913959 XP_032769850 receptor activity-modifying protein 2 protein-coding 626069155 LOC116894868 U6 spliceosomal RNA 2 44445273 44445379 + 116894868 MODEL JAAIVD010000001;XR_004387081 snrna 626069158 Smg1 SMG1 nonsense mediated mRNA decay associated PI3K related kinase ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); telomeric DNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); peptidyl-serine phosphorylation (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 83404018 83508666 + 22301074;30032202 116891613 MODEL JAAIVD010000001;XM_032892819;XM_032892820;XM_032892821 XP_032748710;XP_032748711;XP_032748712 serine/threonine-protein kinase SMG1 protein-coding 626069233 LOC116914359 small ubiquitin-related modifier 2-like 13 70207948 70208338 + 116914359 MODEL JAAIVD010000008 pseudo 626069234 LOC116912199 uncharacterized LOC116912199 11 18147366 18149297 + 116912199 MODEL JAAIVD010000006;XR_004389430;XR_004389431;XR_004389432 ncrna 626069243 LOC116905783 uncharacterized LOC116905783 7 89779142 89781426 - 116905783 MODEL JAAIVD010000026;XR_004388566 ncrna 626069248 LOC116908456 U6 spliceosomal RNA 8 26221818 26221924 + 116908456 MODEL JAAIVD010000027;XR_004388974 snrna 626069251 Qrfpr pyroglutamylated RFamide peptide receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH bone structure disease (ortholog); FOUND IN non-motile cilium (ortholog) 3 117744059 117786850 + 22301074;30032202 116896932 MODEL JAAIVD010000012;XM_032898500 XP_032754391 pyroglutamylated RF-amide peptide receptor protein-coding 626069260 Cwc22 CWC22 spliceosome associated protein homolog ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nuclear speck (ortholog) 5 55225460 55275166 - 22301074;30032202 116901555 MODEL JAAIVD010000023;XM_032903551 XP_032759442 pre-mRNA-splicing factor CWC22 homolog protein-coding 626069284 Kdm1a lysine demethylase 1A ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to cAMP (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN histone modification pathway; Notch signaling pathway; ASSOCIATED WITH ACTH-independent Macronodular Adrenal Hyperplasia 3 (ortholog); alopecia areata (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); DNA repair complex (ortholog) 1 21632018 21686694 + 22301074;30032202 116894258 MODEL JAAIVD010000025;XM_032895966;XM_032895974;XM_032895983;XM_032895989 XP_032751857;XP_032751865;XP_032751874;XP_032751880 lysine-specific histone demethylase 1A protein-coding 626069316 LOC116900512 homeobox protein Rhox5-like 5 78409383 78410186 - 116900512 MODEL JAAIVD010000023 pseudo 626069317 LOC116907469 glyceraldehyde-3-phosphate dehydrogenase-like 8 20377099 20378204 + 22301074;30032202 116907469 MODEL JAAIVD010000027;XM_032910454 XP_032766345 protein-coding 626069323 LOC116890310 U4 spliceosomal RNA 1 55509413 55509576 + 116890310 MODEL JAAIVD010000025 pseudo 626069324 LOC116888347 uncharacterized LOC116888347 X 13515352 13516781 - 116888347 MODEL JAAIVD010000014;XR_004386304 ncrna 626069329 LOC116895267 cornifin-B 3 1635914 1636303 + 116895267 MODEL JAAIVD010000012;XM_032896585;XM_032896586 XP_032752476;XP_032752477 protein-coding 626069335 LOC116896376 glutathione S-transferase Mu 3 3 50288019 50293314 + 22301074;30032202 116896376 MODEL JAAIVD010000012;XM_032897499 XP_032753390 protein-coding 626069347 Lrtm2 leucine rich repeat transmembrane protein 2 INVOLVED IN positive regulation of synapse assembly (ortholog) 6 27430393 27438409 + 22301074;30032202 116903344 MODEL JAAIVD010000024;XM_032905802 XP_032761693 leucine rich repeats and transmembrane domains 2;leucine-rich repeat and transmembrane domain-containing protein 2 protein-coding 626069355 LOC116887069 popy Class I histocompatibility antigen, A-1 alpha chain-like 18 9984762 9987024 - 30032202 116887069 MODEL JAAIVD010000013;XM_032888570;XM_032888571 XP_032744461;XP_032744462 protein-coding 626069365 Phf21a PHD finger protein 21A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); suckling behavior (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Intellectual Developmental Disorder with Behavioral Abnormalities and Craniofacial Dysmorphism with or without Seizures (ortholog); FOUND IN DNA repair complex (ortholog); histone deacetylase complex (ortholog); male germ cell nucleus (ortholog) 5 66326337 66499632 + 30032202 116901638 MODEL JAAIVD010000023;XM_032903727 XP_032759618 protein-coding 626069388 LOC116889973 high mobility group protein B3-like 1 166396923 166397519 - 116889973 MODEL JAAIVD010000025 pseudo 626069389 Cd160 CD160 molecule ENCODES a protein that exhibits activating MHC class I receptor activity (ortholog); kinase binding (ortholog); MHC class I protein complex binding (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); mucosal immune response (ortholog); negative regulation of adaptive immune memory response (ortholog); FOUND IN plasma membrane (ortholog) 3 60487240 60505530 + 30032202 116896496 MODEL JAAIVD010000012;XM_032897672 XP_032753563 CD160 antigen protein-coding 626069398 LOC116914113 small nucleolar RNA SNORA48 12 52544677 52544822 - 116914113 MODEL JAAIVD010000007;XR_004389678 snorna 626069401 LOC116883618 ubiquinone biosynthesis protein COQ4 homolog, mitochondrial-like 1 205567089 205567673 - 116883618 MODEL JAAIVD010000025 pseudo 626069402 Mpig6b megakaryocyte and platelet inhibitory receptor G6b INVOLVED IN blood coagulation (ortholog); erythrocyte differentiation (ortholog); integrin-mediated signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Thrombocytopenia, Anemia, and Myelofibrosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 18 7661700 7663765 - 30032202 116887520 MODEL JAAIVD010000013;XM_032889144;XM_032889145 XP_032745035;XP_032745036 protein-coding 626069413 Sec31a SEC31 homolog A, COPII component ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); response to calcium ion (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); Halperin-Birk syndrome (ortholog); FOUND IN COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasm (ortholog) 11 10576881 10633537 - 22301074;30032202 116912173 MODEL JAAIVD010000006;XM_032916100;XM_032916101;XM_032916102;XM_032916103;XM_032916104 XP_032771991;XP_032771992;XP_032771993;XP_032771994;XP_032771995 SEC31 homolog A, COPII coat complex component;protein transport protein Sec31A protein-coding 626069453 Hcfc1r1 host cell factor C1 regulator 1 FOUND IN nucleoplasm (ortholog) 9 980578 982202 + 116908952 MODEL JAAIVD010000002;XM_032912412 XP_032768303 protein-coding 626069461 LOC116911081 60S ribosomal protein L35-like 10 59394558 59394949 - 116911081 MODEL JAAIVD010000005 pseudo 626069462 LOC116903315 ubiquitin-conjugating enzyme E2 C-like 1 137028579 137029603 - 116903315 MODEL JAAIVD010000025 pseudo 626069463 LOC116912948 small nucleolar RNA SNORA66 11 17706349 17706480 + 116912948 MODEL JAAIVD010000006;XR_004389516 snorna 626069466 LOC116899804 small nucleolar RNA SNORA75 4 158486907 158487041 - 116899804 MODEL JAAIVD010000003;XR_004387806 snorna 626069469 LOC116901468 histone deacetylase 1-like 5 44040688 44044186 - 116901468 MODEL JAAIVD010000023 pseudo 626069470 Mef2c myocyte enhancer factor 2C ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); axon guidance (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 3 212020968 212165328 - 22301074;30032202 116897325 MODEL JAAIVD010000012;XM_032899078;XM_032899079 XP_032754969;XP_032754970 myocyte-specific enhancer factor 2C protein-coding 626069490 LOC116899771 U6 spliceosomal RNA 4 54301023 54301127 - 116899771 MODEL JAAIVD010000003;XR_004387784 snrna 626069493 LOC116887873 uncharacterized LOC116887873 X 47773132 47776021 + 116887873 MODEL JAAIVD010000014 pseudo 626069494 Grip2 glutamate receptor interacting protein 2 ENCODES a protein that exhibits glutamate receptor binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); Notch signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 6 55133394 55182231 + 22301074;30032202 116903496 MODEL JAAIVD010000024;XM_032906087;XM_032906088;XM_032906089 XP_032761978;XP_032761979;XP_032761980 glutamate receptor-interacting protein 2 protein-coding 626069530 Hs3st6 heparan sulfate-glucosamine 3-sulfotransferase 6 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Hereditary Angioedema 8 (ortholog); pneumoconiosis (ortholog) 9 2041313 2047443 + 30032202 116909676 MODEL JAAIVD010000002;XM_032913333;XM_032913334 XP_032769224;XP_032769225 heparan sulfate glucosamine 3-O-sulfotransferase 6 protein-coding 626069538 Arv1 ARV1 fatty acid homeostasis modulator ENCODES a protein that exhibits cholesterol transfer activity (ortholog); INVOLVED IN bile acid metabolic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); ASSOCIATED WITH blindness (ortholog); developmental and epileptic encephalopathy 38 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 17 44246012 44257305 + 22301074;30032202 116886352 MODEL JAAIVD010000011;XM_032887804;XM_032887805 XP_032743695;XP_032743696 ARV1 homolog, fatty acid homeostasis modulator;protein ARV1 protein-coding 626069552 Ubtf upstream binding transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase I cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase I core promoter sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of transcription by RNA polymerase I (ortholog); rDNA heterochromatin formation (ortholog); PARTICIPATES IN cisplatin drug pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH Cardiomegaly (ortholog); childhood-onset neurodegeneration with brain atrophy (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleus (ortholog) 9 61600070 61613726 - 116908755 MODEL JAAIVD010000002;XM_032912105;XR_004389019;XR_004389020;XR_004389021;XR_004389022 XP_032767996 nucleolar transcription factor 1 protein-coding 626069584 Mdfic2 MyoD family inhibitor domain containing 2 6 48720887 48825828 + 116902711 MODEL JAAIVD010000024;XM_032905066;XM_032905067 XP_032760957;XP_032760958 myoD family inhibitor domain-containing protein 2 protein-coding 626069594 LOC116905217 ornithine decarboxylase-like 7 94622490 94623495 - 116905217 MODEL JAAIVD010000026 pseudo 626069595 LOC116888270 60S ribosomal protein L13-like X 127604843 127605747 + 116888270 MODEL JAAIVD010000014 pseudo 626069596 LOC116915193 small nucleolar RNA SNORA15 13 15367752 15367878 + 116915193 MODEL JAAIVD010000008;XR_004389849 snorna 626069599 LOC116889569 U6 spliceosomal RNA X 127421532 127421638 + 116889569 MODEL JAAIVD010000014;XR_004386486 snrna 626069602 Smim34 small integral membrane protein 34 4 52294333 52294924 + 116898349 MODEL JAAIVD010000003;XM_032899668 XP_032755559 Smim34a small integral membrane protein 34A protein-coding 626069606 Gen1 GEN1 Holliday junction 5' flap endonuclease ENCODES a protein that exhibits 5'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); four-way junction DNA binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); positive regulation of mitotic cell cycle spindle assembly checkpoint (ortholog); regulation of centrosome duplication (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Hereditary Neoplastic Syndromes (ortholog); prostate cancer (ortholog); FOUND IN centrosome (ortholog) 7 31220343 31245306 - 30032202 116904878 MODEL JAAIVD010000026;XM_032907477 XP_032763368 flap endonuclease GEN homolog 1 protein-coding 626069623 LOC116910893 heat shock protein HSP 90-alpha-like 10 42180231 42182450 - 22301074;30032202 116910893 MODEL JAAIVD010000005;XM_032914662 XP_032770553 protein-coding 626069629 LOC116884799 ubiquitin-conjugating enzyme E2 variant 1-like 15 25826646 25827076 - 116884799 MODEL JAAIVD010000010 pseudo 626069630 LOC116899815 small nucleolar RNA SNORD51 4 137166753 137166830 + 116899815 MODEL JAAIVD010000003;XR_004387815 snorna 626069633 LOC116887495 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9277047 9280996 - 30032202 116887495 MODEL JAAIVD010000013;XM_032889117 XP_032745008 protein-coding 626069645 LOC116902583 small nucleolar RNA SNORA17 5 85911513 85911642 - 116902583 MODEL JAAIVD010000023;XR_004388175 snorna 626069648 LOC116893228 calcium-independent phospholipase A2-gamma-like 2 115584787 115604218 - 116893228 MODEL JAAIVD010000001 pseudo 626069649 Mettl2a methyltransferase 2A, tRNA N3-cytidine ENCODES a protein that exhibits tRNA (cytidine-3-)-methyltransferase activity (ortholog); INVOLVED IN tRNA metabolic process (ortholog); tRNA methylation (ortholog); tRNA modification (ortholog); FOUND IN cytoplasm (ortholog) 9 73958081 73979724 - 30032202 116909776 MODEL JAAIVD010000002;XM_032913468 XP_032769359 methyltransferase 2A, methylcytidine;methyltransferase like 2A;tRNA N(3)-methylcytidine methyltransferase METTL2A protein-coding 626069662 Idi2 isopentenyl-diphosphate delta isomerase 2 ENCODES a protein that exhibits isopentenyl-diphosphate delta-isomerase activity (ortholog); INVOLVED IN isopentenyl diphosphate metabolic process (ortholog); isoprenoid biosynthetic process (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); FOUND IN peroxisome (ortholog) 14 22615362 22620542 + 22301074;30032202 116883885 MODEL JAAIVD010000009;XM_032885152 XP_032741043 isopentenyl-diphosphate delta-isomerase 2 protein-coding 626069668 LOC116890114 glycerol-3-phosphate dehydrogenase 1-like protein 1 234877762 234878817 - 22301074;30032202 116890114 MODEL JAAIVD010000025;XM_032890856 XP_032746747 protein-coding 626069671 LOC116895496 rho GTPase-activating protein 20-like 3 104779624 104973107 - 22301074;30032202 116895496 MODEL JAAIVD010000012;XM_032896751 XP_032752642 protein-coding 626069694 LOC116892095 L-lactate dehydrogenase A chain 2 152516461 152525971 - 22301074 116892095 MODEL JAAIVD010000001;XM_032893571 XP_032749462 protein-coding 626069706 LOC116889052 ubiquitin-conjugating enzyme E2 L3-like X 21701871 21719863 - 116889052 MODEL JAAIVD010000014 pseudo 626069707 LOC116883851 olfactory receptor 2W1 14 41308904 41309857 + 22301074 116883851 MODEL JAAIVD010000009;XM_032885115 XP_032741006 protein-coding 626069710 Ado 2-aminoethanethiol dioxygenase ENCODES a protein that exhibits cysteamine dioxygenase activity (ortholog); iron ion binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); PARTICIPATES IN taurine and hypotaurine metabolic pathway; FOUND IN mitochondrion (ortholog) 18 19283241 19284746 + 22301074;30032202 116887150 MODEL JAAIVD010000013;XM_032888697 XP_032744588 protein-coding 626069715 LOC116898332 developmental pluripotency-associated protein 2-like 4 43006853 43007527 - 116898332 MODEL JAAIVD010000003 pseudo 626069716 Gprc5b G protein-coupled receptor class C group 5 member B ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); glucose homeostasis (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH Megalencephalic Leukoencephalopathy with Subcortical Cysts 3 (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular exosome (ortholog) 2 82646657 82670699 + 22301074;30032202 116891602 MODEL JAAIVD010000001;XM_032892796;XM_032892797 XP_032748687;XP_032748688 G-protein coupled receptor family C group 5 member B protein-coding 626069727 Col4a2 collagen type IV alpha 2 chain ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); DNA-templated transcription (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); brain small vessel disease 2 (ortholog); Cerebral Hemorrhage (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) 13 72409913 72545210 - 22301074;30032202 116914226 MODEL JAAIVD010000008;XM_032918421 XP_032774312 collagen alpha-2(IV) chain protein-coding 626069779 Pax2 paired box 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN brain morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); camera-type eye development (ortholog); ASSOCIATED WITH CAKUT (ortholog); CAKUT1 (ortholog); chronic kidney disease (ortholog); FOUND IN centriolar satellite (ortholog); microtubule organizing center (ortholog); nucleoplasm (ortholog) 2 44263882 44342438 + 30032202 116893806 MODEL JAAIVD010000001;XM_032895509;XM_032895510;XM_032895511;XM_032895512;XM_032895513;XM_032895514;XM_032895515;XM_032895516;XM_032895517 XP_032751400;XP_032751401;XP_032751402;XP_032751403;XP_032751404;XP_032751405;XP_032751406;XP_032751407;XP_032751408 paired box protein Pax-2 protein-coding 626069808 Sytl1 synaptotagmin like 1 ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN exocytosis (ortholog); vesicle-mediated transport (ortholog); FOUND IN melanosome (ortholog); membrane (ortholog); plasma membrane (ortholog) 1 24993396 25001436 + 22301074;30032202 116895252 MODEL JAAIVD010000025;XM_032896574 XP_032752465 synaptotagmin-like protein 1 protein-coding 626069826 LOC116888988 structural maintenance of chromosomes protein 1A-like X 12704305 12734157 - 22301074;30032202 116888988 MODEL JAAIVD010000014;XM_032890206 XP_032746097 protein-coding 626069848 LOC116898211 gamma-crystallin F 4 140939230 140941141 - 30032202 116898211 MODEL JAAIVD010000003;XM_032899571;XM_032899572 XP_032755462;XP_032755463 protein-coding 626069858 LOC116907435 C-C chemokine receptor type 3 8 115086953 115096736 + 22301074;30032202 116907435 MODEL JAAIVD010000027;XM_032910405 XP_032766296 protein-coding 626069864 LOC116909508 olfactory receptor 6C6-like 1 160294534 160295484 - 116909508 MODEL JAAIVD010000025 pseudo 626069865 LOC116887978 uncharacterized LOC116887978 X 68856315 69033450 - 116887978 MODEL JAAIVD010000014;XM_032889416 XP_032745307 uncharacterized protein LOC116887978 protein-coding 626069874 Eaf2 ELL associated factor 2 ENCODES a protein that exhibits transcription elongation factor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of epithelial cell proliferation involved in prostate gland development (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); transcription elongation factor complex (ortholog) 4 21654312 21694514 - 30032202 116898827 MODEL JAAIVD010000003;XM_032900179 XP_032756070 ELL-associated factor 2 protein-coding 626069884 LOC116911587 T-complex protein 1 subunit gamma-like 10 18816918 18818560 - 116911587 MODEL JAAIVD010000005 pseudo 626069885 Spint2 serine peptidase inhibitor, Kunitz type 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN basement membrane organization (ortholog); cellular response to BMP stimulus (ortholog); epithelial cell morphogenesis involved in placental branching (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); biliary atresia (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog) 2 166667374 166689999 + 22301074 116892355 MODEL JAAIVD010000001;XM_032894008;XM_032894009 XP_032749899;XP_032749900 kunitz-type protease inhibitor 2 protein-coding 626069899 LOC116904260 elongation factor 1-alpha 1-like 6 34477003 34478471 - 116904260 MODEL JAAIVD010000024 pseudo 626069900 Sftpc surfactant protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cellular response to nitric oxide (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 12 53828046 53831016 + 22301074;30032202 116913610 MODEL JAAIVD010000007;XM_032917862 XP_032773753 pulmonary surfactant-associated protein C protein-coding 626069910 LOC116897548 small nucleolar RNA SNORA17 3 1752803 1752934 - 116897548 MODEL JAAIVD010000012;XR_004387562 snorna 626069913 Mob1a MOB kinase activator 1A ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); INVOLVED IN hippo signaling (ortholog); FOUND IN cytoplasm (ortholog) 6 62887390 62901214 - 30032202 116903612 MODEL JAAIVD010000024;XM_032906256 XP_032762147 protein-coding 626069923 Klf11 KLF transcription factor 11 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to endothelin (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Hepatomegaly (ortholog); Insulin Resistance (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); nuclear body (ortholog) 7 38263422 38275157 + 30032202 116904915 MODEL JAAIVD010000026;XM_032907523 XP_032763414 Krueppel-like factor 11;Kruppel like factor 11 protein-coding 626069931 LOC116908447 U4 spliceosomal RNA 8 53494368 53494542 + 116908447 MODEL JAAIVD010000027 pseudo 626069932 LOC116884419 40S ribosomal protein S3-like 15 74921293 74922659 + 116884419 MODEL JAAIVD010000010 pseudo 626069933 Hnf1b HNF1 homeobox B ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 2 (ortholog); CAKUT (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 86772351 86825605 - 22301074;30032202 116909494 MODEL JAAIVD010000002;XM_032913091;XM_032913092;XM_032913093;XM_032913094;XM_032913096;XM_032913097;XM_032913098;XM_032913099 XP_032768982;XP_032768983;XP_032768984;XP_032768985;XP_032768987;XP_032768988;XP_032768989;XP_032768990 hepatocyte nuclear factor 1-beta protein-coding 626069966 LOC116887216 olfactory receptor 2A12-like 1 38238347 38239288 + 22301074 116887216 MODEL JAAIVD010000025;XM_032888780 XP_032744671 protein-coding 626069969 Spats2 spermatogenesis associated serine rich 2 FOUND IN cytoplasm (ortholog); cytosol (ortholog) 1 271949109 272019185 + 22301074;30032202 116884978 MODEL JAAIVD010000025;XM_032886200 XP_032742091 spermatogenesis-associated serine-rich protein 2 protein-coding 626069986 LOC116898536 carnitine O-acetyltransferase-like 1 98513883 98515770 + 116898536 MODEL JAAIVD010000025 pseudo 626069987 Eya1 EYA transcriptional coactivator and phosphatase 1 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); RNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); aorta morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH anterior segment dysgenesis (ortholog); branchiooculofacial syndrome (ortholog); branchiootic syndrome (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 148719114 148864556 - 22301074;30032202 116904009 MODEL JAAIVD010000025;XM_032906829 XP_032762720 eyes absent homolog 1 protein-coding 626070009 Bhlhe23 basic helix-loop-helix family member e23 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of retinal cell programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); post-embryonic eye morphogenesis (ortholog) 5 157878491 157880685 - 22301074 116900797 MODEL JAAIVD010000023;XM_032902508 XP_032758399 class E basic helix-loop-helix protein 23 protein-coding 626070014 LOC116886550 thyrotropin-releasing hormone receptor-like 17 41989750 41994715 - 22301074;30032202 116886550 MODEL JAAIVD010000011;XM_032888069 XP_032743960 protein-coding 626070021 Otop3 otopetrin 3 ENCODES a protein that exhibits proton channel activity (ortholog); INVOLVED IN proton transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 9 68754747 68766675 - 22301074;30032202 116909487 MODEL JAAIVD010000002;XM_032913085 XP_032768976 proton channel OTOP3 protein-coding 626070032 Alpk2 alpha kinase 2 INVOLVED IN cardiac muscle cell development (ortholog); epicardium morphogenesis (ortholog); establishment of cell polarity (ortholog); FOUND IN basolateral plasma membrane (ortholog) 15 65906558 66006273 + 22301074 116884406 MODEL JAAIVD010000010;XM_032885508 XP_032741399 alpha-protein kinase 2 protein-coding 626070047 LOC116907860 transcription elongation factor A protein 1-like 8 8102046 8102933 + 116907860 MODEL JAAIVD010000027 pseudo 626070048 LOC116910954 AP-5 complex subunit sigma-1-like 10 82776577 82777592 - 116910954 MODEL JAAIVD010000005 pseudo 626070049 Gal galanin and GMAP prepropeptide ENCODES a protein that exhibits galanin receptor activity (ortholog); neuropeptide hormone activity (ortholog); type 1 galanin receptor binding (ortholog); INVOLVED IN behavioral response to ethanol (ortholog); drinking behavior (ortholog); feeding behavior (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); brain ischemia (ortholog); FOUND IN extracellular space (ortholog); neuron projection terminus (ortholog); neuronal cell body (ortholog) 2 4247678 4252378 + 22301074;30032202 116893602 MODEL JAAIVD010000001;XM_032895310 XP_032751201 galanin peptides protein-coding 626070059 Gna12 G protein subunit alpha 12 ENCODES a protein that exhibits D5 dopamine receptor binding (ortholog); G protein activity (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN cell differentiation (ortholog); embryonic digit morphogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH Myocardial Ischemia (ortholog); ulcerative colitis (ortholog); FOUND IN brush border membrane (ortholog); lateral plasma membrane (ortholog); neuron projection (ortholog) 16 12372264 12451392 + 22301074;30032202 116885143 MODEL JAAIVD010000004;XM_032886332 XP_032742223 guanine nucleotide-binding protein subunit alpha-12 protein-coding 626070067 Cnpy4 canopy FGF signaling regulator 4 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN positive regulation of protein localization to plasma membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 16 15559202 15565398 + 30032202 116885712 MODEL JAAIVD010000004;XM_032887020 XP_032742911 protein canopy homolog 4 protein-coding 626070077 Papolb poly(A) polymerase beta PARTICIPATES IN 3'-end pre-mRNA processing pathway; FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 16 10612127 10616280 + 22301074;30032202 116885567 MODEL JAAIVD010000004;XM_032886860 XP_032742751 protein-coding 626070082 LOC116897368 small nuclear ribonucleoprotein Sm D1-like 3 222163496 222164652 + 116897368 MODEL JAAIVD010000012 pseudo 626070083 Ubac2 UBA domain containing 2 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); protein localization to endoplasmic reticulum (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 2870702 3019677 - 22301074;30032202 116914030 MODEL JAAIVD010000007;XM_032918298;XM_032918299 XP_032774189;XP_032774190 ubiquitin-associated domain-containing protein 2 protein-coding 626070099 Rgl1 ral guanine nucleotide dissociation stimulator like 1 10 31971460 32220470 - 22301074;30032202 116911427 MODEL JAAIVD010000005;XM_032915392;XM_032915394;XM_032915395;XM_032915396 XP_032771283;XP_032771285;XP_032771286;XP_032771287 ral guanine nucleotide dissociation stimulator-like 1 protein-coding 626070128 Mpp4 MAGUK p55 scaffold protein 4 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN protein localization to synapse (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); basal part of cell (ortholog) 4 133343779 133383278 + 22301074;30032202 116899415 MODEL JAAIVD010000003;XM_032901153 XP_032757044 MAGUK p55 subfamily member 4;membrane palmitoylated protein 4 protein-coding 626070153 LOC116894372 zinc finger protein 431-like 2 156270446 156273172 - 30032202 116894372 MODEL JAAIVD010000001;XM_032896078 XP_032751969 protein-coding 626070160 Clec4d C-type lectin domain family 4 member D ENCODES a protein that exhibits D-mannose binding (ortholog); immunoglobulin receptor binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antifungal innate immune response (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH lung disease (ortholog); FOUND IN plasma membrane (ortholog) 6 24047554 24056570 + 116904593 MODEL JAAIVD010000024;XM_032907387;XM_032907388 XP_032763278;XP_032763279 protein-coding 626070174 Smyd2 SET and MYND domain containing 2 ENCODES a protein that exhibits histone H3K36 methyltransferase activity (ortholog); p53 binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN heart development (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; p53 signaling pathway; ASSOCIATED WITH Esophageal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 10 67953863 67993372 - 22301074;30032202 116911166 MODEL JAAIVD010000005;XM_032915028 XP_032770919 N-lysine methyltransferase SMYD2 protein-coding 626070190 Tmem126a transmembrane protein 126A INVOLVED IN mitochondrial protein quality control (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); optic nerve development (ortholog); ASSOCIATED WITH Hereditary Optic Atrophies (ortholog); optic atrophy (ortholog); optic atrophy 7 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 2 110585875 110590213 + 30032202 116891851 MODEL JAAIVD010000001;XM_032893223 XP_032749114 protein-coding 626070198 LOC116898358 developmental pluripotency-associated protein 5A-like 4 56317451 56317808 + 116898358 MODEL JAAIVD010000003 pseudo 626070199 LOC116911479 uncharacterized LOC116911479 10 52671579 52675743 - 116911479 MODEL JAAIVD010000005;XR_004389326 ncrna 626070204 Marchf3 membrane associated ring-CH-type finger 3 FOUND IN endosome (ortholog); lysosome (ortholog) 15 74873720 75062618 + 22301074;30032202 116884753 MODEL JAAIVD010000010;XM_032885970;XM_032885971 XP_032741861;XP_032741862 E3 ubiquitin-protein ligase MARCH3 protein-coding 626070217 LOC116883427 alpha-enolase-like 14 55867070 55868389 - 116883427 MODEL JAAIVD010000009 pseudo 626070218 LOC116896051 40S ribosomal protein S26-like 3 199761932 199763488 - 116896051 MODEL JAAIVD010000012 pseudo 626070219 Rad9a RAD9 checkpoint clamp component A ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); enzyme binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); ASSOCIATED WITH Neoplasms, Second Primary (ortholog); FOUND IN checkpoint clamp complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 2 3441658 3448822 + 22301074;30032202 116890778 MODEL JAAIVD010000001;XM_032891244;XM_032891245 XP_032747135;XP_032747136 cell cycle checkpoint control protein RAD9A protein-coding 626070239 Tfpt TCF3 fusion partner ENCODES a protein that exhibits DNA binding (ortholog); protein kinase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN actin filament (ortholog); cytoplasm (ortholog); Ino80 complex (ortholog) 2 178208692 178219817 - 30032202 116892697 MODEL JAAIVD010000001;XM_032894554;XM_032894555 XP_032750445;XP_032750446 protein-coding 626070251 LOC116886934 heat shock cognate 71 kDa protein-like 18 23067543 23069537 - 116886934 MODEL JAAIVD010000013;XR_004386196 pseudo 626070254 LOC116887907 sperm motility kinase X-like X 53647033 53647789 + 116887907 MODEL JAAIVD010000014 pseudo 626070255 LOC116901251 surfeit locus protein 1 ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); Charcot-Marie-Tooth disease type 4K (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN mitochondrion (ortholog) 5 9738418 9741106 + 22301074;30032202 116901251 MODEL JAAIVD010000023;XM_032903004;XM_032903005;XM_032903006;XM_032903007 XP_032758895;XP_032758896;XP_032758897;XP_032758898 protein-coding 626070277 LOC116889765 protein SET-like 116889765 MODEL JAAIVD010000081 pseudo 626070278 LOC116895937 mitogen-activated protein kinase 6-like 3 130782412 130924704 + 116895937 MODEL JAAIVD010000012 pseudo 626070279 LOC116885372 protein PET100 homolog, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 12 (ortholog); FOUND IN mitochondrion (ortholog) 16 1546174 1548913 + 22301074;30032202 116885372 MODEL JAAIVD010000004;XM_032886646;XM_032886647 XP_032742537;XP_032742538 protein-coding 626070290 LOC116895082 small nucleolar RNA SNORD88 2 155283484 155283573 - 116895082 MODEL JAAIVD010000001;XR_004387249 snorna 626070293 LOC116912410 UDP-glucuronosyltransferase 2B7-like 11 1705703 1722123 + 116912410 MODEL JAAIVD010000006 pseudo 626070294 Fam124a family with sequence similarity 124 member A 12 61793378 61850191 - 116913459 MODEL JAAIVD010000007;XM_032917661 XP_032773552 protein FAM124A protein-coding 626070302 LOC116896378 glutathione S-transferase Mu 2 3 50265588 50270340 + 22301074;30032202 116896378 MODEL JAAIVD010000012;XM_032897501 XP_032753392 protein-coding 626070313 LOC116889419 U6 spliceosomal RNA X 66413497 66413603 - 116889419 MODEL JAAIVD010000014;XR_004386384 snrna 626070316 Elp2 elongator acetyltransferase complex subunit 2 ENCODES a protein that exhibits protein kinase binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN regulation of receptor signaling pathway via JAK-STAT (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 48 (ortholog); autosomal recessive intellectual developmental disorder 58 (ortholog); FOUND IN cytosol (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) 15 19230684 19267456 - 22301074;30032202 116884266 MODEL JAAIVD010000010;XM_032885350 XP_032741241 elongator complex protein 2 protein-coding 626070343 LOC116888418 high mobility group protein B4-like X 103782574 103783091 + 116888418 MODEL JAAIVD010000014 pseudo 626070344 LOC116895450 voltage-dependent anion-selective channel protein 1-like 3 75738094 75739174 - 116895450 MODEL JAAIVD010000012 pseudo 626070345 Krt77 keratin 77 FOUND IN cornified envelope (ortholog); cytoskeleton (ortholog) 1 261206608 261217903 + 22301074;30032202 116890204 MODEL JAAIVD010000025;XM_032890938 XP_032746829 keratin, type II cytoskeletal 1b protein-coding 626070357 LOC116905662 phosphoglycerate mutase 1-like 7 45727524 45728728 + 116905662 MODEL JAAIVD010000026 pseudo 626070358 Mesp1 mesoderm posterior bHLH transcription factor 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cardiac atrium formation (ortholog); cardiac cell fate determination (ortholog); cardiac muscle cell differentiation (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); diabetic retinopathy (ortholog); myocardial infarction (ortholog); FOUND IN nucleus (ortholog) 2 120450566 120452092 + 22301074;30032202 116894273 MODEL JAAIVD010000001;XM_032895985 XP_032751876 mesoderm posterior protein 1 protein-coding 626070364 Asb9 ankyrin repeat and SOCS box containing 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN positive regulation of protein catabolic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) X 25053320 25086285 + 22301074;30032202 116889304 MODEL JAAIVD010000014;XM_032890427 XP_032746318 ankyrin repeat and SOCS box protein 9 protein-coding 626070374 Ttc16 tetratricopeptide repeat domain 16 ASSOCIATED WITH primary ovarian insufficiency (ortholog) 5 2866234 2877278 + 22301074 116901132 MODEL JAAIVD010000023;XM_032902730 XP_032758621 tetratricopeptide repeat protein 16 protein-coding 626070391 Slc5a1 solute carrier family 5 member 1 ENCODES a protein that exhibits alpha-glucoside transmembrane transporter activity (ortholog); D-glucose transmembrane transporter activity (ortholog); D-glucose:sodium symporter activity (ortholog); INVOLVED IN alpha-glucoside transport (ortholog); carbohydrate utilization (ortholog); chloride transmembrane transport (ortholog); PARTICIPATES IN lactose degradation pathway; sodium-glucose cotransporter mediated glucose transport pathway; trehalose degradation pathway; ASSOCIATED WITH genetic disease (ortholog); glucose-galactose malabsorption (ortholog); Malabsorption Syndromes (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 11 71667741 71727304 - 22301074;30032202 116912669 MODEL JAAIVD010000006;XM_032916786 XP_032772677 sodium/glucose cotransporter 1 protein-coding 626070410 Slc38a11 solute carrier family 38 member 11 5 42797297 42841702 - 30032202 116901459 MODEL JAAIVD010000023;XM_032903403 XP_032759294 putative sodium-coupled neutral amino acid transporter 11 protein-coding 626070426 LOC116902518 U1 spliceosomal RNA 5 128344211 128344370 + 116902518 MODEL JAAIVD010000023;XR_004388127 snrna 626070429 Igdcc3 immunoglobulin superfamily DCC subclass member 3 INVOLVED IN neuromuscular process controlling balance (ortholog) 8 59482699 59490103 + 22301074;30032202 116908197 MODEL JAAIVD010000027;XM_032911479 XP_032767370 protein-coding 626070443 Cirbp cold inducible RNA binding protein ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(U) RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to cold (ortholog); mRNA stabilization (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH Alcohol-Induced Disorders, Nervous System (ortholog); autism spectrum disorder (ortholog); Hypothermia (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nucleoplasm (ortholog) 1 154702199 154708441 - 22301074;30032202 116905287 MODEL JAAIVD010000025;XM_032908151;XM_032908161;XM_032908168;XM_032908178;XR_004388513 XP_032764042;XP_032764052;XP_032764059;XP_032764069 cold-inducible RNA-binding protein protein-coding 626070466 LOC116904608 thymosin beta-10-like 6 24992197 24992330 + 116904608 MODEL JAAIVD010000024 pseudo 626070467 Acsl6 acyl-CoA synthetase long chain family member 6 ENCODES a protein that exhibits arachidonate-CoA ligase activity (ortholog); enzyme binding (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); amphetamine abuse (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 9 36760359 36818617 + 30032202 116908613 MODEL JAAIVD010000002;XM_032911845 XP_032767736 long-chain-fatty-acid--CoA ligase 6 protein-coding 626070492 LOC116907933 UHRF1-binding protein 1-like 1 168823685 168882065 + 116907933 MODEL JAAIVD010000025;XM_032911152;XM_032911160;XM_032911166 XP_032767043;XP_032767051;XP_032767057 protein-coding 626070514 Meox2 mesenchyme homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN angiogenesis (ortholog); fibroblast proliferation (ortholog); limb development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); myocardial infarction (ortholog); Myocardial Ischemia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 50398741 50460218 + 22301074;30032202 116905682 MODEL JAAIVD010000026;XM_032908666 XP_032764557 homeobox protein MOX-2 protein-coding 626070521 LOC116900494 olfactory receptor 142-like 5 71857904 71858821 - 22301074 116900494 MODEL JAAIVD010000023;XM_032902228 XP_032758119 protein-coding 626070524 LOC116890626 U2 spliceosomal RNA 1 240761719 240761904 - 116890626 MODEL JAAIVD010000025;XR_004386771 snrna 626070527 Elmod1 ELMO domain containing 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN cilium assembly (ortholog); intracellular protein localization (ortholog); protein transport (ortholog); FOUND IN cilium (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 8 47889968 47927267 - 30032202 116906618 MODEL JAAIVD010000027;XM_032909375 XP_032765266 ELMO domain-containing protein 1 protein-coding 626070542 LOC116909276 uncharacterized LOC116909276 9 9114699 9116329 + 116909276 MODEL JAAIVD010000002;XR_004389064 ncrna 626070546 LOC116885879 uncharacterized LOC116885879 16 14293711 14337752 - 116885879 MODEL JAAIVD010000004 pseudo 626070547 LOC116887416 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8345908 8349437 + 116887416 MODEL JAAIVD010000013 pseudo 626070548 LOC116885966 zinc finger protein 431-like 16 3164357 3184842 + 22301074 116885966 MODEL JAAIVD010000004;XM_032887301;XR_004386053 XP_032743192 protein-coding 626070558 LOC116900279 olfactory receptor 8U9-like 5 63467121 63468080 - 22301074;30032202 116900279 MODEL JAAIVD010000023;XM_032902032 XP_032757923 protein-coding 626070561 LOC116913894 putative mitochondrial import inner membrane translocase subunit Tim8 A-B 12 2847610 2851278 - 116913894 MODEL JAAIVD010000007;XM_032918179 XP_032774070 protein-coding 626070567 Gemin8 gem nuclear organelle associated protein 8 INVOLVED IN spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) X 30298175 30316922 + 22301074;30032202 116889032 MODEL JAAIVD010000014;XM_032890231 XP_032746122 gem-associated protein 8 protein-coding 626070575 LOC116896933 surfeit locus protein 6-like 3 117814014 117816358 - 116896933 MODEL JAAIVD010000012 pseudo 626070576 LOC116915144 small nucleolar RNA SNORA17 13 65892568 65892692 + 116915144 MODEL JAAIVD010000008 pseudo 626070577 LOC116895456 alpha-enolase-like 3 79602937 79604236 + 116895456 MODEL JAAIVD010000012 pseudo 626070578 Pdcd2l programmed cell death 2 like 2 164488752 164501724 + 22301074 116892283 MODEL JAAIVD010000001;XM_032893880 XP_032749771 programmed cell death protein 2-like protein-coding 626070590 Cd163 CD163 molecule ENCODES a protein that exhibits scaffold protein binding (ortholog); ASSOCIATED WITH Abdominal Obesity (ortholog); Actinobacillus Infections (ortholog); acute pancreatitis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 23565476 23599157 - 22301074 116903295 MODEL JAAIVD010000024;XM_032905719 XP_032761610 scavenger receptor cysteine-rich type 1 protein M130 protein-coding 626070609 LOC116887338 olfactory receptor 14J1-like 18 10722223 10723194 + 22301074;30032202 116887338 MODEL JAAIVD010000013;XM_032888930 XP_032744821 protein-coding 626070612 LOC116911767 mesoderm posterior protein 2-like 1 166679896 166680696 - 116911767 MODEL JAAIVD010000025 pseudo 626070613 LOC116889750 olfactory receptor 1468-like 116889750 MODEL JAAIVD010000079 pseudo 626070614 LOC116900045 mitochondrial import inner membrane translocase subunit Tim17-B-like 5 3152698 3153159 - 116900045 MODEL JAAIVD010000023 pseudo 626070615 Calu calumenin ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN peripheral nervous system axon regeneration (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); colorectal carcinoma (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); endoplasmic reticulum membrane (ortholog) 6 110188952 110216985 - 22301074;30032202 116904019 MODEL JAAIVD010000024;XM_032906847 XP_032762738 protein-coding 626070626 Sdf2l1 stromal cell derived factor 2 like 1 ENCODES a protein that exhibits ATPase binding (ortholog); misfolded protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); protein refolding (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Crohn's disease (ortholog); Prostatic Neoplasms (ortholog); Spontaneous Abortions (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog); membrane (ortholog) 4 2407957 2410191 - 116898623 MODEL JAAIVD010000003;XM_032899837 XP_032755728 stromal cell-derived factor 2-like protein 1 protein-coding 626070633 Ubtd1 ubiquitin domain containing 1 2 41095578 41148772 + 22301074 116891170 MODEL JAAIVD010000001;XM_032891981;XM_032891982 XP_032747872;XP_032747873 ubiquitin domain-containing protein 1 protein-coding 626070644 LOC116894991 small nucleolar RNA SNORA52 2 8037087 8037220 - 116894991 MODEL JAAIVD010000001;XR_004387182 snorna 626070647 Myo18b myosin XVIIIB INVOLVED IN cardiac muscle cell development (ortholog); in utero embryonic development (ortholog); vasculogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); Fraser syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN filamentous actin (ortholog); unconventional myosin complex (ortholog); Z disc (ortholog) 16 41100057 41294394 + 22301074 116885487 MODEL JAAIVD010000004;XM_032886778 XP_032742669 unconventional myosin-XVIIIb protein-coding 626070693 Chst11 carbohydrate sulfotransferase 11 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity (ortholog); INVOLVED IN cartilage development (ortholog); chondrocyte development (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); OSTEOCHONDRODYSPLASIA, BRACHYDACTYLY, AND OVERLAPPING MALFORMED DIGITS (ortholog); Synpolydactyly 1 (ortholog) 1 165244523 165458490 - 22301074;30032202 116907569 MODEL JAAIVD010000025;XM_032910597;XM_032910607 XP_032766488;XP_032766498 protein-coding 626070704 LOC116898335 pescadillo homolog 4 45328308 45329265 - 116898335 MODEL JAAIVD010000003 pseudo 626070705 Tspo2 translocator protein 2 ENCODES a protein that exhibits 5-aminolevulinic acid transmembrane transporter activity (ortholog); cholesterol binding (ortholog); INVOLVED IN 5-aminolevulinic acid import across plasma membrane (ortholog); enucleate erythrocyte differentiation (ortholog); import across plasma membrane (ortholog); FOUND IN endoplasmic reticulum (ortholog); organelle membrane (ortholog); plasma membrane (ortholog) 4 81477405 81478769 + 22301074;30032202 116898028 MODEL JAAIVD010000003;XM_032899417 XP_032755308 protein-coding 626070710 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889665 MODEL JAAIVD010000045 trna 626070711 LOC116899107 uncharacterized LOC116899107 4 83306812 83307567 - 116899107 MODEL JAAIVD010000003;XR_004387689 ncrna 626070715 LOC116884360 ral guanine nucleotide dissociation stimulator-like 15 39244673 39246350 + 116884360 MODEL JAAIVD010000010;XM_032885487 XP_032741378 protein-coding 626070720 Ankef1 ankyrin repeat and EF-hand domain containing 1 5 116146736 116155866 - 22301074 116901011 MODEL JAAIVD010000023;XM_032902611 XP_032758502 ankyrin repeat and EF-hand domain-containing protein 1 protein-coding 626070729 LOC116894332 mas-related G-protein coupled receptor member B8-like 2 152034300 152035277 + 116894332 MODEL JAAIVD010000001 pseudo 626070730 LOC116890495 olfactory receptor 10AD1-like 1 271048459 271056266 - 22301074 116890495 MODEL JAAIVD010000025;XM_032891010 XP_032746901 protein-coding 626070735 LOC116914978 60S ribosomal protein L13-like 13 22270499 22287935 - 116914978 MODEL JAAIVD010000008 pseudo 626070736 Sytl2 synaptotagmin like 2 ENCODES a protein that exhibits neurexin family protein binding (ortholog); phosphatase binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN exocytosis (ortholog); positive regulation of mucus secretion (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH angioedema (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); exocytic vesicle (ortholog); melanosome (ortholog) 2 110767209 110830250 - 22301074;30032202 116891854 MODEL JAAIVD010000001;XM_032893226;XM_032893227;XM_032893228;XM_032893229 XP_032749117;XP_032749118;XP_032749119;XP_032749120 synaptotagmin-like protein 2 protein-coding 626070765 Znf706 zinc finger protein 706 INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of stem cell population maintenance (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 210516231 210521032 - 116910623 MODEL JAAIVD010000025;XM_032914575 XP_032770466 protein-coding 626070772 LOC116913216 multifunctional methyltransferase subunit TRM112-like protein 12 69285112 69285519 - 116913216 MODEL JAAIVD010000007 pseudo 626070773 Slc9a7 solute carrier family 9 member A7 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN regulation of Golgi lumen acidification (ortholog); regulation of pH (ortholog); ASSOCIATED WITH X-linked intellectual developmental disorder 108 (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); recycling endosome membrane (ortholog) X 3323083 3954751 - 22301074;30032202 116888698 MODEL JAAIVD010000014;XM_032889988 XP_032745879 sodium/hydrogen exchanger 7 protein-coding 626070794 Ddo D-aspartate oxidase ENCODES a protein that exhibits D-aspartate oxidase activity (ortholog); FAD binding (ortholog); INVOLVED IN aspartate metabolic process (ortholog); D-amino acid catabolic process (ortholog); grooming behavior (ortholog); PARTICIPATES IN Canavan disease pathway; ASSOCIATED WITH Ataxia (ortholog); sexual dysfunction (ortholog); Weight Gain (ortholog); FOUND IN cytosol (ortholog); peroxisome (ortholog) 18 40391262 40408485 + 22301074;30032202 116887394 MODEL JAAIVD010000013;XM_032888988 XP_032744879 protein-coding 626070802 Tcerg1l transcription elongation regulator 1 like ASSOCIATED WITH Colorectal Neoplasms (ortholog) 2 63592407 63775508 + 30032202 116891374 MODEL JAAIVD010000001;XM_032892375 XP_032748266 transcription elongation regulator 1-like protein protein-coding 626070818 Rims3 regulating synaptic membrane exocytosis 3 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); regulation of membrane potential (ortholog); regulation of synapse organization (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic cytosol (ortholog) 1 36117045 36131074 - 30032202 116897257 MODEL JAAIVD010000025;XM_032898993 XP_032754884 regulating synaptic membrane exocytosis protein 3 protein-coding 626070828 LOC116913962 mast cell protease 8 12 68922543 68925808 + 22301074;30032202 116913962 MODEL JAAIVD010000007;XM_032918231 XP_032774122 protein-coding 626070837 LOC116893400 elongation factor 1-alpha 1-like 2 171899309 171899846 - 116893400 MODEL JAAIVD010000001 pseudo 626070838 Tbc1d8b TBC1 domain family member 8B INVOLVED IN glomerular filtration (ortholog); vesicle-mediated transport (ortholog); ASSOCIATED WITH nephrotic syndrome (ortholog); nephrotic syndrome type 20 (ortholog); FOUND IN cytosol (ortholog) X 92319112 92396734 - 22301074 116888648 MODEL JAAIVD010000014;XM_032889938 XP_032745829 protein-coding 626070863 Nxph1 neurexophilin 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); synaptic cleft (ortholog) 6 129202906 129205213 - 30032202 116904076 MODEL JAAIVD010000024;XM_032906940 XP_032762831 neurexophilin-1 protein-coding 626070868 Tmt1b thiol methyltransferase 1B ENCODES a protein that exhibits S-adenosylmethionine-dependent methyltransferase activity (ortholog); thiol S-methyltransferase activity (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog) 1 156435799 156438542 - 22301074 116906650 MODEL JAAIVD010000025;XM_032909433 XP_032765324 Mettl7b methyltransferase like 7B;methyltransferase-like protein 7B protein-coding 626070874 Thap1 THAP domain containing 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA-templated transcription (ortholog); endothelial cell proliferation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH dystonia (ortholog); genetic disease (ortholog); Multiple mitochondrial dysfunctions syndrome 9B (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 60340039 60345778 - 30032202 116914237 MODEL JAAIVD010000008;XM_032918442 XP_032774333 THAP domain-containing protein 1 protein-coding 626070881 Ttc39c tetratricopeptide repeat domain 39C 15 30965390 31051986 - 22301074;30032202 116884332 MODEL JAAIVD010000010;XM_032885466 XP_032741357 tetratricopeptide repeat protein 39C protein-coding 626070899 Il36a interleukin 36 alpha ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production (ortholog); positive regulation of interleukin-6 production (ortholog); FOUND IN extracellular space (ortholog) 5 12974710 12979739 - 22301074;30032202 116900109 MODEL JAAIVD010000023;XM_032901886 XP_032757777 interleukin-36 alpha protein-coding 626070909 LOC116894112 olfactory receptor 52N4-like 2 103621758 103622726 + 22301074 116894112 MODEL JAAIVD010000001;XM_032895830 XP_032751721 protein-coding 626070912 Wnk2 WNK lysine deficient protein kinase 2 INVOLVED IN monoatomic ion homeostasis (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH genetic disease (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 68025710 68131873 - 22301074;30032202 116884046 MODEL JAAIVD010000009;XM_032885292 XP_032741183 serine/threonine-protein kinase WNK2 protein-coding 626070946 Pkn1 protein kinase N1 ENCODES a protein that exhibits chromatin binding (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); histone binding (ortholog); INVOLVED IN B cell apoptotic process (ortholog); B cell homeostasis (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH Neointima (ortholog); FOUND IN cleavage furrow (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 17 16576324 16607301 + 22301074 116886709 MODEL JAAIVD010000011;XM_032888214;XM_032888215 XP_032744105;XP_032744106 serine/threonine-protein kinase N1 protein-coding 626070977 LOC116893545 protein SOGA3-like 2 203953006 203979091 + 116893545 MODEL JAAIVD010000001;XM_032895263 XP_032751154 protein-coding 626070987 LOC116895748 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 3-like 3 35612871 35652301 + 30032202 116895748 MODEL JAAIVD010000012;XM_032896917 XP_032752808 protein-coding 626070999 Eif3f eukaryotic translation initiation factor 3 subunit F ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN IRES-dependent viral translational initiation (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 67 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog); synapse (ortholog) 2 92539318 92548162 - 22301074;30032202 116891685 MODEL JAAIVD010000001;XM_032892948 XP_032748839 protein-coding 626071011 Arnt aryl hydrocarbon receptor nuclear translocator ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); PARTICIPATES IN aryl hydrocarbon receptor signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Cardiac Fibrosis (ortholog); Cardiomegaly (ortholog); FOUND IN cytoplasm (ortholog); nuclear aryl hydrocarbon receptor complex (ortholog); nuclear body (ortholog) 3 61773940 61830665 - 22301074;30032202 116896552 MODEL JAAIVD010000012;XM_032897740;XM_032897741;XM_032897742;XM_032897743;XM_032897744 XP_032753631;XP_032753632;XP_032753633;XP_032753634;XP_032753635 protein-coding 626071048 LOC116914989 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like 13 26160147 26162018 - 116914989 MODEL JAAIVD010000008 pseudo 626071049 Slc25a4 solute carrier family 25 member 4 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); enzyme binding (ortholog); oxidative phosphorylation uncoupler activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); ADP transport (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); Alzheimer's disease (ortholog); autosomal dominant progressive external ophthalmoplegia with mitochondrial DNA deletions 2 (ortholog); FOUND IN membrane (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) 13 41704992 41708791 + 22301074;30032202 116914424 MODEL JAAIVD010000008;XM_032918694 XP_032774585 ADP/ATP translocase 1 protein-coding 626071057 LOC116899319 uncharacterized LOC116899319 4 115788831 115792316 - 116899319 MODEL JAAIVD010000003;XR_004387703 ncrna 626071061 Gjd2 gap junction protein delta 2 INVOLVED IN cell-cell signaling (ortholog); chemical synaptic transmission (ortholog); neuronal action potential (ortholog); ASSOCIATED WITH Brain Hypoxia (ortholog); myopia (ortholog); refractive error (ortholog); FOUND IN gap junction (ortholog) 5 92207343 92211181 - 22301074;30032202 116901758 MODEL JAAIVD010000023;XM_032903896 XP_032759787 gap junction delta-2 protein protein-coding 626071068 Lmbrd1 LMBR1 domain containing 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); clathrin heavy chain binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); gastrulation (ortholog); insulin receptor internalization (ortholog); ASSOCIATED WITH Donnai-Barrow syndrome (ortholog); genetic disease (ortholog); inherited metabolic disorder (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); clathrin-coated vesicle (ortholog); endoplasmic reticulum membrane (ortholog) 4 102030333 102113048 + 30032202 116899260 MODEL JAAIVD010000003;XM_032900876 XP_032756767 probable lysosomal cobalamin transporter protein-coding 626071088 Rnf10 ring finger protein 10 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of Schwann cell proliferation (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of myelination (ortholog); ASSOCIATED WITH Cardiotoxicity (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); extrinsic component of postsynaptic density membrane (ortholog) 16 38554815 38588338 + 30032202 116885124 MODEL JAAIVD010000004;XM_032886278;XM_032886279 XP_032742169;XP_032742170 protein-coding 626071111 Lrch4 leucine rich repeats and calponin homology domain containing 4 INVOLVED IN membrane raft assembly (ortholog); positive regulation of toll-like receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog); PML body (ortholog) 16 16384731 16395731 - 22301074 116885471 MODEL JAAIVD010000004;XM_032886752;XM_032886753 XP_032742643;XP_032742644 leucine-rich repeat and calponin homology domain-containing protein 4 protein-coding 626071137 LOC116894773 elongation factor 1-alpha 1-like 2 224373642 224378182 - 116894773 MODEL JAAIVD010000001 pseudo 626071138 Kmt5a lysine methyltransferase 5A ENCODES a protein that exhibits histone H4K20 methyltransferase activity (ortholog); histone methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; p53 signaling pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 29410806 29427498 - 22301074 116885259 MODEL JAAIVD010000004;XM_032886497 XP_032742388 N-lysine methyltransferase KMT5A protein-coding 626071148 Smdt1 single-pass membrane protein with aspartate rich tail 1 ENCODES a protein that exhibits channel activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); cellular response to calcium ion starvation (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 252074169 252077366 + 22301074;30032202 116914281 MODEL JAAIVD010000025;XM_032918507 XP_032774398 essential MCU regulator, mitochondrial protein-coding 626071155 Dgkg diacylglycerol kinase gamma ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); lipid binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); glycerolipid metabolic process (ortholog); lipid phosphorylation (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 4 7131699 7286909 - 22301074;30032202 116898719 MODEL JAAIVD010000003;XM_032900014;XM_032900015 XP_032755905;XP_032755906 protein-coding 626071184 Smcp sperm mitochondria associated cysteine rich protein INVOLVED IN binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); penetration of zona pellucida (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 3 1494562 1499139 + 116895203 MODEL JAAIVD010000012;XM_032896543 XP_032752434 sperm mitochondrial-associated cysteine-rich protein protein-coding 626071189 LOC116902653 U4 spliceosomal RNA 5 36771669 36771822 - 116902653 MODEL JAAIVD010000023 pseudo 626071190 Myc MYC proto-oncogene, bHLH transcription factor ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN amino acid transport (ortholog); B cell apoptotic process (ortholog); branching involved in ureteric bud morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; interleukin-2 signaling pathway; interleukin-6 signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); euchromatin (ortholog) 1 236608104 236613017 - 22301074;30032202 116912054 MODEL JAAIVD010000025;XM_032915922 XP_032771813 myc proto-oncogene protein protein-coding 626071197 LOC116894242 olfactory receptor 14C36-like 2 114459149 114460087 - 22301074;30032202 116894242 MODEL JAAIVD010000001;XM_032895947 XP_032751838 protein-coding 626071201 LOC116894877 U6 spliceosomal RNA 2 43688454 43688561 + 116894877 MODEL JAAIVD010000001;XR_004387089 snrna 626071204 LOC116892099 serum amyloid A-4 protein 2 152647100 152649675 + 22301074 116892099 MODEL JAAIVD010000001;XM_032893576 XP_032749467 protein-coding 626071209 LOC116884342 ankyrin repeat and KH domain-containing protein 1-like 15 7720654 7823087 - 22301074;30032202 116884342 MODEL JAAIVD010000010;XM_032885474 XP_032741365 protein-coding 626071248 Camk4 calcium/calmodulin dependent protein kinase IV ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN long-term memory (ortholog); myeloid dendritic cell differentiation (ortholog); neuron-neuron synaptic transmission (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); cocaine dependence (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); fibrillar center (ortholog) 15 11104675 11317674 - 22301074;30032202 116884638 MODEL JAAIVD010000010;XM_032885778 XP_032741669 calcium/calmodulin-dependent protein kinase type IV protein-coding 626071263 Polg DNA polymerase gamma, catalytic subunit ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); INVOLVED IN base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); Ataxia (ortholog); FOUND IN gamma DNA polymerase complex (ortholog); mitochondrial chromosome (ortholog); mitochondrial matrix (ortholog) 2 120786832 120803764 + 22301074;30032202 116891944 MODEL JAAIVD010000001;XM_032893384 XP_032749275 DNA polymerase subunit gamma-1 protein-coding 626071290 LOC116894656 zinc finger protein 773-like 2 208163024 208195986 + 22301074 116894656 MODEL JAAIVD010000001;XM_032896361;XR_004387035 XP_032752252 protein-coding 626071297 LOC116896889 60S ribosomal protein L35a-like 3 102968348 102968688 + 116896889 MODEL JAAIVD010000012 pseudo 626071298 LOC116912823 60S ribosomal protein L7a-like 11 27803280 27804084 + 116912823 MODEL JAAIVD010000006 pseudo 626071299 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 4 110662817 110662888 - 116899952 MODEL JAAIVD010000003 trna 626071300 Saal1 serum amyloid A like 1 INVOLVED IN positive regulation of synoviocyte proliferation (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 152666205 152684224 + 30032202 116892101 MODEL JAAIVD010000001;XM_032893578;XM_032893579 XP_032749469;XP_032749470 protein SAAL1 protein-coding 626071319 Rab8a RAB8A, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN axonogenesis (ortholog); cellular response to insulin stimulus (ortholog); cilium assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN actin cytoskeleton (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 13 13994778 14015116 + 22301074;30032202 116914531 MODEL JAAIVD010000008;XM_032918859 XP_032774750 ras-related protein Rab-8A protein-coding 626071331 C3H1orf56 chromosome 3 C1orf56 homolog INVOLVED IN regulation of cell population proliferation (ortholog) 3 62007078 62010993 + 30032202 116895413 MODEL JAAIVD010000012;XM_032896695 XP_032752586 protein MENT protein-coding 626071337 Triml1 tripartite motif family like 1 ASSOCIATED WITH prostate cancer (ortholog) 13 44540294 44549519 - 22301074 116915060 MODEL JAAIVD010000008;XM_032919477 XP_032775368 probable E3 ubiquitin-protein ligase TRIML1 protein-coding 626071345 Ccl5 C-C motif chemokine ligand 5 ENCODES a protein that exhibits CCR1 chemokine receptor binding (ortholog); CCR5 chemokine receptor binding (ortholog); chemoattractant activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cell-cell signaling (ortholog); cellular response to alkyl hydroperoxide (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); alcoholic hepatitis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 9 87159440 87164155 + 22301074;30032202 116909010 MODEL JAAIVD010000002;XM_032912484 XP_032768375 C-C motif chemokine 5 protein-coding 626071352 Znf784 zinc finger protein 784 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog) 2 177610781 177613963 - 30032202 116892687 MODEL JAAIVD010000001;XM_032894542 XP_032750433 protein-coding 626071358 LOC116894591 vomeronasal type-1 receptor 4-like 2 181334708 181335655 + 22301074;30032202 116894591 MODEL JAAIVD010000001;XM_032896310 XP_032752201 protein-coding 626071362 Cops5 COP9 signalosome subunit 5 ENCODES a protein that exhibits enzyme binding (ortholog); macrophage migration inhibitory factor binding (ortholog); metal-dependent deubiquitinase activity (ortholog); INVOLVED IN exosomal secretion (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN chromatin (ortholog); COP9 signalosome (ortholog); cytoplasm (ortholog) 1 144786210 144804342 - 22301074;30032202 116903876 MODEL JAAIVD010000025;XM_032906632;XM_032906640 XP_032762523;XP_032762531 COP9 signalosome complex subunit 5 protein-coding 626071378 Tmem128 transmembrane protein 128 11 66920809 66929858 - 116912517 MODEL JAAIVD010000006;XM_032916606;XM_032916607;XM_032916608 XP_032772497;XP_032772498;XP_032772499 protein-coding 626071393 Bspry B-box and SPRY domain containing INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN cell leading edge (ortholog); perinuclear region of cytoplasm (ortholog) 1 91036001 91057833 - 22301074 116901384 MODEL JAAIVD010000025;XM_032903255 XP_032759146 B box and SPRY domain-containing protein protein-coding 626071403 LOC116910282 olfactory receptor 1-like 9 42125288 42126182 + 22301074;30032202 116910282 MODEL JAAIVD010000002;XM_032914155 XP_032770046 protein-coding 626071406 LOC116910934 peptidyl-prolyl cis-trans isomerase D-like 10 68385845 68497916 - 116910934 MODEL JAAIVD010000005 pseudo 626071407 Lsm5 LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); mRNA splicing, via spliceosome (ortholog); response to bacterium (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); Lsm2-8 complex (ortholog); nucleus (ortholog) 6 84379139 84382419 + 22301074;30032202 116903746 MODEL JAAIVD010000024;XM_032906436 XP_032762327 U6 snRNA-associated Sm-like protein LSm5 protein-coding 626071416 Dpp3 dipeptidyl peptidase 3 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN protein catabolic process (ortholog); proteolysis (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN cytosol (ortholog) 2 2728660 2753204 + 22301074;30032202 116890752 MODEL JAAIVD010000001;XM_032891208 XP_032747099 protein-coding 626071438 Lamtor2 late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); fibroblast migration (ortholog); intracellular protein localization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Immunodeficiency due to Defect in MAPBP-Interacting Protein (ortholog); FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 3 65010035 65013332 + 30032202 116896682 MODEL JAAIVD010000012;XM_032898064;XM_032898066 XP_032753955;XP_032753957 ragulator complex protein LAMTOR2 protein-coding 626071450 Spmip4 sperm microtubule inner protein 4 FOUND IN centrosome (ortholog) 6 90481126 90506740 + 30032202 116903822 MODEL JAAIVD010000024;XM_032906535 XP_032762426 C6H7orf31 chromosome 6 C7orf31 homolog;sperm associated microtubule inner protein 4;uncharacterized protein C7orf31 homolog protein-coding 626071464 LOC116914189 U6 spliceosomal RNA 12 74389711 74389815 - 116914189 MODEL JAAIVD010000007;XR_004389728 snrna 626071467 LOC116883189 HCLS1-associated protein X-1-like 14 34780017 34780877 + 116883189 MODEL JAAIVD010000009 pseudo 626071468 Gdi1 GDP dissociation inhibitor 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); Rab GDP-dissociation inhibitor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); Golgi to plasma membrane transport (ortholog); negative regulation of axonogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Chemical and Drug Induced Liver Injury (ortholog); cognitive disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) X 128307519 128314024 + 22301074;30032202 116887798 MODEL JAAIVD010000014;XM_032889322 XP_032745213 rab GDP dissociation inhibitor alpha protein-coding 626071483 LOC116912313 vomeronasal type-2 receptor 116-like 11 18935126 18946166 - 22301074;30032202 116912313 MODEL JAAIVD010000006;XM_032916331;XM_032916332;XM_032916333 XP_032772222;XP_032772223;XP_032772224 protein-coding 626071495 Trim66 tripartite motif containing 66 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); FOUND IN chromocenter (ortholog); nucleus (ortholog) 2 91975516 92030070 + 22301074 116891680 MODEL JAAIVD010000001;XM_032892939 XP_032748830 tripartite motif-containing protein 66 protein-coding 626071518 LOC116912573 glyceraldehyde-3-phosphate dehydrogenase-like 11 20006203 20007213 - 116912573 MODEL JAAIVD010000006 pseudo 626071519 Defb115 defensin beta 115 5 131840849 131843311 + 116901043 MODEL JAAIVD010000023;XM_032902624 XP_032758515 beta-defensin 115 protein-coding 626071524 LOC116896034 uncharacterized LOC116896034 3 189255355 189257197 + 116896034 MODEL JAAIVD010000012 pseudo 626071525 Plekha8 pleckstrin homology domain containing A8 ENCODES a protein that exhibits ceramide binding (ortholog); glycolipid binding (ortholog); glycolipid transfer activity (ortholog); INVOLVED IN ER to Golgi ceramide transport (ortholog); lipid transport (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); trans-Golgi network (ortholog) 6 86430043 86476381 - 22301074;30032202 116903770 MODEL JAAIVD010000024;XM_032906459 XP_032762350 pleckstrin homology domain-containing family A member 8 protein-coding 626071543 Ugt8 UDP glycosyltransferase 8 ENCODES a protein that exhibits N-acylsphingosine galactosyltransferase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); galactosylceramide biosynthetic process (ortholog); neuron projection morphogenesis (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; FOUND IN endoplasmic reticulum (ortholog) 3 33484203 33552936 + 22301074 116896282 MODEL JAAIVD010000012;XM_032897362 XP_032753253 2-hydroxyacylsphingosine 1-beta-galactosyltransferase protein-coding 626071553 LOC116907016 olfactory receptor 147 8 32177668 32178642 + 22301074;30032202 116907016 MODEL JAAIVD010000027;XM_032909950 XP_032765841 protein-coding 626071557 Galt galactose-1-phosphate uridylyltransferase ENCODES a protein that exhibits UDP-glucose:hexose-1-phosphate uridylyltransferase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN galactose metabolic process (ortholog); glycolytic process from galactose (ortholog); UDP-alpha-D-glucose catabolic process (ortholog); PARTICIPATES IN galactokinase deficiency pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH classic galactosemia (ortholog); galactosemia (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog) 1 3796252 3799509 - 22301074;30032202 116891292 MODEL JAAIVD010000025;XM_032892204 XP_032748095 protein-coding 626071572 LOC116885762 nucleophosmin-like 16 13686775 13687709 - 116885762 MODEL JAAIVD010000004 pseudo 626071573 Uspl1 ubiquitin specific peptidase like 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); SUMO binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); Cajal body organization (ortholog); cell population proliferation (ortholog); FOUND IN Cajal body (ortholog) 16 4645212 4671708 - 22301074;30032202 116885384 MODEL JAAIVD010000004;XM_032886663;XM_032886664 XP_032742554;XP_032742555 SUMO-specific isopeptidase USPL1 protein-coding 626071589 LOC116889878 olfactory receptor 9-like 1 156475388 156476325 + 22301074 116889878 MODEL JAAIVD010000025;XM_032890702 XP_032746593 protein-coding 626071592 LOC116903040 40S ribosomal protein SA-like 6 159413445 159414399 + 22301074;30032202 116903040 MODEL JAAIVD010000024;XM_032905342 XP_032761233 protein-coding 626071596 LOC116903583 40S ribosomal protein S12-like 6 26731065 26731492 - 22301074;30032202 116903583 MODEL JAAIVD010000024;XM_032906206 XP_032762097 protein-coding 626071600 LOC116887108 keratin-associated protein 10-1-like 18 1142545 1143277 + 22301074;30032202 116887108 MODEL JAAIVD010000013;XM_032888641;XM_032888642;XM_032888643;XM_032888644 XP_032744532;XP_032744533;XP_032744534;XP_032744535 keratin-associated protein 10-10-like;keratin-associated protein 10-3-like protein-coding 626071613 LOC116883828 putative olfactory receptor 2W6 14 41328358 41329296 - 22301074 116883828 MODEL JAAIVD010000009;XM_032885087 XP_032740978 protein-coding 626071616 Dcaf6 DDB1 and CUL4 associated factor 6 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); Prostatic Neoplasms (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 44474390 44575156 - 22301074;30032202 116911092 MODEL JAAIVD010000005;XM_032914922 XP_032770813 DDB1- and CUL4-associated factor 6 protein-coding 626071639 C2cd3 C2 domain containing 3 centriole elongation regulator INVOLVED IN brain development (ortholog); centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 2 98668555 98766759 + 30032202 116891739 MODEL JAAIVD010000001;XM_032893044;XM_032893045 XP_032748935;XP_032748936 C2 domain-containing protein 3 protein-coding 626071679 LOC116890142 synaptogyrin-1-like 1 259268807 259274582 + 30032202 116890142 MODEL JAAIVD010000025;XM_032890880 XP_032746771 protein-coding 626071685 Klf7 KLF transcription factor 7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); dendrite morphogenesis (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 137952088 138045828 - 30032202 116899449 MODEL JAAIVD010000003;XM_032901220 XP_032757111 Krueppel-like factor 7;Kruppel like factor 7 protein-coding 626071694 LOC116884794 heterogeneous nuclear ribonucleoprotein A3-like 15 63622791 63624290 - 116884794 MODEL JAAIVD010000010;XR_004385895 pseudo 626071697 LOC116897632 small nucleolar RNA U13 3 54403073 54403177 - 116897632 MODEL JAAIVD010000012;XR_004387611 snorna 626071700 LOC116894373 vomeronasal type-2 receptor 116-like 2 156350276 156386187 - 22301074;30032202 116894373 MODEL JAAIVD010000001;XM_032896079 XP_032751970 protein-coding 626071708 Pgam2 phosphoglycerate mutase 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphoglycerate mutase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); gluconeogenesis (ortholog); glycolytic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH Dimauro Disease (ortholog); myoglobinuria (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog) 11 74762132 74764271 - 22301074;30032202 116912182 MODEL JAAIVD010000006;XM_032916115 XP_032772006 protein-coding 626071715 LOC116910958 ras GTPase-activating protein-binding protein 1-like 10 83569673 83571233 - 116910958 MODEL JAAIVD010000005 pseudo 626071716 LOC116886624 thrombospondin type-1 domain-containing protein 8-like 17 15321591 15323357 + 116886624 MODEL JAAIVD010000011;XM_032888131 XP_032744022 protein-coding 626071720 Fbxl4 F-box and leucine rich repeat protein 4 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); mitophagy (ortholog); negative regulation of mitophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); mitochondrial DNA depletion syndrome (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 120897501 120980791 - 22301074;30032202 116902846 MODEL JAAIVD010000025;XM_032905178;XM_032905185;XM_032905193;XM_032905201 XP_032761069;XP_032761076;XP_032761084;XP_032761092 F-box/LRR-repeat protein 4 protein-coding 626071738 Plekha7 pleckstrin homology domain containing A7 ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN cell-cell adhesion mediated by cadherin (ortholog); epithelial cell-cell adhesion (ortholog); pore complex assembly (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH angle-closure glaucoma (ortholog); Cardiac Fibrosis (ortholog); cleft lip (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); centrosome (ortholog) 2 85274378 85455140 + 22301074;30032202 116891626 MODEL JAAIVD010000001;XM_032892833;XM_032892835;XM_032892836;XM_032892837 XP_032748724;XP_032748726;XP_032748727;XP_032748728 pleckstrin homology domain-containing family A member 7 protein-coding 626071782 Nolc1 nucleolar and coiled-body phosphoprotein 1 ENCODES a protein that exhibits box C/D methylation guide snoRNP complex binding (ortholog); box C/D sno(s)RNA binding (ortholog); box H/ACA snoRNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); box H/ACA sno(s)RNA metabolic process (ortholog); neural crest cell development (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); box H/ACA snoRNP complex (ortholog); Cajal body (ortholog) 2 45545108 45554747 + 22301074;30032202 116891238 MODEL JAAIVD010000001;XM_032892100;XM_032892101 XP_032747991;XP_032747992 protein-coding 626071801 LOC116902919 metalloproteinase inhibitor 1-like 6 110552415 110554211 - 116902919 MODEL JAAIVD010000024 pseudo 626071802 LOC116889416 5S ribosomal RNA X 45275393 45275511 - 116889416 MODEL JAAIVD010000014;XR_004386381 rrna 626071805 Araf A-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits MAP kinase kinase kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of peptidyl-serine phosphorylation (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); high grade glioma (ortholog); X-linked epilepsy with variable learning disabilities and behavior disorders (ortholog); FOUND IN mitochondrion (ortholog) X 2703479 2767908 + 22301074;30032202 116889396 MODEL JAAIVD010000014;XM_032890500 XP_032746391 serine/threonine-protein kinase A-Raf protein-coding 626071825 LOC116902468 U6 spliceosomal RNA 5 2899314 2899420 - 116902468 MODEL JAAIVD010000023;XR_004388086 snrna 626071828 LOC116895000 U1 spliceosomal RNA 2 76662769 76662893 + 116895000 MODEL JAAIVD010000001 pseudo 626071829 LOC116886983 uncharacterized LOC116886983 18 44979305 44980495 + 116886983 MODEL JAAIVD010000013;XM_032888469 XP_032744360 uncharacterized protein LOC116886983 protein-coding 626071832 Hectd4 HECT domain E3 ubiquitin protein ligase 4 INVOLVED IN glucose homeostasis (ortholog); glucose metabolic process (ortholog); ASSOCIATED WITH alcohol-induced mental disorder (ortholog); autism spectrum disorder (ortholog); coronary artery disease (ortholog) 16 32449404 32600070 - 22301074 116885495 MODEL JAAIVD010000004;XM_032886787;XM_032886788 XP_032742678;XP_032742679 probable E3 ubiquitin-protein ligase HECTD4 protein-coding 626071914 LOC116898463 WW domain-binding protein 11-like 4 105431745 105433274 - 116898463 MODEL JAAIVD010000003 pseudo 626071915 LOC116901556 heat shock cognate 71 kDa protein-like 5 55444781 55446727 - 116901556 MODEL JAAIVD010000023 pseudo 626071916 Smg7 SMG7 nonsense mediated mRNA decay factor ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); telomeric DNA binding (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 10 32300052 32362836 - 22301074;30032202 116911745 MODEL JAAIVD010000005;XM_032915731;XM_032915732;XM_032915733;XM_032915734;XM_032915735;XM_032915736 XP_032771622;XP_032771623;XP_032771624;XP_032771625;XP_032771626;XP_032771627 protein SMG7 protein-coding 626071957 Slc23a2 solute carrier family 23 member 2 ENCODES a protein that exhibits L-ascorbate:sodium symporter activity (ortholog); L-ascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN blood circulation (ortholog); cellular response to ethanol (ortholog); L-ascorbic acid metabolic process (ortholog); ASSOCIATED WITH Binge Drinking (ortholog); cholestasis (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 5 111773578 111866235 - 22301074;30032202 116901999 MODEL JAAIVD010000023;XM_032904256;XM_032904257;XM_032904258 XP_032760147;XP_032760148;XP_032760149 protein-coding 626071984 Sema3b semaphorin 3B ASSOCIATED WITH Endometrial Neoplasms (ortholog); neuroblastoma (ortholog); Neurodevelopmental Disorders (ortholog) 8 98913417 98923095 - 30032202 116907535 MODEL JAAIVD010000027;XM_032910554 XP_032766445 semaphorin-3B protein-coding 626072006 Adarb1 adenosine deaminase RNA specific B1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); double-stranded RNA adenosine deaminase activity (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); facial nerve morphogenesis (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 623613 751056 - 22301074;30032202 116887695 MODEL JAAIVD010000013;XM_032889289;XM_032889290;XM_032889291 XP_032745180;XP_032745181;XP_032745182 double-stranded RNA-specific editase 1 protein-coding 626072026 LOC116890985 oocyte-secreted protein 1-like 2 11173284 11187806 + 116890985 MODEL JAAIVD010000001;XM_032891658 XP_032747549 protein-coding 626072035 LOC116894150 olfactory receptor 2AG1-like 2 104848743 104849692 - 22301074 116894150 MODEL JAAIVD010000001;XM_032895869 XP_032751760 protein-coding 626072038 LOC116902644 5S ribosomal RNA 5 34630930 34631048 - 116902644 MODEL JAAIVD010000023 pseudo 626072039 LOC116894597 vomeronasal type-1 receptor 4-like 2 181564703 181565664 - 22301074;30032202 116894597 MODEL JAAIVD010000001;XM_032896314 XP_032752205 protein-coding 626072043 LOC116887799 uncharacterized LOC116887799 X 127311510 127312181 + 116887799 MODEL JAAIVD010000014;XM_032889323;XM_032889324 XP_032745214;XP_032745215 uncharacterized protein LOC116887799 protein-coding 626072053 Med1 mediator complex subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN cortisol signaling pathway; estrogen signaling pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN chromatin (ortholog); core mediator complex (ortholog); mediator complex (ortholog) 9 56200355 56242534 + 22301074;30032202 116908622 MODEL JAAIVD010000002;XM_032911869;XM_032911870;XM_032911871;XM_032911872;XM_032911874 XP_032767760;XP_032767761;XP_032767762;XP_032767763;XP_032767765 mediator of RNA polymerase II transcription subunit 1 protein-coding 626072089 LOC116911811 small nucleolar RNA SNORA36 family 10 63406813 63406944 + 116911811 MODEL JAAIVD010000005;XR_004389350 snorna 626072092 Map3k9 mitogen-activated protein kinase kinase kinase 9 ENCODES a protein that exhibits molecular function activator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of cellular process (ortholog); protein autophosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH melanoma (ortholog) 7 95913424 95975939 - 22301074;30032202 116905241 MODEL JAAIVD010000026;XM_032908067;XM_032908068 XP_032763958;XP_032763959 protein-coding 626072109 LOC116899168 cytochrome c oxidase assembly factor 7 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); genetic disease (ortholog); spinocerebellar ataxia with axonal neuropathy type 3 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 46519070 46530700 - 22301074;30032202 116899168 MODEL JAAIVD010000025;XM_032900738 XP_032756629 protein-coding 626072116 LOC116908644 myosin-3-like 9 46681128 46703508 + 22301074 116908644 MODEL JAAIVD010000002;XM_032911906 XP_032767797 protein-coding 626072158 Trim6 tripartite motif containing 6 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-beta (ortholog); cellular response to virus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 2 101409963 101437906 - 22301074 116893158 MODEL JAAIVD010000001;XM_032895075 XP_032750966 tripartite motif-containing protein 6 protein-coding 626072176 Tprg1l tumor protein p63 regulated 1 like ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); negative regulation of synaptic transmission (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); FOUND IN calyx of Held (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) 1 6559341 6562700 + 30032202 116892152 MODEL JAAIVD010000025;XM_032893651 XP_032749542 tumor protein p63-regulated gene 1-like protein protein-coding 626072184 Tet2 tet methylcytosine dioxygenase 2 ENCODES a protein that exhibits DNA 5-methylcytosine dioxygenase activity (ortholog); ferrous iron binding (ortholog); zinc ion binding (ortholog); INVOLVED IN chromosomal 5-methylcytosine DNA demethylation, oxidation pathway (ortholog); cytosine metabolic process (ortholog); hematopoietic stem cell homeostasis (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); breast cancer (ortholog) 3 25401084 25481014 + 30032202 116896229 MODEL JAAIVD010000012;XM_032897289;XM_032897290;XM_032897291 XP_032753180;XP_032753181;XP_032753182 methylcytosine dioxygenase TET2 protein-coding 626072206 Pde8a phosphodiesterase 8A ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-GMP phosphodiesterase activity (ortholog); kinase binding (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway 2 118921668 119044373 - 22301074;30032202 116893231 MODEL JAAIVD010000001;XM_032895106 XP_032750997 high affinity cAMP-specific and IBMX-insensitive 3',5'-cyclic phosphodiesterase 8A protein-coding 626072232 Tpst2 tyrosylprotein sulfotransferase 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-tyrosine sulfotransferase activity (ortholog); INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); peptidyl-tyrosine sulfation (ortholog); prevention of polyspermy (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi lumen (ortholog); trans-Golgi network (ortholog) 16 41659065 41699170 - 30032202 116885393 MODEL JAAIVD010000004;XM_032886673 XP_032742564 protein-tyrosine sulfotransferase 2 protein-coding 626072243 Poc5 POC5 centriolar protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN centriole elongation (ortholog); negative regulation of centriole elongation (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 3 200098380 200124359 - 30032202 116897276 MODEL JAAIVD010000012;XM_032899009 XP_032754900 centrosomal protein POC5 protein-coding 626072258 LOC116894645 vomeronasal type-2 receptor 26-like 2 199432818 199448029 + 22301074;30032202 116894645 MODEL JAAIVD010000001;XM_032896357 XP_032752248 protein-coding 626072265 Cnga3 cyclic nucleotide gated channel subunit alpha 3 ENCODES a protein that exhibits cadherin binding (ortholog); cGMP binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN inorganic cation import across plasma membrane (ortholog); membrane depolarization (ortholog); monoatomic cation transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); achromatopsia 2 (ortholog); FOUND IN axon initial segment (ortholog); cone photoreceptor outer segment (ortholog); dendrite (ortholog) 4 113421744 113463733 + 30032202 116898140 MODEL JAAIVD010000003;XM_032899516;XM_032899517;XM_032899518 XP_032755407;XP_032755408;XP_032755409 cyclic nucleotide-gated cation channel alpha-3 protein-coding 626072282 Plekhg6 pleckstrin homology and RhoGEF domain containing G6 FOUND IN cell junction (ortholog); centrosome (ortholog) 6 22524210 22540259 + 22301074;30032202 116903248 MODEL JAAIVD010000024;XM_032905627 XP_032761518 pleckstrin homology domain-containing family G member 6 protein-coding 626072299 LOC116896493 Golgi pH regulator 3 60403427 60440724 + 30032202 116896493 MODEL JAAIVD010000012;XM_032897669 XP_032753560 protein-coding 626072317 LOC116897346 uncharacterized LOC116897346 3 218475922 218530945 + 116897346 MODEL JAAIVD010000012;XR_004387419;XR_004387420;XR_004387421;XR_004387422 ncrna 626072329 LOC116901259 histo-blood group ABO system transferase 1 5 10105284 10129413 + 22301074;30032202 116901259 MODEL JAAIVD010000023;XM_032903016;XM_032903017 XP_032758907;XP_032758908 protein-coding 626072347 KEG97_r02 MT 70 1025 + 64988235 rrna 626072348 Cpz carboxypeptidase Z ASSOCIATED WITH Dwarfism (ortholog) 11 69545651 69568728 + 22301074 116912281 MODEL JAAIVD010000006;XM_032916277 XP_032772168 protein-coding 626072362 Erg ETS transcription factor ERG ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); leukemia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 49177961 49279179 + 22301074;30032202 116897966 MODEL JAAIVD010000003;XM_032899365 XP_032755256 transcriptional regulator ERG protein-coding 626072376 Gpr55 G protein-coupled receptor 55 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); INVOLVED IN bone resorption (ortholog); negative regulation of osteoclast differentiation (ortholog); phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); hyperglycemia (ortholog); Hypertriglyceridemia (ortholog); FOUND IN plasma membrane (ortholog) 4 158083894 158122506 - 22301074;30032202;31923454 116898248 MODEL JAAIVD010000003;XM_032899598 XP_032755489 G-protein coupled receptor 55 protein-coding 626072382 LOC116888887 germ cell-less protein-like 2 X 122523398 122524894 - 22301074;30032202 116888887 MODEL JAAIVD010000014;XM_032890150 XP_032746041 protein-coding 626072385 Vapa VAMP associated protein A ENCODES a protein that exhibits FFAT motif binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN ceramide transport (ortholog); cholesterol transport (ortholog); COPII-coated vesicle budding (ortholog); FOUND IN bicellular tight junction (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 4 175570746 175601634 - 22301074;30032202 116899694 MODEL JAAIVD010000003;XM_032901718 XP_032757609 vesicle-associated membrane protein-associated protein A protein-coding 626072395 LOC116883267 protein disulfide-isomerase TMX3-like 14 77303962 77304494 + 116883267 MODEL JAAIVD010000009 pseudo 626072396 LOC116886182 uncharacterized LOC116886182 17 2004902 2015051 + 116886182 MODEL JAAIVD010000011;XR_004386093 ncrna 626072401 LOC116894399 keratin-associated protein 20-2-like 2 157181448 157181594 + 116894399 MODEL JAAIVD010000001;XM_032896107 XP_032751998 protein-coding 626072404 Psmd10 proteasome 26S subunit, non-ATPase 10 INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); negative regulation of MAPK cascade (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) X 93370644 93378897 - 22301074 116888797 MODEL JAAIVD010000014;XM_032890078;XM_032890079 XP_032745969;XP_032745970 26S proteasome non-ATPase regulatory subunit 10 protein-coding 626072418 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889768 MODEL JAAIVD010000081 trna 626072419 LOC116893251 peptidyl-prolyl cis-trans isomerase A-like 2 132070599 132092419 + 116893251 MODEL JAAIVD010000001 pseudo 626072420 Aldh1a3 aldehyde dehydrogenase 1 family member A3 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); NAD+ binding (ortholog); INVOLVED IN embryonic camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); face development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); isolated microphthalmia 8 (ortholog); FOUND IN cytoplasm (ortholog) 2 133927003 133960515 + 22301074;30032202 116891993 MODEL JAAIVD010000001;XM_032893447 XP_032749338 aldehyde dehydrogenase family 1 member A3 protein-coding 626072437 LOC116890169 nucleosome assembly protein 1-like 1 1 256340177 256341365 + 22301074;30032202 116890169 MODEL JAAIVD010000025;XM_032890904 XP_032746795 protein-coding 626072442 LOC116895794 developmental pluripotency-associated protein 4-like 3 61158634 61159413 + 116895794 MODEL JAAIVD010000012 pseudo 626072443 LOC116889936 olfactory receptor 6C70-like 1 161133695 161134633 + 22301074;30032202 116889936 MODEL JAAIVD010000025;XM_032890746 XP_032746637 protein-coding 626072446 LOC116897591 small nucleolar RNA SNORA17 3 113924304 113924433 + 116897591 MODEL JAAIVD010000012;XR_004387594 snorna 626072449 Brwd1 bromodomain and WD repeat domain containing 1 INVOLVED IN cytoskeleton organization (ortholog); regulation of cell shape (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autistic disorder (ortholog); male infertility (ortholog); oligospermia (ortholog); FOUND IN axoneme (ortholog); cytosol (ortholog); motile cilium (ortholog) 4 48588598 48681872 + 22301074;30032202 116898955 MODEL JAAIVD010000003;XM_032900371 XP_032756262 bromodomain and WD repeat-containing protein 1 protein-coding 626072495 LOC116893902 putative protein T-ENOL 2 74918333 74921235 + 116893902 MODEL JAAIVD010000001;XM_032895626 XP_032751517 protein-coding 626072504 LOC116913990 prohibitin-like 12 29990709 29996880 + 22301074;30032202 116913990 MODEL JAAIVD010000007;XM_032918265 XP_032774156 protein-coding 626072508 LOC116904870 cytosolic 5'-nucleotidase 1B 7 30521676 30538984 + 22301074;30032202 116904870 MODEL JAAIVD010000026;XM_032907461;XM_032907462;XM_032907463;XM_032907464;XM_032907465;XM_032907467;XM_032907468;XM_032907469 XP_032763352;XP_032763353;XP_032763354;XP_032763355;XP_032763356;XP_032763358;XP_032763359;XP_032763360 protein-coding 626072536 Cdc42ep5 CDC42 effector protein 5 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN JNK cascade (ortholog); positive regulation of actin filament polymerization (ortholog); positive regulation of pseudopodium assembly (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 176661808 176664018 - 116892643 MODEL JAAIVD010000001;XM_032894464;XM_032894465;XM_032894466 XP_032750355;XP_032750356;XP_032750357 protein-coding 626072549 LOC116900533 olfactory receptor 4F6-like 5 89492536 89493474 - 22301074 116900533 MODEL JAAIVD010000023;XM_032902260 XP_032758151 protein-coding 626072552 Hoxd3 homeobox D3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); cartilage development (ortholog); cell-matrix adhesion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN aggresome (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 5 52069979 52089147 + 22301074;30032202 116901529 MODEL JAAIVD010000023;XM_032903510 XP_032759401 homeobox protein Hox-D3 protein-coding 626072559 Sox4 SRY-box transcription factor 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN ascending aorta morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); cardiac right ventricle morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Asphyxia (ortholog); basal cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 14 48012657 48017529 - 30032202 116883370 MODEL JAAIVD010000009;XM_032884485 XP_032740376 transcription factor SOX-4 protein-coding 626072564 LOC116893385 RNA-binding motif protein, X chromosome-like 2 168939321 168945795 + 22301074 116893385 MODEL JAAIVD010000001;XM_032895180 XP_032751071 protein-coding 626072569 LOC116890229 DNA methyltransferase 1-associated protein 1-like 1 270467584 270468941 - 116890229 MODEL JAAIVD010000025 pseudo 626072570 Dzip1 DAZ interacting zinc finger protein 1 ENCODES a protein that exhibits BBSome binding (ortholog); molecular adaptor activity (ortholog); protein sequestering activity (ortholog); INVOLVED IN ciliary basal body organization (ortholog); cilium assembly (ortholog); cilium organization (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 61 (ortholog); mitral valve prolapse (ortholog); Myxomatous Mitral Valve Prolapse 3 (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 12 6986080 7038874 + 30032202 116913292 MODEL JAAIVD010000007;XM_032917418 XP_032773309 zinc finger protein DZIP1 protein-coding 626072597 LOC116914918 cyclin-dependent kinase 4-like 13 67371218 67372084 - 116914918 MODEL JAAIVD010000008 pseudo 626072598 LOC116883931 gap junction delta-4 protein-like 14 9756595 9759142 - 116883931 MODEL JAAIVD010000009 pseudo 626072599 Ebp EBP cholestenol delta-isomerase ENCODES a protein that exhibits C-8 sterol isomerase activity (ortholog); cholestenol delta-isomerase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH chondrodysplasia punctata (ortholog); connective tissue disease (ortholog); Developmental Disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nuclear envelope (ortholog) X 15598840 15603227 - 30032202 116888454 MODEL JAAIVD010000014;XM_032889734 XP_032745625 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase protein-coding 626072607 LOC116887380 zinc finger protein 280B-like 18 11405559 11417973 - 30032202 116887380 MODEL JAAIVD010000013;XM_032888976 XP_032744867 protein-coding 626072614 LOC116890586 small nucleolar RNA SNORA17 1 31449505 31449628 + 116890586 MODEL JAAIVD010000025 pseudo 626072615 LOC116890418 U7 small nuclear RNA 1 229671065 229671128 - 116890418 MODEL JAAIVD010000025;XR_004386618 snrna 626072618 Cst6 cystatin E/M INVOLVED IN epidermis development (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 4B (ortholog); Breast Neoplasms (ortholog); ectodermal dysplasia 15 (ortholog); FOUND IN cornified envelope (ortholog) 2 2323850 2325482 + 22301074;30032202 116890728 MODEL JAAIVD010000001;XM_032891185 XP_032747076 cystatin-M protein-coding 626072625 Usp35 ubiquitin specific peptidase 35 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog) 2 95634740 95658393 - 22301074;30032202 116891692 MODEL JAAIVD010000001;XM_032892958 XP_032748849 ubiquitin carboxyl-terminal hydrolase 35 protein-coding 626072640 LOC116887711 ubiquitin carboxyl-terminal hydrolase 15-like 1 55617237 55619060 + 116887711 MODEL JAAIVD010000025 pseudo 626072641 LOC116906634 60S ribosomal protein L32-like 8 27011858 27012262 - 22301074;30032202 116906634 MODEL JAAIVD010000027;XM_032909395 XP_032765286 protein-coding 626072644 LOC116905559 thyroid hormone receptor-associated protein 3-like 7 51341000 51345683 + 116905559 MODEL JAAIVD010000026 pseudo 626072645 LOC116908421 small nucleolar RNA SNORA17 8 80751769 80751859 + 116908421 MODEL JAAIVD010000027 pseudo 626072646 LOC116915029 glyceraldehyde-3-phosphate dehydrogenase-like 13 31600985 31601541 + 116915029 MODEL JAAIVD010000008 pseudo 626072647 Tsga13 testis specific 13 6 108671879 108695238 + 116902906 MODEL JAAIVD010000024;XM_032905231 XP_032761122 testis-specific gene 13 protein protein-coding 626072659 LOC116887845 dystrophin-like X 40937907 40952168 - 30032202 116887845 MODEL JAAIVD010000014;XM_032889352 XP_032745243 protein-coding 626072665 LOC116909216 60S ribosomal protein L3-like 9 3339660 3340608 - 116909216 MODEL JAAIVD010000002 pseudo 626072666 Dnaja4 DnaJ heat shock protein family (Hsp40) member A4 ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of endothelial cell migration (ortholog); negative regulation of inclusion body assembly (ortholog); positive regulation of gene expression (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 8 48766817 48784016 + 22301074;30032202 116906629 MODEL JAAIVD010000027;XM_032909386 XP_032765277 dnaJ homolog subfamily A member 4 protein-coding 626072678 LOC116909287 olfactory receptor 2Y1-like 9 32046734 32047663 + 22301074 116909287 MODEL JAAIVD010000002;XM_032912825 XP_032768716 protein-coding 626072681 LOC116896022 microfibrillar-associated protein 1A-like 3 181542395 181549897 + 116896022 MODEL JAAIVD010000012 pseudo 626072682 Fpgt fucose-1-phosphate guanylyltransferase ENCODES a protein that exhibits fucose-1-phosphate guanylyltransferase activity (ortholog); INVOLVED IN GDP-L-fucose salvage (ortholog); L-fucose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH renal cell carcinoma (ortholog) 3 6356342 6365216 + 22301074 116896137 MODEL JAAIVD010000012;XM_032897121 XP_032753012 protein-coding 626072690 LOC116901025 ankyrin repeat domain-containing protein 40-like 5 129597894 129599034 + 116901025 MODEL JAAIVD010000023 pseudo 626072691 LOC116899723 putative KRAB domain-containing protein ZNF788 4 182305357 182307062 + 22301074 116899723 MODEL JAAIVD010000003;XM_032901763 XP_032757654 protein-coding 626072695 LOC116893651 membrane-spanning 4-domains subfamily A member 4D-like 2 10979949 10988705 + 22301074;30032202 116893651 MODEL JAAIVD010000001;XM_032895368 XP_032751259 protein-coding 626072703 Rab3gap1 RAB3 GTPase activating protein catalytic subunit 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN brain development (ortholog); camera-type eye development (ortholog); establishment of protein localization to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cryptorchidism (ortholog); genetic disease (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum tubular network (ortholog); excitatory synapse (ortholog) 10 7776621 7847143 - 30032202 116911558 MODEL JAAIVD010000005;XM_032915549 XP_032771440 rab3 GTPase-activating protein catalytic subunit protein-coding 626072731 Enpep glutamyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); metalloaminopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); angiotensin maturation (ortholog); cell migration (ortholog); PARTICIPATES IN angiotensin III signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH autistic disorder (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border (ortholog) 3 29982786 30054398 + 22301074;30032202 116896268 MODEL JAAIVD010000012;XM_032897345 XP_032753236 protein-coding 626072755 Npc1l1 NPC1 like intracellular cholesterol transporter 1 ENCODES a protein that exhibits cholesterol binding (ortholog); heterocyclic compound binding (ortholog); myosin V binding (ortholog); INVOLVED IN cellular response to sterol depletion (ortholog); cholesterol biosynthetic process (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Experimental Diabetes Mellitus (ortholog); Hypercholesterolemia (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 11 75140763 75160049 - 22301074 116912753 MODEL JAAIVD010000006;XM_032916899 XP_032772790 NPC1-like intracellular cholesterol transporter 1 protein-coding 626072778 Pxmp2 peroxisomal membrane protein 2 FOUND IN cytoplasm (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) 16 44072570 44082958 + 22301074;30032202 116885627 MODEL JAAIVD010000004;XM_032886929 XP_032742820 protein-coding 626072787 Ankzf1 ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1 ENCODES a protein that exhibits catalytic activity, acting on a tRNA (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); rescue of stalled ribosome (ortholog); FOUND IN cytoplasm (ortholog) 4 148550811 148557782 + 22301074 116899524 MODEL JAAIVD010000003;XM_032901390;XM_032901391;XR_004387732 XP_032757281;XP_032757282 ankyrin repeat and zinc finger domain-containing protein 1 protein-coding 626072809 Ankrd37 ankyrin repeat domain 37 FOUND IN cytoplasm (ortholog); cytosol (ortholog); male germ cell nucleus (ortholog) 13 41894618 41897642 + 22301074 116914615 MODEL JAAIVD010000008;XM_032918977 XP_032774868 ankyrin repeat domain-containing protein 37 protein-coding 626072818 Msh5 mutS homolog 5 INVOLVED IN female gamete generation (ortholog); homologous chromosome pairing at meiosis (ortholog); meiosis I (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN synaptonemal complex (ortholog) 18 7628436 7644796 - 22301074;30032202 116887187 MODEL JAAIVD010000013;XM_032888742 XP_032744633 mutS protein homolog 5 protein-coding 626072846 LOC116886814 nuclear speckle splicing regulatory protein 1-like 18 43509117 43510695 - 116886814 MODEL JAAIVD010000013 pseudo 626072847 Hcn1 hyperpolarization activated cyclic nucleotide gated potassium channel 1 ENCODES a protein that exhibits cAMP binding (ortholog); identical protein binding (ortholog); intracellular cAMP-activated cation channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN apical protein localization (ortholog); cellular response to cAMP (ortholog); cellular response to interferon-beta (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); anxiety disorder (ortholog); Ataxia (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); axon terminus (ortholog) 3 178749543 179125543 - 22301074 116897174 MODEL JAAIVD010000012;XM_032898859 XP_032754750 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 protein-coding 626072859 LOC116912065 uncharacterized LOC116912065 1 236923013 237036472 + 116912065 MODEL JAAIVD010000025;XR_004389419 ncrna 626072865 Tmsb15a thymosin beta 15A INVOLVED IN positive regulation of cell migration (ortholog) X 87801050 87802155 + 22301074;30032202 116889216 MODEL JAAIVD010000014;XM_032890366 XP_032746257 thymosin beta-15A protein-coding 626072869 LOC116890151 barrier-to-autointegration factor-like 1 250290786 250291088 + 116890151 MODEL JAAIVD010000025 pseudo 626072870 LOC116895111 U2 spliceosomal RNA 2 203881887 203881984 - 116895111 MODEL JAAIVD010000001 pseudo 626072871 Gcnt2 glucosaminyl (N-acetyl) transferase 2 (I blood group) ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN maintenance of lens transparency (ortholog); negative regulation of cell-substrate adhesion (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 13 with adult i phenotype (ortholog); genetic disease (ortholog) 14 59880837 59882009 + 22301074;30032202 116883345 MODEL JAAIVD010000009;XM_032884422 XP_032740313 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase protein-coding 626072875 Foxi3 forkhead box I3 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN epidermal cell fate specification (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH Clouston syndrome (ortholog); Craniofacial Microsomia 2 (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 6 73958448 73963064 + 30032202 116902774 MODEL JAAIVD010000024;XM_032905117 XP_032761008 forkhead box protein I3 protein-coding 626072879 LOC116896732 uncharacterized LOC116896732 3 68118518 68209080 + 116896732 MODEL JAAIVD010000012;XR_004387362;XR_004387363 ncrna 626072888 Lrrc31 leucine rich repeat containing 31 3 124900771 124924854 - 22301074 116896976 MODEL JAAIVD010000012;XM_032898557 XP_032754448 leucine-rich repeat-containing protein 31 protein-coding 626072901 LOC116898508 neurobeachin-like protein 1 4 132377288 132414127 - 30032202 116898508 MODEL JAAIVD010000003;XM_032899739 XP_032755630 protein-coding 626072917 Trnar-ucu transfer RNA arginine (anticodon UCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 52421497 52421570 + 116911909 MODEL JAAIVD010000005 trna 626072918 Slc41a3 solute carrier family 41 member 3 ENCODES a protein that exhibits magnesium:sodium antiporter activity (ortholog); INVOLVED IN mitochondrial magnesium ion transmembrane transport (ortholog); FOUND IN mitochondrial inner membrane (ortholog); plasma membrane (ortholog) 6 56270527 56305516 - 22301074;30032202 116903506 MODEL JAAIVD010000024;XM_032906109;XM_032906110 XP_032762000;XP_032762001 protein-coding 626072935 Col7a1 collagen type VII alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN collagen fibril organization (ortholog); endodermal cell differentiation (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH amelogenesis imperfecta (ortholog); autosomal dominant dystrophic epidermolysis bullosa (ortholog); Breast Neoplasms (ortholog); FOUND IN basement membrane (ortholog) 8 100230420 100260892 + 22301074 116907821 MODEL JAAIVD010000027;XM_032911002 XP_032766893 collagen alpha-1(VII) chain protein-coding 626073056 LOC116887590 serine/threonine-protein kinase 19-like 18 7235880 7237719 - 30032202 116887590 MODEL JAAIVD010000013;XM_032889214 XP_032745105 protein-coding 626073063 Riok2 RIO kinase 2 INVOLVED IN maturation of SSU-rRNA (ortholog); positive regulation of ribosomal small subunit export from nucleus (ortholog); positive regulation of rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN cytoplasm (ortholog); preribosome, small subunit precursor (ortholog) 2 101273901 101290454 - 22301074;30032202 116891792 MODEL JAAIVD010000001;XM_032893144 XP_032749035 serine/threonine-protein kinase RIO2 protein-coding 626073077 Mmel1 membrane metalloendopeptidase like 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH primary biliary cholangitis (ortholog); rheumatoid arthritis (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 1 5819744 5847326 - 22301074;30032202 116892103 MODEL JAAIVD010000025;XM_032893584 XP_032749475 membrane metallo-endopeptidase-like 1 protein-coding 626073103 LOC116894715 keratin-associated protein 20-2-like 2 157233074 157233232 + 116894715 MODEL JAAIVD010000001;XM_032896413 XP_032752304 protein-coding 626073106 Tube1 tubulin epsilon 1 18 38941840 38959729 + 22301074;30032202 116887233 MODEL JAAIVD010000013;XM_032888793 XP_032744684 tubulin epsilon chain protein-coding 626073122 Smtnl2 smoothelin like 2 9 43106475 43127346 + 30032202 116908946 MODEL JAAIVD010000002;XM_032912403 XP_032768294 smoothelin-like protein 2 protein-coding 626073134 Unc119 unc-119 lipid binding chaperone ENCODES a protein that exhibits lipid binding (ortholog); INVOLVED IN lipoprotein transport (ortholog); mitotic cytokinesis (ortholog); negative regulation of caveolin-mediated endocytosis (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 24 (ortholog); idiopathic CD4-positive T-lymphocytopenia (ortholog); FOUND IN centrosome (ortholog); intercellular bridge (ortholog); spindle midzone (ortholog) 9 92090088 92095585 - 30032202 116909935 MODEL JAAIVD010000002;XM_032913709 XP_032769600 protein unc-119 homolog A protein-coding 626073143 LOC116907200 40S ribosomal protein S7-like 8 4079924 4080269 + 116907200 MODEL JAAIVD010000027 pseudo 626073144 LOC116896147 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5-like 3 8640025 8760577 + 116896147 MODEL JAAIVD010000012;XM_032897131;XM_032897132 XP_032753022;XP_032753023 protein-coding 626073156 Susd6 sushi domain containing 6 INVOLVED IN DNA damage response (ortholog) 7 95036842 95097909 + 116905228 MODEL JAAIVD010000026;XM_032908043 XP_032763934 sushi domain-containing protein 6 protein-coding 626073166 Slc5a8 solute carrier family 5 member 8 ENCODES a protein that exhibits lactate transmembrane transporter activity (ortholog); monocarboxylate:sodium symporter activity (ortholog); nicotinate transmembrane transporter activity (ortholog); INVOLVED IN acetate transport (ortholog); chloride transport (ortholog); iodide transport (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH Colonic Neoplasms (ortholog); hyperuricemia (ortholog); FOUND IN apical plasma membrane (ortholog); GINS complex (ortholog) 1 167928125 167969162 + 22301074;30032202 116907820 MODEL JAAIVD010000025;XM_032911004 XP_032766895 sodium-coupled monocarboxylate transporter 1 protein-coding 626073185 LOC116906497 5S ribosomal RNA 7 89929819 89929933 - 116906497 MODEL JAAIVD010000026 pseudo 626073186 LOC116890331 U6 spliceosomal RNA 1 3308170 3308279 + 116890331 MODEL JAAIVD010000025;XR_004386554 snrna 626073189 LOC116894084 olfactory receptor 52E4-like 2 103199689 103202717 + 22301074 116894084 MODEL JAAIVD010000001;XM_032895804;XM_032895805 XP_032751695;XP_032751696 protein-coding 626073196 LOC116906404 small nucleolar RNA SNORD113/SNORD114 family 7 127271281 127271346 + 116906404 MODEL JAAIVD010000026 pseudo 626073197 Morf4l2 mortality factor 4 like 2 INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of striated muscle cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 88489795 88499828 - 22301074;30032202 116888408 MODEL JAAIVD010000014;XM_032889681;XM_032889682;XM_032889683;XM_032889684 XP_032745572;XP_032745573;XP_032745574;XP_032745575 mortality factor 4-like protein 2 protein-coding 626073210 LOC116893884 protein BEX1-like 2 72671502 72672700 - 116893884 MODEL JAAIVD010000001 pseudo 626073211 LOC116885877 protein LYRIC-like 1 214830875 214838021 - 116885877 MODEL JAAIVD010000025 pseudo 626073212 LOC116909458 olfactory receptor 2Y1-like 9 32151245 32152181 + 116909458 MODEL JAAIVD010000002 pseudo 626073213 LOC116896027 prefoldin subunit 2-like 3 183300059 183315217 - 116896027 MODEL JAAIVD010000012 pseudo 626073214 LOC116893850 olfactory receptor 13A1-like 2 61317577 61318521 - 22301074 116893850 MODEL JAAIVD010000001;XM_032895570 XP_032751461 protein-coding 626073218 LOC116913035 U4 spliceosomal RNA 11 96103761 96103874 - 116913035 MODEL JAAIVD010000006 pseudo 626073219 Sstr5 somatostatin receptor 5 ENCODES a protein that exhibits somatostatin receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to glucocorticoid stimulus (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN bipolar disorder pathway; ASSOCIATED WITH bipolar disorder (ortholog); Experimental Diabetes Mellitus (ortholog); status epilepticus (ortholog); FOUND IN plasma membrane (ortholog) 9 2753678 2760566 - 22301074;30032202 116909359 MODEL JAAIVD010000002;XM_032912907 XP_032768798 somatostatin receptor type 5 protein-coding 626073225 Igsf10 immunoglobulin superfamily member 10 INVOLVED IN ossification (ortholog); regulation of neuron migration (ortholog); tissue regeneration (ortholog); ASSOCIATED WITH Martsolf syndrome 1 (ortholog); Primary Ovarian Failure (ortholog); primary ovarian insufficiency (ortholog); FOUND IN extracellular region (ortholog) 3 95559380 95588155 + 22301074 116896843 MODEL JAAIVD010000012;XM_032898348 XP_032754239 protein-coding 626073237 LOC116913062 cytochrome b-c1 complex subunit 7-like 12 41285544 41285873 - 116913062 MODEL JAAIVD010000007 pseudo 626073238 Adgrl1 adhesion G protein-coupled receptor L1 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); G protein-coupled receptor activity (ortholog); latrotoxin receptor activity (ortholog); INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); DEVELOPMENTAL DELAY, BEHAVIORAL ABNORMALITIES, AND NEUROPSYCHIATRIC DISORDERS (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); growth cone (ortholog) 17 16334661 16376281 - 22301074;30032202 116886575 MODEL JAAIVD010000011;XM_032888095;XM_032888096;XM_032888097;XM_032888098;XM_032888099;XM_032888100;XM_032888101;XM_032888102;XM_032888103;XM_032888104;XM_032888105 XP_032743986;XP_032743987;XP_032743988;XP_032743989;XP_032743990;XP_032743991;XP_032743992;XP_032743993;XP_032743994;XP_032743995;XP_032743996 protein-coding 626073289 LOC116886816 MICOS complex subunit Mic10-like 18 15536117 15536413 - 22301074;30032202 116886816 MODEL JAAIVD010000013;XM_032888244 XP_032744135 protein-coding 626073293 Ufsp2 UFM1 specific peptidase 2 ENCODES a protein that exhibits deUFMylase activity (ortholog); INVOLVED IN negative regulation of proteolysis involved in protein catabolic process (ortholog); proteolysis (ortholog); regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH Beukes hip dysplasia (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 106 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 13 41897687 41916540 - 116914414 MODEL JAAIVD010000008;XM_032918672;XM_032918673;XM_032918674 XP_032774563;XP_032774564;XP_032774565 ufm1-specific protease 2 protein-coding 626073314 Tmc5 transmembrane channel like 5 2 82980350 83032952 - 30032202 116891608 MODEL JAAIVD010000001;XM_032892807;XM_032892808 XP_032748698;XP_032748699 transmembrane channel-like protein 5 protein-coding 626073341 LOC116891240 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 2 45706611 45707761 + 116891240 MODEL JAAIVD010000001 pseudo 626073342 Rere arginine-glutamic acid dipeptide repeats ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN branching morphogenesis of a nerve (ortholog); cerebellar granule cell precursor proliferation (ortholog); cerebellar Purkinje cell layer maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cerebral Visual Impairment and Intellectual Disability (ortholog); cleft palate (ortholog); FOUND IN histone deacetylase complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 10133598 10467723 - 22301074;30032202 116892476 MODEL JAAIVD010000025;XM_032894206;XM_032894213;XM_032894222;XM_032894231;XM_032894239;XM_032894248;XM_032894256 XP_032750097;XP_032750104;XP_032750113;XP_032750122;XP_032750130;XP_032750139;XP_032750147 arginine-glutamic acid dipeptide repeats protein protein-coding 626073383 LOC116904409 T-cell receptor beta chain V region C5-like 6 98819239 98822392 - 116904409 MODEL JAAIVD010000024 pseudo 626073384 Bicd1 BICD cargo adaptor 1 ENCODES a protein that exhibits cytoskeletal anchor activity (ortholog); dynactin binding (ortholog); dynein complex binding (ortholog); INVOLVED IN microtubule anchoring at microtubule organizing center (ortholog); minus-end-directed organelle transport along microtubule (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); cytoplasmic vesicle (ortholog) 6 7127692 7268064 + 22301074;30032202 116903121 MODEL JAAIVD010000024;XM_032905463;XM_032905464;XM_032905465;XM_032905466;XM_032905467;XM_032905468;XM_032905469;XM_032905470;XM_032905471;XM_032905472;XM_032905473;XM_032905474 XP_032761354;XP_032761355;XP_032761356;XP_032761357;XP_032761358;XP_032761359;XP_032761360;XP_032761361;XP_032761362;XP_032761363;XP_032761364;XP_032761365 protein bicaudal D homolog 1 protein-coding 626073424 LOC116904910 ragulator complex protein LAMTOR4-like 7 37941836 37942726 - 116904910 MODEL JAAIVD010000026 pseudo 626073425 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60838439 60838510 - 116897683 MODEL JAAIVD010000012 trna 626073426 Rccd1 RCC1 domain containing 1 ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 119925927 119931616 + 116891922 MODEL JAAIVD010000001;XM_032893355 XP_032749246 RCC1 domain-containing protein 1 protein-coding 626073437 Pde6c phosphodiesterase 6C INVOLVED IN phototransduction, visible light (ortholog); retinal cone cell development (ortholog); sensory perception of light stimulus (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH achromatopsia (ortholog); Achromatopsia 1 (ortholog); Achromatopsia 5 (ortholog) 2 35570721 35627155 - 22301074;30032202 116893785 MODEL JAAIVD010000001;XM_032895485;XM_032895486;XM_032895487 XP_032751376;XP_032751377;XP_032751378 cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' protein-coding 626073466 Hgf hepatocyte growth factor ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); cell morphogenesis (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); PARTICIPATES IN E-cadherin signaling pathway; fibroblast growth factor signaling pathway; scatter factor/hepatocyte growth factor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); acute myeloid leukemia (ortholog); adult-onset Still's disease (ortholog); FOUND IN extracellular space (ortholog) 6 146163423 146232445 + 22301074;30032202 116904158 MODEL D14341;JAAIVD010000024;XM_032907055;XM_032907056 BAA03275;XP_032762946;XP_032762947 protein-coding 626073492 LOC116893075 tRNA dimethylallyltransferase-like 2 43031535 43038652 - 116893075 MODEL JAAIVD010000001 pseudo 626073493 Top3b DNA topoisomerase III beta ENCODES a protein that exhibits RNA topoisomerase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); FOUND IN condensed chromosome (ortholog); DNA topoisomerase III-beta-TDRD3 complex (ortholog); nucleus (ortholog) 4 2155300 2185805 + 22301074;30032202 116898619 MODEL JAAIVD010000003;XM_032899828 XP_032755719 DNA topoisomerase 3-beta-1 protein-coding 626073515 LOC116908097 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 2-like 1 169966821 169967104 - 116908097 MODEL JAAIVD010000025 pseudo 626073516 Bst1 bone marrow stromal cell antigen 1 ENCODES a protein that exhibits NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); regulation of actin cytoskeleton organization (ortholog); regulation of calcium-mediated signaling (ortholog); PARTICIPATES IN ADP-ribosylation pathway, cyclic ribosylation; niacin metabolic pathway; ASSOCIATED WITH lung disease (ortholog); Parkinson's disease (ortholog); FOUND IN plasma membrane (ortholog); uropod (ortholog) 11 61925367 61941084 - 22301074;30032202 116912315 MODEL JAAIVD010000006;XM_032916334 XP_032772225 ADP-ribosyl cyclase/cyclic ADP-ribose hydrolase 2 protein-coding 626073527 Cxadr CXADR cell adhesion molecule ENCODES a protein that exhibits beta-catenin binding (ortholog); cell adhesion molecule binding (ortholog); connexin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); AV node cell to bundle of His cell communication (ortholog); AV node cell-bundle of His cell adhesion involved in cell communication (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apicolateral plasma membrane (ortholog) 4 63727040 63742827 - 30032202 116899045 MODEL JAAIVD010000003;XM_032900513;XM_032900514 XP_032756404;XP_032756405 CXADR Ig-like cell adhesion molecule;coxsackievirus and adenovirus receptor protein-coding 626073539 Fam136a family with sequence similarity 136 member A ASSOCIATED WITH Meniere's disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 6 59937046 59942779 - 30032202 116903556 MODEL JAAIVD010000024;XM_032906173 XP_032762064 protein FAM136A protein-coding 626073546 LOC116902541 small Cajal body-specific RNA 4 5 115974621 115974748 - 116902541 MODEL JAAIVD010000023;XR_004388144 ncrna 626073549 Pcnx2 pecanex 2 17 45268262 45418937 - 22301074 116886113 MODEL JAAIVD010000011;XM_032887445 XP_032743336 pecanex-like protein 2 protein-coding 626073587 LOC116900033 N-acetyllactosaminide alpha-1,3-galactosyltransferase-like 5 245085 256257 + 22301074;30032202 116900033 MODEL JAAIVD010000023;XM_032901829 XP_032757720 protein-coding 626073594 LOC116890978 60S ribosomal protein L6-like 2 10703213 10704293 + 116890978 MODEL JAAIVD010000001 pseudo 626073595 Echs1 enoyl-CoA hydratase, short chain 1 ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid beta-oxidation (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog) 2 61755320 61764170 + 30032202 116891350 MODEL JAAIVD010000001;XM_032892342 XP_032748233 enoyl-CoA hydratase, mitochondrial protein-coding 626073607 Mme membrane metalloendopeptidase ENCODES a protein that exhibits cardiolipin binding (ortholog); endopeptidase activity (ortholog); exopeptidase activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; kallikrein-kinin cascade pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Breast Neoplasms (ortholog); cerebellar ataxia type 43 (ortholog); FOUND IN axon (ortholog); brush border (ortholog); centrosome (ortholog) 3 91838915 91949210 - 22301074;30032202 116896828 MODEL JAAIVD010000012;XM_032898307;XM_032898308;XM_032898309;XM_032898310 XP_032754198;XP_032754199;XP_032754200;XP_032754201 neprilysin protein-coding 626073645 Hibch 3-hydroxyisobutyryl-CoA hydrolase ENCODES a protein that exhibits 3-hydroxyisobutyryl-CoA hydrolase activity (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxyisobutryl-CoA hydrolase deficiency (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrion (ortholog) 4 122324443 122489080 - 30032202 116898495 MODEL JAAIVD010000003;XM_032899734 XP_032755625 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial protein-coding 626073662 Glp1r glucagon like peptide 1 receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); glucagon-like peptide 1 receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); associative learning (ortholog); cAMP/PKA signal transduction (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH disease of cellular proliferation (ortholog); Experimental Diabetes Mellitus (ortholog); glucose intolerance (ortholog); FOUND IN plasma membrane (ortholog) 18 2937933 2974356 - 22301074;30032202 116887135 MODEL JAAIVD010000013;XM_032888683 XP_032744574 glucagon-like peptide 1 receptor protein-coding 626073678 LOC116910457 olfactory receptor 1D2-like 9 33695363 33696304 + 22301074;30032202 116910457 MODEL JAAIVD010000002;XM_032914323 XP_032770214 protein-coding 626073681 LOC116893589 60S ribosomal protein L7a-like 2 108837555 108838352 + 116893589 MODEL JAAIVD010000001 pseudo 626073682 Pnpo pyridoxamine 5'-phosphate oxidase ENCODES a protein that exhibits FMN binding (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN pyridoxal phosphate biosynthetic process (ortholog); pyridoxal phosphate metabolic process (ortholog); pyridoxamine metabolic process (ortholog); PARTICIPATES IN hypophosphatasia pathway; vitamin B6 metabolic pathway; ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 9 57441901 57446949 + 22301074;30032202 116908665 MODEL JAAIVD010000002;XM_032911950 XP_032767841 pyridoxine-5'-phosphate oxidase protein-coding 626073693 Gchfr GTP cyclohydrolase I feedback regulator ENCODES a protein that exhibits amino acid binding (ortholog); enzyme inhibitor activity (ortholog); GTP cyclohydrolase binding (ortholog); INVOLVED IN negative regulation of small molecule metabolic process (ortholog); protein-containing complex assembly (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); intracellular protein-containing complex (ortholog) 5 97346176 97350733 + 22301074;30032202 116901801 MODEL JAAIVD010000023;XM_032903960 XP_032759851 GTP cyclohydrolase 1 feedback regulatory protein protein-coding 626073700 LOC116894222 trace amine-associated receptor 8b-like 2 106781105 106783734 + 22301074;30032202 116894222 MODEL JAAIVD010000001;XM_032895933 XP_032751824 protein-coding 626073705 LOC116893890 integrin alpha-M 2 73807010 73851035 - 22301074;30032202 116893890 MODEL JAAIVD010000001;XM_032895610 XP_032751501 protein-coding 626073739 Pcp4 Purkinje cell protein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); calmodulin binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); negative regulation of neuron apoptotic process (ortholog); negative regulation of protein kinase activity (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Experimental Mammary Neoplasms (ortholog); Huntington's disease (ortholog); FOUND IN axon (ortholog); neurofilament (ortholog); protein-containing complex (ortholog) 4 48141731 48201218 - 30032202 116898946 MODEL JAAIVD010000003;XM_032900362 XP_032756253 calmodulin regulator protein PCP4 protein-coding 626073746 LOC116883259 corepressor interacting with RBPJ 1-like 14 74520797 74536968 - 30032202 116883259 MODEL JAAIVD010000009;XM_032884254 XP_032740145 protein-coding 626073752 Adra2a adrenoceptor alpha 2A ENCODES a protein that exhibits adrenergic receptor activity (ortholog); alpha-1B adrenergic receptor binding (ortholog); alpha-2C adrenergic receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol dependence (ortholog); anxiety disorder (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); dopaminergic synapse (ortholog) 2 53477235 53481272 + 22301074;30032202 116891293 MODEL JAAIVD010000001;XM_032892203 XP_032748094 alpha-2A adrenergic receptor protein-coding 626073758 LOC116904410 cell division control protein 42 homolog 6 98826634 98827350 - 116904410 MODEL JAAIVD010000024 pseudo 626073759 Pltp phospholipid transfer protein ENCODES a protein that exhibits ceramide binding (ortholog); cerebroside transfer activity (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN ceramide transport (ortholog); flagellated sperm motility (ortholog); glycolipid transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH atherosclerosis (ortholog); Coronary Disease (ortholog); dry eye syndrome (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); high-density lipoprotein particle (ortholog) 5 153101450 153120058 + 22301074;30032202 116902345 MODEL JAAIVD010000023;XM_032904828 XP_032760719 protein-coding 626073779 Kcnd3 potassium voltage-gated channel subfamily D member 3 ENCODES a protein that exhibits A-type (transient outward) potassium channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cell communication involved in cardiac conduction (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome (ortholog); Brugada syndrome 9 (ortholog); FOUND IN caveola (ortholog); dendrite (ortholog); GABA-ergic synapse (ortholog) 3 52458161 52673860 - 22301074;30032202 116896420 MODEL JAAIVD010000012;XM_032897565;XM_032897566 XP_032753456;XP_032753457 protein-coding 626073794 LOC116903028 60S ribosomal protein L34-like 6 158343441 158343838 - 116903028 MODEL JAAIVD010000024 pseudo 626073795 LOC116884090 small nucleolar RNA SNORA17 14 18878685 18878807 + 116884090 MODEL JAAIVD010000009 pseudo 626073796 LOC116915170 U6 spliceosomal RNA 13 22921997 22922116 + 116915170 MODEL JAAIVD010000008 pseudo 626073797 LOC116902666 U6 spliceosomal RNA 5 104207128 104207234 - 116902666 MODEL JAAIVD010000023;XR_004388228 snrna 626073800 Psmb4 proteasome 20S subunit beta 4 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN negative regulation of inflammatory response to antigenic stimulus (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog); proteosome-associated autoinflammatory syndrome 3 (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 3 62368058 62370782 + 22301074 116896579 MODEL JAAIVD010000012;XM_032897799 XP_032753690 proteasome subunit beta type-4 protein-coding 626073811 LOC116913577 granzyme E-like 12 68863775 68866767 + 22301074;30032202 116913577 MODEL JAAIVD010000007;XM_032917795;XM_032917796 XP_032773686;XP_032773687 protein-coding 626073822 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48657626 48657697 - 116910837 MODEL JAAIVD010000002 trna 626073823 LOC116903033 putative vomeronasal receptor-like protein 4 6 159272268 159273206 - 116903033 MODEL JAAIVD010000024 pseudo 626073824 LOC116913707 olfactory receptor 1537-like 12 342012 342950 - 22301074;30032202 116913707 MODEL JAAIVD010000007;XM_032918003 XP_032773894 protein-coding 626073828 Tmem139 transmembrane protein 139 ASSOCIATED WITH Neoplasm Invasiveness (ortholog) 6 97955361 97957732 - 116903898 MODEL JAAIVD010000024;XM_032906664;XM_032906665;XM_032906666 XP_032762555;XP_032762556;XP_032762557 protein-coding 626073840 LOC116910510 60S ribosomal protein L7a-like 9 3284086 3284870 + 116910510 MODEL JAAIVD010000002 pseudo 626073841 LOC116909088 non-histone chromosomal protein HMG-14-like 9 95431673 95431927 - 116909088 MODEL JAAIVD010000002 pseudo 626073842 LOC116885939 uncharacterized LOC116885939 16 44385937 44387237 + 116885939 MODEL JAAIVD010000004;XR_004386049 ncrna 626073846 Ap5m1 adaptor related protein complex 5 subunit mu 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog); cytosol (ortholog); late endosome (ortholog) 12 73962491 73984988 - 30032202 116913882 MODEL JAAIVD010000007;XM_032918171 XP_032774062 AP-5 complex subunit mu-1 protein-coding 626073858 Iqcb1 IQ motif containing B1 ENCODES a protein that exhibits BBSome binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN cilium assembly (ortholog); cytosolic ciliogenesis (ortholog); maintenance of animal organ identity (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); cone-rod dystrophy 2 (ortholog); fundus dystrophy (ortholog); FOUND IN centrosome (ortholog); photoreceptor connecting cilium (ortholog); photoreceptor outer segment (ortholog) 4 21694613 21741633 + 30032202 116898828 MODEL JAAIVD010000003;XM_032900180;XM_032900181;XM_032900182 XP_032756071;XP_032756072;XP_032756073 IQ calmodulin-binding motif-containing protein 1 protein-coding 626073884 Slc12a8 solute carrier family 12 member 8 4 18327819 18453980 + 22301074;30032202 116898794 MODEL JAAIVD010000003;XM_032900144;XM_032900145 XP_032756035;XP_032756036 protein-coding 626073901 LOC116906730 40S ribosomal protein S13-like 8 45005586 45006203 - 116906730 MODEL JAAIVD010000027 pseudo 626073902 LOC116909249 bcl-2-like protein 12 9 11272278 11276804 - 116909249 MODEL JAAIVD010000002 pseudo 626073903 LOC116893936 40S ribosomal protein S14-like 2 87363528 87364040 + 116893936 MODEL JAAIVD010000001 pseudo 626073904 Lingo2 leucine rich repeat and Ig domain containing 2 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Liver Neoplasms (ortholog); megacolon (ortholog); FOUND IN glutamatergic synapse (ortholog); synaptic membrane (ortholog) 22301074;30032202 116889787 MODEL JAAIVD010000370;XM_032890637 XP_032746528 leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2 protein-coding 626073905 LOC116903223 sentrin-specific protease 2-like 6 19693140 19694554 + 30032202 116903223 MODEL JAAIVD010000024;XM_032905598 XP_032761489 protein-coding 626073908 Polr1h RNA polymerase I subunit H PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH Experimental Neoplasms (ortholog); Stomach Neoplasms (ortholog); FOUND IN RNA polymerase I complex (ortholog) 18 9932459 9936474 - 22301074;30032202 116887716 MODEL JAAIVD010000013;XM_032889314 XP_032745205 Znrd1 DNA-directed RNA polymerase I subunit RPA12;zinc ribbon domain containing 1 protein-coding 626073917 LOC116899154 uncharacterized LOC116899154 4 87119908 87122721 + 116899154 MODEL JAAIVD010000003;XR_004387691 ncrna 626073921 Kcng3 potassium voltage-gated channel modifier subfamily G member 3 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 7 9312293 9360679 + 22301074;30032202 116905789 MODEL JAAIVD010000026;XM_032908766;XM_032908767 XP_032764657;XP_032764658 potassium voltage-gated channel subfamily G member 3 protein-coding 626073929 LOC116885034 small nucleolar RNA SNORA48 15 36898927 36899071 + 116885034 MODEL JAAIVD010000010;XR_004385921 snorna 626073932 LOC116895662 tyrosine-protein phosphatase non-receptor type substrate 1-like 3 189075516 189175463 + 30032202 116895662 MODEL JAAIVD010000012;XM_032896868 XP_032752759 protein-coding 626073941 Epb42 erythrocyte membrane protein band 4.2 INVOLVED IN cell morphogenesis (ortholog); hemoglobin metabolic process (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spherocytosis (ortholog); hereditary spherocytosis type 1 (ortholog); FOUND IN ankyrin-1 complex (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) 5 99157562 99175841 - 22301074;30032202 116900599 MODEL JAAIVD010000023;XM_032902315 XP_032758206 protein-coding 626073958 Pecr peroxisomal trans-2-enoyl-CoA reductase ENCODES a protein that exhibits 2,4-dienoyl-CoA reductase (NADPH) activity (ortholog); signaling receptor binding (ortholog); trans-2-enoyl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN phytol metabolic process (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) 4 145836735 145871157 - 30032202 116899480 MODEL JAAIVD010000003;XM_032901314 XP_032757205 protein-coding 626073970 Rnf4 ring finger protein 4 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH Angelman syndrome (ortholog); Testicular Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule end (ortholog); nuclear body (ortholog) 11 70721350 70742397 - 22301074;30032202 116912200 MODEL JAAIVD010000006;XM_032916134;XM_032916135;XM_032916136;XM_032916137;XM_032916138 XP_032772025;XP_032772026;XP_032772027;XP_032772028;XP_032772029 E3 ubiquitin-protein ligase RNF4 protein-coding 626073995 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 10379924 10379997 + 116906524 MODEL JAAIVD010000026 trna 626073996 LOC116912943 U7 small nuclear RNA 11 76714516 76714578 - 116912943 MODEL JAAIVD010000006;XR_004389511 snrna 626073999 Bank1 B cell scaffold protein with ankyrin repeats 1 ENCODES a protein that exhibits phospholipase binding (ortholog); protease binding (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell activation (ortholog); negative regulation of interleukin-6 production (ortholog); ASSOCIATED WITH autoimmune thyroiditis (ortholog); diffuse scleroderma (ortholog); Hashimoto Disease (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 3 22752744 23037352 + 22301074;30032202 116895308 MODEL JAAIVD010000012;XM_032896619;XM_032896620 XP_032752510;XP_032752511 B-cell scaffold protein with ankyrin repeats protein-coding 626074023 Dpyd dihydropyrimidine dehydrogenase ENCODES a protein that exhibits dihydropyrimidine dehydrogenase (NAD+) activity (ortholog); dihydropyrimidine dehydrogenase (NADP+) activity (ortholog); FAD binding (ortholog); INVOLVED IN circadian rhythm (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; beta-ureidopropionase deficiency pathway; carnosinemia pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 3 40352039 41165134 - 22301074;30032202 116895757 MODEL JAAIVD010000012;XM_032896921 XP_032752812 dihydropyrimidine dehydrogenase [NADP(+)] protein-coding 626074049 Efhb EF-hand domain family member B ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); regulation of calcineurin-NFAT signaling cascade (ortholog); regulation of store-operated calcium entry (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 4 90418115 90481788 - 22301074 116898077 MODEL JAAIVD010000003;XM_032899468 XP_032755359 EF-hand domain-containing family member B protein-coding 626074066 KEG97_t21 tRNA-Thr MT 15271 15337 + 64988256 trna 626074067 LOC116883796 uncharacterized LOC116883796 14 416827 426430 - 116883796 MODEL JAAIVD010000009;XR_004385788;XR_004385789;XR_004385790 ncrna 626074078 Dock7 dedicator of cytokinesis 7 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN axonogenesis (ortholog); establishment of neuroblast polarity (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 23 (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN COP9 signalosome (ortholog); neuromuscular junction (ortholog) 1 55405171 55575642 + 30032202 116899950 MODEL JAAIVD010000025;XM_032901790;XM_032901792;XM_032901794 XP_032757681;XP_032757683;XP_032757685 dedicator of cytokinesis protein 7 protein-coding 626074139 LOC116906568 proline-rich protein 23A3-like 8 90218282 90219070 + 116906568 MODEL JAAIVD010000027;XM_032909289 XP_032765180 protein-coding 626074142 LOC116899764 U6 spliceosomal RNA 4 159380297 159380400 + 116899764 MODEL JAAIVD010000003;XR_004387778 snrna 626074145 LOC116895642 60S ribosomal protein L15-like 3 177354629 177355236 - 116895642 MODEL JAAIVD010000012 pseudo 626074146 LOC116911951 alpha-S2-casein-like A 11 1164784 1178415 - 30032202 116911951 MODEL JAAIVD010000006;XM_032915872 XP_032771763 protein-coding 626074163 LOC116885698 zinc finger and SCAN domain containing protein 4C-like 1 214823078 214827566 + 30032202 116885698 MODEL JAAIVD010000025;XM_032887037 XP_032742928 protein-coding 626074168 Paip2 poly(A) binding protein interacting protein 2 ENCODES a protein that exhibits mRNA binding (ortholog); translation repressor activity (ortholog); INVOLVED IN memory (ortholog); negative regulation of translation (ortholog); negative regulation of translational initiation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 15 8752155 8770518 - 30032202 116884319 MODEL JAAIVD010000010;XM_032885450;XM_032885451;XM_032885452;XM_032885453 XP_032741341;XP_032741342;XP_032741343;XP_032741344 polyadenylate-binding protein-interacting protein 2 protein-coding 626074186 LOC116900556 olfactory receptor 4K3-like 5 89947949 89948893 + 22301074 116900556 MODEL JAAIVD010000023;XM_032902282 XP_032758173 protein-coding 626074189 LOC116911879 U6 spliceosomal RNA 10 58959786 58959892 - 116911879 MODEL JAAIVD010000005;XR_004389393 snrna 626074192 LOC116884353 high mobility group protein B1-like 15 37006381 37007034 + 116884353 MODEL JAAIVD010000010 pseudo 626074193 LOC116908972 40S ribosomal protein S27 9 63953613 63953967 - 22301074;30032202 116908972 MODEL JAAIVD010000002;XM_032912435 XP_032768326 protein-coding 626074198 LOC116894658 uncharacterized LOC116894658 2 209439968 209441139 + 116894658 MODEL JAAIVD010000001;XR_004387036 ncrna 626074202 LOC116900197 dynein heavy chain 17, axonemal-like 5 50169685 50171687 - 116900197 MODEL JAAIVD010000023;XM_032901956;XR_004387924 XP_032757847 protein-coding 626074210 Rdm1 RAD52 motif containing 1 FOUND IN cytosol (ortholog); nucleolus (ortholog) 9 60913758 60924029 + 22301074;30032202 116909990 MODEL JAAIVD010000002;XM_032913773 XP_032769664 RAD52 motif-containing protein 1 protein-coding 626074221 Efna5 ephrin A5 ENCODES a protein that exhibits chemorepellent activity (ortholog); ephrin receptor binding (ortholog); neurotrophin TRKB receptor binding (ortholog); INVOLVED IN apoptotic process (ortholog); axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH anencephaly (ortholog); COVID-19 (ortholog); Reperfusion Injury (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); cell periphery (ortholog) 4 172770266 173046994 - 22301074;30032202 116899688 MODEL JAAIVD010000003;XM_032901711 XP_032757602 ephrin-A5 protein-coding 626074231 LOC116893886 cytochrome c oxidase subunit 6A2, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 18 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex IV (ortholog) 2 73726972 73727716 + 22301074;30032202 116893886 MODEL JAAIVD010000001;XM_032895605 XP_032751496 protein-coding 626074238 LOC116908096 olfactory receptor 7E24-like 8 16330279 16331217 + 22301074;30032202 116908096 MODEL JAAIVD010000027;XM_032911376 XP_032767267 protein-coding 626074241 LOC116915158 U4 spliceosomal RNA 13 30640090 30640228 - 116915158 MODEL JAAIVD010000008;XR_004389822 snrna 626074244 LOC116906775 vomeronasal type-2 receptor 116-like 8 34210779 34248036 - 22301074;30032202 116906775 MODEL JAAIVD010000027;XM_032909622 XP_032765513 protein-coding 626074252 LOC116893697 olfactory receptor 477-like 2 13050495 13051427 + 22301074;30032202 116893697 MODEL JAAIVD010000001;XM_032895414 XP_032751305 protein-coding 626074255 Znf592 zinc finger protein 592 ENCODES a protein that exhibits insulin receptor substrate binding (ortholog); PH domain binding (ortholog); INVOLVED IN negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Galloway-Mowat syndrome (ortholog); Galloway-Mowat syndrome 1 (ortholog) 2 119202350 119250932 - 116891907 MODEL JAAIVD010000001;XM_032893328;XM_032893329 XP_032749219;XP_032749220 protein-coding 626074273 LOC116902236 uncharacterized LOC116902236 5 137706929 137711433 - 116902236 MODEL JAAIVD010000023;XR_004388054 ncrna 626074279 Slc24a1 solute carrier family 24 member 1 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Cerebral Hemorrhage (ortholog); congenital stationary night blindness (ortholog); congenital stationary night blindness 1D (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 8 59223173 59255199 - 22301074;30032202 116907826 MODEL JAAIVD010000027;XM_032911007;XM_032911008;XM_032911009;XM_032911010;XM_032911011;XM_032911012 XP_032766898;XP_032766899;XP_032766900;XP_032766901;XP_032766902;XP_032766903 sodium/potassium/calcium exchanger 1 protein-coding 626074304 LOC116889061 heterogeneous nuclear ribonucleoprotein D0-like X 23526468 23527486 + 116889061 MODEL JAAIVD010000014 pseudo 626074305 LOC116888249 uncharacterized LOC116888249 1 3322387 3402542 - 30032202 116888249 MODEL JAAIVD010000025;XM_032889536 XP_032745427 uncharacterized protein LOC116888249 protein-coding 626074318 Camk2n1 calcium/calmodulin dependent protein kinase II inhibitor 1 ENCODES a protein that exhibits calcium-dependent protein kinase inhibitor activity (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN long-term memory (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); PARTICIPATES IN calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); COVID-19 (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); postsynaptic density (ortholog) 1 19761568 19765025 - 30032202 116893843 MODEL JAAIVD010000025;XM_032895565 XP_032751456 calcium/calmodulin-dependent protein kinase II inhibitor 1 protein-coding 626074324 Strip1 striatin interacting protein 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); negative regulation of hippo signaling (ortholog); regulation of cell morphogenesis (ortholog); FOUND IN cytosol (ortholog); FAR/SIN/STRIPAK complex (ortholog); nucleus (ortholog) 3 50628062 50647606 + 30032202 116896387 MODEL JAAIVD010000012;XM_032897513 XP_032753404 striatin-interacting protein 1 protein-coding 626074349 LOC116911723 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 10 14297305 14297617 - 22301074;30032202 116911723 MODEL JAAIVD010000005;XM_032915696 XP_032771587 protein-coding 626074353 Ofcc1 orofacial cleft 1 candidate 1 FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 14 58978077 59262106 - 30032202 116883235 MODEL JAAIVD010000009;XM_032884243 XP_032740134 orofacial cleft 1 candidate gene 1 protein protein-coding 626074374 Ankrd34a ankyrin repeat domain 34A ASSOCIATED WITH Breast Neoplasms (ortholog) 3 60706295 60710244 - 22301074 116896505 MODEL JAAIVD010000012;XM_032897681;XM_032897682;XM_032897683;XM_032897684 XP_032753572;XP_032753573;XP_032753574;XP_032753575 ankyrin repeat domain-containing protein 34A protein-coding 626074387 LOC116889298 protein PPP4R3C-like X 47880731 47883256 + 116889298 MODEL JAAIVD010000014 pseudo 626074388 LOC116910723 small nucleolar RNA SNORA17 9 87318953 87319029 + 116910723 MODEL JAAIVD010000002 pseudo 626074389 LOC116894744 L-lactate dehydrogenase A chain-like 2 114697850 114698815 + 116894744 MODEL JAAIVD010000001 pseudo 626074390 Dennd2c DENN domain containing 2C ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); FOUND IN nucleoplasm (ortholog) 3 54870460 54909361 - 116896450 MODEL JAAIVD010000012;XM_032897607 XP_032753498 DENN domain-containing protein 2C protein-coding 626074412 Atp5mg ATP synthase membrane subunit g ENCODES a protein that exhibits proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 8 39449069 39455811 - 22301074;30032202 116906979 MODEL JAAIVD010000027;XM_032909900 XP_032765791 ATP synthase subunit g, mitochondrial protein-coding 626074419 LOC116900402 olfactory receptor 4P4-like 5 70045715 70046650 - 22301074 116900402 MODEL JAAIVD010000023;XM_032902147 XP_032758038 protein-coding 626074422 Cdkn1b cyclin dependent kinase inhibitor 1B ENCODES a protein that exhibits cyclin binding (ortholog); cyclin-dependent protein kinase regulator activity (ortholog); cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); INVOLVED IN autophagic cell death (ortholog); cellular response to antibiotic (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN forkhead class A signaling pathway; G1/S transition pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); Brain Injuries (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 6 14517515 14522629 - 22301074;30032202 116903166 MODEL JAAIVD010000024;XM_032905534 XP_032761425 cyclin-dependent kinase inhibitor 1B protein-coding 626074429 LOC116896163 uncharacterized LOC116896163 1 28796508 28797309 - 116896163 MODEL JAAIVD010000025;XR_004387317 ncrna 626074433 LOC116909087 olfactory receptor 1500 9 92709589 92710527 - 22301074;30032202 116909087 MODEL JAAIVD010000002;XM_032912560 XP_032768451 protein-coding 626074436 LOC116898561 40S ribosomal protein S9-like 4 156417651 156419808 - 116898561 MODEL JAAIVD010000003 pseudo 626074437 E2f5 E2F transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Disease Progression (ortholog); hydrocephalus (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 3 157585114 157602008 - 22301074;30032202 116897083 MODEL JAAIVD010000012;XM_032898706;XM_032898708 XP_032754597;XP_032754599 transcription factor E2F5 protein-coding 626074454 LOC116909903 olfactory receptor 2AK2-like 9 39244569 39245489 + 22301074 116909903 MODEL JAAIVD010000002;XM_032913654 XP_032769545 protein-coding 626074457 Golt1a golgi transport 1A FOUND IN endoplasmic reticulum (ortholog); Golgi cis cisterna (ortholog); nuclear envelope (ortholog) 10 2510991 2530687 - 30032202 116911464 MODEL JAAIVD010000005;XM_032915440;XM_032915441;XM_032915442;XM_032915443 XP_032771331;XP_032771332;XP_032771333;XP_032771334 vesicle transport protein GOT1A protein-coding 626074477 LOC116889991 glyceraldehyde-3-phosphate dehydrogenase-like 1 175699176 175700168 + 116889991 MODEL JAAIVD010000025 pseudo 626074478 LOC116910286 coiled-coil-helix-coiled-coil-helix domain-containing protein 2-like 9 42363539 42363993 + 116910286 MODEL JAAIVD010000002 pseudo 626074479 Anp32b acidic nuclear phosphoprotein 32 family member B ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase binding (ortholog); INVOLVED IN inner ear development (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell differentiation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH Spinal Cord Injuries (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 99536059 99558254 + 30032202 116901890 MODEL JAAIVD010000025;XM_032904102 XP_032759993 acidic leucine-rich nuclear phosphoprotein 32 family member B protein-coding 626074490 LOC116915007 uncharacterized LOC116915007 13 33330276 33334957 - 116915007 MODEL JAAIVD010000008;XM_032919404 XP_032775295 uncharacterized protein LOC116915007 protein-coding 626074499 LOC116888108 protein phosphatase inhibitor 2-like X 99991807 99993636 - 22301074;30032202 116888108 MODEL JAAIVD010000014;XM_032889465 XP_032745356 protein-coding 626074504 LOC116913007 U1 spliceosomal RNA 11 13747429 13747583 + 116913007 MODEL JAAIVD010000006 pseudo 626074505 LOC116892353 60 kDa heat shock protein, mitochondrial-like 1 61686211 61688571 - 116892353 MODEL JAAIVD010000025 pseudo 626074506 LOC116897656 U1 spliceosomal RNA 3 60810083 60810246 + 116897656 MODEL JAAIVD010000012;XR_004387622 snrna 626074509 Mrpl48 mitochondrial ribosomal protein L48 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 2 98849251 98890631 - 30032202 116891743 MODEL JAAIVD010000001;XM_032893051;XM_032893052 XP_032748942;XP_032748943 39S ribosomal protein L48, mitochondrial protein-coding 626074524 LOC116906312 U6 spliceosomal RNA 7 9677635 9677741 + 116906312 MODEL JAAIVD010000026;XR_004388600 snrna 626074527 LOC116906866 death domain-containing membrane protein NRADD 8 101205166 101208391 - 30032202 116906866 MODEL JAAIVD010000027;XM_032909769;XM_032909770 XP_032765660;XP_032765661 protein-coding 626074538 LOC116889535 small nucleolar RNA SNORA35 X 98257746 98257874 - 116889535 MODEL JAAIVD010000014;XR_004386470 snorna 626074541 Tp53bp2 tumor protein p53 binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); NF-kappaB binding (ortholog); p53 binding (ortholog); INVOLVED IN central nervous system development (ortholog); embryo development ending in birth or egg hatching (ortholog); heart development (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH breast lobular carcinoma (ortholog); Breast Neoplasms (ortholog); chromosome 1q41-q42 deletion syndrome (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 60697578 60750663 + 30032202 116911754 MODEL JAAIVD010000005;XM_032915747;XM_032915748 XP_032771638;XP_032771639 apoptosis-stimulating of p53 protein 2 protein-coding 626074567 Thoc7 THO complex subunit 7 INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 83830909 83845618 - 22301074;30032202 116913539 MODEL JAAIVD010000007;XM_032917735;XM_032917736;XM_032917737;XM_032917738 XP_032773626;XP_032773627;XP_032773628;XP_032773629 THO complex 7;THO complex subunit 7 homolog protein-coding 626074590 LOC116914900 glutathione S-transferase P-like 13 33510521 33511151 + 116914900 MODEL JAAIVD010000008 pseudo 626074591 Rbm41 RNA binding motif protein 41 X 92082430 92126165 + 30032202 116888649 MODEL JAAIVD010000014;XM_032889939 XP_032745830 RNA-binding protein 41 protein-coding 626074602 Nlk nemo like kinase ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); cellular response to osmotic stress (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH myocardial infarction (ortholog); Spinal Cord Injuries (ortholog); Subarachnoid Hemorrhage (ortholog); FOUND IN nucleus (ortholog) 9 91745338 91871996 + 22301074;30032202 116909307 MODEL JAAIVD010000002;XM_032912846 XP_032768737 serine/threonine-protein kinase NLK protein-coding 626074617 LOC116894398 keratin-associated protein 20-2-like 2 157179011 157179402 + 116894398 MODEL JAAIVD010000001;XM_032896106 XP_032751997 protein-coding 626074622 LOC116914332 cytochrome P450 2D10-like 1 252112812 252117509 - 22301074;30032202 116914332 MODEL JAAIVD010000025;XM_032918558 XP_032774449 protein-coding 626074635 LOC116887728 small nucleolar RNA SNORA17 18 20314258 20314387 - 116887728 MODEL JAAIVD010000013;XR_004386242 snorna 626074638 LOC116891048 dynein light chain Tctex-type 3-like 2 24626681 24627238 - 116891048 MODEL JAAIVD010000001 pseudo 626074639 LOC116887381 olfactory receptor 1361-like 18 10181339 10182268 - 22301074;30032202 116887381 MODEL JAAIVD010000013;XM_032888977 XP_032744868 protein-coding 626074642 Gnl3 G protein nucleolar 3 ENCODES a protein that exhibits GTP binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN positive regulation of miRNA transcription (ortholog); positive regulation of protein localization to chromosome, telomeric region (ortholog); positive regulation of protein sumoylation (ortholog); FOUND IN chromosome (ortholog); midbody (ortholog); nuclear body (ortholog) 13 6712985 6719437 - 22301074;30032202 116914431 MODEL JAAIVD010000008;XM_032918728 XP_032774619 guanine nucleotide-binding protein-like 3 protein-coding 626074661 Garin5a golgi associated RAB2 interactor 5A INVOLVED IN cell morphogenesis (ortholog); defense response to virus (ortholog); flagellated sperm motility (ortholog); FOUND IN Golgi apparatus (ortholog); sperm head (ortholog) 2 155031650 155037403 - 30032202 116892204 MODEL JAAIVD010000001;XM_032893745;XM_032893746;XM_032893747;XM_032893748;XM_032893750;XM_032893751;XM_032893752;XM_032893753 XP_032749636;XP_032749637;XP_032749638;XP_032749639;XP_032749641;XP_032749642;XP_032749643;XP_032749644 Fam71e1 family with sequence similarity 71 member E1;protein FAM71E1 protein-coding 626074691 Smg9 SMG9 nonsense mediated mRNA decay factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN brain development (ortholog); eye development (ortholog); heart development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog) 2 170294172 170316013 - 30032202 116892490 MODEL JAAIVD010000001;XM_032894226 XP_032750117 protein SMG9 protein-coding 626074709 Cnnm2 cyclin and CBS domain divalent metal cation transport mediator 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); magnesium ion transport (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); HYPOMAGNESEMIA, SEIZURES, AND INTELLECTUAL DISABILITY 1 (ortholog); FOUND IN basolateral plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 2 46225973 46354621 + 30032202 116891257 MODEL JAAIVD010000001;XM_032892139;XM_032892140 XP_032748030;XP_032748031 metal transporter CNNM2 protein-coding 626074722 LOC116889795 maestro heat-like repeat family member 5 30032202 116889795 MODEL JAAIVD010000381;XM_032890644 XP_032746535 protein-coding 626074723 LOC116906090 TAR DNA-binding protein 43-like 7 70908573 70917490 - 116906090 MODEL JAAIVD010000026 pseudo 626074724 Sox2 SRY-box transcription factor 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); anatomical structure formation involved in morphogenesis (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Anophthalmia (ortholog); Ataxia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 119179925 119182383 - 22301074;30032202 116896941 MODEL JAAIVD010000012;XM_032898509 XP_032754400 transcription factor SOX-2 protein-coding 626074729 LOC116914946 ral guanine nucleotide dissociation stimulator-like 13 11590165 11592212 - 116914946 MODEL JAAIVD010000008 pseudo 626074730 Irf2bpl interferon regulatory factor 2 binding protein like ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN development of secondary female sexual characteristics (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); nervous system development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 7 100968720 100972384 - 30032202 116905310 MODEL JAAIVD010000026;XM_032908194 XP_032764085 probable E3 ubiquitin-protein ligase IRF2BPL protein-coding 626074735 LOC116889622 ribosome biogenesis regulatory protein homolog Y 1154466 1190371 - 116889622 MODEL JAAIVD010000015 pseudo 626074736 Rbfa ribosome binding factor A FOUND IN mitochondrion (ortholog) 15 52028941 52038878 + 22301074 116884709 MODEL JAAIVD010000010;XM_032885895 XP_032741786 putative ribosome-binding factor A, mitochondrial protein-coding 626074746 Scaf4 SR-related CTD associated factor 4 ENCODES a protein that exhibits RNA binding (ortholog); RNA polymerase II C-terminal domain phosphoserine binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); Fliedner-Zweier syndrome (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 54307911 54363869 + 22301074;30032202 116899011 MODEL JAAIVD010000003;XM_032900459 XP_032756350 SR-related and CTD-associated factor 4 protein-coding 626074770 LOC116895195 olfactory receptor 2AG2-like 3 321199 322143 + 22301074 116895195 MODEL JAAIVD010000012;XM_032896537 XP_032752428 protein-coding 626074773 LOC116906859 olfactory receptor 145-like 8 32291929 32293257 + 22301074;30032202 116906859 MODEL JAAIVD010000027;XM_032909759 XP_032765650 protein-coding 626074777 LOC116883809 uncharacterized LOC116883809 14 73173182 73174524 + 116883809 MODEL JAAIVD010000009;XR_004385792 ncrna 626074781 Ska2 spindle and kinetochore associated complex subunit 2 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); establishment of meiotic spindle orientation (ortholog); mitotic metaphase chromosome alignment (ortholog); FOUND IN kinetochore (ortholog); meiotic spindle (ortholog); outer kinetochore (ortholog) 9 83665223 83683431 - 30032202 116909696 MODEL JAAIVD010000002;XM_032913361 XP_032769252 spindle and kinetochore-associated protein 2 protein-coding 626074789 Rtkn2 rhotekin 2 INVOLVED IN hemopoiesis (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH interstitial lung disease 2 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 18 18787457 18860935 - 22301074;30032202 116887648 MODEL JAAIVD010000013;XM_032889236 XP_032745127 rhotekin-2 protein-coding 626074806 LOC116903909 TIP41-like protein 1 142117816 142118693 + 116903909 MODEL JAAIVD010000025 pseudo 626074807 LOC116888873 lysine-specific demethylase 6A-like X 2147551 2165130 - 30032202 116888873 MODEL JAAIVD010000014;XM_032890137;XM_032890138 XP_032746028;XP_032746029 protein-coding 626074822 LOC116887921 chromosome-associated kinesin KIF4-like X 58376191 58391993 + 22301074;30032202 116887921 MODEL JAAIVD010000014;XM_032889387 XP_032745278 protein-coding 626074832 LOC116892213 uncharacterized LOC116892213 2 155102080 155109874 + 116892213 MODEL JAAIVD010000001;XR_004386927;XR_004386928 ncrna 626074839 LOC116914985 tripartite motif-containing protein 75-like 13 24148378 24149732 + 116914985 MODEL JAAIVD010000008 pseudo 626074840 Kif6 kinesin family member 6 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); aortic dissection (ortholog); coronary artery disease (ortholog); FOUND IN male germ cell nucleus (ortholog) 4 80023186 80313403 - 22301074;30032202 116899061 MODEL JAAIVD010000003;XM_032900532 XP_032756423 kinesin-like protein KIF6 protein-coding 626074867 Plb1 phospholipase B1 ENCODES a protein that exhibits calcium-independent phospholipase A2 activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN diacylglycerol catabolic process (ortholog); phosphatidylcholine catabolic process (ortholog); phosphatidylethanolamine catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; ASSOCIATED WITH prostate cancer (ortholog); rheumatoid arthritis (ortholog); FOUND IN brush border membrane (ortholog) 7 21800126 21901051 - 30032202 116905549 MODEL JAAIVD010000026;XM_032908580 XP_032764471 phospholipase B1, membrane-associated protein-coding 626074925 Trub1 TruB pseudouridine synthase family member 1 ENCODES a protein that exhibits pre-miRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine(55) synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of pre-miRNA processing (ortholog); tRNA modification (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) 2 58659788 58697581 - 22301074;30032202 116891324 MODEL JAAIVD010000001;XM_032892247;XM_032892248 XP_032748138;XP_032748139 probable tRNA pseudouridine synthase 1 protein-coding 626074939 LOC116905800 dnaJ homolog subfamily C member 17-like 7 94555844 94556756 - 30032202 116905800 MODEL JAAIVD010000026;XM_032908774 XP_032764665 protein-coding 626074942 Pkd2l2 polycystin 2 like 2, transient receptor potential cation channel 15 9917607 9952740 - 22301074;30032202 116884773 MODEL JAAIVD010000010;XM_032885999;XM_032886000 XP_032741890;XP_032741891 polycystic kidney disease 2-like 2 protein protein-coding 626074965 LOC116887765 U6 spliceosomal RNA 18 6965517 6965612 + 116887765 MODEL JAAIVD010000013 pseudo 626074966 LOC116895768 cellular tumor antigen p53-like 3 46915334 46916585 + 116895768 MODEL JAAIVD010000012 pseudo 626074967 Sgtb small glutamine rich tetratricopeptide repeat co-chaperone beta ENCODES a protein that exhibits Hsp70 protein binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN protein heterooligomerization (ortholog); protein homooligomerization (ortholog) 3 193224031 193258601 - 22301074;30032202 116897233 MODEL JAAIVD010000012;XM_032898956;XM_032898957 XP_032754847;XP_032754848 small glutamine rich tetratricopeptide repeat containing beta;small glutamine-rich tetratricopeptide repeat-containing protein beta protein-coding 626074986 Cab39l calcium binding protein 39 like 12 64835805 64937143 - 30032202 116913085 MODEL JAAIVD010000007;XM_032917215;XM_032917216;XM_032917217;XM_032917218 XP_032773106;XP_032773107;XP_032773108;XP_032773109 calcium-binding protein 39-like protein-coding 626075006 LOC116884131 U1 spliceosomal RNA 14 58841406 58841561 - 116884131 MODEL JAAIVD010000009;XR_004385855 snrna 626075009 LOC116890377 U6 spliceosomal RNA 1 157612988 157613082 + 116890377 MODEL JAAIVD010000025 pseudo 626075010 Eri1 exoribonuclease 1 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); histone pre-mRNA stem-loop binding (ortholog); ribosome binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); maturation of 5.8S rRNA (ortholog); rRNA 3'-end processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amenorrhea (ortholog); Developmental Disabilities (ortholog); Hoxha-Aliu syndrome (ortholog); FOUND IN cytoplasm (ortholog); histone pre-mRNA 3'end processing complex (ortholog); nucleolus (ortholog) 13 51554156 51574279 + 22301074;30032202 116914608 MODEL JAAIVD010000008;XM_032918971;XM_032918972 XP_032774862;XP_032774863 3'-5' exoribonuclease 1 protein-coding 626075024 LOC116907380 uncharacterized LOC116907380 8 52336733 52340022 - 116907380 MODEL JAAIVD010000027;XR_004388820 ncrna 626075029 LOC116908224 40S ribosomal protein S15a-like 8 77612176 77622742 + 116908224 MODEL JAAIVD010000027 pseudo 626075030 Camk1d calcium/calmodulin dependent protein kinase ID ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of apoptotic process (ortholog); positive regulation of CREB transcription factor activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 11643288 12042927 - 22301074;30032202 116883294 MODEL JAAIVD010000009;XM_032884302;XM_032884303;XM_032884304 XP_032740193;XP_032740194;XP_032740195 calcium/calmodulin-dependent protein kinase type 1D protein-coding 626075052 LOC116910303 60S ribosomal protein L37a-like 9 48751980 48756147 - 116910303 MODEL JAAIVD010000002 pseudo 626075053 Fhip2b FHF complex subunit HOOK interacting protein 2B 12 53754289 53771402 + 116913490 MODEL JAAIVD010000007;XM_032917690;XM_032917691 XP_032773581;XP_032773582 Fam160b2 family with sequence similarity 160 member B2;protein FAM160B2 protein-coding 626075077 LOC116888588 olfactory receptor 13C8 1 96696007 96696966 - 22301074 116888588 MODEL JAAIVD010000025;XM_032889891 XP_032745782 protein-coding 626075080 Glmn glomulin, FKBP associated protein ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); signaling receptor binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); circulatory system development (ortholog); epigenetic regulation of gene expression (ortholog); ASSOCIATED WITH arteriovenous malformation (ortholog); Blue Rubber Bleb Nevus Syndrome (ortholog); familial glomangioma (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 11 17316768 17356717 - 30032202 116912394 MODEL JAAIVD010000006;XM_032916451;XM_032916452;XM_032916453;XM_032916455 XP_032772342;XP_032772343;XP_032772344;XP_032772346 glomulin protein-coding 626075114 LOC116885600 translationally-controlled tumor protein-like 1 207006526 207007038 + 116885600 MODEL JAAIVD010000025 pseudo 626075115 Tfap2a transcription factor AP-2 alpha ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior neuropore closure (ortholog); basement membrane organization (ortholog); bone morphogenesis (ortholog); ASSOCIATED WITH amblyopia (ortholog); branchiooculofacial syndrome (ortholog); branchiootorenal syndrome (ortholog); FOUND IN clathrin-coated pit (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 59703253 59721386 - 22301074;30032202 116883416 MODEL JAAIVD010000009;XM_032884544 XP_032740435 transcription factor AP-2-alpha protein-coding 626075126 Rfx1 regulatory factor X1 ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 16188880 16218856 - 22301074;30032202 116886697 MODEL JAAIVD010000011;XM_032888196;XM_032888197;XM_032888198;XM_032888199 XP_032744087;XP_032744088;XP_032744089;XP_032744090 MHC class II regulatory factor RFX1 protein-coding 626075163 Tufm Tu translation elongation factor, mitochondrial ENCODES a protein that exhibits translation elongation factor activity (ortholog); INVOLVED IN response to ethanol (ortholog); translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency (ortholog); combined oxidative phosphorylation deficiency 4 (ortholog); Esophageal Neoplasms (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); synapse (ortholog) 2 75431729 75435386 - 22301074;30032202 116891522 MODEL JAAIVD010000001;XM_032892660;XM_032892661 XP_032748551;XP_032748552 elongation factor Tu, mitochondrial protein-coding 626075179 LOC116905611 ATP synthase subunit g, mitochondrial-like 7 14123668 14125522 - 116905611 MODEL JAAIVD010000026 pseudo 626075180 Pgam5 PGAM family member 5, mitochondrial serine/threonine protein phosphatase ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN necroptotic process (ortholog); negative regulation of cold-induced thermogenesis (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; nuclear factor, erythroid 2 like 2 signaling pathway; FOUND IN mitochondrion (ortholog) 16 44087747 44094698 + 30032202 116885481 MODEL JAAIVD010000004;XM_032886770;XM_032886771 XP_032742661;XP_032742662 serine/threonine-protein phosphatase PGAM5, mitochondrial protein-coding 626075192 LOC116902768 solute carrier family 25 member 39-like 6 71536723 71537787 + 116902768 MODEL JAAIVD010000024 pseudo 626075193 LOC116913021 U2 spliceosomal RNA 11 64931467 64931643 + 116913021 MODEL JAAIVD010000006 pseudo 626075194 Fam72a family with sequence similarity 72 member A INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 10 4288739 4300811 - 30032202 116910993 MODEL JAAIVD010000005;XM_032914708;XM_032914709 XP_032770599;XP_032770600 protein FAM72A protein-coding 626075204 LOC116902497 U6 spliceosomal RNA 5 65365130 65365235 + 116902497 MODEL JAAIVD010000023;XR_004388111 snrna 626075207 Ywhae tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); calcium channel regulator activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cerebral cortex development (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin-like growth factor signaling pathway; mTOR signaling pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); left ventricular noncompaction (ortholog); Miller-Dieker lissencephaly syndrome (ortholog); FOUND IN axon (ortholog); central region of growth cone (ortholog); cytoplasm (ortholog) 9 94448302 94486619 + 30032202 116909871 MODEL JAAIVD010000002;XM_032913603 XP_032769494 14-3-3 protein epsilon protein-coding 626075217 Mtbp MDM2 binding protein INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of mitotic nuclear division (ortholog); protein localization to kinetochore (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); kinetochore (ortholog) 1 229959918 230026900 + 30032202 116911610 MODEL JAAIVD010000025;XM_032915586 XP_032771477 mdm2-binding protein protein-coding 626075243 LOC116894555 olfactory receptor 49-like 2 177896721 177897695 - 22301074;30032202 116894555 MODEL JAAIVD010000001;XM_032896264 XP_032752155 protein-coding 626075246 LOC116900904 fructose-bisphosphate aldolase A-like 5 77568111 77594054 + 116900904 MODEL JAAIVD010000023 pseudo 626075247 LOC116904665 U7 small nuclear RNA 6 79974737 79974801 + 116904665 MODEL JAAIVD010000024;XR_004388365 snrna 626075250 C6H2orf81 chromosome 6 C2orf81 homolog 6 63064144 63070356 - 116903618 MODEL JAAIVD010000024;XM_032906268;XM_032906269 XP_032762159;XP_032762160 uncharacterized protein C2orf81 homolog protein-coding 626075263 Srsf4 serine and arginine rich splicing factor 4 ENCODES a protein that exhibits sequence-specific mRNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); response to insulin (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); clear cell renal cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nuclear speck (ortholog) 1 26351813 26379643 - 30032202 116895714 MODEL JAAIVD010000025;XM_032896903 XP_032752794 serine/arginine-rich splicing factor 4 protein-coding 626075273 LOC116895989 lysine-rich nucleolar protein 1-like 3 165560921 165562599 + 116895989 MODEL JAAIVD010000012 pseudo 626075274 Psme1 proteasome activator subunit 1 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); esophagus squamous cell carcinoma (ortholog) 12 69427101 69429986 - 22301074;30032202 116913674 MODEL JAAIVD010000007;XM_032917962 XP_032773853 proteasome activator complex subunit 1 protein-coding 626075289 LOC116909160 olfactory receptor 1468-like 9 31670214 31671152 - 22301074;30032202 116909160 MODEL JAAIVD010000002;XM_032912647 XP_032768538 protein-coding 626075292 Cckar cholecystokinin A receptor ENCODES a protein that exhibits cholecystokinin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); axonogenesis (ortholog); cellular response to hormone stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); cholelithiasis (ortholog); Gallbladder Neoplasms (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); membrane (ortholog) 11 52445042 52453724 + 22301074;30032202 116912808 MODEL JAAIVD010000006;XM_032916972 XP_032772863 cholecystokinin receptor type A protein-coding 626075301 Pofut4 protein O-fucosyltransferase 4 ENCODES a protein that exhibits fucosyltransferase activity (ortholog); peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN N-glycan fucosylation (ortholog); positive regulation of protein secretion (ortholog); ASSOCIATED WITH stomach cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 90502772 90506397 + 22301074;30032202 116913294 MODEL JAAIVD010000007;XM_032917421 XP_032773312 Fut11 alpha-(1,3)-fucosyltransferase 11;fucosyltransferase 11 protein-coding 626075308 Oas2 2'-5'-oligoadenylate synthetase 2 ENCODES a protein that exhibits 2'-5'-oligoadenylate synthetase activity (ortholog); ATP binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); interleukin-27-mediated signaling pathway (ortholog); positive regulation of interferon-beta production (ortholog); ASSOCIATED WITH Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 16 33071658 33094622 + 30032202 116885469 MODEL JAAIVD010000004;XM_032886750 XP_032742641 2'-5'-oligoadenylate synthase 2 protein-coding 626075323 LOC116900758 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial ENCODES a protein that exhibits 1-alpha,25-dihydroxyvitamin D3 23-hydroxylase activity (ortholog); 1-alpha,25-dihydroxyvitamin D3 24-hydroxylase activity (ortholog); 25-hydroxycholecalciferol-23-hydroxylase activity (ortholog); INVOLVED IN cellular response to vitamin D (ortholog); osteoblast differentiation (ortholog); response to vitamin D (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); breast carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) 5 147402590 147417101 + 1991512;22301074;30032202 116900758 MODEL JAAIVD010000023;X59506;XM_032902467;Z28351 CAA42093;CAA82206;XP_032758358 CYP24 25-hydroxyvitamin D3 24-hydroxylase protein-coding 626075339 LOC116900380 olfactory receptor 5I1-like 5 69580094 69581047 + 22301074;30032202 116900380 MODEL JAAIVD010000023;XM_032902128 XP_032758019 protein-coding 626075343 LOC116914779 uncharacterized LOC116914779 13 33516235 33542106 + 116914779 MODEL JAAIVD010000008;XR_004389768 ncrna 626075348 Blmh bleomycin hydrolase ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptidase activity (ortholog); INVOLVED IN response to toxic substance (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH Alzheimer's disease 1 (ortholog); FOUND IN cytoplasm (ortholog) 9 95615888 95658816 + 22301074;30032202 116908724 MODEL JAAIVD010000002;XM_032912068 XP_032767959 protein-coding 626075364 LOC116910251 HCLS1-associated protein X-1-like 9 29714896 29715719 - 116910251 MODEL JAAIVD010000002 pseudo 626075365 Ackr3 atypical chemokine receptor 3 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); scavenger receptor activity (ortholog); INVOLVED IN chemokine-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); ASSOCIATED WITH carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); endosome (ortholog) 4 162212965 162224536 + 22301074 116899628 MODEL JAAIVD010000003;XM_032901601 XP_032757492 protein-coding 626075371 Tex15 testis expressed 15, meiosis and synapsis associated INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); fertilization (ortholog); homeostasis of number of cells within a tissue (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); spermatogenic failure 1 (ortholog); spermatogenic failure 25 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 13 53437183 53451590 - 30032202 116914712 MODEL JAAIVD010000008;XM_032919143 XP_032775034 testis-expressed protein 15 protein-coding 626075378 LOC116904265 actin, cytoplasmic 2-like 6 38899785 38900998 - 116904265 MODEL JAAIVD010000024 pseudo 626075379 Ssbp1 single stranded DNA binding protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA-templated DNA replication (ortholog); mitochondrion organization (ortholog); positive regulation of helicase activity (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 6 99327522 99337352 - 22301074;30032202 116903916 MODEL JAAIVD010000024;XM_032906680;XM_032906681;XM_032906682;XM_032906684;XM_032906685;XM_032906686;XM_032906687;XM_032906688 XP_032762571;XP_032762572;XP_032762573;XP_032762575;XP_032762576;XP_032762577;XP_032762578;XP_032762579 single-stranded DNA-binding protein, mitochondrial protein-coding 626075413 Armh2 armadillo like helical domain containing 2 14 43796357 43800918 + 116884035 MODEL JAAIVD010000009;XM_032885274 XP_032741165 armadillo-like helical domain-containing protein 2 protein-coding 626075418 Pgbd5 piggyBac transposable element derived 5 ENCODES a protein that exhibits transposase activity (ortholog); INVOLVED IN non-replicative DNA transposition (ortholog); ASSOCIATED WITH Neoplastic Cell Transformation (ortholog); rhabdoid cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 43891945 43954634 - 30032202 116886226 MODEL JAAIVD010000011;XM_032887618 XP_032743509 piggyBac transposable element-derived protein 5 protein-coding 626075429 Selenow selenoprotein W INVOLVED IN erythrocyte differentiation (ortholog); response to lipopolysaccharide (ortholog); response to selenium ion (ortholog); ASSOCIATED WITH epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog) 2 173165979 173170940 + 30032202 116892613 MODEL JAAIVD010000001;XM_032894417 XP_032750308 protein-coding 626075439 LOC116896400 membrane-bound O-acyltransferase domain-containing protein 2-like 3 51571614 51572957 + 116896400 MODEL JAAIVD010000012 pseudo 626075440 LOC116910372 elongin-B-like 9 81840540 81843630 - 22301074;30032202 116910372 MODEL JAAIVD010000002;XM_032914219 XP_032770110 protein-coding 626075444 LOC116914710 uncharacterized LOC116914710 13 53373898 53374639 - 116914710 MODEL JAAIVD010000008;XR_004389764 ncrna 626075448 Slc9c2 solute carrier family 9 member C2 (putative) 10 40471490 40535623 + 22301074;30032202 116910889 MODEL JAAIVD010000005;XM_032914660 XP_032770551 sodium/hydrogen exchanger 11 protein-coding 626075478 LOC116893896 cardiotrophin-1 2 74182054 74187302 - 22301074 116893896 MODEL JAAIVD010000001;XM_032895614;XM_032895615;XM_032895616;XM_032895617 XP_032751505;XP_032751506;XP_032751507;XP_032751508 protein-coding 626075495 LOC116886786 U6 spliceosomal RNA 17 30991444 30991547 + 116886786 MODEL JAAIVD010000011;XR_004386179 snrna 626075498 Sympk symplekin scaffold protein PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 2 171569573 171598226 - 30032202 116892555 MODEL JAAIVD010000001;XM_032894334 XP_032750225 symplekin protein-coding 626075529 Tsga10 testis specific 10 ENCODES a protein that exhibits structural molecule activity (ortholog); INVOLVED IN cell projection assembly (ortholog); ASSOCIATED WITH spermatogenic failure 26 (ortholog); FOUND IN cytoplasm (ortholog); motile cilium (ortholog); neuron projection (ortholog) 4 113958793 114062386 - 116899302 MODEL JAAIVD010000003;XM_032900959 XP_032756850 testis-specific gene 10 protein protein-coding 626075552 Nkx1-2 NK1 homeobox 2 2 69241073 69244052 + 22301074;30032202 116893879 MODEL JAAIVD010000001;XM_032895602 XP_032751493 NK1 transcription factor-related protein 2 protein-coding 626075557 Gab2 GRB2 associated binding protein 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cell migration (ortholog); integrin-mediated signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH chronic myeloid leukemia (ortholog); melanoma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 2 95460302 95631441 + 116891690 MODEL JAAIVD010000001;XM_032892957 XP_032748848 GRB2-associated-binding protein 2 protein-coding 626075571 LOC116915085 KICSTOR complex protein C12orf66 homolog 13 15676251 15677149 - 116915085 MODEL JAAIVD010000008 pseudo 626075572 Nfyb nuclear transcription factor Y subunit beta ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN altered p53 signaling pathway; FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 165683758 165699364 + 22301074;30032202 116907618 MODEL JAAIVD010000025;XM_032910677;XM_032910686 XP_032766568;XP_032766577 protein-coding 626075587 Loxl1 lysyl oxidase like 1 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor (ortholog); protein-lysine 6-oxidase activity (ortholog); INVOLVED IN aorta development (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Cardiomegaly (ortholog); Choroidal Neovascularization (ortholog); FOUND IN acrosomal vesicle (ortholog); basement membrane (ortholog); extracellular matrix (ortholog) 8 52158278 52179622 - 22301074;30032202 116908182 MODEL JAAIVD010000027;XM_032911471 XP_032767362 lysyl oxidase homolog 1 protein-coding 626075596 Samd1 sterile alpha motif domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN foam cell differentiation (ortholog); lipoprotein lipid oxidation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN extracellular space (ortholog); nucleus (ortholog) 17 16283847 16286573 - 22301074 116886479 MODEL JAAIVD010000011;XM_032887982 XP_032743873 atherin protein-coding 626075605 Rbp7 retinol binding protein 7 ENCODES a protein that exhibits retinoid binding (ortholog) 1 11319598 11324428 + 30032202 116886166 MODEL JAAIVD010000025;XM_032887541 XP_032743432 retinoid-binding protein 7 protein-coding 626075613 Sdsl serine dehydratase like ENCODES a protein that exhibits glutamate racemase activity (ortholog); identical protein binding (ortholog); L-serine ammonia-lyase activity (ortholog) 16 33365688 33376175 + 30032202 116885751 MODEL JAAIVD010000004;XM_032887065 XP_032742956 serine dehydratase-like protein-coding 626075625 Pef1 penta-EF-hand domain containing 1 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN COPII vesicle coating (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); neural crest cell development (ortholog); FOUND IN COPII vesicle coat (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 1 28020827 28027859 - 22301074;30032202 116895986 MODEL JAAIVD010000025;XM_032897019 XP_032752910 peflin protein-coding 626075633 LOC116911217 pyruvate kinase PKM-like 10 59420564 59422792 + 22301074;30032202 116911217 MODEL JAAIVD010000005;XM_032915109 XP_032771000 protein-coding 626075638 LOC116896520 tubulin alpha-1B chain-like 1 31310529 31311839 + 116896520 MODEL JAAIVD010000025 pseudo 626075639 LOC116903053 40S ribosomal protein S25-like 6 7062273 7062643 + 116903053 MODEL JAAIVD010000024 pseudo 626075640 LOC116887018 core histone macro-H2A.2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN brain development (ortholog); dosage compensation by inactivation of X chromosome (ortholog); establishment of protein localization to chromatin (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN Barr body (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 18 27559395 27609206 - 22301074;30032202 116887018 MODEL JAAIVD010000013;XM_032888505 XP_032744396 protein-coding 626075653 LOC116907202 uncharacterized LOC116907202 8 4405248 4413418 - 22301074 116907202 MODEL JAAIVD010000027;XM_032910160 XP_032766051 uncharacterized protein LOC116907202 protein-coding 626075658 Sbno2 strawberry notch homolog 2 INVOLVED IN bone mineralization (ortholog); bone trabecula morphogenesis (ortholog); cellular response to interleukin-11 (ortholog) 1 154771737 154818411 + 30032202 116905369 MODEL JAAIVD010000025;XM_032908308;XM_032908316;XM_032908324;XM_032908333;XM_032908341;XM_032908349;XM_032908356;XM_032908364 XP_032764199;XP_032764207;XP_032764215;XP_032764224;XP_032764232;XP_032764240;XP_032764247;XP_032764255 protein strawberry notch homolog 2 protein-coding 626075712 LOC116895534 glyceraldehyde-3-phosphate dehydrogenase-like 3 120380321 120381272 - 116895534 MODEL JAAIVD010000012 pseudo 626075713 Rpl5 ribosomal protein L5 ENCODES a protein that exhibits 5S rRNA binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN negative regulation of protein neddylation (ortholog); negative regulation of ubiquitin protein ligase activity (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 1 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 17702305 17709260 + 22301074;30032202 116912080 MODEL JAAIVD010000006;XM_032915958;XM_032915959 XP_032771849;XP_032771850 60S ribosomal protein L5 protein-coding 626075729 Impg2 interphotoreceptor matrix proteoglycan 2 ENCODES a protein that exhibits heparin binding (ortholog); hyaluronic acid binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); intracellular protein localization (ortholog); retina morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); Eye Abnormalities (ortholog); fundus dystrophy (ortholog); FOUND IN interphotoreceptor matrix (ortholog); receptor complex (ortholog) 4 40319401 40383182 + 30032202 116898903 MODEL JAAIVD010000003;XM_032900305 XP_032756196 protein-coding 626075752 LOC116907844 eukaryotic translation initiation factor 5-like 8 34710468 34711907 - 116907844 MODEL JAAIVD010000027 pseudo 626075753 Mfsd1 major facilitator superfamily domain containing 1 ENCODES a protein that exhibits dipeptide uniporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN dipeptide transmembrane transport from lysosomal lumen to cytosol (ortholog); protein localization to lysosome (ortholog); protein stabilization (ortholog); FOUND IN lysosomal membrane (ortholog); lysosome (ortholog) 3 87652328 87670058 - 22301074;30032202 116896802 MODEL JAAIVD010000012;XM_032898275 XP_032754166 major facilitator superfamily domain-containing protein 1 protein-coding 626075772 Zcwpw2 zinc finger CW-type and PWWP domain containing 2 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog) 8 109213685 109304085 - 22301074;30032202 116907886 MODEL JAAIVD010000027;XM_032911075 XP_032766966 zinc finger CW-type PWWP domain protein 2 protein-coding 626075785 LOC116895950 eukaryotic translation initiation factor 2 subunit 3-like 3 136649495 136651012 - 116895950 MODEL JAAIVD010000012 pseudo 626075786 LOC116897957 olfactory receptor 5AC1-like 4 43206472 43215259 - 22301074;30032202 116897957 MODEL JAAIVD010000003;XM_032899360;XM_032899361 XP_032755251;XP_032755252 protein-coding 626075792 Shc2 SHC adaptor protein 2 1 155234838 155256235 + 22301074;30032202;9507002 116905763 MODEL AB001452;JAAIVD010000025;XM_032908734 BAA28173;XP_032764625 Sck SHC-transforming protein 2 protein-coding 626075809 LOC116886675 liver carboxylesterase B-1 17 14823635 14861214 + 30032202 116886675 MODEL JAAIVD010000011;XM_032888167 XP_032744058 protein-coding 626075828 Clvs2 clavesin 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); INVOLVED IN lysosome organization (ortholog); FOUND IN clathrin-coated vesicle (ortholog); endosome (ortholog); trans-Golgi network (ortholog) 2 207792031 207887217 - 30032202 116892936 MODEL JAAIVD010000001;XM_032894872;XM_032894873;XM_032894874 XP_032750763;XP_032750764;XP_032750765 clavesin-2 protein-coding 626075844 Slamf8 SLAM family member 8 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN B-1 B cell lineage commitment (ortholog); cellular response to xenobiotic stimulus (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH inflammatory bowel disease (ortholog) 10 51698697 51708112 - 30032202 116910914 MODEL JAAIVD010000005;XM_032914672 XP_032770563 protein-coding 626075852 Znf142 zinc finger protein 142 ASSOCIATED WITH epilepsy (ortholog); genetic disease (ortholog); Neurodevelopmental Disorder with Impaired Speech and Hyperkinetic Movements (ortholog) 4 148006777 148028192 - 30032202 116899504 MODEL JAAIVD010000003;XM_032901349;XM_032901350;XM_032901351;XM_032901352;XM_032901353;XM_032901354;XM_032901355;XM_032901356 XP_032757240;XP_032757241;XP_032757242;XP_032757243;XP_032757244;XP_032757245;XP_032757246;XP_032757247 protein-coding 626075883 Madcam1 mucosal vascular addressin cell adhesion molecule 1 ENCODES a protein that exhibits integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell adhesion (ortholog); cell-matrix adhesion (ortholog); heterotypic cell-cell adhesion (ortholog); ASSOCIATED WITH colitis (ortholog); Crohn's disease (ortholog); food allergy (ortholog) 1 155204435 155208099 - 22301074;30032202 116905738 MODEL JAAIVD010000025;XM_032908707;XM_032908715 XP_032764598;XP_032764606 mucosal addressin cell adhesion molecule 1 protein-coding 626075894 Itgb1bp2 integrin subunit beta 1 binding protein 2 ENCODES a protein that exhibits calcium ion binding (ortholog); integrin binding (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN Z disc (ortholog) X 59093869 59098990 - 116888995 MODEL JAAIVD010000014;XM_032890211 XP_032746102 integrin beta-1-binding protein 2 protein-coding 626075909 LOC116899837 small nucleolar RNA SNORA48 4 46853940 46854086 - 116899837 MODEL JAAIVD010000003;XR_004387834 snorna 626075912 Tcea2 transcription elongation factor A2 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); nucleoplasm (ortholog) 5 158779071 158786946 + 22301074;30032202 116902453 MODEL JAAIVD010000023;XM_032905014;XM_032905015;XM_032905016;XM_032905017 XP_032760905;XP_032760906;XP_032760907;XP_032760908 transcription elongation factor A protein 2 protein-coding 626075936 Tada3 transcriptional adaptor 3 ENCODES a protein that exhibits nuclear receptor binding (ortholog); protein domain specific binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleoplasm (ortholog) 6 33162424 33173652 + 30032202 116903414 MODEL JAAIVD010000024;XM_032905932;XM_032905933;XM_032905934;XM_032905935;XM_032905936 XP_032761823;XP_032761824;XP_032761825;XP_032761826;XP_032761827 transcriptional adapter 3 protein-coding 626075960 Cck cholecystokinin ENCODES a protein that exhibits hormone activity (ortholog); neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); axonogenesis (ortholog); cholecystokinin signaling pathway (ortholog); ASSOCIATED WITH acute pancreatitis (ortholog); alcohol dependence (ortholog); Alcohol Withdrawal Delirium (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); axon initial segment (ortholog) 8 112648198 112655467 - 22301074;30032202 116907968 MODEL JAAIVD010000027;XM_032911195;XM_032911196;XM_032911197 XP_032767086;XP_032767087;XP_032767088 protein-coding 626075975 LOC116902852 olfactory receptor 2A1/2A42-like 6 97440616 97441557 - 22301074 116902852 MODEL JAAIVD010000024;XM_032905180 XP_032761071 protein-coding 626075978 Phactr1 phosphatase and actin regulator 1 ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); cell motility (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); ARTERIAL DISSECTION (ortholog); atherosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 14 61680165 62154948 + 30032202 116883674 MODEL JAAIVD010000009;XM_032884872;XM_032884873;XM_032884874;XM_032884876;XM_032884877;XM_032884878;XM_032884879;XM_032884880;XM_032884881;XM_032884882 XP_032740763;XP_032740764;XP_032740765;XP_032740767;XP_032740768;XP_032740769;XP_032740770;XP_032740771;XP_032740772;XP_032740773 protein-coding 626076026 LOC116888935 Y-box-binding protein 1-like X 1124931 1130887 + 116888935 MODEL JAAIVD010000014 pseudo 626076027 Mfn2 mitofusin 2 ENCODES a protein that exhibits GTP binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN aerobic respiration (ortholog); blastocyst formation (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN apoptotic cell death pathway; mitochondria fusion pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); microtubule cytoskeleton (ortholog); mitochondrial outer membrane (ortholog) 1 12870233 12900603 + 22301074;30032202 116892935 MODEL JAAIVD010000025;XM_032894875 XP_032750766 mitofusin-2 protein-coding 626076050 LOC116890159 cytochrome P450 2D26-like 1 252168383 252172364 - 22301074;30032202 116890159 MODEL JAAIVD010000025;XM_032890894 XP_032746785 protein-coding 626076062 Gmnn geminin DNA replication inhibitor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); DNA replication preinitiation complex assembly (ortholog); negative regulation of cell cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatocellular carcinoma (ortholog); Meier-Gorlin syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 43807581 43815629 - 30032202 116883844 MODEL JAAIVD010000009;XM_032885108;XM_032885109 XP_032740999;XP_032741000 geminin protein-coding 626076076 LOC116908250 cell adhesion molecule-related/down-regulated by oncogenes-like 8 90350678 90364974 - 30032202 116908250 MODEL JAAIVD010000027;XM_032911506 XP_032767397 protein-coding 626076087 LOC116888057 T-complex protein 11 X-linked protein 2-like X 87990615 88002883 - 30032202 116888057 MODEL JAAIVD010000014;XM_032889446 XP_032745337 protein-coding 626076097 Scyl2 SCY1 like pseudokinase 2 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN brain development (ortholog); clathrin-dependent endocytosis (ortholog); endosome to lysosome transport (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita-4 (ortholog); genetic disease (ortholog) 1 168702612 168745198 - 22301074 116907895 MODEL JAAIVD010000025;XM_032911095;XM_032911103;XM_032911110;XM_032911118 XP_032766986;XP_032766994;XP_032767001;XP_032767009 SCY1-like protein 2 protein-coding 626076123 Slc9a4 solute carrier family 9 member A4 ENCODES a protein that exhibits sodium:proton antiporter activity (ortholog); INVOLVED IN gastric acid secretion (ortholog); glandular epithelial cell development (ortholog); transepithelial ammonium transport (ortholog); ASSOCIATED WITH Acidoses (ortholog); aortic dissection (ortholog); FOUND IN basolateral plasma membrane (ortholog) 4 116797912 116851317 + 22301074;30032202 116899327 MODEL JAAIVD010000003;XM_032901018 XP_032756909 sodium/hydrogen exchanger 4 protein-coding 626076139 LOC116897392 U6 spliceosomal RNA 3 163707494 163707600 + 116897392 MODEL JAAIVD010000012;XR_004387436 snrna 626076142 Tmsb4x thymosin beta 4 X-linked ENCODES a protein that exhibits actin monomer binding (ortholog); actin monomer sequestering activity (ortholog); enzyme binding (ortholog); INVOLVED IN muscle cell migration (ortholog); negative regulation of actin filament polymerization (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Joubert syndrome 1 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) X 30976885 30993037 + 22301074;30032202 116888709 MODEL JAAIVD010000014;XM_032889998 XP_032745889 thymosin beta-4 protein-coding 626076150 Avpi1 arginine vasopressin induced 1 INVOLVED IN positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog) 2 41234953 41240994 - 116891175 MODEL JAAIVD010000001;XM_032891989 XP_032747880 arginine vasopressin-induced protein 1 protein-coding 626076157 Dcun1d2 defective in cullin neddylation 1 domain containing 2 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); regulation of protein neddylation (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 13 70419532 70442932 + 30032202 116914245 MODEL JAAIVD010000008;XM_032918457 XP_032774348 DCN1-like protein 2 protein-coding 626076168 Klf16 KLF transcription factor 16 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN G protein-coupled dopamine receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog) 1 154309708 154319869 + 30032202 116905034 MODEL JAAIVD010000025;XM_032907716 XP_032763607 Krueppel-like factor 16;Kruppel like factor 16 protein-coding 626076174 LOC116885035 small nucleolar RNA SNORA48 15 77215658 77215802 - 116885035 MODEL JAAIVD010000010;XR_004385922 snorna 626076177 LOC116911815 small nucleolar RNA SNORA48 10 71192193 71192328 + 116911815 MODEL JAAIVD010000005 pseudo 626076178 Exosc1 exosome component 1 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH pontocerebellar hypoplasia type 1F (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) 2 41036812 41046847 - 22301074;30032202 116891167 MODEL JAAIVD010000001;XM_032891970 XP_032747861 exosome complex component CSL4 protein-coding 626076189 LOC116886765 5S ribosomal RNA 17 43136537 43136654 - 116886765 MODEL JAAIVD010000011;XR_004386166 rrna 626076192 Gins1 GINS complex subunit 1 INVOLVED IN DNA replication (ortholog); inner cell mass cell proliferation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); immunodeficiency 55 (ortholog); FOUND IN CMG complex (ortholog); cytoplasm (ortholog); GINS complex (ortholog) 5 130609933 130631732 + 22301074;30032202 116900689 MODEL JAAIVD010000023;XM_032902391 XP_032758282 DNA replication complex GINS protein PSF1 protein-coding 626076203 Tmem225 transmembrane protein 225 ENCODES a protein that exhibits protein phosphatase 1 binding (ortholog); protein phosphatase inhibitor activity (ortholog); FOUND IN inner acrosomal membrane (ortholog); outer acrosomal membrane (ortholog) 8 34747242 34749700 + 30032202 116907353 MODEL JAAIVD010000027;XM_032910286 XP_032766177 protein-coding 626076209 LOC116902496 U6 spliceosomal RNA 5 149198405 149198512 + 116902496 MODEL JAAIVD010000023;XR_004388110 snrna 626076212 Kif5b kinesin family member 5B ENCODES a protein that exhibits identical protein binding (ortholog); JUN kinase binding (ortholog); microtubule binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to type II interferon (ortholog); centrosome localization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mitochondria transport pathway; N-cadherin signaling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); diabetes mellitus (ortholog); epilepsy (ortholog); FOUND IN axonal growth cone (ortholog); centriolar satellite (ortholog); ciliary rootlet (ortholog) 14 32557058 32594376 - 22301074;30032202 116884017 MODEL JAAIVD010000009;XM_032885255 XP_032741146 kinesin-1 heavy chain protein-coding 626076242 LOC116900855 olfactory receptor 5AL1-like 5 63369486 63370445 - 22301074;30032202 116900855 MODEL JAAIVD010000023;XM_032902544 XP_032758435 protein-coding 626076245 LOC116892241 inositol-trisphosphate 3-kinase C-like 2 157122535 157124827 - 116892241 MODEL JAAIVD010000001 pseudo 626076246 Cxxc4 CXXC finger protein 4 ENCODES a protein that exhibits methyl-CpG binding (ortholog); PDZ domain binding (ortholog); zinc ion binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); Wnt signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); nucleus (ortholog) 3 24377706 24399240 + 22301074;30032202 116896228 MODEL JAAIVD010000012;XM_032897284;XM_032897286;XM_032897287;XM_032897288 XP_032753175;XP_032753177;XP_032753178;XP_032753179 CXXC-type zinc finger protein 4 protein-coding 626076260 Bcat2 branched chain amino acid transaminase 2 ENCODES a protein that exhibits branched-chain-amino-acid transaminase activity (ortholog); L-isoleucine-2-oxoglutarate transaminase activity (ortholog); L-leucine-2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); branched-chain amino acid metabolic process (ortholog); brown fat cell differentiation (ortholog); PARTICIPATES IN valine, leucine and isoleucine biosynthetic pathway; valine, leucine and isoleucine degradation pathway; ASSOCIATED WITH hypervalinemia and hyperleucine-isoleucinemia (ortholog); maple syrup urine disease (ortholog); pre-malignant neoplasm (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 2 153928614 153945948 - 22301074;30032202 116892141 MODEL JAAIVD010000001;XM_032893631 XP_032749522 branched-chain-amino-acid aminotransferase, mitochondrial protein-coding 626076275 LOC116895779 glutathione S-transferase Mu 2-like 3 50350718 50356284 + 22301074;30032202 116895779 MODEL JAAIVD010000012;XM_032896928 XP_032752819 protein-coding 626076285 Hspb7 heat shock protein family B (small) member 7 ENCODES a protein that exhibits filamin binding (ortholog); ASSOCIATED WITH Moebius syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); aggresome (ortholog); cytoplasm (ortholog) 1 16723190 16725396 - 22301074;30032202 116886390 MODEL JAAIVD010000025;XM_032887860;XM_032887868;XM_032887876;XM_032887884;XM_032887892;XM_032887901;XM_032887909 XP_032743751;XP_032743759;XP_032743767;XP_032743775;XP_032743783;XP_032743792;XP_032743800 heat shock protein beta-7 protein-coding 626076302 LOC116897255 40S ribosomal protein S27-like 3 197811223 197811556 + 22301074;30032202 116897255 MODEL JAAIVD010000012;XM_032898988 XP_032754879 protein-coding 626076307 Fam229b family with sequence similarity 229 member B 18 38930871 38941732 - 116887059 MODEL JAAIVD010000013;XM_032888550;XM_032888551;XM_032888553;XM_032888554 XP_032744441;XP_032744442;XP_032744444;XP_032744445 protein FAM229B protein-coding 626076322 Ftsj1 FtsJ RNA 2'-O-methyltransferase 1 ENCODES a protein that exhibits S-adenosyl-L-methionine binding (ortholog); tRNA (guanine) methyltransferase activity (ortholog); tRNA (guanosine(34)-2'-O)-methyltransferase activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); neurogenesis (ortholog); tRNA methylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) X 15651557 15659192 - 22301074;30032202 116888790 MODEL JAAIVD010000014;XM_032890070 XP_032745961 putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase protein-coding 626076339 LOC116891187 cytochrome P450 2A3 2 42495130 42503158 - 22301074;30032202 116891187 MODEL JAAIVD010000001;XM_032892005;XM_032892007 XP_032747896;XP_032747898 protein-coding 626076355 Tnfrsf11a TNF receptor superfamily member 11a ENCODES a protein that exhibits cytokine binding (ortholog); transmembrane signaling receptor activity (ortholog); tumor necrosis factor receptor activity (ortholog); INVOLVED IN adaptive immune response (ortholog); cellular response to zinc ion starvation (ortholog); circadian temperature homeostasis (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); autosomal recessive osteopetrosis 7 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); external side of plasma membrane (ortholog) 10 89894185 89941570 - 30032202 116910976 MODEL JAAIVD010000005;XM_032914691 XP_032770582 tumor necrosis factor receptor superfamily member 11A protein-coding 626076370 LOC116914017 60S ribosomal protein L9-like 12 62737397 62738901 - 116914017 MODEL JAAIVD010000007 pseudo 626076371 Cish cytokine inducible SH2 containing protein INVOLVED IN cytokine-mediated signaling pathway (ortholog); negative regulation of cytokine-mediated signaling pathway (ortholog); PARTICIPATES IN granulocyte-macrophage colony-stimulating factor signaling pathway; interleukin-2 signaling pathway; interleukin-3 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); Bacteremia (ortholog); malaria (ortholog); FOUND IN plasma membrane (ortholog) 8 98615594 98620872 + 22301074;30032202 116907610 MODEL JAAIVD010000027;XM_032910665 XP_032766556 cytokine-inducible SH2-containing protein protein-coding 626076378 Myot myotilin ENCODES a protein that exhibits alpha-actinin binding (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); limb-girdle muscular dystrophy (ortholog); FOUND IN Z disc (ortholog) 15 24143590 24162112 + 30032202 116884653 MODEL JAAIVD010000010;XM_032885810 XP_032741701 protein-coding 626076392 LOC116908277 RISC-loading complex subunit TARBP2-like 8 115092438 115093472 + 116908277 MODEL JAAIVD010000027 pseudo 626076393 LOC116908872 cytochrome c oxidase assembly factor 3 homolog, mitochondrial INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); mitochondrial complex IV deficiency nuclear type 14 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 60581956 60582955 - 30032202 116908872 MODEL JAAIVD010000002;XM_032912316 XP_032768207 protein-coding 626076399 Eya4 EYA transcriptional coactivator and phosphatase 4 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN inner ear development (ortholog); middle ear morphogenesis (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 10 (ortholog); Colorectal Neoplasms (ortholog); congestive heart failure (ortholog) 2 209196464 209314180 - 22301074;30032202 116892940 MODEL JAAIVD010000001;XM_032894884;XM_032894885;XM_032894886;XM_032894887;XM_032894888;XM_032894890;XM_032894891 XP_032750775;XP_032750776;XP_032750777;XP_032750778;XP_032750779;XP_032750781;XP_032750782 eyes absent homolog 4 protein-coding 626076430 LOC116913663 uncharacterized LOC116913663 12 44757962 44764097 + 116913663 MODEL JAAIVD010000007;XR_004389634 ncrna 626076434 LOC116912448 estradiol 17-beta-dehydrogenase 11 11 14061758 14093775 - 30032202 116912448 MODEL JAAIVD010000006;XM_032916517 XP_032772408 protein-coding 626076445 Mipep mitochondrial intermediate peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH cardiomyopathy (ortholog); combined oxidative phosphorylation deficiency 31 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 12 63544212 63647748 - 22301074;30032202 116913567 MODEL JAAIVD010000007;XM_032917779 XP_032773670 protein-coding 626076468 LOC116889883 vomeronasal type-2 receptor 116-like 1 157966362 158003689 + 22301074;30032202 116889883 MODEL JAAIVD010000025;XM_032890707 XP_032746598 protein-coding 626076477 Adcy10 adenylate cyclase 10 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); ATPase binding (ortholog); bicarbonate binding (ortholog); INVOLVED IN cAMP biosynthetic process (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); glucose catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Cardiomegaly (ortholog); Hypercalciuria, Absorptive, 2 (ortholog); Optic Nerve Injuries (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); astrocyte end-foot (ortholog) 10 44622333 44686978 + 22301074;30032202 116911451 MODEL JAAIVD010000005;XM_032915418 XP_032771309 adenylate cyclase type 10 protein-coding 626076510 Slc35d3 solute carrier family 35 member D3 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); UDP-glucose transmembrane transporter activity (ortholog); INVOLVED IN energy homeostasis (ortholog); platelet dense granule organization (ortholog); positive regulation of autophagy (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); endoplasmic reticulum (ortholog) 2 216751593 216755115 + 30032202 116892978 MODEL JAAIVD010000001;XM_032894937 XP_032750828 protein-coding 626076516 LOC116910744 U1 spliceosomal RNA 9 30578268 30578427 - 116910744 MODEL JAAIVD010000002;XR_004389257 snrna 626076519 Pde6d phosphodiesterase 6D ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); small GTPase binding (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome 22 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog) 4 158677857 158721878 - 22301074;30032202 116899593 MODEL JAAIVD010000003;XM_032901535 XP_032757426 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta protein-coding 626076528 Gpat2 glycerol-3-phosphate acyltransferase 2, mitochondrial ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN glycerol-3-phosphate metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); piRNA processing (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 106212870 106221387 + 30032202 116901934 MODEL JAAIVD010000023;XM_032904157;XM_032904158;XM_032904159;XM_032904160 XP_032760048;XP_032760049;XP_032760050;XP_032760051 protein-coding 626076558 Adar adenosine deaminase RNA specific ENCODES a protein that exhibits double-stranded RNA adenosine deaminase activity (ortholog); INVOLVED IN adenosine to inosine editing (ortholog); base conversion or substitution editing (ortholog); cellular response to virus (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 6 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear speck (ortholog) 3 63906038 63945339 - 22301074;30032202 116896634 MODEL JAAIVD010000012;XM_032897946;XM_032897947;XM_032897948;XM_032897949;XM_032897950;XM_032897951 XP_032753837;XP_032753838;XP_032753839;XP_032753840;XP_032753841;XP_032753842 double-stranded RNA-specific adenosine deaminase protein-coding 626076596 LOC116902308 transmembrane protein 189 5 150346366 150365942 + 30032202 116902308 MODEL JAAIVD010000023;XM_032904752 XP_032760643 protein-coding 626076606 Ggps1 geranylgeranyl diphosphate synthase 1 ENCODES a protein that exhibits (2E,6E)-farnesyl diphosphate synthase activity (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN isoprenoid metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH MUSCULAR DYSTROPHY, CONGENITAL HEARING LOSS, AND OVARIAN INSUFFICIENCY SYNDROME (ortholog); neuromuscular disease (ortholog); sensorineural hearing loss (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 14 32787181 32801399 - 22301074;30032202 116883492 MODEL JAAIVD010000009;XM_032884650;XM_032884652;XM_032884653;XM_032884654 XP_032740541;XP_032740543;XP_032740544;XP_032740545 geranylgeranyl pyrophosphate synthase protein-coding 626076622 LOC116895193 homeobox protein Rhox5-like 3 102057 102947 + 116895193 MODEL JAAIVD010000012 pseudo 626076623 Tmem242 transmembrane protein 242 INVOLVED IN mitochondrial proton-transporting ATP synthase complex assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 193366105 193399801 + 116892861 MODEL JAAIVD010000001;XM_032894758 XP_032750649 protein-coding 626076631 LOC116884279 protocadherin beta-4-like 15 949656 954417 + 116884279 MODEL JAAIVD010000010 pseudo 626076632 Ppp1r3d protein phosphatase 1 regulatory subunit 3D ENCODES a protein that exhibits enzyme binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN regulation of glycogen biosynthetic process (ortholog); regulation of glycogen catabolic process (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; glycogen biosynthetic pathway; glycogen degradation pathway; FOUND IN glycogen granule (ortholog) 5 155479194 155482291 - 30032202 116902396 MODEL JAAIVD010000023;XM_032904916 XP_032760807 protein-coding 626076637 LOC116907549 alpha-enolase-like 8 99139403 99140691 + 116907549 MODEL JAAIVD010000027 pseudo 626076638 LOC116900075 60S ribosomal protein L10-like 5 16994448 16995435 + 116900075 MODEL JAAIVD010000023 pseudo 626076639 Cdr2l cerebellar degeneration related protein 2 like ENCODES a protein that exhibits identical protein binding (ortholog) 9 68705716 68717898 - 116909443 MODEL JAAIVD010000002;XM_032913022 XP_032768913 cerebellar degeneration-related protein 2-like protein-coding 626076648 LOC116894141 olfactory receptor 56A4-like 2 104069626 104070563 - 22301074 116894141 MODEL JAAIVD010000001;XM_032895859 XP_032751750 protein-coding 626076651 LOC116900420 olfactory receptor 4C46-like 5 70440683 70441611 + 116900420 MODEL JAAIVD010000023 pseudo 626076652 LOC116902695 DBH-like monooxygenase protein 2 6 41713008 41721472 - 22301074;30032202 116902695 MODEL JAAIVD010000024;XM_032905051 XP_032760942 protein-coding 626076667 Sel1l SEL1L adaptor subunit of SYVN1 ubiquitin ligase INVOLVED IN ERAD pathway (ortholog); protein secretion (ortholog); response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, POOR GROWTH, DYSMORPHIC FACIES, AND AGAMMAGLOBULINEMIA (ortholog); NEURODEVELOPMENTAL DISORDER WITH POOR GROWTH, ABSENT SPEECH, PROGRESSIVE ATAXIA, AND DYSMORPHIC FACIES (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); Hrd1p ubiquitin ligase complex (ortholog) 7 104936896 104980240 - 22301074;30032202 116905336 MODEL JAAIVD010000026;XM_032908232 XP_032764123 SEL1L adaptor subunit of ERAD E3 ubiquitin ligase;protein sel-1 homolog 1 protein-coding 626076692 Hopx HOP homeobox ENCODES a protein that exhibits histone deacetylase regulator activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); heart development (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog) 11 33837647 33864216 - 22301074;30032202 116912555 MODEL JAAIVD010000006;XM_032916655;XM_032916656;XM_032916657 XP_032772546;XP_032772547;XP_032772548 homeodomain-only protein protein-coding 626076706 LOC116899785 U6 spliceosomal RNA 4 21298181 21298283 + 116899785 MODEL JAAIVD010000003;XR_004387793 snrna 626076709 LOC116899855 small nucleolar RNA SNORA17 4 111336355 111336480 - 116899855 MODEL JAAIVD010000003;XR_004387851 snorna 626076712 Abca3 ATP binding cassette subfamily A member 3 ENCODES a protein that exhibits ABC-type xenobiotic transporter activity (ortholog); ATP hydrolysis activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lung development (ortholog); phosphatidylcholine metabolic process (ortholog); phosphatidylglycerol metabolic process (ortholog); PARTICIPATES IN altered surfactant homeostasis pathway; surfactant homeostasis pathway; transport pathway; ASSOCIATED WITH carbamoyl phosphate synthetase I deficiency disease (ortholog); chromosome 22q11.2 deletion syndrome, distal (ortholog); Colorectal Neoplasms (ortholog); FOUND IN alveolar lamellar body (ortholog); alveolar lamellar body membrane (ortholog); cytoplasmic vesicle membrane (ortholog) 9 1641001 1698253 + 22301074;30032202 116908529 MODEL JAAIVD010000002;XM_032911711 XP_032767602 ATP-binding cassette sub-family A member 3 protein-coding 626076748 Ipo9 importin 9 ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN proteasomal protein catabolic process (ortholog); proteasome localization (ortholog); protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 10 289501 340677 + 22301074;30032202 116911793 MODEL JAAIVD010000005;XM_032915794;XM_032915795;XM_032915796 XP_032771685;XP_032771686;XP_032771687 importin-9 protein-coding 626076783 LOC116897989 keratin-associated protein 11-1 4 54993879 54994743 + 30032202 116897989 MODEL JAAIVD010000003;XM_032899391;XM_032899392 XP_032755282;XP_032755283 protein-coding 626076790 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 97088731 97088802 + 116895128 MODEL JAAIVD010000001 trna 626076791 LOC116890990 macrophage-expressed gene 1 protein-like 2 12447052 12449214 + 30032202 116890990 MODEL JAAIVD010000001;XM_032891664 XP_032747555 protein-coding 626076796 Rc3h1 ring finger and CCCH-type domains 1 ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); double-stranded RNA binding (ortholog); miRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); B cell homeostasis (ortholog); lymph node development (ortholog); ASSOCIATED WITH Familial Hemophagocytic Lymphohistiocytosis 6 (ortholog); peripheral T-cell lymphoma (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); P-body (ortholog) 10 40216392 40258779 + 22301074 116911773 MODEL JAAIVD010000005;XM_032915766 XP_032771657 roquin-1 protein-coding 626076819 Gpaa1 glycosylphosphatidylinositol anchor attachment 1 ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); Glycosylphosphatidylinositol Biosynthesis Defect 15 (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 248663572 248667264 + 22301074;30032202 116913044 MODEL JAAIVD010000025;XM_032917186;XM_032917187 XP_032773077;XP_032773078 glycosylphosphatidylinositol anchor attachment 1 protein protein-coding 626076838 Layn layilin ENCODES a protein that exhibits hyaluronic acid binding (ortholog) 8 45484943 45510659 - 30032202 116907400 MODEL JAAIVD010000027;XM_032910354 XP_032766245 protein-coding 626076850 C5ar2 complement C5a receptor 2 INVOLVED IN negative regulation of interleukin-6 production (ortholog); negative regulation of neutrophil chemotaxis (ortholog); negative regulation of tumor necrosis factor production (ortholog); FOUND IN apical part of cell (ortholog); basal plasma membrane (ortholog) 2 172817113 172832206 + 22301074;30032202 116892604 MODEL JAAIVD010000001;XM_032894398;XM_032894400 XP_032750289;XP_032750291 C5a anaphylatoxin chemotactic receptor 2;complement component 5a receptor 2 protein-coding 626076859 LOC116910535 hepatitis A virus cellular receptor 1 homolog 9 29244327 29256767 + 30032202 116910535 MODEL JAAIVD010000002;XM_032914443 XP_032770334 protein-coding 626076868 LOC116889855 uncharacterized LOC116889855 1 153269760 153284403 - 116889855 MODEL JAAIVD010000025;XR_004386516 ncrna 626076872 LOC116908666 uncharacterized LOC116908666 9 57419638 57441768 - 116908666 MODEL JAAIVD010000002;XR_004389008;XR_004389009 ncrna 626076880 Gpihbp1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 ENCODES a protein that exhibits chylomicron binding (ortholog); high-density lipoprotein particle binding (ortholog); lipase binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular protein transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH familial GPIHBP1 deficiency (ortholog); familial lipoprotein lipase deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); catalytic complex (ortholog) 1 247921739 247923328 + 30032202 116890148 MODEL JAAIVD010000025;XM_032890882;XM_032890883 XP_032746773;XP_032746774 glycosylphosphatidylinositol-anchored high density lipoprotein-binding protein 1 protein-coding 626076892 Klhl12 kelch like family member 12 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN COPII vesicle coating (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); neural crest cell development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; FOUND IN centriolar satellite (ortholog); COPII vesicle coat (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog) 10 1216153 1249945 - 22301074 116911027 MODEL JAAIVD010000005;XM_032914763;XM_032914764;XM_032914765;XM_032914766;XM_032914767 XP_032770654;XP_032770655;XP_032770656;XP_032770657;XP_032770658 kelch-like protein 12 protein-coding 626076918 Got1l1 glutamic-oxaloacetic transaminase 1 like 1 13 59321265 59326287 + 22301074;30032202 116915049 MODEL JAAIVD010000008;XM_032919461 XP_032775352 putative aspartate aminotransferase, cytoplasmic 2 protein-coding 626076929 LOC116900676 cystatin-9-like 5 128386296 128416093 - 22301074;30032202 116900676 MODEL JAAIVD010000023;XM_032902381 XP_032758272 protein-coding 626076937 Cd276 CD276 molecule ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); negative regulation of interleukin-2 production (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); long QT syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog) 8 52398784 52425951 - 116906909 MODEL JAAIVD010000027;XM_032909827 XP_032765718 CD276 antigen protein-coding 626076949 LOC116909313 olfactory receptor 1361-like 9 38323750 38324689 - 116909313 MODEL JAAIVD010000002 pseudo 626076950 Fkbp15 FKBP prolyl isomerase family member 15 ASSOCIATED WITH amphetamine abuse (ortholog); genetic disease (ortholog); substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); axon (ortholog); endosome (ortholog) 1 91169867 91228402 + 22301074;30032202 116901433 MODEL JAAIVD010000025;XM_032903337;XM_032903345 XP_032759228;XP_032759236 FK506-binding protein 15;FKBP prolyl isomerase 15 protein-coding 626076986 LOC116910154 uncharacterized LOC116910154 9 42568835 42579753 - 116910154 MODEL JAAIVD010000002;XR_004389138 ncrna 626076991 LOC116911276 protein piccolo-like 10 94443417 94447058 - 30032202 116911276 MODEL JAAIVD010000005;XM_032915183 XP_032771074 protein-coding 626076998 LOC116902855 olfactory receptor 2A14-like 6 97513078 97514010 - 22301074 116902855 MODEL JAAIVD010000024;XM_032905183 XP_032761074 protein-coding 626077001 LOC116912965 small nucleolar RNA SNORA18 11 71172882 71173010 - 116912965 MODEL JAAIVD010000006;XR_004389532 snorna 626077004 Sema6b semaphorin 6B ENCODES a protein that exhibits semaphorin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system development (ortholog); hippocampus development (ortholog); ASSOCIATED WITH cerebellar hypoplasia (ortholog); COVID-19 (ortholog); fundus dystrophy (ortholog) 4 87511871 87528714 - 30032202 116899170 MODEL JAAIVD010000003;XM_032900739 XP_032756630 semaphorin-6B protein-coding 626077025 Aipl1 AIP like 1 HSP90 co-chaperone ENCODES a protein that exhibits farnesylated protein binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); phototransduction, visible light (ortholog); protein farnesylation (ortholog); ASSOCIATED WITH blindness (ortholog); cone-rod dystrophy 2 (ortholog); Eye Abnormalities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 9 43468434 43477134 + 22301074 116909495 MODEL JAAIVD010000002;XM_032913100 XP_032768991 aryl hydrocarbon receptor interacting protein like 1;aryl-hydrocarbon-interacting protein-like 1 protein-coding 626077035 LOC116907745 olfactory receptor 145-like 8 31618960 31619901 + 22301074;30032202 116907745 MODEL JAAIVD010000027;XM_032910881 XP_032766772 protein-coding 626077038 LOC116903981 uncharacterized protein C10orf143 homolog 6 105382343 105382737 - 116903981 MODEL JAAIVD010000024;XM_032906789 XP_032762680 protein-coding 626077043 Inpp4b inositol polyphosphate-4-phosphatase type II B ENCODES a protein that exhibits lipid binding (ortholog); phosphatidylinositol bisphosphate phosphatase activity (ortholog); phosphatidylinositol trisphosphate phosphatase activity (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); negative regulation of osteoclast differentiation (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN inositol phosphate metabolic pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); pancreatic cancer (ortholog) 17 18120336 18459917 - 30032202 116886406 MODEL JAAIVD010000011;XM_032887878;XM_032887879;XM_032887880 XP_032743769;XP_032743770;XP_032743771 inositol polyphosphate 4-phosphatase type II protein-coding 626077074 Mmp14 matrix metallopeptidase 14 ENCODES a protein that exhibits endopeptidase activity (ortholog); integrin binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); astrocyte cell migration (ortholog); bone development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); adenocarcinoma (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 12 70557769 70568324 - 22301074;30032202 116913551 MODEL JAAIVD010000007;XM_032917757 XP_032773648 matrix metalloproteinase-14 protein-coding 626077088 LOC116896478 uncharacterized LOC116896478 3 58636144 58641856 + 116896478 MODEL JAAIVD010000012;XR_004387339 ncrna 626077093 Oaz3 ornithine decarboxylase antizyme 3 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); ornithine decarboxylase inhibitor activity (ortholog); INVOLVED IN negative regulation of polyamine transmembrane transport (ortholog); negative regulation of stress fiber assembly (ortholog); positive regulation of intracellular protein transport (ortholog); PARTICIPATES IN polyamine metabolic pathway; FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 62736612 62739528 + 22301074;30032202 116896588 MODEL JAAIVD010000012;XM_032897828 XP_032753719 protein-coding 626077102 Srebf2 sterol regulatory element binding transcription factor 2 ENCODES a protein that exhibits C-8 sterol isomerase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cellular response to starvation (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN altered p53 signaling pathway; sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); atherosclerosis (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); endoplasmic reticulum (ortholog) 1 251877821 251935317 + 22301074;30032202 116914219 MODEL JAAIVD010000025;XM_032918417 XP_032774308 sterol regulatory element-binding protein 2 protein-coding 626077125 LOC116910240 uncharacterized LOC116910240 9 64137121 64138752 - 116910240 MODEL JAAIVD010000002;XR_004389145 ncrna 626077129 LOC116889562 small nucleolar RNA U3 X 76413530 76413739 - 116889562 MODEL JAAIVD010000014;XR_004386484 snorna 626077132 F2r coagulation factor II thrombin receptor ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); G-protein beta-subunit binding (ortholog); INVOLVED IN cell-cell junction maintenance (ortholog); connective tissue replacement involved in inflammatory response wound healing (ortholog); dendritic cell homeostasis (ortholog); PARTICIPATES IN G protein mediated signaling pathway; protease mediated signaling via protease-activated receptor 1; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Experimental Arthritis (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); early endosome (ortholog) 3 222575371 222592022 + 22301074;30032202 116897370 MODEL JAAIVD010000012;XM_032899127 XP_032755018 proteinase-activated receptor 1 protein-coding 626077138 S100a9 S100 calcium binding protein A9 INVOLVED IN actin cytoskeleton organization (ortholog); astrocyte development (ortholog); autocrine signaling (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); adult respiratory distress syndrome (ortholog); celiac disease (ortholog); FOUND IN calprotectin complex (ortholog); cornified envelope (ortholog); cytoplasm (ortholog) 3 62916810 62919541 + 22301074;30032202 116895417 MODEL JAAIVD010000012;XM_032896699 XP_032752590 protein S100-A9 protein-coding 626077145 Lrrc18 leucine rich repeat containing 18 13 8735989 8741996 + 22301074 116914764 MODEL JAAIVD010000008;XM_032919213 XP_032775104 leucine-rich repeat-containing protein 18 protein-coding 626077151 Mettl6 methyltransferase 6, tRNA N3-cytidine ENCODES a protein that exhibits enzyme binding (ortholog); tRNA (cytidine-3-)-methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog); tRNA modification (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 13 7199376 7214456 - 116914389 MODEL JAAIVD010000008;XM_032918606;XM_032918607;XM_032918608 XP_032774497;XP_032774498;XP_032774499 methyltransferase 6, methylcytidine;methyltransferase like 6;tRNA N(3)-methylcytidine methyltransferase METTL6 protein-coding 626077168 Foxc1 forkhead box C1 ENCODES a protein that exhibits DNA binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN artery morphogenesis (ortholog); blood vessel development (ortholog); blood vessel diameter maintenance (ortholog); ASSOCIATED WITH alopecia (ortholog); anterior segment dysgenesis (ortholog); anterior segment dysgenesis 3 (ortholog); FOUND IN cytosol (ortholog); heterochromatin (ortholog); nucleoplasm (ortholog) 14 50839175 50843146 + 30032202 116883857 MODEL JAAIVD010000009;XM_032885125 XP_032741016 forkhead box protein C1 protein-coding 626077173 LOC116888470 AP-1 complex-associated regulatory protein-like X 109831484 109832838 + 22301074;30032202 116888470 MODEL JAAIVD010000014;XM_032889751 XP_032745642 protein-coding 626077178 LOC116894751 thioredoxin-dependent peroxide reductase, mitochondrial-like 2 143281263 143282060 + 116894751 MODEL JAAIVD010000001 pseudo 626077179 Manea mannosidase endo-alpha ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); glycoprotein endo-alpha-1,2-mannosidase activity (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 116435819 116457905 - 30032202 116902440 MODEL JAAIVD010000025;XM_032904985;XM_032904995 XP_032760876;XP_032760886 glycoprotein endo-alpha-1,2-mannosidase protein-coding 626077193 LOC116910891 glyceraldehyde-3-phosphate dehydrogenase-like 10 40893336 40894303 + 116910891 MODEL JAAIVD010000005 pseudo 626077194 Foxm1 forkhead box M1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); G2/M transition of mitotic cell cycle (ortholog); liver development (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Neoplasms (ortholog); gestational diabetes (ortholog); FOUND IN nucleus (ortholog) 6 19325199 19337537 - 22301074;30032202 116903213 MODEL JAAIVD010000024;XM_032905587;XM_032905588 XP_032761478;XP_032761479 forkhead box protein M1 protein-coding 626077208 LOC116893962 olfactory receptor 2AT4-like 2 98011435 98012415 + 22301074 116893962 MODEL JAAIVD010000001;XM_032895679 XP_032751570 protein-coding 626077211 Gsdmc gasdermin C ENCODES a protein that exhibits wide pore channel activity (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); pyroptotic inflammatory response (ortholog); type 2 immune response (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 1 238106580 238117798 - 30032202 116912087 MODEL JAAIVD010000025;XM_032915975 XP_032771866 gasdermin-C protein-coding 626077225 Kcnj10 potassium inwardly rectifying channel subfamily J member 10 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cellular response to potassium ion (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); amyotrophic lateral sclerosis (ortholog); autistic disorder (ortholog); FOUND IN apical plasma membrane (ortholog); astrocyte projection (ortholog); basolateral plasma membrane (ortholog) 10 51453854 51485088 + 22301074;30032202 116911176 MODEL JAAIVD010000005;XM_032915039;XM_032915040 XP_032770930;XP_032770931 ATP-sensitive inward rectifier potassium channel 10 protein-coding 626077234 Snx6 sorting nexin 6 ENCODES a protein that exhibits dynactin binding (ortholog); protein homodimerization activity (ortholog); type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN cellular response to amyloid-beta (ortholog); cellular response to epidermal growth factor stimulus (ortholog); intracellular protein transport (ortholog); PARTICIPATES IN retromer-mediated pathway; FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); endosome (ortholog) 7 68113966 68156011 - 22301074;30032202 116905051 MODEL JAAIVD010000026;XM_032907737;XM_032907738;XM_032907741 XP_032763628;XP_032763629;XP_032763632 sorting nexin-6 protein-coding 626077260 LOC116893399 heterogeneous nuclear ribonucleoprotein K-like 2 171794224 171798555 - 116893399 MODEL JAAIVD010000001 pseudo 626077261 LOC116903079 aspartyl/asparaginyl beta-hydroxylase 1 133999295 134074154 + 22301074;30032202 116903079 MODEL JAAIVD010000025;XM_032905434 XP_032761325 protein-coding 626077276 LOC116906489 U1 spliceosomal RNA 7 10421615 10421777 - 116906489 MODEL JAAIVD010000026;XR_004388732 snrna 626077279 LOC116888805 zinc finger protein 84-like X 14021286 14033636 + 30032202 116888805 MODEL JAAIVD010000014;XM_032890084 XP_032745975 protein-coding 626077288 Serpinb2 serpin family B member 2 PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN cornified envelope (ortholog) 10 86180939 86189893 - 22301074;30032202 116911738 MODEL JAAIVD010000005;XM_032915718 XP_032771609 plasminogen activator inhibitor 2 protein-coding 626077299 Ccdc86 coiled-coil domain containing 86 INVOLVED IN chromosome segregation (ortholog); mitotic nuclear division (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 10422372 10428801 - 30032202 116890975 MODEL JAAIVD010000001;XM_032891642 XP_032747533 coiled-coil domain-containing protein 86 protein-coding 626077307 LOC116893163 glyceraldehyde-3-phosphate dehydrogenase-like 2 102438572 102439530 + 116893163 MODEL JAAIVD010000001 pseudo 626077308 LOC116902950 vomeronasal type-1 receptor 96-like 6 124112508 124113455 - 22301074;30032202 116902950 MODEL JAAIVD010000024;XM_032905276 XP_032761167 protein-coding 626077312 Rtl1 retrotransposon Gag like 1 INVOLVED IN angiogenesis (ortholog); embryonic placenta development (ortholog); gene expression (ortholog); FOUND IN Z disc (ortholog) 7 127142348 127147764 - 116905463 MODEL JAAIVD010000026;XM_032908428 XP_032764319 retrotransposon-like protein 1 protein-coding 626077317 LOC116887271 elongation factor 1-beta-like 18 29225960 29226690 - 22301074;30032202 116887271 MODEL JAAIVD010000013;XM_032888841 XP_032744732 protein-coding 626077322 LOC116910252 60S ribosomal protein L30-like 9 31358977 31360161 - 30032202 116910252 MODEL JAAIVD010000002;XM_032914142 XP_032770033 protein-coding 626077326 Psma5 proteasome 20S subunit alpha 5 ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); osteoporosis (ortholog); steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 3 49977003 49999702 - 22301074;30032202 116896366 MODEL JAAIVD010000012;XM_032897482 XP_032753373 proteasome subunit alpha type-5 protein-coding 626077339 LOC116906172 glyceraldehyde-3-phosphate dehydrogenase-like 7 105095844 105146144 - 116906172 MODEL JAAIVD010000026 pseudo 626077340 Pacsin1 protein kinase C and casein kinase substrate in neurons 1 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); negative regulation of endocytosis (ortholog); neuron projection morphogenesis (ortholog); FOUND IN axon terminus (ortholog); COPI-coated vesicle (ortholog); cytoplasm (ortholog) 18 6143716 6191238 - 22301074;30032202 116886868 MODEL JAAIVD010000013;XM_032888324;XM_032888325;XM_032888326;XM_032888327 XP_032744215;XP_032744216;XP_032744217;XP_032744218 protein kinase C and casein kinase substrate in neurons protein 1 protein-coding 626077363 Atp6v0a2 ATPase H+ transporting V0 subunit a2 INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Autosomal Recessive Cutis Laxa (ortholog); autosomal recessive cutis laxa type IIA (ortholog); congenital disorder of glycosylation Il (ortholog); FOUND IN acrosomal vesicle (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) 16 29220240 29264928 - 22301074;30032202 116885944 MODEL JAAIVD010000004;XM_032887262 XP_032743153 V-type proton ATPase 116 kDa subunit a protein-coding 626077395 Lmod1 leiomodin 1 INVOLVED IN actin nucleation (ortholog); positive regulation of actin filament polymerization (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); endometriosis (ortholog); intestinal pseudo-obstruction (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); myofibril (ortholog) 10 355525 397050 - 22301074;30032202 116911586 MODEL JAAIVD010000005;XM_032915564 XP_032771455 leiomodin-1 protein-coding 626077402 Tubgcp3 tubulin gamma complex component 3 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cytoplasm (ortholog) 13 71021299 71080789 + 22301074;30032202 116914446 MODEL JAAIVD010000008;XM_032918747;XM_032918748 XP_032774638;XP_032774639 gamma-tubulin complex component 3;tubulin gamma complex associated protein 3 protein-coding 626077430 Rskr ribosomal protein S6 kinase related 9 92144261 92148338 - 22301074;30032202 116910481 MODEL JAAIVD010000002;XM_032914363;XM_032914364 XP_032770254;XP_032770255 ribosomal protein S6 kinase-related protein protein-coding 626077447 LOC116887815 cylicin-1-like X 31537944 31545023 - 30032202 116887815 MODEL JAAIVD010000014;XM_032889337 XP_032745228 protein-coding 626077454 Ctdsp2 CTD small phosphatase 2 ENCODES a protein that exhibits RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN negative regulation of G1/S transition of mitotic cell cycle (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway 1 205412259 205432433 + 22301074;30032202 116909741 MODEL JAAIVD010000025;XM_032913422 XP_032769313 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 protein-coding 626077466 LOC116895440 peflin-like 3 69504084 69504888 - 116895440 MODEL JAAIVD010000012 pseudo 626077467 Arsb arylsulfatase B ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-acetylgalactosamine-4-sulfatase activity (ortholog); N-acetylgalactosamine-6-sulfatase activity (ortholog); INVOLVED IN anterior head development (ortholog); autophagy (ortholog); colon epithelial cell migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); metachromatic leukodystrophy (ortholog); FOUND IN cell surface (ortholog); lysosome (ortholog) 3 202392453 202567227 - 116897289 MODEL JAAIVD010000012;XM_032899021;XM_032899022 XP_032754912;XP_032754913 protein-coding 626077484 LOC116907126 protein S100-A11-like 8 19945102 19945389 - 30032202 116907126 MODEL JAAIVD010000027;XM_032910101 XP_032765992 protein-coding 626077487 LOC116899960 high mobility group protein B1-like 5 51150507 51151305 + 116899960 MODEL JAAIVD010000023 pseudo 626077488 LOC116888100 stathmin-like X 98097314 98100035 + 116888100 MODEL JAAIVD010000014 pseudo 626077489 Snrpa small nuclear ribonucleoprotein polypeptide A ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); RNA binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); connective tissue disease (ortholog); FOUND IN nucleoplasm (ortholog); spliceosomal complex (ortholog); U1 snRNP (ortholog) 2 168741615 168755256 + 30032202 116892441 MODEL JAAIVD010000001;XM_032894134;XM_032894135;XM_032894136 XP_032750025;XP_032750026;XP_032750027 U1 small nuclear ribonucleoprotein A protein-coding 626077508 Npepl1 aminopeptidase like 1 5 143860975 143873341 - 22301074;30032202 116902270 MODEL JAAIVD010000023;XM_032904700 XP_032760591 probable aminopeptidase NPEPL1 protein-coding 626077525 LOC116893077 cystatin-B-like 2 43307327 43307619 + 116893077 MODEL JAAIVD010000001 pseudo 626077526 Cdnf cerebral dopamine neurotrophic factor 14 9956386 9970907 + 30032202 116883728 MODEL JAAIVD010000009;XM_032884961 XP_032740852 protein-coding 626077534 Cotl1 coactosin like F-actin binding protein 1 ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); INVOLVED IN defense response to fungus (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 17 39462424 39495148 - 30032202 116886403 MODEL JAAIVD010000011;XM_032887874 XP_032743765 coactosin-like protein protein-coding 626077542 LOC116908614 keratin-associated protein 4-7-like 9 54653538 54654101 + 22301074 116908614 MODEL JAAIVD010000002;XM_032911846 XP_032767737 protein-coding 626077545 LOC116900292 olfactory receptor 8J3-like 5 63631142 63632089 - 22301074;30032202 116900292 MODEL JAAIVD010000023;XM_032902047 XP_032757938 protein-coding 626077548 LOC116915131 small nucleolar RNA SNORA17 13 67096914 67097033 - 116915131 MODEL JAAIVD010000008 pseudo 626077549 Brca2 BRCA2 DNA repair associated ENCODES a protein that exhibits gamma-tubulin binding (ortholog); histone acetyltransferase activity (ortholog); histone H3 acetyltransferase activity (ortholog); INVOLVED IN brain development (ortholog); cell population proliferation (ortholog); cellular response to ionizing radiation (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH atrophy of testis (ortholog); bilateral breast cancer (ortholog); breast cancer (ortholog); FOUND IN BRCA2-MAGE-D1 complex (ortholog); centrosome (ortholog); chromosome (ortholog) 16 82520 125667 + 22301074;30032202 116885559 MODEL JAAIVD010000004;XM_032886852 XP_032742743 breast cancer type 2 susceptibility protein protein-coding 626077580 LOC116892843 very-long-chain enoyl-CoA reductase-like 2 192129756 192130881 + 22301074;30032202 116892843 MODEL JAAIVD010000001;XM_032894732 XP_032750623 protein-coding 626077585 LOC116898625 ATP-dependent RNA helicase DDX42-like 1 98960927 98965620 - 116898625 MODEL JAAIVD010000025 pseudo 626077586 Znf469 zinc finger protein 469 INVOLVED IN cell-matrix adhesion (ortholog); collagen fibril organization (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Brittle Cornea Syndrome (ortholog); brittle cornea syndrome 1 (ortholog); connective tissue disease (ortholog) 17 41890954 41902845 + 116886542 MODEL JAAIVD010000011;XM_032888062 XP_032743953 protein-coding 626077590 LOC116886977 uncharacterized LOC116886977 18 41240593 41400665 - 116886977 MODEL JAAIVD010000013;XM_032888467 XP_032744358 uncharacterized protein LOC116886977 protein-coding 626077639 Med10 mediator complex subunit 10 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 2 201227725 201233423 + 22301074;30032202 116892909 MODEL JAAIVD010000001;XM_032894830 XP_032750721 mediator of RNA polymerase II transcription subunit 10 protein-coding 626077647 Pkp4 plakophilin 4 INVOLVED IN cell-cell junction assembly (ortholog); positive regulation of cytokinesis (ortholog); regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cell junction (ortholog); cell-cell contact zone (ortholog); cell-cell junction (ortholog) 5 36844479 37047033 + 30032202 116901432 MODEL JAAIVD010000023;XM_032903325;XM_032903326;XM_032903327;XM_032903328;XM_032903329;XM_032903330;XM_032903331;XM_032903332;XM_032903333;XM_032903334;XM_032903335;XM_032903336;XM_032903338;XM_032903339;XM_032903340;XM_032903341;XM_032903342 XP_032759216;XP_032759217;XP_032759218;XP_032759219;XP_032759220;XP_032759221;XP_032759222;XP_032759223;XP_032759224;XP_032759225;XP_032759226;XP_032759227;XP_032759229;XP_032759230;XP_032759231;XP_032759232;XP_032759233 plakophilin-4 protein-coding 626077701 Ferry3 FERRY endosomal RAB5 effector complex subunit 3 INVOLVED IN regulation of mast cell degranulation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autosomal recessive intellectual developmental disorder 66 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); protein-containing complex (ortholog) 6 20930700 20966389 - 30032202 116903237 MODEL JAAIVD010000024;XM_032905615 XP_032761506 C6H12orf4 chromosome 6 C12orf4 homolog;protein C12orf4 homolog protein-coding 626077719 LOC116908408 small nucleolar RNA SNORA17 8 72251027 72251153 - 116908408 MODEL JAAIVD010000027;XR_004388951 snorna 626077722 Ywhah tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein eta ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN glucocorticoid catabolic process (ortholog); intracellular protein transport (ortholog); membrane depolarization during action potential (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 11 71806411 71815794 - 30032202 116912187 MODEL JAAIVD010000006;XM_032916122 XP_032772013 14-3-3 protein eta protein-coding 626077728 LOC116894286 60S ribosomal protein L27-like 2 129362331 129362696 + 22301074;30032202 116894286 MODEL JAAIVD010000001;XM_032895993 XP_032751884 protein-coding 626077731 LOC116902511 small nucleolar RNA SNORA71 5 137706414 137706543 - 116902511 MODEL JAAIVD010000023;XR_004388120 snorna 626077734 LOC116904544 taste receptor type 2 member 114 6 16641820 16642749 + 22301074;30032202 116904544 MODEL JAAIVD010000024;XM_032907337 XP_032763228 protein-coding 626077737 LOC116894985 small nucleolar RNA SNORA21 2 80814694 80814829 + 116894985 MODEL JAAIVD010000001;XR_004387176 snorna 626077740 LOC116899772 U6 spliceosomal RNA 4 32212323 32212425 + 116899772 MODEL JAAIVD010000003;XR_004387785 snrna 626077743 Pus7 pseudouridine synthase 7 ENCODES a protein that exhibits enzyme binding (ortholog); pseudouridine synthase activity (ortholog); tRNA pseudouridine(13) synthase activity (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); negative regulation of translation (ortholog); regulation of hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual developmental disorder with abnormal behavior, microcephaly, and short stature (ortholog); FOUND IN nucleus (ortholog) 6 152972799 153014568 - 22301074;30032202 116904192 MODEL JAAIVD010000024;XM_032907105 XP_032762996 pseudouridylate synthase 7 homolog protein-coding 626077763 Zc3h6 zinc finger CCCH-type containing 6 5 107743867 107792919 + 22301074;30032202 116901952 MODEL JAAIVD010000023;XM_032904186;XM_032904187;XM_032904188;XM_032904189 XP_032760077;XP_032760078;XP_032760079;XP_032760080 zinc finger CCCH domain-containing protein 6 protein-coding 626077786 Chaf1b chromatin assembly factor 1 subunit B INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); glioblastoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); nucleoplasm (ortholog) 4 50744405 50764245 - 22301074;30032202 116897970 MODEL JAAIVD010000003;XM_032899370 XP_032755261 protein-coding 626077803 Prxl2c peroxiredoxin like 2C INVOLVED IN positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of glycolytic process (ortholog) 14 75251967 75274240 + 116883176 MODEL JAAIVD010000009;XM_032884214;XM_032884215 XP_032740105;XP_032740106 peroxiredoxin-like 2C protein-coding 626077816 Rpap1 RNA polymerase II associated protein 1 5 97930790 97949357 - 30032202 116901821 MODEL JAAIVD010000023;XM_032903979 XP_032759870 RNA polymerase II-associated protein 1 protein-coding 626077844 LOC116892757 vomeronasal type-1 receptor 4-like 2 181960349 181961314 - 116892757 MODEL JAAIVD010000001 pseudo 626077845 Sbno1 strawberry notch homolog 1 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuroinflammatory response (ortholog); ASSOCIATED WITH Knee Osteoarthritis (ortholog); prostate cancer (ortholog); schizophrenia (ortholog); FOUND IN nucleus (ortholog) 16 29446595 29500429 + 30032202 116885950 MODEL JAAIVD010000004;XM_032887269 XP_032743160 protein strawberry notch homolog 1 protein-coding 626077881 Bpifa1 BPI fold containing family A member 1 INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); immune response in nasopharyngeal-associated lymphoid tissue (ortholog); ASSOCIATED WITH fetal alcohol spectrum disorder (ortholog); Inflammation (ortholog); otitis media (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); microvillus (ortholog) 5 133481788 133487704 + 22301074;30032202 116900719 MODEL JAAIVD010000023;XM_032902425;XM_032902426 XP_032758316;XP_032758317 BPI fold-containing family A member 1 protein-coding 626077900 Ubqln3 ubiquilin 3 2 101511527 101514175 + 30032202 116893992 MODEL JAAIVD010000001;XM_032895706 XP_032751597 ubiquilin-3 protein-coding 626077906 LOC116894005 transmembrane emp24 domain-containing protein 5-like 2 101645626 101646313 + 116894005 MODEL JAAIVD010000001 pseudo 626077907 LOC116900063 uncharacterized LOC116900063 5 6968801 6969403 - 116900063 MODEL JAAIVD010000023;XR_004387913 ncrna 626077912 LOC116911667 olfactory receptor 6N1 10 52776773 52777711 + 22301074 116911667 MODEL JAAIVD010000005;XM_032915622 XP_032771513 protein-coding 626077915 LOC116893082 zinc finger CCCH domain-containing protein 15-like 2 51084004 51087885 - 116893082 MODEL JAAIVD010000001 pseudo 626077916 LOC116897921 uncharacterized LOC116897921 1 91241373 91326732 + 116897921 MODEL JAAIVD010000025;XM_032899355 XP_032755246 uncharacterized protein LOC116897921 protein-coding 626077926 Smc5 structural maintenance of chromosomes 5 ENCODES a protein that exhibits DNA secondary structure binding (ortholog); INVOLVED IN cellular senescence (ortholog); chromosome condensation (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); Mosaic Variegated Aneuploidy Syndrome 6 (ortholog); FOUND IN cell junction (ortholog); chromosome, centromeric region (ortholog); chromosome, telomeric region (ortholog) 2 23268695 23330614 - 30032202 116891039 MODEL JAAIVD010000001;XM_032891721;XM_032891722 XP_032747612;XP_032747613 structural maintenance of chromosomes protein 5 protein-coding 626077956 Cxcl16 C-X-C motif chemokine ligand 16 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); systemic scleroderma (ortholog); FOUND IN extracellular space (ortholog); membrane (ortholog) 9 50065268 50069764 - 30032202 116909680 A0A6M6RKZ5 MODEL JAAIVD010000002;XM_032913339 XP_032769230 C-X-C motif chemokine 16 protein-coding 626077965 Gdf7 growth differentiation factor 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); axon guidance (ortholog); BMP signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 7 28638565 28642879 - 22301074;30032202 116905686 MODEL JAAIVD010000026;XM_032908669;XM_032908671 XP_032764560;XP_032764562 growth/differentiation factor 7 protein-coding 626077975 LOC116885030 small nucleolar RNA SNORA33 15 63417777 63417905 + 116885030 MODEL JAAIVD010000010;XR_004385917 snorna 626077978 LOC116897805 heterogeneous nuclear ribonucleoprotein H2-like 4 10230736 10232311 - 116897805 MODEL JAAIVD010000003 pseudo 626077979 LOC116897880 uncharacterized LOC116897880 4 24203136 24205338 + 116897880 MODEL JAAIVD010000003;XR_004387628 ncrna 626077984 Lamb3 laminin subunit beta 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); endodermal cell differentiation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1A (ortholog); autistic disorder (ortholog); FOUND IN basement membrane (ortholog); laminin-5 complex (ortholog) 10 71287722 71327688 + 30032202 116911356 MODEL JAAIVD010000005;XM_032915276 XP_032771167 laminin subunit beta-3 protein-coding 626078009 Klf14 KLF transcription factor 14 ENCODES a protein that exhibits chromatin binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN positive regulation of sphingolipid mediated signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Dyslipidemias (ortholog); Insulin Resistance (ortholog); type 2 diabetes mellitus (ortholog) 6 108638024 108640938 + 30032202 116902905 MODEL JAAIVD010000024;XM_032905230 XP_032761121 Krueppel-like factor 14;Kruppel like factor 14 protein-coding 626078014 Mcm5 minichromosome maintenance complex component 5 INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Meier-Gorlin syndrome 8 (ortholog); FOUND IN CMG complex (ortholog); MCM complex (ortholog); nucleoplasm (ortholog) 17 4495886 4515888 + 22301074;30032202 116886500 MODEL JAAIVD010000011;XM_032888003 XP_032743894 DNA replication licensing factor MCM5 protein-coding 626078035 Fchsd1 FCH and double SH3 domains 1 INVOLVED IN apoptotic process (ortholog); gene expression (ortholog); import into nucleus (ortholog); FOUND IN cuticular plate (ortholog); cytosol (ortholog); protein-containing complex (ortholog) 15 6952808 6963430 + 22301074;30032202 116884563 MODEL JAAIVD010000010;XM_032885705 XP_032741596 F-BAR and double SH3 domains protein 1 protein-coding 626078059 LOC116903354 uncharacterized LOC116903354 6 28802110 28820440 - 116903354 MODEL JAAIVD010000024;XR_004388272 ncrna 626078065 Arpc5 actin related protein 2/3 complex subunit 5 ENCODES a protein that exhibits actin filament binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN actin filament network formation (ortholog); Arp2/3 complex-mediated actin nucleation (ortholog); cell migration (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH congenital hypothyroidism (ortholog); Experimental Autoimmune Myasthenia Gravis (ortholog); genetic disease (ortholog); FOUND IN Arp2/3 protein complex (ortholog); endosome (ortholog); glutamatergic synapse (ortholog) 10 32220805 32229963 + 22301074;30032202 116911429 MODEL JAAIVD010000005;XM_032915398 XP_032771289 actin-related protein 2/3 complex subunit 5 protein-coding 626078073 LOC116888168 X-linked lymphocyte-regulated protein PM1-like X 116904346 116922348 + 30032202 116888168 MODEL JAAIVD010000014;XM_032889490 XP_032745381 protein-coding 626078084 LOC116887554 HLA class II histocompatibility antigen, DO beta chain-like 18 8093455 8102147 - 116887554 MODEL JAAIVD010000013 pseudo 626078085 LOC116903371 60S ribosomal protein L9-like 6 30484759 30485806 + 116903371 MODEL JAAIVD010000024 pseudo 626078086 Strn3 striatin 3 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); protein kinase binding (ortholog); protein phosphatase 2A binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of hippo signaling (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); FAR/SIN/STRIPAK complex (ortholog) 7 65041391 65127052 - 30032202 116905035 MODEL JAAIVD010000026;XM_032907713;XM_032907714;XM_032907715;XM_032907717 XP_032763604;XP_032763605;XP_032763606;XP_032763608 striatin-3 protein-coding 626078117 LOC116902650 small nucleolar RNA U3 5 152267874 152267998 + 116902650 MODEL JAAIVD010000023 pseudo 626078118 LOC116909368 olfactory receptor 1361-like 9 38691646 38692587 - 22301074;30032202 116909368 MODEL JAAIVD010000002;XM_032912918 XP_032768809 protein-coding 626078121 LOC116896971 EGF-like and EMI domain-containing protein 1 3 123355757 123922118 + 22301074 116896971 MODEL JAAIVD010000012;XM_032898550 XP_032754441 protein-coding 626078137 C15H18orf32 chromosome 15 C18orf32 homolog INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 25 (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) 15 56970176 56978743 - 30032202 116884495 MODEL JAAIVD010000010;XM_032885617;XM_032885618 XP_032741508;XP_032741509 UPF0729 protein C18orf32 homolog protein-coding 626078147 Cops7a COP9 signalosome subunit 7A INVOLVED IN protein deneddylation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN COP9 signalosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 22923716 22931189 + 22301074;30032202 116903267 MODEL JAAIVD010000024;XM_032905677;XM_032905678;XM_032905679 XP_032761568;XP_032761569;XP_032761570 COP9 signalosome complex subunit 7a protein-coding 626078163 LOC116893149 peptidyl-prolyl cis-trans isomerase D-like 2 97773871 97774532 - 116893149 MODEL JAAIVD010000001 pseudo 626078164 Tmod4 tropomodulin 4 ENCODES a protein that exhibits tropomyosin binding (ortholog); FOUND IN striated muscle thin filament (ortholog) 3 62121110 62125981 - 22301074;30032202 116896565 MODEL JAAIVD010000012;XM_032897770;XM_032897771;XM_032897773 XP_032753661;XP_032753662;XP_032753664 tropomodulin-4 protein-coding 626078184 LOC116892786 zinc finger protein 420-like 2 185526767 185578768 - 22301074 116892786 MODEL JAAIVD010000001;XM_032894659 XP_032750550 protein-coding 626078193 Slc22a3 solute carrier family 22 member 3 ENCODES a protein that exhibits dopamine:sodium symporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); neurotransmitter transmembrane transporter activity (ortholog); INVOLVED IN cellular detoxification (ortholog); dopamine transport (ortholog); dopamine uptake (ortholog); PARTICIPATES IN lamivudine pharmacokinetics pathway; metformin pharmacokinetics pathway; ASSOCIATED WITH Coxsackievirus Infections (ortholog); Kidney Neoplasms (ortholog); myocarditis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); endomembrane system (ortholog) 2 191160580 191251113 - 22301074 116892824 MODEL JAAIVD010000001;XM_032894709 XP_032750600 protein-coding 626078208 LOC116915030 non-POU domain-containing octamer-binding protein-like 13 11634615 11636006 + 116915030 MODEL JAAIVD010000008 pseudo 626078209 P2ry6 pyrimidinergic receptor P2Y6 ENCODES a protein that exhibits G protein-coupled ADP receptor activity (ortholog); G protein-coupled UDP receptor activity (ortholog); G protein-coupled UTP receptor activity (ortholog); INVOLVED IN cellular response to prostaglandin E stimulus (ortholog); cellular response to purine-containing compound (ortholog); cellular response to pyrimidine ribonucleotide (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 99235873 99262397 - 22301074;30032202 116893967 MODEL JAAIVD010000001;XM_032895686 XP_032751577 P2Y purinoceptor 6 protein-coding 626078216 Sharpin SHANK associated RH domain interactor ENCODES a protein that exhibits identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); defense response to bacterium (ortholog); epidermis development (ortholog); PARTICIPATES IN integrin mediated signaling pathway; nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); AUTOINFLAMMATION WITH EPISODIC FEVER AND IMMUNE DYSREGULATION (ortholog); dermatitis (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 1 248681587 248685897 - 30032202 116913106 MODEL JAAIVD010000025;XM_032917251;XM_032917260 XP_032773142;XP_032773151 protein-coding 626078231 Igf2r insulin like growth factor 2 receptor ENCODES a protein that exhibits D-mannose binding (ortholog); enzyme binding (ortholog); G-protein alpha-subunit binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); G protein-coupled receptor signaling pathway (ortholog); liver development (ortholog); PARTICIPATES IN renin-angiotensin cascade pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Beckwith-Wiedemann syndrome (ortholog); FOUND IN cell surface (ortholog); clathrin coat (ortholog); early endosome (ortholog) 2 191414064 191502120 - 22301074;30032202 116892829 MODEL JAAIVD010000001;XM_032894713 XP_032750604 cation-independent mannose-6-phosphate receptor protein-coding 626078283 Znf2 zinc finger protein 2 5 106353019 106374345 - 30032202 116901937 MODEL JAAIVD010000023;XM_032904165;XM_032904166;XM_032904167 XP_032760056;XP_032760057;XP_032760058 protein-coding 626078302 Gpr180 G protein-coupled receptor 180 INVOLVED IN fat cell differentiation (ortholog); gene expression (ortholog); generation of precursor metabolites and energy (ortholog) 12 7772331 7802525 - 22301074 116913454 MODEL JAAIVD010000007;XM_032917652;XM_032917653 XP_032773543;XP_032773544 integral membrane protein GPR180 protein-coding 626078319 LOC116885614 CD209 antigen-like protein E 16 1712303 1717750 - 116885614 MODEL JAAIVD010000004;XM_032886913 XP_032742804 protein-coding 626078329 LOC116886200 uncharacterized LOC116886200 17 14031278 14035933 + 116886200 MODEL JAAIVD010000011;XR_004386095 ncrna 626078333 Bltp1 bridge-like lipid transfer protein family member 1 INVOLVED IN endocytic recycling (ortholog); endosomal transport (ortholog); lipid transport (ortholog); ASSOCIATED WITH Alkuraya-Kucinskas syndrome (ortholog); clubfoot (ortholog); Dandy-Walker syndrome (ortholog) 3 116972288 117154364 - 30032202 116896924 MODEL JAAIVD010000012;XM_032898488 XP_032754379 Kiaa1109 transmembrane protein KIAA1109 homolog protein-coding 626078423 LOC116885859 60S ribosomal protein L18a-like 16 6434039 6434524 - 116885859 MODEL JAAIVD010000004 pseudo 626078424 LOC116906751 uncharacterized LOC116906751 8 28402303 28404272 - 116906751 MODEL JAAIVD010000027;XR_004388768 ncrna 626078429 LOC116889634 Y-linked testis-specific protein 1-like 22301074;30032202 116889634 MODEL JAAIVD010000019;XM_032890546 XP_032746437 protein-coding 626078430 LOC116888464 trophinin-like X 19957695 19968714 + 116888464 MODEL JAAIVD010000014;XM_032889744 XP_032745635 protein-coding 626078448 LOC116904708 small nucleolar RNA SNORA17 6 84539501 84539634 + 116904708 MODEL JAAIVD010000024;XR_004388403 snorna 626078451 LOC116890207 keratin, type II cytoskeletal 72 1 261288024 261297210 + 22301074;30032202 116890207 MODEL JAAIVD010000025;XM_032890941;XM_032890942 XP_032746832;XP_032746833 protein-coding 626078463 LOC116888700 zinc finger protein 81-like X 3656829 3658506 + 116888700 MODEL JAAIVD010000014;XM_032889990 XP_032745881 protein-coding 626078468 LOC116889627 myosin regulatory light chain 12B-like Y 1829835 1834228 + 116889627 MODEL JAAIVD010000015 pseudo 626078469 LOC116894978 small nucleolar RNA SNORA20 2 98241035 98241167 + 116894978 MODEL JAAIVD010000001;XR_004387169 snorna 626078472 LOC116889988 60S ribosomal protein L36a-like 1 174268332 174268684 + 116889988 MODEL JAAIVD010000025 pseudo 626078473 LOC116894895 U1 spliceosomal RNA 2 73851794 73851954 + 116894895 MODEL JAAIVD010000001;XR_004387100 snrna 626078476 Phkg2 phosphorylase kinase catalytic subunit gamma 2 ENCODES a protein that exhibits ATP binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); positive regulation of glycogen catabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH familial lipoprotein lipase deficiency (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); phosphorylase kinase complex (ortholog) 2 74317432 74329619 - 22301074 116891466 MODEL JAAIVD010000001;XM_032892557;XM_032892558;XM_032892559 XP_032748448;XP_032748449;XP_032748450 phosphorylase b kinase gamma catalytic chain, liver/testis isoform protein-coding 626078496 LOC116889350 alpha-enolase-like 1 132261430 132262672 + 116889350 MODEL JAAIVD010000025 pseudo 626078497 Aldh1l2 aldehyde dehydrogenase 1 family member L2 ENCODES a protein that exhibits formyltetrahydrofolate dehydrogenase activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); fatty acid beta-oxidation (ortholog); folic acid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 1 164974154 165023476 + 22301074;30032202 116907517 MODEL JAAIVD010000025;XM_032910523 XP_032766414 mitochondrial 10-formyltetrahydrofolate dehydrogenase protein-coding 626078524 Swt1 SWT1 RNA endoribonuclease homolog 10 30797837 30856732 - 30032202 116911057 MODEL JAAIVD010000005;XM_032914811;XM_032914812 XP_032770702;XP_032770703 transcriptional protein SWT1 protein-coding 626078553 Tm2d1 TM2 domain containing 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 1 56091690 56132721 + 30032202 116900037 MODEL JAAIVD010000025;XM_032901836;XM_032901842 XP_032757727;XP_032757733 TM2 domain-containing protein 1 protein-coding 626078569 LOC116887334 olfactory receptor 14J1-like 18 10712046 10713011 + 22301074 116887334 MODEL JAAIVD010000013;XM_032888927 XP_032744818 protein-coding 626078573 Igfbp4 insulin like growth factor binding protein 4 ENCODES a protein that exhibits insulin-like growth factor binding (ortholog); INVOLVED IN positive regulation of insulin-like growth factor receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); regulation of cell growth (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN extracellular space (ortholog) 9 55389719 55402152 - 22301074;30032202 116909734 MODEL JAAIVD010000002;XM_032913410 XP_032769301 insulin-like growth factor-binding protein 4 protein-coding 626078581 LOC116890521 small nucleolar RNA SNORA17 1 228105183 228105314 - 116890521 MODEL JAAIVD010000025;XR_004386703 snorna 626078584 LOC116893484 killer cell immunoglobulin-like receptor 3DL1 2 180914828 180952949 - 30032202 116893484 MODEL JAAIVD010000001;XM_032895234 XP_032751125 protein-coding 626078596 LOC116890405 U6 spliceosomal RNA 1 268452876 268452979 - 116890405 MODEL JAAIVD010000025;XR_004386607 snrna 626078599 LOC116914146 small nucleolar RNA SNORA17 12 89200976 89201095 - 116914146 MODEL JAAIVD010000007 pseudo 626078600 Rmdn1 regulator of microtubule dynamics 1 ENCODES a protein that exhibits microtubule binding (ortholog); FOUND IN mitochondrion (ortholog); mitotic spindle pole (ortholog); spindle microtubule (ortholog) 1 124116065 124139702 - 30032202 116903106 MODEL JAAIVD010000025;XM_032905435 XP_032761326 regulator of microtubule dynamics protein 1 protein-coding 626078614 Pla2g3 phospholipase A2 group III ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); phospholipase activity (ortholog); INVOLVED IN acrosome assembly (ortholog); cell development (ortholog); cell maturation (ortholog); FOUND IN centriole (ortholog); recycling endosome (ortholog) 11 72483599 72490231 + 22301074 116912259 MODEL JAAIVD010000006;XM_032916244 XP_032772135 group 3 secretory phospholipase A2 protein-coding 626078625 Rbp1 retinol binding protein 1 ENCODES a protein that exhibits all-trans-retinol binding (ortholog); retinol binding (ortholog); INVOLVED IN lipid homeostasis (ortholog); lipid storage (ortholog); regulation of granulocyte differentiation (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 89800189 89821304 + 22301074;30032202 116906939 MODEL JAAIVD010000027;XM_032909863 XP_032765754 retinol-binding protein 1 protein-coding 626078632 Nutf2 nuclear transport factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); nuclear import signal receptor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of vascular endothelial growth factor production (ortholog); positive regulation of protein import into nucleus (ortholog); protein export from nucleus (ortholog); ASSOCIATED WITH diabetic retinopathy (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nuclear outer membrane (ortholog) 17 25598767 25619295 + 30032202 116886286 MODEL JAAIVD010000011;XM_032887715;XM_032887716 XP_032743606;XP_032743607 protein-coding 626078644 Itprid1 ITPR interacting domain containing 1 6 85084597 85215765 - 22301074 116902820 MODEL JAAIVD010000024;XM_032905149 XP_032761040 protein ITPRID1 protein-coding 626078662 Eprs1 glutamyl-prolyl-tRNA synthetase 1 ENCODES a protein that exhibits glutamate-tRNA ligase activity (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to type II interferon (ortholog); glutamyl-tRNA aminoacylation (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 15 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 63514087 63582249 + 22301074;30032202 116911640 MODEL JAAIVD010000005;XM_032915598 XP_032771489 bifunctional glutamate/proline--tRNA ligase protein-coding 626078699 Ppm1a protein phosphatase, Mg2+/Mn2+ dependent 1A ENCODES a protein that exhibits calmodulin-dependent protein phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); N-terminal protein myristoylation (ortholog); negative regulation of BMP signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; FOUND IN cytosol (ortholog); membrane (ortholog); neuron projection (ortholog) 7 87030936 87069267 + 22301074;30032202 116905156 MODEL JAAIVD010000026;XM_032907928 XP_032763819 protein phosphatase 1A protein-coding 626078709 Cers5 ceramide synthase 5 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); sphingolipid biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 272533441 272572017 - 22301074;30032202 116885239 MODEL JAAIVD010000025;XM_032886480;XM_032886488;XM_032886495 XP_032742371;XP_032742379;XP_032742386 protein-coding 626078729 LOC116907738 olfactory receptor 7G2-like 8 15139840 15140778 + 22301074;30032202 116907738 MODEL JAAIVD010000027;XM_032910876 XP_032766767 protein-coding 626078732 LOC116897634 small nucleolar RNA SNORA47 3 200997975 200998111 - 116897634 MODEL JAAIVD010000012;XR_004387613 snorna 626078735 LOC116907898 translation initiation factor IF-2-like 8 11263346 11294231 + 116907898 MODEL JAAIVD010000027;XM_032911094;XM_032911096;XR_004388853 XP_032766985;XP_032766987 protein-coding 626078747 LOC116908386 small nucleolar RNA SNORA48 8 72508102 72508240 - 116908386 MODEL JAAIVD010000027;XR_004388931 snorna 626078750 LOC116912368 glyceraldehyde-3-phosphate dehydrogenase-like 1 170472061 170472989 - 116912368 MODEL JAAIVD010000025 pseudo 626078751 Smim13 small integral membrane protein 13 14 60243528 60257690 + 116883424 MODEL JAAIVD010000009;XM_032884555 XP_032740446 protein-coding 626078757 LOC116889426 U6 spliceosomal RNA X 118758969 118759075 + 116889426 MODEL JAAIVD010000014;XR_004386391 snrna 626078760 LOC116897620 small nucleolar RNA SNORA40 3 198672375 198672505 - 116897620 MODEL JAAIVD010000012;XR_004387601 snorna 626078763 S100a1 S100 calcium binding protein A1 ENCODES a protein that exhibits ATPase binding (ortholog); calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of sprouting angiogenesis (ortholog); positive regulation of voltage-gated calcium channel activity (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); intracranial vasospasm (ortholog); Myocardial Ischemia (ortholog); FOUND IN A band (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 3 63105273 63110576 + 22301074;30032202 116896601 MODEL JAAIVD010000012;XM_032897853 XP_032753744 protein S100-A1 protein-coding 626078770 LOC116902974 60S ribosomal protein L17-like 6 131176712 131177237 - 116902974 MODEL JAAIVD010000024 pseudo 626078771 LOC116900451 olfactory receptor 4C15-like 5 71050268 71051230 - 22301074 116900451 MODEL JAAIVD010000023;XM_032902192 XP_032758083 protein-coding 626078775 Dennd1a DENN domain containing 1A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); phosphatidylinositol phosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN endocytic recycling (ortholog); endocytosis (ortholog); positive regulation of GTPase activity (ortholog); FOUND IN clathrin-coated vesicle (ortholog); clathrin-coated vesicle membrane (ortholog); cytosol (ortholog) 5 15565667 16055794 - 30032202 116901362 MODEL JAAIVD010000023;XM_032903214;XM_032903215;XM_032903216;XM_032903217;XM_032903218;XM_032903219;XM_032903221 XP_032759105;XP_032759106;XP_032759107;XP_032759108;XP_032759109;XP_032759110;XP_032759112 DENN domain-containing protein 1A protein-coding 626078813 LOC116885866 elongation factor 1-gamma-like 16 9113358 9118259 + 116885866 MODEL JAAIVD010000004 pseudo 626078814 LOC116906379 small nucleolar RNA SNORD113/SNORD114 family 7 127242942 127243016 + 116906379 MODEL JAAIVD010000026;XR_004388649 snorna 626078817 Strada STE20 related adaptor alpha ENCODES a protein that exhibits kinase binding (ortholog); protein kinase activator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); G1 to G0 transition (ortholog); protein export from nucleus (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intracellular protein-containing complex (ortholog) 9 72926974 72955347 + 22301074;30032202 116908848 MODEL JAAIVD010000002;XM_032912278;XM_032912279;XM_032912280;XM_032912281;XM_032912282;XM_032912283;XM_032912284;XM_032912285;XM_032912287;XM_032912288;XM_032912289 XP_032768169;XP_032768170;XP_032768171;XP_032768172;XP_032768173;XP_032768174;XP_032768175;XP_032768176;XP_032768178;XP_032768179;XP_032768180 STE20-related kinase adapter protein alpha protein-coding 626078854 LOC116893858 olfactory receptor 13A1-like 2 61499874 61500803 - 22301074 116893858 MODEL JAAIVD010000001;XM_032895578 XP_032751469 protein-coding 626078857 LOC116897382 U5 spliceosomal RNA 3 14942452 14942567 + 116897382 MODEL JAAIVD010000012;XR_004387427 snrna 626078860 Afg2b AAA ATPase AFG2B ENCODES a protein that exhibits identical protein binding (ortholog); preribosome binding (ortholog); INVOLVED IN ribosomal large subunit biogenesis (ortholog); ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 119 (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HEARING LOSS AND SPASTICITY (ortholog); FOUND IN cytoplasm (ortholog); spindle (ortholog) 5 100706534 100719394 + 22301074;30032202 116901892 MODEL JAAIVD010000023;XM_032904100 XP_032759991 Spata5l1 AFG2 AAA ATPase homolog B;spermatogenesis associated 5 like 1;spermatogenesis-associated protein 5-like protein 1 protein-coding 626078872 Las1l LAS1 like ribosome biogenesis factor INVOLVED IN rRNA processing (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN MLL1 complex (ortholog); nucleolus (ortholog) X 54865488 54887118 - 22301074;30032202 116888457 MODEL JAAIVD010000014;XM_032889737 XP_032745628 ribosomal biogenesis protein LAS1L protein-coding 626078890 Cdyl chromodomain Y like ENCODES a protein that exhibits (2E)-butenoyl-CoA hydratase activity (ortholog); chromatin binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of peptidyl-lysine crotonylation (ortholog); random inactivation of X chromosome (ortholog); spermatid development (ortholog); ASSOCIATED WITH epilepsy (ortholog); lung small cell carcinoma (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 14 54426810 54510950 + 30032202 116884066 MODEL JAAIVD010000009;XM_032885315 XP_032741206 chromodomain Y-like protein protein-coding 626078901 LOC116898096 ubiquitin-like 4 95834764 95835140 - 30032202 116898096 MODEL JAAIVD010000003;XM_032899481 XP_032755372 protein-coding 626078905 LOC116904504 olfactory receptor 2Z1-like 6 8628 9578 + 22301074 116904504 MODEL JAAIVD010000024;XM_032907294 XP_032763185 protein-coding 626078908 LOC116910616 solute carrier family 22 member 4 9 36402111 36497842 - 22301074 116910616 MODEL JAAIVD010000002;XM_032914563;XM_032914564;XM_032914566 XP_032770454;XP_032770455;XP_032770457 protein-coding 626078929 LOC116911131 uncharacterized LOC116911131 10 9583942 9595135 - 116911131 MODEL JAAIVD010000005;XR_004389316 ncrna 626078934 Bri3 brain protein I3 ENCODES a protein that exhibits identical protein binding (ortholog) 16 8919539 8942178 - 116885589 MODEL JAAIVD010000004;XM_032886892;XM_032886893 XP_032742783;XP_032742784 protein-coding 626078943 Psap prosaposin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ganglioside GM1 binding (ortholog); ganglioside GM2 binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); antigen processing and presentation (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH atypical Gaucher's disease due to saposin C deficiency (ortholog); Atypical Krabbe Disease due to Saposin A Deficiency (ortholog); combined saposin deficiency (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 18 26100380 26125645 + 22301074;30032202 116886842 MODEL JAAIVD010000013;XM_032888290;XM_032888291;XM_032888292;XM_032888293;XM_032888294 XP_032744181;XP_032744182;XP_032744183;XP_032744184;XP_032744185 protein-coding 626078968 LOC116889465 small nucleolar RNA SNORA70 X 30037869 30037986 + 116889465 MODEL JAAIVD010000014 pseudo 626078969 LOC116897558 small nucleolar RNA SNORA17 3 149629769 149629898 + 116897558 MODEL JAAIVD010000012;XR_004387571 snorna 626078972 LOC116889048 cilia- and flagella-associated protein 47-like X 21542391 21560622 + 116889048 MODEL JAAIVD010000014;XM_032890238 XP_032746129 protein-coding 626078979 Egfl7 EGF like domain multiple 7 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN blood vessel development (ortholog); negative regulation of Notch signaling pathway (ortholog); negative regulation of smooth muscle cell migration (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 5 10495541 10503126 - 22301074;30032202 116901264 MODEL JAAIVD010000023;XM_032903021 XP_032758912 epidermal growth factor-like protein 7 protein-coding 626078992 LOC116901029 sperm motility kinase X-like 5 129740198 129740840 - 116901029 MODEL JAAIVD010000023 pseudo 626078993 Rbm15 RNA binding motif protein 15 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); dosage compensation by inactivation of X chromosome (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH neuroblastoma (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 50917336 50925313 + 30032202 116896391 MODEL JAAIVD010000012;XM_032897521 XP_032753412 RNA-binding protein 15 protein-coding 626078999 LOC116908989 nucleolar RNA helicase 2-like 1 159636898 159641138 + 116908989 MODEL JAAIVD010000025 pseudo 626079000 Rc3h2 ring finger and CCCH-type domains 2 ENCODES a protein that exhibits DNA binding (ortholog); double-stranded RNA binding (ortholog); mRNA binding (ortholog); INVOLVED IN B cell homeostasis (ortholog); limb development (ortholog); lung alveolus development (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog) 5 15135081 15190736 - 22301074 116901352 MODEL JAAIVD010000023;XM_032903199;XM_032903200 XP_032759090;XP_032759091 roquin-2 protein-coding 626079030 Map4k1 mitogen-activated protein kinase kinase kinase kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); MAP kinase kinase kinase kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); intracellular signal transduction (ortholog); ASSOCIATED WITH transient cerebral ischemia (ortholog) 2 166999123 167020462 - 22301074;30032202 116892365 MODEL JAAIVD010000001;XM_032894023 XP_032749914 protein-coding 626079066 LOC116898920 uncharacterized LOC116898920 4 43287952 43289728 - 116898920 MODEL JAAIVD010000003;XR_004387674 ncrna 626079071 Dcx doublecortin ENCODES a protein that exhibits microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN axon extension (ortholog); brain development (ortholog); central nervous system projection neuron axonogenesis (ortholog); ASSOCIATED WITH Abnormal Cortical Gyration (ortholog); alcohol use disorder (ortholog); brain infarction (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) X 95875222 95946856 - 22301074;30032202 116889359 MODEL JAAIVD010000014;XM_032890467 XP_032746358 neuronal migration protein doublecortin protein-coding 626079082 LOC116900760 uncharacterized LOC116900760 5 149835895 149837690 - 116900760 MODEL JAAIVD010000023;XR_004387950 ncrna 626079086 Znf653 zinc finger protein 653 ENCODES a protein that exhibits AF-2 domain binding (ortholog); DNA-binding transcription factor binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN extracellular negative regulation of signal transduction (ortholog); negative regulation of transcription by RNA polymerase II (ortholog) 8 18305120 18323623 - 30032202 116906733 MODEL JAAIVD010000027;XM_032909546;XM_032909547;XM_032909548 XP_032765437;XP_032765438;XP_032765439 protein-coding 626079104 Il22ra2 interleukin 22 receptor subunit alpha 2 ENCODES a protein that exhibits interleukin-22 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN negative regulation of inflammatory response (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN cytosol (ortholog) 2 216938510 216952377 - 22301074;30032202 116894696 MODEL JAAIVD010000001;XM_032896394 XP_032752285 interleukin-22 receptor subunit alpha-2 protein-coding 626079114 Polr2j RNA polymerase II subunit J ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN nucleus (ortholog); RNA polymerase II, core complex (ortholog) 16 17887914 17893218 - 22301074;30032202 116885504 MODEL JAAIVD010000004;XM_032886796 XP_032742687 DNA-directed RNA polymerase II subunit RPB11-a protein-coding 626079122 LOC116906774 zinc finger protein OZF-like 8 16866626 16873858 + 22301074 116906774 MODEL JAAIVD010000027;XM_032909621 XP_032765512 protein-coding 626079131 LOC116904437 ubiquitin-conjugating enzyme E2 variant 1-like 6 118630941 118631453 + 116904437 MODEL JAAIVD010000024 pseudo 626079132 Prr15l proline rich 15 like ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 57450245 57457797 - 116909823 MODEL JAAIVD010000002;XM_032913539;XR_004389101 XP_032769430 proline-rich protein 15-like protein protein-coding 626079140 Blnk B cell linker ENCODES a protein that exhibits enzyme binding (ortholog); lipid binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 4 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 40051967 40118078 - 30032202 116891157 MODEL JAAIVD010000001;XM_032891950 XP_032747841 B-cell linker protein protein-coding 626079161 LOC116895166 mesoderm induction early response protein 3-like 3 63033933 63047236 + 116895166 MODEL JAAIVD010000012 pseudo 626079162 LOC116913054 U6 spliceosomal RNA 11 27465320 27465426 - 116913054 MODEL JAAIVD010000006;XR_004389588 snrna 626079165 Gan gigaxonin INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); Giant Axonal Neuropathy (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 17 36808569 36855965 + 22301074 116886360 MODEL JAAIVD010000011;XM_032887822 XP_032743713 protein-coding 626079180 Eif3e eukaryotic translation initiation factor 3 subunit E ENCODES a protein that exhibits translation initiation factor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of intracellular protein transport (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; translation initiation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Brain Injuries (ortholog); intermittent claudication (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) 1 217839485 217871944 - 22301074;30032202 116911108 MODEL JAAIVD010000025;XM_032914952 XP_032770843 protein-coding 626079197 Tmem109 transmembrane protein 109 INVOLVED IN cellular response to gamma radiation (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of programmed cell death (ortholog) 2 10350302 10360925 - 30032202 116890971 MODEL JAAIVD010000001;XM_032891636 XP_032747527 protein-coding 626079205 LOC116896945 peptidyl-prolyl cis-trans isomerase D-like 3 119673959 119675475 - 116896945 MODEL JAAIVD010000012 pseudo 626079206 LOC116897743 glutaredoxin-1-like 4 104720 105146 - 116897743 MODEL JAAIVD010000003 pseudo 626079207 Armcx1 armadillo repeat containing X-linked 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) X 87018480 87020617 + 22301074;30032202 116888845 MODEL JAAIVD010000014;XM_032890114 XP_032746005 armadillo repeat-containing X-linked protein 1 protein-coding 626079212 LOC116906334 U6 spliceosomal RNA 7 9929213 9929316 + 116906334 MODEL JAAIVD010000026;XR_004388618 snrna 626079215 Lrrc63 leucine rich repeat containing 63 12 49271884 49309180 + 22301074 116913574 MODEL JAAIVD010000007;XM_032917793 XP_032773684 leucine-rich repeat-containing protein 63 protein-coding 626079229 Aicda activation induced cytidine deaminase ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to bacterium (ortholog); isotype switching (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); Alphavirus Infections (ortholog); autoimmune disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 6 24539635 24548743 - 22301074;30032202 116904603 MODEL JAAIVD010000024;XM_032907399 XP_032763290 single-stranded DNA cytosine deaminase protein-coding 626079238 Cfap95 cilia and flagella associated protein 95 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) 2 23634431 23743604 - 30032202 116893744 MODEL JAAIVD010000001;XM_032895453 XP_032751344 C2H9orf135 chromosome 2 C9orf135 homolog;protein C9orf135 homolog protein-coding 626079248 LOC116893542 zinc finger protein 120-like 2 203828917 203834506 + 22301074 116893542 MODEL JAAIVD010000001;XM_032895261 XP_032751152 protein-coding 626079254 LOC116908336 U6 spliceosomal RNA 8 86148728 86148824 + 116908336 MODEL JAAIVD010000027 pseudo 626079255 Pudp pseudouridine 5'-phosphatase ENCODES a protein that exhibits pseudouridine 5'-phosphatase activity (ortholog) 15 35961994 35964222 + 22301074;30032202 116884253 MODEL JAAIVD010000010;XM_032885337 XP_032741228 pseudouridine-5'-phosphatase protein-coding 626079260 Cables2 Cdk5 and Abl enzyme substrate 2 5 157337776 157351298 - 22301074;30032202 116901098 MODEL JAAIVD010000023;XM_032902659 XP_032758550 CDK5 and ABL1 enzyme substrate 2 protein-coding 626079273 LOC116887077 40S ribosomal protein S27 18 2631048 2631391 - 22301074;30032202 116887077 MODEL JAAIVD010000013;XM_032888583 XP_032744474 protein-coding 626079278 Znf365 zinc finger protein 365 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamma-tubulin complex localization (ortholog); mitotic cytokinesis (ortholog); negative regulation of neuron projection development (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); Breast Neoplasms (ortholog); uric acid nephrolithiasis (ortholog); FOUND IN centrosome (ortholog) 18 18914290 18934941 + 30032202 116887155 MODEL JAAIVD010000013;XM_032888702 XP_032744593 protein ZNF365 protein-coding 626079286 LOC116890657 uncharacterized LOC116890657 1 88669 89699 - 116890657 MODEL JAAIVD010000025;XR_004386776 ncrna 626079290 LOC116898008 olfactory receptor 183-like 4 70341575 70342507 - 22301074;30032202 116898008 MODEL JAAIVD010000003;XM_032899404 XP_032755295 protein-coding 626079294 Btbd1 BTB domain containing 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Delayed Emergence from Anesthesia (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 118446985 118483405 + 22301074;30032202 116891896 MODEL JAAIVD010000001;XM_032893311 XP_032749202 BTB/POZ domain-containing protein 1 protein-coding 626079306 LOC116904616 uncharacterized LOC116904616 6 29362795 29372181 - 116904616 MODEL JAAIVD010000024;XR_004388345 ncrna 626079311 LOC116904473 60S ribosomal protein L21-like 6 137822426 137823008 + 116904473 MODEL JAAIVD010000024 pseudo 626079312 LOC116902971 40S ribosomal protein S11-like 6 131143518 131143991 + 22301074;30032202 116902971 MODEL JAAIVD010000024;XM_032905291 XP_032761182 protein-coding 626079315 LOC116913092 ATP synthase subunit g, mitochondrial-like 12 69685828 69686140 + 116913092 MODEL JAAIVD010000007 pseudo 626079316 Ulk3 unc-51 like kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN fibroblast activation (ortholog); negative regulation of smoothened signaling pathway (ortholog); positive regulation of smoothened signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 8 51478852 51485016 + 22301074;30032202 116908091 MODEL JAAIVD010000027;XM_032911374 XP_032767265 serine/threonine-protein kinase ULK3 protein-coding 626079336 Tbc1d10c TBC1 domain family member 10C INVOLVED IN negative regulation of B cell activation (ortholog); negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN filopodium membrane (ortholog); plasma membrane (ortholog) 2 3453132 3460061 + 116890780 MODEL JAAIVD010000001;XM_032891248;XM_032891249 XP_032747139;XP_032747140 carabin protein-coding 626079355 LOC116914976 golgin subfamily A member 4-like 13 21918788 21923562 - 116914976 MODEL JAAIVD010000008 pseudo 626079356 LOC116900509 polypyrimidine tract-binding protein 1-like 5 77116191 77117761 - 116900509 MODEL JAAIVD010000023 pseudo 626079357 LOC116911028 uncharacterized LOC116911028 10 1249994 1254354 + 116911028 MODEL JAAIVD010000005;XR_004389301 ncrna 626079361 LOC116914222 ribosomal oxygenase 2-like 13 68666021 68667364 + 116914222 MODEL JAAIVD010000008 pseudo 626079362 Calml4 calmodulin like 4 ENCODES a protein that exhibits myosin head/neck binding (ortholog); INVOLVED IN brush border assembly (ortholog); FOUND IN microvillus (ortholog) 8 57153140 57164943 + 22301074;30032202 116907471 MODEL JAAIVD010000027;XM_032910456;XM_032910457 XP_032766347;XP_032766348 calmodulin-like protein 4 protein-coding 626079374 Lama2 laminin subunit alpha 2 INVOLVED IN axon guidance (ortholog); positive regulation of synaptic transmission, cholinergic (ortholog); Schwann cell differentiation (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 23 (ortholog); Charcot-Marie-Tooth disease (ortholog); congenital merosin-deficient muscular dystrophy 1A (ortholog); FOUND IN basement membrane (ortholog); dendritic spine (ortholog); neuromuscular junction (ortholog) 2 213156699 213626931 - 22301074;30032202 116893557 MODEL JAAIVD010000001;XM_032895270 XP_032751161 laminin subunit alpha-2 protein-coding 626079443 LOC116895772 60S ribosomal protein L7a-like 3 48090995 48099296 - 116895772 MODEL JAAIVD010000012 pseudo 626079444 LOC116901715 uncharacterized LOC116901715 5 83806763 83820969 + 116901715 MODEL JAAIVD010000023;XR_004388011 ncrna 626079449 Bach2 BACH transcriptional regulator 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN import into nucleus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); primary adaptive immune response involving T cells and B cells (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); celiac disease (ortholog); Crohn's disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 110442274 110780624 - 22301074;30032202 116902387 MODEL JAAIVD010000025;XM_032904907;XM_032904914;XM_032904923;XR_004388066 XP_032760798;XP_032760805;XP_032760814 BTB domain and CNC homolog 2;transcription regulator protein BACH2 protein-coding 626079469 LOC116887981 rab proteins geranylgeranyltransferase component A 1-like X 70139564 70219637 - 22301074;30032202 116887981 MODEL JAAIVD010000014;XM_032889417 XP_032745308 protein-coding 626079484 Gpr15 G protein-coupled receptor 15 ENCODES a protein that exhibits coreceptor activity (ortholog); G protein-coupled receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); angiogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) 4 42685157 42686909 - 22301074;30032202 116897924 MODEL JAAIVD010000003;XM_032899324 XP_032755215 G-protein coupled receptor 15 protein-coding 626079489 Rps3 ribosomal protein S3 ENCODES a protein that exhibits damaged DNA binding (ortholog); DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to nerve growth factor stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Chromosomal Instability (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog) 2 97749616 97754917 - 22301074;2275563;30032202 116891725 MODEL JAAIVD010000001;X51536;XM_032893020 CAA35916;XP_032748911 40S ribosomal protein S3 protein-coding 626079500 Pcdh19 protocadherin 19 ASSOCIATED WITH autism spectrum disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); developmental and epileptic encephalopathy 1 (ortholog) X 85924738 86025377 - 22301074 116888428 MODEL JAAIVD010000014;XM_032889698;XM_032889699;XM_032889700;XM_032889702;XM_032889703 XP_032745589;XP_032745590;XP_032745591;XP_032745593;XP_032745594 protocadherin-19 protein-coding 626079517 Birc7 baculoviral IAP repeat containing 7 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of tumor necrosis factor-mediated signaling pathway (ortholog); ASSOCIATED WITH adrenocortical carcinoma (ortholog); bladder urothelial carcinoma (ortholog); breast carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 158037768 158041918 + 30032202 116900798 MODEL JAAIVD010000023;XM_032902509 XP_032758400 baculoviral IAP repeat-containing protein 7 protein-coding 626079527 Tsga10ip testis specific 10 interacting protein 2 2267790 2281558 + 30032202 116890706 MODEL JAAIVD010000001;XM_032891136;XM_032891137;XM_032891138 XP_032747027;XP_032747028;XP_032747029 testis-specific protein 10-interacting protein protein-coding 626079544 LOC116901144 PEST proteolytic signal-containing nuclear protein-like 1 121076244 121078150 - 116901144 MODEL JAAIVD010000025 pseudo 626079545 Atm ATM serine/threonine kinase ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); DNA-dependent protein kinase activity (ortholog); histone H2AXS139 kinase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); brain development (ortholog); cellular response to gamma radiation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 8 47421106 47523704 - 22301074;30032202 116908140 MODEL JAAIVD010000027;XM_032911433;XM_032911434 XP_032767324;XP_032767325 serine-protein kinase ATM protein-coding 626079616 Naxe NAD(P)HX epimerase ENCODES a protein that exhibits identical protein binding (ortholog); NAD(P)HX epimerase activity (ortholog); INVOLVED IN membrane raft distribution (ortholog); metabolite repair (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH Early-Onset Progressive Encephalopathy with Brain Edema and/or Leukoencephalopathy (ortholog); Early-Onset Progressive Encephalopathy with Brain Edema and/or Leukoencephalopathy 1 (ortholog); genetic disease (ortholog); FOUND IN cell body (ortholog); cilium (ortholog); cytosol (ortholog) 3 65505725 65507798 + 30032202 116896702 MODEL JAAIVD010000012;XM_032898109 XP_032754000 NAD(P)H-hydrate epimerase protein-coding 626079626 Pappa2 pappalysin 2 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); proteolysis (ortholog); response to salt stress (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); SHORT STATURE, DAUBER-ARGENTE TYPE (ortholog); FOUND IN apical plasma membrane (ortholog) 10 38019393 38272493 - 22301074 116911678 MODEL JAAIVD010000005;XM_032915633 XP_032771524 pappalysin-2 protein-coding 626079652 Rrm1 ribonucleotide reductase catalytic subunit M1 ENCODES a protein that exhibits disordered domain specific binding (ortholog); identical protein binding (ortholog); purine nucleotide binding (ortholog); INVOLVED IN 2'-deoxyribonucleotide biosynthetic process (ortholog); cell proliferation in forebrain (ortholog); deoxyribonucleotide biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); Animal Disease Models (ortholog); Autosomal Recessive Progressive External Ophthalmoplegia with Mitochondrial DNA Deletions 6 (ortholog); FOUND IN cell projection (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 2 102336345 102360832 + 22301074;30032202 116891801 MODEL JAAIVD010000001;XM_032893158 XP_032749049 ribonucleoside-diphosphate reductase large subunit protein-coding 626079675 Paqr6 progestin and adipoQ receptor family member 6 3 65182095 65186542 - 22301074;30032202 116896689 MODEL JAAIVD010000012;XM_032898079;XM_032898080;XM_032898081 XP_032753970;XP_032753971;XP_032753972 membrane progestin receptor delta protein-coding 626079692 Gpx6 glutathione peroxidase 6 ASSOCIATED WITH autism spectrum disorder (ortholog); Huntington's disease (ortholog); ovarian carcinoma (ortholog) 14 41499622 41507427 + 22301074;30032202 116883762 MODEL JAAIVD010000009;XM_032885009 XP_032740900 protein-coding 626079701 Dgcr8 DGCR8 microprocessor complex subunit ENCODES a protein that exhibits double-stranded RNA binding (ortholog); heme binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of pre-miRNA processing (ortholog); primary miRNA processing (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alcohol dependence (ortholog); autism spectrum disorder (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 4 3521825 3555238 - 30032202 116898665 MODEL JAAIVD010000003;XM_032899901;XM_032899902;XM_032899903 XP_032755792;XP_032755793;XP_032755794 microprocessor complex subunit DGCR8 protein-coding 626079728 Stip1 stress induced phosphoprotein 1 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); Hsp90 protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; cortisol signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); melanoma (ortholog); FOUND IN nucleus (ortholog); protein folding chaperone complex (ortholog); protein-containing complex (ortholog) 2 757793 776359 + 30032202 116894805 MODEL JAAIVD010000001;XM_032896469 XP_032752360 stress-induced-phosphoprotein 1 protein-coding 626079746 Fam89a family with sequence similarity 89 member A ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog) 17 44263588 44276550 - 116886490 MODEL JAAIVD010000011;XM_032887991 XP_032743882 protein FAM89A protein-coding 626079752 LOC116910770 U6 spliceosomal RNA 9 95325843 95325948 + 116910770 MODEL JAAIVD010000002;XR_004389278 snrna 626079755 LOC116888447 protein FAM156A/FAM156B-like X 11990120 11990532 - 116888447 MODEL JAAIVD010000014 pseudo 626079756 Bub3 BUB3 mitotic checkpoint protein INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); regulation of chromosome segregation (ortholog); ASSOCIATED WITH Premature Aging (ortholog); FOUND IN kinetochore (ortholog); mitotic checkpoint complex (ortholog); nucleoplasm (ortholog) 2 70285596 70293804 - 30032202 116891402 MODEL JAAIVD010000001;XM_032892428 XP_032748319 mitotic checkpoint protein BUB3 protein-coding 626079766 LOC116899548 heterogeneous nuclear ribonucleoprotein A1-like 1 106220948 106221873 + 116899548 MODEL JAAIVD010000025 pseudo 626079767 Adss1 adenylosuccinate synthase 1 ENCODES a protein that exhibits actin filament binding (ortholog); adenylosuccinate synthase activity (ortholog); GTPase activity (ortholog); INVOLVED IN AMP biosynthetic process (ortholog); AMP salvage (ortholog); aspartate metabolic process (ortholog); PARTICIPATES IN Canavan disease pathway; de novo purine biosynthetic pathway; ASSOCIATED WITH Distal Myopathy 5 (ortholog); Experimental Diabetes Mellitus (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog) 7 130214643 130235803 + 22301074;30032202 116905514 MODEL JAAIVD010000026;XM_032908537 XP_032764428 adenylosuccinate synthetase isozyme 1 protein-coding 626079784 LOC116885188 vomeronasal type-2 receptor 116-like 16 2678324 2768278 - 116885188 MODEL JAAIVD010000004 pseudo 626079785 Pdpk1 3-phosphoinositide dependent protein kinase 1 ENCODES a protein that exhibits 3-phosphoinositide-dependent protein kinase activity (ortholog); insulin receptor binding (ortholog); phospholipase activator activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cell migration (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); PARTICIPATES IN adenosine signaling pathway; angiotensin II signaling pathway; FasL mediated signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congestive heart failure (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 9 1370263 1439206 - 22301074;30032202 116910519 MODEL JAAIVD010000002;XM_032914422;XM_032914423 XP_032770313;XP_032770314 3-phosphoinositide-dependent protein kinase 1 protein-coding 626079808 LOC116886640 vomeronasal type-1 receptor 4-like 17 19526403 19527272 - 22301074;30032202 116886640 MODEL JAAIVD010000011;XM_032888143 XP_032744034 protein-coding 626079811 Cxcl9 C-X-C motif chemokine ligand 9 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemotaxis (ortholog); PARTICIPATES IN interleukin-23 signaling pathway; ASSOCIATED WITH allergic disease (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 11 5174692 5179939 - 22301074;30032202 116912280 MODEL JAAIVD010000006;XM_032916276 XP_032772167 C-X-C motif chemokine 9 protein-coding 626079819 Frmd4b FERM domain containing 4B INVOLVED IN establishment of epithelial cell polarity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 6 49564057 49747967 + 22301074;30032202 116903471 MODEL JAAIVD010000024;XM_032906036 XP_032761927 FERM domain-containing protein 4B protein-coding 626079846 Atrn attractin ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN cerebellum development (ortholog); myelination (ortholog); pigmentation (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Liver Cirrhosis (ortholog); Nerve Degeneration (ortholog); FOUND IN extracellular space (ortholog) 5 110634515 110759295 + 22301074;30032202 116901980 MODEL JAAIVD010000023;XM_032904225 XP_032760116 protein-coding 626079878 Marveld2 MARVEL domain containing 2 INVOLVED IN bicellular tight junction assembly (ortholog); cell-cell junction organization (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 49 (ortholog); Deafness (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 3 157981805 158003089 - 30032202 116897093 MODEL JAAIVD010000012;XM_032898730;XM_032898731;XM_032898732 XP_032754621;XP_032754622;XP_032754623 MARVEL domain-containing protein 2 protein-coding 626079895 Gnptab N-acetylglucosamine-1-phosphate transferase subunits alpha and beta ENCODES a protein that exhibits UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); establishment of localization in cell (ortholog); lysosome organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); glycoproteinosis (ortholog); Legg-Calve-Perthes disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 167457067 167524163 + 22301074;30032202 116907784 MODEL JAAIVD010000025;XM_032910929 XP_032766820 N-acetylglucosamine-1-phosphotransferase subunits alpha/beta protein-coding 626079920 Afap1l2 actin filament associated protein 1 like 2 ENCODES a protein that exhibits protein tyrosine kinase activator activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN inflammatory response (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 2 59158672 59248656 + 30032202 116891328 MODEL JAAIVD010000001;XM_032892258 XP_032748149 actin filament-associated protein 1-like 2 protein-coding 626079944 LOC116907159 dnaJ homolog subfamily C member 8-like 8 90616462 90617158 - 116907159 MODEL JAAIVD010000027 pseudo 626079945 LOC116904119 60S ribosomal protein L7-like 6 136045522 136046262 + 116904119 MODEL JAAIVD010000024 pseudo 626079946 LOC116885670 coiled-coil domain-containing protein 90B, mitochondrial-like 16 15415974 15416737 + 116885670 MODEL JAAIVD010000004 pseudo 626079947 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60922866 60922936 + 116897669 MODEL JAAIVD010000012 trna 626079948 LOC116895527 late cornified envelope protein 3D-like 3 120290925 120291221 + 22301074 116895527 MODEL JAAIVD010000012;XM_032896772 XP_032752663 protein-coding 626079951 Abhd17c abhydrolase domain containing 17C, depalmitoylase ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN negative regulation of protein localization to microtubule (ortholog); positive regulation of protein localization to endosome (ortholog); protein depalmitoylation (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) 2 116191271 116232975 + 30032202 116891879 MODEL JAAIVD010000001;XM_032893288 XP_032749179 alpha/beta hydrolase domain-containing protein 17C protein-coding 626079958 LOC116910334 F-actin-capping protein subunit beta 9 62214290 62214953 - 116910334 MODEL JAAIVD010000002 pseudo 626079959 Fabp7 fatty acid binding protein 7 INVOLVED IN cell proliferation in forebrain (ortholog); epithelial cell proliferation (ortholog); neurogenesis (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell periphery (ortholog); cell projection (ortholog); cell-cell junction (ortholog) 18 34460392 34464119 + 30032202 116887332 MODEL JAAIVD010000013;XM_032888925 XP_032744816 fatty acid-binding protein, brain protein-coding 626079967 LOC116906460 small nucleolar RNA SNORA17 7 64099105 64099232 - 116906460 MODEL JAAIVD010000026;XR_004388715 snorna 626079970 LOC116887701 E3 ubiquitin-protein ligase TRIM39 18 9556736 9573195 - 22301074;30032202 116887701 MODEL JAAIVD010000013;XM_032889295;XM_032889297;XM_032889298;XM_032889299 XP_032745186;XP_032745188;XP_032745189;XP_032745190 ribonuclease P protein subunit p21 protein-coding 626079996 LOC116897375 U4 spliceosomal RNA 3 25756080 25756250 - 116897375 MODEL JAAIVD010000012 pseudo 626079997 LOC116897940 olfactory receptor 187-like 4 42963387 42964322 - 22301074;30032202 116897940 MODEL JAAIVD010000003;XM_032899340 XP_032755231 protein-coding 626080001 Lpin1 lipin 1 ENCODES a protein that exhibits histone deacetylase binding (ortholog); peroxisome proliferator activated receptor binding (ortholog); phosphatidate phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); animal organ regeneration (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Acute Recurrent Myoglobinuria, Autosomal Recessive (ortholog); Cachexia (ortholog); end stage renal disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 36339015 36395067 - 30032202 116904891 MODEL JAAIVD010000026;XM_032907493;XM_032907494;XM_032907495 XP_032763384;XP_032763385;XP_032763386 phosphatidate phosphatase LPIN1 protein-coding 626080031 Mcm10 minichromosome maintenance 10 replication initiation factor ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN cell population proliferation (ortholog); DNA damage response (ortholog); DNA replication initiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); immunodeficiency 80 (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 11339765 11362719 - 22301074;30032202 116883933 MODEL JAAIVD010000009;XM_032885183 XP_032741074 protein MCM10 homolog protein-coding 626080053 Son SON DNA and RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); RS domain binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); mitotic cytokinesis (ortholog); mRNA processing (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay (ortholog); Developmental Disabilities (ortholog); FOUND IN nuclear speck (ortholog) 4 52918982 52949926 - 22301074;30032202 116898986 MODEL JAAIVD010000003;XM_032900415;XM_032900416;XM_032900417;XM_032900418;XM_032900419;XR_004387678 XP_032756306;XP_032756307;XP_032756308;XP_032756309;XP_032756310 protein SON protein-coding 626080087 Mppe1 metallophosphoesterase 1 INVOLVED IN GPI anchor biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 15 64057830 64071129 + 22301074;30032202 116884659 MODEL JAAIVD010000010;XM_032885818;XM_032885819;XM_032885820 XP_032741709;XP_032741710;XP_032741711 protein-coding 626080105 LOC116889195 melanoma-associated antigen 10-like X 130054107 130055045 - 30032202 116889195 MODEL JAAIVD010000014;XM_032890353 XP_032746244 protein-coding 626080108 Kdm3a lysine demethylase 3A ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K9 demethylase activity (ortholog); histone H3K9me/H3K9me2 demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); cellular response to leukemia inhibitory factor (ortholog); formaldehyde biosynthetic process (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH cervical cancer (ortholog); colon cancer (ortholog); Ewing sarcoma (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleoplasm (ortholog) 6 74623993 74667991 - 30032202 116903687 MODEL JAAIVD010000024;XM_032906352;XM_032906354;XM_032906355 XP_032762243;XP_032762245;XP_032762246 lysine-specific demethylase 3A protein-coding 626080146 LOC116885070 small nucleolar RNA SNORA40 15 7217605 7217730 - 116885070 MODEL JAAIVD010000010;XR_004385944 snorna 626080149 Rad18 RAD18 E3 ubiquitin protein ligase ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of DNA recombination (ortholog); positive regulation of chromosome segregation (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); male germ cell nucleus (ortholog) 6 33842107 33919312 + 30032202 116903431 MODEL JAAIVD010000024;XM_032905980;XM_032905981;XM_032905982 XP_032761871;XP_032761872;XP_032761873 E3 ubiquitin-protein ligase RAD18 protein-coding 626080171 Aoc3 amine oxidase copper containing 3 ENCODES a protein that exhibits calcium ion binding (ortholog); copper ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN amine metabolic process (ortholog); cell adhesion (ortholog); eating behavior (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; carnosinemia pathway; GABA aminotransferase deficiency pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); aortic aneurysm (ortholog); cerebral amyloid angiopathy (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); early endosome (ortholog) 9 60633507 60640897 + 22301074;30032202 116910570 MODEL JAAIVD010000002;XM_032914489;XM_032914490 XP_032770380;XP_032770381 membrane primary amine oxidase protein-coding 626080184 LOC116894333 mas-related G-protein coupled receptor member B8 2 152042675 152043661 + 22301074;30032202 116894333 MODEL JAAIVD010000001;XM_032896026 XP_032751917 protein-coding 626080187 Nkx6-1 NK6 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cellular response to peptide hormone stimulus (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Spinal Cord Injuries (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN nucleus (ortholog) 11 11847269 11852108 - 22301074;30032202 116912515 MODEL JAAIVD010000006;XM_032916601 XP_032772492 homeobox protein Nkx-6.1 protein-coding 626080192 Acad10 acyl-CoA dehydrogenase family member 10 FOUND IN mitochondrion (ortholog) 16 32172556 32214541 + 22301074 116885506 MODEL JAAIVD010000004;XM_032886798 XP_032742689 protein-coding 626080218 Rerg RAS like estrogen regulated growth inhibitor ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of cell population proliferation (ortholog); response to hormone (ortholog); ASSOCIATED WITH breast cancer (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 6 12338160 12357727 + 22301074 116903729 MODEL JAAIVD010000024;XM_032906410 XP_032762301 ras-related and estrogen-regulated growth inhibitor protein-coding 626080227 Gjb3 gap junction protein beta 3 INVOLVED IN cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); placenta development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 2B (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 30951930 30957921 + 22301074;30032202 116896424 MODEL JAAIVD010000025;XM_032897573 XP_032753464 gap junction beta-3 protein protein-coding 626080233 Setd5 SET domain containing 5 ENCODES a protein that exhibits histone H3 methyltransferase activity (ortholog); histone H3K36 methyltransferase activity (ortholog); histone H3K9 methyltransferase activity (ortholog); INVOLVED IN cognition (ortholog); negative regulation of transcription by RNA polymerase III (ortholog); regulation of chromatin organization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 23 (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 6 33374918 33453538 - 22301074 116903426 MODEL JAAIVD010000024;XM_032905966;XM_032905967;XM_032905968;XM_032905969;XM_032905970;XM_032905971;XM_032905972;XM_032905973 XP_032761857;XP_032761858;XP_032761859;XP_032761860;XP_032761861;XP_032761862;XP_032761863;XP_032761864 histone-lysine N-methyltransferase SETD5 protein-coding 626080275 Otud3 OTU deubiquitinase 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); energy homeostasis (ortholog); negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 19284198 19305563 + 30032202 116893807 MODEL JAAIVD010000025;XM_032895520 XP_032751411 OTU domain-containing protein 3 protein-coding 626080287 Terf1 telomeric repeat binding factor 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); DNA binding, bending (ortholog); double-stranded telomeric DNA binding (ortholog); INVOLVED IN meiotic telomere clustering (ortholog); negative regulation of DNA replication (ortholog); negative regulation of establishment of protein localization to telomere (ortholog); ASSOCIATED WITH breast cancer (ortholog); squamous cell carcinoma (ortholog); stomach cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); fibrillar center (ortholog); nuclear body (ortholog) 1 150210028 150238508 + 22301074 116904039 MODEL JAAIVD010000025;XM_032906890;XM_032906899 XP_032762781;XP_032762790 telomeric repeat-binding factor 1 protein-coding 626080304 Rtn4 reticulon 4 ENCODES a protein that exhibits cadherin binding (ortholog); lipid binding (ortholog); metal ion binding (ortholog); INVOLVED IN axonal fasciculation (ortholog); blastocyst formation (ortholog); cardiac epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Experimental Seizures (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell projection (ortholog) 11 97309946 97356749 + 30032202 116912261 MODEL JAAIVD010000006;XM_032916246;XM_032916248;XM_032916249 XP_032772137;XP_032772139;XP_032772140 reticulon-4 protein-coding 626080323 Speg striated muscle enriched protein kinase INVOLVED IN cardiac muscle cell development (ortholog); circulatory system development (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH autosomal recessive centronuclear myopathy (ortholog); centronuclear myopathy 5 (ortholog); genetic disease (ortholog) 4 148734131 148783892 + 22301074;30032202 116899533 MODEL JAAIVD010000003;XM_032901404 XP_032757295 striated muscle preferentially expressed protein kinase protein-coding 626080370 LOC116914145 small nucleolar RNA SNORA17 12 19847971 19848074 - 116914145 MODEL JAAIVD010000007 pseudo 626080371 Dcph1 damage control phosphatase 1 ENCODES a protein that exhibits enzyme binding (ortholog); protein carboxyl O-methyltransferase activity (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN DNA damage response (ortholog) 2 199209289 199226475 + 30032202 116892892 MODEL JAAIVD010000001;XM_032894801;XM_032894802 XP_032750692;XP_032750693 Armt1 acidic residue methyltransferase 1;damage-control phosphatase ARMT1 protein-coding 626080383 LOC116889058 high mobility group protein HMG-I/HMG-Y-like X 23311275 23313291 - 116889058 MODEL JAAIVD010000014 pseudo 626080384 LOC116887760 U6 spliceosomal RNA 18 7647286 7647391 + 116887760 MODEL JAAIVD010000013;XR_004386260 snrna 626080387 Esm1 endothelial cell specific molecule 1 ENCODES a protein that exhibits hepatocyte growth factor receptor binding (ortholog); integrin binding (ortholog); INVOLVED IN angiogenesis (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog) 3 183539755 183548543 - 22301074 116895649 MODEL JAAIVD010000012;XM_032896854;XM_032896855 XP_032752745;XP_032752746 endothelial cell-specific molecule 1 protein-coding 626080399 LOC116890905 cytochrome P450 2E1 ENCODES a protein that exhibits 4-nitrophenol 2-monooxygenase activity (ortholog); enzyme binding (ortholog); heme binding (ortholog); INVOLVED IN 4-nitrophenol metabolic process (ortholog); lipid hydroxylation (ortholog); long-chain fatty acid metabolic process (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 2 8716039 8726323 - 22301074;30032202 116890905 MODEL JAAIVD010000001;XM_032891525;XR_004386793 XP_032747416 protein-coding 626080415 Muc6 mucin 6, oligomeric mucus/gel-forming ASSOCIATED WITH cholangiocarcinoma (ortholog); cystic fibrosis (ortholog); Gallbladder Neoplasms (ortholog) 2 7834771 7859443 + 22301074;30032202 116891059 MODEL JAAIVD010000001;XM_032891754 XP_032747645 mucin-6 protein-coding 626080452 Clec14a C-type lectin domain containing 14A ENCODES a protein that exhibits extracellular matrix protein binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); lymphangiogenesis (ortholog); sprouting angiogenesis (ortholog); FOUND IN external side of plasma membrane (ortholog) 7 71604916 71608136 - 30032202 116905076 MODEL JAAIVD010000026;XM_032907784 XP_032763675 C-type lectin domain family 14 member A protein-coding 626080457 Ptpdc1 protein tyrosine phosphatase domain containing 1 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 14 67561983 67590847 - 22301074;30032202 116883439 MODEL JAAIVD010000009;XM_032884582;XM_032884583;XM_032884584 XP_032740473;XP_032740474;XP_032740475 protein tyrosine phosphatase domain-containing protein 1 protein-coding 626080479 Omg oligodendrocyte myelin glycoprotein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neuron projection regeneration (ortholog); regulation of collateral sprouting of intact axon in response to injury (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 9 90934235 90936991 + 22301074;30032202 116908509 MODEL JAAIVD010000002;XM_032911683 XP_032767574 oligodendrocyte-myelin glycoprotein protein-coding 626080485 LOC116914311 60S ribosomal protein L10-like 13 37542457 37542884 + 22301074;30032202 116914311 MODEL JAAIVD010000008;XM_032918547 XP_032774438 protein-coding 626080488 Clybl citramalyl-CoA lyase ENCODES a protein that exhibits (S)-citramalyl-CoA lyase activity (ortholog); magnesium ion binding (ortholog); malate synthase activity (ortholog); INVOLVED IN positive regulation of cobalamin metabolic process (ortholog); protein homotrimerization (ortholog); regulation of cobalamin metabolic process (ortholog); FOUND IN mitochondrion (ortholog) 12 2487625 2618708 - 30032202 116913865 MODEL JAAIVD010000007;XM_032918160 XP_032774051 citramalyl-CoA lyase, mitochondrial protein-coding 626080500 Rbp4 retinol binding protein 4 ENCODES a protein that exhibits molecular carrier activity (ortholog); protein-containing complex binding (ortholog); retinol binding (ortholog); INVOLVED IN cardiac muscle tissue development (ortholog); detection of light stimulus involved in visual perception (ortholog); embryonic organ morphogenesis (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute pyelonephritis (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) 2 35635668 35643105 + 22301074;30032202 116893786 MODEL JAAIVD010000001;XM_032895489;XM_032895490;XM_032895491 XP_032751380;XP_032751381;XP_032751382 retinol-binding protein 4 protein-coding 626080517 LOC116902548 small nucleolar RNA SNORA48 5 28493280 28493423 + 116902548 MODEL JAAIVD010000023;XR_004388149 snorna 626080520 Dok7 docking protein 7 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); protein kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN enzyme-linked receptor protein signaling pathway (ortholog); neuromuscular junction development (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 10 (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN mitochondrion (ortholog); neuromuscular junction (ortholog); nucleoplasm (ortholog) 11 69990758 70022885 - 22301074;30032202 116912735 MODEL JAAIVD010000006;XM_032916877 XP_032772768 protein Dok-7 protein-coding 626080534 LOC116887841 uncharacterized LOC116887841 X 39030055 39040672 - 116887841 MODEL JAAIVD010000014 pseudo 626080535 P3h2 prolyl 3-hydroxylase 2 ENCODES a protein that exhibits procollagen-proline 3-dioxygenase activity (ortholog); INVOLVED IN collagen metabolic process (ortholog); negative regulation of cell population proliferation (ortholog); peptidyl-proline hydroxylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); High Myopia with Cataract and Vitreoretinal Degeneration (ortholog); intestinal disease (ortholog); FOUND IN basement membrane (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 10822396 10967656 - 22301074;30032202 116898733 MODEL JAAIVD010000003;XM_032900041 XP_032755932 protein-coding 626080554 Tmem244 transmembrane protein 244 2 212611855 212637958 + 116893556 MODEL JAAIVD010000001;XM_032895269 XP_032751160 protein-coding 626080561 Ccdc198 coiled-coil domain containing 198 INVOLVED IN energy homeostasis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 12 73813469 73837693 + 116913719 MODEL JAAIVD010000007;XM_032918019 XP_032773910 uncharacterized protein CCDC198 protein-coding 626080569 Dnah2 dynein axonemal heavy chain 2 INVOLVED IN cilium movement (ortholog); cilium-dependent cell motility (ortholog); inner dynein arm assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Laterality Defects, Autosomal Dominant (ortholog); primary microcephaly (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); cilium (ortholog) 9 49032559 49157182 - 22301074;30032202 116910305 MODEL JAAIVD010000002;XM_032914170 XP_032770061 dynein heavy chain 2, axonemal protein-coding 626080661 LOC116914166 U6 spliceosomal RNA 12 92169671 92169777 - 116914166 MODEL JAAIVD010000007;XR_004389711 snrna 626080664 Supt6h SPT6 homolog, histone chaperone and transcription elongation factor ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN blastocyst formation (ortholog); regulation of isotype switching (ortholog); regulation of muscle cell differentiation (ortholog) 9 92193729 92231321 + 22301074;30032202 116909949 MODEL JAAIVD010000002;XM_032913722;XM_032913723;XM_032913724 XP_032769613;XP_032769614;XP_032769615 transcription elongation factor SPT6 protein-coding 626080711 Hnf1a HNF1 homeobox A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); apoptotic nuclear changes (ortholog); bile acid and bile salt transport (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH adenoid squamous cell carcinoma (ortholog); breast carcinoma (ortholog); cerebral infarction (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 16 38853632 38879060 + 22301074;30032202 116885327 MODEL JAAIVD010000004;XM_032886592 XP_032742483 hepatocyte nuclear factor 1-alpha protein-coding 626080725 Leng1 leukocyte receptor cluster member 1 2 178250251 178255396 - 116892702 MODEL JAAIVD010000001;XM_032894562 XP_032750453 protein-coding 626080733 LOC116902154 vomeromodulin-like 5 133624929 133636135 + 30032202 116902154 MODEL JAAIVD010000023;XM_032904488 XP_032760379 protein-coding 626080750 LOC116900137 low-density lipoprotein receptor-related protein 1B-like 5 19823463 20147507 + 22301074 116900137 MODEL JAAIVD010000023;XM_032901911 XP_032757802 protein-coding 626080766 LOC116911079 uncharacterized LOC116911079 10 72920300 72926546 + 116911079 MODEL JAAIVD010000005;XR_004389309 ncrna 626080770 LOC116914115 U1 spliceosomal RNA 12 52509620 52509751 - 116914115 MODEL JAAIVD010000007 pseudo 626080771 Gtf2h4 general transcription factor IIH subunit 4 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN core TFIIH complex portion of holo TFIIH complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 18 8885872 8891430 - 22301074;30032202 116887463 MODEL JAAIVD010000013;XM_032889072 XP_032744963 protein-coding 626080789 Nfxl1 nuclear transcription factor, X-box binding like 1 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog) 11 29357650 29400514 - 22301074;30032202 116912129 MODEL JAAIVD010000006;XM_032916038 XP_032771929 NF-X1-type zinc finger protein NFXL1 protein-coding 626080816 LOC116900056 uncharacterized LOC116900056 5 15211456 15211976 - 116900056 MODEL JAAIVD010000023;XM_032901849 XP_032757740 uncharacterized protein LOC116900056 protein-coding 626080820 Pwp1 PWP1 homolog, endonuclein ENCODES a protein that exhibits histone H4K20me3 reader activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of stem cell differentiation (ortholog); positive regulation of transcription of nucleolar large rRNA by RNA polymerase I (ortholog); FOUND IN Golgi apparatus (ortholog); nucleolus (ortholog); nucleus (ortholog) 1 162720223 162735909 - 22301074;30032202 116907324 MODEL JAAIVD010000025;XM_032910273 XP_032766164 periodic tryptophan protein 1 homolog protein-coding 626080838 Ccn5 cellular communication network factor 5 ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); regulation of cell growth (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); nucleus (ortholog) 5 154139689 154151267 - 22301074;30032202 116900791 MODEL JAAIVD010000023;XM_032902502 XP_032758393 WNT1-inducible-signaling pathway protein 2 protein-coding 626080847 LOC116890534 small nucleolar RNA SNORA17 1 96067439 96067570 + 116890534 MODEL JAAIVD010000025;XR_004386715 snorna 626080850 Znf410 zinc finger protein 410 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); oxygen transport (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 7 98421738 98447280 + 30032202 116905264 MODEL JAAIVD010000026;XM_032908117;XM_032908118;XR_004388508 XP_032764008;XP_032764009 protein-coding 626080871 LOC116894723 THO complex subunit 3-like 2 28030376 28032210 + 116894723 MODEL JAAIVD010000001 pseudo 626080872 LOC116896252 zinc finger protein 728-like 3 28321833 28339431 + 30032202 116896252 MODEL JAAIVD010000012;XM_032897323;XM_032897324 XP_032753214;XP_032753215 protein-coding 626080884 Mpi mannose phosphate isomerase ENCODES a protein that exhibits mannose-6-phosphate isomerase activity (ortholog); INVOLVED IN GDP-D-mannose biosynthetic process from fructose-6-phosphate (ortholog); GDP-mannose biosynthetic process (ortholog); mannose to fructose-6-phosphate catabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH carbohydrate metabolic disorder (ortholog); congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ib (ortholog); FOUND IN cytosol (ortholog) 8 51433670 51442135 - 22301074;30032202 116908081 MODEL JAAIVD010000027;XM_032911357;XM_032911358 XP_032767248;XP_032767249 mannose-6-phosphate isomerase protein-coding 626080899 Drc11l dynein regulatory complex subunit 11 like 6 153743301 153754856 - 22301074 116903014 MODEL JAAIVD010000024;XM_032905326 XP_032761217 Iqca1l IQ and AAA domain-containing protein 1-like;IQ motif containing with AAA domain 1 like protein-coding 626080922 LOC116892963 U6 snRNA-associated Sm-like protein LSm5 2 212869182 212869456 + 116892963 MODEL JAAIVD010000001 pseudo 626080923 Chst8 carbohydrate sulfotransferase 8 ENCODES a protein that exhibits dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN hormone biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); sulfur compound metabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); peeling skin syndrome 3 (ortholog) 2 163910991 164016852 + 22301074;30032202 116892277 MODEL JAAIVD010000001;XM_032893866;XM_032893867 XP_032749757;XP_032749758 protein-coding 626080934 Slc7a13 solute carrier family 7 member 13 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); L-cystine transport (ortholog); L-glutamate transmembrane transport (ortholog); FOUND IN apical plasma membrane (ortholog) 1 123918911 123939588 - 22301074;30032202 116889204 MODEL JAAIVD010000025;XM_032890362 XP_032746253 protein-coding 626080942 LOC116910747 U2 spliceosomal RNA 9 60936802 60936992 + 116910747 MODEL JAAIVD010000002;XR_004389260 snrna 626080945 LOC116899718 Y-box-binding protein 1-like 4 180813115 180814295 + 116899718 MODEL JAAIVD010000003 pseudo 626080946 LOC116890067 vomeronasal type-1 receptor 4-like 1 214803744 214804659 - 116890067 MODEL JAAIVD010000025 pseudo 626080947 LOC116897619 U1 spliceosomal RNA 3 158513478 158513638 + 116897619 MODEL JAAIVD010000012;XR_004387600 snrna 626080950 Gga3 golgi associated, gamma adaptin ear containing, ARF binding protein 3 ENCODES a protein that exhibits protein transporter activity (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); negative regulation of amyloid-beta formation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; FOUND IN early endosome (ortholog); Golgi apparatus (ortholog); lysosome (ortholog) 9 68496532 68514818 + 22301074;30032202 116910596 MODEL JAAIVD010000002;XM_032914520 XP_032770411 ADP-ribosylation factor-binding protein GGA3 protein-coding 626080971 Surf2 surfeit 2 FOUND IN nuclear speck (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 9734521 9738422 - 116901254 MODEL JAAIVD010000023;XM_032903010;XM_032903011 XP_032758901;XP_032758902 surfeit locus protein 2 protein-coding 626080985 LOC116887247 odorant-binding protein 1a-like 18 36210818 36216302 - 30032202 116887247 MODEL JAAIVD010000013;XM_032888814 XP_032744705 protein-coding 626080996 LOC116898451 peptidyl-prolyl cis-trans isomerase G-like 4 98094543 98096829 - 116898451 MODEL JAAIVD010000003 pseudo 626080997 Pnck pregnancy up-regulated nonubiquitous CaM kinase ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog) X 129276468 129280278 - 22301074;30032202 116889142 MODEL JAAIVD010000014;XM_032890314 XP_032746205 calcium/calmodulin-dependent protein kinase type 1B protein-coding 626081012 Tsnax translin associated factor X ENCODES a protein that exhibits A2A adenosine receptor binding (ortholog); protein-containing complex binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN siRNA processing (ortholog); FOUND IN cytoplasm (ortholog); endoribonuclease complex (ortholog); Golgi apparatus (ortholog) 17 44524778 44539433 + 22301074;30032202 116886213 MODEL JAAIVD010000011;XM_032887603 XP_032743494 translin-associated protein X protein-coding 626081022 Tmem138 transmembrane protein 138 INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Joubert syndrome (ortholog); Joubert Syndrome 16 (ortholog); FOUND IN cilium (ortholog); microtubule cytoskeleton (ortholog) 2 10051838 10058890 - 30032202 116890962 MODEL JAAIVD010000001;XM_032891623;XM_032891624;XR_004386801 XP_032747514;XP_032747515 protein-coding 626081039 LOC116888527 heat shock factor protein 3-like X 55210908 55263682 - 22301074 116888527 MODEL JAAIVD010000014;XM_032889823 XP_032745714 protein-coding 626081053 LOC116891776 transmembrane O-methyltransferase homolog 2 100194461 100196868 - 30032202 116891776 MODEL JAAIVD010000001;XM_032893117 XP_032749008 protein-coding 626081060 LOC116891300 zinc finger protein 431-like 2 55030464 55040080 + 22301074 116891300 MODEL JAAIVD010000001;XM_032892209 XP_032748100 protein-coding 626081066 Rbfox3 RNA binding fox-1 homolog 3 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); brain infarction (ortholog); generalized epilepsy (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 9 65134292 65572828 + 30032202 116908772 MODEL JAAIVD010000002;XM_032912140;XM_032912141;XM_032912142;XM_032912143;XM_032912144 XP_032768031;XP_032768032;XP_032768033;XP_032768034;XP_032768035 RNA binding protein fox-1 homolog 3 protein-coding 626081091 Kiz kizuna centrosomal protein ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN spindle organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 69 (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 5 126467365 126566334 + 30032202 116902065 MODEL JAAIVD010000023;XM_032904354;XM_032904355 XP_032760245;XP_032760246 centrosomal protein kizuna protein-coding 626081110 Lrrn4 leucine rich repeat neuronal 4 INVOLVED IN long-term memory (ortholog); visual learning (ortholog); FOUND IN plasma membrane (ortholog) 5 112577053 112587558 - 22301074 116900649 MODEL JAAIVD010000023;XM_032902360 XP_032758251 leucine-rich repeat neuronal protein 4 protein-coding 626081119 LOC116903544 uncharacterized protein FLJ45252 homolog 6 59314041 59319342 - 116903544 MODEL JAAIVD010000024;XM_032906157 XP_032762048 protein-coding 626081125 Cpsf4l cleavage and polyadenylation specific factor 4 like 9 75596060 75608484 + 22301074;30032202 116909808 MODEL JAAIVD010000002;XM_032913504;XM_032913505;XM_032913506;XM_032913507 XP_032769395;XP_032769396;XP_032769397;XP_032769398 putative cleavage and polyadenylation specificity factor subunit 4-like protein protein-coding 626081145 LOC116895114 U2 spliceosomal RNA 2 107893417 107893497 + 116895114 MODEL JAAIVD010000001 pseudo 626081146 LOC116890100 olfactory receptor 10H1-like 1 232468969 232469921 + 116890100 MODEL JAAIVD010000025 pseudo 626081147 LOC116910959 cyclin-G-associated kinase-like 10 83599711 83636665 + 30032202 116910959 MODEL JAAIVD010000005;XM_032914686 XP_032770577 protein-coding 626081153 St8sia5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 ENCODES a protein that exhibits alpha-N-acetylneuraminate alpha-2,8-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN glycosphingolipid biosynthetic process (ortholog); FOUND IN Golgi membrane (ortholog) 15 54818111 54879922 - 22301074;30032202 116884430 MODEL JAAIVD010000010;XM_032885518 XP_032741409 alpha-2,8-sialyltransferase 8E protein-coding 626081165 Neil1 nei like DNA glycosylase 1 ENCODES a protein that exhibits DNA N-glycosylase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); lyase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA repair (ortholog); negative regulation of nuclease activity (ortholog); ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Dyslipidemias (ortholog); familial hyperlipidemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 51055224 51061294 - 22301074;30032202 116907642 MODEL JAAIVD010000027;XM_032910705;XM_032910706 XP_032766596;XP_032766597 endonuclease 8-like 1 protein-coding 626081182 LOC116893619 putative 60S ribosomal protein L39-like 5 2 7824272 7824474 - 22301074;30032202 116893619 MODEL JAAIVD010000001;XM_032895332 XP_032751223 protein-coding 626081186 Nopchap1 NOP protein chaperone 1 ENCODES a protein that exhibits box C/D methylation guide snoRNP complex binding (ortholog); INVOLVED IN box C/D snoRNP assembly (ortholog) 1 165071588 165077747 - 22301074;30032202 116907537 MODEL JAAIVD010000025;XM_032910560 XP_032766451 C1H12orf45 chromosome 1 C12orf45 homolog;uncharacterized protein C12orf45 homolog protein-coding 626081194 LOC116906089 60S ribosomal protein L15-like 7 69994503 69995131 + 116906089 MODEL JAAIVD010000026 pseudo 626081195 Tnrc18 trinucleotide repeat containing 18 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); histone H3K9me2/3 reader activity (ortholog); INVOLVED IN protein localization to chromatin (ortholog); transposable element silencing by heterochromatin formation (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); mitochondrion (ortholog) 16 10322625 10419945 + 22301074 116885810 MODEL JAAIVD010000004;XM_032887143;XM_032887144;XM_032887145;XM_032887147;XM_032887148;XM_032887149;XM_032887150;XM_032887151 XP_032743034;XP_032743035;XP_032743036;XP_032743038;XP_032743039;XP_032743040;XP_032743041;XP_032743042 trinucleotide repeat-containing gene 18 protein protein-coding 626081242 Gmppa GDP-mannose pyrophosphorylase A ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN cognition (ortholog); GDP-mannose biosynthetic process (ortholog); GDP-mannose metabolic process (ortholog); ASSOCIATED WITH alacrima, achalasia, and impaired intellectual development syndrome (ortholog); FOUND IN GDP-mannose pyrophosphorylase complex (ortholog) 4 148788052 148795735 + 22301074;30032202 116899534 MODEL JAAIVD010000003;XM_032901406;XM_032901407;XM_032901408;XM_032901409;XM_032901410 XP_032757297;XP_032757298;XP_032757299;XP_032757300;XP_032757301 mannose-1-phosphate guanyltransferase alpha protein-coding 626081271 Lancl1 LanC like glutathione S-transferase 1 ENCODES a protein that exhibits glutathione binding (ortholog); glutathione transferase activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN cellular detoxification (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 4 139819041 139856254 + 22301074;30032202 116899465 MODEL JAAIVD010000003;XM_032901263 XP_032757154 LanC like 1;glutathione S-transferase LANCL1 protein-coding 626081284 Morf4l1 mortality factor 4 like 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); double-strand break repair via homologous recombination (ortholog); fibroblast proliferation (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nuclear speck (ortholog); nucleosome (ortholog) 12 5315871 5338159 - 22301074;30032202 116913349 MODEL JAAIVD010000007;XM_032917502;XM_032917503;XM_032917504 XP_032773393;XP_032773394;XP_032773395 mortality factor 4-like protein 1 protein-coding 626081306 LOC116885082 U6 spliceosomal RNA 15 10663530 10663635 - 116885082 MODEL JAAIVD010000010;XR_004385955 snrna 626081309 LOC116894021 putative olfactory receptor 52P1 2 101953229 101954182 + 22301074 116894021 MODEL JAAIVD010000001;XM_032895737 XP_032751628 protein-coding 626081312 Gper1 G protein-coupled estrogen receptor 1 ENCODES a protein that exhibits chromatin binding (ortholog); estradiol binding (ortholog); G protein-coupled estrogen receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); apoptotic chromosome condensation (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN bisphenol A response pathway; epidermal growth factor/neuregulin signaling pathway; estrogen signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); Dysbiosis (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); cytoplasm (ortholog) 16 13770398 13775068 - 22301074 116885247 MODEL JAAIVD010000004;XM_032886486 XP_032742377 G-protein coupled estrogen receptor 1 protein-coding 626081318 Pdlim4 PDZ and LIM domain 4 ENCODES a protein that exhibits actinin binding (ortholog); alpha-actinin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); excitatory chemical synaptic transmission (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); Neurodevelopmental Disorders (ortholog); osteoporosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoskeleton (ortholog) 9 36516380 36530447 - 30032202 116909994 MODEL JAAIVD010000002;XM_032913777;XM_032913778 XP_032769668;XP_032769669 PDZ and LIM domain protein 4 protein-coding 626081332 C5H20orf173 chromosome 5 C20orf173 homolog 5 135364701 135365741 - 30032202 116902191 MODEL JAAIVD010000023;XM_032904556 XP_032760447 uncharacterized protein C20orf173 homolog protein-coding 626081339 LOC116893756 eukaryotic translation initiation factor 4E-like 2 27744093 27744550 - 116893756 MODEL JAAIVD010000001 pseudo 626081340 Hacd1 3-hydroxyacyl-CoA dehydratase 1 ENCODES a protein that exhibits 3-hydroxyacyl-CoA dehydratase activity (ortholog); enzyme binding (ortholog); hydroxyapatite binding (ortholog); INVOLVED IN cementum mineralization (ortholog); fatty acid elongation (ortholog); myotube differentiation (ortholog); ASSOCIATED WITH Congenital Myopathy 11 (ortholog); congenital structural myopathy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 14 9538005 9562017 + 30032202 116883682 MODEL JAAIVD010000009;XM_032884893 XP_032740784 very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 1 protein-coding 626081350 LOC116902629 small nucleolar RNA SNORA79 5 16734553 16734701 - 116902629 MODEL JAAIVD010000023;XR_004388206 snorna 626081353 LOC116903942 uncharacterized LOC116903942 1 146632704 146636267 + 116903942 MODEL JAAIVD010000025;XR_004388313 ncrna 626081357 Lgals4 galectin 4 ENCODES a protein that exhibits galactoside binding (ortholog); INVOLVED IN antibacterial peptide biosynthetic process (ortholog); defense response to bacterium (ortholog); FOUND IN extracellular space (ortholog) 2 167159644 167167509 - 22301074 116892372 MODEL JAAIVD010000001;XM_032894032 XP_032749923 galectin-4 protein-coding 626081371 Ssh2 slingshot protein phosphatase 2 ENCODES a protein that exhibits actin binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); protein dephosphorylation (ortholog) 9 95890349 96131800 + 22301074;30032202 116908539 MODEL JAAIVD010000002;XM_032911736;XM_032911738 XP_032767627;XP_032767629 protein phosphatase Slingshot homolog 2 protein-coding 626081393 LOC116892780 vomeronasal type-2 receptor 116-like 2 185230701 185248805 - 116892780 MODEL JAAIVD010000001 pseudo 626081394 Inafm2 InaF motif containing 2 5 96900272 96903406 + 116901785 MODEL JAAIVD010000023;XM_032903929 XP_032759820 putative transmembrane protein INAFM2 protein-coding 626081399 LOC116914873 uncharacterized LOC116914873 13 28022998 28028459 - 116914873 MODEL JAAIVD010000008;XR_004389782 ncrna 626081403 Efna1 ephrin A1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell migration (ortholog); central nervous system neuron differentiation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 3 64395861 64403121 + 22301074;30032202 116896651 MODEL JAAIVD010000012;XM_032897982;XM_032897983;XM_032897984 XP_032753873;XP_032753874;XP_032753875 ephrin-A1 protein-coding 626081418 Gprin3 GPRIN family member 3 INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); excitatory chemical synaptic transmission (ortholog); locomotory behavior (ortholog) 6 82471462 82548661 + 30032202 116903723 MODEL JAAIVD010000024;XM_032906404 XP_032762295 G protein-regulated inducer of neurite outgrowth 3 protein-coding 626081424 LOC116907310 S-adenosylmethionine decarboxylase proenzyme-like 8 27219830 27235411 - 116907310 MODEL JAAIVD010000027 pseudo 626081425 LOC116893113 uncharacterized LOC116893113 2 68917220 68918987 + 22301074 116893113 MODEL JAAIVD010000001;XM_032895051 XP_032750942 uncharacterized protein LOC116893113 protein-coding 626081430 LOC116885882 olfactory receptor 7A17-like 16 14865999 14876234 + 116885882 MODEL JAAIVD010000004 pseudo 626081431 LOC116899991 putative UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase LOC100288842 5 810893 813063 - 22301074;30032202 116899991 MODEL JAAIVD010000023;XM_032901801 XP_032757692 protein-coding 626081435 P4hb prolyl 4-hydroxylase subunit beta ENCODES a protein that exhibits actin binding (ortholog); enzyme binding (ortholog); integrin binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to interleukin-7 (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Cole-Carpenter syndrome (ortholog); Cole-Carpenter Syndrome 1 (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 9 63450480 63462697 + 22301074;30032202 116908834 MODEL JAAIVD010000002;XM_032912254;XM_032912255 XP_032768145;XP_032768146 protein disulfide-isomerase protein-coding 626081453 LOC116914330 disintegrin and metalloproteinase domain-containing protein 25-like 13 46713741 46716020 - 22301074;30032202 116914330 MODEL JAAIVD010000008;XM_032918555 XP_032774446 protein-coding 626081456 Cryab crystallin alpha B ENCODES a protein that exhibits amyloid-beta binding (ortholog); cytoskeletal protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process involved in morphogenesis (ortholog); camera-type eye development (ortholog); cellular response to gamma radiation (ortholog); ASSOCIATED WITH adult-onset myofibrillar myopathy 2A (ortholog); cardiomyopathy (ortholog); cataract (ortholog); FOUND IN actin filament bundle (ortholog); axon (ortholog); cardiac myofibril (ortholog) 8 45217637 45221312 + 1765091;22301074;30032202 116907364 MODEL JAAIVD010000027;X60351;X60352;XM_032910313;XM_032910314;XM_032910315 CAA42910;CAA42911;XP_032766204;XP_032766205;XP_032766206 alpha B-crystallin;alpha-crystallin B chain protein-coding 626081469 Ucn urocortin ENCODES a protein that exhibits corticotropin-releasing hormone receptor 1 binding (ortholog); corticotropin-releasing hormone receptor 2 binding (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN activation of protein kinase A activity (ortholog); aerobic respiration (ortholog); associative learning (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH anxiety disorder (ortholog); asthma (ortholog); Burns (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); dendrite (ortholog) 7 22946625 22947679 + 22301074;30032202 116905551 MODEL JAAIVD010000026;XM_032908582 XP_032764473 protein-coding 626081475 LOC116898435 stress-induced-phosphoprotein 1-like 4 92937469 92943681 + 116898435 MODEL JAAIVD010000003;XR_004387650 pseudo 626081479 LOC116895655 serine/arginine-rich splicing factor 3-like 3 184525472 184525980 - 116895655 MODEL JAAIVD010000012 pseudo 626081480 Garin2 golgi associated RAB2 interactor family member 2 INVOLVED IN cell morphogenesis (ortholog); flagellated sperm motility (ortholog); penetration of zona pellucida (ortholog); FOUND IN sperm head (ortholog); sperm midpiece (ortholog) 7 92819424 92846187 + 30032202 116905196 MODEL JAAIVD010000026;XM_032907991 XP_032763882 Fam71d family with sequence similarity 71 member D;protein FAM71D protein-coding 626081490 LOC116888189 tropomyosin alpha-3 chain-like X 120926561 120930436 - 116888189 MODEL JAAIVD010000014 pseudo 626081491 Homez homeobox and leucine zipper encoding ENCODES a protein that exhibits DNA binding (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 12 70133190 70141756 + 22301074;30032202 116913725 MODEL JAAIVD010000007;XM_032918028;XM_032918029 XP_032773919;XP_032773920 homeobox and leucine zipper protein Homez protein-coding 626081503 Lrrc46 leucine rich repeat containing 46 INVOLVED IN maintenance of cell number (ortholog); single fertilization (ortholog); sperm axoneme assembly (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN sperm flagellum (ortholog); sperm midpiece (ortholog) 9 57347328 57352021 + 22301074 116909674 MODEL JAAIVD010000002;XM_032913329 XP_032769220 leucine-rich repeat-containing protein 46 protein-coding 626081515 Taf7 TATA-box binding protein associated factor 7 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone acetyltransferase binding (ortholog); histone H3K27me3 reader activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); estrogen receptor signaling pathway (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); MLL1 complex (ortholog) 15 58415114 58417317 - 22301074;30032202 116884522 MODEL JAAIVD010000010;XM_032885656 XP_032741547 transcription initiation factor TFIID subunit 7 protein-coding 626081521 Gdap2 ganglioside induced differentiation associated protein 2 INVOLVED IN response to retinoic acid (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 27 (ortholog) 3 57872890 57922481 - 116896470 MODEL JAAIVD010000012;XM_032897631 XP_032753522 ganglioside-induced differentiation-associated protein 2 protein-coding 626081539 Ankrd40 ankyrin repeat domain 40 9 51195739 51209018 - 22301074 116910156 MODEL JAAIVD010000002;XM_032914015 XP_032769906 ankyrin repeat domain-containing protein 40 protein-coding 626081548 C2cd4c C2 calcium dependent domain containing 4C FOUND IN cytosol (ortholog) 1 155261727 155264635 + 116905772 MODEL JAAIVD010000025;XM_032908746;XM_032908754 XP_032764637;XP_032764645 C2 calcium-dependent domain-containing protein 4C protein-coding 626081557 LOC116888783 ferritin light chain 1-like X 114234902 114235797 - 116888783 MODEL JAAIVD010000014 pseudo 626081558 LOC116907137 60S ribosomal protein L17-like 8 39794954 39796098 + 116907137 MODEL JAAIVD010000027 pseudo 626081559 LOC116897489 small nucleolar RNA SNORD45 3 7541207 7541284 + 116897489 MODEL JAAIVD010000012;XR_004387510 snorna 626081562 Wfdc10a WAP four-disulfide core domain 10A 5 153302496 153304005 - 22301074;30032202 116900773 MODEL JAAIVD010000023;XM_032902485 XP_032758376 WAP four-disulfide core domain protein 10A protein-coding 626081568 Arsg arylsulfatase G ENCODES a protein that exhibits arylsulfatase activity (ortholog); N-sulfoglucosamine-3-sulfatase activity (ortholog); INVOLVED IN gene expression (ortholog); glial cell differentiation (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); fundus dystrophy (ortholog); mucopolysaccharidosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); lysosome (ortholog) 9 69573983 69688585 - 30032202 116909127 MODEL JAAIVD010000002;XM_032912604;XM_032912605;XM_032912606 XP_032768495;XP_032768496;XP_032768497 protein-coding 626081590 LOC116894541 cytochrome c oxidase subunit 6B2 FOUND IN mitochondrial crista (ortholog); mitochondrion (ortholog) 2 177327392 177328643 - 22301074;30032202 116894541 MODEL JAAIVD010000001;XM_032896248;XM_032896250 XP_032752139;XP_032752141 protein-coding 626081600 Bmf Bcl2 modifying factor INVOLVED IN anoikis (ortholog); cellular response to starvation (ortholog); cellular response to UV (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN acrosomal vesicle (ortholog); actin cytoskeleton (ortholog); cytoplasm (ortholog) 5 96681539 96702154 - 22301074;30032202 116901780 MODEL JAAIVD010000023;XM_032903920;XM_032903921 XP_032759811;XP_032759812 bcl-2-modifying factor protein-coding 626081612 Dynlrb2 dynein light chain roadblock-type 2 PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasmic dynein complex (ortholog) 17 36138725 36149471 + 22301074;30032202 116886284 MODEL JAAIVD010000011;XM_032887710 XP_032743601 protein-coding 626081620 LOC116902593 small nucleolar RNA SNORA17 5 149056073 149056199 + 116902593 MODEL JAAIVD010000023;XR_004388183 snorna 626081623 LOC116895214 ankyrin repeat and SOCS box protein 17-like 3 7603587 7612271 - 116895214 MODEL JAAIVD010000012 pseudo 626081624 Cenpc centromere protein C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chromosome segregation (ortholog); kinetochore assembly (ortholog); mitotic cell cycle (ortholog); ASSOCIATED WITH CREST syndrome (ortholog); liver cirrhosis (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); inner kinetochore (ortholog); kinetochore (ortholog) 11 403002 453528 - 30032202 116912422 MODEL JAAIVD010000006;XM_032916490 XP_032772381 protein-coding 626081647 Pter phosphotriesterase related ENCODES a protein that exhibits N-acetyltaurine hydrolase activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); regulation of appetite (ortholog); taurine metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) 14 30437690 30440277 + 22301074;30032202 116883180 MODEL JAAIVD010000009;XM_032884224 XP_032740115 phosphotriesterase-related protein protein-coding 626081652 Slc2a10 solute carrier family 2 member 10 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); dehydroascorbic acid transmembrane transporter activity (ortholog); INVOLVED IN artery development (ortholog); cell redox homeostasis (ortholog); D-glucose import across plasma membrane (ortholog); ASSOCIATED WITH aortic disease (ortholog); arterial tortuosity syndrome (ortholog); bicuspid aortic valve disease (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 5 152453182 152464588 - 22301074 116902331 MODEL JAAIVD010000023;XM_032904802;XM_032904803;XM_032904805 XP_032760693;XP_032760694;XP_032760696 solute carrier family 2, facilitated glucose transporter member 10 protein-coding 626081668 Enho energy homeostasis associated ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); positive regulation of Notch signaling pathway (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 1 3911620 3913502 + 30032202 116891336 MODEL JAAIVD010000025;XM_032892272 XP_032748163 adropin protein-coding 626081674 Sbds SBDS ribosome maturation factor ENCODES a protein that exhibits microtubule binding (ortholog); ribosome binding (ortholog); rRNA binding (ortholog); INVOLVED IN bone marrow development (ortholog); bone mineralization (ortholog); cytosolic ribosome assembly (ortholog); ASSOCIATED WITH Anodontia of Permanent Dentition (ortholog); aplastic anemia (ortholog); Dwarfism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 16 23727740 23735810 + 22301074 116885543 MODEL JAAIVD010000004;XM_032886837 XP_032742728 ribosome maturation protein SBDS protein-coding 626081683 LOC116897388 U6 spliceosomal RNA 3 140975932 140976038 + 116897388 MODEL JAAIVD010000012;XR_004387432 snrna 626081686 Nptx2 neuronal pentraxin 2 INVOLVED IN associative learning (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH withdrawal disorder (ortholog); FOUND IN extrinsic component of postsynaptic specialization membrane (ortholog); glutamatergic synapse (ortholog); presynapse (ortholog) 16 8620255 8631706 - 116885599 MODEL JAAIVD010000004;XM_032886903 XP_032742794 neuronal pentraxin-2 protein-coding 626081695 LOC116893613 mas-related G-protein coupled receptor member G 2 5942014 5945244 + 22301074;30032202 116893613 MODEL JAAIVD010000001;XM_032895321 XP_032751212 protein-coding 626081701 LOC116886601 non-histone chromosomal protein HMG-17-like 17 10096581 10120261 - 116886601 MODEL JAAIVD010000011 pseudo 626081702 Olig3 oligodendrocyte transcription factor 3 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); spinal cord motor neuron cell fate specification (ortholog) 2 217216333 217218395 - 22301074 116894698 MODEL JAAIVD010000001;XM_032896396 XP_032752287 protein-coding 626081707 LOC116908753 putative sperm motility kinase W 1 159532227 159544854 - 22301074;30032202 116908753 MODEL JAAIVD010000025;XM_032912145 XP_032768036 protein-coding 626081711 LOC116889600 alpha-1B-glycoprotein-like 1 237782483 237794210 - 116889600 MODEL JAAIVD010000025;XM_032890544 XP_032746435 protein-coding 626081718 Pop1 POP1 ribonuclease P/MRP subunit ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); tRNA decay (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH anauxetic dysplasia 1 (ortholog); anauxetic dysplasia 2 (ortholog); genetic disease (ortholog); FOUND IN multimeric ribonuclease P complex (ortholog); nucleolar ribonuclease P complex (ortholog); nucleolus (ortholog) 1 208197655 208224927 + 30032202 116910478 MODEL JAAIVD010000025;XM_032914360;XM_032914366 XP_032770251;XP_032770257 POP1 homolog, ribonuclease P/MRP subunit;ribonucleases P/MRP protein subunit POP1 protein-coding 626081742 LOC116908046 olfactory receptor 867-like 8 15679842 15680762 - 22301074;30032202 116908046 MODEL JAAIVD010000027;XM_032911321 XP_032767212 protein-coding 626081745 LOC116907723 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 8 59454285 59454690 + 116907723 MODEL JAAIVD010000027 pseudo 626081746 LOC116912957 small nucleolar RNA SNORA5 11 75550618 75550754 - 116912957 MODEL JAAIVD010000006;XR_004389524 snorna 626081749 Kctd10 potassium channel tetramerization domain containing 10 ENCODES a protein that exhibits identical protein binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); negative regulation of Notch signaling pathway (ortholog); FOUND IN cytosol (ortholog); MKS complex (ortholog); nucleoplasm (ortholog) 16 39580534 39599145 + 22301074;30032202 116885964 MODEL JAAIVD010000004;XM_032887300 XP_032743191 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 protein-coding 626081760 LOC116907158 peptidyl-prolyl cis-trans isomerase D-like 8 88035967 88037144 + 116907158 MODEL JAAIVD010000027 pseudo 626081761 LOC116903846 GTPase IMAP family member 5 6 92221234 92228895 - 22301074 116903846 MODEL JAAIVD010000024;XM_032906573;XM_032906574;XM_032906575;XM_032906576;XM_032906577 XP_032762464;XP_032762465;XP_032762466;XP_032762467;XP_032762468 protein-coding 626081780 Tbx10 T-box transcription factor 10 2 3637986 3642052 - 22301074;30032202 116890797 MODEL JAAIVD010000001;XM_032891275 XP_032747166 T-box transcription factor TBX10 protein-coding 626081791 Fam43b family with sequence similarity 43 member B 1 19825346 19827761 + 116893864 MODEL JAAIVD010000025;XM_032895587 XP_032751478 protein FAM43B protein-coding 626081796 LOC116891748 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 2 99039624 99040228 - 116891748 MODEL JAAIVD010000001 pseudo 626081797 LOC116894317 ribosome biogenesis protein NSA2 homolog 2 149114710 149115577 + 116894317 MODEL JAAIVD010000001 pseudo 626081798 Enam enamelin ENCODES a protein that exhibits structural constituent of tooth enamel (ortholog); INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1B (ortholog); amelogenesis imperfecta type 1C (ortholog); FOUND IN extracellular matrix (ortholog) 11 1987142 2009667 + 116911932 MODEL JAAIVD010000006;XM_032915824 XP_032771715 protein-coding 626081810 LOC116887348 olfactory receptor 1361-like 18 10449288 10450217 + 22301074;30032202 116887348 MODEL JAAIVD010000013;XM_032888941 XP_032744832 protein-coding 626081813 LOC116914510 protein phosphatase 1 regulatory subunit 26-like 13 2567901 2570881 + 30032202 116914510 MODEL JAAIVD010000008;XM_032918834 XP_032774725 protein-coding 626081817 Adat2 adenosine deaminase tRNA specific 2 2 223610697 223629274 - 22301074;30032202 116894702 MODEL JAAIVD010000001;XM_032896399 XP_032752290 tRNA-specific adenosine deaminase 2 protein-coding 626081827 LOC116898336 uncharacterized LOC116898336 1 39851826 39858410 - 116898336 MODEL JAAIVD010000025;XR_004387648;XR_004387649 ncrna 626081834 Trpm7 transient receptor potential cation channel subfamily M member 7 ENCODES a protein that exhibits actin binding (ortholog); calcium channel activity (ortholog); kinase activity (ortholog); INVOLVED IN actomyosin structure organization (ortholog); calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); ASSOCIATED WITH adenoma (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ortholog); FOUND IN cytoplasmic vesicle (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 5 105629085 105714011 - 22301074;30032202 116901921 MODEL JAAIVD010000023;XM_032904142;XM_032904143;XR_004388031 XP_032760033;XP_032760034 protein-coding 626081883 Macir macrophage immunometabolism regulator INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of epithelial cell migration (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN ciliary transition zone (ortholog); cytoplasm (ortholog) 4 168858456 168878252 + 30032202 116899686 MODEL JAAIVD010000003;XM_032901708;XM_032901709 XP_032757599;XP_032757600 UNC119-binding protein C5orf30 homolog protein-coding 626081893 Secisbp2l SECIS binding protein 2 like ASSOCIATED WITH Lung Neoplasms (ortholog) 5 104070997 104114591 - 30032202 116901909 MODEL JAAIVD010000023;XM_032904122 XP_032760013 selenocysteine insertion sequence-binding protein 2-like protein-coding 626081915 Wdr1 WD repeat domain 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament fragmentation (ortholog); apical junction assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant intellectual developmental disorder 61 (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 11 66654717 66688471 + 30032202 116911956 MODEL JAAIVD010000006;XM_032915877 XP_032771768 WD repeat-containing protein 1 protein-coding 626081934 Yipf7 Yip1 domain family member 7 INVOLVED IN Golgi organization (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 11 26554150 26575366 - 22301074;30032202 116912763 MODEL JAAIVD010000006;XM_032916914 XP_032772805 protein YIPF7 protein-coding 626081944 C1d C1D nuclear receptor corepressor ENCODES a protein that exhibits DNA binding (ortholog); nuclear receptor binding (ortholog); RNA binding (ortholog); INVOLVED IN maturation of 5.8S rRNA (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); transcription repressor complex (ortholog) 11 85718079 85727722 + 30032202 116912354 MODEL JAAIVD010000006;XM_032916408;XM_032916410 XP_032772299;XP_032772301 nuclear nucleic acid-binding protein C1D protein-coding 626081956 LOC116889273 60S ribosomal protein L7-like X 1241837 1242580 + 116889273 MODEL JAAIVD010000014 pseudo 626081957 LOC116893388 partner of Y14 and mago-like 2 169927503 169928375 + 116893388 MODEL JAAIVD010000001 pseudo 626081958 C7H14orf39 chromosome 7 C14orf39 homolog INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); meiotic DNA double-strand break processing involved in reciprocal meiotic recombination (ortholog); ASSOCIATED WITH azoospermia (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 18 (ortholog); FOUND IN central element (ortholog); chromosome (ortholog) 7 87153092 87185637 - 30032202 116906133 MODEL JAAIVD010000026;XM_032909125 XP_032765016 protein SIX6OS1 protein-coding 626081977 LOC116899908 small nucleolar RNA SNORA77 4 3509054 3509178 - 116899908 MODEL JAAIVD010000003;XR_004387880 snorna 626081980 Pigx phosphatidylinositol glycan anchor biosynthesis class X INVOLVED IN GPI anchor biosynthetic process (ortholog); FOUND IN glycosylphosphatidylinositol-mannosyltransferase I complex (ortholog) 4 16912239 16931496 - 22301074;30032202 116897907 MODEL JAAIVD010000003;XM_032899311 XP_032755202 phosphatidylinositol-glycan biosynthesis class X protein protein-coding 626081990 Znf830 zinc finger protein 830 INVOLVED IN blastocyst growth (ortholog); chromosome organization (ortholog); intestinal epithelial structure maintenance (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 9 87748541 87749865 - 22301074;30032202 116909200 MODEL JAAIVD010000002;XM_032912699 XP_032768590 protein-coding 626081995 Gnat1 G protein subunit alpha transducin 1 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN background adaptation (ortholog); cell population proliferation (ortholog); cellular response to electrical stimulus (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH congenital stationary night blindness (ortholog); congenital stationary night blindness 1C (ortholog); congenital stationary night blindness 1G (ortholog); FOUND IN apical plasma membrane (ortholog); heterotrimeric G-protein complex (ortholog); neuronal cell body (ortholog) 8 98995506 99000168 - 22301074;30032202 116906747 MODEL JAAIVD010000027;XM_032909575 XP_032765466 guanine nucleotide-binding protein G(t) subunit alpha-1 protein-coding 626082008 LOC116883357 histone H4 14 41644223 41649006 + 22301074;30032202 116883357 MODEL JAAIVD010000009;XM_032884436 XP_032740327 protein-coding 626082014 Aqp5 aquaporin 5 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); carbon dioxide transport (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN E-cadherin signaling pathway; water transport pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Bothnian type palmoplantar keratoderma (ortholog); brain ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); cytoplasmic vesicle membrane (ortholog) 1 272397977 272401647 + 22301074;30032202 116890251 MODEL JAAIVD010000025;XM_032890977 XP_032746868 aquaporin-5 protein-coding 626082022 Tulp4 TUB like protein 4 FOUND IN cytoplasm (ortholog) 2 192578910 192630680 - 22301074 116892851 MODEL JAAIVD010000001;XM_032894745 XP_032750636 tubby-related protein 4 protein-coding 626082038 LOC116896008 40S ribosomal protein S9-like 3 172989510 172990196 + 116896008 MODEL JAAIVD010000012 pseudo 626082039 Elf4 E74 like ETS transcription factor 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN natural killer cell proliferation (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of interleukin-1 beta production (ortholog); ASSOCIATED WITH autistic disorder (ortholog); AUTOINFLAMMATORY SYNDROME, FAMILIAL, X-LINKED, BEHCET-LIKE 2 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); PML body (ortholog) X 109959399 109998947 + 22301074;30032202 116888729 MODEL JAAIVD010000014;XM_032890019 XP_032745910 ETS-related transcription factor Elf-4 protein-coding 626082052 Rbx1 ring-box 1 ENCODES a protein that exhibits cullin family protein binding (ortholog); molecular adaptor activity (ortholog); NEDD8 ligase activity (ortholog); INVOLVED IN apoptotic process (ortholog); autophagosome assembly (ortholog); base-excision repair, AP site formation via deaminated base removal (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Rubinstein-Taybi syndrome (ortholog); Stevens-Johnson syndrome (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog) 1 251217666 251227565 + 22301074;30032202 116913987 MODEL JAAIVD010000025;XM_032918266 XP_032774157 E3 ubiquitin-protein ligase RBX1 protein-coding 626082061 Epg5 ectopic P-granules 5 autophagy tethering factor INVOLVED IN anatomical structure homeostasis (ortholog); apoptotic process (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); cardiomyopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN lysosome (ortholog); perinuclear region of cytoplasm (ortholog) 15 54119006 54218108 - 30032202 116884989 MODEL JAAIVD010000010;XM_032886209 XP_032742100 ectopic P granules protein 5 homolog;ectopic P-granules autophagy protein 5 homolog protein-coding 626082109 LOC116908777 60S acidic ribosomal protein P0-like 9 8806907 8807439 - 116908777 MODEL JAAIVD010000002 pseudo 626082110 LOC116895761 60S ribosomal protein L13-like 3 43628299 43643498 - 116895761 MODEL JAAIVD010000012 pseudo 626082111 Xrcc5 X-ray repair cross complementing 5 ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent activity, acting on DNA (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular hyperosmotic salinity response (ortholog); cellular response to fatty acid (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH Animal Disease Models (ortholog); basal cell carcinoma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); DNA-dependent protein kinase complex (ortholog) 4 145899531 145986842 + 22301074;30032202 116899483 MODEL JAAIVD010000003;XM_032901317 XP_032757208 X-ray repair cross-complementing protein 5 protein-coding 626082136 Sh3glb2 SH3 domain containing GRB2 like, endophilin B2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 5 5272500 5286944 + 22301074;30032202 116901184 MODEL JAAIVD010000023;XM_032902858;XM_032902859;XM_032902860;XM_032902861;XM_032902862;XM_032902863;XM_032902864;XM_032902865;XM_032902866;XM_032902867;XM_032902868 XP_032758749;XP_032758750;XP_032758751;XP_032758752;XP_032758753;XP_032758754;XP_032758755;XP_032758756;XP_032758757;XP_032758758;XP_032758759 endophilin-B2 protein-coding 626082169 Haao 3-hydroxyanthranilate 3,4-dioxygenase ENCODES a protein that exhibits 3-hydroxyanthranilate 3,4-dioxygenase activity (ortholog); ferrous iron binding (ortholog); iron ion binding (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); dicarboxylic acid metabolic process (ortholog); L-tryptophan catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH atherosclerosis (ortholog); Huntington's disease (ortholog); Hypercholesterolemia (ortholog); FOUND IN cytosol (ortholog); mitochondrial membrane (ortholog) 7 9104695 9117435 + 22301074;30032202 116905541 MODEL JAAIVD010000026;XM_032908578 XP_032764469 protein-coding 626082183 LOC116913080 ATP synthase subunit g, mitochondrial-like 12 19640978 19641316 + 116913080 MODEL JAAIVD010000007 pseudo 626082184 LOC116885368 transcription factor BTF3-like 16 17232807 17233325 + 116885368 MODEL JAAIVD010000004 pseudo 626082185 Ifit2 interferon induced protein with tetratricopeptide repeats 2 INVOLVED IN antiviral innate immune response (ortholog); cellular response to interferon-alpha (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog) 2 34195606 34201670 + 22301074;30032202 116891106 MODEL JAAIVD010000001;XM_032891820 XP_032747711 interferon-induced protein with tetratricopeptide repeats 2 protein-coding 626082191 Pigbos1 PIGB opposite strand 1 INVOLVED IN regulation of endoplasmic reticulum unfolded protein response (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 8 67379024 67379481 + 116908292 MODEL JAAIVD010000027;XM_032911555 XP_032767446 protein PIGBOS1 protein-coding 626082196 LOC116911838 small nucleolar RNA SNORA17 10 73086216 73086342 + 116911838 MODEL JAAIVD010000005;XR_004389372 snorna 626082199 LOC116883884 prolactin-2B1 14 46436409 46443411 + 22301074;30032202 116883884 MODEL JAAIVD010000009;XM_032885151 XP_032741042 protein-coding 626082208 LOC116900486 olfactory receptor 4X2-like 5 71686890 71687819 - 22301074 116900486 MODEL JAAIVD010000023;XM_032902221 XP_032758112 protein-coding 626082211 LOC116893053 aldose reductase-related protein 2-like 2 32967498 32968208 - 116893053 MODEL JAAIVD010000001 pseudo 626082212 LOC116910366 high mobility group protein B3-like 9 76683470 76684905 - 116910366 MODEL JAAIVD010000002 pseudo 626082213 Kcnip3 potassium voltage-gated channel interacting protein 3 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); intracellular protein transport (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; FOUND IN axon (ortholog); axon terminus (ortholog); cytosol (ortholog) 5 106241367 106304971 - 22301074;30032202 116901936 MODEL JAAIVD010000023;XM_032904163;XM_032904164 XP_032760054;XP_032760055 calsenilin protein-coding 626082230 Cbln2 cerebellin 2 precursor INVOLVED IN maintenance of synapse structure (ortholog); positive regulation of synapse assembly (ortholog); spontaneous synaptic transmission (ortholog); ASSOCIATED WITH pulmonary hypertension (ortholog); FOUND IN extracellular space (ortholog); glutamatergic synapse (ortholog); synaptic cleft (ortholog) 15 45898035 45906341 - 22301074 116884686 MODEL JAAIVD010000010;XM_032885868;XM_032885869;XM_032885870 XP_032741759;XP_032741760;XP_032741761 cerebellin-2 protein-coding 626082242 Miga2 mitoguardin 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN bone development (ortholog); mitochondrial fusion (ortholog); FOUND IN mitochondrion (ortholog); plasma membrane (ortholog) 5 5245478 5268283 - 22301074;30032202 116901183 MODEL JAAIVD010000023;XM_032902856;XM_032902857 XP_032758747;XP_032758748 protein-coding 626082265 LOC116898249 signal recognition particle 14 kDa protein-like 4 158139587 158140144 + 22301074;30032202 116898249 MODEL JAAIVD010000003;XM_032899599 XP_032755490 protein-coding 626082270 LOC116891311 uncharacterized LOC116891311 2 9355327 9374536 + 22301074;30032202 116891311 MODEL JAAIVD010000001;XM_032892225 XP_032748116 uncharacterized protein LOC116891311 protein-coding 626082276 LOC116885880 vomeronasal type-2 receptor 116-like 16 14625547 14628419 + 116885880 MODEL JAAIVD010000004 pseudo 626082277 LOC116888129 L-lactate dehydrogenase A chain-like X 105207272 105210832 - 116888129 MODEL JAAIVD010000014 pseudo 626082278 LOC116907162 DNA-(apurinic or apyrimidinic site) lyase 2-like 8 96727861 96729450 + 116907162 MODEL JAAIVD010000027 pseudo 626082279 LOC116888411 melanoma-associated antigen 10-like X 129508530 129509264 - 116888411 MODEL JAAIVD010000014 pseudo 626082280 Slco2b1 solute carrier organic anion transporter family member 2B1 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); cell population proliferation (ortholog); cellular response to iron ion starvation (ortholog); PARTICIPATES IN statin pharmacokinetics pathway; ASSOCIATED WITH liver cancer (ortholog); pancreatic cancer (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); plasma membrane (ortholog) 2 97922918 97960992 - 22301074;30032202 116891727 MODEL JAAIVD010000001;XM_032893022;XM_032893023 XP_032748913;XP_032748914 protein-coding 626082301 LOC116914726 partner of Y14 and mago-like 13 33326228 33326891 + 116914726 MODEL JAAIVD010000008 pseudo 626082302 Sdc2 syndecan 2 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of epithelial cell migration (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH cleft lip (ortholog); cleft palate (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN glutamatergic synapse (ortholog); neuronal cell body (ortholog); plasma membrane (ortholog) 1 206757323 206872196 + 30032202 116910382 MODEL JAAIVD010000025;XM_032914229 XP_032770120 syndecan-2 protein-coding 626082311 Tmem131 transmembrane protein 131 ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN collagen biosynthetic process (ortholog) 4 112997601 113095116 - 30032202 116898475 MODEL JAAIVD010000003;XM_032899724 XP_032755615 protein-coding 626082357 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 90733385 90733456 - 116910789 MODEL JAAIVD010000002 trna 626082358 LOC116904551 T-cell surface glycoprotein YE1/48-like 6 17617630 17644262 + 116904551 MODEL JAAIVD010000024 pseudo 626082359 LOC116883387 uncharacterized LOC116883387 14 7123217 7158734 - 116883387 MODEL JAAIVD010000009;XR_004385755 ncrna 626082364 LOC116894604 vomeronasal type-1 receptor 2-like 2 182116658 182117554 - 22301074;30032202 116894604 MODEL JAAIVD010000001;XM_032896320 XP_032752211 protein-coding 626082367 Polr2l RNA polymerase II, I and III subunit L ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) 2 8012865 8015179 + 22301074;30032202 116890862 MODEL JAAIVD010000001;XM_032891429 XP_032747320 DNA-directed RNA polymerases I, II, and III subunit RPABC5;RNA polymerase II subunit L protein-coding 626082373 LOC116886609 disks large homolog 5-like 17 13006219 13009947 - 116886609 MODEL JAAIVD010000011;XM_032888119 XP_032744010 protein-coding 626082379 LOC116904653 U6 spliceosomal RNA 6 84349753 84349854 + 116904653 MODEL JAAIVD010000024;XR_004388354 snrna 626082382 Noa1 nitric oxide associated 1 ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN mitochondrial ribosome assembly (ortholog); mitochondrion organization (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 34052793 34068749 - 22301074 116912412 MODEL JAAIVD010000006;XM_032916474;XM_032916475 XP_032772365;XP_032772366 nitric oxide-associated protein 1 protein-coding 626082397 LOC116889418 U6 spliceosomal RNA X 63225042 63225148 - 116889418 MODEL JAAIVD010000014;XR_004386383 snrna 626082400 Evi2b ecotropic viral integration site 2B INVOLVED IN myeloid cell development (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of granulocyte differentiation (ortholog) 9 90924166 90925815 + 30032202 116908510 MODEL JAAIVD010000002;XM_032911684 XP_032767575 protein EVI2B protein-coding 626082405 LOC116908589 dynein light chain 1, cytoplasmic-like 9 8680413 8680701 + 22301074;30032202 116908589 MODEL JAAIVD010000002;XM_032911808 XP_032767699 protein-coding 626082409 Adss2 adenylosuccinate synthase 2 ENCODES a protein that exhibits adenylosuccinate synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); AMP biosynthetic process (ortholog); aspartate metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH sarcoma (ortholog); FOUND IN mitochondrion (ortholog) 10 56365709 56395349 - 22301074;30032202 116910991 MODEL JAAIVD010000005;XM_032914705 XP_032770596 adenylosuccinate synthetase isozyme 2 protein-coding 626082426 LOC116892894 zinc finger protein 728-like 2 199625905 199656548 + 30032202 116892894 MODEL JAAIVD010000001;XM_032894803;XM_032894804;XR_004386984 XP_032750694;XP_032750695 protein-coding 626082439 Tbca tubulin folding cofactor A ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); FOUND IN microtubule cytoskeleton (ortholog); nucleolus (ortholog) 3 201523704 201577436 - 22301074;30032202 116897284 MODEL JAAIVD010000012;XM_032899016 XP_032754907 tubulin-specific chaperone A protein-coding 626082447 Chaf1a chromatin assembly factor 1 subunit A ENCODES a protein that exhibits chromo shadow domain binding (ortholog); identical protein binding (ortholog); INVOLVED IN DNA replication-dependent chromatin assembly (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH colon cancer (ortholog); Goldenhar syndrome (ortholog); high grade glioma (ortholog); FOUND IN CAF-1 complex (ortholog); chromatin (ortholog); protein-containing complex (ortholog) 4 87434212 87462017 + 30032202 116899166 MODEL JAAIVD010000003;XM_032900732 XP_032756623 protein-coding 626082465 Adora3 adenosine A3 receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); INVOLVED IN G protein-coupled adenosine receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); histamine secretion by mast cell (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); ischemia (ortholog); FOUND IN neuromuscular junction (ortholog); plasma membrane (ortholog); presynaptic membrane (ortholog) 3 52212669 52216003 - 22301074;30032202 116896413 MODEL JAAIVD010000012;XM_032897557 XP_032753448 adenosine receptor A3 protein-coding 626082471 LOC116883820 prolactin-6A1 14 46495501 46501602 - 22301074;30032202 116883820 MODEL JAAIVD010000009;XM_032885072;XM_032885073;XM_032885074 XP_032740963;XP_032740964;XP_032740965 protein-coding 626082486 Neurod4 neuronal differentiation 4 INVOLVED IN amacrine cell differentiation (ortholog); camera-type eye development (ortholog); cell fate commitment (ortholog) 1 215840150 215852285 + 22301074 116911059 MODEL JAAIVD010000025;XM_032914819 XP_032770710 neurogenic differentiation factor 4 protein-coding 626082492 LOC116893550 uncharacterized LOC116893550 2 207974941 207976248 + 116893550 MODEL JAAIVD010000001 pseudo 626082493 LOC116913890 transformer-2 protein homolog beta-like 12 19150133 19161060 - 116913890 MODEL JAAIVD010000007 pseudo 626082494 LOC116893396 intraflagellar transport protein 81 homolog 2 170432554 170437068 + 116893396 MODEL JAAIVD010000001 pseudo 626082495 Cbfa2t2 CBFA2/RUNX1 partner transcriptional co-repressor 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); intestinal epithelial cell differentiation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 5 133799974 133905707 + 22301074;30032202 116902158 MODEL JAAIVD010000023;XM_032904494;XM_032904495;XM_032904496;XM_032904498;XR_004388047 XP_032760385;XP_032760386;XP_032760387;XP_032760389 protein CBFA2T2 protein-coding 626082521 Tsen54 tRNA splicing endonuclease subunit 54 INVOLVED IN tRNA splicing, via endonucleolytic cleavage and ligation (ortholog); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH amblyopia (ortholog); cerebellar hypoplasia (ortholog); Deglutition Disorders (ortholog) 9 68242540 68250153 - 30032202 116909694 MODEL JAAIVD010000002;XM_032913357 XP_032769248 tRNA-splicing endonuclease subunit Sen54 protein-coding 626082536 Tmem17 transmembrane protein 17 INVOLVED IN cilium assembly (ortholog); non-motile cilium assembly (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); Joubert syndrome (ortholog); Meckel syndrome (ortholog); FOUND IN ciliary membrane (ortholog); ciliary transition zone (ortholog); membrane (ortholog) 11 94335410 94342140 - 30032202 116912691 MODEL JAAIVD010000006;XM_032916826 XP_032772717 protein-coding 626082544 LOC116893652 membrane-spanning 4-domains subfamily A member 6B-like 2 10996239 11008092 + 30032202 116893652 MODEL JAAIVD010000001;XM_032895369 XP_032751260 protein-coding 626082555 LOC116893168 olfactory receptor 51F1-like 2 102963680 102977077 + 22301074 116893168 MODEL JAAIVD010000001;XM_032895079 XP_032750970 protein-coding 626082560 Aldh1b1 aldehyde dehydrogenase 1 family member B1 PARTICIPATES IN disulfiram pharmacodynamics pathway; ASSOCIATED WITH cholestasis (ortholog); Colonic Neoplasms (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 699603 701744 - 30032202 116890744 MODEL JAAIVD010000025;XM_032891203 XP_032747094 aldehyde dehydrogenase X, mitochondrial protein-coding 626082565 Nrbp2 nuclear receptor binding protein 2 INVOLVED IN negative regulation of macroautophagy (ortholog); negative regulation of neuron apoptotic process (ortholog); neuron differentiation (ortholog); FOUND IN cytoplasm (ortholog) 1 248403999 248410148 - 22301074;30032202 116912895 MODEL JAAIVD010000025;XM_032917157;XM_032917164;XR_004389490 XP_032773048;XP_032773055 nuclear receptor-binding protein 2 protein-coding 626082594 LOC116898093 cysteine-rich secretory protein 1 4 95381725 95419175 + 22301074;30032202 116898093 MODEL JAAIVD010000003;XM_032899479 XP_032755370 protein-coding 626082607 LOC116909055 leucine-rich repeat-containing protein 37A-like 9 60894170 60897431 + 116909055 MODEL JAAIVD010000002;XM_032912534 XP_032768425 protein-coding 626082611 LOC116891838 olfactory receptor 5B3-like 2 13119264 13120184 - 116891838 MODEL JAAIVD010000001 pseudo 626082612 LOC116888906 signal peptidase complex subunit 3 X 87535150 87536970 - 22301074;30032202 116888906 MODEL JAAIVD010000014;XM_032890164 XP_032746055 protein-coding 626082617 LOC116895206 serine/threonine-protein phosphatase PGAM5, mitochondrial-like 3 2004078 2004716 + 116895206 MODEL JAAIVD010000012 pseudo 626082618 LOC116885838 bolA-like protein 2 16 453298 481149 - 116885838 MODEL JAAIVD010000004 pseudo 626082619 LOC116910394 olfactory receptor 1A1-like 9 93009441 93010382 - 22301074;30032202 116910394 MODEL JAAIVD010000002;XM_032914233 XP_032770124 protein-coding 626082622 LOC116889384 melanoma-associated antigen B4-like X 49811534 49813520 + 30032202 116889384 MODEL JAAIVD010000014;XM_032890486 XP_032746377 protein-coding 626082629 LOC116907689 olfactory receptor 4D5 8 82878375 82879319 - 22301074 116907689 MODEL JAAIVD010000027;XM_032910795 XP_032766686 protein-coding 626082632 Ptchd4 patched domain containing 4 4 93576675 93767506 - 22301074;30032202 116899237 MODEL JAAIVD010000003;XM_032900839;XM_032900840;XM_032900841;XM_032900842 XP_032756730;XP_032756731;XP_032756732;XP_032756733 patched domain-containing protein 4 protein-coding 626082647 LOC116890467 small nucleolar RNA SNORA15 1 17428645 17428775 - 116890467 MODEL JAAIVD010000025;XR_004386658 snorna 626082650 Slc25a5 solute carrier family 25 member 5 ENCODES a protein that exhibits adenine nucleotide transmembrane transporter activity (ortholog); ATP:ADP antiporter activity (ortholog); oxidative phosphorylation uncoupler activity (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); adenine nucleotide transport (ortholog); B cell differentiation (ortholog); FOUND IN membrane (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) X 102973229 102976364 + 22301074;30032202 116888748 MODEL JAAIVD010000014;XM_032890041 XP_032745932 ADP/ATP translocase 2 protein-coding 626082658 LOC116900667 alpha-enolase-like 5 127215260 127216806 - 116900667 MODEL JAAIVD010000023 pseudo 626082659 LOC116898343 uncharacterized LOC116898343 4 48529611 48552609 + 116898343 MODEL JAAIVD010000003;XM_032899665 XP_032755556 uncharacterized protein LOC116898343 protein-coding 626082669 LOC116885758 Krueppel-like factor 13 16 16152933 16154255 - 116885758 MODEL JAAIVD010000004;XR_004386040 pseudo 626082672 Hcar2 hydroxycarboxylic acid receptor 2 ENCODES a protein that exhibits nicotinic acid receptor activity (ortholog); INVOLVED IN negative regulation of lipid catabolic process (ortholog); neutrophil apoptotic process (ortholog); positive regulation of adiponectin secretion (ortholog); ASSOCIATED WITH Flushing (ortholog); psoriasis (ortholog); schizophrenia (ortholog); FOUND IN cell junction (ortholog); plasma membrane (ortholog) 16 29991354 29993258 + 22301074 116885484 MODEL JAAIVD010000004;XM_032886774 XP_032742665 protein-coding 626082676 Ptpn1 protein tyrosine phosphatase non-receptor type 1 ENCODES a protein that exhibits enzyme binding (ortholog); ephrin receptor binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to angiotensin (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); Calcification of Aortic Valve (ortholog); Carotid Artery Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of endoplasmic reticulum membrane (ortholog); cytosol (ortholog) 5 150028880 150076486 - 22301074 116902305 MODEL JAAIVD010000023;XM_032904749;XM_032904750 XP_032760640;XP_032760641 tyrosine-protein phosphatase non-receptor type 1 protein-coding 626082693 Llgl2 LLGL scribble cell polarity complex component 2 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); establishment or maintenance of polarity of embryonic epithelium (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 68206049 68240580 - 30032202 116909036 MODEL JAAIVD010000002;XM_032912517 XP_032768408 protein-coding 626082723 LOC116899741 U6 spliceosomal RNA 4 2891851 2891957 + 116899741 MODEL JAAIVD010000003;XR_004387757 snrna 626082726 Irgq immunity related GTPase Q ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); substrate localization to autophagosome (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN autophagosome (ortholog); lysosome (ortholog) 2 170178103 170182490 - 22301074 116892486 MODEL JAAIVD010000001;XM_032894215 XP_032750106 immunity-related GTPase family Q protein protein-coding 626082733 LOC116894420 keratin-associated protein 20-2-like 2 158815279 158815437 + 116894420 MODEL JAAIVD010000001;XM_032896125 XP_032752016 protein-coding 626082736 Phyhd1 phytanoyl-CoA dioxygenase domain containing 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog) 5 5350230 5368474 - 116901190 MODEL JAAIVD010000023;XM_032902878;XM_032902879;XM_032902880;XM_032902881 XP_032758769;XP_032758770;XP_032758771;XP_032758772 phytanoyl-CoA dioxygenase domain-containing protein 1 protein-coding 626082761 Def6 DEF6 guanine nucleotide exchange factor INVOLVED IN vesicle-mediated transport to the plasma membrane (ortholog); ASSOCIATED WITH immunodeficiency 87 (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cell-cell junction (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 5629243 5650301 - 30032202 116887043 MODEL JAAIVD010000013;XM_032888535 XP_032744426 differentially expressed in FDCP 6 homolog protein-coding 626082776 Nrn1l neuritin 1 like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN neuron projection extension (ortholog); FOUND IN axon (ortholog); extracellular space (ortholog); membrane (ortholog) 17 25633042 25634677 + 22301074;30032202 116886325 MODEL JAAIVD010000011;XM_032887772;XM_032887773 XP_032743663;XP_032743664 neuritin-like protein protein-coding 626082787 LOC116890563 small nucleolar RNA SNORA17 1 127875708 127875838 + 116890563 MODEL JAAIVD010000025;XR_004386733 snorna 626082790 LOC116896255 zinc finger protein 844-like 3 28548946 28549587 + 116896255 MODEL JAAIVD010000012 pseudo 626082791 Slc26a9 solute carrier family 26 member 9 ENCODES a protein that exhibits ATPase binding (ortholog); bicarbonate transmembrane transporter activity (ortholog); chloride channel activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH intestinal obstruction (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); endoplasmic reticulum membrane (ortholog) 10 4073401 4100035 - 22301074;30032202 116911572 MODEL JAAIVD010000005;XM_032915559 XP_032771450 protein-coding 626082816 LOC116894290 spliceosome-associated protein CWC15 homolog 2 134588300 134588979 - 116894290 MODEL JAAIVD010000001 pseudo 626082817 LOC116915141 small nucleolar RNA SNORA17 13 75902301 75902425 - 116915141 MODEL JAAIVD010000008 pseudo 626082818 LOC116911979 phosphoglycerate kinase 1-like 11 42299533 42300931 + 116911979 MODEL JAAIVD010000006 pseudo 626082819 Pot1 protection of telomeres 1 ENCODES a protein that exhibits 8-hydroxy-2'-deoxyguanosine DNA binding (ortholog); DEAD/H-box RNA helicase binding (ortholog); G-rich single-stranded DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); establishment of protein localization to telomere (ortholog); negative regulation of telomere maintenance via telomerase (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Cerebroretinal Microangiopathy with Calcifications and Cysts 3 (ortholog); cholecystitis (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear telomere cap complex (ortholog); nucleoplasm (ortholog) 6 114102215 114157743 - 22301074;30032202 116904031 MODEL JAAIVD010000024;XM_032906861;XM_032906863;XM_032906864;XM_032906865;XM_032906866 XP_032762752;XP_032762754;XP_032762755;XP_032762756;XP_032762757 protection of telomeres protein 1 protein-coding 626082851 LOC116887714 40S ribosomal protein S15-like 18 9966579 9967023 - 116887714 MODEL JAAIVD010000013 pseudo 626082852 Gnb1 G protein subunit beta 1 ENCODES a protein that exhibits alkylglycerophosphoethanolamine phosphodiesterase activity (ortholog); GTPase activity (ortholog); GTPase binding (ortholog); INVOLVED IN cardiac muscle cell apoptotic process (ortholog); cell population proliferation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway via D1 family of receptors; eicosanoid signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anxiety disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); heterotrimeric G-protein complex (ortholog) 1 5141800 5207953 - 22301074;30032202 116891923 MODEL JAAIVD010000025;XM_032893359;XM_032893367;XM_032893375;XM_032893382;XM_032893388;XM_032893394 XP_032749250;XP_032749258;XP_032749266;XP_032749273;XP_032749279;XP_032749285 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 protein-coding 626082876 Arrb1 arrestin beta 1 ENCODES a protein that exhibits alpha-1A adrenergic receptor binding (ortholog); alpha-1B adrenergic receptor binding (ortholog); angiotensin receptor binding (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); endocytosis (ortholog); follicle-stimulating hormone signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; calcium signaling pathway via the calcium-sensing receptor; corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH Arteriovenous Fistula (ortholog); colitis (ortholog); congestive heart failure (ortholog); FOUND IN basolateral plasma membrane (ortholog); chromatin (ortholog); cytoplasm (ortholog) 2 97846667 97869864 + 22301074;30032202 116891726 MODEL JAAIVD010000001;XM_032893021 XP_032748912 beta-arrestin-1 protein-coding 626082896 Plvap plasmalemma vesicle associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN developmental process (ortholog); MAPK cascade (ortholog); positive regulation of cellular extravasation (ortholog); ASSOCIATED WITH DIARRHEA 10, PROTEIN-LOSING ENTEROPATHY TYPE (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog) 13 13477888 13489893 + 30032202 116914460 MODEL JAAIVD010000008;XM_032918760 XP_032774651 plasmalemma vesicle-associated protein protein-coding 626082906 Nlgn3 neuroligin 3 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); neurexin family protein binding (ortholog); INVOLVED IN adult behavior (ortholog); axon extension (ortholog); circadian sleep/wake cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); FOUND IN cell surface (ortholog); dendrite (ortholog); endocytic vesicle (ortholog) X 59216898 59244397 - 22301074;30032202 116888406 MODEL JAAIVD010000014;XM_032889678 XP_032745569 neuroligin-3 protein-coding 626082919 Lig4 DNA ligase 4 ENCODES a protein that exhibits AMP binding (ortholog); ATP binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to ionizing radiation (ortholog); cellular response to lithium ion (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH colorectal cancer (ortholog); DNA ligase IV deficiency (ortholog); genetic disease (ortholog); FOUND IN condensed chromosome (ortholog); DNA ligase IV complex (ortholog); DNA-dependent protein kinase-DNA ligase 4 complex (ortholog) 13 73858349 73863856 + 22301074;30032202 116914459 MODEL JAAIVD010000008;XM_032918759 XP_032774650 protein-coding 626082924 Trnaa-cgc transfer RNA alanine (anticodon CGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 35078205 35078276 + 116902671 MODEL JAAIVD010000023 trna 626082925 Jcad junctional cadherin 5 associated INVOLVED IN positive regulation of blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); positive regulation of cell migration involved in sprouting angiogenesis (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 14 30988757 31016149 + 30032202 116883442 MODEL JAAIVD010000009;XM_032884586;XM_032884587 XP_032740477;XP_032740478 junctional protein associated with coronary artery disease protein-coding 626082937 LOC116901422 translation initiation factor IF-2-like 5 35023160 35025022 - 116901422 MODEL JAAIVD010000023;XM_032903312 XP_032759203 protein-coding 626082943 Llcfc1 LLLL and CFNLAS motif containing 1 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog) 6 98932969 98933849 - 22301074;30032202 116902966 MODEL JAAIVD010000024;XM_032905287 XP_032761178 LLLL and CFNLAS motif-containing protein 1 protein-coding 626082947 Tuba1c tubulin alpha 1c ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 24 (ortholog); osteoporosis (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); membrane raft (ortholog) 1 271861017 271869043 + 22301074;30032202 116884942 MODEL JAAIVD010000025;XM_032886153 XP_032742044 tubulin alpha-1C chain protein-coding 626082955 Ikzf1 IKAROS family zinc finger 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); B cell differentiation (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 80610332 80694075 + 30032202 116912594 MODEL JAAIVD010000006;XM_032916714;XM_032916715;XM_032916716 XP_032772605;XP_032772606;XP_032772607 DNA-binding protein Ikaros protein-coding 626082971 Catsperq catsper channel auxiliary subunit theta ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); FOUND IN CatSper complex (ortholog); sperm principal piece (ortholog) 1 248868573 248871374 - 116889970 MODEL JAAIVD010000025;XM_032890767 XP_032746658 Tmem249 transmembrane protein 249 protein-coding 626082980 Tstd1 thiosulfate sulfurtransferase like domain containing 1 ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 10 50589068 50590494 + 30032202 116911136 MODEL JAAIVD010000005;XM_032914985;XM_032914986;XM_032914987 XP_032770876;XP_032770877;XP_032770878 thiosulfate:glutathione sulfurtransferase protein-coding 626082994 Slc16a11 solute carrier family 16 member 11 ENCODES a protein that exhibits pyruvate transmembrane transporter activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 9 49815100 49818945 + 22301074;30032202 116909003 MODEL JAAIVD010000002;XM_032912471;XM_032912472;XM_032912473;XM_032912474 XP_032768362;XP_032768363;XP_032768364;XP_032768365 monocarboxylate transporter 11 protein-coding 626083016 Insm2 INSM transcriptional repressor 2 7 68840950 68842531 + 30032202 116905711 MODEL JAAIVD010000026;XM_032908683 XP_032764574 insulinoma-associated protein 2 protein-coding 626083020 Tango2 transport and golgi organization 2 homolog ASSOCIATED WITH autistic disorder (ortholog); Cardiac Arrhythmias (ortholog); epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 4 3567415 3612397 - 30032202 116898669 MODEL JAAIVD010000003;XM_032899906;XM_032899907;XM_032899908;XM_032899910;XM_032899911;XM_032899912;XM_032899913;XM_032899914;XM_032899915;XM_032899916;XM_032899917 XP_032755797;XP_032755798;XP_032755799;XP_032755801;XP_032755802;XP_032755803;XP_032755804;XP_032755805;XP_032755806;XP_032755807;XP_032755808 transport and Golgi organization protein 2 homolog protein-coding 626083063 LOC116884637 interferon-inducible GTPase 1-like 15 71551993 71553669 - 22301074;30032202 116884637 MODEL JAAIVD010000010;XM_032885777 XP_032741668 protein-coding 626083067 LOC116883637 cathepsin M-like 14 77223867 77231926 - 30032202 116883637 MODEL JAAIVD010000009;XM_032884825 XP_032740716 protein-coding 626083079 LOC116903038 tubulin gamma-1 chain-like 6 159405504 159406818 + 116903038 MODEL JAAIVD010000024 pseudo 626083080 LOC116904744 small nucleolar RNA SNORA17 6 82805886 82806014 - 116904744 MODEL JAAIVD010000024;XR_004388430 snorna 626083083 Rmnd5b required for meiotic nuclear division 5 homolog B ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 9 34212460 34223551 - 22301074;30032202 116909308 MODEL JAAIVD010000002;XM_032912847;XM_032912849 XP_032768738;XP_032768740 E3 ubiquitin-protein transferase RMND5B protein-coding 626083101 LOC116890517 small nucleolar RNA SNORA17 1 109363713 109363846 + 116890517 MODEL JAAIVD010000025;XR_004386699 snorna 626083104 LOC116884311 serine/arginine-rich splicing factor 3-like 15 10646858 10647343 - 116884311 MODEL JAAIVD010000010 pseudo 626083105 LOC116901215 mitochondrial mRNA pseudouridine synthase Trub2-like 5 6949679 6956041 + 22301074;30032202 116901215 MODEL JAAIVD010000023;XM_032902932 XP_032758823 protein-coding 626083114 Palm3 paralemmin 3 INVOLVED IN negative regulation of cytokine-mediated signaling pathway (ortholog); response to lipopolysaccharide (ortholog); Toll signaling pathway (ortholog) 17 16253290 16257290 - 30032202 116886511 MODEL JAAIVD010000011;XM_032888019 XP_032743910 paralemmin-3 protein-coding 626083123 Lipn lipase family member N ASSOCIATED WITH autosomal recessive congenital ichthyosis 8 (ortholog) 2 33680072 33697267 + 22301074 116893058 MODEL JAAIVD010000001;XM_032895019 XP_032750910 lipase member N protein-coding 626083135 Pth2 parathyroid hormone 2 2 154360226 154360868 - 22301074;30032202 116894345 MODEL JAAIVD010000001;XM_032896043 XP_032751934 tuberoinfundibular peptide of 39 residues protein-coding 626083141 LOC116888346 selection and upkeep of intraepithelial T-cells protein 10-like 1 87080926 87110839 - 30032202 116888346 MODEL JAAIVD010000025;XM_032889618 XP_032745509 protein-coding 626083153 LOC116893493 selenocysteine lyase-like 2 182597682 182598805 - 116893493 MODEL JAAIVD010000001 pseudo 626083154 LOC116893873 PWWP domain-containing DNA repair factor 3B-like 2 63145951 63148295 + 116893873 MODEL JAAIVD010000001;XM_032895596 XP_032751487 protein-coding 626083159 LOC116893469 sperm motility kinase X-like 2 180214001 180214940 + 116893469 MODEL JAAIVD010000001 pseudo 626083160 LOC116901712 reticulocalbin-1 5 83313490 83320627 - 22301074;30032202 116901712 MODEL JAAIVD010000023;XM_032903844 XP_032759735 protein-coding 626083168 LOC116910778 U6 spliceosomal RNA 9 83446850 83446956 + 116910778 MODEL JAAIVD010000002;XR_004389284 snrna 626083171 LOC116906198 Ig heavy chain V region MC101-like 7 121039209 121039681 + 116906198 MODEL JAAIVD010000026 pseudo 626083172 LOC116914763 uncharacterized LOC116914763 13 71270584 71272360 - 116914763 MODEL JAAIVD010000008 pseudo 626083173 LOC116885045 small nucleolar RNA SNORA17 15 17390569 17390700 - 116885045 MODEL JAAIVD010000010;XR_004385931 snorna 626083176 Recql5 RecQ like helicase 5 ENCODES a protein that exhibits DNA helicase activity (ortholog); helicase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to camptothecin (ortholog); cellular response to xenobiotic stimulus (ortholog); chromosome separation (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 68129190 68167965 + 22301074;30032202 116909815 MODEL JAAIVD010000002;XM_032913518 XP_032769409 ATP-dependent DNA helicase Q5 protein-coding 626083199 Foxg1 forkhead box G1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon midline choice point recognition (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); central nervous system neuron development (ortholog); ASSOCIATED WITH acrocallosal syndrome (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) 7 64222170 64225710 - 22301074;30032202 116905026 MODEL JAAIVD010000026;XM_032907705 XP_032763596 forkhead box protein G1 protein-coding 626083205 LOC116913278 polypyrimidine tract-binding protein 1-like 12 86587339 86587998 + 116913278 MODEL JAAIVD010000007 pseudo 626083206 Gpr119 G protein-coupled receptor 119 ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); INVOLVED IN insulin secretion (ortholog); FOUND IN receptor complex (ortholog) X 109629040 109630321 + 22301074;30032202 116888371 MODEL JAAIVD010000014;XM_032889647 XP_032745538 glucose-dependent insulinotropic receptor protein-coding 626083211 Myoz1 myozenin 1 ENCODES a protein that exhibits actinin binding (ortholog); FATZ binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN negative regulation of calcineurin-NFAT signaling cascade (ortholog); negative regulation of skeletal muscle tissue regeneration (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN actin cytoskeleton (ortholog) 12 90454616 90462040 - 22301074;30032202 116913586 MODEL JAAIVD010000007;XM_032917814;XM_032917815 XP_032773705;XP_032773706 myozenin-1 protein-coding 626083225 Sfmbt2 Scm like with four mbt domains 2 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); nuclear body (ortholog) 14 16469798 16664093 + 22301074 116883655 MODEL JAAIVD010000009;XM_032884847 XP_032740738 scm-like with four MBT domains protein 2 protein-coding 626083252 LOC116900781 antileukoproteinase-like 5 153636473 153637892 + 22301074;30032202 116900781 MODEL JAAIVD010000023;XM_032902491 XP_032758382 protein-coding 626083257 LOC116895512 putative MAGE domain-containing protein MAGEA13P 3 114565011 114565952 - 30032202 116895512 MODEL JAAIVD010000012;XM_032896760 XP_032752651 protein-coding 626083260 Mrps12 mitochondrial ribosomal protein S12 FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 2 167265735 167268846 + 22301074;30032202 116892381 MODEL JAAIVD010000001;XM_032894043;XM_032894044;XM_032894045 XP_032749934;XP_032749935;XP_032749936 28S ribosomal protein S12, mitochondrial protein-coding 626083273 LOC116895355 heat shock cognate 71 kDa protein-like 3 46709709 46711971 - 116895355 MODEL JAAIVD010000012 pseudo 626083274 Smg6 SMG6 nonsense mediated mRNA decay factor ENCODES a protein that exhibits DNA polymerase binding (ortholog); ribonucleoprotein complex binding (ortholog); RNA binding (ortholog); INVOLVED IN negative regulation of telomere capping (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); regulation of telomere maintenance (ortholog); ASSOCIATED WITH corpus callosum agenesis-abnormal genitalia syndrome (ortholog); FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 93659865 93887183 + 22301074;30032202 116910542 MODEL JAAIVD010000002;XM_032914449 XP_032770340 telomerase-binding protein EST1A protein-coding 626083297 LOC116891373 X-linked lymphocyte-regulated protein 3A-like 2 63080346 63088015 - 30032202 116891373 MODEL JAAIVD010000001;XM_032892373;XM_032892374 XP_032748264;XP_032748265 protein-coding 626083308 LOC116885995 5S ribosomal RNA 16 6714884 6715002 + 116885995 MODEL JAAIVD010000004 pseudo 626083309 Hint1 histidine triad nucleotide binding protein 1 ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); deSUMOylase activity (ortholog); hydrolase activity (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of calcium-mediated signaling (ortholog); protein desumoylation (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); Gamstorp-Wohlfart syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone deacetylase complex (ortholog) 9 37302305 37306058 + 30032202 116909811 MODEL JAAIVD010000002;XM_032913510 XP_032769401 histidine triad nucleotide-binding protein 1 protein-coding 626083316 LOC116908992 putative olfactory receptor 3A4 9 92937660 92938595 - 22301074;30032202 116908992 MODEL JAAIVD010000002;XM_032912461 XP_032768352 protein-coding 626083319 LOC116912434 lysophosphatidylcholine acyltransferase 2B 11 17201615 17205029 + 22301074;30032202 116912434 MODEL JAAIVD010000006;XM_032916502 XP_032772393 protein-coding 626083325 Edc3 enhancer of mRNA decapping 3 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 50 (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog) 8 51591836 51634377 + 22301074;30032202 116908077 MODEL JAAIVD010000027;XM_032911353 XP_032767244 enhancer of mRNA-decapping protein 3 protein-coding 626083336 Chmp4b charged multivesicular body protein 4B ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); exit from mitosis (ortholog); ASSOCIATED WITH cataract 31 multiple types (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 5 134031905 134072468 + 30032202 116902165 MODEL JAAIVD010000023;XM_032904507 XP_032760398 protein-coding 626083345 Eif4enif1 eukaryotic translation initiation factor 4E nuclear import factor 1 ENCODES a protein that exhibits kinase binding (ortholog); mRNA binding (ortholog); nuclear export signal receptor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by inhibition of translation (ortholog); mRNA stabilization (ortholog); negative regulation of deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 11 72180647 72220562 + 30032202 116912181 MODEL JAAIVD010000006;XM_032916114 XP_032772005 eukaryotic translation initiation factor 4E transporter protein-coding 626083368 LOC116907255 uncharacterized LOC116907255 8 92537289 92547475 + 116907255 MODEL JAAIVD010000027;XR_004388815 ncrna 626083373 Stt3a STT3 oligosaccharyltransferase complex catalytic subunit A ENCODES a protein that exhibits dolichyl-diphosphooligosaccharide-protein glycotransferase activity (ortholog); INVOLVED IN obsolete co-translational protein modification (ortholog); protein N-linked glycosylation (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Iw (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN membrane (ortholog); oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog) 8 32911495 32942476 - 22301074;30032202 116906673 MODEL JAAIVD010000027;XM_032909460 XP_032765351 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A protein-coding 626083394 Aff4 ALF transcription elongation factor 4 INVOLVED IN response to endoplasmic reticulum stress (ortholog); spermatid development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); autism spectrum disorder (ortholog); bone development disease (ortholog); FOUND IN euchromatin (ortholog); fibrillar center (ortholog); nuclear body (ortholog) 9 35832796 35912743 + 22301074;30032202 116909598 MODEL JAAIVD010000002;XM_032913220 XP_032769111 AF4/FMR2 family member 4 protein-coding 626083419 LOC116894105 olfactory receptor 52D1-like 2 103552212 103553165 + 22301074 116894105 MODEL JAAIVD010000001;XM_032895824 XP_032751715 protein-coding 626083422 Mphosph9 M-phase phosphoprotein 9 INVOLVED IN negative regulation of cilium assembly (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); Golgi apparatus (ortholog) 16 29544898 29609874 + 30032202 116885228 MODEL JAAIVD010000004;XM_032886464;XM_032886465;XM_032886466;XM_032886467 XP_032742355;XP_032742356;XP_032742357;XP_032742358 protein-coding 626083463 LOC116897573 U1 spliceosomal RNA 3 14792680 14792831 + 116897573 MODEL JAAIVD010000012 pseudo 626083464 LOC116908359 small nucleolar RNA SNORA8 8 11109871 11110007 + 116908359 MODEL JAAIVD010000027;XR_004388909 snorna 626083467 Acoxl acyl-CoA oxidase like ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog) 5 106618482 106916464 + 22301074;30032202 116900622 MODEL JAAIVD010000023;XM_032902341 XP_032758232 acyl-coenzyme A oxidase-like protein protein-coding 626083491 Lonrf2 LON peptidase N-terminal domain and ring finger 2 ENCODES a protein that exhibits misfolded protein binding (ortholog); ribonucleoprotein complex binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN motor behavior (ortholog); negative regulation of neuron apoptotic process (ortholog); neuromuscular process (ortholog) 4 115006049 115042749 - 22301074 116899312 MODEL JAAIVD010000003;XM_032900976 XP_032756867 LON peptidase N-terminal domain and RING finger protein 2 protein-coding 626083507 LOC116909084 COP9 signalosome complex subunit 9-like 9 91023504 91023678 + 116909084 MODEL JAAIVD010000002 pseudo 626083508 Nuggc nuclear GTPase, germinal center associated ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); negative regulation of apoptotic process (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 12 58792446 58827680 - 30032202 116913180 MODEL JAAIVD010000007;XM_032917378 XP_032773269 nuclear GTPase SLIP-GC protein-coding 626083528 LOC116894926 small nucleolar RNA SNORD30 2 9215544 9215612 - 116894926 MODEL JAAIVD010000001;XR_004387125 snorna 626083531 Fat1 FAT atypical cadherin 1 INVOLVED IN actin filament organization (ortholog); camera-type eye development (ortholog); camera-type eye morphogenesis (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); autosomal dominant cerebellar ataxia (ortholog); colorectal cancer (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell-cell junction (ortholog) 13 42796994 42912577 - 22301074 116914807 MODEL JAAIVD010000008;XM_032919261 XP_032775152 protocadherin Fat 1 protein-coding 626083564 Rnase4 ribonuclease A family member 4 ENCODES a protein that exhibits RNA nuclease activity (ortholog); INVOLVED IN antibacterial humoral response (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 12 72201370 72218749 - 22301074;30032202 116913556 MODEL JAAIVD010000007;XM_032917763;XM_032917764 XP_032773654;XP_032773655 ribonuclease 4 protein-coding 626083575 LOC116893051 anamorsin-like 2 32485434 32491701 - 116893051 MODEL JAAIVD010000001 pseudo 626083576 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 15 9788383 9788455 + 116885120 MODEL JAAIVD010000010 trna 626083577 Vps18 VPS18 core subunit of CORVET and HOPS complexes ENCODES a protein that exhibits actin binding (ortholog); syntaxin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN endosome organization (ortholog); endosome to lysosome transport (ortholog); lysosome organization (ortholog); FOUND IN actin filament (ortholog); AP-3 adaptor complex (ortholog); CORVET complex (ortholog) 5 97466825 97478006 + 22301074;30032202 116901806 MODEL JAAIVD010000023;XM_032903965 XP_032759856 vacuolar protein sorting-associated protein 18 homolog protein-coding 626083586 Iqcg IQ motif containing G ENCODES a protein that exhibits calmodulin binding (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN sperm axoneme assembly (ortholog); spermatid development (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 17820496 17857424 - 22301074;30032202 116898787 MODEL JAAIVD010000003;XM_032900129 XP_032756020 dynein regulatory complex protein 9 protein-coding 626083601 LOC116884949 transcription initiation factor TFIID subunit 4B-like 15 28897775 28996516 - 22301074;30032202 116884949 MODEL JAAIVD010000010;XM_032886154 XP_032742045 protein-coding 626083613 Ifi44 interferon induced protein 44 INVOLVED IN cellular response to virus (ortholog); response to bacterium (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Human Influenza (ortholog); multisystem inflammatory syndrome in children (ortholog) 3 85110954 85128208 - 116896786 MODEL JAAIVD010000012;XM_032898252;XM_032898253;XM_032898254;XM_032898255 XP_032754143;XP_032754144;XP_032754145;XP_032754146 interferon-induced protein 44 protein-coding 626083633 Kiaa0586 KIAA0586 ortholog INVOLVED IN cilium assembly (ortholog); regulation of establishment of protein localization (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); cerebellar hypoplasia (ortholog); cone-rod dystrophy (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog) 7 84770562 84865962 + 22301074;30032202 116905141 MODEL JAAIVD010000026;XM_032907905;XM_032907906 XP_032763796;XP_032763797 protein TALPID3 protein-coding 626083668 LOC116906505 U2 spliceosomal RNA 7 75122889 75122981 + 116906505 MODEL JAAIVD010000026 pseudo 626083669 Ubqln1 ubiquilin 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN aggrephagy (ortholog); autophagosome assembly (ortholog); autophagosome maturation (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN aggresome (ortholog); autophagosome (ortholog); cytoplasm (ortholog) 14 79910172 79949428 + 30032202 116915215 MODEL JAAIVD010000009;XM_032919594;XM_032919595;XM_032919596 XP_032775485;XP_032775486;XP_032775487 ubiquilin-1 protein-coding 626083688 Nkx3-2 NK3 homeobox 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ development (ortholog); animal organ formation (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); genetic disease (ortholog); Spondylo-Megaepiphyseal-Metaphyseal Dysplasia (ortholog) 11 63727497 63729720 + 22301074;30032202 116912860 MODEL JAAIVD010000006;XM_032917074 XP_032772965 homeobox protein Nkx-3.2 protein-coding 626083692 Ccdc148 coiled-coil domain containing 148 ASSOCIATED WITH amenorrhea (ortholog) 5 36587123 36770930 - 116901431 MODEL JAAIVD010000023;XM_032903324 XP_032759215 coiled-coil domain-containing protein 148 protein-coding 626083710 Pkib cAMP-dependent protein kinase inhibitor beta ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); INVOLVED IN positive regulation of telomere maintenance (ortholog) 18 34362744 34405357 + 22301074;30032202 116887362 MODEL JAAIVD010000013;XM_032888956;XM_032888957 XP_032744847;XP_032744848 protein-coding 626083720 Mrpl35 mitochondrial ribosomal protein L35 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 6 74849987 74857639 - 22301074;30032202 116903689 MODEL JAAIVD010000024;XM_032906358;XM_032906359;XR_004388291 XP_032762249;XP_032762250 39S ribosomal protein L35, mitochondrial protein-coding 626083735 Trim38 tripartite motif containing 38 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of defense response to virus (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of viral entry into host cell (ortholog) 14 42765509 42772997 + 22301074 116883210 MODEL JAAIVD010000009;XM_032884232 XP_032740123 E3 ubiquitin-protein ligase TRIM38 protein-coding 626083741 LOC116886433 uncharacterized LOC116886433 17 17723402 17765945 + 116886433 MODEL JAAIVD010000011;XR_004386105 ncrna 626083747 LOC116895916 TD and POZ domain-containing protein 3-like 3 120841476 120842556 + 116895916 MODEL JAAIVD010000012 pseudo 626083748 Phyhipl phytanoyl-CoA 2-hydroxylase interacting protein like FOUND IN cytoplasm (ortholog) 18 16278211 16320141 + 22301074;30032202 116887524 MODEL JAAIVD010000013;XM_032889149 XP_032745040 phytanoyl-CoA hydroxylase-interacting protein-like protein-coding 626083757 LOC116893347 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 157051866 157062437 - 30032202 116893347 MODEL JAAIVD010000001;XM_032895155 XP_032751046 protein-coding 626083765 Kcnj1 potassium inwardly rectifying channel subfamily J member 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP-activated inward rectifier potassium channel activity (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); circulatory system development (ortholog); gene expression (ortholog); ASSOCIATED WITH Bartter disease (ortholog); Bartter disease type 2 (ortholog); genetic disease (ortholog); FOUND IN plasma membrane (ortholog) 8 28063100 28093524 + 22301074;30032202 116907250 MODEL JAAIVD010000027;XM_032910207;XM_032910208 XP_032766098;XP_032766099 ATP-sensitive inward rectifier potassium channel 1 protein-coding 626083776 LOC116888867 protein BTG1-like X 103619561 103624665 + 30032202 116888867 MODEL JAAIVD010000014;XM_032890129 XP_032746020 protein-coding 626083785 Pmch pro-melanin concentrating hormone ENCODES a protein that exhibits type 1 melanin-concentrating hormone receptor binding (ortholog); INVOLVED IN drinking behavior (ortholog); feeding behavior (ortholog); lactation (ortholog); ASSOCIATED WITH Insulin Resistance (ortholog); obesity (ortholog); sleeping sickness (ortholog); FOUND IN extracellular space (ortholog); nucleus (ortholog) 1 167181577 167182887 + 22301074;30032202 116907719 MODEL JAAIVD010000025;XM_032910848 XP_032766739 pro-MCH protein-coding 626083792 LOC116891185 cytochrome P450 2B15 2 42574740 42586943 - 22301074;30032202 116891185 MODEL JAAIVD010000001;XM_032892003 XP_032747894 protein-coding 626083803 LOC116889930 olfactory receptor 10A4-like 1 160969971 160970933 + 22301074 116889930 MODEL JAAIVD010000025;XM_032890743 XP_032746634 protein-coding 626083806 LOC116909877 immunity-related GTPase family M protein 9 31465283 31473881 - 22301074;30032202 116909877 MODEL JAAIVD010000002;XM_032913614;XM_032913617 XP_032769505;XP_032769508 protein-coding 626083815 Pctp phosphatidylcholine transfer protein ENCODES a protein that exhibits phosphatidylcholine binding (ortholog); phosphatidylcholine transporter activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); negative regulation of cold-induced thermogenesis (ortholog); phospholipid transport (ortholog); FOUND IN cytosol (ortholog) 9 80800912 80821414 + 30032202 116909770 MODEL JAAIVD010000002;XM_032913457;XM_032913459 XP_032769348;XP_032769350 protein-coding 626083827 LOC116908350 small nucleolar RNA SNORD16 8 58480497 58480595 + 116908350 MODEL JAAIVD010000027;XR_004388901 snorna 626083830 LOC116907189 60S ribosomal protein L36a-like 8 3414359 3415821 - 116907189 MODEL JAAIVD010000027 pseudo 626083831 LOC116899789 U6 spliceosomal RNA 4 165498571 165498670 + 116899789 MODEL JAAIVD010000003 pseudo 626083832 LOC116904691 small nucleolar RNA SNORA48 6 77498586 77498729 + 116904691 MODEL JAAIVD010000024;XR_004388387 snorna 626083835 Synj1 synaptojanin 1 ENCODES a protein that exhibits EH domain binding (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); phosphatidylinositol phosphate 5-phosphatase activity (ortholog); INVOLVED IN learning (ortholog); neurotransmitter transport (ortholog); phosphatidylinositol dephosphorylation (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH basal cell carcinoma (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 53 (ortholog); FOUND IN clathrin coat of coated pit (ortholog); glutamatergic synapse (ortholog); membrane (ortholog) 4 53577428 53649308 + 22301074;30032202 116899004 MODEL JAAIVD010000003;XM_032900449 XP_032756340 synaptojanin-1 protein-coding 626083871 LOC116900672 cystatin-12 5 128321555 128325396 + 22301074 116900672 MODEL JAAIVD010000023;XM_032902376 XP_032758267 protein-coding 626083878 LOC116908267 selection and upkeep of intraepithelial T-cells protein 1-like 8 103789047 103789834 - 116908267 MODEL JAAIVD010000027 pseudo 626083879 LOC116887023 40S ribosomal protein S14-like 18 16462037 16462590 - 22301074;30032202 116887023 MODEL JAAIVD010000013;XM_032888517 XP_032744408 protein-coding 626083884 LOC116883157 ras-related protein Rab-28-like 1 259279328 259280196 + 116883157 MODEL JAAIVD010000025 pseudo 626083885 LOC116893338 SIGLEC family-like protein 1 2 155963879 155969522 + 30032202 116893338 MODEL JAAIVD010000001;XM_032895151 XP_032751042 protein-coding 626083892 LOC116887909 uncharacterized LOC116887909 X 53973391 53979026 - 116887909 MODEL JAAIVD010000014;XM_032889382 XP_032745273 uncharacterized protein LOC116887909 protein-coding 626083897 Nr4a2 nuclear receptor subfamily 4 group A member 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular response to corticotropin-releasing hormone stimulus (ortholog); cellular response to oxidative stress (ortholog); PARTICIPATES IN Parkinson's disease pathway; ASSOCIATED WITH Animal Toxoplasmosis (ortholog); Arsenic Poisoning (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nuclear speck (ortholog); nucleus (ortholog) 5 35007778 35024884 - 22301074;30032202 116901421 MODEL JAAIVD010000023;XM_032903309;XM_032903310;XM_032903311;XR_004387989 XP_032759200;XP_032759201;XP_032759202 protein-coding 626083918 Synpo2l synaptopodin 2 like INVOLVED IN heart morphogenesis (ortholog); positive regulation of Rho protein signal transduction (ortholog); positive regulation of stress fiber assembly (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN nucleus (ortholog); Z disc (ortholog) 12 90466188 90473974 - 30032202 116913657 MODEL JAAIVD010000007;XM_032917942;XM_032917943 XP_032773833;XP_032773834 synaptopodin 2-like protein protein-coding 626083926 LOC116907799 high mobility group protein B1 8 58581531 58582395 - 22301074;30032202 116907799 MODEL JAAIVD010000027;XM_032910944 XP_032766835 protein-coding 626083931 LOC116900429 olfactory receptor 4C15-like 5 70636924 70637858 + 116900429 MODEL JAAIVD010000023 pseudo 626083932 Gin1 gypsy retrotransposon integrase 1 ASSOCIATED WITH rheumatoid arthritis (ortholog) 4 168727659 168748231 - 22301074 116899683 MODEL JAAIVD010000003;XM_032901703;XM_032901704;XM_032901705 XP_032757594;XP_032757595;XP_032757596 gypsy retrotransposon integrase-like protein 1 protein-coding 626083949 LOC116895584 myelin P2 protein 3 144227175 144230498 - 22301074;30032202 116895584 MODEL JAAIVD010000012;XM_032896809 XP_032752700 protein-coding 626083957 Ephb6 EPH receptor B6 INVOLVED IN activated T cell proliferation (ortholog); positive regulation of T cell costimulation (ortholog); T cell mediated immunity (ortholog); ASSOCIATED WITH malaria (ortholog); myoepithelioma (ortholog); FOUND IN cell surface (ortholog) 6 98992630 98999906 - 22301074;30032202 116903911 MODEL JAAIVD010000024;XM_032906676 XP_032762567 ephrin type-B receptor 6 protein-coding 626083977 Ufd1 ubiquitin recognition factor in ER associated degradation 1 ENCODES a protein that exhibits ATPase binding (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); ERAD pathway (ortholog); negative regulation of RIG-I signaling pathway (ortholog); PARTICIPATES IN schizophrenia pathway; ASSOCIATED WITH congenital heart disease (ortholog); Craniofacial Abnormalities (ortholog); DiGeorge syndrome (ortholog); FOUND IN cytoplasm (ortholog); UFD1-NPL4 complex (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 4 4074702 4096016 + 30032202 116898678 MODEL JAAIVD010000003;XM_032899929 XP_032755820 ubiquitin recognition factor in ER-associated degradation protein 1 protein-coding 626083993 Ptprn protein tyrosine phosphatase receptor type N ENCODES a protein that exhibits GTPase binding (ortholog); spectrin binding (ortholog); ubiquitin-like protein ligase binding (ortholog); INVOLVED IN dense core granule maturation (ortholog); insulin secretion (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); type 1 diabetes mellitus (ortholog); FOUND IN axon terminus (ortholog); endosome (ortholog); Golgi apparatus (ortholog) 4 148603206 148618747 - 22301074;30032202 116899529 MODEL JAAIVD010000003;XM_032901399 XP_032757290 receptor-type tyrosine-protein phosphatase-like N protein-coding 626084020 Chrdl2 chordin like 2 INVOLVED IN chondrocyte differentiation (ortholog); negative regulation of BMP signaling pathway (ortholog) 2 98296332 98324876 + 22301074 116893965 MODEL JAAIVD010000001;XM_032895683;XM_032895684 XP_032751574;XP_032751575 chordin-like protein 2 protein-coding 626084039 Myo1g myosin IG ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cell gliding (ortholog); cell-substrate adhesion (ortholog); establishment of localization in cell (ortholog); FOUND IN filopodium (ortholog); lamellipodium (ortholog); leading edge membrane (ortholog) 11 75446542 75461782 - 22301074;30032202 116912688 MODEL JAAIVD010000006;XM_032916823 XP_032772714 unconventional myosin-Ig protein-coding 626084065 Utp25 UTP25 small subunit processome component INVOLVED IN embryonic organ development (ortholog); positive regulation of embryonic development (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN nucleolus (ortholog) 10 71092172 71113835 - 22301074;30032202 116911165 MODEL JAAIVD010000005;XM_032915027 XP_032770918 UTP25 small subunit processor component;digestive organ expansion factor homolog protein-coding 626084081 LOC116899839 small nucleolar RNA SNORA48 4 114895587 114895729 - 116899839 MODEL JAAIVD010000003;XR_004387836 snorna 626084084 Anapc10 anaphase promoting complex subunit 10 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH Mayer-Rokitansky-Kuster-Hauser syndrome type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); cytoplasm (ortholog) 17 20336266 20391268 - 22301074;30032202 116886049 MODEL JAAIVD010000011;XM_032887352 XP_032743243 anaphase-promoting complex subunit 10 protein-coding 626084093 Gpr132 G protein-coupled receptor 132 INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH autoimmune disease (ortholog) 7 130447256 130458714 - 22301074;30032202 116905928 MODEL JAAIVD010000026;XM_032908916 XP_032764807 probable G-protein coupled receptor 132 protein-coding 626084100 Aco1 aconitase 1 ENCODES a protein that exhibits 3 iron, 4 sulfur cluster binding (ortholog); 4 iron, 4 sulfur cluster binding (ortholog); aconitate hydratase activity (ortholog); INVOLVED IN citrate metabolic process (ortholog); intestinal absorption (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH Chronic Allograft Nephropathy (ortholog); Chronic Cerebral Hypoperfusion (ortholog); duodenal ulcer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 118012975 118068196 - 30032202 116902709 MODEL JAAIVD010000025;XM_032905065 XP_032760956 cytoplasmic aconitate hydratase protein-coding 626084125 LOC116913740 granzyme-like protein 2 12 68988076 68991068 - 22301074;30032202 116913740 MODEL JAAIVD010000007;XM_032918044 XP_032773935 protein-coding 626084134 Ncstn nicastrin ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); ATPase binding (ortholog); endopeptidase activator activity (ortholog); INVOLVED IN adult behavior (ortholog); amyloid precursor protein biosynthetic process (ortholog); amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); chronic myeloid leukemia (ortholog); Familial Acne Inversa 1 (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); gamma-secretase complex (ortholog) 10 51183248 51199063 - 30032202 116911713 MODEL JAAIVD010000005;XM_032915683 XP_032771574 protein-coding 626084155 LOC116900221 60S ribosomal protein L29-like 5 60967743 60968218 - 116900221 MODEL JAAIVD010000023 pseudo 626084156 C2H9orf40 chromosome 2 C9orf40 homolog 2 18718654 18723228 + 116891018 MODEL JAAIVD010000001;XM_032891698 XP_032747589 uncharacterized protein C9orf40 homolog protein-coding 626084162 LOC116895056 small nucleolar RNA SNORA17 2 130411131 130411267 + 116895056 MODEL JAAIVD010000001;XR_004387237 snorna 626084165 Tph2 tryptophan hydroxylase 2 ENCODES a protein that exhibits tryptophan 5-monooxygenase activity (ortholog); INVOLVED IN cellular response to lithium ion (ortholog); circadian rhythm (ortholog); response to activity (ortholog); ASSOCIATED WITH acute stress disorder (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); neuron projection (ortholog); neuronal cell body (ortholog) 1 193235628 193336387 - 22301074;30032202 116890018 MODEL JAAIVD010000025;XM_032890799 XP_032746690 tryptophan 5-hydroxylase 2 protein-coding 626084180 LOC116900358 olfactory receptor 5W2-like 5 69319770 69320704 + 116900358 MODEL JAAIVD010000023 pseudo 626084181 LOC116895080 U2 spliceosomal RNA 2 78140072 78140227 + 116895080 MODEL JAAIVD010000001 pseudo 626084182 LOC116902618 small nucleolar RNA SNORD17 5 123911438 123911676 - 116902618 MODEL JAAIVD010000023;XR_004388196 snorna 626084185 Myo7a myosin VIIA ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ADP binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); auditory receptor cell stereocilium organization (ortholog); cell projection organization (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; retinitis pigmentosa pathway; ASSOCIATED WITH Auditory Neuropathy (ortholog); autosomal dominant nonsyndromic deafness 11 (ortholog); autosomal dominant nonsyndromic deafness 80 (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 96333552 96402681 - 22301074 116893949 MODEL JAAIVD010000001;XM_032895664;XM_032895665;XM_032895666;XM_032895667 XP_032751555;XP_032751556;XP_032751557;XP_032751558 unconventional myosin-VIIa protein-coding 626084248 Cdk5rap3 CDK5 regulatory subunit associated protein 3 ENCODES a protein that exhibits cyclin binding (ortholog); MDM2/MDM4 family protein binding (ortholog); mitogen-activated protein kinase binding (ortholog); INVOLVED IN apoptotic nuclear changes (ortholog); cell population proliferation (ortholog); definitive erythrocyte differentiation (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 57468226 57477049 + 30032202 116909651 MODEL JAAIVD010000002;XM_032913304 XP_032769195 CDK5 regulatory subunit-associated protein 3 protein-coding 626084266 LOC116888859 uncharacterized LOC116888859 X 88824037 88862141 + 116888859 MODEL JAAIVD010000014;XR_004386348;XR_004386349 ncrna 626084275 LOC116886084 cytochrome c oxidase assembly factor 6 homolog ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); respiratory chain complex IV assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 13 (ortholog); mitochondrial complex IV deficiency nuclear type 2 (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 17 45934409 45940675 + 22301074;30032202 116886084 MODEL JAAIVD010000011;XM_032887404 XP_032743295 protein-coding 626084281 Cpa1 carboxypeptidase A1 ENCODES a protein that exhibits exopeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN proteolysis involved in protein catabolic process (ortholog); response to cadmium ion (ortholog); ASSOCIATED WITH Cadmium Poisoning (ortholog); Chronic Pancreatitis (ortholog); Hereditary Pancreatitis (ortholog); FOUND IN extracellular space (ortholog) 6 108915987 108922072 - 22301074;30032202 116902907 MODEL JAAIVD010000024;XM_032905232 XP_032761123 protein-coding 626084295 LOC116887449 uncharacterized LOC116887449 18 8322076 8323078 + 116887449 MODEL JAAIVD010000013;XR_004386216 ncrna 626084301 LOC116902975 40S ribosomal protein S25-like 6 131607017 131607388 + 116902975 MODEL JAAIVD010000024 pseudo 626084302 Cmpk2 cytidine/uridine monophosphate kinase 2 ENCODES a protein that exhibits dTMP kinase activity (ortholog); dUMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); dTDP biosynthetic process (ortholog); dUDP biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH Idiopathic Basal Ganglia Calcification 10 (ortholog); multiple sclerosis (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 7 39998794 40010240 + 30032202 116904924 MODEL JAAIVD010000026;XM_032907553 XP_032763444 UMP-CMP kinase 2, mitochondrial protein-coding 626084311 C15H18orf54 chromosome 15 C18orf54 homolog INVOLVED IN negative regulation of cell population proliferation (ortholog) 15 60792992 60815661 + 116884547 MODEL JAAIVD010000010;XM_032885685 XP_032741576 lung adenoma susceptibility protein 2 protein-coding 626084323 LOC116894544 V-type proton ATPase 16 kDa proteolipid subunit-like 2 177456799 177457284 + 116894544 MODEL JAAIVD010000001 pseudo 626084324 LOC116898064 galactoside 3(4)-L-fucosyltransferase-like 4 88111792 88113164 + 116898064 MODEL JAAIVD010000003 pseudo 626084325 Mib2 MIB E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); protein ubiquitination (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 1 5026270 5041873 + 22301074;30032202 116891844 MODEL JAAIVD010000025;XM_032893214;XM_032893222;XM_032893232;XM_032893243;XM_032893252;XM_032893261;XM_032893269;XM_032893274;XM_032893283;XM_032893291 XP_032749105;XP_032749113;XP_032749123;XP_032749134;XP_032749143;XP_032749152;XP_032749160;XP_032749165;XP_032749174;XP_032749182 E3 ubiquitin-protein ligase MIB2;mindbomb E3 ubiquitin protein ligase 2 protein-coding 626084373 LOC116894873 U6 spliceosomal RNA 2 144686625 144686729 - 116894873 MODEL JAAIVD010000001;XR_004387085 snrna 626084376 LOC116903246 40S ribosomal protein S18-like 1 134595031 134626049 - 116903246 MODEL JAAIVD010000025 pseudo 626084377 Pax9 paired box 9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); endoderm development (ortholog); face morphogenesis (ortholog); ASSOCIATED WITH anodontia (ortholog); cleft palate (ortholog); Familial Prostate Cancer (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 7 70061024 70077633 + 30032202 116905067 MODEL JAAIVD010000026;XM_032907772 XP_032763663 paired box protein Pax-9 protein-coding 626084385 LOC116894355 tonin 2 155410860 155414928 - 22301074;30032202 116894355 MODEL JAAIVD010000001;XM_032896055;XM_032896056;XM_032896057 XP_032751946;XP_032751947;XP_032751948 protein-coding 626084404 LOC116883983 histone deacetylase 1-like 14 29182824 29187878 - 116883983 MODEL JAAIVD010000009 pseudo 626084405 Avp arginine vasopressin ENCODES a protein that exhibits hormone activity (ortholog); neuropeptide hormone activity (ortholog); protein kinase activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); grooming behavior (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 1; vasopressin signaling pathway via receptor type 2; ASSOCIATED WITH acute kidney failure (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN dendrite (ortholog); extracellular region (ortholog); extracellular space (ortholog) 5 110318032 110320020 - 22301074;30032202 116900636 MODEL JAAIVD010000023;XM_032902348 XP_032758239 vasopressin-neurophysin 2-copeptin protein-coding 626084412 Smarca5 SNF2 related chromatin remodeling ATPase 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to leukemia inhibitory factor (ortholog); chromatin organization (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN ACF complex (ortholog); B-WICH complex (ortholog); CERF complex (ortholog) 17 19341937 19375178 + 22301074;30032202 116886102 MODEL JAAIVD010000011;XM_032887431 XP_032743322 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 protein-coding 626084440 H1-6 H1.6 linker histone, cluster member ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); flagellated sperm motility (ortholog); spermatogenesis (ortholog); FOUND IN condensed nuclear chromosome (ortholog) 14 42695877 42698100 + 22301074 116883559 MODEL JAAIVD010000009;XM_032884739 XP_032740630 histone H1t protein-coding 626084445 Hnrnpa0 heterogeneous nuclear ribonucleoprotein A0 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); protein kinase binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); inflammatory response (ortholog); response to lipopolysaccharide (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH gastric adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); synapse (ortholog) 14 79984390 79987063 + 22301074 116883592 MODEL JAAIVD010000009;XM_032884772 XP_032740663 protein-coding 626084450 LOC116911611 olfactory receptor 6K3-like 10 52792069 52793016 + 22301074 116911611 MODEL JAAIVD010000005;XM_032915585 XP_032771476 protein-coding 626084453 Lto1 LTO1 maturation factor of ABCE1 INVOLVED IN protein maturation (ortholog); ribosomal large subunit biogenesis (ortholog); translational initiation (ortholog) 2 4816395 4821510 - 116890817 MODEL JAAIVD010000001;XM_032891314;XM_032891315 XP_032747205;XP_032747206 protein LTO1 homolog protein-coding 626084466 LOC116884893 60S ribosomal protein L39-like 15 76531 79011 + 116884893 MODEL JAAIVD010000010 pseudo 626084467 LOC116895408 uncharacterized LOC116895408 3 61311539 61312804 - 116895408 MODEL JAAIVD010000012;XR_004387273 ncrna 626084471 Tmem8b transmembrane protein 8B INVOLVED IN cell-matrix adhesion (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 1 2802924 2832519 - 30032202 116890945 MODEL JAAIVD010000025;XM_032891590 XP_032747481 protein-coding 626084488 LOC116906642 PCNA-associated factor-like 8 43500975 43501305 - 116906642 MODEL JAAIVD010000027 pseudo 626084489 LOC116894048 olfactory receptor 52I2-like 2 102615592 102616584 + 22301074 116894048 MODEL JAAIVD010000001;XM_032895769 XP_032751660 protein-coding 626084493 Dusp9 dual specificity phosphatase 9 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of MAPK cascade (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog) X 129260375 129262412 + 22301074;30032202 116888223 MODEL JAAIVD010000014;XM_032889512 XP_032745403 dual specificity protein phosphatase 9 protein-coding 626084499 Ltn1 listerin E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); rescue of stalled ribosome (ortholog); ribosome-associated ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); RQC complex (ortholog) 4 56425693 56480135 + 22301074;30032202 116899030 MODEL JAAIVD010000003;XM_032900483 XP_032756374 E3 ubiquitin-protein ligase listerin protein-coding 626084532 Dnajc3 DnaJ heat shock protein family (Hsp40) member C3 ENCODES a protein that exhibits misfolded protein binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN cellular response to cold (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation (ortholog); ASSOCIATED WITH Combined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 12 6932381 6970507 - 30032202 116913318 MODEL JAAIVD010000007;XM_032917464 XP_032773355 dnaJ homolog subfamily C member 3 protein-coding 626084548 P2rx7 purinergic receptor P2X 7 ENCODES a protein that exhibits ATP binding (ortholog); channel activity (ortholog); copper ion binding (ortholog); INVOLVED IN apoptotic signaling pathway (ortholog); ATP export (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); atrial fibrillation (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); FOUND IN bleb (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 16 31142790 31183456 - 22301074;30032202 116885315 MODEL JAAIVD010000004;XM_032886575;XM_032886576 XP_032742466;XP_032742467 P2X purinoceptor 7 protein-coding 626084568 Wdr81 WD repeat domain 81 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN aggrephagy (ortholog); early endosome to late endosome transport (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); cerebellar ataxia (ortholog); cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome 2 (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); early endosome membrane (ortholog) 9 94151593 94164791 - 22301074;30032202 116909016 MODEL JAAIVD010000002;XM_032912490;XR_004389045 XP_032768381 WD repeat-containing protein 81 protein-coding 626084586 Fbxw4 F-box and WD repeat domain containing 4 INVOLVED IN cartilage development (ortholog); embryonic digit morphogenesis (ortholog); limb development (ortholog); ASSOCIATED WITH split hand-foot malformation (ortholog); split hand-foot malformation 3 (ortholog) 2 45060002 45142087 - 22301074;30032202 116891229 MODEL JAAIVD010000001;XM_032892078 XP_032747969 F-box/WD repeat-containing protein 4 protein-coding 626084599 LOC116885067 small nucleolar RNA SNORA17 15 13569490 13569606 - 116885067 MODEL JAAIVD010000010 pseudo 626084600 LOC116912159 ATP-binding cassette sub-family G member 3-like 11 15021587 15066555 + 22301074;30032202 116912159 MODEL JAAIVD010000006;XM_032916079;XM_032916080 XP_032771970;XP_032771971 protein-coding 626084623 Arid1a AT-rich interaction domain 1A ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cardiac chamber development (ortholog); cardiac muscle cell differentiation (ortholog); chromatin organization (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; pancreatic cancer pathway; SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH Acute Hepatitis (ortholog); adenocarcinoma (ortholog); adenoid cystic carcinoma (ortholog); FOUND IN chromatin (ortholog); nBAF complex (ortholog); npBAF complex (ortholog) 1 24481194 24554564 + 22301074;30032202 116894998 MODEL JAAIVD010000025;XM_032896510;XM_032896511;XM_032896512;XM_032896513 XP_032752401;XP_032752402;XP_032752403;XP_032752404 AT-rich interactive domain-containing protein 1A protein-coding 626084654 LOC116905604 high mobility group protein B1-like 1 150909095 150909740 - 116905604 MODEL JAAIVD010000025 pseudo 626084655 Hpcal4 hippocalcin like 4 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN response to heat (ortholog) 1 35070713 35082632 - 22301074;30032202 116897054 MODEL JAAIVD010000025;XM_032898678 XP_032754569 hippocalcin-like protein 4 protein-coding 626084664 LOC116888262 high mobility group protein B4-like X 90281792 90282328 - 116888262 MODEL JAAIVD010000014 pseudo 626084665 LOC116894766 microtubule-associated protein RP/EB family member 1-like 2 198864661 198881556 - 116894766 MODEL JAAIVD010000001 pseudo 626084666 LOC116902084 zinc finger protein 431-like 5 130056624 130073962 - 30032202 116902084 MODEL JAAIVD010000023;XM_032904382 XP_032760273 protein-coding 626084674 Slc35b1 solute carrier family 35 member B1 ENCODES a protein that exhibits ATP:ADP antiporter activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); nucleoplasm (ortholog) 9 58996101 59003382 - 30032202;7667285;9010752 116909555 MODEL D87991;JAAIVD010000002;XM_032913173;XM_032913174 BAA13527;XP_032769064;XP_032769065 UGTrel1 protein-coding 626084691 LOC116884734 60S ribosomal protein L9-like 15 49596812 49597384 - 116884734 MODEL JAAIVD010000010 pseudo 626084692 LOC116898448 ubiquitin-conjugating enzyme E2 N-like 4 96413116 96497812 - 116898448 MODEL JAAIVD010000003 pseudo 626084693 LOC116902642 U2 spliceosomal RNA 5 63201225 63201401 - 116902642 MODEL JAAIVD010000023 pseudo 626084694 Qrfp pyroglutamylated RFamide peptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); orexigenic neuropeptide QRFP receptor binding (ortholog); INVOLVED IN grooming behavior (ortholog); locomotory behavior (ortholog); neuropeptide signaling pathway (ortholog) 5 3831408 3831782 + 22301074;30032202 116900049 MODEL JAAIVD010000023;XM_032901843 XP_032757734 orexigenic neuropeptide QRFP protein-coding 626084697 LOC116894374 protein transport protein Sec61 subunit gamma-like 2 156483941 156485593 - 22301074;30032202 116894374 MODEL JAAIVD010000001;XM_032896081 XP_032751972 protein-coding 626084702 Ankrd50 ankyrin repeat domain containing 50 INVOLVED IN endocytic recycling (ortholog) 3 115484541 115518858 + 22301074 116896914 MODEL JAAIVD010000012;XM_032898474;XM_032898475;XM_032898476 XP_032754365;XP_032754366;XP_032754367 ankyrin repeat domain 50;ankyrin repeat domain-containing protein 50 protein-coding 626084715 LOC116914191 U6 spliceosomal RNA 12 38211564 38211653 + 116914191 MODEL JAAIVD010000007 pseudo 626084716 LOC116912048 Y-linked testis-specific protein 1-like 11 85443454 85444270 - 116912048 MODEL JAAIVD010000006 pseudo 626084717 Amfr autocrine motility factor receptor ENCODES a protein that exhibits BAT3 complex binding (ortholog); identical protein binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); breast ductal carcinoma (ortholog); FOUND IN dendrite (ortholog); Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog) 17 890749 925638 - 22301074;30032202 116886567 MODEL JAAIVD010000011;XM_032888087 XP_032743978 E3 ubiquitin-protein ligase AMFR protein-coding 626084735 LOC116914994 chromobox protein homolog 3-like 13 28566006 28566621 + 116914994 MODEL JAAIVD010000008 pseudo 626084736 LOC116890528 small nucleolar RNA SNORA17 1 104508008 104508139 - 116890528 MODEL JAAIVD010000025;XR_004386709 snorna 626084739 Ido2 indoleamine 2,3-dioxygenase 2 ENCODES a protein that exhibits indoleamine 2,3-dioxygenase activity (ortholog); INVOLVED IN L-tryptophan catabolic process to kynurenine (ortholog); PARTICIPATES IN kynurenine metabolic pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Endotoxemia (ortholog); liver cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) 13 61891402 61915654 + 22301074;30032202 116914691 MODEL JAAIVD010000008;XM_032919111 XP_032775002 protein-coding 626084752 Pex6 peroxisomal biogenesis factor 6 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein transporter activity (ortholog); INVOLVED IN peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); protein import into peroxisome matrix, receptor recycling (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 3 (ortholog); cerebellar ataxia (ortholog); Cognitive Dysfunction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal membrane (ortholog) 4 83141804 83153684 - 22301074;30032202 116899094 MODEL JAAIVD010000003;XM_032900604 XP_032756495 peroxisome biogenesis factor 6 protein-coding 626084772 Cpeb2 cytoplasmic polyadenylation element binding protein 2 ENCODES a protein that exhibits GTPase inhibitor activity (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); negative regulation of cytoplasmic translation (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nucleus (ortholog) 11 62443541 62496386 - 30032202 116912774 MODEL JAAIVD010000006;XM_032916926;XM_032916927;XM_032916928;XM_032916929;XM_032916930;XM_032916931;XM_032916932;XM_032916933 XP_032772817;XP_032772818;XP_032772819;XP_032772820;XP_032772821;XP_032772822;XP_032772823;XP_032772824 cytoplasmic polyadenylation element-binding protein 2 protein-coding 626084796 Nefl neurofilament light chain ENCODES a protein that exhibits identical protein binding (ortholog); phospholipase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); axonal transport of mitochondrion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH acute disseminated encephalomyelitis (ortholog); AIDS Dementia Complex (ortholog); Alzheimer's disease (ortholog); FOUND IN axon (ortholog); cholinergic synapse (ortholog); cytoplasm (ortholog) 12 56389610 56394854 - 22301074;30032202 116913402 MODEL JAAIVD010000007;XM_032917585 XP_032773476 neurofilament light polypeptide protein-coding 626084804 Vbp1 VHL binding protein 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN negative regulation of amyloid fibril formation (ortholog); protein folding (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN cytosol (ortholog); prefoldin complex (ortholog) X 273297 295485 - 22301074;30032202 116888508 MODEL JAAIVD010000014;XM_032889801 XP_032745692 prefoldin subunit 3 protein-coding 626084814 Mcm6 minichromosome maintenance complex component 6 ENCODES a protein that exhibits DNA helicase activity (ortholog); identical protein binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN DNA replication (ortholog); ASSOCIATED WITH Lactose Intolerance, Adult Type (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN CMG complex (ortholog); cytosol (ortholog); MCM complex (ortholog) 10 7360015 7385094 + 22301074;30032202 116911407 MODEL JAAIVD010000005;XM_032915368 XP_032771259 DNA replication licensing factor MCM6 protein-coding 626084835 LOC116910325 cytochrome b-c1 complex subunit 7 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH depressive disorder (ortholog); inherited metabolic disorder (ortholog); mitochondrial complex III deficiency nuclear type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex III (ortholog) 1 206393708 206397952 - 22301074;30032202 116910325 MODEL JAAIVD010000025;XM_032914188 XP_032770079 protein-coding 626084843 Kdm4c lysine demethylase 4C ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); blastocyst formation (ortholog); positive regulation of cell population proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH alopecia areata (ortholog); autistic disorder (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); pericentric heterochromatin (ortholog) 1 78999503 79181365 - 30032202 116901071 MODEL JAAIVD010000025;XM_032902640;XM_032902645;XM_032902651;XM_032902657;XM_032902661;XR_004387957 XP_032758531;XP_032758536;XP_032758542;XP_032758548;XP_032758552 lysine-specific demethylase 4C protein-coding 626084887 LOC116899761 U6 spliceosomal RNA 4 66451245 66451350 - 116899761 MODEL JAAIVD010000003;XR_004387775 snrna 626084890 Cldn11 claudin 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axon ensheathment (ortholog); cell adhesion (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); hypomyelinating leukodystrophy 22 (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN axon (ortholog); basal part of cell (ortholog); bicellular tight junction (ortholog) 3 125394430 125407967 + 22301074;30032202 116896982 MODEL JAAIVD010000012;XM_032898570 XP_032754461 claudin-11 protein-coding 626084897 Sertad3 SERTA domain containing 3 INVOLVED IN negative regulation of cell growth (ortholog); positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 2 168467346 168471449 - 30032202 116892428 MODEL JAAIVD010000001;XM_032894114 XP_032750005 SERTA domain-containing protein 3 protein-coding 626084903 LOC116913176 60S ribosomal protein L26-like 1 12 56894433 56894893 + 116913176 MODEL JAAIVD010000007 pseudo 626084904 LOC116903708 igE-binding protein-like 6 7599235 7604047 + 116903708 MODEL JAAIVD010000024 pseudo 626084905 LOC116898574 glyceraldehyde-3-phosphate dehydrogenase-like 4 160956242 160957239 - 116898574 MODEL JAAIVD010000003 pseudo 626084906 LOC116890160 cytochrome P450 2D26-like 1 252193506 252197519 - 22301074;30032202 116890160 MODEL JAAIVD010000025;XM_032890895 XP_032746786 protein-coding 626084919 LOC116902247 uncharacterized LOC116902247 5 140018460 140026184 - 116902247 MODEL JAAIVD010000023;XR_004388057 ncrna 626084924 LOC116893990 olfactomedin-4-like 2 101490777 101498620 + 30032202 116893990 MODEL JAAIVD010000001;XM_032895704 XP_032751595 protein-coding 626084934 Fam180a family with sequence similarity 180 member A ASSOCIATED WITH endometriosis (ortholog); hepatocellular carcinoma (ortholog) 6 104337298 104351461 + 116902894 MODEL JAAIVD010000024;XM_032905224 XP_032761115 protein FAM180A protein-coding 626084941 LOC116883892 peroxiredoxin-1-like 14 26620408 26622427 - 116883892 MODEL JAAIVD010000009 pseudo 626084942 Galnt14 polypeptide N-acetylgalactosaminyltransferase 14 ASSOCIATED WITH Hydrops Fetalis (ortholog); intestinal volvulus (ortholog) 7 19527187 19745363 + 30032202 116905944 MODEL JAAIVD010000026;XM_032908938 XP_032764829 protein-coding 626084961 Ticrr TOPBP1 interacting checkpoint and replication regulator ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN regulation of DNA-templated DNA replication initiation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 120549754 120591046 - 30032202 116891940 MODEL JAAIVD010000001;XM_032893381 XP_032749272 treslin protein-coding 626084987 Tmem158 transmembrane protein 158 ENCODES a protein that exhibits peptide binding (ortholog) 8 114389975 114391749 - 30032202 116908022 MODEL JAAIVD010000027;XM_032911284 XP_032767175 protein-coding 626084992 LOC116902835 40S ribosomal protein S23-like 6 89601351 89601927 - 116902835 MODEL JAAIVD010000024 pseudo 626084993 Slc1a3 solute carrier family 1 member 3 ENCODES a protein that exhibits acidic amino acid transmembrane transporter activity (ortholog); amino acid binding (ortholog); glutamate binding (ortholog); INVOLVED IN auditory behavior (ortholog); cell morphogenesis involved in neuron differentiation (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); epilepsy (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell periphery (ortholog) 3 171794220 171868023 + 30032202 116897136 MODEL JAAIVD010000012;XM_032898801 XP_032754692 excitatory amino acid transporter 1 protein-coding 626085007 LOC116886224 histidine triad nucleotide-binding protein 1 17 14160936 14161505 - 30032202 116886224 MODEL JAAIVD010000011;XM_032887617 XP_032743508 protein-coding 626085012 Prrc2b proline rich coiled-coil 2B INVOLVED IN in utero embryonic development (ortholog) 5 3403682 3487246 - 30032202 116901155 MODEL JAAIVD010000023;XM_032902796 XP_032758687 protein PRRC2B protein-coding 626085048 Gnb2 G protein subunit beta 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); GTPase binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND DYSMORPHIC FACIES (ortholog); FOUND IN cell body (ortholog); parallel fiber to Purkinje cell synapse (ortholog); perinuclear region of cytoplasm (ortholog) 16 16485254 16490298 + 22301074;30032202 116885137 MODEL JAAIVD010000004;XM_032886320 XP_032742211 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-2 protein-coding 626085061 LOC116911278 RT1 class I histocompatibility antigen, AA alpha chain-like 10 89599433 89602513 - 22301074;30032202 116911278 MODEL JAAIVD010000005;XM_032915184 XP_032771075 protein-coding 626085072 LOC116894839 U6 spliceosomal RNA 2 43901327 43901433 + 116894839 MODEL JAAIVD010000001;XR_004387054 snrna 626085075 Sycn syncollin 2 167458585 167459915 - 22301074;30032202 116892387 MODEL JAAIVD010000001;XM_032894053 XP_032749944 protein-coding 626085081 Gemin2 gem nuclear organelle associated protein 2 INVOLVED IN protein-containing complex assembly (ortholog); spliceosomal snRNP assembly (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Gemini of Cajal bodies (ortholog) 7 72311025 72324843 + 22301074;30032202 116905079 MODEL JAAIVD010000026;XM_032907787 XP_032763678 gem-associated protein 2 protein-coding 626085095 Wtap WT1 associated protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA processing (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) 2 191714874 191740045 - 22301074;30032202 116892840 MODEL JAAIVD010000001;XM_032894726;XM_032894727;XM_032894728 XP_032750617;XP_032750618;XP_032750619 pre-mRNA-splicing regulator WTAP protein-coding 626085115 Arhgap1 Rho GTPase activating protein 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosomal transport (ortholog); negative regulation of endocytic recycling (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Premature Aging (ortholog); FOUND IN cell leading edge (ortholog); cilium (ortholog); cytoplasm (ortholog) 5 65795449 65816961 + 30032202 116901625 MODEL JAAIVD010000023;XM_032903680;XM_032903681;XM_032903682;XM_032903683;XM_032903684;XM_032903685;XM_032903686;XM_032903687;XM_032903688;XM_032903689;XM_032903690;XM_032903691;XM_032903692;XM_032903694;XM_032903695;XM_032903696;XM_032903697 XP_032759571;XP_032759572;XP_032759573;XP_032759574;XP_032759575;XP_032759576;XP_032759577;XP_032759578;XP_032759579;XP_032759580;XP_032759581;XP_032759582;XP_032759583;XP_032759585;XP_032759586;XP_032759587;XP_032759588 rho GTPase-activating protein 1 protein-coding 626085173 Klf8 KLF transcription factor 8 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) X 18484578 18657817 + 30032202 116888376 MODEL JAAIVD010000014;XM_032889653;XM_032889654 XP_032745544;XP_032745545 Krueppel-like factor 8;Kruppel like factor 8 protein-coding 626085187 Lgr4 leucine rich repeat containing G protein-coupled receptor 4 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH glaucoma (ortholog); Self-Limited Delayed Puberty (ortholog); FOUND IN plasma membrane (ortholog) 5 88218436 88314808 + 22301074 116901728 MODEL JAAIVD010000023;XM_032903868 XP_032759759 leucine-rich repeat-containing G-protein coupled receptor 4 protein-coding 626085209 Rps29 ribosomal protein S29 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); zinc ion binding (ortholog); INVOLVED IN cytoplasmic translation (ortholog); positive regulation of apoptotic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 13 (ortholog); genetic disease (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic small ribosomal subunit (ortholog); ribosome (ortholog) 7 82824792 82826167 - 22301074;30032202 116905110 MODEL JAAIVD010000026;XM_032907847 XP_032763738 40S ribosomal protein S29 protein-coding 626085216 Gcg glucagon ENCODES a protein that exhibits gastric inhibitory polypeptide receptor binding (ortholog); glucagon receptor binding (ortholog); hormone activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glucagon signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 5 40062150 40068198 - 22301074;30032202 116900186 MODEL JAAIVD010000023;XM_032901941;XM_032901942 XP_032757832;XP_032757833 protein-coding 626085227 Polr2a RNA polymerase II subunit A ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-directed RNA polymerase activity (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); DNA-templated transcription termination (ortholog); positive regulation of RNA splicing (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); Huntington's disease (ortholog); FOUND IN chromosome (ortholog); euchromatin (ortholog); nucleolus (ortholog) 9 49337950 49363776 - 22301074;30032202 116910144 MODEL JAAIVD010000002;XM_032913993 XP_032769884 DNA-directed RNA polymerase II subunit RPB1 protein-coding 626085260 Rab19 RAB19, member RAS oncogene family ASSOCIATED WITH syndactyly (ortholog) 6 100402150 100411784 - 22301074;30032202 116903932 MODEL JAAIVD010000024;XM_032906706 XP_032762597 ras-related protein Rab-19 protein-coding 626085268 LOC116898440 cytochrome P450 2K6-like 4 95015037 95031951 - 22301074;30032202 116898440 MODEL JAAIVD010000003;XM_032899710 XP_032755601 protein-coding 626085279 Jph2 junctophilin 2 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); dilated cardiomyopathy 2E (ortholog); FOUND IN junctional membrane complex (ortholog); membrane (ortholog); nucleus (ortholog) 5 154582340 154647846 + 22301074;30032202 116900792 MODEL JAAIVD010000023;XM_032902503 XP_032758394 junctophilin-2 protein-coding 626085289 Prdm6 PR/SET domain 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of smooth muscle cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH genetic disease (ortholog); patent ductus arteriosus (ortholog); Patent Ductus Arteriosus 3 (ortholog); FOUND IN nucleus (ortholog) 15 78186840 78290058 - 22301074;30032202 116884548 MODEL JAAIVD010000010;XM_032885686 XP_032741577 putative histone-lysine N-methyltransferase PRDM6 protein-coding 626085299 LOC116911630 adenylate kinase 2, mitochondrial-like 10 43267816 43268478 - 116911630 MODEL JAAIVD010000005 pseudo 626085300 Tdrd12 tudor domain containing 12 INVOLVED IN fertilization (ortholog); male meiotic nuclear division (ortholog); piRNA processing (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN PET complex (ortholog) 2 163122890 163191905 + 22301074;30032202 116894436 MODEL JAAIVD010000001;XM_032896138 XP_032752029 putative ATP-dependent RNA helicase TDRD12 protein-coding 626085333 LOC116912995 U1 spliceosomal RNA 11 468046 468213 + 116912995 MODEL JAAIVD010000006;XR_004389558 snrna 626085336 LOC116903873 zinc finger protein 398-like 6 92924890 92940952 - 116903873 MODEL JAAIVD010000024;XM_032906626 XP_032762517 protein-coding 626085347 Rpl37a ribosomal protein L37a ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 4 146231811 146234153 + 22301074 116899488 MODEL JAAIVD010000003;XM_032901320;XM_032901321 XP_032757211;XP_032757212 60S ribosomal protein L37a protein-coding 626085358 Ssna1 SS nuclear autoantigen 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axon arborization (ortholog); axon extension (ortholog); axonogenesis (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); centriole (ortholog) 5 11911270 11912717 + 30032202 116901312 MODEL JAAIVD010000023;XM_032903122 XP_032759013 Sjoegren syndrome nuclear autoantigen 1 protein-coding 626085365 Gcn1 GCN1 activator of EIF2AK4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein kinase regulator activity (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); GCN2-mediated signaling (ortholog); protein K6-linked ubiquitination (ortholog); ASSOCIATED WITH fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 16 38203167 38258434 - 30032202 116885271 MODEL JAAIVD010000004;XM_032886505 XP_032742396 eIF-2-alpha kinase activator GCN1 protein-coding 626085426 Zdhhc1 zDHHC palmitoyltransferase 1 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); protein-cysteine S-palmitoyltransferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); NLRP3 inflammasome complex assembly (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endosome membrane (ortholog) 17 25200907 25226070 - 30032202 116886330 MODEL JAAIVD010000011;XM_032887779;XM_032887780;XM_032887781;XM_032887782;XM_032887783;XM_032887784 XP_032743670;XP_032743671;XP_032743672;XP_032743673;XP_032743674;XP_032743675 probable palmitoyltransferase ZDHHC1;zinc finger DHHC-type containing 1 protein-coding 626085456 Pbx4 PBX homeobox 4 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); FOUND IN XY body (ortholog) 13 12095090 12139025 + 22301074;30032202 116914656 MODEL JAAIVD010000008;XM_032919057 XP_032774948 pre-B-cell leukemia transcription factor 4 protein-coding 626085468 Washc5 WASH complex subunit 5 INVOLVED IN endosomal transport (ortholog); lysosome organization (ortholog); meiotic spindle assembly (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); neuronal cell body (ortholog) 1 233845496 233887905 - 22301074;30032202 116912009 MODEL JAAIVD010000025;XM_032915905 XP_032771796 protein-coding 626085500 Tbc1d31 TBC1 domain family member 31 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Urogenital Abnormalities (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 232237411 232297290 + 22301074;30032202 116911680 MODEL JAAIVD010000025;XM_032915637;XM_032915644 XP_032771528;XP_032771535 protein-coding 626085528 Cdt1 chromatin licensing and DNA replication factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); DNA replication checkpoint signaling (ortholog); DNA replication preinitiation complex assembly (ortholog); ASSOCIATED WITH adenine phosphoribosyltransferase deficiency (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN kinetochore (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 17 42198039 42202842 + 30032202 116886124 MODEL JAAIVD010000011;XM_032887464 XP_032743355 DNA replication factor Cdt1 protein-coding 626085542 Ftmt ferritin mitochondrial ENCODES a protein that exhibits ferroxidase activity (ortholog); iron ion binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); protein maturation (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; hereditary coproporphyria pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN mitochondrion (ortholog) 15 35566613 35567848 - 22301074;30032202 116884925 MODEL JAAIVD010000010;XM_032886145 XP_032742036 ferritin, mitochondrial protein-coding 626085547 Dedd2 death effector domain containing 2 INVOLVED IN apoptotic nuclear changes (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); positive regulation of extrinsic apoptotic signaling pathway (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 2 169494089 169509593 + 22301074;30032202 116892469 MODEL JAAIVD010000001;XM_032894187 XP_032750078 DNA-binding death effector domain-containing protein 2 protein-coding 626085556 LOC116907099 calsyntenin-2-like 8 89207220 89438724 - 116907099 MODEL JAAIVD010000027;XM_032910067 XP_032765958 protein-coding 626085562 LOC116905600 protein SET-like 7 10902596 10914403 - 116905600 MODEL JAAIVD010000026 pseudo 626085563 Tbc1d22a TBC1 domain family member 22A ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog) 1 255553059 255844204 + 30032202 116914770 MODEL JAAIVD010000025;XM_032919220;XM_032919227 XP_032775111;XP_032775118 protein-coding 626085585 Rigi RNA sensor RIG-I ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); hepatitis C (ortholog); FOUND IN actin cytoskeleton (ortholog); bicellular tight junction (ortholog); cytoplasm (ortholog) 1 117962791 118007380 + 22301074;30032202 116902699 MODEL JAAIVD010000025;XM_032905057 XP_032760948 Ddx58 DExD/H-box helicase 58;probable ATP-dependent RNA helicase DDX58 protein-coding 626085608 Cdkl5 cyclin dependent kinase like 5 ENCODES a protein that exhibits ATP binding (ortholog); kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); neuron migration (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Angelman syndrome (ortholog); autistic disorder (ortholog); Christianson syndrome (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) X 32169536 32352876 - 22301074;30032202 116888308 MODEL JAAIVD010000014;XM_032889581 XP_032745472 cyclin-dependent kinase-like 5 protein-coding 626085630 LOC116902225 uncharacterized LOC116902225 5 136769450 136799996 + 116902225 MODEL JAAIVD010000023;XR_004388052;XR_004388053 ncrna 626085638 Dvl1 dishevelled segment polarity protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); enzyme binding (ortholog); frizzled binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH autosomal dominant Robinow syndrome 1 (ortholog); autosomal dominant Robinow syndrome 2 (ortholog); DiGeorge syndrome (ortholog); FOUND IN axon (ortholog); clathrin-coated vesicle (ortholog); cytoplasm (ortholog) 1 4770167 4782237 - 22301074;30032202 116891458 MODEL JAAIVD010000025;XM_032892540;XM_032892550;XM_032892560;XM_032892569;XM_032892577;XM_032892584 XP_032748431;XP_032748441;XP_032748451;XP_032748460;XP_032748468;XP_032748475 segment polarity protein dishevelled homolog DVL-1 protein-coding 626085677 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 1591424 1591506 + 116886801 MODEL JAAIVD010000011 trna 626085678 LOC116908965 olfactory receptor 1468-like 9 44660182 44661117 + 22301074;30032202 116908965 MODEL JAAIVD010000002;XM_032912426 XP_032768317 protein-coding 626085681 Rcbtb1 RCC1 and BTB domain containing protein 1 ASSOCIATED WITH Coats disease (ortholog); fundus dystrophy (ortholog); RETINAL DYSTROPHY WITH OR WITHOUT EXTRAOCULAR ANOMALIES (ortholog); FOUND IN cytoplasm (ortholog) 12 65040983 65080839 - 22301074 116913330 MODEL JAAIVD010000007;XM_032917476;XM_032917477;XM_032917478 XP_032773367;XP_032773368;XP_032773369 RCC1 and BTB domain-containing protein 1 protein-coding 626085705 LOC116902116 tubulin alpha-1A chain-like 1 105562832 105564108 + 116902116 MODEL JAAIVD010000025 pseudo 626085706 LOC116889591 ubiquitin-like modifier-activating enzyme 1 Y Y 1887197 1910453 - 30032202 116889591 MODEL JAAIVD010000015;XM_032890527 XP_032746418 protein-coding 626085736 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48633033 48633104 + 116910801 MODEL JAAIVD010000002 trna 626085737 Gabrr3 gamma-aminobutyric acid type A receptor subunit rho3 ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH restless legs syndrome (ortholog); FOUND IN GABA-ergic synapse (ortholog); postsynaptic membrane (ortholog) 4 43232628 43284988 + 22301074;30032202 116898917 MODEL JAAIVD010000003;XM_032900328 XP_032756219 gamma-aminobutyric acid receptor subunit rho-3 protein-coding 626085750 LOC116896067 zinc finger protein 180-like 3 209158135 209159314 + 116896067 MODEL JAAIVD010000012 pseudo 626085751 Pla2g4e phospholipase A2 group IVE ENCODES a protein that exhibits N-acyltransferase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN N-acylphosphatidylethanolamine metabolic process (ortholog); positive regulation of endocytic recycling (ortholog); FOUND IN cytoplasm (ortholog); early endosome membrane (ortholog); lysosomal membrane (ortholog) 5 98318490 98383630 - 22301074;30032202 116901829 MODEL JAAIVD010000023;XM_032903993 XP_032759884 cytosolic phospholipase A2 epsilon protein-coding 626085775 Dhx29 DExH-box helicase 29 ENCODES a protein that exhibits ribonucleoside triphosphate phosphatase activity (ortholog); ribosomal small subunit binding (ortholog); translation activator activity (ortholog); INVOLVED IN formation of translation preinitiation complex (ortholog); ribosome assembly (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosolic small ribosomal subunit (ortholog); eukaryotic 43S preinitiation complex (ortholog) 3 183813289 183866234 - 22301074;30032202 116897185 MODEL JAAIVD010000012;XM_032898874;XM_032898875;XM_032898876 XP_032754765;XP_032754766;XP_032754767 ATP-dependent RNA helicase DHX29 protein-coding 626085811 Ccdc180 coiled-coil domain containing 180 ASSOCIATED WITH pneumoconiosis (ortholog) 1 554155 620472 - 116885673 MODEL JAAIVD010000025;XM_032886983 XP_032742874 coiled-coil domain-containing protein 180 protein-coding 626085854 Sirt1 sirtuin 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); caspase binding (ortholog); deacetylase activity (ortholog); INVOLVED IN angiogenesis (ortholog); attachment of mitotic spindle microtubules to kinetochore (ortholog); behavioral response to starvation (ortholog); PARTICIPATES IN histone modification pathway; hypoxia inducible factor pathway; p53 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); chromatin (ortholog); chromatin silencing complex (ortholog) 18 23369139 23390562 + 22301074 116886942 MODEL JAAIVD010000013;XM_032888440 XP_032744331 NAD-dependent protein deacetylase sirtuin-1 protein-coding 626085867 B4galt4 beta-1,4-galactosyltransferase 4 ENCODES a protein that exhibits N-acetyllactosamine synthase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN keratan sulfate proteoglycan biosynthetic process (ortholog); lactosylceramide biosynthetic process (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 4 23680372 23699180 + 22301074;30032202 116898850 MODEL JAAIVD010000003;XM_032900204 XP_032756095 protein-coding 626085877 LOC116908448 U4 spliceosomal RNA 8 45445972 45446096 - 116908448 MODEL JAAIVD010000027 pseudo 626085878 Atp2c1 ATPase secretory pathway Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); calcium ion transport (ortholog); calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Hailey-Hailey disease (ortholog); FOUND IN cis-Golgi network membrane (ortholog); Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog) 8 96706747 96814438 - 22301074;30032202 116907450 MODEL JAAIVD010000027;XM_032910421;XM_032910422;XM_032910423;XM_032910424;XM_032910425;XM_032910426 XP_032766312;XP_032766313;XP_032766314;XP_032766315;XP_032766316;XP_032766317 calcium-transporting ATPase type 2C member 1 protein-coding 626085929 P3r3urf PIK3R3 upstream open reading frame 1 39855746 39874505 + 116898279 MODEL JAAIVD010000025;XM_032899634;XM_032899640 XP_032755525;XP_032755531 PIK3R3 upstream open reading frame protein;PIK3R3 upstream reading frame protein-coding 626085938 Alx4 ALX homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); digestive tract development (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH Adenomatous Polyps (ortholog); bronchiolo-alveolar adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 5 67814626 67850743 + 30032202 116901653 MODEL JAAIVD010000023;XM_032903763 XP_032759654 homeobox protein aristaless-like 4 protein-coding 626085946 Dpysl3 dihydropyrimidinase like 3 ENCODES a protein that exhibits chondroitin sulfate binding (ortholog); filamin binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cell body (ortholog); cytosol (ortholog); exocytic vesicle (ortholog) 15 1617667 1680326 + 22301074;30032202 116884916 MODEL JAAIVD010000010;XM_032886139 XP_032742030 dihydropyrimidinase-related protein 3 protein-coding 626085964 Dctd dCMP deaminase ENCODES a protein that exhibits 5-hydroxymethyl-dUMP N-hydrolase activity (ortholog); identical protein binding (ortholog); INVOLVED IN nucleoside salvage (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; gemcitabine pharmacodynamics pathway 13 39876028 39908096 - 22301074;30032202 116914831 MODEL JAAIVD010000008;XM_032919287;XM_032919288;XM_032919289 XP_032775178;XP_032775179;XP_032775180 deoxycytidylate deaminase protein-coding 626085979 LOC116884018 non-histone chromosomal protein HMG-14-like 14 32585541 32586480 - 116884018 MODEL JAAIVD010000009 pseudo 626085980 LOC116906277 la-related protein 4B-like 7 121582445 121584240 - 116906277 MODEL JAAIVD010000026 pseudo 626085981 LOC116906477 small nucleolar RNA SNORA17 7 123868744 123868827 + 116906477 MODEL JAAIVD010000026 pseudo 626085982 LOC116906169 nucleoporin GLE1-like 7 101864095 101871790 - 22301074;30032202 116906169 MODEL JAAIVD010000026;XM_032909146 XP_032765037 protein-coding 626085986 Ap5b1 adaptor related protein complex 5 subunit beta 1 INVOLVED IN endosomal transport (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); FOUND IN AP-type membrane coat adaptor complex (ortholog) 2 2102983 2106279 - 30032202 116890702 MODEL JAAIVD010000001;XM_032891132 XP_032747023 AP-5 complex subunit beta-1 protein-coding 626085993 LOC116906271 uncharacterized LOC116906271 7 127089536 127120478 + 116906271 MODEL JAAIVD010000026;XM_032909160 XP_032765051 uncharacterized protein LOC116906271 protein-coding 626086003 Cfdp1 craniofacial development protein 1 INVOLVED IN cell adhesion (ortholog); negative regulation of fibroblast apoptotic process (ortholog); regulation of cell population proliferation (ortholog) 17 31459553 31548303 - 116886708 MODEL JAAIVD010000011;XM_032888213 XP_032744104 protein-coding 626086014 Wdr27 WD repeat domain 27 FOUND IN nucleoplasm (ortholog) 14 1002450 1095363 + 22301074 116884009 MODEL JAAIVD010000009;XM_032885247 XP_032741138 WD repeat-containing protein 27 protein-coding 626086041 LOC116913867 inositol polyphosphate multikinase-like 12 5263292 5264701 - 116913867 MODEL JAAIVD010000007 pseudo 626086042 Znf282 zinc finger protein 282 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 6 92978586 93004959 - 22301074 116903874 MODEL JAAIVD010000024;XM_032906627 XP_032762518 protein-coding 626086054 LOC116906984 vomeronasal type-2 receptor 116-like 1 156567403 156607033 - 116906984 MODEL JAAIVD010000025 pseudo 626086055 Pold3 DNA polymerase delta 3, accessory subunit ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN DNA biosynthetic process (ortholog); DNA-templated DNA replication (ortholog); error-prone translesion synthesis (ortholog); PARTICIPATES IN mismatch repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); immunodeficiency 122 (ortholog); FOUND IN delta DNA polymerase complex (ortholog); nucleoplasm (ortholog); zeta DNA polymerase complex (ortholog) 2 98368054 98415663 - 22301074;30032202 116891733 MODEL JAAIVD010000001;XM_032893032;XM_032893033 XP_032748923;XP_032748924 DNA polymerase delta subunit 3 protein-coding 626086076 Scarf1 scavenger receptor class F member 1 ENCODES a protein that exhibits low-density lipoprotein particle binding (ortholog); scavenger receptor activity (ortholog); INVOLVED IN dendrite development (ortholog); neuron remodeling (ortholog); positive regulation of axon regeneration (ortholog); FOUND IN membrane (ortholog) 9 94228497 94241166 + 30032202 116909447 MODEL JAAIVD010000002;XM_032913025 XP_032768916 protein-coding 626086091 LOC116883822 60S ribosomal protein L9-like 14 60751877 60752798 - 116883822 MODEL JAAIVD010000009 pseudo 626086092 LOC116914923 ATP synthase subunit C lysine N-methyltransferase-like 13 3275268 3342834 - 116914923 MODEL JAAIVD010000008 pseudo 626086093 LOC116911459 60S ribosomal protein L36a-like 10 40200647 40200919 + 116911459 MODEL JAAIVD010000005 pseudo 626086094 Cobll1 cordon-bleu WH2 repeat protein like 1 ASSOCIATED WITH Cocaine-Related Disorders (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); Myocardial Reperfusion Injury (ortholog) 5 42576397 42645151 - 30032202 116900822 MODEL JAAIVD010000023;XM_032902529 XP_032758420 cordon-bleu protein-like 1 protein-coding 626086113 LOC116893074 metallothionein-1-like 2 42931025 42941176 + 22301074;30032202 116893074 MODEL JAAIVD010000001;XM_032895030 XP_032750921 protein-coding 626086118 Rsl24d1 ribosomal L24 domain containing 1 FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 8 67452733 67461931 + 22301074;30032202 116907448 MODEL JAAIVD010000027;XM_032910418 XP_032766309 probable ribosome biogenesis protein RLP24 protein-coding 626086128 C1qtnf12 C1q and TNF related 12 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); negative regulation of gluconeogenesis (ortholog); negative regulation of inflammatory response (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 1 4683841 4688584 - 30032202 116891615 MODEL JAAIVD010000025;XM_032892826;XM_032892834 XP_032748717;XP_032748725 adipolin protein-coding 626086143 LOC116892637 zinc finger and SCAN domain containing protein 4C-like 2 175166748 175181068 + 30032202 116892637 MODEL JAAIVD010000001;XM_032894457 XP_032750348 protein-coding 626086151 LOC116914102 small nucleolar RNA SNORA5 12 68164825 68164984 + 116914102 MODEL JAAIVD010000007;XR_004389670 snorna 626086154 LOC116894789 phospholipase A and acyltransferase 3 2 169279 185205 - 30032202 116894789 MODEL JAAIVD010000001;XM_032896439 XP_032752330 protein-coding 626086161 LOC116897534 small nucleolar RNA SNORA48 3 132824743 132824885 - 116897534 MODEL JAAIVD010000012;XR_004387549 snorna 626086164 Cip2a cellular inhibitor of PP2A ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein phosphatase inhibitor activity (ortholog); INVOLVED IN broken chromosome clustering (ortholog); chromosome organization (ortholog); DNA damage response (ortholog); FOUND IN centrosome (ortholog); chromosome (ortholog); ciliary basal body (ortholog) 4 33492499 33520007 + 116898886 MODEL JAAIVD010000003;XM_032900262 XP_032756153 protein CIP2A protein-coding 626086189 Tectb tectorin beta ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); FOUND IN extracellular matrix (ortholog) 2 60965956 60980972 - 30032202 116893846 MODEL JAAIVD010000001;XM_032895566 XP_032751457 beta-tectorin protein-coding 626086203 LOC116900463 uncharacterized LOC116900463 1 67144428 67146408 + 116900463 MODEL JAAIVD010000025;XR_004387931 ncrna 626086207 Mroh8 maestro heat like repeat family member 8 5 136555392 136624023 - 30032202 116902223 MODEL JAAIVD010000023;XM_032904628 XP_032760519 protein MROH8 protein-coding 626086235 Pierce1 piercer of microtubule wall 1 INVOLVED IN axoneme assembly (ortholog); cellular response to UV-C (ortholog); cilium movement (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); cytoplasm (ortholog) 5 8202543 8207379 + 22301074;30032202 116900067 MODEL JAAIVD010000023;XM_032901858 XP_032757749 C5H9orf116 UPF0691 protein C9orf116 homolog;chromosome 5 C9orf116 homolog protein-coding 626086242 LOC116900271 olfactory receptor 5M9 5 63322349 63323281 + 22301074;30032202 116900271 MODEL JAAIVD010000023;XM_032902023 XP_032757914 protein-coding 626086245 LOC116914972 ankyrin repeat domain-containing protein 7-like 13 19890543 19902142 + 116914972 MODEL JAAIVD010000008 pseudo 626086246 LOC116894734 replication protein A 14 kDa subunit-like 2 81592959 81593405 - 116894734 MODEL JAAIVD010000001 pseudo 626086247 LOC116913206 E3 ubiquitin-protein ligase RNF8-like 12 67974165 67975488 + 30032202 116913206 MODEL JAAIVD010000007;XM_032917390 XP_032773281 protein-coding 626086251 Cdip1 cell death inducing p53 target 1 INVOLVED IN intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); FOUND IN cytoplasmic side of late endosome membrane (ortholog); cytoplasmic side of lysosomal membrane (ortholog); nucleus (ortholog) 9 17121245 17124563 + 30032202 116910464 MODEL JAAIVD010000002;XM_032914334 XP_032770225 cell death-inducing p53-target protein 1 protein-coding 626086259 Kif20a kinesin family member 20A ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); midbody abscission (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH COVID-19 (ortholog); familial restrictive cardiomyopathy 6 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cleavage furrow (ortholog); intercellular bridge (ortholog); midbody (ortholog) 15 9721632 9729820 - 22301074;30032202 116884446 MODEL JAAIVD010000010;XM_032885541 XP_032741432 kinesin-like protein KIF20A protein-coding 626086282 LOC116885703 60S ribosomal protein L34-like 16 15459951 15460351 + 116885703 MODEL JAAIVD010000004 pseudo 626086283 Osr2 odd-skipped related transciption factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); cell differentiation (ortholog); chondrocyte differentiation (ortholog); ASSOCIATED WITH endometriosis (ortholog); FOUND IN nucleus (ortholog) 1 208885056 208892469 + 30032202 116910511 MODEL JAAIVD010000025;XM_032914414;XM_032914421 XP_032770305;XP_032770312 protein odd-skipped-related 2 protein-coding 626086294 Rnf139 ring finger protein 139 ENCODES a protein that exhibits protease binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of translation (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog) 1 233417250 233428420 + 22301074;30032202 116911824 MODEL JAAIVD010000025;XM_032915803;XM_032915804 XP_032771694;XP_032771695 E3 ubiquitin-protein ligase RNF139 protein-coding 626086303 LOC116905614 ribosome biogenesis protein NSA2 homolog 7 15021384 15042338 - 116905614 MODEL JAAIVD010000026 pseudo 626086304 LOC116898023 non-histone chromosomal protein HMG-14-like 4 79375645 79376907 - 116898023 MODEL JAAIVD010000003 pseudo 626086305 Sec62 SEC62 homolog, preprotein translocation factor INVOLVED IN post-translational protein targeting to endoplasmic reticulum membrane (ortholog); post-translational protein targeting to membrane, translocation (ortholog); FOUND IN membrane (ortholog) 3 125024482 125051008 + 22301074;30032202 116896977 MODEL JAAIVD010000012;XM_032898559;XM_032898560 XP_032754450;XP_032754451 translocation protein SEC62 protein-coding 626086323 Chmp2b charged multivesicular body protein 2B ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cognition (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); frontotemporal dementia (ortholog); frontotemporal dementia and/or amyotrophic lateral sclerosis 7 (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); cytoplasm (ortholog) 4 76805368 76830071 - 30032202 116899055 MODEL JAAIVD010000003;XM_032900526 XP_032756417 protein-coding 626086333 LOC116909026 T-cell-specific guanine nucleotide triphosphate-binding protein 2-like 9 40053341 40058018 - 22301074;30032202 116909026 MODEL JAAIVD010000002;XM_032912505 XP_032768396 protein-coding 626086339 Mtpn myotrophin ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); cerebellar granule cell differentiation (ortholog); positive regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 104154733 104184842 + 22301074;30032202 116903964 MODEL JAAIVD010000024;XM_032906759 XP_032762650 protein-coding 626086347 Odf2 outer dense fiber of sperm tails 2 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN centriole-centriole cohesion (ortholog); cilium organization (ortholog); intracellular protein localization (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) 5 6799727 6846064 - 30032202 116901207 MODEL JAAIVD010000023;XM_032902915;XM_032902916;XM_032902917;XM_032902918;XM_032902920;XM_032902921;XM_032902922;XM_032902923;XM_032902924;XM_032902925 XP_032758806;XP_032758807;XP_032758808;XP_032758809;XP_032758811;XP_032758812;XP_032758813;XP_032758814;XP_032758815;XP_032758816 outer dense fiber protein 2 protein-coding 626086394 LOC116888026 PRAME family member 20-like X 81946706 81948149 - 116888026 MODEL JAAIVD010000014 pseudo 626086395 LOC116905575 cytochrome c oxidase subunit 6C-like 7 101237506 101239178 - 116905575 MODEL JAAIVD010000026 pseudo 626086396 LOC116886298 preferentially expressed antigen in melanoma-like protein 7 1 14452565 14462477 - 22301074;30032202 116886298 MODEL JAAIVD010000025;XM_032887740 XP_032743631 protein-coding 626086402 Immt inner membrane mitochondrial protein INVOLVED IN cristae formation (ortholog); mitochondrial calcium ion homeostasis (ortholog); neuron cellular homeostasis (ortholog); PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); osteoarthritis (ortholog); FOUND IN MICOS complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 6 74865244 74900995 + 30032202 116903690 MODEL JAAIVD010000024;XM_032906360;XM_032906361 XP_032762251;XP_032762252 MICOS complex subunit MIC60 protein-coding 626086425 LOC116912979 small nucleolar RNA SNORA17 11 67592168 67592299 - 116912979 MODEL JAAIVD010000006;XR_004389544 snorna 626086428 LOC116895996 glyceraldehyde-3-phosphate dehydrogenase-like 3 167438978 167443565 - 116895996 MODEL JAAIVD010000012 pseudo 626086429 Tmem204 transmembrane protein 204 INVOLVED IN lymph vessel development (ortholog); regulation of vascular endothelial growth factor receptor signaling pathway (ortholog); smooth muscle cell differentiation (ortholog); FOUND IN plasma membrane (ortholog) 9 2325991 2351805 - 116910460 MODEL JAAIVD010000002;XM_032914330 XP_032770221 protein-coding 626086436 LOC116905900 uncharacterized LOC116905900 7 14351707 14356519 - 116905900 MODEL JAAIVD010000026;XR_004388574 ncrna 626086442 LOC116912094 gasdermin-D-like 1 238144153 238154720 + 30032202 116912094 MODEL JAAIVD010000025;XM_032915988 XP_032771879 protein-coding 626086458 Ttn titin ENCODES a protein that exhibits actin filament binding (ortholog); actinin binding (ortholog); ankyrin binding (ortholog); INVOLVED IN adult heart development (ortholog); cardiac muscle cell development (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); autosomal dominant centronuclear myopathy (ortholog); FOUND IN A band (ortholog); condensed nuclear chromosome (ortholog); I band (ortholog) 5 54055412 54324229 - 22301074 116901550 MODEL JAAIVD010000023;XM_032903537;XM_032903538;XM_032903539;XM_032903540;XM_032903541 XP_032759428;XP_032759429;XP_032759430;XP_032759431;XP_032759432 protein-coding 626086791 Ncapg2 non-SMC condensin II complex subunit G2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); histone H4K20me1 reader activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); inner cell mass cell proliferation (ortholog); positive regulation of chromosome segregation (ortholog); ASSOCIATED WITH Kahn-Kahn-Katsanis Syndrome (ortholog); Parkinson's disease (ortholog); FOUND IN condensed nuclear chromosome (ortholog); condensin complex (ortholog); nuclear speck (ortholog) 7 119595215 119666092 - 22301074;30032202 116905401 MODEL JAAIVD010000026;XM_032908353;XM_032908354;XM_032908355;XM_032908357;XR_004388523 XP_032764244;XP_032764245;XP_032764246;XP_032764248 condensin-2 complex subunit G2 protein-coding 626086835 Asph aspartate beta-hydroxylase ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN activation of store-operated calcium channel activity (ortholog); calcium ion homeostasis (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); cholangiocarcinoma (ortholog); Ectopia Lentis, Spontaneous Filtering Blebs, and Craniofacial Dysmorphism (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 1 133858356 133918285 + 22301074;30032202 116903492 MODEL JAAIVD010000025;XM_032906075;XM_032906085;XM_032906094 XP_032761966;XP_032761976;XP_032761985 aspartyl/asparaginyl beta-hydroxylase protein-coding 626086853 Dnah6 dynein axonemal heavy chain 6 ASSOCIATED WITH Huntington's disease (ortholog); primary ciliary dyskinesia 45 (ortholog); primary ovarian insufficiency (ortholog) 6 73450319 73646391 - 22301074;30032202 116903672 MODEL JAAIVD010000024;XM_032906333 XP_032762224 dynein heavy chain 6, axonemal protein-coding 626086934 LOC116914133 small nucleolar RNA SNORA17 12 78908252 78908383 - 116914133 MODEL JAAIVD010000007;XR_004389694 snorna 626086937 LOC116887690 rho GTPase-activating protein 20-like 18 23948801 23963301 - 22301074;30032202 116887690 MODEL JAAIVD010000013;XM_032889284;XM_032889285;XR_004386230 XP_032745175;XP_032745176 T-cell activation Rho GTPase-activating protein-like protein-coding 626086955 Aplp2 amyloid beta precursor like protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cholesterol metabolic process (ortholog); extracellular matrix organization (ortholog); forebrain development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Myocardial Ischemia (ortholog); Nerve Degeneration (ortholog); FOUND IN nucleus (ortholog); spine apparatus (ortholog) 8 26882316 26943478 - 22301074;30032202 116907940 MODEL JAAIVD010000027;XM_032911157;XM_032911158;XM_032911159;XM_032911161 XP_032767048;XP_032767049;XP_032767050;XP_032767052 amyloid-like protein 2 protein-coding 626086984 Sobp sine oculis binding protein homolog ENCODES a protein that exhibits SUMO polymer binding (ortholog); INVOLVED IN cochlea development (ortholog); cognition (ortholog); inner ear morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Impaired intellectual development, anterior maxillary protrusion, and strabismus (ortholog); FOUND IN nucleus (ortholog) 18 42707879 42883917 - 30032202 116887290 MODEL JAAIVD010000013;XM_032888869;XM_032888871 XP_032744760;XP_032744762 sine oculis-binding protein homolog protein-coding 626086997 Figla folliculogenesis specific bHLH transcription factor ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN transcription regulator complex (ortholog) 6 60314551 60318392 - 22301074;30032202 116903061 MODEL JAAIVD010000024;XM_032905358 XP_032761249 factor in the germline alpha protein-coding 626087002 LOC116915000 heat shock cognate 71 kDa protein-like 13 29780836 29781571 - 116915000 MODEL JAAIVD010000008 pseudo 626087003 Ttc33 tetratricopeptide repeat domain 33 3 175101603 175139413 - 22301074 116897151 MODEL JAAIVD010000012;XM_032898819 XP_032754710 tetratricopeptide repeat protein 33 protein-coding 626087012 LOC116906471 small nucleolar RNA SNORA17 7 41165690 41165833 + 116906471 MODEL JAAIVD010000026 pseudo 626087013 Slc68a1 solute carrier family 68 member 1 FOUND IN plasma membrane (ortholog) 2 45816948 45835310 + 116891246 MODEL JAAIVD010000001;XM_032892121;XM_032892123 XP_032748012;XP_032748014 Mfsd13a major facilitator superfamily domain containing 13A;transmembrane protein 180 protein-coding 626087029 Heatr4 HEAT repeat containing 4 ASSOCIATED WITH COVID-19 (ortholog) 7 98029939 98060165 - 22301074;30032202 116905255 MODEL JAAIVD010000026;XM_032908106;XR_004388505 XP_032763997 HEAT repeat-containing protein 4 protein-coding 626087050 Dmrta2 DMRT like family A2 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); dopaminergic neuron differentiation (ortholog); neuron fate specification (ortholog); FOUND IN nucleus (ortholog) 1 42677040 42682810 + 22301074;30032202 116887436 MODEL JAAIVD010000025;XM_032889053 XP_032744944 doublesex- and mab-3-related transcription factor A2 protein-coding 626087057 Ckap2l cytoskeleton associated protein 2 like ASSOCIATED WITH Filippi syndrome (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytosol (ortholog) 5 108032784 108056521 - 30032202 116901958 MODEL JAAIVD010000023;XM_032904197 XP_032760088 cytoskeleton-associated protein 2-like protein-coding 626087070 Nkx2-1 NK2 homeobox 1 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); animal organ morphogenesis (ortholog); axon guidance (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Benign Familial Chorea (ortholog); Brain-Lung-Thyroid Syndrome (ortholog); choreatic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 7 69876894 69880967 - 22301074;30032202 116905714 MODEL JAAIVD010000026;XM_032908685;XM_032908686 XP_032764576;XP_032764577 homeobox protein Nkx-2.1 protein-coding 626087079 LOC116894636 serine/Arginine-related protein 53-like 2 195735783 195736801 + 30032202 116894636 MODEL JAAIVD010000001;XM_032896351 XP_032752242 protein-coding 626087084 LOC116900704 cytochrome c oxidase subunit 4 isoform 2, mitochondrial INVOLVED IN cellular response to hypoxia (ortholog); mitochondrial electron transport, cytochrome c to oxygen (ortholog); ASSOCIATED WITH Exocrine Pancreatic Insufficiency, Dyserythropoietic Anemia, and Calvarial Hyperostosis (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 5 132082200 132094404 + 22301074;30032202 116900704 MODEL JAAIVD010000023;XM_032902407 XP_032758298 protein-coding 626087093 Cnpy3 canopy FGF signaling regulator 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 60 (ortholog) 4 83116638 83132099 + 30032202 116899097 MODEL JAAIVD010000003;XM_032900606 XP_032756497 protein canopy homolog 3 protein-coding 626087103 LOC116906447 small nucleolar RNA SNORA17 7 5524659 5524792 + 116906447 MODEL JAAIVD010000026;XR_004388706 snorna 626087106 LOC116893795 ADAMTS-like protein 1 1 67829095 67972883 - 30032202 116893795 MODEL JAAIVD010000025;XM_032895535 XP_032751426 protein-coding 626087125 Vezt vezatin, adherens junctions transmembrane protein INVOLVED IN cell-cell adhesion (ortholog); chordate embryonic development (ortholog); synapse maturation (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 1 173067264 173130235 - 22301074;30032202 116908289 MODEL JAAIVD010000025;XM_032911553;XM_032911561 XP_032767444;XP_032767452 vezatin protein-coding 626087144 LOC116886175 40S ribosomal protein S25-like 17 44553652 44561215 - 116886175 MODEL JAAIVD010000011 pseudo 626087145 Sox9 SRY-box transcription factor 9 ENCODES a protein that exhibits beta-catenin binding (ortholog); bHLH transcription factor binding (ortholog); chromatin binding (ortholog); INVOLVED IN anterior head development (ortholog); aortic valve morphogenesis (ortholog); astrocyte fate commitment (ortholog); ASSOCIATED WITH 46,XX sex reversal 2 (ortholog); 46,XY sex reversal 10 (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 9 76531235 76535398 - 30032202 116909610 MODEL JAAIVD010000002;XM_032913232 XP_032769123 transcription factor SOX-9 protein-coding 626087152 LOC116905716 ras GTPase-activating protein-binding protein 1-like 7 71971949 71973671 + 116905716 MODEL JAAIVD010000026 pseudo 626087153 LOC116891211 acyl-CoA desaturase 1 2 43917316 43928297 - 30032202 116891211 MODEL JAAIVD010000001;XM_032892045;XM_032892046 XP_032747936;XP_032747937 protein-coding 626087167 Amph amphiphysin ENCODES a protein that exhibits phosphatase binding (ortholog); phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN learning (ortholog); positive regulation of endocytosis (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN axon terminus (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) 14 37782731 37978540 + 22301074;30032202 116883537 MODEL JAAIVD010000009;XM_032884708 XP_032740599 protein-coding 626087192 Cd207 CD207 molecule ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN defense response to virus (ortholog) 6 62571234 62576992 + 30032202 116904325 MODEL JAAIVD010000024;XM_032907233 XP_032763124 C-type lectin domain family 4 member K protein-coding 626087201 Dus1l dihydrouridine synthase 1 like ENCODES a protein that exhibits tRNA-dihydrouridine16 synthase activity (ortholog); tRNA-dihydrouridine17 synthase activity (ortholog); INVOLVED IN tRNA dihydrouridine synthesis (ortholog); ASSOCIATED WITH epilepsy (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 63236498 63243625 + 22301074;30032202 116909836 MODEL JAAIVD010000002;XM_032913557;XM_032913558 XP_032769448;XP_032769449 tRNA-dihydrouridine(16/17) synthase [NAD(P)(+)]-like protein-coding 626087223 Chd5 chromodomain helicase DNA binding protein 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cerebral cortex neuron differentiation (ortholog); chromatin remodeling (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); heterochromatin (ortholog) 1 8355786 8402236 - 22301074;30032202 116892223 MODEL JAAIVD010000025;XM_032893791;XM_032893799;XM_032893808;XM_032893812;XM_032893819;XM_032893828 XP_032749682;XP_032749690;XP_032749699;XP_032749703;XP_032749710;XP_032749719 chromodomain-helicase-DNA-binding protein 5 protein-coding 626087282 LOC116890473 small nucleolar RNA SNORA44 1 25939505 25939633 - 116890473 MODEL JAAIVD010000025;XR_004386662 snorna 626087285 Asb11 ankyrin repeat and SOCS box containing 11 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); endoplasmic reticulum (ortholog) X 25013832 25037540 + 22301074;30032202 116888572 MODEL JAAIVD010000014;XM_032889875;XM_032889876 XP_032745766;XP_032745767 ankyrin repeat and SOCS box protein 11 protein-coding 626087299 LOC116894922 small nucleolar RNA SNORD29 2 9215783 9215846 - 116894922 MODEL JAAIVD010000001;XR_004387121 snorna 626087302 C1s complement C1s ENCODES a protein that exhibits identical protein binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); complement activation (ortholog); complement activation, classical pathway (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); autoimmune hepatitis (ortholog); Complement Component C1s Deficiency (ortholog); FOUND IN complement component C1 complex (ortholog); extracellular region (ortholog); symbiont cell surface (ortholog) 6 23245815 23257820 + 22301074;30032202 116903289 MODEL JAAIVD010000024;XM_032905711 XP_032761602 complement C1s subcomponent protein-coding 626087318 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 83350704 83350777 + 116910815 MODEL JAAIVD010000002 trna 626087319 LOC116888525 thioredoxin domain-containing protein 8 1 93564020 93587514 + 116888525 MODEL JAAIVD010000025;XM_032889825 XP_032745716 protein-coding 626087329 Dnajb14 DnaJ heat shock protein family (Hsp40) member B14 ENCODES a protein that exhibits Hsp70 protein binding (ortholog); INVOLVED IN protein folding (ortholog); protein-containing complex assembly (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 21263318 21307760 - 30032202 116896215 MODEL JAAIVD010000012;XM_032897270 XP_032753161 dnaJ homolog subfamily B member 14 protein-coding 626087341 Epb41l4b erythrocyte membrane protein band 4.1 like 4B INVOLVED IN actomyosin structure organization (ortholog); positive regulation of cell adhesion (ortholog); positive regulation of gene expression (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 94472586 94627710 + 22301074 116901667 MODEL JAAIVD010000025;XM_032903782 XP_032759673 band 4.1-like protein 4B protein-coding 626087371 Rbm33 RNA binding motif protein 33 ENCODES a protein that exhibits lncRNA binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN mRNA destabilization (ortholog); regulation of mRNA stability (ortholog); RNA export from nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 157114615 157221860 + 22301074;30032202 116904237 MODEL JAAIVD010000024;XM_032907180;XM_032907181;XM_032907182;XM_032907183;XM_032907185;XM_032907186 XP_032763071;XP_032763072;XP_032763073;XP_032763074;XP_032763076;XP_032763077 RNA-binding protein 33 protein-coding 626087407 Dab1 DAB adaptor protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN adult walking behavior (ortholog); cell-cell adhesion involved in neuronal-glial interactions involved in cerebral cortex radial glia guided migration (ortholog); central nervous system neuron differentiation (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Peters anomaly (ortholog); spastic ataxia (ortholog); FOUND IN apical part of cell (ortholog); brush border (ortholog); cytoplasm (ortholog) 1 49864429 50241662 - 30032202 116899460 MODEL JAAIVD010000025;XM_032901248;XM_032901259;XM_032901266;XM_032901277;XM_032901288;XM_032901296 XP_032757139;XP_032757150;XP_032757157;XP_032757168;XP_032757179;XP_032757187 disabled homolog 1 protein-coding 626087448 LOC116890522 small nucleolar RNA SNORA17 1 98423532 98423668 + 116890522 MODEL JAAIVD010000025;XR_004386704 snorna 626087451 LOC116890455 small nucleolar RNA SNORA68 1 91904664 91904792 + 116890455 MODEL JAAIVD010000025;XR_004386647 snorna 626087454 Pld6 phospholipase D family member 6 ENCODES a protein that exhibits cardiolipin hydrolase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); mitochondrial fusion (ortholog); P granule organization (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 3 172563252 172564924 - 30032202 116895184 MODEL JAAIVD010000012;XM_032896533 XP_032752424 mitochondrial cardiolipin hydrolase protein-coding 626087459 LOC116900565 olfactory receptor 4F3/4F16/4F29-like 5 90205618 90206556 - 22301074 116900565 MODEL JAAIVD010000023;XM_032902290 XP_032758181 protein-coding 626087462 Ndufb10 NADH:ubiquinone oxidoreductase subunit B10 ASSOCIATED WITH mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 35 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 9 2008280 2010350 - 116909984 MODEL JAAIVD010000002;XM_032913767 XP_032769658 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10 protein-coding 626087470 LOC116893832 40S ribosomal protein S9-like 2 56527268 56527859 + 116893832 MODEL JAAIVD010000001 pseudo 626087471 Impa1 inositol monophosphatase 1 ENCODES a protein that exhibits identical protein binding (ortholog); inositol monophosphate 1-phosphatase activity (ortholog); inositol monophosphate phosphatase activity (ortholog); INVOLVED IN phosphate-containing compound metabolic process (ortholog); phosphatidylinositol biosynthetic process (ortholog); signal transduction (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 59 (ortholog); intellectual disability (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 3 144359473 144381208 - 22301074;30032202 116897036 MODEL JAAIVD010000012;XM_032898657 XP_032754548 protein-coding 626087484 LOC116895049 small nucleolar RNA SNORA17 2 206407014 206407145 - 116895049 MODEL JAAIVD010000001;XR_004387232 snorna 626087487 Nol7 nucleolar protein 7 INVOLVED IN maturation of SSU-rRNA (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 14 62405886 62409253 + 22301074;30032202 116883639 MODEL JAAIVD010000009;XM_032884828 XP_032740719 protein-coding 626087499 LOC116884133 U6 spliceosomal RNA 14 42059594 42059694 + 116884133 MODEL JAAIVD010000009 pseudo 626087500 LOC116904022 potassium voltage-gated channel subfamily B member 2-like 1 149744842 149750003 + 22301074;30032202 116904022 MODEL JAAIVD010000025;XM_032906854;XM_032906862 XP_032762745;XP_032762753 protein-coding 626087508 LOC116905879 serine protease inhibitor A3B-like 7 115246467 115252190 - 30032202 116905879 MODEL JAAIVD010000026;XM_032908868 XP_032764759 protein-coding 626087514 Harbi1 harbinger transposase derived 1 FOUND IN centriolar satellite (ortholog); cytosol (ortholog); plasma membrane (ortholog) 5 65854902 65864007 + 116901629 MODEL JAAIVD010000023;XM_032903705 XP_032759596 putative nuclease HARBI1 protein-coding 626087521 LOC116897457 U6 spliceosomal RNA 3 21259504 21259605 + 116897457 MODEL JAAIVD010000012;XR_004387488 snrna 626087524 LOC116892804 sperm motility kinase 3A-like 2 186459318 186467533 - 22301074;30032202 116892804 MODEL JAAIVD010000001;XM_032894678;XM_032894679 XP_032750569;XP_032750570 protein-coding 626087534 LOC116911632 eukaryotic translation initiation factor 3 subunit M-like 10 33518054 33519611 - 116911632 MODEL JAAIVD010000005 pseudo 626087535 Actr3 actin related protein 3 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); ATPase binding (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); astrocyte differentiation (ortholog); asymmetric cell division (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; platelet-derived growth factor signaling pathway; Rab family mediated signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Cognitive Dysfunction (ortholog); colorectal carcinoma (ortholog); FOUND IN actin filament (ortholog); apical ectoplasmic specialization (ortholog); apical tubulobulbar complex (ortholog) 10 9260423 9303199 - 30032202 116910859 MODEL JAAIVD010000005;XM_032914620 XP_032770511 actin-related protein 3 protein-coding 626087551 Kcne1 potassium voltage-gated channel subfamily E regulatory subunit 1 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cardiac muscle cell action potential involved in contraction (ortholog); cellular response to acidic pH (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); plasma membrane (ortholog) 4 52262029 52272265 + 22301074;30032202 116897973 MODEL JAAIVD010000003;XM_032899375;XM_032899376 XP_032755266;XP_032755267 potassium voltage-gated channel subfamily E member 1 protein-coding 626087560 LOC116911893 U6 spliceosomal RNA 10 27972537 27972634 + 116911893 MODEL JAAIVD010000005 pseudo 626087561 LOC116893731 olfactory receptor 9I1-like 2 13883187 13884134 - 22301074;30032202 116893731 MODEL JAAIVD010000001;XM_032895446 XP_032751337 protein-coding 626087564 C12H8orf74 chromosome 12 C8orf74 homolog 12 60417957 60434815 + 116914077 MODEL JAAIVD010000007;XM_032918384 XP_032774275 uncharacterized protein C8orf74 homolog protein-coding 626087572 LOC116902895 60S ribosomal protein L38-like 6 104416400 104416613 - 116902895 MODEL JAAIVD010000024 pseudo 626087573 LOC116910949 solute carrier family 25 member 36-like 10 80428278 80434160 + 116910949 MODEL JAAIVD010000005 pseudo 626087574 Alg11 ALG11 alpha-1,2-mannosyltransferase ENCODES a protein that exhibits GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ip (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 64353846 64362280 - 22301074;30032202 116914418 MODEL JAAIVD010000008;XM_032918682;XM_032918683;XM_032918684;XM_032918685 XP_032774573;XP_032774574;XP_032774575;XP_032774576 GDP-Man:Man(3)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase protein-coding 626087591 LOC116890442 small nucleolar RNA SNORA70 1 246121756 246121881 + 116890442 MODEL JAAIVD010000025 pseudo 626087592 Cd86 CD86 molecule ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN B cell activation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); adult T-cell leukemia/lymphoma (ortholog); FOUND IN cell surface (ortholog); centriolar satellite (ortholog); external side of plasma membrane (ortholog) 4 21469526 21512850 - 30032202 116898823 MODEL JAAIVD010000003;XM_032900176 XP_032756067 T-lymphocyte activation antigen CD86 protein-coding 626087603 Aplnr apelin receptor ENCODES a protein that exhibits apelin receptor activity (ortholog); G protein-coupled peptide receptor activity (ortholog); mechanoreceptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult heart development (ortholog); aorta development (ortholog); PARTICIPATES IN apelin signaling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog) 5 62501270 62502753 + 22301074;30032202 116900233 MODEL JAAIVD010000023;XM_032901984 XP_032757875 protein-coding 626087608 LOC116898035 uncharacterized LOC116898035 4 81759458 81773325 + 116898035 MODEL JAAIVD010000003;XM_032899427 XP_032755318 uncharacterized protein LOC116898035 protein-coding 626087615 Cth cystathionine gamma-lyase ENCODES a protein that exhibits cystathionine gamma-lyase activity (ortholog); identical protein binding (ortholog); L-cystine L-cysteine-lyase (deaminating) (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cysteine biosynthetic process (ortholog); cysteine biosynthetic process via cystathionine (ortholog); PARTICIPATES IN cystathioninuria pathway; cysteine metabolic pathway; dihydropyrimidine dehydrogenase deficiency pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cataract (ortholog); cystathioninuria (ortholog) 3 3650880 3676997 + 22301074;30032202 116896129 MODEL JAAIVD010000012;XM_032897112 XP_032753003 protein-coding 626087631 LOC116899689 tubulin alpha-1 chain-like 4 173314991 173319394 - 116899689 MODEL JAAIVD010000003 pseudo 626087632 Rps16 ribosomal protein S16 ENCODES a protein that exhibits RNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); liver regeneration (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 2 167640506 167643115 - 22301074;2332055;30032202 116892397 MODEL JAAIVD010000001;X17665;XM_032894068;XM_032894069 CAA35662;XP_032749959;XP_032749960 40S ribosomal protein S16 protein-coding 626087644 LOC116885285 nuclear envelope pore membrane protein POM 121 16 18619070 18636325 + 30032202 116885285 MODEL JAAIVD010000004;XM_032886532 XP_032742423 protein-coding 626087661 LOC116890944 multifunctional methyltransferase subunit TRM112-like protein 2 9631226 9631810 - 30032202 116890944 MODEL JAAIVD010000001;XM_032891587 XP_032747478 protein-coding 626087666 Htr1b 5-hydroxytryptamine receptor 1B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); bone remodeling (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amphetamine abuse (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 8 75877269 75879465 - 1836757;22301074;30032202 116907907 MODEL JAAIVD010000027;X62944;XM_032911107 CAA44716;XP_032766998 protein-coding 626087671 Sh3gl1 SH3 domain containing GRB2 like 1, endophilin A2 ENCODES a protein that exhibits beta-1 adrenergic receptor binding (ortholog); GTPase binding (ortholog); identical protein binding (ortholog); INVOLVED IN modulation of excitatory postsynaptic potential (ortholog); positive regulation of synaptic vesicle endocytosis (ortholog); regulation of synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); high grade glioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 4 87402669 87429963 - 22301074;30032202 116899165 MODEL JAAIVD010000003;XM_032900730;XM_032900731 XP_032756621;XP_032756622 endophilin-A2 protein-coding 626087691 LOC116910412 snurportin-1-like 9 73238892 73240198 - 116910412 MODEL JAAIVD010000002 pseudo 626087692 LOC116889595 ATP-dependent RNA helicase DDX3Y-like Y 2022191 2042750 + 22301074;30032202 116889595 MODEL JAAIVD010000015;XM_032890530 XP_032746421 protein-coding 626087713 LOC116892066 probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial 2 149276167 149278755 - 22301074;30032202 116892066 MODEL JAAIVD010000001;XM_032893538 XP_032749429 protein-coding 626087718 Scg2 secretogranin II ENCODES a protein that exhibits chemoattractant activity (ortholog); cytokine activity (ortholog); INVOLVED IN angiogenesis (ortholog); eosinophil chemotaxis (ortholog); induction of positive chemotaxis (ortholog); FOUND IN dense core granule (ortholog); extracellular space (ortholog); neuronal dense core vesicle (ortholog) 4 152528718 152534192 - 22301074 116899547 MODEL JAAIVD010000003;XM_032901439;XM_032901440;XM_032901441 XP_032757330;XP_032757331;XP_032757332 secretogranin-2 protein-coding 626087730 Txndc12 thioredoxin domain containing 12 ENCODES a protein that exhibits protein-disulfide reductase (glutathione) activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 1 45993318 46019139 - 30032202 116899056 MODEL JAAIVD010000025;XM_032900529 XP_032756420 thioredoxin domain-containing protein 12 protein-coding 626087742 LOC116906175 protein arginine N-methyltransferase 1-like 7 106571822 106572872 - 116906175 MODEL JAAIVD010000026 pseudo 626087743 LOC116900609 olfactory receptor 6C6-like 5 102166208 102168925 - 22301074;30032202 116900609 MODEL JAAIVD010000023;XM_032902326 XP_032758217 protein-coding 626087748 Ablim1 actin binding LIM protein 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN axon guidance (ortholog); cilium assembly (ortholog); lamellipodium assembly (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); lamellipodium (ortholog); postsynaptic density (ortholog) 2 58987249 59129211 + 22301074;30032202 116891326 MODEL JAAIVD010000001;XM_032892250;XM_032892251;XM_032892252;XM_032892253;XM_032892254;XM_032892255;XM_032892256;XM_032892257 XP_032748141;XP_032748142;XP_032748143;XP_032748144;XP_032748145;XP_032748146;XP_032748147;XP_032748148 actin-binding LIM protein 1 protein-coding 626087785 LOC116913212 chymase-like 12 68952408 68954004 - 116913212 MODEL JAAIVD010000007 pseudo 626087786 LOC116911316 60S ribosomal protein L4-like 10 79176536 79177562 + 116911316 MODEL JAAIVD010000005 pseudo 626087787 Exosc4 exosome component 4 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); RNA exonuclease activity (ortholog); INVOLVED IN defense response to virus (ortholog); DNA deamination (ortholog); histone mRNA catabolic process (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); euchromatin (ortholog) 1 248659643 248662140 + 30032202 116913086 MODEL JAAIVD010000025;XM_032917222 XP_032773113 exosome complex component RRP41 protein-coding 626087794 LOC116909205 uncharacterized LOC116909205 9 87733292 87734404 + 116909205 MODEL JAAIVD010000002;XR_004389058 ncrna 626087798 Wdr93 WD repeat domain 93 ASSOCIATED WITH autism spectrum disorder (ortholog) 2 120457530 120495805 - 22301074;30032202 116894274 MODEL JAAIVD010000001;XM_032895986 XP_032751877 WD repeat-containing protein 93 protein-coding 626087819 Slc9a1 solute carrier family 9 member A1 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); identical protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cardiac muscle cell contraction (ortholog); cardiac muscle cell differentiation (ortholog); cell differentiation (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 19 (ortholog); Barrett's esophagus (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cation-transporting ATPase complex (ortholog) 1 24822896 24875908 - 22301074;30032202 116895220 MODEL JAAIVD010000025;XM_032896551 XP_032752442 sodium/hydrogen exchanger 1 protein-coding 626087835 Vegfc vascular endothelial growth factor C ENCODES a protein that exhibits chemoattractant activity (ortholog); vascular endothelial growth factor receptor 3 binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ morphogenesis (ortholog); cellular response to leukemia inhibitory factor (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); atherosclerosis (ortholog); breast carcinoma (ortholog); FOUND IN extracellular space (ortholog) 2 123762728 123877484 + 22301074;30032202 116891960 MODEL JAAIVD010000001;XM_032893403 XP_032749294 protein-coding 626087846 Cdr2 cerebellar degeneration related protein 2 FOUND IN cytoplasm (ortholog) 2 80817971 80842598 + 116891575 MODEL JAAIVD010000001;XM_032892754 XP_032748645 cerebellar degeneration-related protein 2 protein-coding 626087855 Stxbp5l syntaxin binding protein 5L ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); negative regulation of insulin secretion (ortholog); positive regulation of protein secretion (ortholog); FOUND IN neuromuscular junction (ortholog); neuronal dense core vesicle (ortholog); plasma membrane (ortholog) 4 22038845 22210550 + 30032202 116897977 MODEL JAAIVD010000003;XM_032899379 XP_032755270 syntaxin binding protein 5 like;syntaxin-binding protein 5-like protein-coding 626087881 LOC116891224 uncharacterized LOC116891224 2 44814180 44815219 - 116891224 MODEL JAAIVD010000001;XR_004386822 ncrna 626087886 LOC116910686 small nucleolar RNA SNORA19 9 38105401 38105515 + 116910686 MODEL JAAIVD010000002 pseudo 626087887 Xaf1 XIAP associated factor 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); INVOLVED IN negative regulation of protein-containing complex assembly (ortholog); negative regulation of type I interferon production (ortholog); positive regulation of type I interferon production (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 9 43208436 43219933 - 22301074 116910082 MODEL JAAIVD010000002;XM_032913898 XP_032769789 XIAP-associated factor 1 protein-coding 626087896 LOC116888378 5-aminolevulinate synthase, erythroid-specific, mitochondrial-like X 20037861 20061087 - 22301074;30032202 116888378 MODEL JAAIVD010000014;XM_032889656 XP_032745547 protein-coding 626087911 Xpnpep1 X-prolyl aminopeptidase 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); CARD8 inflammasome complex assembly (ortholog); negative regulation of programmed cell death (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 52427441 52477062 - 22301074 116891280 MODEL JAAIVD010000001;XM_032892184;XM_032892185 XP_032748075;XP_032748076 xaa-Pro aminopeptidase 1 protein-coding 626087939 LOC116903480 uncharacterized LOC116903480 6 51455830 51476237 + 116903480 MODEL JAAIVD010000024;XR_004388279 ncrna 626087943 LOC116896033 egl nine homolog 1-like 3 188794972 188796446 + 116896033 MODEL JAAIVD010000012 pseudo 626087944 Diablo diablo IAP-binding mitochondrial protein INVOLVED IN apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway in response to oxidative stress (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 64 (ortholog); brain ischemia (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 16 30322806 30335560 + 22301074;30032202 116885461 MODEL JAAIVD010000004;XM_032886743 XP_032742634 diablo homolog, mitochondrial protein-coding 626087954 Dgkh diacylglycerol kinase eta ENCODES a protein that exhibits ATP-dependent diacylglycerol kinase activity (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN diacylglycerol metabolic process (ortholog); lipid phosphorylation (ortholog); phosphatidic acid biosynthetic process (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); endosome (ortholog) 12 45570240 45724676 + 22301074;30032202 116913607 MODEL JAAIVD010000007;XM_032917856;XM_032917857;XM_032917859 XP_032773747;XP_032773748;XP_032773750 protein-coding 626087995 Phex phosphate regulating endopeptidase X-linked INVOLVED IN bone development (ortholog); bone mineralization (ortholog); cellular response to parathyroid hormone stimulus (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Experimental Colitis (ortholog); Familial Hypophosphatemic Rickets (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) X 34913651 35115715 - 22301074;30032202 116889115 MODEL JAAIVD010000014;XM_032890280 XP_032746171 phosphate regulating endopeptidase homolog X-linked;phosphate-regulating neutral endopeptidase PHEX protein-coding 626088023 Plk3 polo like kinase 3 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); COVID-19 (ortholog); ovary epithelial cancer (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 1 40754206 40759422 - 22301074;30032202 116898614 MODEL JAAIVD010000025;XM_032899819 XP_032755710 serine/threonine-protein kinase PLK3 protein-coding 626088042 LOC116900880 olfactory receptor 5D18-like 5 69604017 69604982 + 22301074;30032202 116900880 MODEL JAAIVD010000023;XM_032902558 XP_032758449 protein-coding 626088045 LOC116883904 ubiquitin-40S ribosomal protein S27a-like 14 51760943 51761422 + 116883904 MODEL JAAIVD010000009 pseudo 626088046 Slc39a9 solute carrier family 39 member 9 ENCODES a protein that exhibits androgen binding (ortholog); G protein-coupled receptor activity (ortholog); zinc efflux transmembrane transporter activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); intracellular zinc ion homeostasis (ortholog); regulation of cellular response to testosterone stimulus (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog); nucleus (ortholog) 7 94857563 94895675 + 22301074;30032202 116905226 MODEL JAAIVD010000026;XM_032908039;XM_032908040 XP_032763930;XP_032763931 zinc transporter ZIP9 protein-coding 626088061 LOC116885519 60 kDa heat shock protein, mitochondrial-like 1 140372792 140381659 + 116885519 MODEL JAAIVD010000025 pseudo 626088062 Cd53 CD53 molecule ENCODES a protein that exhibits identical protein binding (ortholog); protein-membrane adaptor activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); positive regulation of myoblast fusion (ortholog); receptor clustering (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); immunological synapse (ortholog) 3 51318031 51461652 + 22301074;30032202 116896397 MODEL JAAIVD010000012;XM_032897534;XM_032897535 XP_032753425;XP_032753426 leukocyte surface antigen CD53 protein-coding 626088079 LOC116884423 mitochondrial import inner membrane translocase subunit Tim23-like 15 77936686 77999051 + 116884423 MODEL JAAIVD010000010 pseudo 626088080 C13H10orf53 chromosome 13 C10orf53 homolog 13 8094040 8104585 - 116914775 MODEL JAAIVD010000008;XM_032919222 XP_032775113 UPF0728 protein C10orf53 homolog protein-coding 626088087 Kif1a kinesin family member 1A ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); plus-end-directed microtubule motor activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde dendritic transport (ortholog); anterograde neuronal dense core vesicle transport (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); autistic disorder (ortholog); autosomal dominant intellectual developmental disorder (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 4 164956198 165040765 - 22301074 116899655 MODEL JAAIVD010000003;XM_032901664;XM_032901665 XP_032757555;XP_032757556 kinesin-like protein KIF1A protein-coding 626088146 Cd79a CD79a molecule ENCODES a protein that exhibits identical protein binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell activation (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH agammaglobulinemia (ortholog); agammaglobulinemia 1 (ortholog); agammaglobulinemia 3 (ortholog); FOUND IN B cell receptor complex (ortholog); external side of plasma membrane (ortholog); IgM B cell receptor complex (ortholog) 2 169802567 169805231 - 22301074;30032202 116894481 MODEL JAAIVD010000001;XM_032896191 XP_032752082 B-cell antigen receptor complex-associated protein alpha chain protein-coding 626088154 LOC116885914 elastin-like 16 19342955 19349092 + 30032202 116885914 MODEL JAAIVD010000004;XM_032887229 XP_032743120 protein-coding 626088163 Cort cortistatin ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); neuropeptide signaling pathway (ortholog); regulation of circadian sleep/wake cycle, sleep (ortholog); ASSOCIATED WITH brain infarction (ortholog) 1 11648545 11650207 + 22301074;30032202 116892667 MODEL JAAIVD010000025;XM_032894497;XM_032894506 XP_032750388;XP_032750397 protein-coding 626088174 Gpc5 glypican 5 PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); nephrotic syndrome (ortholog) 12 10263357 10728375 - 22301074;30032202 116913420 MODEL JAAIVD010000007;XM_032917607 XP_032773498 glypican-5 protein-coding 626088184 LOC116908395 small nucleolar RNA SNORA17 8 36899926 36900053 - 116908395 MODEL JAAIVD010000027;XR_004388939 snorna 626088187 LOC116907416 selenoprotein K-like 8 64412172 64412700 - 116907416 MODEL JAAIVD010000027 pseudo 626088188 Nxf3 nuclear RNA export factor 3 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH male infertility (ortholog); FOUND IN cytoplasm (ortholog); nuclear RNA export factor complex (ortholog); nucleoplasm (ortholog) X 88052984 88065985 - 22301074;30032202 116888058 MODEL JAAIVD010000014;XM_032889447 XP_032745338 protein-coding 626088209 Rgs5 regulator of G protein signaling 5 INVOLVED IN negative regulation of vascular associated smooth muscle cell proliferation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); essential hypertension (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog) 10 48855827 48897046 + 116911362 MODEL JAAIVD010000005;XM_032915287 XP_032771178 regulator of G-protein signaling 5 protein-coding 626088219 Tldc2 TBC/LysM-associated domain containing 2 INVOLVED IN negative regulation of cellular response to oxidative stress (ortholog) 5 136424433 136437238 + 30032202 116902217 MODEL JAAIVD010000023;XM_032904620;XM_032904621;XM_032904622 XP_032760511;XP_032760512;XP_032760513 TLD domain-containing protein 2 protein-coding 626088236 LOC116893275 nucleolin-like 2 144205876 144214717 - 116893275 MODEL JAAIVD010000001 pseudo 626088237 Egfl6 EGF like domain multiple 6 INVOLVED IN extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) X 30659353 30716800 - 22301074 116888631 MODEL JAAIVD010000014;XM_032889925 XP_032745816 epidermal growth factor-like protein 6 protein-coding 626088253 LOC116900974 60S ribosomal protein L22-like 1 5 108510638 108510995 + 116900974 MODEL JAAIVD010000023 pseudo 626088254 LOC116885548 gastrula zinc finger protein XlCGF7.1-like 1 157342821 157344720 + 116885548 MODEL JAAIVD010000025 pseudo 626088255 LOC116899970 heterogeneous nuclear ribonucleoprotein A3-like 5 122266404 122267521 + 116899970 MODEL JAAIVD010000023;XR_004387907 pseudo 626088259 LOC116890017 transcription factor BTF3-like 1 193108270 193115659 - 116890017 MODEL JAAIVD010000025 pseudo 626088260 LOC116885077 U6 spliceosomal RNA 15 9602931 9603037 - 116885077 MODEL JAAIVD010000010;XR_004385950 snrna 626088263 LOC116899825 small nucleolar RNA SNORA32 4 26818499 26818620 - 116899825 MODEL JAAIVD010000003;XR_004387825 snorna 626088266 LOC116884352 60S ribosomal protein L15-like 15 36874907 36877186 + 116884352 MODEL JAAIVD010000010 pseudo 626088267 Csrp2 cysteine and glycine rich protein 2 INVOLVED IN myoblast differentiation (ortholog); ASSOCIATED WITH high grade glioma (ortholog) 1 189070429 189089238 + 30032202 116908849 MODEL JAAIVD010000025;XM_032912286 XP_032768177 cysteine and glycine-rich protein 2 protein-coding 626088277 Galnt12 polypeptide N-acetylgalactosaminyltransferase 12 ASSOCIATED WITH Attenuated Adenomatous Polyposis Coli (ortholog); Breast Neoplasms (ortholog); colorectal cancer (ortholog) 1 100185018 100212626 + 30032202 116901970 MODEL JAAIVD010000025;XM_032904213 XP_032760104 protein-coding 626088291 LOC116892406 IgGFc-binding protein-like 2 167868460 167905988 - 22301074 116892406 MODEL JAAIVD010000001;XM_032894084 XP_032749975 protein-coding 626088314 LOC116900511 60S ribosomal protein L17-like 5 78346873 78347953 + 116900511 MODEL JAAIVD010000023 pseudo 626088315 LOC116903021 40S ribosomal protein S17-like 6 154735134 154735501 + 116903021 MODEL JAAIVD010000024 pseudo 626088316 Mrpl57 mitochondrial ribosomal protein L57 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 12 67003935 67004674 - 22301074;30032202 116913392 MODEL JAAIVD010000007;XM_032917575 XP_032773466 ribosomal protein 63, mitochondrial protein-coding 626088322 Ptgdr prostaglandin D2 receptor ENCODES a protein that exhibits prostaglandin D receptor activity (ortholog); prostaglandin J receptor activity (ortholog); INVOLVED IN adenosine metabolic process (ortholog); cellular response to prostaglandin D stimulus (ortholog); inflammatory response (ortholog); PARTICIPATES IN eicosanoid signaling pathway; prostaglandin D2 signaling pathway; ASSOCIATED WITH asthma (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 12 31073367 31082930 + 22301074;30032202 116913101 MODEL JAAIVD010000007;XM_032917243 XP_032773134 protein-coding 626088328 LOC116903610 60S acidic ribosomal protein P0-like 6 62880054 62881159 - 22301074;30032202 116903610 MODEL JAAIVD010000024;XM_032906254 XP_032762145 protein-coding 626088333 Trnau1ap tRNA selenocysteine 1 associated protein 1 ENCODES a protein that exhibits tRNA binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); FOUND IN nucleus (ortholog) 1 25922626 25938213 + 30032202 116895548 MODEL JAAIVD010000025;XM_032896790;XM_032896795;XM_032896797 XP_032752681;XP_032752686;XP_032752688 tRNA selenocysteine 1-associated protein 1 protein-coding 626088350 LOC116900425 olfactory receptor 4C15-like 5 70531342 70532313 - 22301074 116900425 MODEL JAAIVD010000023;XM_032902167 XP_032758058 protein-coding 626088353 Ier5 immediate early response 5 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); positive regulation of cellular response to heat (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 10 34517917 34520030 - 116911341 MODEL JAAIVD010000005;XM_032915256 XP_032771147 immediate early response gene 5 protein protein-coding 626088358 LOC116911816 small nucleolar RNA SNORA48 10 46453354 46453497 + 116911816 MODEL JAAIVD010000005;XR_004389354 snorna 626088361 Spry2 sprouty RTK signaling antagonist 2 ENCODES a protein that exhibits molecular function inhibitor activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); bud elongation involved in lung branching (ortholog); cell fate commitment (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH achalasia (ortholog); ciliopathy (ortholog); cleft lip (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 12 18967047 18971935 + 22301074;30032202 116913542 MODEL JAAIVD010000007;XM_032917742;XM_032917743 XP_032773633;XP_032773634 protein sprouty homolog 2 protein-coding 626088370 LOC116908384 small nucleolar RNA SNORA48 8 41893969 41894100 + 116908384 MODEL JAAIVD010000027 pseudo 626088371 LOC116909360 keratin, type I cytoskeletal 18-like 9 90525935 90527215 + 22301074;30032202 116909360 MODEL JAAIVD010000002;XM_032912908 XP_032768799 protein-coding 626088375 Slc18b1 solute carrier family 18 member B1 ENCODES a protein that exhibits monoamine:proton antiporter activity (ortholog); polyamine:proton antiporter activity (ortholog); INVOLVED IN serotonin uptake (ortholog); spermidine transport (ortholog); spermine transport (ortholog); FOUND IN synaptic vesicle membrane (ortholog) 2 209863760 209906806 + 22301074;30032202 116893552 MODEL JAAIVD010000001;XM_032895267 XP_032751158 MFS-type transporter SLC18B1 protein-coding 626088393 LOC116908878 L-lactate dehydrogenase A chain-like 9 62106334 62107865 + 116908878 MODEL JAAIVD010000002;XR_004389036 pseudo 626088396 LOC116884907 protocadherin alpha-7-like 15 7383472 7388204 - 22301074 116884907 MODEL JAAIVD010000010;XM_032886129 XP_032742020 protein-coding 626088400 LOC116911578 glyceraldehyde-3-phosphate dehydrogenase-like 10 15641167 15645159 - 116911578 MODEL JAAIVD010000005 pseudo 626088401 LOC116907280 S phase cyclin A-associated protein in the endoplasmic reticulum-like 8 3462346 3522109 - 116907280 MODEL JAAIVD010000027;XM_032910231;XM_032910232;XM_032910233 XP_032766122;XP_032766123;XP_032766124 protein-coding 626088421 LOC116897826 polyadenylate-binding protein 4-like 4 11208171 11209814 + 116897826 MODEL JAAIVD010000003 pseudo 626088422 LOC116913516 uncharacterized LOC116913516 12 2409854 2411900 + 116913516 MODEL JAAIVD010000007;XR_004389625 ncrna 626088426 LOC116885993 small nucleolar RNA SNORA70 16 8415561 8415685 - 116885993 MODEL JAAIVD010000004 pseudo 626088427 Utp4 UTP4 small subunit processome component INVOLVED IN maturation of SSU-rRNA (ortholog); regulation of DNA-templated transcription (ortholog); ribosomal small subunit biogenesis (ortholog); ASSOCIATED WITH cholestasis (ortholog); North American Indian Childhood Cirrhosis (ortholog); primary biliary cholangitis (ortholog); FOUND IN chromosome (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 17 26617967 26645081 + 22301074;30032202 116886066 MODEL JAAIVD010000011;XM_032887378;XM_032887379;XM_032887380;XM_032887381 XP_032743269;XP_032743270;XP_032743271;XP_032743272 U3 small nucleolar RNA-associated protein 4 homolog protein-coding 626088457 Creld2 CRELD disulfide isomerase 2 FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 1 258142512 258149577 + 22301074 116914851 MODEL JAAIVD010000025;XM_032919305 XP_032775196 cysteine rich with EGF like domains 2;protein disulfide isomerase CRELD2 protein-coding 626088471 Ndufb5 NADH:ubiquinone oxidoreductase subunit B5 ASSOCIATED WITH acute myocardial infarction (ortholog); COVID-19 (ortholog); Diastolic Dysfunction (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 3 122249709 122264175 - 116896959 MODEL JAAIVD010000012;XM_032898536 XP_032754427 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 5, mitochondrial protein-coding 626088481 LOC116883286 uncharacterized LOC116883286 14 60383407 60387044 + 116883286 MODEL JAAIVD010000009;XR_004385741 ncrna 626088485 LOC116901055 dynactin subunit 5-like 5 137691548 137694357 - 116901055 MODEL JAAIVD010000023 pseudo 626088486 Wee1 WEE1 G2 checkpoint kinase ENCODES a protein that exhibits protein kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN establishment of cell polarity (ortholog); G2/M transition of mitotic cell cycle (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog); nucleus (ortholog) 2 91305343 91328300 - 22301074 116891664 MODEL JAAIVD010000001;XM_032892915;XM_032892916 XP_032748806;XP_032748807 wee1-like protein kinase protein-coding 626088507 LOC116902706 taste receptor type 2 member 110 6 15821062 15822063 + 22301074;30032202 116902706 MODEL JAAIVD010000024;XM_032905059 XP_032760950 protein-coding 626088510 Tnfaip8l3 TNF alpha induced protein 8 like 3 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol transfer activity (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate metabolic process (ortholog); phospholipid transport (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 48000796 48041334 - 22301074;30032202 116907868 MODEL JAAIVD010000027;XM_032911056 XP_032766947 tumor necrosis factor alpha-induced protein 8-like protein 3 protein-coding 626088516 LOC116906889 sialin-like 8 72826283 72833390 - 22301074;30032202 116906889 MODEL JAAIVD010000027;XM_032909802 XP_032765693 protein-coding 626088524 LOC116890536 small nucleolar RNA SNORA17 1 27077132 27077263 - 116890536 MODEL JAAIVD010000025;XR_004386717 snorna 626088527 Vps4a vacuolar protein sorting 4 homolog A ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell division (ortholog); endosomal transport (ortholog); endosomal vesicle fusion (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH CIMDAG SYNDROME (ortholog); congenital dyserythropoietic anemia (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 26756167 26770097 + 22301074;30032202 116886634 MODEL JAAIVD010000011;XM_032888139 XP_032744030 vacuolar protein sorting-associated protein 4A protein-coding 626088542 LOC116884822 uncharacterized LOC116884822 15 34786862 34789351 + 116884822 MODEL JAAIVD010000010;XR_004385900 ncrna 626088546 LOC116906788 olfactory receptor 1073 1 156688858 156696301 + 22301074;30032202 116906788 MODEL JAAIVD010000025;XM_032909653;XM_032909662 XP_032765544;XP_032765553 protein-coding 626088552 Drc7 dynein regulatory complex subunit 7 INVOLVED IN flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog) 17 1935874 1952135 + 30032202 116886584 MODEL JAAIVD010000011;XM_032888109 XP_032744000 protein-coding 626088572 Stoml1 stomatin like 1 ENCODES a protein that exhibits ion channel inhibitor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 8 52125455 52133257 + 30032202 116907431 MODEL JAAIVD010000027;XM_032910399;XM_032910400 XP_032766290;XP_032766291 stomatin-like protein 1 protein-coding 626088584 Ccpg1 cell cycle progression 1 INVOLVED IN positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN membrane (ortholog) 8 67321099 67352896 + 30032202 116908288 MODEL JAAIVD010000027;XM_032911547;XM_032911548;XM_032911549;XM_032911550;XM_032911551;XR_004388877 XP_032767438;XP_032767439;XP_032767440;XP_032767441;XP_032767442 cell cycle progression protein 1 protein-coding 626088612 LOC116899791 U7 small nuclear RNA 4 96373249 96373311 - 116899791 MODEL JAAIVD010000003;XR_004387797 snrna 626088615 LOC116895312 40S ribosomal protein S26-like 3 23915413 23915670 + 22301074;30032202 116895312 MODEL JAAIVD010000012;XM_032896622 XP_032752513 protein-coding 626088618 LOC116885742 Y-linked testis-specific protein 1-like 16 28053202 28055078 + 22301074;30032202 116885742 MODEL JAAIVD010000004;XM_032887049 XP_032742940 protein-coding 626088622 Ccdc30 coiled-coil domain containing 30 1 37563080 37639090 + 116897514 MODEL JAAIVD010000025;XM_032899140;XM_032899141;XM_032899142;XM_032899143;XM_032899144;XM_032899145;XM_032899146;XM_032899147 XP_032755031;XP_032755032;XP_032755033;XP_032755034;XP_032755035;XP_032755036;XP_032755037;XP_032755038 coiled-coil domain-containing protein 30 protein-coding 626088662 LOC116901729 uncharacterized LOC116901729 1 95928154 95930202 - 116901729 MODEL JAAIVD010000025;XR_004388014 ncrna 626088667 Zfp3 ZFP3 zinc finger protein 9 50386996 50388757 + 30032202 116909800 MODEL JAAIVD010000002;XM_032913496 XP_032769387 zinc finger protein 3 homolog protein-coding 626088672 Il36b interleukin 36 beta ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN positive regulation of cytokine production (ortholog); positive regulation of interleukin-6 production (ortholog); positive regulation of T cell differentiation (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN extracellular space (ortholog) 5 12943841 12949158 + 22301074;30032202 116900030 MODEL JAAIVD010000023;XM_032901827 XP_032757718 interleukin-36 beta protein-coding 626088678 Sqor sulfide quinone oxidoreductase ENCODES a protein that exhibits glutathione-dependent sulfide quinone oxidoreductase activity (ortholog); sulfide:quinone oxidoreductase activity (ortholog); INVOLVED IN sulfide oxidation, using sulfide:quinone oxidoreductase (ortholog); ASSOCIATED WITH COVID-19 (ortholog); SULFIDE:QUINONE OXIDOREDUCTASE DEFICIENCY (ortholog); FOUND IN mitochondrion (ortholog) 5 100852597 100893375 + 30032202 116901896 MODEL JAAIVD010000023;XM_032904106 XP_032759997 sulfide:quinone oxidoreductase, mitochondrial protein-coding 626088692 LOC116900398 olfactory receptor 4C11-like 5 70012131 70013042 + 22301074 116900398 MODEL JAAIVD010000023;XM_032902145 XP_032758036 protein-coding 626088695 Ptcd3 pentatricopeptide repeat domain 3 ENCODES a protein that exhibits ribosomal small subunit binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 51 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 74906793 74934036 - 22301074;30032202 116903692 MODEL JAAIVD010000024;XM_032906364;XM_032906365 XP_032762255;XP_032762256 pentatricopeptide repeat domain-containing protein 3, mitochondrial protein-coding 626088726 LOC116894121 olfactory receptor 52N2-like 2 103814005 103814955 + 22301074 116894121 MODEL JAAIVD010000001;XM_032895839 XP_032751730 protein-coding 626088729 LOC116894214 olfactory receptor 10K1-like 2 106563019 106563984 - 22301074 116894214 MODEL JAAIVD010000001;XM_032895927 XP_032751818 protein-coding 626088732 LOC116886578 40S ribosomal protein S24-like 17 36775397 36780093 + 116886578 MODEL JAAIVD010000011 pseudo 626088733 LOC116903598 H/ACA ribonucleoprotein complex subunit 2-like 1 140850354 140851009 + 116903598 MODEL JAAIVD010000025 pseudo 626088734 LOC116911732 glyceraldehyde-3-phosphate dehydrogenase-like 10 85948763 85949743 + 116911732 MODEL JAAIVD010000005 pseudo 626088735 LOC116901380 actin, cytoplasmic 2-like 5 20289847 20290896 + 116901380 MODEL JAAIVD010000023 pseudo 626088736 LOC116914420 salivary glue protein Sgs-3-like 13 12968141 12971829 + 116914420 MODEL JAAIVD010000008;XM_032918689 XP_032774580 protein-coding 626088744 LOC116884296 uncharacterized LOC116884296 15 66929023 66931196 + 116884296 MODEL JAAIVD010000010;XM_032885394 XP_032741285 uncharacterized protein LOC116884296 protein-coding 626088752 Pex1 peroxisomal biogenesis factor 1 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); protein transporter activity (ortholog); INVOLVED IN microtubule-based peroxisome localization (ortholog); peroxisome organization (ortholog); protein import into peroxisome matrix (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); peroxisomal membrane (ortholog) 6 135872638 135913294 + 22301074;30032202 116904115 MODEL JAAIVD010000024;XM_032906996 XP_032762887 peroxisome biogenesis factor 1 protein-coding 626088780 LOC116904300 tubulin alpha-1 chain-like 6 45389625 45390624 + 116904300 MODEL JAAIVD010000024 pseudo 626088781 LOC116904609 voltage-dependent anion-selective channel protein 2-like 6 25098953 25099768 - 116904609 MODEL JAAIVD010000024 pseudo 626088782 LOC116887572 galanin receptor type 3-like 18 4723118 4724098 - 22301074;30032202 116887572 MODEL JAAIVD010000013;XM_032889192 XP_032745083 protein-coding 626088785 Klf10 KLF transcription factor 10 ENCODES a protein that exhibits core promoter sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to endothelin (ortholog); cellular response to starvation (ortholog); FOUND IN nucleus (ortholog) 1 211765547 211771889 - 30032202 116910793 MODEL JAAIVD010000025;XM_032914589 XP_032770480 Krueppel-like factor 10;Kruppel like factor 10 protein-coding 626088793 LOC116883181 60S ribosomal protein L7a-like 14 30443815 30483183 + 116883181 MODEL JAAIVD010000009 pseudo 626088794 LOC116892025 40S ribosomal protein SA-like 2 15643581 15644457 - 116892025 MODEL JAAIVD010000001 pseudo 626088795 LOC116910685 small nucleolar RNA SNORA19 9 68571409 68571569 + 116910685 MODEL JAAIVD010000002 pseudo 626088796 LOC116905030 high mobility group protein B1-like 7 64823085 64823736 - 116905030 MODEL JAAIVD010000026 pseudo 626088797 Alb albumin ENCODES a protein that exhibits DNA binding (ortholog); enterobactin binding (ortholog); enzyme binding (ortholog); INVOLVED IN bilirubin transport (ortholog); cellular response to calcium ion starvation (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; organophosphate response pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); Acute Liver Failure (ortholog); FOUND IN basement membrane (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 11 3904698 3920100 + 22301074;30032202 116912239 MODEL JAAIVD010000006;XM_032916218 XP_032772109 serum albumin protein-coding 626088816 Cfap57 cilia and flagella associated protein 57 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium organization (ortholog); single fertilization (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ciliary dyskinesia (ortholog); spermatogenic failure 95 (ortholog); FOUND IN sperm flagellum (ortholog) 1 38408606 38487266 + 22301074 116897738 MODEL JAAIVD010000025;XM_032899181 XP_032755072 cilia- and flagella-associated protein 57 protein-coding 626088843 Ybx1 Y-box binding protein 1 ENCODES a protein that exhibits C5-methylcytidine-containing RNA reader activity (ortholog); chromatin binding (ortholog); GTPase binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); CRD-mediated mRNA stabilization (ortholog); epidermis development (ortholog); PARTICIPATES IN cisplatin drug pathway; p53 signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colonic Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN CRD-mediated mRNA stability complex (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 1 37666574 37683076 + 22301074;30032202 116897600 MODEL JAAIVD010000025;XM_032899148;XM_032899149 XP_032755039;XP_032755040 Y-box-binding protein 1 protein-coding 626088857 LOC116900764 small nuclear ribonucleoprotein F-like 5 151590350 151590610 - 22301074;30032202 116900764 MODEL JAAIVD010000023;XM_032902474 XP_032758365 protein-coding 626088860 LOC116911213 glyceraldehyde-3-phosphate dehydrogenase-like 10 26993633 26994634 - 116911213 MODEL JAAIVD010000005 pseudo 626088861 LOC116901755 mRNA turnover protein 4 homolog 5 91914368 91915839 + 116901755 MODEL JAAIVD010000023 pseudo 626088862 LOC116884523 mitochondrial ornithine transporter 2-like 15 58408175 58412906 - 30032202 116884523 MODEL JAAIVD010000010;XM_032885657 XP_032741548 protein-coding 626088867 Spata1 spermatogenesis associated 1 FOUND IN acrosomal vesicle (ortholog); cytoplasmic vesicle (ortholog) 3 14405335 14451949 + 116896169 MODEL JAAIVD010000012;XM_032897204 XP_032753095 spermatogenesis-associated protein 1 protein-coding 626088885 Ttpal alpha tocopherol transfer protein like 5 154346617 154362562 - 30032202 116902376 MODEL JAAIVD010000023;XM_032904879;XM_032904880 XP_032760770;XP_032760771 alpha-tocopherol transfer protein-like protein-coding 626088896 LOC116893064 ATP synthase F(0) complex subunit C2, mitochondrial-like 2 37598595 37602922 - 116893064 MODEL JAAIVD010000001 pseudo 626088897 Ppp1r42 protein phosphatase 1 regulatory subunit 42 ENCODES a protein that exhibits actin binding (ortholog); dynein complex binding (ortholog); tubulin binding (ortholog); INVOLVED IN regulation of phosphatase activity (ortholog); FOUND IN centrosome (ortholog); manchette (ortholog); microtubule cytoskeleton (ortholog) 1 144727171 144769484 - 22301074 116889684 MODEL JAAIVD010000025;XM_032890575 XP_032746466 protein-coding 626088910 Mymx myomixer, myoblast fusion factor INVOLVED IN myoblast fusion (ortholog); myoblast fusion involved in skeletal muscle regeneration (ortholog); plasma membrane fusion (ortholog); ASSOCIATED WITH Carey-Fineman-Ziter syndrome 2 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) 4 84287201 84287458 + 30032202 116898051 MODEL JAAIVD010000003;XM_032899444 XP_032755335 protein myomixer protein-coding 626088914 Nbeal1 neurobeachin like 1 ASSOCIATED WITH coronary artery disease (ortholog) 5 6110149 6216880 - 30032202 116900002 MODEL JAAIVD010000023;XM_032901807 XP_032757698 neurobeachin-like protein 1 protein-coding 626088958 LOC116900945 olfactory receptor 4F4-like 5 89782787 89786150 + 22301074 116900945 MODEL JAAIVD010000023;XM_032902586 XP_032758477 protein-coding 626088962 Gstm4 glutathione S-transferase mu 4 ENCODES a protein that exhibits enzyme binding (ortholog); glutathione binding (ortholog); glutathione transferase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); long-chain fatty acid biosynthetic process (ortholog); nitrobenzene metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); neurodegenerative disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 3 50208978 50214037 + 22301074;30032202 116896374 MODEL JAAIVD010000012;XM_032897497 XP_032753388 protein-coding 626088974 Ms4a18 membrane spanning 4-domains A18 2 10477082 10504214 - 30032202 116891566 MODEL JAAIVD010000001;XM_032892745 XP_032748636 membrane-spanning 4-domains subfamily A member 18 protein-coding 626088985 Mrgbp MRG domain binding protein INVOLVED IN positive regulation of double-strand break repair via homologous recombination (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 5 157684486 157688010 + 22301074;30032202 116902412 MODEL JAAIVD010000023;XM_032904942;XR_004388067 XP_032760833 MRG/MORF4L-binding protein protein-coding 626088997 LOC116901065 zinc finger protein 431-like 5 142522283 142525719 + 116901065 MODEL JAAIVD010000023 pseudo 626088998 Sarm1 sterile alpha and TIR motif containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); NAD+ nucleosidase activity (ortholog); NAD+ nucleosidase activity, cyclic ADP-ribose generating (ortholog); INVOLVED IN modification of postsynaptic structure (ortholog); NAD+ catabolic process (ortholog); nervous system process (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); respiratory syncytial virus infectious disease (ortholog); Vision Disorders (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); dendrite (ortholog) 9 91945127 91967923 + 22301074;30032202 116909247 MODEL JAAIVD010000002;XM_032912771 XP_032768662 sterile alpha and TIR motif-containing protein 1 protein-coding 626089011 Brme1 break repair meiotic recombinase recruitment factor 1 ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); double-strand break repair via homologous recombination (ortholog); female meiosis I (ortholog); FOUND IN chromosome (ortholog); site of double-strand break (ortholog) 17 16119310 16129924 - 22301074;30032202 116886105 MODEL JAAIVD010000011;XM_032887435 XP_032743326 C17H19orf57 chromosome 17 C19orf57 homolog;uncharacterized protein C19orf57 homolog protein-coding 626089022 Crebrf CREB3 regulatory factor ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); negative regulation of endoplasmic reticulum unfolded protein response (ortholog); negative regulation of nuclear receptor-mediated glucocorticoid signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 9 4672674 4750705 - 30032202 116909895 MODEL JAAIVD010000002;XM_032913642;XM_032913643;XM_032913645;XM_032913646 XP_032769533;XP_032769534;XP_032769536;XP_032769537 protein-coding 626089044 Rasgrp2 RAS guanyl releasing protein 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); leukocyte adhesion deficiency 3 (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 2 1267807 1284488 - 22301074;30032202 116890656 MODEL JAAIVD010000001;XM_032891038;XM_032891039;XM_032891040;XM_032891041;XM_032891042;XM_032891043;XM_032891044;XM_032891045 XP_032746929;XP_032746930;XP_032746931;XP_032746932;XP_032746933;XP_032746934;XP_032746935;XP_032746936 RAS guanyl-releasing protein 2 protein-coding 626089086 Efhd1 EF-hand domain family member D1 ENCODES a protein that exhibits calcium ion sensor activity (ortholog); INVOLVED IN neuron projection development (ortholog); regulation of cellular hyperosmotic salinity response (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN mitochondrial inner membrane (ortholog) 4 159393098 159439676 + 30032202 116899603 MODEL JAAIVD010000003;XM_032901553;XM_032901554;XM_032901555 XP_032757444;XP_032757445;XP_032757446 EF-hand domain-containing protein D1 protein-coding 626089102 LOC116911997 PRAME family member 12-like 11 48751922 48754533 + 116911997 MODEL JAAIVD010000006 pseudo 626089103 LOC116894849 U6 spliceosomal RNA 2 7936236 7936342 + 116894849 MODEL JAAIVD010000001;XR_004387064 snrna 626089106 Nfya nuclear transcription factor Y subunit alpha ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of stem cell proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN altered p53 signaling pathway; ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN CCAAT-binding factor complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 81517295 81543483 + 22301074;30032202 116899067 MODEL JAAIVD010000003;XM_032900537;XM_032900538;XM_032900539;XM_032900540;XM_032900541;XM_032900543;XM_032900544 XP_032756428;XP_032756429;XP_032756430;XP_032756431;XP_032756432;XP_032756434;XP_032756435 protein-coding 626089136 Cdk9 cyclin dependent kinase 9 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); host-mediated activation of viral transcription (ortholog); negative regulation of protein localization to chromatin (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); medulloblastoma (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); nucleoplasm (ortholog) 5 2927227 2932739 + 22301074;30032202 116901136 MODEL JAAIVD010000023;XM_032902737 XP_032758628 cyclin-dependent kinase 9 protein-coding 626089147 LOC116885405 noelin-like 1 55426019 55426686 + 116885405 MODEL JAAIVD010000025 pseudo 626089148 LOC116912557 cytochrome P450 11B1, mitochondrial 1 247587200 247592982 - 22301074;30032202 116912557 MODEL JAAIVD010000025;XM_032916663;XM_032916669 XP_032772554;XP_032772560 protein-coding 626089162 Efcab3 EF-hand calcium binding domain 3 9 73997133 74028545 - 22301074 116909756 MODEL JAAIVD010000002;XM_032913442 XP_032769333 EF-hand calcium-binding domain-containing protein 3 protein-coding 626089176 Npas1 neuronal PAS domain protein 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN maternal behavior (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 172585319 172606467 + 22301074;30032202 116892595 MODEL JAAIVD010000001;XM_032894375 XP_032750266 neuronal PAS domain-containing protein 1 protein-coding 626089192 LOC116905733 gem-associated protein 8-like 7 79807784 79808951 + 22301074;30032202 116905733 MODEL JAAIVD010000026;XM_032908699 XP_032764590 protein-coding 626089197 Pcsk1n proprotein convertase subtilisin/kexin type 1 inhibitor ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN peptide hormone processing (ortholog); response to cold (ortholog); response to dietary excess (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); Dehydration (ortholog); FOUND IN extracellular space (ortholog); secretory granule (ortholog); trans-Golgi network (ortholog) X 14212613 14216118 - 22301074;30032202 116888963 MODEL JAAIVD010000014;XM_032890195 XP_032746086 proSAAS protein-coding 626089204 Plekha5 pleckstrin homology domain containing A5 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); INVOLVED IN reproductive system development (ortholog); ASSOCIATED WITH BILATERAL CLEFT LIP (ortholog); cleft lip (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 6 8954809 9134768 - 22301074;30032202 116903137 MODEL JAAIVD010000024;XM_032905493;XM_032905494;XM_032905495;XM_032905496;XR_004388253;XR_004388254 XP_032761384;XP_032761385;XP_032761386;XP_032761387 pleckstrin homology domain-containing family A member 5 protein-coding 626089254 Nup50 nucleoporin 50 INVOLVED IN neural tube formation (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nuclear pore (ortholog) 1 254305843 254324975 + 22301074;30032202 116914590 MODEL JAAIVD010000025;XM_032918955 XP_032774846 nuclear pore complex protein Nup50 protein-coding 626089266 Nppb natriuretic peptide B ENCODES a protein that exhibits hormone activity (ortholog); hormone receptor binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN brain natriuretic peptide signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adult respiratory distress syndrome (ortholog); Animal Disease Models (ortholog); FOUND IN extracellular space (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 1 12786337 12787710 - 22301074;30032202 116886197 MODEL JAAIVD010000025;XM_032887581 XP_032743472 natriuretic peptides B protein-coding 626089273 C8H3orf86 chromosome 8 C3orf86 homolog 8 113944236 113945462 - 116908006 MODEL JAAIVD010000027;XM_032911263 XP_032767154 C3orf86P Uncharacterized protein C3orf86 homolog protein-coding 626089278 Cdkn2d cyclin dependent kinase inhibitor 2D ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase inhibitor activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagic cell death (ortholog); DNA synthesis involved in DNA repair (ortholog); negative regulation of cell cycle G1/S phase transition (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cyclin D2-CDK4 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 17553736 17556420 - 30032202 116907106 MODEL JAAIVD010000027;XM_032910075 XP_032765966 cyclin-dependent kinase 4 inhibitor D protein-coding 626089285 LOC116885640 CD209 antigen-like protein D 16 1737375 1743758 - 116885640 MODEL JAAIVD010000004;XM_032886948;XM_032886949 XP_032742839;XP_032742840 protein-coding 626089299 LOC116900860 stress-70 protein, mitochondrial-like 5 63962265 63978251 - 116900860 MODEL JAAIVD010000023 pseudo 626089300 LOC116907155 cytochrome P450 4F5-like 1 157012917 157025515 + 22301074 116907155 MODEL JAAIVD010000025;XM_032910145 XP_032766036 protein-coding 626089315 Vopp1 VOPP1 WW domain binding protein ENCODES a protein that exhibits enzyme binding (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); endosome (ortholog); late endosome (ortholog) 6 83574891 83637478 - 22301074;30032202 116903737 MODEL JAAIVD010000024;XM_032906422 XP_032762313 vesicular, overexpressed in cancer, prosurvival protein 1 protein-coding 626089324 Tspan18 tetraspanin 18 INVOLVED IN calcium-ion regulated exocytosis (ortholog); establishment of localization in cell (ortholog); hemostasis (ortholog); ASSOCIATED WITH schizophrenia (ortholog) 5 67372220 67505046 - 22301074;30032202 116901651 MODEL JAAIVD010000023;XM_032903759 XP_032759650 tetraspanin-18 protein-coding 626089338 Tcf12 transcription factor 12 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); cAMP response element binding (ortholog); DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of gene expression (ortholog); positive regulation of neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); craniosynostosis (ortholog); craniosynostosis 3 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 8 66134196 66427776 - 22301074;30032202 116907274 MODEL JAAIVD010000027;XM_032910228 XP_032766119 protein-coding 626089363 LOC116897011 uncharacterized LOC116897011 3 136911034 136932153 + 116897011 MODEL JAAIVD010000012 pseudo 626089364 Cxxc1 CXXC finger protein 1 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); histone H3K4me3 reader activity (ortholog); unmethylated CpG binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); regulation of DNA-templated transcription (ortholog); PARTICIPATES IN DNA modification pathway; histone modification pathway; FOUND IN cytosol (ortholog); histone methyltransferase complex (ortholog); nuclear matrix (ortholog) 15 57715783 57733286 - 22301074;30032202 116884652 MODEL JAAIVD010000010;XM_032885809 XP_032741700 CXXC-type zinc finger protein 1 protein-coding 626089384 LOC116898555 WASH complex subunit 1-like 4 154778794 154781275 - 22301074;30032202 116898555 MODEL JAAIVD010000003;XM_032899765 XP_032755656 protein-coding 626089391 Slc15a2 solute carrier family 15 member 2 ENCODES a protein that exhibits dipeptide transmembrane transporter activity (ortholog); high-affinity oligopeptide transmembrane transporter activity (ortholog); peptide:proton symporter activity (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); dipeptide import across plasma membrane (ortholog); dipeptide transport (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); melanoma (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog); phagocytic vesicle membrane (ortholog) 4 21616264 21644569 - 22301074;30032202 116898826 MODEL JAAIVD010000003;XM_032900178 XP_032756069 protein-coding 626089417 Ccdc149 coiled-coil domain containing 149 11 53663639 53758424 + 116912112 MODEL JAAIVD010000006;XM_032916013 XP_032771904 coiled-coil domain-containing protein 149 protein-coding 626089433 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 167621202 167621295 - 116895150 MODEL JAAIVD010000001 trna 626089434 Hdac11 histone deacetylase 11 ENCODES a protein that exhibits histone deacetylase activity, hydrolytic mechanism (ortholog); INVOLVED IN oligodendrocyte development (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN histone deacetylase complex (ortholog); nucleus (ortholog); plasma membrane (ortholog) 6 55763188 55780515 - 22301074 116903504 MODEL JAAIVD010000024;XM_032906101;XM_032906102 XP_032761992;XP_032761993 protein-coding 626089449 LOC116883953 aldo-keto reductase family 1 member C13-like 14 18467549 18484413 + 30032202 116883953 MODEL JAAIVD010000009;XM_032885199 XP_032741090 protein-coding 626089460 Zfx zinc finger protein X-linked ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN fertilization (ortholog); germ cell development (ortholog); homeostasis of number of cells (ortholog); ASSOCIATED WITH syndromic X-linked intellectual developmental disorder 37 (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 51993507 52036827 - 22301074;30032202 116888294 MODEL JAAIVD010000014;XM_032889567 XP_032745458 zinc finger X-chromosomal protein protein-coding 626089473 LOC116915237 ZW10 interactor-like 14 36863695 36864375 + 116915237 MODEL JAAIVD010000009 pseudo 626089474 LOC116896019 myosin regulatory light chain 12A-like 3 179904877 179906689 - 116896019 MODEL JAAIVD010000012 pseudo 626089475 Adgra1 adhesion G protein-coupled receptor A1 FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) 2 61980421 62022476 - 22301074;30032202 116891358 MODEL JAAIVD010000001;XM_032892354 XP_032748245 protein-coding 626089486 Col18a1 collagen type XVIII alpha 1 chain ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); endothelial cell morphogenesis (ortholog); extracellular matrix organization (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH angiosarcoma (ortholog); calcinosis (ortholog); cataract (ortholog); FOUND IN basement membrane (ortholog); extracellular space (ortholog) 18 388502 449840 - 22301074 116887184 MODEL JAAIVD010000013;XM_032888738;XM_032888739 XP_032744629;XP_032744630 collagen alpha-1(XVIII) chain protein-coding 626089533 Dicer1 dicer 1, ribonuclease III ENCODES a protein that exhibits double-stranded RNA binding (ortholog); miRNA binding (ortholog); pre-miRNA binding (ortholog); INVOLVED IN ameloblast differentiation (ortholog); angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH breast cancer (ortholog); Breast Neoplasms (ortholog); childhood kidney cell carcinoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 7 115781547 115821906 - 22301074;30032202 116905385 MODEL JAAIVD010000026;XM_032908328 XP_032764219 endoribonuclease Dicer protein-coding 626089563 Tmem33 transmembrane protein 33 INVOLVED IN positive regulation of IRE1-mediated unfolded protein response (ortholog); positive regulation of PERK-mediated unfolded protein response (ortholog); regulation of endoplasmic reticulum tubular network organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); melanosome (ortholog) 11 24379487 24401358 + 22301074;30032202 116912224 MODEL JAAIVD010000006;XM_032916181;XM_032916183 XP_032772072;XP_032772074 protein-coding 626089578 LOC116895374 uncharacterized LOC116895374 3 53446888 53453114 + 116895374 MODEL JAAIVD010000012;XR_004387271 ncrna 626089582 LOC116897983 40S ribosomal protein S7-like 4 53915100 53915580 - 116897983 MODEL JAAIVD010000003 pseudo 626089583 LOC116887616 phosphatidylethanolamine-binding protein 1-like 18 9848343 9848895 + 116887616 MODEL JAAIVD010000013 pseudo 626089584 LOC116904221 uncharacterized LOC116904221 6 154224807 154260697 - 116904221 MODEL JAAIVD010000024;XR_004388336 ncrna 626089589 LOC116890064 uncharacterized LOC116890064 1 214590137 214591966 - 116890064 MODEL JAAIVD010000025;XR_004386527 ncrna 626089594 LOC116898177 MAGUK p55 subfamily member 5-like 4 127734238 127736150 + 116898177 MODEL JAAIVD010000003 pseudo 626089595 LOC116910212 olfactory receptor 1P1-like 9 93026867 93027838 + 22301074 116910212 MODEL JAAIVD010000002;XM_032914093 XP_032769984 protein-coding 626089598 LOC116883291 zinc finger protein 391-like 14 41122065 41124231 - 116883291 MODEL JAAIVD010000009;XM_032884288 XP_032740179 protein-coding 626089603 LOC116895504 uncharacterized LOC116895504 3 108114944 108118486 - 116895504 MODEL JAAIVD010000012;XR_004387282 ncrna 626089608 Med15 mediator complex subunit 15 INVOLVED IN somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; schizophrenia pathway; ASSOCIATED WITH Hirschsprung's disease (ortholog); schizophrenia (ortholog); FOUND IN core mediator complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 2897914 2972241 - 22301074 116898649 MODEL JAAIVD010000003;XM_032899877;XM_032899878;XM_032899879 XP_032755768;XP_032755769;XP_032755770 mediator of RNA polymerase II transcription subunit 15 protein-coding 626089636 Atg7 autophagy related 7 ENCODES a protein that exhibits Atg12 activating enzyme activity (ortholog); Atg8 activating enzyme activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN adult walking behavior (ortholog); autophagosome assembly (ortholog); autophagy (ortholog); PARTICIPATES IN autophagy pathway; mitochondrial autophagy pathway; ASSOCIATED WITH alcoholic cardiomyopathy (ortholog); alcoholic hepatitis (ortholog); Alcoholic Liver Diseases (ortholog); FOUND IN axon (ortholog); axoneme (ortholog); cytoplasm (ortholog) 6 31808516 31986019 - 22301074;30032202 116903392 MODEL JAAIVD010000024;XM_032905890;XM_032905891 XP_032761781;XP_032761782 ubiquitin-like modifier-activating enzyme ATG7 protein-coding 626089661 LOC116888229 uncharacterized LOC116888229 X 130322071 130327314 + 22301074 116888229 MODEL JAAIVD010000014;XM_032889516 XP_032745407 uncharacterized protein LOC116888229 protein-coding 626089667 LOC116884533 uncharacterized LOC116884533 15 64761536 64763702 - 116884533 MODEL JAAIVD010000010;XR_004385876 ncrna 626089671 LOC116909841 testis-expressed protein 19.2 9 62919999 62922590 + 30032202 116909841 MODEL JAAIVD010000002;XM_032913566;XM_032913567 XP_032769457;XP_032769458 protein-coding 626089681 LOC116903153 histone H2A.J 6 12656473 12656990 - 22301074;30032202 116903153 MODEL JAAIVD010000024;XM_032905517 XP_032761408 protein-coding 626089686 Mzt1 mitotic spindle organizing protein 1 INVOLVED IN gamma-tubulin complex localization (ortholog); FOUND IN centrosome (ortholog); gamma-tubulin ring complex (ortholog); spindle (ortholog) 12 25467171 25479191 + 22301074;30032202 116913563 MODEL JAAIVD010000007;XM_032917775 XP_032773666 mitotic-spindle organizing protein 1 protein-coding 626089693 LOC116893988 olfactory receptor 52H1 2 101480042 101481004 + 22301074 116893988 MODEL JAAIVD010000001;XM_032895703 XP_032751594 protein-coding 626089697 LOC116913631 mast cell protease 1-like 12 69068042 69070407 + 116913631 MODEL JAAIVD010000007 pseudo 626089698 C6H12orf71 chromosome 6 C12orf71 homolog 6 4619441 4622267 - 116903095 MODEL JAAIVD010000024;XM_032905417;XM_032905418 XP_032761308;XP_032761309 uncharacterized protein C12orf71 homolog protein-coding 626089709 Ccng2 cyclin G2 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH colon cancer (ortholog); Experimental Liver Neoplasms (ortholog); head and neck cancer (ortholog) 11 6071837 6080322 + 30032202 116912381 MODEL JAAIVD010000006;XM_032916440 XP_032772331 cyclin-G2 protein-coding 626089721 LOC116904517 heterogeneous nuclear ribonucleoprotein M-like 6 6957231 6964999 - 116904517 MODEL JAAIVD010000024 pseudo 626089722 Abhd14b abhydrolase domain containing 14B ENCODES a protein that exhibits hydrolase activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 8 97748446 97752630 + 30032202 116907482 MODEL JAAIVD010000027;XM_032910469 XP_032766360 protein ABHD14B protein-coding 626089730 C15H5orf63 chromosome 15 C5orf63 homolog ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN mitochondrion (ortholog) 15 74861853 74884845 + 116884754 MODEL JAAIVD010000010;XM_032885973 XP_032741864 glutaredoxin-like protein C5orf63 homolog protein-coding 626089739 LOC116894572 proteasome activator complex subunit 3-like 2 178802796 178803547 + 116894572 MODEL JAAIVD010000001 pseudo 626089740 LOC116896155 actin, alpha skeletal muscle-like 1 80304957 80306594 - 116896155 MODEL JAAIVD010000025;XM_032897191 XP_032753082 protein-coding 626089744 LOC116904331 platelet glycoprotein 4-like 6 64842809 64869150 + 30032202 116904331 MODEL JAAIVD010000024;XM_032907237 XP_032763128 protein-coding 626089757 LOC116903764 taste receptor type 2 member 116-like 6 15828303 15829275 + 116903764 MODEL JAAIVD010000024 pseudo 626089758 LOC116886588 small nuclear ribonucleoprotein Sm D3-like 17 3046419 3046838 - 22301074;30032202 116886588 MODEL JAAIVD010000011;XM_032888113 XP_032744004 protein-coding 626089761 LOC116895537 nucleoside diphosphate kinase B-like 3 120545859 120546484 + 116895537 MODEL JAAIVD010000012 pseudo 626089762 LOC116904623 olfactory receptor 6C4-like 6 30107880 30108863 - 22301074;30032202 116904623 MODEL JAAIVD010000024;XM_032907413 XP_032763304 protein-coding 626089765 Dctpp1 dCTP pyrophosphatase 1 ENCODES a protein that exhibits dCTP diphosphatase activity (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN dCTP catabolic process (ortholog); DNA protection (ortholog); dTTP catabolic process (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 74628040 74631512 + 116893897 MODEL JAAIVD010000001;XM_032895619 XP_032751510 protein-coding 626089772 Tada2a transcriptional adaptor 2A ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); mitotic cell cycle (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); mitotic spindle (ortholog); nucleus (ortholog) 9 86553569 86600733 + 22301074;30032202 116910581 MODEL JAAIVD010000002;XM_032914503 XP_032770394 transcriptional adapter 2-alpha protein-coding 626089792 Slc5a3 solute carrier family 5 member 3 ENCODES a protein that exhibits D-glucose:sodium symporter activity (ortholog); fucose transmembrane transporter activity (ortholog); myo-inositol:sodium symporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); fucose transmembrane transport (ortholog); inositol metabolic process (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); coronary artery disease (ortholog); renal cell carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog) 4 52534148 52554810 - 22301074;30032202 116898983 MODEL JAAIVD010000003;XM_032900410 XP_032756301 sodium/myo-inositol cotransporter protein-coding 626089798 Trnav-uac transfer RNA valine (anticodon UAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). X 32125110 32125182 + 116889585 MODEL JAAIVD010000014 trna 626089799 Tmlhe trimethyllysine hydroxylase, epsilon ENCODES a protein that exhibits oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); trimethyllysine dioxygenase activity (ortholog); INVOLVED IN carnitine biosynthetic process (ortholog); PARTICIPATES IN carnitine biosynthetic pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); autistic disorder (ortholog); cerebellar hypoplasia (ortholog); FOUND IN mitochondrion (ortholog) 18 11170836 11213767 - 22301074;30032202 116887196 MODEL JAAIVD010000013;XM_032888753 XP_032744644 trimethyllysine dioxygenase, mitochondrial protein-coding 626089811 Rars1 arginyl-tRNA synthetase 1 ENCODES a protein that exhibits arginine binding (ortholog); arginine-tRNA ligase activity (ortholog); ATP binding (ortholog); INVOLVED IN arginyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hypomyelinating leukodystrophy 9 (ortholog); leukodystrophy (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 18992745 19015925 - 22301074;30032202 116909092 MODEL JAAIVD010000002;XM_032912562 XP_032768453 arginine--tRNA ligase, cytoplasmic protein-coding 626089829 Gp1ba glycoprotein Ib platelet subunit alpha INVOLVED IN blood coagulation (ortholog); blood coagulation, intrinsic pathway (ortholog); cell adhesion (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH autoimmune thrombocytopenic purpura (ortholog); bacterial pneumonia (ortholog); Bernard-Soulier syndrome (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); glycoprotein Ib-IX-V complex (ortholog) 9 50250778 50253358 + 22301074 116909277 MODEL JAAIVD010000002;XM_032912812 XP_032768703 platelet glycoprotein Ib alpha chain protein-coding 626089833 Trnar-ucg transfer RNA arginine (anticodon UCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41464240 41464312 + 116884201 MODEL JAAIVD010000009 trna 626089834 Rps18 ribosomal protein S18 ENCODES a protein that exhibits protein kinase binding (ortholog); structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 18 6958459 6962222 - 22301074;30032202 116887044 MODEL JAAIVD010000013;XM_032888536 XP_032744427 40S ribosomal protein S18 protein-coding 626089843 LOC116890513 5S ribosomal RNA 1 108048187 108048305 + 116890513 MODEL JAAIVD010000025 pseudo 626089844 LOC116887116 solute carrier family 5 member 4-like 18 11337334 11388230 + 22301074;30032202 116887116 MODEL JAAIVD010000013;XM_032888661;XM_032888662 XP_032744552;XP_032744553 protein-coding 626089866 Scel sciellin INVOLVED IN embryo development ending in birth or egg hatching (ortholog); epidermis development (ortholog); keratinocyte differentiation (ortholog); FOUND IN cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 12 21114432 21214767 - 30032202 116913486 MODEL JAAIVD010000007;XM_032917686 XP_032773577 protein-coding 626089901 Stag1 STAG1 cohesin complex component ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mitotic spindle assembly (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 47 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); cilium (ortholog); cohesin complex (ortholog) 8 91952328 92324303 + 30032202 116907227 MODEL JAAIVD010000027;XM_032910190;XM_032910191;XM_032910192 XP_032766081;XP_032766082;XP_032766083 cohesin subunit SA-1;stromal antigen 1 protein-coding 626089943 Kiaa1671 KIAA1671 ortholog FOUND IN cilium (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 16 40752979 40901628 + 116885816 MODEL JAAIVD010000004;XM_032887157;XM_032887158 XP_032743048;XP_032743049 uncharacterized protein KIAA1671 homolog protein-coding 626089963 Asf1b anti-silencing function 1B histone chaperone ENCODES a protein that exhibits histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH breast cancer (ortholog); castration-resistant prostate carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 17 16313559 16328119 - 22301074;30032202 116886150 MODEL JAAIVD010000011;XM_032887510 XP_032743401 histone chaperone ASF1B protein-coding 626089971 LOC116897335 adhesion G-protein coupled receptor V1-like 3 215092919 215298857 + 22301074;30032202 116897335 MODEL JAAIVD010000012;XM_032899091 XP_032754982 protein-coding 626089982 Cltb clathrin light chain B ENCODES a protein that exhibits peptide binding (ortholog); INVOLVED IN synaptic vesicle endocytosis (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN ciliary membrane (ortholog); clathrin coat (ortholog); cytosol (ortholog) 14 72934987 72952666 - 22301074;30032202 116883347 MODEL JAAIVD010000009;XM_032884426;XM_032884427 XP_032740317;XP_032740318 protein-coding 626089995 LOC116904304 protein prune homolog 2-like 6 49319051 49320037 - 116904304 MODEL JAAIVD010000024 pseudo 626089996 Cdan1 codanin 1 INVOLVED IN chromatin organization (ortholog); import into nucleus (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH congenital dyserythropoietic anemia (ortholog); congenital dyserythropoietic anemia type I (ortholog); congenital dyserythropoietic anemia type Ia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endomembrane system (ortholog) 5 98846663 98860348 - 30032202 116901845 MODEL JAAIVD010000023;XM_032904029;XM_032904030;XM_032904031;XM_032904033;XM_032904034 XP_032759920;XP_032759921;XP_032759922;XP_032759924;XP_032759925 codanin-1 protein-coding 626090038 LOC116888974 elongin-B-like X 9173441 9173865 + 116888974 MODEL JAAIVD010000014 pseudo 626090039 Arpp21 cAMP regulated phosphoprotein 21 INVOLVED IN cellular response to heat (ortholog); ASSOCIATED WITH Monomelic Amyotrophy (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog) 8 103022290 103140152 - 22301074;30032202 116907735 MODEL JAAIVD010000027;XM_032910862;XM_032910863;XM_032910864;XM_032910865;XM_032910866;XM_032910867;XM_032910868;XM_032910869;XM_032910870;XM_032910871;XM_032910873;XM_032910874;XM_032910875 XP_032766753;XP_032766754;XP_032766755;XP_032766756;XP_032766757;XP_032766758;XP_032766759;XP_032766760;XP_032766761;XP_032766762;XP_032766764;XP_032766765;XP_032766766 cAMP-regulated phosphoprotein 21 protein-coding 626090095 Shld2 shieldin complex subunit 2 INVOLVED IN negative regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of double-strand break repair via nonhomologous end joining (ortholog); positive regulation of isotype switching (ortholog); FOUND IN actin cytoskeleton (ortholog); chromosome (ortholog); nucleoplasm (ortholog) 13 9995518 10028381 - 30032202 116914838 MODEL JAAIVD010000008;XM_032919293 XP_032775184 protein-coding 626090107 LOC116894087 olfactory receptor 52K1-like 2 103235582 103236526 - 22301074 116894087 MODEL JAAIVD010000001;XM_032895808 XP_032751699 protein-coding 626090110 LOC116898513 reticulocalbin-1-like 4 132803539 132806506 - 116898513 MODEL JAAIVD010000003 pseudo 626090111 LOC116892827 actin, cytoplasmic 2-like 2 191369605 191371516 - 116892827 MODEL JAAIVD010000001;XR_004386973 pseudo 626090114 Mdh1b malate dehydrogenase 1B 4 137650864 137690355 - 30032202 116899447 MODEL JAAIVD010000003;XM_032901218 XP_032757109 putative malate dehydrogenase 1B protein-coding 626090129 Seh1l SEH1 like nucleoporin INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH tooth agenesis (ortholog); FOUND IN GATOR2 complex (ortholog); kinetochore (ortholog); lysosomal membrane (ortholog) 15 63471006 63493842 - 22301074;30032202 116885013 MODEL JAAIVD010000010;XM_032886251;XM_032886252;XM_032886253 XP_032742142;XP_032742143;XP_032742144 nucleoporin SEH1 protein-coding 626090147 Znf697 zinc finger protein 697 ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN response to type II interferon (ortholog); FOUND IN nucleus (ortholog) 3 58907631 58913831 - 30032202 116896479 MODEL JAAIVD010000012;XM_032897644 XP_032753535 protein-coding 626090153 LOC116908326 U6 spliceosomal RNA 8 46606196 46606298 - 116908326 MODEL JAAIVD010000027;XR_004388883 snrna 626090156 Derl1 derlin 1 ENCODES a protein that exhibits ATPase binding (ortholog); identical protein binding (ortholog); MHC class I protein binding (ortholog); INVOLVED IN cellular response to misfolded protein (ortholog); cellular response to unfolded protein (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); Derlin-1-VIMP complex (ortholog); early endosome (ortholog) 1 232196401 232219033 - 30032202 116911660 MODEL JAAIVD010000025;XM_032915617 XP_032771508 derlin-1 protein-coding 626090168 LOC116905577 40S ribosomal protein S18-like 7 120408321 120417872 - 116905577 MODEL JAAIVD010000026 pseudo 626090169 Rasef RAS and EF-hand domain containing ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); identical protein binding (ortholog); INVOLVED IN zymogen granule exocytosis (ortholog); FOUND IN cytosol (ortholog); endolysosome (ortholog); perinuclear region of cytoplasm (ortholog) 1 79641965 79709147 + 22301074 116901121 MODEL JAAIVD010000025;XM_032902702 XP_032758593 ras and EF-hand domain-containing protein protein-coding 626090190 Psmg4 proteasome assembly chaperone 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); FOUND IN protein-containing complex (ortholog) 14 52726798 52735345 + 22301074;30032202 116883337 MODEL JAAIVD010000009;XM_032884408;XM_032884410 XP_032740299;XP_032740301 protein-coding 626090202 LOC116903057 taste receptor type 2 member 113 6 15857431 15858360 + 22301074;30032202 116903057 MODEL JAAIVD010000024;XM_032905356 XP_032761247 protein-coding 626090205 Crebl2 cAMP responsive element binding protein like 2 INVOLVED IN positive regulation of D-glucose import (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of fat cell differentiation (ortholog); FOUND IN nucleus (ortholog) 6 14583845 14607574 - 22301074;30032202 116903168 MODEL JAAIVD010000024;XM_032905538 XP_032761429 cAMP-responsive element-binding protein-like 2 protein-coding 626090214 LOC116911537 leucine-rich repeat-containing G-protein coupled receptor 6 10 711400 723046 + 22301074 116911537 MODEL JAAIVD010000005;XM_032915526 XP_032771417 protein-coding 626090222 LOC116913848 H/ACA ribonucleoprotein complex subunit 3-like 12 59212141 59212364 - 22301074;30032202 116913848 MODEL JAAIVD010000007;XM_032918153 XP_032774044 protein-coding 626090226 Cbx5 chromobox 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN chromocenter (ortholog); chromosome, telomeric region (ortholog); heterochromatin (ortholog) 1 259843643 259885976 + 22301074;30032202 116883271 MODEL JAAIVD010000025;XM_032884262;XM_032884271;XM_032884278;XM_032884283 XP_032740153;XP_032740162;XP_032740169;XP_032740174 chromobox protein homolog 5 protein-coding 626090247 LOC116890404 U6 spliceosomal RNA 1 189056999 189057102 - 116890404 MODEL JAAIVD010000025;XR_004386606 snrna 626090250 LOC116908400 small nucleolar RNA SNORA17 8 21485147 21485274 - 116908400 MODEL JAAIVD010000027;XR_004388944 snorna 626090253 Dstn destrin, actin depolymerizing factor ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament fragmentation (ortholog); cell motility (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); Animal Disease Models (ortholog); congestive heart failure (ortholog); FOUND IN cortical actin cytoskeleton (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 5 123570808 123597321 + 22301074;30032202 116902037 MODEL JAAIVD010000023;XM_032904321 XP_032760212 destrin protein-coding 626090261 LOC116915183 small nucleolar RNA SNORA70 13 25899271 25899404 + 116915183 MODEL JAAIVD010000008;XR_004389842 snorna 626090264 LOC116905786 coiled-coil domain-containing protein 170-like 7 90367870 90405711 - 116905786 MODEL JAAIVD010000026;XM_032908763 XP_032764654 protein-coding 626090275 LOC116913449 40S ribosomal protein S29-like 12 48532974 48533144 - 30032202 116913449 MODEL JAAIVD010000007;XM_032917649 XP_032773540 protein-coding 626090278 LOC116904737 small nucleolar RNA SNORA17 6 19681195 19681327 + 116904737 MODEL JAAIVD010000024;XR_004388426 snorna 626090281 LOC116890357 U6 spliceosomal RNA 1 13415240 13415325 - 116890357 MODEL JAAIVD010000025 pseudo 626090282 LOC116909571 olfactory receptor 2T5-like 9 39642840 39643801 + 116909571 MODEL JAAIVD010000002 pseudo 626090283 LOC116897774 60S ribosomal protein L37-like 4 2496767 2497070 - 116897774 MODEL JAAIVD010000003 pseudo 626090284 LOC116911527 ubiquitin-conjugating enzyme E2 G1-like 10 33866796 33867738 - 116911527 MODEL JAAIVD010000005 pseudo 626090285 Pm20d1 peptidase M20 domain containing 1 ENCODES a protein that exhibits hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); amide biosynthetic process (ortholog); amide catabolic process (ortholog); FOUND IN extracellular space (ortholog) 10 4018351 4040039 - 30032202 116911659 MODEL JAAIVD010000005;XM_032915615 XP_032771506 N-fatty-acyl-amino acid synthase/hydrolase PM20D1 protein-coding 626090302 Dpy19l1 dpy-19 like C-mannosyltransferase 1 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN protein C-linked glycosylation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 20413059 20501810 - 22301074;30032202 116906686 MODEL JAAIVD010000027;XM_032909477 XP_032765368 probable C-mannosyltransferase DPY19L1 protein-coding 626090328 Plekhf1 pleckstrin homology and FYVE domain containing 1 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN endosome organization (ortholog); positive regulation of autophagy (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN endosome (ortholog); lysosome (ortholog) 2 160417988 160425609 + 22301074;30032202 116892251 MODEL JAAIVD010000001;XM_032893822 XP_032749713 pleckstrin homology domain-containing family F member 1 protein-coding 626090334 LOC116889111 dephospho-CoA kinase domain-containing protein X 18938614 18940245 - 22301074;30032202 116889111 MODEL JAAIVD010000014;XM_032890276 XP_032746167 protein-coding 626090339 LOC116886843 DNA repair protein SWI5 homolog 1 25434414 25434752 + 116886843 MODEL JAAIVD010000025 pseudo 626090340 Upf1 UPF1 RNA helicase and ATPase ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); chromatin binding (ortholog); double-stranded DNA helicase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cell cycle phase transition (ortholog); DNA repair (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disease (ortholog); Hypertelorism (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); cytosol (ortholog) 13 12588246 12609165 - 22301074;30032202 116914250 MODEL JAAIVD010000008;XM_032918459;XM_032918460 XP_032774350;XP_032774351 regulator of nonsense transcripts 1 protein-coding 626090372 Sh3gl3 SH3 domain containing GRB2 like 3, endophilin A3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of clathrin-dependent endocytosis (ortholog); positive regulation of neuron differentiation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); early endosome (ortholog) 2 117979851 118104337 - 22301074;30032202 116891892 MODEL JAAIVD010000001;XM_032893302;XM_032893303;XM_032893304;XM_032893305 XP_032749193;XP_032749194;XP_032749195;XP_032749196 endophilin-A3 protein-coding 626090397 Dtx3l deltex E3 ubiquitin ligase 3L ENCODES a protein that exhibits enzyme binding (ortholog); enzyme inhibitor activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 4 20706455 20713716 - 30032202 116897861 MODEL JAAIVD010000003;XM_032899268 XP_032755159 E3 ubiquitin-protein ligase DTX3L protein-coding 626090406 Smim29 small integral membrane protein 29 18 6284527 6286689 + 116887061 MODEL JAAIVD010000013;XM_032888555;XM_032888556;XM_032888557 XP_032744446;XP_032744447;XP_032744448 protein-coding 626090421 LOC116897953 olfactory receptor 5AC1-like 4 43154130 43155050 + 22301074;30032202 116897953 MODEL JAAIVD010000003;XM_032899352 XP_032755243 protein-coding 626090424 Xirp1 xin actin binding repeat containing 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin filament organization (ortholog); cardiac muscle cell development (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH hypertrophic cardiomyopathy (ortholog); microcephaly (ortholog); Poisoning (ortholog); FOUND IN adherens junction (ortholog); fascia adherens (ortholog); focal adhesion (ortholog) 8 111257033 111262483 - 22301074;30032202 116907477 MODEL JAAIVD010000027;XM_032910464 XP_032766355 xin actin-binding repeat-containing protein 1 protein-coding 626090427 Smyd1 SET and MYND domain containing 1 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); heart development (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 74229276 74277852 - 22301074;30032202 116903679 MODEL JAAIVD010000024;XM_032906339;XM_032906340 XP_032762230;XP_032762231 histone-lysine N-methyltransferase SMYD1 protein-coding 626090443 Tsku tsukushi, small leucine rich proteoglycan ENCODES a protein that exhibits transforming growth factor beta binding (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); camera-type eye development (ortholog); cholesterol efflux (ortholog); FOUND IN extracellular space (ortholog) 2 96635336 96646503 - 22301074 116891713 MODEL JAAIVD010000001;XM_032892986;XM_032892987;XM_032892989;XM_032892990;XM_032892991;XM_032892992 XP_032748877;XP_032748878;XP_032748880;XP_032748881;XP_032748882;XP_032748883 tsukushin protein-coding 626090464 Id2 inhibitor of DNA binding 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN adipose tissue development (ortholog); adult locomotory behavior (ortholog); bundle of His development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 38690776 38693169 - 22301074;30032202 116904921 MODEL JAAIVD010000026;XM_032907547 XP_032763438 DNA-binding protein inhibitor ID-2 protein-coding 626090471 LOC116913652 RING finger and CHY zinc finger domain-containing protein 1-like 12 24979715 24980501 - 116913652 MODEL JAAIVD010000007 pseudo 626090472 LOC116893177 igE-binding protein-like 2 103393646 103394366 + 116893177 MODEL JAAIVD010000001 pseudo 626090473 Cidea cell death inducing DFFA like effector a ENCODES a protein that exhibits lipid transfer activity (ortholog); phosphatidic acid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cold (ortholog); fat cell differentiation (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); lipid droplet (ortholog); mitochondrial envelope (ortholog) 15 63921804 63947613 - 22301074;30032202 116884513 MODEL JAAIVD010000010;XM_032885642 XP_032741533 cell death activator CIDE-A protein-coding 626090482 Niban2 niban apoptosis regulator 2 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN gonadotropin secretion (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN adherens junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 2707490 2756425 - 116901127 MODEL JAAIVD010000023;XM_032902719 XP_032758610 protein Niban 2 protein-coding 626090500 Hgh1 HGH1 cochaperone 1 248702816 248705598 + 116913137 MODEL JAAIVD010000025;XM_032917343 XP_032773234 HGH1 homolog;protein HGH1 homolog protein-coding 626090510 LOC116911974 small nuclear ribonucleoprotein G-like 11 37090584 37090872 - 22301074;30032202 116911974 MODEL JAAIVD010000006;XM_032915891 XP_032771782 protein-coding 626090514 Morn5 MORN repeat containing 5 FOUND IN sperm flagellum (ortholog) 5 13400813 13428375 - 116901344 MODEL JAAIVD010000023;XM_032903179;XM_032903180 XP_032759070;XP_032759071 MORN repeat-containing protein 5 protein-coding 626090526 LOC116891347 heat shock cognate 71 kDa protein-like 2 61336695 61338743 - 116891347 MODEL JAAIVD010000001 pseudo 626090527 LOC116883955 ZZ-type zinc finger-containing protein 3-like 14 20443368 20444849 - 116883955 MODEL JAAIVD010000009 pseudo 626090528 LOC116912618 DNA-directed RNA polymerase III subunit RPC6-like 11 60105038 60108359 + 116912618 MODEL JAAIVD010000006 pseudo 626090529 LOC116889881 olfactory receptor 10H1-like 1 157747258 157748214 - 22301074 116889881 MODEL JAAIVD010000025;XM_032890705 XP_032746596 protein-coding 626090532 Slx9 SLX9 ribosome biogenesis factor 18 825561 854411 - 22301074 116887197 MODEL JAAIVD010000013;XM_032888754 XP_032744645 Fam207a family with sequence similarity 207 member A;protein FAM207A protein-coding 626090542 LOC116906181 serpin B5-like 7 109316270 109316880 - 116906181 MODEL JAAIVD010000026 pseudo 626090543 Taf1 TATA-box binding protein associated factor 1 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); DNA binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN cellular response to ATP (ortholog); cellular response to UV (ortholog); DNA damage response (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); congenital heart disease (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) X 58906630 59003820 - 22301074;30032202 116888275 MODEL JAAIVD010000014;XM_032889549 XP_032745440 transcription initiation factor TFIID subunit 1 protein-coding 626090587 Stub1 STIP1 homology and U-box containing protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); G protein-coupled receptor binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to hypoxia (ortholog); cellular response to misfolded protein (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 16 (ortholog); cerebellar ataxia type 48 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 9 3096165 3099257 - 30032202 116908689 MODEL JAAIVD010000002;XM_032912003 XP_032767894 E3 ubiquitin-protein ligase CHIP protein-coding 626090598 LOC116904734 small nucleolar RNA SNORA17 6 126624024 126624140 - 116904734 MODEL JAAIVD010000024 pseudo 626090599 LOC116884927 heat shock cognate 71 kDa protein-like 15 13204270 13206192 - 116884927 MODEL JAAIVD010000010 pseudo 626090600 Synm synemin ENCODES a protein that exhibits intermediate filament binding (ortholog); structural constituent of cytoskeleton (ortholog); structural constituent of muscle (ortholog); INVOLVED IN fast-twitch skeletal muscle fiber contraction (ortholog); FOUND IN costamere (ortholog); intermediate filament (ortholog); intermediate filament cytoskeleton (ortholog) 2 132578005 132607259 + 30032202 116891979 MODEL JAAIVD010000001;XM_032893422 XP_032749313 protein-coding 626090608 Alas1 5'-aminolevulinate synthase 1 ENCODES a protein that exhibits 5-aminolevulinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); porphyria (ortholog); pulmonary hypertension (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 8 97540805 97554397 - 22301074;30032202 116907466 MODEL JAAIVD010000027;XM_032910450 XP_032766341 5-aminolevulinate synthase, nonspecific, mitochondrial protein-coding 626090623 Klhl30 kelch like family member 30 4 163347498 163358052 + 22301074 116898265 MODEL JAAIVD010000003;XM_032899619 XP_032755510 kelch-like protein 30 protein-coding 626090635 Gfi1 growth factor independent 1 transcriptional repressor ENCODES a protein that exhibits DNA-binding transcription repressor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN cell fate commitment (ortholog); cellular response to lipopolysaccharide (ortholog); DNA damage response (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Gastro-Enteropancreatic Neuroendocrine Tumor (ortholog); leukemia (ortholog); FOUND IN nuclear body (ortholog); nuclear matrix (ortholog); nucleus (ortholog) 11 17485285 17498525 - 30032202 116912762 MODEL JAAIVD010000006;XM_032916911;XM_032916912;XM_032916913 XP_032772802;XP_032772803;XP_032772804 zinc finger protein Gfi-1 protein-coding 626090654 LOC116902483 U6 spliceosomal RNA 5 78680179 78680283 + 116902483 MODEL JAAIVD010000023;XR_004388099 snrna 626090657 Plod2 procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 ENCODES a protein that exhibits procollagen glucosyltransferase activity (ortholog); procollagen-lysine 5-dioxygenase activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); hydroxylysine biosynthetic process (ortholog); peptidyl-lysine hydroxylation (ortholog); ASSOCIATED WITH Bone Neoplasms (ortholog); Bruck syndrome (ortholog); Bruck Syndrome 2 (ortholog) 8 84224657 84293955 + 22301074;30032202 116907617 MODEL JAAIVD010000027;XM_032910672;XM_032910673 XP_032766563;XP_032766564 protein-coding 626090682 Dbx1 developing brain homeobox 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ventral spinal cord interneuron specification (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog) 2 150200209 150204602 + 22301074;30032202 116894319 MODEL JAAIVD010000001;XM_032896011 XP_032751902 homeobox protein DBX1 protein-coding 626090688 Nfic nuclear factor I C ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); odontogenesis of dentin-containing tooth (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog) 1 153459314 153491019 + 22301074;30032202 116904269 MODEL JAAIVD010000025;XM_032907216;XM_032907217;XM_032907218 XP_032763107;XP_032763108;XP_032763109 nuclear factor 1 C-type protein-coding 626090707 LOC116887538 SNW domain-containing protein 1-like 1 223592037 223593043 - 116887538 MODEL JAAIVD010000025 pseudo 626090708 LOC116904055 cystic fibrosis transmembrane conductance regulator-like 6 120732811 120792463 - 22301074;30032202 116904055 MODEL JAAIVD010000024;XM_032906914 XP_032762805 protein-coding 626090718 Trpv6 transient receptor potential cation channel subfamily V member 6 ENCODES a protein that exhibits calcium channel activity (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import (ortholog); calcium ion import across plasma membrane (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); gestational diabetes (ortholog); hyperparathyroidism (ortholog); FOUND IN calcium channel complex (ortholog); plasma membrane (ortholog) 6 98976937 98992516 + 22301074;30032202 116903912 MODEL JAAIVD010000024;XM_032906677 XP_032762568 protein-coding 626090737 Rnf182 ring finger protein 182 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 14 62624807 62672044 + 116883943 MODEL JAAIVD010000009;XM_032885192;XM_032885193 XP_032741083;XP_032741084 E3 ubiquitin-protein ligase RNF182 protein-coding 626090746 Mmp19 matrix metallopeptidase 19 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN luteolysis (ortholog); ovarian follicle development (ortholog); ovulation from ovarian follicle (ortholog); ASSOCIATED WITH Cavitary Optic Disc Anomalies (ortholog); COVID-19 (ortholog); interstitial lung disease 2 (ortholog) 1 156265109 156273343 + 22301074;30032202 116906529 MODEL JAAIVD010000025;XM_032909229;XM_032909236 XP_032765120;XP_032765127 matrix metalloproteinase-19 protein-coding 626090762 LOC116890453 small nucleolar RNA SNORD38 1 40778490 40778557 - 116890453 MODEL JAAIVD010000025;XR_004386645 snorna 626090765 Cdc37l1 cell division cycle 37 like 1, HSP90 cochaperone FOUND IN cytoplasm (ortholog); cytosol (ortholog) 2 29053448 29082314 + 30032202 116891070 MODEL JAAIVD010000001;XM_032891775 XP_032747666 cell division cycle 37 like 1;hsp90 co-chaperone Cdc37-like 1 protein-coding 626090776 Polm DNA polymerase mu INVOLVED IN B cell differentiation (ortholog); somatic hypermutation of immunoglobulin genes (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair 11 74787342 74796502 - 22301074;30032202 116912601 MODEL JAAIVD010000006;XM_032916724 XP_032772615 DNA-directed DNA/RNA polymerase mu protein-coding 626090791 Heca hdc homolog, cell cycle regulator INVOLVED IN negative regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 218954110 218999689 + 116892993 MODEL JAAIVD010000001;XM_032894957 XP_032750848 headcase protein homolog protein-coding 626090799 LOC116913404 RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like 12 1007632 1008375 + 116913404 MODEL JAAIVD010000007 pseudo 626090800 LOC116903717 7,8-dihydro-8-oxoguanine triphosphatase-like 6 77701473 77701835 + 116903717 MODEL JAAIVD010000024 pseudo 626090801 LOC116883830 ankyrin repeat domain-containing protein 7-like 14 1378952 1386583 - 22301074 116883830 MODEL JAAIVD010000009;XM_032885090 XP_032740981 protein-coding 626090809 LOC116883922 ATP-dependent RNA helicase DDX39A-like 14 5483426 5560081 + 116883922 MODEL JAAIVD010000009 pseudo 626090810 Camp cathelicidin antimicrobial peptide INVOLVED IN amyloid fibril formation (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to butyrate (ortholog); ASSOCIATED WITH COVID-19 (ortholog); dentin caries (ortholog); Erythema (ortholog); FOUND IN cell projection (ortholog); extracellular space (ortholog); specific granule (ortholog) 8 100463186 100465024 - 22301074;30032202 116907646 MODEL JAAIVD010000027;XM_032910715 XP_032766606 protein-coding 626090818 Clcn2 chloride voltage-gated channel 2 ENCODES a protein that exhibits chloride channel regulator activity (ortholog); voltage-gated chloride channel activity (ortholog); voltage-gated monoatomic anion channel activity (ortholog); INVOLVED IN acinar cell differentiation (ortholog); cell differentiation involved in salivary gland development (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebral palsy (ortholog); cystic fibrosis (ortholog); FOUND IN astrocyte end-foot (ortholog); axon initial segment (ortholog); basolateral plasma membrane (ortholog) 4 5523848 5538494 - 22301074;30032202 116898702 MODEL JAAIVD010000003;XM_032899973;XR_004387653 XP_032755864 chloride channel protein 2 protein-coding 626090850 Vegfb vascular endothelial growth factor B ENCODES a protein that exhibits chemoattractant activity (ortholog); identical protein binding (ortholog); vascular endothelial growth factor receptor 1 binding (ortholog); INVOLVED IN angiogenesis (ortholog); cardiac muscle contraction (ortholog); coronary vasculature development (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Breast Neoplasms (ortholog); Choroidal Neovascularization (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 2 808187 810861 + 22301074;30032202 116894809 MODEL JAAIVD010000001;XM_032896475 XP_032752366 protein-coding 626090861 LOC116898285 translationally-controlled tumor protein-like 4 168329690 168330241 + 30032202 116898285 MODEL JAAIVD010000003;XM_032899636 XP_032755527 protein-coding 626090865 LOC116892542 uncharacterized LOC116892542 2 171371051 171373693 - 116892542 MODEL JAAIVD010000001;XR_004386957 pseudo 626090868 Fzd1 frizzled class receptor 1 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN astrocyte-dopaminergic neuron signaling (ortholog); autocrine signaling (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH breast carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 6 137035457 137040064 - 30032202 116904125 MODEL JAAIVD010000024;XM_032907011 XP_032762902 frizzled-1 protein-coding 626090873 LOC116910911 uncharacterized LOC116910911 10 50479811 50484029 - 116910911 MODEL JAAIVD010000005 pseudo 626090874 Psma6 proteasome 20S subunit alpha 6 ENCODES a protein that exhibits NF-kappaB binding (ortholog); RNA binding (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteolysis involved in protein catabolic process (ortholog); regulation of inflammatory response (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); myocardial infarction (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 7 68625305 68642720 + 22301074;30032202 116905060 MODEL JAAIVD010000026;XM_032907753 XP_032763644 proteasome subunit alpha type-6 protein-coding 626090885 Tepsin TEPSIN adaptor related protein complex 4 accessory protein ENCODES a protein that exhibits protein-containing complex binding (ortholog); FOUND IN AP-4 adaptor complex (ortholog); coated vesicle membrane (ortholog); cytoplasm (ortholog) 9 63915566 63922611 + 30032202 116910215 MODEL JAAIVD010000002;XM_032914102 XP_032769993 AP-4 complex accessory subunit tepsin protein-coding 626090902 LOC116892057 vomeronasal type-1 receptor 4-like 2 143644608 143645528 + 22301074;30032202 116892057 MODEL JAAIVD010000001;XM_032893526 XP_032749417 protein-coding 626090906 Pcbd1 pterin-4 alpha-carbinolamine dehydratase 1 ENCODES a protein that exhibits 4-alpha-hydroxytetrahydrobiopterin dehydratase activity (ortholog); identical protein binding (ortholog); phenylalanine 4-monooxygenase activity (ortholog); INVOLVED IN L-phenylalanine metabolic process (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); BH4-deficient hyperphenylalaninemia D (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 26923749 26930589 + 22301074;30032202 116887399 MODEL JAAIVD010000013;XM_032888992 XP_032744883 pterin-4-alpha-carbinolamine dehydratase protein-coding 626090915 Dlg4 discs large MAGUK scaffold protein 4 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); beta-2 adrenergic receptor binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); cellular response to potassium ion (ortholog); cerebral cortex development (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cell junction (ortholog); cell periphery (ortholog) 9 49624765 49650822 + 22301074;30032202 116910245 MODEL JAAIVD010000002;XM_032914132;XM_032914133;XM_032914134 XP_032770023;XP_032770024;XP_032770025 disks large homolog 4 protein-coding 626090945 LOC116911996 PRAME family member 20-like 11 48677097 48679755 + 22301074;30032202 116911996 MODEL JAAIVD010000006;XM_032915902 XP_032771793 protein-coding 626090950 Lemd3 LEM domain containing 3 INVOLVED IN angiogenesis (ortholog); blood vessel endothelial cell migration involved in intussusceptive angiogenesis (ortholog); negative regulation of activin receptor signaling pathway (ortholog); ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); Buschke-Ollendorff syndrome (ortholog); Familial Cutaneous Collagenoma (ortholog); FOUND IN membrane (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 1 198924326 198973869 - 30032202 116909455 MODEL JAAIVD010000025;XM_032913039 XP_032768930 inner nuclear membrane protein Man1 protein-coding 626090967 Haus1 HAUS augmin like complex subunit 1 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); HAUS complex (ortholog) 15 54335375 54348982 + 22301074;30032202 116884291 MODEL JAAIVD010000010;XM_032885389 XP_032741280 HAUS augmin-like complex subunit 1 protein-coding 626090980 LOC116900665 S-adenosylmethionine decarboxylase proenzyme-like 5 126699631 126700639 - 22301074;30032202 116900665 MODEL JAAIVD010000023;XM_032902368 XP_032758259 protein-coding 626090984 LOC116906942 olfactory receptor 7D4-like 8 16546494 16547459 - 22301074;30032202 116906942 MODEL JAAIVD010000027;XM_032909866 XP_032765757 protein-coding 626090987 Calb1 calbindin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of postsynaptic cytosolic calcium ion concentration (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN cochlea development (ortholog); learning or memory (ortholog); locomotory behavior (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); bilirubin metabolic disorder (ortholog); gestational diabetes (ortholog); FOUND IN axon (ortholog); calyx of Held (ortholog); cuticular plate (ortholog) 1 127883213 127907473 - 22301074;30032202 116903179 MODEL JAAIVD010000025;XM_032905553 XP_032761444 calbindin protein-coding 626091002 LOC116897754 TIP41-like protein 4 5599344 5600234 - 116897754 MODEL JAAIVD010000003 pseudo 626091003 LOC116893831 acyl carrier protein, mitochondrial-like 2 55993768 55994249 - 116893831 MODEL JAAIVD010000001 pseudo 626091004 LOC116902862 olfactory receptor-like protein OLF3 6 97668288 97669244 - 22301074 116902862 MODEL JAAIVD010000024;XM_032905191 XP_032761082 protein-coding 626091007 Efcab9 EF-hand calcium binding domain 9 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN flagellated sperm motility (ortholog); sperm capacitation (ortholog); spermatogenesis (ortholog); FOUND IN CatSper complex (ortholog); cytoplasm (ortholog); sperm principal piece (ortholog) 9 5367145 5372470 - 30032202 116910149 MODEL JAAIVD010000002;XM_032913997 XP_032769888 EF-hand calcium-binding domain-containing protein 9 protein-coding 626091014 LOC116902053 pleiotropic regulator 1 5 124882854 124884651 - 22301074;30032202 116902053 MODEL JAAIVD010000023;XM_032904338 XP_032760229 protein-coding 626091019 Vta1 vesicle trafficking 1 INVOLVED IN multivesicular body sorting pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 222521261 222570346 + 30032202 116893004 MODEL JAAIVD010000001;XM_032894965;XM_032894966 XP_032750856;XP_032750857 vacuolar protein sorting-associated protein VTA1 homolog protein-coding 626091034 LOC116888847 transmembrane protein 126A-like X 88734807 88735360 - 116888847 MODEL JAAIVD010000014 pseudo 626091035 Kics2 KICSTOR subunit 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); negative regulation of TORC1 signaling (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 83 (ortholog); polycystic ovary syndrome (ortholog); FOUND IN intercellular bridge (ortholog); KICSTOR complex (ortholog); lysosome (ortholog) 1 200172224 200185703 + 30032202 116909543 MODEL JAAIVD010000025;XM_032913163;XM_032913169 XP_032769054;XP_032769060 C1H12orf66 KICSTOR complex protein C12orf66 homolog;chromosome 1 C12orf66 homolog protein-coding 626091048 Cnga2 cyclic nucleotide gated channel subunit alpha 2 ENCODES a protein that exhibits cGMP binding (ortholog); identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); membrane depolarization (ortholog); potassium ion transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; FOUND IN ciliary membrane (ortholog); intracellular cyclic nucleotide activated cation channel complex (ortholog); non-motile cilium membrane (ortholog) 13 207995 214638 - 22301074;30032202 116914790 MODEL JAAIVD010000008;XM_032919236 XP_032775127 cyclic nucleotide-gated olfactory channel protein-coding 626091057 LOC116906273 glyceraldehyde-3-phosphate dehydrogenase-like 7 127877861 127878837 + 116906273 MODEL JAAIVD010000026 pseudo 626091058 LOC116908541 schlafen family member 5-like 9 87558010 87568524 - 116908541 MODEL JAAIVD010000002;XM_032911742 XP_032767633 protein-coding 626091067 Tbl3 transducin beta like 3 INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); small-subunit processome (ortholog) 9 1984631 1989924 - 22301074;30032202 116909063 MODEL JAAIVD010000002;XM_032912540 XP_032768431 transducin beta-like protein 3 protein-coding 626091093 LOC116906051 60S ribosomal protein L24-like 7 46962406 46962847 + 116906051 MODEL JAAIVD010000026 pseudo 626091094 LOC116894516 vomeronasal type-1 receptor 4-like 2 174849550 174850884 + 22301074;30032202 116894516 MODEL JAAIVD010000001;XM_032896218 XP_032752109 protein-coding 626091099 Dbf4 DBF4-CDC7 kinase regulatory subunit FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 140298568 140323417 - 22301074;30032202 116904140 MODEL JAAIVD010000024;XM_032907028 XP_032762919 DBF4 zinc finger;protein DBF4 homolog A protein-coding 626091115 Ccdc27 coiled-coil domain containing 27 1 6676747 6691372 + 116886087 MODEL JAAIVD010000025;XM_032887410 XP_032743301 coiled-coil domain-containing protein 27 protein-coding 626091130 Fntb farnesyltransferase, CAAX box, subunit beta ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); geranylgeranyl diphosphate synthase activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); FOUND IN microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) 7 90967728 91053012 + 22301074;30032202 116905186 MODEL JAAIVD010000026;XM_032907974;XM_032907975 XP_032763865;XP_032763866 farnesyltransferase, CAAX box, beta;protein farnesyltransferase subunit beta protein-coding 626091149 LOC116884384 protein SPT2 homolog 15 54879885 54881023 + 116884384 MODEL JAAIVD010000010 pseudo 626091150 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 163441393 163441466 + 116895130 MODEL JAAIVD010000001 trna 626091151 Galnt3 polypeptide N-acetylgalactosaminyltransferase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); manganese ion binding (ortholog); polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN apoptotic process (ortholog); cell maturation (ortholog); chondrocyte development (ortholog); ASSOCIATED WITH calcinosis (ortholog); genetic disease (ortholog); hyperphosphatemia (ortholog); FOUND IN Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 5 43530674 43568199 - 30032202 116901465 MODEL JAAIVD010000023;XM_032903416 XP_032759307 protein-coding 626091166 Ryr3 ryanodine receptor 3 ENCODES a protein that exhibits calcium-induced calcium release activity (ortholog); intracellularly gated calcium channel activity (ortholog); ryanodine-sensitive calcium-release channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH colorectal cancer (ortholog); congenital myopathy 20 (ortholog); Contracture (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); junctional membrane complex (ortholog); perinuclear region of cytoplasm (ortholog) 5 90946160 91474771 - 22301074;30032202 116901747 MODEL JAAIVD010000023;XM_032903885;XM_032903886;XM_032903887;XR_004388016 XP_032759776;XP_032759777;XP_032759778 protein-coding 626091287 LOC116883919 calmodulin-4-like 14 18176413 18176887 + 22301074;30032202 116883919 MODEL JAAIVD010000009;XM_032885176 XP_032741067 protein-coding 626091291 LOC116898073 60S ribosomal protein L31-like 4 89109356 89109719 - 116898073 MODEL JAAIVD010000003 pseudo 626091292 Prph2 peripherin 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); photoreceptor cell outer segment organization (ortholog); protein heterooligomerization (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; ASSOCIATED WITH bestrophinopathy (ortholog); bone marrow disease (ortholog); Central Areolar Choroidal Dystrophy 2 (ortholog); FOUND IN photoreceptor outer segment (ortholog) 4 82949508 82963872 - 22301074;30032202 116898043 MODEL JAAIVD010000003;XM_032899436 XP_032755327 peripherin-2 protein-coding 626091299 Reg4 regenerating family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); heparin binding (ortholog); mannan binding (ortholog); INVOLVED IN response to bacterium (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 3 59075484 59090271 - 30032202 116896482 MODEL JAAIVD010000012;XM_032897647 XP_032753538 regenerating islet-derived protein 4 protein-coding 626091309 LOC116914043 60S ribosomal protein L21-like 12 52256435 52256909 + 116914043 MODEL JAAIVD010000007 pseudo 626091310 LOC116894221 trace amine-associated receptor 8b-like 2 106768166 106769159 + 116894221 MODEL JAAIVD010000001 pseudo 626091311 Aqp2 aquaporin 2 ENCODES a protein that exhibits actin binding (ortholog); glycerol transmembrane transporter activity (ortholog); PDZ domain binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); diabetes insipidus (ortholog); diabetic ketoacidosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); clathrin-coated vesicle (ortholog) 1 272386825 272391867 + 22301074;30032202 116890250 MODEL JAAIVD010000025;XM_032890976 XP_032746867 aquaporin-2 protein-coding 626091319 LOC116887030 histone deacetylase 2 18 37034785 37058189 + 22301074 116887030 MODEL JAAIVD010000013;XM_032888522 XP_032744413 protein-coding 626091337 Rpl34 ribosomal protein L34 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 3 28133396 28137117 + 22301074;2721685;30032202 116896245 MODEL JAAIVD010000012;X14401;XM_032897312;XM_032897313 CAA32574;XP_032753203;XP_032753204 60S ribosomal protein L34 protein-coding 626091349 Gpr107 G protein-coupled receptor 107 ENCODES a protein that exhibits clathrin heavy chain binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) 5 4414259 4475108 - 22301074;30032202 116901167 MODEL JAAIVD010000023;XM_032902815 XP_032758706 protein GPR107 protein-coding 626091371 Zfta zinc finger translocation associated FOUND IN nucleus (ortholog) 2 358311 367112 - 30032202 116894792 MODEL JAAIVD010000001;XM_032896444;XM_032896445 XP_032752335;XP_032752336 C2H11orf95 chromosome 2 C11orf95 homolog;uncharacterized protein C11orf95 homolog protein-coding 626091382 LOC116897493 small nucleolar RNA SNORD45 3 7540699 7540773 + 116897493 MODEL JAAIVD010000012;XR_004387514 snorna 626091385 Spg7 SPG7 matrix AAA peptidase subunit, paraplegin ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); mitochondrial outer membrane permeabilization involved in programmed cell death (ortholog); regulation of calcium import into the mitochondrion (ortholog); ASSOCIATED WITH Dysarthria (ortholog); epilepsy (ortholog); frontotemporal dementia and/or amyotrophic lateral sclerosis 2 (ortholog); FOUND IN m-AAA complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial permeability transition pore complex (ortholog) 17 42686107 42720979 + 22301074;30032202 116886136 MODEL JAAIVD010000011;XM_032887486 XP_032743377 paraplegin protein-coding 626091406 LOC116893593 PRELI domain-containing protein 1, mitochondrial-like 2 1063673 1064667 + 30032202 116893593 MODEL JAAIVD010000001;XM_032895292 XP_032751183 protein-coding 626091412 Lrrk1 leucine rich repeat kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN bone resorption (ortholog); osteoclast development (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteopetrosis (ortholog); osteosclerotic metaphyseal dysplasia (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 2 133969526 134095574 + 22301074 116891994 MODEL JAAIVD010000001;XM_032893448 XP_032749339 leucine-rich repeat serine/threonine-protein kinase 1 protein-coding 626091449 Ube4a ubiquitination factor E4A ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-ubiquitin ligase activity (ortholog); INVOLVED IN protein polyubiquitination (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA AND GROSS MOTOR AND SPEECH DELAY (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog) 8 39458596 39500964 - 22301074;30032202 116908149 MODEL JAAIVD010000027;XM_032911447;XM_032911449;XM_032911450 XP_032767338;XP_032767340;XP_032767341 ubiquitin conjugation factor E4 A protein-coding 626091481 LOC116892113 uncharacterized LOC116892113 1 6207757 6208659 - 116892113 MODEL JAAIVD010000025;XR_004386913 ncrna 626091485 LOC116906006 uncharacterized LOC116906006 7 23490351 23494628 + 116906006 MODEL JAAIVD010000026;XR_004388583 ncrna 626091489 LOC116887101 keratin-associated protein 10-9-like 18 1167319 1168083 + 22301074;30032202 116887101 MODEL JAAIVD010000013;XM_032888629;XM_032888630;XM_032888631;XM_032888632 XP_032744520;XP_032744521;XP_032744522;XP_032744523 keratin-associated protein 10-10-like;keratin-associated protein 10-7-like;keratin-associated protein 10-8-like protein-coding 626091501 LOC116890591 small nucleolar RNA SNORA17 1 216642478 216642594 + 116890591 MODEL JAAIVD010000025 pseudo 626091502 Mapk1ip1l mitogen-activated protein kinase 1 interacting protein 1 like 12 75738096 75743595 - 116913128 MODEL JAAIVD010000007;XM_032917291 XP_032773182 MAPK-interacting and spindle-stabilizing protein-like protein-coding 626091508 Col25a1 collagen type XXV alpha 1 chain ENCODES a protein that exhibits amyloid-beta binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis involved in innervation (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); congenital fibrosis of the extraocular muscles 5 (ortholog); genetic disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 3 28723333 29117447 - 116896257 MODEL JAAIVD010000012;XM_032897332 XP_032753223 collagen alpha-1(XXV) chain protein-coding 626091550 Tspyl5 TSPY like 5 INVOLVED IN cellular response to gamma radiation (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog) 1 207462197 207464671 - 22301074;30032202 116910411 MODEL JAAIVD010000025;XM_032914259 XP_032770150 testis-specific Y-encoded-like protein 5 protein-coding 626091555 LOC116902490 U6 spliceosomal RNA 5 89567585 89567682 + 116902490 MODEL JAAIVD010000023 pseudo 626091556 Matcap1 microtubule associated tyrosine carboxypeptidase 1 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); tubulin-tyrosine carboxypeptidase (ortholog); INVOLVED IN brain development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN microtubule (ortholog) 17 25008286 25016482 - 116886370 MODEL JAAIVD010000011;XM_032887832;XM_032887833;XM_032887834 XP_032743723;XP_032743724;XP_032743725 Kiaa0895l KIAA0895 like;uncharacterized protein KIAA0895-like homolog protein-coding 626091572 Ecd ecdysoneless cell cycle regulator ENCODES a protein that exhibits histone acetyltransferase binding (ortholog); INVOLVED IN fibroblast proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of G1/S transition of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 12 90113758 90144421 - 30032202 116914070 MODEL JAAIVD010000007;XM_032918376 XP_032774267 protein ecdysoneless homolog protein-coding 626091590 Tab3 TGF-beta activated kinase 1 (MAP3K7) binding protein 3 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); molecular adaptor activity (ortholog); zinc ion binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to bacterium (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH rheumatoid arthritis (ortholog); systemic lupus erythematosus (ortholog); FOUND IN endoplasmic reticulum (ortholog) X 79870398 79890592 + 22301074;30032202 116888519 MODEL JAAIVD010000014;XM_032889819 XP_032745710 TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 protein-coding 626091601 LOC116913846 40S ribosomal protein S23-like 12 54835703 54849598 + 116913846 MODEL JAAIVD010000007 pseudo 626091602 Samd3 sterile alpha motif domain containing 3 2 212254618 212297820 + 22301074 116892959 MODEL JAAIVD010000001;XM_032894909 XP_032750800 sterile alpha motif domain-containing protein 3 protein-coding 626091618 Ankrd55 ankyrin repeat domain 55 ASSOCIATED WITH Chloracne (ortholog); rheumatoid arthritis (ortholog) 3 184674538 184772644 - 22301074;30032202 116897194 MODEL JAAIVD010000012;XM_032898894;XM_032898895;XM_032898896 XP_032754785;XP_032754786;XP_032754787 ankyrin repeat domain-containing protein 55 protein-coding 626091641 LOC116911799 coiled-coil domain-containing protein 28A-like 10 94202745 94203511 - 116911799 MODEL JAAIVD010000005 pseudo 626091642 Oat ornithine aminotransferase ENCODES a protein that exhibits identical protein binding (ortholog); ornithine aminotransferase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 69264360 69283918 + 22301074;30032202 116891396 MODEL JAAIVD010000001;XM_032892420 XP_032748311 ornithine aminotransferase, mitochondrial protein-coding 626091656 Eif3k eukaryotic translation initiation factor 3 subunit K ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) 2 167021221 167031519 + 22301074;30032202 116892366 MODEL JAAIVD010000001;XM_032894025 XP_032749916 protein-coding 626091668 Scn10a sodium voltage-gated channel alpha subunit 10 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated sodium channel activity (ortholog); INVOLVED IN AV node cell action potential (ortholog); behavioral response to pain (ortholog); bundle of His cell action potential (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog); Brugada syndrome (ortholog); FOUND IN axon (ortholog); C-fiber (ortholog); clathrin complex (ortholog) 8 110850399 110963140 - 22301074;30032202 116906745 MODEL JAAIVD010000027;XM_032909574 XP_032765465 sodium channel protein type 10 subunit alpha protein-coding 626091700 Ankmy1 ankyrin repeat and MYND domain containing 1 4 164818826 164871060 - 22301074 116898580 MODEL JAAIVD010000003;XM_032899781 XP_032755672 ankyrin repeat and MYND domain-containing protein 1 protein-coding 626091721 C18H6orf89 chromosome 18 C6orf89 homolog INVOLVED IN autophagy (ortholog); chromatin remodeling (ortholog); collagen metabolic process (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); midbody (ortholog) 18 4569307 4604318 - 30032202 116886929 MODEL JAAIVD010000013;XM_032888411;XM_032888412;XM_032888413;XM_032888414 XP_032744302;XP_032744303;XP_032744304;XP_032744305 bombesin receptor-activated protein C6orf89 homolog protein-coding 626091743 Eef1akmt2 EEF1A lysine methyltransferase 2 ENCODES a protein that exhibits methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN peptidyl-lysine methylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 68994255 69018154 + 30032202 116891393 MODEL JAAIVD010000001;XM_032892411;XM_032892412;XM_032892413;XM_032892415;XM_032892416;XM_032892417 XP_032748302;XP_032748303;XP_032748304;XP_032748306;XP_032748307;XP_032748308 protein-coding 626091769 LOC116901300 uncharacterized LOC116901300 5 11720572 11722154 - 116901300 MODEL JAAIVD010000023;XR_004387975 ncrna 626091773 LOC116900366 olfactory receptor 5W2-like 5 69405357 69406304 + 22301074;30032202 116900366 MODEL JAAIVD010000023;XM_032902115 XP_032758006 protein-coding 626091777 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42436636 42436723 - 116884182 MODEL JAAIVD010000009 trna 626091778 LOC116893940 uncharacterized LOC116893940 2 89653056 89660123 + 116893940 MODEL JAAIVD010000001;XR_004387014 ncrna 626091783 LOC116888487 tubulin beta-4B chain-like X 38695052 38701157 + 116888487 MODEL JAAIVD010000014 pseudo 626091784 LOC116905683 mortality factor 4-like protein 1 7 33771913 33772887 - 116905683 MODEL JAAIVD010000026 pseudo 626091785 Antxr1 ANTXR cell adhesion molecule 1 ENCODES a protein that exhibits actin filament binding (ortholog); collagen binding (ortholog); signaling receptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); blood vessel development (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); breast cancer (ortholog); colorectal cancer (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); filopodium membrane (ortholog) 6 58983031 59177979 + 22301074 116903540 MODEL JAAIVD010000024;XM_032906154 XP_032762045 anthrax toxin receptor 1 protein-coding 626091807 Atp5mc1 ATP synthase membrane subunit c locus 1 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); proton channel activity (ortholog); INVOLVED IN cellular response to L-glutamate (ortholog); cold acclimation (ortholog); negative regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cation channel complex (ortholog); distal axon (ortholog); mitochondrion (ortholog) 9 58317205 58319905 + 22301074;30032202 116909812 MODEL JAAIVD010000002;XM_032913511;XM_032913512;XM_032913513 XP_032769402;XP_032769403;XP_032769404 ATP synthase F(0) complex subunit C1, mitochondrial protein-coding 626091822 LOC116913285 histone H2A.Z-like 12 88999046 89004056 + 116913285 MODEL JAAIVD010000007 pseudo 626091823 LOC116905585 zinc finger protein 431-like 7 1465652 1465930 - 116905585 MODEL JAAIVD010000026;XM_032908593 XP_032764484 protein-coding 626091826 Ccbe1 collagen and calcium binding EGF domains 1 ENCODES a protein that exhibits collagen binding (ortholog); protease binding (ortholog); INVOLVED IN lung development (ortholog); lymph vessel development (ortholog); lymphangiogenesis (ortholog); ASSOCIATED WITH Distal Renal Tubular Acidosis 4 with Hemolytic Anemia (ortholog); Facies (ortholog); genetic disease (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog) 15 65145212 65208975 + 22301074 116884403 MODEL JAAIVD010000010;XM_032885505 XP_032741396 collagen and calcium-binding EGF domain-containing protein 1 protein-coding 626091837 LOC116889069 ribosomal biogenesis factor-like X 24424884 24428958 - 116889069 MODEL JAAIVD010000014 pseudo 626091838 LOC116910704 U1 spliceosomal RNA 9 23914516 23914679 - 116910704 MODEL JAAIVD010000002;XR_004389231 snrna 626091841 Top6bl TOP6B like initiator of meiotic double strand breaks INVOLVED IN meiotic DNA double-strand break formation (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH Hydatidiform Mole, Recurrent, 4 (ortholog) 2 2964405 3040010 + 22301074;30032202 116890766 MODEL JAAIVD010000001;XM_032891232 XP_032747123 C2H11orf80 chromosome 2 C11orf80 homolog;type 2 DNA topoisomerase 6 subunit B-like protein-coding 626091859 Vamp7 vesicle associated membrane protein 7 ENCODES a protein that exhibits SNAP receptor activity (ortholog); syntaxin binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); calcium-ion regulated exocytosis (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); papillomavirus infectious disease (ortholog); FOUND IN apical part of cell (ortholog); azurophil granule membrane (ortholog); cell surface (ortholog) 16 15277986 15303416 + 22301074;30032202 116885149 MODEL JAAIVD010000004;XM_032886355 XP_032742246 vesicle-associated membrane protein 7 protein-coding 626091871 LOC116895815 tripartite motif-containing protein 59-like 3 72092679 72111480 + 30032202 116895815 MODEL JAAIVD010000012;XM_032896949 XP_032752840 protein-coding 626091879 Zscan2 zinc finger and SCAN domain containing 2 ASSOCIATED WITH prostate cancer (ortholog) 2 119355781 119367448 - 30032202 116891911 MODEL JAAIVD010000001;XM_032893332 XP_032749223 zinc finger and SCAN domain-containing protein 2 protein-coding 626091885 LOC116903813 C-type lectin domain family 2 member E-like 6 18417909 18420720 - 30032202 116903813 MODEL JAAIVD010000024;XM_032906517 XP_032762408 protein-coding 626091891 LOC116884031 uncharacterized LOC116884031 14 12279636 12284125 + 116884031 MODEL JAAIVD010000009;XR_004385811 ncrna 626091896 Mrs2 magnesium transporter MRS2 ENCODES a protein that exhibits magnesium ion transmembrane transporter activity (ortholog); INVOLVED IN lactate metabolic process (ortholog); mitochondrial magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 44039104 44059064 - 30032202 116883333 MODEL JAAIVD010000009;XM_032884404 XP_032740295 magnesium transporter MRS2 homolog, mitochondrial protein-coding 626091910 Eef1d eukaryotic translation elongation factor 1 delta ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); heat shock protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to ionizing radiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH chromosome 5q deletion syndrome (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 1 248214291 248228863 - 22301074;30032202 116912623 MODEL JAAIVD010000025;XM_032916745;XM_032916751;XM_032916758;XM_032916765;XM_032916771;XM_032916777;XM_032916783;XM_032916788;XM_032916794;XM_032916801;XM_032916812 XP_032772636;XP_032772642;XP_032772649;XP_032772656;XP_032772662;XP_032772668;XP_032772674;XP_032772679;XP_032772685;XP_032772692;XP_032772703 elongation factor 1-delta protein-coding 626091948 Rtp3 receptor transporter protein 3 INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); protein targeting to membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 8 101564841 101568436 - 30032202 116908109 MODEL JAAIVD010000027;XM_032911389 XP_032767280 receptor-transporting protein 3 protein-coding 626091953 Mvp major vault protein ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); ERBB signaling pathway (ortholog); negative regulation of epidermal growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); cytoskeleton (ortholog); cytosol (ortholog) 2 74878686 74906295 + 30032202 116891493 MODEL JAAIVD010000001;XM_032892599 XP_032748490 protein-coding 626091972 Il17rd interleukin 17 receptor D INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); arteriovenous malformations of the brain (ortholog); Brain Injuries (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 13 2769537 2832321 + 30032202 116914804 MODEL JAAIVD010000008;XM_032919258 XP_032775149 interleukin-17 receptor D protein-coding 626091989 Donson DNA replication fork stabilization factor DONSON INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA replication (ortholog); mitotic DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Dwarfism (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); replication fork (ortholog); replisome (ortholog) 4 52909339 52932048 + 30032202 116898989 MODEL JAAIVD010000003;XM_032900422;XM_032900423;XM_032900424;XM_032900425;XM_032900426;XM_032900427 XP_032756313;XP_032756314;XP_032756315;XP_032756316;XP_032756317;XP_032756318 protein downstream neighbor of Son protein-coding 626092015 Tpgs1 tubulin polyglutamylase complex subunit 1 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN adult behavior (ortholog); chemical synaptic transmission (ortholog); cilium disassembly (ortholog); FOUND IN centrosome (ortholog) 1 155198054 155204157 - 30032202 116905753 MODEL JAAIVD010000025;XM_032908725 XP_032764616 protein-coding 626092021 LOC116885047 small nucleolar RNA SNORA17 15 26911489 26911618 - 116885047 MODEL JAAIVD010000010;XR_004385933 snorna 626092024 Znrf2 zinc and ring finger 2 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); positive regulation of autophagosome-lysosome fusion (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog); fibrillar center (ortholog) 6 86173398 86250955 - 116903765 MODEL JAAIVD010000024;XM_032906455 XP_032762346 E3 ubiquitin-protein ligase ZNRF2 protein-coding 626092033 LOC116895357 calcium-binding mitochondrial carrier protein SCaMC-1-like 3 49166168 49211933 - 22301074;30032202 116895357 MODEL JAAIVD010000012;XM_032896655 XP_032752546 protein-coding 626092047 Traf5 TNF receptor associated factor 5 ENCODES a protein that exhibits identical protein binding (ortholog); thioesterase binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); interleukin-17-mediated signaling pathway (ortholog); mRNA stabilization (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; FOUND IN CD40 receptor complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 10 70082392 70129712 - 22301074;30032202 116911668 MODEL JAAIVD010000005;XM_032915623 XP_032771514 TNF receptor-associated factor 5 protein-coding 626092062 Pigp phosphatidylinositol glycan anchor biosynthesis class P ENCODES a protein that exhibits phosphatidylinositol N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 55 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) 4 50271190 50277328 + 22301074 116898964 MODEL JAAIVD010000003;XM_032900386;XM_032900387;XM_032900388 XP_032756277;XP_032756278;XP_032756279 phosphatidylinositol N-acetylglucosaminyltransferase subunit P protein-coding 626092079 Creb1 cAMP responsive element binding protein 1 ENCODES a protein that exhibits arrestin family protein binding (ortholog); cAMP response element binding (ortholog); DNA binding (ortholog); INVOLVED IN axonogenesis (ortholog); cAMP/PKA signal transduction (ortholog); cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; follicle-stimulating hormone signaling pathway; forkhead class A signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amnestic disorder (ortholog); FOUND IN ATF4-CREB1 transcription factor complex (ortholog); axon (ortholog); centrosome (ortholog) 4 138408778 138477114 + 22301074;30032202 116899450 MODEL JAAIVD010000003;XM_032901223;XM_032901224;XM_032901225;XM_032901226;XM_032901227;XR_004387729 XP_032757114;XP_032757115;XP_032757116;XP_032757117;XP_032757118 cyclic AMP-responsive element-binding protein 1 protein-coding 626092106 Gata2 GATA binding protein 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN cell differentiation in hindbrain (ortholog); cell fate determination (ortholog); central nervous system neuron development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); anemia (ortholog); aplastic anemia (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 58117627 58125914 - 22301074;30032202 116903527 MODEL JAAIVD010000024;XM_032906137 XP_032762028 endothelial transcription factor GATA-2 protein-coding 626092116 LOC116886005 small nucleolar RNA SNORA17 16 6657951 6658079 + 116886005 MODEL JAAIVD010000004;XR_004386077 snorna 626092119 LOC116888055 nuclear RNA export factor 2-like X 87766258 87790642 - 22301074;30032202 116888055 MODEL JAAIVD010000014;XM_032889445 XP_032745336 protein-coding 626092141 Rfx3 regulatory factor X3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell maturation (ortholog); cilium assembly (ortholog); cilium-dependent cell motility (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 2 27830062 28072129 - 22301074;30032202 116891062 MODEL JAAIVD010000001;XM_032891761;XM_032891762;XM_032891763;XM_032891764;XM_032891765;XM_032891766;XM_032891767 XP_032747652;XP_032747653;XP_032747654;XP_032747655;XP_032747656;XP_032747657;XP_032747658 transcription factor RFX3 protein-coding 626092178 LOC116890236 olfactory receptor 8S1-like 1 271187989 271188924 - 22301074 116890236 MODEL JAAIVD010000025;XM_032890965 XP_032746856 protein-coding 626092181 Spata24 spermatogenesis associated 24 ENCODES a protein that exhibits DNA binding (ortholog); identical protein binding (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); male germ cell nucleus (ortholog) 15 8713214 8721149 + 30032202 116884838 MODEL JAAIVD010000010;XM_032886075 XP_032741966 spermatogenesis-associated protein 24 protein-coding 626092191 Pmaip1 phorbol-12-myristate-13-acetate-induced protein 1 INVOLVED IN apoptotic process (ortholog); cellular response to glucose starvation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); COVID-19 (ortholog); substance-related disorder (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); cytosol (ortholog); mitochondrion (ortholog) 15 64808452 64813433 - 22301074;30032202 116884789 MODEL JAAIVD010000010;XM_032886022 XP_032741913 protein-coding 626092198 Tlcd2 TLC domain containing 2 INVOLVED IN membrane assembly (ortholog); phospholipid homeostasis (ortholog); plasma membrane organization (ortholog); FOUND IN plasma membrane (ortholog) 9 94180427 94182941 + 30032202 116909730 MODEL JAAIVD010000002;XM_032913406 XP_032769297 TLC domain-containing protein 2 protein-coding 626092206 LOC116906556 sorting nexin-19-like 8 26242047 26244380 + 22301074;30032202 116906556 MODEL JAAIVD010000027;XM_032909271 XP_032765162 protein-coding 626092212 LOC116910391 olfactory receptor 3A1-like 9 92942940 92946619 + 116910391 MODEL JAAIVD010000002 pseudo 626092213 LOC116884662 zinc finger protein 397-like 15 19873494 19880310 - 30032202 116884662 MODEL JAAIVD010000010;XM_032885831;XM_032885832;XM_032885833 XP_032741722;XP_032741723;XP_032741724 protein-coding 626092227 Luc7l3 LUC7 like 3 pre-mRNA splicing factor ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN RNA splicing (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 51214004 51244163 + 22301074;30032202 116910155 MODEL JAAIVD010000002;XM_032914010;XM_032914011;XM_032914012;XM_032914013;XM_032914014 XP_032769901;XP_032769902;XP_032769903;XP_032769904;XP_032769905 luc7-like protein 3 protein-coding 626092261 Lnpk lunapark, ER junction formation factor ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blood coagulation (ortholog); embryonic digit morphogenesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEVELOPMENTAL DISORDER WITH EPILEPSY AND HYPOPLASIA OF THE CORPUS CALLOSUM (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum tubular network membrane (ortholog) 5 51865064 51925644 - 30032202 116901527 MODEL JAAIVD010000023;XM_032903506;XM_032903507;XM_032903508;XM_032903509 XP_032759397;XP_032759398;XP_032759399;XP_032759400 endoplasmic reticulum junction formation protein lunapark protein-coding 626092286 Gpsm3 G protein signaling modulator 3 INVOLVED IN positive regulation of cytokine production involved in inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of leukocyte chemotaxis (ortholog); FOUND IN plasma membrane (ortholog) 18 7272710 7274866 + 22301074;30032202 116886824 MODEL JAAIVD010000013;XM_032888257 XP_032744148 G-protein-signaling modulator 3 protein-coding 626092294 LOC116907832 prohibitin-like 8 6395401 6396399 - 116907832 MODEL JAAIVD010000027 pseudo 626092295 Gsk3a glycogen synthase kinase 3 alpha ENCODES a protein that exhibits protein kinase A catalytic subunit binding (ortholog); protein kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN autosome genomic imprinting (ortholog); cardiac left ventricle morphogenesis (ortholog); cell migration (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; nuclear factor, erythroid 2 like 2 signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); bipolar disorder (ortholog); FOUND IN microtubule (ortholog) 2 169476084 169485866 + 22301074;30032202 116892467 MODEL JAAIVD010000001;XM_032894183;XM_032894185 XP_032750074;XP_032750076 glycogen synthase kinase-3 alpha protein-coding 626092314 LOC116900958 histone H2A.V-like 5 96738175 96740705 + 116900958 MODEL JAAIVD010000023 pseudo 626092315 Tdp2 tyrosyl-DNA phosphodiesterase 2 ENCODES a protein that exhibits 5'-tyrosyl-DNA phosphodiesterase activity (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN double-strand break repair (ortholog); neuron development (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 23 (ortholog); cerebellar ataxia (ortholog); genetic disease (ortholog); FOUND IN aggresome (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 14 43875279 43886649 + 22301074;30032202 116883775 MODEL JAAIVD010000009;XM_032885019 XP_032740910 protein-coding 626092326 Nkain3 sodium/potassium transporting ATPase interacting 3 FOUND IN membrane (ortholog) 1 122289746 122904610 + 30032202 116902973 MODEL JAAIVD010000025;XM_032905295;XM_032905301 XP_032761186;XP_032761192 sodium/potassium-transporting ATPase subunit beta-1-interacting protein 3 protein-coding 626092339 LOC116898162 40S ribosomal protein S3-like 4 120937392 120938106 - 116898162 MODEL JAAIVD010000003 pseudo 626092340 LOC116898533 receptor tyrosine-protein kinase erbB-4-like 4 142211377 142383030 - 116898533 MODEL JAAIVD010000003;XM_032899752 XP_032755643 protein-coding 626092346 LOC116906370 small nucleolar RNA SNORD113/SNORD114 family 7 127260930 127261004 + 116906370 MODEL JAAIVD010000026;XR_004388639 snorna 626092349 LOC116903693 protein O-mannosyl-transferase TMTC1-like 6 6043216 6076787 - 30032202 116903693 MODEL JAAIVD010000024;XM_032906366 XP_032762257 protein-coding 626092357 Cntn2 contactin 2 ENCODES a protein that exhibits carbohydrate binding (ortholog); cell adhesion mediator activity (ortholog); INVOLVED IN adult walking behavior (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 11 (ortholog); familial adult myoclonic epilepsy 5 (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) 10 3318355 3337720 + 30032202 116911052 MODEL JAAIVD010000005;XM_032914805 XP_032770696 contactin-2 protein-coding 626092383 LOC116906969 uncharacterized LOC116906969 8 112002910 112004364 - 116906969 MODEL JAAIVD010000027;XR_004388790 ncrna 626092387 LOC116902980 cytoskeleton-associated protein 2-like 6 133763040 133765188 - 116902980 MODEL JAAIVD010000024 pseudo 626092388 Trim26 tripartite motif containing 26 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 9806454 9829264 + 22301074;30032202 116887717 MODEL JAAIVD010000013;XM_032889315 XP_032745206 tripartite motif-containing protein 26 protein-coding 626092402 Tmem117 transmembrane protein 117 INVOLVED IN intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 1 267514870 267948102 + 30032202 116884340 MODEL JAAIVD010000025;XM_032885476 XP_032741367 protein-coding 626092413 Plekhn1 pleckstrin homology domain containing N1 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol phosphate binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); positive regulation of apoptotic process (ortholog); response to hypoxia (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); mitochondrial membrane (ortholog) 1 4440095 4448283 + 30032202 116891815 MODEL JAAIVD010000025;XM_032893176;XM_032893185 XP_032749067;XP_032749076 pleckstrin homology domain-containing family N member 1 protein-coding 626092435 LOC116883948 26S proteasome regulatory subunit 10B-like 14 17639291 17640392 - 116883948 MODEL JAAIVD010000009 pseudo 626092436 Slc7a5 solute carrier family 7 member 5 ENCODES a protein that exhibits amino acid transmembrane transporter activity (ortholog); antiporter activity (ortholog); aromatic amino acid transmembrane transporter activity (ortholog); INVOLVED IN alanine transport (ortholog); amino acid import across plasma membrane (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); FOUND IN amino acid transport complex (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 17 41523069 41550988 - 22301074;30032202 116886308 MODEL JAAIVD010000011;XM_032887750 XP_032743641 large neutral amino acids transporter small subunit 1 protein-coding 626092450 LOC116913191 uncharacterized LOC116913191 12 65128173 65130963 + 116913191 MODEL JAAIVD010000007;XM_032917384 XP_032773275 uncharacterized protein LOC116913191 protein-coding 626092455 LOC116901900 importin subunit alpha-1-like 1 126662303 126701706 + 116901900 MODEL JAAIVD010000025 pseudo 626092456 LOC116903429 uncharacterized LOC116903429 6 33824930 33826445 + 116903429 MODEL JAAIVD010000024;XR_004388277 pseudo 626092459 LOC116895470 protein phosphatase 1 regulatory subunit 3B-like 3 86031824 86032676 - 116895470 MODEL JAAIVD010000012 pseudo 626092460 C5H11orf96 chromosome 5 C11orf96 homolog 5 68122724 68124503 - 116901656 MODEL JAAIVD010000023;XM_032903766 XP_032759657 uncharacterized protein C11orf96 homolog protein-coding 626092465 LOC116911243 glyceraldehyde-3-phosphate dehydrogenase-like 10 61786474 61787467 - 116911243 MODEL JAAIVD010000005 pseudo 626092466 Tbx15 T-box transcription factor 15 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein homodimerization activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); embryonic skeletal system morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Cousin Syndrome (ortholog); Craniofacial Abnormalities (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog); RNA polymerase II transcription repressor complex (ortholog) 7 85962418 86064337 - 22301074;30032202 116905148 MODEL JAAIVD010000026;XM_032907916 XP_032763807 T-box transcription factor TBX15 protein-coding 626092476 Mettl17 methyltransferase like 17 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); methyltransferase activity (ortholog); mitochondrial ribosome binding (ortholog); INVOLVED IN mitochondrial small ribosomal subunit assembly (ortholog); ribosomal small subunit biogenesis (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 12 72004960 72011512 - 22301074;30032202 116913726 MODEL JAAIVD010000007;XM_032918031 XP_032773922 methyltransferase-like protein 17, mitochondrial protein-coding 626092494 LOC116889319 ubiquitin-conjugating enzyme E2 N-like X 126465696 126466135 - 116889319 MODEL JAAIVD010000014 pseudo 626092495 LOC116902968 actin, alpha cardiac muscle 1-like 6 128913775 128914877 + 116902968 MODEL JAAIVD010000024 pseudo 626092496 LOC116886341 uncharacterized LOC116886341 17 42387349 42391954 + 116886341 MODEL JAAIVD010000011;XR_004386098 ncrna 626092501 LOC116913470 uncharacterized LOC116913470 12 59830471 59839359 + 116913470 MODEL JAAIVD010000007;XR_004389621 ncrna 626092506 Ube2w ubiquitin conjugating enzyme E2 W ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to misfolded protein (ortholog); cellular response to nutrient levels (ortholog); FOUND IN nucleus (ortholog) 1 136092508 136145298 - 116903552 MODEL JAAIVD010000025;XM_032906171 XP_032762062 ubiquitin-conjugating enzyme E2 W protein-coding 626092516 LOC116906475 small nucleolar RNA SNORA17 7 106986957 106987080 - 116906475 MODEL JAAIVD010000026 pseudo 626092517 LOC116889679 30S ribosomal protein S8-like 22301074;30032202 116889679 MODEL JAAIVD010000048;XM_032890569 XP_032746460 protein-coding 626092518 Lmx1a LIM homeobox transcription factor 1 alpha ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); central nervous system development (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 7 (ortholog); Hearing Loss (ortholog); schizophrenia (ortholog) 10 46996391 47149047 + 22301074;30032202 116911609 MODEL JAAIVD010000005;XM_032915583;XM_032915584 XP_032771474;XP_032771475 LIM homeobox transcription factor 1-alpha protein-coding 626092535 Acr acrosin ENCODES a protein that exhibits amidase activity (ortholog); D-mannose binding (ortholog); fucose binding (ortholog); INVOLVED IN acrosome matrix dispersal (ortholog); acrosome reaction (ortholog); activation of adenylate cyclase activity (ortholog); ASSOCIATED WITH spermatogenic failure 87 (ortholog); FOUND IN acrosomal vesicle (ortholog); Golgi-associated vesicle (ortholog); protein-containing complex (ortholog) 1 258874767 258880992 + 22301074;30032202 116890176 MODEL JAAIVD010000025;XM_032890910;XM_032890911 XP_032746801;XP_032746802 protein-coding 626092548 LOC116903567 N-acetyltransferase 8 6 60462186 60462952 + 30032202 116903567 MODEL JAAIVD010000024;XM_032906186 XP_032762077 protein-coding 626092553 LOC116886997 signal peptide peptidase-like 2A 18 10481832 10483393 - 116886997 MODEL JAAIVD010000013 pseudo 626092554 LOC116913232 proteasome subunit alpha type-7-like 12 72276432 72277281 - 116913232 MODEL JAAIVD010000007 pseudo 626092555 F2 coagulation factor II, thrombin ENCODES a protein that exhibits endopeptidase activity (ortholog); heparin binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); blood coagulation, fibrin clot formation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Coronary Syndrome (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 5 65769889 65783014 - 22301074;30032202 116900339 MODEL JAAIVD010000023;XM_032902093 XP_032757984 prothrombin protein-coding 626092573 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31433164 31433236 - 116910828 MODEL JAAIVD010000002 trna 626092574 LOC116907130 polypyrimidine tract-binding protein 1-like 8 48448186 48450594 - 116907130 MODEL JAAIVD010000027 pseudo 626092575 Atoh7 atonal bHLH transcription factor 7 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN circadian rhythm (ortholog); entrainment of circadian clock (ortholog); entrainment of circadian clock by photoperiod (ortholog); ASSOCIATED WITH Foveal Hypoplasia (ortholog); Persistent Hyperplastic Primary Vitreous, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 23588500 23589460 - 22301074 116887220 MODEL JAAIVD010000013;XM_032888781 XP_032744672 protein atonal homolog 7 protein-coding 626092580 LOC116906735 gamma-secretase subunit APH-1B 8 61143504 61162804 - 22301074;30032202 116906735 MODEL JAAIVD010000027;XM_032909553;XM_032909554;XM_032909555;XM_032909556;XM_032909557 XP_032765444;XP_032765445;XP_032765446;XP_032765447;XP_032765448 uncharacterized protein LOC116906735 protein-coding 626092604 Rtn4ip1 reticulon 4 interacting protein 1 ENCODES a protein that exhibits NADPH dehydrogenase (quinone) activity (ortholog); INVOLVED IN regulation of dendrite development (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 18 43601382 43642587 + 22301074;30032202 116886995 MODEL JAAIVD010000013;XM_032888478 XP_032744369 reticulon-4-interacting protein 1, mitochondrial protein-coding 626092617 LOC116901006 putative endogenous retrovirus group FC1 Env polyprotein 5 111595570 111599543 - 116901006 MODEL JAAIVD010000023;XM_032902610 XP_032758501 protein-coding 626092622 LOC116907806 40S ribosomal protein S12-like 1 167781232 167782424 - 22301074;30032202 116907806 MODEL JAAIVD010000025;XM_032910982 XP_032766873 protein-coding 626092627 LOC116902476 U6 spliceosomal RNA 5 62141655 62141761 - 116902476 MODEL JAAIVD010000023;XR_004388094 snrna 626092630 Sgip1 SH3GL interacting endocytic adaptor 1 ENCODES a protein that exhibits microtubule binding (ortholog); phospholipid binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN energy homeostasis (ortholog); plasma membrane tubulation (ortholog); positive regulation of eating behavior (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN AP-2 adaptor complex (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) 1 51594788 51796212 - 22301074;30032202 116899575 MODEL JAAIVD010000025;XM_032901511;XM_032901519;XM_032901527;XM_032901533;XM_032901541;XM_032901549;XM_032901559;XM_032901565;XM_032901573;XM_032901579;XM_032901586;XM_032901596;XM_032901605;XM_032901615;XM_032901625;XM_032901634 XP_032757402;XP_032757410;XP_032757418;XP_032757424;XP_032757432;XP_032757440;XP_032757450;XP_032757456;XP_032757464;XP_032757470;XP_032757477;XP_032757487;XP_032757496;XP_032757506;XP_032757516;XP_032757525 SH3-containing GRB2-like protein 3-interacting protein 1 protein-coding 626092692 Srd5a2 steroid 5 alpha-reductase 2 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase (NADP+) activity (ortholog); 3-oxo-5-alpha-steroid 4-dehydrogenase activity (ortholog); amide binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen metabolic process (ortholog); bone development (ortholog); PARTICIPATES IN testosterone biosynthetic pathway; ASSOCIATED WITH alopecia (ortholog); autism spectrum disorder (ortholog); breast carcinoma (ortholog); FOUND IN cell body fiber (ortholog); neuronal cell body (ortholog) 7 19196044 19233187 + 22301074;30032202 116905941 MODEL JAAIVD010000026;XM_032908934 XP_032764825 3-oxo-5-alpha-steroid 4-dehydrogenase 2 protein-coding 626092701 Slc35f1 solute carrier family 35 member F1 ASSOCIATED WITH atrial fibrillation (ortholog); intellectual disability (ortholog); nephrotic syndrome (ortholog); FOUND IN synaptic vesicle membrane (ortholog) 18 29681631 30066400 + 22301074 116886812 MODEL JAAIVD010000013;XM_032888242;XM_032888243 XP_032744133;XP_032744134 protein-coding 626092716 Morn1 MORN repeat containing 1 ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 5575547 5634473 - 30032202 116892024 MODEL JAAIVD010000025;XM_032893485;XM_032893489;XM_032893495 XP_032749376;XP_032749380;XP_032749386 MORN repeat-containing protein 1 protein-coding 626092737 Wbp2 WW domain binding protein 2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); nuclear estrogen receptor binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); establishment of protein localization to chromatin (ortholog); positive regulation of intracellular estrogen receptor signaling pathway (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 107 (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 67972979 67981462 + 30032202 116909520 MODEL JAAIVD010000002;XM_032913125;XM_032913126;XM_032913127;XM_032913128 XP_032769016;XP_032769017;XP_032769018;XP_032769019 WW domain-binding protein 2 protein-coding 626092759 LOC116900544 40S ribosomal protein S8-like 5 89724618 89725245 - 116900544 MODEL JAAIVD010000023 pseudo 626092760 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42286633 42286705 + 116884225 MODEL JAAIVD010000009 trna 626092761 LOC116892886 cytochrome c, somatic-like 2 198711830 198712235 + 116892886 MODEL JAAIVD010000001 pseudo 626092762 LOC116884074 small nucleolar RNA SNORA17 14 16169912 16170040 - 116884074 MODEL JAAIVD010000009;XR_004385820 snorna 626092765 Slc4a10 solute carrier family 4 member 10 ENCODES a protein that exhibits sodium,bicarbonate:chloride antiporter activity (ortholog); sodium:bicarbonate symporter activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); locomotory exploration behavior (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH autistic disorder (ortholog); cognitive disorder (ortholog); epilepsy (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); axon terminus (ortholog) 5 39626854 39906261 + 22301074;30032202 116901448 MODEL JAAIVD010000023;XM_032903381;XM_032903382;XM_032903383;XM_032903384;XM_032903385 XP_032759272;XP_032759273;XP_032759274;XP_032759275;XP_032759276 sodium-driven chloride bicarbonate exchanger protein-coding 626092804 Trpc5os TRPC5 opposite strand X 96469155 96469487 - 116889336 MODEL JAAIVD010000014;XM_032890453 XP_032746344 putative uncharacterized protein TRPC5OS protein-coding 626092807 LOC116889691 protein GrpE-like 22301074;30032202 116889691 MODEL JAAIVD010000052;XM_032890578 XP_032746469 protein-coding 626092808 LOC116886048 uncharacterized LOC116886048 1 5343927 5344737 + 116886048 MODEL JAAIVD010000025;XR_004386087 ncrna 626092813 LOC116883202 protein SET-like 14 40874173 40876498 - 116883202 MODEL JAAIVD010000009 pseudo 626092814 LOC116907589 zinc finger protein 433-like 1 157377328 157390326 - 30032202 116907589 MODEL JAAIVD010000025;XM_032910669 XP_032766560 protein-coding 626092820 LOC116914413 rho GTPase-activating protein 7-like 13 50242997 50248638 + 116914413 MODEL JAAIVD010000008;XM_032918670 XP_032774561 protein-coding 626092826 LOC116883713 cathepsin 7-like 14 76941861 76946067 + 30032202 116883713 MODEL JAAIVD010000009;XM_032884927;XM_032884929 XP_032740818;XP_032740820 protein-coding 626092839 LOC116914982 tubulin alpha-1B chain-like 13 24016973 24020138 + 116914982 MODEL JAAIVD010000008 pseudo 626092840 LOC116909389 uncharacterized LOC116909389 9 31491106 31515839 - 22301074;30032202 116909389 MODEL JAAIVD010000002;XM_032912949;XM_032912950 XP_032768840;XP_032768841 uncharacterized protein LOC116909389 protein-coding 626092850 LOC116910103 olfactory receptor 1361-like 9 33655886 33656809 + 22301074;30032202 116910103 MODEL JAAIVD010000002;XM_032913930 XP_032769821 protein-coding 626092853 Crip3 cysteine rich protein 3 INVOLVED IN T cell proliferation (ortholog); FOUND IN cytoplasm (ortholog) 4 83434060 83436775 - 116898048 MODEL JAAIVD010000003;XM_032899442 XP_032755333 cysteine-rich protein 3 protein-coding 626092865 Lrrc3b leucine rich repeat containing 3B ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); Stomach Neoplasms (ortholog) 1 45013231 45015035 - 22301074 116898944 MODEL JAAIVD010000025;XM_032900365 XP_032756256 leucine-rich repeat-containing protein 3B protein-coding 626092870 LOC116910725 small Cajal body-specific RNA 3 9 83800117 83800248 + 116910725 MODEL JAAIVD010000002;XR_004389245 ncrna 626092873 Brk1 BRICK1 subunit of SCAR/WAVE actin nucleating complex ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell motility (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; FOUND IN lamellipodium (ortholog); SCAR complex (ortholog) 6 32919925 32934157 - 30032202 116903403 MODEL JAAIVD010000024;XM_032905915 XP_032761806 protein BRICK1 protein-coding 626092880 Med12l mediator complex subunit 12L PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 3 95587717 95908512 - 22301074;30032202 116896836 MODEL JAAIVD010000012;XM_032898332;XM_032898333;XM_032898334;XM_032898335;XM_032898336;XM_032898337;XM_032898338;XM_032898339;XM_032898340;XM_032898341 XP_032754223;XP_032754224;XP_032754225;XP_032754226;XP_032754227;XP_032754228;XP_032754229;XP_032754230;XP_032754231;XP_032754232 mediator of RNA polymerase II transcription subunit 12-like protein protein-coding 626092944 LOC116909436 olfactory receptor 1361-like 9 38363080 38366381 - 22301074;30032202 116909436 MODEL JAAIVD010000002;XM_032913011;XM_032913012 XP_032768902;XP_032768903 protein-coding 626092950 Scarb2 scavenger receptor class B member 2 ENCODES a protein that exhibits cargo receptor activity (ortholog); cholesterol binding (ortholog); enzyme binding (ortholog); INVOLVED IN aminophospholipid transport (ortholog); autophagy (ortholog); endosome to plasma membrane protein transport (ortholog); ASSOCIATED WITH benign epilepsy with centrotemporal spikes (ortholog); COVID-19 (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN endocytic vesicle membrane (ortholog); lysosomal lumen (ortholog); lysosomal membrane (ortholog) 11 5290883 5345758 - 22301074;30032202 116912066 MODEL JAAIVD010000006;XM_032915927 XP_032771818 lysosome membrane protein 2 protein-coding 626092966 Rnase10 ribonuclease A family member 10 (inactive) INVOLVED IN epithelial cell morphogenesis (ortholog); heterotypic cell-cell adhesion (ortholog); male gonad development (ortholog) 12 72306742 72308648 - 22301074;30032202 116913950 MODEL JAAIVD010000007;XM_032918215 XP_032774106 inactive ribonuclease-like protein 10 protein-coding 626092970 LOC116910717 small nucleolar RNA SNORA17 9 38287714 38287843 + 116910717 MODEL JAAIVD010000002;XR_004389244 snorna 626092973 LOC116883573 histone H2B type 1-B 14 42744645 42745230 - 22301074;30032202 116883573 MODEL JAAIVD010000009;XM_032884756 XP_032740647 protein-coding 626092977 LOC116906726 60S ribosomal protein L7a-like 8 47579901 47580819 + 116906726 MODEL JAAIVD010000027 pseudo 626092978 Sorbs1 sorbin and SH3 domain containing 1 ENCODES a protein that exhibits insulin receptor binding (ortholog); protein kinase binding (ortholog); signaling receptor complex adaptor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); cellular response to insulin stimulus (ortholog); focal adhesion assembly (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH Insulin Resistance (ortholog); obesity (ortholog); prostate cancer (ortholog); FOUND IN adherens junction (ortholog); cell-substrate junction (ortholog); centrosome (ortholog) 2 39416281 39531879 - 22301074;30032202 116891148 MODEL JAAIVD010000001;XM_032891900;XM_032891901;XM_032891902;XM_032891903;XM_032891904;XM_032891905;XM_032891906;XM_032891907;XM_032891908;XM_032891910;XM_032891911;XM_032891912;XM_032891913;XM_032891914;XM_032891915;XM_032891916;XM_032891917;XM_032891918;XM_032891919;XM_032891921;XM_032891922;XM_032891923;XM_032891924;XM_032891925;XM_032891926;XM_032891927;XM_032891928;XM_032891929;XM_032891930;XM_032891931;XM_032891932;XM_032891933;XM_032891934;XM_032891935 XP_032747791;XP_032747792;XP_032747793;XP_032747794;XP_032747795;XP_032747796;XP_032747797;XP_032747798;XP_032747799;XP_032747801;XP_032747802;XP_032747803;XP_032747804;XP_032747805;XP_032747806;XP_032747807;XP_032747808;XP_032747809;XP_032747810;XP_032747812;XP_032747813;XP_032747814;XP_032747815;XP_032747816;XP_032747817;XP_032747818;XP_032747819;XP_032747820;XP_032747821;XP_032747822;XP_032747823;XP_032747824;XP_032747825;XP_032747826 sorbin and SH3 domain-containing protein 1 protein-coding 626093066 LOC116885291 inactive 2'-5' oligoadenylate synthetase 1C-like 16 32919486 32929254 - 22301074;30032202 116885291 MODEL JAAIVD010000004;XM_032886540 XP_032742431 protein-coding 626093076 LOC116884393 ferritin light chain 1-like 15 58405075 58405496 + 116884393 MODEL JAAIVD010000010 pseudo 626093077 LOC116910720 small nucleolar RNA SNORA17 9 31302240 31302358 + 116910720 MODEL JAAIVD010000002 pseudo 626093078 Kars1 lysyl-tRNA synthetase 1 ENCODES a protein that exhibits amino acid binding (ortholog); ATP binding (ortholog); ATP:ADP adenylyltransferase activity (ortholog); INVOLVED IN basophil activation involved in immune response (ortholog); diadenosine tetraphosphate biosynthetic process (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 89 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 31678813 31697351 - 22301074;30032202 116886139 MODEL JAAIVD010000011;XM_032887491;XM_032887492 XP_032743382;XP_032743383 lysine--tRNA ligase protein-coding 626093099 LOC116901066 zinc finger protein 844-like 5 142533065 142539292 + 116901066 MODEL JAAIVD010000023 pseudo 626093100 LOC116909565 olfactory receptor 11L1-like 9 39465042 39465993 + 116909565 MODEL JAAIVD010000002 pseudo 626093101 LOC116903924 uncharacterized LOC116903924 6 100055515 100057336 - 116903924 MODEL JAAIVD010000024;XR_004388311 ncrna 626093105 Kcne5 potassium voltage-gated channel subfamily E regulatory subunit 5 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); cardiac muscle contraction (ortholog); negative regulation of potassium ion export across plasma membrane (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Sudden Unexpected Nocturnal Death Syndrome (ortholog); FOUND IN plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) X 94415530 94416975 - 22301074;30032202 116888482 MODEL JAAIVD010000014;XM_032889757 XP_032745648 potassium voltage-gated channel subfamily E regulatory beta subunit 5 protein-coding 626093110 LOC116883534 cathepsin M-like 14 81967999 81972067 + 30032202 116883534 MODEL JAAIVD010000009;XM_032884706 XP_032740597 protein-coding 626093120 LOC116906879 DNA (cytosine-5)-methyltransferase 3A-like 8 13993592 13995895 - 116906879 MODEL JAAIVD010000027 pseudo 626093121 Clu clusterin ENCODES a protein that exhibits amyloid-beta binding (ortholog); ATP hydrolysis activity (ortholog); low-density lipoprotein particle receptor binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); cell morphogenesis (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN aggresome (ortholog); apical dendrite (ortholog); cell periphery (ortholog) 12 58463019 58475194 - 116913063 MODEL JAAIVD010000007;XM_032917191 XP_032773082 protein-coding 626093132 LOC116895564 non-histone chromosomal protein HMG-14-like 3 133655694 133655961 - 116895564 MODEL JAAIVD010000012 pseudo 626093133 LOC116907603 olfactory receptor 143-like 8 32155734 32156696 + 22301074;30032202 116907603 MODEL JAAIVD010000027;XM_032910654 XP_032766545 protein-coding 626093136 Col20a1 collagen type XX alpha 1 chain ASSOCIATED WITH keratosis palmoplantaris striata 1 (ortholog) 5 158090917 158124553 + 22301074 116902428 MODEL JAAIVD010000023;XM_032904959 XP_032760850 collagen alpha-1(XX) chain protein-coding 626093177 LOC116906054 glyceraldehyde-3-phosphate dehydrogenase-like 7 48934313 48936546 - 116906054 MODEL JAAIVD010000026 pseudo 626093178 Ttc8 tetratricopeptide repeat domain 8 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN axon guidance (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 8 (ortholog); fundus dystrophy (ortholog); FOUND IN BBSome (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 7 112083655 112136511 + 22301074;30032202 116905349 MODEL JAAIVD010000026;XM_032908255 XP_032764146 tetratricopeptide repeat protein 8 protein-coding 626093196 LOC116899881 small nucleolar RNA SNORA17 4 4373262 4373385 + 116899881 MODEL JAAIVD010000003 pseudo 626093197 LOC116911839 small nucleolar RNA SNORA17 10 42309936 42310034 - 116911839 MODEL JAAIVD010000005 pseudo 626093198 C12H14orf93 chromosome 12 C14orf93 homolog INVOLVED IN cell differentiation (ortholog); positive regulation of gene expression (ortholog) 12 70391938 70423168 + 116913696 MODEL JAAIVD010000007;XM_032917987;XM_032917988;XM_032917989;XM_032917991;XM_032917992 XP_032773878;XP_032773879;XP_032773880;XP_032773882;XP_032773883 uncharacterized protein C14orf93 homolog protein-coding 626093220 LOC116898416 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like 4 88328645 88329231 + 116898416 MODEL JAAIVD010000003 pseudo 626093221 Prkn parkin RBR E3 ubiquitin protein ligase ENCODES a protein that exhibits actin binding (ortholog); beta-catenin binding (ortholog); cullin family protein binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); aggresome assembly (ortholog); autophagy of mitochondrion (ortholog); PARTICIPATES IN altered mitochondrial autophagy pathway; mitochondrial autophagy pathway; Parkinson's disease pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); autism spectrum disorder (ortholog); FOUND IN aggresome (ortholog); axon (ortholog); cytoplasm (ortholog) 2 189645291 190070073 + 22301074;30032202 116892820 MODEL JAAIVD010000001;XM_032894704;XM_032894705 XP_032750595;XP_032750596 E3 ubiquitin-protein ligase parkin protein-coding 626093232 Map3k7cl MAP3K7 C-terminal like 4 56272337 56313120 - 30032202 116898357 MODEL JAAIVD010000003;XM_032899675 XP_032755566 MAP3K7 C-terminal-like protein protein-coding 626093242 Larp4 La ribonucleoprotein 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); positive regulation of translation (ortholog); post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); cytosolic small ribosomal subunit (ortholog) 1 272780335 272828925 + 30032202 116885275 MODEL JAAIVD010000025;XM_032886509;XM_032886520;XM_032886529;XM_032886537;XM_032886544;XM_032886552 XP_032742400;XP_032742411;XP_032742420;XP_032742428;XP_032742435;XP_032742443 la-related protein 4 protein-coding 626093277 Lratd2 LRAT domain containing 2 FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 1 237720432 237724283 + 116912075 MODEL JAAIVD010000025;XM_032915953 XP_032771844 protein LRATD2 protein-coding 626093283 LOC116894057 olfactory receptor 51F2 2 102786056 102787021 + 22301074 116894057 MODEL JAAIVD010000001;XM_032895779 XP_032751670 protein-coding 626093287 LOC116888552 olfactory receptor 63 1 232496686 232497636 - 22301074 116888552 MODEL JAAIVD010000025;XM_032889886 XP_032745777 protein-coding 626093290 Ralgds ral guanine nucleotide dissociation stimulator ENCODES a protein that exhibits GTPase regulator activity (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); intellectual disability (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); nucleus (ortholog) 5 8124219 8144237 - 22301074;30032202 116901229 MODEL JAAIVD010000023;XM_032902967 XP_032758858 protein-coding 626093312 LOC116909002 ADP/ATP translocase 2-like 9 50368950 50369886 - 116909002 MODEL JAAIVD010000002 pseudo 626093313 LOC116900899 tyrosine-protein kinase receptor UFO-like 5 73273813 73279676 + 116900899 MODEL JAAIVD010000023 pseudo 626093314 LOC116906827 phospholipid scramblase 2 8 83965506 83989095 + 22301074;30032202 116906827 MODEL JAAIVD010000027;XM_032909710;XM_032909711;XM_032909712 XP_032765601;XP_032765602;XP_032765603 protein-coding 626093331 Ppp6c protein phosphatase 6 catalytic subunit ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); negative regulation of cGAS/STING signaling pathway (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); melanoma (ortholog); FOUND IN cytosol (ortholog) 5 16918633 16951031 - 30032202 116901377 MODEL JAAIVD010000023;XM_032903243;XM_032903245 XP_032759134;XP_032759136 serine/threonine-protein phosphatase 6 catalytic subunit protein-coding 626093345 LOC116884945 proteasome subunit alpha-type 7-like 15 24882934 24887688 - 22301074 116884945 MODEL JAAIVD010000010;XM_032886152 XP_032742043 protein-coding 626093352 LOC116886574 gamma-aminobutyric acid receptor-associated protein-like 2 17 46566770 46567172 - 116886574 MODEL JAAIVD010000011 pseudo 626093353 Krt5 keratin 5 ENCODES a protein that exhibits scaffold protein binding (ortholog); INVOLVED IN intermediate filament polymerization (ortholog); regulation of cell migration (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); intermediate filament (ortholog) 1 261350950 261362547 + 22301074;30032202 116890209 MODEL JAAIVD010000025;XM_032890944;XM_032890945;XM_032890946 XP_032746835;XP_032746836;XP_032746837 keratin, type II cytoskeletal 5 protein-coding 626093375 LOC116898005 keratin-associated protein 24-1 4 55231020 55231754 + 30032202 116898005 MODEL JAAIVD010000003;XM_032899401 XP_032755292 protein-coding 626093378 Impg1 interphotoreceptor matrix proteoglycan 1 INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); macular degeneration (ortholog); retinitis pigmentosa (ortholog); FOUND IN interphotoreceptor matrix (ortholog) 8 74539203 74672230 - 30032202 116906903 MODEL JAAIVD010000027;XM_032909816 XP_032765707 protein-coding 626093399 Yipf3 Yip1 domain family member 3 ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN Golgi apparatus (ortholog); transport vesicle (ortholog) 4 83616528 83623177 - 30032202 116899114 MODEL JAAIVD010000003;XM_032900634 XP_032756525 protein YIPF3 protein-coding 626093412 Pnpt1 polyribonucleotide nucleotidyltransferase 1 ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); identical protein binding (ortholog); miRNA binding (ortholog); INVOLVED IN cellular response to interferon-beta (ortholog); cellular response to oxidative stress (ortholog); liver regeneration (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 70 (ortholog); combined oxidative phosphorylation deficiency 13 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 11 96750811 96780645 + 22301074;30032202 116912116 MODEL JAAIVD010000006;XM_032916020 XP_032771911 polyribonucleotide nucleotidyltransferase 1, mitochondrial protein-coding 626093444 Lca5l lebercilin LCA5 like 4 48495123 48514166 + 30032202 116898950 MODEL JAAIVD010000003;XM_032900368 XP_032756259 lebercilin-like protein protein-coding 626093456 Vwa1 von Willebrand factor A domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); microfibril binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN behavioral response to pain (ortholog); extracellular matrix organization (ortholog); protein homooligomerization (ortholog); ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 7 (ortholog); neuromuscular disease (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); extracellular region (ortholog) 1 4855273 4860588 + 22301074 116891564 MODEL JAAIVD010000025;XM_032892747 XP_032748638 von Willebrand factor A domain-containing protein 1 protein-coding 626093464 Dhdh dihydrodiol dehydrogenase ENCODES a protein that exhibits D-xylose 1-dehydrogenase (NADP+) activity (ortholog); INVOLVED IN D-xylose catabolic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog) 2 154024367 154034964 + 22301074;30032202 116892148 MODEL JAAIVD010000001;XM_032893642 XP_032749533 trans-1,2-dihydrobenzene-1,2-diol dehydrogenase protein-coding 626093475 LOC116896100 non-histone chromosomal protein HMG-14-like 3 223184972 223186881 - 116896100 MODEL JAAIVD010000012 pseudo 626093476 Atg4d autophagy related 4D cysteine peptidase ENCODES a protein that exhibits cysteine-type exopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); mitophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH cerebellar ataxia (ortholog); Liver Reperfusion Injury (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 8 17530216 17539497 + 22301074 116906674 MODEL JAAIVD010000027;XM_032909461 XP_032765352 cysteine protease ATG4D protein-coding 626093490 LOC116907268 beta-galactosidase-1-like protein 2 8 22525994 22559948 - 22301074;30032202 116907268 MODEL JAAIVD010000027;XM_032910223 XP_032766114 protein-coding 626093514 Mrps11 mitochondrial ribosomal protein S11 ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 2 121451552 121461364 - 22301074;30032202 116891956 MODEL JAAIVD010000001;XM_032893398 XP_032749289 28S ribosomal protein S11, mitochondrial protein-coding 626093525 Lepr leptin receptor ENCODES a protein that exhibits identical protein binding (ortholog); leptin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone growth (ortholog); cell surface receptor signaling pathway via STAT (ortholog); PARTICIPATES IN altered energy homeostasis pathway; altered leptin system pathway; energy homeostasis pathway; ASSOCIATED WITH Albuminuria (ortholog); Animal Disease Models (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog); receptor complex (ortholog) 1 52744656 52845115 - 22301074;30032202 116899668 MODEL JAAIVD010000025;XM_032901686 XP_032757577 protein-coding 626093548 LOC116895806 Fc receptor-like protein 2 3 66220753 66294636 + 22301074;30032202 116895806 MODEL JAAIVD010000012;XM_032896945 XP_032752836 protein-coding 626093561 Tpm1 tropomyosin 1 ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN actin filament capping (ortholog); cardiac muscle contraction (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial heart septal defect 1 (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); bleb (ortholog); cytoplasm (ortholog) 8 61377330 61404020 - 30032202 116908117 MODEL JAAIVD010000027;XM_032911397;XM_032911398;XM_032911399;XM_032911400;XM_032911401;XM_032911403;XM_032911404;XM_032911405;XM_032911406;XM_032911407;XM_032911408;XM_032911409;XM_032911410 XP_032767288;XP_032767289;XP_032767290;XP_032767291;XP_032767292;XP_032767294;XP_032767295;XP_032767296;XP_032767297;XP_032767298;XP_032767299;XP_032767300;XP_032767301 tropomyosin alpha-1 chain protein-coding 626093603 LOC116898681 protein HIRA ENCODES a protein that exhibits histone binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN gastrulation (ortholog); muscle cell differentiation (ortholog); nucleosome assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Cardiac Fibrosis (ortholog); Fanconi anemia complementation group T (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 4 4123424 4228737 + 22301074;30032202 116898681 MODEL JAAIVD010000003;XM_032899933;XM_032899934;XM_032899935;XM_032899937;XM_032899938;XM_032899939 XP_032755824;XP_032755825;XP_032755826;XP_032755828;XP_032755829;XP_032755830 protein-coding 626093650 Apod apolipoprotein D ENCODES a protein that exhibits cholesterol binding (ortholog); INVOLVED IN glucose metabolic process (ortholog); lipid metabolic process (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Injuries (ortholog); gestational diabetes (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); dendrite (ortholog) 4 16199064 16220042 - 22301074;30032202 116898755 MODEL JAAIVD010000003;XM_032900073 XP_032755964 protein-coding 626093659 LOC116898531 receptor tyrosine-protein kinase erbB-4-like 4 142141899 142161629 - 30032202 116898531 MODEL JAAIVD010000003;XM_032899751 XP_032755642 protein-coding 626093668 LOC116884930 tRNA-splicing endonuclease subunit Sen34-like 15 14858878 15011501 + 116884930 MODEL JAAIVD010000010 pseudo 626093669 LOC116883901 non-POU domain-containing octamer-binding protein-like 14 49219971 49221682 + 116883901 MODEL JAAIVD010000009 pseudo 626093670 Ankrd31 ankyrin repeat domain 31 INVOLVED IN homologous chromosome pairing at meiosis (ortholog); meiotic DNA double-strand break formation involved in reciprocal meiotic recombination (ortholog); positive regulation of meiotic DNA double-strand break formation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); long QT syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN chromatin (ortholog) 3 222791559 222931052 + 22301074 116896098 MODEL JAAIVD010000012;XM_032897071 XP_032752962 ankyrin repeat domain-containing protein 31 protein-coding 626093688 LOC116910264 olfactory receptor 1361-like 9 33606661 33608744 + 116910264 MODEL JAAIVD010000002 pseudo 626093689 LOC116897564 small nucleolar RNA SNORA17 3 4367907 4368035 - 116897564 MODEL JAAIVD010000012;XR_004387576 snorna 626093692 Get4 guided entry of tail-anchored proteins factor 4 ENCODES a protein that exhibits protein carrier chaperone (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); maintenance of unfolded protein (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIy (ortholog); FOUND IN BAT3 complex (ortholog); chromosome (ortholog); cytoplasm (ortholog) 16 13931273 13948753 - 22301074;30032202 116885420 MODEL JAAIVD010000004;XM_032886707 XP_032742598 Golgi to ER traffic protein 4 homolog protein-coding 626093705 LOC116894956 small nucleolar RNA SNORA57 2 9055708 9055855 + 116894956 MODEL JAAIVD010000001;XR_004387150 snorna 626093708 LOC116904699 small nucleolar RNA SNORA48 6 73675652 73675795 + 116904699 MODEL JAAIVD010000024;XR_004388395 snorna 626093711 Cmtr1 cap methyltransferase 1 ENCODES a protein that exhibits methyltransferase cap1 activity (ortholog); INVOLVED IN 7-methylguanosine mRNA capping (ortholog); mRNA processing (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 18 4164734 4207887 - 22301074;30032202 116887543 MODEL JAAIVD010000013;XM_032889174 XP_032745065 cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 protein-coding 626093739 Iah1 isoamyl acetate hydrolyzing esterase 1 (putative) ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN gene expression (ortholog) 7 37856586 37863637 + 22301074 116904907 MODEL JAAIVD010000026;XM_032907517 XP_032763408 isoamyl acetate-hydrolyzing esterase 1 homolog protein-coding 626093749 LOC116886757 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like 1 216643228 216644657 + 116886757 MODEL JAAIVD010000025 pseudo 626093750 LOC116906313 U6 spliceosomal RNA 7 64657488 64657595 + 116906313 MODEL JAAIVD010000026;XR_004388601 snrna 626093753 Hpn hepsin ENCODES a protein that exhibits peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN basement membrane disassembly (ortholog); cholesterol homeostasis (ortholog); cochlea morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); lipid storage disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell surface (ortholog); cell-cell junction (ortholog); endoplasmic reticulum membrane (ortholog) 2 164912108 164929359 + 22301074;30032202 116894447 MODEL JAAIVD010000001;XM_032896149;XM_032896151 XP_032752040;XP_032752042 serine protease hepsin protein-coding 626093774 LOC116889373 high mobility group protein B4-like X 82606756 82607262 + 30032202 116889373 MODEL JAAIVD010000014;XM_032890475 XP_032746366 protein-coding 626093777 Sgo1 shugoshin 1 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN attachment of spindle microtubules to kinetochore (ortholog); centriole-centriole cohesion (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH Cardiac Arrhythmias (ortholog); chronic atrial and intestinal dysrhythmia (ortholog); Chronobiology Disorders (ortholog); FOUND IN centrosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) 4 90705136 90718372 - 22301074;30032202 116898424 MODEL JAAIVD010000003;XM_032899704 XP_032755595 protein-coding 626093788 LOC116901038 acidic leucine-rich nuclear phosphoprotein 32 family member E-like 5 131015961 131020131 - 116901038 MODEL JAAIVD010000023 pseudo 626093789 LOC116915027 40S ribosomal protein S23-like 13 73985738 73986152 - 116915027 MODEL JAAIVD010000008 pseudo 626093790 Rps17 ribosomal protein S17 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN erythrocyte homeostasis (ortholog); ribosomal small subunit biogenesis (ortholog); rRNA processing (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 4 (ortholog); FOUND IN cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 2 118911515 118914782 + 22301074;30032202 116891905 MODEL JAAIVD010000001;XM_032893327 XP_032749218 40S ribosomal protein S17 protein-coding 626093799 LOC116896531 60S ribosomal protein L35a-like 1 31401353 31401691 - 116896531 MODEL JAAIVD010000025 pseudo 626093800 LOC116887752 small nucleolar RNA U3 18 47779155 47779279 - 116887752 MODEL JAAIVD010000013 pseudo 626093801 L3hypdh trans-L-3-hydroxyproline dehydratase ENCODES a protein that exhibits hydro-lyase activity (ortholog); proline racemase activity (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 7 85745906 85760672 - 30032202 116905146 MODEL JAAIVD010000026;XM_032907914 XP_032763805 trans-3-hydroxy-L-proline dehydratase protein-coding 626093810 Tvp23a trans-golgi network vesicle protein 23 homolog A 9 11909597 11944755 + 30032202 116908794 MODEL JAAIVD010000002;XM_032912187;XM_032912188;XM_032912189 XP_032768078;XP_032768079;XP_032768080 Golgi apparatus membrane protein TVP23 homolog A protein-coding 626093829 Ssr4 signal sequence receptor subunit 4 ASSOCIATED WITH congenital disorder of glycosylation Iy (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Sec61 translocon complex (ortholog) X 128790277 128794265 - 22301074;30032202 116889120 MODEL JAAIVD010000014;XM_032890291;XM_032890292 XP_032746182;XP_032746183 translocon-associated protein subunit delta protein-coding 626093845 LOC116912637 UDP-glucuronosyltransferase 2B17-like 11 1569221 1576854 + 22301074 116912637 MODEL JAAIVD010000006;XM_032916755 XP_032772646 protein-coding 626093850 LOC116913323 small EDRK-rich factor 2-like 12 6746089 6746287 + 116913323 MODEL JAAIVD010000007 pseudo 626093851 LOC116895164 NADPH-dependent 3-keto-steroid reductase Hsd3b5 3 58555548 58560058 - 22301074 116895164 MODEL JAAIVD010000012;XM_032896525 XP_032752416 protein-coding 626093857 Vangl1 VANGL planar cell polarity protein 1 INVOLVED IN mucociliary clearance (ortholog); pigmentation (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); catecholaminergic polymorphic ventricular tachycardia (ortholog); caudal regression syndrome (ortholog); FOUND IN lateral plasma membrane (ortholog) 3 55879584 55921214 + 22301074;30032202 116896457 MODEL JAAIVD010000012;XM_032897616;XM_032897617 XP_032753507;XP_032753508 vang-like protein 1 protein-coding 626093870 LOC116890351 mucin-19-like 1 264911528 264944196 + 22301074 116890351 MODEL JAAIVD010000025;XM_032891006 XP_032746897 protein-coding 626093886 LOC116884779 60S ribosomal protein L31-like 15 67215001 67215425 - 116884779 MODEL JAAIVD010000010 pseudo 626093887 Astl astacin like metalloendopeptidase ENCODES a protein that exhibits aspartic-type peptidase activity (ortholog); glutamic-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN cell adhesion (ortholog); fertilization (ortholog); negative regulation of binding of sperm to zona pellucida (ortholog); ASSOCIATED WITH Oocyte/Zygote/Embryo Maturation Arrest 11 (ortholog); FOUND IN cortical granule (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) 5 106126472 106142524 + 22301074;30032202 116900618 MODEL JAAIVD010000023;XM_032902337 XP_032758228 astacin-like metalloendopeptidase protein-coding 626093900 Pelp1 proline, glutamate and leucine rich protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); SUMO binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN euchromatin (ortholog); MLL1 complex (ortholog); nucleolus (ortholog) 9 49997859 50014493 - 30032202 116909321 MODEL JAAIVD010000002;XM_032912860 XP_032768751 proline-, glutamic acid- and leucine-rich protein 1 protein-coding 626093921 LOC116892980 60S ribosomal protein L13-like 2 216970240 216970853 + 116892980 MODEL JAAIVD010000001 pseudo 626093922 LOC116910710 small nucleolar RNA SNORA17 9 43653304 43653435 + 116910710 MODEL JAAIVD010000002;XR_004389237 snorna 626093925 LOC116897475 U7 small nuclear RNA 3 93309566 93309631 - 116897475 MODEL JAAIVD010000012 pseudo 626093926 LOC116898534 PC-esterase domain-containing protein 1B-like 4 143133465 143139111 + 116898534 MODEL JAAIVD010000003;XM_032899753 XP_032755644 protein-coding 626093930 LOC116900779 WAP four-disulfide core domain protein 6B-like 5 153346087 153356330 - 22301074;30032202 116900779 MODEL JAAIVD010000023;XM_032902488 XP_032758379 protein-coding 626093937 LOC116900868 ribosomal oxygenase 2-like 5 67326573 67340042 - 116900868 MODEL JAAIVD010000023 pseudo 626093938 Ehf ETS homologous factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 5 81099340 81137600 - 22301074;30032202 116901685 MODEL JAAIVD010000023;XM_032903809;XM_032903810;XM_032903811 XP_032759700;XP_032759701;XP_032759702 protein-coding 626093960 LOC116892847 ubiquitin-60S ribosomal protein L40-like 2 192452873 192453352 + 116892847 MODEL JAAIVD010000001 pseudo 626093961 Kmo kynurenine 3-monooxygenase ENCODES a protein that exhibits FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); kynurenine 3-monooxygenase activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); kynurenic acid biosynthetic process (ortholog); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); allergic contact dermatitis (ortholog); depressive disorder (ortholog); FOUND IN extracellular space (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 10 54154418 54186252 + 22301074;30032202 116911211 MODEL JAAIVD010000005;XM_032915088 XP_032770979 protein-coding 626093980 LOC116905097 Y-box-binding protein 1-like 1 146801194 146802762 - 116905097 MODEL JAAIVD010000025 pseudo 626093981 Fndc8 fibronectin type III domain containing 8 ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog) 9 87615860 87623712 - 22301074;30032202 116909727 MODEL JAAIVD010000002;XM_032913403 XP_032769294 fibronectin type III domain-containing protein 8 protein-coding 626093989 Gpr158 G protein-coupled receptor 158 ENCODES a protein that exhibits enzyme activator activity (ortholog); G protein-coupled glycine receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN brain development (ortholog); cognition (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); postsynaptic density membrane (ortholog) 14 2423294 2791144 - 22301074 116883377 MODEL JAAIVD010000009;XM_032884492 XP_032740383 probable G-protein coupled receptor 158 protein-coding 626094004 LOC116909395 olfactory receptor 1361-like 9 809018 809959 - 22301074;30032202 116909395 MODEL JAAIVD010000002;XM_032912955 XP_032768846 protein-coding 626094007 LOC116884635 zinc finger protein 431-like 15 43417117 43429179 + 22301074 116884635 MODEL JAAIVD010000010;XM_032885776 XP_032741667 protein-coding 626094015 LOC116907717 keratin, type I cytoskeletal 18-like 8 19829192 19830399 + 22301074;30032202 116907717 MODEL JAAIVD010000027;XM_032910843 XP_032766734 protein-coding 626094018 Sema4b semaphorin 4B FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 120025590 120065938 - 30032202 116891929 MODEL JAAIVD010000001;XM_032893366 XP_032749257 semaphorin-4B protein-coding 626094037 Heatr5a HEAT repeat containing 5A 7 65314715 65404713 - 30032202 116905038 MODEL JAAIVD010000026;XM_032907720 XP_032763611 HEAT repeat-containing protein 5A protein-coding 626094078 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41804870 41804942 - 116884166 MODEL JAAIVD010000009 trna 626094079 Lmbrd2 LMBR1 domain containing 2 INVOLVED IN adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH body dysmorphic disorder (ortholog); DEVELOPMENTAL DELAY WITH VARIABLE NEUROLOGIC AND BRAIN ABNORMALITIES (ortholog); Developmental Disabilities (ortholog) 3 171393937 171445559 - 30032202 116897133 MODEL JAAIVD010000012;XM_032898796;XM_032898797 XP_032754687;XP_032754688 G-protein coupled receptor-associated protein LMBRD2 protein-coding 626094104 Cimip5 ciliary microtubule inner protein 5 FOUND IN cilium (ortholog) 7 36815220 36821285 - 116905646 MODEL JAAIVD010000026;XM_032908621;XM_032908623 XP_032764512;XP_032764514 C7H2orf50 chromosome 7 C2orf50 homolog;uncharacterized protein C2orf50 homolog protein-coding 626094118 LOC116897706 uncharacterized LOC116897706 4 25299126 25351215 - 116897706 MODEL JAAIVD010000003 pseudo 626094119 Fads6 fatty acid desaturase 6 9 68803685 68820525 + 22301074;30032202 116909889 MODEL JAAIVD010000002;XM_032913629 XP_032769520 protein-coding 626094129 Ppfia2 PPFI scaffold protein A2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); structural constituent of presynapse (ortholog); INVOLVED IN dense core granule cytoskeletal transport (ortholog); regulation of dendritic spine development (ortholog); regulation of dendritic spine morphogenesis (ortholog); FOUND IN dendritic spine (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 1 184736158 185196181 + 22301074;30032202 116908667 MODEL JAAIVD010000025;XM_032911955;XM_032911963;XM_032911973;XM_032911982;XM_032911991;XM_032911998;XM_032912007;XM_032912015;XM_032912025;XM_032912035;XM_032912042;XM_032912051;XM_032912057;XM_032912066;XM_032912073;XM_032912081;XM_032912088;XM_032912097 XP_032767846;XP_032767854;XP_032767864;XP_032767873;XP_032767882;XP_032767889;XP_032767898;XP_032767906;XP_032767916;XP_032767926;XP_032767933;XP_032767942;XP_032767948;XP_032767957;XP_032767964;XP_032767972;XP_032767979;XP_032767988 PTPRF interacting protein alpha 2;liprin-alpha-2 protein-coding 626094196 LOC116913422 uncharacterized LOC116913422 12 9837862 9862620 - 116913422 MODEL JAAIVD010000007;XR_004389614 ncrna 626094201 Syn3 synapsin III ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN synaptic vesicle clustering (ortholog); synaptic vesicle cycle (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 1 162108157 162543735 + 22301074;30032202 116907253 MODEL JAAIVD010000025;XM_032910213;XM_032910220;XM_032910225;XM_032910230 XP_032766104;XP_032766111;XP_032766116;XP_032766121 synapsin-3 protein-coding 626094228 Mgat2 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity (ortholog); carbohydrate binding (ortholog); manganese ion binding (ortholog); INVOLVED IN protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIa (ortholog); Congenital, Hereditary, and Neonatal Diseases and Abnormalities (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 7 82845682 82848296 + 22301074;30032202 116905113 MODEL JAAIVD010000026;XM_032907851 XP_032763742 protein-coding 626094233 LOC116909304 olfactory receptor 10-like 9 32017038 32018602 + 22301074 116909304 MODEL JAAIVD010000002;XM_032912845 XP_032768736 protein-coding 626094238 LOC116893430 glyceraldehyde-3-phosphate dehydrogenase-like 2 175564188 175568344 - 116893430 MODEL JAAIVD010000001 pseudo 626094239 Golga7 golgin A7 INVOLVED IN Golgi to plasma membrane protein transport (ortholog); Golgi to plasma membrane transport (ortholog); peptidyl-L-cysteine S-palmitoylation (ortholog); FOUND IN Golgi membrane (ortholog); Golgi stack (ortholog); palmitoyltransferase complex (ortholog) 13 63169425 63184512 + 30032202 116914504 MODEL JAAIVD010000008;XM_032918826;XM_032918827 XP_032774717;XP_032774718 golgin subfamily A member 7 protein-coding 626094254 C3H1orf162 chromosome 3 C1orf162 homolog ASSOCIATED WITH COVID-19 (ortholog) 3 52191196 52192780 + 116896412 MODEL JAAIVD010000012;XM_032897556 XP_032753447 transmembrane protein C1orf162 homolog protein-coding 626094261 Ccdc28a coiled-coil domain containing 28A ASSOCIATED WITH myoepithelioma (ortholog) 2 218657765 218671964 + 116892989 MODEL JAAIVD010000001;XM_032894949;XM_032894950;XM_032894951 XP_032750840;XP_032750841;XP_032750842 coiled-coil domain-containing protein 28A protein-coding 626094278 LOC116908252 NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like 8 90570470 90571006 - 116908252 MODEL JAAIVD010000027 pseudo 626094279 Plcg1 phospholipase C gamma 1 ENCODES a protein that exhibits calcium-dependent phospholipase C activity (ortholog); glutamate receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN calcium ion transport (ortholog); calcium-mediated signaling (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH acute myocardial infarction (ortholog); adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell projection (ortholog); cell-cell junction (ortholog); clathrin-coated vesicle (ortholog) 5 140027922 140058502 + 22301074;30032202 116902248 MODEL JAAIVD010000023;XM_032904665 XP_032760556 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase gamma-1 protein-coding 626094315 LOC116912757 heat shock protein HSP 90-beta-like 11 60211200 60213828 - 116912757 MODEL JAAIVD010000006 pseudo 626094316 LOC116899850 small nucleolar RNA SNORA17 4 56342442 56342577 + 116899850 MODEL JAAIVD010000003;XR_004387846 snorna 626094319 Slco6a1 solute carrier organic anion transporter family member 6A1 FOUND IN CatSper complex (ortholog) 4 168102467 168199700 - 22301074;30032202 116898586 MODEL JAAIVD010000003;XM_032899783 XP_032755674 protein-coding 626094329 LOC116909750 uncharacterized LOC116909750 9 90733595 90734286 + 116909750 MODEL JAAIVD010000002;XR_004389094 ncrna 626094333 Krt25 keratin 25 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN cytoskeleton organization (ortholog); hair cycle (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH Autosomal Recessive Woolly Hair (ortholog); autosomal recessive woolly hair 3 (ortholog); hypotrichosis 8 (ortholog); FOUND IN keratin filament (ortholog) 9 55125987 55133364 + 22301074;30032202 116909035 MODEL JAAIVD010000002;XM_032912515;XM_032912516 XP_032768406;XP_032768407 keratin, type I cytoskeletal 25 protein-coding 626094346 Hoxc6 homeobox C6 INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic skeletal system development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 260071139 260073397 - 22301074;30032202 116883298 MODEL JAAIVD010000025;XM_032884327 XP_032740218 homeobox protein Hox-C6 protein-coding 626094352 LOC116907594 vomeronasal type-1 receptor 3-like 8 3417054 3418028 - 22301074;30032202 116907594 MODEL JAAIVD010000027;XM_032910635 XP_032766526 protein-coding 626094355 LOC116913479 cerebellar degeneration-related protein 2-like 12 78161172 78162576 + 116913479 MODEL JAAIVD010000007;XM_032917681 XP_032773572 protein-coding 626094360 LOC116897639 U2 spliceosomal RNA 3 138590554 138590740 + 116897639 MODEL JAAIVD010000012;XR_004387618 snrna 626094363 LOC116909869 olfactory receptor 2AK2-like 9 39304255 39305175 - 22301074 116909869 MODEL JAAIVD010000002;XM_032913600 XP_032769491 protein-coding 626094366 Dpf1 double PHD fingers 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; FOUND IN nBAF complex (ortholog) 2 166633420 166647070 - 30032202 116892351 MODEL JAAIVD010000001;XM_032893993;XM_032893994;XM_032893995;XM_032893996;XM_032893997;XM_032893998;XM_032893999;XM_032894000;XM_032894001;XM_032894002;XM_032894003;XM_032894004;XM_032894006 XP_032749884;XP_032749885;XP_032749886;XP_032749887;XP_032749888;XP_032749889;XP_032749890;XP_032749891;XP_032749892;XP_032749893;XP_032749894;XP_032749895;XP_032749897 zinc finger protein neuro-d4 protein-coding 626094413 Efcab13 EF-hand calcium binding domain 13 9 74351373 74369337 - 22301074 116910364 MODEL JAAIVD010000002;XM_032914216 XP_032770107 EF-hand calcium-binding domain-containing protein 13 protein-coding 626094421 Styxl2 serine/threonine/tyrosine interacting like 2 10 45191190 45220313 - 22301074;30032202 116911677 MODEL JAAIVD010000005;XM_032915632 XP_032771523 Dusp27 dual specificity phosphatase 27, atypical;inactive dual specificity phosphatase 27 protein-coding 626094431 LOC116906111 histone H2A.V-like 7 79847963 79848367 + 22301074;30032202 116906111 MODEL JAAIVD010000026;XM_032909115 XP_032765006 protein-coding 626094435 Mlkl mixed lineage kinase domain like pseudokinase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein kinase activity (ortholog); INVOLVED IN defense response to virus (ortholog); execution phase of necroptosis (ortholog); necroptotic process (ortholog); ASSOCIATED WITH biotinidase deficiency (ortholog); chronic recurrent multifocal osteomyelitis (ortholog); maturity-onset diabetes of the young (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 31010491 31035069 - 22301074;30032202 116886513 MODEL JAAIVD010000011;XM_032888020;XM_032888021;XM_032888022;XM_032888023 XP_032743911;XP_032743912;XP_032743913;XP_032743914 mixed lineage kinase domain-like protein protein-coding 626094457 LOC116907779 olfactory receptor 7E24-like 8 15502307 15503287 + 22301074;30032202 116907779 MODEL JAAIVD010000027;XM_032910921 XP_032766812 protein-coding 626094461 Mrpl16 mitochondrial ribosomal protein L16 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 11094543 11100994 - 22301074;30032202 116890984 MODEL JAAIVD010000001;XM_032891657 XP_032747548 39S ribosomal protein L16, mitochondrial protein-coding 626094469 LOC116904702 small nucleolar RNA SNORA17 6 28624177 28624308 + 116904702 MODEL JAAIVD010000024;XR_004388397 snorna 626094472 Rab42 RAB42, member RAS oncogene family ASSOCIATED WITH autistic disorder (ortholog) 1 25947082 25948256 + 22301074;30032202 116886859 MODEL JAAIVD010000025;XM_032888317 XP_032744208 ras-related protein Rab-42 protein-coding 626094477 Plxna2 plexin A2 ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor activity (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); centrosome localization (ortholog); cerebellar granule cell precursor tangential migration (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN plasma membrane (ortholog) 10 72574807 72770261 + 22301074;30032202 116910871 MODEL JAAIVD010000005;XM_032914630 XP_032770521 plexin-A2 protein-coding 626094513 Hyal1 hyaluronidase 1 ENCODES a protein that exhibits chondroitin hydrolase activity (ortholog); hyalurononglucosaminidase activity (ortholog); virus receptor activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); mucopolysaccharidosis (ortholog); mucopolysaccharidosis IX (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular space (ortholog); hyaluranon cable (ortholog) 8 98894421 98898265 + 22301074;30032202 116907532 MODEL JAAIVD010000027;XM_032910548;XM_032910549 XP_032766439;XP_032766440 hyaluronidase-1 protein-coding 626094525 Mak16 MAK16 homolog FOUND IN nucleolus (ortholog) 13 55747291 55755798 + 30032202 116914508 MODEL JAAIVD010000008;XM_032918830;XM_032918831 XP_032774721;XP_032774722 protein MAK16 homolog protein-coding 626094542 Tex38 testis expressed 38 FOUND IN plasma membrane (ortholog) 1 39468805 39473308 - 116898115 MODEL JAAIVD010000025;XM_032899500;XM_032899502;XM_032899509 XP_032755391;XP_032755393;XP_032755400 testis-expressed protein 38 protein-coding 626094554 Znf251 zinc finger protein 251 INVOLVED IN hematopoietic stem cell homeostasis (ortholog) 1 249175869 249204001 - 22301074 116889981 MODEL JAAIVD010000025;XM_032890775 XP_032746666 protein-coding 626094563 LOC116897272 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4-like 3 199647061 199661054 - 116897272 MODEL JAAIVD010000012 pseudo 626094564 LOC116887488 RT1 class I histocompatibility antigen, AA alpha chain-like 18 9243757 9251454 - 30032202 116887488 MODEL JAAIVD010000013;XM_032889113;XM_032889114 XP_032745004;XP_032745005 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like protein-coding 626094579 Nfam1 NFAT activating protein with ITAM motif 1 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell receptor signaling pathway (ortholog); calcineurin-NFAT signaling cascade (ortholog); FOUND IN cell surface (ortholog); membrane (ortholog); membrane raft (ortholog) 1 252407021 252443369 - 30032202 116914367 MODEL JAAIVD010000025;XM_032918573 XP_032774464 NFAT activation molecule 1 protein-coding 626094589 Lum lumican ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN cartilage development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transforming growth factor beta1 production (ortholog); ASSOCIATED WITH Arterial Occlusive Diseases (ortholog); carotid artery disease (ortholog); coronary artery disease (ortholog); FOUND IN extracellular matrix (ortholog); fibrillar collagen trimer (ortholog) 1 176763272 176770338 + 22301074;30032202 116889995 MODEL JAAIVD010000025;XM_032890780 XP_032746671 protein-coding 626094596 Il1r2 interleukin 1 receptor type 2 ENCODES a protein that exhibits interleukin-1 binding (ortholog); interleukin-1 receptor activity (ortholog); INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of interleukin-1 alpha production (ortholog); negative regulation of interleukin-1-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH aggressive periodontitis (ortholog); allergic disease (ortholog); ankylosing spondylitis (ortholog); FOUND IN cytoplasm (ortholog) 4 116360928 116401015 + 22301074;30032202 116898148 MODEL JAAIVD010000003;XM_032899525 XP_032755416 interleukin-1 receptor type 2 protein-coding 626094609 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92750581 92750652 - 116904855 MODEL JAAIVD010000024 trna 626094610 LOC116883918 heterogeneous nuclear ribonucleoprotein A3-like 14 4871526 4872429 - 116883918 MODEL JAAIVD010000009 pseudo 626094611 Metap1d methionyl aminopeptidase type 1D, mitochondrial INVOLVED IN post-translational protein modification (ortholog); FOUND IN mitochondrion (ortholog) 5 48746506 48818860 + 22301074 116901506 MODEL JAAIVD010000023;XM_032903475;XM_032903476 XP_032759366;XP_032759367 methionine aminopeptidase 1D, mitochondrial protein-coding 626094628 N4bp2l2 NEDD4 binding protein 2 like 2 ENCODES a protein that exhibits enzyme binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN blastocyst development (ortholog); in utero embryonic development (ortholog); negative regulation of hematopoietic stem cell differentiation (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Dwarfism (ortholog); skin disease (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) 16 158485 220836 - 30032202 116885557 MODEL JAAIVD010000004;XM_032886849;XM_032886850;XM_032886851 XP_032742740;XP_032742741;XP_032742742 NEDD4-binding protein 2-like 2 protein-coding 626094648 Ywhaq tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein theta ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of monoatomic ion transmembrane transport (ortholog); protein targeting (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH osteoarthritis (ortholog); temporal lobe epilepsy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 7 37926741 37956148 - 30032202 116904909 MODEL JAAIVD010000026;XM_032907519 XP_032763410 14-3-3 protein theta protein-coding 626094658 LOC116893551 40S ribosomal protein S2-like 2 208596105 208631223 - 116893551 MODEL JAAIVD010000001 pseudo 626094659 LOC116895187 conserved oligomeric Golgi complex subunit 5-like 1 76740106 76743012 - 116895187 MODEL JAAIVD010000025 pseudo 626094660 Gabpa GA binding protein transcription factor subunit alpha ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); in utero embryonic development (ortholog); negative regulation of megakaryocyte differentiation (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 57399561 57426479 - 22301074;30032202 116899037 MODEL JAAIVD010000003;XM_032900502 XP_032756393 GA-binding protein alpha chain protein-coding 626094674 LOC116907464 60S ribosomal protein L12-like 8 10636489 10637003 + 116907464 MODEL JAAIVD010000027 pseudo 626094675 Asb18 ankyrin repeat and SOCS box containing 18 4 161952341 162014914 - 22301074 116898261 MODEL JAAIVD010000003;XM_032899613;XM_032899615 XP_032755504;XP_032755506 ankyrin repeat and SOCS box protein 18 protein-coding 626094685 Stmp1 short transmembrane mitochondrial protein 1 INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); mitochondrial respirasome assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial outer membrane (ortholog) 6 104401931 104411646 - 116903965 MODEL JAAIVD010000024;XM_032906760 XP_032762651 protein-coding 626094692 LOC116885890 RNA-binding protein FUS-like 16 14705279 14709731 - 116885890 MODEL JAAIVD010000004 pseudo 626094693 LOC116897577 small nucleolar RNA SNORA17 3 7777998 7778121 - 116897577 MODEL JAAIVD010000012 pseudo 626094694 LOC116910873 60S ribosomal protein L7-like 1 10 40082480 40083343 + 116910873 MODEL JAAIVD010000005 pseudo 626094695 Tmem50a transmembrane protein 50A FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); glial cell projection (ortholog) 1 23330416 23345387 + 30032202 116894639 MODEL JAAIVD010000025;XM_032896355 XP_032752246 protein-coding 626094706 LOC116895345 pancreatic alpha-amylase-like 3 45998256 46006588 + 116895345 MODEL JAAIVD010000012 pseudo 626094707 Gpam glycerol-3-phosphate acyltransferase, mitochondrial ENCODES a protein that exhibits glycerol-3-phosphate O-acyltransferase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); cellular response to insulin stimulus (ortholog); defense response to virus (ortholog); PARTICIPATES IN D-glycericacidemia pathway; familial lipoprotein lipase deficiency pathway; glycerol kinase deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 2 61062870 61096196 + 22301074;30032202 116893092 MODEL JAAIVD010000001;XM_032895036 XP_032750927 glycerol-3-phosphate acyltransferase 1, mitochondrial protein-coding 626094730 LOC116900424 olfactory receptor 4C16-like 5 70495687 70496619 - 22301074 116900424 MODEL JAAIVD010000023;XM_032902166 XP_032758057 protein-coding 626094733 Rhbdf2 rhomboid 5 homolog 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN negative regulation of protein secretion (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH genetic disease (ortholog); hepatoblastoma (ortholog); palmoplantar keratoderma-esophageal carcinoma syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 9 67443605 67470828 + 22301074;30032202 116909761 MODEL JAAIVD010000002;XM_032913447 XP_032769338 inactive rhomboid protein 2 protein-coding 626094756 Abhd12 abhydrolase domain containing 12, lysophospholipase ENCODES a protein that exhibits monoacylglycerol lipase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); adult walking behavior (ortholog); glycerophospholipid catabolic process (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) 5 130544299 130604728 - 30032202 116902099 MODEL JAAIVD010000023;XM_032904401;XM_032904402 XP_032760292;XP_032760293 lysophosphatidylserine lipase ABHD12 protein-coding 626094778 LOC116902269 neuroendocrine secretory protein 55 5 143699038 143700180 - 22301074 116902269 MODEL JAAIVD010000023;XM_032904698;XM_032904699 XP_032760589;XP_032760590 protein-coding 626094788 Tmem50b transmembrane protein 50B FOUND IN endoplasmic reticulum (ortholog) 4 53004346 53035496 + 30032202 116898992 MODEL JAAIVD010000003;XM_032900432;XM_032900433;XM_032900434 XP_032756323;XP_032756324;XP_032756325 protein-coding 626094805 Art3 ADP-ribosyltransferase 3 (inactive) 11 5240379 5266713 + 22301074;30032202 116912482 MODEL JAAIVD010000006;XM_032916548 XP_032772439 ecto-ADP-ribosyltransferase 3 protein-coding 626094818 Opn4 opsin 4 ENCODES a protein that exhibits 11-cis retinal binding (ortholog); G protein-coupled photoreceptor activity (ortholog); INVOLVED IN detection of temperature stimulus involved in thermoception (ortholog); entrainment of circadian clock by photoperiod (ortholog); G protein-coupled opsin signaling pathway (ortholog); FOUND IN plasma membrane (ortholog); sperm head plasma membrane (ortholog) 13 10366289 10375549 - 22301074 116914687 MODEL JAAIVD010000008;XM_032919108 XP_032774999 melanopsin protein-coding 626094832 Mxd1 MAX dimerization protein 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); Mad-Max complex (ortholog) 6 59640560 59662091 + 22301074;30032202 116903548 MODEL JAAIVD010000024;XM_032906162 XP_032762053 protein-coding 626094842 LOC116888404 uncharacterized LOC116888404 X 65881938 65883856 - 116888404 MODEL JAAIVD010000014;XR_004386308 ncrna 626094848 Ctsf cathepsin F ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN endoplasmic reticulum (ortholog); plasma membrane (ortholog) 2 2798600 2804384 - 30032202 116890757 MODEL JAAIVD010000001;XM_032891213 XP_032747104 protein-coding 626094865 LOC116894929 small nucleolar RNA SNORD115 2 140308986 140309063 - 116894929 MODEL JAAIVD010000001;XR_004387128 snorna 626094868 LOC116908821 olfactory receptor 2A12-like 9 39493470 39494462 - 22301074 116908821 MODEL JAAIVD010000002;XM_032912239 XP_032768130 protein-coding 626094872 LOC116887934 ornithine decarboxylase-like X 61321754 61324965 + 116887934 MODEL JAAIVD010000014 pseudo 626094873 Rab31 RAB31, member RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); Golgi to plasma membrane protein transport (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); early phagosome membrane (ortholog) 4 175635990 175765001 - 22301074 116899695 MODEL JAAIVD010000003;XM_032901720 XP_032757611 ras-related protein Rab-31 protein-coding 626094884 Glt8d1 glycosyltransferase 8 domain containing 1 ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Experimental Liver Cirrhosis (ortholog); frontotemporal dementia (ortholog) 13 6704633 6712813 + 22301074;30032202 116914427 MODEL JAAIVD010000008;XM_032918725 XP_032774616 glycosyltransferase 8 domain-containing protein 1 protein-coding 626094897 LOC116900777 WAP four-disulfide core domain protein 13-like 5 153324544 153327370 + 22301074 116900777 MODEL JAAIVD010000023;XM_032902487 XP_032758378 protein-coding 626094902 LOC116912783 uncharacterized LOC116912783 1 173846003 173858388 - 116912783 MODEL JAAIVD010000025;XM_032916981 XP_032772872 uncharacterized protein LOC116912783 protein-coding 626094910 LOC116885054 small nucleolar RNA SNORA17 15 31565397 31565531 + 116885054 MODEL JAAIVD010000010;XR_004385938 snorna 626094913 LOC116890399 U6 spliceosomal RNA 1 87805557 87805663 + 116890399 MODEL JAAIVD010000025;XR_004386602 snrna 626094916 Gpr174 G protein-coupled receptor 174 ENCODES a protein that exhibits bioactive lipid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of interleukin-2 production (ortholog); T cell homeostasis (ortholog); FOUND IN centriolar satellite (ortholog); plasma membrane (ortholog) X 64441740 64442784 - 22301074;30032202 116888334 MODEL JAAIVD010000014;XM_032889605 XP_032745496 probable G-protein coupled receptor 174 protein-coding 626094920 LOC116895864 arylacetamide deacetylase-like 2 3 95420971 95445821 - 22301074;30032202 116895864 MODEL JAAIVD010000012;XM_032896966 XP_032752857 protein-coding 626094927 LOC116890325 U6 spliceosomal RNA 1 28965355 28965461 - 116890325 MODEL JAAIVD010000025;XR_004386548 snrna 626094930 Wdfy4 WDFY family member 4 INVOLVED IN antigen processing and presentation (ortholog); CD8-positive, alpha-beta T cell activation (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disabilities (ortholog) 13 8684811 8895428 - 22301074 116914934 MODEL JAAIVD010000008;XM_032919360 XP_032775251 WD repeat- and FYVE domain-containing protein 4 protein-coding 626094994 LOC116889153 paraneoplastic antigen Ma3 homolog X 129331055 129333704 - 22301074 116889153 MODEL JAAIVD010000014;XM_032890319 XP_032746210 protein-coding 626095000 Kcnk7 potassium two pore domain channel subfamily K member 7 2 1988772 1991400 - 22301074;30032202 116890717 MODEL JAAIVD010000001;XM_032891165 XP_032747056 potassium channel subfamily K member 7 protein-coding 626095007 LOC116900588 sorbitol dehydrogenase-like 5 91937213 91938305 + 116900588 MODEL JAAIVD010000023 pseudo 626095008 Ccdc171 coiled-coil domain containing 171 ASSOCIATED WITH prostate cancer (ortholog) 1 70053344 70250974 - 116900558 MODEL JAAIVD010000025;XM_032902286 XP_032758177 coiled-coil domain-containing protein 171 protein-coding 626095033 Olig1 oligodendrocyte transcription factor 1 INVOLVED IN neuron fate commitment (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog) 4 53332777 53334967 - 22301074 116899000 MODEL JAAIVD010000003;XM_032900444 XP_032756335 protein-coding 626095038 LOC116895907 TD and POZ domain-containing protein 1-like 3 120615279 120616361 - 30032202 116895907 MODEL JAAIVD010000012;XM_032896989 XP_032752880 protein-coding 626095041 Vma12 vacuolar ATPase assembly factor VMA12 ENCODES a protein that exhibits oxysterol binding (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); intracellular iron ion homeostasis (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type IIp (ortholog); genetic disease (ortholog); FOUND IN COPI-coated vesicle membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment membrane (ortholog) 9 91931241 91935812 + 22301074;30032202 116910626 MODEL JAAIVD010000002;XM_032914574 XP_032770465 Tmem199 transmembrane protein 199 protein-coding 626095051 LOC116885630 RNA-binding motif protein, X-linked 2-like 1 229876331 229880870 - 116885630 MODEL JAAIVD010000025 pseudo 626095052 LOC116908418 small nucleolar RNA SNORA17 8 81399323 81399427 - 116908418 MODEL JAAIVD010000027 pseudo 626095053 Got1 glutamic-oxaloacetic transaminase 1 ENCODES a protein that exhibits carboxylic acid binding (ortholog); L-aspartate:2-oxoglutarate aminotransferase activity (ortholog); L-cysteine transaminase activity (ortholog); INVOLVED IN aspartate biosynthetic process (ortholog); aspartate metabolic process (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; alkaptonuria pathway; arginine and proline metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); amyloidosis (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon terminus (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 43007536 43031259 - 22301074;30032202 116891194 MODEL JAAIVD010000001;XM_032892015 XP_032747906 aspartate aminotransferase, cytoplasmic protein-coding 626095066 Inpp5j inositol polyphosphate-5-phosphatase J ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity (ortholog); INVOLVED IN negative regulation of microtubule polymerization (ortholog); negative regulation of neuron projection development (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; FOUND IN cytoplasm (ortholog); dendritic shaft (ortholog); growth cone (ortholog) 11 72490506 72501829 - 22301074;30032202 116912258 MODEL JAAIVD010000006;XM_032916242;XM_032916243;XR_004389437 XP_032772133;XP_032772134 phosphatidylinositol 4,5-bisphosphate 5-phosphatase A protein-coding 626095091 LOC116889530 small nucleolar RNA SNORA17 X 80484520 80484618 - 116889530 MODEL JAAIVD010000014 pseudo 626095092 LOC116885986 U6 spliceosomal RNA 16 43610835 43610928 + 116885986 MODEL JAAIVD010000004 pseudo 626095093 Trim24 tripartite motif containing 24 ENCODES a protein that exhibits chromatin binding (ortholog); estrogen response element binding (ortholog); histone H3K23ac reader activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); cellular response to estrogen stimulus (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; retinoic acid signaling pathway; ASSOCIATED WITH castration-resistant prostate carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); male germ cell nucleus (ortholog) 6 101826539 101944964 - 22301074 116903958 MODEL JAAIVD010000024;XM_032906744;XM_032906746 XP_032762635;XP_032762637 transcription intermediary factor 1-alpha protein-coding 626095120 Tsr2 TSR2 ribosome maturation factor ASSOCIATED WITH Diamond-Blackfan anemia 14 with mandibulofacial dysostosis (ortholog); Diamond-Blackfan anemia 15 with mandibulofacial dysostosis (ortholog) X 30181055 30189708 + 30032202 116888286 MODEL JAAIVD010000014;XM_032889562 XP_032745453 pre-rRNA-processing protein TSR2 homolog protein-coding 626095129 Fhl1 four and a half LIM domains 1 ENCODES a protein that exhibits channel activator activity (ortholog); potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of G1/S transition of mitotic cell cycle (ortholog); negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); diastolic heart failure (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 163344019 163348818 + 30032202 116907411 MODEL JAAIVD010000025;XM_032910373 XP_032766264 four and a half LIM domains protein 1 protein-coding 626095135 LOC116893244 40S ribosomal protein S27-like 2 126311264 126311614 - 22301074;30032202 116893244 MODEL JAAIVD010000001;XM_032895111 XP_032751002 protein-coding 626095138 LOC116888580 probable glutathione peroxidase 8 1 96406792 96407432 + 116888580 MODEL JAAIVD010000025 pseudo 626095139 LOC116913967 olfactory receptor 4M1 ENCODES a protein that exhibits olfactory receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); glucose homeostasis (ortholog); positive regulation of appetite (ortholog); FOUND IN plasma membrane (ortholog) 12 72921403 72922344 + 22301074 116913967 MODEL JAAIVD010000007;XM_032918235 XP_032774126 protein-coding 626095142 LOC116900143 olfactory receptor 1L6 5 14845360 14846295 + 22301074;30032202 116900143 MODEL JAAIVD010000023;XM_032901916 XP_032757807 protein-coding 626095145 LOC116893819 uncharacterized LOC116893819 2 47622019 47632057 + 116893819 MODEL JAAIVD010000001;XR_004387007 ncrna 626095150 LOC116889278 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like X 78332426 78335512 + 116889278 MODEL JAAIVD010000014 pseudo 626095151 LOC116895893 D-3-phosphoglycerate dehydrogenase-like 3 116027634 116029276 + 116895893 MODEL JAAIVD010000012 pseudo 626095152 Oosp2 oocyte secreted protein 2 INVOLVED IN oocyte maturation (ortholog); FOUND IN cytoplasm (ortholog); germinal vesicle (ortholog) 2 11198108 11209759 + 116893655 MODEL JAAIVD010000001;XM_032895372 XP_032751263 oocyte-secreted protein 2 protein-coding 626095159 Kitlg KIT ligand ENCODES a protein that exhibits cytokine activity (ortholog); stem cell factor receptor binding (ortholog); INVOLVED IN ectopic germ cell programmed cell death (ortholog); embryonic hemopoiesis (ortholog); extrinsic apoptotic signaling pathway in absence of ligand (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autosomal dominant nonsyndromic deafness 69 (ortholog); carcinoma (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); filopodium (ortholog) 1 108779125 108861932 + 22301074;30032202 116902229 MODEL JAAIVD010000025;XM_032904638;XM_032904645;XM_032904655;XM_032904661 XP_032760529;XP_032760536;XP_032760546;XP_032760552 protein-coding 626095178 Nfilz NFIL3 like basic leucine zipper 1 158931247 158932086 + 22301074;30032202 116908317 MODEL JAAIVD010000025;XM_032911616 XP_032767507 long intergenic non-protein coding RNA 1862 protein-coding 626095181 Washc3 WASH complex subunit 3 PARTICIPATES IN retromer-mediated pathway; FOUND IN WASH complex (ortholog) 1 167282166 167326393 + 22301074;30032202 116907743 MODEL JAAIVD010000025;XM_032910882;XM_032910889 XP_032766773;XP_032766780 protein-coding 626095196 LOC116906027 28S ribosomal protein S10, mitochondrial-like 7 31447444 31447947 + 116906027 MODEL JAAIVD010000026 pseudo 626095197 Akt2 AKT serine/threonine kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); molecular function activator activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to high light intensity (ortholog); cellular response to hormone stimulus (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN altered insulin responsive facilitative sugar transporter mediated glucose transport pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Breast Neoplasms (ortholog); colorectal cancer (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 168301436 168351906 - 22301074 116892420 MODEL JAAIVD010000001;XM_032894101;XM_032894102;XM_032894103 XP_032749992;XP_032749993;XP_032749994 RAC-beta serine/threonine-protein kinase protein-coding 626095221 Gpr22 G protein-coupled receptor 22 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); FOUND IN plasma membrane (ortholog) 7 45096487 45104385 - 22301074;30032202 116904955 MODEL JAAIVD010000026;XM_032907612;XM_032907613 XP_032763503;XP_032763504 G-protein coupled receptor 22 protein-coding 626095232 Hmgcr 3-hydroxy-3-methylglutaryl-CoA reductase ENCODES a protein that exhibits coenzyme A binding (ortholog); GTPase regulator activity (ortholog); hydroxymethylglutaryl-CoA reductase (NADPH) activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); endoplasmic reticulum (ortholog); peroxisomal membrane (ortholog) 3 199829135 199850278 + 22301074;30032202 116897273 MODEL JAAIVD010000012;XM_032899004 XP_032754895 3-hydroxy-3-methylglutaryl-Coenzyme A reductase protein-coding 626095256 Slc25a53 solute carrier family 25 member 53 FOUND IN mitochondrion (ortholog) X 88877052 88890711 + 116888068 MODEL JAAIVD010000014;XM_032889448 XP_032745339 protein-coding 626095263 LOC116895173 40S ribosomal protein S10-like 3 85218491 85219731 + 116895173 MODEL JAAIVD010000012 pseudo 626095264 LOC116914999 elongation factor 2-like 13 29202647 29203052 + 116914999 MODEL JAAIVD010000008 pseudo 626095265 Pias2 protein inhibitor of activated STAT 2 ENCODES a protein that exhibits DNA binding (ortholog); nuclear androgen receptor binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); DNA-templated transcription (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN androgen signaling pathway; Jak-Stat signaling pathway; FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 54904379 54991320 - 22301074;30032202 116884647 MODEL JAAIVD010000010;XM_032885794;XM_032885795;XM_032885796;XM_032885797;XM_032885799;XM_032885800;XM_032885801;XM_032885802;XM_032885803 XP_032741685;XP_032741686;XP_032741687;XP_032741688;XP_032741690;XP_032741691;XP_032741692;XP_032741693;XP_032741694 E3 SUMO-protein ligase PIAS2 protein-coding 626095308 Chst10 carbohydrate sulfotransferase 10 ENCODES a protein that exhibits HNK-1 sulfotransferase activity (ortholog); sulfotransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); learning (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN Golgi membrane (ortholog) 4 115064791 115092106 - 22301074;30032202 116899313 MODEL JAAIVD010000003;XM_032900977;XM_032900978 XP_032756868;XP_032756869 protein-coding 626095321 LOC116884084 U2 spliceosomal RNA 14 49186682 49186851 - 116884084 MODEL JAAIVD010000009 pseudo 626095322 Smtnl1 smoothelin like 1 ENCODES a protein that exhibits calmodulin binding (ortholog); CH domain binding (ortholog); disordered domain specific binding (ortholog); INVOLVED IN muscle organ morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of vasoconstriction (ortholog); FOUND IN contractile muscle fiber (ortholog); cytoplasm (ortholog); I band (ortholog) 5 62191664 62199504 - 22301074;30032202 116900226 MODEL JAAIVD010000023;XM_032901977 XP_032757868 smoothelin-like protein 1 protein-coding 626095332 Fam83a family with sequence similarity 83 member A ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell population proliferation (ortholog); epidermal growth factor receptor signaling pathway (ortholog); positive regulation of adipose tissue development (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Neoplasm Invasiveness (ortholog); Ovarian Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 1 232313235 232337113 + 30032202 116890098 MODEL JAAIVD010000025;XM_032890847 XP_032746738 protein FAM83A protein-coding 626095339 LOC116909346 uncharacterized LOC116909346 9 43798899 43800367 + 116909346 MODEL JAAIVD010000002;XR_004389067 ncrna 626095343 LOC116913772 uncharacterized LOC116913772 12 52668295 52710306 + 116913772 MODEL JAAIVD010000007;XR_004389640;XR_004389641 ncrna 626095351 Aldh8a1 aldehyde dehydrogenase 8 family member A1 ENCODES a protein that exhibits retinal dehydrogenase (NAD+) activity (ortholog); INVOLVED IN 9-cis-retinoic acid biosynthetic process (ortholog); retinal metabolic process (ortholog); retinoic acid metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog) 2 215184671 215203887 - 30032202 116894692 MODEL JAAIVD010000001;XM_032896391;XM_032896392;XM_032896393 XP_032752282;XP_032752283;XP_032752284 2-aminomuconic semialdehyde dehydrogenase protein-coding 626095365 LOC116898010 charged multivesicular body protein 6-like 4 70734099 70734842 - 116898010 MODEL JAAIVD010000003 pseudo 626095366 LOC116887897 DNA polymerase alpha catalytic subunit X 51798176 51864091 + 22301074;30032202 116887897 MODEL JAAIVD010000014;XM_032889375 XP_032745266 protein-coding 626095393 LOC116894503 UBX domain-containing protein 2A-like 2 172884450 172885333 - 116894503 MODEL JAAIVD010000001 pseudo 626095394 Tmem51 transmembrane protein 51 1 16133451 16138571 + 116893171 MODEL JAAIVD010000025;XM_032895082 XP_032750973 protein-coding 626095400 LOC116885854 40S ribosomal protein S29-like 16 3324018 3324205 - 116885854 MODEL JAAIVD010000004 pseudo 626095401 LOC116906047 meteorin-like protein 7 46277732 46281921 - 116906047 MODEL JAAIVD010000026 pseudo 626095402 LOC116889963 olfactory receptor 6C76-like 1 161956945 161957917 + 116889963 MODEL JAAIVD010000025 pseudo 626095403 Pcbp2 poly(rC) binding protein 2 ENCODES a protein that exhibits C-rich single-stranded DNA binding (ortholog); DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); chromatin looping (ortholog); IRES-dependent viral translational initiation (ortholog); PARTICIPATES IN iron homeostasis pathway; iron storage pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 260582567 260608439 - 30032202 116883376 MODEL JAAIVD010000025;XM_032884494;XM_032884502;XM_032884510;XM_032884518;XM_032884525;XM_032884529;XM_032884538;XM_032884546;XM_032884553;XM_032884560;XM_032884568;XM_032884576 XP_032740385;XP_032740393;XP_032740401;XP_032740409;XP_032740416;XP_032740420;XP_032740429;XP_032740437;XP_032740444;XP_032740451;XP_032740459;XP_032740467 poly(rC)-binding protein 2 protein-coding 626095444 LOC116887160 60S ribosomal protein L21-like 18 28554132 28554851 - 116887160 MODEL JAAIVD010000013 pseudo 626095445 Btbd2 BTB domain containing 2 ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN P-body (ortholog) 1 154231954 154246034 + 22301074;30032202 116904957 MODEL JAAIVD010000025;XM_032907619 XP_032763510 BTB/POZ domain-containing protein 2 protein-coding 626095457 Tmprss11e transmembrane serine protease 11E ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN cognition (ortholog); proteolysis (ortholog); FOUND IN plasma membrane (ortholog) 11 199191 240410 + 22301074;30032202 116912626 MODEL JAAIVD010000006;XM_032916744 XP_032772635 transmembrane protease serine 11E protein-coding 626095470 Serpina6 serpin family A member 6 ENCODES a protein that exhibits molecular carrier activity (ortholog); steroid binding (ortholog); INVOLVED IN glucocorticoid metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); corticosteroid-binding globulin deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog) 7 114913894 114924275 - 30032202 116905869 MODEL JAAIVD010000026;XM_032908858 XP_032764749 corticosteroid-binding globulin protein-coding 626095479 LOC116907333 olfactory receptor 145-like 8 31776202 31777188 + 116907333 MODEL JAAIVD010000027 pseudo 626095480 Znf202 zinc finger protein 202 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromosome (ortholog); nuclear body (ortholog); nucleolus (ortholog) 8 34788687 34809513 + 30032202 116906923 MODEL JAAIVD010000027;XM_032909846;XM_032909847;XM_032909848;XM_032909849 XP_032765737;XP_032765738;XP_032765739;XP_032765740 protein-coding 626095502 LOC116912752 UDP-glucuronosyltransferase 2B1 11 1803216 1814104 + 22301074 116912752 MODEL JAAIVD010000006;XM_032916898 XP_032772789 protein-coding 626095512 LOC116898369 60S ribosomal protein L9-like 4 63359230 63359984 + 116898369 MODEL JAAIVD010000003 pseudo 626095513 LOC116888635 vigilin-like X 80055195 80057220 - 30032202 116888635 MODEL JAAIVD010000014;XM_032889929 XP_032745820 protein-coding 626095516 Trnas-aga transfer RNA serine (anticodon AGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 132814982 132815063 - 116890642 MODEL JAAIVD010000025 trna 626095517 LOC116885150 cytochrome P450 3A9 16 15324813 15356224 - 22301074;30032202 116885150 MODEL JAAIVD010000004;XM_032886357 XP_032742248 protein-coding 626095534 Adi1 acireductone dioxygenase 1 ENCODES a protein that exhibits oxidoreductase activity (ortholog); INVOLVED IN L-methionine salvage from methylthioadenosine (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 7 42124251 42131124 + 22301074;30032202 116904931 MODEL JAAIVD010000026;XM_032907562 XP_032763453 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase protein-coding 626095542 LOC116906071 Ig heavy chain V region 102-like 7 62515443 62520566 - 116906071 MODEL JAAIVD010000026 pseudo 626095543 LOC116910721 small nucleolar RNA SNORA17 9 7514379 7514503 + 116910721 MODEL JAAIVD010000002 pseudo 626095544 LOC116890034 Krueppel-like factor 5 1 42319491 42322574 - 116890034 MODEL JAAIVD010000025;XM_032890834 XP_032746725 protein-coding 626095548 Ppp2r1a protein phosphatase 2 scaffold subunit Aalpha ENCODES a protein that exhibits protein antigen binding (ortholog); protein heterodimerization activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); female meiotic nuclear division (ortholog); meiotic sister chromatid cohesion, centromeric (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 36 (ortholog); Disease Progression (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); cytosol (ortholog) 2 181111180 181139348 + 22301074;30032202 116892750 MODEL JAAIVD010000001;XM_032894628 XP_032750519 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A alpha isoform protein-coding 626095567 LOC116884397 60S ribosomal protein L29-like 15 63353921 63375647 + 116884397 MODEL JAAIVD010000010 pseudo 626095568 Edar ectodysplasin A receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); hair follicle development (ortholog); odontogenesis of dentin-containing tooth (ortholog); ASSOCIATED WITH anodontia (ortholog); ectodermal dysplasia 10A (ortholog); ectodermal dysplasia 10B (ortholog); FOUND IN apical part of cell (ortholog); plasma membrane (ortholog) 18 24753078 24781425 - 30032202 116886896 MODEL JAAIVD010000013;XM_032888357 XP_032744248 tumor necrosis factor receptor superfamily member EDAR protein-coding 626095583 Hk1 hexokinase 1 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); establishment of protein localization to mitochondrion (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; fructose and mannose metabolic pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); anemia (ortholog); Animal Disease Models (ortholog); FOUND IN caveola (ortholog); cilium (ortholog); cytosol (ortholog) 18 28105199 28152044 - 22301074;30032202 116886861 MODEL JAAIVD010000013;XM_032888314 XP_032744205 hexokinase-1 protein-coding 626095604 Krr1 KRR1 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN chromosome (ortholog); intercellular bridge (ortholog); nucleolus (ortholog) 1 190194736 190206142 + 22301074;30032202 116908922 MODEL JAAIVD010000025;XM_032912384 XP_032768275 KRR1 small subunit processome component homolog protein-coding 626095618 Msrb1 methionine sulfoxide reductase B1 ENCODES a protein that exhibits actin binding (ortholog); peptide-methionine (R)-S-oxide reductase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN actin filament polymerization (ortholog); innate immune response (ortholog); protein repair (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 9 2024246 2029988 + 22301074 116909939 MODEL JAAIVD010000002;XM_032913713 XP_032769604 methionine-R-sulfoxide reductase B1 protein-coding 626095627 Tmem232 transmembrane protein 232 INVOLVED IN flagellated sperm motility (ortholog); maintenance of protein complex location (ortholog); spermatid cytoplasm removal during spermiation of flagellated sperm (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN outer dense fiber (ortholog) 4 175292252 175510254 - 116898288 MODEL JAAIVD010000003;XM_032899638;XM_032899639 XP_032755529;XP_032755530 protein-coding 626095647 LOC116897487 small nucleolar RNA SNORD45 3 7732638 7732718 + 116897487 MODEL JAAIVD010000012;XR_004387508 snorna 626095650 Pax5 paired box 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adult behavior (ortholog); cerebral cortex development (ortholog); embryonic cranial skeleton morphogenesis (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 1818384 1994981 + 30032202 116885739 MODEL JAAIVD010000025;XM_032887050;XM_032887058;XM_032887067 XP_032742941;XP_032742949;XP_032742958 paired box protein Pax-5 protein-coding 626095668 LOC116894201 olfactory receptor 490-like 2 106299953 106300862 - 22301074;30032202 116894201 MODEL JAAIVD010000001;XM_032895914 XP_032751805 protein-coding 626095671 Clcn5 chloride voltage-gated channel 5 ENCODES a protein that exhibits identical protein binding (ortholog); voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); endocytosis (ortholog); renal system process (ortholog); ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); Dent disease (ortholog); Dent disease 1 (ortholog); FOUND IN apical part of cell (ortholog); cytosol (ortholog); endosome (ortholog) X 14799024 14950899 + 22301074;30032202 116888563 MODEL JAAIVD010000014;XM_032889868 XP_032745759 H(+)/Cl(-) exchange transporter 5 protein-coding 626095689 LOC116913892 40S ribosomal protein S13-like 12 19364148 19364605 - 22301074;30032202 116913892 MODEL JAAIVD010000007;XM_032918176 XP_032774067 protein-coding 626095693 LOC116889119 heat shock protein HSP 90-beta-like 1 121704196 121706175 - 116889119 MODEL JAAIVD010000025 pseudo 626095694 LOC116893345 olfactory receptor 13A1-like 2 156775657 156780222 + 116893345 MODEL JAAIVD010000001 pseudo 626095695 LOC116883254 60S acidic ribosomal protein P0-like 14 72498698 72549346 + 116883254 MODEL JAAIVD010000009 pseudo 626095696 Tapbp TAP binding protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein folding chaperone (ortholog); TAP complex binding (ortholog); INVOLVED IN antigen processing and presentation of endogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent (ortholog); defense response (ortholog); ASSOCIATED WITH MHC class I deficiency (ortholog); MHC CLASS I DEFICIENCY 3 (ortholog); severe combined immunodeficiency (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog); MHC class I peptide loading complex (ortholog) 18 6928111 6937391 + 22301074 116887578 MODEL JAAIVD010000013;XM_032889202 XP_032745093 tapasin protein-coding 626095708 Psme3 proteasome activator subunit 3 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); identical protein binding (ortholog); MDM2/MDM4 family protein binding (ortholog); INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway (ortholog); regulation of proteasomal protein catabolic process (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytosol (ortholog) 9 60618871 60626597 + 22301074;30032202 116910573 MODEL JAAIVD010000002;XM_032914497 XP_032770388 proteasome activator complex subunit 3 protein-coding 626095723 LOC116888285 probable global transcription activator SNF2L2 1 81562469 81562997 - 116888285 MODEL JAAIVD010000025 pseudo 626095724 Cdx1 caudal type homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); methyl-CpG binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone morphogenesis (ortholog); pattern specification process (ortholog) 15 70910435 70928509 + 22301074;30032202 116884435 MODEL JAAIVD010000010;XM_032885523 XP_032741414 homeobox protein CDX-1 protein-coding 626095731 Dtx2 deltex E3 ubiquitin ligase 2 INVOLVED IN Notch signaling pathway (ortholog); ASSOCIATED WITH Brain Neoplasms (ortholog); genetic disease (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog) 16 17982040 18021633 - 22301074;30032202 116885521 MODEL JAAIVD010000004;XM_032886816;XM_032886817 XP_032742707;XP_032742708 probable E3 ubiquitin-protein ligase DTX2 protein-coding 626095747 LOC116885781 60S ribosomal protein L18-like 16 4840306 4840689 + 30032202 116885781 MODEL JAAIVD010000004;XM_032887109 XP_032743000 protein-coding 626095750 LOC116885062 U2 spliceosomal RNA 15 44675392 44675556 + 116885062 MODEL JAAIVD010000010 pseudo 626095751 Atrip ATR interacting protein ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); ASSOCIATED WITH retinal vasculopathy with cerebral leukodystrophy (ortholog); Seckel syndrome (ortholog); FOUND IN ATR-ATRIP complex (ortholog); nucleoplasm (ortholog) 8 100328054 100342088 - 30032202 116907637 MODEL JAAIVD010000027;XM_032910700;XR_004388833;XR_004388834 XP_032766591 ATR-interacting protein protein-coding 626095774 Cpne2 copine 2 INVOLVED IN cellular response to calcium ion (ortholog); FOUND IN clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) 17 1427266 1464852 + 30032202 116886405 MODEL JAAIVD010000011;XM_032887877 XP_032743768 copine-2 protein-coding 626095794 Pcbp1 poly(rC) binding protein 1 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); mRNA binding (ortholog); RNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); viral RNA genome replication (ortholog); PARTICIPATES IN iron homeostasis pathway; iron storage pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytosol (ortholog) 6 59780070 59782034 + 30032202 116903549 MODEL JAAIVD010000024;XM_032906163 XP_032762054 poly(rC)-binding protein 1 protein-coding 626095800 Vangl2 VANGL planar cell polarity protein 2 INVOLVED IN anterior/posterior pattern specification (ortholog); apical protein localization (ortholog); cell migration involved in kidney development (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH genetic disease (ortholog); Kidney Neoplasms (ortholog); neural tube defect (ortholog); FOUND IN apical cytoplasm (ortholog); apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 10 51118714 51143316 - 22301074;30032202 116911467 MODEL JAAIVD010000005;XM_032915446;XM_032915447;XM_032915448 XP_032771337;XP_032771338;XP_032771339 vang-like protein 2 protein-coding 626095817 Abcb6 ATP binding cassette subfamily B member 6 (LAN blood group) ENCODES a protein that exhibits ABC-type heme transporter activity (ortholog); ABC-type transporter activity (ortholog); ATP binding (ortholog); INVOLVED IN brain development (ortholog); cellular detoxification of cadmium ion (ortholog); heme B biosynthetic process (ortholog); ASSOCIATED WITH acute intermittent porphyria (ortholog); acute porphyria (ortholog); coloboma (ortholog); FOUND IN cytosol (ortholog); early endosome membrane (ortholog); endolysosome membrane (ortholog) 4 148530916 148539585 - 22301074;30032202 116899523 MODEL JAAIVD010000003;XM_032901387;XM_032901389 XP_032757278;XP_032757280 ATP binding cassette subfamily B member 6 (Langereis blood group);ATP-binding cassette sub-family B member 6, mitochondrial protein-coding 626095845 LOC116895554 serine/arginine-rich splicing factor 7-like 3 124812331 124813039 - 116895554 MODEL JAAIVD010000012 pseudo 626095846 LOC116892956 zinc finger protein 816-like 1 13008527 13147882 - 30032202 116892956 MODEL JAAIVD010000025;XM_032894910 XP_032750801 protein-coding 626095855 LOC116903302 complement C1s subcomponent-like 6 23614834 23617089 + 22301074;30032202 116903302 MODEL JAAIVD010000024;XM_032905726 XP_032761617 protein-coding 626095860 LOC116907789 uncharacterized LOC116907789 8 55457950 55462919 - 116907789 MODEL JAAIVD010000027;XR_004388846 ncrna 626095865 LOC116911772 bolA-like protein 2 10 40218376 40218765 + 30032202 116911772 MODEL JAAIVD010000005;XM_032915765 XP_032771656 protein-coding 626095869 LOC116901069 zinc finger protein 431-like 5 142708112 142708842 - 116901069 MODEL JAAIVD010000023 pseudo 626095870 LOC116913219 ubiquitin-like protein FUBI 12 69420465 69421082 + 22301074;30032202 116913219 MODEL JAAIVD010000007;XM_032917394 XP_032773285 protein-coding 626095874 LOC116910126 hepatitis A virus cellular receptor 1 homolog 9 29380466 29411755 + 30032202 116910126 MODEL JAAIVD010000002;XM_032913960 XP_032769851 protein-coding 626095887 LOC116885457 40S ribosomal protein S8-like 16 14609768 14610468 - 116885457 MODEL JAAIVD010000004;XR_004386010 pseudo 626095890 Lrrc40 leucine rich repeat containing 40 3 3516232 3550266 - 22301074;30032202 116896126 MODEL JAAIVD010000012;XM_032897107;XM_032897108 XP_032752998;XP_032752999 leucine-rich repeat-containing protein 40 protein-coding 626095912 LOC116898454 glutathione S-transferase A6 4 98685501 98701340 - 22301074;30032202 116898454 MODEL JAAIVD010000003;XM_032899714 XP_032755605 protein-coding 626095922 LOC116891226 oogenesin-2-like 1 52628129 52628781 + 116891226 MODEL JAAIVD010000025 pseudo 626095923 LOC116895770 methylglutaconyl-CoA hydratase, mitochondrial-like 3 47708216 47708948 + 116895770 MODEL JAAIVD010000012 pseudo 626095924 LOC116914164 U4 spliceosomal RNA 12 3986035 3986203 + 116914164 MODEL JAAIVD010000007 pseudo 626095925 LOC116886595 40S ribosomal protein S16-like 1 20375026 20375591 + 22301074;30032202 116886595 MODEL JAAIVD010000025;XM_032888117 XP_032744008 protein-coding 626095930 Cited2 Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone acetyltransferase binding (ortholog); LBD domain binding (ortholog); INVOLVED IN adrenal cortex formation (ortholog); adrenal gland development (ortholog); blood vessel development (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH atrial heart septal defect 8 (ortholog); brain ischemia (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 219190449 219192930 - 22301074;30032202 116892996 MODEL JAAIVD010000001;XM_032894959 XP_032750850 cbp/p300-interacting transactivator 2 protein-coding 626095936 Faap100 FA core complex associated protein 100 FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 63642613 63652963 + 22301074;30032202 116908786 MODEL JAAIVD010000002;XM_032912173 XP_032768064 Fanconi anemia core complex-associated protein 100 protein-coding 626095950 LOC116889430 U6 spliceosomal RNA X 64753225 64753321 + 116889430 MODEL JAAIVD010000014 pseudo 626095951 LOC116899073 BTB/POZ domain-containing protein 10-like 1 102902799 102904217 + 116899073 MODEL JAAIVD010000025 pseudo 626095952 Fdxacb1 ferredoxin-fold anticodon binding domain containing 1 8 45235397 45240186 + 22301074;30032202 116907669 MODEL JAAIVD010000027;XM_032910763 XP_032766654 ferredoxin-fold anticodon-binding domain-containing protein 1 protein-coding 626095961 LOC116913178 L-gulonolactone oxidase 12 58434074 58457296 + 22301074 116913178 MODEL JAAIVD010000007;XM_032917377 XP_032773268 protein-coding 626095976 LOC116905597 40S ribosomal protein SA-like 7 8410299 8414440 - 22301074;30032202 116905597 MODEL JAAIVD010000026;XM_032908598 XP_032764489 protein-coding 626095982 Dhx40 DEAH-box helicase 40 9 83974095 84013435 + 22301074;30032202 116908903 MODEL JAAIVD010000002;XM_032912358 XP_032768249 probable ATP-dependent RNA helicase DHX40 protein-coding 626096004 LOC116892787 vomeronasal type-2 receptor 116-like 2 185612641 185623280 + 22301074;30032202 116892787 MODEL JAAIVD010000001;XM_032894660 XP_032750551 protein-coding 626096012 LOC116906180 proteasome maturation protein-like 7 108934760 108935234 - 116906180 MODEL JAAIVD010000026 pseudo 626096013 LOC116900477 olfactory receptor 4C12 INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH prostate cancer (ortholog) 5 71552989 71553915 - 22301074 116900477 MODEL JAAIVD010000023;XM_032902213 XP_032758104 protein-coding 626096016 LOC116904491 telomeric repeat-binding factor 1-like 6 151817680 151819261 - 22301074 116904491 MODEL JAAIVD010000024;XM_032907289 XP_032763180 protein-coding 626096020 LOC116904745 small nucleolar RNA SNORA17 6 127088804 127088923 - 116904745 MODEL JAAIVD010000024 pseudo 626096021 Coq6 coenzyme Q6, monooxygenase ENCODES a protein that exhibits 2-methoxy-6-polyprenolphenol 4-hydroxylase activity (ortholog); 4-hydroxy-3-all-trans-polyprenylbenzoate oxygenase activity (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH genetic disease (ortholog); primary coenzyme Q10 deficiency 6 (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 7 98465465 98476309 + 22301074;30032202 116905268 MODEL JAAIVD010000026;XM_032908119;XR_004388510 XP_032764010 ubiquinone biosynthesis monooxygenase COQ6, mitochondrial protein-coding 626096041 Slk STE20 like kinase ENCODES a protein that exhibits histone kinase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to tumor necrosis factor (ortholog); cellular response to type II interferon (ortholog); cytoplasmic microtubule organization (ortholog); ASSOCIATED WITH Reperfusion Injury (ortholog); substance-related disorder (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); perinuclear region of cytoplasm (ortholog) 2 47112793 47168943 + 22301074 116891269 MODEL JAAIVD010000001;XM_032892163;XM_032892164 XP_032748054;XP_032748055 STE20-like serine/threonine-protein kinase protein-coding 626096067 Trim71 tripartite motif containing 71 ENCODES a protein that exhibits miRNA binding (ortholog); translation repressor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); G1/S transition of mitotic cell cycle (ortholog); ASSOCIATED WITH Congenital Communicating Hydrocephalus 1 (ortholog); COVID-19 (ortholog); CRYPTOZOOSPERMIA (ortholog); FOUND IN P-body (ortholog) 8 105117306 105166695 - 22301074;30032202 116908133 MODEL JAAIVD010000027;XM_032911423 XP_032767314 E3 ubiquitin-protein ligase TRIM71 protein-coding 626096073 LOC116902961 heterogeneous nuclear ribonucleoprotein A3-like 6 125050968 125052053 - 116902961 MODEL JAAIVD010000024 pseudo 626096074 Asb15 ankyrin repeat and SOCS box containing 15 ASSOCIATED WITH renal cell carcinoma (ortholog) 6 114761751 114776804 - 22301074;30032202 116902929 MODEL JAAIVD010000024;XM_032905253 XP_032761144 ankyrin repeat and SOCS box protein 15 protein-coding 626096086 Sycp2 synaptonemal complex protein 2 INVOLVED IN animal organ morphogenesis (ortholog); ectopic germ cell programmed cell death (ortholog); female meiotic nuclear division (ortholog); ASSOCIATED WITH CRYPTOZOOSPERMIA (ortholog); prostate cancer (ortholog); spermatogenic failure 1 (ortholog); FOUND IN lateral element (ortholog); synaptonemal complex (ortholog) 5 155416157 155473030 - 116902394 MODEL JAAIVD010000023;XM_032904911 XP_032760802 protein-coding 626096133 Ankk1 ankyrin repeat and kinase domain containing 1 INVOLVED IN cellular response to retinoic acid (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN cell projection (ortholog); cytoplasm (ortholog); nucleus (ortholog) 8 43903272 43911049 - 22301074;30032202 116907122 MODEL JAAIVD010000027;XM_032910095 XP_032765986 ankyrin repeat and protein kinase domain-containing protein 1 protein-coding 626096143 LOC116902594 small nucleolar RNA SNORA17 5 20473353 20473481 + 116902594 MODEL JAAIVD010000023;XR_004388184 snorna 626096146 Tac4 tachykinin precursor 4 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); substance K receptor binding (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); negative regulation of sensory perception of pain (ortholog); negative regulation of systemic arterial blood pressure (ortholog); FOUND IN extracellular space (ortholog) 9 59113625 59121447 - 116909590 MODEL JAAIVD010000002;XM_032913212 XP_032769103 tachykinin-4 protein-coding 626096155 LOC116909068 ran guanine nucleotide release factor-like 9 89252009 89252569 + 116909068 MODEL JAAIVD010000002 pseudo 626096156 LOC116892766 olfactory receptor 10A3-like 2 182595392 182596366 + 22301074 116892766 MODEL JAAIVD010000001;XM_032894645 XP_032750536 protein-coding 626096160 LOC116889227 peptidyl-prolyl cis-trans isomerase D-like X 70263470 70264582 + 116889227 MODEL JAAIVD010000014 pseudo 626096161 LOC116900407 olfactory receptor 4C11-like 5 70181325 70182254 + 116900407 MODEL JAAIVD010000023 pseudo 626096162 Rpl12 ribosomal protein L12 ENCODES a protein that exhibits large ribosomal subunit rRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of translational elongation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytoplasm (ortholog); cytosolic large ribosomal subunit (ortholog); cytosolic ribosome (ortholog) 5 2666523 2668799 - 1977388;22301074;30032202 116901128 MODEL JAAIVD010000023;X53504;XM_032902720 CAA37581;XP_032758611 60S ribosomal protein L12 protein-coding 626096173 Ptprr protein tyrosine phosphatase receptor type R ENCODES a protein that exhibits protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN ERBB2 signaling pathway (ortholog); in utero embryonic development (ortholog); negative regulation of epithelial cell migration (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 194183355 194432708 + 22301074;30032202 116909100 MODEL JAAIVD010000025;XM_032912575;XM_032912583;XM_032912590 XP_032768466;XP_032768474;XP_032768481 receptor-type tyrosine-protein phosphatase R protein-coding 626096197 LOC116893820 mitochondrial import inner membrane translocase subunit Tim23-like 2 49541103 49541721 - 116893820 MODEL JAAIVD010000001 pseudo 626096198 LOC116893559 60S acidic ribosomal protein P0-like 2 214055724 214056571 + 116893559 MODEL JAAIVD010000001 pseudo 626096199 Sec61b SEC61 translocon subunit beta ENCODES a protein that exhibits epidermal growth factor binding (ortholog); ribosome binding (ortholog); INVOLVED IN ERAD pathway (ortholog); retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) 1 100563686 100571913 + 22301074;30032202 116901998 MODEL JAAIVD010000025;XM_032904260 XP_032760151 protein transport protein Sec61 subunit beta protein-coding 626096207 LOC116887766 U6 spliceosomal RNA 18 11831211 11831321 + 116887766 MODEL JAAIVD010000013;XR_004386264 snrna 626096210 LOC116895176 60S ribosomal protein L34-like 3 96382978 96383584 + 22301074;30032202 116895176 MODEL JAAIVD010000012;XM_032896531 XP_032752422 protein-coding 626096214 Vat1 vesicle amine transport 1 INVOLVED IN negative regulation of mitochondrial fusion (ortholog); FOUND IN mitochondrial outer membrane (ortholog) 9 60747377 60755106 - 22301074 116908827 MODEL JAAIVD010000002;XM_032912247 XP_032768138 synaptic vesicle membrane protein VAT-1 homolog protein-coding 626096224 LOC116903800 gamma-1-syntrophin 1 143403625 143685031 - 30032202 116903800 MODEL JAAIVD010000025;XM_032906495;XM_032906505 XP_032762386;XP_032762396 protein-coding 626096246 Emc7 ER membrane protein complex subunit 7 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN EMC complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 90785627 90795379 + 22301074;30032202 116901746 MODEL JAAIVD010000023;XM_032903882;XM_032903883 XP_032759773;XP_032759774 protein-coding 626096260 LOC116891845 uncharacterized LOC116891845 2 108446524 108454991 + 116891845 MODEL JAAIVD010000001;XR_004386864;XR_004386865;XR_004386866 ncrna 626096270 LOC116909342 olfactory receptor 1361-like 9 38427769 38428710 + 22301074;30032202 116909342 MODEL JAAIVD010000002;XM_032912892 XP_032768783 protein-coding 626096273 LOC116899228 uncharacterized LOC116899228 4 90781044 90834410 + 116899228 MODEL JAAIVD010000003;XR_004387698 ncrna 626096278 Gamt guanidinoacetate N-methyltransferase ENCODES a protein that exhibits guanidinoacetate N-methyltransferase activity (ortholog); identical protein binding (ortholog); S-adenosylmethionine-dependent methyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); creatine biosynthetic process (ortholog); embryonic liver development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); cerebral creatine deficiency syndrome (ortholog); epilepsy (ortholog) 1 154621419 154624150 + 22301074;30032202 116905245 MODEL JAAIVD010000025;XM_032908081 XP_032763972 protein-coding 626096288 LOC116895239 uncharacterized LOC116895239 3 23981494 23983749 - 116895239 MODEL JAAIVD010000012 pseudo 626096289 Apool apolipoprotein O like PARTICIPATES IN mitochondrial protein import pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN MICOS complex (ortholog); mitochondrion (ortholog) X 62152725 62182945 + 22301074;30032202 116887941 MODEL JAAIVD010000014;XM_032889398 XP_032745289 MICOS complex subunit MIC27 protein-coding 626096300 LOC116884268 uncharacterized protein C7orf50 homolog 15 16388933 16389495 + 116884268 MODEL JAAIVD010000010 pseudo 626096301 LOC116884022 cytochrome c oxidase subunit 6B1-like 14 12261312 12261610 + 116884022 MODEL JAAIVD010000009 pseudo 626096302 Hdhd5 haloacid dehalogenase like hydrolase domain containing 5 FOUND IN mitochondrion (ortholog) 6 26215946 26238375 + 30032202 116903328 MODEL JAAIVD010000024;XM_032905772;XM_032905773 XP_032761663;XP_032761664 haloacid dehalogenase-like hydrolase domain-containing 5 protein-coding 626096319 LOC116911023 60S ribosomal protein L37-like 10 7460279 7460568 + 116911023 MODEL JAAIVD010000005 pseudo 626096320 LOC116914117 small nucleolar RNA SNORA17 12 35076968 35077099 + 116914117 MODEL JAAIVD010000007;XR_004389681 snorna 626096323 Pnpla5 patatin like domain 5, triacylglycerol lipase ENCODES a protein that exhibits triacylglycerol lipase activity (ortholog) 1 253507896 253518596 - 30032202 116890164 MODEL JAAIVD010000025;XM_032890899 XP_032746790 patatin like phospholipase domain containing 5;patatin-like phospholipase domain-containing protein 5 protein-coding 626096336 Socs5 suppressor of cytokine signaling 5 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN cellular response to low-density lipoprotein particle stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; Jak-Stat signaling pathway 7 5857803 5889851 - 22301074;30032202 116905751 MODEL JAAIVD010000026;XM_032908720;XM_032908721 XP_032764611;XP_032764612 protein-coding 626096345 C2H11orf58 chromosome 2 C11orf58 homolog 2 85473297 85484513 - 116891627 MODEL JAAIVD010000001;XM_032892838 XP_032748729 small acidic protein protein-coding 626096354 Tram1 translocation associated membrane protein 1 INVOLVED IN cotranslational protein targeting to membrane (ortholog); protein insertion into ER membrane (ortholog); response to unfolded protein (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 148184309 148210659 - 22301074;30032202 116903985 MODEL JAAIVD010000025;XM_032906794 XP_032762685 translocating chain-associated membrane protein 1 protein-coding 626096369 Agfg1 ArfGAP with FG repeats 1 INVOLVED IN acrosome assembly (ortholog); intermediate filament organization (ortholog); spermatid nucleus differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); oligoasthenoteratozoospermia (ortholog); FOUND IN cell projection (ortholog); cytoplasmic vesicle (ortholog); neuronal cell body (ortholog) 4 155696216 155752305 + 22301074;30032202 116899568 MODEL JAAIVD010000003;XM_032901478;XM_032901479;XM_032901480 XP_032757369;XP_032757370;XP_032757371 arf-GAP domain and FG repeat-containing protein 1 protein-coding 626096390 Cripto cripto, EGF-CFC family member ENCODES a protein that exhibits coreceptor activity (ortholog); growth factor activity (ortholog); nodal binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); anterior/posterior axis specification, embryo (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN glypican signaling pathway; ASSOCIATED WITH colon cancer (ortholog); congenital heart disease (ortholog); Forebrain Defects (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 8 101522762 101527674 - 116908264 MODEL JAAIVD010000027;XM_032911514 XP_032767405 Tdgf1 teratocarcinoma-derived growth factor 1 protein-coding 626096398 Tlr7 toll like receptor 7 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); single-stranded RNA binding (ortholog); siRNA binding (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to virus (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); allergic contact dermatitis (ortholog); anogenital venereal wart (ortholog); FOUND IN cytoplasm (ortholog); early phagosome (ortholog); endoplasmic reticulum (ortholog) X 37526182 37529773 + 22301074;30032202 116889231 U5LLF7 MODEL JAAIVD010000014;KC811793;KC811794;KC811795;XM_032890382 AGX25588;AGX25589;AGX25590;XP_032746273 toll-like receptor 7 protein-coding 626096402 Acads acyl-CoA dehydrogenase short chain ENCODES a protein that exhibits acyl-CoA dehydrogenase activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN butyrate catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH alcohol use disorder (ortholog); congestive heart failure (ortholog); genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 16 38704436 38713557 + 22301074;30032202 116885639 MODEL JAAIVD010000004;XM_032886947 XP_032742838 short-chain specific acyl-CoA dehydrogenase, mitochondrial protein-coding 626096416 Crb1 crumbs cell polarity complex component 1 INVOLVED IN blood vessel remodeling (ortholog); camera-type eye photoreceptor cell development (ortholog); cellular response to light stimulus (ortholog); ASSOCIATED WITH bestrophinopathy (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 10 19564407 19737873 - 22301074 116911282 MODEL JAAIVD010000005;XM_032915188 XP_032771079 protein crumbs homolog 1 protein-coding 626096432 LOC116913276 60S ribosomal protein L4-like 12 85547149 85554316 + 116913276 MODEL JAAIVD010000007 pseudo 626096433 LOC116902860 olfactory receptor-like protein OLF3 6 97640703 97641635 - 22301074 116902860 MODEL JAAIVD010000024;XM_032905189 XP_032761080 protein-coding 626096436 Foxl3 forkhead box L3 16 14375242 14376913 - 30032202 116885947 MODEL JAAIVD010000004;XM_032887264 XP_032743155 forkhead box L1-like protein-coding 626096442 Lrrc10 leucine rich repeat containing 10 ENCODES a protein that exhibits actin binding (ortholog); alpha-actinin binding (ortholog); INVOLVED IN cardiac muscle cell development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoskeleton (ortholog); mitochondrion (ortholog); myofibril (ortholog) 1 195201310 195202574 + 22301074 116890021 MODEL JAAIVD010000025;XM_032890802 XP_032746693 leucine-rich repeat-containing protein 10 protein-coding 626096447 Thyn1 thymocyte nuclear protein 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleus (ortholog) 8 22893270 22902394 + 30032202 116908037 MODEL JAAIVD010000027;XM_032911309;XM_032911310 XP_032767200;XP_032767201 protein-coding 626096462 LOC116897747 40S ribosomal protein S4-like 4 1188198 1188749 + 116897747 MODEL JAAIVD010000003 pseudo 626096463 LOC116895563 zinc finger protein 296-like 3 133480453 133481744 - 116895563 MODEL JAAIVD010000012 pseudo 626096464 LOC116888877 60S ribosomal protein L19-like X 60746970 60747579 - 22301074;30032202 116888877 MODEL JAAIVD010000014;XM_032890142 XP_032746033 protein-coding 626096468 Bmp6 bone morphogenetic protein 6 ENCODES a protein that exhibits BMP receptor binding (ortholog); growth factor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); bone development (ortholog); cellular response to BMP stimulus (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Acute Otitis Media (ortholog); adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN enzyme activator complex (ortholog); extracellular space (ortholog); vesicle (ortholog) 14 57406236 57558194 + 22301074;30032202 116883276 MODEL JAAIVD010000009;XM_032884264 XP_032740155 protein-coding 626096479 Gpc4 glypican 4 INVOLVED IN regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); glutamatergic synapse (ortholog); presynaptic membrane (ortholog) X 114114996 114224377 - 22301074;30032202 116888802 MODEL JAAIVD010000014;XM_032890083 XP_032745974 glypican-4 protein-coding 626096492 Cd83 CD83 molecule INVOLVED IN negative regulation of interleukin-4 production (ortholog); positive regulation of CD4-positive, alpha-beta T cell differentiation (ortholog); positive regulation of interleukin-10 production (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN external side of plasma membrane (ortholog) 14 62797522 62817771 + 116883808 MODEL JAAIVD010000009;XM_032885055;XM_032885057 XP_032740946;XP_032740948 CD83 antigen protein-coding 626096506 Agps alkylglycerone phosphate synthase ENCODES a protein that exhibits alkylglycerone-phosphate synthase activity (ortholog); INVOLVED IN lipid biosynthetic process (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); Experimental Sarcoma (ortholog); genetic disease (ortholog); FOUND IN peroxisome (ortholog) 5 53179426 53279181 + 22301074;30032202 116901539 MODEL JAAIVD010000023;XM_032903522 XP_032759413 alkyldihydroxyacetonephosphate synthase, peroxisomal protein-coding 626096530 Syt7 synaptotagmin 7 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calmodulin binding (ortholog); INVOLVED IN calcium ion regulated lysosome exocytosis (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; insulin secretion pathway; ASSOCIATED WITH myoepithelioma (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); dense core granule (ortholog) 2 9862079 9925027 + 22301074;30032202 116890951 MODEL JAAIVD010000001;XM_032891597;XM_032891598;XM_032891599;XM_032891600;XM_032891601;XM_032891602 XP_032747488;XP_032747489;XP_032747490;XP_032747491;XP_032747492;XP_032747493 synaptotagmin-7 protein-coding 626096552 LOC116900300 olfactory receptor 8K3-like 5 63778232 63779173 - 22301074;30032202 116900300 MODEL JAAIVD010000023;XM_032902055 XP_032757946 protein-coding 626096555 LOC116884143 U1 spliceosomal RNA 14 57030762 57030909 - 116884143 MODEL JAAIVD010000009 pseudo 626096556 Ust uronyl 2-sulfotransferase ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate binding (ortholog); chondroitin 2-sulfotransferase activity (ortholog); dermatan 2-sulfotransferase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan biosynthetic process (ortholog); establishment of cell polarity (ortholog); regulation of axonogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); attention deficit hyperactivity disorder (ortholog); basal cell carcinoma (ortholog) 2 228554571 228851496 + 22301074;30032202 116893032 MODEL JAAIVD010000001;XM_032894994;XM_032894995 XP_032750885;XP_032750886 protein-coding 626096571 Dchs1 dachsous cadherin-related 1 INVOLVED IN anatomical structure morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); cell migration (ortholog); ASSOCIATED WITH CAKUT (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN apical part of cell (ortholog) 2 104594369 104628517 - 22301074;30032202 116891830 MODEL JAAIVD010000001;XM_032893194 XP_032749085 protocadherin-16 protein-coding 626096596 Carmil2 capping protein regulator and myosin 1 linker 2 ENCODES a protein that exhibits phospholipid binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin filament network formation (ortholog); establishment of protein localization (ortholog); establishment or maintenance of cell polarity (ortholog); ASSOCIATED WITH combined immunodeficiency (ortholog); combined T cell and B cell immunodeficiency (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cell leading edge (ortholog); cell-cell junction (ortholog) 17 25420624 25432758 + 22301074;30032202 116886061 MODEL JAAIVD010000011;XM_032887369 XP_032743260 capping protein, Arp2/3 and myosin-I linker protein 2 protein-coding 626096639 Pank4 pantothenate kinase 4 (inactive) ENCODES a protein that exhibits pantothenate kinase activity (ortholog); phosphatase activity (ortholog); ASSOCIATED WITH cataract (ortholog); Cataract 49 (ortholog) 1 5739573 5756246 - 22301074;30032202 116892061 MODEL JAAIVD010000025;XM_032893532 XP_032749423 4'-phosphopantetheine phosphatase protein-coding 626096662 LOC116893828 zinc finger protein 431-like 2 54976704 54987704 - 30032202 116893828 MODEL JAAIVD010000001;XM_032895545;XM_032895546 XP_032751436;XP_032751437 protein-coding 626096673 Tacr1 tachykinin receptor 1 ENCODES a protein that exhibits substance P receptor activity (ortholog); INVOLVED IN aggressive behavior (ortholog); angiotensin-mediated drinking behavior (ortholog); associative learning (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); acute necrotizing pancreatitis (ortholog); alcohol use disorder (ortholog); FOUND IN cell body (ortholog); cell periphery (ortholog); cell surface (ortholog) 6 63634443 63795694 - 22301074;30032202 116903647 MODEL JAAIVD010000024;XM_032906306 XP_032762197 substance-P receptor protein-coding 626096682 Esrp1 epithelial splicing regulatory protein 1 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); branching involved in salivary gland morphogenesis (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 109 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 132317296 132370873 + 30032202 116903399 MODEL JAAIVD010000025;XM_032905914 XP_032761805 protein-coding 626096702 LOC116895979 baculoviral IAP repeat-containing protein 1f-like 3 157669470 157683439 + 30032202 116895979 MODEL JAAIVD010000012;XM_032897015 XP_032752906 protein-coding 626096711 LOC116912367 SEC14-like protein 3 11 73056177 73066423 + 30032202 116912367 MODEL JAAIVD010000006;XM_032916427 XP_032772318 protein-coding 626096725 Bsnd barttin CLCNK type accessory subunit beta ENCODES a protein that exhibits chloride channel activity (ortholog); chloride channel regulator activity (ortholog); INVOLVED IN chloride transport (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); Bartter disease (ortholog); Bartter disease type 4A (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 1 48327004 48335753 + 22301074;30032202 116887586 MODEL JAAIVD010000025;XM_032889213;XM_032889219 XP_032745104;XP_032745110 barttin protein-coding 626096740 Tmbim1 transmembrane BAX inhibitor motif containing 1 ENCODES a protein that exhibits death receptor binding (ortholog); INVOLVED IN negative regulation of catalytic activity (ortholog); negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of Fas signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endosome membrane (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 4 147740758 147757584 - 30032202 116899497 MODEL JAAIVD010000003;XM_032901335;XM_032901336;XM_032901337 XP_032757226;XP_032757227;XP_032757228 protein lifeguard 3 protein-coding 626096763 LOC116892145 60S ribosomal protein L5-like 1 60842839 60860715 + 116892145 MODEL JAAIVD010000025 pseudo 626096764 LOC116890602 U1 spliceosomal RNA 1 182787932 182788092 - 116890602 MODEL JAAIVD010000025;XR_004386753 snrna 626096767 LOC116904375 glyceraldehyde-3-phosphate dehydrogenase-like 6 89010412 89021047 + 22301074;30032202 116904375 MODEL JAAIVD010000024;XM_032907248 XP_032763139 protein-coding 626096771 Tmem95 transmembrane protein 95 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal membrane (ortholog) 9 49485453 49490512 - 22301074;30032202 116909742 MODEL JAAIVD010000002;XM_032913419;XM_032913420 XP_032769310;XP_032769311 protein-coding 626096786 LOC116908841 40S ribosomal protein S27-like 9 42694765 42695070 + 116908841 MODEL JAAIVD010000002 pseudo 626096787 LOC116910614 solute carrier family 22 member 5 9 36333698 36361231 - 22301074 116910614 MODEL JAAIVD010000002;XM_032914560;XM_032914561;XM_032914562 XP_032770451;XP_032770452;XP_032770453 protein-coding 626096807 LOC116887896 uncharacterized LOC116887896 X 51779866 51785004 - 116887896 MODEL JAAIVD010000014 pseudo 626096808 LOC116888398 A-kinase anchor protein 17B X 102766758 102821968 - 22301074 116888398 MODEL JAAIVD010000014;XM_032889675 XP_032745566 protein-coding 626096818 Atp6v0c ATPase H+ transporting V0 subunit c ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN negative regulation of autophagic cell death (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH early-onset epilepsy 3 (ortholog); epilepsy (ortholog); thyroid gland carcinoma (ortholog); FOUND IN membrane (ortholog); proton-transporting V-type ATPase complex (ortholog); synaptic vesicle (ortholog) 9 1461281 1466732 - 22301074 116908735 MODEL JAAIVD010000002;XM_032912082 XP_032767973 V-type proton ATPase 16 kDa proteolipid subunit protein-coding 626096825 Zswim6 zinc finger SWIM-type containing 6 INVOLVED IN neuron projection morphogenesis (ortholog); regulation of neuron migration (ortholog); striatal medium spiny neuron differentiation (ortholog); ASSOCIATED WITH acromelic frontonasal dysostosis (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN stereocilium (ortholog) 3 189792743 189985648 - 22301074;30032202 116897208 MODEL JAAIVD010000012;XM_032898917 XP_032754808 zinc finger SWIM domain-containing protein 6 protein-coding 626096843 Ptpn2 protein tyrosine phosphatase non-receptor type 2 ENCODES a protein that exhibits integrin binding (ortholog); non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); erythrocyte differentiation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH Crohn's disease (ortholog); pre-eclampsia (ortholog); rheumatoid arthritis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 15 63550436 63618438 + 22301074 116884791 MODEL JAAIVD010000010;XM_032886025;XM_032886026;XM_032886027 XP_032741916;XP_032741917;XP_032741918 tyrosine-protein phosphatase non-receptor type 2 protein-coding 626096864 Arih2 ariadne RBR E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN defense response to virus (ortholog); hematopoietic stem cell proliferation (ortholog); innate immune response (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); myoepithelioma (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); nucleoplasm (ortholog) 8 99932360 99988847 - 22301074;30032202 116907606 MODEL JAAIVD010000027;XM_032910656;XM_032910657;XM_032910658;XM_032910660;XM_032910661;XR_004388829 XP_032766547;XP_032766548;XP_032766549;XP_032766551;XP_032766552 E3 ubiquitin-protein ligase ARIH2 protein-coding 626096896 LOC116905388 uncharacterized LOC116905388 7 116127711 116129493 - 116905388 MODEL JAAIVD010000026;XR_004388519 ncrna 626096900 Dhx32 DEAH-box helicase 32 (putative) ASSOCIATED WITH Thyroid Neoplasms (ortholog); FOUND IN mitochondrion (ortholog) 2 68104072 68157559 + 30032202 116891385 MODEL JAAIVD010000001;XM_032892399 XP_032748290 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 protein-coding 626096916 LOC116887781 small nucleolar RNA SNORA36 family 18 2330881 2331011 - 116887781 MODEL JAAIVD010000013;XR_004386278 snorna 626096919 LOC116893691 ADAMTS-like protein 1 1 67545592 67724900 - 22301074;30032202 116893691 MODEL JAAIVD010000025;XM_032895441 XP_032751332 protein-coding 626096935 Pin4 peptidylprolyl cis/trans isomerase, NIMA-interacting 4 ENCODES a protein that exhibits bent DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN rRNA processing (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); mitochondrial matrix (ortholog) X 59912964 59919738 + 22301074;30032202 116888753 MODEL JAAIVD010000014;XM_032890046;XM_032890047 XP_032745937;XP_032745938 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 protein-coding 626096946 LOC116898203 uncharacterized LOC116898203 4 138564623 138574466 - 116898203 MODEL JAAIVD010000003;XR_004387642 ncrna 626096950 LOC116902623 small nucleolar RNA SNORD90 5 15166111 15166221 - 116902623 MODEL JAAIVD010000023;XR_004388201 snorna 626096953 Gorasp2 golgi reassembly stacking protein 2 INVOLVED IN establishment of protein localization to plasma membrane (ortholog); Golgi organization (ortholog); response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) 5 47968468 47972133 + 116901497 MODEL JAAIVD010000023;XM_032903464 XP_032759355 Golgi reassembly-stacking protein 2 protein-coding 626096960 Mavs mitochondrial antiviral signaling protein ENCODES a protein that exhibits CARD domain binding (ortholog); DNA-binding transcription factor binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to exogenous dsRNA (ortholog); ASSOCIATED WITH influenza (ortholog); influenza A (ortholog); Metapneumovirus infections (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog) 5 110959649 110973551 + 116901989 MODEL JAAIVD010000023;XM_032904240 XP_032760131 mitochondrial antiviral-signaling protein protein-coding 626096971 LOC116906571 uncharacterized LOC116906571 8 60682975 60683598 - 116906571 MODEL JAAIVD010000027;XR_004388748 ncrna 626096975 LOC116894791 uncharacterized LOC116894791 1 23863524 23868273 - 116894791 MODEL JAAIVD010000025;XR_004387040 ncrna 626096980 St13 ST13 Hsp70 interacting protein ENCODES a protein that exhibits dATP binding (ortholog); Hsp70 protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of protein refolding (ortholog); positive regulation of protein folding (ortholog); response to bacterium (ortholog); PARTICIPATES IN androgen signaling pathway; chaperone mediated autophagy pathway; FOUND IN cytosol (ortholog); protein-containing complex (ortholog) 1 251115651 251152261 - 22301074;30032202 116913944 MODEL JAAIVD010000025;XM_032918213 XP_032774104 hsc70-interacting protein protein-coding 626096996 Fcho2 FCH and mu domain containing endocytic adaptor 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); membrane invagination (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); plasma membrane (ortholog) 3 197780844 197883228 + 30032202 116897253 MODEL JAAIVD010000012;XM_032898986;XM_032898987 XP_032754877;XP_032754878 F-BAR domain only protein 2 protein-coding 626097031 LOC116885261 protein S100-A11-like 16 30168532 30168944 - 116885261 MODEL JAAIVD010000004 pseudo 626097032 Slc25a1 solute carrier family 25 member 1 ENCODES a protein that exhibits citrate secondary active transmembrane transporter activity (ortholog); tricarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN mitochondrial citrate transmembrane transport (ortholog); negative regulation of ferroptosis (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); combined D-2- and L-2-hydroxyglutaric aciduria (ortholog); Congenital Myasthenic Syndrome 23 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 4 3196314 3199348 - 30032202 116898658 MODEL JAAIVD010000003;XM_032899892 XP_032755783 tricarboxylate transport protein, mitochondrial protein-coding 626097045 LOC116895735 zinc finger protein 560-like 3 28598150 28600633 + 22301074 116895735 MODEL JAAIVD010000012;XM_032896912 XP_032752803 protein-coding 626097051 LOC116888922 beta-sarcoglycan-like X 59553254 59554007 + 116888922 MODEL JAAIVD010000014 pseudo 626097052 LOC116889543 small nucleolar RNA SNORA11 X 89079372 89079493 + 116889543 MODEL JAAIVD010000014;XR_004386478 snorna 626097055 Syt12 synaptotagmin 12 INVOLVED IN long-term synaptic potentiation (ortholog); presynaptic modulation of chemical synaptic transmission (ortholog); spontaneous exocytosis of neurotransmitter (ortholog); FOUND IN hippocampal mossy fiber to CA3 synapse (ortholog); presynapse (ortholog); synaptic vesicle (ortholog) 2 3200978 3210634 + 22301074;30032202 116890769 MODEL JAAIVD010000001;XM_032891235 XP_032747126 synaptotagmin-12 protein-coding 626097064 LOC116895793 histone H3-like centromeric protein CSE4 3 61013769 61035883 - 22301074;30032202 116895793 MODEL JAAIVD010000012;XM_032896936 XP_032752827 protein-coding 626097070 LOC116912905 60S ribosomal protein L39-like 11 53322632 53322844 - 116912905 MODEL JAAIVD010000006 pseudo 626097071 LOC116905630 ALK tyrosine kinase receptor-like 7 20848598 21037051 + 22301074 116905630 MODEL JAAIVD010000026;XM_032908612 XP_032764503 protein-coding 626097078 Zar1l zygote arrest 1 like ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN negative regulation of translation (ortholog); oocyte maturation (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog) 16 67253 79117 - 30032202 116885182 MODEL JAAIVD010000004;XM_032886396;XM_032886397 XP_032742287;XP_032742288 ZAR1-like protein protein-coding 626097087 Mccc1 methylcrotonyl-CoA carboxylase subunit 1 ENCODES a protein that exhibits methylcrotonoyl-CoA carboxylase activity (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-methylcrotonyl-CoA carboxylase 1 deficiency (ortholog); 3-methylcrotonyl-CoA carboxylase deficiency (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN methylcrotonoyl-CoA carboxylase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 117969450 118019245 + 22301074;30032202 116896937 MODEL JAAIVD010000012;XM_032898504 XP_032754395 methylcrotonoyl-CoA carboxylase 1;methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial protein-coding 626097110 Kcnj6 potassium inwardly rectifying channel subfamily J member 6 ENCODES a protein that exhibits G-protein activated inward rectifier potassium channel activity (ortholog); G-protein alpha-subunit binding (ortholog); inward rectifier potassium channel activity (ortholog); INVOLVED IN cellular response to morphine (ortholog); response to electrical stimulus (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Down syndrome (ortholog); heroin dependence (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 4 49655008 49896917 + 22301074;30032202 116898959 MODEL JAAIVD010000003;XM_032900377 XP_032756268 G protein-activated inward rectifier potassium channel 2 protein-coding 626097119 Egr3 early growth response 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH Ataxia (ortholog); COVID-19 (ortholog) 12 54265407 54270890 - 30032202 116913716 MODEL JAAIVD010000007;XM_032918013;XM_032918014;XM_032918015 XP_032773904;XP_032773905;XP_032773906 early growth response protein 3 protein-coding 626097132 Kcnv2 potassium voltage-gated channel modifier subfamily V member 2 ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 14 (ortholog) 2 27395317 27409981 + 22301074;30032202 116893755 MODEL JAAIVD010000001;XM_032895460 XP_032751351 potassium voltage-gated channel subfamily V member 2 protein-coding 626097138 Sod2 superoxide dismutase 2 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); apoptotic mitochondrial changes (ortholog); cellular response to ethanol (ortholog); PARTICIPATES IN hypertension pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney tubular necrosis (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrial nucleoid (ortholog) 2 191754042 191761832 + 22301074;30032202 116892841 MODEL JAAIVD010000001;XM_032894729 XP_032750620 superoxide dismutase [Mn], mitochondrial protein-coding 626097147 LOC116912155 40S ribosomal protein S2-like 1 167746836 167758272 - 116912155 MODEL JAAIVD010000025 pseudo 626097148 LOC116910456 olfactory receptor 1D2-like 9 33683555 33684496 + 22301074;30032202 116910456 MODEL JAAIVD010000002;XM_032914321 XP_032770212 protein-coding 626097151 Rexo5 RNA exonuclease 5 FOUND IN nucleolus (ortholog) 2 81828156 81884480 - 22301074;30032202 116891595 MODEL JAAIVD010000001;XM_032892785;XM_032892786;XR_004386850 XP_032748676;XP_032748677 protein-coding 626097178 LOC116887741 small nucleolar RNA SNORA26 18 5994912 5995032 + 116887741 MODEL JAAIVD010000013;XR_004386247 snorna 626097181 St6gal1 ST6 beta-galactoside alpha-2,6-sialyltransferase 1 ENCODES a protein that exhibits beta-galactoside alpha-2,6-sialyltransferase activity (ortholog); protein homodimerization activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN N-acetylneuraminate metabolic process (ortholog); negative regulation of chemotaxis (ortholog); negative regulation of macrophage apoptotic process (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); allergic contact dermatitis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Golgi medial cisterna (ortholog); Golgi membrane (ortholog); Golgi trans cisterna (ortholog) 4 8010349 8136022 + 22301074 116898726 MODEL JAAIVD010000003;XM_032900031;XM_032900032;XM_032900033 XP_032755922;XP_032755923;XP_032755924 beta-galactoside alpha-2,6-sialyltransferase 1 protein-coding 626097198 Abhd6 abhydrolase domain containing 6, acylglycerol lipase ENCODES a protein that exhibits monoacylglycerol lipase activity (ortholog); phospholipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); long-term synaptic depression (ortholog); lysobisphosphatidic acid metabolic process (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 12 78443697 78487602 + 22301074 116914004 MODEL JAAIVD010000007;XM_032918276 XP_032774167 monoacylglycerol lipase ABHD6 protein-coding 626097211 LOC116884388 40S ribosomal protein S17-like 15 57693411 57693831 + 116884388 MODEL JAAIVD010000010 pseudo 626097212 Gdpd4 glycerophosphodiester phosphodiesterase domain containing 4 2 96241306 96324666 + 22301074;30032202 116893148 MODEL JAAIVD010000001;XM_032895071 XP_032750962 glycerophosphodiester phosphodiesterase domain-containing protein 4 protein-coding 626097231 Lmna lamin A/C ENCODES a protein that exhibits identical protein binding (ortholog); protein phosphatase 1 binding (ortholog); structural constituent of nuclear lamina (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular senescence (ortholog); DNA double-strand break attachment to nuclear envelope (ortholog); PARTICIPATES IN atherosclerosis pathway; ASSOCIATED WITH achalasia (ortholog); aortic valve disease 2 (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); FOUND IN lamin filament (ortholog); nuclear envelope (ortholog); nuclear lamina (ortholog) 3 65061475 65082737 + 116896685 MODEL JAAIVD010000012;XM_032898069 XP_032753960 lamin protein-coding 626097247 Stx11 syntaxin 11 INVOLVED IN cellular response to type II interferon (ortholog); cytotoxic T cell degranulation (ortholog); natural killer cell degranulation (ortholog); ASSOCIATED WITH Chediak-Higashi syndrome (ortholog); Familial Hemophagocytic Lymphohistiocytoses (ortholog); familial hemophagocytic lymphohistiocytosis 4 (ortholog); FOUND IN phagocytic vesicle (ortholog) 2 224240615 224267322 + 22301074;30032202 116894703 MODEL JAAIVD010000001;XM_032896400 XP_032752291 syntaxin-11 protein-coding 626097253 C1H1orf167 chromosome 1 C1orf167 homolog ASSOCIATED WITH coronary artery disease (ortholog); Stroke (ortholog) 1 12707467 12722113 + 22301074 116890261 MODEL JAAIVD010000025;XM_032890983 XP_032746874 uncharacterized protein C1orf167 homolog protein-coding 626097266 Treml2 triggering receptor expressed on myeloid cells like 2 ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN T cell activation (ortholog); FOUND IN cell surface (ortholog) 4 81617907 81627349 - 30032202 116898031 MODEL JAAIVD010000003;XM_032899420;XM_032899421 XP_032755311;XP_032755312 trem-like transcript 2 protein protein-coding 626097276 Setd6 SET domain containing 6, protein lysine methyltransferase ENCODES a protein that exhibits NF-kappaB binding (ortholog); protein-lysine N-methyltransferase activity (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog); peptidyl-lysine monomethylation (ortholog); regulation of inflammatory response (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 2535553 2538531 + 22301074;30032202 116886527 MODEL JAAIVD010000011;XM_032888046 XP_032743937 N-lysine methyltransferase SETD6 protein-coding 626097287 Cep44 centrosomal protein 44 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 13 32106540 32125796 - 30032202 116915078 MODEL JAAIVD010000008;XM_032919497;XM_032919498;XM_032919499;XM_032919500 XP_032775388;XP_032775389;XP_032775390;XP_032775391 centrosomal protein of 44 kDa protein-coding 626097312 Fam193b family with sequence similarity 193 member B FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 14 73854656 73886673 - 30032202 116915219 MODEL JAAIVD010000009;XM_032919599;XM_032919600;XM_032919602;XM_032919603;XM_032919604;XM_032919605;XM_032919606;XM_032919607 XP_032775490;XP_032775491;XP_032775493;XP_032775494;XP_032775495;XP_032775496;XP_032775497;XP_032775498 protein FAM193B protein-coding 626097348 Fbxo25 F-box protein 25 INVOLVED IN protein ubiquitination (ortholog); FOUND IN nucleolus (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 13 69836901 69867422 - 22301074;30032202 116914372 MODEL JAAIVD010000008;XM_032918574;XM_032918575;XM_032918576 XP_032774465;XP_032774466;XP_032774467 F-box only protein 25 protein-coding 626097366 Rad17 RAD17 checkpoint clamp loader component ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); INVOLVED IN DNA damage response (ortholog); mitotic intra-S DNA damage checkpoint signaling (ortholog); negative regulation of DNA replication (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 3 158003258 158034821 - 22301074;30032202 116897096 MODEL JAAIVD010000012;XM_032898737 XP_032754628 cell cycle checkpoint protein RAD17 protein-coding 626097387 LOC116910752 U2 spliceosomal RNA 9 62874411 62874514 + 116910752 MODEL JAAIVD010000002 pseudo 626097388 Ranbp1 RAN binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); INVOLVED IN cellular response to leptomycin B (ortholog); cellular response to xenobiotic stimulus (ortholog); positive regulation of mitotic centrosome separation (ortholog); PARTICIPATES IN CRM1 export pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); human immunodeficiency virus infectious disease (ortholog); Kidney Neoplasms (ortholog); FOUND IN axon cytoplasm (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 3508329 3516458 - 22301074;30032202 116898666 MODEL JAAIVD010000003;XM_032899904 XP_032755795 ran-specific GTPase-activating protein protein-coding 626097398 Rgs12 regulator of G protein signaling 12 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); GTPase activator activity (ortholog); GTPase regulator activity (ortholog); INVOLVED IN negative regulation of G protein-coupled receptor signaling pathway (ortholog); termination of G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; G protein mediated signaling pathway via Galpha12/Galpha13 family; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 70045060 70137574 - 22301074;30032202 116912291 MODEL JAAIVD010000006;XM_032916291;XM_032916292;XM_032916293;XM_032916294 XP_032772182;XP_032772183;XP_032772184;XP_032772185 regulator of G-protein signaling 12 protein-coding 626097429 LOC116914137 small nucleolar RNA SNORA17 12 30168203 30168334 + 116914137 MODEL JAAIVD010000007;XR_004389698 snorna 626097432 Ano8 anoctamin 8 ENCODES a protein that exhibits intracellularly calcium-gated chloride channel activity (ortholog); INVOLVED IN chloride transmembrane transport (ortholog); FOUND IN plasma membrane (ortholog) 13 13501369 13510781 + 30032202 116915095 MODEL JAAIVD010000008;XM_032919522 XP_032775413 anoctamin-8 protein-coding 626097453 LOC116907343 60S ribosomal protein L14-like 8 33062348 33063124 - 116907343 MODEL JAAIVD010000027 pseudo 626097454 LOC116896021 glyceraldehyde-3-phosphate dehydrogenase-like 3 180664493 180666757 + 116896021 MODEL JAAIVD010000012 pseudo 626097455 LOC116883569 histone H2B type 1-C/E/F/G/I 14 42606865 42607330 - 22301074;30032202 116883569 MODEL JAAIVD010000009;XM_032884751 XP_032740642 protein-coding 626097460 LOC116914326 ubiquitin-40S ribosomal protein S27a-like 13 44954507 44954987 - 116914326 MODEL JAAIVD010000008 pseudo 626097461 Tmem45a transmembrane protein 45A ASSOCIATED WITH COVID-19 (ortholog); Lung Neoplasms (ortholog) 4 40897600 40990717 - 116897918 MODEL JAAIVD010000003;XM_032899317 XP_032755208 protein-coding 626097471 Scrn1 secernin 1 INVOLVED IN regulation of synaptic vesicle cycle (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); prostate cancer (ortholog); Stomach Neoplasms (ortholog); FOUND IN nuclear membrane (ortholog); nucleus (ortholog); presynapse (ortholog) 6 86510590 86573766 + 22301074;30032202 116903772 MODEL JAAIVD010000024;XM_032906461;XM_032906462 XP_032762352;XP_032762353 secernin-1 protein-coding 626097486 LOC116895723 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4 3 222963431 222964837 + 22301074;30032202 116895723 MODEL JAAIVD010000012;XM_032896906 XP_032752797 protein-coding 626097490 Fam187b family with sequence similarity 187 member B 2 165048051 165062735 - 116894448 MODEL JAAIVD010000001;XM_032896152;XM_032896153 XP_032752043;XP_032752044 protein FAM187B protein-coding 626097498 LOC116900439 olfactory receptor 4C15-like 5 70794727 70795662 - 22301074 116900439 MODEL JAAIVD010000023;XM_032902180 XP_032758071 protein-coding 626097501 Sox14 SRY-box transcription factor 14 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN entrainment of circadian clock (ortholog); regulation of neuron migration (ortholog); visual perception (ortholog); ASSOCIATED WITH syndromic microphthalmia 5 (ortholog); FOUND IN transcription regulator complex (ortholog) 8 91200695 91202811 - 30032202 116908254 MODEL JAAIVD010000027;XM_032911508 XP_032767399 transcription factor SOX-14 protein-coding 626097505 Aup1 AUP1 lipid droplet regulating VLDL assembly factor ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); lipid droplet formation (ortholog); lipid droplet organization (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 63167412 63170457 - 22301074;30032202 116903635 MODEL JAAIVD010000024;XM_032906298;XM_032906299;XM_032906300 XP_032762189;XP_032762190;XP_032762191 ancient ubiquitous protein 1 protein-coding 626097527 LOC116894261 olfactory receptor 5V1-like 2 115566198 115567145 - 22301074 116894261 MODEL JAAIVD010000001;XM_032895965 XP_032751856 protein-coding 626097530 LOC116892999 retinoic acid early-inducible protein 1-alpha-like 2 221881317 221885551 + 30032202 116892999 MODEL JAAIVD010000001;XM_032894961 XP_032750852 protein-coding 626097539 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 5 100485468 100485539 + 116902677 MODEL JAAIVD010000023 trna 626097540 LOC116893740 transcription factor BTF3 homolog 4-like 2 20122943 20123433 + 116893740 MODEL JAAIVD010000001 pseudo 626097541 LOC116905498 cytochrome c oxidase assembly factor 8 INVOLVED IN intrinsic apoptotic signaling pathway (ortholog); mitochondrial cytochrome c oxidase assembly (ortholog); positive regulation of cytochrome-c oxidase activity (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); mitochondrial complex IV deficiency nuclear type 1 (ortholog); FOUND IN matrix side of mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 7 129308177 129333964 + 22301074;30032202 116905498 MODEL JAAIVD010000026;XM_032908506 XP_032764397 protein-coding 626097550 LOC116903840 amiloride-sensitive amine oxidase [copper-containing]-like 6 92055315 92058942 - 22301074;30032202 116903840 MODEL JAAIVD010000024;XM_032906556 XP_032762447 protein-coding 626097558 Ctbs chitobiase ENCODES a protein that exhibits chitinase activity (ortholog); INVOLVED IN chitin catabolic process (ortholog); oligosaccharide catabolic process (ortholog) 3 14450497 14465763 - 22301074;30032202 116896171 MODEL JAAIVD010000012;XM_032897205 XP_032753096 di-N-acetylchitobiase protein-coding 626097569 Pdgfd platelet derived growth factor D INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Bone Metastasis (ortholog); Cardiac Allograft Vasculopathy (ortholog); FOUND IN extracellular space (ortholog) 8 2836918 3046425 + 22301074;30032202 116907884 MODEL JAAIVD010000027;XM_032911072 XP_032766963 platelet-derived growth factor D protein-coding 626097580 Sohlh2 spermatogenesis and oogenesis specific basic helix-loop-helix 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell differentiation (ortholog); oocyte differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 3 99231801 99253652 - 22301074;30032202 116895487 MODEL JAAIVD010000012;XM_032896746 XP_032752637 spermatogenesis- and oogenesis-specific basic helix-loop-helix-containing protein 2 protein-coding 626097595 LOC116909384 40S ribosomal protein S10-like 9 7569037 7569636 - 116909384 MODEL JAAIVD010000002;XR_004389069 pseudo 626097598 Tpmt thiopurine S-methyltransferase ENCODES a protein that exhibits S-adenosyl-L-methionine binding (ortholog); thiopurine S-methyltransferase activity (ortholog); INVOLVED IN response to testosterone (ortholog); xenobiotic metabolic process (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); alopecia (ortholog); autism spectrum disorder (ortholog) 14 66018278 66036277 - 22301074;30032202 116883628 MODEL JAAIVD010000009;XM_032884817 XP_032740708 protein-coding 626097611 Shox2 SHOX homeobox 2 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN cardiac atrium morphogenesis (ortholog); cardiac pacemaker cell differentiation (ortholog); cardiac right atrium morphogenesis (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cleft palate (ortholog); Leri-Weill dyschondrosteosis (ortholog) 3 88245486 88255384 + 22301074;30032202 116896806 MODEL JAAIVD010000012;XM_032898279;XM_032898280;XM_032898281 XP_032754170;XP_032754171;XP_032754172 short stature homeobox 2;short stature homeobox protein 2 protein-coding 626097624 LOC116889888 vomeronasal type-2 receptor 116-like 1 158432728 158457388 - 22301074;30032202 116889888 MODEL JAAIVD010000025;XM_032890709;XM_032890710;XM_032890711 XP_032746600;XP_032746601;XP_032746602 protein-coding 626097637 Naf1 nuclear assembly factor 1 ribonucleoprotein ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN positive regulation of telomere maintenance via telomerase (ortholog); positive regulation of telomere maintenance via telomere lengthening (ortholog); ribosome biogenesis (ortholog); ASSOCIATED WITH melanoma (ortholog); pulmonary fibrosis (ortholog); Pulmonary Fibrosis and/or Bone Marrow Failure Syndrome, Telomere-Related, 7 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 22410509 22441266 - 22301074;30032202 116914466 MODEL JAAIVD010000008;XM_032918767 XP_032774658 H/ACA ribonucleoprotein complex non-core subunit NAF1 protein-coding 626097649 LOC116909250 lysozyme C-1 1 195414723 195420274 - 22301074;30032202 116909250 MODEL JAAIVD010000025;XM_032912775 XP_032768666 protein-coding 626097657 LOC116897602 U1 spliceosomal RNA 3 60911300 60911463 - 116897602 MODEL JAAIVD010000012;XR_004387598 snrna 626097660 LOC116890117 glyceraldehyde-3-phosphate dehydrogenase-like 1 237990374 237991378 + 116890117 MODEL JAAIVD010000025 pseudo 626097661 Grpr gastrin releasing peptide receptor ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); learning or memory (ortholog); motor behavior (ortholog); ASSOCIATED WITH Memory Disorders (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) X 24107436 24151898 - 22301074;30032202 116889180 MODEL JAAIVD010000014;XM_032890343 XP_032746234 gastrin-releasing peptide receptor protein-coding 626097668 Cthrc1 collagen triple helix repeat containing 1 ENCODES a protein that exhibits frizzled binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN cell migration (ortholog); cochlea morphogenesis (ortholog); establishment of planar polarity involved in neural tube closure (ortholog); PARTICIPATES IN Wnt signaling, non-canonical pathway; ASSOCIATED WITH Barrett's esophagus (ortholog); FOUND IN extracellular matrix (ortholog); extracellular space (ortholog); sarcoplasm (ortholog) 1 212092701 212103049 - 116890060 MODEL JAAIVD010000025;XM_032890827 XP_032746718 collagen triple helix repeat-containing protein 1 protein-coding 626097676 Man2a2 mannosidase alpha class 2A member 2 ENCODES a protein that exhibits hydrolase activity, hydrolyzing N-glycosyl compounds (ortholog); mannosidase activity (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog) 2 119878898 119899296 + 22301074;30032202 116891918 MODEL JAAIVD010000001;XM_032893342;XM_032893343 XP_032749233;XP_032749234 alpha-mannosidase 2x protein-coding 626097706 Polr2f RNA polymerase II, I and III subunit F INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 51538870 51539154 + 22301074 116910317 MODEL JAAIVD010000002;XM_032914180 XP_032770071 DNA-directed RNA polymerases I, II, and III subunit RPABC2;RNA polymerase II subunit F protein-coding 626097709 LOC116913274 40S ribosomal protein S7-like 12 85484782 85485368 - 116913274 MODEL JAAIVD010000007 pseudo 626097710 LOC116900133 olfactory receptor 1N1 5 14548854 14549789 - 22301074 116900133 MODEL JAAIVD010000023;XM_032901906 XP_032757797 protein-coding 626097713 LOC116892339 zinc finger protein 790-like 2 166187429 166196480 + 30032202 116892339 MODEL JAAIVD010000001;XM_032893979 XP_032749870 protein-coding 626097721 LOC116889694 DNA gyrase subunit A-like 22301074;30032202 116889694 MODEL JAAIVD010000052;XM_032890581 XP_032746472 protein-coding 626097722 LOC116883583 histone H4 14 42699308 42699771 - 22301074;30032202 116883583 MODEL JAAIVD010000009;XM_032884763 XP_032740654 protein-coding 626097727 Sv2c synaptic vesicle glycoprotein 2C INVOLVED IN negative regulation of excitatory postsynaptic potential (ortholog); regulation of synaptic vesicle exocytosis (ortholog); ASSOCIATED WITH spinal muscular atrophy (ortholog); FOUND IN dopaminergic synapse (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 3 200443211 200572834 + 22301074 116897277 MODEL JAAIVD010000012;XM_032899010 XP_032754901 protein-coding 626097743 Ipo4 importin 4 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); protein localization to nucleus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromatin (ortholog); protein-containing complex (ortholog) 12 69370921 69380463 + 22301074;30032202 116913149 MODEL JAAIVD010000007;XM_032917361 XP_032773252 importin-4 protein-coding 626097776 Gstz1 glutathione S-transferase zeta 1 ENCODES a protein that exhibits glutathione transferase activity (ortholog); identical protein binding (ortholog); maleylacetoacetate isomerase activity (ortholog); INVOLVED IN cellular detoxification (ortholog); glutathione metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); Maleylacetoacetate Isomerase Deficiency (ortholog); urinary bladder cancer (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 7 101248687 101259259 + 22301074;30032202 116905317 MODEL JAAIVD010000026;XM_032908206;XM_032908208 XP_032764097;XP_032764099 maleylacetoacetate isomerase protein-coding 626097794 LOC116908207 40S ribosomal protein S7-like 8 67113619 67151804 - 116908207 MODEL JAAIVD010000027 pseudo 626097795 Ctr9 CTR9 component of Paf1/RNA polymerase II complex ENCODES a protein that exhibits SH2 domain binding (ortholog); INVOLVED IN blastocyst growth (ortholog); blastocyst hatching (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary Wilms' tumor (ortholog); Hypertelorism (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); euchromatin (ortholog); nucleoplasm (ortholog) 2 90397902 90428638 - 30032202 116891654 MODEL JAAIVD010000001;XM_032892899 XP_032748790 CTR9 homolog, Paf1/RNA polymerase II complex component;RNA polymerase-associated protein CTR9 homolog protein-coding 626097824 LOC116899367 uncharacterized LOC116899367 4 122417407 122422306 - 116899367 MODEL JAAIVD010000003;XR_004387721 ncrna 626097828 Nuak1 NUAK family kinase 1 ENCODES a protein that exhibits p53 binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); regulation of cell adhesion (ortholog); regulation of cellular senescence (ortholog); ASSOCIATED WITH COVID-19 (ortholog); multiple myeloma (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN cytoplasm (ortholog); fibrillar center (ortholog); microtubule cytoskeleton (ortholog) 1 164003172 164073064 + 22301074;30032202 116907490 MODEL JAAIVD010000025;XM_032910486 XP_032766377 NUAK family SNF1-like kinase 1 protein-coding 626097839 LOC116891809 olfactory receptor 51F2-like 2 102697457 102698401 - 22301074 116891809 MODEL JAAIVD010000001;XM_032893166 XP_032749057 protein-coding 626097842 LOC116910994 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 10 4376819 4382644 + 116910994 MODEL JAAIVD010000005 pseudo 626097843 Txnrd2 thioredoxin reductase 2 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); heart development (ortholog); hemopoiesis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) 4 3690154 3737341 + 22301074;30032202 116898672 MODEL JAAIVD010000003;XM_032899921 XP_032755812 thioredoxin reductase 2, mitochondrial protein-coding 626097865 LOC116895628 mitochondrial fission process protein 1-like 3 173800953 173804838 - 116895628 MODEL JAAIVD010000012 pseudo 626097866 LOC116902664 U6 spliceosomal RNA 5 73077307 73077413 + 116902664 MODEL JAAIVD010000023;XR_004388226 snrna 626097869 LOC116883472 cathepsin R-like 14 77076642 77083287 + 30032202 116883472 MODEL JAAIVD010000009;XM_032884624;XM_032884626 XP_032740515;XP_032740517 protein-coding 626097884 LOC116899897 small nucleolar RNA SNORA17 4 9668640 9668770 + 116899897 MODEL JAAIVD010000003;XR_004387873 snorna 626097887 Neo1 neogenin 1 ENCODES a protein that exhibits BMP receptor binding (ortholog); cadherin binding (ortholog); co-receptor binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); myoblast fusion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Optic Nerve Injuries (ortholog); Penetrating Eye Injuries (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 8 52735805 52888883 - 22301074;30032202 116906635 MODEL JAAIVD010000027;XM_032909397;XM_032909398;XM_032909399;XM_032909400;XM_032909401;XM_032909402;XM_032909403;XM_032909404;XM_032909405;XM_032909407 XP_032765288;XP_032765289;XP_032765290;XP_032765291;XP_032765292;XP_032765293;XP_032765294;XP_032765295;XP_032765296;XP_032765298 neogenin protein-coding 626097939 Tspan4 tetraspanin 4 ENCODES a protein that exhibits antigen binding (ortholog); integrin binding (ortholog); INVOLVED IN mitocytosis (ortholog); protein-containing complex assembly (ortholog); regulation of mitochondrial membrane potential (ortholog); FOUND IN migrasome (ortholog); plasma membrane (ortholog); vesicle (ortholog) 2 7993225 8011667 - 22301074;30032202 116890860 MODEL JAAIVD010000001;XM_032891426;XM_032891427;XM_032891428;XR_004386790 XP_032747317;XP_032747318;XP_032747319 tetraspanin-4 protein-coding 626097961 Hoxa7 homeobox A7 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); anterior/posterior pattern specification (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 88843868 88847039 + 22301074;30032202 116903808 MODEL JAAIVD010000024;XM_032906509;XM_032906510;XM_032906511;XM_032906512;XM_032906513 XP_032762400;XP_032762401;XP_032762402;XP_032762403;XP_032762404 homeobox protein Hox-A7 protein-coding 626097983 LOC116893059 non-histone chromosomal protein HMG-14-like 2 33889047 33896243 - 22301074 116893059 MODEL JAAIVD010000001;XM_032895021 XP_032750912 protein-coding 626097988 Ankrd9 ankyrin repeat domain 9 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN intracellular copper ion homeostasis (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 7 128549903 128552536 - 22301074 116905484 MODEL JAAIVD010000026;XM_032908481 XP_032764372 ankyrin repeat domain-containing protein 9 protein-coding 626097994 LOC116895791 60S ribosomal protein L37a-like 3 59145729 59151842 - 22301074 116895791 MODEL JAAIVD010000012;XM_032896934 XP_032752825 protein-coding 626097999 LOC116896018 dnaJ homolog subfamily A member 1-like 3 178680413 178685767 + 116896018 MODEL JAAIVD010000012 pseudo 626098000 Irf2 interferon regulatory factor 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); nucleoplasm (ortholog) 13 41070607 41125332 + 30032202 116914451 MODEL AB003091;JAAIVD010000008;XM_032918753 BAA19746;XP_032774644 IRF-2 protein-coding 626098013 Chn2 chimerin 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN acrosome assembly (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); schizophrenia (ortholog); FOUND IN synapse (ortholog) 6 86785958 87046537 - 22301074;30032202 116903776 MODEL JAAIVD010000024;XM_032906467 XP_032762358 beta-chimaerin protein-coding 626098030 LOC116913189 40S ribosomal protein S9-like 12 64758298 64758935 + 30032202 116913189 MODEL JAAIVD010000007;XM_032917383 XP_032773274 protein-coding 626098034 LOC116906415 small nucleolar RNA SNORD53/SNORD92 7 21574047 21574122 - 116906415 MODEL JAAIVD010000026;XR_004388677 snorna 626098037 LOC116895096 small nucleolar RNA U13 2 121219632 121219734 + 116895096 MODEL JAAIVD010000001;XR_004387259 snorna 626098040 LOC116905603 uncharacterized LOC116905603 7 28818920 28819455 - 116905603 MODEL JAAIVD010000026;XR_004388555 ncrna 626098044 Nrsn1 neurensin 1 INVOLVED IN nervous system development (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); growth cone (ortholog); neuron projection (ortholog) 14 44264005 44282080 - 30032202 116883699 MODEL JAAIVD010000009;XM_032884913 XP_032740804 neurensin-1 protein-coding 626098052 Npb neuropeptide B ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 9 63413532 63414318 - 22301074;30032202 116909366 MODEL JAAIVD010000002;XM_032912912;XM_032912913;XM_032912914 XP_032768803;XP_032768804;XP_032768805 protein-coding 626098065 Cd82 CD82 molecule ASSOCIATED WITH breast carcinoma (ortholog); cervical squamous cell carcinoma (ortholog); endometrial carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 5 67590431 67634184 - 22301074;30032202 116901652 MODEL JAAIVD010000023;XM_032903761;XM_032903762 XP_032759652;XP_032759653 CD82 antigen protein-coding 626098081 Scrn2 secernin 2 9 57353007 57356983 - 22301074;30032202 116910045 MODEL JAAIVD010000002;XM_032913834;XM_032913835 XP_032769725;XP_032769726 secernin-2 protein-coding 626098096 Gla galactosidase alpha ENCODES a protein that exhibits alpha-galactosidase activity (ortholog); catalytic activity (ortholog); galactoside binding (ortholog); INVOLVED IN aorta development (ortholog); glycosphingolipid catabolic process (ortholog); glycosylceramide catabolic process (ortholog); PARTICIPATES IN Fabry disease pathway; galactose metabolic pathway; galactosemia pathway; ASSOCIATED WITH angiokeratoma (ortholog); cardiomyopathy (ortholog); Fabry disease (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) X 86893958 86905567 - 30032202 116888725 MODEL JAAIVD010000014;XM_032890016 XP_032745907 alpha-galactosidase A protein-coding 626098107 Vcpkmt valosin containing protein lysine methyltransferase ENCODES a protein that exhibits ATPase binding (ortholog); protein methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN negative regulation of ATP-dependent activity (ortholog); peptidyl-lysine methylation (ortholog); peptidyl-lysine trimethylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); protein-containing complex (ortholog) 7 83223317 83228886 - 30032202 116906118 MODEL JAAIVD010000026;XM_032909117 XP_032765008 protein-lysine methyltransferase METTL21D protein-coding 626098117 Uts2 urotensin 2 INVOLVED IN blood vessel diameter maintenance (ortholog); negative regulation of blood pressure (ortholog); negative regulation of glomerular filtration (ortholog); ASSOCIATED WITH asthma (ortholog); Bradycardia (ortholog); cardiomyopathy (ortholog); FOUND IN extracellular space (ortholog) 1 9768059 9773644 - 22301074;30032202 116886128 MODEL JAAIVD010000025;XM_032887472 XP_032743363 urotensin-2 protein-coding 626098125 LOC116899860 small nucleolar RNA SNORA17 4 16895219 16895348 + 116899860 MODEL JAAIVD010000003;XR_004387855 snorna 626098128 Nhlrc1 NHL repeat containing E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN autophagy (ortholog); glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Lafora disease (ortholog); Myoclonic Epilepsy of Lafora 1 (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 14 66005810 66007180 - 22301074;30032202 116883821 MODEL JAAIVD010000009;XM_032885076 XP_032740967 E3 ubiquitin-protein ligase NHLRC1 protein-coding 626098133 LOC116897400 U6 spliceosomal RNA 3 60935933 60936039 - 116897400 MODEL JAAIVD010000012;XR_004387443 snrna 626098136 Foxj3 forkhead box J3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog) 1 37346975 37430506 - 30032202 116897399 MODEL JAAIVD010000025;XM_032899131;XM_032899132;XM_032899133;XM_032899134 XP_032755022;XP_032755023;XP_032755024;XP_032755025 forkhead box protein J3 protein-coding 626098159 Mtrr 5-methyltetrahydrofolate-homocysteine methyltransferase reductase ENCODES a protein that exhibits [methionine synthase] reductase (NADPH) activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cobalamin metabolic process (ortholog); folic acid metabolic process (ortholog); homocysteine catabolic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytosol (ortholog); intermediate filament cytoskeleton (ortholog); nucleoplasm (ortholog) 2 199869059 199901842 - 22301074;30032202 116892901 MODEL JAAIVD010000001;XM_032894820 XP_032750711 methionine synthase reductase protein-coding 626098178 LOC116910381 schlafen family member 12-like 9 87418370 87419611 - 116910381 MODEL JAAIVD010000002 pseudo 626098179 LOC116888170 synaptonemal complex protein 3-like X 116951505 116961037 + 30032202 116888170 MODEL JAAIVD010000014;XM_032889492 XP_032745383 protein-coding 626098191 LOC116887450 uncharacterized LOC116887450 18 8574832 8576824 - 116887450 MODEL JAAIVD010000013;XR_004386217 ncrna 626098195 LOC116913949 cathepsin G-like 12 68903842 68906455 + 22301074;30032202 116913949 MODEL JAAIVD010000007;XM_032918214 XP_032774105 protein-coding 626098204 LOC116914165 U4 spliceosomal RNA 12 4693850 4693918 - 116914165 MODEL JAAIVD010000007 pseudo 626098205 Fahd1 fumarylacetoacetate hydrolase domain containing 1 ENCODES a protein that exhibits acetylpyruvate hydrolase activity (ortholog); fumarylpyruvate hydrolase activity (ortholog); oxaloacetate decarboxylase activity (ortholog); INVOLVED IN oxaloacetate metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 9 2133225 2134719 - 30032202 116909217 MODEL JAAIVD010000002;XM_032912718 XP_032768609 acylpyruvase FAHD1, mitochondrial protein-coding 626098210 Xxylt1 xyloside xylosyltransferase 1 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); COVID-19 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 4 15869206 15999657 - 30032202 116898751 MODEL JAAIVD010000003;XM_032900069 XP_032755960 protein-coding 626098218 LOC116886652 dynein light chain Tctex-type 3-like 17 22766204 22766643 + 116886652 MODEL JAAIVD010000011 pseudo 626098219 Foxo3 forkhead box O3 ENCODES a protein that exhibits beta-catenin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN antral ovarian follicle growth (ortholog); brain morphogenesis (ortholog); cellular response to amyloid-beta (ortholog); PARTICIPATES IN insulin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 18 41869283 41958919 - 30032202 116887011 MODEL JAAIVD010000013;XM_032888496;XM_032888498 XP_032744387;XP_032744389 forkhead box protein O3 protein-coding 626098230 LOC116894377 olfactory receptor 13A1-like 2 156684260 156685210 + 22301074 116894377 MODEL JAAIVD010000001;XM_032896086 XP_032751977 protein-coding 626098234 Dtnbp1 dystrobrevin binding protein 1 INVOLVED IN actin cytoskeleton organization (ortholog); anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); ASSOCIATED WITH disease of mental health (ortholog); genetic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); BLOC-1 complex (ortholog) 14 63913600 64105232 - 22301074;30032202 116883244 MODEL JAAIVD010000009;XM_032884248 XP_032740139 dysbindin protein-coding 626098248 LOC116889453 U6 spliceosomal RNA X 78394757 78394860 + 116889453 MODEL JAAIVD010000014;XR_004386411 snrna 626098251 Sertm2 serine rich and transmembrane domain containing 2 X 96134787 96135056 + 30032202 116888243 MODEL JAAIVD010000014;XM_032889530 XP_032745421 serine-rich and transmembrane domain-containing 2 protein-coding 626098254 LOC116908218 40S ribosomal protein S3a-like 8 73834239 73834894 + 116908218 MODEL JAAIVD010000027 pseudo 626098255 Nsun4 NOP2/Sun RNA methyltransferase 4 ENCODES a protein that exhibits mRNA (cytidine-5-)-methyltransferase activity (ortholog); RNA methyltransferase activity (ortholog); rRNA (cytosine-C5-)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA catabolic process (ortholog); mitochondrial RNA modification (ortholog); rRNA methylation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 39713839 39734333 - 22301074;30032202 116898200 MODEL JAAIVD010000025;XM_032899563 XP_032755454 5-methylcytosine rRNA methyltransferase NSUN4 protein-coding 626098265 C9H17orf107 chromosome 9 C17orf107 homolog 9 50230483 50231563 + 116910539 MODEL JAAIVD010000002;XM_032914446 XP_032770337 uncharacterized protein C17orf107 homolog protein-coding 626098273 LOC116903200 C-type lectin domain family 2 member D2-like 6 18745135 18755606 - 30032202 116903200 MODEL JAAIVD010000024;XM_032905577 XP_032761468 protein-coding 626098280 LOC116901658 60S ribosomal protein L13-like 1 124009737 124013966 - 116901658 MODEL JAAIVD010000025 pseudo 626098281 LOC116914914 ferritin light chain 1-like 13 30766165 30772511 + 116914914 MODEL JAAIVD010000008 pseudo 626098282 LOC116885362 40S ribosomal protein S26-like 1 40409927 40410235 - 22301074;30032202 116885362 MODEL JAAIVD010000025;XM_032886639 XP_032742530 protein-coding 626098285 LOC116893207 40S ribosomal protein S3a-like 2 108494890 108495396 + 116893207 MODEL JAAIVD010000001 pseudo 626098286 LOC116912780 ankyrin repeat domain-containing protein 26-like 11 74538103 74642104 + 22301074 116912780 MODEL JAAIVD010000006;XM_032916942 XP_032772833 protein-coding 626098316 Tspo translocator protein ENCODES a protein that exhibits androgen binding (ortholog); benzodiazepine receptor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN adrenal gland development (ortholog); behavioral response to pain (ortholog); cellular hypotonic response (ortholog); PARTICIPATES IN heme biosynthetic pathway; ASSOCIATED WITH cholesterol ester storage disease (ortholog); COVID-19 (ortholog); End Stage Liver Disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 252982886 252993101 + 22301074;30032202 116890163 MODEL JAAIVD010000025;XM_032890898 XP_032746789 protein-coding 626098324 Znf236 zinc finger protein 236 INVOLVED IN cellular response to glucose stimulus (ortholog) 15 49630245 49725583 + 30032202 116885017 MODEL JAAIVD010000010;XM_032886257 XP_032742148 protein-coding 626098359 Vat1l vesicle amine transport 1 like 17 33856470 34016627 + 22301074 116886185 MODEL JAAIVD010000011;XM_032887555 XP_032743446 synaptic vesicle membrane protein VAT-1 homolog-like protein-coding 626098372 Hrh2 histamine receptor H2 ENCODES a protein that exhibits heterocyclic compound binding (ortholog); histamine receptor activity (ortholog); INVOLVED IN cellular response to histamine (ortholog); digestive tract development (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; cimetidine pharmacokinetics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); congestive heart failure (ortholog); coronary stenosis (ortholog) 14 72576309 72593723 + 22301074;30032202 116883850 MODEL JAAIVD010000009;XM_032885114 XP_032741005 histamine H2 receptor protein-coding 626098379 Tmem14a transmembrane protein 14A INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of mitochondrial outer membrane permeabilization involved in apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrial membrane (ortholog) 4 98586043 98596611 + 30032202 116899247 MODEL JAAIVD010000003;XM_032900854 XP_032756745 protein-coding 626098387 Trmt112 tRNA methyltransferase activator subunit 11-2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein methyltransferase activity (ortholog); tRNA methyltransferase activator activity (ortholog); INVOLVED IN peptidyl-glutamine methylation (ortholog); positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); FOUND IN nucleoplasm (ortholog); perinuclear region of cytoplasm (ortholog); protein-containing complex (ortholog) 2 882721 884010 - 30032202 116894821 MODEL JAAIVD010000001;XM_032896494 XP_032752385 multifunctional methyltransferase subunit TRM112-like protein;tRNA methyltransferase subunit 11-2 protein-coding 626098395 Pnn pinin, desmosome associated protein INVOLVED IN cell-cell adhesion (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasm (ortholog); desmosome (ortholog) 7 72357149 72365950 + 30032202 116905083 MODEL JAAIVD010000026;XM_032907790 XP_032763681 pinin protein-coding 626098408 LOC116884070 small nucleolar RNA SNORA48 14 24496442 24496579 + 116884070 MODEL JAAIVD010000009;XR_004385818 snorna 626098411 Gabrg2 gamma-aminobutyric acid type A receptor subunit gamma2 ENCODES a protein that exhibits chloride channel activity (ortholog); GABA receptor activity (ortholog); GABA-A receptor activity (ortholog); INVOLVED IN adult behavior (ortholog); cellular response to histamine (ortholog); cellular response to zinc ion (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite membrane (ortholog) 9 24779273 24866208 - 22301074;30032202 116910449 MODEL JAAIVD010000002;XM_032914301;XM_032914302 XP_032770192;XP_032770193 gamma-aminobutyric acid receptor subunit gamma-2 protein-coding 626098428 LOC116913043 U6 spliceosomal RNA 11 21782252 21782358 - 116913043 MODEL JAAIVD010000006;XR_004389579 snrna 626098431 Grm3 glutamate metabotropic receptor 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cellular response to stress (ortholog); G protein-coupled glutamate receptor signaling pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); schizophrenia (ortholog); temporal lobe epilepsy (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); dendritic spine (ortholog) 6 141280164 141516896 - 22301074;30032202 116904150 MODEL JAAIVD010000024;XM_032907047;XM_032907048;XM_032907049 XP_032762938;XP_032762939;XP_032762940 metabotropic glutamate receptor 3 protein-coding 626098448 LOC116894853 U6 spliceosomal RNA 2 37961882 37961988 + 116894853 MODEL JAAIVD010000001;XR_004387068 snrna 626098451 LOC116885923 40S ribosomal protein S29-like 16 10311580 10312127 - 116885923 MODEL JAAIVD010000004 pseudo 626098452 LOC116905801 dnaJ homolog subfamily C member 17-like 7 94566567 94567478 - 22301074;30032202 116905801 MODEL JAAIVD010000026;XM_032908775 XP_032764666 protein-coding 626098455 Thumpd1 THUMP domain 1 NAT10 acetyltransferase adaptor ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH SPEECH DELAY AND VARIABLE OCULAR ANOMALIES (ortholog) 2 81944544 81950629 + 22301074;30032202 116891598 MODEL JAAIVD010000001;XM_032892790 XP_032748681 THUMP domain containing 1;THUMP domain-containing protein 1 protein-coding 626098463 LOC116888335 selection and upkeep of intraepithelial T-cells protein 6-like 1 86994849 87005914 + 116888335 MODEL JAAIVD010000025;XM_032889609 XP_032745500 protein-coding 626098471 LOC116897415 U6 spliceosomal RNA 3 150833701 150833805 - 116897415 MODEL JAAIVD010000012;XR_004387457 snrna 626098474 LOC116897869 cystatin-A-like 4 21205814 21216150 + 22301074;30032202 116897869 MODEL JAAIVD010000003;XM_032899277 XP_032755168 protein-coding 626098479 Lyl1 LYL1 basic helix-loop-helix family member ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); blood vessel maturation (ortholog); definitive hemopoiesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); lymphoid leukemia (ortholog); myelodysplastic syndrome (ortholog) 17 15588731 15592107 - 22301074;30032202 116886300 MODEL JAAIVD010000011;XM_032887741 XP_032743632 protein lyl-1 protein-coding 626098487 Pcbp4 poly(rC) binding protein 4 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); PARTICIPATES IN iron homeostasis pathway; FOUND IN cytosol (ortholog) 8 97753084 97763391 + 30032202 116907485 MODEL JAAIVD010000027;XM_032910473;XM_032910475;XM_032910476 XP_032766364;XP_032766366;XP_032766367 poly(rC)-binding protein 4 protein-coding 626098513 LOC116912550 F-box only protein 48-like 11 85380962 85383241 + 22301074;30032202 116912550 MODEL JAAIVD010000006;XM_032916650 XP_032772541 protein-coding 626098519 Gcnt3 glucosaminyl (N-acetyl) transferase 3, mucin type ENCODES a protein that exhibits acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); N-acetyllactosaminide beta-1,6-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN intestinal absorption (ortholog); kidney morphogenesis (ortholog); tissue morphogenesis (ortholog) 8 64381807 64392101 - 22301074;30032202 116907412 MODEL JAAIVD010000027;XM_032910369;XM_032910370;XM_032910371;XM_032910372 XP_032766260;XP_032766261;XP_032766262;XP_032766263 beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 3 protein-coding 626098536 LOC116886629 40S ribosomal protein S2-like 17 16665188 16667109 - 116886629 MODEL JAAIVD010000011 pseudo 626098537 LOC116888927 riboflavin kinase-like X 102776980 102778680 + 116888927 MODEL JAAIVD010000014 pseudo 626098538 LOC116903387 tubulin alpha-1B chain-like 6 31508660 31512476 - 116903387 MODEL JAAIVD010000024 pseudo 626098539 LOC116895052 5S ribosomal RNA 2 165884744 165884855 - 116895052 MODEL JAAIVD010000001 pseudo 626098540 LOC116911251 40S ribosomal protein S18-like 1 164551469 164631930 - 116911251 MODEL JAAIVD010000025 pseudo 626098541 LOC116888085 40S ribosomal protein SA-like X 93187797 93188528 + 116888085 MODEL JAAIVD010000014 pseudo 626098542 Uimc1 ubiquitin interaction motif containing 1 ENCODES a protein that exhibits histone binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); nuclear retinoid X receptor binding (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN BRCA1-A complex (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 14 73364776 73430607 - 22301074;30032202 116883313 MODEL JAAIVD010000009;XM_032884365 XP_032740256 BRCA1-A complex subunit RAP80 protein-coding 626098561 LOC116907654 glutathione S-transferase alpha-4 8 72445759 72456740 + 1599415;22301074;30032202 116907654 MODEL JAAIVD010000027;X62660;XM_032910745 CAB46530;XP_032766636 glutathione transferase protein-coding 626098571 Tmem25 transmembrane protein 25 INVOLVED IN negative regulation of excitatory postsynaptic potential (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Breast Neoplasms (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog) 8 39327595 39332193 - 30032202 116908106 MODEL JAAIVD010000027;XM_032911386;XM_032911387 XP_032767277;XP_032767278 protein-coding 626098588 Ddit4 DNA damage inducible transcript 4 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN brain development (ortholog); cellular response to dexamethasone stimulus (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); leukemia (ortholog); mouth disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 18 25781337 25783434 - 22301074;30032202 116887273 MODEL JAAIVD010000013;XM_032888843 XP_032744734 DNA damage-inducible transcript 4 protein protein-coding 626098595 LOC116913671 olfactory receptor 1537-like 12 226107 227075 - 22301074;30032202 116913671 MODEL JAAIVD010000007;XM_032917957 XP_032773848 protein-coding 626098598 LOC116893686 olfactory receptor 5B3-like 2 12695024 12695965 + 22301074;30032202 116893686 MODEL JAAIVD010000001;XM_032895402 XP_032751293 protein-coding 626098602 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 33719509 33719583 - 116884243 MODEL JAAIVD010000009 trna 626098603 LOC116904441 40S ribosomal protein S17-like 6 122253956 122254356 + 116904441 MODEL JAAIVD010000024 pseudo 626098604 LOC116907501 ribosome-recycling factor, mitochondrial-like 8 111491309 111492308 - 30032202 116907501 MODEL JAAIVD010000027;XM_032910496 XP_032766387 protein-coding 626098609 Zmat4 zinc finger matrin-type 4 ENCODES a protein that exhibits identical protein binding (ortholog) 13 62385531 62763220 - 22301074 116914401 MODEL JAAIVD010000008;XM_032918628;XM_032918629;XM_032918630;XM_032918631 XP_032774519;XP_032774520;XP_032774521;XP_032774522 zinc finger matrin-type protein 4 protein-coding 626098628 LOC116914012 uncharacterized LOC116914012 12 70047896 70049110 - 116914012 MODEL JAAIVD010000007;XR_004389650 ncrna 626098633 LOC116911107 uncharacterized LOC116911107 10 36053777 36065560 - 116911107 MODEL JAAIVD010000005;XR_004389313 ncrna 626098638 LOC116885704 elongin-C-like 16 15485990 15486280 - 22301074;30032202 116885704 MODEL JAAIVD010000004;XM_032887009 XP_032742900 protein-coding 626098641 Snap29 synaptosome associated protein 29 INVOLVED IN autophagosome maturation (ortholog); autophagosome membrane docking (ortholog); cilium assembly (ortholog); ASSOCIATED WITH CEDNIK syndrome (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN autophagosome (ortholog); centrosome (ortholog); ciliary pocket membrane (ortholog) 4 2663064 2686161 + 30032202 116898637 MODEL JAAIVD010000003;XM_032899857 XP_032755748 synaptosomal-associated protein 29 protein-coding 626098650 Rgs13 regulator of G protein signaling 13 INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); negative regulation of G protein-coupled receptor signaling pathway (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog); plasma membrane (ortholog) 10 24061055 24087528 - 116911222 MODEL JAAIVD010000005;XM_032915119 XP_032771010 regulator of G-protein signaling 13 protein-coding 626098657 Cep120 centrosomal protein 120 INVOLVED IN astral microtubule organization (ortholog); cell population proliferation (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); familial erythrocytosis 2 (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 15 78014759 78078154 + 30032202 116884289 MODEL JAAIVD010000010;XM_032885386;XM_032885387 XP_032741277;XP_032741278 centrosomal protein of 120 kDa protein-coding 626098684 LOC116911898 U7 small nuclear RNA 10 82788718 82788778 + 116911898 MODEL JAAIVD010000005;XR_004389405 snrna 626098687 Tmcc2 transmembrane and coiled-coil domain family 2 INVOLVED IN amyloid precursor protein metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 10 3452855 3489868 + 30032202 116911056 MODEL JAAIVD010000005;XM_032914809;XM_032914810 XP_032770700;XP_032770701 transmembrane and coiled-coil domains protein 2 protein-coding 626098701 Ttll1 TTL family tubulin polyglutamylase complex subunit L1 ENCODES a protein that exhibits tubulin-glutamic acid ligase activity (ortholog); INVOLVED IN axoneme assembly (ortholog); cerebellar Purkinje cell differentiation (ortholog); cilium disassembly (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); FOUND IN ciliary basal body (ortholog); microtubule (ortholog) 1 252895877 252921023 - 30032202 116914428 MODEL JAAIVD010000025;XM_032918729 XP_032774620 probable tubulin polyglutamylase TTLL1;tubulin tyrosine ligase like 1 protein-coding 626098715 LOC116914979 60S ribosomal protein L32-like 13 22480826 22481286 + 116914979 MODEL JAAIVD010000008 pseudo 626098716 Ehhadh enoyl-CoA hydratase and 3-hydroxyacyl CoA dehydrogenase ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 3-hydroxyacyl-CoA dehydratase activity (ortholog); delta(3)-delta(2)-enoyl-CoA isomerase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid beta-oxidation (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); PARTICIPATES IN valproic acid pharmacokinetics pathway; ASSOCIATED WITH cholestasis (ortholog); chronic kidney disease (ortholog); Fanconi renotubular syndrome 1 (ortholog); FOUND IN cytosol (ortholog); peroxisomal matrix (ortholog); peroxisome (ortholog) 4 6431241 6466944 - 22301074;30032202 116898710 MODEL JAAIVD010000003;XM_032900001 XP_032755892 peroxisomal bifunctional enzyme protein-coding 626098727 Chrna2 cholinergic receptor nicotinic alpha 2 subunit ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN cellular response to nicotine (ortholog); cerebral cortex GABAergic interneuron development (ortholog); hippocampus development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH autosomal dominant nocturnal frontal lobe epilepsy (ortholog); autosomal dominant nocturnal frontal lobe epilepsy 4 (ortholog); benign familial infantile epilepsy (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cell periphery (ortholog) 12 58302739 58319576 - 22301074;30032202 116913823 MODEL JAAIVD010000007;XM_032918137 XP_032774028 neuronal acetylcholine receptor subunit alpha-2 protein-coding 626098738 Adgb androglobin INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN sperm annulus (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 2 226654312 226778399 + 22301074 116893025 MODEL JAAIVD010000001;XM_032894985 XP_032750876 protein-coding 626098778 LOC116889587 uncharacterized LOC116889587 1 141352089 141355125 - 116889587 MODEL JAAIVD010000025;XR_004386500 ncrna 626098783 Clspn claspin ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); DNA secondary structure binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); DNA damage checkpoint signaling (ortholog); DNA replication checkpoint signaling (ortholog); ASSOCIATED WITH COVID-19 (ortholog); myoepithelioma (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 31705974 31740995 - 30032202 116896592 MODEL JAAIVD010000025;XM_032897837 XP_032753728 protein-coding 626098812 LOC116888436 uncharacterized LOC116888436 X 81873345 81875020 + 116888436 MODEL JAAIVD010000014 pseudo 626098813 Ctxn3 cortexin 3 15 74376596 74386627 - 116884485 MODEL JAAIVD010000010;XM_032885601;XM_032885602;XM_032885603 XP_032741492;XP_032741493;XP_032741494 cortexin-3 protein-coding 626098825 Exosc3 exosome component 3 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN CUT catabolic process (ortholog); DNA deamination (ortholog); isotype switching (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic exosome (RNase complex) (ortholog); cytosol (ortholog) 1 1194038 1199438 + 22301074;30032202 116890785 MODEL JAAIVD010000025;XM_032891258 XP_032747149 exosome complex component RRP40 protein-coding 626098833 Kif17 kinesin family member 17 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN anterograde dendritic transport of neurotransmitter receptor complex (ortholog); microtubule-based process (ortholog); protein-containing complex localization (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 1 19918226 19954881 - 22301074;30032202 116893895 MODEL JAAIVD010000025;XM_032895618;XM_032895625;XM_032895633;XM_032895637 XP_032751509;XP_032751516;XP_032751524;XP_032751528 kinesin-like protein KIF17 protein-coding 626098859 Fcho1 FCH and mu domain containing endocytic adaptor 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); INVOLVED IN clathrin coat assembly (ortholog); clathrin-dependent endocytosis (ortholog); positive regulation of T cell activation (ortholog); ASSOCIATED WITH Immunodeficiency 76 (ortholog); pneumoconiosis (ortholog); severe congenital neutropenia (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cytosol (ortholog) 13 13245118 13263135 + 30032202 116914267 MODEL JAAIVD010000008;XM_032918487;XM_032918488;XM_032918489 XP_032774378;XP_032774379;XP_032774380 F-BAR domain only protein 1 protein-coding 626098896 Tead1 TEA domain transcription factor 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); heart development (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); metabolic dysfunction and alcohol associated liver disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); TEAD-YAP complex (ortholog) 2 88615987 88824824 - 22301074;30032202 116891644 MODEL JAAIVD010000001;XM_032892873;XM_032892874;XM_032892875;XM_032892876;XM_032892877 XP_032748764;XP_032748765;XP_032748766;XP_032748767;XP_032748768 transcriptional enhancer factor TEF-1 protein-coding 626098922 LOC116886006 5S ribosomal RNA 16 18817941 18818056 + 116886006 MODEL JAAIVD010000004 pseudo 626098923 LOC116903220 sentrin-specific protease 2-like 6 19514884 19516311 - 116903220 MODEL JAAIVD010000024 pseudo 626098924 Hells helicase, lymphoid specific ENCODES a protein that exhibits ATP-dependent chromatin remodeler activity (ortholog); chromatin binding (ortholog); chromatin-protein adaptor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); chromatin remodeling (ortholog); chromosomal DNA methylation maintenance following DNA replication (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN chromosome, centromeric region (ortholog); nucleus (ortholog); pericentric heterochromatin (ortholog) 2 34811112 34852777 - 22301074;30032202 116891114 MODEL JAAIVD010000001;XM_032891830 XP_032747721 lymphoid-specific helicase protein-coding 626098950 Wscd2 WSC domain containing 2 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN Golgi membrane (ortholog) 16 40387204 40480842 - 116885402 MODEL JAAIVD010000004;XM_032886685 XP_032742576 WSC domain-containing protein 2 protein-coding 626098963 LOC116901530 40S ribosomal protein S11-like 1 31307343 31308001 - 116901530 MODEL JAAIVD010000025 pseudo 626098964 Mrps7 mitochondrial ribosomal protein S7 ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 34 (ortholog); sensorineural hearing loss (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 9 68493272 68496490 - 30032202 116910593 MODEL JAAIVD010000002;XM_032914518 XP_032770409 28S ribosomal protein S7, mitochondrial protein-coding 626098973 Nlrp6 NLR family pyrin domain containing 6 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); lipopolysaccharide binding (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); acute inflammatory response to antigenic stimulus (ortholog); antiviral innate immune response (ortholog); FOUND IN canonical inflammasome complex (ortholog); cytosol (ortholog); NLRP6 inflammasome complex (ortholog) 2 8558406 8565752 - 30032202 116890894 MODEL JAAIVD010000001;XM_032891511 XP_032747402 NACHT, LRR and PYD domains-containing protein 6 protein-coding 626098985 Nudt2 nudix hydrolase 2 ENCODES a protein that exhibits bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); developmental and epileptic encephalopathy 11 (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER WITH OR WITHOUT PERIPHERAL NEUROPATHY (ortholog) 1 4067297 4082048 - 30032202 116891383 MODEL JAAIVD010000025;XM_032892401 XP_032748292 bis(5'-nucleosyl)-tetraphosphatase [asymmetrical] protein-coding 626098992 LOC116914980 28S ribosomal protein S25, mitochondrial-like 13 23838178 23838682 + 116914980 MODEL JAAIVD010000008 pseudo 626098993 Trabd TraB domain containing ENCODES a protein that exhibits mitochondrion-mitochondrion outer membrane tether activity (ortholog); INVOLVED IN mitochondrial fusion (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 258383528 258394382 + 116914930 MODEL JAAIVD010000025;XM_032919359;XM_032919365 XP_032775250;XP_032775256 traB domain-containing protein protein-coding 626099010 Tmem247 transmembrane protein 247 FOUND IN endoplasmic reticulum (ortholog) 7 6047220 6071121 - 30032202 116905591 MODEL JAAIVD010000026;XM_032908595 XP_032764486 protein-coding 626099019 LOC116899481 60S ribosomal protein L9-like 1 103869814 103870420 + 116899481 MODEL JAAIVD010000025 pseudo 626099020 LOC116891764 olfactory receptor 1440-like 2 12390844 12392749 + 116891764 MODEL JAAIVD010000001 pseudo 626099021 Muc16 mucin 16, cell surface associated INVOLVED IN negative regulation of epithelial cell proliferation (ortholog); negative regulation of interleukin-6 production (ortholog); negative regulation of wound healing (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); cholangiocarcinoma (ortholog); dry eye syndrome (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 8 14573554 14742596 - 30032202 116907265 MODEL JAAIVD010000027;XM_032910221 XP_032766112 mucin-16 protein-coding 626099113 Sfi1 SFI1 centrin binding protein ENCODES a protein that exhibits phosphatase binding (ortholog); FOUND IN centriole (ortholog) 11 72108440 72172649 - 30032202 116912068 MODEL JAAIVD010000006;XM_032915932 XP_032771823 protein SFI1 homolog protein-coding 626099150 LOC116885097 U7 small nuclear RNA 15 43220317 43220381 + 116885097 MODEL JAAIVD010000010;XR_004385964 snrna 626099153 LOC116889321 high mobility group protein B4-like X 120235365 120235920 - 30032202 116889321 MODEL JAAIVD010000014;XM_032890444 XP_032746335 protein-coding 626099157 Svep1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); integrin binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN epidermis development (ortholog); gene expression (ortholog); lymph circulation (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 1 93349056 93517533 + 22301074;30032202 116901616 MODEL JAAIVD010000025;XM_032903665 XP_032759556 sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 protein-coding 626099209 Adamts3 ADAM metallopeptidase with thrombospondin type 1 motif 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN collagen biosynthetic process (ortholog); in utero embryonic development (ortholog); positive regulation of vascular endothelial growth factor signaling pathway (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hennekam Lymphangiectasia-Lymphedema Syndrome 3 (ortholog); prostate cancer (ortholog); FOUND IN extracellular space (ortholog) 11 3101622 3161482 - 22301074;30032202 116912644 MODEL JAAIVD010000006;XM_032916763 XP_032772654 A disintegrin and metalloproteinase with thrombospondin motifs 3 protein-coding 626099231 Katnbl1 katanin regulatory subunit B1 like 1 INVOLVED IN cytoplasmic microtubule organization (ortholog); positive regulation of cytoskeleton organization (ortholog); FOUND IN cleavage furrow (ortholog); katanin complex (ortholog); midbody (ortholog) 5 90699450 90739031 + 22301074;30032202 116901745 MODEL JAAIVD010000023;XM_032903881 XP_032759772 KATNB1-like protein 1 protein-coding 626099245 Cd6 CD6 molecule ENCODES a protein that exhibits identical protein binding (ortholog); lipopolysaccharide binding (ortholog); lipoteichoic acid binding (ortholog); INVOLVED IN acute inflammatory response to antigenic stimulus (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); immunological synapse formation (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN cell surface (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) 2 10273851 10311207 - 22301074 116890969 MODEL JAAIVD010000001;XM_032891634 XP_032747525 T-cell differentiation antigen CD6 protein-coding 626099259 LOC116903461 actin, cytoplasmic type 5-like 6 46343830 46348330 - 116903461 MODEL JAAIVD010000024 pseudo 626099260 Igf2 insulin like growth factor 2 ENCODES a protein that exhibits growth factor activity (ortholog); insulin receptor binding (ortholog); insulin-like growth factor receptor binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); cellular response to mechanical stimulus (ortholog); embryonic placenta development (ortholog); PARTICIPATES IN insulin-like growth factor signaling pathway; ASSOCIATED WITH acquired immunodeficiency syndrome (ortholog); adrenocortical carcinoma (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular space (ortholog) 2 6810703 6819348 + 22301074 116890841 MODEL JAAIVD010000001;XM_032891368;XM_032891369;XM_032891370 XP_032747259;XP_032747260;XP_032747261 insulin-like growth factor II protein-coding 626099276 LOC116914449 microcephalin-like 13 65388766 65402391 - 30032202 116914449 MODEL JAAIVD010000008;XM_032918750 XP_032774641 protein-coding 626099282 LOC116900782 antileukoproteinase-like 5 153644775 153646334 + 22301074;30032202 116900782 MODEL JAAIVD010000023;XM_032902492 XP_032758383 protein-coding 626099287 Trnal-uag transfer RNA leucine (anticodon UAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72224769 72224850 + 116914216 MODEL JAAIVD010000007 trna 626099288 LOC116888009 fibronectin type III domain containing protein 3C1-like X 78852345 78864601 - 116888009 MODEL JAAIVD010000014 pseudo 626099289 Mfge8 milk fat globule EGF and factor V/VIII domain containing ENCODES a protein that exhibits integrin binding (ortholog); phosphatidylethanolamine binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); phagocytosis, engulfment (ortholog); phagocytosis, recognition (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal cancer (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 2 121097872 121113724 + 116891947 MODEL JAAIVD010000001;XM_032893387 XP_032749278 lactadherin protein-coding 626099303 LOC116904810 U6 spliceosomal RNA 6 73735853 73735959 + 116904810 MODEL JAAIVD010000024;XR_004388461 snrna 626099306 Ptprm protein tyrosine phosphatase receptor type M ENCODES a protein that exhibits cadherin binding (ortholog); identical protein binding (ortholog); phosphatase activity (ortholog); INVOLVED IN homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of D-glucose transmembrane transport (ortholog); ASSOCIATED WITH pancreatic ductal adenocarcinoma (ortholog); schizophrenia (ortholog); FOUND IN adherens junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 4 176323155 177004852 - 22301074 116899702 MODEL JAAIVD010000003;XM_032901727 XP_032757618 receptor-type tyrosine-protein phosphatase mu protein-coding 626099345 LOC116902924 hyaluronidase-4 6 114562577 114582571 - 22301074;30032202 116902924 MODEL JAAIVD010000024;XM_032905248 XP_032761139 protein-coding 626099354 Armh3 armadillo like helical domain containing 3 INVOLVED IN regulation of Golgi organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN cytosol (ortholog); Golgi membrane (ortholog) 2 45291820 45473703 - 30032202 116891233 MODEL JAAIVD010000001;XM_032892086 XP_032747977 armadillo-like helical domain-containing protein 3 protein-coding 626099384 LOC116905873 serpin A12 7 115085972 115100465 - 30032202 116905873 MODEL JAAIVD010000026;XM_032908862 XP_032764753 protein-coding 626099393 Rad50 RAD50 double strand break repair protein ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); ATP hydrolysis activity (ortholog); DNA binding (ortholog); INVOLVED IN chromosome organization (ortholog); chromosome organization involved in meiotic cell cycle (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH asthma (ortholog); breast cancer (ortholog); Breast Cancer, Familial (ortholog); FOUND IN BRCA1-C complex (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) 9 36136164 36188600 - 22301074;30032202 116908860 MODEL JAAIVD010000002;XM_032912300 XP_032768191 DNA repair protein RAD50 protein-coding 626099422 LOC116893283 dnaJ homolog subfamily B member 6-like 2 147809779 147810909 + 116893283 MODEL JAAIVD010000001 pseudo 626099423 Far1 fatty acyl-CoA reductase 1 ENCODES a protein that exhibits alcohol-forming long-chain fatty acyl-CoA reductase activity (ortholog); alcohol-forming very long-chain fatty acyl-CoA reductase activity (ortholog); INVOLVED IN ether lipid biosynthetic process (ortholog); glycerophospholipid biosynthetic process (ortholog); long-chain fatty-acyl-CoA metabolic process (ortholog); ASSOCIATED WITH CATARACTS, SPASTIC PARAPARESIS, AND SPEECH DELAY (ortholog); genetic disease (ortholog); rhizomelic chondrodysplasia punctate type 4 (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 2 87940885 87975267 - 30032202 116891638 MODEL JAAIVD010000001;XM_032892852;XM_032892853 XP_032748743;XP_032748744 protein-coding 626099444 Nxph3 neurexophilin 3 ENCODES a protein that exhibits signaling receptor binding (ortholog) 9 58871785 58876563 + 30032202 116909870 MODEL JAAIVD010000002;XM_032913601 XP_032769492 neurexophilin-3 protein-coding 626099450 LOC116910761 uncharacterized LOC116910761 1 211657447 211659245 - 116910761 MODEL JAAIVD010000025 pseudo 626099451 Dnajc19 DnaJ heat shock protein family (Hsp40) member C19 INVOLVED IN genitalia development (ortholog); regulation of cardiolipin metabolic process (ortholog); visual perception (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH 3-methylglutaconic aciduria (ortholog); 3-methylglutaconic aciduria type 3 (ortholog); 3-methylglutaconic aciduria type 5 (ortholog); FOUND IN inner mitochondrial membrane protein complex (ortholog); matrix side of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog) 3 119748130 119752307 + 30032202 116896949 MODEL JAAIVD010000012;XM_032898517 XP_032754408 mitochondrial import inner membrane translocase subunit TIM14 protein-coding 626099461 Nxnl1 nucleoredoxin like 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN photoreceptor cell maintenance (ortholog) 13 13397936 13403911 + 30032202 116914477 MODEL JAAIVD010000008;XM_032918780 XP_032774671 nucleoredoxin-like protein 1 protein-coding 626099467 Reep1 receptor accessory protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); olfactory receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein insertion into membrane (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autosomal dominant distal hereditary motor neuronopathy 12 (ortholog); autosomal dominant distal hereditary motor neuronopathy 5 (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 74731697 74846346 + 30032202 116903688 MODEL JAAIVD010000024;XM_032906356;XM_032906357 XP_032762247;XP_032762248 receptor expression-enhancing protein 1 protein-coding 626099484 Npm2 nucleophosmin/nucleoplasmin 2 ENCODES a protein that exhibits chromatin binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst development (ortholog); chromatin remodeling (ortholog); oocyte differentiation (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 12 53699761 53706542 + 30032202 116913971 MODEL JAAIVD010000007;XM_032918240 XP_032774131 nucleoplasmin-2 protein-coding 626099496 Tbc1d10b TBC1 domain family member 10B ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN plasma membrane (ortholog) 2 74681221 74692765 + 116891485 MODEL JAAIVD010000001;XM_032892589 XP_032748480 protein-coding 626099508 LOC116885542 uncharacterized LOC116885542 16 41749912 41751992 - 116885542 MODEL JAAIVD010000004;XR_004386022 ncrna 626099513 LOC116904250 proline-rich protein 2-like 6 16132035 16134269 + 116904250 MODEL JAAIVD010000024 pseudo 626099514 Pdf peptide deformylase, mitochondrial ENCODES a protein that exhibits peptide deformylase activity (ortholog); INVOLVED IN peptidyl-methionine modification (ortholog); positive regulation of cell population proliferation (ortholog); post-translational protein modification (ortholog); FOUND IN mitochondrion (ortholog) 17 26771168 26772926 - 22301074;30032202 116886635 MODEL JAAIVD010000011;XM_032888140 XP_032744031 protein-coding 626099520 LOC116900540 olfactory receptor 4F21-like 5 89649636 89650568 + 22301074 116900540 MODEL JAAIVD010000023;XM_032902268 XP_032758159 protein-coding 626099523 LOC116900587 transmembrane and coiled-coil domain-containing protein 5B 5 91535112 91545863 + 116900587 MODEL JAAIVD010000023;XM_032902307 XP_032758198 protein-coding 626099537 Aloxe3 arachidonate epidermal lipoxygenase 3 ENCODES a protein that exhibits hydroperoxy icosatetraenoate isomerase activity (ortholog); intramolecular hydroxytransferase activity (ortholog); oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); bicellular tight junction assembly (ortholog); ceramide biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog) 9 48725451 48749193 + 22301074;30032202 116909747 MODEL JAAIVD010000002;XM_032913426;XM_032913427;XM_032913428;XM_032913429 XP_032769317;XP_032769318;XP_032769319;XP_032769320 arachidonate lipoxygenase 3;hydroperoxide isomerase ALOXE3 protein-coding 626099569 Dnajc5g DnaJ heat shock protein family (Hsp40) member C5 gamma 7 22968279 22972392 - 116905674 MODEL JAAIVD010000026;XM_032908656;XM_032908657;XM_032908658;XM_032908659 XP_032764547;XP_032764548;XP_032764549;XP_032764550 dnaJ homolog subfamily C member 5G protein-coding 626099590 Aire autoimmune regulator ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN central tolerance induction to self antigen (ortholog); humoral immune response (ortholog); negative thymic T cell selection (ortholog); ASSOCIATED WITH autoimmune polyendocrine syndrome (ortholog); autoimmune polyendocrine syndrome type 1 (ortholog); candidiasis (ortholog); FOUND IN cytoplasm (ortholog); female germ cell nucleus (ortholog); male germ cell nucleus (ortholog) 18 1315187 1330228 - 22301074;30032202 116887210 MODEL JAAIVD010000013;XM_032888765;XM_032888766;XM_032888767;XM_032888768;XM_032888769;XM_032888771;XM_032888772;XM_032888773 XP_032744656;XP_032744657;XP_032744658;XP_032744659;XP_032744660;XP_032744662;XP_032744663;XP_032744664 protein-coding 626099619 LOC116885057 small nucleolar RNA SNORA17 15 33488796 33488911 + 116885057 MODEL JAAIVD010000010 pseudo 626099620 LOC116900973 tyrosine-protein phosphatase non-receptor type substrate 1 5 108331471 108375715 + 30032202 116900973 MODEL JAAIVD010000023;XM_032902603 XP_032758494 protein-coding 626099633 Fam185a family with sequence similarity 185 member A FOUND IN mitochondrion (ortholog) 6 150708634 150758601 + 116904175 MODEL JAAIVD010000024;XM_032907078 XP_032762969 protein FAM185A protein-coding 626099645 Nkapd1 NKAP domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog) 8 45078029 45089532 - 116906843 MODEL JAAIVD010000027;XM_032909735;XM_032909736;XM_032909737;XM_032909738 XP_032765626;XP_032765627;XP_032765628;XP_032765629 uncharacterized protein NKAPD1 protein-coding 626099663 Nup37 nucleoporin 37 PARTICIPATES IN mRNA nuclear export pathway; ASSOCIATED WITH primary autosomal recessive microcephaly 24 (ortholog); FOUND IN kinetochore (ortholog); nuclear envelope (ortholog); nuclear pore outer ring (ortholog) 1 167235400 167263162 + 22301074;30032202 116907736 MODEL JAAIVD010000025;XM_032910872 XP_032766763 nucleoporin Nup37 protein-coding 626099676 Tbc1d9 TBC1 domain family member 9 ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Experimental Liver Cirrhosis (ortholog) 17 16966592 17065402 - 22301074 116886041 MODEL JAAIVD010000011;XM_032887346 XP_032743237 protein-coding 626099701 LOC116889317 eukaryotic translation initiation factor 5-like 1 131913568 131914490 + 116889317 MODEL JAAIVD010000025 pseudo 626099702 LOC116902682 lithostathine 6 37650493 37653314 + 30032202 116902682 MODEL JAAIVD010000024;XM_032905041 XP_032760932 protein-coding 626099711 Sesn3 sestrin 3 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to glucose starvation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); GATOR2 complex (ortholog); TORC2 complex (ortholog) 8 10106583 10154809 + 22301074;30032202 116908120 MODEL JAAIVD010000027;XM_032911411 XP_032767302 sestrin-3 protein-coding 626099725 Adprs ADP-ribosylserine hydrolase ENCODES a protein that exhibits ADP-ribosylserine hydrolase activity (ortholog); hydrolase activity, hydrolyzing O-glycosyl compounds (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to superoxide (ortholog); DNA repair (ortholog); negative regulation of necroptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); sensorineural hearing loss (ortholog); stress-induced childhood-onset neurodegeneration with variable ataxia and seizures (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 1 31967470 31972695 + 30032202 116896630 MODEL JAAIVD010000025;XM_032897943 XP_032753834 ADP-ribose glycohydrolase ARH3 protein-coding 626099735 Cldn12 claudin 12 INVOLVED IN tight junction assembly (ortholog); FOUND IN cell periphery (ortholog); lateral plasma membrane (ortholog); plasma membrane (ortholog) 6 137756844 137760699 - 30032202 116904128 MODEL JAAIVD010000024;XM_032907016 XP_032762907 claudin-12 protein-coding 626099740 Efcc1 EF-hand and coiled-coil domain containing 1 6 58560590 58588219 - 22301074 116902736 MODEL JAAIVD010000024;XM_032905085 XP_032760976 EF-hand and coiled-coil domain-containing protein 1 protein-coding 626099752 LOC116912610 peptidyl-prolyl cis-trans isomerase D-like 11 10923130 10924399 - 116912610 MODEL JAAIVD010000006 pseudo 626099753 Tcfl5 transcription factor like 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell differentiation (ortholog); regulation of cell population proliferation (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleus (ortholog) 5 157721265 157741130 - 22301074;30032202 116902414 MODEL JAAIVD010000023;XM_032904945 XP_032760836 transcription factor-like 5 protein protein-coding 626099762 Xkr8 XK related 8 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN engulfment of apoptotic cell (ortholog); establishment of localization in cell (ortholog); neutrophil clearance (ortholog); FOUND IN plasma membrane (ortholog) 1 25504114 25510326 + 30032202 116895412 MODEL JAAIVD010000025;XM_032896697 XP_032752588 XK-related protein 8 protein-coding 626099769 Cabp7 calcium binding protein 7 FOUND IN trans-Golgi network membrane (ortholog) 11 73715153 73725620 - 22301074 116912277 MODEL JAAIVD010000006;XM_032916272 XP_032772163 calcium-binding protein 7 protein-coding 626099778 Slc17a1 solute carrier family 17 member 1 INVOLVED IN sodium-dependent phosphate transport (ortholog); urate metabolic process (ortholog); urate transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN apical plasma membrane (ortholog) 14 42858353 42891310 + 22301074;30032202 116883394 MODEL JAAIVD010000009;XM_032884517 XP_032740408 sodium-dependent phosphate transport protein 1 protein-coding 626099795 Naa11 N-alpha-acetyltransferase 11, NatA catalytic subunit ENCODES a protein that exhibits protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN N-terminal protein amino acid acetylation (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 11 6882146 6892966 + 30032202 116912781 MODEL JAAIVD010000006;XM_032916943;XM_032916944 XP_032772834;XP_032772835 N-alpha-acetyltransferase 11 protein-coding 626099804 LOC116891701 olfactory receptor 4D9-like 2 12116523 12117296 - 116891701 MODEL JAAIVD010000001 pseudo 626099805 Mgat1 alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); protein N-linked glycosylation via asparagine (ortholog); UDP-N-acetylglucosamine catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN Golgi membrane (ortholog) 9 31961507 31964667 + 30032202 116908867 MODEL JAAIVD010000002;XM_032912306 XP_032768197 protein-coding 626099810 LOC116889252 proteasome subunit alpha type-6-like X 100239357 100240079 + 116889252 MODEL JAAIVD010000014 pseudo 626099811 LOC116884657 alpha-enolase-like 15 46124929 46126676 - 116884657 MODEL JAAIVD010000010 pseudo 626099812 Fgfrl1 fibroblast growth factor receptor like 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor activity (ortholog); heparin binding (ortholog); INVOLVED IN cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); diaphragm development (ortholog); heart valve morphogenesis (ortholog); ASSOCIATED WITH congenital diaphragmatic hernia (ortholog); Contracture (ortholog); COVID-19 (ortholog); FOUND IN cell-cell contact zone (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 11 18483517 18496281 + 30032202 116912589 MODEL JAAIVD010000006;XM_032916706 XP_032772597 fibroblast growth factor receptor-like 1 protein-coding 626099823 Gdf15 growth differentiation factor 15 ENCODES a protein that exhibits cytokine activity (ortholog); hormone activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to chemical stress (ortholog); energy homeostasis (ortholog); GDF15-GFRAL signaling pathway (ortholog); ASSOCIATED WITH anemia (ortholog); Cachexia (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog); extracellular space (ortholog) 13 12875240 12878172 - 22301074;30032202 116914871 MODEL JAAIVD010000008;XM_032919316 XP_032775207 growth/differentiation factor 15 protein-coding 626099829 Yipf5 Yip1 domain family member 5 INVOLVED IN Golgi organization (ortholog); insulin processing (ortholog); regulation of ER to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Microcephaly, Epilepsy, and Diabetes Syndrome 2 (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum exit site (ortholog) 15 4733754 4746669 + 22301074;30032202 116884514 MODEL JAAIVD010000010;XM_032885643 XP_032741534 protein YIPF5 protein-coding 626099839 Hoatz HOATZ cilia and flagella associated protein INVOLVED IN axoneme assembly (ortholog); cilium assembly (ortholog); flagellated sperm motility (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog) 8 45524001 45544160 - 22301074;30032202 116907402 MODEL JAAIVD010000027;XM_032910356 XP_032766247 C8H11orf88 UPF0722 protein C11orf88 homolog;chromosome 8 C11orf88 homolog protein-coding 626099848 LOC116914913 60S ribosomal protein L21-like 13 28044873 28049316 - 22301074;30032202 116914913 MODEL JAAIVD010000008;XM_032919350 XP_032775241 protein-coding 626099852 Zyx zyxin INVOLVED IN cell-matrix adhesion (ortholog); cellular response to type II interferon (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); cytosol (ortholog) 6 97858737 97867746 - 30032202 116903893 MODEL JAAIVD010000024;XM_032906654 XP_032762545 protein-coding 626099867 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889645 MODEL JAAIVD010000038 trna 626099868 LOC116895170 60S ribosomal protein L7-like 3 73955637 73956565 + 116895170 MODEL JAAIVD010000012 pseudo 626099869 Nexmif neurite extension and migration factor INVOLVED IN negative regulation of cell adhesion mediated by integrin (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); negative regulation of cell-matrix adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); midbody (ortholog); nucleoplasm (ortholog) X 66637998 66774791 - 30032202 116889051 MODEL JAAIVD010000014;XM_032890242 XP_032746133 protein-coding 626099878 LOC116900722 small nuclear ribonucleoprotein E-like 5 133982028 133982264 + 22301074;30032202 116900722 MODEL JAAIVD010000023;XM_032902429 XP_032758320 protein-coding 626099881 LOC116911518 40S ribosomal protein S15-like 10 51075789 51076206 + 116911518 MODEL JAAIVD010000005 pseudo 626099882 LOC116894427 keratin-associated protein 20-2-like 2 158862168 158862326 + 116894427 MODEL JAAIVD010000001;XM_032896132 XP_032752023 protein-coding 626099885 Ecm1 extracellular matrix protein 1 ENCODES a protein that exhibits interleukin-2 receptor binding (ortholog); protease binding (ortholog); INVOLVED IN chondrocyte development (ortholog); endochondral bone growth (ortholog); inflammatory response (ortholog); ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular space (ortholog) 3 61539108 61544679 + 22301074;30032202 116896539 MODEL JAAIVD010000012;XM_032897726;XM_032897727;XM_032897728 XP_032753617;XP_032753618;XP_032753619 protein-coding 626099907 LOC116892359 cation channel sperm-associated protein subunit gamma 2-like 2 166727595 166755344 + 116892359 MODEL JAAIVD010000001 pseudo 626099908 Rhbdd1 rhomboid domain containing 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); cellular response to UV (ortholog); ERAD pathway (ortholog); ASSOCIATED WITH pancreatic cancer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum quality control compartment (ortholog) 4 155210425 155328598 + 22301074;30032202 116899562 MODEL JAAIVD010000003;XM_032901458 XP_032757349 rhomboid-related protein 4 protein-coding 626099919 LOC116898129 serine protease 40 4 110726803 110732206 + 22301074 116898129 MODEL JAAIVD010000003;XM_032899503 XP_032755394 protein-coding 626099928 LOC116896511 histone H3.3-like 3 61044703 61045504 + 116896511 MODEL JAAIVD010000012 pseudo 626099929 LOC116906500 U2 spliceosomal RNA 7 81381886 81382074 + 116906500 MODEL JAAIVD010000026;XR_004388738 snrna 626099932 LOC116890903 60S ribosomal protein L9-like 2 8672914 8673566 + 116890903 MODEL JAAIVD010000001 pseudo 626099933 LOC116905099 60S ribosomal protein L10a-like 7 2419009 2419915 + 116905099 MODEL JAAIVD010000026 pseudo 626099934 LOC116895423 glyceraldehyde-3-phosphate dehydrogenase-like 3 63725741 63726852 - 116895423 MODEL JAAIVD010000012 pseudo 626099935 LOC116886712 uncharacterized LOC116886712 17 24073191 24133014 - 116886712 MODEL JAAIVD010000011;XM_032888222 XP_032744113 uncharacterized protein LOC116886712 protein-coding 626099942 Scrib scribble planar cell polarity protein ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN activation of GTPase activity (ortholog); apoptotic process involved in morphogenesis (ortholog); astrocyte cell migration (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH microcephaly (ortholog); neural tube defect (ortholog); FOUND IN adherens junction (ortholog); basolateral plasma membrane (ortholog); cell junction (ortholog) 1 248364681 248387637 - 22301074;30032202 116912884 MODEL JAAIVD010000025;XM_032917127;XM_032917137;XM_032917146 XP_032773018;XP_032773028;XP_032773037 protein scribble homolog protein-coding 626099988 LOC116913184 serine protease 55-like 12 60305700 60307412 - 22301074 116913184 MODEL JAAIVD010000007;XM_032917381 XP_032773272 protein-coding 626099994 Thrap3 thyroid hormone receptor associated protein 3 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); phosphoprotein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN circadian rhythm (ortholog); mRNA stabilization (ortholog); nuclear-transcribed mRNA catabolic process (ortholog); FOUND IN exon-exon junction complex (ortholog); mediator complex (ortholog); nuclear speck (ortholog) 1 32083565 32124193 + 30032202 116896676 MODEL JAAIVD010000025;XM_032898051 XP_032753942 thyroid hormone receptor-associated protein 3 protein-coding 626100010 Mfrp membrane frizzled-related protein INVOLVED IN eye photoreceptor cell development (ortholog); retina development in camera-type eye (ortholog); visual perception (ortholog); ASSOCIATED WITH fundus albipunctatus (ortholog); High Hyperopia (ortholog); isolated microphthalmia 5 (ortholog) 8 38662859 38668116 + 22301074;30032202 116907625 MODEL JAAIVD010000027;XM_032910682;XM_032910683 XP_032766573;XP_032766574 protein-coding 626100029 LOC116915191 small nucleolar RNA MBII-202 13 22276616 22276701 - 116915191 MODEL JAAIVD010000008;XR_004389847 snorna 626100032 LOC116888233 melanoma-associated antigen B4-like X 45129944 45131409 - 30032202 116888233 MODEL JAAIVD010000014;XM_032889519 XP_032745410 protein-coding 626100035 LOC116914735 coagulation factor XI 13 42583899 42599742 + 22301074 116914735 MODEL JAAIVD010000008;XM_032919171;XM_032919172 XP_032775062;XP_032775063 protein-coding 626100053 Gprc6a G protein-coupled receptor class C group 6 member A ENCODES a protein that exhibits G protein-coupled peptide receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 18 29284822 29307056 + 22301074;30032202 116887528 MODEL JAAIVD010000013;XM_032889158 XP_032745049 G-protein coupled receptor family C group 6 member A protein-coding 626100063 LOC116913466 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 12 18612965 18614316 - 116913466 MODEL JAAIVD010000007 pseudo 626100064 LOC116914348 uncharacterized LOC116914348 13 58982957 58992865 + 116914348 MODEL JAAIVD010000008 pseudo 626100065 LOC116904492 ubiquitin-60S ribosomal protein L40-like 6 152870769 152871274 + 116904492 MODEL JAAIVD010000024 pseudo 626100066 Col6a5 collagen type VI alpha 5 chain FOUND IN extracellular matrix (ortholog); extracellular region (ortholog) 8 97149918 97237404 - 116906940 MODEL JAAIVD010000027;XM_032909864 XP_032765755 collagen alpha-5(VI) chain protein-coding 626100107 LOC116883171 ATP synthase subunit g, mitochondrial-like 14 20658736 20659036 + 116883171 MODEL JAAIVD010000009 pseudo 626100108 Dnah17 dynein axonemal heavy chain 17 INVOLVED IN outer dynein arm assembly (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); spermatogenic failure 39 (ortholog); FOUND IN axoneme (ortholog); outer dynein arm (ortholog); sperm flagellum (ortholog) 9 65920777 66036118 + 22301074;30032202 116908716 MODEL JAAIVD010000002;XM_032912053;XM_032912054 XP_032767944;XP_032767945 dynein heavy chain 17, axonemal protein-coding 626100200 LOC116897110 uncharacterized LOC116897110 3 163768166 163781369 - 116897110 MODEL JAAIVD010000012;XR_004387397 ncrna 626100205 LOC116888979 uncharacterized LOC116888979 X 128314391 128335347 - 116888979 MODEL JAAIVD010000014;XR_004386356 ncrna 626100212 LOC116907790 T-complex protein 1 subunit zeta-like 8 27653200 27655218 - 22301074;30032202 116907790 MODEL JAAIVD010000027;XM_032910932 XP_032766823 protein-coding 626100217 LOC116912631 peptidyl-prolyl cis-trans isomerase D-like 11 988723 989790 + 116912631 MODEL JAAIVD010000006 pseudo 626100218 Ptrh2 peptidyl-tRNA hydrolase 2 ENCODES a protein that exhibits peptidyl-tRNA hydrolase activity (ortholog); INVOLVED IN negative regulation of anoikis (ortholog); negative regulation of gene expression (ortholog); positive regulation of anoikis (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); genetic disease (ortholog); Infantile-Onset Multisystem Neurologic, Endocrine, and Pancreatic Disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 9 84083014 84086933 - 22301074;30032202 116910420 MODEL JAAIVD010000002;XM_032914262 XP_032770153 peptidyl-tRNA hydrolase 2, mitochondrial protein-coding 626100223 Il10rb interleukin 10 receptor subunit beta ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-10 receptor activity (ortholog); INVOLVED IN interleukin-10-mediated signaling pathway (ortholog); positive regulation of cellular respiration (ortholog); positive regulation of receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); COVID-19 (ortholog); graft-versus-host disease (ortholog) 4 53178364 53200819 - 22301074;30032202 116898995 MODEL JAAIVD010000003;XM_032900437;XM_032900438;XM_032900440;XM_032900441 XP_032756328;XP_032756329;XP_032756331;XP_032756332 interleukin-10 receptor subunit beta protein-coding 626100250 Exoc1 exocyst complex component 1 INVOLVED IN embryo implantation (ortholog); PARTICIPATES IN insulin signaling pathway; FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 11 33258912 33309464 + 22301074;30032202 116912902 MODEL JAAIVD010000006;XM_032917160 XP_032773051 protein-coding 626100274 Ctsb cathepsin B ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN autophagy (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to thyroid hormone stimulus (ortholog); PARTICIPATES IN chaperone mediated autophagy pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); Albuminuria (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); caveola (ortholog); cell surface (ortholog) 12 61229068 61249589 - 22301074;30032202 116913364 MODEL JAAIVD010000007;XM_032917527;XM_032917528 XP_032773418;XP_032773419 protein-coding 626100290 Actg2 actin gamma 2, smooth muscle INVOLVED IN cellular response to acetaldehyde (ortholog); cellular response to interleukin-6 (ortholog); response to ethanol (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); alcoholic liver cirrhosis (ortholog); autosomal dominant familial visceral neuropathy (ortholog); FOUND IN cell periphery (ortholog) 6 62695111 62709259 + 30032202 116903605 MODEL JAAIVD010000024;XM_032906245;XM_032906246 XP_032762136;XP_032762137 actin, gamma-enteric smooth muscle protein-coding 626100304 LOC116895545 uncharacterized LOC116895545 3 121156784 121166939 - 116895545 MODEL JAAIVD010000012;XR_004387284;XR_004387285 ncrna 626100310 Ndfip1 Nedd4 family interacting protein 1 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); negative regulation of CD4-positive, alpha-beta T cell proliferation (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Stroke (ortholog); FOUND IN cell cortex (ortholog); Golgi apparatus (ortholog); perinuclear region of cytoplasm (ortholog) 15 6463493 6511062 - 22301074;30032202 116885008 MODEL JAAIVD010000010;XM_032886246;XM_032886247 XP_032742137;XP_032742138 NEDD4 family-interacting protein 1 protein-coding 626100326 LOC116895663 olfactory receptor 50-like 3 189288150 189289073 - 22301074;30032202 116895663 MODEL JAAIVD010000012;XM_032896869 XP_032752760 protein-coding 626100329 Ehd4 EH domain containing 4 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration involved in sprouting angiogenesis (ortholog); cellular response to growth factor stimulus (ortholog); endocytic recycling (ortholog); FOUND IN adherens junction (ortholog); endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 5 98241856 98306061 - 22301074;30032202 116901828 MODEL JAAIVD010000023;XM_032903992 XP_032759883 EH domain-containing protein 4 protein-coding 626100339 Pdxk pyridoxal kinase ENCODES a protein that exhibits ATP binding (ortholog); lithium ion binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN pyridoxal 5'-phosphate salvage (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth Disease Type 6C (ortholog); status epilepticus (ortholog); FOUND IN nucleoplasm (ortholog) 18 1726795 1748144 - 22301074;30032202 116887502 MODEL JAAIVD010000013;XM_032889120 XP_032745011 protein-coding 626100354 Clec1b C-type lectin domain family 1 member B ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN platelet formation (ortholog); signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 6 18188469 18196800 - 116904564 MODEL JAAIVD010000024;XM_032907362;XM_032907363;XR_004388342 XP_032763253;XP_032763254 protein-coding 626100370 Dlat dihydrolipoamide S-acetyltransferase ENCODES a protein that exhibits acetyltransferase activity (ortholog); dihydrolipoyllysine-residue acetyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN pyruvate catabolic process (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog); pyruvate dehydrogenase complex (ortholog) 8 45102661 45127471 - 22301074;30032202 116906841 MODEL JAAIVD010000027;XM_032909729 XP_032765620 dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex, mitochondrial protein-coding 626100388 Psrc1 proline and serine rich coiled-coil 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); mitotic metaphase chromosome alignment (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 3 49869047 49878451 - 30032202 116896364 MODEL JAAIVD010000012;XM_032897476;XM_032897477;XM_032897478;XM_032897479 XP_032753367;XP_032753368;XP_032753369;XP_032753370 proline/serine-rich coiled-coil protein 1 protein-coding 626100410 LOC116887602 class I histocompatibility antigen, Non-RT1.A alpha-1 chain-like 18 9379818 9383727 - 30032202 116887602 MODEL JAAIVD010000013;XM_032889220 XP_032745111 protein-coding 626100417 LOC116909821 60S ribosomal protein L37a-like 9 17011090 17011398 + 22301074 116909821 MODEL JAAIVD010000002;XM_032913534 XP_032769425 protein-coding 626100422 LOC116909864 hemoglobin subunit theta-1-like 9 3593722 3594477 - 22301074;30032202 116909864 MODEL JAAIVD010000002;XM_032913592 XP_032769483 protein-coding 626100429 Gdap1 ganglioside induced differentiation associated protein 1 INVOLVED IN cellular response to vitamin D (ortholog); mitochondrial fission (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN mitochondria fission pathway; ASSOCIATED WITH autosomal recessive axonal Charcot-Marie-Tooth disease with vocal cord paresis (ortholog); axonal neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN cytosol (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 151627432 151646728 + 30032202 116904120 MODEL JAAIVD010000025;XM_032907009 XP_032762900 ganglioside-induced differentiation-associated protein 1 protein-coding 626100439 Orc5 origin recognition complex subunit 5 INVOLVED IN DNA replication initiation (ortholog); regulation of DNA replication (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nuclear origin of replication recognition complex (ortholog) 6 151737821 151793113 - 30032202 116904185 MODEL JAAIVD010000024;XM_032907092 XP_032762983 protein-coding 626100457 Slc37a2 solute carrier family 37 member 2 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); INVOLVED IN glucose-6-phosphate transport (ortholog); phosphate ion transmembrane transport (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 33412791 33436381 - 22301074;30032202 116906864 MODEL JAAIVD010000027;XM_032909766 XP_032765657 glucose-6-phosphate exchanger SLC37A2 protein-coding 626100480 Cep43 centrosomal protein 43 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of protein kinase activity (ortholog); positive regulation of cell growth (ortholog); positive regulation of cell migration (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); nucleus (ortholog) 2 187038801 187068568 + 22301074;30032202 116892808 MODEL JAAIVD010000001;XM_032894683;XM_032894684;XM_032894685 XP_032750574;XP_032750575;XP_032750576 FGFR1 oncogene partner protein-coding 626100503 LOC116907175 erythropoietin receptor 8 18209066 18239157 - 22301074;30032202 116907175 MODEL JAAIVD010000027;XM_032910129;XM_032910130;XM_032910131;XM_032910132;XM_032910133;XM_032910134 XP_032766020;XP_032766021;XP_032766022;XP_032766023;XP_032766024;XP_032766025 ral guanine nucleotide dissociation stimulator-like 3 protein-coding 626100547 Nudt14 nudix hydrolase 14 ENCODES a protein that exhibits ADP-ribose diphosphatase activity (ortholog); identical protein binding (ortholog); UDP-sugar diphosphatase activity (ortholog) 7 130533558 130541895 - 22301074;30032202 116905524 MODEL JAAIVD010000026;XM_032908548 XP_032764439 uridine diphosphate glucose pyrophosphatase NUDT14 protein-coding 626100556 LOC116907229 olfactory receptor 7G2-like 8 15016358 15017338 + 22301074;30032202 116907229 MODEL JAAIVD010000027;XM_032910194 XP_032766085 protein-coding 626100560 LOC116890747 uncharacterized LOC116890747 2 2602151 2605727 + 116890747 MODEL JAAIVD010000001;XR_004386782 ncrna 626100565 LOC116883216 M-phase phosphoprotein 6-like 14 46109510 46117804 + 116883216 MODEL JAAIVD010000009 pseudo 626100566 LOC116908930 keratin-associated protein 9-3-like 9 54430125 54430806 - 22301074 116908930 MODEL JAAIVD010000002;XM_032912388 XP_032768279 protein-coding 626100570 LOC116888172 methylosome subunit pICln-like X 117063230 117065476 - 116888172 MODEL JAAIVD010000014 pseudo 626100571 LOC116912584 cellular tumor antigen p53-like 11 79676320 79677433 - 116912584 MODEL JAAIVD010000006 pseudo 626100572 Magi2 membrane associated guanylate kinase, WW and PDZ domain containing 2 ENCODES a protein that exhibits activin receptor binding (ortholog); beta-1 adrenergic receptor binding (ortholog); kinesin binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); clathrin-dependent endocytosis (ortholog); negative regulation of activin receptor signaling pathway (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); anxiety disorder (ortholog); Memory Disorders (ortholog); FOUND IN bicellular tight junction (ortholog); centriole (ortholog); ciliary base (ortholog) 6 148568595 150007236 + 30032202 116904162 MODEL JAAIVD010000024;XM_032907059 XP_032762950 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 2 protein-coding 626100598 Metap2 methionyl aminopeptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); metalloexopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); regulation of translational initiation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 172943069 172972600 - 22301074 116908280 MODEL JAAIVD010000025;XM_032911533;XM_032911542 XP_032767424;XP_032767433 methionine aminopeptidase 2 protein-coding 626100617 Il22ra1 interleukin 22 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-20 binding (ortholog); interleukin-22 receptor activity (ortholog); INVOLVED IN defense response to Gram-negative bacterium (ortholog); negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Rhinosinusitis (ortholog) 1 22468120 22490272 - 22301074 116890285 MODEL JAAIVD010000025;XM_032890997 XP_032746888 interleukin-22 receptor subunit alpha-1 protein-coding 626100627 Atp11c ATPase phospholipid transporting 11C ENCODES a protein that exhibits phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN phospholipid translocation (ortholog); positive regulation of B cell differentiation (ortholog); pre-B cell differentiation (ortholog); ASSOCIATED WITH X-linked congenital hemolytic anemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); phospholipid-translocating ATPase complex (ortholog); plasma membrane (ortholog) X 119283598 119451598 - 22301074;30032202 116889375 MODEL JAAIVD010000014;XM_032890477;XM_032890478;XM_032890479;XM_032890480;XM_032890481;XM_032890482;XM_032890483 XP_032746368;XP_032746369;XP_032746370;XP_032746371;XP_032746372;XP_032746373;XP_032746374 phospholipid-transporting ATPase IG protein-coding 626100678 LOC116888884 pre-mRNA-splicing factor CWC22 homolog X 17765180 17767840 - 116888884 MODEL JAAIVD010000014 pseudo 626100679 LOC116895008 small nucleolar RNA SNORA48 2 124071502 124071644 + 116895008 MODEL JAAIVD010000001;XR_004387196 snorna 626100682 Surf6 surfeit 6 ENCODES a protein that exhibits DNA binding (ortholog); molecular condensate scaffold activity (ortholog); RNA binding (ortholog); INVOLVED IN ribosome biogenesis (ortholog); FOUND IN chromosome (ortholog); granular component (ortholog); nucleolus (ortholog) 5 9750658 9760796 + 30032202 116901256 MODEL JAAIVD010000023;XM_032903013 XP_032758904 surfeit locus protein 6 protein-coding 626100691 LOC116894487 testis-expressed protein 101 2 170050062 170052817 + 30032202 116894487 MODEL JAAIVD010000001;XM_032896197 XP_032752088 protein-coding 626100699 Ssx2ip SSX family member 2 interacting protein ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN centrosome cycle (ortholog); cilium assembly (ortholog); intraciliary transport involved in cilium assembly (ortholog); FOUND IN adherens junction (ortholog); cell leading edge (ortholog); centriolar satellite (ortholog) 3 14475000 14506785 - 116896172 MODEL JAAIVD010000012;XM_032897206;XM_032897207;XM_032897208 XP_032753097;XP_032753098;XP_032753099 afadin- and alpha-actinin-binding protein protein-coding 626100723 LOC116888950 extensin-like 1 234460566 234462743 - 116888950 MODEL JAAIVD010000025;XM_032890201 XP_032746092 protein-coding 626100727 Ubr5 ubiquitin protein ligase E3 component n-recognin 5 ENCODES a protein that exhibits protein domain specific binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cytoplasm protein quality control (ortholog); cytoplasm protein quality control by the ubiquitin-proteasome system (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH breast cancer (ortholog); colon adenocarcinoma (ortholog); colon cancer (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 211421083 211528467 - 22301074;30032202 116910735 MODEL JAAIVD010000025;XM_032914586;XM_032914587 XP_032770477;XP_032770478 E3 ubiquitin-protein ligase UBR5 protein-coding 626100792 LOC116884580 cytochrome b5 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN response to cadmium ion (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Congenital Methemoglobinemia (ortholog); endometriosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 15 47492887 47524975 - 22301074;30032202 116884580 MODEL JAAIVD010000010;XM_032885722 XP_032741613 protein-coding 626100801 Ptprb protein tyrosine phosphatase receptor type B ENCODES a protein that exhibits cadherin binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN angiogenesis (ortholog); dephosphorylation (ortholog); glial cell migration (ortholog); ASSOCIATED WITH angiosarcoma (ortholog); brain glioma (ortholog); breast angiosarcoma (ortholog); FOUND IN receptor complex (ortholog) 1 194433120 194534815 + 22301074;30032202 116909133 MODEL JAAIVD010000025;XM_032912622 XP_032768513 receptor-type tyrosine-protein phosphatase beta protein-coding 626100839 Plk1 polo like kinase 1 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); ATP binding (ortholog); identical protein binding (ortholog); INVOLVED IN centrosome cycle (ortholog); centrosome separation (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH breast carcinoma (ortholog); COVID-19 (ortholog); endometriosis (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 2 79659422 79669688 - 22301074;30032202 116891555 MODEL JAAIVD010000001;XM_032892727 XP_032748618 serine/threonine-protein kinase PLK1 protein-coding 626100853 LOC116899273 uncharacterized LOC116899273 4 110656380 110661752 - 22301074 116899273 MODEL JAAIVD010000003;XM_032900902 XP_032756793 uncharacterized protein LOC116899273 protein-coding 626100859 Npw neuropeptide W ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog) 9 1937820 1939027 - 22301074;30032202 116909791 MODEL JAAIVD010000002;XM_032913487 XP_032769378 protein-coding 626100865 LOC116910670 small nucleolar RNA SNORD60 9 1811784 1811866 + 116910670 MODEL JAAIVD010000002;XR_004389202 snorna 626100868 Psapl1 prosaposin like 1 FOUND IN cytosol (ortholog) 11 68878957 68880541 - 22301074 116912768 MODEL JAAIVD010000006;XM_032916920 XP_032772811 proactivator polypeptide-like 1 protein-coding 626100871 Itch itchy E3 ubiquitin protein ligase ENCODES a protein that exhibits arrestin family protein binding (ortholog); CXCR chemokine receptor binding (ortholog); ligase activity (ortholog); INVOLVED IN CXCL12-activated CXCR4 signaling pathway (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN Notch signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Multisystem Autoimmune Disease with Facial Dysmorphism (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 5 134494345 134582451 + 22301074;30032202 116902171 MODEL JAAIVD010000023;XM_032904513 XP_032760404 E3 ubiquitin-protein ligase Itchy homolog protein-coding 626100900 LOC116883554 olfactory receptor 2B2-like 14 42026220 42027161 + 22301074 116883554 MODEL JAAIVD010000009;XM_032884734 XP_032740625 protein-coding 626100903 Sds serine dehydratase ENCODES a protein that exhibits L-serine ammonia-lyase activity (ortholog); protein homodimerization activity (ortholog); pyridoxal phosphate binding (ortholog); INVOLVED IN L-serine catabolic process (ortholog); protein-containing complex assembly (ortholog); pyruvate biosynthetic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 16 33349194 33354141 - 22301074;30032202 116885416 MODEL JAAIVD010000004;XM_032886702 XP_032742593 L-serine dehydratase/L-threonine deaminase protein-coding 626100914 LOC116900545 olfactory receptor 4K3-like 5 89742077 89743238 + 22301074 116900545 MODEL JAAIVD010000023;XM_032902272 XP_032758163 protein-coding 626100918 Kcna10 potassium voltage-gated channel subfamily A member 10 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN potassium ion transport (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); vestibular disease (ortholog) 3 51064769 51077119 - 22301074;30032202 116895369 MODEL JAAIVD010000012;XM_032896666 XP_032752557 protein-coding 626100924 LOC116904523 solute carrier organic anion transporter family member 1A6 6 7613700 7655641 - 22301074;30032202 116904523 MODEL JAAIVD010000024;XM_032907313;XM_032907314 XP_032763204;XP_032763205 protein-coding 626100945 Cetn2 centrin 2 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN centriole replication (ortholog); nucleotide-excision repair (ortholog); regulation of cytokinesis (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN 9+2 motile cilium (ortholog); apical part of cell (ortholog); centriole (ortholog) X 129460016 129465151 + 22301074;30032202 116888357 MODEL JAAIVD010000014;XM_032889625;XM_032889626 XP_032745516;XP_032745517 centrin-2 protein-coding 626100957 LOC116894740 ubiquitin-40S ribosomal protein S27a-like 2 110304875 110305346 - 116894740 MODEL JAAIVD010000001 pseudo 626100958 LOC116905189 28S ribosomal protein S17, mitochondrial-like 7 90934715 90935294 - 22301074;30032202 116905189 MODEL JAAIVD010000026;XM_032907979 XP_032763870 protein-coding 626100963 Gatm glycine amidinotransferase ENCODES a protein that exhibits amidinotransferase activity (ortholog); glycine amidinotransferase activity (ortholog); INVOLVED IN creatine biosynthetic process (ortholog); creatine metabolic process (ortholog); embryonic liver development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; creatine metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); AGAT deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 5 100670873 100687713 - 30032202 116901891 MODEL JAAIVD010000023;XM_032904099 XP_032759990 glycine amidinotransferase, mitochondrial protein-coding 626100976 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48656867 48656940 - 116910834 MODEL JAAIVD010000002 trna 626100977 Ctsk cathepsin K ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN bone resorption (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Alveolar Bone Loss (ortholog); Experimental Arthritis (ortholog); genetic disease (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); lysosome (ortholog) 3 61759854 61769187 - 30032202 116896550 MODEL JAAIVD010000012;XM_032897739 XP_032753630 protein-coding 626100988 LOC116900527 heterogeneous nuclear ribonucleoprotein H-like 5 86480624 86481923 + 116900527 MODEL JAAIVD010000023 pseudo 626100989 LOC116901623 thioredoxin 1 93608318 93620652 + 22301074;2734107 116901623 MODEL JAAIVD010000025;X14878;XM_032903679 CAA33019;XP_032759570 protein-coding 626100998 LOC116903602 prohibitin-like 6 73469088 73469699 - 116903602 MODEL JAAIVD010000024 pseudo 626100999 LOC116895452 pre-rRNA 2'-O-ribose RNA methyltransferase FTSJ3-like 3 77108380 77110860 - 116895452 MODEL JAAIVD010000012 pseudo 626101000 LOC116914157 small nucleolar RNA SNORD126 12 72510283 72510359 + 116914157 MODEL JAAIVD010000007;XR_004389707 snorna 626101003 LOC116898325 40S ribosomal protein SA-like 4 41356086 41356986 - 116898325 MODEL JAAIVD010000003 pseudo 626101004 Saraf store-operated calcium entry associated regulatory factor INVOLVED IN regulation of store-operated calcium entry (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 13 52856651 52875092 - 22301074;30032202 116914533 MODEL JAAIVD010000008;XM_032918862 XP_032774753 store-operated calcium entry-associated regulatory factor protein-coding 626101014 LOC116900499 olfactory receptor 4A5-like 5 71943573 71944535 - 22301074 116900499 MODEL JAAIVD010000023;XM_032902234 XP_032758125 protein-coding 626101018 LOC116892649 natural cytotoxicity triggering receptor 1 2 176864357 176870194 + 116892649 MODEL JAAIVD010000001;XM_032894469;XM_032894470 XP_032750360;XP_032750361 protein-coding 626101029 LOC116889445 cytochrome P450 7A1 ENCODES a protein that exhibits cholesterol 7-alpha-monooxygenase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); cellular response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; bile acid signaling pathway; cerebrotendinous xanthomatosis pathway; ASSOCIATED WITH alcoholic hepatitis (ortholog); autism spectrum disorder (ortholog); cholestasis (ortholog) 1 136703307 136710694 + 22301074;2806567;30032202 116889445 MODEL JAAIVD010000025;X17595;XM_032890518 CAB57878;XP_032746409 CYP7A1 cholesterol 7a-hydroxylase protein-coding 626101039 Best2 bestrophin 2 ENCODES a protein that exhibits bicarbonate channel activity (ortholog); chloride channel activity (ortholog); intracellularly ligand-gated monoatomic ion channel activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); FOUND IN basolateral plasma membrane (ortholog); chloride channel complex (ortholog); cilium (ortholog) 17 15278446 15283970 + 22301074 116886348 MODEL JAAIVD010000011;XM_032887799 XP_032743690 bestrophin-2 protein-coding 626101052 Egln2 egl-9 family hypoxia inducible factor 2 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); ferrous iron binding (ortholog); oxygen sensor activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); peptidyl-proline hydroxylation to 4-hydroxy-L-proline (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH renal cell carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 168776521 168784731 + 22301074;30032202 116892443 MODEL JAAIVD010000001;XM_032894139;XM_032894140 XP_032750030;XP_032750031 egl nine homolog 2 protein-coding 626101065 LOC116889295 uncharacterized LOC116889295 X 64879893 64911128 - 116889295 MODEL JAAIVD010000014;XR_004386372;XR_004386373 ncrna 626101074 LOC116901058 60S ribosomal protein L28-like 5 142152660 142153881 - 116901058 MODEL JAAIVD010000023 pseudo 626101075 Kazald1 Kazal type serine peptidase inhibitor domain 1 INVOLVED IN extracellular matrix organization (ortholog); FOUND IN extracellular matrix (ortholog); interstitial matrix (ortholog) 2 44581321 44586385 + 22301074;30032202 116891223 MODEL JAAIVD010000001;XM_032892062;XM_032892064 XP_032747953;XP_032747955 kazal-type serine protease inhibitor domain-containing protein 1 protein-coding 626101088 LOC116894330 fatty acyl-CoA reductase 1-like 2 151984177 151985792 - 116894330 MODEL JAAIVD010000001 pseudo 626101089 LOC116900032 transcription elongation factor A protein 1-like 5 13099707 13100532 + 116900032 MODEL JAAIVD010000023 pseudo 626101090 Eogt EGF domain specific O-linked N-acetylglucosamine transferase ENCODES a protein that exhibits protein O-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog); ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 4 (ortholog); genetic disease (ortholog) 6 49886834 49916332 + 30032202 116903476 MODEL JAAIVD010000024;XM_032906043 XP_032761934 EGF domain-specific O-linked N-acetylglucosamine transferase protein-coding 626101111 LOC116912910 C1GALT1-specific chaperone 1-like 11 47105644 47106597 + 30032202 116912910 MODEL JAAIVD010000006;XM_032917167 XP_032773058 protein-coding 626101114 Bicral BICRA like chromatin remodeling complex associated protein ASSOCIATED WITH autism spectrum disorder (ortholog); prostate cancer (ortholog); FOUND IN SWI/SNF complex (ortholog) 4 82983026 83067958 + 30032202 116899093 MODEL JAAIVD010000003;XM_032900601;XM_032900602;XM_032900603 XP_032756492;XP_032756493;XP_032756494 BRD4 interacting chromatin remodeling complex associated protein like;BRD4-interacting chromatin-remodeling complex-associated protein-like protein-coding 626101138 Cd300lg CD300 molecule like family member g ENCODES a protein that exhibits IgM binding (ortholog); INVOLVED IN immunoglobulin transcytosis in epithelial cells (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 9 61334570 61347269 + 30032202 116909195 MODEL JAAIVD010000002;XM_032912691;XM_032912692;XM_032912693;XM_032912694 XP_032768582;XP_032768583;XP_032768584;XP_032768585 CMRF35-like molecule 9 protein-coding 626101152 Ift46 intraflagellar transport 46 INVOLVED IN cilium assembly (ortholog); smoothened signaling pathway (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) 8 39301179 39323899 + 22301074;30032202 116908105 MODEL JAAIVD010000027;XM_032911383;XM_032911384;XM_032911385 XP_032767274;XP_032767275;XP_032767276 intraflagellar transport protein 46 homolog protein-coding 626101175 Samd13 sterile alpha motif domain containing 13 3 14227636 14263938 + 22301074 116895288 MODEL JAAIVD010000012;XM_032896600 XP_032752491 sterile alpha motif domain-containing protein 13 protein-coding 626101182 LOC116908857 ATP synthase subunit g, mitochondrial-like 9 93971326 93971718 + 116908857 MODEL JAAIVD010000002 pseudo 626101183 LOC116895036 small nucleolar RNA SNORA17 2 22397573 22397704 - 116895036 MODEL JAAIVD010000001;XR_004387222 snorna 626101186 Clec4f C-type lectin domain family 4 member F ENCODES a protein that exhibits galactose binding (ortholog); glycolipid binding (ortholog); INVOLVED IN NK T cell activation (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 6 62593955 62603904 + 116902750 MODEL JAAIVD010000024;XM_032905097 XP_032760988 protein-coding 626101197 Ep300 EP300 lysine acetyltransferase ENCODES a protein that exhibits acetylation-dependent protein binding (ortholog); acetyltransferase activity (ortholog); acyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); apoptotic process (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN androgen signaling pathway; cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); alcohol use disorder (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 251334176 251404863 + 22301074;30032202 116914008 MODEL JAAIVD010000025;XM_032918283 XP_032774174 E1A binding protein p300;histone acetyltransferase p300 protein-coding 626101232 LOC116888590 cysteine protease ATG4A X 93379015 93419423 + 22301074 116888590 MODEL JAAIVD010000014;XM_032889889 XP_032745780 protein-coding 626101245 Nfe2l3 NFE2 like bZIP transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH keratoconus (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 6 89635933 89662667 - 30032202 116903820 MODEL JAAIVD010000024;XM_032906533 XP_032762424 nuclear factor erythroid 2-related factor 3;nuclear factor, erythroid 2 like 3 protein-coding 626101253 LOC116883248 sperm motility kinase 4A-like 14 68717727 68729746 + 22301074;30032202 116883248 MODEL JAAIVD010000009;XM_032884249 XP_032740140 protein-coding 626101257 LOC116913995 lys-63-specific deubiquitinase BRCC36-like 12 56168126 56168996 + 116913995 MODEL JAAIVD010000007 pseudo 626101258 LOC116904634 40S ribosomal protein S15a-like 6 31558441 31558841 - 116904634 MODEL JAAIVD010000024 pseudo 626101259 LOC116915073 uncharacterized LOC116915073 13 27579498 27583775 - 116915073 MODEL JAAIVD010000008;XR_004389794 ncrna 626101263 LOC116897843 prothymosin alpha-like 4 14394506 14394854 - 116897843 MODEL JAAIVD010000003 pseudo 626101264 LOC116900571 40S ribosomal protein S28-like 5 90267671 90267880 + 116900571 MODEL JAAIVD010000023 pseudo 626101265 Izumo4 IZUMO family member 4 1 154178269 154181269 - 30032202 116904920 MODEL JAAIVD010000025;XM_032907540;XM_032907550;XM_032907558;XM_032907566 XP_032763431;XP_032763441;XP_032763449;XP_032763457 izumo sperm-egg fusion protein 4 protein-coding 626101287 LOC116884725 40S ribosomal protein S23-like 15 70314154 70314666 - 22301074;30032202 116884725 MODEL JAAIVD010000010;XM_032885913 XP_032741804 protein-coding 626101292 Cdk16 cyclin dependent kinase 16 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN exocytosis (ortholog); growth hormone secretion (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); oligospermia (ortholog); Teratozoospermia (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) X 3146588 3158145 - 22301074;30032202 116887810 MODEL JAAIVD010000014;XM_032889335 XP_032745226 cyclin-dependent kinase 16 protein-coding 626101312 LOC116897498 small nucleolar RNA SNORA14 3 172359606 172359710 - 116897498 MODEL JAAIVD010000012;XR_004387519 snorna 626101315 Slc13a4 solute carrier family 13 member 4 ENCODES a protein that exhibits sodium:sulfate symporter activity (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); liver cirrhosis (ortholog) 6 104359684 104395833 + 22301074;30032202 116904416 MODEL JAAIVD010000024;XM_032907260 XP_032763151 protein-coding 626101334 LOC116886815 transmembrane protein 258-like 18 40121128 40121364 + 116886815 MODEL JAAIVD010000013 pseudo 626101335 Cuedc2 CUE domain containing 2 INVOLVED IN negative regulation of cytokine production involved in inflammatory response (ortholog); negative regulation of macrophage cytokine production (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 2 45792182 45800295 - 22301074 116891243 MODEL JAAIVD010000001;XM_032892111;XM_032892112;XM_032892114;XM_032892115;XM_032892116;XM_032892117;XM_032892118;XM_032892119 XP_032748002;XP_032748003;XP_032748005;XP_032748006;XP_032748007;XP_032748008;XP_032748009;XP_032748010 CUE domain-containing protein 2 protein-coding 626101369 Arhgap12 Rho GTPase activating protein 12 INVOLVED IN actin filament organization (ortholog); morphogenesis of an epithelial sheet (ortholog); negative regulation of small GTPase mediated signal transduction (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); phagocytic cup (ortholog); postsynapse (ortholog) 14 32337882 32479949 - 22301074;30032202 116883811 MODEL JAAIVD010000009;XM_032885059;XM_032885060;XM_032885061;XM_032885062;XM_032885063 XP_032740950;XP_032740951;XP_032740952;XP_032740953;XP_032740954 rho GTPase-activating protein 12 protein-coding 626101399 Snrpf small nuclear ribonucleoprotein polypeptide F ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); nasopharynx carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) 1 172660784 172667044 - 22301074;30032202 116908251 MODEL JAAIVD010000025;XM_032911509 XP_032767400 small nuclear ribonucleoprotein F protein-coding 626101407 LOC116889721 ATP synthase gamma chain-like 22301074;30032202 116889721 MODEL JAAIVD010000061;XM_032890599 XP_032746490 protein-coding 626101408 LOC116913975 olfactory receptor 4E1-like 12 71404450 71405449 + 22301074 116913975 MODEL JAAIVD010000007;XM_032918247 XP_032774138 protein-coding 626101412 LOC116889064 60S ribosomal protein L39-like X 23664867 23667631 - 22301074;30032202 116889064 MODEL JAAIVD010000014;XM_032890249 XP_032746140 protein-coding 626101417 LOC116900648 high mobility group protein B2-like 5 112374983 112375819 + 116900648 MODEL JAAIVD010000023 pseudo 626101418 LOC116895579 calcium-binding mitochondrial carrier protein SCaMC-1-like 3 137972017 137974919 - 30032202 116895579 MODEL JAAIVD010000012;XM_032896806 XP_032752697 protein-coding 626101424 LOC116893178 olfactory receptor 52L1-like 2 103398357 103399737 - 22301074 116893178 MODEL JAAIVD010000001;XM_032895083 XP_032750974 protein-coding 626101428 LOC116901067 zinc finger protein 844-like 5 142539315 142549580 - 116901067 MODEL JAAIVD010000023 pseudo 626101429 Slc31a2 solute carrier family 31 member 2 ENCODES a protein that exhibits copper ion transmembrane transporter activity (ortholog); INVOLVED IN copper ion import (ortholog); copper ion transport (ortholog); intracellular copper ion homeostasis (ortholog); FOUND IN late endosome (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 1 91231642 91241484 - 22301074;30032202 116901443 MODEL JAAIVD010000025;XM_032903376 XP_032759267 probable low affinity copper uptake protein 2 protein-coding 626101437 Map2k6 mitogen-activated protein kinase kinase 6 ENCODES a protein that exhibits identical protein binding (ortholog); MAP kinase kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN bone development (ortholog); cardiac muscle contraction (ortholog); cellular response to sorbitol (ortholog); PARTICIPATES IN adenosine signaling pathway; cardiomyopathy pathway; FasL mediated signaling pathway; ASSOCIATED WITH allergic disease (ortholog); Animal Mammary Neoplasms (ortholog); Brain Death (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 9 78781960 78902641 - 22301074;30032202 116909397 MODEL JAAIVD010000002;XM_032912958;XM_032912959;XM_032912960 XP_032768849;XP_032768850;XP_032768851 dual specificity mitogen-activated protein kinase kinase 6 protein-coding 626101461 Slc75a1 solute carrier family 75 member 1 ENCODES a protein that exhibits organic anion transmembrane transporter activity (ortholog); INVOLVED IN sodium-independent organic anion transport (ortholog); FOUND IN brush border membrane (ortholog); cytoplasmic vesicle membrane (ortholog); nuclear inner membrane (ortholog) 11 70420097 70423306 + 22301074;30032202 116912611 MODEL JAAIVD010000006;XM_032916736;XM_032916737;XM_032916738;XM_032916739 XP_032772627;XP_032772628;XP_032772629;XP_032772630 Mfsd10 major facilitator superfamily domain containing 10;major facilitator superfamily domain-containing protein 10 protein-coding 626101486 Htr2a 5-hydroxytryptamine receptor 2A ENCODES a protein that exhibits 1-(4-iodo-2,5-dimethoxyphenyl)propan-2-amine binding (ortholog); G protein-coupled serotonin receptor activity (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); behavioral response to cocaine (ortholog); detection of mechanical stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH Acute Stress Disorders, Traumatic (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cell body fiber (ortholog); dendrite (ortholog); dendritic shaft (ortholog) 12 49678802 49745068 - 22301074;30032202 116913511 MODEL JAAIVD010000007;XM_032917716 XP_032773607 protein-coding 626101493 Fstl3 follistatin like 3 ENCODES a protein that exhibits activin binding (ortholog); fibronectin binding (ortholog); INVOLVED IN adrenal gland development (ortholog); cellular response to metal ion (ortholog); hematopoietic progenitor cell differentiation (ortholog); FOUND IN extracellular space (ortholog); neuron projection terminus (ortholog); nucleoplasm (ortholog) 1 155090495 155096083 - 22301074;30032202 116889868 MODEL JAAIVD010000025;XM_032890695 XP_032746586 follistatin-related protein 3 protein-coding 626101501 LOC116886903 calcium homeostasis modulator protein 6 18 24159710 24161336 - 30032202 116886903 MODEL JAAIVD010000013;XM_032888369 XP_032744260 protein-coding 626101507 Spata33 spermatogenesis associated 33 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); mitochondrion (ortholog) 17 42817438 42827744 + 30032202 116886133 MODEL JAAIVD010000011;XM_032887476 XP_032743367 spermatogenesis-associated protein 33 protein-coding 626101514 LOC116893100 scavenger receptor cysteine-rich domain-containing protein SCART1-like 2 61594432 61608816 + 22301074 116893100 MODEL JAAIVD010000001;XM_032895041 XP_032750932 protein-coding 626101529 Sh3kbp1 SH3 domain containing kinase binding protein 1 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN cell migration (ortholog); cytoskeleton organization (ortholog); positive regulation of B cell activation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); immunodeficiency 61 (ortholog); Laterality Defects, Autosomal Dominant (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); endocytic vesicle (ortholog) X 32881363 33229056 - 22301074 116888716 MODEL JAAIVD010000014;XM_032890002;XM_032890003;XM_032890004;XM_032890005;XM_032890006;XM_032890007;XM_032890008;XM_032890009 XP_032745893;XP_032745894;XP_032745895;XP_032745896;XP_032745897;XP_032745898;XP_032745899;XP_032745900 SH3 domain-containing kinase-binding protein 1 protein-coding 626101573 Lcn10 lipocalin 10 INVOLVED IN heart development (ortholog); inflammatory response (ortholog); macrophage activation (ortholog) 5 11505031 11508544 - 30032202 116900095 MODEL JAAIVD010000023;XM_032901873 XP_032757764 epididymal-specific lipocalin-10 protein-coding 626101583 Ccdc22 CCC complex scaffolding subunit CCDC22 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN endocytic recycling (ortholog); Golgi to plasma membrane transport (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Ritscher-Schinzel syndrome (ortholog); Ritscher-Schinzel syndrome 1 (ortholog); FOUND IN centrosome (ortholog) X 14529557 14542882 + 30032202 116888760 MODEL JAAIVD010000014;XM_032890052 XP_032745943 coiled-coil domain containing 22;coiled-coil domain-containing protein 22 protein-coding 626101604 Sec13 SEC13 homolog, nuclear pore and COPII component ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN mRNA nuclear export pathway; FOUND IN COPII vesicle coat (ortholog); GATOR2 complex (ortholog); kinetochore (ortholog) 6 32793323 32806474 + 22301074;30032202 116903397 MODEL JAAIVD010000024;XM_032905908 XP_032761799 SEC13 homolog, nuclear pore and COPII coat complex component;protein SEC13 homolog protein-coding 626101617 Itga10 integrin subunit alpha 10 ENCODES a protein that exhibits collagen binding involved in cell-matrix adhesion (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); integrin-mediated signaling pathway (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH osteochondrodysplasia (ortholog); FOUND IN integrin alpha10-beta1 complex (ortholog) 3 60641019 60658854 - 22301074;30032202 116895403 MODEL JAAIVD010000012;XM_032896687;XM_032896688;XM_032896689 XP_032752578;XP_032752579;XP_032752580 integrin alpha-10 protein-coding 626101655 Tmed7 transmembrane p24 trafficking protein 7 ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 15 40455525 40462958 + 30032202 116884912 MODEL JAAIVD010000010;XM_032886135 XP_032742026 transmembrane emp24 domain-containing protein 7 protein-coding 626101662 Hnf4a hepatocyte nuclear factor 4 alpha ENCODES a protein that exhibits arachidonate binding (ortholog); chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); blood coagulation (ortholog); cell differentiation (ortholog); PARTICIPATES IN forkhead class A signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH Congenital Hyperinsulinism (ortholog); diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 154392343 154428370 - 22301074;2279702;30032202 116902377 MODEL JAAIVD010000023;X57133;XM_032904881;XM_032904882;XM_032904883;XM_032904884;XM_032904885;XM_032904886;XM_032904888;XM_032904889;XM_032904890 CAA40412;XP_032760772;XP_032760773;XP_032760774;XP_032760775;XP_032760776;XP_032760777;XP_032760779;XP_032760780;XP_032760781 hepatocyte nuclear factor 4-alpha;transcription factor HNF-4 protein-coding 626101694 LOC116899836 small nucleolar RNA SNORA48 4 29722904 29723047 - 116899836 MODEL JAAIVD010000003;XR_004387833 snorna 626101697 LOC116895507 WD repeat-containing protein 61-like 3 109847191 109848183 + 116895507 MODEL JAAIVD010000012 pseudo 626101698 LOC116887763 U6 spliceosomal RNA 18 3095954 3096055 + 116887763 MODEL JAAIVD010000013;XR_004386263 snrna 626101701 LOC116893190 olfactory receptor 52B2 2 104186073 104187404 - 22301074 116893190 MODEL JAAIVD010000001;XM_032895092 XP_032750983 protein-coding 626101705 LOC116892348 uncharacterized LOC116892348 2 166172463 166174771 - 116892348 MODEL JAAIVD010000001;XR_004386944 ncrna 626101709 LOC116895866 non-POU domain-containing octamer-binding protein-like 3 96459128 96461056 - 116895866 MODEL JAAIVD010000012 pseudo 626101710 LOC116900378 olfactory receptor 5L1-like 5 69547057 69547992 - 116900378 MODEL JAAIVD010000023 pseudo 626101711 Golga3 golgin A3 FOUND IN cytosol (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 16 44131496 44179942 - 116885587 MODEL JAAIVD010000004;XM_032886884;XM_032886885;XM_032886886;XM_032886887;XM_032886888 XP_032742775;XP_032742776;XP_032742777;XP_032742778;XP_032742779 golgin subfamily A member 3 protein-coding 626101753 LOC116890392 U6 spliceosomal RNA 1 109882310 109882405 - 116890392 MODEL JAAIVD010000025 pseudo 626101754 Inhba inhibin subunit beta A ENCODES a protein that exhibits cytokine activity (ortholog); identical protein binding (ortholog); peptide hormone binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); androgen metabolic process (ortholog); androst-4-ene-3,17-dione biosynthetic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); Brain Hypoxia-Ischemia (ortholog); congestive heart failure (ortholog); FOUND IN activin A complex (ortholog); enzyme activator complex (ortholog); extracellular region (ortholog) 14 33650259 33665925 - 22301074;30032202 116883802 MODEL JAAIVD010000009;XM_032885047;XM_032885048;XM_032885049 XP_032740938;XP_032740939;XP_032740940 inhibin beta A chain protein-coding 626101767 Tacr3 tachykinin receptor 3 ENCODES a protein that exhibits tachykinin receptor activity (ortholog); INVOLVED IN conditioned place preference (ortholog); drinking behavior (ortholog); positive regulation of blood pressure (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); dendrite membrane (ortholog); dendritic spine head (ortholog) 3 24932465 25031641 + 22301074;30032202 116895313 MODEL JAAIVD010000012;XM_032896623 XP_032752514 neuromedin-K receptor protein-coding 626101776 Top1mt DNA topoisomerase I mitochondrial ASSOCIATED WITH sensorineural hearing loss (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 1 247976719 247999015 - 22301074;30032202 116912831 MODEL JAAIVD010000025;XM_032917022 XP_032772913 DNA topoisomerase I, mitochondrial protein-coding 626101794 LOC116908449 U4 spliceosomal RNA 8 114769002 114769088 - 116908449 MODEL JAAIVD010000027 pseudo 626101795 Pym1 PYM1 exon junction complex associated factor ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN exon-exon junction complex disassembly (ortholog); nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); positive regulation of translation (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) 1 156221873 156243375 + 30032202 116906452 MODEL JAAIVD010000025;XM_032909221;XM_032909222;XM_032909223;XM_032909224;XM_032909225;XM_032909226;XM_032909227 XP_032765112;XP_032765113;XP_032765114;XP_032765115;XP_032765116;XP_032765117;XP_032765118 PYM homolog 1, exon junction complex associated factor;partner of Y14 and mago protein-coding 626101830 LOC116887442 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8572737 8579428 - 116887442 MODEL JAAIVD010000013 pseudo 626101831 LOC116884985 uncharacterized LOC116884985 15 75871653 75873816 + 116884985 MODEL JAAIVD010000010;XR_004385911 ncrna 626101835 LOC116887429 rano class II histocompatibility antigen, B alpha chain-like 18 8010463 8014655 + 22301074;30032202 116887429 MODEL JAAIVD010000013;XM_032889045 XP_032744936 protein-coding 626101843 LOC116900823 uncharacterized LOC116900823 5 42720685 42731787 + 116900823 MODEL JAAIVD010000023 pseudo 626101844 Copg2 coat protein complex I subunit gamma 2 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Weight Gain (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); Golgi membrane (ortholog) 6 108695426 108814385 + 22301074;30032202 116903996 MODEL JAAIVD010000024;XM_032906801 XP_032762692 COPI coat complex subunit gamma 2;coatomer subunit gamma-2 protein-coding 626101872 LOC116888160 ATP synthase subunit gamma, mitochondrial-like X 114795963 114809274 - 116888160 MODEL JAAIVD010000014 pseudo 626101873 Snrnp48 small nuclear ribonucleoprotein U11/U12 subunit 48 FOUND IN cytosol (ortholog); nucleoplasm (ortholog); U12-type spliceosomal complex (ortholog) 14 57251974 57271517 + 30032202 116883323 MODEL JAAIVD010000009;XM_032884390;XM_032884392;XR_004385746 XP_032740281;XP_032740283 U11/U12 small nuclear ribonucleoprotein 48 kDa protein protein-coding 626101893 Cdh6 cadherin 6 INVOLVED IN female gonad development (ortholog); Notch signaling pathway (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH Cachexia (ortholog); FOUND IN cell junction (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 3 167923543 168062484 + 22301074;30032202 116897113 MODEL JAAIVD010000012;XM_032898755 XP_032754646 cadherin-6 protein-coding 626101910 LOC116901027 sperm motility kinase X-like 5 129704481 129705123 - 116901027 MODEL JAAIVD010000023 pseudo 626101911 Fnta farnesyltransferase, CAAX box, subunit alpha ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); alpha-tubulin binding (ortholog); CAAX-protein geranylgeranyltransferase activity (ortholog); INVOLVED IN enzyme-linked receptor protein signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); nuclear envelope organization (ortholog); FOUND IN CAAX-protein geranylgeranyltransferase complex (ortholog); microtubule associated complex (ortholog); protein farnesyltransferase complex (ortholog) 13 60491798 60509514 + 30032202 116914584 MODEL JAAIVD010000008;XM_032918941 XP_032774832 farnesyltransferase, CAAX box, alpha;protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha protein-coding 626101924 Usp11 ubiquitin specific peptidase 11 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN protein deubiquitination (ortholog); ASSOCIATED WITH bronchiectasis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 3127071 3143352 - 22301074 116887809 MODEL JAAIVD010000014;XM_032889334 XP_032745225 ubiquitin carboxyl-terminal hydrolase 11 protein-coding 626101949 LOC116883228 endoplasmic reticulum resident protein 29-like 14 53926912 53927687 + 22301074;30032202 116883228 MODEL JAAIVD010000009;XM_032884241 XP_032740132 protein-coding 626101952 LOC116914350 A disintegrin and metallopeptidase domain 3-like 13 61722309 61770974 + 22301074;30032202 116914350 MODEL JAAIVD010000008;XM_032918564 XP_032774455 protein-coding 626101975 LOC116906117 40S ribosomal protein S8-like 7 82808225 82808768 - 116906117 MODEL JAAIVD010000026 pseudo 626101976 Sipa1l3 signal induced proliferation associated 1 like 3 INVOLVED IN cytoskeleton organization (ortholog); epithelial cell morphogenesis (ortholog); establishment of epithelial cell polarity (ortholog); ASSOCIATED WITH cataract 45 (ortholog); FOUND IN apical part of cell (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 2 166547132 166630681 + 22301074;30032202 116892350 MODEL JAAIVD010000001;XM_032893991;XM_032893992 XP_032749882;XP_032749883 signal-induced proliferation-associated 1-like protein 3 protein-coding 626102004 Apobec2 apolipoprotein B mRNA editing enzyme catalytic subunit 2 ENCODES a protein that exhibits cytidine deaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cytidine to uridine editing (ortholog); mRNA modification (ortholog); positive regulation of gene expression via chromosomal CpG island demethylation (ortholog) 4 81495010 81508548 + 30032202 116899069 MODEL JAAIVD010000003;XM_032900553 XP_032756444 C->U-editing enzyme APOBEC-2 protein-coding 626102011 Grk6 G protein-coupled receptor kinase 6 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); G protein-coupled receptor kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); desensitization of G protein-coupled receptor signaling pathway (ortholog); negative regulation of anion channel activity (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; corticotropin-releasing hormone signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Drug-Induced Dyskinesia (ortholog); opiate dependence (ortholog) 14 73760628 73777172 + 22301074;30032202 116883470 MODEL JAAIVD010000009;XM_032884622;Y09365 CAA70542;XP_032740513 protein-coding 626102031 LOC116895165 high mobility group protein B2-like 3 61398449 61398925 + 22301074;30032202 116895165 MODEL JAAIVD010000012;XM_032896526 XP_032752417 protein-coding 626102035 LOC116884136 U6 spliceosomal RNA 14 43554948 43555043 - 116884136 MODEL JAAIVD010000009 pseudo 626102036 Ccdc200 coiled-coil domain containing 200 ASSOCIATED WITH COVID-19 (ortholog) 9 60874835 60879204 - 116908970 MODEL JAAIVD010000002;XM_032912433 XP_032768324 coiled-coil domain-containing protein 200 protein-coding 626102042 Sdr42e2 short chain dehydrogenase/reductase family 42E, member 2 2 80963249 80984183 - 22301074 116893916 MODEL JAAIVD010000001;XM_032895639 XP_032751530 putative short-chain dehydrogenase/reductase family 42E member 2 protein-coding 626102056 LOC116907143 NXPE family member 1-like 8 42923676 42934199 + 116907143 MODEL JAAIVD010000027;XM_032910112 XP_032766003 protein-coding 626102064 LOC116900844 ammonium transporter Rh type A-like 5 55996061 56000657 - 22301074;30032202 116900844 MODEL JAAIVD010000023;XM_032902540 XP_032758431 protein-coding 626102069 LOC116900569 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma-like 1 70064900 70066368 + 22301074 116900569 MODEL JAAIVD010000025;XM_032902295 XP_032758186 protein-coding 626102073 LOC116895920 cyclin-dependent kinases regulatory subunit 1-like 3 121137397 121137633 + 30032202 116895920 MODEL JAAIVD010000012;XM_032896995 XP_032752886 protein-coding 626102076 Pgbd2 piggyBac transposable element derived 2 9 40000656 40002594 + 30032202 116909908 MODEL JAAIVD010000002;XM_032913661 XP_032769552 piggyBac transposable element-derived protein 2 protein-coding 626102082 Cln5 CLN5 lysosomal BMP synthase ENCODES a protein that exhibits bis(monoacylglycero)phosphate synthase activity (ortholog); D-mannose binding (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN brain development (ortholog); glycosylation (ortholog); lysosomal lumen acidification (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); lysosomal membrane (ortholog) 12 21643614 21653295 - 22301074;30032202 116913770 MODEL JAAIVD010000007;XM_032918076 XP_032773967 CLN5 intracellular trafficking protein;ceroid-lipofuscinosis neuronal protein 5 protein-coding 626102090 LOC116908839 uncharacterized LOC116908839 1 188620408 188621655 - 116908839 MODEL JAAIVD010000025;XR_004389031 ncrna 626102094 Dusp22 dual specificity phosphatase 22 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine kinase binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); intracellular signal transduction (ortholog); negative regulation of cell migration (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN cytoplasm (ortholog); filamentous actin (ortholog); leading edge of lamellipodium (ortholog) 14 49696759 49746420 + 22301074;30032202 116883486 MODEL JAAIVD010000009;XM_032884641;XM_032884642;XM_032884643 XP_032740532;XP_032740533;XP_032740534 dual specificity protein phosphatase 22 protein-coding 626102114 LOC116887968 interferon alpha-5-like 1 65454922 65455491 - 22301074;30032202 116887968 MODEL JAAIVD010000025;XM_032889411 XP_032745302 protein-coding 626102117 LOC116904620 olfactory receptor 6C75-like 6 30068759 30069721 - 22301074;30032202 116904620 MODEL JAAIVD010000024;XM_032907411 XP_032763302 protein-coding 626102120 LOC116895346 pancreatic alpha-amylase 3 46026978 46035328 + 22301074 116895346 MODEL JAAIVD010000012;XM_032896646;XM_032896647;XM_032896648 XP_032752537;XP_032752538;XP_032752539 protein-coding 626102137 LOC116906468 small nucleolar RNA SNORA17 7 41531048 41531179 - 116906468 MODEL JAAIVD010000026;XR_004388721 snorna 626102140 LOC116894972 small nucleolar RNA SNORA15 2 117590747 117590893 + 116894972 MODEL JAAIVD010000001 pseudo 626102141 LOC116889775 motile sperm domain-containing protein 3-like 30032202 116889775 MODEL JAAIVD010000116;XM_032890631 XP_032746522 protein-coding 626102142 LOC116887497 uncharacterized LOC116887497 18 9244529 9246618 + 116887497 MODEL JAAIVD010000013;XR_004386223 ncrna 626102146 Emilin1 elastin microfibril interfacer 1 ENCODES a protein that exhibits extracellular matrix constituent conferring elasticity (ortholog); identical protein binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); cell adhesion mediated by integrin (ortholog); cell migration (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); ARTERIAL TORTUOSITY-BONE FRAGILITY SYNDROME (ortholog); autosomal dominant distal hereditary motor neuronopathy 10 (ortholog); FOUND IN EMILIN complex (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 7 23162020 23169856 - 22301074;30032202 116905994 MODEL JAAIVD010000026;XM_032909026;XM_032909027 XP_032764917;XP_032764918 EMILIN-1 protein-coding 626102161 LOC116892415 NHP2-like protein 1 2 168191002 168191362 + 116892415 MODEL JAAIVD010000001 pseudo 626102162 Hsf2bp heat shock transcription factor 2 binding protein INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); female meiosis I (ortholog); male meiosis I (ortholog); ASSOCIATED WITH primary ovarian insufficiency 19 (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 1833423 1915602 + 30032202 116887147 MODEL JAAIVD010000013;XM_032888695 XP_032744586 heat shock factor 2-binding protein protein-coding 626102174 LOC116901326 glutathione S-transferase P-like 5 12165834 12166445 + 116901326 MODEL JAAIVD010000023 pseudo 626102175 LOC116908437 U2 spliceosomal RNA 8 39392313 39392503 + 116908437 MODEL JAAIVD010000027;XR_004388965 snrna 626102178 Peg10 paternally expressed 10 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN mRNA transport (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); placenta development (ortholog); ASSOCIATED WITH Kidney Reperfusion Injury (ortholog); pre-eclampsia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular vesicle (ortholog) 6 133856470 133866511 - 22301074;30032202 116904462 MODEL JAAIVD010000024;XM_032907276 XP_032763167 retrotransposon-derived protein PEG10 protein-coding 626102184 LOC116884947 60S ribosomal protein L6-like 15 25669732 25676786 + 116884947 MODEL JAAIVD010000010 pseudo 626102185 Anapc13 anaphase promoting complex subunit 13 INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); protein branched polyubiquitination (ortholog); protein K11-linked ubiquitination (ortholog); FOUND IN anaphase-promoting complex (ortholog) 8 93925228 93933330 + 22301074;30032202 116907360 MODEL JAAIVD010000027;XM_032910305;XM_032910306;XM_032910307;XM_032910308 XP_032766196;XP_032766197;XP_032766198;XP_032766199 anaphase-promoting complex subunit 13 protein-coding 626102201 LOC116887664 cytosolic iron-sulfur assembly component 2A-like 18 28068371 28068746 + 116887664 MODEL JAAIVD010000013 pseudo 626102202 Mrps14 mitochondrial ribosomal protein S14 INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 38 (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog); nuclear membrane (ortholog) 10 39481734 39486914 + 22301074;30032202 116911363 MODEL JAAIVD010000005;XM_032915288 XP_032771179 28S ribosomal protein S14, mitochondrial protein-coding 626102209 Cetn1 centrin 1 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); heterotrimeric G-protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to heat (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); microtubule organizing center (ortholog) 15 34459008 34459698 + 22301074;30032202 116884842 MODEL JAAIVD010000010;XM_032886081 XP_032741972 centrin-1 protein-coding 626102214 LOC116889522 small nucleolar RNA SNORA17 X 36742681 36742818 + 116889522 MODEL JAAIVD010000014;XR_004386464 snorna 626102217 LOC116910374 elongin-B-like 9 81863626 81863958 + 22301074;30032202 116910374 MODEL JAAIVD010000002;XM_032914221 XP_032770112 protein-coding 626102220 Sdf4 stromal cell derived factor 4 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); cerebellum development (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); Golgi lumen (ortholog) 1 4643920 4660363 - 22301074;30032202 116891574 MODEL JAAIVD010000025;XM_032892757;XM_032892763 XP_032748648;XP_032748654 45 kDa calcium-binding protein protein-coding 626102236 LOC116906487 U6atac minor spliceosomal RNA 7 46342200 46342324 - 116906487 MODEL JAAIVD010000026;XR_004388730 snrna 626102239 LOC116907370 olfactory receptor 150-like 8 82244134 82245090 + 22301074;30032202 116907370 MODEL JAAIVD010000027;XM_032910321 XP_032766212 protein-coding 626102243 Rgs9bp regulator of G protein signaling 9 binding protein INVOLVED IN detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH bradyopsia (ortholog); bradyopsia 2 (ortholog); fundus dystrophy (ortholog); FOUND IN rod photoreceptor outer segment (ortholog) 2 163078313 163079430 + 30032202 116892264 MODEL JAAIVD010000001;XM_032893850 XP_032749741 regulator of G-protein signaling 9-binding protein protein-coding 626102248 Srr serine racemase ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); glycine binding (ortholog); INVOLVED IN D-serine biosynthetic process (ortholog); D-serine metabolic process (ortholog); L-serine metabolic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Experimental Liver Cirrhosis (ortholog); lung adenocarcinoma (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); neuronal cell body (ortholog) 9 93644598 93660279 - 22301074;30032202 116910544 MODEL JAAIVD010000002;XM_032914451 XP_032770342 protein-coding 626102260 LOC116894957 small nucleolar RNA SNORD35 2 154421210 154421296 + 116894957 MODEL JAAIVD010000001;XR_004387151 snorna 626102263 Cfap74 cilia and flagella associated protein 74 ASSOCIATED WITH Primary Ciliary Dyskinesia 49 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); sperm flagellum (ortholog) 1 5236950 5301253 - 116891959 MODEL JAAIVD010000025;XM_032893404 XP_032749295 cilia- and flagella-associated protein 74 protein-coding 626102306 Ghrl ghrelin and obestatin prepropeptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); ghrelin receptor binding (ortholog); growth hormone-releasing hormone activity (ortholog); INVOLVED IN actin polymerization or depolymerization (ortholog); adult feeding behavior (ortholog); decidualization (ortholog); PARTICIPATES IN ghrelin system pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); bone resorption disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 6 32814858 32818728 + 22301074;30032202 116903398 MODEL JAAIVD010000024;XM_032905909;XM_032905910 XP_032761800;XP_032761801 appetite-regulating hormone protein-coding 626102318 Dhps deoxyhypusine synthase ENCODES a protein that exhibits deoxyhypusine synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); positive regulation of T cell proliferation (ortholog); protein maturation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Seizures and Speech and Walking Impairment (ortholog); Pulmonary Arterial Hypertension (ortholog); FOUND IN cytosol (ortholog) 17 15217005 15221139 - 22301074;30032202 116886219 MODEL JAAIVD010000011;XM_032887611 XP_032743502 protein-coding 626102331 Faap24 FA core complex associated protein 24 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN interstrand cross-link repair (ortholog); FOUND IN chromatin (ortholog); FANCM-MHF complex (ortholog); Fanconi anaemia nuclear complex (ortholog) 2 163267442 163273566 + 30032202 116892267 MODEL JAAIVD010000001;XM_032893854;XM_032893855;XM_032893856 XP_032749745;XP_032749746;XP_032749747 Fanconi anemia core complex-associated protein 24 protein-coding 626102343 Tcp11l2 t-complex 11 like 2 1 163833597 163868499 - 30032202 116907473 MODEL JAAIVD010000025;XM_032910463 XP_032766354 T-complex protein 11-like protein 2 protein-coding 626102357 Tat tyrosine aminotransferase ENCODES a protein that exhibits amino acid binding (ortholog); identical protein binding (ortholog); L-tyrosine-2-oxoglutarate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); amino acid metabolic process (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH alcohol withdrawal syndrome (ortholog); genetic disease (ortholog); tyrosinemia (ortholog); FOUND IN cytosol (ortholog) 17 29691162 29701619 + 22301074 116886333 MODEL JAAIVD010000011;XM_032887786 XP_032743677 protein-coding 626102373 Kcnmb1 potassium calcium-activated channel subfamily M regulatory beta subunit 1 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); potassium channel regulator activity (ortholog); INVOLVED IN cellular response to bile acid (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Diastolic Hypertension, Resistance to (ortholog); Experimental Diabetes Mellitus (ortholog); hypertension (ortholog); FOUND IN membrane (ortholog); voltage-gated potassium channel complex (ortholog) 9 6777406 6785101 + 22301074;30032202 116910442 MODEL JAAIVD010000002;XM_032914294 XP_032770185 calcium-activated potassium channel subunit beta-1 protein-coding 626102381 LOC116898876 OX-2 membrane glycoprotein-like 4 30171090 30198012 - 22301074;30032202 116898876 MODEL JAAIVD010000003;XM_032900248 XP_032756139 protein-coding 626102390 LOC116883950 40S ribosomal protein S9-like 14 50045824 50046385 + 116883950 MODEL JAAIVD010000009 pseudo 626102391 Ypel3 yippee like 3 INVOLVED IN positive regulation of cellular senescence (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Neurodevelopmental Disorders (ortholog) 2 75116725 75119966 - 116891508 MODEL JAAIVD010000001;XM_032892642;XM_032892643;XR_004386842 XP_032748533;XP_032748534 protein yippee-like 3 protein-coding 626102408 LOC116897708 60S ribosomal protein L9-like 4 25535929 25536504 + 22301074;30032202 116897708 MODEL JAAIVD010000003;XM_032899162 XP_032755053 protein-coding 626102411 LOC116888193 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like X 122620262 122620894 + 116888193 MODEL JAAIVD010000014 pseudo 626102412 Arid4b AT-rich interaction domain 4B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN chromatin organization (ortholog); establishment of Sertoli cell barrier (ortholog); genomic imprinting (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 14 32801682 32927352 + 30032202 116883493 MODEL JAAIVD010000009;XM_032884655;XM_032884656;XM_032884657;XM_032884658;XM_032884659;XM_032884660;XR_004385765 XP_032740546;XP_032740547;XP_032740548;XP_032740549;XP_032740550;XP_032740551 AT-rich interactive domain-containing protein 4B protein-coding 626102450 LOC116889340 60S ribosomal protein L23a-like X 93047789 93048264 + 116889340 MODEL JAAIVD010000014 pseudo 626102451 LOC116894990 small nucleolar RNA SNORA30/SNORA37 family 2 74374863 74374996 - 116894990 MODEL JAAIVD010000001;XR_004387181 snorna 626102454 Bphl biphenyl hydrolase like ENCODES a protein that exhibits alpha-amino-acid esterase activity (ortholog); serine hydrolase activity (ortholog); INVOLVED IN homocysteine metabolic process (ortholog); xenobiotic metabolic process (ortholog); FOUND IN mitochondrion (ortholog) 14 52610780 52646051 + 116884060 MODEL JAAIVD010000009;XM_032885307 XP_032741198 valacyclovir hydrolase protein-coding 626102465 LOC116909263 cellular nucleic acid-binding protein-like 9 11897645 11898157 - 22301074 116909263 MODEL JAAIVD010000002;XM_032912789 XP_032768680 protein-coding 626102468 Vtcn1 V-set domain containing T cell activation inhibitor 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of T cell activation (ortholog); negative regulation of T cell proliferation (ortholog); FOUND IN external side of plasma membrane (ortholog) 3 57172636 57240038 - 116895387 MODEL JAAIVD010000012;XM_032896679 XP_032752570 V-set domain-containing T-cell activation inhibitor 1 protein-coding 626102478 Coch cochlin ENCODES a protein that exhibits collagen binding (ortholog); INVOLVED IN regulation of cell shape (ortholog); sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 9 (ortholog); autosomal recessive nonsyndromic deafness 110 (ortholog); Deafness (ortholog); FOUND IN extracellular matrix (ortholog) 7 65024516 65038763 + 116905033 MODEL JAAIVD010000026;XM_032907711;XM_032907712 XP_032763602;XP_032763603 protein-coding 626102497 Egln1 egl-9 family hypoxia inducible factor 1 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); heart trabecula formation (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); atherosclerosis (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 17 44420972 44459666 - 22301074;30032202 116886244 MODEL JAAIVD010000011;XM_032887656 XP_032743547 egl nine homolog 1 protein-coding 626102506 LOC116888762 protein FAM47E-like X 61118737 61120017 + 116888762 MODEL JAAIVD010000014;XM_032890054 XP_032745945 protein-coding 626102509 LOC116906641 uncharacterized LOC116906641 8 40505377 40505785 + 116906641 MODEL JAAIVD010000027;XR_004388757 ncrna 626102513 LOC116893732 olfactory receptor 9I1-like 2 13917714 13918664 + 22301074;30032202 116893732 MODEL JAAIVD010000001;XM_032895447 XP_032751338 protein-coding 626102516 Lgr5 leucine rich repeat containing G protein-coupled receptor 5 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN epithelial cell proliferation involved in renal tubule morphogenesis (ortholog); hair follicle development (ortholog); inner ear development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ankyloglossia (ortholog); basal cell carcinoma (ortholog); Colonic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog); trans-Golgi network membrane (ortholog) 1 193627221 193694446 - 22301074 116914682 MODEL JAAIVD010000025;XM_032919135 XP_032775026 leucine-rich repeat-containing G-protein coupled receptor 5 protein-coding 626102536 LOC116899768 U6 spliceosomal RNA 4 98642024 98642134 + 116899768 MODEL JAAIVD010000003;XR_004387782 snrna 626102539 Osbpl3 oxysterol binding protein like 3 ENCODES a protein that exhibits cholesterol binding (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); perinuclear endoplasmic reticulum (ortholog) 6 90736134 90814225 + 30032202 116903826 MODEL JAAIVD010000024;XM_032906537 XP_032762428 oxysterol-binding protein-related protein 3 protein-coding 626102565 LOC116893848 olfactory receptor 13A1-like 2 61247648 61248571 + 22301074 116893848 MODEL JAAIVD010000001;XM_032895568 XP_032751459 protein-coding 626102568 LOC116909783 olfactory receptor 2AK2-like 9 39336081 39336998 + 22301074 116909783 MODEL JAAIVD010000002;XM_032913474 XP_032769365 protein-coding 626102571 Cpxcr1 CPX chromosome region candidate 1 X 70890536 70891478 + 116887984 MODEL JAAIVD010000014;XM_032889420 XP_032745311 CPX chromosomal region candidate gene 1 protein protein-coding 626102574 Fam210a family with sequence similarity 210 member A ASSOCIATED WITH Bone Fractures (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 15 62966477 62997093 + 30032202 116885012 MODEL JAAIVD010000010;XM_032886250 XP_032742141 protein FAM210A protein-coding 626102582 Znf692 zinc finger protein 692 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of gluconeogenesis (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 9 39919650 39931028 - 30032202 116908526 MODEL JAAIVD010000002;XM_032911703;XM_032911704;XM_032911705;XM_032911706 XP_032767594;XP_032767595;XP_032767596;XP_032767597 protein-coding 626102609 Ccdc54 coiled-coil domain containing 54 4 34973485 34974477 - 116897908 MODEL JAAIVD010000003;XM_032899312 XP_032755203 coiled-coil domain-containing protein 54 protein-coding 626102612 LOC116888957 protein diaphanous homolog 2-like X 82143853 82220484 - 22301074;30032202 116888957 MODEL JAAIVD010000014;XM_032890184;XM_032890185 XP_032746075;XP_032746076 protein-coding 626102626 Dusp26 dual specificity phosphatase 26 ENCODES a protein that exhibits p53 binding (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell adhesion (ortholog); ASSOCIATED WITH lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 13 55816125 55823582 - 22301074;30032202 116914792 MODEL JAAIVD010000008;XM_032919238 XP_032775129 dual specificity protein phosphatase 26 protein-coding 626102634 LOC116901083 transmembrane protein 160-like 5 147314029 147317956 + 116901083 MODEL JAAIVD010000023 pseudo 626102635 Ipp intracisternal A particle-promoted polypeptide ASSOCIATED WITH Colorectal Neoplasms (ortholog) 1 40150242 40188256 + 22301074 116898347 MODEL JAAIVD010000025;XM_032899670;XM_032899674;XM_032899678 XP_032755561;XP_032755565;XP_032755569 actin-binding protein IPP protein-coding 626102658 Nfrkb nuclear factor related to kappaB binding protein ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 27109618 27141439 + 30032202 116906670 MODEL JAAIVD010000027;XM_032909456;XM_032909457 XP_032765347;XP_032765348 nuclear factor related to kappa-B-binding protein protein-coding 626102693 Gjb2 gap junction protein beta 2 ENCODES a protein that exhibits calcium ion binding (ortholog); gap junction channel activity (ortholog); gap junction channel activity involved in cell communication by electrical coupling (ortholog); INVOLVED IN cell-cell signaling (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autoimmune thyroiditis (ortholog); autosomal dominant keratitis-ichthyosis-deafness syndrome (ortholog); FOUND IN astrocyte projection (ortholog); cell body (ortholog); cell junction (ortholog) 12 67711529 67713728 + 22301074;2557354;30032202 116913737 MODEL JAAIVD010000007;X51615;XM_032918041 XP_032773932 gap junction beta-2 protein protein-coding 626102698 LOC116884130 U6 spliceosomal RNA 14 3878147 3878240 - 116884130 MODEL JAAIVD010000009 pseudo 626102699 Ppa2 inorganic pyrophosphatase 2 ENCODES a protein that exhibits inorganic diphosphate phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN diphosphate metabolic process (ortholog); regulation of mitochondrial membrane potential (ortholog); ASSOCIATED WITH Alcohol-Induced Sudden Cardiac Failure (ortholog); genetic disease (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); synapse (ortholog) 3 25571836 25643223 - 22301074;30032202 116896231 MODEL JAAIVD010000012;XM_032897293;XM_032897294 XP_032753184;XP_032753185 inorganic pyrophosphatase 2, mitochondrial protein-coding 626102719 Mylk2 myosin light chain kinase 2 ENCODES a protein that exhibits myosin light chain binding (ortholog); myosin light chain kinase activity (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); muscle contraction (ortholog); neuromuscular synaptic transmission (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Diabetic Cardiomyopathies (ortholog); dilated cardiomyopathy 1KK (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic spine (ortholog) 5 132229103 132239920 + 22301074;30032202 116900707 MODEL JAAIVD010000023;XM_032902409;XM_032902410 XP_032758300;XP_032758301 myosin light chain kinase 2, skeletal/cardiac muscle protein-coding 626102736 LOC116895734 60 kDa heat shock protein, mitochondrial-like 3 28279397 28282521 - 116895734 MODEL JAAIVD010000012 pseudo 626102737 LOC116899932 U2 spliceosomal RNA 4 145827869 145828059 + 116899932 MODEL JAAIVD010000003;XR_004387900 snrna 626102740 Pdha1 pyruvate dehydrogenase E1 subunit alpha 1 ENCODES a protein that exhibits pyruvate dehydrogenase (acetyl-transferring) activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; Leigh disease pathway; ASSOCIATED WITH Disease Progression (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleolus (ortholog); oxidoreductase complex (ortholog) X 32679840 32693839 + 22301074 116888276 MODEL JAAIVD010000014;XM_032889550;Z12158 CAA78146;XP_032745441 pyruvate dehydrogenase E1 alpha form 1 subunit;pyruvate dehydrogenase E1 component subunit alpha, somatic form, mitochondrial protein-coding 626102755 Trnas-gcu transfer RNA serine (anticodon GCU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41621243 41621324 + 116884206 MODEL JAAIVD010000009 trna 626102756 LOC116900813 heterogeneous nuclear ribonucleoprotein A1-like 5 31251394 31252521 - 116900813 MODEL JAAIVD010000023 pseudo 626102757 LOC116890454 small nucleolar RNA SNORD46 1 40779239 40779342 - 116890454 MODEL JAAIVD010000025;XR_004386646 snorna 626102760 LOC116904716 small nucleolar RNA SNORA17 6 15151181 15151311 + 116904716 MODEL JAAIVD010000024;XR_004388410 snorna 626102763 LOC116909519 40S ribosomal protein S19-like 1 199754568 199754996 - 116909519 MODEL JAAIVD010000025 pseudo 626102764 Rbck1 RANBP2-type and C3HC4-type zinc finger containing 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of necroptotic process (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Cardiomegaly (ortholog); genetic disease (ortholog); glycogen storage disease IV (ortholog); FOUND IN LUBAC complex (ortholog) 5 131641110 131657817 - 30032202 116902117 MODEL JAAIVD010000023;XM_032904432 XP_032760323 ranBP-type and C3HC4-type zinc finger-containing protein 1 protein-coding 626102781 Klhl5 kelch like family member 5 ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN microtubule cytoskeleton (ortholog); plasma membrane (ortholog) 11 22117559 22185358 + 22301074 116912113 MODEL JAAIVD010000006;XM_032916014;XM_032916015;XM_032916016 XP_032771905;XP_032771906;XP_032771907 kelch-like protein 5 protein-coding 626102804 LOC116898348 interferon-induced transmembrane protein 3-like 4 50828179 50828595 - 30032202 116898348 MODEL JAAIVD010000003;XM_032899667 XP_032755558 protein-coding 626102807 LOC116892741 serine/threonine-protein phosphatase PP1-beta catalytic subunit-like 2 180238311 180239555 + 116892741 MODEL JAAIVD010000001 pseudo 626102808 LOC116915186 small nucleolar RNA SNORA70 13 60861815 60861942 - 116915186 MODEL JAAIVD010000008 pseudo 626102809 Inpp4a inositol polyphosphate-4-phosphatase type I A INVOLVED IN regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH autosomal dominant dyskeratosis congenita 1 (ortholog); basal cell carcinoma (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); nuclear membrane (ortholog) 4 113498688 113612550 + 30032202 116899297 MODEL JAAIVD010000003;XM_032900945;XM_032900946;XM_032900947 XP_032756836;XP_032756837;XP_032756838 protein-coding 626102845 Ankrd39 ankyrin repeat domain 39 4 112762102 112770540 - 22301074 116899293 MODEL JAAIVD010000003;XM_032900936;XM_032900937 XP_032756827;XP_032756828 ankyrin repeat domain-containing protein 39 protein-coding 626102859 Ltb lymphotoxin beta INVOLVED IN gene expression (ortholog); lymph node development (ortholog); positive regulation of interleukin-12 production (ortholog); ASSOCIATED WITH contact dermatitis (ortholog); cutaneous leishmaniasis (ortholog); Experimental Liver Cirrhosis (ortholog) 18 7790964 7792979 + 22301074;30032202 116887038 MODEL JAAIVD010000013;XM_032888530 XP_032744421 lymphotoxin-beta protein-coding 626102866 Ubl4b ubiquitin like 4B INVOLVED IN positive regulation of protein targeting to mitochondrion (ortholog) 3 50702189 50702867 + 22301074 116895365 MODEL JAAIVD010000012;XM_032896662 XP_032752553 ubiquitin-like protein 4B protein-coding 626102870 Clic1 chloride intracellular channel 1 ENCODES a protein that exhibits chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); platelet aggregation (ortholog); positive regulation of osteoblast differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); extracellular exosome (ortholog); mitochondrial membrane (ortholog) 18 7648250 7656414 + 116887090 MODEL JAAIVD010000013;XM_032888600;XM_032888601 XP_032744491;XP_032744492 chloride intracellular channel protein 1 protein-coding 626102885 Asxl3 ASXL transcriptional regulator 3 INVOLVED IN negative regulation of lipid biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Bainbridge-Ropers syndrome (ortholog); Developmental Disabilities (ortholog) 15 21220941 21325713 - 22301074;30032202 116884998 MODEL JAAIVD010000010;XM_032886225 XP_032742116 putative Polycomb group protein ASXL3 protein-coding 626102900 C8H11orf71 chromosome 8 C11orf71 homolog 8 42996648 42997940 + 30032202 116906872 MODEL JAAIVD010000027;XM_032909784 XP_032765675 uncharacterized protein C11orf71 homolog protein-coding 626102905 LOC116886973 mitochondrial import inner membrane translocase subunit Tim21-like 18 38236153 38241757 - 116886973 MODEL JAAIVD010000013 pseudo 626102906 LOC116899937 U2 spliceosomal RNA 4 133952698 133952885 + 116899937 MODEL JAAIVD010000003;XR_004387904 snrna 626102909 Ankrd23 ankyrin repeat domain 23 ENCODES a protein that exhibits titin binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); regulation of sarcomere organization (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); diastolic heart failure (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); I band (ortholog) 4 112753414 112758765 - 22301074;30032202 116898474 MODEL JAAIVD010000003;XM_032899723 XP_032755614 ankyrin repeat domain-containing protein 23 protein-coding 626102921 Ascl1 achaete-scute family bHLH transcription factor 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); carotid body glomus cell differentiation (ortholog); cell maturation (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Hyperplasia (ortholog); intellectual disability (ortholog); FOUND IN neuronal cell body (ortholog); nucleus (ortholog) 1 166595577 166596878 - 22301074;30032202 116889974 MODEL JAAIVD010000025;XM_032890768 XP_032746659 achaete-scute homolog 1 protein-coding 626102926 LOC116904874 heterogeneous nuclear ribonucleoprotein A3-like 7 29313324 29314362 + 116904874 MODEL JAAIVD010000026 pseudo 626102927 LOC116887014 60S ribosomal protein L36-like 18 3996273 3996625 - 22301074;30032202 116887014 MODEL JAAIVD010000013;XM_032888502 XP_032744393 protein-coding 626102932 Pip5k1c phosphatidylinositol-4-phosphate 5-kinase type 1 gamma ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); talin binding (ortholog); INVOLVED IN axonogenesis (ortholog); phosphatidylinositol biosynthetic process (ortholog); phosphatidylinositol metabolic process (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; E-cadherin signaling pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH genetic disease (ortholog); lethal congenital contracture syndrome 3 (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); endosome membrane (ortholog); glutamatergic synapse (ortholog) 1 153571882 153598746 - 22301074 116904420 MODEL JAAIVD010000025;XM_032907262 XP_032763153 phosphatidylinositol 4-phosphate 5-kinase type-1 gamma protein-coding 626102955 LOC116913157 40S ribosomal protein S24-like 12 44917493 44917924 + 22301074;30032202 116913157 MODEL JAAIVD010000007;XM_032917366 XP_032773257 protein-coding 626102959 LOC116905006 translation machinery-associated protein 16-like 7 77071497 77072144 + 116905006 MODEL JAAIVD010000026 pseudo 626102960 Entpd8 ectonucleoside triphosphate diphosphohydrolase 8 ENCODES a protein that exhibits apyrase activity (ortholog); nucleoside diphosphate phosphatase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN nucleoside diphosphate biosynthetic process (ortholog); nucleoside monophosphate biosynthetic process (ortholog); ribonucleoside diphosphate catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN membrane (ortholog) 5 12099047 12105939 - 30032202 116901322 MODEL JAAIVD010000023;XM_032903135;XM_032903136;XM_032903137 XP_032759026;XP_032759027;XP_032759028 protein-coding 626102983 LOC116910563 60S ribosomal protein L21-like 9 78442317 78442796 - 116910563 MODEL JAAIVD010000002 pseudo 626102984 Odr4 odr-4 GPCR localization factor homolog 10 29803934 29838049 - 30032202 116911515 MODEL JAAIVD010000005;XM_032915504;XM_032915505;XM_032915506;XM_032915508;XM_032915509 XP_032771395;XP_032771396;XP_032771397;XP_032771399;XP_032771400 protein odr-4 homolog protein-coding 626103014 Rfwd3 ring finger and WD repeat domain 3 ENCODES a protein that exhibits MDM2/MDM4 family protein binding (ortholog); p53 binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); interstrand cross-link repair (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); Fanconi anemia complementation group W (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); site of DNA damage (ortholog) 17 30967881 31000388 - 22301074;30032202 116886294 MODEL JAAIVD010000011;XM_032887729;XM_032887730 XP_032743620;XP_032743621 E3 ubiquitin-protein ligase RFWD3 protein-coding 626103033 Pik3ap1 phosphoinositide-3-kinase adaptor protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); INVOLVED IN negative regulation of toll-like receptor signaling pathway (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); positive regulation of toll-like receptor signaling pathway (ortholog); ASSOCIATED WITH myoclonic-atonic epilepsy (ortholog); West syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 40393823 40514120 - 22301074;30032202 116893069 MODEL JAAIVD010000001;XM_032895027 XP_032750918 phosphoinositide 3-kinase adapter protein 1 protein-coding 626103056 Psmb2 proteasome 20S subunit beta 2 ASSOCIATED WITH COVID-19 (ortholog); urinary bladder cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 31590167 31621538 - 22301074;30032202 116896577 MODEL JAAIVD010000025;XM_032897801 XP_032753692 proteasome subunit beta type-2 protein-coding 626103066 LOC116913908 uncharacterized LOC116913908 12 92617464 92814407 + 116913908 MODEL JAAIVD010000007;XR_004389646 ncrna 626103070 S100z S100 calcium binding protein Z ENCODES a protein that exhibits calcium ion binding (ortholog); protein homodimerization activity (ortholog) 3 222734531 222736626 + 22301074;30032202 116895722 MODEL JAAIVD010000012;XM_032896905 XP_032752796 protein S100-Z protein-coding 626103076 LOC116893671 olfactory receptor 4D10-like 2 12187817 12188755 - 22301074 116893671 MODEL JAAIVD010000001;XM_032895387 XP_032751278 protein-coding 626103080 LOC116900039 60S ribosomal protein L39-like 5 1965702 1965939 + 22301074;30032202 116900039 MODEL JAAIVD010000023;XM_032901834 XP_032757725 protein-coding 626103085 LOC116915036 sperm motility kinase 13 58979343 58981334 + 22301074;30032202 116915036 MODEL JAAIVD010000008;XM_032919442 XP_032775333 protein-coding 626103089 Eif2ak3 eukaryotic translation initiation factor 2 alpha kinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone mineralization (ortholog); calcium-mediated signaling (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute-On-Chronic Liver Failure (ortholog); Chronic Hepatitis B (ortholog); connective tissue disease (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 73831835 73892905 + 22301074;30032202 116903676 MODEL JAAIVD010000024;XM_032906335 XP_032762226 eukaryotic translation initiation factor 2-alpha kinase 3 protein-coding 626103110 Kremen1 kringle containing transmembrane protein 1 INVOLVED IN apoptotic process (ortholog); limb development (ortholog); negative regulation of axon regeneration (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ectodermal dysplasia 13 (ortholog); genetic disease (ortholog); FOUND IN neuronal cell body (ortholog) 11 74164607 74227098 - 22301074;30032202 116912541 MODEL JAAIVD010000006;XM_032916643 XP_032772534 kremen protein 1 protein-coding 626103123 Ctsc cathepsin C ENCODES a protein that exhibits chloride ion binding (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of myelination (ortholog); positive regulation of apoptotic signaling pathway (ortholog); positive regulation of microglial cell activation (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); allergic contact dermatitis (ortholog); brain ischemia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); lysosome (ortholog) 2 112974483 113006535 - 30032202 116891866 MODEL JAAIVD010000001;XM_032893266 XP_032749157 dipeptidyl peptidase 1 protein-coding 626103134 Ptges prostaglandin E synthase ENCODES a protein that exhibits glutathione binding (ortholog); glutathione peroxidase activity (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular response to resveratrol (ortholog); chronic inflammatory response (ortholog); cyclooxygenase pathway (ortholog); PARTICIPATES IN acetylsalicylic acid pharmacodynamics pathway; antipyrine drug pathway; arachidonic acid metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 5 4719217 4730607 + 22301074;30032202 116900053 MODEL JAAIVD010000023;XM_032901846 XP_032757737 protein-coding 626103141 Ggt7 gamma-glutamyltransferase 7 INVOLVED IN negative regulation of response to oxidative stress (ortholog); FOUND IN plasma membrane (ortholog) 5 134825845 134849095 - 30032202 116902179 MODEL JAAIVD010000023;XM_032904533;XM_032904534;XM_032904535 XP_032760424;XP_032760425;XP_032760426 glutathione hydrolase 7 protein-coding 626103165 LOC116906365 small nucleolar RNA SNORD113/SNORD114 family 7 127243656 127243730 + 116906365 MODEL JAAIVD010000026;XR_004388634 snorna 626103168 Znf319 zinc finger protein 319 FOUND IN nucleus (ortholog) 17 2187457 2193229 - 116886117 MODEL JAAIVD010000011;XM_032887455 XP_032743346 protein-coding 626103174 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 12 72249770 72249841 + 116914218 MODEL JAAIVD010000007 trna 626103175 Pon2 paraoxonase 2 ENCODES a protein that exhibits acyl-L-homoserine-lactone lactonohydrolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN lactone catabolic process (ortholog); response to oxidative stress (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN plasma membrane (ortholog) 6 133292435 133331484 + 22301074 116904098 MODEL JAAIVD010000024;XM_032906967 XP_032762858 serum paraoxonase/arylesterase 2 protein-coding 626103188 Slc39a2 solute carrier family 39 member 2 ENCODES a protein that exhibits metal ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); keratinocyte differentiation (ortholog); zinc ion transmembrane transport (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 12 72001212 72003326 - 30032202 116913927 MODEL JAAIVD010000007;XM_032918194 XP_032774085 zinc transporter ZIP2 protein-coding 626103196 LOC116888886 E3 ubiquitin-protein ligase Midline-1-like X 27192110 27367912 + 22301074;30032202 116888886 MODEL JAAIVD010000014;XM_032890146;XM_032890148;XM_032890149 XP_032746037;XP_032746039;XP_032746040 protein-coding 626103209 Tox4 TOX high mobility group box family member 4 INVOLVED IN positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of transcription elongation by RNA polymerase II (ortholog); RNA polymerase II promoter clearance (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); PTW/PP1 phosphatase complex (ortholog) 12 71599614 71612886 - 30032202 116913943 MODEL JAAIVD010000007;XM_032918208 XP_032774099 protein-coding 626103222 LOC116907205 zinc finger protein 564-like 8 18415461 18418670 + 30032202 116907205 MODEL JAAIVD010000027;XM_032910164 XP_032766055 protein-coding 626103229 Adam2 ADAM metallopeptidase domain 2 INVOLVED IN adult behavior (ortholog); cell adhesion (ortholog); gene expression (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN acrosomal vesicle (ortholog); cell surface (ortholog); protein-containing complex (ortholog) 12 58383495 58422475 + 22301074;30032202 116913646 MODEL JAAIVD010000007;XM_032917915 XP_032773806 disintegrin and metalloproteinase domain-containing protein 2 protein-coding 626103253 LOC116885830 interferon-induced transmembrane protein 1-like 16 23703938 23704139 + 116885830 MODEL JAAIVD010000004 pseudo 626103254 LOC116891094 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial-like 1 51025180 51028876 + 116891094 MODEL JAAIVD010000025 pseudo 626103255 LOC116913608 olfactory receptor 4K15-like 12 73125266 73126240 + 22301074 116913608 MODEL JAAIVD010000007;XM_032917860 XP_032773751 protein-coding 626103259 LOC116907522 transmembrane protein 92-like 1 165039683 165040550 + 116907522 MODEL JAAIVD010000025 pseudo 626103260 Rilp Rab interacting lysosomal protein ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); small GTPase binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); endosome transport via multivesicular body sorting pathway (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog); protein-containing complex (ortholog) 9 94225378 94228486 + 22301074;30032202 116909446 MODEL JAAIVD010000002;XM_032913024 XP_032768915 rab-interacting lysosomal protein protein-coding 626103272 LOC116906112 methyltransferase-like protein 5 7 80147524 80148833 - 116906112 MODEL JAAIVD010000026 pseudo 626103273 Pank3 pantothenate kinase 3 ENCODES a protein that exhibits acetyl-CoA binding (ortholog); ATP binding (ortholog); pantothenate kinase activity (ortholog); INVOLVED IN coenzyme A biosynthetic process (ortholog); phosphorylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 9 18949743 18971135 + 22301074;30032202 116908496 MODEL JAAIVD010000002;XM_032911653 XP_032767544 protein-coding 626103284 Kcnn2 potassium calcium-activated channel subfamily N member 2 ENCODES a protein that exhibits alpha-actinin binding (ortholog); calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN membrane repolarization during atrial cardiac muscle cell action potential (ortholog); modulation of chemical synaptic transmission (ortholog); monoatomic ion transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); atrial fibrillation (ortholog); cardiac arrest (ortholog); FOUND IN cell surface (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 15 41073532 41222298 - 22301074;30032202 116884668 MODEL JAAIVD010000010;XM_032885840;XM_032885841;XM_032885842;XM_032885843;XM_032885844 XP_032741731;XP_032741732;XP_032741733;XP_032741734;XP_032741735 small conductance calcium-activated potassium channel protein 2 protein-coding 626103312 Spesp1 sperm equatorial segment protein 1 INVOLVED IN acrosome reaction (ortholog); fertilization (ortholog); fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); FOUND IN acrosomal vesicle (ortholog); intercellular bridge (ortholog); microtubule cytoskeleton (ortholog) 8 56570620 56584959 - 22301074;30032202 116908033 MODEL JAAIVD010000027;XM_032911301;XM_032911302 XP_032767192;XP_032767193 protein-coding 626103323 Armcx5 armadillo repeat containing X-linked 5 X 87764103 87767761 - 116888852 MODEL JAAIVD010000014;XM_032890121 XP_032746012 armadillo repeat-containing X-linked protein 5 protein-coding 626103330 Tmem154 transmembrane protein 154 3 68906638 68945896 - 116895810 MODEL JAAIVD010000012;XM_032896946 XP_032752837 protein-coding 626103339 LOC116897929 olfactory receptor Olfr180-like 4 42798749 42799708 - 22301074;30032202 116897929 MODEL JAAIVD010000003;XM_032899329 XP_032755220 protein-coding 626103342 LOC116910465 non-histone chromosomal protein HMG-17-like 9 17131560 17132770 + 116910465 MODEL JAAIVD010000002 pseudo 626103343 LOC116912190 zinc finger protein 54-like 11 96705201 96716446 - 22301074;30032202 116912190 MODEL JAAIVD010000006;XM_032916125 XP_032772016 protein-coding 626103351 Nedd9 neural precursor cell expressed, developmentally down-regulated 9 ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN cilium disassembly (ortholog); learning or memory (ortholog); lymphocyte migration into lymphoid organs (ortholog); ASSOCIATED WITH multiple sclerosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 14 60293021 60408883 - 22301074;30032202 116883285 MODEL JAAIVD010000009;XM_032884279;XM_032884280 XP_032740170;XP_032740171 enhancer of filamentation 1 protein-coding 626103365 Golga4 golgin A4 ENCODES a protein that exhibits GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); positive regulation of axon extension (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); Prostatic Neoplasms (ortholog); skin disease (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 8 109738825 109818370 + 30032202 116907891 MODEL JAAIVD010000027;XM_032911082;XM_032911084;XM_032911085;XM_032911086;XM_032911087;XM_032911088;XM_032911089 XP_032766973;XP_032766975;XP_032766976;XP_032766977;XP_032766978;XP_032766979;XP_032766980 golgin subfamily A member 4 protein-coding 626103406 Sfn stratifin ENCODES a protein that exhibits identical protein binding (ortholog); phosphoprotein binding (ortholog); phosphoserine residue binding (ortholog); INVOLVED IN cAMP/PKA signal transduction (ortholog); cytolysis in another organism (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; mTOR signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH endometrial carcinoma (ortholog); Esophageal Neoplasms (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 1 24630250 24631661 + 30032202 116895097 MODEL JAAIVD010000025;XM_032896518 XP_032752409 14-3-3 protein sigma protein-coding 626103411 Aar2 AAR2 splicing factor PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Developmental Disabilities (ortholog) 5 135895181 135917347 + 30032202 116902206 MODEL JAAIVD010000023;XM_032904596;XM_032904597 XP_032760487;XP_032760488 protein AAR2 homolog protein-coding 626103423 LOC116909430 cytochrome b-c1 complex subunit 10-like 9 34900689 34901026 + 22301074;30032202 116909430 MODEL JAAIVD010000002;XM_032913006 XP_032768897 protein-coding 626103428 LOC116888034 high mobility group protein B4-like X 84150752 84154183 - 116888034 MODEL JAAIVD010000014 pseudo 626103429 Tial1 TIA1 cytotoxic granule associated RNA binding protein like 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); protein-RNA adaptor activity (ortholog); INVOLVED IN germ cell development (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of hippo signaling (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Disease Progression (ortholog); Experimental Liver Cirrhosis (ortholog); malignant astrocytoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 2 73489946 73513188 + 22301074;30032202 116891433 MODEL JAAIVD010000001;XM_032892489;XM_032892490;XM_032892491;XM_032892492;XM_032892493;XM_032892494;XM_032892495;XR_004386833;XR_004386834 XP_032748380;XP_032748381;XP_032748382;XP_032748383;XP_032748384;XP_032748385;XP_032748386 nucleolysin TIAR protein-coding 626103474 Nudt8 nudix hydrolase 8 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); butyryl-CoA catabolic process (ortholog); coenzyme A catabolic process (ortholog); FOUND IN mitochondrion (ortholog) 2 3635399 3637130 - 22301074;30032202 116890796 MODEL JAAIVD010000001;XM_032891273;XM_032891274 XP_032747164;XP_032747165 nucleoside diphosphate-linked moiety X motif 8 protein-coding 626103484 Ccdc28b coiled-coil domain containing 28B INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN centrosome (ortholog) 1 28525484 28530246 + 116896079 MODEL JAAIVD010000025;XM_032897060 XP_032752951 coiled-coil domain-containing protein 28B protein-coding 626103493 Daw1 dynein assembly factor with WD repeats 1 INVOLVED IN cerebrospinal fluid circulation (ortholog); determination of left/right symmetry (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); ASSOCIATED WITH Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); Primary Ciliary Dyskinesia 52 (ortholog) 4 155998423 156041536 + 22301074 116898245 MODEL JAAIVD010000003;XM_032899595 XP_032755486 dynein assembly factor with WDR repeat domains 1 protein-coding 626103510 LOC116898643 translation machinery-associated protein 16-like 4 2798727 2799377 - 116898643 MODEL JAAIVD010000003 pseudo 626103511 Snx9 sorting nexin 9 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); Arp2/3 complex binding (ortholog); identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); FOUND IN clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog); cuticular plate (ortholog) 2 192886221 192965048 - 22301074;30032202 116892857 MODEL JAAIVD010000001;XM_032894751 XP_032750642 sorting nexin-9 protein-coding 626103533 Pkia cAMP-dependent protein kinase inhibitor alpha ENCODES a protein that exhibits cAMP-dependent protein kinase inhibitor activity (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN negative regulation of cAMP-dependent protein kinase activity (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); negative regulation of protein import into nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 3 141611872 141692786 + 22301074;30032202 116897021 MODEL JAAIVD010000012;XM_032898628;XM_032898629;XM_032898630;XM_032898632 XP_032754519;XP_032754520;XP_032754521;XP_032754523 protein-coding 626103549 Trnar-ccg transfer RNA arginine (anticodon CCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 72122062 72122134 - 116910788 MODEL JAAIVD010000002 trna 626103550 LOC116892884 breast cancer metastasis-suppressor 1 homolog 2 198717068 198717836 - 116892884 MODEL JAAIVD010000001 pseudo 626103551 LOC116913584 MOB kinase activator 2-like 12 69027681 69029140 - 30032202 116913584 MODEL JAAIVD010000007;XM_032917812 XP_032773703 protein-coding 626103557 LOC116896093 60S ribosomal protein L6-like 3 218920390 218922726 + 116896093 MODEL JAAIVD010000012 pseudo 626103558 Dmwd DM1 locus, WD repeat containing ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 171541779 171548326 - 22301074 116892553 MODEL JAAIVD010000001;XM_032894328;XM_032894330 XP_032750219;XP_032750221 dystrophia myotonica WD repeat-containing protein protein-coding 626103568 LOC116896115 small proline-rich protein 2I-like 3 773728 773973 + 22301074 116896115 MODEL JAAIVD010000012;XM_032897079 XP_032752970 protein-coding 626103571 Slc39a4 solute carrier family 39 member 4 ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); zinc ion binding (ortholog); INVOLVED IN cellular response to zinc ion starvation (ortholog); intracellular zinc ion homeostasis (ortholog); zinc ion transmembrane transport (ortholog); ASSOCIATED WITH acrodermatitis (ortholog); acrodermatitis enteropathica (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasmic vesicle (ortholog); endosome (ortholog) 1 248941306 248945543 - 22301074;30032202 116913297 MODEL JAAIVD010000025;XM_032917428 XP_032773319 zinc transporter ZIP4 protein-coding 626103587 LOC116907582 thymosin beta-4-like 8 59066430 59066600 + 22301074;30032202 116907582 MODEL JAAIVD010000027;XM_032910621 XP_032766512 protein-coding 626103591 LOC116895877 uncharacterized LOC116895877 3 106447174 106500148 + 22301074;30032202 116895877 MODEL JAAIVD010000012;XM_032896974 XP_032752865 uncharacterized protein LOC116895877 protein-coding 626103619 LOC116889784 RNA-binding protein with serine-rich domain 1-like 116889784 MODEL JAAIVD010000329 pseudo 626103620 Slc25a36 solute carrier family 25 member 36 ENCODES a protein that exhibits pyrimidine nucleotide transmembrane transporter activity (ortholog); INVOLVED IN mitochondrion organization (ortholog); obsolete mitochondrial genome maintenance (ortholog); pyrimidine nucleotide transport (ortholog); ASSOCIATED WITH familial hyperinsulinemic hypoglycemia 8 (ortholog); FOUND IN mitochondrion (ortholog) 8 88514018 88546173 - 30032202 116907091 MODEL JAAIVD010000027;XM_032910054;XM_032910055 XP_032765945;XP_032765946 protein-coding 626103634 Tmem64 transmembrane protein 64 INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of osteoblast differentiation (ortholog); positive regulation of bone resorption (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 128486855 128507629 - 116903188 MODEL JAAIVD010000025;XM_032905566 XP_032761457 protein-coding 626103641 LOC116884277 protocadherin 18-like 15 6739497 6741912 + 116884277 MODEL JAAIVD010000010;XM_032885360 XP_032741251 protein-coding 626103647 LOC116912399 60S ribosomal protein L17-like 11 7051780 7052205 + 116912399 MODEL JAAIVD010000006 pseudo 626103648 Prr29 proline rich 29 9 72745789 72748837 - 116909953 MODEL JAAIVD010000002;XM_032913728 XP_032769619 proline-rich protein 29 protein-coding 626103658 LOC116890936 uncharacterized LOC116890936 2 9205904 9208734 + 116890936 MODEL JAAIVD010000001;XR_004386795 ncrna 626103662 Evi5 ecotropic viral integration site 5 ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN positive regulation of GTPase activity (ortholog); regulation of cilium assembly (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN cytosol (ortholog) 11 17519064 17676766 - 116912827 MODEL JAAIVD010000006;XM_032917011;XM_032917012;XM_032917013;XM_032917014;XM_032917015;XM_032917016;XR_004389481 XP_032772902;XP_032772903;XP_032772904;XP_032772905;XP_032772906;XP_032772907 ecotropic viral integration site 5 protein homolog protein-coding 626103703 Ephx4 epoxide hydrolase 4 11 17170481 17200196 + 30032202 116912484 MODEL JAAIVD010000006;XM_032916551 XP_032772442 protein-coding 626103714 LOC116911140 histone H3.3A ENCODES a protein that exhibits nucleosomal DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); INVOLVED IN nucleosome assembly (ortholog); positive regulation of cell growth (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH bone giant cell tumor (ortholog); Bryant-Li-Bhoj neurodevelopmental syndrome 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog); nucleosome (ortholog) 10 59123706 59135144 - 22301074;30032202 116911140 MODEL JAAIVD010000005;XM_032914992 XP_032770883 protein-coding 626103722 Stox2 storkhead box 2 INVOLVED IN embryo development ending in birth or egg hatching (ortholog); maternal placenta development (ortholog); response to bacterium (ortholog) 13 40612864 40843718 + 30032202 116914514 MODEL JAAIVD010000008;XM_032918839;XM_032918840;XM_032918842;XM_032918843;XM_032918844;XM_032918845 XP_032774730;XP_032774731;XP_032774733;XP_032774734;XP_032774735;XP_032774736 storkhead-box protein 2 protein-coding 626103746 Tpm4 tropomyosin 4 ENCODES a protein that exhibits actin filament binding (ortholog); identical protein binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN platelet formation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asbestosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical cytoskeleton (ortholog); cytoplasm (ortholog) 13 13972233 13987837 + 30032202 116914482 MODEL JAAIVD010000008;XM_032918793 XP_032774684 tropomyosin alpha-4 chain protein-coding 626103758 LOC116884126 U6 spliceosomal RNA 14 35360309 35360404 + 116884126 MODEL JAAIVD010000009 pseudo 626103759 Cybb cytochrome b-245 beta chain ENCODES a protein that exhibits electron transfer activity (ortholog); FAD binding (ortholog); flavin adenine dinucleotide binding (ortholog); INVOLVED IN cellular response to cadmium ion (ortholog); cellular response to ethanol (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH Binge Drinking (ortholog); brain infarction (ortholog); chronic granulomatous disease (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); NADPH oxidase complex (ortholog) X 14112135 14144953 + 30032202 116889176 MODEL JAAIVD010000014;XM_032890341 XP_032746232 cytochrome b-245 heavy chain protein-coding 626103776 LOC116900824 60S ribosomal protein L27a-like 5 42757925 42758349 - 116900824 MODEL JAAIVD010000023 pseudo 626103777 Nusap1 nucleolar and spindle associated protein 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN establishment of mitotic spindle localization (ortholog); mitotic chromosome condensation (ortholog); mitotic cytokinesis (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); hepatocellular carcinoma (ortholog); microcephaly, seizures, and developmental delay (ortholog); FOUND IN mitotic spindle (ortholog); nucleolus (ortholog) 5 97789843 97820266 + 22301074;30032202 116901813 MODEL JAAIVD010000023;XM_032903973 XP_032759864 nucleolar and spindle-associated protein 1 protein-coding 626103792 Yipf6 Yip1 domain family member 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN intestinal epithelial cell development (ortholog); FOUND IN cis-Golgi network (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog) X 56929235 56943065 + 22301074;30032202 116888491 MODEL JAAIVD010000014;XM_032889763 XP_032745654 protein YIPF6 protein-coding 626103803 Sap130 Sin3A associated protein 130 INVOLVED IN embryonic placenta development (ortholog); in utero embryonic development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); hypoplastic left heart syndrome (ortholog); FOUND IN nuclear speck (ortholog) 15 12517861 12593408 - 30032202 116884263 MODEL JAAIVD010000010;XM_032885348 XP_032741239 histone deacetylase complex subunit SAP130 protein-coding 626103828 LOC116893121 eukaryotic translation initiation factor 1-like 2 74495037 74495466 - 116893121 MODEL JAAIVD010000001 pseudo 626103829 Ceacam16 CEA cell adhesion molecule 16, tectorial membrane component ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 4A (ortholog); autosomal dominant nonsyndromic deafness 4B (ortholog); autosomal recessive nonsyndromic deafness 113 (ortholog); FOUND IN extracellular space (ortholog); stereocilium tip (ortholog) 2 170750189 170759752 + 116892510 MODEL JAAIVD010000001;XM_032894265 XP_032750156 carcinoembryonic antigen-related cell adhesion molecule 16 protein-coding 626103839 LOC116900145 olfactory receptor 1G1-like 5 14879411 14880334 + 22301074 116900145 MODEL JAAIVD010000023;XM_032901919 XP_032757810 protein-coding 626103843 LOC116887974 ribosomal protein S6 kinase alpha-6-like X 67619858 67668729 + 22301074;30032202 116887974 MODEL JAAIVD010000014;XM_032889413 XP_032745304 protein-coding 626103867 Klhl35 kelch like family member 35 2 97739082 97745001 + 22301074 116891724 MODEL JAAIVD010000001;XM_032893017;XM_032893018 XP_032748908;XP_032748909 kelch-like protein 35 protein-coding 626103881 Rsph3 radial spoke head 3 ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 32 (ortholog); FOUND IN cilium (ortholog) 2 192232601 192287594 + 30032202 116892845 MODEL JAAIVD010000001;XM_032894734;XM_032894735 XP_032750625;XP_032750626 radial spoke head protein 3 homolog protein-coding 626103899 Senp6 SUMO specific peptidase 6 ENCODES a protein that exhibits SUMO-specific endopeptidase activity (ortholog); INVOLVED IN protein desumoylation (ortholog); protein modification by small protein removal (ortholog); regulation of kinetochore assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); postsynaptic cytosol (ortholog) 8 74299601 74375752 + 30032202 116906550 MODEL JAAIVD010000027;XM_032909260;XM_032909261;XM_032909262;XM_032909263 XP_032765151;XP_032765152;XP_032765153;XP_032765154 sentrin-specific protease 6 protein-coding 626103937 LOC116890627 U2 spliceosomal RNA 1 169228514 169228701 + 116890627 MODEL JAAIVD010000025;XR_004386772 snrna 626103940 LOC116883684 60S ribosomal protein L23a-like 14 2914139 2915802 + 116883684 MODEL JAAIVD010000009 pseudo 626103941 Arhgef25 Rho guanine nucleotide exchange factor 25 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN myofibril (ortholog); plasma membrane (ortholog) 1 205618705 205625758 - 22301074;30032202 116909875 MODEL JAAIVD010000025;XM_032913616;XM_032913622 XP_032769507;XP_032769513 protein-coding 626103964 Gps2 G protein pathway suppressor 2 ENCODES a protein that exhibits cyclin binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 49523431 49526096 + 30032202 116908504 MODEL JAAIVD010000002;XM_032911676;XM_032911677 XP_032767567;XP_032767568 protein-coding 626103984 Muc1 mucin 1, cell surface associated ENCODES a protein that exhibits p53 binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); epithelial cell differentiation (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); allergic conjunctivitis (ortholog); allergic rhinitis (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); chromatin (ortholog) 3 64443492 64447959 - 30032202 116896659 MODEL JAAIVD010000012;XM_032897995 XP_032753886 mucin-1 protein-coding 626103995 Oaf out at first homolog 8 37796524 37814672 - 116907399 MODEL JAAIVD010000027;XM_032910352 XP_032766243 out at first protein homolog protein-coding 626104003 Tmem129 transmembrane protein 129, E3 ubiquitin ligase ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); protein polyubiquitination (ortholog); retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 71182658 71187498 + 22301074;30032202 116912345 MODEL JAAIVD010000006;XM_032916395;XM_032916396;XM_032916397 XP_032772286;XP_032772287;XP_032772288 E3 ubiquitin-protein ligase TM129 protein-coding 626104017 LOC116901631 high mobility group protein B1-like 5 66003889 66004518 - 116901631 MODEL JAAIVD010000023 pseudo 626104018 Ppp1r9b protein phosphatase 1 regulatory subunit 9B ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); D2 dopamine receptor binding (ortholog); INVOLVED IN actin filament depolymerization (ortholog); actin filament organization (ortholog); calcium-mediated signaling (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cognitive Dysfunction (ortholog); Colorectal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) 9 59375111 59391102 - 30032202 116908624 MODEL JAAIVD010000002;XM_032911876 XP_032767767 neurabin-2 protein-coding 626104032 LOC116905560 KICSTOR complex protein C12orf66 homolog 7 51849508 51857038 + 116905560 MODEL JAAIVD010000026 pseudo 626104033 Xrcc1 X-ray repair cross complementing 1 ENCODES a protein that exhibits 3' overhang single-stranded DNA endodeoxyribonuclease activity (ortholog); ADP-D-ribose modification-dependent protein binding (ortholog); enzyme binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN base excision repair pathway; nucleotide excision repair pathway; ASSOCIATED WITH 5 Alpha Fluorouracil Toxicity (ortholog); asphyxia neonatorum (ortholog); autosomal recessive spinocerebellar ataxia 26 (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) 2 170138668 170165388 - 22301074;30032202 116892485 MODEL JAAIVD010000001;XM_032894214 XP_032750105 DNA repair protein XRCC1 protein-coding 626104054 R3hdm4 R3H domain containing 4 1 154958671 154965725 + 22301074 116905510 MODEL JAAIVD010000025;XM_032908535 XP_032764426 R3H domain-containing protein 4 protein-coding 626104066 Ppa1 inorganic pyrophosphatase 1 ENCODES a protein that exhibits pyrophosphatase activity (ortholog) 18 27470238 27493500 + 22301074;30032202 116887662 MODEL JAAIVD010000013;XM_032889261 XP_032745152 inorganic pyrophosphatase protein-coding 626104079 LOC116889441 U6 spliceosomal RNA X 66574809 66574915 - 116889441 MODEL JAAIVD010000014;XR_004386403 snrna 626104082 LOC116907993 uncharacterized LOC116907993 8 49276691 49285045 - 116907993 MODEL JAAIVD010000027;XR_004388866 ncrna 626104086 Sh2d3a SH2 domain containing 3A 4 88670655 88675394 - 22301074;30032202 116898419 MODEL JAAIVD010000003;XM_032899700 XP_032755591 SH2 domain-containing protein 3A protein-coding 626104094 Mfsd6 major facilitator superfamily domain containing 6 ENCODES a protein that exhibits MHC class I protein binding (ortholog); MHC class I receptor activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); FOUND IN plasma membrane (ortholog) 4 122592378 122716160 + 30032202 116899369 MODEL JAAIVD010000003;XM_032901080;XM_032901081 XP_032756971;XP_032756972 major facilitator superfamily domain-containing protein 6 protein-coding 626104110 LOC116912954 small nucleolar RNA SNORA57 11 5025418 5025558 + 116912954 MODEL JAAIVD010000006;XR_004389521 snorna 626104113 Pgls 6-phosphogluconolactonase ENCODES a protein that exhibits 6-phosphogluconolactonase activity (ortholog); monosaccharide binding (ortholog); INVOLVED IN pentose-phosphate shunt (ortholog); pentose-phosphate shunt, oxidative branch (ortholog); PARTICIPATES IN pentose phosphate pathway; pentose phosphate pathway - oxidative phase; ribose 5-phosphate isomerase deficiency pathway; ASSOCIATED WITH osteoporosis (ortholog) 13 13369016 13373593 - 22301074 116914694 MODEL JAAIVD010000008;XM_032919114 XP_032775005 protein-coding 626104122 Abca9 ATP binding cassette subfamily A member 9 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 9 79136132 79198804 + 22301074;30032202 116908865 MODEL JAAIVD010000002;XM_032912305 XP_032768196 ATP-binding cassette sub-family A member 9 protein-coding 626104163 LOC116893284 ataxin-1-like 2 147824429 147831813 + 116893284 MODEL JAAIVD010000001 pseudo 626104164 LOC116895860 serine/arginine-rich SC35-like splicing factor SCL28 3 93732847 93784715 + 116895860 MODEL JAAIVD010000012 pseudo 626104165 LOC116894034 olfactory receptor 51G2-like 2 102106971 102107924 - 22301074 116894034 MODEL JAAIVD010000001;XM_032895753 XP_032751644 protein-coding 626104168 Pla1a phospholipase A1 member A ENCODES a protein that exhibits phospholipase A1 activity (ortholog); FOUND IN acrosomal membrane (ortholog) 4 23347479 23384350 - 22301074;30032202 116898842 MODEL JAAIVD010000003;XM_032900197 XP_032756088 protein-coding 626104183 LOC116893571 retinoic acid early-inducible protein 1-alpha-like 2 222023976 222028526 - 30032202 116893571 MODEL JAAIVD010000001;XM_032895278 XP_032751169 protein-coding 626104190 LOC116883570 histone H2B type 1-C/E/F/G/I 14 42557282 42557729 - 22301074;30032202 116883570 MODEL JAAIVD010000009;XM_032884752 XP_032740643 protein-coding 626104195 Fam222a family with sequence similarity 222 member A 16 39339384 39384342 - 116885477 MODEL JAAIVD010000004;XM_032886763;XM_032886764;XM_032886765;XM_032886766 XP_032742654;XP_032742655;XP_032742656;XP_032742657 protein FAM222A protein-coding 626104211 LOC116892795 zinc finger protein 501-like 2 186022467 186057797 - 22301074 116892795 MODEL JAAIVD010000001;XM_032894668 XP_032750559 protein-coding 626104219 LOC116901033 ribonuclease T2-A-like 5 130118923 130119543 - 116901033 MODEL JAAIVD010000023 pseudo 626104220 Atic 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase ENCODES a protein that exhibits IMP cyclohydrolase activity (ortholog); phosphoribosylaminoimidazolecarboxamide formyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH AICAR Transformylase Inosine Monophosphate Cyclohydrolase Deficiency (ortholog); blindness (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 4 145123063 145143390 + 22301074;30032202 116899476 MODEL JAAIVD010000003;XM_032901301 XP_032757192 bifunctional purine biosynthesis protein PURH protein-coding 626104240 LOC116897087 60S ribosomal protein L34-like 3 157808534 157808887 + 22301074;30032202 116897087 MODEL JAAIVD010000012;XM_032898724 XP_032754615 protein-coding 626104243 LOC116912056 collagen alpha-1(I) chain-like 11 94763207 94765645 - 116912056 MODEL JAAIVD010000006;XM_032915921 XP_032771812 protein-coding 626104252 Arl14 ARF like GTPase 14 3 86069678 86070481 - 22301074;30032202 116896793 MODEL JAAIVD010000012;XM_032898262 XP_032754153 ADP ribosylation factor like GTPase 14;ADP-ribosylation factor-like protein 14 protein-coding 626104257 LOC116909625 ADP/ATP translocase 2-like 9 69121382 69122440 - 116909625 MODEL JAAIVD010000002 pseudo 626104258 Pc pyruvate carboxylase ENCODES a protein that exhibits biotin binding (ortholog); identical protein binding (ortholog); pyruvate carboxylase activity (ortholog); INVOLVED IN gluconeogenesis (ortholog); host-mediated activation of viral process (ortholog); NADP+ metabolic process (ortholog); PARTICIPATES IN alanine metabolic pathway; citric acid cycle pathway; fructose-1,6-bisphosphatase deficiency pathway; ASSOCIATED WITH bipolar disorder (ortholog); Burkitt lymphoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 2 3044145 3142564 - 22301074;30032202 116890763 MODEL JAAIVD010000001;XM_032891223 XP_032747114 pyruvate carboxylase, mitochondrial protein-coding 626104282 Btbd16 BTB domain containing 16 ASSOCIATED WITH prostate cancer (ortholog) 2 71259942 71312813 - 116891419 MODEL JAAIVD010000001;XM_032892445 XP_032748336 BTB/POZ domain-containing protein 16 protein-coding 626104301 LOC116886275 cytochrome c-like 17 16631071 16631540 - 116886275 MODEL JAAIVD010000011 pseudo 626104302 Stab2 stabilin 2 ENCODES a protein that exhibits cargo receptor activity (ortholog); hyaluronic acid binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN defense response to bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); endocytosis (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 1 165955547 166134795 - 22301074 116907681 MODEL JAAIVD010000025;XM_032910783;XM_032910792 XP_032766674;XP_032766683 stabilin-2 protein-coding 626104376 LOC116906043 heterogeneous nuclear ribonucleoprotein A3-like 7 44458415 44460839 - 116906043 MODEL JAAIVD010000026 pseudo 626104377 LOC116895521 small EDRK-rich factor 2-like 3 117962768 117963080 - 116895521 MODEL JAAIVD010000012;XM_032896766 XP_032752657 protein-coding 626104382 Copz1 coat protein complex I subunit zeta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); FOUND IN COPI vesicle coat (ortholog) 1 259783212 259809405 - 22301074;30032202 116883231 MODEL JAAIVD010000025;XM_032884242;XM_032884247 XP_032740133;XP_032740138 COPI coat complex subunit zeta 1;coatomer subunit zeta-1 protein-coding 626104398 Magi1 membrane associated guanylate kinase, WW and PDZ domain containing 1 ENCODES a protein that exhibits alpha-actinin binding (ortholog); INVOLVED IN endothelial cell morphogenesis (ortholog); positive regulation of cell-cell adhesion (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); intrahepatic cholangiocarcinoma (ortholog); FOUND IN adherens junction (ortholog); cell junction (ortholog); cell periphery (ortholog) 6 52678920 53288579 + 22301074;30032202 116903483 MODEL JAAIVD010000024;XM_032906050;XM_032906051;XM_032906052;XM_032906053;XM_032906054;XM_032906055;XM_032906056;XM_032906057;XM_032906058 XP_032761941;XP_032761942;XP_032761943;XP_032761944;XP_032761945;XP_032761946;XP_032761947;XP_032761948;XP_032761949 membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1 protein-coding 626104448 LOC116906848 developmental pluripotency-associated protein 3-like 8 49947002 49947454 - 30032202 116906848 MODEL JAAIVD010000027;XM_032909742 XP_032765633 protein-coding 626104451 Hk2 hexokinase 2 ENCODES a protein that exhibits ATP binding (ortholog); D-glucose binding (ortholog); fructokinase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); canonical glycolysis (ortholog); carbohydrate phosphorylation (ortholog); PARTICIPATES IN altered carbohydrate metabolic pathway; congenital sucrase-isomaltase deficiency pathway; Fanconi syndrome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Chronic Intermittent Hypoxia (ortholog); hypertension (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 6 63447720 63497609 + 22301074;30032202 116903642 MODEL JAAIVD010000024;XM_032906302 XP_032762193 hexokinase-2 protein-coding 626104472 Sucnr1 succinate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); signaling receptor activity (ortholog); INVOLVED IN circadian regulation of gene expression (ortholog); energy homeostasis (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 3 95011947 95050873 - 22301074;30032202 116895863 MODEL JAAIVD010000012;XM_032896965 XP_032752856 protein-coding 626104477 Fam83d family with sequence similarity 83 member D ENCODES a protein that exhibits kinesin binding (ortholog); microtubule binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 5 138109926 138129331 + 30032202 116902243 MODEL JAAIVD010000023;XM_032904660 XP_032760551 protein FAM83D protein-coding 626104485 Flad1 flavin adenine dinucleotide synthetase 1 ENCODES a protein that exhibits FAD diphosphatase activity (ortholog); FMN adenylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN FAD biosynthetic process (ortholog); flavin adenine dinucleotide biosynthetic process (ortholog); riboflavin metabolic process (ortholog); PARTICIPATES IN riboflavin metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); multiple acyl-CoA dehydrogenase deficiency (ortholog); Myopathy with Abnormal Lipid Metabolism (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 3 64256239 64265526 + 22301074;30032202 116896642 MODEL JAAIVD010000012;XM_032897962;XM_032897963;XM_032897964;XR_004387351 XP_032753853;XP_032753854;XP_032753855 FAD synthase protein-coding 626104506 Tatdn2 TatD DNase domain containing 2 6 32823254 32839022 - 22301074 116903400 MODEL JAAIVD010000024;XM_032905911;XR_004388275 XP_032761802 putative deoxyribonuclease TATDN2 protein-coding 626104522 LOC116910762 U6 spliceosomal RNA 9 52553093 52553199 - 116910762 MODEL JAAIVD010000002;XR_004389271 snrna 626104525 LOC116891546 pyruvate kinase PKM-like 1 53954858 53967695 + 116891546 MODEL JAAIVD010000025 pseudo 626104526 LOC116893029 cytochrome b-c1 complex subunit 7-like 2 228205378 228205919 + 116893029 MODEL JAAIVD010000001 pseudo 626104527 LOC116900069 uncharacterized LOC116900069 5 9064797 9069899 - 116900069 MODEL JAAIVD010000023;XR_004387914 ncrna 626104533 Dpp10 dipeptidyl peptidase like 10 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of protein localization to plasma membrane (ortholog); protein localization to plasma membrane (ortholog); regulation of potassium ion transmembrane transport (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); Bronchial Hyperreactivity (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 10 15905988 16007096 - 22301074;30032202 116911761 MODEL JAAIVD010000005;XM_032915754 XP_032771645 inactive dipeptidyl peptidase 10 protein-coding 626104555 Ier2 immediate early response 2 INVOLVED IN cell motility (ortholog); neuron differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH childhood acute myeloid leukemia (ortholog); colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 15629547 15631128 + 116886451 MODEL JAAIVD010000011;XM_032887951 XP_032743842 immediate early response gene 2 protein protein-coding 626104560 LOC116914571 ral guanine nucleotide dissociation stimulator-like 13 11639962 11641942 - 116914571 MODEL JAAIVD010000008;XM_032918928 XP_032774819 protein-coding 626104565 U2af2 U2 small nuclear RNA auxiliary factor 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); enzyme binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); negative regulation of protein ubiquitination (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH developmental delay, dysmorphic facies, and brain anomalies (ortholog); genetic disease (ortholog); leukodystrophy (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); Prp19 complex (ortholog) 2 177640862 177658459 + 22301074;30032202 116892684 MODEL JAAIVD010000001;XM_032894532;XM_032894533 XP_032750423;XP_032750424 splicing factor U2AF 65 kDa subunit protein-coding 626104583 LOC116888035 high mobility group protein B4-like X 84154343 84174398 - 116888035 MODEL JAAIVD010000014 pseudo 626104584 LOC116887376 60S ribosomal protein L13-like 18 11425459 11426010 + 22301074;30032202 116887376 MODEL JAAIVD010000013;XM_032888972;XM_032888973 XP_032744863;XP_032744864 protein-coding 626104590 C5H20orf204 chromosome 5 C20orf204 homolog 5 158756372 158758913 + 116900801 MODEL JAAIVD010000023;XM_032902513;XM_032902514;XM_032902515;XM_032902516;XM_032902517 XP_032758404;XP_032758405;XP_032758406;XP_032758407;XP_032758408 uncharacterized protein C20orf204 homolog protein-coding 626104606 Pomt2 protein O-mannosyltransferase 2 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); INVOLVED IN basement membrane organization (ortholog); dentate gyrus development (ortholog); positive regulation of protein O-linked glycosylation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2N (ortholog); FOUND IN cytosol (ortholog); dolichyl-phosphate-mannose-protein mannosyltransferase complex (ortholog); nucleolus (ortholog) 7 101209797 101248678 - 22301074;30032202 116905318 MODEL JAAIVD010000026;XM_032908209 XP_032764100 protein O-mannosyl-transferase 2 protein-coding 626104631 LOC116888224 E3 ubiquitin-protein ligase Arkadia-like X 129333538 129357429 + 30032202 116888224 MODEL JAAIVD010000014;XM_032889513 XP_032745404 protein-coding 626104637 Lrpap1 LDL receptor related protein associated protein 1 ENCODES a protein that exhibits lipase binding (ortholog); low-density lipoprotein particle receptor binding (ortholog); receptor antagonist activity (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); negative regulation of amyloid-beta clearance (ortholog); negative regulation of receptor internalization (ortholog); PARTICIPATES IN Hedgehog signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); dementia (ortholog); membranous glomerulonephritis (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 11 69974697 69988268 + 22301074;30032202 116912255 MODEL JAAIVD010000006;XM_032916239 XP_032772130 alpha-2-macroglobulin receptor-associated protein protein-coding 626104649 Slc4a2 solute carrier family 4 member 2 ENCODES a protein that exhibits chloride transmembrane transporter activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); enzyme binding (ortholog); INVOLVED IN amelogenesis (ortholog); chloride transport (ortholog); digestive tract development (ortholog); ASSOCIATED WITH Alkalosis (ortholog); Autosomal Recessive Osteopetrosis 9 (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); membrane (ortholog) 6 153617165 153634464 + 22301074;30032202 116904204 MODEL JAAIVD010000024;XM_032907119;XM_032907120;XM_032907121;XM_032907122;XM_032907123;XM_032907124;XM_032907125 XP_032763010;XP_032763011;XP_032763012;XP_032763013;XP_032763014;XP_032763015;XP_032763016 anion exchange protein 2 protein-coding 626104693 C5H9orf50 chromosome 5 C9orf50 homolog FOUND IN cytoplasm (ortholog) 5 4821373 4827595 + 116901177 MODEL JAAIVD010000023;XM_032902845 XP_032758736 uncharacterized protein C9orf50 homolog protein-coding 626104704 LOC116893485 vomeronasal type-1 receptor 4-like 2 181305649 181306567 - 116893485 MODEL JAAIVD010000001 pseudo 626104705 LOC116904092 60S ribosomal protein L31-like 6 132474466 132474891 - 116904092 MODEL JAAIVD010000024 pseudo 626104706 Lmx1b LIM homeobox transcription factor 1 beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autophagosome-lysosome fusion (ortholog); camera-type eye development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH clubfoot (ortholog); disease of mental health (ortholog); familial hyperlipidemia (ortholog); FOUND IN nucleus (ortholog) 5 1994870 2073021 + 22301074;30032202 116900040 MODEL JAAIVD010000023;XM_032901835;XM_032901837;XM_032901838 XP_032757726;XP_032757728;XP_032757729 LIM homeobox transcription factor 1-beta protein-coding 626104726 LOC116893213 40S ribosomal protein S4, X isoform-like 2 114047021 114047996 + 116893213 MODEL JAAIVD010000001 pseudo 626104727 Dcaf11 DDB1 and CUL4 associated factor 11 INVOLVED IN cognition (ortholog); exploration behavior (ortholog); gene expression (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); nucleoplasm (ortholog) 12 69440807 69451239 - 22301074;30032202 116913336 MODEL JAAIVD010000007;XM_032917484;XM_032917485;XM_032917486;XM_032917487;XM_032917488 XP_032773375;XP_032773376;XP_032773377;XP_032773378;XP_032773379 DDB1- and CUL4-associated factor 11 protein-coding 626104756 LOC116912717 D-3-phosphoglycerate dehydrogenase-like 11 3536263 3538052 - 22301074;30032202 116912717 MODEL JAAIVD010000006;XM_032916843 XP_032772734 protein-coding 626104761 LOC116889137 cytochrome c oxidase subunit 7B, mitochondrial-like X 86920241 86920715 - 22301074;30032202 116889137 MODEL JAAIVD010000014;XM_032890309 XP_032746200 protein-coding 626104766 Peg3 paternally expressed 3 INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Parasitic Liver Diseases (ortholog); FOUND IN autophagosome (ortholog); nucleus (ortholog) 2 179386977 179401598 + 30032202 116892719 MODEL JAAIVD010000001;XM_032894586 XP_032750477 paternally-expressed gene 3 protein protein-coding 626104777 Spta1 spectrin alpha, erythrocytic 1 INVOLVED IN actin cytoskeleton organization (ortholog); hemopoiesis (ortholog); lymphocyte homeostasis (ortholog); ASSOCIATED WITH anemia (ortholog); congenital hemolytic anemia (ortholog); Elliptocytosis 2 (ortholog); FOUND IN axon (ortholog); cortical cytoskeleton (ortholog); cuticular plate (ortholog) 10 52873789 52941570 + 22301074;30032202 116910921 MODEL JAAIVD010000005;XM_032914675 XP_032770566 spectrin alpha chain, erythrocytic 1 protein-coding 626104832 LOC116890082 keratin, type I cytoskeletal 18-like 1 217017196 217018448 - 116890082 MODEL JAAIVD010000025 pseudo 626104833 LOC116900388 olfactory receptor 5D18-like 5 69720938 69721888 - 22301074;30032202 116900388 MODEL JAAIVD010000023;XM_032902135 XP_032758026 protein-coding 626104836 Dhx57 DExH-box helicase 57 7 12780899 12832191 + 22301074;30032202 116905849 MODEL JAAIVD010000026;XM_032908819;XM_032908820;XM_032908821;XM_032908822;XR_004388570 XP_032764710;XP_032764711;XP_032764712;XP_032764713 putative ATP-dependent RNA helicase DHX57 protein-coding 626104879 LOC116889212 homeobox protein Rhox5 X 103474490 103480091 + 22301074 116889212 MODEL JAAIVD010000014;XM_032890364 XP_032746255 protein-coding 626104889 LOC116892740 zinc finger protein 485-like 2 179417298 179429378 + 22301074;30032202 116892740 MODEL JAAIVD010000001;XM_032894614 XP_032750505 protein-coding 626104898 LOC116912932 U6 spliceosomal RNA 11 73586727 73586830 + 116912932 MODEL JAAIVD010000006;XR_004389502 snrna 626104901 LOC116887891 Kruppel-like factor 18 1 64121444 64123634 - 30032202 116887891 MODEL JAAIVD010000025;XM_032889373 XP_032745264 protein-coding 626104906 LOC116889174 40S ribosomal protein S24-like X 38297167 38297585 + 116889174 MODEL JAAIVD010000014 pseudo 626104907 Garin1b golgi associated RAB2 interactor 1B INVOLVED IN acrosome assembly (ortholog); acrosome reaction (ortholog); FOUND IN Golgi apparatus (ortholog) 6 110226834 110243323 - 30032202 116902915 MODEL JAAIVD010000024;XM_032905241 XP_032761132 Fam71f1 family with sequence similarity 71 member F1;protein FAM71F1 protein-coding 626104918 LOC116883260 putative serine protease 47 14 74601384 74614852 + 22301074 116883260 MODEL JAAIVD010000009;XM_032884255 XP_032740146 protein-coding 626104925 LOC116903662 14-3-3 protein sigma-like 6 66188349 66189218 - 116903662 MODEL JAAIVD010000024 pseudo 626104926 Serpini2 serpin family I member 2 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); ASSOCIATED WITH Shwachman-Diamond syndrome (ortholog) 3 78600559 78623500 + 30032202 116895454 MODEL JAAIVD010000012;XM_032896726 XP_032752617 serpin I2 protein-coding 626104938 LOC116897996 eukaryotic translation initiation factor 5-like 4 24614677 24620801 - 116897996 MODEL JAAIVD010000003 pseudo 626104939 LOC116889339 60S ribosomal protein L24-like 1 132256961 132257488 - 30032202 116889339 MODEL JAAIVD010000025;XM_032890457 XP_032746348 protein-coding 626104944 Chtf8 chromosome transmission fidelity factor 8 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN positive regulation of DNA-directed DNA polymerase activity (ortholog); FOUND IN Ctf18 RFC-like complex (ortholog) 17 26607744 26618047 - 22301074 116886071 MODEL JAAIVD010000011;XM_032887384 XP_032743275 chromosome transmission fidelity protein 8 homolog protein-coding 626104952 LOC116895733 receptor of activated protein C kinase 1-like 3 28106259 28106715 - 116895733 MODEL JAAIVD010000012 pseudo 626104953 LOC116902938 igE-binding protein-like 6 95966526 95967645 - 22301074 116902938 MODEL JAAIVD010000024;XM_032905262 XP_032761153 protein-coding 626104957 LOC116890589 small nucleolar RNA SNORA17 1 242785013 242785138 - 116890589 MODEL JAAIVD010000025;XR_004386748 snorna 626104960 LOC116908228 tripartite motif-containing protein 43B-like 8 81419968 81426138 - 22301074 116908228 MODEL JAAIVD010000027;XM_032911493 XP_032767384 protein-coding 626104966 LOC116894935 small nucleolar RNA SNORD115 2 140301555 140301633 - 116894935 MODEL JAAIVD010000001;XR_004387134 snorna 626104969 Trnaa-ugc transfer RNA alanine (anticodon UGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28503318 28503389 - 116886020 MODEL JAAIVD010000004 trna 626104970 LOC116886681 disks large homolog 5-like 17 14608595 14611830 - 116886681 MODEL JAAIVD010000011;XM_032888176 XP_032744067 protein-coding 626104977 Rpp40 ribonuclease P/MRP subunit p40 ENCODES a protein that exhibits ribonuclease P activity (ortholog); ribonuclease P RNA binding (ortholog); INVOLVED IN tRNA 5'-leader removal (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN multimeric ribonuclease P complex (ortholog) 14 54535327 54544272 - 22301074;30032202 116883791 MODEL JAAIVD010000009;XM_032885035;XM_032885037;XM_032885038 XP_032740926;XP_032740928;XP_032740929 ribonuclease P protein subunit p40 protein-coding 626104996 Zfand1 zinc finger AN1-type containing 1 ENCODES a protein that exhibits proteasome binding (ortholog); INVOLVED IN cellular response to arsenite ion (ortholog); cellular response to heat (ortholog); cellular response to osmotic stress (ortholog); FOUND IN cytoplasmic stress granule (ortholog) 3 144389841 144399657 - 22301074;30032202 116897035 MODEL JAAIVD010000012;XM_032898656 XP_032754547 AN1-type zinc finger protein 1 protein-coding 626105008 LOC116914890 uncharacterized LOC116914890 13 27134154 27144903 - 116914890 MODEL JAAIVD010000008;XR_004389786 ncrna 626105013 LOC116903252 tubulin alpha-3 chain 6 22618131 22628260 + 22301074;30032202 116903252 MODEL JAAIVD010000024;XM_032905633;XM_032905634 XP_032761524;XP_032761525 protein-coding 626105027 Rbm43 RNA binding motif protein 43 5 29710161 29722208 - 22301074 116901401 MODEL JAAIVD010000023;XM_032903276;XM_032903277 XP_032759167;XP_032759168 RNA-binding protein 43 protein-coding 626105039 Wbp4 WW domain binding protein 4 ENCODES a protein that exhibits proline-rich region binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, FEEDING DIFFICULTIES, FACIAL DYSMORPHISM, AND BRAIN ABNORMALITIES (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 12 44860007 44885685 + 22301074;30032202 116913156 MODEL JAAIVD010000007;XM_032917364 XP_032773255 WW domain-binding protein 4 protein-coding 626105051 Prodh2 proline dehydrogenase 2 ENCODES a protein that exhibits oxidoreductase activity, acting on the CH-NH group of donors (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 2 165495942 165509708 - 30032202 116893371 MODEL JAAIVD010000001;XM_032895171 XP_032751062 hydroxyproline dehydrogenase protein-coding 626105064 LOC116899014 glyceraldehyde-3-phosphate dehydrogenase-like 1 45667085 45667324 - 22301074;30032202 116899014 MODEL JAAIVD010000025;XM_032900466 XP_032756357 protein-coding 626105067 Msantd1 Myb/SANT DNA binding domain containing 1 11 70159667 70172798 - 30032202 116911941 MODEL JAAIVD010000006;XM_032915840;XM_032915841;XM_032915842;XR_004389409 XP_032771731;XP_032771732;XP_032771733 myb/SANT-like DNA-binding domain-containing protein 1 protein-coding 626105084 LOC116893548 zinc finger BED domain-containing protein 4-like 2 207719043 207724687 - 116893548 MODEL JAAIVD010000001 pseudo 626105085 LOC116908825 keratin-associated protein 4-5-like 9 54578259 54578904 - 116908825 MODEL JAAIVD010000002 pseudo 626105086 LOC116893741 glyceraldehyde-3-phosphate dehydrogenase-like 2 21298588 21299593 - 116893741 MODEL JAAIVD010000001 pseudo 626105087 Fam184a family with sequence similarity 184 member A ASSOCIATED WITH epilepsy (ortholog); substance-related disorder (ortholog); FOUND IN centriolar satellite (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 18 30598810 30711925 - 116887005 MODEL JAAIVD010000013;XM_032888489 XP_032744380 protein FAM184A protein-coding 626105109 LOC116906073 Ig heavy chain V region 93G7-like 7 62688030 62688487 - 116906073 MODEL JAAIVD010000026 pseudo 626105110 Nanp N-acetylneuraminic acid phosphatase ENCODES a protein that exhibits N-acylneuraminate-9-phosphatase activity (ortholog); INVOLVED IN CMP-N-acetylneuraminate biosynthetic process (ortholog); glycosylation (ortholog); N-acetylneuraminate biosynthetic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; sialic acid storage disease pathway; FOUND IN cytosol (ortholog) 5 130711551 130726376 - 22301074 116902102 MODEL JAAIVD010000023;XM_032904404;XM_032904405 XP_032760295;XP_032760296 N-acylneuraminate-9-phosphatase protein-coding 626105119 LOC116898418 glyceraldehyde-3-phosphate dehydrogenase-like 4 88600329 88605663 + 116898418 MODEL JAAIVD010000003 pseudo 626105120 LOC116894194 olfactory receptor 483 2 106178080 106179027 + 22301074;30032202 116894194 MODEL JAAIVD010000001;XM_032895908 XP_032751799 protein-coding 626105123 LOC116890277 polypyrimidine tract-binding protein 1-like 1 263826010 263827680 + 116890277 MODEL JAAIVD010000025 pseudo 626105124 Qtrt1 queuine tRNA-ribosyltransferase catalytic subunit 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); tRNA-guanosine(34) queuine transglycosylase activity (ortholog); INVOLVED IN tRNA modification (ortholog); tRNA wobble guanine modification (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 8 17684108 17691886 + 22301074;30032202 116907540 MODEL JAAIVD010000027;XM_032910559 XP_032766450 protein-coding 626105138 Prom1 prominin 1 ENCODES a protein that exhibits actinin binding (ortholog); cadherin binding (ortholog); INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); glomerular parietal epithelial cell differentiation (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); Colorectal Neoplasms (ortholog); cone-rod dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); cell projection (ortholog) 11 61683282 61775952 + 30032202 116912102 MODEL JAAIVD010000006;XM_032915997 XP_032771888 prominin-1 protein-coding 626105168 LOC116915190 small nucleolar RNA SNORA68 13 13140150 13140278 - 116915190 MODEL JAAIVD010000008;XR_004389846 snorna 626105171 LOC116894190 glyceraldehyde-3-phosphate dehydrogenase-like 1 72136979 72153267 + 22301074;30032202 116894190 MODEL JAAIVD010000025;XM_032895937 XP_032751828 protein-coding 626105175 Adam8 ADAM metallopeptidase domain 8 ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); immunoglobulin receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical NF-kappaB signal transduction (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH asthma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN alpha9-beta1 integrin-ADAM8 complex (ortholog); cell surface (ortholog); cytoplasm (ortholog) 2 61862935 61875592 + 22301074;30032202 116891356 MODEL JAAIVD010000001;XM_032892352 XP_032748243 disintegrin and metalloproteinase domain-containing protein 8 protein-coding 626105203 LOC116911384 zona pellucida sperm-binding protein 3 receptor 10 5197382 5249170 + 30032202 116911384 MODEL JAAIVD010000005;XM_032915335;XM_032915336;XM_032915337 XP_032771226;XP_032771227;XP_032771228 protein-coding 626105223 Ttll3 tubulin tyrosine ligase like 3 ENCODES a protein that exhibits protein-glycine ligase activity (ortholog); protein-glycine ligase activity, initiating (ortholog); INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); protein polyglycylation (ortholog); FOUND IN axoneme (ortholog); cilium (ortholog); microtubule cytoskeleton (ortholog) 6 33127004 33148558 - 22301074;30032202 116903418 MODEL JAAIVD010000024;XM_032905942 XP_032761833 tubulin monoglycylase TTLL3 protein-coding 626105240 U2surp U2 snRNP associated SURP domain containing ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U2 snRNP (ortholog) 8 86922472 86976323 - 22301074;30032202 116907007 MODEL JAAIVD010000027;XM_032909935;XM_032909936;XM_032909937;XM_032909938;XM_032909939 XP_032765826;XP_032765827;XP_032765828;XP_032765829;XP_032765830 U2 snRNP-associated SURP motif-containing protein protein-coding 626105281 LOC116888059 developmental pluripotency-associated protein 4-like X 88288622 88298727 - 116888059 MODEL JAAIVD010000014 pseudo 626105282 LOC116912035 heterogeneous nuclear ribonucleoprotein C-like 11 77443379 77444282 + 116912035 MODEL JAAIVD010000006 pseudo 626105283 Rnf2 ring finger protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); histone H2AK119 ubiquitin ligase activity (ortholog); RING-like zinc finger domain binding (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Chronic Pancreatitis (ortholog); Luo-Schoch-Yamamoto syndrome (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN cytoplasm (ortholog); euchromatin (ortholog); heterochromatin (ortholog) 10 30898434 30926395 - 30032202 116911138 MODEL JAAIVD010000005;XM_032914989 XP_032770880 E3 ubiquitin-protein ligase RING2 protein-coding 626105294 Pcgf6 polycomb group ring finger 6 INVOLVED IN chromatin remodeling (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN nucleus (ortholog); PcG protein complex (ortholog); PRC1 complex (ortholog) 2 46566549 46587314 - 30032202 116891262 MODEL JAAIVD010000001;XM_032892147;XM_032892148;XM_032892150;XM_032892151 XP_032748038;XP_032748039;XP_032748041;XP_032748042 polycomb group RING finger protein 6 protein-coding 626105318 Kcnk15 potassium two pore domain channel subfamily K member 15 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity (ortholog) 5 154120112 154126867 - 22301074;30032202 116902370 MODEL JAAIVD010000023;XM_032904867 XP_032760758 potassium channel subfamily K member 15 protein-coding 626105324 Tuba1b tubulin alpha 1b ENCODES a protein that exhibits double-stranded RNA binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to interleukin-4 (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; tyrosinemia type III pathway; vinblastine pharmacodynamics pathway; ASSOCIATED WITH congenital fibrosis of the extraocular muscles (ortholog); neuromuscular disease (ortholog); osteoporosis (ortholog); FOUND IN cilium (ortholog); cytoplasmic microtubule (ortholog); membrane raft (ortholog) 1 271756752 271759753 - 22301074;30032202 116884906 MODEL JAAIVD010000025;XM_032886132 XP_032742023 tubulin alpha-1B chain protein-coding 626105332 Hus1b HUS1 checkpoint clamp component B 14 49985275 49988870 - 22301074;30032202 116883836 MODEL JAAIVD010000009;XM_032885098 XP_032740989 checkpoint protein HUS1B protein-coding 626105337 Dleu7 deleted in lymphocytic leukemia 7 12 62124859 62140595 + 116913886 MODEL JAAIVD010000007;XM_032918174 XP_032774065 leukemia-associated protein 7 protein-coding 626105343 LOC116906598 ATP synthase subunit g, mitochondrial-like 8 50675224 50675526 + 116906598 MODEL JAAIVD010000027 pseudo 626105344 Bin2 bridging integrator 2 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN cell chemotaxis (ortholog); phagocytosis, engulfment (ortholog); plasma membrane tubulation (ortholog); FOUND IN phagocytic cup (ortholog); plasma membrane (ortholog); podosome (ortholog) 1 262440827 262474991 + 22301074;30032202 116890234 MODEL JAAIVD010000025;XM_032890966 XP_032746857 protein-coding 626105359 Rnf170 ring finger protein 170 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN adult walking behavior (ortholog); gene expression (ortholog); innate immune response (ortholog); ASSOCIATED WITH autosomal dominant sensory ataxia 1 (ortholog); genetic disease (ortholog); hereditary ataxia (ortholog) 13 60359813 60382462 - 30032202 116914235 MODEL JAAIVD010000008;XM_032918434;XM_032918435;XM_032918436;XM_032918437;XM_032918438;XM_032918439;XM_032918440;XM_032918441 XP_032774325;XP_032774326;XP_032774327;XP_032774328;XP_032774329;XP_032774330;XP_032774331;XP_032774332 E3 ubiquitin-protein ligase RNF170 protein-coding 626105388 Hat1 histone acetyltransferase 1 ENCODES a protein that exhibits histone H4K12 acetyltransferase activity (ortholog); INVOLVED IN nucleosome assembly (ortholog); response to nutrient (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 5 48684815 48732063 + 22301074;30032202 116901505 MODEL JAAIVD010000023;XM_032903474 XP_032759365 histone acetyltransferase type B catalytic subunit protein-coding 626105403 Insig2 insulin induced gene 2 ENCODES a protein that exhibits oxysterol binding (ortholog); protein sequestering activity (ortholog); INVOLVED IN cholesterol biosynthetic process (ortholog); cholesterol metabolic process (ortholog); cranial suture morphogenesis (ortholog); PARTICIPATES IN sterol regulatory element-binding protein signaling pathway; ASSOCIATED WITH end stage renal disease (ortholog); Experimental Liver Cirrhosis (ortholog); Hypertriglyceridemia (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); SREBP-SCAP-Insig complex (ortholog) 10 13896099 13918607 - 30032202 116911197 MODEL JAAIVD010000005;XM_032915068 XP_032770959 insulin-induced gene 2 protein protein-coding 626105413 LOC116890523 small nucleolar RNA SNORA17 1 232520509 232520645 - 116890523 MODEL JAAIVD010000025;XR_004386705 snorna 626105416 LOC116914484 uncharacterized LOC116914484 1 253309107 253314877 + 116914484 MODEL JAAIVD010000025;XR_004389750;XR_004389751;XR_004389752 ncrna 626105426 LOC116906346 U7 small nuclear RNA 7 111754234 111754296 + 116906346 MODEL JAAIVD010000026;XR_004388626 snrna 626105429 Cpne6 copine 6 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); positive regulation of dendrite extension (ortholog); postsynaptic actin cytoskeleton organization (ortholog); FOUND IN axon (ortholog); clathrin-coated endocytic vesicle (ortholog); cytoplasm (ortholog) 12 69490998 69497828 - 30032202 116913305 MODEL JAAIVD010000007;XM_032917441 XP_032773332 copine-6 protein-coding 626105450 Man2c1 mannosidase alpha class 2C member 1 ENCODES a protein that exhibits alpha-mannosidase activity (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); congenital disorder of deglycosylation 2 (ortholog); Hypogonadotropic Hypogonadism 27 without Anosmia (ortholog); FOUND IN nucleoplasm (ortholog) 8 51043491 51054701 + 22301074;30032202 116906893 MODEL JAAIVD010000027;XM_032909804 XP_032765695 alpha-mannosidase 2C1 protein-coding 626105480 LOC116888054 interferon alpha-12-like 1 65600294 65600843 + 116888054 MODEL JAAIVD010000025 pseudo 626105481 LOC116884801 T-complex protein 1 subunit zeta-like 15 3221234 3222814 - 116884801 MODEL JAAIVD010000010 pseudo 626105482 Pde6g phosphodiesterase 6G ENCODES a protein that exhibits spectrin binding (ortholog); INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH fundus dystrophy (ortholog); retinitis pigmentosa (ortholog); retinitis pigmentosa 57 (ortholog) 9 63571596 63576797 + 22301074;30032202 116909000 MODEL JAAIVD010000002;XM_032912468 XP_032768359 retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma protein-coding 626105490 Tmem270 transmembrane protein 270 16 19139919 19145167 + 116885417 MODEL JAAIVD010000004;XM_032886703;XM_032886704 XP_032742594;XP_032742595 protein-coding 626105501 LOC116898079 14-3-3 protein zeta/delta-like 4 91447546 91454473 - 116898079 MODEL JAAIVD010000003 pseudo 626105502 Trappc9 trafficking protein particle complex subunit 9 INVOLVED IN cerebral cortex development (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive intellectual developmental disorder 13 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); TRAPP complex (ortholog) 1 245385533 245850059 - 30032202 116912359 MODEL JAAIVD010000025;XM_032916420;XM_032916426 XP_032772311;XP_032772317 trafficking protein particle complex 9 protein-coding 626105530 Nop16 NOP16 nucleolar protein ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 14 72926876 72931717 - 30032202 116883668 MODEL JAAIVD010000009;XM_032884865 XP_032740756 nucleolar protein 16 protein-coding 626105539 LOC116884588 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 15 54432774 54433208 - 116884588 MODEL JAAIVD010000010 pseudo 626105540 LOC116892033 uncharacterized LOC116892033 2 140061589 140068698 + 116892033 MODEL JAAIVD010000001;XR_004386905 ncrna 626105545 LOC116914344 guanine nucleotide exchange factor MSS4-like 13 52821347 52824399 + 116914344 MODEL JAAIVD010000008 pseudo 626105546 LOC116887919 40S ribosomal protein SA-like X 57117281 57118050 - 116887919 MODEL JAAIVD010000014 pseudo 626105547 LOC116906362 small nucleolar RNA SNORD113/SNORD114 family 7 127264932 127265006 + 116906362 MODEL JAAIVD010000026;XR_004388633 snorna 626105550 Cenpl centromere protein L FOUND IN inner kinetochore (ortholog) 10 40358991 40373218 + 116911445 MODEL JAAIVD010000005;XM_032915413 XP_032771304 protein-coding 626105560 LOC116890935 testis-expressed protein 54-like 2 9203026 9203521 - 116890935 MODEL JAAIVD010000001;XM_032891578 XP_032747469 protein-coding 626105566 Kat5 lysine acetyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); apoptotic process (ortholog); attachment of mitotic spindle microtubules to kinetochore (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; histone modification pathway; INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); breast cancer (ortholog); iron deficiency anemia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 2077052 2084303 + 22301074 116890709 MODEL JAAIVD010000001;XM_032891141;XM_032891142;XM_032891144;XM_032891145 XP_032747032;XP_032747033;XP_032747035;XP_032747036 histone acetyltransferase KAT5 protein-coding 626105590 LOC116903586 mitochondrial import inner membrane translocase subunit Tim23-like 6 27060151 27061807 - 116903586 MODEL JAAIVD010000024 pseudo 626105591 Snx33 sorting nexin 33 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); membrane (ortholog) 8 50824241 50835088 - 22301074;30032202 116906997 MODEL JAAIVD010000027;XM_032909926 XP_032765817 sorting nexin-33 protein-coding 626105598 LOC116885312 60S ribosomal protein L27a-like 1 5051275 5052419 + 116885312 MODEL JAAIVD010000025 pseudo 626105599 LOC116897916 uncharacterized LOC116897916 4 39703619 39708237 - 116897916 MODEL JAAIVD010000003;XR_004387630 ncrna 626105603 Gsx1 GS homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN adenohypophysis development (ortholog); hypothalamus development (ortholog); neuron fate commitment (ortholog) 16 6666987 6668404 - 22301074;30032202 116885822 MODEL JAAIVD010000004;XM_032887169 XP_032743060 protein-coding 626105608 LOC116898626 60S ribosomal protein L37-like 4 2413446 2413766 - 116898626 MODEL JAAIVD010000003 pseudo 626105609 LOC116897930 olfactory receptor Olfr180 4 42810789 42811748 - 22301074;30032202 116897930 MODEL JAAIVD010000003;XM_032899330 XP_032755221 protein-coding 626105612 Cetn3 centrin 3 ENCODES a protein that exhibits G-protein beta/gamma-subunit complex binding (ortholog); microtubule binding (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 3 214552426 214564836 - 22301074;30032202 116897329 MODEL JAAIVD010000012;XM_032899085;XM_032899086 XP_032754976;XP_032754977 centrin-3 protein-coding 626105626 LOC116888349 protein PPP4R3C-like X 50314768 50317252 - 116888349 MODEL JAAIVD010000014 pseudo 626105627 Mbnl3 muscleblind like splicing regulator 3 INVOLVED IN negative regulation of myoblast differentiation (ortholog); regulation of RNA splicing (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) X 114634184 114721635 + 22301074 116888902 MODEL JAAIVD010000014;XM_032890160 XP_032746051 muscleblind-like protein 3 protein-coding 626105641 Cc2d2b coiled-coil and C2 domain containing 2B 2 39871407 39956398 + 30032202 116893793 MODEL JAAIVD010000001;XM_032895496 XP_032751387 protein CC2D2B protein-coding 626105677 Ifnlr1 interferon lambda receptor 1 INVOLVED IN defense response to virus (ortholog); mucosal immune response (ortholog); positive regulation of cellular respiration (ortholog); ASSOCIATED WITH psoriasis (ortholog); FOUND IN interleukin-28 receptor complex (ortholog) 1 22513556 22535941 - 22301074 116894523 MODEL JAAIVD010000025;XM_032896226 XP_032752117 protein-coding 626105688 LOC116900287 olfactory receptor 8K3-like 5 63557573 63558520 + 22301074;30032202 116900287 MODEL JAAIVD010000023;XM_032902042 XP_032757933 protein-coding 626105692 LOC116883902 40S ribosomal protein S11-like 14 49971802 49972326 + 116883902 MODEL JAAIVD010000009 pseudo 626105693 Pomp proteasome maturation protein INVOLVED IN proteasome assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); exfoliation syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 16 5981602 5995814 - 22301074;30032202 116885606 MODEL JAAIVD010000004;XM_032886908 XP_032742799 protein-coding 626105703 LOC116892302 uncharacterized LOC116892302 2 165260018 165282022 - 116892302 MODEL JAAIVD010000001;XR_004386938;XR_004386940 ncrna 626105713 LOC116890629 U2 spliceosomal RNA 1 206465349 206465451 - 116890629 MODEL JAAIVD010000025 pseudo 626105714 LOC116893527 nesprin-1-like 2 198125756 198202312 - 22301074 116893527 MODEL JAAIVD010000001;XM_032895253 XP_032751144 protein-coding 626105736 Hax1 HCLS1 associated protein X-1 ENCODES a protein that exhibits interleukin-1 binding (ortholog); protein domain specific binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); granulocyte colony-stimulating factor signaling pathway (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary sensory neuropathy type 4 (ortholog); neutropenia (ortholog); FOUND IN actin cytoskeleton (ortholog); apical plasma membrane (ortholog); clathrin-coated vesicle (ortholog) 3 63647405 63650837 + 22301074;30032202 116896628 MODEL JAAIVD010000012;XM_032897935;XM_032897936;XM_032897937;XM_032897938 XP_032753826;XP_032753827;XP_032753828;XP_032753829 HCLS1-associated protein X-1 protein-coding 626105754 LOC116885871 speedy protein E4A-like 16 9943767 9947960 - 116885871 MODEL JAAIVD010000004 pseudo 626105755 LOC116900877 olfactory receptor 5W2-like 5 69290837 69291815 + 116900877 MODEL JAAIVD010000023 pseudo 626105756 Onecut1 one cut homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); B cell differentiation (ortholog); cell fate commitment (ortholog); ASSOCIATED WITH polycystic liver disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 69148023 69175439 + 30032202 116907516 MODEL JAAIVD010000027;XM_032910518;XM_032910519 XP_032766409;XP_032766410 hepatocyte nuclear factor 6 protein-coding 626105766 LOC116906162 poly(rC)-binding protein 2-like 7 100739327 100740745 + 116906162 MODEL JAAIVD010000026 pseudo 626105767 Napb NSF attachment protein beta ENCODES a protein that exhibits SNARE binding (ortholog); syntaxin binding (ortholog); INVOLVED IN protein-containing complex disassembly (ortholog); regulation of ATP-dependent activity (ortholog); regulation of receptor internalization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); developmental and epileptic encephalopathy 1 (ortholog); developmental and epileptic encephalopathy 107 (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); neuronal cell body (ortholog) 5 128228331 128267552 - 22301074;30032202 116902077 MODEL JAAIVD010000023;XM_032904368;XM_032904369 XP_032760259;XP_032760260 beta-soluble NSF attachment protein protein-coding 626105784 LOC116895515 galectin-9-like 3 116217854 116218956 + 116895515 MODEL JAAIVD010000012 pseudo 626105785 LOC116884097 small Cajal body-specific RNA 20 14 28096468 28096600 - 116884097 MODEL JAAIVD010000009;XR_004385836 ncrna 626105788 LOC116899755 U6 spliceosomal RNA 4 82934829 82934935 - 116899755 MODEL JAAIVD010000003;XR_004387770 snrna 626105791 Lmo7 LIM domain 7 ENCODES a protein that exhibits actinin binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); cell surface (ortholog) 12 22654542 22788059 - 22301074;30032202 116914033 MODEL JAAIVD010000007;XM_032918301;XM_032918302;XM_032918303;XM_032918304 XP_032774192;XP_032774193;XP_032774194;XP_032774195 LIM domain only protein 7 protein-coding 626105837 LOC116895406 interferon-induced transmembrane protein 2-like 3 60941173 60941688 - 116895406 MODEL JAAIVD010000012 pseudo 626105838 Adgrg3 adhesion G protein-coupled receptor G3 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); B cell differentiation (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 17 1893802 1922381 + 22301074;30032202 116886470 MODEL JAAIVD010000011;XM_032887972;XM_032887973 XP_032743863;XP_032743864 protein-coding 626105859 LOC116895753 breast cancer anti-estrogen resistance protein 3-like 3 37385202 37420474 - 30032202 116895753 MODEL JAAIVD010000012;XM_032896920 XP_032752811 protein-coding 626105865 LOC116893224 cell division cycle-associated protein 4-like 2 114903815 114904520 + 116893224 MODEL JAAIVD010000001 pseudo 626105866 Map3k6 mitogen-activated protein kinase kinase kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); MAP kinase kinase kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH COVID-19 (ortholog) 1 25001798 25013607 - 22301074;30032202 116895263 MODEL JAAIVD010000025;XM_032896584 XP_032752475 protein-coding 626105898 Kcnh1 potassium voltage-gated channel subfamily H member 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); calmodulin binding (ortholog); cyclic nucleotide binding (ortholog); INVOLVED IN cellular response to calcium ion (ortholog); monoatomic ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal adenocarcinoma (ortholog); Developmental Disease (ortholog); FOUND IN axolemma (ortholog); axon (ortholog); cell surface (ortholog) 10 70210416 70508608 + 22301074;30032202 116911409 MODEL JAAIVD010000005;XM_032915372;XM_032915373 XP_032771263;XP_032771264 protein-coding 626105915 LOC116902640 U2 spliceosomal RNA 5 31044181 31044292 + 116902640 MODEL JAAIVD010000023 pseudo 626105916 LOC116897390 U6 spliceosomal RNA 3 7798058 7798164 - 116897390 MODEL JAAIVD010000012;XR_004387434 snrna 626105919 Sipa1l2 signal induced proliferation associated 1 like 2 INVOLVED IN presynaptic signal transduction (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density, intracellular component (ortholog); presynapse (ortholog) 17 44935261 45086248 - 22301074;30032202 116886701 MODEL JAAIVD010000011;XM_032888201;XM_032888202;XM_032888203;XM_032888204 XP_032744092;XP_032744093;XP_032744094;XP_032744095 signal-induced proliferation-associated 1-like protein 2 protein-coding 626105953 LOC116915192 small nucleolar RNA SNORA15 13 10052861 10052987 - 116915192 MODEL JAAIVD010000008;XR_004389848 snorna 626105956 C9H17orf58 chromosome 9 C17orf58 homolog 9 72102827 72107158 - 22301074 116909806 MODEL JAAIVD010000002;XM_032913502 XP_032769393 UPF0450 protein C17orf58 homolog protein-coding 626105964 LOC116888574 uncharacterized LOC116888574 X 65114431 65116575 - 116888574 MODEL JAAIVD010000014;XR_004386322 ncrna 626105968 Galntl5 polypeptide N-acetylgalactosaminyltransferase like 5 ENCODES a protein that exhibits glycosyltransferase activity (ortholog); INVOLVED IN protein glycosylation (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); skin disease (ortholog) 6 154388212 154431960 + 30032202 116904223 MODEL JAAIVD010000024;XM_032907161 XP_032763052 inactive polypeptide N-acetylgalactosaminyltransferase-like protein 5 protein-coding 626105981 LOC116896078 B-cell lymphoma/leukemia 10-like 1 80143661 80144216 + 116896078 MODEL JAAIVD010000025 pseudo 626105982 Micu3 mitochondrial calcium uptake family member 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion sensor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); positive regulation of neurotransmitter secretion (ortholog); FOUND IN mitochondrion (ortholog) 13 47096458 47184934 - 22301074;30032202 116915062 MODEL JAAIVD010000008;XM_032919479;XM_032919480 XP_032775370;XP_032775371 calcium uptake protein 3, mitochondrial protein-coding 626106002 Bud23 BUD23 rRNA methyltransferase and ribosome maturation factor ENCODES a protein that exhibits protein heterodimerization activity (ortholog); rRNA (guanine) methyltransferase activity (ortholog); INVOLVED IN positive regulation of rRNA processing (ortholog); rRNA (guanine-N7)-methylation (ortholog); ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 18977230 18988360 + 22301074;30032202 116885396 MODEL JAAIVD010000004;XM_032886676 XP_032742567 probable 18S rRNA (guanine-N(7))-methyltransferase protein-coding 626106018 LOC116904934 macrophage migration inhibitory factor-like 7 117708994 117709340 - 116904934 MODEL JAAIVD010000026 pseudo 626106019 LOC116887131 40S ribosomal protein S19-like 18 19901326 19901856 - 116887131 MODEL JAAIVD010000013 pseudo 626106020 LOC116883211 60S ribosomal protein L32-like 14 44058984 44079808 + 116883211 MODEL JAAIVD010000009 pseudo 626106021 Zfp92 ZFP92 zinc finger protein ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of glucose metabolic process (ortholog); regulation of lipid metabolic process (ortholog); ASSOCIATED WITH cerebral creatine deficiency syndrome 1 (ortholog); FOUND IN nucleus (ortholog) X 129024704 129045798 + 30032202 116889230 MODEL JAAIVD010000014;XM_032890381 XP_032746272 zinc finger protein 92 homolog protein-coding 626106031 LOC116883257 mitochondrial fission regulator 1-like 14 74360932 74361529 - 116883257 MODEL JAAIVD010000009 pseudo 626106032 LOC116912191 uncharacterized protein C16orf52 homolog B-like 11 92101866 92102373 - 116912191 MODEL JAAIVD010000006 pseudo 626106033 LOC116887823 receptor-binding cancer antigen expressed on SiSo cells-like X 35344254 35344894 + 116887823 MODEL JAAIVD010000014 pseudo 626106034 Pik3ip1 phosphoinositide-3-kinase interacting protein 1 ENCODES a protein that exhibits phosphatidylinositol 3-kinase inhibitor activity (ortholog); INVOLVED IN negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog) 11 72324842 72337177 + 116912853 MODEL JAAIVD010000006;XM_032917069 XP_032772960 phosphoinositide-3-kinase-interacting protein 1 protein-coding 626106044 LOC116900394 olfactory receptor 4P4-like 5 69867250 69868221 + 22301074 116900394 MODEL JAAIVD010000023;XM_032902139 XP_032758030 protein-coding 626106047 LOC116894070 olfactory receptor 51A4-like 2 102935262 102936269 - 22301074 116894070 MODEL JAAIVD010000001;XM_032895793 XP_032751684 protein-coding 626106050 LOC116893155 zinc finger protein 431-like 2 100973685 100982470 - 30032202 116893155 MODEL JAAIVD010000001;XM_032895073 XP_032750964 protein-coding 626106057 Cers2 ceramide synthase 2 ENCODES a protein that exhibits N-acyltransferase activity (ortholog); sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); negative regulation of axon regeneration (ortholog); negative regulation of Schwann cell migration (ortholog); ASSOCIATED WITH Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); sciatic neuropathy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 61925275 61933937 - 22301074;30032202 116896556 MODEL JAAIVD010000012;XM_032897748 XP_032753639 protein-coding 626106072 LOC116888942 phospholipid hydroperoxide glutathione peroxidase-like X 2879582 2880450 - 116888942 MODEL JAAIVD010000014 pseudo 626106073 Defb113 defensin beta 113 4 95986223 95987133 - 22301074 116898099 MODEL JAAIVD010000003;XM_032899483 XP_032755374 beta-defensin 113 protein-coding 626106077 LOC116897618 small nucleolar RNA SNORA17 3 10982872 10982958 + 116897618 MODEL JAAIVD010000012 pseudo 626106078 LOC116908980 olfactory receptor 1 9 31697378 31698337 - 22301074;30032202 116908980 MODEL JAAIVD010000002;XM_032912450 XP_032768341 protein-coding 626106082 Csrnp2 cysteine and serine rich nuclear protein 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); phosphatase binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 1 262598168 262611453 + 30032202 116884034 MODEL JAAIVD010000025;XM_032885277 XP_032741168 cysteine/serine-rich nuclear protein 2 protein-coding 626106091 LOC116892159 transient receptor potential cation channel subfamily M member 4 2 154176158 154206620 + 22301074;30032202 116892159 MODEL JAAIVD010000001;XM_032893655 XP_032749546 protein-coding 626106121 Magix MAGI family member, X-linked X 14451144 14459365 + 22301074 116889182 MODEL JAAIVD010000014;XM_032890345 XP_032746236 PDZ domain-containing protein MAGIX protein-coding 626106131 Cby3 chibby family member 3 INVOLVED IN spermatogenesis (ortholog); FOUND IN sperm annulus (ortholog) 9 33020741 33022640 + 116910263 MODEL JAAIVD010000002;XM_032914147 XP_032770038 protein chibby homolog 3 protein-coding 626106136 LOC116905192 atherin-like 7 91380467 91411930 + 116905192 MODEL JAAIVD010000026;XM_032907985;XR_004388496 XP_032763876 protein-coding 626106144 LOC116900265 olfactory receptor 1030-like 5 63234549 63235472 + 22301074;30032202 116900265 MODEL JAAIVD010000023;XM_032902017 XP_032757908 protein-coding 626106147 Trim62 tripartite motif containing 62 ENCODES a protein that exhibits identical protein binding (ortholog); transcription coactivator activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN innate immune response (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog) 1 29222791 29251280 - 22301074;30032202 116896334 MODEL JAAIVD010000025;XM_032897436 XP_032753327 E3 ubiquitin-protein ligase TRIM62 protein-coding 626106156 LOC116890353 U6 spliceosomal RNA 1 247399391 247399497 - 116890353 MODEL JAAIVD010000025;XR_004386572 snrna 626106159 LOC116903236 ribosome biogenesis protein NSA2 homolog 6 128973791 128974487 - 116903236 MODEL JAAIVD010000024 pseudo 626106160 LOC116898235 uncharacterized LOC116898235 4 150758560 150775772 + 116898235 MODEL JAAIVD010000003;XR_004387646 ncrna 626106165 LOC116902758 platelet glycoprotein 4-like 6 64813696 64839106 - 30032202 116902758 MODEL JAAIVD010000024;XM_032905103;XM_032905104;XM_032905105;XM_032905106 XP_032760994;XP_032760995;XP_032760996;XP_032760997 protein-coding 626106188 LOC116895464 putative heme oxygenase 3 3 84250141 84251041 + 116895464 MODEL JAAIVD010000012 pseudo 626106189 LOC116894435 uncharacterized protein C11orf98 homolog 2 160429816 160430445 - 116894435 MODEL JAAIVD010000001;XM_032896137 XP_032752028 protein-coding 626106194 Rpl23 ribosomal protein L23 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); transcription coactivator binding (ortholog); ubiquitin ligase inhibitor activity (ortholog); INVOLVED IN cellular response to actinomycin D (ortholog); G1 to G0 transition (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ribosome biogenesis pathway; translation pathway; FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 9 56602605 56606343 + 22301074;30032202 116910016 MODEL JAAIVD010000002;XM_032913802 XP_032769693 60S ribosomal protein L23 protein-coding 626106203 Pik3cd phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit delta INVOLVED IN B cell activation (ortholog); B cell homeostasis (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH Chlamydia pneumonia (ortholog); colorectal cancer (ortholog); cutaneous leishmaniasis (ortholog); FOUND IN phosphatidylinositol 3-kinase complex, class IA (ortholog) 1 11092427 11119538 + 22301074;30032202 116892578 MODEL JAAIVD010000025;XM_032894362 XP_032750253 phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform protein-coding 626106231 LOC116900384 olfactory receptor 5I1-like 5 69655031 69655993 + 22301074;30032202 116900384 MODEL JAAIVD010000023;XM_032902131 XP_032758022 protein-coding 626106235 LOC116893519 60S ribosomal protein L12-like 2 192988486 192993664 - 116893519 MODEL JAAIVD010000001 pseudo 626106236 Ttc13 tetratricopeptide repeat domain 13 17 44189554 44245849 - 22301074 116886134 MODEL JAAIVD010000011;XM_032887477;XM_032887478;XM_032887479;XM_032887480;XM_032887481;XM_032887482;XM_032887483;XM_032887484 XP_032743368;XP_032743369;XP_032743370;XP_032743371;XP_032743372;XP_032743373;XP_032743374;XP_032743375 tetratricopeptide repeat protein 13 protein-coding 626106274 LOC116894163 olfactory receptor 2D3-like 2 105047778 105048701 - 22301074 116894163 MODEL JAAIVD010000001;XM_032895880 XP_032751771 protein-coding 626106277 LOC116908351 small nucleolar RNA SNORD16 8 58481580 58481678 + 116908351 MODEL JAAIVD010000027;XR_004388902 snorna 626106280 LOC116893125 metallothionein-1-like 2 75375284 75386782 - 22301074;30032202 116893125 MODEL JAAIVD010000001;XM_032895060 XP_032750951 protein-coding 626106286 Bpifb1 BPI fold containing family B member 1 INVOLVED IN innate immune response in mucosa (ortholog); negative regulation of toll-like receptor 4 signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 5 133526408 133559351 + 22301074;30032202 116900721 MODEL JAAIVD010000023;XM_032902428 XP_032758319 BPI fold-containing family B member 1 protein-coding 626106306 Nup42 nucleoporin 42 ENCODES a protein that exhibits nuclear export signal receptor activity (ortholog); INVOLVED IN protein export from nucleus (ortholog); FOUND IN cytosol (ortholog); nuclear envelope (ortholog); nuclear membrane (ortholog) 6 153367439 153384470 + 22301074;30032202 116904199 MODEL JAAIVD010000024;XM_032907112 XP_032763003 nucleoporin NUP42 protein-coding 626106317 Epyc epiphycan INVOLVED IN articular cartilage development (ortholog); bone development (ortholog); sensory perception of sound (ortholog); FOUND IN extracellular matrix (ortholog) 1 176844227 176875377 + 22301074 116889996 MODEL JAAIVD010000025;XM_032890782 XP_032746673 protein-coding 626106327 Acy1 aminoacylase 1 ENCODES a protein that exhibits aminoacylase activity (ortholog); identical protein binding (ortholog); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); pre-malignant neoplasm (ortholog); renal cell carcinoma (ortholog); FOUND IN extracellular exosome (ortholog) 8 97733310 97737977 - 22301074;30032202 116907481 MODEL JAAIVD010000027;XM_032910467;XM_032910468 XP_032766358;XP_032766359 aminoacylase-1 protein-coding 626106350 LOC116885824 ubiquitin-conjugating enzyme E2 N-like 16 8888395 8896942 - 116885824 MODEL JAAIVD010000004 pseudo 626106351 LOC116905503 uncharacterized LOC116905503 7 129504071 129508563 + 116905503 MODEL JAAIVD010000026;XR_004388546 ncrna 626106356 LOC116894950 small nucleolar RNA SNORA70 2 132769649 132769781 + 116894950 MODEL JAAIVD010000001;XR_004387146 snorna 626106359 LOC116903203 chromobox protein homolog 3-like 6 18685215 18685874 + 22301074;30032202 116903203 MODEL JAAIVD010000024;XM_032905580 XP_032761471 pseudo 626106364 Lamp1 lysosomal associated membrane protein 1 ENCODES a protein that exhibits enzyme binding (ortholog); ion channel inhibitor activity (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagic cell death (ortholog); establishment of protein localization to organelle (ortholog); Golgi to lysosome transport (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Streptococcus pneumonia (ortholog); FOUND IN alveolar lamellar body (ortholog); autolysosome (ortholog); autophagosome membrane (ortholog) 13 70516414 70532976 - 22301074;30032202 116914704 MODEL JAAIVD010000008;XM_032919131 XP_032775022 lysosome-associated membrane glycoprotein 1 protein-coding 626106377 Zfp1 ZFP1 zinc finger protein ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 17 31327228 31358736 + 30032202 116886194 MODEL JAAIVD010000011;XM_032887565;XM_032887566;XM_032887568;XM_032887569;XM_032887570;XM_032887571 XP_032743456;XP_032743457;XP_032743459;XP_032743460;XP_032743461;XP_032743462 zinc finger protein 1 homolog protein-coding 626106399 LOC116886411 zinc finger protein 37A-like 17 26156393 26161396 + 22301074 116886411 MODEL JAAIVD010000011;XM_032887886 XP_032743777 protein-coding 626106407 LOC116892335 zinc finger protein 420-like 2 166213445 166227312 - 22301074 116892335 MODEL JAAIVD010000001;XM_032893969 XP_032749860 protein-coding 626106416 LOC116884891 malignant T-cell-amplified sequence 1-like 15 71633116 71633501 - 116884891 MODEL JAAIVD010000010 pseudo 626106417 LOC116888970 60S ribosomal protein L17-like X 96011224 96011765 - 116888970 MODEL JAAIVD010000014 pseudo 626106418 LOC116906060 histone deacetylase 1-like 7 49896944 49899663 + 22301074 116906060 MODEL JAAIVD010000026;XM_032909098 XP_032764989 protein-coding 626106422 LOC116904519 stress-70 protein, mitochondrial-like 6 7120179 7122190 - 116904519 MODEL JAAIVD010000024 pseudo 626106423 Jam3 junctional adhesion molecule 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN adaptive immune response (ortholog); adherens junction assembly (ortholog); angiogenesis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); autism spectrum disorder (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cell-cell junction (ortholog) 8 22994398 23054310 - 30032202 116906681 MODEL JAAIVD010000027;XM_032909472;XM_032909473 XP_032765363;XP_032765364 junctional adhesion molecule C protein-coding 626106440 Asz1 ankyrin repeat, SAM and basic leucine zipper domain containing 1 INVOLVED IN male meiotic nuclear division (ortholog); spermatogenesis (ortholog); transposable element silencing (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); spermatogenic failure 57 (ortholog); FOUND IN cytoplasm (ortholog); pi-body (ortholog) 6 120873619 120922158 + 22301074;30032202 116902940 MODEL JAAIVD010000024;XM_032905266;XM_032905267 XP_032761157;XP_032761158 ankyrin repeat, SAM and basic leucine zipper domain-containing protein 1 protein-coding 626106462 LOC116903655 glyceraldehyde-3-phosphate dehydrogenase-like 6 64539522 64540515 + 116903655 MODEL JAAIVD010000024 pseudo 626106463 Fen1 flap structure-specific endonuclease 1 ENCODES a protein that exhibits 5'-3' exonuclease activity (ortholog); 5'-flap endonuclease activity (ortholog); DNA binding (ortholog); INVOLVED IN DNA repair (ortholog); DNA replication (ortholog); DNA replication, removal of RNA primer (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); autoimmune disease (ortholog); breast cancer (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 2 9677143 9681870 - 22301074;30032202 116890947 MODEL JAAIVD010000001;XM_032891588;XM_032891589;XM_032891591;XM_032891592 XP_032747479;XP_032747480;XP_032747482;XP_032747483 flap endonuclease 1 protein-coding 626106478 Trpm5 transient receptor potential cation channel subfamily M member 5 ENCODES a protein that exhibits calcium-activated cation channel activity (ortholog); monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); INVOLVED IN monoatomic ion transmembrane transport (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 2 6609117 6631103 + 22301074;30032202 116890835 MODEL JAAIVD010000001;XM_032891359;XM_032891360;XM_032891361 XP_032747250;XP_032747251;XP_032747252 protein-coding 626106516 LOC116912612 histone chaperone ASF1A-like 11 10198531 10199148 + 116912612 MODEL JAAIVD010000006 pseudo 626106517 LOC116887816 tropomyosin alpha-3 chain-like X 31547064 31549944 - 116887816 MODEL JAAIVD010000014 pseudo 626106518 LOC116892576 pregnancy-specific glycoprotein 22-like 2 171984253 171995636 - 30032202 116892576 MODEL JAAIVD010000001;XM_032894356 XP_032750247 protein-coding 626106527 LOC116885646 zinc finger CCHC domain-containing protein 9-like 1 232990913 232991793 + 116885646 MODEL JAAIVD010000025 pseudo 626106528 Flvcr1 FLVCR choline and heme transporter 1 ENCODES a protein that exhibits carboxylic acid transmembrane transporter activity (ortholog); choline transmembrane transporter activity (ortholog); ethanolamine transmembrane transporter activity (ortholog); INVOLVED IN blood vessel development (ortholog); choline transport (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); Diamond-Blackfan anemia (ortholog); fundus dystrophy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 10 69095282 69114731 - 22301074;30032202 116911202 MODEL JAAIVD010000005;XM_032915075;XM_032915076;XR_004389318 XP_032770966;XP_032770967 FLVCR heme transporter 1;feline leukemia virus subgroup C receptor-related protein 1 protein-coding 626106548 Zmym6 zinc finger MYM-type containing 6 INVOLVED IN cytoskeleton organization (ortholog); regulation of cell morphogenesis (ortholog) 1 31157652 31205047 - 22301074 116896467 MODEL JAAIVD010000025;XM_032897632 XP_032753523 zinc finger MYM-type protein 6 protein-coding 626106566 LOC116909866 protein RoBo-1-like 9 39480408 39484565 + 116909866 MODEL JAAIVD010000002;XM_032913594 XP_032769485 protein-coding 626106574 Rims2 regulating synaptic membrane exocytosis 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH CONE-ROD SYNAPTIC DISORDER SYNDROME, CONGENITAL NONPROGRESSIVE (ortholog); Congenital Stationary Night Blindness 2B (ortholog); lung small cell carcinoma (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); inhibitory synapse (ortholog) 1 212712402 213003564 + 30032202 116910894 MODEL JAAIVD010000025;XM_032914664 XP_032770555 regulating synaptic membrane exocytosis protein 2 protein-coding 626106605 LOC116899999 uncharacterized LOC116899999 5 119723515 119765519 + 116899999 MODEL JAAIVD010000023;XR_004387908 ncrna 626106609 LOC116906328 U6 spliceosomal RNA 7 101664807 101664912 - 116906328 MODEL JAAIVD010000026;XR_004388615 snrna 626106612 LOC116885568 activity-dependent neuroprotector homeobox protein 2-like 1 166022229 166025705 + 22301074;30032202 116885568 MODEL JAAIVD010000025;XM_032886865 XP_032742756 protein-coding 626106616 LOC116885953 uncharacterized LOC116885953 16 16990759 16992151 - 116885953 MODEL JAAIVD010000004;XR_004386051;XR_004386052 ncrna 626106623 LOC116888142 actin, clone 302-like X 109165736 109188281 - 116888142 MODEL JAAIVD010000014 pseudo 626106624 Ybx3 Y-box binding protein 3 ENCODES a protein that exhibits DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); cellular hyperosmotic response (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Optic Nerve Injuries (ortholog); FOUND IN bicellular tight junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 16830287 16853589 + 22301074;30032202 116903181 MODEL JAAIVD010000024;XM_032905551 XP_032761442 Y-box-binding protein 3 protein-coding 626106638 LOC116886576 60S ribosomal protein L12-like 1 19743445 19743958 - 116886576 MODEL JAAIVD010000025 pseudo 626106639 Diaph1 diaphanous related formin 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); profilin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament polymerization (ortholog); actin nucleation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness 1 (ortholog); autosomal recessive nonsyndromic deafness 9 (ortholog); benign neonatal seizures (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) 15 6988249 7083665 + 22301074;30032202 116884727 MODEL JAAIVD010000010;XM_032885916;XM_032885917 XP_032741807;XP_032741808 protein diaphanous homolog 1 protein-coding 626106674 LOC116894074 olfactory receptor 51L1 2 103017908 103018855 + 22301074 116894074 MODEL JAAIVD010000001;XM_032895797 XP_032751688 protein-coding 626106677 Prkrip1 PRKR interacting protein 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); protein kinase binding (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN renal system process (ortholog); FOUND IN nucleolus (ortholog) 16 17813791 17831624 + 22301074;30032202 116885624 MODEL JAAIVD010000004;XM_032886926 XP_032742817 PRKR-interacting protein 1 protein-coding 626106687 Otx2 orthodenticle homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); axon guidance (ortholog); ASSOCIATED WITH Anophthalmia (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 6 (ortholog); FOUND IN cytoplasm (ortholog); growth cone (ortholog); nucleus (ortholog) 12 74379903 74384768 + 22301074;30032202 116913419 MODEL JAAIVD010000007;XM_032917604;XM_032917605 XP_032773495;XP_032773496 homeobox protein OTX2 protein-coding 626106696 Tcap titin-cap ENCODES a protein that exhibits BMP binding (ortholog); FATZ binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adult heart development (ortholog); cardiac muscle cell development (ortholog); cardiac muscle contraction (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2G (ortholog); Brugada syndrome (ortholog); cardiomyopathy (ortholog); FOUND IN I band (ortholog); titin-telethonin complex (ortholog); Z disc (ortholog) 9 56009415 56010582 - 30032202 116910132 MODEL JAAIVD010000002;XM_032913967 XP_032769858 telethonin protein-coding 626106702 Ccnq cyclin Q ENCODES a protein that exhibits protein kinase activator activity (ortholog); INVOLVED IN positive regulation of MAPK cascade (ortholog); regulation of cell cycle G2/M phase transition (ortholog); ASSOCIATED WITH lymphopenia (ortholog); neutropenia (ortholog); syndactyly-telecanthus-anogenital and renal malformations syndrome (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog) X 129198868 129207072 - 30032202 116888222 MODEL JAAIVD010000014;XM_032889511 XP_032745402 cyclin-Q protein-coding 626106708 LOC116894595 vomeronasal type-1 receptor 2-like 2 181435589 181436524 + 22301074;30032202 116894595 MODEL JAAIVD010000001;XM_032896312 XP_032752203 protein-coding 626106711 CXHXorf66 chromosome X CXorf66 homolog X 119484173 119497007 - 116888183 MODEL JAAIVD010000014;XM_032889499 XP_032745390 uncharacterized protein CXorf66 homolog protein-coding 626106716 LOC116898342 integrin beta-2-like protein 4 48215527 48252868 + 116898342 MODEL JAAIVD010000003 pseudo 626106717 LOC116889792 olfactory receptor 1013-like 22301074;30032202 116889792 MODEL JAAIVD010000387;XM_032890642 XP_032746533 protein-coding 626106718 LOC116908787 uncharacterized LOC116908787 9 63654560 63656502 + 116908787 MODEL JAAIVD010000002;XR_004389025 ncrna 626106722 LOC116888840 rabenosyn-5-like 1 105467330 105469898 - 116888840 MODEL JAAIVD010000025 pseudo 626106723 LOC116884135 U6 spliceosomal RNA 14 42668349 42668449 + 116884135 MODEL JAAIVD010000009 pseudo 626106724 LOC116904338 fatty acid-binding protein 5-like 6 68279636 68310081 - 116904338 MODEL JAAIVD010000024 pseudo 626106725 Foxl2 forkhead box L2 ENCODES a protein that exhibits cysteine-type endopeptidase regulator activity involved in apoptotic process (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic DNA fragmentation (ortholog); embryonic eye morphogenesis (ortholog); extraocular skeletal muscle development (ortholog); ASSOCIATED WITH blepharophimosis (ortholog); Blepharophimosis Syndrome Type 1 (ortholog); Blepharophimosis Syndrome Type 2 (ortholog); FOUND IN Flemming body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 8 90298833 90301567 + 30032202 116907052 MODEL JAAIVD010000027;XM_032910007 XP_032765898 forkhead box protein L2 protein-coding 626106730 LOC116888516 heterogeneous nuclear ribonucleoproteins C1/C2-like X 21725594 21726700 + 116888516 MODEL JAAIVD010000014 pseudo 626106731 Myg1 MYG1 exonuclease ENCODES a protein that exhibits 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN locomotory exploration behavior (ortholog); mitochondrial RNA metabolic process (ortholog); mRNA processing (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 1 260743834 260751155 - 30032202 116883494 MODEL JAAIVD010000025;XM_032884665 XP_032740556 UPF0160 protein MYG1, mitochondrial protein-coding 626106742 LOC116906146 dnaJ homolog subfamily C member 17-like 7 94550171 94550895 + 116906146 MODEL JAAIVD010000026 pseudo 626106743 LOC116893529 uncharacterized LOC116893529 2 199415009 199426356 + 22301074;30032202 116893529 MODEL JAAIVD010000001;XM_032895255 XP_032751146 uncharacterized protein LOC116893529 protein-coding 626106749 Nppc natriuretic peptide C ENCODES a protein that exhibits guanylate cyclase activator activity (ortholog); hormone activity (ortholog); hormone receptor binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ development (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN C-type natriuretic peptide signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); aortic valve stenosis (ortholog); arteriosclerosis (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog); secretory granule (ortholog) 4 158805104 158809315 - 22301074;30032202 116899595 MODEL JAAIVD010000003;XM_032901536 XP_032757427 C-type natriuretic peptide protein-coding 626106756 Slc30a8 solute carrier family 30 member 8 ENCODES a protein that exhibits protein homodimerization activity (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); insulin processing (ortholog); insulin secretion (ortholog); ASSOCIATED WITH maturity-onset diabetes of the young type 1 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 1 226830416 226864732 + 30032202 116890087 MODEL JAAIVD010000025;XM_032890844 XP_032746735 zinc transporter 8 protein-coding 626106768 Polk DNA polymerase kappa ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH epilepsy (ortholog); glioblastoma (ortholog); Micronuclei, Chromosome-Defective (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 199964247 200022681 + 22301074;30032202 116897274 MODEL JAAIVD010000012;XM_032899005;XM_032899006 XP_032754896;XP_032754897 protein-coding 626106790 LOC116900462 olfactory receptor 4A15-like 5 71236892 71237809 - 22301074 116900462 MODEL JAAIVD010000023;XM_032902202 XP_032758093 protein-coding 626106793 Sdc3 syndecan 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog); regulation of cell migration (ortholog); PARTICIPATES IN melanocortin system pathway; syndecan signaling pathway; ASSOCIATED WITH obesity (ortholog); FOUND IN axon (ortholog); membrane (ortholog); microspike (ortholog) 1 27499382 27532282 - 1556152;30032202 116895807 MODEL JAAIVD010000025;X63143;XM_032896947 CAA44848;XP_032752838 neuroglycan;syndecan-3 protein-coding 626106802 Ndufb11 NADH:ubiquinone oxidoreductase subunit B11 ASSOCIATED WITH genetic disease (ortholog); infantile histiocytoid cardiomyopathy (ortholog); linear skin defects with multiple congenital anomalies 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) X 3225586 3228212 + 116888316 MODEL JAAIVD010000014;XM_032889589 XP_032745480 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial protein-coding 626106809 Fam227b family with sequence similarity 227 member B 5 104413372 104451864 - 116900967 MODEL JAAIVD010000023;XM_032902597 XP_032758488 protein FAM227B protein-coding 626106821 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48656431 48656504 - 116910833 MODEL JAAIVD010000002 trna 626106822 Zdbf2 zinc finger DBF-type containing 2 INVOLVED IN epigenetic programming of gene expression (ortholog); genomic imprinting (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); lung small cell carcinoma (ortholog) 4 137256328 137287080 + 22301074;30032202 116899445 MODEL JAAIVD010000003;XM_032901216 XP_032757107 DBF4-type zinc finger-containing protein 2 protein-coding 626106829 LOC116884431 uncharacterized LOC116884431 15 54808005 54817580 - 116884431 MODEL JAAIVD010000010;XR_004385869 ncrna 626106834 Ncln nicalin ENCODES a protein that exhibits ribosome binding (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein stabilization (ortholog); regulation of protein complex stability (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein-containing complex (ortholog) 1 153392652 153402736 + 22301074;30032202 116904222 MODEL JAAIVD010000025;XM_032907163;XM_032907172 XP_032763054;XP_032763063 protein-coding 626106854 Dpp7 dipeptidyl peptidase 7 ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); INVOLVED IN lysosomal protein catabolic process (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Necrosis (ortholog); FOUND IN Golgi apparatus (ortholog); lysosome (ortholog); vesicle (ortholog) 5 11829421 11833567 + 22301074;30032202 116901307 MODEL JAAIVD010000023;XM_032903109 XP_032759000 dipeptidyl peptidase 2 protein-coding 626106871 LOC116885043 small nucleolar RNA SNORA17 15 50224520 50224650 - 116885043 MODEL JAAIVD010000010;XR_004385929 snorna 626106874 Atp5pd ATP synthase peripheral stalk subunit d ENCODES a protein that exhibits protein-containing complex binding (ortholog); proton-transporting ATP synthase activity, rotational mechanism (ortholog); INVOLVED IN cellular response to peptide (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); congenital hypothyroidism (ortholog); depressive disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 9 68682185 68685419 + 22301074;30032202 116908847 MODEL JAAIVD010000002;XM_032912276;XM_032912277 XP_032768167;XP_032768168 ATP synthase subunit d, mitochondrial protein-coding 626106888 LOC116894009 olfactory receptor 51B6 2 101719981 101720928 - 22301074 116894009 MODEL JAAIVD010000001;XM_032895725 XP_032751616 protein-coding 626106891 LOC116883525 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 4-like 14 41933341 41933482 - 30032202 116883525 MODEL JAAIVD010000009;XM_032884698 XP_032740589 protein-coding 626106896 LOC116903604 eukaryotic translation initiation factor 1-like 6 88346639 88346984 + 116903604 MODEL JAAIVD010000024 pseudo 626106897 LOC116897482 small nucleolar RNA SNORD22 3 90864638 90864765 + 116897482 MODEL JAAIVD010000012;XR_004387506 snorna 626106900 Znf407 zinc finger protein 407 ASSOCIATED WITH genetic disease (ortholog); SHORT STATURE, IMPAIRED INTELLECTUAL DEVELOPMENT, MICROCEPHALY, HYPOTONIA, AND OCULAR ANOMALIES (ortholog); Tsukahara Syndrome (ortholog) 15 47791134 48161895 + 22301074;30032202 116884487 MODEL JAAIVD010000010;XM_032885607;XM_032885608 XP_032741498;XP_032741499 protein-coding 626106916 Akt3 AKT serine/threonine kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein kinase C binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN brain morphogenesis (ortholog); cellular response to insulin stimulus (ortholog); homeostasis of number of cells within a tissue (ortholog); PARTICIPATES IN altered phosphatidylinositol 3-kinase-Akt signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH capillary hemangioma (ortholog); colon cancer (ortholog); complex cortical dysplasia with other brain malformations (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytosol (ortholog) 10 55489521 55771001 - 22301074 116911215 MODEL JAAIVD010000005;XM_032915102;XM_032915104;XM_032915105;XM_032915106;XM_032915107 XP_032770993;XP_032770995;XP_032770996;XP_032770997;XP_032770998 RAC-gamma serine/threonine-protein kinase protein-coding 626106947 LOC116901091 ATP synthase F(0) complex subunit C2, mitochondrial-like 5 154367408 154379156 + 116901091 MODEL JAAIVD010000023 pseudo 626106948 LOC116907054 uncharacterized LOC116907054 8 88044406 88044747 - 116907054 MODEL JAAIVD010000027;XR_004388800 ncrna 626106952 Tbc1d15 TBC1 domain family member 15 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); FOUND IN cytoplasm (ortholog); extracellular region (ortholog) 1 193351462 193406060 - 30032202 116909006 MODEL JAAIVD010000025;XM_032912481 XP_032768372 protein-coding 626106974 LOC116883954 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 14 20266040 20267291 - 116883954 MODEL JAAIVD010000009 pseudo 626106975 Sgcz sarcoglycan zeta ASSOCIATED WITH amphetamine abuse (ortholog); skin disease (ortholog); FOUND IN plasma membrane (ortholog); sarcoglycan complex (ortholog) 13 49557006 49628643 + 22301074;30032202 116914338 MODEL JAAIVD010000008;XM_032918560 XP_032774451 zeta-sarcoglycan protein-coding 626106983 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42448985 42449057 - 116884186 MODEL JAAIVD010000009 trna 626106984 LOC116902670 U6 spliceosomal RNA 5 37866459 37866565 - 116902670 MODEL JAAIVD010000023;XR_004388232 snrna 626106987 LOC116886448 uncharacterized LOC116886448 17 39854418 39862609 - 116886448 MODEL JAAIVD010000011;XR_004386106;XR_004386107 ncrna 626106995 LOC116893379 cation channel sperm-associated protein subunit gamma 2-like 2 166782333 166805101 + 116893379 MODEL JAAIVD010000001 pseudo 626106996 C17H19orf53 chromosome 17 C19orf53 homolog 17 16042365 16046686 + 116886625 MODEL JAAIVD010000011;XM_032888132 XP_032744023 leydig cell tumor 10 kDa protein homolog protein-coding 626107002 LOC116888795 E3 ubiquitin-protein ligase RNF128 X 89951791 90036141 + 116888795 MODEL JAAIVD010000014;XM_032890075;XM_032890076 XP_032745966;XP_032745967 protein-coding 626107012 LOC116912138 60S ribosomal protein L7-like 11 72372897 72373664 + 116912138 MODEL JAAIVD010000006 pseudo 626107013 LOC116901860 creatine kinase U-type, mitochondrial 5 99509320 99515112 + 1859839;30032202 116901860 MODEL JAAIVD010000023;X59737;XM_032904057 CAA42415;XP_032759948 ubiquitous mitochondrial creatine kinase protein-coding 626107026 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 52505493 52505575 - 116911921 MODEL JAAIVD010000005 trna 626107027 LOC116896555 histone-lysine N-methyltransferase SETDB1 3 61893845 61925336 + 22301074;30032202 116896555 MODEL JAAIVD010000012;XM_032897747 XP_032753638 protein-coding 626107053 LOC116890445 small nucleolar RNA SNORD55/SNORD39 1 40779835 40779913 - 116890445 MODEL JAAIVD010000025;XR_004386638 snorna 626107056 Lrrc10b leucine rich repeat containing 10B 2 9926997 9929069 - 22301074 116890953 MODEL JAAIVD010000001;XM_032891603 XP_032747494 leucine-rich repeat-containing protein 10B protein-coding 626107061 Dram2 DNA damage regulated autophagy modulator 2 INVOLVED IN cell population proliferation (ortholog); photoreceptor cell maintenance (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); cone-rod dystrophy 21 (ortholog); fundus dystrophy (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 3 51755136 51777762 - 30032202 116896402 MODEL JAAIVD010000012;XM_032897540;XM_032897541 XP_032753431;XP_032753432 DNA damage-regulated autophagy modulator protein 2 protein-coding 626107077 Ssh3 slingshot protein phosphatase 3 ASSOCIATED WITH intellectual disability (ortholog) 2 3375967 3383615 + 22301074;30032202 116890774 MODEL JAAIVD010000001;XM_032891240;XM_032891241 XP_032747131;XP_032747132 protein phosphatase Slingshot homolog 3 protein-coding 626107097 Sf3b1 splicing factor 3b subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); chronic myelogenous leukemia, BCR-ABL1 positive (ortholog); FOUND IN B-WICH complex (ortholog); catalytic step 2 spliceosome (ortholog); chromatin (ortholog) 4 129447082 129490250 - 30032202 116899388 MODEL JAAIVD010000003;XM_032901108;XM_032901109;XR_004387723;XR_004387724 XP_032756999;XP_032757000 protein-coding 626107134 Tmem69 transmembrane protein 69 FOUND IN mitochondrion (ortholog) 1 40191734 40194572 - 116898371 MODEL JAAIVD010000025;XM_032899681 XP_032755572 protein-coding 626107140 LOC116883961 cubilin-like 14 25398445 25409009 - 116883961 MODEL JAAIVD010000009;XM_032885204 XP_032741095 protein-coding 626107147 Sptssb serine palmitoyltransferase small subunit B ENCODES a protein that exhibits serine C-palmitoyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); endoplasmic reticulum organization (ortholog); sphingolipid biosynthetic process (ortholog); FOUND IN serine palmitoyltransferase complex (ortholog) 3 82950465 82980759 + 30032202 116896784 MODEL JAAIVD010000012;XM_032898244;XM_032898246;XM_032898247;XM_032898248 XP_032754135;XP_032754137;XP_032754138;XP_032754139 protein-coding 626107164 Siae sialic acid acetylesterase ENCODES a protein that exhibits sialate O-acetylesterase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); regulation of immune system process (ortholog); ASSOCIATED WITH autoimmune disease (ortholog); FOUND IN lysosome (ortholog) 8 33774098 33809575 + 30032202 116906658 MODEL JAAIVD010000027;XM_032909443 XP_032765334 sialate O-acetylesterase protein-coding 626107178 Dock1 dedicator of cytokinesis 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN cell migration (ortholog); hematopoietic progenitor cell differentiation (ortholog); positive regulation of epithelial cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); DiGeorge syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 2 66740725 67240629 - 30032202 116891382 MODEL JAAIVD010000001;XM_032892397 XP_032748288 dedicator of cytokinesis protein 1 protein-coding 626107234 LOC116913854 40S ribosomal protein S27-like 12 82659840 82660310 - 116913854 MODEL JAAIVD010000007 pseudo 626107235 LOC116893386 rho guanine nucleotide exchange factor 1-like 2 169780276 169781500 - 116893386 MODEL JAAIVD010000001 pseudo 626107236 LOC116890843 uncharacterized LOC116890843 2 6896376 6899062 + 116890843 MODEL JAAIVD010000001;XR_004386787 ncrna 626107243 Pitpna phosphatidylinositol transfer protein alpha ENCODES a protein that exhibits fatty-acyl-CoA binding (ortholog); lipid binding (ortholog); phosphatidylcholine binding (ortholog); INVOLVED IN axonogenesis (ortholog); phospholipid transport (ortholog); ASSOCIATED WITH chylomicron retention disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 94299115 94340978 + 22301074;30032202 116910173 MODEL JAAIVD010000002;XM_032914033 XP_032769924 phosphatidylinositol transfer protein alpha isoform protein-coding 626107259 LOC116887531 adenosylhomocysteinase-like 18 298203 299467 + 116887531 MODEL JAAIVD010000013 pseudo 626107260 LOC116913934 L-threonine 3-dehydrogenase, mitochondrial 12 60894904 60902979 + 30032202 116913934 MODEL JAAIVD010000007;XM_032918197 XP_032774088 protein-coding 626107272 Ipo5 importin 5 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); NLS-bearing protein import into nucleus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 12 3919916 3957022 - 22301074;30032202 116913291 MODEL JAAIVD010000007;XM_032917417 XP_032773308 importin-5 protein-coding 626107300 LOC116913818 dual specificity protein phosphatase 5 12 67730087 67732500 - 22301074;30032202 116913818 MODEL JAAIVD010000007;XM_032918130 XP_032774021 protein-coding 626107305 Ada adenosine deaminase ENCODES a protein that exhibits 2'-deoxyadenosine deaminase activity (ortholog); adenosine deaminase activity (ortholog); deaminase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); adenosine metabolic process (ortholog); allantoin metabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH adenosine deaminase deficiency (ortholog); asthma (ortholog); autism spectrum disorder (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 154219332 154243553 + 22301074;30032202 116902373 MODEL JAAIVD010000023;XM_032904870 XP_032760761 protein-coding 626107321 LOC116908401 small nucleolar RNA SNORA17 8 92727250 92727383 - 116908401 MODEL JAAIVD010000027;XR_004388945 snorna 626107324 LOC116890039 uncharacterized LOC116890039 1 205361779 205371652 - 116890039 MODEL JAAIVD010000025;XR_004386523 ncrna 626107328 LOC116897925 olfactory receptor 5K1 4 42730989 42731954 - 22301074;30032202 116897925 MODEL JAAIVD010000003;XM_032899325 XP_032755216 protein-coding 626107331 LOC116893160 60S ribosomal protein L11-like 1 15097109 15097645 + 116893160 MODEL JAAIVD010000025 pseudo 626107332 LOC116887878 R3H domain-containing protein 2-like X 48705942 48709175 + 22301074 116887878 MODEL JAAIVD010000014;XM_032889365 XP_032745256 protein-coding 626107337 Rassf10 Ras association domain family member 10 INVOLVED IN positive regulation of neural precursor cell proliferation (ortholog); positive regulation of neurogenesis (ortholog) 2 88563147 88565374 - 22301074 116891643 MODEL JAAIVD010000001;XM_032892871 XP_032748762 ras association domain-containing protein 10 protein-coding 626107342 LOC116883563 histone H2A type 1-B 14 42594514 42595075 + 22301074;30032202 116883563 MODEL JAAIVD010000009;XM_032884744 XP_032740635 protein-coding 626107346 Shisa2 shisa family member 2 INVOLVED IN negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); negative regulation of Wnt signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 64749324 64754900 - 30032202 116913969 MODEL JAAIVD010000007;XM_032918237 XP_032774128 protein shisa-2 homolog protein-coding 626107352 Sprn shadow of prion protein ENCODES a protein that exhibits nucleic acid binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleolus (ortholog) 2 61716849 61720705 + 22301074;30032202 116891349 MODEL JAAIVD010000001;XM_032892341 XP_032748232 protein-coding 626107358 Mtmr1 myotubularin related protein 1 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN phosphatidylinositol dephosphorylation (ortholog); protein destabilization (ortholog); regulation of phosphatidylinositol dephosphorylation (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 15 34670968 34704390 - 22301074;30032202 116884440 MODEL JAAIVD010000010;XM_032885532;XM_032885533 XP_032741423;XP_032741424 myotubularin-related protein 1 protein-coding 626107379 Fosl2 FOS like 2, AP-1 transcription factor subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN alveolar secondary septum development (ortholog); B cell differentiation (ortholog); B cell proliferation (ortholog); ASSOCIATED WITH APLASIA CUTIS-ENAMEL DYSPLASIA SYNDROME (ortholog); colon adenocarcinoma (ortholog); colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 7 22014455 22032039 - 22301074;30032202 116905959 MODEL JAAIVD010000026;XM_032908964 XP_032764855 fos-related antigen 2 protein-coding 626107387 LOC116900217 programmed cell death protein 5-like 5 55987192 55988593 + 22301074;30032202 116900217 MODEL JAAIVD010000023;XM_032901969 XP_032757860 protein-coding 626107391 LOC116910385 spindle and kinetochore-associated protein 2-like 9 87500651 87509835 - 116910385 MODEL JAAIVD010000002 pseudo 626107392 LOC116902480 U6 spliceosomal RNA 5 78701647 78701751 + 116902480 MODEL JAAIVD010000023;XR_004388096 snrna 626107395 LOC116898399 DNA/RNA-binding protein KIN17-like 4 80769160 80771080 + 116898399 MODEL JAAIVD010000003 pseudo 626107396 LOC116906042 HIRA-interacting protein 3-like 7 44361414 44362966 - 116906042 MODEL JAAIVD010000026 pseudo 626107397 Bsg basigin (Ok blood group) ENCODES a protein that exhibits signaling receptor activity (ortholog); virus receptor activity (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); endothelial tube morphogenesis (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); breast ductal carcinoma (ortholog); FOUND IN acrosomal membrane (ortholog); endoplasmic reticulum membrane (ortholog); endosome (ortholog) 1 155161261 155168495 - 30032202 116905678 MODEL JAAIVD010000025;XM_032908665;XM_032908670 XP_032764556;XP_032764561 basigin protein-coding 626107412 LOC116908380 small nucleolar RNA SNORA48 8 42687471 42687612 + 116908380 MODEL JAAIVD010000027;XR_004388927 snorna 626107415 Hdac10 histone deacetylase 10 ENCODES a protein that exhibits deacetylase activity (ortholog); enzyme binding (ortholog); histone deacetylase activity (ortholog); INVOLVED IN homologous recombination (ortholog); macroautophagy (ortholog); negative regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); histone deacetylase complex (ortholog) 1 258427135 258432546 - 30032202 116914959 MODEL JAAIVD010000025;XM_032919376;XM_032919379;XM_032919382;XM_032919385;XM_032919389;XM_032919399 XP_032775267;XP_032775270;XP_032775273;XP_032775276;XP_032775280;XP_032775290 polyamine deacetylase HDAC10 protein-coding 626107455 LOC116891926 tubulin polyglutamylase TTLL13-like 2 119989670 120005150 - 30032202 116891926 MODEL JAAIVD010000001;XM_032893360 XP_032749251 protein-coding 626107473 Cideb cell death inducing DFFA like effector b ENCODES a protein that exhibits identical protein binding (ortholog); lipid transfer activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); COPII-coated vesicle cargo loading (ortholog); execution phase of apoptosis (ortholog); FOUND IN COPII vesicle coat (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 12 69244963 69248728 + 22301074;30032202 116913660 MODEL JAAIVD010000007;XM_032917946 XP_032773837 cell death activator CIDE-B protein-coding 626107482 Lclat1 lysocardiolipin acyltransferase 1 ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); acyltransferase activity (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog) 7 19978976 20108110 - 22301074;30032202 116905946 MODEL JAAIVD010000026;XM_032908940;XM_032908941;XM_032908942;XM_032908943;XM_032908944 XP_032764831;XP_032764832;XP_032764833;XP_032764834;XP_032764835 protein-coding 626107503 LOC116888092 cyclin-dependent kinase 11B-like X 96038318 96040949 + 22301074;30032202 116888092 MODEL JAAIVD010000014;XM_032889459 XP_032745350 protein-coding 626107508 LOC116912322 vomeronasal type-2 receptor 116-like 11 19120888 19127741 - 22301074;30032202 116912322 MODEL JAAIVD010000006;XM_032916355;XM_032916356;XM_032916357;XM_032916358 XP_032772246;XP_032772247;XP_032772248;XP_032772249 protein-coding 626107524 Spata46 spermatogenesis associated 46 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); spermatogenesis (ortholog); FOUND IN nuclear membrane (ortholog) 10 49515786 49519316 + 30032202 116911007 MODEL JAAIVD010000005;XM_032914733 XP_032770624 spermatogenesis-associated protein 46 protein-coding 626107529 LOC116888236 serine protease inhibitor Kazal-type 7 X 6582913 6586379 + 22301074 116888236 MODEL JAAIVD010000014;XM_032889527 XP_032745418 protein-coding 626107535 LOC116903656 sulfotransferase 6B1-like 6 552406 570460 - 22301074;30032202 116903656 MODEL JAAIVD010000024;XM_032906312 XP_032762203 protein-coding 626107543 LOC116906442 small nucleolar RNA SNORA17 7 74244903 74245032 + 116906442 MODEL JAAIVD010000026;XR_004388701 snorna 626107546 LOC116906533 proline-rich protein 23A3-like 8 90204510 90205298 + 116906533 MODEL JAAIVD010000027;XM_032909228 XP_032765119 protein-coding 626107549 Zmat3 zinc finger matrin-type 3 INVOLVED IN positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Nerve Degeneration (ortholog); prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 3 122644891 122670068 + 22301074 116896969 MODEL JAAIVD010000012;XM_032898545;XM_032898547;XM_032898548 XP_032754436;XP_032754438;XP_032754439 zinc finger matrin-type protein 3 protein-coding 626107565 LOC116893994 olfactory receptor 52D1 2 101536167 101537132 - 22301074 116893994 MODEL JAAIVD010000001;XM_032895709 XP_032751600 protein-coding 626107569 LOC116912951 small nucleolar RNA SNORA66 11 17708510 17708639 + 116912951 MODEL JAAIVD010000006;XR_004389518 snorna 626107572 Zbtb38 zinc finger and BTB domain containing 38 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); methyl-CpG binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN DNA modification pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 8 88136702 88190055 - 22301074;30032202 116907071 MODEL JAAIVD010000027;XM_032910027 XP_032765918 zinc finger and BTB domain-containing protein 38 protein-coding 626107578 Snx25 sorting nexin 25 ENCODES a protein that exhibits type I transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); receptor catabolic process (ortholog); FOUND IN endosome (ortholog) 13 41760186 41864233 + 22301074;30032202 116915048 MODEL JAAIVD010000008;XM_032919458;XM_032919459 XP_032775349;XP_032775350 sorting nexin-25 protein-coding 626107604 Cilp2 cartilage intermediate layer protein 2 ENCODES a protein that exhibits alkaline phosphatase activity (ortholog); dinucleotide phosphatase activity (ortholog) 13 12148497 12155423 - 22301074 116914841 MODEL JAAIVD010000008;XM_032919295 XP_032775186 protein-coding 626107616 Atp1b3 ATPase Na+/K+ transporting subunit beta 3 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); P-type sodium:potassium-exchanging transporter activity (ortholog); INVOLVED IN intracellular potassium ion homeostasis (ortholog); intracellular sodium ion homeostasis (ortholog); membrane repolarization (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 8 87777872 87808833 - 22301074;30032202 116907041 MODEL JAAIVD010000027;XM_032909996 XP_032765887 sodium/potassium-transporting ATPase subunit beta-3 protein-coding 626107627 LOC116914784 heat shock cognate 71 kDa protein-like 13 30840813 30842731 - 116914784 MODEL JAAIVD010000008 pseudo 626107628 Smim22 small integral membrane protein 22 INVOLVED IN lipid droplet formation (ortholog); positive regulation of cell migration (ortholog); regulation of actin cytoskeleton organization (ortholog) 9 16900028 16901029 - 30032202 116909082 MODEL JAAIVD010000002;XM_032912557;XM_032912558 XP_032768448;XP_032768449 protein-coding 626107640 LOC116908018 uncharacterized LOC116908018 8 114257099 114258261 + 116908018 MODEL JAAIVD010000027;XR_004388868 ncrna 626107644 Cers6 ceramide synthase 6 ENCODES a protein that exhibits sphingosine N-acyltransferase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); oligodendrocyte development (ortholog); positive regulation of oligodendrocyte apoptotic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); substance-related disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 46191609 46423336 + 22301074;30032202 116901476 MODEL JAAIVD010000023;XM_032903424;XM_032903425 XP_032759315;XP_032759316 protein-coding 626107662 LOC116900633 heat shock cognate 71 kDa protein-like 5 110021775 110026016 - 116900633 MODEL JAAIVD010000023 pseudo 626107663 LOC116899959 60S ribosomal protein L7a-like 5 43678468 43679317 + 116899959 MODEL JAAIVD010000023 pseudo 626107664 Rab35 RAB35, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); cellular response to nerve growth factor stimulus (ortholog); endosomal transport (ortholog); FOUND IN cell projection membrane (ortholog); clathrin-coated endocytic vesicle (ortholog); clathrin-coated pit (ortholog) 16 38178582 38193276 - 22301074;30032202 116885761 MODEL JAAIVD010000004;XM_032887079;XM_032887080 XP_032742970;XP_032742971 ras-related protein Rab-35 protein-coding 626107678 Kcng4 potassium voltage-gated channel modifier subfamily G member 4 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 17 39269523 39279052 - 22301074;30032202 116886555 MODEL JAAIVD010000011;XM_032888071;XM_032888073;XM_032888074 XP_032743962;XP_032743964;XP_032743965 potassium voltage-gated channel subfamily G member 4 protein-coding 626107690 Aspdh aspartate dehydrogenase domain containing 2 155065312 155069756 - 22301074 116892209 MODEL JAAIVD010000001;XM_032893762;XM_032893763;XM_032893764;XM_032893765 XP_032749653;XP_032749654;XP_032749655;XP_032749656 putative L-aspartate dehydrogenase protein-coding 626107709 LOC116898452 T-complex protein 1 subunit eta-like 4 98190506 98193722 + 116898452 MODEL JAAIVD010000003 pseudo 626107710 Erlin2 ER lipid raft associated 2 ENCODES a protein that exhibits ubiquitin protein ligase binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of cholesterol biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 10 (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 13 59479168 59494340 - 22301074;30032202 116914572 MODEL JAAIVD010000008;XM_032918929;XM_032918930;XM_032918931 XP_032774820;XP_032774821;XP_032774822 erlin-2 protein-coding 626107734 LOC116898409 peptidyl-prolyl cis-trans isomerase A-like 4 86883838 86925495 + 116898409 MODEL JAAIVD010000003 pseudo 626107735 Rdh13 retinol dehydrogenase 13 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN eye photoreceptor cell development (ortholog); response to high light intensity (ortholog); retina layer formation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Liver Cirrhosis (ortholog); Necrosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 177031696 177051722 - 22301074 116892650 MODEL JAAIVD010000001;XM_032894471 XP_032750362 protein-coding 626107746 LOC116910218 60S ribosomal protein L13a-like 9 8842501 8843193 - 116910218 MODEL JAAIVD010000002 pseudo 626107747 Arid3a AT-rich interaction domain 3A ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); membrane raft (ortholog); nucleoplasm (ortholog) 1 154923733 154949170 - 22301074;30032202 116905495 MODEL JAAIVD010000025;XM_032908505;XM_032908515;XM_032908525 XP_032764396;XP_032764406;XP_032764416 AT-rich interactive domain-containing protein 3A protein-coding 626107766 Kcnab1 potassium voltage-gated channel subfamily A regulatory beta subunit 1 ENCODES a protein that exhibits alcohol dehydrogenase (NADP+) activity (ortholog); molecular function inhibitor activity (ortholog); NADPH binding (ortholog); INVOLVED IN diaphragm development (ortholog); heart development (ortholog); learning or memory (ortholog); ASSOCIATED WITH hypertension (ortholog); Hypoxia (ortholog); temporal lobe epilepsy (ortholog); FOUND IN axon (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 3 90330622 90609832 - 22301074;30032202 116896815 MODEL JAAIVD010000012;XM_032898291 XP_032754182 potassium voltage-gated channel subfamily A member regulatory beta subunit 1;voltage-gated potassium channel subunit beta-1 protein-coding 626107784 Pla2g12b phospholipase A2 group XIIB INVOLVED IN cholesterol homeostasis (ortholog); low-density lipoprotein particle remodeling (ortholog); triglyceride homeostasis (ortholog) 18 25247418 25269199 + 22301074;30032202 116887343 MODEL JAAIVD010000013;XM_032888937 XP_032744828 group XIIB secretory phospholipase A2-like protein protein-coding 626107792 Cylc2 cylicin 2 INVOLVED IN acrosome assembly (ortholog); maintenance of cell number (ortholog); manchette assembly (ortholog); FOUND IN cytoskeletal calyx (ortholog) 1 103723821 103738709 - 30032202 116899428 MODEL JAAIVD010000025;XM_032901221 XP_032757112 cylicin-2 protein-coding 626107800 Atp5mj ATP synthase membrane subunit j FOUND IN fibrillar center (ortholog); mitochondrion (ortholog); proton-transporting ATP synthase complex (ortholog) 7 129553819 129559342 - 22301074;30032202 116905504 MODEL JAAIVD010000026;XM_032908528 XP_032764419 Atp5mpl ATP synthase membrane subunit 6.8PL;ATP synthase subunit ATP5MPL, mitochondrial protein-coding 626107808 LOC116905629 xanthine dehydrogenase/oxidase-like 7 20516235 20522952 - 22301074;30032202 116905629 MODEL JAAIVD010000026;XM_032908610 XP_032764501 protein-coding 626107814 LOC116906405 small nucleolar RNA SNORD113/SNORD114 family 7 127208186 127208267 + 116906405 MODEL JAAIVD010000026 pseudo 626107815 Slc25a17 solute carrier family 25 member 17 ENCODES a protein that exhibits ADP transmembrane transporter activity (ortholog); AMP transmembrane transporter activity (ortholog); ATP transmembrane transporter activity (ortholog); INVOLVED IN ATP transport (ortholog); fatty acid beta-oxidation (ortholog); fatty acid transport (ortholog); FOUND IN peroxisomal membrane (ortholog); peroxisome (ortholog) 1 251068485 251112737 - 22301074;30032202 116913955 MODEL JAAIVD010000025;XM_032918223 XP_032774114 peroxisomal membrane protein PMP34 protein-coding 626107828 Pknox2 PBX/knotted 1 homeobox 2 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); DNA binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); Familial Prostate Cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); intercellular bridge (ortholog) 8 33067549 33141946 - 30032202 116907748 MODEL JAAIVD010000027;XM_032910886 XP_032766777 homeobox protein PKNOX2 protein-coding 626107842 Acvr1b activin A receptor type 1B ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cardiac fibroblast cell development (ortholog); development of primary female sexual characteristics (ortholog); PARTICIPATES IN activin signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); dextro-looped transposition of the great arteries (ortholog); Helicobacter Infections (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog); plasma membrane (ortholog) 1 261877523 261918154 - 22301074;30032202 116883806 MODEL JAAIVD010000025;XM_032885056 XP_032740947 activin receptor type-1B protein-coding 626107855 LOC116906805 beta-galactosidase-1-like protein 2 8 22796316 22835777 - 22301074;30032202 116906805 MODEL JAAIVD010000027;XM_032909679;XM_032909680 XP_032765570;XP_032765571 protein-coding 626107883 LOC116906366 small nucleolar RNA SNORD113/SNORD114 family 7 127249921 127249995 + 116906366 MODEL JAAIVD010000026;XR_004388635 snorna 626107886 LOC116884655 40S ribosomal protein SA-like 15 38942430 38943324 + 116884655 MODEL JAAIVD010000010 pseudo 626107887 LOC116894350 uncharacterized LOC116894350 2 155290600 155296953 - 116894350 MODEL JAAIVD010000001;XM_032896048;XM_032896049 XP_032751939;XP_032751940 uncharacterized protein LOC116894350 protein-coding 626107895 Tex51 testis expressed 51 15 11778541 11805633 + 116884922 MODEL JAAIVD010000010;XM_032886144 XP_032742035 testis-expressed protein 51 protein-coding 626107905 Rhobtb2 Rho related BTB domain containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 64 (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog) 12 54530760 54550629 + 22301074;30032202 116913376 MODEL JAAIVD010000007;XM_032917545 XP_032773436 rho-related BTB domain-containing protein 2 protein-coding 626107919 Pwwp3a PWWP domain containing 3A, DNA repair factor ENCODES a protein that exhibits nucleosome binding (ortholog); INVOLVED IN chromatin organization (ortholog); DNA repair (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 154637706 154654510 - 30032202 116905254 MODEL JAAIVD010000025;XM_032908108;XM_032908116;XM_032908120;XM_032908128 XP_032763999;XP_032764007;XP_032764011;XP_032764019 PWWP domain-containing DNA repair factor 3A protein-coding 626107945 LOC116897523 small nucleolar RNA SNORA48 3 190700103 190700244 + 116897523 MODEL JAAIVD010000012;XR_004387539 snorna 626107948 Patl2 PAT1 homolog 2 INVOLVED IN negative regulation of cytoplasmic mRNA processing body assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); Oocyte Maturation Defect 2 (ortholog); Oocyte Maturation Defect 4 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); P-body (ortholog) 5 100232788 100240767 - 30032202 116900604 MODEL JAAIVD010000023;XM_032902320 XP_032758211 protein PAT1 homolog 2 protein-coding 626107964 Dkkl1 dickkopf like acrosomal protein 1 INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of testosterone biosynthetic process (ortholog); penetration of zona pellucida (ortholog); FOUND IN acrosomal vesicle (ortholog) 2 154326781 154332066 + 30032202 116894343 MODEL JAAIVD010000001;XM_032896041 XP_032751932 dickkopf-like protein 1 protein-coding 626107973 LOC116886458 ATP synthase subunit f, mitochondrial-like 17 36991323 36992020 + 116886458 MODEL JAAIVD010000011 pseudo 626107974 Atxn7l1 ataxin 7 like 1 7 46499561 46719047 + 116904965 MODEL JAAIVD010000026;XM_032907626;XM_032907627;XM_032907628;XM_032907629;XM_032907630;XM_032907632;XM_032907633;XM_032907634;XM_032907635;XM_032907636 XP_032763517;XP_032763518;XP_032763519;XP_032763520;XP_032763521;XP_032763523;XP_032763524;XP_032763525;XP_032763526;XP_032763527 ataxin-7-like protein 1 protein-coding 626108012 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 61523860 61523928 + 116897671 MODEL JAAIVD010000012 trna 626108013 Ppat phosphoribosyl pyrophosphate amidotransferase ENCODES a protein that exhibits amidophosphoribosyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Experimental Liver Neoplasms (ortholog); hepatocellular carcinoma (ortholog) 11 33664751 33698961 - 22301074;30032202 116912521 MODEL JAAIVD010000006;XM_032916612 XP_032772503 amidophosphoribosyltransferase protein-coding 626108028 Nob1 NIN1 (RPN12) binding protein 1 homolog ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN visual perception (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Hearing Loss, Noise-Induced (ortholog) 17 27141607 27154001 - 22301074;30032202 116886355 MODEL JAAIVD010000011;XM_032887808 XP_032743699 RNA-binding protein NOB1 protein-coding 626108041 Spata31f3 SPATA31 subfamily F member 3 1 3640334 3646584 + 116885934 MODEL JAAIVD010000025;XM_032887249;XM_032887256 XP_032743140;XP_032743147 Fam205c family with sequence similarity 205 member C;protein FAM205C protein-coding 626108054 LOC116893281 Y-box-binding protein 1-like 2 147529219 147545877 - 116893281 MODEL JAAIVD010000001 pseudo 626108055 Sp6 Sp6 transcription factor INVOLVED IN epithelial to mesenchymal transition (ortholog); odontogenesis (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1K (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 9 57362636 57368202 - 30032202 116910223 MODEL JAAIVD010000002;XM_032914112 XP_032770003 transcription factor Sp6 protein-coding 626108061 LOC116908358 5.8S ribosomal RNA 8 560396 560548 - 116908358 MODEL JAAIVD010000027;XR_004388908 rrna 626108064 LOC116904694 small nucleolar RNA SNORA48 6 29357207 29357346 - 116904694 MODEL JAAIVD010000024;XR_004388390 snorna 626108067 Ndufaf1 NADH:ubiquinone oxidoreductase complex assembly factor 1 INVOLVED IN chaperone-mediated protein complex assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH COVID-19 (ortholog); mitochondrial complex I deficiency (ortholog); nuclear type mitochondrial complex I deficiency 1 (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 5 97827227 97832616 - 30032202 116901817 MODEL JAAIVD010000023;XM_032903974 XP_032759865 complex I intermediate-associated protein 30, mitochondrial protein-coding 626108075 LOC116888198 small nuclear ribonucleoprotein-associated protein N-like 1 74118983 74119608 - 22301074;30032202 116888198 MODEL JAAIVD010000025;XM_032889504 XP_032745395 protein-coding 626108079 Irf2bp2 interferon regulatory factor 2 binding protein 2 ENCODES a protein that exhibits transcription corepressor activity (ortholog); INVOLVED IN immature B cell differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); common variable immunodeficiency 14 (ortholog); Immune Deficiency, Familial Variable (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 46097243 46100185 - 30032202 116886218 MODEL JAAIVD010000011;XM_032887610 XP_032743501 interferon regulatory factor 2-binding protein 2 protein-coding 626108085 Cldn25 claudin 25 FOUND IN tight junction (ortholog) 8 43537359 43538048 - 30032202 116908141 MODEL JAAIVD010000027;XM_032911435 XP_032767326 putative claudin-25 protein-coding 626108088 Trnan-guu transfer RNA asparagine (anticodon GUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 4637232 4637305 + 116886018 MODEL JAAIVD010000004 trna 626108089 LOC116911416 40S ribosomal protein S25-like 1 228293563 228293993 + 116911416 MODEL JAAIVD010000025 pseudo 626108090 Calhm2 calcium homeostasis modulator family member 2 INVOLVED IN ATP export (ortholog); calcium ion import (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH dementia (ortholog); depressive disorder (ortholog); FOUND IN plasma membrane (ortholog) 2 46663967 46669732 - 30032202 116891265 MODEL JAAIVD010000001;XM_032892154 XP_032748045 calcium homeostasis modulator protein 2 protein-coding 626108097 LOC116886688 uncharacterized LOC116886688 17 38933207 38933838 - 116886688 MODEL JAAIVD010000011;XR_004386123 ncrna 626108101 LOC116888153 immunoglobulin superfamily member 1-like X 113051824 113053792 + 116888153 MODEL JAAIVD010000014;XM_032889480 XP_032745371 protein-coding 626108106 LOC116903224 sentrin-specific protease 2-like 6 19493206 19494610 + 116903224 MODEL JAAIVD010000024 pseudo 626108107 LOC116906350 small nucleolar RNA SNORD113/SNORD114 family 7 127210457 127210537 + 116906350 MODEL JAAIVD010000026 pseudo 626108108 LOC116906811 mitochondrial import inner membrane translocase subunit Tim8 A-like 1 155738369 155738730 - 116906811 MODEL JAAIVD010000025 pseudo 626108109 LOC116894535 low molecular weight phosphotyrosine protein phosphatase-like 2 176165533 176165964 - 22301074 116894535 MODEL JAAIVD010000001;XM_032896239 XP_032752130 protein-coding 626108112 Tox2 TOX high mobility group box family member 2 ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN female gonad development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); response to gonadotropin (ortholog); FOUND IN nucleoplasm (ortholog) 5 154663143 154787094 - 30032202 116902385 MODEL JAAIVD010000023;XM_032904898;XM_032904899;XM_032904900;XM_032904901 XP_032760789;XP_032760790;XP_032760791;XP_032760792 protein-coding 626108135 S100b S100 calcium binding protein B ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); astrocyte differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytoplasm (ortholog) 8 106863272 106871758 - 22301074;30032202 116907866 MODEL JAAIVD010000027;XM_032911052;XM_032911053;XM_032911054 XP_032766943;XP_032766944;XP_032766945 protein S100-B protein-coding 626108148 Arih1 ariadne RBR E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH aortic aneurysm (ortholog); thoracic aortic aneurysm (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog) 8 53221123 53321098 - 22301074;30032202 116906708 MODEL JAAIVD010000027;XM_032909512;XM_032909513 XP_032765403;XP_032765404 E3 ubiquitin-protein ligase ARIH1 protein-coding 626108170 Cercam cerebral endothelial cell adhesion molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cell adhesion (ortholog) 5 6851518 6864149 - 116901208 MODEL JAAIVD010000023;XM_032902926 XP_032758817 inactive glycosyltransferase 25 family member 3 protein-coding 626108186 LOC116890280 class A basic helix-loop-helix protein 9-like 1 21393244 21393870 - 116890280 MODEL JAAIVD010000025;XM_032890992 XP_032746883 protein-coding 626108189 LOC116901725 uncharacterized LOC116901725 1 95700398 95711199 - 116901725 MODEL JAAIVD010000025;XR_004388013 ncrna 626108193 LOC116913697 olfactory receptor 11H7-like 12 72643654 72644595 - 22301074 116913697 MODEL JAAIVD010000007;XM_032917993 XP_032773884 protein-coding 626108196 LOC116912569 estrogen sulfotransferase 11 81625881 81645855 - 22301074;30032202 116912569 MODEL JAAIVD010000006;XM_032916682 XP_032772573 protein-coding 626108208 LOC116907876 voltage-dependent anion-selective channel protein 2-like 8 108731472 108732374 - 116907876 MODEL JAAIVD010000027 pseudo 626108209 LOC116883169 tubulin beta-2B chain 14 52694960 52698113 - 22301074;30032202 116883169 MODEL JAAIVD010000009;XM_032884206 XP_032740097 protein-coding 626108217 Tex35 testis expressed 35 FOUND IN microtubule cytoskeleton (ortholog); nucleus (ortholog) 10 36443143 36455203 - 116911300 MODEL JAAIVD010000005;XM_032915212;XM_032915213;XM_032915214;XM_032915215 XP_032771103;XP_032771104;XP_032771105;XP_032771106 testis-expressed protein 35 protein-coding 626108237 Spata21 spermatogenesis associated 21 ASSOCIATED WITH Liver Neoplasms (ortholog); polycystic ovary syndrome (ortholog) 1 17032537 17057815 - 22301074;30032202 116893454 MODEL JAAIVD010000025;XM_032895219 XP_032751110 spermatogenesis-associated protein 21 protein-coding 626108255 LOC116893260 protein PRRC2C-like 2 137458488 137459839 + 116893260 MODEL JAAIVD010000001 pseudo 626108256 Oma1 OMA1 zinc metallopeptidase ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); INVOLVED IN cellular response to stress (ortholog); cristae formation (ortholog); diet induced thermogenesis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog) 1 51200981 51255673 - 22301074;30032202 116899492 MODEL JAAIVD010000025;XM_032901328;XM_032901338;XM_032901346 XP_032757219;XP_032757229;XP_032757237 metalloendopeptidase OMA1, mitochondrial protein-coding 626108275 Wsb1 WD repeat and SOCS box containing 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein aggregate center assembly (ortholog); protein K27-linked ubiquitination (ortholog); FOUND IN cytoplasm (ortholog) 9 91177853 91193610 + 22301074 116908723 MODEL JAAIVD010000002;XM_032912063;XM_032912064;XM_032912065;XM_032912067 XP_032767954;XP_032767955;XP_032767956;XP_032767958 WD repeat and SOCS box-containing protein 1 protein-coding 626108298 Crat carnitine O-acetyltransferase ENCODES a protein that exhibits acyl-CoA oxidase activity (ortholog); carnitine O-acetyltransferase activity (ortholog); INVOLVED IN carnitine metabolic process, CoA-linked (ortholog); fatty acid beta-oxidation using acyl-CoA oxidase (ortholog); fatty acid metabolic process (ortholog); PARTICIPATES IN adrenoleukodystrophy pathway; carnitine-acylcarnitine translocase deficiency; fatty acid beta degradation pathway; ASSOCIATED WITH Carnitine Acetyltransferase Deficiency (ortholog); neurodegeneration with brain iron accumulation (ortholog); Neurodegeneration with Brain Iron Accumulation 8 (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) 5 5215081 5228951 + 30032202 116901179 MODEL JAAIVD010000023;XM_032902847;XM_032902848;XM_032902849;XM_032902850;XM_032902851 XP_032758738;XP_032758739;XP_032758740;XP_032758741;XP_032758742 protein-coding 626108328 Syvn1 synoviolin 1 ENCODES a protein that exhibits ATPase binding (ortholog); DNA-binding transcription factor binding (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN ERAD pathway (ortholog); immature B cell differentiation (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN Derlin-1 retrotranslocation complex (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum quality control compartment (ortholog) 2 1637947 1645029 - 30032202 116890682 MODEL JAAIVD010000001;XM_032891089;XM_032891091 XP_032746980;XP_032746982 E3 ubiquitin-protein ligase synoviolin protein-coding 626108352 Afap1 actin filament associated protein 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); SH2 domain binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); lactation (ortholog); lipid biosynthetic process (ortholog); ASSOCIATED WITH open-angle glaucoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); cytosol (ortholog) 11 69079673 69188374 - 30032202 116912862 MODEL JAAIVD010000006;XM_032917078 XP_032772969 actin filament-associated protein 1 protein-coding 626108374 Sfrp1 secreted frizzled related protein 1 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); frizzled binding (ortholog); heparin binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); diastolic heart failure (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); extracellular matrix (ortholog) 13 62983396 63019561 - 30032202 116914719 MODEL JAAIVD010000008;XM_032919148 XP_032775039 secreted frizzled-related protein 1 protein-coding 626108381 LOC116886855 olfactory receptor 2H2 18 10075582 10076514 - 22301074 116886855 MODEL JAAIVD010000013;XM_032888311 XP_032744202 protein-coding 626108384 LOC116899828 small nucleolar RNA SNORA51 4 2473467 2473598 - 116899828 MODEL JAAIVD010000003;XR_004387828 snorna 626108387 Umps uridine monophosphate synthetase ENCODES a protein that exhibits identical protein binding (ortholog); orotate phosphoribosyltransferase activity (ortholog); orotidine-5'-phosphate decarboxylase activity (ortholog); INVOLVED IN 'de novo' UMP biosynthetic process (ortholog); cellular response to xenobiotic stimulus (ortholog); female pregnancy (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; de novo pyrimidine biosynthetic pathway; dihydropyrimidinase deficiency pathway; ASSOCIATED WITH beta thalassemia (ortholog); Breast Neoplasms (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 18753946 18764683 - 22301074;30032202 116898798 MODEL JAAIVD010000003;XM_032900149 XP_032756040 uridine 5'-monophosphate synthase protein-coding 626108397 LOC116908931 keratin-associated protein 2-1-like 9 54446889 54447592 - 116908931 MODEL JAAIVD010000002;XM_032912389 XP_032768280 protein-coding 626108401 LOC116887977 testis-specific protein TSX X 68384313 68391134 - 116887977 MODEL JAAIVD010000014;XM_032889415 XP_032745306 protein-coding 626108409 LOC116894862 U6 spliceosomal RNA 2 156289934 156290033 - 116894862 MODEL JAAIVD010000001 pseudo 626108410 LOC116912924 U6 spliceosomal RNA 11 22714183 22714286 + 116912924 MODEL JAAIVD010000006;XR_004389495 snrna 626108413 LOC116898287 40S ribosomal protein S19-like 4 174826221 174826724 + 116898287 MODEL JAAIVD010000003 pseudo 626108414 LOC116895720 heat shock cognate 71 kDa protein-like 3 222350777 222352691 - 116895720 MODEL JAAIVD010000012 pseudo 626108415 LOC116886683 uncharacterized LOC116886683 17 15135045 15139439 + 116886683 MODEL JAAIVD010000011;XR_004386119;XR_004386120;XR_004386121;XR_004386122 ncrna 626108427 Mrpl39 mitochondrial ribosomal protein L39 ASSOCIATED WITH Combined Oxidative Phosphorylation Deficiency 59 (ortholog); Leigh disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 4 57522875 57538266 + 22301074;30032202 116899039 MODEL JAAIVD010000003;XM_032900504 XP_032756395 39S ribosomal protein L39, mitochondrial protein-coding 626108441 LOC116910322 keratin-associated protein 16-1-like 9 54690663 54693258 + 22301074;30032202 116910322 MODEL JAAIVD010000002;XM_032914184 XP_032770075 protein-coding 626108445 Mapkbp1 mitogen-activated protein kinase binding protein 1 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of defense response to bacterium (ortholog); negative regulation of interleukin-8 production (ortholog); ASSOCIATED WITH genetic disease (ortholog); nephronophthisis 20 (ortholog); FOUND IN cytoplasm (ortholog); mitotic spindle pole (ortholog); nucleolus (ortholog) 5 98130692 98179987 + 22301074 116901824 MODEL JAAIVD010000023;XM_032903984;XM_032903985 XP_032759875;XP_032759876 mitogen-activated protein kinase-binding protein 1 protein-coding 626108481 LOC116895222 40S ribosomal protein S19-like 3 17755888 17764191 + 116895222 MODEL JAAIVD010000012 pseudo 626108482 Dip2c disco interacting protein 2 homolog C ASSOCIATED WITH genetic disease (ortholog); lung small cell carcinoma (ortholog); Neurodevelopmental Disorders (ortholog) 14 23187786 23338733 + 116883384 MODEL JAAIVD010000009;XM_032884503;XM_032884504 XP_032740394;XP_032740395 disco-interacting protein 2 homolog C protein-coding 626108525 Fas Fas cell surface death receptor ENCODES a protein that exhibits calmodulin binding (ortholog); identical protein binding (ortholog); kinase binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); apoptotic signaling pathway (ortholog); PARTICIPATES IN extrinsic apoptotic pathway; FasL mediated signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); FOUND IN apical dendrite (ortholog); apical plasma membrane (ortholog); CD95 death-inducing signaling complex (ortholog) 2 33897209 33930625 + 22301074;30032202 116891103 MODEL JAAIVD010000001;XM_032891816 XP_032747707 tumor necrosis factor receptor superfamily member 6 protein-coding 626108538 Ing5 inhibitor of growth family member 5 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA replication-dependent chromatin disassembly (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of fibroblast proliferation (ortholog); FOUND IN histone acetyltransferase complex (ortholog); MOZ/MORF histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) 4 165717255 165732043 + 30032202 116899673 MODEL JAAIVD010000003;XM_032901691;XM_032901692 XP_032757582;XP_032757583 inhibitor of growth protein 5 protein-coding 626108554 Zfp36l2 ZFP36 ring finger protein like 2 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); COVID-19 (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 13 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 8753221 8757397 + 22301074;30032202 116905782 MODEL JAAIVD010000026;XM_032908757 XP_032764648 mRNA decay activator protein ZFP36L2 protein-coding 626108560 LOC116915080 STAM-binding protein-like 13 28192819 28193625 - 116915080 MODEL JAAIVD010000008 pseudo 626108561 Txnl4b thioredoxin like 4B FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 17 29287978 29293338 + 22301074;30032202 116886695 MODEL JAAIVD010000011;XM_032888193 XP_032744084 thioredoxin-like protein 4B protein-coding 626108568 LOC116884146 small nucleolar RNA SNORA2/SNORA34 family 14 41320868 41321004 + 116884146 MODEL JAAIVD010000009;XR_004385862 snorna 626108571 LOC116887758 U6 spliceosomal RNA 18 10274333 10274438 + 116887758 MODEL JAAIVD010000013;XR_004386258 snrna 626108574 Ttf1 transcription termination factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); termination of RNA polymerase I transcription (ortholog); transcription by RNA polymerase I (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; ASSOCIATED WITH congenital nongoitrous hypothyroidism 2 (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); lung adenocarcinoma (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 5 7598132 7620283 - 116901221 MODEL JAAIVD010000023;XM_032902946 XP_032758837 protein-coding 626108589 LOC116895087 small nucleolar RNA SNORA11 2 179143471 179143597 - 116895087 MODEL JAAIVD010000001;XR_004387254 snorna 626108592 LOC116893859 olfactory receptor 13A1-like 2 61587611 61588540 + 22301074 116893859 MODEL JAAIVD010000001;XM_032895579 XP_032751470 protein-coding 626108595 LOC116909267 olfactory receptor 1361-like 9 38647466 38648428 - 22301074;30032202 116909267 MODEL JAAIVD010000002;XM_032912794 XP_032768685 protein-coding 626108598 Agbl2 AGBL carboxypeptidase 2 ENCODES a protein that exhibits metallocarboxypeptidase activity (ortholog); INVOLVED IN protein side chain deglutamylation (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 5 64955704 64991882 + 22301074 116901599 MODEL JAAIVD010000023;XM_032903624;XM_032903625 XP_032759515;XP_032759516 ATP/GTP binding protein like 2;cytosolic carboxypeptidase 2 protein-coding 626108622 LOC116897923 60S ribosomal protein L29-like 4 19512501 19512971 - 116897923 MODEL JAAIVD010000003 pseudo 626108623 Cavin2 caveolae associated protein 2 ENCODES a protein that exhibits phosphatidylserine binding (ortholog); INVOLVED IN plasma membrane tubulation (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 124125993 124139205 - 30032202 116899378 MODEL JAAIVD010000003;XM_032901095 XP_032756986 caveolae-associated protein 2 protein-coding 626108629 LOC116910669 U1 spliceosomal RNA 9 85550589 85550758 - 116910669 MODEL JAAIVD010000002;XR_004389201 snrna 626108632 LOC116908991 olfactory receptor 139 9 92925694 92926641 - 22301074;30032202 116908991 MODEL JAAIVD010000002;XM_032912460 XP_032768351 protein-coding 626108635 LOC116913863 60S ribosomal protein L24-like 12 2392366 2392873 + 116913863 MODEL JAAIVD010000007 pseudo 626108636 LOC116904161 zinc finger protein 431-like 1 153190325 153195046 - 30032202 116904161 MODEL JAAIVD010000025;XM_032907062 XP_032762953 protein-coding 626108644 LOC116890446 small nucleolar RNA SNORD103/SNORD85 1 27549746 27549828 - 116890446 MODEL JAAIVD010000025;XR_004386639 snorna 626108647 Csrnp1 cysteine and serine rich nuclear protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN face morphogenesis (ortholog); platelet-derived growth factor receptor signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH COVID-19 (ortholog); dilated cardiomyopathy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN nucleus (ortholog) 8 111215505 111227200 - 30032202 116907928 MODEL JAAIVD010000027;XM_032911141 XP_032767032 cysteine/serine-rich nuclear protein 1 protein-coding 626108656 Vtn vitronectin ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); heparin binding (ortholog); INVOLVED IN cell adhesion mediated by integrin (ortholog); cell migration (ortholog); cell-matrix adhesion (ortholog); PARTICIPATES IN forkhead class A signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Alveolar Bone Loss (ortholog); Churg-Strauss syndrome (ortholog); coronary artery disease (ortholog); FOUND IN basement membrane (ortholog); endoplasmic reticulum (ortholog); extracellular matrix (ortholog) 9 91940483 91943634 - 22301074;30032202 116909246 MODEL JAAIVD010000002;XM_032912770 XP_032768661 protein-coding 626108667 LOC116907115 olfactory receptor 7G2-like 8 75751503 75752477 - 22301074;30032202 116907115 MODEL JAAIVD010000027;XM_032910089 XP_032765980 protein-coding 626108670 Plcxd2 phosphatidylinositol specific phospholipase C X domain containing 2 4 30687410 30739690 - 22301074 116898883 MODEL JAAIVD010000003;XM_032900257;XM_032900258 XP_032756148;XP_032756149 PI-PLC X domain-containing protein 2 protein-coding 626108682 Hspb8 heat shock protein family B (small) member 8 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cellular response to unfolded protein (ortholog); positive regulation of aggrephagy (ortholog); ASSOCIATED WITH autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease axonal type 2L (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 16 37411581 37426659 + 30032202 116885686 MODEL JAAIVD010000004;XM_032886993 XP_032742884 heat shock protein beta-8 protein-coding 626108689 Sfpq splicing factor proline and glutamine rich ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); chromatin remodeling (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); human immunodeficiency virus infectious disease (ortholog); skin disease (ortholog); FOUND IN chromatin (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) 1 31246424 31261660 - 22301074;30032202 116896500 MODEL JAAIVD010000025;XM_032897679;XM_032897688;XM_032897695 XP_032753570;XP_032753579;XP_032753586 splicing factor, proline- and glutamine-rich protein-coding 626108713 Trim42 tripartite motif containing 42 8 88748174 88768672 - 22301074 116908100 MODEL JAAIVD010000027;XM_032911379 XP_032767270 tripartite motif-containing protein 42 protein-coding 626108722 Ninj1 ninjurin 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell-cell adhesion mediator activity (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN cell adhesion (ortholog); cellular hyperosmotic response (ortholog); chemotaxis (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); COVID-19 (ortholog); FOUND IN extracellular region (ortholog); filopodium membrane (ortholog); plasma membrane (ortholog) 14 68171026 68179742 + 22301074;30032202 116883816 MODEL JAAIVD010000009;XM_032885066 XP_032740957 ninjurin-1 protein-coding 626108730 Ap4s1 adaptor related protein complex 4 subunit sigma 1 ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 52 (ortholog); FOUND IN AP-4 adaptor complex (ortholog) 7 65126032 65168887 + 22301074;30032202 116905036 MODEL JAAIVD010000026;XM_032907718 XP_032763609 AP-4 complex subunit sigma-1 protein-coding 626108740 Gp6 glycoprotein VI platelet ENCODES a protein that exhibits collagen binding (ortholog); collagen receptor activity (ortholog); protein tyrosine kinase binding (ortholog); INVOLVED IN collagen-activated signaling pathway (ortholog); collagen-activated tyrosine kinase receptor signaling pathway (ortholog); platelet aggregation (ortholog); PARTICIPATES IN platelet aggregation pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); acute myocardial infarction (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN cell surface (ortholog); membrane raft (ortholog); plasma membrane (ortholog) 2 176955463 176993704 - 116893445 MODEL JAAIVD010000001;XM_032895212 XP_032751103 platelet glycoprotein VI protein-coding 626108750 LOC116912030 L-lactate dehydrogenase A chain-like 11 75621677 75623080 + 116912030 MODEL JAAIVD010000006 pseudo 626108751 LOC116884693 60S acidic ribosomal protein P0-like 15 2676321 2677225 + 116884693 MODEL JAAIVD010000010 pseudo 626108752 Bckdk branched chain keto acid dehydrogenase kinase ENCODES a protein that exhibits [3-methyl-2-oxobutanoate dehydrogenase (acetyl-transferring)] kinase activity (ortholog); ATP binding (ortholog); protein kinase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); L-isoleucine catabolic process (ortholog); L-leucine catabolic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); branched-chain keto acid dehydrogenase kinase deficiency (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); oxoglutarate dehydrogenase complex (ortholog) 2 73995552 74000712 - 30032202 116891448 MODEL JAAIVD010000001;XM_032892514 XP_032748405 3-methyl-2-oxobutanoate dehydrogenase [lipoamide] kinase, mitochondrial protein-coding 626108767 LOC116890839 potassium voltage-gated channel subfamily KQT member 1 2 6435540 6595471 - 22301074;30032202 116890839 MODEL JAAIVD010000001;XM_032891367 XP_032747258 protein-coding 626108782 Grk4 G protein-coupled receptor kinase 4 ENCODES a protein that exhibits rhodopsin kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); G protein-coupled receptor internalization (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN calcium signaling pathway via the calcium-sensing receptor; kinin signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Diabetic Nephropathies (ortholog); essential hypertension (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 11 70325137 70397352 - 22301074;30032202 116911940 MODEL JAAIVD010000006;XM_032915835;XM_032915836;XM_032915838;XM_032915839 XP_032771726;XP_032771727;XP_032771729;XP_032771730 protein-coding 626108807 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 33505318 33505389 - 116911911 MODEL JAAIVD010000005 trna 626108808 Slc46a2 solute carrier family 46 member 2 ENCODES a protein that exhibits cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); negative regulation of T cell apoptotic process (ortholog); positive regulation of nucleotide-binding oligomerization domain containing 1 signaling pathway (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 1 91501169 91509106 + 22301074;30032202 116888443 MODEL JAAIVD010000025;XM_032889722 XP_032745613 thymic stromal cotransporter homolog protein-coding 626108816 LOC116895940 calponin-3-like 3 132886924 132887685 + 116895940 MODEL JAAIVD010000012 pseudo 626108817 LOC116898214 40S ribosomal protein S10-like 4 145625482 145625965 + 116898214 MODEL JAAIVD010000003 pseudo 626108818 Sytl4 synaptotagmin like 4 ENCODES a protein that exhibits neurexin family protein binding (ortholog); phospholipid binding (ortholog); INVOLVED IN exocytosis (ortholog); lysosome localization (ortholog); multivesicular body sorting pathway (ortholog); FOUND IN apical plasma membrane (ortholog); endosome (ortholog); plasma membrane (ortholog) X 86255478 86304362 - 22301074;30032202 116888975 MODEL JAAIVD010000014;XM_032890198 XP_032746089 synaptotagmin-like protein 4 protein-coding 626108840 LOC116906368 small nucleolar RNA SNORD113/SNORD114 family 7 127257785 127257859 + 116906368 MODEL JAAIVD010000026;XR_004388637 snorna 626108843 LOC116898967 biotin--protein ligase 4 50403456 50507140 + 22301074;30032202 116898967 MODEL JAAIVD010000003;XM_032900392 XP_032756283 protein-coding 626108853 G6pc1 glucose-6-phosphatase catalytic subunit 1 ENCODES a protein that exhibits glucose-6-phosphatase activity (ortholog); phosphate ion binding (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cholesterol homeostasis (ortholog); gluconeogenesis (ortholog); PARTICIPATES IN altered galactose metabolic pathway; Fanconi syndrome pathway; forkhead class A signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Dwarfism (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 9 60665700 60677140 + 22301074;30032202 116909320 MODEL JAAIVD010000002;XM_032912858;XM_032912859 XP_032768749;XP_032768750 G6pc glucose-6-phosphatase protein-coding 626108866 Bpifa2 BPI fold containing family A member 2 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); secretory granule (ortholog) 5 133345599 133353690 + 22301074 116900714 MODEL JAAIVD010000023;XM_032902420 XP_032758311 BPI fold-containing family A member 2 protein-coding 626108879 Stox1 storkhead box 1 ENCODES a protein that exhibits RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to nitrosative stress (ortholog); inner ear development (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); pre-eclampsia (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 18 28479797 28541079 - 30032202 116887263 MODEL JAAIVD010000013;XM_032888830 XP_032744721 storkhead-box protein 1 protein-coding 626108886 Wrap53 WD repeat containing antisense to TP53 ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); protein carrier chaperone (ortholog); INVOLVED IN Cajal body organization (ortholog); positive regulation of DNA repair (ortholog); positive regulation of double-strand break repair (ortholog); ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 3 (ortholog); Body Weight (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 49171948 49189550 - 22301074;30032202 116908889 MODEL JAAIVD010000002;XM_032912335 XP_032768226 telomerase Cajal body protein 1 protein-coding 626108900 Aspn asporin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN bone mineralization (ortholog); negative regulation of tooth mineralization (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH ankylosing spondylitis (ortholog); degenerative disc disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell projection (ortholog); extracellular matrix (ortholog) 14 68536797 68552643 + 22301074;30032202 116915222 MODEL JAAIVD010000009;XM_032919611 XP_032775502 protein-coding 626108911 LOC116904537 phosphatidylethanolamine-binding protein 2 6 14124502 14125790 + 30032202 116904537 MODEL JAAIVD010000024;XM_032907331 XP_032763222 protein-coding 626108916 LOC116900641 uncharacterized LOC116900641 5 111078694 111080908 + 116900641 MODEL JAAIVD010000023;XR_004387942 ncrna 626108921 LOC116889421 U6 spliceosomal RNA X 81214868 81214974 - 116889421 MODEL JAAIVD010000014;XR_004386386 snrna 626108924 Snrpe small nuclear ribonucleoprotein polypeptide E ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); hepatocellular carcinoma (ortholog); hypogonadism (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) 10 2088719 2094858 + 22301074;30032202 116911404 MODEL JAAIVD010000005;XM_032915365 XP_032771256 small nuclear ribonucleoprotein E protein-coding 626108933 Nck1 NCK adaptor protein 1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); eukaryotic initiation factor eIF2 binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN actin filament organization (ortholog); antiviral innate immune response (ortholog); cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); nephrotic syndrome (ortholog); proteinuria (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 91795481 91854741 - 30032202 116907214 MODEL JAAIVD010000027;XM_032910180;XM_032910181 XP_032766071;XP_032766072 cytoplasmic protein NCK1 protein-coding 626108944 Tfpi tissue factor pathway inhibitor INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to steroid hormone stimulus (ortholog); PARTICIPATES IN coagulation cascade pathway; syndecan signaling pathway; ASSOCIATED WITH Airway Obstruction (ortholog); atrial fibrillation (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); extracellular space (ortholog) 5 61841747 61891430 - 22301074;30032202 116901579 MODEL JAAIVD010000023;XM_032903577;XM_032903578;XM_032903579;XM_032903580;XM_032903581;XM_032903583 XP_032759468;XP_032759469;XP_032759470;XP_032759471;XP_032759472;XP_032759474 protein-coding 626108974 Lama3 laminin subunit alpha 3 INVOLVED IN cell-cell adhesion (ortholog); endodermal cell differentiation (ortholog); hemidesmosome assembly (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH chronic ulcer of skin (ortholog); genetic disease (ortholog); interstitial lung disease 2 (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); endoplasmic reticulum (ortholog) 15 31106773 31335392 - 22301074;30032202 116884493 MODEL JAAIVD010000010;XM_032885613;XM_032885614 XP_032741504;XP_032741505 laminin subunit alpha-3 protein-coding 626109056 Qpct glutaminyl-peptide cyclotransferase ENCODES a protein that exhibits glutaminyl-peptide cyclotransferase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); melanoma (ortholog) 7 14141662 14173835 - 22301074;30032202 116905892 MODEL JAAIVD010000026;XM_032908880 XP_032764771 protein-coding 626109067 LOC116908988 NACHT, LRR and PYD domains-containing protein 1a-like 9 50686458 50691967 - 22301074;30032202 116908988 MODEL JAAIVD010000002;XM_032912458 XP_032768349 protein-coding 626109076 Rnf24 ring finger protein 24 FOUND IN Golgi apparatus (ortholog) 5 111031039 111077093 - 22301074;30032202 116901992 MODEL JAAIVD010000023;XM_032904247;XM_032904249;XM_032904250 XP_032760138;XP_032760140;XP_032760141 protein-coding 626109092 LOC116905260 uncharacterized LOC116905260 7 98200337 98206960 + 116905260 MODEL JAAIVD010000026;XR_004388506 ncrna 626109096 Selenbp1 selenium binding protein 1 ENCODES a protein that exhibits methanethiol oxidase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Colorectal Neoplasms (ortholog); FOUND IN fibrillar center (ortholog); nucleolus (ortholog) 3 62308846 62319589 - 22301074;30032202 116896578 MODEL JAAIVD010000012;XM_032897798 XP_032753689 methanethiol oxidase protein-coding 626109112 LOC116900939 heterogeneous nuclear ribonucleoprotein H-like 5 86678051 86678762 - 116900939 MODEL JAAIVD010000023 pseudo 626109113 Dlgap2 DLG associated protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 13 68968053 69104528 - 22301074;30032202 116914580 MODEL JAAIVD010000008;XM_032918939 XP_032774830 disks large-associated protein 2 protein-coding 626109129 LOC116884079 small nucleolar RNA SNORA17 14 14905435 14905566 + 116884079 MODEL JAAIVD010000009;XR_004385824 snorna 626109132 LOC116909710 uncharacterized LOC116909710 9 63819876 63821909 + 116909710 MODEL JAAIVD010000002;XR_004389090;XR_004389091 ncrna 626109139 LOC116912526 ribosome biogenesis protein NSA2 homolog 11 75199124 75199913 - 116912526 MODEL JAAIVD010000006 pseudo 626109140 LOC116906934 olfactory receptor 145-like 8 32342583 32343512 + 22301074;30032202 116906934 MODEL JAAIVD010000027;XM_032909859 XP_032765750 protein-coding 626109143 Cdh7 cadherin 7 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 10 88204987 88299464 - 22301074;30032202 116911039 MODEL JAAIVD010000005;XM_032914785;XM_032914786 XP_032770676;XP_032770677 cadherin-7 protein-coding 626109157 LOC116900297 olfactory receptor 1086 5 63699584 63700537 - 22301074;30032202 116900297 MODEL JAAIVD010000023;XM_032902052 XP_032757943 protein-coding 626109161 LOC116883488 uncharacterized LOC116883488 14 74458449 74464318 - 116883488 MODEL JAAIVD010000009;XR_004385764 ncrna 626109168 LOC116913898 uncharacterized LOC116913898 12 23445307 23507313 - 116913898 MODEL JAAIVD010000007 pseudo 626109169 Prdm14 PR/SET domain 14 ENCODES a protein that exhibits chromatin DNA binding (ortholog); histone methyltransferase binding (ortholog); methyltransferase regulator activity (ortholog); INVOLVED IN cell fate specification (ortholog); cell morphogenesis (ortholog); embryo implantation (ortholog); PARTICIPATES IN DNA modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lung non-small cell carcinoma (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 147762841 147772982 - 22301074;30032202 116889741 MODEL JAAIVD010000025;XM_032890613 XP_032746504 PR domain zinc finger protein 14 protein-coding 626109178 LOC116892744 zinc finger protein 54-like 2 180706591 180733615 - 30032202 116892744 MODEL JAAIVD010000001;XM_032894616 XP_032750507 protein-coding 626109186 LOC116899258 collagen alpha-1(XIX) chain 4 101613971 101695272 - 116899258 MODEL JAAIVD010000003;XM_032900875 XP_032756766 protein-coding 626109225 Cfap126 cilia and flagella associated protein 126 INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); FOUND IN apical plasma membrane (ortholog); axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog) 10 50272695 50288197 + 30032202 116911456 MODEL JAAIVD010000005;XM_032915426;XM_032915427 XP_032771317;XP_032771318 protein Flattop protein-coding 626109238 LOC116896082 adhesion G-protein coupled receptor V1-like 3 214878075 214911207 + 22301074;30032202 116896082 MODEL JAAIVD010000012;XM_032897059 XP_032752950 protein-coding 626109258 St18 ST18 C2H2C-type zinc finger transcription factor ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN interleukin-1-mediated signaling pathway (ortholog); interleukin-6-mediated signaling pathway (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN nucleus (ortholog); protein-DNA complex (ortholog) 1 141889376 142001705 + 22301074;30032202 116903782 MODEL JAAIVD010000025;XM_032906474 XP_032762365 suppression of tumorigenicity 18 protein protein-coding 626109284 Psmc6 proteasome 26S subunit, ATPase 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of inclusion body assembly (ortholog); FOUND IN cytosolic proteasome complex (ortholog); inclusion body (ortholog); nucleus (ortholog) 12 77687856 77708972 - 22301074;30032202 116913425 MODEL JAAIVD010000007;XM_032917609;XM_032917610 XP_032773500;XP_032773501 26S proteasome regulatory subunit 10B protein-coding 626109307 Cpne9 copine family member 9 INVOLVED IN positive regulation of dendrite extension (ortholog) 6 33229090 33252342 - 30032202 116903423 MODEL JAAIVD010000024;XM_032905953;XM_032905955;XM_032905956 XP_032761844;XP_032761846;XP_032761847 copine-9 protein-coding 626109338 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41348542 41348613 - 116884244 MODEL JAAIVD010000009 trna 626109339 Dcaf5 DDB1 and CUL4 associated factor 5 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 7 94421004 94510247 - 22301074;30032202 116905213 MODEL JAAIVD010000026;XM_032908028;XM_032908029;XM_032908030 XP_032763919;XP_032763920;XP_032763921 DDB1- and CUL4-associated factor 5 protein-coding 626109359 LOC116897512 small nucleolar RNA SNORA19 3 61106564 61106690 - 116897512 MODEL JAAIVD010000012;XR_004387531 snorna 626109362 LOC116913242 ubiquitin-conjugating enzyme E2 G1-like 12 78046301 78048639 - 30032202 116913242 MODEL JAAIVD010000007;XM_032917405 XP_032773296 protein-coding 626109366 LOC116893083 cingulin-like protein 1 2 51286138 51289708 + 116893083 MODEL JAAIVD010000001 pseudo 626109367 Hspbp1 HSPA (Hsp70) binding protein 1 ENCODES a protein that exhibits molecular sequestering activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); positive regulation of protein ubiquitination (ortholog); FOUND IN extracellular space (ortholog) 2 177236973 177259975 - 116892661 MODEL JAAIVD010000001;XM_032894483;XM_032894484 XP_032750374;XP_032750375 hsp70-binding protein 1 protein-coding 626109383 Ppp1r35 protein phosphatase 1 regulatory subunit 35 INVOLVED IN notochord morphogenesis (ortholog); positive regulation of centriole elongation (ortholog); positive regulation of cilium assembly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog) 16 16243093 16244303 - 30032202 116885435 MODEL JAAIVD010000004;XM_032886719 XP_032742610 protein-coding 626109391 LOC116893541 bcl-2-like protein 13 2 203813345 203814644 - 116893541 MODEL JAAIVD010000001 pseudo 626109392 Fgl1 fibrinogen like 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cholesterol metabolic process (ortholog); hepatocyte proliferation (ortholog); FOUND IN extracellular region (ortholog) 13 46346695 46376882 + 30032202 116914743 MODEL JAAIVD010000008;XM_032919182 XP_032775073 fibrinogen-like protein 1 protein-coding 626109404 Ski SKI proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); bone morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH aortic aneurysm (ortholog); ARTERIAL DISSECTION (ortholog); autism spectrum disorder (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear body (ortholog) 1 5498573 5566961 + 22301074;30032202 116892008 MODEL JAAIVD010000025;XM_032893473;XM_032893481 XP_032749364;XP_032749372 ski oncogene protein-coding 626109416 LOC116903769 mitochondrial import receptor subunit TOM7 homolog 6 86462897 86463064 + 116903769 MODEL JAAIVD010000024 pseudo 626109417 LOC116890961 cytochrome b ascorbate-dependent protein 3 ENCODES a protein that exhibits transmembrane ascorbate ferrireductase activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); FOUND IN late endosome membrane (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 2 10058914 10070858 + 30032202 116890961 MODEL JAAIVD010000001;XM_032891620;XM_032891621;XM_032891622;XR_004386800 XP_032747511;XP_032747512;XP_032747513 protein-coding 626109438 Serpinf2 serpin family F member 2 ENCODES a protein that exhibits endopeptidase inhibitor activity (ortholog); protease binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); collagen fibril organization (ortholog); maintenance of blood vessel diameter homeostasis by renin-angiotensin (ortholog); PARTICIPATES IN fibrinolysis pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); alpha-2-plasmin inhibitor deficiency (ortholog); coronary artery disease (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); fibrinogen complex (ortholog) 9 94142048 94148879 - 22301074;30032202 116910176 MODEL JAAIVD010000002;XM_032914035 XP_032769926 alpha-2-antiplasmin protein-coding 626109450 Mbl2 mannose binding lectin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); D-mannose binding (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); antiviral innate immune response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); PARTICIPATES IN lectin complement pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); allergic bronchopulmonary aspergillosis (ortholog); Alzheimer's disease (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog); serine-type endopeptidase complex (ortholog) 2 30336702 30342648 + 30032202 116893773 MODEL JAAIVD010000001;XM_032895473 XP_032751364 mannose-binding protein C protein-coding 626109460 Fhip1a FHF complex subunit HOOK interacting protein 1A INVOLVED IN protein localization to perinuclear region of cytoplasm (ortholog); ASSOCIATED WITH COVID-19 (ortholog); High Myopia (ortholog) 3 67847305 67928872 + 116896728 MODEL JAAIVD010000012;XM_032898151 XP_032754042 Fam160a1 family with sequence similarity 160 member A1;protein FAM160A1 protein-coding 626109475 Klrg2 killer cell lectin like receptor G2 6 101166594 101176029 + 116902887 MODEL JAAIVD010000024;XM_032905219 XP_032761110 killer cell lectin-like receptor subfamily G member 2 protein-coding 626109484 Lrrc14 leucine rich repeat containing 14 ENCODES a protein that exhibits kinase binding (ortholog); INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog); negative regulation of toll-like receptor signaling pathway (ortholog); FOUND IN cytoplasm (ortholog) 1 249037864 249042229 + 30032202 116913403 MODEL JAAIVD010000025;XM_032917588 XP_032773479 leucine-rich repeat-containing protein 14 protein-coding 626109492 LOC116903197 ferritin light chain 1-like 1 128737953 128738489 - 116903197 MODEL JAAIVD010000025 pseudo 626109493 LOC116913933 microfibrillar-associated protein 1-like 12 37243147 37243734 + 116913933 MODEL JAAIVD010000007 pseudo 626109494 LOC116890424 U7 small nuclear RNA 1 199585851 199585913 + 116890424 MODEL JAAIVD010000025;XR_004386623 snrna 626109497 Comt catechol-O-methyltransferase ENCODES a protein that exhibits catechol O-methyltransferase activity (ortholog); INVOLVED IN artery development (ortholog); behavioral fear response (ortholog); catechol-containing compound metabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH Acute Pain (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN axon (ortholog); cell body (ortholog); cytosol (ortholog) 4 3670275 3675103 - 22301074;30032202 116898671 MODEL JAAIVD010000003;XM_032899920 XP_032755811 catechol O-methyltransferase protein-coding 626109505 Axl AXL receptor tyrosine kinase ENCODES a protein that exhibits myosin heavy chain binding (ortholog); phosphatidylinositol 3-kinase binding (ortholog); phosphatidylserine binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic cell clearance (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN Gas6 - Axl signaling axis; ASSOCIATED WITH amenorrhea (ortholog); Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cell surface (ortholog); extracellular space (ortholog) 2 169008685 169039051 + 22301074;30032202 116892446 MODEL JAAIVD010000001;XM_032894147;XM_032894148 XP_032750038;XP_032750039 tyrosine-protein kinase receptor UFO protein-coding 626109530 LOC116889467 U1 spliceosomal RNA X 64075937 64076098 + 116889467 MODEL JAAIVD010000014;XR_004386419 snrna 626109533 Trmo tRNA methyltransferase O ENCODES a protein that exhibits tRNA (L-threonylcarbamoyladenosine(37)-C2) methyltransferase activity (ortholog); INVOLVED IN tRNA methylation (ortholog) 1 99461476 99470673 - 30032202 116901869 MODEL JAAIVD010000025;XM_032904077;XM_032904085;XM_032904090 XP_032759968;XP_032759976;XP_032759981 tRNA (adenine(37)-N6)-methyltransferase protein-coding 626109547 LOC116894166 chromobox protein homolog 3-like 2 105077399 105077915 + 116894166 MODEL JAAIVD010000001 pseudo 626109548 Fam98b family with sequence similarity 98 member B ENCODES a protein that exhibits identical protein binding (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of gene expression (ortholog); protein methylation (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 95419118 95443042 + 30032202 116901773 MODEL JAAIVD010000023;XM_032903913 XP_032759804 protein FAM98B protein-coding 626109560 Entpd7 ectonucleoside triphosphate diphosphohydrolase 7 ENCODES a protein that exhibits CTPase activity (ortholog); GTPase activity (ortholog); ribonucleoside triphosphate phosphatase activity (ortholog); INVOLVED IN CTP catabolic process (ortholog); GTP metabolic process (ortholog); nucleobase-containing small molecule catabolic process (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog) 2 43211062 43251583 + 30032202 116891196 MODEL JAAIVD010000001;XM_032892020 XP_032747911 protein-coding 626109577 LOC116887872 serine protease inhibitor Kazal-type 11-like X 47456663 47465155 + 116887872 MODEL JAAIVD010000014 pseudo 626109578 Bcat1 branched chain amino acid transaminase 1 ENCODES a protein that exhibits branched-chain-amino-acid transaminase activity (ortholog); identical protein binding (ortholog); L-isoleucine-2-oxoglutarate transaminase activity (ortholog); INVOLVED IN branched-chain amino acid catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Brain Injuries (ortholog); cholestasis (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 6 2759449 2807287 - 22301074;30032202 116903075 MODEL JAAIVD010000024;XM_032905394 XP_032761285 branched-chain-amino-acid aminotransferase, cytosolic protein-coding 626109593 Mpdu1 mannose-P-dolichol utilization defect 1 INVOLVED IN oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation If (ortholog); COVID-19 (ortholog) 9 49268359 49273834 - 30032202 116909697 MODEL JAAIVD010000002;XM_032913362 XP_032769253 mannose-P-dolichol utilization defect 1 protein protein-coding 626109604 LOC116895915 TD and POZ domain-containing protein 2-like 3 120793631 120794753 - 30032202 116895915 MODEL JAAIVD010000012;XM_032896990 XP_032752881 protein-coding 626109608 LOC116894461 uncharacterized LOC116894461 2 165586178 165586680 + 116894461 MODEL JAAIVD010000001;XR_004387026 ncrna 626109612 Pip4k2c phosphatidylinositol-5-phosphate 4-kinase type 2 gamma ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); positive regulation of autophagosome assembly (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 205633708 205648195 - 22301074 116909901 MODEL JAAIVD010000025;XM_032913656 XP_032769547 phosphatidylinositol 5-phosphate 4-kinase type-2 gamma protein-coding 626109625 Inpp5a inositol polyphosphate-5-phosphatase A ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity (ortholog); inositol-1,4,5-trisphosphate 5-phosphatase activity (ortholog); inositol-polyphosphate 5-phosphatase activity (ortholog); INVOLVED IN inositol phosphate metabolic process (ortholog); negative regulation of calcium-mediated signaling (ortholog); negative regulation of phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH Arsenic Poisoning (ortholog); schizophrenia (ortholog); skin disease (ortholog); FOUND IN dendrite (ortholog); membrane (ortholog); plasma membrane (ortholog) 2 62278123 62459351 - 22301074;30032202 116891361 MODEL JAAIVD010000001;XM_032892357 XP_032748248 protein-coding 626109645 Exosc6 exosome component 6 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN DNA deamination (ortholog); isotype switching (ortholog); positive regulation of isotype switching (ortholog); FOUND IN cytosol (ortholog); exosome (RNase complex) (ortholog); nucleolus (ortholog) 17 30750881 30752362 + 30032202 116886111 MODEL JAAIVD010000011;XM_032887443 XP_032743334 exosome complex component MTR3 protein-coding 626109650 Stat4 signal transducer and activator of transcription 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); cytokine-mediated signaling pathway (ortholog); hematopoietic stem cell homeostasis (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); autoimmune hepatitis (ortholog); Behcet's disease (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 123316367 123426390 - 30032202 116898498 MODEL JAAIVD010000003;XM_032899735 XP_032755626 protein-coding 626109677 Pram1 PML-RARA regulated adaptor molecule 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN integrin-mediated signaling pathway (ortholog); regulation of neutrophil degranulation (ortholog); FOUND IN protein-containing complex (ortholog) 1 158759747 158767071 - 22301074;30032202 116908142 MODEL JAAIVD010000025;XM_032911467 XP_032767358 PML-RARA-regulated adapter molecule 1 protein-coding 626109688 LOC116890726 60S ribosomal protein L37-like 2 2133373 2134118 - 116890726 MODEL JAAIVD010000001 pseudo 626109689 Szrd1 SUZ RNA binding domain containing 1 1 17007443 17032278 + 116893419 MODEL JAAIVD010000025;XM_032895200;XM_032895204;XM_032895207;XM_032895214;XR_004386995 XP_032751091;XP_032751095;XP_032751098;XP_032751105 SUZ domain-containing protein 1 protein-coding 626109707 LOC116892747 zinc finger protein 54 2 180809104 180818581 - 30032202 116892747 MODEL JAAIVD010000001;XM_032894625 XP_032750516 protein-coding 626109714 LOC116913098 uncharacterized LOC116913098 12 76184236 76184907 + 116913098 MODEL JAAIVD010000007;XR_004389596 ncrna 626109718 Tspan6 tetraspanin 6 INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog) X 86214690 86221687 - 22301074;30032202 116888863 MODEL JAAIVD010000014;XM_032890126;XM_032890127 XP_032746017;XP_032746018 tetraspanin-6 protein-coding 626109736 LOC116888819 60S ribosomal protein L18-like X 87854353 87854816 + 30032202 116888819 MODEL JAAIVD010000014;XM_032890097 XP_032745988 protein-coding 626109741 LOC116884409 RNA transcription, translation and transport factor protein-like 15 70469111 70513968 + 116884409 MODEL JAAIVD010000010 pseudo 626109742 LOC116900120 olfactory receptor 50-like 5 14211646 14212584 + 22301074;30032202 116900120 MODEL JAAIVD010000023;XM_032901896 XP_032757787 protein-coding 626109745 Faim Fas apoptotic inhibitory molecule INVOLVED IN negative regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of neurogenesis (ortholog) 8 90578997 90591861 - 30032202 116907295 MODEL JAAIVD010000027;XM_032910244 XP_032766135 fas apoptotic inhibitory molecule 1 protein-coding 626109752 Myl9 myosin light chain 9 ENCODES a protein that exhibits myosin heavy chain binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN platelet aggregation (ortholog); stress fiber assembly (ortholog); ASSOCIATED WITH brain edema (ortholog); Experimental Liver Cirrhosis (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN myosin II complex (ortholog); stress fiber (ortholog); Z disc (ortholog) 5 136118109 136124527 + 22301074;30032202 116902209 MODEL JAAIVD010000023;XM_032904605;XM_032904606 XP_032760496;XP_032760497 myosin regulatory light polypeptide 9 protein-coding 626109763 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41355582 41355654 - 116884151 MODEL JAAIVD010000009 trna 626109764 LOC116889259 actin, alpha skeletal muscle-like X 44418372 44418758 - 30032202 116889259 MODEL JAAIVD010000014;XM_032890406 XP_032746297 protein-coding 626109768 Atg101 autophagy related 101 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); negative regulation of cell population proliferation (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); colon cancer (ortholog); hepatocellular carcinoma (ortholog); FOUND IN Atg1/ULK1 kinase complex (ortholog); phagophore assembly site (ortholog) 1 261799183 261805547 - 22301074;30032202 116883770 MODEL JAAIVD010000025;XM_032885017 XP_032740908 autophagy-related protein 101 protein-coding 626109775 LOC116900264 olfactory receptor 1030-like 5 63229256 63230194 + 22301074;30032202 116900264 MODEL JAAIVD010000023;XM_032902016 XP_032757907 protein-coding 626109778 LOC116900123 uncharacterized LOC116900123 1 58047180 58047958 + 116900123 MODEL JAAIVD010000025;XR_004387920 ncrna 626109782 Uvssa UV stimulated scaffold protein A ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); RNA polymerase II complex binding (ortholog); RNA polymerase inhibitor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); response to UV (ortholog); transcription-coupled nucleotide-excision repair (ortholog); ASSOCIATED WITH UV-sensitive syndrome (ortholog); UV-Sensitive Syndrome 3 (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 71434639 71471295 - 30032202 116912572 MODEL JAAIVD010000006;XM_032916687;XM_032916688 XP_032772578;XP_032772579 UV-stimulated scaffold protein A protein-coding 626109802 Pate4 prostate and testis expressed 4 ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); regulation of neurotransmitter receptor activity (ortholog); response to wounding (ortholog); FOUND IN acrosomal vesicle (ortholog); extracellular space (ortholog) 8 31152219 31154388 - 116907095 MODEL JAAIVD010000027;XM_032910063 XP_032765954 prostate and testis expressed protein 4 protein-coding 626109808 Cyfip1 cytoplasmic FMR1 interacting protein 1 ENCODES a protein that exhibits RNA 7-methylguanosine cap binding (ortholog); small GTPase binding (ortholog); translation repressor activity (ortholog); INVOLVED IN axon extension (ortholog); cellular response to insulin stimulus (ortholog); cognition (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rho/Rac/Cdc42 mediated signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN axonal growth cone (ortholog); cell leading edge (ortholog); central region of growth cone (ortholog) 2 143256832 143346790 - 22301074;30032202 116892045 MODEL JAAIVD010000001;XM_032893508;XM_032893509;XM_032893510 XP_032749399;XP_032749400;XP_032749401 cytoplasmic FMR1-interacting protein 1 protein-coding 626109849 Cfap36 cilia and flagella associated protein 36 FOUND IN ciliary base (ortholog); ciliary transition zone (ortholog) 11 96839106 96864580 - 30032202 116912118 MODEL JAAIVD010000006;XM_032916021;XM_032916022 XP_032771912;XP_032771913 cilia- and flagella-associated protein 36 protein-coding 626109864 Zic5 Zic family zinc finger 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN forebrain development (ortholog); neural crest cell differentiation (ortholog); neural tube closure (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); hepatocellular carcinoma (ortholog); neural tube defect (ortholog); FOUND IN nucleus (ortholog) 12 2427314 2433519 + 30032202 116913513 MODEL JAAIVD010000007;XM_032917718 XP_032773609 Zic family member 5;zinc finger protein ZIC 5 protein-coding 626109870 Iqcd IQ motif containing D FOUND IN ciliary basal body (ortholog) 16 33220068 33236964 - 22301074 116885693 MODEL JAAIVD010000004;XM_032886998 XP_032742889 dynein regulatory complex protein 10 protein-coding 626109879 Mroh7 maestro heat like repeat family member 7 1 48080971 48126211 + 30032202 116899372 MODEL JAAIVD010000025;XM_032901088 XP_032756979 maestro heat-like repeat-containing protein family member 7 protein-coding 626109907 Dpys dihydropyrimidinase ENCODES a protein that exhibits amino acid binding (ortholog); dihydropyrimidinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN beta-alanine metabolic process (ortholog); CMP catabolic process (ortholog); dCMP catabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; beta-ureidopropionase deficiency pathway; carnosinemia pathway; ASSOCIATED WITH dihydropyrimidinase deficiency (ortholog); dihydropyrimidine dehydrogenase deficiency (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) 1 213109739 213184517 - 22301074;30032202 116890061 MODEL JAAIVD010000025;XM_032890828 XP_032746719 protein-coding 626109921 Vps51 VPS51 subunit of GARP complex INVOLVED IN autophagy (ortholog); brain morphogenesis (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH pontocerebellar hypoplasia type 13 (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); Golgi apparatus (ortholog) 2 1612161 1623524 + 30032202 116890681 MODEL JAAIVD010000001;XM_032891088 XP_032746979 vacuolar protein sorting-associated protein 51 homolog protein-coding 626109935 LOC116896303 uncharacterized LOC116896303 3 37600948 37613359 + 116896303 MODEL JAAIVD010000012;XR_004387323 ncrna 626109940 St6gal2 ST6 beta-galactoside alpha-2,6-sialyltransferase 2 ENCODES a protein that exhibits beta-galactoside alpha-2,6-sialyltransferase activity (ortholog); sialyltransferase activity (ortholog); INVOLVED IN oligosaccharide metabolic process (ortholog) 4 92690210 92781998 + 22301074 116899234 MODEL JAAIVD010000003;XM_032900831;XM_032900832;XM_032900833;XM_032900834;XM_032900836;XR_004387700 XP_032756722;XP_032756723;XP_032756724;XP_032756725;XP_032756727 beta-galactoside alpha-2,6-sialyltransferase 2 protein-coding 626109964 Wwc3 WWC family member 3 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); signaling adaptor activity (ortholog); INVOLVED IN hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of hippo signaling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) X 27464577 27574385 + 30032202 116887808 MODEL JAAIVD010000014;XM_032889333 XP_032745224 protein WWC3 protein-coding 626109991 Aspg asparaginase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); acyltransferase activity, transferring groups other than amino-acyl groups (ortholog); asparaginase activity (ortholog); INVOLVED IN asparagine metabolic process (ortholog); phospholipid metabolic process (ortholog); ASSOCIATED WITH Anaphylaxis (ortholog); anemia (ortholog); Charcot-Marie-Tooth disease axonal type 2O (ortholog) 7 129709482 129728471 + 22301074;30032202 116905508 MODEL JAAIVD010000026;XM_032908531 XP_032764422 60 kDa lysophospholipase protein-coding 626110010 Naif1 nuclear apoptosis inducing factor 1 INVOLVED IN negative regulation of cell growth (ortholog); regulation of mitochondrial membrane permeability involved in apoptotic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 3181315 3186026 - 30032202 116901145 MODEL JAAIVD010000023;XM_032902753 XP_032758644 nuclear apoptosis-inducing factor 1 protein-coding 626110016 LOC116891793 tripartite motif-containing protein 30A-like 2 101390805 101408191 + 22301074 116891793 MODEL JAAIVD010000001;XM_032893145;XM_032893146 XP_032749036;XP_032749037 protein-coding 626110031 LOC116898131 serine protease 40-like 4 110778597 110787411 - 22301074 116898131 MODEL JAAIVD010000003;XM_032899506 XP_032755397 protein-coding 626110040 LOC116888814 nuclear RNA export factor 2-like X 87941722 87957262 - 22301074;30032202 116888814 MODEL JAAIVD010000014;XM_032890093 XP_032745984 protein-coding 626110066 LOC116886340 oogenesin-3-like 1 14657963 14692230 - 22301074;30032202 116886340 MODEL JAAIVD010000025;XM_032887795;XM_032887802 XP_032743686;XP_032743693 protein-coding 626110075 LOC116910480 serine/threonine-protein kinase 17B-like 9 39724131 39725218 - 116910480 MODEL JAAIVD010000002 pseudo 626110076 Stx1a syntaxin 1A ENCODES a protein that exhibits ATP-dependent protein binding (ortholog); calcium channel inhibitor activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); hormone secretion (ortholog); insulin secretion (ortholog); PARTICIPATES IN insulin secretion pathway; ASSOCIATED WITH autistic disorder (ortholog); Creutzfeldt-Jakob disease (ortholog); disease of mental health (ortholog); FOUND IN acrosomal vesicle (ortholog); actomyosin (ortholog); axon (ortholog) 16 18989630 19017862 - 22301074;30032202 116885524 MODEL JAAIVD010000004;XM_032886821 XP_032742712 syntaxin-1A protein-coding 626110090 LOC116883562 histone H2A type 1-B 14 42592503 42593064 - 22301074;30032202 116883562 MODEL JAAIVD010000009;XM_032884743 XP_032740634 protein-coding 626110095 Spry3 sprouty RTK signaling antagonist 3 INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); negative regulation of neuron projection arborization (ortholog); ASSOCIATED WITH Ependymomas (ortholog) 16 15222986 15223968 + 22301074;30032202 116885884 MODEL JAAIVD010000004;XM_032887204 XP_032743095 protein sprouty homolog 3 protein-coding 626110099 Rd3l RD3 like 7 129576870 129578154 - 116905507 MODEL JAAIVD010000026;XM_032908530 XP_032764421 protein RD3-like;retinal degeneration 3 like protein-coding 626110105 Tjp1 tight junction protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); connexin binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actomyosin structure organization (ortholog); adherens junction maintenance (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); bile duct cancer (ortholog); brain disease (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 2 134928827 135162015 + 22301074;30032202 116892003 MODEL JAAIVD010000001;XM_032893462;XM_032893463 XP_032749353;XP_032749354 tight junction protein ZO-1 protein-coding 626110140 Foxn2 forkhead box N2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog) 7 4404204 4448257 - 22301074;30032202 116905739 MODEL JAAIVD010000026;XM_032908704;XM_032908705;XM_032908706 XP_032764595;XP_032764596;XP_032764597 forkhead box protein N2 protein-coding 626110156 LOC116893412 zinc finger protein 431-like 2 173823160 173837380 + 116893412 MODEL JAAIVD010000001 pseudo 626110157 Ank2 ankyrin 2 ENCODES a protein that exhibits ATPase binding (ortholog); channel activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); atrial cardiac muscle cell to AV node cell communication (ortholog); atrial septum development (ortholog); ASSOCIATED WITH ankyrin-B-related cardiac arrhythmia (ortholog); arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); FOUND IN A band (ortholog); basolateral plasma membrane (ortholog); costamere (ortholog) 3 31846968 32432241 + 22301074;30032202 116896278 MODEL JAAIVD010000012;XM_032897358 XP_032753249 ankyrin-2 protein-coding 626110210 Prkx protein kinase cAMP-dependent X-linked catalytic subunit ENCODES a protein that exhibits cAMP-dependent protein kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell adhesion (ortholog); cell-substrate adhesion (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 37575676 37596704 - 22301074 116889103 MODEL JAAIVD010000014;XM_032890271 XP_032746162 cAMP-dependent protein kinase catalytic subunit PRKX;protein kinase X-linked protein-coding 626110219 B4galt7 beta-1,4-galactosyltransferase 7 ENCODES a protein that exhibits beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); galactosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); negative regulation of fibroblast proliferation (ortholog); protein N-linked glycosylation (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); Ehlers-Danlos syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 14 73919033 73927609 + 22301074;30032202 116883701 MODEL JAAIVD010000009;XM_032884914 XP_032740805 protein-coding 626110229 Kcns2 potassium voltage-gated channel modifier subfamily S member 2 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog); voltage-gated potassium channel complex (ortholog) 1 208484011 208489732 + 22301074;30032202 116910496 MODEL JAAIVD010000025;XM_032914391 XP_032770282 potassium voltage-gated channel subfamily S member 2 protein-coding 626110235 Insm1 INSM transcriptional repressor 1 ENCODES a protein that exhibits chromatin DNA binding (ortholog); cyclin binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN adrenal chromaffin cell differentiation (ortholog); endocrine pancreas development (ortholog); endocrine system development (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN nucleus (ortholog); transcription repressor complex (ortholog) 5 125845298 125848343 + 30032202 116902062 MODEL JAAIVD010000023;XM_032904351 XP_032760242 insulinoma-associated protein 1 protein-coding 626110240 Rnpep arginyl aminopeptidase ENCODES a protein that exhibits aminopeptidase activity (ortholog); cobalt ion binding (ortholog); copper ion binding (ortholog); INVOLVED IN negative regulation of blood pressure (ortholog); protein processing (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN angiotensin IV signaling pathway; renin-angiotensin cascade pathway; ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hypertension (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular region (ortholog); extracellular space (ortholog) 10 430470 449309 + 22301074;30032202 116911187 MODEL JAAIVD010000005;XM_032915055 XP_032770946 aminopeptidase B protein-coding 626110255 Tomm70 translocase of outer mitochondrial membrane 70 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to virus (ortholog); PARTICIPATES IN alpha-helical insertion pathway of mitochondrial protein import; beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; ASSOCIATED WITH Cardiomegaly (ortholog); congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 4 41232594 41265459 + 22301074 116898907 MODEL JAAIVD010000003;XM_032900314 XP_032756205 mitochondrial import receptor subunit TOM70 protein-coding 626110271 LOC116891145 cytochrome P450 2C7-like 2 39204011 39209095 + 22301074;30032202 116891145 MODEL JAAIVD010000001;XM_032891894 XP_032747785 protein-coding 626110278 LOC116911763 uncharacterized LOC116911763 10 16015126 16271262 - 116911763 MODEL JAAIVD010000005;XR_004389338;XR_004389339 ncrna 626110288 CXHXorf58 chromosome X CXorf58 homolog X 52289797 52295580 - 116887901 MODEL JAAIVD010000014;XM_032889376 XP_032745267 putative uncharacterized protein CXorf58 homolog protein-coding 626110294 LOC116912053 uridine 5'-monophosphate synthase-like 11 91551564 91613955 + 116912053 MODEL JAAIVD010000006 pseudo 626110295 LOC116908220 40S ribosomal protein S6-like 8 75096336 75099244 - 116908220 MODEL JAAIVD010000027 pseudo 626110296 Dnaaf6 dynein axonemal assembly factor 6 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 36 (ortholog); FOUND IN cytoplasm (ortholog); trans-Golgi network (ortholog) X 91940097 91992093 - 30032202 116888643 MODEL JAAIVD010000014;XM_032889934 XP_032745825 protein PIH1D3 protein-coding 626110308 Aoah acyloxyacyl hydrolase ENCODES a protein that exhibits acyloxyacyl hydrolase activity (ortholog); calcium ion binding (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); lipopolysaccharide catabolic process (ortholog); lipopolysaccharide metabolic process (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 14 38709004 38931355 - 30032202 116883634 MODEL JAAIVD010000009;XM_032884823;XM_032884824 XP_032740714;XP_032740715 protein-coding 626110335 Fsip1 fibrous sheath interacting protein 1 INVOLVED IN acrosome assembly (ortholog); axoneme assembly (ortholog); cilium assembly (ortholog); FOUND IN acrosomal vesicle (ortholog); nucleus (ortholog); sperm head (ortholog) 5 96349532 96405859 - 116901775 MODEL JAAIVD010000023;XM_032903915 XP_032759806 fibrous sheath-interacting protein 1 protein-coding 626110351 LOC116892426 transmembrane protein 258-like 2 168433842 168434148 - 116892426 MODEL JAAIVD010000001 pseudo 626110352 Wipi2 WD repeat domain, phosphoinositide interacting 2 ENCODES a protein that exhibits phosphatidylinositol-3,5-bisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagosome maturation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH SHORT STATURE AND VARIABLE SKELETAL ANOMALIES (ortholog); FOUND IN autophagosome (ortholog); cytosol (ortholog); membrane (ortholog) 16 10476269 10508928 - 22301074;30032202 116885376 MODEL JAAIVD010000004;XM_032886650 XP_032742541 WD repeat domain phosphoinositide-interacting protein 2 protein-coding 626110368 LOC116887465 uncharacterized LOC116887465 18 8937915 8941139 + 116887465 MODEL JAAIVD010000013;XR_004386219 ncrna 626110373 Ube2d2 ubiquitin conjugating enzyme E2 D2 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); protein K48-linked ubiquitination (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN ubiquitin/proteasome degradation pathway; ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN protein-containing complex (ortholog) 15 8569791 8607417 - 30032202 116884310 MODEL JAAIVD010000010;XM_032885419 XP_032741310 ubiquitin-conjugating enzyme E2 D2 protein-coding 626110384 LOC116885340 putative fidgetin-like protein 2 16 3282194 3283959 + 116885340 MODEL JAAIVD010000004 pseudo 626110385 LOC116892246 zinc finger protein 709-like 2 160172647 160188100 - 22301074 116892246 MODEL JAAIVD010000001;XM_032893815 XP_032749706 protein-coding 626110393 Kif2a kinesin family member 2A ENCODES a protein that exhibits microtubule binding (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); dendritic transport (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); complex cortical dysplasia with other brain malformations 3 (ortholog); genetic disease (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) 3 190584616 190650030 + 22301074;30032202 116897212 MODEL JAAIVD010000012;XM_032898922;XM_032898923;XM_032898924;XM_032898925;XM_032898926 XP_032754813;XP_032754814;XP_032754815;XP_032754816;XP_032754817 kinesin-like protein KIF2A protein-coding 626110431 LOC116894063 olfactory receptor 51T1 2 102863606 102864637 + 22301074 116894063 MODEL JAAIVD010000001;XM_032895786 XP_032751677 protein-coding 626110435 C2H11orf42 chromosome 2 C11orf42 homolog FOUND IN sperm flagellum (ortholog) 2 104210664 104213834 + 116891814 MODEL JAAIVD010000001;XM_032893171 XP_032749062 uncharacterized protein C11orf42 homolog protein-coding 626110440 LOC116895947 25-hydroxycholesterol 7-alpha-hydroxylase INVOLVED IN B cell chemotaxis (ortholog); bile acid biosynthetic process (ortholog); circadian rhythm (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cholestasis (ortholog); congenital bile acid synthesis defect (ortholog) 3 135891008 135999449 + 22301074;30032202 116895947 MODEL JAAIVD010000012;XM_032897007 XP_032752898 protein-coding 626110449 Clip2 CAP-Gly domain containing linker protein 2 ENCODES a protein that exhibits microtubule binding (ortholog); microtubule plus-end binding (ortholog); ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN cytoplasmic microtubule (ortholog); dendritic microtubule (ortholog); lamellar body (ortholog) 16 19505297 19567675 + 30032202 116885157 MODEL JAAIVD010000004;XM_032886362 XP_032742253 CAP-Gly domain-containing linker protein 2 protein-coding 626110470 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 41244327 41244399 - 116886803 MODEL JAAIVD010000011 trna 626110471 Gnpda2 glucosamine-6-phosphate deaminase 2 ENCODES a protein that exhibits glucosamine-6-phosphate deaminase activity (ortholog); INVOLVED IN UDP-N-acetylglucosamine biosynthetic process (ortholog); ASSOCIATED WITH Body Weight (ortholog); obesity (ortholog) 11 26606286 26624176 - 22301074;30032202 116912306 MODEL JAAIVD010000006;XM_032916319;XM_032916320 XP_032772210;XP_032772211 glucosamine-6-phosphate isomerase 2 protein-coding 626110484 Slc13a3 solute carrier family 13 member 3 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); citrate transmembrane transporter activity (ortholog); dicarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); citrate transport (ortholog); dicarboxylic acid transport (ortholog); ASSOCIATED WITH Acute Reversible Leukoencephalopathy with Increased Urinary Alpha-ketoglutarate (ortholog); prostate cancer (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); plasma membrane (ortholog) 5 152492149 152553784 + 22301074;30032202 116902333 MODEL JAAIVD010000023;XM_032904807 XP_032760698 protein-coding 626110501 Stard10 StAR related lipid transfer domain containing 10 INVOLVED IN bile acid secretion (ortholog); positive regulation of peroxisome proliferator activated receptor signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); intercellular canaliculus (ortholog); membrane (ortholog) 2 99630215 99653739 + 22301074 116891758 MODEL JAAIVD010000001;XM_032893079;XM_032893080 XP_032748970;XP_032748971 START domain-containing protein 10 protein-coding 626110515 Dennd6b DENN domain containing 6B ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog) 1 258488520 258499804 - 30032202 116915012 MODEL JAAIVD010000025;XM_032919422;XR_004389789 XP_032775313 protein DENND6B protein-coding 626110543 Nefh neurofilament heavy chain ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN axon development (ortholog); axon regeneration (ortholog); cellular response to estradiol stimulus (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); Anti-N-Methyl-D-Aspartate Receptor Encephalitis (ortholog); FOUND IN apical dendrite (ortholog); axon (ortholog); basal proximal dendrite (ortholog) 11 73913368 73923737 - 30032202 116912193 MODEL JAAIVD010000006;XM_032916127 XP_032772018 neurofilament heavy polypeptide protein-coding 626110552 Nek2 NIMA related kinase 2 ENCODES a protein that exhibits protein kinase activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blastocyst development (ortholog); centrosome separation (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); fundus dystrophy (ortholog); hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 10 69916520 69929742 + 22301074 116911463 MODEL JAAIVD010000005;XM_032915438 XP_032771329 serine/threonine-protein kinase Nek2 protein-coding 626110564 LOC116887870 Kruppel-like factor 18 1 62946193 62947785 + 30032202 116887870 MODEL JAAIVD010000025;XM_032889363 XP_032745254 protein-coding 626110567 LOC116888186 ubiquitin-conjugating enzyme E2 C-like 1 228940620 228941093 + 116888186 MODEL JAAIVD010000025 pseudo 626110568 LOC116888916 adenylate kinase isoenzyme 6-like X 51610930 51613024 - 30032202 116888916 MODEL JAAIVD010000014;XM_032890166 XP_032746057 protein-coding 626110572 LOC116904426 thymidine kinase, cytosolic-like 6 113354889 113365680 - 116904426 MODEL JAAIVD010000024 pseudo 626110573 LOC116889648 translation initiation factor IF-2-like 22301074;30032202 116889648 MODEL JAAIVD010000041;XM_032890553 XP_032746444 protein-coding 626110574 Map9 microtubule associated protein 9 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN mitotic spindle assembly (ortholog); regulation of mitotic centrosome separation (ortholog); regulation of mitotic cytokinesis (ortholog); FOUND IN aster (ortholog); astral microtubule (ortholog); axon (ortholog) 3 71170749 71201295 - 30032202 116896749 MODEL JAAIVD010000012;XM_032898192 XP_032754083 microtubule-associated protein 9 protein-coding 626110592 Pnpla2 patatin like domain 2, triacylglycerol lipase ENCODES a protein that exhibits acylglycerol O-acyltransferase activity (ortholog); diolein transacylation activity (ortholog); mono-olein transacylation activity (ortholog); INVOLVED IN diacylglycerol biosynthetic process (ortholog); intracellular triglyceride homeostasis (ortholog); lipid catabolic process (ortholog); ASSOCIATED WITH Chanarin-Dorfman syndrome (ortholog); congestive heart failure (ortholog); endomyocardial fibrosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 2 8027496 8032573 - 22301074;30032202 116890863 MODEL JAAIVD010000001;XM_032891430 XP_032747321 patatin like phospholipase domain containing 2;patatin-like phospholipase domain-containing protein 2 protein-coding 626110605 LOC116901417 40S ribosomal protein S2-like 5 32237371 32238066 - 116901417 MODEL JAAIVD010000023 pseudo 626110606 Spata20 spermatogenesis associated 20 ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); FOUND IN mitochondrion (ortholog) 9 51055787 51062501 + 22301074 116909028 MODEL JAAIVD010000002;XM_032912507 XP_032768398 spermatogenesis-associated protein 20 protein-coding 626110625 LOC116896810 histone H3.3A-like 3 89683361 89683770 - 116896810 MODEL JAAIVD010000012 pseudo 626110626 LOC116903730 broad substrate specificity ATP-binding cassette transporter ABCG2 6 83212267 83268498 - 22301074;30032202 116903730 MODEL JAAIVD010000024;XM_032906411;XM_032906412 XP_032762302;XP_032762303 protein-coding 626110652 C1qtnf3 C1q and TNF related 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN fat cell differentiation (ortholog); glucose homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); protein-containing complex (ortholog) 3 169783934 169804989 - 22301074;30032202 116895616 MODEL JAAIVD010000012;XM_032896827;XM_032896828 XP_032752718;XP_032752719 complement C1q tumor necrosis factor-related protein 3 protein-coding 626110664 LOC116897749 olfactory receptor 19 4 1880252 1883694 - 22301074;30032202 116897749 MODEL JAAIVD010000003;XM_032899183 XP_032755074 protein-coding 626110668 Rad51 RAD51 recombinase ENCODES a protein that exhibits ATP binding (ortholog); chromatin binding (ortholog); DNA polymerase binding (ortholog); INVOLVED IN cellular response to alkaloid (ortholog); cellular response to camptothecin (ortholog); cellular response to cisplatin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN chromatin (ortholog); chromosome (ortholog); chromosome, telomeric region (ortholog) 5 97289646 97314419 + 22301074;30032202 116901795 MODEL JAAIVD010000023;XM_032903950 XP_032759841 DNA repair protein RAD51 homolog 1 protein-coding 626110681 LOC116894430 keratin-associated protein 20-2-like 2 158885382 158885573 + 116894430 MODEL JAAIVD010000001;XM_032896135 XP_032752026 protein-coding 626110684 Selenoo selenoprotein O ENCODES a protein that exhibits AMPylase activity (ortholog); INVOLVED IN protein adenylylation (ortholog); FOUND IN chromosome (ortholog); mitochondrion (ortholog) 1 258396790 258407629 + 116914920 MODEL JAAIVD010000025;XM_032919354 XP_032775245 protein adenylyltransferase SelO, mitochondrial protein-coding 626110697 LOC116909529 uncharacterized LOC116909529 9 50153961 50155929 - 116909529 MODEL JAAIVD010000002;XR_004389079 ncrna 626110701 LOC116899376 high mobility group protein B2-like 4 123762807 123763893 + 116899376 MODEL JAAIVD010000003;XR_004387722 pseudo 626110704 Capza1 capping actin protein of muscle Z-line subunit alpha 1 ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cell junction assembly (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN brush border (ortholog); cell-cell junction (ortholog); cortical cytoskeleton (ortholog) 3 53245567 53293360 + 22301074;30032202 116896425 MODEL JAAIVD010000012;XM_032897571 XP_032753462 F-actin-capping protein subunit alpha-1 protein-coding 626110718 Mon1a MON1 vesicular trafficking associated A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); intracellular iron ion homeostasis (ortholog); protein secretion (ortholog); ASSOCIATED WITH congenital diarrhea (ortholog); iron metabolism disease (ortholog); FOUND IN Mon1-Ccz1 complex (ortholog) 8 99230644 99235065 + 22301074;30032202 116907553 MODEL JAAIVD010000027;XM_032910575 XP_032766466 MON1 homolog A, secretory trafficking associated;vacuolar fusion protein MON1 homolog A protein-coding 626110727 Znf296 zinc finger protein 296 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 2 171043063 171046754 - 30032202 116892508 MODEL JAAIVD010000001;XM_032894261 XP_032750152 protein-coding 626110734 LOC116890147 60S ribosomal protein L19-like 1 247869951 247870678 - 116890147 MODEL JAAIVD010000025 pseudo 626110735 Adam23 ADAM metallopeptidase domain 23 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN glutamatergic synapse (ortholog); presynaptic membrane (ortholog) 4 137400873 137546080 + 22301074;30032202 116899446 MODEL JAAIVD010000003;XM_032901217 XP_032757108 disintegrin and metalloproteinase domain-containing protein 23 protein-coding 626110765 LOC116888518 melanoma-associated antigen B4-like X 45271946 45272983 - 30032202 116888518 MODEL JAAIVD010000014;XM_032889817 XP_032745708 protein-coding 626110768 Tor1aip1 torsin 1A interacting protein 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN nuclear membrane organization (ortholog); positive regulation of ATP-dependent activity (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2Y (ortholog); centronuclear myopathy (ortholog); genetic disease (ortholog); FOUND IN nuclear envelope (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 10 35428646 35457858 - 22301074;30032202 116911689 MODEL JAAIVD010000005;XM_032915643;XM_032915645;XM_032915646 XP_032771534;XP_032771536;XP_032771537 torsin-1A-interacting protein 1 protein-coding 626110789 LOC116911891 U6 spliceosomal RNA 10 66863580 66863683 + 116911891 MODEL JAAIVD010000005;XR_004389401 snrna 626110792 Drgx dorsal root ganglia homeobox ENCODES a protein that exhibits DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); axonogenesis (ortholog); detection of chemical stimulus (ortholog) 13 8314643 8344280 + 22301074;30032202 116914642 MODEL JAAIVD010000008;XM_032919036 XP_032774927 dorsal root ganglia homeobox protein protein-coding 626110803 LOC116886789 U6 spliceosomal RNA 17 36383889 36383989 + 116886789 MODEL JAAIVD010000011 pseudo 626110804 Usp47 ubiquitin specific peptidase 47 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); WD40-repeat domain binding (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); monoubiquitinated protein deubiquitination (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); SCF ubiquitin ligase complex (ortholog) 2 89371199 89428415 - 22301074;30032202 116891651 MODEL JAAIVD010000001;XM_032892894;XM_032892896;XM_032892897 XP_032748785;XP_032748787;XP_032748788 ubiquitin carboxyl-terminal hydrolase 47 protein-coding 626110841 LOC116897447 U6 spliceosomal RNA 3 141333343 141333453 + 116897447 MODEL JAAIVD010000012;XR_004387481 snrna 626110844 Spaca9 sperm acrosome associated 9 ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN axoneme assembly (ortholog); flagellated sperm motility (ortholog); ASSOCIATED WITH Ehlers-Danlos syndrome classic type 1 (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal microtubule (ortholog); axonemal microtubule doublet inner sheath (ortholog) 5 7974117 7983819 + 30032202 116901226 MODEL JAAIVD010000023;XM_032902959;XM_032902960;XM_032902961;XM_032902962;XM_032902963 XP_032758850;XP_032758851;XP_032758852;XP_032758853;XP_032758854 sperm acrosome-associated protein 9 protein-coding 626110863 LOC116912743 zinc finger protein 431-like 11 14793935 14810177 + 22301074 116912743 MODEL JAAIVD010000006;XM_032916887 XP_032772778 protein-coding 626110871 LOC116909513 60S ribosomal protein L39-like 9 12141213 12141580 - 22301074;30032202 116909513 MODEL JAAIVD010000002;XM_032913118 XP_032769009 protein-coding 626110876 Tmtc3 transmembrane O-mannosyltransferase targeting cadherins 3 ENCODES a protein that exhibits dolichyl-phosphate-mannose-protein mannosyltransferase activity (ortholog); INVOLVED IN bud outgrowth involved in lung branching (ortholog); cell differentiation (ortholog); lung alveolus development (ortholog); ASSOCIATED WITH genetic disease (ortholog); lissencephaly (ortholog); lissencephaly 8 (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 223222679 223267945 - 22301074;30032202 116911279 MODEL JAAIVD010000025;XM_032915189 XP_032771080 protein O-mannosyl-transferase TMTC3 protein-coding 626110894 LOC116886534 protein transport protein Sec61 subunit gamma-like 17 15171621 15172014 + 116886534 MODEL JAAIVD010000011 pseudo 626110895 LOC116895066 small nucleolar RNA SNORA17 2 11268849 11268975 + 116895066 MODEL JAAIVD010000001;XR_004387240 snorna 626110898 Dhcr7 7-dehydrocholesterol reductase ENCODES a protein that exhibits 7-dehydrocholesterol reductase activity (ortholog); cholesterol-5,6-oxide hydrolase activity (ortholog); oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN blood vessel development (ortholog); cholesterol biosynthetic process (ortholog); cholesterol biosynthetic process via desmosterol (ortholog); PARTICIPATES IN cholesterol biosynthetic pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Animal Disease Models (ortholog); autistic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog) 2 5862552 5879800 - 30032202 116890826 MODEL JAAIVD010000001;XM_032891336;XM_032891337;XM_032891339 XP_032747227;XP_032747228;XP_032747230 protein-coding 626110918 Tmem259 transmembrane protein 259 INVOLVED IN positive regulation of ERAD pathway (ortholog); response to endoplasmic reticulum stress (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 154892715 154899261 + 30032202 116905469 MODEL JAAIVD010000025;XM_032908438 XP_032764329 membralin protein-coding 626110931 Snx16 sorting nexin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endosome to lysosome transport (ortholog); protein targeting to lysosome (ortholog); FOUND IN early endosome (ortholog); endosome membrane (ortholog); late endosome (ortholog) 3 144478891 144498732 - 22301074;30032202 116897038 MODEL JAAIVD010000012;XM_032898659;XM_032898660 XP_032754550;XP_032754551 sorting nexin-16 protein-coding 626110945 Mlip muscular LMNA interacting protein ENCODES a protein that exhibits lamin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle hypertrophy (ortholog); negative regulation of cardiac muscle hypertrophy in response to stress (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 64 (ortholog); genetic disease (ortholog); Myopathy with Myalgia, increased Serum Creatine Kinase, and with or without Episodic Rhabdomyolysis 1 (ortholog); FOUND IN nuclear envelope (ortholog); nuclear lumen (ortholog); nucleus (ortholog) 8 71381022 71580085 - 30032202 116908279 MODEL JAAIVD010000027;XM_032911522;XM_032911523;XM_032911524;XM_032911525;XM_032911526;XM_032911527;XM_032911528;XM_032911529;XM_032911530;XM_032911531;XM_032911532;XM_032911534;XM_032911535;XM_032911536;XM_032911537;XM_032911538;XM_032911539;XM_032911540 XP_032767413;XP_032767414;XP_032767415;XP_032767416;XP_032767417;XP_032767418;XP_032767419;XP_032767420;XP_032767421;XP_032767422;XP_032767423;XP_032767425;XP_032767426;XP_032767427;XP_032767428;XP_032767429;XP_032767430;XP_032767431 muscular LMNA-interacting protein protein-coding 626110985 Col22a1 collagen type XXII alpha 1 chain ASSOCIATED WITH intracranial aneurysm (ortholog); lung small cell carcinoma (ortholog) 1 244625379 244834042 - 116890126 MODEL JAAIVD010000025;XM_032890864 XP_032746755 collagen alpha-1(XXII) chain protein-coding 626111051 LOC116912458 periphilin-1-like 1 171368240 171369079 + 116912458 MODEL JAAIVD010000025 pseudo 626111052 LOC116906320 U6 spliceosomal RNA 7 69310231 69310333 - 116906320 MODEL JAAIVD010000026;XR_004388607 snrna 626111055 Pwwp2b PWWP domain containing 2B ENCODES a protein that exhibits NuRD complex binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of cold-induced thermogenesis (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 2 62580985 62600494 - 30032202 116891363 MODEL JAAIVD010000001;XM_032892359;XM_032892360 XP_032748250;XP_032748251 PWWP domain-containing protein 2B protein-coding 626111067 Spred2 sprouty related EVH1 domain containing 2 ENCODES a protein that exhibits protein kinase binding (ortholog); protein serine/threonine kinase inhibitor activity (ortholog); stem cell factor receptor binding (ortholog); INVOLVED IN negative regulation of epithelial to mesenchymal transition (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of intracellular signal transduction (ortholog); ASSOCIATED WITH achondroplasia (ortholog); Alzheimer's disease (ortholog); Noonan syndrome (ortholog); FOUND IN cytoplasmic vesicle (ortholog); plasma membrane (ortholog) 11 88183040 88289730 + 22301074;30032202 116912099 MODEL JAAIVD010000006;XM_032915993;XM_032915994 XP_032771884;XP_032771885 sprouty-related, EVH1 domain-containing protein 2 protein-coding 626111080 Rfxank regulatory factor X associated ankyrin containing protein ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone deacetylase binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH genetic disease (ortholog); MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); intercellular bridge (ortholog) 13 12399698 12405709 - 22301074;30032202 116914442 MODEL JAAIVD010000008;XM_032918742 XP_032774633 DNA-binding protein RFXANK protein-coding 626111092 LOC116887600 alpha/beta hydrolase domain-containing protein 17C-like 18 9346676 9354569 - 116887600 MODEL JAAIVD010000013 pseudo 626111093 LOC116900826 dnaJ homolog subfamily C member 8-like 5 45889407 45890165 + 116900826 MODEL JAAIVD010000023 pseudo 626111094 Hoxd8 homeobox D8 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 5 52047014 52049285 + 22301074;30032202 116901533 MODEL JAAIVD010000023;XM_032903513 XP_032759404 homeobox protein Hox-D8 protein-coding 626111100 LOC116893001 retinoic acid early-inducible protein 1-gamma-like 2 222113466 222125900 - 116893001 MODEL JAAIVD010000001 pseudo 626111101 LOC116911024 E3 ubiquitin-protein ligase CCNB1IP1-like 10 33608480 33609206 - 116911024 MODEL JAAIVD010000005 pseudo 626111102 LOC116899472 carbamoyl-phosphate synthase [ammonia], mitochondrial-like 4 141208622 141230223 + 22301074;30032202 116899472 MODEL JAAIVD010000003;XM_032901294 XP_032757185 protein-coding 626111116 LOC116897206 uncharacterized LOC116897206 3 188449369 188452759 + 116897206 MODEL JAAIVD010000012;XR_004387402 ncrna 626111121 Tmc7 transmembrane channel like 7 ENCODES a protein that exhibits ion channel inhibitor activity (ortholog); INVOLVED IN sensory perception of mechanical stimulus (ortholog) 2 83070614 83121320 + 30032202 116891609 MODEL JAAIVD010000001;XM_032892809 XP_032748700 transmembrane channel-like protein 7 protein-coding 626111141 Paf1 PAF1 component of Paf1/RNA polymerase II complex ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; FOUND IN Cdc73/Paf1 complex (ortholog); cytoplasm (ortholog); fibrillar center (ortholog) 2 167598047 167603672 - 22301074;30032202 116892392 MODEL JAAIVD010000001;XM_032894064 XP_032749955 PAF1 homolog, Paf1/RNA polymerase II complex component;RNA polymerase II-associated factor 1 homolog protein-coding 626111159 LOC116884853 interferon-inducible GTPase 1-like 15 71501959 71520361 - 22301074;30032202 116884853 MODEL JAAIVD010000010;XM_032886096 XP_032741987 protein-coding 626111165 Lypd1 LY6/PLAUR domain containing 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral fear response (ortholog); negative regulation of protein localization to plasma membrane (ortholog); FOUND IN membrane (ortholog) 10 9750998 9769650 - 30032202 116911129 MODEL JAAIVD010000005;XM_032914977;XM_032914978 XP_032770868;XP_032770869 ly6/PLAUR domain-containing protein 1 protein-coding 626111178 Slc39a1 solute carrier family 39 member 1 ENCODES a protein that exhibits signaling receptor binding (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN embryonic cranial skeleton morphogenesis (ortholog); in utero embryonic development (ortholog); limb development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); respiratory allergy (ortholog); FOUND IN plasma membrane (ortholog) 3 63387601 63393285 - 30032202 116896615 MODEL JAAIVD010000012;XM_032897874;XM_032897875 XP_032753765;XP_032753766 zinc transporter ZIP1 protein-coding 626111190 LOC116906382 small nucleolar RNA SNORD113/SNORD114 family 7 127219606 127219677 + 116906382 MODEL JAAIVD010000026;XR_004388652 snorna 626111193 LOC116909069 uncharacterized LOC116909069 9 88483489 88499237 - 116909069 MODEL JAAIVD010000002;XR_004389047;XR_004389048 ncrna 626111202 LOC116889531 small nucleolar RNA SNORA40 X 101303840 101303965 - 116889531 MODEL JAAIVD010000014;XR_004386467 snorna 626111205 LOC116915198 small nucleolar RNA SNORA48 13 30122213 30122356 - 116915198 MODEL JAAIVD010000008;XR_004389852 snorna 626111208 LOC116897811 L-lactate dehydrogenase A chain-like 4 7649644 7650633 + 116897811 MODEL JAAIVD010000003 pseudo 626111209 Msmp microseminoprotein, prostate associated ENCODES a protein that exhibits CCR2 chemokine receptor binding (ortholog); INVOLVED IN lymphocyte chemotaxis (ortholog); monocyte chemotaxis (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 1 2913065 2914127 + 116891011 MODEL JAAIVD010000025;XM_032891694 XP_032747585 prostate-associated microseminoprotein protein-coding 626111215 L3mbtl2 L3MBTL histone methyl-lysine binding protein 2 ENCODES a protein that exhibits histone binding (ortholog); histone H4K20me1 reader activity (ortholog); histone H4K20me2 reader activity (ortholog); INVOLVED IN chromatin organization (ortholog); ectoderm development (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH medulloblastoma (ortholog); FOUND IN nucleus (ortholog) 1 251412917 251434125 + 22301074 116914028 MODEL JAAIVD010000025;XM_032918297;XM_032918305 XP_032774188;XP_032774196 lethal(3)malignant brain tumor-like protein 2 protein-coding 626111239 Cemip2 cell migration inducing hyaluronidase 2 ENCODES a protein that exhibits calcium ion binding (ortholog); hyalurononglucosaminidase activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); ASSOCIATED WITH Chronic Hepatitis B (ortholog); Experimental Liver Cirrhosis (ortholog); Hypertelorism (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); plasma membrane (ortholog) 2 21877614 21961210 + 116891033 MODEL JAAIVD010000001;XM_032891715 XP_032747606 cell surface hyaluronidase protein-coding 626111267 LOC116888841 heterogeneous nuclear ribonucleoprotein A1-like X 89763032 89763979 - 116888841 MODEL JAAIVD010000014 pseudo 626111268 Trnav-aac transfer RNA valine (anticodon AAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31456805 31456877 + 116910792 MODEL JAAIVD010000002 trna 626111269 Dlx4 distal-less homeobox 4 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); orofacial cleft 15 (ortholog); FOUND IN nucleoplasm (ortholog) 9 59238837 59243722 + 22301074;30032202 116910599 MODEL JAAIVD010000002;XM_032914527 XP_032770418 homeobox protein DLX-4 protein-coding 626111276 LOC116912050 40S ribosomal protein S2-like 11 88029730 88031509 + 116912050 MODEL JAAIVD010000006 pseudo 626111277 Krt19 keratin 19 ENCODES a protein that exhibits protein-containing complex binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cell differentiation involved in embryonic placenta development (ortholog); Notch signaling pathway (ortholog); response to estrogen (ortholog); ASSOCIATED WITH asthma (ortholog); autoimmune disease (ortholog); cholangitis (ortholog); FOUND IN apicolateral plasma membrane (ortholog); cell periphery (ortholog); costamere (ortholog) 9 54889286 54893862 - 22301074;30032202 116909657 MODEL JAAIVD010000002;XM_032913310 XP_032769201 keratin, type I cytoskeletal 19 protein-coding 626111287 Fli1 Fli-1 proto-oncogene, ETS transcription factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); blood circulation (ortholog); megakaryocyte development (ortholog); ASSOCIATED WITH Ewing sarcoma (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 8 28116938 28235663 - 22301074;30032202 116907714 MODEL JAAIVD010000027;XM_032910840;XM_032910841 XP_032766731;XP_032766732 Friend leukemia integration 1 transcription factor protein-coding 626111303 Ventx VENT homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); histone acetyltransferase binding (ortholog); histone acetyltransferase regulator activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN nucleus (ortholog) 2 61816352 61818628 + 22301074;30032202 116893866 MODEL JAAIVD010000001;XM_032895585;XM_032895586 XP_032751476;XP_032751477 homeobox protein VENTX protein-coding 626111312 LOC116901598 40S ribosomal protein S2-like 5 64965340 64966030 + 116901598 MODEL JAAIVD010000023 pseudo 626111313 Abtb1 ankyrin repeat and BTB domain containing 1 FOUND IN cytosol (ortholog); nucleolus (ortholog); plasma membrane (ortholog) 6 57491034 57497311 + 22301074;30032202 116903520 MODEL JAAIVD010000024;XM_032906127;XM_032906128 XP_032762018;XP_032762019 ankyrin repeat and BTB/POZ domain-containing protein 1 protein-coding 626111332 Ttbk1 tau tubulin kinase 1 ENCODES a protein that exhibits protein serine kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN learning or memory (ortholog); negative regulation of gene expression (ortholog); positive regulation of astrocyte activation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Childhood Schizophrenia (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); microtubule associated complex (ortholog); neuronal cell body (ortholog) 4 83373364 83415673 + 22301074;30032202 116899109 MODEL JAAIVD010000003;XM_032900626 XP_032756517 tau-tubulin kinase 1 protein-coding 626111351 LOC116884448 uncharacterized LOC116884448 15 9721831 9723516 + 116884448 MODEL JAAIVD010000010;XR_004385871 ncrna 626111355 Kcnj16 potassium inwardly rectifying channel subfamily J member 16 ENCODES a protein that exhibits inward rectifier potassium channel activity (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); potassium ion transport (ortholog); regulation of pH (ortholog); ASSOCIATED WITH Brugada syndrome 1 (ortholog); hypokalemia (ortholog); Hypokalemic Tubulopathy and Deafness (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 9 78273721 78303474 - 22301074;30032202;7874445 116910046 MODEL JAAIVD010000002;X83581;XM_032913836 CAA58564;XP_032769727 inward rectifier potassium channel 16;inward rectifier potassuim channel 9 protein-coding 626111361 LOC116883275 contactin-associated protein-like 3 14 74717892 74882630 + 116883275 MODEL JAAIVD010000009;XM_032884263 XP_032740154 protein-coding 626111389 Phf6 PHD finger protein 6 ENCODES a protein that exhibits enzyme binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Borjeson-Forssman-Lehmann syndrome (ortholog); colorectal carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 116304226 116342692 - 30032202 116888348 MODEL JAAIVD010000014;XM_032889617 XP_032745508 protein-coding 626111403 Rhov ras homolog family member V 5 97448760 97450805 - 22301074;30032202 116901805 MODEL JAAIVD010000023;XM_032903964 XP_032759855 rho-related GTP-binding protein RhoV protein-coding 626111410 Nlrp10 NLR family pyrin domain containing 10 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); GTPase activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); defense response to fungus (ortholog); positive regulation of defense response to bacterium (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 2 92552015 92559519 + 30032202 116893944 MODEL JAAIVD010000001;XM_032895661 XP_032751552 NACHT, LRR and PYD domains-containing protein 10 protein-coding 626111417 LOC116900270 olfactory receptor 5M3 5 63315840 63316772 + 22301074;30032202 116900270 MODEL JAAIVD010000023;XM_032902022 XP_032757913 protein-coding 626111420 LOC116889921 ribosome biogenesis regulatory protein homolog 1 160706326 160707408 + 116889921 MODEL JAAIVD010000025 pseudo 626111421 Scimp SLP adaptor and CSK interacting membrane protein ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN cellular response to molecule of fungal origin (ortholog); positive regulation of cytokine production involved in immune response (ortholog); positive regulation of dendritic cell cytokine production (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN filopodium (ortholog); immunological synapse (ortholog); leading edge membrane (ortholog) 9 50407395 50416173 - 22301074;30032202 116910401 MODEL JAAIVD010000002;XM_032914241 XP_032770132 SLP adapter and CSK-interacting membrane protein protein-coding 626111429 LOC116906427 small nucleolar RNA SNORA18 7 73142981 73143109 - 116906427 MODEL JAAIVD010000026;XR_004388688 snorna 626111432 Fam25a family with sequence similarity 25 member A 13 10122418 10126181 - 116914981 MODEL JAAIVD010000008;XM_032919384 XP_032775275 protein FAM25A protein-coding 626111439 Rreb1 ras responsive element binding protein 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of brown fat cell differentiation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); microcephaly (ortholog); RASopathy (ortholog); FOUND IN fibrillar center (ortholog); nuclear speck (ortholog) 14 56867439 56991639 + 30032202 116883295 MODEL JAAIVD010000009;XM_032884305 XP_032740196 ras-responsive element-binding protein 1 protein-coding 626111456 LOC116887508 olfactory receptor 12D2-like 18 10235775 10236701 - 22301074 116887508 MODEL JAAIVD010000013;XM_032889134 XP_032745025 protein-coding 626111459 LOC116888480 transforming protein RhoA-like X 12151920 12152892 - 116888480 MODEL JAAIVD010000014;XR_004386316 pseudo 626111462 LOC116900684 cystatin-S-like 5 128732840 128737524 - 22301074;30032202 116900684 MODEL JAAIVD010000023;XM_032902387 XP_032758278 protein-coding 626111467 Clasrp CLK4 associating serine/arginine rich protein FOUND IN nucleoplasm (ortholog) 2 171018380 171042663 + 116892501 MODEL JAAIVD010000001;XM_032894249;XM_032894250;XR_004386955 XP_032750140;XP_032750141 CLK4-associating serine/arginine rich protein protein-coding 626111496 LOC116911875 U6 spliceosomal RNA 10 83195906 83196012 - 116911875 MODEL JAAIVD010000005;XR_004389389 snrna 626111499 LOC116896087 uncharacterized LOC116896087 3 216726166 216731299 + 22301074 116896087 MODEL JAAIVD010000012;XM_032897065 XP_032752956 uncharacterized protein LOC116896087 protein-coding 626111502 Lrp10 LDL receptor related protein 10 ENCODES a protein that exhibits low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN inner ear development (ortholog); lipid metabolic process (ortholog); lipid transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Macrocephaly (ortholog); FOUND IN membrane (ortholog) 12 70529116 70535276 - 22301074;30032202 116913535 MODEL JAAIVD010000007;XM_032917733 XP_032773624 low-density lipoprotein receptor-related protein 10 protein-coding 626111513 LOC116893938 proteasome maturation protein-like 2 88028082 88029031 + 116893938 MODEL JAAIVD010000001 pseudo 626111514 Pcsk7 proprotein convertase subtilisin/kexin type 7 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN protein processing (ortholog); ASSOCIATED WITH corpus callosum lipoma (ortholog); hereditary breast ovarian cancer syndrome (ortholog); intellectual disability (ortholog); FOUND IN Golgi membrane (ortholog) 8 40427198 40450178 + 22301074;30032202 116906701 MODEL JAAIVD010000027;XM_032909499 XP_032765390 protein-coding 626111535 Tektl1 tektin like 1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); sperm flagellum (ortholog) 10 87676568 87677314 + 116910967 MODEL JAAIVD010000005;XM_032914688 XP_032770579 Ccdc105 coiled-coil domain containing 105;coiled-coil domain-containing protein 105 protein-coding 626111539 Glg1 golgi glycoprotein 1 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of protein processing (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); FOUND IN extracellular matrix (ortholog); Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) 17 30849568 30955679 - 22301074;30032202 116886502 MODEL JAAIVD010000011;XM_032888008 XP_032743899 Golgi apparatus protein 1 protein-coding 626111569 LOC116898395 nucleophosmin-like 4 78919595 78920207 + 116898395 MODEL JAAIVD010000003 pseudo 626111570 LOC116893206 lysosomal Pro-X carboxypeptidase-like 2 108130980 108254358 - 116893206 MODEL JAAIVD010000001 pseudo 626111571 Ggnbp2 gametogenetin binding protein 2 INVOLVED IN cell differentiation (ortholog); labyrinthine layer blood vessel development (ortholog); labyrinthine layer development (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 85832468 85864195 + 30032202 116909189 MODEL JAAIVD010000002;XM_032912680;XM_032912681;XM_032912682;XM_032912683;XM_032912684;XM_032912685;XM_032912686 XP_032768571;XP_032768572;XP_032768573;XP_032768574;XP_032768575;XP_032768576;XP_032768577 gametogenetin-binding protein 2 protein-coding 626111603 LOC116912497 cytokine receptor-like factor 2 11 18719689 18724330 + 30032202 116912497 MODEL JAAIVD010000006;XM_032916581 XP_032772472 protein-coding 626111615 LOC116895610 uncharacterized LOC116895610 3 168989036 169005647 + 116895610 MODEL JAAIVD010000012;XR_004387294 ncrna 626111620 LOC116915178 U6 spliceosomal RNA 13 60751960 60752068 - 116915178 MODEL JAAIVD010000008;XR_004389837 snrna 626111623 Rps4x ribosomal protein S4 X-linked ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of cell population proliferation (ortholog); positive regulation of translation (ortholog); response to ethanol (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) X 59980045 59984495 - 22301074;30032202 116888515 MODEL JAAIVD010000014;X14210;XM_032889815 CAA32427;XP_032745706 40S ribosomal protein S4, X isoform protein-coding 626111634 LOC116902063 60S ribosomal protein L18-like 5 125936867 125937428 + 116902063 MODEL JAAIVD010000023 pseudo 626111635 Slc6a5 solute carrier family 6 member 5 ENCODES a protein that exhibits glycine transmembrane transporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN glycine import across plasma membrane (ortholog); glycine transport (ortholog); neurotransmitter reuptake (ortholog); ASSOCIATED WITH Apnea (ortholog); brain disease (ortholog); Cryopyrin-Associated Periodic Syndromes (ortholog); FOUND IN dense core granule (ortholog); endosome (ortholog); glycinergic synapse (ortholog) 2 149876878 149921857 - 22301074;30032202 116893297 MODEL JAAIVD010000001;XM_032895127 XP_032751018 sodium- and chloride-dependent glycine transporter 2 protein-coding 626111654 LOC116905468 uncharacterized LOC116905468 7 127302877 127306324 + 116905468 MODEL JAAIVD010000026;XR_004388540 ncrna 626111659 Trhde thyrotropin releasing hormone degrading enzyme ASSOCIATED WITH long QT syndrome (ortholog) 1 192523290 192927101 - 22301074;30032202 116908997 MODEL JAAIVD010000025;X80535;XM_032912469 CAA56675;XP_032768360 thyrotropin-releasing hormone-degrading ectoenzyme protein-coding 626111682 LOC116910892 DNA-directed RNA polymerases I and III subunit RPAC2-like 10 42177538 42177922 - 116910892 MODEL JAAIVD010000005 pseudo 626111683 LOC116889155 protein BEX1 X 88214581 88216108 - 30032202 116889155 MODEL JAAIVD010000014;XM_032890321 XP_032746212 protein-coding 626111690 Hmg20b high mobility group 20B INVOLVED IN negative regulation of protein sumoylation (ortholog); positive regulation of neuron differentiation (ortholog); skeletal muscle cell differentiation (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 1 153543161 153547429 + 30032202 116904372 MODEL JAAIVD010000025;XM_032907249 XP_032763140 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related protein-coding 626111703 LOC116898298 60S ribosomal protein L28-like 4 182244228 182244643 + 116898298 MODEL JAAIVD010000003 pseudo 626111704 Mrm2 mitochondrial rRNA methyltransferase 2 ENCODES a protein that exhibits rRNA (uridine-2'-O-)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial large ribosomal subunit assembly (ortholog); rRNA processing (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; ASSOCIATED WITH mitochondrial DNA depletion syndrome 17 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 16 12863660 12867664 + 22301074;30032202 116885878 MODEL JAAIVD010000004;XM_032887202 XP_032743093 rRNA methyltransferase 2, mitochondrial protein-coding 626111710 LOC116913141 protein kish-A-like 12 41109127 41109332 + 116913141 MODEL JAAIVD010000007 pseudo 626111711 LOC116901947 C-1-tetrahydrofolate synthase, cytoplasmic-like 5 107735594 107738719 + 22301074;30032202 116901947 MODEL JAAIVD010000023;XM_032904179 XP_032760070 protein-coding 626111716 LOC116896110 choline-phosphate cytidylyltransferase A-like 3 919694 920730 - 116896110 MODEL JAAIVD010000012 pseudo 626111717 LOC116897327 THO complex subunit 7 homolog 3 213561844 213562580 - 22301074;30032202 116897327 MODEL JAAIVD010000012;XM_032899081 XP_032754972 protein-coding 626111722 Faap20 FA core complex associated protein 20 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); ubiquitin-modified protein reader activity (ortholog); INVOLVED IN DNA damage response (ortholog); interstrand cross-link repair (ortholog); translesion synthesis (ortholog); FOUND IN cell junction (ortholog); chromatin (ortholog); chromosome (ortholog) 1 5464817 5474859 - 22301074;30032202 116891990 MODEL JAAIVD010000025;XM_032893445;XM_032893452;XM_032893461 XP_032749336;XP_032749343;XP_032749352 Fanconi anemia core complex-associated protein 20 protein-coding 626111738 Trmt1 tRNA methyltransferase 1 ENCODES a protein that exhibits tRNA (guanine(26)-N2)-dimethyltransferase activity (ortholog); INVOLVED IN tRNA N2-guanine methylation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 68 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 17 15593362 15605879 - 22301074;30032202 116886301 MODEL JAAIVD010000011;XM_032887742 XP_032743633 tRNA (guanine(26)-N(2))-dimethyltransferase protein-coding 626111760 LOC116906094 short-chain dehydrogenase/reductase family 16C member 6-like 7 72617826 72635529 + 30032202 116906094 MODEL JAAIVD010000026;XM_032909108 XP_032764999 protein-coding 626111768 Fbxo46 F-box protein 46 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN SCF-dependent proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) 2 171484741 171500807 - 22301074 116892549 MODEL JAAIVD010000001;XM_032894319;XM_032894321 XP_032750210;XP_032750212 F-box only protein 46 protein-coding 626111780 Tmprss9 transmembrane serine protease 9 ENCODES a protein that exhibits serine-type peptidase activity (ortholog); INVOLVED IN plasminogen activation (ortholog); proteolysis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Developmental Disabilities (ortholog) 1 153984824 154005995 - 22301074 116906508 MODEL JAAIVD010000025;XM_032909249 XP_032765140 transmembrane protease serine 9 protein-coding 626111801 LOC116897451 U6 spliceosomal RNA 3 73557555 73557660 - 116897451 MODEL JAAIVD010000012;XR_004387484 snrna 626111804 LOC116898698 hsc70-interacting protein-like 1 99350562 99351661 - 116898698 MODEL JAAIVD010000025 pseudo 626111805 LOC116899948 U2 spliceosomal RNA 4 20433745 20433931 + 116899948 MODEL JAAIVD010000003;XR_004387906 snrna 626111808 LOC116886607 mediator of RNA polymerase II transcription subunit 29-like 17 12920030 12920649 - 116886607 MODEL JAAIVD010000011 pseudo 626111809 Lrrfip2 LRR binding FLII interacting protein 2 ENCODES a protein that exhibits LRR domain binding (ortholog); INVOLVED IN MyD88-dependent toll-like receptor 4 signaling pathway (ortholog); MyD88-independent toll-like receptor signaling pathway (ortholog); positive regulation of tumor necrosis factor production (ortholog) 8 101686923 101791468 + 22301074;30032202 116907700 MODEL JAAIVD010000027;XM_032910812;XM_032910813;XM_032910814;XM_032910815;XM_032910817;XM_032910818;XM_032910819;XM_032910820;XM_032910821;XM_032910822;XM_032910823 XP_032766703;XP_032766704;XP_032766705;XP_032766706;XP_032766708;XP_032766709;XP_032766710;XP_032766711;XP_032766712;XP_032766713;XP_032766714 leucine-rich repeat flightless-interacting protein 2 protein-coding 626111857 Fam118b family with sequence similarity 118 member B ENCODES a protein that exhibits identical protein binding (ortholog) 8 30769584 30819239 - 116907787 MODEL JAAIVD010000027;XM_032910931 XP_032766822 protein FAM118B protein-coding 626111869 LOC116894303 protein SET-like 2 141235627 141236730 + 116894303 MODEL JAAIVD010000001 pseudo 626111870 LOC116898780 uncharacterized LOC116898780 4 17478971 17485538 - 116898780 MODEL JAAIVD010000003;XR_004387663 ncrna 626111874 Hspd1 heat shock protein family D (Hsp60) member 1 ENCODES a protein that exhibits apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); cysteine-type endopeptidase activator activity (ortholog); INVOLVED IN adhesion of symbiont to host (ortholog); apoptotic mitochondrial changes (ortholog); B cell activation (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Alzheimer's disease (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); coated vesicle (ortholog) 4 129530141 129540679 - 22301074;30032202 116899390 MODEL JAAIVD010000003;XM_032901112;XM_032901113 XP_032757003;XP_032757004 60 kDa heat shock protein, mitochondrial protein-coding 626111893 LOC116884141 small nucleolar RNA SNORA68 14 17056848 17056976 - 116884141 MODEL JAAIVD010000009;XR_004385859 snorna 626111896 LOC116888246 polycomb group RING finger protein 6-like X 63548954 63550078 - 30032202 116888246 MODEL JAAIVD010000014;XM_032889532 XP_032745423 protein-coding 626111901 LOC116908409 mitochondrial import inner membrane translocase subunit Tim8 B-like 1 174540540 174540773 + 116908409 MODEL JAAIVD010000025;XM_032911619 XP_032767510 protein-coding 626111904 Tgm1 transglutaminase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); Chloracne (ortholog); FOUND IN adherens junction (ortholog); membrane (ortholog) 12 69296218 69309517 + 22301074;30032202 116913561 MODEL JAAIVD010000007;XM_032917772 XP_032773663 protein-glutamine gamma-glutamyltransferase K protein-coding 626111922 LOC116893438 glyceraldehyde-3-phosphate dehydrogenase-like 2 176152755 176153729 + 116893438 MODEL JAAIVD010000001 pseudo 626111923 Ybey ybeY metalloendoribonuclease ENCODES a protein that exhibits RNA endonuclease activity (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 8 106665014 106671283 + 22301074 116907857 MODEL JAAIVD010000027;XM_032911046 XP_032766937 endoribonuclease YbeY protein-coding 626111931 U2af1l4 U2 small nuclear RNA auxiliary factor 1 like 4 2 165445083 165447160 - 22301074;30032202 116892310 MODEL JAAIVD010000001;XM_032893930;XM_032893931 XP_032749821;XP_032749822 splicing factor U2AF 26 kDa subunit protein-coding 626111947 Tex2 testis expressed 2 ASSOCIATED WITH COVID-19 (ortholog) 9 72515963 72620558 + 22301074;30032202 116908568 MODEL JAAIVD010000002;XM_032911772;XM_032911773 XP_032767663;XP_032767664 testis-expressed protein 2 protein-coding 626111965 Crh corticotropin releasing hormone ENCODES a protein that exhibits corticotropin-releasing hormone receptor 1 binding (ortholog); corticotropin-releasing hormone receptor 2 binding (ortholog); INVOLVED IN adrenal gland development (ortholog); associative learning (ortholog); cellular response to cocaine (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); Alcohol-Related Disorders (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog); neuronal dense core vesicle lumen (ortholog) 3 134362647 134364784 + 22301074;30032202 116895568 MODEL JAAIVD010000012;XM_032896802 XP_032752693 corticoliberin protein-coding 626111971 LOC116886776 U2 spliceosomal RNA 17 8497665 8497804 + 116886776 MODEL JAAIVD010000011 pseudo 626111972 LOC116884380 ral guanine nucleotide dissociation stimulator-like 15 52275049 52275730 - 116884380 MODEL JAAIVD010000010 pseudo 626111973 Pepd peptidase D ENCODES a protein that exhibits peptidase activity (ortholog); proline dipeptidase activity (ortholog); INVOLVED IN CARD8 inflammasome complex assembly (ortholog); negative regulation of programmed cell death (ortholog); proteolysis (ortholog); ASSOCIATED WITH chronic ulcer of skin (ortholog); disease by infectious agent (ortholog); genetic disease (ortholog) 2 163643880 163776867 - 22301074 116892276 MODEL JAAIVD010000001;XM_032893865 XP_032749756 xaa-Pro dipeptidase protein-coding 626111992 LOC116885093 ruvB-like 2 1 213316106 213316695 - 116885093 MODEL JAAIVD010000025 pseudo 626111993 Atp11a ATPase phospholipid transporting 11A ENCODES a protein that exhibits phosphatidylethanolamine flippase activity (ortholog); phosphatidylserine flippase activity (ortholog); INVOLVED IN in utero embryonic development (ortholog); positive regulation of myotube differentiation (ortholog); regulation of membrane lipid distribution (ortholog); ASSOCIATED WITH Autosomal Dominant Auditory Neuropathy 2 (ortholog); autosomal dominant nonsyndromic deafness 33 (ortholog); autosomal dominant nonsyndromic deafness 84 (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); phospholipid-translocating ATPase complex (ortholog) 13 70822141 70935636 - 22301074;30032202 116915037 MODEL JAAIVD010000008;XM_032919443 XP_032775334 probable phospholipid-transporting ATPase IH protein-coding 626112027 Fbxo39 F-box protein 39 9 43202166 43206578 - 22301074 116909556 MODEL JAAIVD010000002;XM_032913175 XP_032769066 F-box only protein 39 protein-coding 626112035 Tedc2 tubulin epsilon and delta complex 2 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centriole (ortholog); cilium (ortholog) 9 1511364 1516211 - 116910065 MODEL JAAIVD010000002;XM_032913877 XP_032769768 tubulin epsilon and delta complex protein 2 protein-coding 626112049 LOC116911862 U2 spliceosomal RNA 10 5744203 5744364 + 116911862 MODEL JAAIVD010000005 pseudo 626112050 LOC116898517 barrier-to-autointegration factor-like 4 133838190 133838489 - 22301074 116898517 MODEL JAAIVD010000003;XM_032899743 XP_032755634 protein-coding 626112053 Sp9 Sp9 transcription factor ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic limb morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); generalized epilepsy (ortholog); intellectual disability (ortholog) 5 50620385 50624224 + 30032202 116901517 MODEL JAAIVD010000023;XM_032903492 XP_032759383 transcription factor Sp9 protein-coding 626112059 LOC116890457 small nucleolar RNA SNORD59 1 155565381 155565455 + 116890457 MODEL JAAIVD010000025;XR_004386649 snorna 626112062 Map4k3 mitogen-activated protein kinase kinase kinase kinase 3 ENCODES a protein that exhibits ATP binding (ortholog); protein serine/threonine kinase activity (ortholog); SH3 domain binding (ortholog); INVOLVED IN intracellular signal transduction (ortholog); protein phosphorylation (ortholog); response to tumor necrosis factor (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Ependymomas (ortholog); Temporomandibular Joint Disorders (ortholog) 7 12337138 12506265 + 22301074;30032202 116905846 MODEL JAAIVD010000026;XM_032908817 XP_032764708 protein-coding 626112100 LOC116897766 importin subunit alpha-1-like 4 769958 771618 - 116897766 MODEL JAAIVD010000003 pseudo 626112101 Trnat-cgu transfer RNA threonine (anticodon CGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41510277 41510350 + 116884203 MODEL JAAIVD010000009 trna 626112102 Frmd5 FERM domain containing 5 ENCODES a protein that exhibits integrin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN negative regulation of cell motility (ortholog); positive regulation of cell adhesion (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); neurodevelopmental disorder with eye movement abnormalities and ataxia (ortholog); FOUND IN adherens junction (ortholog) 5 99672693 99933097 - 22301074 116901873 MODEL JAAIVD010000023;XM_032904078;XM_032904079;XM_032904080 XP_032759969;XP_032759970;XP_032759971 FERM domain-containing protein 5 protein-coding 626112131 LOC116910233 uncharacterized LOC116910233 9 43304476 43307309 + 116910233 MODEL JAAIVD010000002;XM_032914124 XP_032770015 uncharacterized protein LOC116910233 protein-coding 626112137 Uprt uracil phosphoribosyltransferase homolog INVOLVED IN female pregnancy (ortholog); lactation (ortholog); response to insulin (ortholog); ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); FOUND IN nucleoplasm (ortholog) X 67064623 67090552 + 116888695 MODEL JAAIVD010000014;XM_032889985 XP_032745876 protein-coding 626112149 LOC116883401 40S ribosomal protein S8-like 14 2861076 2861744 + 116883401 MODEL JAAIVD010000009;XR_004385759 pseudo 626112152 LOC116900503 olfactory receptor 8K3-like 5 72341610 72342551 + 22301074;30032202 116900503 MODEL JAAIVD010000023;XM_032902238 XP_032758129 protein-coding 626112155 LOC116894203 olfactory receptor 493 2 106349020 106349976 - 22301074;30032202 116894203 MODEL JAAIVD010000001;XM_032895916 XP_032751807 protein-coding 626112158 Gramd1b GRAM domain containing 1B ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 8 34894568 34996338 - 30032202 116907085 MODEL JAAIVD010000027;XM_032910041;XM_032910042;XM_032910043;XM_032910044;XM_032910046;XM_032910047;XM_032910048;XM_032910049 XP_032765932;XP_032765933;XP_032765934;XP_032765935;XP_032765937;XP_032765938;XP_032765939;XP_032765940 protein Aster-B protein-coding 626112199 Fah fumarylacetoacetate hydrolase ENCODES a protein that exhibits fumarylacetoacetase activity (ortholog); INVOLVED IN L-arginine catabolic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH beta-mannosidosis (ortholog); COVID-19 (ortholog); genetic disease (ortholog) 2 115766092 115788580 + 22301074;30032202 116891875 MODEL JAAIVD010000001;XM_032893280 XP_032749171 fumarylacetoacetase protein-coding 626112217 Abcc3 ATP binding cassette subfamily C member 3 ENCODES a protein that exhibits ABC-type bile acid transporter activity (ortholog); ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type xenobiotic transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); canalicular bile acid transport (ortholog); leukotriene transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; etoposide pharmacodynamics pathway; etoposide pharmacokinetics pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); bilirubin metabolic disorder (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); ciliary basal body (ortholog) 9 51148823 51193924 + 22301074;30032202 116909627 MODEL JAAIVD010000002;XM_032913268 XP_032769159 canalicular multispecific organic anion transporter 2 protein-coding 626112252 Dok4 docking protein 4 INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); nervous system development (ortholog); positive regulation of MAPK cascade (ortholog) 17 1740261 1747322 - 30032202 116886142 MODEL JAAIVD010000011;XM_032887494;XM_032887495 XP_032743385;XP_032743386 protein-coding 626112268 Pcdh20 protocadherin 20 12 36282508 36288910 + 22301074 116913654 MODEL JAAIVD010000007;XM_032917925 XP_032773816 protocadherin-20 protein-coding 626112274 Brs3 bombesin receptor subtype 3 ASSOCIATED WITH Hyperphagia (ortholog); hypertension (ortholog); obesity (ortholog); FOUND IN neuronal cell body (ortholog) X 117462722 117466890 + 22301074 116888833 MODEL JAAIVD010000014;XM_032890107 XP_032745998 bombesin receptor subtype-3 protein-coding 626112279 Tmx2 thioredoxin related transmembrane protein 2 ENCODES a protein that exhibits disulfide oxidoreductase activity (ortholog); identical protein binding (ortholog); INVOLVED IN brain development (ortholog); ASSOCIATED WITH Neurodevelopmental Disorder with Microcephaly, Cortical Malformations, and Spasticity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondria-associated endoplasmic reticulum membrane contact site (ortholog); mitochondrion (ortholog) 5 62052724 62060389 - 30032202 116901583 MODEL JAAIVD010000023;XM_032903597;XM_032903598 XP_032759488;XP_032759489 thioredoxin-related transmembrane protein 2 protein-coding 626112294 LOC116893592 ATP synthase F(0) complex subunit C1, mitochondrial-like 2 915803 916337 - 22301074;30032202 116893592 MODEL JAAIVD010000001;XM_032895290 XP_032751181 protein-coding 626112299 LOC116914065 60S ribosomal protein L21-like 12 69099970 69100443 - 22301074;30032202 116914065 MODEL JAAIVD010000007;XM_032918368 XP_032774259 protein-coding 626112302 LOC116895436 UDP-N-acetylglucosamine transferase subunit ALG13 homolog 3 67709891 67710378 + 116895436 MODEL JAAIVD010000012 pseudo 626112303 KEG97_t09 tRNA-Asn MT 5076 5147 - 64988242 trna 626112304 LOC116909561 uncharacterized LOC116909561 9 60561383 60562249 + 116909561 MODEL JAAIVD010000002;XR_004389081 ncrna 626112308 Ndufaf2 NADH:ubiquinone oxidoreductase complex assembly factor 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN cilium assembly (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); Metabolic Brain Diseases, Inborn (ortholog); FOUND IN mitochondrion (ortholog) 3 190143124 190253032 - 22301074 116897210 MODEL JAAIVD010000012;XM_032898919 XP_032754810 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 protein-coding 626112316 Gli1 GLI family zinc finger 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cerebellar cortex morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epidermal cell differentiation (ortholog); PARTICIPATES IN altered Hedgehog signaling pathway; Hedgehog signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Bardet-Biedl syndrome (ortholog); Choroidal Neovascularization (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 1 205765173 205777571 - 30032202;33012205 116910020 MODEL JAAIVD010000025;XM_032913806;XM_032913812 XP_032769697;XP_032769703 zinc finger protein GLI1 protein-coding 626112336 Tmed9 transmembrane p24 trafficking protein 9 ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN COPI coating of Golgi vesicle (ortholog); early endosome to Golgi transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); Golgi apparatus (ortholog) 14 73912260 73916526 + 30032202 116883681 MODEL JAAIVD010000009;XM_032884892 XP_032740783 transmembrane emp24 domain-containing protein 9 protein-coding 626112345 Ndufs2 NADH:ubiquinone oxidoreductase core subunit S2 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); oxygen sensor activity (ortholog); INVOLVED IN cellular response to oxygen levels (ortholog); gliogenesis (ortholog); mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH cardiomyopathy (ortholog); Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 10 50399049 50410453 - 22301074;30032202 116911017 MODEL JAAIVD010000005;XM_032914749 XP_032770640 NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial protein-coding 626112362 LOC116895542 TD and POZ domain-containing protein 5-like 3 120990729 120992219 + 30032202 116895542 MODEL JAAIVD010000012;XM_032896785 XP_032752676 protein-coding 626112367 LOC116894090 olfactory receptor 52E2-like 2 103267241 103268177 - 116894090 MODEL JAAIVD010000001 pseudo 626112368 Opa1 OPA1 mitochondrial dynamin like GTPase ENCODES a protein that exhibits cardiolipin binding (ortholog); GTPase activity (ortholog); GTPase-dependent fusogenic activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to glucose stimulus (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN mitochondria fusion pathway; ASSOCIATED WITH 3-methylglutaconic aciduria type 3 (ortholog); Acute Lung Injury (ortholog); Alzheimer's disease (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); mitochondrial crista (ortholog) 4 14478312 14556210 + 22301074;30032202 116898742 MODEL JAAIVD010000003;XM_032900055;XM_032900056;XM_032900057;XM_032900058 XP_032755946;XP_032755947;XP_032755948;XP_032755949 dynamin-like 120 kDa protein, mitochondrial protein-coding 626112406 LOC116899989 spermidine synthase-like 5 258721 259880 - 116899989 MODEL JAAIVD010000023 pseudo 626112407 Mif4gd MIF4G domain containing ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cap-dependent translational initiation (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); histone mRNA stem-loop binding complex (ortholog) 9 68488863 68492950 + 22301074;30032202 116910595 MODEL JAAIVD010000002;XM_032914519 XP_032770410 MIF4G domain-containing protein protein-coding 626112416 Enpp7 ectonucleotide pyrophosphatase/phosphodiesterase 7 ENCODES a protein that exhibits phosphoric diester hydrolase activity (ortholog); sphingomyelin phosphodiesterase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN fatty acid homeostasis (ortholog); lipid digestion (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi apparatus (ortholog); microvillus (ortholog); plasma membrane (ortholog) 9 65044314 65048592 - 116910532 MODEL JAAIVD010000002;XM_032914436 XP_032770327 ectonucleotide pyrophosphatase/phosphodiesterase family member 7 protein-coding 626112424 Cbll1 Cbl proto-oncogene like 1 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cell-cell adhesion (ortholog); mRNA processing (ortholog); negative regulation of cell adhesion (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 7 44859660 44873924 - 30032202 116904952 MODEL JAAIVD010000026;XM_032907603;XM_032907604;XM_032907605;XM_032907607;XM_032907608 XP_032763494;XP_032763495;XP_032763496;XP_032763498;XP_032763499 E3 ubiquitin-protein ligase Hakai protein-coding 626112444 LOC116885445 influenza virus NS1A-binding protein homolog 16 2694041 2695720 + 116885445 MODEL JAAIVD010000004 pseudo 626112445 LOC116900516 40S ribosomal protein S10-like 5 81356396 81356916 - 30032202 116900516 MODEL JAAIVD010000023;XM_032902246;XM_032902247 XP_032758137;XP_032758138 protein-coding 626112451 LOC116894256 60S ribosomal protein L36-like 2 115395267 115395602 - 116894256 MODEL JAAIVD010000001 pseudo 626112452 LOC116885872 olfactory receptor 10AC1-like 16 9998117 10001972 + 22301074 116885872 MODEL JAAIVD010000004;XM_032887197 XP_032743088 protein-coding 626112456 Tmem208 transmembrane protein 208 FOUND IN endoplasmic reticulum membrane (ortholog) 17 25052331 25055056 + 30032202 116886376 MODEL JAAIVD010000011;XM_032887843 XP_032743734 protein-coding 626112466 LOC116892997 casein kinase I-like 1 13283972 13285419 + 116892997 MODEL JAAIVD010000025 pseudo 626112467 Spock2 SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 ENCODES a protein that exhibits calcium ion binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); extracellular matrix organization (ortholog); positive regulation of cell-substrate adhesion (ortholog) 18 25920731 25947177 + 22301074 116886919 MODEL JAAIVD010000013;XM_032888398 XP_032744289 testican-2 protein-coding 626112482 LOC116890507 small nucleolar RNA SNORA48 1 219422409 219422540 + 116890507 MODEL JAAIVD010000025 pseudo 626112483 LOC116903649 DNA-directed RNA polymerase II subunit GRINL1A-like 6 158907274 158912045 - 116903649 MODEL JAAIVD010000024 pseudo 626112484 LOC116912234 UDP-glucuronosyltransferase 2B17-like 11 1594803 1610416 + 22301074 116912234 MODEL JAAIVD010000006;XM_032916209 XP_032772100 protein-coding 626112494 LOC116894996 small Cajal body-specific RNA 15 2 118728977 118729103 - 116894996 MODEL JAAIVD010000001;XR_004387186 ncrna 626112497 LOC116908424 small nucleolar RNA SNORA40 8 11107334 11107461 + 116908424 MODEL JAAIVD010000027;XR_004388957 snorna 626112500 Cnih4 cornichon family member 4 ENCODES a protein that exhibits CCR5 chemokine receptor binding (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 10 59509698 59527531 + 30032202 116911231 MODEL JAAIVD010000005;XM_032915131 XP_032771022 cornichon family AMPA receptor auxiliary protein 4;protein cornichon homolog 4 protein-coding 626112509 LOC116900212 uncharacterized LOC116900212 5 52094068 52095466 + 116900212 MODEL JAAIVD010000023;XR_004387925 ncrna 626112513 Syt13 synaptotagmin 13 INVOLVED IN epithelial cell differentiation (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of cell cycle (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); breast cancer (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN plasma membrane (ortholog); transport vesicle (ortholog) 5 67087153 67127912 + 30032202 116901647 MODEL JAAIVD010000023;XM_032903752 XP_032759643 synaptotagmin-13 protein-coding 626112523 Sms spermine synthase ENCODES a protein that exhibits spermine synthase activity (ortholog); INVOLVED IN spermine biosynthetic process (ortholog); spermine metabolic process (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; polyamine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH anxiety disorder (ortholog); Developmental Disease (ortholog); genetic disease (ortholog) X 35140947 35172232 - 30032202 116888417 MODEL JAAIVD010000014;XM_032889689 XP_032745580 protein-coding 626112537 Zbtb26 zinc finger and BTB domain containing 26 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific double-stranded DNA binding (ortholog) 5 15201552 15211552 - 22301074;30032202 116901353 MODEL JAAIVD010000023;XM_032903201;XM_032903202;XM_032903203 XP_032759092;XP_032759093;XP_032759094 zinc finger and BTB domain-containing protein 26 protein-coding 626112549 LOC116895172 nucleophosmin-like 3 82848806 82851089 + 116895172 MODEL JAAIVD010000012 pseudo 626112550 LOC116888138 THO complex subunit 2-like X 107909769 107928218 + 116888138 MODEL JAAIVD010000014;XR_004386292 pseudo 626112566 LOC116896899 uncharacterized LOC116896899 3 108859023 108871629 + 116896899 MODEL JAAIVD010000012;XR_004387375;XR_004387376 ncrna 626112575 LOC116911318 eukaryotic initiation factor 4A-II-like 10 89182738 89184135 - 22301074;30032202 116911318 MODEL JAAIVD010000005;XM_032915231;XM_032915232 XP_032771122;XP_032771123 protein-coding 626112583 Grpel1 GrpE like 1, mitochondrial ENCODES a protein that exhibits ATPase activator activity (ortholog); ATPase binding (ortholog); identical protein binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); middle cerebral artery infarction (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 11 68634913 68641137 - 22301074;30032202 116912144 MODEL JAAIVD010000006;XM_032916058;XM_032916059 XP_032771949;XP_032771950 grpE protein homolog 1, mitochondrial protein-coding 626112595 Bud31 BUD31 spliceosome associated protein ENCODES a protein that exhibits nuclear receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH schistosomiasis (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); microtubule cytoskeleton (ortholog) 16 8147430 8155373 - 22301074;30032202 116885664 MODEL JAAIVD010000004;XM_032886971;XM_032886972;XM_032886973;XM_032886974;XM_032886975;XM_032886976 XP_032742862;XP_032742863;XP_032742864;XP_032742865;XP_032742866;XP_032742867 BUD31 homolog;protein BUD31 homolog protein-coding 626112618 LOC116907156 putative sperm motility kinase W 1 159461874 159463910 - 22301074;30032202 116907156 MODEL JAAIVD010000025;XM_032910117 XP_032766008 protein-coding 626112623 LOC116884475 protocadherin alpha-9 15 7377345 7380213 - 22301074 116884475 MODEL JAAIVD010000010;XM_032885592 XP_032741483 protein-coding 626112628 Orc1 origin recognition complex subunit 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); positive regulation of G0 to G1 transition (ortholog); positive regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); Dwarfism (ortholog); Fetal Growth Retardation (ortholog); FOUND IN chromosome, telomeric region (ortholog); nuclear origin of replication recognition complex (ortholog); nucleoplasm (ortholog) 1 46256396 46276322 - 22301074;30032202 116899111 MODEL JAAIVD010000025;XM_032900632 XP_032756523 protein-coding 626112647 LOC116904772 small nucleolar RNA SNORA17 6 70511702 70511825 - 116904772 MODEL JAAIVD010000024 pseudo 626112648 Dmpk DM1 protein kinase ENCODES a protein that exhibits ATP binding (ortholog); myosin phosphatase regulator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); intracellular calcium ion homeostasis (ortholog); muscle cell apoptotic process (ortholog); ASSOCIATED WITH catecholaminergic polymorphic ventricular tachycardia 1 (ortholog); genetic disease (ortholog); Myotonia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) 2 171530458 171540754 - 22301074;30032202 116892552 MODEL JAAIVD010000001;XM_032894325;XM_032894326;XM_032894327 XP_032750216;XP_032750217;XP_032750218 myotonin-protein kinase protein-coding 626112672 Tgfa transforming growth factor alpha ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; epidermal growth factor/neuregulin signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Mammary Neoplasms (ortholog); Experimental Liver Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 6 60043270 60125221 - 30032202 116903557 MODEL JAAIVD010000024;XM_032906174 XP_032762065 protransforming growth factor alpha protein-coding 626112682 LOC116891340 dystrophia myotonica WD repeat-containing protein-like 2 60425880 60426480 + 116891340 MODEL JAAIVD010000001;XM_032892325 XP_032748216 protein-coding 626112688 LOC116905383 serine protease inhibitor A3L 7 115444664 115458305 + 30032202 116905383 MODEL JAAIVD010000026;XM_032908321;XM_032908322;XM_032908323;XM_032908325;XM_032908326 XP_032764212;XP_032764213;XP_032764214;XP_032764216;XP_032764217 serine protease inhibitor A3N protein-coding 626112707 LOC116914300 store-operated calcium entry regulator STIMATE 13 6526602 6578613 + 30032202 116914300 MODEL JAAIVD010000008;XM_032918541 XP_032774432 protein-coding 626112719 LOC116903594 CXXC motif containing zinc binding protein-like 6 61106183 61106641 - 116903594 MODEL JAAIVD010000024 pseudo 626112720 Edil3 EGF like repeats and discoidin domains 3 INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH osteoarthritis (ortholog) 3 206960534 207458883 - 22301074 116897313 MODEL JAAIVD010000012;XM_032899068;XM_032899069 XP_032754959;XP_032754960 EGF-like repeat and discoidin I-like domain-containing protein 3 protein-coding 626112738 LOC116896083 adhesion G-protein coupled receptor V1-like 3 214911399 214970214 + 22301074;30032202 116896083 MODEL JAAIVD010000012;XM_032897061 XP_032752952 protein-coding 626112755 LOC116888051 40S ribosomal protein S9-like X 87675783 87685527 - 116888051 MODEL JAAIVD010000014 pseudo 626112756 LOC116884005 prolactin-7B1 14 46666292 46676005 - 22301074;30032202 116884005 MODEL JAAIVD010000009;XM_032885242 XP_032741133 protein-coding 626112766 Tnip2 TNFAIP3 interacting protein 2 ENCODES a protein that exhibits polyubiquitin modification-dependent protein binding (ortholog); protein kinase binding (ortholog); INVOLVED IN CD40 signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); interleukin-1-mediated signaling pathway (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 11 70543107 70561823 + 22301074;30032202 116912408 MODEL JAAIVD010000006;XM_032916470 XP_032772361 TNFAIP3-interacting protein 2 protein-coding 626112776 Cfap99 cilia and flagella associated protein 99 11 77169875 77195642 + 116912034 MODEL JAAIVD010000006;XM_032915918 XP_032771809 cilia- and flagella-associated protein 99 protein-coding 626112792 Sfxn1 sideroflexin 1 ENCODES a protein that exhibits L-alanine transmembrane transporter activity (ortholog); L-serine transmembrane transporter activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); iron ion transport (ortholog); L-alanine transport (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Colorectal Neoplasms (ortholog); lung adenocarcinoma (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 14 72440434 72476416 + 22301074;30032202 116883432 MODEL JAAIVD010000009;XM_032884570;XM_032884571 XP_032740461;XP_032740462 sideroflexin-1 protein-coding 626112811 Mdm1 Mdm1 nuclear protein ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of centriole replication (ortholog); retina development in camera-type eye (ortholog); ASSOCIATED WITH Kuhnt-Junius degeneration (ortholog); Neurodevelopmental Disorders (ortholog); retinal degeneration (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 1 196236577 196262850 + 22301074;30032202 116909365 MODEL JAAIVD010000025;XM_032912916;XM_032912924 XP_032768807;XP_032768815 nuclear protein MDM1 protein-coding 626112832 LOC116889515 small nucleolar RNA SNORA17 X 88758982 88759096 + 116889515 MODEL JAAIVD010000014 pseudo 626112833 Nr1d2 nuclear receptor subfamily 1 group D member 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN circadian behavior (ortholog); energy homeostasis (ortholog); lipid homeostasis (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); endometriosis (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 12 87265675 87291642 - 22301074;30032202 116913317 MODEL JAAIVD010000007;XM_032917463 XP_032773354 protein-coding 626112845 B3gnt5 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 5 ENCODES a protein that exhibits lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity (ortholog); INVOLVED IN central nervous system development (ortholog) 4 4631797 4635628 + 22301074;30032202 116898683 MODEL JAAIVD010000003;XM_032899941 XP_032755832 lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase protein-coding 626112850 Ubqln2 ubiquilin 2 ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of clathrin-dependent endocytosis (ortholog); negative regulation of G protein-coupled receptor internalization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 15 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) X 18756942 18760295 + 30032202 116888708 MODEL JAAIVD010000014;XM_032889997 XP_032745888 ubiquilin-2 protein-coding 626112855 LOC116892746 zinc finger protein 54-like 2 180784004 180798378 - 30032202 116892746 MODEL JAAIVD010000001;XM_032894618;XM_032894620;XM_032894621;XM_032894622;XM_032894623;XM_032894624 XP_032750509;XP_032750511;XP_032750512;XP_032750513;XP_032750514;XP_032750515 protein-coding 626112877 LOC116907465 olfactory receptor 143-like 8 31969002 31969958 + 22301074;30032202 116907465 MODEL JAAIVD010000027;XM_032910449 XP_032766340 protein-coding 626112881 Herc1 HECT and RLD domain containing E3 ubiquitin protein ligase family member 1 INVOLVED IN bone mineralization (ortholog); bone remodeling (ortholog); brain development (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 8 60683956 60867638 + 22301074 116908200 MODEL JAAIVD010000027;XM_032911483 XP_032767374 probable E3 ubiquitin-protein ligase HERC1 protein-coding 626112953 LOC116893429 vomeronasal type-2 receptor 116-like 2 175436903 175458199 - 116893429 MODEL JAAIVD010000001 pseudo 626112954 LOC116902259 60S ribosomal protein L39-like 5 142662302 142662490 + 116902259 MODEL JAAIVD010000023 pseudo 626112955 LOC116908029 sodium- and chloride-dependent transporter XTRP3 8 114755088 114794815 - 22301074;30032202 116908029 MODEL JAAIVD010000027;XM_032911294 XP_032767185 protein-coding 626112970 LOC116889866 neutrophil elastase 1 154984497 154986326 - 22301074;30032202 116889866 MODEL JAAIVD010000025;XM_032890691 XP_032746582 protein-coding 626112979 LOC116911809 small nucleolar RNA SNORD44 10 40326112 40326172 + 116911809 MODEL JAAIVD010000005;XR_004389348 snorna 626112982 Nufip2 nuclear FMR1 interacting protein 2 ENCODES a protein that exhibits RNA binding (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 96367720 96392485 + 22301074;30032202 116910225 MODEL JAAIVD010000002;XM_032914116 XP_032770007 nuclear fragile X mental retardation-interacting protein 2 protein-coding 626112990 LOC116908262 40S ribosomal protein S21-like 1 172790226 172790476 - 116908262 MODEL JAAIVD010000025 pseudo 626112991 LOC116883196 60S ribosomal protein L9-like 14 38222610 38247083 - 116883196 MODEL JAAIVD010000009 pseudo 626112992 LOC116902258 zinc finger protein 431-like 5 142650023 142657145 + 22301074 116902258 MODEL JAAIVD010000023;XM_032904677 XP_032760568 protein-coding 626113000 LOC116896952 zinc finger CCCH domain-containing protein 11A-like 3 120688172 120690754 + 22301074 116896952 MODEL JAAIVD010000012;XM_032898522 XP_032754413 protein-coding 626113005 LOC116884398 cytochrome b-c1 complex subunit 7-like 15 63830793 63840267 - 116884398 MODEL JAAIVD010000010 pseudo 626113006 Tm9sf3 transmembrane 9 superfamily member 3 2 40331912 40385804 - 22301074;30032202 116891159 MODEL JAAIVD010000001;XM_032891952;XM_032891953 XP_032747843;XP_032747844 protein-coding 626113028 LOC116888880 60S ribosomal protein L3-like X 14632531 14633711 + 116888880 MODEL JAAIVD010000014 pseudo 626113029 LOC116912162 uncharacterized LOC116912162 11 15070045 15071787 - 116912162 MODEL JAAIVD010000006;XR_004389427 ncrna 626113034 Hmcn1 hemicentin 1 INVOLVED IN actin cytoskeleton organization (ortholog); basement membrane organization (ortholog); response to bacterium (ortholog); ASSOCIATED WITH age related macular degeneration 1 (ortholog); macular degeneration (ortholog); prostate cancer (ortholog); FOUND IN basement membrane (ortholog); cell cortex (ortholog); cell junction (ortholog) 10 30006467 30448658 - 22301074;30032202 116911458 MODEL JAAIVD010000005;XM_032915428 XP_032771319 hemicentin-1 protein-coding 626113145 Kdm3b lysine demethylase 3B PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autism spectrum disorder (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog) 15 9525136 9580530 - 30032202 116884246 MODEL JAAIVD010000010;XM_032885330 XP_032741221 lysine-specific demethylase 3B protein-coding 626113173 Borcs5 BLOC-1 related complex subunit 5 INVOLVED IN lysosome localization (ortholog); nervous system development (ortholog); organelle transport along microtubule (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); colorectal adenocarcinoma (ortholog); FOUND IN axon (ortholog); BORC complex (ortholog); cytoplasmic side of lysosomal membrane (ortholog) 6 14739656 14823211 - 22301074;30032202 116903173 MODEL JAAIVD010000024;XM_032905540;XM_032905541;XM_032905542;XM_032905544 XP_032761431;XP_032761432;XP_032761433;XP_032761435 BLOC-1-related complex subunit 5 protein-coding 626113191 Sele selectin E ENCODES a protein that exhibits oligosaccharide binding (ortholog); phospholipase binding (ortholog); sialic acid binding (ortholog); INVOLVED IN actin filament-based process (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); leukocyte cell-cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); arthritis (ortholog); atopic dermatitis (ortholog); FOUND IN caveola (ortholog); clathrin-coated pit (ortholog); cortical cytoskeleton (ortholog) 10 43278582 43288485 + 22301074;30032202 116911257 MODEL JAAIVD010000005;XM_032915158;XM_032915160 XP_032771049;XP_032771051 E-selectin protein-coding 626113213 Ascc3 activating signal cointegrator 1 complex subunit 3 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN CAT tailing (ortholog); DNA alkylation repair (ortholog); protein monoubiquitination (ortholog); ASSOCIATED WITH Autosomal Recessive Intellectual Developmental Disorder 81 (ortholog); congenital myopathy (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); DNA repair complex (ortholog) 18 48954311 49228615 + 22301074 116887118 MODEL JAAIVD010000013;XM_032888665 XP_032744556 protein-coding 626113261 Celsr1 cadherin EGF LAG seven-pass G-type receptor 1 INVOLVED IN anterior/posterior pattern specification (ortholog); apical protein localization (ortholog); establishment of body hair planar orientation (ortholog); PARTICIPATES IN Wnt signaling, the planar cell polarity pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); long QT syndrome (ortholog); Lymphatic Malformation 9 (ortholog); FOUND IN membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 1 255246197 255332429 - 22301074;30032202 116890108 MODEL JAAIVD010000025;XM_032890853 XP_032746744 protein-coding 626113299 LOC116883576 histone H4 ENCODES a protein that exhibits structural constituent of chromatin (ortholog); INVOLVED IN negative regulation of megakaryocyte differentiation (ortholog); nucleosome assembly (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); FOUND IN CENP-A containing nucleosome (ortholog); nucleosome (ortholog); nucleus (ortholog) 14 42755453 42755997 - 22301074;30032202 116883576 MODEL JAAIVD010000009;XM_032884757 XP_032740648 protein-coding 626113304 LOC116889320 cofilin-1-like X 87107117 87107610 - 116889320 MODEL JAAIVD010000014 pseudo 626113305 Clec5a C-type lectin domain containing 5A ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN innate immune response (ortholog); myeloid cell differentiation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH dengue hemorrhagic fever (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); plasma membrane (ortholog) 6 41402194 41410807 - 30032202 116902694 MODEL JAAIVD010000024;XM_032905049;XM_032905050 XP_032760940;XP_032760941 C-type lectin domain family 5 member A protein-coding 626113315 Fez1 fasciculation and elongation protein zeta 1 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN cellular response to growth factor stimulus (ortholog); establishment of cell polarity (ortholog); establishment of mitochondrion localization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Parkinson's disease (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cell projection (ortholog); centrosome (ortholog) 8 33012099 33056237 + 30032202 116906648 MODEL JAAIVD010000027;XM_032909425;XM_032909426 XP_032765316;XP_032765317 fasciculation and elongation protein zeta-1 protein-coding 626113332 Celf5 CUGBP Elav-like family member 5 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog) 1 153406354 153428204 + 30032202 116904236 MODEL JAAIVD010000025;XM_032907184;XM_032907192;XM_032907200;XM_032907208;XM_032907209;XM_032907212 XP_032763075;XP_032763083;XP_032763091;XP_032763099;XP_032763100;XP_032763103 protein-coding 626113360 Tmub1 transmembrane and ubiquitin like domain containing 1 INVOLVED IN ERAD pathway (ortholog); postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN postsynaptic recycling endosome membrane (ortholog) 6 153638827 153641480 - 22301074 116904209 MODEL JAAIVD010000024;XM_032907134;XM_032907135 XP_032763025;XP_032763026 transmembrane and ubiquitin-like domain-containing protein 1 protein-coding 626113370 LOC116888093 40S ribosomal protein S19-like X 96108358 96110591 - 22301074;30032202 116888093 MODEL JAAIVD010000014;XM_032889460 XP_032745351 protein-coding 626113375 LOC116897614 small nucleolar RNA SNORA17 3 43654435 43654490 + 116897614 MODEL JAAIVD010000012 pseudo 626113376 LOC116899943 U2 spliceosomal RNA 4 149003681 149003817 - 116899943 MODEL JAAIVD010000003 pseudo 626113377 LOC116907696 olfactory receptor 8D2-like 8 32656908 32657837 + 22301074;30032202 116907696 MODEL JAAIVD010000027;XM_032910809 XP_032766700 protein-coding 626113380 Nucb1 nucleobindin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of protein targeting (ortholog); small GTPase-mediated signal transduction (ortholog); ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog); extracellular region (ortholog) 2 154000942 154021211 + 22301074;30032202 116892147 MODEL JAAIVD010000001;XM_032893639;XM_032893640;XM_032893641 XP_032749530;XP_032749531;XP_032749532 nucleobindin-1 protein-coding 626113402 LOC116886590 60S ribosomal protein L13-like 17 3411807 3412375 - 116886590 MODEL JAAIVD010000011 pseudo 626113403 Iqck IQ motif containing K ASSOCIATED WITH Alzheimer's disease (ortholog) 2 82670621 82788474 - 22301074 116891604 MODEL JAAIVD010000001;XM_032892798;XM_032892799;XM_032892800 XP_032748689;XP_032748690;XP_032748691 IQ domain-containing protein K protein-coding 626113422 Ocstamp osteoclast stimulatory transmembrane protein INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); multinuclear osteoclast differentiation (ortholog) 5 152559943 152564204 + 22301074 116901086 MODEL JAAIVD010000023;XM_032902649 XP_032758540 protein-coding 626113427 LOC116885702 NHP2-like protein 1 16 15513394 15513985 + 116885702 MODEL JAAIVD010000004 pseudo 626113428 Khdrbs1 KH RNA binding domain containing, signal transduction associated 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular function inhibitor activity (ortholog); poly(A) binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of RNA export from nucleus (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); Grb2-Sos complex (ortholog); membrane (ortholog) 1 28407985 28433490 + 30032202 116896028 MODEL JAAIVD010000025;XM_032897038 XP_032752929 KH domain-containing, RNA-binding, signal transduction-associated protein 1 protein-coding 626113441 Haus2 HAUS augmin like complex subunit 2 INVOLVED IN centrosome cycle (ortholog); spindle assembly (ortholog); FOUND IN centrosome (ortholog); HAUS complex (ortholog); mitotic spindle microtubule (ortholog) 5 98735228 98747041 + 22301074;30032202 116901842 MODEL JAAIVD010000023;XM_032904023 XP_032759914 HAUS augmin-like complex subunit 2 protein-coding 626113451 Bpifb3 BPI fold containing family B member 3 FOUND IN cytoplasm (ortholog) 5 133252686 133265616 + 1915264;22301074 116900712 MODEL JAAIVD010000023;X60658;XM_032902418 CAA43065;XP_032758309 RYA3 BPI fold-containing family B member 3;potential ligand-binding protein protein-coding 626113469 LOC116913041 U6 spliceosomal RNA 11 66379154 66379253 - 116913041 MODEL JAAIVD010000006 pseudo 626113470 Pde6b phosphodiesterase 6B INVOLVED IN detection of light stimulus (ortholog); entrainment of circadian clock by photoperiod (ortholog); retina development in camera-type eye (ortholog); PARTICIPATES IN altered visual phototransduction pathway; retinitis pigmentosa pathway; visual phototransduction pathway; ASSOCIATED WITH Animal Disease Models (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 1 (ortholog); FOUND IN photoreceptor outer segment (ortholog) 11 18165545 18209340 + 22301074;30032202 116912342 MODEL JAAIVD010000006;XM_032916390 XP_032772281 rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta protein-coding 626113496 Cul4b cullin 4B ENCODES a protein that exhibits damaged DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); gene expression (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); Developmental Disabilities (ortholog); Dwarfism (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); Cul4B-RING E3 ubiquitin ligase complex (ortholog) X 101813684 101843929 + 22301074;30032202 116889393 MODEL JAAIVD010000014;XM_032890495 XP_032746386 cullin-4B protein-coding 626113521 LOC116898362 rho-related GTP-binding protein RhoU-like 4 57940295 58028388 + 116898362 MODEL JAAIVD010000003 pseudo 626113522 LOC116888148 AP-1 complex-associated regulatory protein-like X 109718259 109726215 + 116888148 MODEL JAAIVD010000014 pseudo 626113523 LOC116903219 sentrin-specific protease 2-like 6 19557041 19558470 - 116903219 MODEL JAAIVD010000024 pseudo 626113524 Ppp3r2 protein phosphatase 3 regulatory subunit B, beta ENCODES a protein that exhibits calcium-dependent protein serine/threonine phosphatase regulator activity (ortholog); INVOLVED IN penetration of zona pellucida (ortholog); PARTICIPATES IN calcineurin signaling pathway; ASSOCIATED WITH traumatic brain injury (ortholog); FOUND IN calcineurin complex (ortholog); sperm flagellum (ortholog); sperm midpiece (ortholog) 7 57213577 57214867 + 22301074;30032202 116904996 MODEL JAAIVD010000026;XM_032907680 XP_032763571 calcineurin subunit B type 2 protein-coding 626113530 LOC116899177 60S ribosomal protein L35-like 4 87624999 87625382 + 116899177 MODEL JAAIVD010000003 pseudo 626113531 Col5a3 collagen type V alpha 3 chain ENCODES a protein that exhibits heparin binding (ortholog); proteoglycan binding (ortholog); INVOLVED IN cell-matrix adhesion (ortholog); ASSOCIATED WITH keratoconus (ortholog); Prostatic Neoplasms (ortholog); FOUND IN collagen type V trimer (ortholog); extracellular matrix (ortholog) 8 17033364 17077993 - 22301074 116907239 MODEL JAAIVD010000027;XM_032910200 XP_032766091 collagen alpha-3(V) chain protein-coding 626113602 LOC116900027 60S ribosomal protein L28-like 5 11768577 11770621 + 116900027 MODEL JAAIVD010000023 pseudo 626113603 LOC116895330 rho GTPase-activating protein 20-like 3 35163162 35170997 + 30032202 116895330 MODEL JAAIVD010000012;XM_032896637 XP_032752528 protein-coding 626113613 LOC116890529 small nucleolar RNA SNORA17 1 37963200 37963333 - 116890529 MODEL JAAIVD010000025;XR_004386710 snorna 626113616 Babam1 BRISC and BRCA1 A complex member 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); double-strand break repair (ortholog); hematopoietic stem cell proliferation (ortholog); ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN BRCA1-A complex (ortholog); BRISC complex (ortholog); cytoplasm (ortholog) 13 13598371 13604566 - 30032202 116915107 MODEL JAAIVD010000008;XM_032919536 XP_032775427 BRISC and BRCA1-A complex member 1 protein-coding 626113629 Rad21l1 RAD21 cohesin complex component like 1 INVOLVED IN double-strand break repair (ortholog); double-strand break repair via homologous recombination (ortholog); fertilization (ortholog); ASSOCIATED WITH spermatogenic failure 3 (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); lateral element (ortholog) 5 131021065 131047977 - 22301074;30032202 116900690 MODEL JAAIVD010000023;XM_032902392 XP_032758283 double-strand-break repair protein rad21-like protein 1 protein-coding 626113647 LOC116898184 vomeronasal type-2 receptor 116-like 4 132426671 132486648 + 22301074;30032202 116898184 MODEL JAAIVD010000003;XM_032899547 XP_032755438 protein-coding 626113655 LOC116895805 Fc receptor-like protein 5 3 66100871 66122169 - 30032202 116895805 MODEL JAAIVD010000012;XM_032896944 XP_032752835 protein-coding 626113669 LOC116897439 U6 spliceosomal RNA 3 53421682 53421782 - 116897439 MODEL JAAIVD010000012 pseudo 626113670 LOC116898552 spindlin-2-like 4 154737875 154738584 + 116898552 MODEL JAAIVD010000003 pseudo 626113671 Ass1 argininosuccinate synthase 1 ENCODES a protein that exhibits amino acid binding (ortholog); argininosuccinate synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acute-phase response (ortholog); argininosuccinate metabolic process (ortholog); aspartate metabolic process (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); Acute-Phase Reaction (ortholog); adult-onset type II citrullinemia (ortholog); FOUND IN cell body fiber (ortholog); cytosol (ortholog); mitochondrial outer membrane (ortholog) 5 4113958 4162695 - 22301074;30032202 116900051 MODEL JAAIVD010000023;XM_032901845 XP_032757736 argininosuccinate synthase protein-coding 626113691 Stk38l serine/threonine kinase 38 like ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of autophagy (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH retinal degeneration (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 4393808 4447166 + 22301074;30032202 116903093 MODEL JAAIVD010000024;XM_032905414;XM_032905415 XP_032761305;XP_032761306 serine/threonine-protein kinase 38-like protein-coding 626113711 LOC116888251 U1 small nuclear ribonucleoprotein C-like X 118104294 118104775 + 116888251 MODEL JAAIVD010000014 pseudo 626113712 Egf epidermal growth factor ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); growth factor activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); epidermal growth factor receptor signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; ceramide signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); AIDS-Associated Nephropathy (ortholog); FOUND IN extracellular exosome (ortholog); extracellular space (ortholog); plasma membrane (ortholog) 3 29553123 29632437 + 22301074 116896266 MODEL JAAIVD010000012;XM_032897342 XP_032753233 pro-epidermal growth factor protein-coding 626113740 Mat1a methionine adenosyltransferase 1A ENCODES a protein that exhibits ADP binding (ortholog); amino acid binding (ortholog); ATP binding (ortholog); INVOLVED IN L-methionine catabolic process (ortholog); protein homotetramerization (ortholog); protein-containing complex assembly (ortholog); PARTICIPATES IN methionine cycle/metabolic pathway; ASSOCIATED WITH amino acid metabolic disorder (ortholog); brain disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN methionine adenosyltransferase complex (ortholog); nuclear matrix (ortholog) 13 19628117 19645540 + 22301074;30032202 116914463 MODEL JAAIVD010000008;XM_032918764 XP_032774655 S-adenosylmethionine synthase protein-coding 626113753 Ddx50 DExD-box helicase 50 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleolus (ortholog); plasma membrane (ortholog) 18 28442361 28473191 - 22301074;30032202 116886884 MODEL JAAIVD010000013;XM_032888341;XM_032888342 XP_032744232;XP_032744233 ATP-dependent RNA helicase DDX50 protein-coding 626113775 Lrp1 LDL receptor related protein 1 ENCODES a protein that exhibits alpha-2 macroglobulin receptor activity (ortholog); apolipoprotein binding (ortholog); calcium ion binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); amyloid-beta clearance by cellular catabolic process (ortholog); amyloid-beta clearance by transcytosis (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN apical part of cell (ortholog); axonal growth cone (ortholog); basolateral plasma membrane (ortholog) 1 205988653 206069334 - 22301074 116910184 MODEL JAAIVD010000025;XM_032914049 XP_032769940 prolow-density lipoprotein receptor-related protein 1 protein-coding 626113868 LOC116890896 cytochrome c oxidase subunit 8B, mitochondrial 2 8585327 8586819 + 22301074;30032202 116890896 MODEL JAAIVD010000001;XM_032891516 XP_032747407 protein-coding 626113874 LOC116902833 uncharacterized LOC116902833 1 120843700 120847796 - 116902833 MODEL JAAIVD010000025;XR_004388239;XR_004388241;XR_004388242 ncrna 626113883 LOC116906961 olfactory receptor 147-like 8 32601546 32602499 + 22301074;30032202 116906961 MODEL JAAIVD010000027;XM_032909882 XP_032765773 protein-coding 626113886 LOC116906850 dipeptidyl peptidase 3-like 8 10690818 10693023 - 116906850 MODEL JAAIVD010000027;XR_004388777 pseudo 626113889 LOC116912928 U6 spliceosomal RNA 11 66507685 66507787 + 116912928 MODEL JAAIVD010000006;XR_004389499 snrna 626113892 Ap1ar adaptor related protein complex 1 associated regulatory protein ENCODES a protein that exhibits AP-1 adaptor complex binding (ortholog); kinesin binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); negative regulation of cell motility (ortholog); negative regulation of receptor recycling (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); transport vesicle (ortholog) 3 31503122 31534653 + 22301074;30032202 116896271 MODEL JAAIVD010000012;XM_032897349;XM_032897350 XP_032753240;XP_032753241 AP-1 complex-associated regulatory protein protein-coding 626113909 Ehd2 EH domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); endocytosis (ortholog); FOUND IN caveola (ortholog); cytosol (ortholog); membrane (ortholog) 2 173017964 173036608 - 22301074;30032202 116892611 MODEL JAAIVD010000001;XM_032894414 XP_032750305 EH domain-containing protein 2 protein-coding 626113919 LOC116908282 vomeronasal type-1 receptor 4-like 8 34180180 34181094 + 22301074;30032202 116908282 MODEL JAAIVD010000027;XM_032911541 XP_032767432 protein-coding 626113922 Ssbp4 single stranded DNA binding protein 4 13 12844180 12855038 - 22301074;30032202 116914680 MODEL JAAIVD010000008;XM_032919095 XP_032774986 single-stranded DNA-binding protein 4 protein-coding 626113942 Klc1 kinesin light chain 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN axo-dendritic transport (ortholog); intracellular protein transport (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Leukoaraiosis (ortholog); relapsing-remitting multiple sclerosis (ortholog); FOUND IN axon (ortholog); ciliary rootlet (ortholog); cytoplasm (ortholog) 7 129359580 129404304 + 22301074;30032202 116905499 MODEL JAAIVD010000026;XM_032908507;XM_032908508;XM_032908509;XM_032908510;XM_032908511;XM_032908512;XM_032908513;XM_032908514;XM_032908516;XM_032908517;XM_032908518;XM_032908519 XP_032764398;XP_032764399;XP_032764400;XP_032764401;XP_032764402;XP_032764403;XP_032764404;XP_032764405;XP_032764407;XP_032764408;XP_032764409;XP_032764410 protein-coding 626113981 LOC116895699 uncharacterized LOC116895699 3 86106119 86151647 - 116895699 MODEL JAAIVD010000012;XR_004387303 ncrna 626113986 LOC116906131 ubiquitin-conjugating enzyme E2 E3-like 7 86936927 86937527 + 116906131 MODEL JAAIVD010000026 pseudo 626113987 LOC116908442 U2 spliceosomal RNA 8 24556004 24556154 - 116908442 MODEL JAAIVD010000027 pseudo 626113988 Plekho2 pleckstrin homology domain containing O2 INVOLVED IN macrophage apoptotic process (ortholog); ASSOCIATED WITH carotid stenosis (ortholog); colorectal cancer (ortholog) 8 59869196 59896113 - 30032202 116907733 MODEL JAAIVD010000027;XM_032910860 XP_032766751 pleckstrin homology domain-containing family O member 2 protein-coding 626113998 LOC116887378 40S ribosomal protein S2-like 18 9495838 9496712 - 116887378 MODEL JAAIVD010000013 pseudo 626113999 LOC116895892 40S ribosomal protein S6-like 3 115744014 115787264 - 116895892 MODEL JAAIVD010000012 pseudo 626114000 Pthlh parathyroid hormone like hormone ENCODES a protein that exhibits hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); bone mineralization (ortholog); endochondral ossification (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH achondroplasia (ortholog); acute necrotizing pancreatitis (ortholog); alcoholic pancreatitis (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 6 4929100 4940124 - 22301074;30032202 116904510 MODEL JAAIVD010000024;XM_032907300;XM_032907301 XP_032763191;XP_032763192 parathyroid hormone-related protein protein-coding 626114011 Bhlhe22 basic helix-loop-helix family member e22 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN amacrine cell differentiation (ortholog); anterior commissure morphogenesis (ortholog); central nervous system projection neuron axonogenesis (ortholog); FOUND IN nucleus (ortholog) 3 136013239 136016811 - 22301074 116897010 MODEL JAAIVD010000012;XM_032898615 XP_032754506 class E basic helix-loop-helix protein 22 protein-coding 626114016 LOC116908434 U1 spliceosomal RNA 8 16691178 16691339 + 116908434 MODEL JAAIVD010000027;XR_004388964 snrna 626114019 Dcaf12 DDB1 and CUL4 associated factor 12 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN miRNA-mediated gene silencing by mRNA destabilization (ortholog); regulation of autophagy (ortholog); spermatogenesis (ortholog); FOUND IN centrosome (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 1 4237580 4256796 + 22301074;30032202 116891407 MODEL JAAIVD010000025;XM_032892438 XP_032748329 DDB1- and CUL4-associated factor 12 protein-coding 626114032 Snai1 snail family transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); E-box binding (ortholog); kinase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cartilage morphogenesis (ortholog); epithelial cell migration (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Breast Neoplasms (ortholog); cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 5 150462095 150466774 - 30032202 116900762 MODEL JAAIVD010000023;XM_032902473 XP_032758364 zinc finger protein SNAI1 protein-coding 626114039 Lmln leishmanolysin like peptidase ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog) 4 17863507 17921535 + 22301074;30032202 116898789 MODEL JAAIVD010000003;XM_032900133 XP_032756024 leishmanolysin-like peptidase protein-coding 626114059 Col9a3 collagen type IX alpha 3 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN female gonad development (ortholog); male gonad development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Autoinflammation, Immune Dysregulation, and Eosinophilia (ortholog); connective tissue disease (ortholog); genetic disease (ortholog); FOUND IN collagen type IX trimer (ortholog) 5 157699191 157721262 + 116902415 MODEL JAAIVD010000023;XM_032904946 XP_032760837 collagen alpha-3(IX) chain protein-coding 626114095 Nhlrc2 NHL repeat containing 2 ASSOCIATED WITH FINCA Syndrome (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 2 59566108 59616364 - 22301074 116891331 MODEL JAAIVD010000001;XM_032892262 XP_032748153 NHL repeat-containing protein 2 protein-coding 626114110 Rgs16 regulator of G protein signaling 16 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 10 33192082 33197341 + 116911422 MODEL JAAIVD010000005;XM_032915388 XP_032771279 regulator of G-protein signaling 16 protein-coding 626114119 Hilpda hypoxia inducible lipid droplet associated ENCODES a protein that exhibits signaling receptor binding (ortholog); INVOLVED IN autocrine signaling (ortholog); cellular response to hypoxia (ortholog); positive regulation of cell population proliferation (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); hepatocellular carcinoma (ortholog); lung metastasis (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); lipid droplet (ortholog) 6 110290155 110292917 - 22301074;30032202 116904424 MODEL JAAIVD010000024;XM_032907263 XP_032763154 hypoxia-inducible lipid droplet-associated protein protein-coding 626114125 LOC116913010 small nucleolar RNA SNORA76 11 1935396 1935527 + 116913010 MODEL JAAIVD010000006;XR_004389564 snorna 626114128 Eras ES cell expressed Ras X 14209974 14210957 + 22301074;30032202 116888962 MODEL JAAIVD010000014;XM_032890194 XP_032746085 GTPase ERas protein-coding 626114133 Nlrp14 NLR family pyrin domain containing 14 INVOLVED IN spermatogenesis (ortholog); ASSOCIATED WITH spermatogenic failure (ortholog) 2 105306715 105324659 + 22301074;30032202 116894176 MODEL JAAIVD010000001;XM_032895893 XP_032751784 NACHT, LRR and PYD domains-containing protein 14 protein-coding 626114145 Tgfbr2 transforming growth factor beta receptor 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); kinase activator activity (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); animal organ regeneration (ortholog); aorta morphogenesis (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH aortic aneurysm (ortholog); arteriosclerosis (ortholog); bone disease (ortholog); FOUND IN caveola (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 8 107349079 107438182 - 22301074;30032202 116907872 MODEL JAAIVD010000027;XM_032911061 XP_032766952 TGF-beta receptor type-2 protein-coding 626114156 LOC116914397 claudin-22 13 40205481 40206378 - 30032202 116914397 MODEL JAAIVD010000008;XM_032918624 XP_032774515 protein-coding 626114160 Mios meiosis regulator for oocyte development INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to nutrient levels (ortholog); central nervous system myelin formation (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cell junction (ortholog); cytosol (ortholog); GATOR2 complex (ortholog) 6 130160688 130186423 - 22301074;30032202 116904082 MODEL JAAIVD010000024;XM_032906948;XM_032906949 XP_032762839;XP_032762840 GATOR complex protein MIOS protein-coding 626114177 LOC116889239 60S ribosomal protein L5-like X 45578334 45579226 - 116889239 MODEL JAAIVD010000014 pseudo 626114178 Lrrc71 leucine rich repeat containing 71 3 65812006 65822729 + 22301074 116896719 MODEL JAAIVD010000012;XM_032898136;XM_032898137 XP_032754027;XP_032754028 leucine-rich repeat-containing protein 71 protein-coding 626114199 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 8 114654116 114654188 - 116908474 MODEL JAAIVD010000027 trna 626114200 Rnf216 ring finger protein 216 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein catabolic process, modulating synaptic transmission (ortholog); protein K48-linked ubiquitination (ortholog); ASSOCIATED WITH genetic disease (ortholog); Gordon Holmes syndrome (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 16 10031196 10153781 + 22301074 116885971 MODEL JAAIVD010000004;XM_032887309;XM_032887310;XM_032887311;XM_032887312 XP_032743200;XP_032743201;XP_032743202;XP_032743203 E3 ubiquitin-protein ligase RNF216 protein-coding 626114229 LOC116903904 TRPM8 channel-associated factor 1 6 98304619 98347682 - 30032202 116903904 MODEL JAAIVD010000024;XM_032906672 XP_032762563 protein-coding 626114242 LOC116903936 cornifin-B-like 6 28445774 28446966 + 116903936 MODEL JAAIVD010000024;XM_032906713 XP_032762604 protein-coding 626114248 Stx6 syntaxin 6 ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN endocytic recycling (ortholog); endosome organization (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH neuronal ceroid lipofuscinosis 6A (ortholog); progressive supranuclear palsy (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) 10 34581168 34625048 + 22301074 116910988 MODEL JAAIVD010000005;XM_032914700 XP_032770591 syntaxin-6 protein-coding 626114260 Espl1 extra spindle pole bodies like 1, separase ENCODES a protein that exhibits cysteine-type peptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN chromosome segregation (ortholog); homologous chromosome segregation (ortholog); meiosis I (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN centrosome (ortholog) 1 260757209 260783729 - 22301074;30032202 116883510 MODEL JAAIVD010000025;XM_032884685 XP_032740576 separin protein-coding 626114295 LOC116914103 U1 spliceosomal RNA 12 66997234 66997381 + 116914103 MODEL JAAIVD010000007 pseudo 626114296 Secisbp2 SECIS binding protein 2 ENCODES a protein that exhibits DNA binding (ortholog); mRNA 3'-UTR binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN forebrain neuron development (ortholog); mRNA stabilization (ortholog); negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); ASSOCIATED WITH Abnormal Thyroid Hormone Metabolism 1 (ortholog); amino acid metabolic disorder (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); ribonucleoprotein complex (ortholog) 14 70023516 70054639 + 30032202 116883381 MODEL JAAIVD010000009;XM_032884496;XM_032884497;XM_032884498;XM_032884499 XP_032740387;XP_032740388;XP_032740389;XP_032740390 selenocysteine insertion sequence-binding protein 2 protein-coding 626114331 LOC116912194 UDP-glucuronosyltransferase 2B17 11 1625687 1642057 + 22301074 116912194 MODEL JAAIVD010000006;XM_032916128;XM_032916129 XP_032772019;XP_032772020 protein-coding 626114345 LOC116895073 small nucleolar RNA SNORA40 2 179331362 179331495 - 116895073 MODEL JAAIVD010000001;XR_004387242 snorna 626114348 Lrmda leucine rich melanocyte differentiation associated INVOLVED IN melanocyte differentiation (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); oculocutaneous albinism type VII (ortholog) 12 91791536 92396783 + 22301074;30032202 116913907 MODEL JAAIVD010000007;XM_032918183 XP_032774074 leucine-rich melanocyte differentiation-associated protein protein-coding 626114358 Pwp2 PWP2 small subunit processome component INVOLVED IN ribosomal small subunit biogenesis (ortholog); FOUND IN small-subunit processome (ortholog) 18 1452542 1466156 - 22301074;30032202 116887172 MODEL JAAIVD010000013;XM_032888722 XP_032744613 periodic tryptophan protein 2 homolog protein-coding 626114383 LOC116887821 uncharacterized LOC116887821 X 33513819 33519140 + 116887821 MODEL JAAIVD010000014 pseudo 626114384 LOC116895630 caspase-6-like 3 174745812 174747036 - 22301074;30032202 116895630 MODEL JAAIVD010000012;XM_032896838 XP_032752729 protein-coding 626114389 LOC116897777 carbonic anhydrase 15 4 3102491 3105414 - 22301074;30032202 116897777 MODEL JAAIVD010000003;XM_032899204 XP_032755095 protein-coding 626114401 LOC116909956 60S ribosomal protein L32-like 9 23780909 23781361 + 116909956 MODEL JAAIVD010000002 pseudo 626114402 LOC116883969 40S ribosomal protein S18-like 1 207680736 207682921 + 116883969 MODEL JAAIVD010000025 pseudo 626114403 Rabggta Rab geranylgeranyltransferase subunit alpha ENCODES a protein that exhibits Rab geranylgeranyltransferase activity (ortholog); small GTPase binding (ortholog); INVOLVED IN protein geranylgeranylation (ortholog); ASSOCIATED WITH Hermansky-Pudlak syndrome (ortholog); FOUND IN Rab-protein geranylgeranyltransferase complex (ortholog) 12 69286459 69294100 + 22301074;30032202 116913560 MODEL JAAIVD010000007;XM_032917769;XM_032917770;XM_032917771 XP_032773660;XP_032773661;XP_032773662 geranylgeranyl transferase type-2 subunit alpha protein-coding 626114432 Rhbdd3 rhomboid domain containing 3 INVOLVED IN liver development (ortholog); MAPK cascade (ortholog); negative regulation of natural killer cell activation (ortholog); ASSOCIATED WITH substance-related disorder (ortholog) 11 74075166 74081442 + 22301074;30032202 116912838 MODEL JAAIVD010000006;XM_032917029;XM_032917030;XM_032917031;XM_032917032;XM_032917033 XP_032772920;XP_032772921;XP_032772922;XP_032772923;XP_032772924 rhomboid domain-containing protein 3 protein-coding 626114459 Rmp24 ribonuclease MRP subunit p24 15 19367224 19374718 - 116884615 MODEL JAAIVD010000010;XM_032885755;XM_032885756 XP_032741646;XP_032741647 C15H18orf21 UPF0711 protein C18orf21 homolog;chromosome 15 C18orf21 homolog protein-coding 626114472 Trnag-gcc transfer RNA glycine (anticodon GCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 17 30340871 30340941 - 116886802 MODEL JAAIVD010000011 trna 626114473 LOC116907387 thrombospondin type-1 domain-containing protein 4-like 8 53814111 53827370 - 30032202 116907387 MODEL JAAIVD010000027;XM_032910340 XP_032766231 protein-coding 626114481 LOC116888613 protocadherin-11 X-linked X 73688782 73973441 + 22301074 116888613 MODEL JAAIVD010000014;XM_032889912 XP_032745803 protein-coding 626114489 LOC116900464 olfactory receptor 4A15-like 5 71279269 71280164 - 116900464 MODEL JAAIVD010000023 pseudo 626114490 LOC116895398 thymosin beta-4-like 3 60192950 60193081 + 116895398 MODEL JAAIVD010000012 pseudo 626114491 LOC116904546 killer cell lectin-like receptor 5 6 17094263 17119757 - 116904546 MODEL JAAIVD010000024;XM_032907340 XP_032763231 protein-coding 626114499 LOC116895463 lys-63-specific deubiquitinase BRCC36-like 3 83604413 83605287 + 116895463 MODEL JAAIVD010000012 pseudo 626114500 Flt4 fms related receptor tyrosine kinase 4 ENCODES a protein that exhibits growth factor binding (ortholog); protein homodimerization activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); lung alveolus development (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway; altered vascular endothelial growth factor signaling pathway involving the main players; axitinib pharmacodynamics pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); colon carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 9 32222719 32263832 + 22301074;30032202 116910111 MODEL JAAIVD010000002;XM_032913942 XP_032769833 vascular endothelial growth factor receptor 3 protein-coding 626114533 LOC116905719 dnaJ homolog subfamily B member 6-like 7 72839814 72840504 - 116905719 MODEL JAAIVD010000026 pseudo 626114534 Lrif1 ligand dependent nuclear receptor interacting factor 1 INVOLVED IN dosage compensation by inactivation of X chromosome (ortholog); ASSOCIATED WITH facioscapulohumeral muscular dystrophy 3 (ortholog); FOUND IN Barr body (ortholog); centriolar satellite (ortholog); chromosome, telomeric region (ortholog) 3 51490831 51603213 - 22301074;30032202 116896399 MODEL JAAIVD010000012;XM_032897536;XM_032897537;XM_032897538 XP_032753427;XP_032753428;XP_032753429 ligand-dependent nuclear receptor-interacting factor 1 protein-coding 626114548 Snorc secondary ossification center associated regulator of chondrocyte maturation INVOLVED IN cartilage development (ortholog); FOUND IN cell periphery (ortholog) 4 159597437 159600008 + 22301074;30032202 116898568 MODEL JAAIVD010000003;XM_032899774 XP_032755665 protein SNORC protein-coding 626114554 Abo ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase ENCODES a protein that exhibits alpha-1,3-galactosyltransferase activity (ortholog); antigen binding (ortholog); fucosylgalactoside 3-alpha-galactosyltransferase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); negative regulation of apoptotic process (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); Adenoviridae Infections (ortholog) 5 9802285 9832264 + 22301074;30032202 116901257 MODEL JAAIVD010000023;XM_032903014;XR_004387968 XP_032758905 histo-blood group ABO system transferase protein-coding 626114567 Hcfc1 host cell factor C1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autistic disorder (ortholog); Emery-Dreifuss muscular dystrophy (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) X 128562581 128634555 + 22301074;30032202 116888215 MODEL JAAIVD010000014;XM_032889509 XP_032745400 host cell factor 1 protein-coding 626114597 Pgrmc2 progesterone receptor membrane component 2 ENCODES a protein that exhibits heme binding (ortholog); heme transmembrane transporter activity (ortholog); INVOLVED IN adipose tissue development (ortholog); heme transport (ortholog); ASSOCIATED WITH Hirschsprung's disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); glutamatergic synapse (ortholog); nuclear envelope (ortholog) 3 112852309 112869213 + 30032202 116896905 MODEL JAAIVD010000012;XM_032898458 XP_032754349 membrane-associated progesterone receptor component 2 protein-coding 626114604 LOC116899654 aquaporin-12 4 164948369 164953156 + 22301074;30032202 116899654 MODEL JAAIVD010000003;XM_032901662 XP_032757553 protein-coding 626114610 LOC116894010 olfactory receptor 51B2-like 2 101732702 101733628 + 22301074 116894010 MODEL JAAIVD010000001;XM_032895726 XP_032751617 protein-coding 626114613 Med30 mediator complex subunit 30 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); transcription coregulator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 1 227222079 227245106 + 30032202 116911381 MODEL JAAIVD010000025;XM_032915333;XM_032915341 XP_032771224;XP_032771232 mediator of RNA polymerase II transcription subunit 30 protein-coding 626114622 Mllt11 MLLT11 transcription factor 7 cofactor INVOLVED IN extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 3 62020319 62029113 + 30032202 116896560 MODEL JAAIVD010000012;XM_032897755 XP_032753646 protein AF1q protein-coding 626114628 LOC116900248 olfactory receptor 8K5-like 5 63014129 63015070 + 22301074;30032202 116900248 MODEL JAAIVD010000023;XM_032902000 XP_032757891 protein-coding 626114631 Gba2 glucosylceramidase beta 2 ENCODES a protein that exhibits beta-glucosidase activity (ortholog); glucosylceramidase activity (ortholog); glucosyltransferase activity (ortholog); INVOLVED IN bile acid metabolic process (ortholog); central nervous system neuron development (ortholog); cholesterol metabolic process (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 1 2918525 2930146 + 22301074;30032202 116890983 MODEL JAAIVD010000025;XM_032891660 XP_032747551 non-lysosomal glucosylceramidase protein-coding 626114652 LOC116895891 heat shock 70 kDa protein 4L-like 3 114524833 114555405 - 22301074;30032202 116895891 MODEL JAAIVD010000012;XM_032896980 XP_032752871 protein-coding 626114669 Osgin1 oxidative stress induced growth inhibitor 1 ENCODES a protein that exhibits growth factor activity (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 17 39084621 39093009 + 116886313 MODEL JAAIVD010000011;XM_032887755 XP_032743646 oxidative stress-induced growth inhibitor 1 protein-coding 626114679 Usp50 ubiquitin specific peptidase 50 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); ubiquitin-like protein peptidase activity (ortholog); INVOLVED IN nuclear speck organization (ortholog); positive regulation of interleukin-1 beta production (ortholog); positive regulation of interleukin-18 production (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nucleus (ortholog) 5 105595900 105618904 - 22301074;30032202 116901920 MODEL JAAIVD010000023;XM_032904141 XP_032760032 inactive ubiquitin carboxyl-terminal hydrolase 50 protein-coding 626114688 Fundc2 FUN14 domain containing 2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN intracellular triglyceride homeostasis (ortholog); regulation of platelet activation (ortholog); FOUND IN mitochondrion (ortholog) 15 34772976 34778871 + 30032202 116884472 MODEL JAAIVD010000010;XM_032885584;XM_032885585;XM_032885586;XM_032885587 XP_032741475;XP_032741476;XP_032741477;XP_032741478 FUN14 domain-containing protein 2 protein-coding 626114711 LOC116884762 peptidyl-prolyl cis-trans isomerase D-like 15 34900764 34902140 - 116884762 MODEL JAAIVD010000010 pseudo 626114712 LOC116887365 olfactory receptor 1G1-like 18 10293525 10294454 + 22301074;30032202 116887365 MODEL JAAIVD010000013;XM_032888961 XP_032744852 protein-coding 626114715 B3gnt9 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 9 ASSOCIATED WITH rheumatoid arthritis (ortholog) 17 24979659 24982245 - 22301074;30032202 116886046 MODEL JAAIVD010000011;XM_032887350 XP_032743241 protein-coding 626114721 LOC116893078 teratocarcinoma-derived growth factor-like 2 44681688 44682222 - 116893078 MODEL JAAIVD010000001 pseudo 626114722 LOC116889823 U2 spliceosomal RNA 116889823 MODEL JAAIVD010001266;XR_004386512 snrna 626114723 Sstr4 somatostatin receptor 4 ENCODES a protein that exhibits somatostatin receptor activity (ortholog); INVOLVED IN cell migration (ortholog); cellular response to glucocorticoid stimulus (ortholog); forebrain development (ortholog); PARTICIPATES IN cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; famotidine pharmacodynamics pathway; ASSOCIATED WITH Brain Injuries (ortholog); Glucagonoma (ortholog); status epilepticus (ortholog) 5 127960551 127963139 + 22301074;30032202 116902072 MODEL JAAIVD010000023;XM_032904361 XP_032760252 somatostatin receptor type 4 protein-coding 626114728 Dpysl5 dihydropyrimidinase like 5 INVOLVED IN negative regulation of dendrite morphogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 7 23279296 23365202 - 22301074;30032202 116905999 MODEL JAAIVD010000026;XM_032909037 XP_032764928 dihydropyrimidinase-related protein 5 protein-coding 626114745 Ankdd1a ankyrin repeat and death domain containing 1A 8 59811923 59830881 - 22301074 116908199 MODEL JAAIVD010000027;XM_032911482 XP_032767373 ankyrin repeat and death domain-containing protein 1A protein-coding 626114762 LOC116887866 uncharacterized LOC116887866 X 45780486 45785613 + 116887866 MODEL JAAIVD010000014 pseudo 626114763 Cage1 cancer antigen 1 14 57040318 57078797 - 116883817 MODEL JAAIVD010000009;XM_032885067;XM_032885068;XM_032885069;XM_032885070 XP_032740958;XP_032740959;XP_032740960;XP_032740961 cancer-associated gene 1 protein protein-coding 626114786 Arl14epl ARF like GTPase 14 effector protein like ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 15 40080969 40087190 - 116884334 MODEL JAAIVD010000010;XM_032885469 XP_032741360 ADP ribosylation factor like GTPase 14 effector protein like;ARL14 effector protein-like protein-coding 626114791 LOC116897550 small nucleolar RNA SNORA17 3 103613401 103613520 + 116897550 MODEL JAAIVD010000012 pseudo 626114792 LOC116885075 U4 spliceosomal RNA 15 78022260 78022399 + 116885075 MODEL JAAIVD010000010;XR_004385949 snrna 626114795 LOC116895808 aminoacyl tRNA synthase complex-interacting multifunctional protein 1-like 3 66548077 66550484 + 116895808 MODEL JAAIVD010000012 pseudo 626114796 LOC116910698 small nucleolar RNA SNORA48 9 42672151 42672294 - 116910698 MODEL JAAIVD010000002;XR_004389226 snorna 626114799 LOC116889929 olfactory receptor 6C6-like 1 160949241 160950182 - 116889929 MODEL JAAIVD010000025 pseudo 626114800 Art5 ADP-ribosyltransferase 5 ENCODES a protein that exhibits NAD+ nucleosidase activity (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); FOUND IN membrane (ortholog) 2 100397947 100407569 - 22301074;30032202 116893972 MODEL JAAIVD010000001;XM_032895690;XM_032895691 XP_032751581;XP_032751582 ecto-ADP-ribosyltransferase 5 protein-coding 626114815 Ttc5 tetratricopeptide repeat domain 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); ribosome binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); DNA damage response (ortholog); positive regulation of mRNA catabolic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH CEREBRAL ATROPHY AND VARIABLE FACIAL DYSMORPHISM (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 12 72524416 72542439 + 22301074 116913595 MODEL JAAIVD010000007;XM_032917841;XM_032917842;XM_032917843 XP_032773732;XP_032773733;XP_032773734 tetratricopeptide repeat protein 5 protein-coding 626114835 LOC116890501 small nucleolar RNA SNORA48 1 72836059 72836198 - 116890501 MODEL JAAIVD010000025;XR_004386687 snorna 626114838 LOC116904715 small nucleolar RNA SNORA17 6 113656072 113656201 - 116904715 MODEL JAAIVD010000024;XR_004388409 snorna 626114841 Slc35b2 solute carrier family 35 member B2 ENCODES a protein that exhibits 3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate transport (ortholog); 5'-adenylyl sulfate transmembrane transport (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 26 (ortholog); spondyloepimetaphyseal dysplasia with joint laxity (ortholog); Treacher Collins syndrome 3 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) 4 84328271 84331918 - 22301074;30032202 116899131 MODEL JAAIVD010000003;XM_032900664 XP_032756555 adenosine 3'-phospho 5'-phosphosulfate transporter 1 protein-coding 626114849 Gfra3 GDNF family receptor alpha 3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); glial cell-derived neurotrophic factor receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); neuron development (ortholog); ASSOCIATED WITH prostate cancer (ortholog); sciatic neuropathy (ortholog); FOUND IN cytosol (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 15 9635457 9662795 + 22301074;30032202 116884839 MODEL JAAIVD010000010;XM_032886076 XP_032741967 GDNF family receptor alpha-3 protein-coding 626114861 LOC116897516 small nucleolar RNA SNORA51 3 116445562 116445694 + 116897516 MODEL JAAIVD010000012;XR_004387534 snorna 626114864 LOC116907863 uncharacterized LOC116907863 8 27204975 27214165 - 116907863 MODEL JAAIVD010000027;XR_004388849;XR_004388850 ncrna 626114873 LOC116895912 TD and POZ domain-containing protein 2-like 3 120763948 120765050 - 116895912 MODEL JAAIVD010000012 pseudo 626114874 LOC116883557 histone H1.4 14 42636720 42637520 - 22301074 116883557 MODEL JAAIVD010000009;XM_032884737 XP_032740628 protein-coding 626114879 Ubald2 UBA like domain containing 2 9 67639543 67644301 - 22301074 116909637 MODEL JAAIVD010000002;XM_032913280 XP_032769171 UBA-like domain-containing protein 2 protein-coding 626114886 C12H8orf58 chromosome 12 C8orf58 homolog 12 54188555 54193472 + 116913622 MODEL JAAIVD010000007;XM_032917881;XM_032917883 XP_032773772;XP_032773774 uncharacterized protein C8orf58 homolog protein-coding 626114899 Tff2 trefoil factor 2 ENCODES a protein that exhibits CXCR4 chemokine receptor binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); chemokine-mediated signaling pathway (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); Helicobacter Infections (ortholog); Hookworm Infections (ortholog); FOUND IN extracellular space (ortholog) 18 2733677 2736590 + 30032202 116887217 MODEL JAAIVD010000013;XM_032888777 XP_032744668 protein-coding 626114907 Asic3 acid sensing ion channel subunit 3 ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); monoatomic cation channel activity (ortholog); monoatomic ion-gated channel activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception (ortholog); detection of chemical stimulus involved in sensory perception of pain (ortholog); detection of mechanical stimulus involved in sensory perception (ortholog); ASSOCIATED WITH Inflammation (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 6 153606240 153610595 + 22301074;30032202 116904208 MODEL JAAIVD010000024;XM_032907132;XM_032907133 XP_032763023;XP_032763024 acid-sensing ion channel 3 protein-coding 626114924 LOC116890444 small nucleolar RNA SNORA70 1 28767954 28768073 - 116890444 MODEL JAAIVD010000025 pseudo 626114925 Tmem97 transmembrane protein 97 ENCODES a protein that exhibits oxysterol binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); positive regulation of lipoprotein transport (ortholog); positive regulation of wound healing (ortholog); FOUND IN endoplasmic reticulum (ortholog); lysosome (ortholog); nuclear membrane (ortholog) 9 91890894 91900115 + 30032202 116909096 MODEL JAAIVD010000002;XM_032912567 XP_032768458 sigma intracellular receptor 2 protein-coding 626114932 LOC116887428 HLA class II histocompatibility antigen, DO alpha chain ENCODES a protein that exhibits MHC class II protein complex binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); negative regulation of antigen processing and presentation of peptide antigen via MHC class II (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); liver disease (ortholog); occupational asthma (ortholog); FOUND IN MHC class II protein complex (ortholog) 18 8226579 8229474 - 22301074;30032202 116887428 MODEL JAAIVD010000013;XM_032889044 XP_032744935 protein-coding 626114941 Tp53 tumor protein p53 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); chromatin binding (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic signaling pathway (ortholog); autophagy (ortholog); PARTICIPATES IN altered p53 signaling pathway; endometrial cancer pathway; non-small cell lung carcinoma pathway; ASSOCIATED WITH Acute Erythroleukemia (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); cytoplasm (ortholog) 9 49190388 49201759 + 22301074;30032202 116908890 MODEL JAAIVD010000002;XM_032912336;XM_032912337 XP_032768227;XP_032768228 cellular tumor antigen p53 protein-coding 626114957 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 846174 846245 - 116910821 MODEL JAAIVD010000002 trna 626114958 Chdh choline dehydrogenase ENCODES a protein that exhibits choline dehydrogenase activity (ortholog); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 13 5748226 5755276 + 22301074;30032202 116914701 MODEL JAAIVD010000008;XM_032919127 XP_032775018 choline dehydrogenase, mitochondrial protein-coding 626114969 Fbxl13 F-box and leucine rich repeat protein 13 6 150760336 150951037 - 22301074;30032202 116904173 MODEL JAAIVD010000024;XM_032907075;XM_032907076 XP_032762966;XP_032762967 dynein regulatory complex subunit 6 protein-coding 626114995 Nhlrc4 NHL repeat containing 4 9 3202137 3204067 - 22301074 116909148 MODEL JAAIVD010000002;XM_032912634 XP_032768525 NHL-repeat-containing protein 4 protein-coding 626115000 Kat6b lysine acetyltransferase 6B ENCODES a protein that exhibits histone acetyltransferase activity (ortholog); histone H3K14 acetyltransferase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder (ortholog); bipolar disorder (ortholog); blepharophimosis (ortholog); FOUND IN MOZ/MORF histone acetyltransferase complex (ortholog); nucleus (ortholog) 12 91279734 91448935 + 22301074;30032202 116913568 MODEL JAAIVD010000007;XM_032917780;XM_032917781;XM_032917782;XM_032917784;XM_032917785;XM_032917786;XM_032917787 XP_032773671;XP_032773672;XP_032773673;XP_032773675;XP_032773676;XP_032773677;XP_032773678 histone acetyltransferase KAT6B protein-coding 626115043 LOC116900110 interleukin-36 gamma-like 5 13009430 13015641 - 22301074;30032202 116900110 MODEL JAAIVD010000023;XM_032901887 XP_032757778 protein-coding 626115052 LOC116898587 uncharacterized LOC116898587 4 169024329 169141209 - 22301074 116898587 MODEL JAAIVD010000003;XM_032899784 XP_032755675 uncharacterized protein LOC116898587 protein-coding 626115067 LOC116898011 mediator of RNA polymerase II transcription subunit 31-like 4 71381360 71384464 - 116898011 MODEL JAAIVD010000003 pseudo 626115068 LOC116908895 RNA-binding protein MEX3A-like 1 159576668 159578233 - 116908895 MODEL JAAIVD010000025 pseudo 626115069 LOC116886478 protein-arginine deiminase type-4 1 17375579 17402583 + 22301074;30032202 116886478 MODEL JAAIVD010000025;XM_032887984 XP_032743875 protein-coding 626115089 Polq DNA polymerase theta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); chromatin binding (ortholog); DNA helicase activity (ortholog); INVOLVED IN base-excision repair (ortholog); DNA damage response (ortholog); DNA repair (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary breast ovarian cancer syndrome (ortholog); teratoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); mitochondrial nucleoid (ortholog) 4 21870521 21981074 + 22301074;30032202 116898831 MODEL JAAIVD010000003;XM_032900184 XP_032756075 protein-coding 626115123 LOC116890398 U6 spliceosomal RNA 1 143757262 143757366 + 116890398 MODEL JAAIVD010000025;XR_004386601 snrna 626115126 LOC116898107 glutathione S-transferase-like 4 98559137 98571545 + 22301074;30032202 116898107 MODEL JAAIVD010000003;XM_032899492 XP_032755383 protein-coding 626115136 Sec61g SEC61 translocon subunit gamma ENCODES a protein that exhibits phospholipid binding (ortholog); protein transmembrane transporter activity (ortholog); ribosome binding (ortholog); INVOLVED IN membrane docking (ortholog); protein targeting to ER (ortholog); FOUND IN membrane (ortholog); Sec61 translocon complex (ortholog) 11 84960174 84966641 - 22301074;30032202 116912716 MODEL JAAIVD010000006;XM_032916842 XP_032772733 protein transport protein Sec61 subunit gamma protein-coding 626115144 Rbm11 RNA binding motif protein 11 ENCODES a protein that exhibits poly(U) RNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 66404196 66412416 - 30032202 116898006 MODEL JAAIVD010000003;XM_032899402 XP_032755293 splicing regulator RBM11 protein-coding 626115153 LOC116887960 toll-like receptor 13 X 65716994 65721299 + 22301074;30032202 116887960 MODEL JAAIVD010000014;XM_032889406 XP_032745297 protein-coding 626115158 Isl2 ISL LIM homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of neuron differentiation (ortholog); neuron fate commitment (ortholog); retinal ganglion cell axon guidance (ortholog); FOUND IN nucleus (ortholog) 8 49610132 49614843 + 22301074;30032202 116907160 MODEL JAAIVD010000027;XM_032910118 XP_032766009 insulin gene enhancer protein ISL-2 protein-coding 626115168 LOC116904292 Ig kappa chain V-V region L6-like 6 42731266 42731794 - 116904292 MODEL JAAIVD010000024;XR_004388339 pseudo 626115172 LOC116889177 40S ribosomal protein S25-like X 96762020 96762684 - 116889177 MODEL JAAIVD010000014 pseudo 626115173 LOC116895094 small nucleolar RNA U13 2 208156923 208157023 + 116895094 MODEL JAAIVD010000001;XR_004387258 snorna 626115176 LOC116905539 uncharacterized LOC116905539 7 9630795 9633646 - 116905539 MODEL JAAIVD010000026;XR_004388548;XR_004388549 ncrna 626115184 Tmed5 transmembrane p24 trafficking protein 5 INVOLVED IN Golgi ribbon formation (ortholog); FOUND IN cis-Golgi network (ortholog); endoplasmic reticulum exit site (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 11 17922444 17941550 - 30032202 116912379 MODEL JAAIVD010000006;XM_032916437;XM_032916438 XP_032772328;XP_032772329 transmembrane emp24 domain-containing protein 5 protein-coding 626115197 Arhgap4 Rho GTPase activating protein 4 ENCODES a protein that exhibits GTPase activator activity (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of axon extension (ortholog); negative regulation of fibroblast migration (ortholog); nervous system development (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); growth cone (ortholog) X 128671717 128686737 + 22301074;30032202 116888661 MODEL JAAIVD010000014;XM_032889953 XP_032745844 rho GTPase-activating protein 4 protein-coding 626115223 LOC116906707 60S ribosomal protein L35-like 8 16999586 17000013 + 116906707 MODEL JAAIVD010000027;XR_004388764 pseudo 626115226 LOC116904669 small nucleolar RNA SNORA72 6 37687952 37688077 - 116904669 MODEL JAAIVD010000024;XR_004388369 snorna 626115229 Fastkd5 FAST kinase domains 5 ENCODES a protein that exhibits rRNA binding (ortholog); INVOLVED IN mitochondrial RNA processing (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) 5 110354154 110371358 - 22301074;30032202 116901971 MODEL JAAIVD010000023;XM_032904210 XP_032760101 FAST kinase domain-containing protein 5, mitochondrial protein-coding 626115236 Nbea neurobeachin ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN hematopoietic stem cell homeostasis (ortholog); intracellular protein localization (ortholog); regulation of neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Disease (ortholog); FOUND IN cerebellar Golgi cell to granule cell synapse (ortholog); cytosol (ortholog); endomembrane system (ortholog) 3 98300584 98832700 + 30032202 116896858 MODEL JAAIVD010000012;XM_032898366;XM_032898367;XM_032898369 XP_032754257;XP_032754258;XP_032754260 protein-coding 626115305 LOC116911872 U6 spliceosomal RNA 10 75084922 75085028 - 116911872 MODEL JAAIVD010000005;XR_004389386 snrna 626115308 Izumo2 IZUMO family member 2 2 154817960 154830418 - 116894347 MODEL JAAIVD010000001;XM_032896045;XM_032896047 XP_032751936;XP_032751938 izumo sperm-egg fusion protein 2 protein-coding 626115319 Smap1 small ArfGAP 1 ENCODES a protein that exhibits clathrin binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN positive regulation of erythrocyte differentiation (ortholog); regulation of clathrin-dependent endocytosis (ortholog); FOUND IN cytoplasm (ortholog) 4 101200800 101285302 - 22301074;30032202 116899252 MODEL JAAIVD010000003;XM_032900857;XM_032900859;XM_032900860 XP_032756748;XP_032756750;XP_032756751 stromal membrane-associated protein 1 protein-coding 626115342 LOC116898912 40S ribosomal protein S28-like 4 42330937 42331146 + 22301074;30032202 116898912 MODEL JAAIVD010000003;XM_032900321 XP_032756212 protein-coding 626115345 LOC116898524 protein transport protein Sec61 subunit gamma-like 4 139154902 139159948 + 116898524 MODEL JAAIVD010000003 pseudo 626115346 Suox sulfite oxidase ENCODES a protein that exhibits heme binding (ortholog); molybdopterin cofactor binding (ortholog); sulfite oxidase activity (ortholog); INVOLVED IN response to nutrient (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 1 156148770 156152608 - 22301074;30032202 116906301 MODEL JAAIVD010000025;XM_032909202 XP_032765093 sulfite oxidase, mitochondrial protein-coding 626115354 LOC116904385 probable global transcription activator SNF2L2 6 92294396 92301635 + 116904385 MODEL JAAIVD010000024 pseudo 626115355 Tssk3 testis specific serine kinase 3 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); FOUND IN sperm flagellum (ortholog) 1 28662701 28664119 + 22301074;30032202 116896152 MODEL JAAIVD010000025;XM_032897140 XP_032753031 testis-specific serine/threonine-protein kinase 3 protein-coding 626115361 Aadat aminoadipate aminotransferase ENCODES a protein that exhibits 2-aminoadipate transaminase activity (ortholog); glycine:2-oxoglutarate aminotransferase activity (ortholog); kynurenine-glyoxylate transaminase activity (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); glutamate metabolic process (ortholog); kynurenine metabolic process (ortholog); PARTICIPATES IN 2-aminoadipic 2-oxoadipic aciduria pathway; glutaric aciduria type I pathway; hyperlysinemia pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 13 28407119 28436303 - 22301074;30032202 116914452 MODEL JAAIVD010000008;XM_032918754 XP_032774645 kynurenine/alpha-aminoadipate aminotransferase, mitochondrial protein-coding 626115378 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48634023 48634094 + 116910802 MODEL JAAIVD010000002 trna 626115379 Klb klotho beta ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH amenorrhea (ortholog); Martsolf syndrome 1 (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog) 11 22366923 22405935 + 22301074;30032202 116912729 MODEL JAAIVD010000006;XM_032916864 XP_032772755 beta-klotho protein-coding 626115388 Ccne1 cyclin E1 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase regulator activity (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); antral ovarian follicle growth (ortholog); cellular response to nutrient (ortholog); PARTICIPATES IN G1/S transition pathway; mTOR signaling pathway; ASSOCIATED WITH Bowen's Disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN centrosome (ortholog); cyclin E1-CDK2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 2 160541489 160550763 + 30032202;8336937 116892255 MODEL D14015;JAAIVD010000001;XM_032893837;XM_032893838 BAA03116;XP_032749728;XP_032749729 G1/S-specific cyclin-E1 protein-coding 626115406 Dennd2a DENN domain containing 2A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN retrograde transport, endosome to Golgi (ortholog); FOUND IN actin cytoskeleton (ortholog) 6 100280750 100337196 + 30032202 116903929 MODEL JAAIVD010000024;XM_032906700 XP_032762591 DENN domain-containing protein 2A protein-coding 626115428 LOC116885837 uncharacterized LOC116885837 16 56491 61689 + 22301074 116885837 MODEL JAAIVD010000004;XM_032887176 XP_032743067 uncharacterized protein LOC116885837 protein-coding 626115433 LOC116885048 small nucleolar RNA SNORA17 15 10253611 10253745 - 116885048 MODEL JAAIVD010000010;XR_004385934 snorna 626115436 Nxpe2 neurexophilin and PC-esterase domain family member 2 8 42821120 42845572 - 116906963 MODEL JAAIVD010000027;XM_032909884 XP_032765775 NXPE family member 2 protein-coding 626115445 LOC116901464 uncharacterized LOC116901464 5 43478276 43482840 + 116901464 MODEL JAAIVD010000023;XR_004387997 ncrna 626115450 LOC116895525 late cornified envelope protein 1C-like 3 120215106 120216431 - 22301074 116895525 MODEL JAAIVD010000012;XM_032896770 XP_032752661 protein-coding 626115456 Ankrd60 ankyrin repeat domain 60 5 144398349 144407803 + 22301074 116902274 MODEL JAAIVD010000023;XM_032904707 XP_032760598 ankyrin repeat domain-containing protein 60 protein-coding 626115463 LOC116887266 olfactory receptor 14J1-like 18 10584344 10585281 - 22301074;30032202 116887266 MODEL JAAIVD010000013;XM_032888833 XP_032744724 protein-coding 626115466 LOC116911969 histone-binding protein RBBP4-like 11 31820218 31821368 + 116911969 MODEL JAAIVD010000006 pseudo 626115467 Pitx1 paired like homeodomain 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN branchiomeric skeletal muscle development (ortholog); cartilage development (ortholog); embryonic hindlimb morphogenesis (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Carpal Synostosis with Dysplastic Elbow Joints and Brachydactyly (ortholog); clubfoot (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 14 74145594 74151825 - 22301074;30032202 116883478 MODEL JAAIVD010000009;XM_032884633 XP_032740524 pituitary homeobox 1 protein-coding 626115474 LOC116894537 ADP-ribosylation factor-like protein 2-binding protein 2 176471089 176471900 + 30032202 116894537 MODEL JAAIVD010000001;XM_032896240 XP_032752131 protein-coding 626115480 LOC116884937 prothymosin alpha-like 15 43595329 43595637 + 30032202 116884937 MODEL JAAIVD010000010;XM_032886149 XP_032742040 protein-coding 626115483 LOC116907293 zinc finger protein OZF-like 8 18496784 18507528 - 30032202 116907293 MODEL JAAIVD010000027;XM_032910243 XP_032766134 protein-coding 626115491 Sypl1 synaptophysin like 1 ASSOCIATED WITH intellectual disability (ortholog); FOUND IN membrane (ortholog); secretory granule (ortholog); synaptic vesicle membrane (ortholog) 7 46302182 46322297 + 22301074;30032202 116904964 MODEL JAAIVD010000026;XM_032907625;XR_004388477 XP_032763516 synaptophysin-like protein 1 protein-coding 626115503 LOC116898109 KH homology domain-containing protein 1B-like 4 98733432 98734686 + 22301074;30032202 116898109 MODEL JAAIVD010000003;XM_032899494 XP_032755385 protein-coding 626115509 Myl2 myosin light chain 2 ENCODES a protein that exhibits actin monomer binding (ortholog); calcium ion binding (ortholog); structural constituent of muscle (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cardiac myofibril assembly (ortholog); cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN E-cadherin signaling pathway; N-cadherin signaling pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); cardiomyopathy (ortholog); congenital heart disease (ortholog); FOUND IN actin cytoskeleton (ortholog); cardiac myofibril (ortholog); contractile muscle fiber (ortholog) 16 31727874 31734588 - 22301074;30032202;3380697 116885325 MODEL JAAIVD010000004;X07314;XM_032886589;XM_032886590 CAA30277;XP_032742480;XP_032742481 myosin regulatory light chain 2, ventricular/cardiac muscle isoform protein-coding 626115525 Capg capping actin protein, gelsolin like ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell projection assembly (ortholog); cellular response to type II interferon (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN centriole (ortholog); chromosome (ortholog); cytoplasm (ortholog) 5 144532886 144533848 + 22301074;30032202 116900748 MODEL JAAIVD010000023;XM_032902454 XP_032758345 macrophage-capping protein protein-coding 626115529 LOC116913014 small nucleolar RNA U13 11 4936495 4936599 + 116913014 MODEL JAAIVD010000006;XR_004389567 snorna 626115532 LOC116904212 ATP-binding cassette sub-family F member 2-like 6 153764370 153775954 - 22301074;30032202 116904212 MODEL JAAIVD010000024;XM_032907143 XP_032763034 protein-coding 626115548 LOC116885080 U1 spliceosomal RNA 15 63797430 63797594 + 116885080 MODEL JAAIVD010000010;XR_004385953 snrna 626115551 C5H9orf78 chromosome 5 C9orf78 homolog ENCODES a protein that exhibits U5 snRNA binding (ortholog); INVOLVED IN mRNA cis splicing, via spliceosome (ortholog); regulation of homologous chromosome segregation (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 4635436 4643292 + 30032202 116901171 MODEL JAAIVD010000023;XM_032902830 XP_032758721 telomere length and silencing protein 1 homolog protein-coding 626115564 C1H12orf75 chromosome 1 C12orf75 homolog 1 164732617 164739640 - 116911338 MODEL JAAIVD010000025;XM_032915294 XP_032771185 overexpressed in colon carcinoma 1 protein protein-coding 626115572 LOC116902863 olfactory receptor 2F1-like 6 97729301 97730239 + 22301074 116902863 MODEL JAAIVD010000024;XM_032905192 XP_032761083 protein-coding 626115575 LOC116912997 small nucleolar RNA SNORA17 11 21180027 21180158 + 116912997 MODEL JAAIVD010000006;XR_004389560 snorna 626115578 Dhx8 DEAH-box helicase 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 61022162 61057589 + 22301074;30032202 116908906 MODEL JAAIVD010000002;XM_032912360 XP_032768251 ATP-dependent RNA helicase DHX8 protein-coding 626115604 LOC116915125 cytosol aminopeptidase-like 1 195705865 195720350 + 22301074;30032202 116915125 MODEL JAAIVD010000025;XM_032919568 XP_032775459 protein-coding 626115610 LOC116906179 uncharacterized LOC116906179 1 155959361 155971926 + 116906179 MODEL JAAIVD010000025;XR_004388585 ncrna 626115614 LOC116913509 armadillo-like helical domain-containing protein 4 12 73284211 73385850 + 116913509 MODEL JAAIVD010000007;XM_032917713 XP_032773604 protein-coding 626115626 Fbln2 fibulin 2 ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Weight Gain (ortholog) 6 55668212 55726710 - 22301074 116903503 MODEL JAAIVD010000024;XM_032906100 XP_032761991 fibulin-2 protein-coding 626115648 LOC116906322 U6 spliceosomal RNA 7 95701859 95701966 - 116906322 MODEL JAAIVD010000026;XR_004388609 snrna 626115651 Nrg2 neuregulin 2 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); ErbB-3 class receptor binding (ortholog); INVOLVED IN cell surface receptor signaling pathway (ortholog); epidermal growth factor receptor signaling pathway (ortholog); ERBB2-ERBB3 signaling pathway (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular space (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 15 8179149 8359947 + 30032202 116884966 MODEL JAAIVD010000010;XM_032886174 XP_032742065 pro-neuregulin-2, membrane-bound isoform protein-coding 626115666 LOC116912046 testis-expressed protein 30-like 11 85112102 85112864 + 116912046 MODEL JAAIVD010000006 pseudo 626115667 Flt3lg fms related receptor tyrosine kinase 3 ligand ENCODES a protein that exhibits identical protein binding (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN B cell differentiation (ortholog); dendritic cell differentiation (ortholog); embryonic hemopoiesis (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); colon carcinoma (ortholog); Fanconi anemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 2 154407305 154414305 + 22301074;30032202 116892166 MODEL JAAIVD010000001;XM_032893664;XM_032893665;XM_032893666;XM_032893667;XM_032893668;XM_032893669;XM_032893670;XM_032893671;XR_004386921;XR_004386922;XR_004386923;XR_004386924 XP_032749555;XP_032749556;XP_032749557;XP_032749558;XP_032749559;XP_032749560;XP_032749561;XP_032749562 fms-related tyrosine kinase 3 ligand protein-coding 626115705 Rnf14 ring finger protein 14 ENCODES a protein that exhibits nuclear androgen receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-like protein transferase activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); protein K6-linked ubiquitination (ortholog); protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 15 6608445 6632260 - 22301074;30032202 116884991 MODEL JAAIVD010000010;XM_032886211;XM_032886213;XM_032886214;XM_032886215;XM_032886216;XM_032886217 XP_032742102;XP_032742104;XP_032742105;XP_032742106;XP_032742107;XP_032742108 E3 ubiquitin-protein ligase RNF14 protein-coding 626115734 Trnar-acg transfer RNA arginine (anticodon ACG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 134420972 134421044 + 116897675 MODEL JAAIVD010000012 trna 626115735 St14 ST14 transmembrane serine protease matriptase ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN epithelial cell morphogenesis involved in placental branching (ortholog); keratinocyte differentiation (ortholog); neural tube closure (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 11 (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN basolateral plasma membrane (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 8 26824839 26864091 - 22301074;30032202 116906905 MODEL JAAIVD010000027;XM_032909822 XP_032765713 suppression of tumorigenicity 14;suppressor of tumorigenicity 14 protein protein-coding 626115758 LOC116904731 small nucleolar RNA SNORA17 6 23599474 23599604 + 116904731 MODEL JAAIVD010000024;XR_004388421 snorna 626115761 Prrt1 proline rich transmembrane protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); signaling receptor regulator activity (ortholog); INVOLVED IN intracellular protein localization (ortholog); learning or memory (ortholog); long-term synaptic depression (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog); postsynaptic membrane (ortholog) 18 7310116 7313780 + 22301074;30032202 116886833 MODEL JAAIVD010000013;XM_032888279;XM_032888280;XM_032888281 XP_032744170;XP_032744171;XP_032744172 proline-rich transmembrane protein 1 protein-coding 626115776 Spns2 SPNS lysolipid transporter 2, sphingosine-1-phosphate ENCODES a protein that exhibits sphingolipid transporter activity (ortholog); INVOLVED IN B cell homeostasis (ortholog); bone development (ortholog); lipid transport (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 115 (ortholog); Hearing Loss (ortholog); sensorineural hearing loss (ortholog) 9 43030509 43068779 + 22301074;30032202 116908516 MODEL JAAIVD010000002;XM_032911688;XM_032911689;XM_032911690;XR_004388990 XP_032767579;XP_032767580;XP_032767581 protein spinster homolog 2;sphingolipid transporter 2 protein-coding 626115802 KEG97_t07 tRNA-Trp MT 4938 5003 + 64988250 trna 626115803 LOC116899035 calreticulin-like 1 45597019 45612343 - 22301074;30032202 116899035 MODEL JAAIVD010000025;XM_032900498 XP_032756389 protein-coding 626115814 Gm2a GM2 ganglioside activator ENCODES a protein that exhibits beta-N-acetylgalactosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); enzyme activator activity (ortholog); INVOLVED IN ganglioside catabolic process (ortholog); ganglioside metabolic process (ortholog); learning or memory (ortholog); ASSOCIATED WITH genetic disease (ortholog); GM2 gangliosidosis (ortholog); GM2 gangliosidosis, AB variant (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 37524856 37537624 + 30032202 116909541 MODEL JAAIVD010000002;XM_032913157 XP_032769048 ganglioside GM2 activator protein-coding 626115822 Zbtb42 zinc finger and BTB domain containing 42 INVOLVED IN muscle organ development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Lethal Congenital Contracture Syndrome 6 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 130271844 130275781 + 22301074;30032202 116905517 MODEL JAAIVD010000026;XM_032908540 XP_032764431 zinc finger and BTB domain-containing protein 42 protein-coding 626115828 Tubb4b tubulin beta 4B class IVb ENCODES a protein that exhibits double-stranded RNA binding (ortholog); INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Leber congenital amaurosis with early-onset deafness (ortholog); FOUND IN axonemal microtubule (ortholog); intercellular bridge (ortholog); microtubule (ortholog) 5 11957339 11959817 + 22301074;30032202 116901317 MODEL JAAIVD010000023;XM_032903129 XP_032759020 tubulin beta-4B chain protein-coding 626115836 LOC116894089 olfactory receptor 52K1-like 2 103258771 103259715 - 22301074 116894089 MODEL JAAIVD010000001;XM_032895810 XP_032751701 protein-coding 626115839 LOC116884815 uncharacterized LOC116884815 15 43491098 43494441 + 116884815 MODEL JAAIVD010000010;XR_004385898 ncrna 626115844 Psd pleckstrin and Sec7 domain containing ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN maintenance of postsynaptic density structure (ortholog); neuron differentiation (ortholog); neuron projection development (ortholog); FOUND IN cleavage furrow (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 2 45773690 45788313 - 22301074 116891241 MODEL JAAIVD010000001;XM_032892108;XM_032892109 XP_032747999;XP_032748000 PH and SEC7 domain-containing protein 1 protein-coding 626115870 LOC116885804 60S acidic ribosomal protein P2-like 16 37999864 38000214 - 116885804 MODEL JAAIVD010000004 pseudo 626115871 Ids iduronate 2-sulfatase ENCODES a protein that exhibits calcium ion binding (ortholog); iduronate-2-sulfatase activity (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN dermatan sulfate proteoglycan catabolic process (ortholog); glycosaminoglycan catabolic process (ortholog); heparan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 5D with Nail Dystrophy (ortholog); genetic disease (ortholog); Lung Neoplasms (ortholog); FOUND IN lysosomal lumen (ortholog); lysosome (ortholog) 8 34658727 34679016 + 22301074;30032202 116906586 MODEL JAAIVD010000027;XM_032909324 XP_032765215 protein-coding 626115884 LOC116901871 40S ribosomal protein S4, X isoform-like 5 99842943 99843664 + 116901871 MODEL JAAIVD010000023 pseudo 626115885 LOC116900019 vomeronasal secretory protein 1-like 5 11345081 11346906 - 30032202 116900019 MODEL JAAIVD010000023;XM_032901817 XP_032757708 protein-coding 626115892 LOC116909489 60S ribosomal protein L35-like 9 1219547 1219923 + 116909489 MODEL JAAIVD010000002 pseudo 626115893 Pitx2 paired like homeodomain 2 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); animal organ morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); anterior segment dysgenesis 1 (ortholog); anterior segment dysgenesis 4 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 30098939 30118584 - 22301074;30032202 116896269 MODEL JAAIVD010000012;XM_032897346;XM_032897347 XP_032753237;XP_032753238 pituitary homeobox 2 protein-coding 626115904 LOC116913566 60S ribosomal protein L14-like 12 44223269 44234816 - 116913566 MODEL JAAIVD010000007 pseudo 626115905 LOC116910392 ubiquitin-associated protein 2-like 9 92949789 92955086 + 116910392 MODEL JAAIVD010000002 pseudo 626115906 Map4k4 mitogen-activated protein kinase kinase kinase kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); creatine kinase activity (ortholog); MAP kinase kinase kinase kinase activity (ortholog); INVOLVED IN hippo signaling (ortholog); intracellular signal transduction (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN ceramide signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH arteriovenous malformations of the brain (ortholog); colorectal cancer (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog) 4 116159452 116284969 + 22301074 116899323 MODEL JAAIVD010000003;XM_032900989;XM_032900990;XM_032900992;XM_032900993;XM_032900994;XM_032900995;XM_032900996;XM_032900997;XM_032900998;XM_032900999;XM_032901000;XM_032901001;XM_032901003;XM_032901004;XM_032901005;XM_032901006;XM_032901007;XM_032901008;XM_032901009;XM_032901010 XP_032756880;XP_032756881;XP_032756883;XP_032756884;XP_032756885;XP_032756886;XP_032756887;XP_032756888;XP_032756889;XP_032756890;XP_032756891;XP_032756892;XP_032756894;XP_032756895;XP_032756896;XP_032756897;XP_032756898;XP_032756899;XP_032756900;XP_032756901 protein-coding 626115965 LOC116898622 histone-lysine N-methyltransferase SETD1B 4 2388243 2403870 - 116898622 MODEL JAAIVD010000003;XM_032899834;XM_032899835;XM_032899836 XP_032755725;XP_032755726;XP_032755727 protein-coding 626115981 Klhdc4 kelch domain containing 4 17 41449696 41482775 - 22301074 116886270 MODEL JAAIVD010000011;XM_032887694 XP_032743585 kelch domain-containing protein 4 protein-coding 626115997 LOC116899778 U6 spliceosomal RNA 4 164907917 164907995 - 116899778 MODEL JAAIVD010000003 pseudo 626115998 LOC116895587 general transcription factor 3C polypeptide 6-like 3 144640612 144642173 + 30032202 116895587 MODEL JAAIVD010000012;XM_032896814 XP_032752705 protein-coding 626116003 LOC116912538 uncharacterized LOC116912538 11 16233590 16238814 - 22301074 116912538 MODEL JAAIVD010000006;XM_032916639 XP_032772530 uncharacterized protein LOC116912538 protein-coding 626116007 Olr1 oxidized low density lipoprotein receptor 1 ENCODES a protein that exhibits identical protein binding (ortholog); low-density lipoprotein particle receptor activity (ortholog); INVOLVED IN leukocyte cell-cell adhesion (ortholog); lipoprotein metabolic process (ortholog); negative regulation of miRNA transcription (ortholog); PARTICIPATES IN angiotensin II signaling pathway; ASSOCIATED WITH cardiomyopathy (ortholog); cerebral amyloid angiopathy (ortholog); congestive heart failure (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 6 18098060 18120488 + 30032202 116904561 MODEL JAAIVD010000024;XM_032907357 XP_032763248 oxidized low-density lipoprotein receptor 1 protein-coding 626116019 LOC116889623 protein kish-A-like Y 1253044 1253277 + 30032202 116889623 MODEL JAAIVD010000015;XM_032890543 XP_032746434 protein-coding 626116022 LOC116889001 uncharacterized LOC116889001 X 17879704 17894090 + 116889001 MODEL JAAIVD010000014;XR_004386360 ncrna 626116027 LOC116893245 inositol polyphosphate multikinase-like 2 126700319 126713208 - 116893245 MODEL JAAIVD010000001 pseudo 626116028 N4bp2 NEDD4 binding protein 2 ENCODES a protein that exhibits ATP binding (ortholog); ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity (ortholog); DNA endonuclease activity (ortholog); FOUND IN cytosol (ortholog) 11 22848745 22897032 + 22301074 116911930 MODEL JAAIVD010000006;XM_032915821 XP_032771712 NEDD4-binding protein 2 protein-coding 626116048 LOC116887393 28S ribosomal protein S36, mitochondrial-like 18 23479191 23479625 + 116887393 MODEL JAAIVD010000013 pseudo 626116049 Fbxo2 F-box protein 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); carbohydrate binding (ortholog); denatured protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); glycoprotein catabolic process (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 1 12613658 12619413 - 22301074;30032202 116892826 MODEL JAAIVD010000025;XM_032894712 XP_032750603 F-box only protein 2 protein-coding 626116059 LOC116894907 U1 spliceosomal RNA 2 198905226 198905386 + 116894907 MODEL JAAIVD010000001;XR_004387109 snrna 626116062 LOC116909077 60S ribosomal protein L6-like 9 89391012 89392473 - 116909077 MODEL JAAIVD010000002 pseudo 626116063 Paics phosphoribosylaminoimidazole carboxylase and phosphoribosylaminoimidazolesuccinocarboxamide synthase ENCODES a protein that exhibits identical protein binding (ortholog); phosphoribosylaminoimidazole carboxylase activity (ortholog); phosphoribosylaminoimidazolesuccinocarboxamide synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH PHOSPHORIBOSYLAMINOIMIDAZOLE CARBOXYLASE DEFICIENCY (ortholog); schizophrenia (ortholog); FOUND IN cytoplasm (ortholog) 11 33698623 33714474 + 22301074 116912522 MODEL JAAIVD010000006;XM_032916613;XM_032916614 XP_032772504;XP_032772505 multifunctional protein ADE2 protein-coding 626116080 Ubl4a ubiquitin like 4A ENCODES a protein that exhibits protein-folding chaperone binding (ortholog); INVOLVED IN post-translational protein targeting to endoplasmic reticulum membrane (ortholog); regulation of protein stability (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN BAT3 complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) X 128371354 128374225 - 22301074;30032202 116888553 MODEL JAAIVD010000014;XM_032889860 XP_032745751 ubiquitin-like protein 4A protein-coding 626116088 LOC116886773 U1 spliceosomal RNA 17 33212250 33212414 - 116886773 MODEL JAAIVD010000011;XR_004386170 snrna 626116091 Smc1b structural maintenance of chromosomes 1B ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN meiotic cell cycle (ortholog); sister chromatid cohesion (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); myoepithelioma (ortholog); primary ovarian insufficiency 16 (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog); cytosol (ortholog) 1 254439876 254502387 - 22301074;30032202 116890166 MODEL JAAIVD010000025;XM_032890901 XP_032746792 structural maintenance of chromosomes protein 1B protein-coding 626116120 Noc3l NOC3 like DNA replication regulator INVOLVED IN fat cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); nuclear speck (ortholog); nucleolus (ortholog) 2 34966177 34994797 + 30032202 116891118 MODEL JAAIVD010000001;XM_032891833 XP_032747724 nucleolar complex protein 3 homolog protein-coding 626116145 Zscan26 zinc finger and SCAN domain containing 26 FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 14 40997799 41019539 + 30032202 116883341 MODEL JAAIVD010000009;XM_032884414;XM_032884415;XM_032884416;XM_032884417;XM_032884418 XP_032740305;XP_032740306;XP_032740307;XP_032740308;XP_032740309 zinc finger and SCAN domain-containing protein 26 protein-coding 626116163 LOC116893079 ribosomal biogenesis factor-like 2 44707589 44708667 + 116893079 MODEL JAAIVD010000001 pseudo 626116164 LOC116911975 ferritin light chain 1-like 11 37719113 37794424 + 116911975 MODEL JAAIVD010000006 pseudo 626116165 Rbm18 RNA binding motif protein 18 FOUND IN cytosol (ortholog); intercellular bridge (ortholog); nucleoplasm (ortholog) 5 13343876 13364065 + 22301074;30032202 116901341 MODEL JAAIVD010000023;XM_032903172 XP_032759063 probable RNA-binding protein 18 protein-coding 626116175 LOC116914151 small nucleolar RNA SNORA17 12 29416674 29416796 - 116914151 MODEL JAAIVD010000007 pseudo 626116176 Cdc40 cell division cycle 40 INVOLVED IN embryonic brain development (ortholog); mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH pontocerebellar hypoplasia (ortholog); pontocerebellar hypoplasia type 15 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 18 40578110 40630406 - 22301074;30032202 116887546 MODEL JAAIVD010000013;XM_032889177 XP_032745068 pre-mRNA-processing factor 17 protein-coding 626116195 LOC116899816 small Cajal body-specific RNA 8 4 20584375 20584505 + 116899816 MODEL JAAIVD010000003;XR_004387816 ncrna 626116198 LOC116901087 zinc finger protein 33B-like 5 152603445 152610925 + 30032202 116901087 MODEL JAAIVD010000023;XM_032902650 XP_032758541 protein-coding 626116206 LOC116886054 phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like 1 5345717 5346065 - 116886054 MODEL JAAIVD010000025 pseudo 626116207 LOC116897963 ornithine decarboxylase antizyme 1-like 4 46823143 46823960 + 116897963 MODEL JAAIVD010000003 pseudo 626116208 LOC116888579 glutathione S-transferase P-like X 88613067 88613819 + 22301074;30032202 116888579 MODEL JAAIVD010000014;XM_032889880 XP_032745771 protein-coding 626116213 LOC116893728 olfactory receptor 9I1-like 2 13813917 13814864 - 22301074;30032202 116893728 MODEL JAAIVD010000001;XM_032895443 XP_032751334 protein-coding 626116216 Trib3 tribbles pseudokinase 3 ENCODES a protein that exhibits enzyme binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress (ortholog); negative regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Experimental Liver Cirrhosis (ortholog); Insulin Resistance (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 131660999 131666995 - 22301074;30032202 116902119 MODEL JAAIVD010000023;XM_032904434 XP_032760325 tribbles homolog 3 protein-coding 626116224 LOC116887402 40S ribosomal protein S12-like 1 40642349 40642663 + 22301074;30032202 116887402 MODEL JAAIVD010000025;XM_032888999 XP_032744890 protein-coding 626116228 Syt1 synaptotagmin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sensor activity (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN calcium activated phospholipid scrambling (ortholog); calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Baker-Gordon Syndrome (ortholog); Experimental Seizures (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dense core granule (ortholog) 1 186712361 187053245 - 15238157;2333096;30032202 116908811 MODEL AJ617615;JAAIVD010000025;X52772;XM_032912219;XM_032912229 CAA36981;CAE85101;XP_032768110;XP_032768120 p65 cellular protein;synaptotagmin-1 protein-coding 626116243 LOC116884401 thioredoxin-like protein 4A 15 64873761 64876849 - 116884401 MODEL JAAIVD010000010 pseudo 626116244 Impa2 inositol monophosphatase 2 ENCODES a protein that exhibits inositol monophosphate 1-phosphatase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to lithium ion (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); endometriosis (ortholog); Febrile Seizures (ortholog); FOUND IN cytoplasm (ortholog) 15 63976414 64007614 - 22301074;30032202 116884711 MODEL JAAIVD010000010;XM_032885896;XM_032885897 XP_032741787;XP_032741788 protein-coding 626116260 LOC116894611 vomeronasal type-2 receptor 116-like 2 185008500 185023786 + 116894611 MODEL JAAIVD010000001 pseudo 626116261 LOC116893648 membrane-spanning 4-domains subfamily A member 4D-like 2 10909267 10920659 + 22301074;30032202 116893648 MODEL JAAIVD010000001;XM_032895365 XP_032751256 protein-coding 626116269 Pigw phosphatidylinositol glycan anchor biosynthesis class W ENCODES a protein that exhibits glucosaminyl-phosphatidylinositol O-acyltransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH hyperphosphatasia with impaired intellectual development syndrome (ortholog); hyperphosphatasia with impaired intellectual development syndrome 5 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 9 85823149 85826889 + 22301074;30032202 116909190 MODEL JAAIVD010000002;XM_032912687;XM_032912688 XP_032768578;XP_032768579 phosphatidylinositol-glycan biosynthesis class W protein protein-coding 626116278 LOC116914082 barrier-to-autointegration factor-like 1 183368009 183372793 + 116914082 MODEL JAAIVD010000025 pseudo 626116279 LOC116894528 vomeronasal type-2 receptor 116-like 2 175616926 175634728 + 22301074;30032202 116894528 MODEL JAAIVD010000001;XM_032896230;XM_032896231;XM_032896232 XP_032752121;XP_032752122;XP_032752123 protein-coding 626116292 Erich1 glutamate rich 1 13 69685477 69749071 + 116914619 MODEL JAAIVD010000008;XM_032918980 XP_032774871 glutamate-rich protein 1 protein-coding 626116302 LOC116885027 small nucleolar RNA SNORA22 15 57573721 57573847 - 116885027 MODEL JAAIVD010000010;XR_004385915 snorna 626116305 LOC116888260 FERM domain-containing protein 3-like 1 79566368 79581849 + 116888260 MODEL JAAIVD010000025;XM_032889543;XM_032889547 XP_032745434;XP_032745438 protein-coding 626116312 Tmem80 transmembrane protein 80 ASSOCIATED WITH Beckwith-Wiedemann syndrome (ortholog); FOUND IN ciliary transition zone (ortholog) 2 8140781 8149806 - 30032202 116890876 MODEL JAAIVD010000001;XM_032891460;XM_032891461 XP_032747351;XP_032747352 protein-coding 626116322 Tns3 tensin 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor adaptor activity (ortholog); INVOLVED IN bone resorption (ortholog); endothelial cell migration (ortholog); lung alveolus development (ortholog); FOUND IN cytosol (ortholog); focal adhesion (ortholog); podosome (ortholog) 11 77543250 77673969 - 22301074 116912154 MODEL JAAIVD010000006;XM_032916073;XM_032916074;XM_032916075 XP_032771964;XP_032771965;XP_032771966 tensin-3 protein-coding 626116361 LOC116889533 small Cajal body-specific RNA 3 X 55075652 55075787 - 116889533 MODEL JAAIVD010000014;XR_004386468 ncrna 626116364 Actb actin beta ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); identical protein binding (ortholog); kinesin binding (ortholog); INVOLVED IN adherens junction assembly (ortholog); apical protein localization (ortholog); axonogenesis (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; INO80 family mediated chromatin remodeling pathway; mitochondria transport pathway; ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); Animal Mammary Neoplasms (ortholog); Baraitser-Winter syndrome (ortholog); FOUND IN actin cytoskeleton (ortholog); adherens junction (ortholog); apical junction complex (ortholog) 16 10237093 10240618 + 116885749 MODEL JAAIVD010000004;XM_032887061 XP_032742952 actin, cytoplasmic 1 protein-coding 626116373 Actl6a actin like 6A ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chromatin remodeling (ortholog); nervous system development (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; INO80 family mediated chromatin remodeling pathway; pancreatic cancer pathway; ASSOCIATED WITH atrial heart septal defect (ortholog); cervical dystonia (ortholog); Developmental Disabilities (ortholog); FOUND IN Ino80 complex (ortholog); npBAF complex (ortholog); NuA4 histone acetyltransferase complex (ortholog) 3 122275169 122292561 - 30032202 116896960 MODEL JAAIVD010000012;XM_032898537;XM_032898538 XP_032754428;XP_032754429 actin-like protein 6A protein-coding 626116394 LOC116907303 olfactory receptor 150-like 8 82258620 82259558 + 22301074;30032202 116907303 MODEL JAAIVD010000027;XM_032910250 XP_032766141 protein-coding 626116398 Cldn5 claudin 5 INVOLVED IN cell-cell junction assembly (ortholog); establishment of blood-retinal barrier (ortholog); establishment of endothelial barrier (ortholog); ASSOCIATED WITH genetic disease (ortholog); Intestinal Reperfusion Injury (ortholog); malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog); cell-cell junction (ortholog) 4 4044965 4047127 + 22301074;30032202 116898676 MODEL JAAIVD010000003;XM_032899926 XP_032755817 claudin-5 protein-coding 626116403 Amigo2 adhesion molecule with Ig like domain 2 INVOLVED IN cerebellum development (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); gastric adenocarcinoma (ortholog); melanoma (ortholog) 1 270077227 270080125 - 22301074;30032202 116884506 MODEL JAAIVD010000025;XM_032885639 XP_032741530 amphoterin-induced protein 2 protein-coding 626116409 Dhrs2 dehydrogenase/reductase 2 ENCODES a protein that exhibits carbonyl reductase (NADPH) activity (ortholog); oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); electron transport chain (ortholog); myeloid dendritic cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nuclear envelope (ortholog) 12 69766310 69772336 - 30032202 116913655 MODEL JAAIVD010000007;XM_032917926 XP_032773817 dehydrogenase/reductase SDR family member 2, mitochondrial protein-coding 626116420 Cpeb1 cytoplasmic polyadenylation element binding protein 1 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to insulin stimulus (ortholog); ASSOCIATED WITH amenorrhea (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); glioblastoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 118806882 118910646 + 30032202 116891904 MODEL JAAIVD010000001;XM_032893321;XM_032893323;XM_032893324;XM_032893325;XM_032893326 XP_032749212;XP_032749214;XP_032749215;XP_032749216;XP_032749217 cytoplasmic polyadenylation element-binding protein 1 protein-coding 626116444 LOC116904465 zinc finger CCCH-type antiviral protein 1-like 6 135345138 135346361 - 116904465 MODEL JAAIVD010000024 pseudo 626116445 LOC116889849 olfactory receptor 5B12-like 1 151585528 151586472 + 22301074;30032202 116889849 MODEL JAAIVD010000025;XM_032890680 XP_032746571 protein-coding 626116448 Lipt2 lipoyl(octanoyl) transferase 2 ENCODES a protein that exhibits lipoyl(octanoyl) transferase activity (ortholog); INVOLVED IN positive regulation of oxygen metabolic process (ortholog); protein lipoylation (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); ENCEPHALOPATHY, PROGRESSIVE, EARLY-ONSET, WITH BRAIN ATROPHY AND SPASTICITY (ortholog); Neonatal Severe Encephalopathy with Lactic Acidosis and Brain Abnormalities (ortholog); FOUND IN mitochondrion (ortholog) 2 98454984 98456502 + 22301074;30032202 116891734 MODEL JAAIVD010000001;XM_032893034 XP_032748925 putative lipoyltransferase 2, mitochondrial protein-coding 626116454 LOC116910577 uncharacterized LOC116910577 9 34454056 34454760 + 116910577 MODEL JAAIVD010000002;XR_004389158 ncrna 626116458 Nova2 uncharacterized LOC116892560 ENCODES a protein that exhibits mRNA binding (ortholog); RNA binding (ortholog); sequence-specific mRNA binding (ortholog); INVOLVED IN central nervous system neuron development (ortholog); negative regulation of cold-induced thermogenesis (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorder with or without Autistic Features and/or Structural Brain Abnormalities (ortholog) 2 171663867 171697189 - 30032202 116892560 MODEL JAAIVD010000001;XM_032894338 XP_032750229 RNA-binding protein Nova-2 protein-coding 626116466 Ctnnb1 catenin beta 1 ENCODES a protein that exhibits alpha-catenin binding (ortholog); cadherin binding (ortholog); chromatin binding (ortholog); INVOLVED IN acinar cell differentiation (ortholog); adherens junction assembly (ortholog); adherens junction organization (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; colorectal cancer pathway; E-cadherin signaling pathway; ASSOCIATED WITH Aberrant Crypt Foci (ortholog); adenocarcinoma (ortholog); adenoma (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); apical part of cell (ortholog) 8 112140234 112166955 + 22301074;30032202 116907963 MODEL JAAIVD010000027;XM_032911190;XM_032911191 XP_032767081;XP_032767082 catenin beta-1 protein-coding 626116490 LOC116894129 olfactory receptor 52E8-like 2 103927497 103928368 - 22301074 116894129 MODEL JAAIVD010000001;XM_032895848 XP_032751739 protein-coding 626116493 LOC116899300 cytochrome c oxidase assembly factor 5 INVOLVED IN leukocyte differentiation (ortholog); multicellular organism growth (ortholog); spleen development (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 2 (ortholog); mitochondrial complex IV deficiency nuclear type 9 (ortholog); FOUND IN mitochondrion (ortholog) 4 113622509 113633135 - 30032202 116899300 MODEL JAAIVD010000003;XM_032900956 XP_032756847 protein-coding 626116500 Ubl5 ubiquitin like 5 INVOLVED IN positive regulation of protein targeting to mitochondrion (ortholog); FOUND IN cytoplasm (ortholog) 8 16913894 16915708 + 22301074;30032202 116906718 MODEL JAAIVD010000027;XM_032909526;XM_032909527 XP_032765417;XP_032765418 ubiquitin-like protein 5 protein-coding 626116512 LOC116895900 ankyrin repeat domain-containing protein 26-like 3 117901683 117939548 + 116895900 MODEL JAAIVD010000012;XM_032896985 XP_032752876 protein-coding 626116524 LOC116895272 small proline-rich protein 2I 3 1714849 1715079 - 22301074 116895272 MODEL JAAIVD010000012;XM_032896590 XP_032752481 protein-coding 626116527 Lrrtm2 leucine rich repeat transmembrane neuronal 2 ENCODES a protein that exhibits neurexin family protein binding (ortholog); INVOLVED IN long-term synaptic potentiation (ortholog); negative regulation of receptor internalization (ortholog); positive regulation of synapse assembly (ortholog); FOUND IN excitatory synapse (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 15 9133687 9138991 + 22301074;30032202 116884743 MODEL JAAIVD010000010;XM_032885961 XP_032741852 leucine-rich repeat transmembrane neuronal protein 2 protein-coding 626116532 LOC116890337 U6 spliceosomal RNA 1 13303417 13303523 + 116890337 MODEL JAAIVD010000025;XR_004386559 snrna 626116535 LOC116889962 olfactory receptor 6C65-like 1 161936478 161937416 + 22301074;30032202 116889962 MODEL JAAIVD010000025;XM_032890761 XP_032746652 protein-coding 626116538 LOC116907035 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like 8 87352438 87353064 - 116907035 MODEL JAAIVD010000027 pseudo 626116539 LOC116906406 small nucleolar RNA SNORD113/SNORD114 family 7 127198481 127198552 + 116906406 MODEL JAAIVD010000026;XR_004388670 snorna 626116542 Thap8 THAP domain containing 8 2 165716391 165720371 - 116893373 MODEL JAAIVD010000001;XM_032895172 XP_032751063 THAP domain-containing protein 8 protein-coding 626116549 Kiaa1328 KIAA1328 ortholog 15 18405640 18692874 - 116884697 MODEL JAAIVD010000010;XM_032885880;XM_032885881 XP_032741771;XP_032741772 protein hinderin protein-coding 626116567 Rbm39 RNA binding motif protein 39 ENCODES a protein that exhibits RS domain binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN regulation of mRNA splicing, via spliceosome (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN centriolar satellite (ortholog); microtubule cytoskeleton (ortholog); nuclear speck (ortholog) 5 135506482 135540247 - 22301074;30032202 116902199 MODEL JAAIVD010000023;XM_032904565;XM_032904566;XM_032904567;XM_032904568;XM_032904569;XM_032904570;XM_032904571;XM_032904572;XM_032904573;XM_032904575;XM_032904576;XM_032904577;XM_032904578 XP_032760456;XP_032760457;XP_032760458;XP_032760459;XP_032760460;XP_032760461;XP_032760462;XP_032760463;XP_032760464;XP_032760466;XP_032760467;XP_032760468;XP_032760469 RNA-binding protein 39 protein-coding 626116615 LOC116910319 keratin-associated protein 4-12-like 9 54478148 54484504 - 22301074;30032202 116910319 MODEL JAAIVD010000002;XM_032914183 XP_032770074 protein-coding 626116620 Phlpp2 PH domain and leucine rich repeat protein phosphatase 2 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); INVOLVED IN hippocampus development (ortholog); protein dephosphorylation (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; protein kinase C (PKC) signaling pathway; FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 29579212 29649334 + 22301074 116886564 MODEL JAAIVD010000011;XM_032888081 XP_032743972 PH domain leucine-rich repeat-containing protein phosphatase 2 protein-coding 626116643 Gnb3 G protein subunit beta 3 ENCODES a protein that exhibits GTPase binding (ortholog); spectrin binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); regulation of cholesterol metabolic process (ortholog); regulation of fat cell differentiation (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH carotid artery disease (ortholog); congenital stationary night blindness (ortholog); congenital stationary night blindness 1H (ortholog); FOUND IN cell body (ortholog); dendrite (ortholog); heterotrimeric G-protein complex (ortholog) 6 23050943 23057703 + 22301074;30032202 116903272 MODEL JAAIVD010000024;XM_032905688 XP_032761579 guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3 protein-coding 626116657 LOC116909639 serine protease 33-like 9 1169980 1176062 + 22301074 116909639 MODEL JAAIVD010000002;XM_032913283 XP_032769174 protein-coding 626116666 LOC116885085 U6 spliceosomal RNA 15 68788367 68788473 - 116885085 MODEL JAAIVD010000010;XR_004385957 snrna 626116669 Eya2 EYA transcriptional coactivator and phosphatase 2 ENCODES a protein that exhibits histone H2AXY142 phosphatase activity (ortholog); magnesium ion binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN extrinsic apoptotic signaling pathway in absence of ligand (ortholog); mitochondrial outer membrane permeabilization (ortholog); striated muscle tissue development (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 5 152193346 152297994 - 22301074;30032202 116902330 MODEL JAAIVD010000023;XM_032904801 XP_032760692 eyes absent homolog 2 protein-coding 626116688 Nxt1 nuclear transport factor 2 like export factor 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN mRNA export from nucleus (ortholog); protein export from nucleus (ortholog); RNA export from nucleus (ortholog); PARTICIPATES IN NXF1-NXT1 export pathway; FOUND IN cytosol (ortholog); nuclear pore (ortholog); nuclear RNA export factor complex (ortholog) 5 128207047 128207816 + 30032202 116902075 MODEL JAAIVD010000023;XM_032904365 XP_032760256 NTF2-related export protein 1 protein-coding 626116693 Bsdc1 BSD domain containing 1 1 28664615 28693868 - 30032202 116896133 MODEL JAAIVD010000025;XM_032897118 XP_032753009 BSD domain-containing protein 1 protein-coding 626116708 LOC116910261 40S ribosomal protein S28-like 9 32209823 32210088 - 116910261 MODEL JAAIVD010000002 pseudo 626116709 LOC116887671 uncharacterized LOC116887671 18 16169158 16169489 + 116887671 MODEL JAAIVD010000013;XR_004386229 ncrna 626116713 LOC116905592 paired box protein Pax-6-like 7 6116378 6116875 - 30032202 116905592 MODEL JAAIVD010000026;XM_032908596 XP_032764487 protein-coding 626116716 Actl10 actin like 10 5 133919712 133920872 + 116899979 MODEL JAAIVD010000023;XM_032901797 XP_032757688 actin-like protein 10 protein-coding 626116719 LOC116884929 40S ribosomal protein S29-like 15 14569917 14570139 - 116884929 MODEL JAAIVD010000010 pseudo 626116720 LOC116909546 RNA-binding protein PNO1-like 9 61684688 61685617 + 22301074;30032202 116909546 MODEL JAAIVD010000002;XM_032913162 XP_032769053 protein-coding 626116725 LOC116895123 U4 spliceosomal RNA 2 8891275 8891360 + 116895123 MODEL JAAIVD010000001 pseudo 626116726 Rab3c RAB3C, member RAS oncogene family ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); GTPase activity (ortholog); myosin V binding (ortholog); INVOLVED IN antigen processing and presentation (ortholog); regulation of exocytosis (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); synaptic vesicle (ortholog); synaptic vesicle membrane (ortholog) 3 186744725 186954409 + 22301074;30032202 116897202 MODEL JAAIVD010000012;XM_032898906;XM_032898907;XM_032898908;XM_032898909 XP_032754797;XP_032754798;XP_032754799;XP_032754800 ras-related protein Rab-3C protein-coding 626116744 Mtap methylthioadenosine phosphorylase ENCODES a protein that exhibits S-methyl-5-thioadenosine phosphorylase activity (ortholog); INVOLVED IN methylation (ortholog); nicotinamide riboside catabolic process (ortholog); response to testosterone (ortholog); PARTICIPATES IN glycine N-methyltransferase deficiency pathway; homocystinuria pathway; hypermethioninemia pathway; ASSOCIATED WITH biliary tract benign neoplasm (ortholog); common bile duct neoplasm (ortholog); diaphyseal medullary stenosis with malignant fibrous histiocytoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 65067397 65120581 - 22301074;30032202 116900372 MODEL JAAIVD010000025;XM_032902124 XP_032758015 S-methyl-5'-thioadenosine phosphorylase protein-coding 626116756 Ttyh1 tweety family member 1 ENCODES a protein that exhibits calcium ion binding (ortholog); chloride channel activity (ortholog); volume-sensitive anion channel activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cell-cell adhesion (ortholog); cell-substrate adhesion (ortholog); FOUND IN filopodium membrane (ortholog); filopodium tip (ortholog); membrane (ortholog) 2 176628175 176646822 + 30032202 116892642 MODEL JAAIVD010000001;XM_032894462;XM_032894463 XP_032750353;XP_032750354 protein tweety homolog 1 protein-coding 626116777 Lamtor3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinase activator activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); intracellular protein localization (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN FNIP-folliculin RagC/D GAP (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 3 21242982 21254584 - 30032202 116896214 MODEL JAAIVD010000012;XM_032897267;XM_032897268;XM_032897269 XP_032753158;XP_032753159;XP_032753160 ragulator complex protein LAMTOR3 protein-coding 626116793 Scg3 secretogranin III INVOLVED IN protein localization to secretory granule (ortholog); ASSOCIATED WITH Metabolic Syndrome (ortholog); schizophrenia (ortholog); FOUND IN secretory granule membrane (ortholog) 8 69925331 69964309 - 30032202 116906865 MODEL JAAIVD010000027;XM_032909767 XP_032765658 secretogranin-3 protein-coding 626116809 LOC116900430 olfactory receptor 4C15-like 5 70642960 70643891 - 116900430 MODEL JAAIVD010000023 pseudo 626116810 LOC116898933 uncharacterized LOC116898933 4 46669635 46688634 - 116898933 MODEL JAAIVD010000003;XR_004387675 ncrna 626116814 Slc38a1 solute carrier family 38 member 1 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid:sodium symporter activity (ortholog); glycine:sodium symporter activity (ortholog); INVOLVED IN amino acid import (ortholog); female pregnancy (ortholog); gamma-aminobutyric acid biosynthetic process (ortholog); ASSOCIATED WITH Experimental Seizures (ortholog); hepatocellular carcinoma (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); external side of apical plasma membrane (ortholog) 1 269413580 269481657 - 30032202 116884450 MODEL JAAIVD010000025;XM_032885550 XP_032741441 sodium-coupled neutral amino acid transporter 1 protein-coding 626116834 Mrps28 mitochondrial ribosomal protein S28 INVOLVED IN mitochondrial translation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 47 (ortholog); FOUND IN mitochondrion (ortholog) 3 142952895 143056890 - 30032202 116897026 MODEL JAAIVD010000012;XM_032898639 XP_032754530 28S ribosomal protein S28, mitochondrial protein-coding 626116841 LOC116897760 non-histone chromosomal protein HMG-17-like 4 7386771 7388322 + 116897760 MODEL JAAIVD010000003 pseudo 626116842 Cdk7 cyclin dependent kinase 7 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); kinase activity (ortholog); INVOLVED IN positive regulation of meiotic cell cycle process involved in oocyte maturation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; RNA polymerase II transcription pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN CAK-ERCC2 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); cytoplasm (ortholog) 3 158081283 158107366 - 22301074;30032202 116897098 MODEL JAAIVD010000012;XM_032898741 XP_032754632 cyclin-dependent kinase 7 protein-coding 626116858 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 29215965 29216037 - 116897679 MODEL JAAIVD010000012 trna 626116859 LOC116898949 uncharacterized LOC116898949 4 48352542 48355398 - 116898949 MODEL JAAIVD010000003;XR_004387676 ncrna 626116863 Prkacb protein kinase cAMP-activated catalytic subunit beta ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); dorsal/ventral neural tube patterning (ortholog); negative regulation of meiotic cell cycle (ortholog); PARTICIPATES IN adenosine signaling pathway; dopamine signaling pathway; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH adrenal cortical adenoma (ortholog); biliary tract benign neoplasm (ortholog); brain ischemia (ortholog); FOUND IN cAMP-dependent protein kinase complex (ortholog); centrosome (ortholog); ciliary base (ortholog) 3 14072678 14163160 + 22301074;30032202 116896166 MODEL JAAIVD010000012;XM_032897198;XM_032897199;XM_032897200;XM_032897201 XP_032753089;XP_032753090;XP_032753091;XP_032753092 cAMP-dependent protein kinase catalytic subunit beta protein-coding 626116888 LOC116906756 zinc finger protein 501-like 1 157507433 157520552 + 30032202 116906756 MODEL JAAIVD010000025;XM_032909588 XP_032765479 protein-coding 626116896 Apoa5 apolipoprotein A5 ENCODES a protein that exhibits enzyme binding (ortholog); heparin binding (ortholog); lipase activator activity (ortholog); INVOLVED IN acylglycerol homeostasis (ortholog); animal organ regeneration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN lipoprotein metabolic pathway; ASSOCIATED WITH cerebral infarction (ortholog); coronary artery disease (ortholog); familial apolipoprotein A5 deficiency (ortholog); FOUND IN chylomicron (ortholog); extracellular region (ortholog); extracellular space (ortholog) 8 40782715 40784990 + 22301074;30032202 116908163 MODEL JAAIVD010000027;XM_032911462 XP_032767353 apolipoprotein A-V protein-coding 626116902 Abhd15 abhydrolase domain containing 15 INVOLVED IN adipose tissue development (ortholog); lipid catabolic process (ortholog) 9 96185660 96191036 + 30032202 116908537 MODEL JAAIVD010000002;XM_032911732 XP_032767623 protein ABHD15 protein-coding 626116908 LOC116908181 ADP-ribosylation factor-like protein 6-interacting protein 1 8 51874086 51875310 + 116908181 MODEL JAAIVD010000027 pseudo 626116909 Idh2 isocitrate dehydrogenase (NADP(+)) 2 ENCODES a protein that exhibits isocitrate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN NADP+ biosynthetic process (ortholog); negative regulation of glial cell migration (ortholog); negative regulation of glial cell proliferation (ortholog); ASSOCIATED WITH 2-hydroxyglutaric aciduria (ortholog); acute myeloid leukemia (ortholog); acute myocardial infarction (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); peroxisome (ortholog) 2 120143000 120162929 + 22301074;30032202 116891931 MODEL JAAIVD010000001;XM_032893372 XP_032749263 isocitrate dehydrogenase [NADP], mitochondrial protein-coding 626116924 LOC116902790 14-3-3 protein theta-like 6 77372205 77372960 + 116902790 MODEL JAAIVD010000024 pseudo 626116925 Polr3g RNA polymerase III subunit G ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN cell population proliferation (ortholog); epithelial cell proliferation (ortholog); positive regulation of innate immune response (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 3 214664933 214704298 + 22301074;30032202 116897332 MODEL JAAIVD010000012;XM_032899088 XP_032754979 DNA-directed RNA polymerase III subunit RPC7 protein-coding 626116937 LOC116890315 U5 spliceosomal RNA 1 40813339 40813454 + 116890315 MODEL JAAIVD010000025;XR_004386539 snrna 626116940 LOC116897714 eukaryotic translation initiation factor 4E-like 4 74699104 74699627 - 22301074;30032202 116897714 MODEL JAAIVD010000003;XM_032899173 XP_032755064 protein-coding 626116944 LOC116898396 eukaryotic translation initiation factor 4 gamma 2-like 4 79638226 79639446 - 116898396 MODEL JAAIVD010000003 pseudo 626116945 LOC116912031 uncharacterized LOC116912031 1 235940416 235963661 - 116912031 MODEL JAAIVD010000025;XR_004389414 ncrna 626116950 LOC116901926 40S ribosomal protein S14-like 5 105938249 105939375 - 22301074;30032202 116901926 MODEL JAAIVD010000023;XM_032904149 XP_032760040 protein-coding 626116955 LOC116907107 vitamin K epoxide reductase complex subunit 1-like protein 1 8 13115086 13115617 + 116907107 MODEL JAAIVD010000027 pseudo 626116956 Tpp2 tripeptidyl peptidase 2 ENCODES a protein that exhibits aminopeptidase activity (ortholog); identical protein binding (ortholog); peptide binding (ortholog); INVOLVED IN intracellular amino acid homeostasis (ortholog); protein catabolic process (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Evans Syndrome, Immunodeficiency, and Premature Immunosenescence associated with Tripeptidyl-Peptidase II Deficiency (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 4 119983358 120056494 + 22301074;30032202 116899346 MODEL JAAIVD010000003;XM_032901034;XM_032901035;XM_032901036 XP_032756925;XP_032756926;XP_032756927 tripeptidyl-peptidase 2 protein-coding 626116995 LOC116886736 small nucleolar RNA SNORA17 17 4966819 4966951 + 116886736 MODEL JAAIVD010000011;XR_004386144 snorna 626116998 Poldip3 DNA polymerase delta interacting protein 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN poly(A)+ mRNA export from nucleus (ortholog); positive regulation of translation (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); nuclear speck (ortholog) 1 252543582 252572403 - 30032202 116914383 MODEL JAAIVD010000025;XM_032918595;XM_032918604 XP_032774486;XP_032774495 polymerase delta-interacting protein 3 protein-coding 626117014 LOC116894314 glyceraldehyde-3-phosphate dehydrogenase-like 2 144731031 144732250 + 116894314 MODEL JAAIVD010000001;XR_004387022 pseudo 626117017 Flrt2 fibronectin leucine rich transmembrane protein 2 ENCODES a protein that exhibits chemorepellent activity (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); basement membrane organization (ortholog); cell adhesion involved in heart morphogenesis (ortholog); FOUND IN cell-cell junction (ortholog); extracellular space (ortholog); focal adhesion (ortholog) 7 107549253 107640572 - 22301074;30032202 116905337 MODEL JAAIVD010000026;XM_032908233;XM_032908234 XP_032764124;XP_032764125 leucine-rich repeat transmembrane protein FLRT2 protein-coding 626117026 Naaladl2 N-acetylated alpha-linked acidic dipeptidase like 2 INVOLVED IN response to bacterium (ortholog); FOUND IN nucleoplasm (ortholog) 3 129582334 130472357 + 116896997 MODEL JAAIVD010000012;XM_032898601 XP_032754492 inactive N-acetylated-alpha-linked acidic dipeptidase-like protein 2 protein-coding 626117044 Smtn smoothelin INVOLVED IN negative regulation of systemic arterial blood pressure (ortholog); positive regulation of cardiac muscle contraction (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 11 72514913 72535569 - 22301074;30032202 116912210 MODEL JAAIVD010000006;XM_032916157 XP_032772048 protein-coding 626117068 LOC116904427 histone-lysine N-methyltransferase SUV39H2-like 6 113723939 113724571 + 116904427 MODEL JAAIVD010000024 pseudo 626117069 Nkx2-5 NK2 homeobox 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN adult heart development (ortholog); apoptotic process involved in heart morphogenesis (ortholog); atrial cardiac muscle tissue development (ortholog); ASSOCIATED WITH aortic valve disease 2 (ortholog); atrial fibrillation (ortholog); atrial heart septal defect (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Nkx-2.5 complex (ortholog) 9 4615250 4618109 + 22301074;30032202 116910003 MODEL JAAIVD010000002;XM_032913788 XP_032769679 homeobox protein Nkx-2.5 protein-coding 626117075 LOC116897566 small nucleolar RNA SNORA17 3 25352451 25352578 + 116897566 MODEL JAAIVD010000012;XR_004387577 snorna 626117078 Ermp1 endoplasmic reticulum metallopeptidase 1 INVOLVED IN cellular response to oxidative stress (ortholog); endoplasmic reticulum unfolded protein response (ortholog); ovarian follicle development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); chronic kidney disease (ortholog) 2 29712315 29745258 - 30032202 116891075 MODEL JAAIVD010000001;XM_032891781;XM_032891782 XP_032747672;XP_032747673 protein-coding 626117101 Cer1 cerberus 1, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); morphogen activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); anterior/posterior pattern specification (ortholog); bone mineralization (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH Spinal Fractures (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 1 70843332 70846689 + 30032202 116888156 MODEL JAAIVD010000025;XM_032889484 XP_032745375 cerberus protein-coding 626117107 LOC116892475 rho guanine nucleotide exchange factor 1 2 169781491 169801493 - 22301074;30032202 116892475 MODEL JAAIVD010000001;XM_032894200;XM_032894201;XM_032894202;XM_032894203;XM_032894204 XP_032750091;XP_032750092;XP_032750093;XP_032750094;XP_032750095 protein-coding 626117142 Slc25a18 solute carrier family 25 member 18 ENCODES a protein that exhibits amino acid:proton symporter activity (ortholog); INVOLVED IN L-glutamate transmembrane transport (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 6 25947206 25967454 - 30032202 116903326 MODEL JAAIVD010000024;XM_032905767 XP_032761658 mitochondrial glutamate carrier 2 protein-coding 626117156 LOC116887924 GSK3B-interacting protein-like 1 65044742 65045125 - 30032202 116887924 MODEL JAAIVD010000025;XM_032889392 XP_032745283 protein-coding 626117159 LOC116911810 small nucleolar RNA snR60/Z15/Z230/Z193/J17 10 40327033 40327113 + 116911810 MODEL JAAIVD010000005;XR_004389349 snorna 626117162 Lbp lipopolysaccharide binding protein ENCODES a protein that exhibits coreceptor activity (ortholog); lipopeptide binding (ortholog); lipopolysaccharide binding (ortholog); INVOLVED IN acute-phase response (ortholog); cell surface pattern recognition receptor signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Burns (ortholog); Chemical and Drug Induced Liver Injury (ortholog); Drug Hypersensitivity Syndrome (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 5 137646061 137673279 + 22301074;30032202 116900732 MODEL JAAIVD010000023;XM_032902438 XP_032758329 lipopolysaccharide-binding protein protein-coding 626117181 Adam28 ADAM metallopeptidase domain 28 ENCODES a protein that exhibits immunoglobulin receptor binding (ortholog); metallopeptidase activity (ortholog); ASSOCIATED WITH asbestos-related lung carcinoma (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 12 55547598 55765926 + 22301074;30032202 116913638 MODEL JAAIVD010000007;XM_032917907 XP_032773798 disintegrin and metalloproteinase domain-containing protein 28 protein-coding 626117199 LOC116890199 keratin, type II cytoskeletal 78-like 1 261125359 261132207 + 22301074;30032202 116890199 MODEL JAAIVD010000025;XM_032890933 XP_032746824 protein-coding 626117211 LOC116907995 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase ENCODES a protein that exhibits sterol 12-alpha-hydroxylase activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); positive regulation of intestinal cholesterol absorption (ortholog); response to cholesterol (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); extrahepatic cholestasis (ortholog) 8 113075343 113077363 - 22301074;30032202 116907995 MODEL JAAIVD010000027;XM_032911248 XP_032767139 protein-coding 626117216 Scyl1 SCY1 like pseudokinase 1 INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 21 (ortholog); genetic disease (ortholog); hereditary ataxia (ortholog); FOUND IN cis-Golgi network (ortholog); COPI vesicle coat (ortholog); cytoplasm (ortholog) 2 1922715 1936363 + 22301074 116890695 MODEL JAAIVD010000001;XM_032891114;XM_032891115 XP_032747005;XP_032747006 N-terminal kinase-like protein protein-coding 626117241 LOC116888274 uncharacterized LOC116888274 X 5944691 5946774 - 116888274 MODEL JAAIVD010000014;XR_004386299 ncrna 626117245 LOC116891399 uncharacterized LOC116891399 2 69748582 69752987 - 30032202 116891399 MODEL JAAIVD010000001;XM_032892423 XP_032748314 uncharacterized protein LOC116891399 protein-coding 626117249 LOC116884309 protocadherin alpha-3-like 15 7421422 7425164 - 22301074 116884309 MODEL JAAIVD010000010;XM_032885417 XP_032741308 protein-coding 626117254 Mpc2 mitochondrial pyruvate carrier 2 ENCODES a protein that exhibits identical protein binding (ortholog); pyruvate transmembrane transporter activity (ortholog); INVOLVED IN positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); pyruvate import into mitochondria (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 10 44575745 44598425 + 22301074;30032202 116911090 MODEL JAAIVD010000005;XM_032914919;XM_032914920;XM_032914921 XP_032770810;XP_032770811;XP_032770812 protein-coding 626117273 LOC116913602 olfactory receptor 1537-like 12 132968 133909 - 116913602 MODEL JAAIVD010000007 pseudo 626117274 LOC116905709 glyceraldehyde-3-phosphate dehydrogenase-like 7 68200380 68201379 - 116905709 MODEL JAAIVD010000026 pseudo 626117275 LOC116914169 U6 spliceosomal RNA 12 70162766 70162871 + 116914169 MODEL JAAIVD010000007;XR_004389714 snrna 626117278 Dbnl drebrin like ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN neuron projection morphogenesis (ortholog); podosome assembly (ortholog); postsynaptic actin cytoskeleton organization (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); dendrite (ortholog) 11 74746968 74761517 + 30032202 116912183 MODEL JAAIVD010000006;XM_032916116;XM_032916117;XM_032916118 XP_032772007;XP_032772008;XP_032772009 drebrin-like protein protein-coding 626117299 LOC116899928 U1 spliceosomal RNA 4 128611402 128611570 - 116899928 MODEL JAAIVD010000003;XR_004387897 snrna 626117302 Sdcbp2 syndecan binding protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 5 130954350 130964342 + 22301074;30032202 116902106 MODEL JAAIVD010000023;XM_032904416 XP_032760307 syntenin-2 protein-coding 626117314 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41835348 41835421 + 116884223 MODEL JAAIVD010000009 trna 626117315 LOC116898583 protein SET-like 4 167241866 167243987 + 116898583 MODEL JAAIVD010000003 pseudo 626117316 Hsdl2 hydroxysteroid dehydrogenase like 2 ENCODES a protein that exhibits steroid dehydrogenase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) 1 91810099 91845379 - 30032202 116901495 MODEL JAAIVD010000025;XM_032903466 XP_032759357 hydroxysteroid dehydrogenase-like protein 2 protein-coding 626117331 LOC116898417 uncharacterized LOC116898417 4 88422325 88424060 - 116898417 MODEL JAAIVD010000003 pseudo 626117332 Hsd11b1 hydroxysteroid 11-beta dehydrogenase 1 ENCODES a protein that exhibits 11-beta-hydroxysteroid dehydrogenase (NADP+) activity (ortholog); NADP binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); glucocorticoid biosynthetic process (ortholog); glucocorticoid catabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH Abdominal Obesity (ortholog); allergic contact dermatitis (ortholog); coronary artery disease (ortholog); FOUND IN apical part of cell (ortholog); endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) 10 71206156 71251408 - 30032202 116911462 MODEL JAAIVD010000005;XM_032915436;XM_032915437 XP_032771327;XP_032771328 corticosteroid 11-beta-dehydrogenase isozyme 1 protein-coding 626117346 LOC116911540 alpha-1,3-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like protein MGAT4E 10 1305603 1308892 - 30032202 116911540 MODEL JAAIVD010000005;XM_032915528 XP_032771419 protein-coding 626117351 LOC116904474 high mobility group protein B3-like 6 138311832 138312562 - 116904474 MODEL JAAIVD010000024 pseudo 626117352 LOC116890306 U4 spliceosomal RNA 1 65171076 65171226 + 116890306 MODEL JAAIVD010000025 pseudo 626117353 Siglec10 sialic acid binding Ig like lectin 10 ENCODES a protein that exhibits phosphatase binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN negative regulation of inflammatory response to wounding (ortholog); FOUND IN plasma membrane (ortholog) 2 156060871 156069016 - 30032202 116894370 MODEL JAAIVD010000001;XM_032896075;XM_032896076 XP_032751966;XP_032751967 sialic acid-binding Ig-like lectin 10 protein-coding 626117369 LOC116897799 cytochrome P450 2J2-like 4 5145783 5150340 - 22301074;30032202 116897799 MODEL JAAIVD010000003;XM_032899218 XP_032755109 protein-coding 626117376 Rab11a RAB11A, member RAS oncogene family ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); G protein activity (ortholog); GTP binding (ortholog); INVOLVED IN amyloid-beta clearance by transcytosis (ortholog); astral microtubule organization (ortholog); early endosome to recycling endosome transport (ortholog); PARTICIPATES IN autophagy pathway; eicosanoid signaling pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Chloracne (ortholog); intellectual disability (ortholog); microcephaly (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); cleavage furrow (ortholog) 8 59024080 59046420 - 22301074;30032202 116907081 MODEL JAAIVD010000027;XM_032910035 XP_032765926 ras-related protein Rab-11A protein-coding 626117385 LOC116897519 small nucleolar RNA SNORA48 3 190805141 190805281 + 116897519 MODEL JAAIVD010000012;XR_004387535 snorna 626117388 LOC116908372 small nucleolar RNA SNORA32 8 11110810 11110931 + 116908372 MODEL JAAIVD010000027;XR_004388920 snorna 626117391 LOC116883464 heat shock cognate 71 kDa protein-like 14 31644423 31651570 - 116883464 MODEL JAAIVD010000009 pseudo 626117392 LOC116884415 serine/threonine-protein phosphatase 4 regulatory subunit 1-like 15 74516517 74518492 - 116884415 MODEL JAAIVD010000010 pseudo 626117393 Rpl31 ribosomal protein L31 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); cytosolic large ribosomal subunit (ortholog) 4 115609246 115613285 + 22301074;30032202 116899316 MODEL JAAIVD010000003;XM_032900983 XP_032756874 60S ribosomal protein L31 protein-coding 626117402 Ap3b2 adaptor related protein complex 3 subunit beta 2 INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 48 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN presynapse (ortholog) 2 118768204 118801724 + 22301074;30032202 116891903 MODEL JAAIVD010000001;XM_032893319;XM_032893320 XP_032749210;XP_032749211 AP-3 complex subunit beta-2 protein-coding 626117434 LOC116884356 ral guanine nucleotide dissociation stimulator-like 15 38936376 38937910 + 116884356 MODEL JAAIVD010000010;XM_032885484 XP_032741375 protein-coding 626117439 LOC116891188 cytochrome P450 2G1 2 42526105 42537474 - 22301074;30032202 116891188 MODEL JAAIVD010000001;XM_032892008 XP_032747899 protein-coding 626117451 LOC116903983 40S ribosomal protein S14-like 1 34918702 34922347 + 116903983 MODEL JAAIVD010000025 pseudo 626117452 Baz1b bromodomain adjacent to zinc finger domain 1B ENCODES a protein that exhibits histone binding (ortholog); histone H2AXY142 kinase activity (ortholog); INVOLVED IN chromatin organization (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN B-WICH complex (ortholog); condensed chromosome (ortholog); nuclear replication fork (ortholog) 16 18773596 18832624 - 22301074;30032202 116885927 MODEL JAAIVD010000004;XM_032887235 XP_032743126 tyrosine-protein kinase BAZ1B protein-coding 626117475 B3galnt2 beta-1,3-N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein glycosylation (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A11 (ortholog); genetic disease (ortholog); muscular dystrophy-dystroglycanopathy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 14 32696553 32736576 + 22301074;30032202 116883987 MODEL JAAIVD010000009;XM_032885223 XP_032741114 UDP-GalNAc:beta-1,3-N-acetylgalactosaminyltransferase 2 protein-coding 626117491 LOC116902655 U6 spliceosomal RNA 5 25586756 25586862 + 116902655 MODEL JAAIVD010000023;XR_004388218 snrna 626117494 Csgalnact2 chondroitin sulfate N-acetylgalactosaminyltransferase 2 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); proteoglycan biosynthetic process (ortholog); FOUND IN Golgi apparatus (ortholog) 6 28598917 28630316 + 22301074;30032202 116903352 MODEL JAAIVD010000024;XM_032905822;XM_032905824;XM_032905825;XM_032905826;XM_032905827 XP_032761713;XP_032761715;XP_032761716;XP_032761717;XP_032761718 protein-coding 626117520 LOC116891260 C-C motif chemokine 27-like 1 3780212 3784826 + 22301074;30032202 116891260 MODEL JAAIVD010000025;XM_032892149;XM_032892157;XM_032892167;XM_032892175;XM_032892183 XP_032748040;XP_032748048;XP_032748058;XP_032748066;XP_032748074 uncharacterized protein LOC116891260 protein-coding 626117541 LOC116888227 melanoma-associated antigen B4-like X 129667356 129668563 - 30032202 116888227 MODEL JAAIVD010000014;XM_032889515 XP_032745406 protein-coding 626117544 LOC116892662 uncharacterized LOC116892662 2 177263458 177265014 - 116892662 MODEL JAAIVD010000001;XR_004386962 ncrna 626117549 Stk40 serine/threonine kinase 40 INVOLVED IN glycogen metabolic process (ortholog); lung alveolus development (ortholog); lung development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 32151896 32188711 - 22301074 116896709 MODEL JAAIVD010000025;XM_032898127 XP_032754018 serine/threonine-protein kinase 40 protein-coding 626117564 Chmp1b charged multivesicular body protein 1B ENCODES a protein that exhibits identical protein binding (ortholog); MIT domain binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagy (ortholog); cell division (ortholog); FOUND IN amphisome membrane (ortholog); autophagosome membrane (ortholog); endosome membrane (ortholog) 15 64091921 64094618 - 30032202 116884324 MODEL JAAIVD010000010;XM_032885459 XP_032741350 protein-coding 626117569 LOC116905403 60S ribosomal protein L32-like 7 119747723 119748160 + 116905403 MODEL JAAIVD010000026 pseudo 626117570 Snx29 sorting nexin 29 9 10554704 10959769 - 22301074 116909319 MODEL JAAIVD010000002;XM_032912855;XM_032912856;XM_032912857;XR_004389065 XP_032768746;XP_032768747;XP_032768748 sorting nexin-29 protein-coding 626117602 LOC116900496 olfactory receptor 4A47-like 5 71902117 71903061 - 22301074 116900496 MODEL JAAIVD010000023;XM_032902230 XP_032758121 protein-coding 626117605 LOC116885881 tubulin beta-4B chain-like 16 14743731 14744716 + 116885881 MODEL JAAIVD010000004 pseudo 626117606 LOC116909369 olfactory receptor 1361-like 9 25750625 25751563 + 22301074;30032202 116909369 MODEL JAAIVD010000002;XM_032912919 XP_032768810 protein-coding 626117609 Cnr2 cannabinoid receptor 2 ENCODES a protein that exhibits cannabinoid receptor activity (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); leukocyte chemotaxis (ortholog); negative regulation of action potential (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); alcohol use disorder (ortholog); Animal Disease Models (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog) 1 22310161 22335555 - 22301074;30032202 116886670 MODEL JAAIVD010000025;XM_032888165;XM_032888172 XP_032744056;XP_032744063 protein-coding 626117623 LOC116893394 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 2 170003419 170008315 - 116893394 MODEL JAAIVD010000001 pseudo 626117624 LOC116894628 polyadenylate-binding protein 1-like 2 188493498 188496569 - 22301074;30032202 116894628 MODEL JAAIVD010000001;XM_032896346 XP_032752237 protein-coding 626117629 Slco5a1 solute carrier organic anion transporter family member 5A1 FOUND IN plasma membrane (ortholog) 1 147515308 147636188 - 22301074;30032202 116903961 MODEL JAAIVD010000025;XM_032906758 XP_032762649 protein-coding 626117643 Dnlz DNL-type zinc finger ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 5 10736368 10738309 + 22301074;30032202 116901272 MODEL JAAIVD010000023;XM_032903038;XM_032903039;XR_004387970 XP_032758929;XP_032758930 DNL-type zinc finger protein protein-coding 626117656 LOC116906607 60S ribosomal protein L35-like 8 27908406 27908793 - 116906607 MODEL JAAIVD010000027 pseudo 626117657 LOC116884016 protein FAM240B-like 14 75100655 75106614 + 116884016 MODEL JAAIVD010000009;XM_032885254 XP_032741145 protein-coding 626117662 Rab44 RAB44, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); INVOLVED IN histamine secretion by mast cell (ortholog); histamine secretion mediated by IgE immunoglobulin (ortholog); mast cell degranulation (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 18 4730108 4757356 - 22301074 116887141 MODEL JAAIVD010000013;XM_032888690 XP_032744581 ras-related protein Rab-44 protein-coding 626117678 Srl sarcalumenin INVOLVED IN response to muscle activity involved in regulation of muscle adaptation (ortholog); store-operated calcium entry (ortholog); ASSOCIATED WITH Rubinstein-Taybi syndrome (ortholog) 9 17360092 17402419 + 22301074 116909240 MODEL JAAIVD010000002;XM_032912744;XM_032912745 XP_032768635;XP_032768636 protein-coding 626117690 Tasor transcription activation suppressor ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN anterior/posterior axis specification, embryo (ortholog); constitutive heterochromatin formation (ortholog); mesodermal to mesenchymal transition involved in gastrulation (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN heterochromatin (ortholog); nucleoplasm (ortholog) 13 3149225 3206175 + 30032202 116914485 MODEL JAAIVD010000008;XM_032918795;XM_032918796;XM_032918797 XP_032774686;XP_032774687;XP_032774688 protein TASOR protein-coding 626117722 LOC116895270 small proline-rich protein 2G-like 3 1672696 1673087 - 22301074 116895270 MODEL JAAIVD010000012;XM_032896588 XP_032752479 protein-coding 626117726 Phox2a paired like homeobox 2A ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN locus ceruleus development (ortholog); midbrain development (ortholog); noradrenergic neuron differentiation (ortholog); ASSOCIATED WITH congenital fibrosis of the extraocular muscles 2 (ortholog); Fibrosis (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); nucleus (ortholog) 2 100112898 100117266 + 22301074;30032202 116891767 MODEL JAAIVD010000001;XM_032893090 XP_032748981 paired mesoderm homeobox protein 2A protein-coding 626117733 LOC116894012 olfactory receptor 51B4 2 101751783 101752718 + 22301074 116894012 MODEL JAAIVD010000001;XM_032895727 XP_032751618 protein-coding 626117736 Ccdc112 coiled-coil domain containing 112 FOUND IN centriolar satellite (ortholog) 15 40745986 40773730 + 116884592 MODEL JAAIVD010000010;XM_032885734 XP_032741625 coiled-coil domain-containing protein 112 protein-coding 626117750 LOC116897931 olfactory receptor Olfr180-like 4 42826573 42827532 - 22301074;30032202 116897931 MODEL JAAIVD010000003;XM_032899331 XP_032755222 protein-coding 626117753 Zgpat zinc finger CCCH-type and G-patch domain containing ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of epidermal growth factor-activated receptor activity (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 5 158459260 158475648 + 22301074;30032202 116902437 MODEL JAAIVD010000023;XM_032904974;XM_032904975 XP_032760865;XP_032760866 zinc finger CCCH-type with G patch domain-containing protein protein-coding 626117767 Cldn8 claudin 8 ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN apicolateral plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 4 55287514 55289989 + 30032202 116899021 MODEL JAAIVD010000003;XM_032900469 XP_032756360 claudin-8 protein-coding 626117772 Bgn biglycan ENCODES a protein that exhibits cytokine binding (ortholog); extracellular matrix binding (ortholog); glycosaminoglycan binding (ortholog); INVOLVED IN articular cartilage development (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); ASSOCIATED WITH aortic disease (ortholog); Breast Neoplasms (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cell surface (ortholog); extracellular matrix (ortholog); sarcolemma (ortholog) X 129102643 129114817 + 22301074;30032202 116888317 MODEL JAAIVD010000014;XM_032889590 XP_032745481 protein-coding 626117784 LOC116894109 olfactory receptor 56B1-like 2 103598629 103599588 + 22301074 116894109 MODEL JAAIVD010000001;XM_032895828 XP_032751719 protein-coding 626117787 Pnpla7 patatin like domain 7, lysophospholipase ENCODES a protein that exhibits phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH Autosomal Recessive Peripheral Neuropathy with or without Impaired Intellectual Development (ortholog); mulibrey nanism (ortholog); primary ovarian insufficiency (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 5 12135923 12214944 - 22301074;30032202 116901328 MODEL JAAIVD010000023;XM_032903144 XP_032759035 patatin like phospholipase domain containing 7;patatin-like phospholipase domain-containing protein 7 protein-coding 626117825 Mss51 MSS51 mitochondrial translational activator 12 90290868 90295182 - 116913472 MODEL JAAIVD010000007;XM_032917674 XP_032773565 putative protein MSS51 homolog, mitochondrial protein-coding 626117835 LOC116894768 solute carrier family 2, facilitated glucose transporter member 3-like 2 207835695 207836704 + 116894768 MODEL JAAIVD010000001 pseudo 626117836 Clec2l C-type lectin domain family 2 member L 6 101125015 101143219 - 116903940 MODEL JAAIVD010000024;XM_032906721 XP_032762612 protein-coding 626117845 Rab29 RAB29, member RAS oncogene family ENCODES a protein that exhibits dynein complex binding (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular detoxification (ortholog); cilium assembly (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); FOUND IN cis-Golgi network (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 3965324 3970881 - 22301074 116911460 MODEL JAAIVD010000005;XM_032915429 XP_032771320 ras-related protein Rab-7L1 protein-coding 626117854 LOC116888785 spindlin-2-like X 645622 646411 + 22301074;30032202 116888785 MODEL JAAIVD010000014;XM_032890067 XP_032745958 protein-coding 626117859 Znf711 zinc finger protein 711 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); zinc ion binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); non-syndromic X-linked intellectual disability (ortholog); FOUND IN nucleus (ortholog) X 69305280 69337395 - 22301074;30032202 116888493 MODEL JAAIVD010000014;XM_032889769 XP_032745660 protein-coding 626117873 LOC116883530 prolactin-8A4 14 46272510 46278919 + 22301074;30032202 116883530 MODEL JAAIVD010000009;XM_032884701;XM_032884702;XM_032884703;XM_032884704 XP_032740592;XP_032740593;XP_032740594;XP_032740595 protein-coding 626117893 LOC116883273 heat shock cognate 71 kDa protein-like 14 74783780 74785873 - 116883273 MODEL JAAIVD010000009;XR_004385739 pseudo 626117896 Stk11 serine/threonine kinase 11 ENCODES a protein that exhibits ATP binding (ortholog); LRR domain binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); anoikis (ortholog); axonogenesis (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); B-lymphoblastic leukemia/lymphoma (ortholog); bile duct cancer (ortholog); FOUND IN centrosome (ortholog); cilium (ortholog); cytoplasm (ortholog) 1 154744704 154760762 - 22301074;30032202 116905351 MODEL JAAIVD010000025;XM_032908264;XM_032908273;XM_032908282 XP_032764155;XP_032764164;XP_032764173 serine/threonine-protein kinase STK11 protein-coding 626117918 Znf341 zinc finger protein 341 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); ASSOCIATED WITH hyper IgE recurrent infection syndrome 3 (ortholog); FOUND IN nucleus (ortholog) 5 133984922 134017099 + 116902164 MODEL JAAIVD010000023;XM_032904505 XP_032760396 protein-coding 626117938 LOC116907354 olfactory receptor 7G2-like 8 14872189 14873127 - 22301074;30032202 116907354 MODEL JAAIVD010000027;XM_032910287 XP_032766178 protein-coding 626117941 LOC116894348 uncharacterized LOC116894348 2 154840794 154841938 - 116894348 MODEL JAAIVD010000001;XR_004387023 ncrna 626117945 Akt1 AKT serine/threonine kinase 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATP binding (ortholog); calmodulin binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); anaphase-promoting complex-dependent catabolic process (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN adenosine signaling pathway; altered phosphatidylinositol 3-kinase-Akt signaling pathway; ceramide signaling pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute promyelocytic leukemia (ortholog); adenocarcinoma (ortholog); FOUND IN cell-cell junction (ortholog); ciliary basal body (ortholog); cilium (ortholog) 7 130247175 130267462 - 22301074 116905516 MODEL JAAIVD010000026;XM_032908539 XP_032764430 RAC-alpha serine/threonine-protein kinase protein-coding 626117963 Dnaaf5 dynein axonemal assembly factor 5 ENCODES a protein that exhibits dynein intermediate chain binding (ortholog); INVOLVED IN cilium movement (ortholog); inner dynein arm assembly (ortholog); outer dynein arm assembly (ortholog); ASSOCIATED WITH male infertility (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 18 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); microtubule cytoskeleton (ortholog) 16 14006908 14046555 - 30032202 116885546 MODEL JAAIVD010000004;XM_032886840 XP_032742731 dynein assembly factor 5, axonemal protein-coding 626117980 Scube1 signal peptide, CUB domain and EGF like domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 1 253025508 253143029 - 22301074;30032202 116914458 MODEL JAAIVD010000025;XM_032918762 XP_032774653 signal peptide, CUB and EGF-like domain-containing protein 1 protein-coding 626118007 LOC116888675 nuclear autoantigenic sperm protein-like X 39500722 39502080 + 30032202 116888675 MODEL JAAIVD010000014;XM_032889974 XP_032745865 protein-coding 626118012 Lynx1 Ly6/neurotoxin 1 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); acetylcholine receptor inhibitor activity (ortholog); acetylcholine receptor regulator activity (ortholog); INVOLVED IN regulation of neurotransmitter receptor activity (ortholog); synaptic transmission, cholinergic (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 1 247493515 247495694 - 116912527 MODEL JAAIVD010000025;XM_032916630 XP_032772521 ly-6/neurotoxin-like protein 1 protein-coding 626118020 LOC116904455 DNA-directed RNA polymerases I and III subunit RPAC2-like 6 130514703 130515705 + 116904455 MODEL JAAIVD010000024 pseudo 626118021 Kif2b kinesin family member 2B INVOLVED IN metaphase chromosome alignment (ortholog); microtubule depolymerization (ortholog); regulation of chromosome segregation (ortholog) 9 53940582 53942795 + 22301074;30032202 116909709 MODEL JAAIVD010000002;XM_032913379 XP_032769270 kinesin-like protein KIF2B protein-coding 626118026 LOC116900291 olfactory receptor 8K3-like 5 63614961 63618888 - 22301074;30032202 116900291 MODEL JAAIVD010000023;XM_032902046 XP_032757937 protein-coding 626118031 LOC116903442 histone-lysine N-methyltransferase SETMAR 6 38696767 38700818 - 22301074;30032202 116903442 MODEL JAAIVD010000024;XM_032905996 XP_032761887 protein-coding 626118037 LOC116910280 protein RoBo-1-like 9 39435718 39439726 + 116910280 MODEL JAAIVD010000002;XM_032914154 XP_032770045 protein-coding 626118044 LOC116895856 mitochondrial fission 1 protein-like 3 91697733 91698846 + 116895856 MODEL JAAIVD010000012 pseudo 626118045 LOC116887325 olfactory receptor 1361-like 18 10420872 10421801 + 22301074;30032202 116887325 MODEL JAAIVD010000013;XM_032888918 XP_032744809 protein-coding 626118048 LOC116890319 submandibular gland protein C-like 1 264852182 264869325 + 116890319 MODEL JAAIVD010000025;XM_032891004 XP_032746895 protein-coding 626118062 LOC116894901 U6 spliceosomal RNA 2 1776317 1776415 + 116894901 MODEL JAAIVD010000001 pseudo 626118063 LOC116902069 uncharacterized LOC116902069 5 127558539 127614368 - 116902069 MODEL JAAIVD010000023;XR_004388038 ncrna 626118070 Taf12 TATA-box binding protein associated factor 12 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); RNA polymerase II general transcription initiation factor activity (ortholog); INVOLVED IN DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription initiation pathway; FOUND IN nucleus (ortholog); SAGA complex (ortholog); transcription factor TFIID complex (ortholog) 1 25956745 25974349 - 22301074;30032202 116895577 MODEL JAAIVD010000025;XM_032896807;XM_032896808;XM_032896815 XP_032752698;XP_032752699;XP_032752706 transcription initiation factor TFIID subunit 12 protein-coding 626118086 LOC116884078 small nucleolar RNA SNORA17 14 81907644 81907772 - 116884078 MODEL JAAIVD010000009;XR_004385823 snorna 626118089 Trpv5 transient receptor potential cation channel subfamily V member 5 ENCODES a protein that exhibits calcium channel activity (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH gestational diabetes (ortholog); pre-eclampsia (ortholog); FOUND IN apical plasma membrane (ortholog); calcium channel complex (ortholog); plasma membrane (ortholog) 6 98937674 98961178 + 22301074;30032202 116903908 MODEL JAAIVD010000024;XM_032906674;XM_032906675 XP_032762565;XP_032762566 protein-coding 626118108 LOC116894297 cytochrome P450 2B3 2 138402767 138443410 + 22301074;30032202 116894297 MODEL JAAIVD010000001;XM_032896001 XP_032751892 protein-coding 626118121 Enpp3 ectonucleotide pyrophosphatase/phosphodiesterase 3 ENCODES a protein that exhibits bis(5'-adenosyl)-pentaphosphatase activity (ortholog); bis(5'-adenosyl)-triphosphatase activity (ortholog); bis(5'-nucleosyl)-tetraphosphatase (asymmetrical) activity (ortholog); INVOLVED IN ATP metabolic process (ortholog); basophil activation involved in immune response (ortholog); inorganic diphosphate transport (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog); plasma membrane (ortholog) 2 210827960 210898068 - 22301074;30032202 116894682 MODEL JAAIVD010000001;XM_032896385 XP_032752276 ectonucleotide pyrophosphatase/phosphodiesterase family member 3 protein-coding 626118150 Casd1 CAS1 domain sialic acid O acetyltransferase 1 ENCODES a protein that exhibits N-acetylneuraminate 9-O-acetyltransferase activity (ortholog); INVOLVED IN carbohydrate metabolic process (ortholog); FOUND IN Golgi membrane (ortholog) 6 133973865 134016550 - 30032202 116904103 MODEL JAAIVD010000024;XM_032906975 XP_032762866 CAS1 domain containing 1;N-acetylneuraminate 9-O-acetyltransferase protein-coding 626118172 LOC116905565 60S ribosomal protein L8-like 7 86188687 86189456 - 116905565 MODEL JAAIVD010000026 pseudo 626118173 LOC116905080 uncharacterized LOC116905080 7 100455957 100471827 + 116905080 MODEL JAAIVD010000026;XR_004388483 ncrna 626118178 LOC116902698 trypsin-4 6 41794705 41798415 - 22301074;30032202 116902698 MODEL JAAIVD010000024;XM_032905054 XP_032760945 protein-coding 626118187 Chchd1 coiled-coil-helix-coiled-coil-helix domain containing 1 FOUND IN cytosol (ortholog); fibrillar center (ortholog); mitochondrion (ortholog) 12 90511253 90512430 + 30032202 116913808 MODEL JAAIVD010000007;XM_032918115 XP_032774006 coiled-coil-helix-coiled-coil-helix domain-containing protein 1 protein-coding 626118194 LOC116890183 keratin, type II cytoskeletal 6A-like 1 261444887 261450326 - 116890183 MODEL JAAIVD010000025 pseudo 626118195 LOC116894938 small nucleolar RNA SNORD115 2 140312284 140312360 - 116894938 MODEL JAAIVD010000001;XR_004387136 snorna 626118198 Six6 SIX homeobox 6 ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Isolated Microphthalmia with Cataract 2 (ortholog); myopia (ortholog); optic disc anomalies with retinal and/or macular dystrophy (ortholog) 7 87205618 87210561 + 30032202 116905767 MODEL JAAIVD010000026;XM_032908735 XP_032764626 homeobox protein SIX6 protein-coding 626118204 Erbb2 erb-b2 receptor tyrosine kinase 2 ENCODES a protein that exhibits coreceptor activity (ortholog); ErbB-3 class receptor binding (ortholog); growth factor binding (ortholog); INVOLVED IN axon regeneration (ortholog); cell population proliferation (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); PARTICIPATES IN altered epidermal growth factor/neuregulin signaling pathway; endometrial cancer pathway; epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); amblyopia (ortholog); Animal Disease Models (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 9 55958937 55981801 - 22301074;30032202 116908698 MODEL JAAIVD010000002;XM_032912022 XP_032767913 receptor tyrosine-protein kinase erbB-2 protein-coding 626118235 Tmem171 transmembrane protein 171 3 197920513 197927529 + 116897256 MODEL JAAIVD010000012;XM_032898989;XM_032898990 XP_032754880;XP_032754881 protein-coding 626118244 LOC116909121 transcription initiation factor TFIID subunit 7-like 1 194284256 194285413 - 22301074;30032202 116909121 MODEL JAAIVD010000025;XM_032912600;XM_032912609 XP_032768491;XP_032768500 protein-coding 626118250 Smim33 small integral membrane protein 33 15 8643720 8645915 - 116884541 MODEL JAAIVD010000010;XM_032885676 XP_032741567 protein-coding 626118256 Znf329 zinc finger protein 329 2 174369422 174383234 + 30032202 116892622 MODEL JAAIVD010000001;XM_032894433;XM_032894434 XP_032750324;XP_032750325 protein-coding 626118265 LOC116891005 vomeronasal type-2 receptor 116-like 2 16564050 16572857 + 22301074;30032202 116891005 MODEL JAAIVD010000001;XM_032891684;XM_032891685;XM_032891686 XP_032747575;XP_032747576;XP_032747577 protein-coding 626118278 LOC116883596 prolactin-7A2 14 46751678 46762555 - 22301074;30032202 116883596 MODEL JAAIVD010000009;XM_032884776 XP_032740667 protein-coding 626118288 Eif2b4 eukaryotic translation initiation factor 2B subunit delta ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); myelination (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) 7 22892877 22898559 + 116905977 MODEL JAAIVD010000026;XM_032908988;XM_032908989 XP_032764879;XP_032764880 translation initiation factor eIF-2B subunit delta protein-coding 626118309 Gnb1l G protein subunit beta 1 like INVOLVED IN DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); social behavior (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 3791034 3815599 + 22301074 116898673 MODEL JAAIVD010000003;XM_032899922 XP_032755813 guanine nucleotide-binding protein subunit beta-like protein 1 protein-coding 626118319 LOC116904670 small nucleolar RNA SNORA72 6 118107720 118107847 + 116904670 MODEL JAAIVD010000024;XR_004388370 snorna 626118322 Crocc ciliary rootlet coiled-coil, rootletin ENCODES a protein that exhibits actin binding (ortholog); kinesin binding (ortholog); structural constituent of cytoskeleton (ortholog); INVOLVED IN cellular homeostasis (ortholog); centriole-centriole cohesion (ortholog); centrosome cycle (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN 9+2 motile cilium (ortholog); actin cytoskeleton (ortholog); centriole (ortholog) 1 17094435 17130614 + 30032202 116893492 MODEL JAAIVD010000025;XM_032895240 XP_032751131 rootletin protein-coding 626118363 LOC116887938 40S ribosomal protein S2-like X 61694147 61711108 - 116887938 MODEL JAAIVD010000014 pseudo 626118364 LOC116889998 peptidyl-prolyl cis-trans isomerase A-like 1 177872400 177872828 - 116889998 MODEL JAAIVD010000025 pseudo 626118365 LOC116898299 developmental pluripotency-associated protein 3-like 4 129084055 129084505 + 116898299 MODEL JAAIVD010000003 pseudo 626118366 Myrf myelin regulatory factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN central nervous system myelin maintenance (ortholog); central nervous system myelination (ortholog); oligodendrocyte development (ortholog); ASSOCIATED WITH Cardiac-Urogenital Syndrome (ortholog); cerebral infarction (ortholog); congenital diaphragmatic hernia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum membrane (ortholog) 2 9687519 9718285 - 22301074;30032202 116890948 MODEL JAAIVD010000001;XM_032891593;XM_032891594 XP_032747484;XP_032747485 protein-coding 626118401 LOC116885726 vomeronasal type-2 receptor 116-like 16 15771450 15805475 - 116885726 MODEL JAAIVD010000004 pseudo 626118402 Nae1 NEDD8 activating enzyme E1 subunit 1 ENCODES a protein that exhibits NEDD8 activating enzyme activity (ortholog); protein heterodimerization activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN mitotic DNA replication checkpoint signaling (ortholog); neuron apoptotic process (ortholog); protein neddylation (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH Alzheimer's disease (ortholog); middle cerebral artery infarction (ortholog); NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND ISCHIOPUBIC HYPOPLASIA (ortholog); FOUND IN early endosome (ortholog); glutamatergic synapse (ortholog); protein-containing complex (ortholog) 17 12783396 12810028 - 22301074;30032202 116886204 MODEL JAAIVD010000011;XM_032887590 XP_032743481 NEDD8-activating enzyme E1 regulatory subunit protein-coding 626118426 LOC116897537 small nucleolar RNA SNORA48 3 91942349 91942485 + 116897537 MODEL JAAIVD010000012 pseudo 626118427 LOC116912931 U6 spliceosomal RNA 11 92444009 92444077 + 116912931 MODEL JAAIVD010000006 pseudo 626118428 Il12b interleukin 12B ENCODES a protein that exhibits cytokine activity (ortholog); cytokine receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH ankylosing spondylitis (ortholog); anogenital venereal wart (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 9 27231037 27240467 + 22301074;30032202 116910501 MODEL JAAIVD010000002;XM_032914397;XM_032914398 XP_032770288;XP_032770289 interleukin-12 subunit beta protein-coding 626118439 LOC116885061 small nucleolar RNA SNORA17 15 64723922 64724042 + 116885061 MODEL JAAIVD010000010 pseudo 626118440 Tceanc2 transcription elongation factor A N-terminal and central domain containing 2 1 47632339 47669651 + 22301074;30032202 116899311 MODEL JAAIVD010000025;XM_032900979 XP_032756870 transcription elongation factor A N-terminal and central domain-containing protein 2 protein-coding 626118448 Mkrn3 makorin ring finger protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH autistic disorder (ortholog); central precocious puberty 2 (ortholog); genetic disease (ortholog) 2 137518673 137521196 + 22301074;30032202 116892015 MODEL JAAIVD010000001;XM_032893478 XP_032749369 probable E3 ubiquitin-protein ligase makorin-3 protein-coding 626118453 Emp3 epithelial membrane protein 3 (MAM blood group) INVOLVED IN apoptotic process (ortholog); bleb assembly (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 2 153599554 153602832 + 30032202 116892117 MODEL JAAIVD010000001;XM_032893599 XP_032749490 epithelial membrane protein 3 protein-coding 626118462 Ptma prothymosin alpha ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone binding (ortholog); histone chaperone activity (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of NF-kappaB transcription factor activity (ortholog); ASSOCIATED WITH adenoma (ortholog); Lung Neoplasms (ortholog); polycystic kidney disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 158661484 158665570 + 1989881;30032202 116899591 MODEL JAAIVD010000003;X55326;XM_032901531 CAA39028;XP_032757422 MYC-regulated;alpha-prothymosin protein-coding 626118471 Gng10 G protein subunit gamma 10 FOUND IN heterotrimeric G-protein complex (ortholog) 1 92399928 92407086 - 22301074;30032202 116901560 MODEL JAAIVD010000025;XM_032903559 XP_032759450 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10 protein-coding 626118478 Gtf2b general transcription factor IIB ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor binding (ortholog); nuclear thyroid hormone receptor binding (ortholog); INVOLVED IN chromosome organization (ortholog); gene expression (ortholog); meiotic sister chromatid cohesion (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN cell division site (ortholog); chromosome (ortholog); condensed chromosome (ortholog) 3 17955417 17974088 - 22301074;30032202 116896192 MODEL JAAIVD010000012;XM_032897240 XP_032753131 transcription initiation factor IIB protein-coding 626118489 Mettl13 methyltransferase 13, eEF1A N-terminus and K55 ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); ASSOCIATED WITH Nonsyndromic Deafness, Modifier 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 10 41806828 41821147 - 116911355 MODEL JAAIVD010000005;XM_032915275 XP_032771166 Eef1aknmt eEF1A lysine and N-terminal methyltransferase;methyltransferase 13, eEF1A lysine and N-terminal methyltransferase protein-coding 626118502 C2H19orf18 chromosome 2 C19orf18 homolog ASSOCIATED WITH substance-related disorder (ortholog) 2 174047242 174054761 - 116893414 MODEL JAAIVD010000001;XM_032895196 XP_032751087 uncharacterized protein C19orf18 homolog protein-coding 626118510 Mest mesoderm specific transcript INVOLVED IN fat cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of protein glycosylation (ortholog); ASSOCIATED WITH Barth syndrome (ortholog); Childhood Schizophrenia (ortholog); Weight Gain (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 6 108814326 108825955 - 22301074 116903997 MODEL JAAIVD010000024;XM_032906802 XP_032762693 mesoderm-specific transcript homolog protein protein-coding 626118526 Hnrnpd heterogeneous nuclear ribonucleoprotein D ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); minor groove of adenine-thymine-rich DNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); mCRD-mediated mRNA stability complex (ortholog) 11 10215403 10233593 - 22301074;30032202 116912108 MODEL JAAIVD010000006;XM_032916007;XM_032916008 XP_032771898;XP_032771899 heterogeneous nuclear ribonucleoprotein D0 protein-coding 626118540 LOC116883594 cathepsin L1-like 14 77354738 77357931 + 30032202 116883594 MODEL JAAIVD010000009;XM_032884773 XP_032740664 protein-coding 626118550 LOC116905615 heat shock protein HSP 90-beta-like 7 15866538 15879601 - 116905615 MODEL JAAIVD010000026 pseudo 626118551 Midn midnolin ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN negative regulation of glucokinase activity (ortholog); negative regulation of insulin secretion (ortholog); proteasomal ubiquitin-independent protein catabolic process (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 154717653 154727899 - 22301074;30032202 116905314 MODEL JAAIVD010000025;XM_032908207;XM_032908215;XM_032908223;XM_032908230;XM_032908237 XP_032764098;XP_032764106;XP_032764114;XP_032764121;XP_032764128 protein-coding 626118577 LOC116893254 insulin-like growth factor 1 receptor 2 132335605 132391412 - 116893254 MODEL JAAIVD010000001;XM_032895115 XP_032751006 protein-coding 626118584 Cgas cyclic GMP-AMP synthase ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP synthase activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cAMP-mediated signaling (ortholog); cellular response to exogenous dsRNA (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 8 72619102 72629510 - 30032202 116906920 MODEL JAAIVD010000027;XM_032909844 XP_032765735 protein-coding 626118593 Adck5 aarF domain containing kinase 5 FOUND IN mitochondrion (ortholog) 1 248908591 248926879 + 116913271 MODEL JAAIVD010000025;XM_032917410;XM_032917411 XP_032773301;XP_032773302 uncharacterized aarF domain-containing protein kinase 5 protein-coding 626118617 Mrps22 mitochondrial ribosomal protein S22 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); Adult-Onset Muscular Dystrophy with Leukoencephalopathy (ortholog); Breast Neoplasms (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 8 89959915 89972688 - 30032202 116907114 MODEL JAAIVD010000027;XM_032910088 XP_032765979 28S ribosomal protein S22, mitochondrial protein-coding 626118629 LOC116910369 60S ribosomal protein L35-like 9 79975974 79976323 - 116910369 MODEL JAAIVD010000002 pseudo 626118630 LOC116908240 nudC domain-containing protein 2-like 1 158905677 158909721 + 116908240 MODEL JAAIVD010000025 pseudo 626118631 LOC116889548 small nucleolar RNA U13 X 113263081 113263184 + 116889548 MODEL JAAIVD010000014;XR_004386482 snorna 626118634 Dhx35 DEAH-box helicase 35 INVOLVED IN in utero embryonic development (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) 5 138138959 138202279 + 30032202 116902244 MODEL JAAIVD010000023;XM_032904662 XP_032760553 probable ATP-dependent RNA helicase DHX35 protein-coding 626118660 LOC116899782 U6 spliceosomal RNA 4 76025839 76025943 + 116899782 MODEL JAAIVD010000003;XR_004387792 snrna 626118663 LOC116891729 ubiquitin-like protein FUBI 2 98093900 98094281 + 116891729 MODEL JAAIVD010000001 pseudo 626118664 Ppp2r5d protein phosphatase 2 regulatory subunit B'delta ENCODES a protein that exhibits protein phosphatase activator activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN negative regulation of peptidyl-threonine phosphorylation (ortholog); PARTICIPATES IN dopamine signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 35 (ortholog); brain disease (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog) 4 83159402 83181829 + 22301074;30032202 116899098 MODEL JAAIVD010000003;XM_032900607;XM_032900609 XP_032756498;XP_032756500 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit delta isoform protein-coding 626118686 Wwc1 WW and C2 domain containing 1 ENCODES a protein that exhibits kinase binding (ortholog); molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cell migration (ortholog); hippo signaling (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH malignant mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 9 19020411 19170430 - 30032202 116910407 MODEL JAAIVD010000002;XM_032914249 XP_032770140 protein KIBRA protein-coding 626118713 Stag3 STAG3 cohesin complex component INVOLVED IN establishment of meiotic sister chromatid cohesion (ortholog); homologous chromosome pairing at meiosis (ortholog); protein localization to chromosome (ortholog); ASSOCIATED WITH Female Infertility (ortholog); genetic disease (ortholog); premature menopause (ortholog); FOUND IN condensed nuclear chromosome (ortholog); lateral element (ortholog); male germ cell nucleus (ortholog) 16 15993255 16023459 - 30032202 116885735 MODEL JAAIVD010000004;XM_032887045 XP_032742936 cohesin subunit SA-3;stromal antigen 3 protein-coding 626118749 LOC116904880 alpha-1-antiproteinase-like 7 114934371 114941605 - 30032202 116904880 MODEL JAAIVD010000026;XM_032907480 XP_032763371 protein-coding 626118758 LOC116901872 barrier-to-autointegration factor-like 5 99873613 99873877 + 116901872 MODEL JAAIVD010000023 pseudo 626118759 Dynlt3 dynein light chain Tctex-type 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of mitotic cell cycle (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN cytoplasmic dynein complex (ortholog); kinetochore (ortholog); mitotic spindle astral microtubule (ortholog) X 14166820 14175967 - 30032202 116888794 MODEL JAAIVD010000014;XM_032890074 XP_032745965 protein-coding 626118768 LOC116907763 putative olfactory receptor 10D4 8 82785153 82786133 - 22301074 116907763 MODEL JAAIVD010000027;XM_032910902 XP_032766793 protein-coding 626118771 LOC116912308 vomeronasal type-2 receptor 116-like 11 18977661 18989508 - 22301074;30032202 116912308 MODEL JAAIVD010000006;XM_032916322;XM_032916323;XM_032916324;XM_032916325;XM_032916326;XM_032916327;XM_032916328 XP_032772213;XP_032772214;XP_032772215;XP_032772216;XP_032772217;XP_032772218;XP_032772219 protein-coding 626118792 Casp8ap2 caspase 8 associated protein 2 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity involved in apoptotic process (ortholog); identical protein binding (ortholog); protease binding (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); Fas signaling pathway (ortholog); PARTICIPATES IN aldosterone signaling pathway; FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 1 110374074 110409934 - 30032202 116902378 MODEL JAAIVD010000025;XM_032904887;XM_032904895 XP_032760778;XP_032760786 CASP8-associated protein 2 protein-coding 626118811 C1H1orf159 chromosome 1 C1orf159 homolog 1 4532673 4550913 - 116891702 MODEL JAAIVD010000025;XM_032892971;XM_032892979;XM_032892988;XM_032892997;XM_032893007 XP_032748862;XP_032748870;XP_032748879;XP_032748888;XP_032748898 uncharacterized protein C1orf159 homolog protein-coding 626118834 LOC116888982 uncharacterized LOC116888982 X 10215381 10224654 - 116888982 MODEL JAAIVD010000014;XR_004386358 ncrna 626118839 Bcl2l1 BCL2 like 1 ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); clathrin binding (ortholog); INVOLVED IN apoptotic process in bone marrow cell (ortholog); cellular response to alkaloid (ortholog); cellular response to amino acid stimulus (ortholog); PARTICIPATES IN erythropoietin signaling pathway; interleukin-3 signaling pathway; intrinsic apoptotic pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN Bcl-2 family protein complex (ortholog); centrosome (ortholog); clathrin-coated pit (ortholog) 5 132108601 132158316 - 30032202 116902127 MODEL JAAIVD010000023;XM_032904444;XM_032904446;XM_032904447;XM_032904448;XM_032904449;XM_032904450;XM_032904451 XP_032760335;XP_032760337;XP_032760338;XP_032760339;XP_032760340;XP_032760341;XP_032760342 bcl-2-like protein 1 protein-coding 626118861 LOC116900205 prothymosin alpha-like 5 51986798 51987203 + 116900205 MODEL JAAIVD010000023 pseudo 626118862 Tmem150b transmembrane protein 150B ASSOCIATED WITH COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 2 177291508 177300286 - 116892664 MODEL JAAIVD010000001;XM_032894487;XM_032894488 XP_032750378;XP_032750379 modulator of macroautophagy TMEM150B protein-coding 626118875 Lyrm4 LYR motif containing 4 ENCODES a protein that exhibits protein homodimerization activity (ortholog); structural molecule activity (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster protein biogenesis pathway; ASSOCIATED WITH combined oxidative phosphorylation deficiency 19 (ortholog); FOUND IN mitochondrial [2Fe-2S] assembly complex (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 14 55077059 55185210 - 22301074;30032202 116883330 MODEL JAAIVD010000009;XM_032884400 XP_032740291 LYR motif-containing protein 4 protein-coding 626118882 Gon7 GON7 subunit of KEOPS complex INVOLVED IN tRNA threonylcarbamoyladenosine modification (ortholog); ASSOCIATED WITH Galloway-Mowat syndrome (ortholog); Galloway-Mowat Syndrome 9 (ortholog); FOUND IN cytosol (ortholog); EKC/KEOPS complex (ortholog); nucleolus (ortholog) 7 114026685 114031200 - 22301074;30032202 116905363 MODEL JAAIVD010000026;XM_032908288 XP_032764179 EKC/KEOPS complex subunit GON7 protein-coding 626118888 Caskin2 CASK interacting protein 2 9 68251221 68265530 + 22301074 116908603 MODEL JAAIVD010000002;XM_032911826 XP_032767717 caskin-2 protein-coding 626118912 Traf1 TNF receptor associated factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); thioesterase binding (ortholog); tumor necrosis factor receptor binding (ortholog); INVOLVED IN positive regulation of NF-kappaB transcription factor activity (ortholog); regulation of extrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH multiple sclerosis (ortholog); patent ductus arteriosus (ortholog); Prostatic Neoplasms (ortholog) 5 691768 711646 + 22301074;30032202 116901105 MODEL JAAIVD010000023;XM_032902668;XM_032902669 XP_032758559;XP_032758560 TNF receptor-associated factor 1 protein-coding 626118928 Dpy19l3 dpy-19 like C-mannosyltransferase 3 ENCODES a protein that exhibits mannosyltransferase activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 162892113 162953092 + 22301074;30032202 116892260 MODEL JAAIVD010000001;XM_032893845;XM_032893846;XM_032893847 XP_032749736;XP_032749737;XP_032749738 probable C-mannosyltransferase DPY19L3 protein-coding 626118958 LOC116893715 olfactory receptor 5B3-like 2 13475025 13475953 - 116893715 MODEL JAAIVD010000001 pseudo 626118959 LOC116902535 small nucleolar RNA SNORA15 5 98599529 98599637 - 116902535 MODEL JAAIVD010000023 pseudo 626118960 LOC116906506 U2 spliceosomal RNA 7 44897641 44897796 + 116906506 MODEL JAAIVD010000026 pseudo 626118961 Acp3 acid phosphatase 3 ENCODES a protein that exhibits 5'-nucleotidase activity (ortholog); acid phosphatase activity (ortholog); choline binding (ortholog); INVOLVED IN adenosine metabolic process (ortholog); dephosphorylation (ortholog); nucleotide metabolic process (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); extracellular space (ortholog); filopodium (ortholog) 8 95605715 95650560 - 30032202 116907955 MODEL JAAIVD010000027;XM_032911180 XP_032767071 prostatic acid phosphatase protein-coding 626118976 LOC116893977 lysophospholipase-like protein 1 2 100656759 100657459 + 116893977 MODEL JAAIVD010000001 pseudo 626118977 Znf239 zinc finger protein 239 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog) 6 28864434 28871659 - 30032202 116903356 MODEL JAAIVD010000024;XM_032905829 XP_032761720 protein-coding 626118983 LOC116894714 prostaglandin D2 receptor 2-like 2 155268405 155269496 + 116894714 MODEL JAAIVD010000001 pseudo 626118984 LOC116904445 fatty acid-binding protein, heart-like 6 124807732 124808376 - 116904445 MODEL JAAIVD010000024 pseudo 626118985 Dntt DNA nucleotidylexotransferase ENCODES a protein that exhibits DNA nucleotidylexotransferase activity (ortholog); INVOLVED IN DNA metabolic process (ortholog); response to ATP (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); euchromatin (ortholog) 2 40151115 40182031 + 22301074;30032202 116893794 MODEL JAAIVD010000001;XM_032895497;XM_032895498;XM_032895499 XP_032751388;XP_032751389;XP_032751390 protein-coding 626119007 LOC116912427 cytochrome c oxidase assembly protein COX18, mitochondrial ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); protein insertion into mitochondrial inner membrane from matrix (ortholog); protein insertion into mitochondrial membrane (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 1 (ortholog); sensorineural hearing loss (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 11 3653178 3664639 - 30032202 116912427 MODEL JAAIVD010000006;XM_032916494 XP_032772385 protein-coding 626119017 LOC116889188 DNA-binding protein SATB2-like X 72781451 72783685 + 30032202 116889188 MODEL JAAIVD010000014;XM_032890349 XP_032746240 protein-coding 626119022 Abat 4-aminobutyrate aminotransferase ENCODES a protein that exhibits 4-aminobutyrate:2-oxoglutarate transaminase activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cerebellum development (ortholog); copulation (ortholog); exploration behavior (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH Abnormal Reflexes (ortholog); Alzheimer's disease (ortholog); Anorexia (ortholog); FOUND IN 4-aminobutyrate transaminase complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 13413444 13506271 - 22301074;30032202 116909292 MODEL JAAIVD010000002;XM_032912830 XP_032768721 4-aminobutyrate aminotransferase, mitochondrial protein-coding 626119042 Ubqln4 ubiquilin 4 ENCODES a protein that exhibits identical protein binding (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN DNA damage response (ortholog); negative regulation of autophagosome maturation (ortholog); negative regulation of double-strand break repair via homologous recombination (ortholog); FOUND IN autophagosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 64993306 65009249 - 30032202 116896681 MODEL JAAIVD010000012;XM_032898061;XM_032898062;XM_032898063 XP_032753952;XP_032753953;XP_032753954 ubiquilin-4 protein-coding 626119067 LOC116889756 heterogeneous nuclear ribonucleoprotein H-like 22301074;30032202 116889756 MODEL JAAIVD010000081;XM_032890617;XM_032890618 XP_032746508;XP_032746509 protein-coding 626119068 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41855154 41855227 - 116884169 MODEL JAAIVD010000009 trna 626119069 Get1 guided entry of tail-anchored proteins factor 1 INVOLVED IN establishment of localization in cell (ortholog); otic vesicle development (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN GET complex (ortholog) 4 48515274 48529654 - 22301074 116898951 MODEL JAAIVD010000003;XM_032900369 XP_032756260 tail-anchored protein insertion receptor WRB protein-coding 626119078 LOC116899783 U6 spliceosomal RNA 4 21233595 21233695 - 116899783 MODEL JAAIVD010000003 pseudo 626119079 LOC116911826 small nucleolar RNA SNORA17 10 11039300 11039428 - 116911826 MODEL JAAIVD010000005;XR_004389362 snorna 626119082 LOC116905717 60 kDa heat shock protein, mitochondrial-like 7 72597810 72600058 - 116905717 MODEL JAAIVD010000026 pseudo 626119083 LOC116883389 probable ATP-dependent RNA helicase DDX5 14 28811281 28813122 + 116883389 MODEL JAAIVD010000009 pseudo 626119084 LOC116902530 small nucleolar RNA SNORD113/SNORD114 family 5 17330977 17331056 + 116902530 MODEL JAAIVD010000023 pseudo 626119085 Entrep2 endosomal transmembrane epsin interactor 2 2 135289396 135696047 + 22301074 116892005 MODEL JAAIVD010000001;XM_032893466 XP_032749357 Fam189a1 family with sequence similarity 189 member A1;protein FAM189A1 protein-coding 626119099 Vamp4 vesicle associated membrane protein 4 INVOLVED IN cellular response to type II interferon (ortholog); endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 10 41841843 41867247 + 22301074;30032202 116911018 MODEL JAAIVD010000005;XM_032914750;XM_032914751 XP_032770641;XP_032770642 vesicle-associated membrane protein 4 protein-coding 626119116 LOC116904686 small nucleolar RNA SNORA21 6 159489657 159489792 - 116904686 MODEL JAAIVD010000024;XR_004388383 snorna 626119119 LOC116889811 adenosylhomocysteinase 30032202 116889811 MODEL JAAIVD010000961;XM_032890657 XP_032746548 protein-coding 626119120 Ranbp10 RAN binding protein 10 ENCODES a protein that exhibits beta-tubulin binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); microtubule cytoskeleton (ortholog); ubiquitin ligase complex (ortholog) 17 25499701 25562218 - 22301074;30032202 116886077 MODEL JAAIVD010000011;XM_032887392 XP_032743283 ran-binding protein 10 protein-coding 626119138 Ccnt1 cyclin T1 ENCODES a protein that exhibits 7SK snRNA binding (ortholog); chromatin binding (ortholog); cyclin-dependent protein serine/threonine kinase activator activity (ortholog); INVOLVED IN host-mediated activation of viral transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH congestive heart failure (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cyclin/CDK positive transcription elongation factor complex (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 271361109 271388976 - 30032202 116884731 MODEL JAAIVD010000025;XM_032885948;XR_004385891 XP_032741839 cyclin-T1 protein-coding 626119154 LOC116883359 60S ribosomal protein L29-like 14 29891393 29891900 - 116883359 MODEL JAAIVD010000009 pseudo 626119155 Pced1b PC-esterase domain containing 1B 1 270115327 270216232 + 116884516 MODEL JAAIVD010000025;XM_032885650;XM_032885658 XP_032741541;XP_032741549 PC-esterase domain-containing protein 1B protein-coding 626119166 LOC116904318 EMILIN-1-like 6 60476370 60479670 - 116904318 MODEL JAAIVD010000024 pseudo 626119167 Cltrn collectrin, amino acid transport regulator ENCODES a protein that exhibits protein homodimerization activity (ortholog); transporter activator activity (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); positive regulation of amino acid transport (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hepatocellular carcinoma (ortholog); Renal Aminoacidurias (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); plasma membrane (ortholog) X 24686036 24711972 + 116888622 MODEL JAAIVD010000014;XM_032889920 XP_032745811 collectrin protein-coding 626119177 Mmd monocyte to macrophage differentiation associated ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN positive regulation of neuron differentiation (ortholog); positive regulation of protein kinase activity (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN Golgi apparatus (ortholog) 9 80537748 80566342 - 22301074;30032202 116908961 MODEL JAAIVD010000002;XM_032912421 XP_032768312 monocyte to macrophage differentiation factor protein-coding 626119188 Fxn frataxin ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); [4Fe-4S] cluster assembly (ortholog); adult walking behavior (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH Charcot-Marie-Tooth Peroneal Muscular Atrophy and Friedreich Ataxia, Combined (ortholog); diabetes mellitus (ortholog); Friedreich ataxia (ortholog); FOUND IN cytosol (ortholog); mitochondrial [2Fe-2S] assembly complex (ortholog); mitochondrion (ortholog) 2 24374464 24399917 - 22301074;30032202 116891046 MODEL JAAIVD010000001;XM_032891736 XP_032747627 frataxin, mitochondrial protein-coding 626119197 LOC116906152 igE-binding protein-like 7 95617721 95619418 - 22301074 116906152 MODEL JAAIVD010000026;XM_032909134 XP_032765025 protein-coding 626119201 LOC116895778 glutathione S-transferase Mu 6-like 3 50304297 50308503 + 116895778 MODEL JAAIVD010000012 pseudo 626119202 Itga9 integrin subunit alpha 9 ENCODES a protein that exhibits collagen binding (ortholog); integrin binding involved in cell-matrix adhesion (ortholog); laminin binding (ortholog); INVOLVED IN cell adhesion (ortholog); negative regulation of vasoconstriction (ortholog); neutrophil chemotaxis (ortholog); PARTICIPATES IN altered integrin mediated signaling pathway; integrin mediated signaling pathway; pancreatic cancer pathway; ASSOCIATED WITH cerebral infarction (ortholog); congenital chylothorax (ortholog); hypertension (ortholog); FOUND IN basal plasma membrane (ortholog); integrin alpha9-beta1 complex (ortholog) 8 109840660 110134106 + 22301074;30032202 116907896 MODEL JAAIVD010000027;XM_032911092 XP_032766983 integrin alpha-9 protein-coding 626119233 LOC116899963 60S ribosomal protein L34-like 5 66372288 66373970 + 116899963 MODEL JAAIVD010000023 pseudo 626119234 Cggbp1 CGG triplet repeat binding protein 1 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN epigenetic regulation of gene expression (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 109580300 109587786 - 30032202 116905338 MODEL JAAIVD010000026;XM_032908235;XM_032908236 XP_032764126;XP_032764127 CGG triplet repeat-binding protein 1 protein-coding 626119245 Bcl11a BCL11 transcription factor A ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to L-glutamate (ortholog); negative regulation of branching morphogenesis of a nerve (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); apraxia (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 92812141 92907026 - 30032202 116912731 MODEL JAAIVD010000006;XM_032916865;XM_032916866;XM_032916867;XM_032916868;XM_032916869;XM_032916870;XM_032916871;XM_032916872;XM_032916874;XM_032916875 XP_032772756;XP_032772757;XP_032772758;XP_032772759;XP_032772760;XP_032772761;XP_032772762;XP_032772763;XP_032772765;XP_032772766 B-cell lymphoma/leukemia 11A;BAF chromatin remodeling complex subunit BCL11A protein-coding 626119286 LOC116889967 olfactory receptor 6C3-like 1 162067182 162068101 + 22301074;30032202 116889967 MODEL JAAIVD010000025;XM_032890764 XP_032746655 protein-coding 626119289 LOC116884944 cytosol aminopeptidase-like 15 23361949 23363037 - 116884944 MODEL JAAIVD010000010 pseudo 626119290 Muc4 mucin 4, cell surface associated ENCODES a protein that exhibits ErbB-2 class receptor binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); digestive tract development (ortholog); ASSOCIATED WITH allergic conjunctivitis (ortholog); Bile Duct Neoplasms (ortholog); biliary tract benign neoplasm (ortholog); FOUND IN apical plasma membrane (ortholog); extracellular space (ortholog); microvillus membrane (ortholog) 4 17551422 17579581 + 22301074;30032202 116898782 MODEL JAAIVD010000003;XM_032900119 XP_032756010 mucin-4 protein-coding 626119318 LOC116913875 glyceraldehyde-3-phosphate dehydrogenase-like 12 12457388 12458344 + 116913875 MODEL JAAIVD010000007 pseudo 626119319 C1H9orf43 chromosome 1 C9orf43 homolog 1 90984312 91008660 - 116901363 MODEL JAAIVD010000025;XM_032903220 XP_032759111 uncharacterized protein C9orf43 homolog protein-coding 626119337 Nlrp12 NLR family pyrin domain containing 12 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to cytokine stimulus (ortholog); dendritic cell migration (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH autoimmune interstitial lung, joint, and kidney disease (ortholog); Chediak-Higashi syndrome (ortholog); Childhood Schizophrenia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 177856986 177883542 - 22301074;30032202 116894553 MODEL JAAIVD010000001;XM_032896263 XP_032752154 NACHT, LRR and PYD domains-containing protein 12 protein-coding 626119349 LOC116906387 small nucleolar RNA SNORD113/SNORD114 family 7 127253940 127254013 + 116906387 MODEL JAAIVD010000026;XR_004388657 snorna 626119352 LOC116895025 small nucleolar RNA SNORA17 2 225627115 225627246 - 116895025 MODEL JAAIVD010000001;XR_004387211 snorna 626119355 LOC116893665 olfactory receptor 10V1-like 2 11973432 11974315 - 116893665 MODEL JAAIVD010000001 pseudo 626119356 LOC116886426 C-type lectin domain family 18 member A-like 17 30766284 30778879 - 30032202 116886426 MODEL JAAIVD010000011;XM_032887912 XP_032743803 protein-coding 626119372 Trps1 transcriptional repressor GATA binding 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondrocyte differentiation (ortholog); hair follicle development (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); bone development disease (ortholog); brachydactyly (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 225223812 225450076 - 22301074;30032202 116911326 MODEL JAAIVD010000025;XM_032915245;XM_032915252;XM_032915257;XM_032915266;XM_032915274;XM_032915281 XP_032771136;XP_032771143;XP_032771148;XP_032771157;XP_032771165;XP_032771172 zinc finger transcription factor Trps1 protein-coding 626119398 LOC116910727 U1 spliceosomal RNA 9 58473028 58473165 - 116910727 MODEL JAAIVD010000002 pseudo 626119399 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41855910 41855983 + 116884224 MODEL JAAIVD010000009 trna 626119400 LOC116893428 glyceraldehyde-3-phosphate dehydrogenase-like 2 175294407 175295092 + 116893428 MODEL JAAIVD010000001 pseudo 626119401 LOC116914371 KAT8 regulatory NSL complex subunit 2-like 13 78652709 78655058 + 116914371 MODEL JAAIVD010000008 pseudo 626119402 LOC116911285 putative ATP-dependent RNA helicase Pl10 10 65090845 65094275 + 22301074;30032202 116911285 MODEL JAAIVD010000005;XM_032915192 XP_032771083 protein-coding 626119407 Tmprss15 transmembrane serine protease 15 ASSOCIATED WITH Congenital, Hereditary, and Neonatal Diseases and Abnormalities (ortholog); enterokinase deficiency (ortholog) 4 62860013 62969794 + 22301074 116898002 MODEL JAAIVD010000003;XM_032899397;XM_032899398 XP_032755288;XP_032755289 enteropeptidase protein-coding 626119440 LOC116888781 prothymosin alpha-like X 3039693 3040028 + 116888781 MODEL JAAIVD010000014 pseudo 626119441 LOC116900041 uncharacterized LOC116900041 5 2155358 2157359 - 116900041 MODEL JAAIVD010000023;XR_004387910 ncrna 626119445 Zfp41 ZFP41 zinc finger protein ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog) 1 247941372 247951895 + 30032202 116912809 MODEL JAAIVD010000025;XM_032916978;XM_032916985 XP_032772869;XP_032772876 zinc finger protein 41 homolog protein-coding 626119455 LOC116908379 small nucleolar RNA SNORA48 8 69063162 69063307 + 116908379 MODEL JAAIVD010000027;XR_004388926 snorna 626119458 LOC116900151 high mobility group protein B1-like 5 21141989 21143321 + 116900151 MODEL JAAIVD010000023 pseudo 626119459 Tekt5 tektin 5 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 9 11961434 11997901 + 22301074;30032202 116909279 MODEL JAAIVD010000002;XM_032912814 XP_032768705 tektin-5 protein-coding 626119470 LOC116892041 60S ribosomal protein L6-like 2 142439598 142441759 + 116892041 MODEL JAAIVD010000001 pseudo 626119471 LOC116888022 endogenous retrovirus group K member 5 Gag polyprotein-like X 80852518 80855363 - 116888022 MODEL JAAIVD010000014 pseudo 626119472 Gnpat glyceronephosphate O-acyltransferase ENCODES a protein that exhibits catalytic activity (ortholog); glycerone-phosphate O-acyltransferase activity (ortholog); INVOLVED IN cerebellum morphogenesis (ortholog); ether lipid biosynthetic process (ortholog); membrane organization (ortholog); PARTICIPATES IN plasmalogen biosynthetic pathway; plasmalogen metabolic pathway; ASSOCIATED WITH disease of mental health (ortholog); genetic disease (ortholog); prostate cancer (ortholog); FOUND IN cell junction (ortholog); peroxisomal membrane (ortholog); peroxisome (ortholog) 17 44375354 44401453 + 22301074;30032202 116886026 MODEL JAAIVD010000011;XM_032887318 XP_032743209 dihydroxyacetone phosphate acyltransferase protein-coding 626119492 Vwa5b2 von Willebrand factor A domain containing 5B2 4 5414799 5430093 + 116898695 MODEL JAAIVD010000003;XM_032899956 XP_032755847 von Willebrand factor A domain-containing protein 5B2 protein-coding 626119516 LOC116884898 protein crumbs homolog 1-like 15 2715448 2717615 - 116884898 MODEL JAAIVD010000010 pseudo 626119517 Ckap5 cytoskeleton associated protein 5 ENCODES a protein that exhibits microtubule binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); centrosome cycle (ortholog); cytoplasmic translation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); Chromosomal Instability (ortholog); prostate cancer (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 5 65672388 65767042 + 30032202 116901622 MODEL JAAIVD010000023;XM_032903673;XM_032903674;XM_032903675;XM_032903676;XM_032903677 XP_032759564;XP_032759565;XP_032759566;XP_032759567;XP_032759568 cytoskeleton-associated protein 5 protein-coding 626119575 LOC116902546 small nucleolar RNA SNORA55 5 62851579 62851710 - 116902546 MODEL JAAIVD010000023;XR_004388147 snorna 626119578 Clcn6 chloride voltage-gated channel 6 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN chloride transport (ortholog); response to mechanical stimulus (ortholog); ASSOCIATED WITH coronary artery disease (ortholog); Developmental Disabilities (ortholog); Neuronal Ceroid Lipofuscinosis 15 (ortholog) 1 12739863 12772291 + 22301074;30032202 116890262 MODEL JAAIVD010000025;XM_032890984 XP_032746875 chloride transport protein 6 protein-coding 626119606 Erg28 ergosterol biosynthesis 28 homolog ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN transport vesicle (ortholog) 7 99921057 99929770 - 22301074;30032202 116905301 MODEL JAAIVD010000026;XM_032908183;XM_032908184 XP_032764074;XP_032764075 probable ergosterol biosynthetic protein 28 protein-coding 626119619 Rmdn3 regulator of microtubule dynamics 3 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); FOUND IN glutamatergic synapse (ortholog); intercellular bridge (ortholog); mitochondrial outer membrane (ortholog) 5 97316216 97336310 - 30032202 116901797 MODEL JAAIVD010000023;XM_032903951 XP_032759842 regulator of microtubule dynamics protein 3 protein-coding 626119636 LOC116898015 U1 small nuclear ribonucleoprotein C-like 4 75589709 75590203 - 116898015 MODEL JAAIVD010000003 pseudo 626119637 LOC116886149 membrane-associated progesterone receptor component 1-like 17 24662312 24664175 + 30032202 116886149 MODEL JAAIVD010000011;XM_032887508;XM_032887509 XP_032743399;XP_032743400 protein-coding 626119645 Cmtm5 CKLF like MARVEL transmembrane domain containing 5 INVOLVED IN negative regulation of myoblast differentiation (ortholog) 12 70051569 70054304 - 22301074 116913220 MODEL JAAIVD010000007;XM_032917395 XP_032773286 CKLF-like MARVEL transmembrane domain-containing protein 5 protein-coding 626119652 LOC116898591 keratin-associated protein 9-1-like 4 177081294 177082007 - 116898591 MODEL JAAIVD010000003;XM_032899787 XP_032755678 protein-coding 626119655 Ogn osteoglycin INVOLVED IN negative regulation of smooth muscle cell proliferation (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 14 68587302 68606126 + 22301074 116915223 MODEL JAAIVD010000009;XM_032919612 XP_032775503 mimecan protein-coding 626119666 C17H4orf51 chromosome 17 C4orf51 homolog 17 20861732 20891287 + 116886582 MODEL JAAIVD010000011;XM_032888108 XP_032743999 uncharacterized protein C4orf51 homolog protein-coding 626119676 Ccndbp1 cyclin D1 binding protein 1 ASSOCIATED WITH Experimental Liver Neoplasms (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 99141611 99152141 + 30032202 116901850 MODEL JAAIVD010000023;XM_032904041 XP_032759932 cyclin-D1-binding protein 1 protein-coding 626119691 LOC116908107 small nuclear ribonucleoprotein-associated protein N-like 1 169829752 169830457 - 116908107 MODEL JAAIVD010000025 pseudo 626119692 LOC116894880 U6 spliceosomal RNA 2 7051895 7052002 - 116894880 MODEL JAAIVD010000001;XR_004387091 snrna 626119695 Gadd45gip1 GADD45G interacting protein 1 PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 17 15457055 15459150 - 22301074;30032202 116886217 MODEL JAAIVD010000011;XM_032887609 XP_032743500 growth arrest and DNA damage-inducible proteins-interacting protein 1 protein-coding 626119701 Mrpl34 mitochondrial ribosomal protein L34 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 13 13521590 13523401 - 22301074;30032202 116915103 MODEL JAAIVD010000008;XM_032919533 XP_032775424 39S ribosomal protein L34, mitochondrial protein-coding 626119707 LOC116885229 cytochrome c oxidase assembly protein COX14 INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 10 (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 272527217 272527671 + 30032202 116885229 MODEL JAAIVD010000025;XM_032886470 XP_032742361 protein-coding 626119712 Gfod1 Gfo/Idh/MocA-like oxidoreductase domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH coronary artery disease (ortholog) 14 62215488 62314931 - 22301074 116884014 MODEL JAAIVD010000009;XM_032885253 XP_032741144 glucose-fructose oxidoreductase domain containing 1;glucose-fructose oxidoreductase domain-containing protein 1 protein-coding 626119718 LOC116886621 carboxylesterase 1E-like 17 14927586 14986914 + 30032202 116886621 MODEL JAAIVD010000011;XM_032888128 XP_032744019 protein-coding 626119740 Rpl24 ribosomal protein L24 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); exit from mitosis (ortholog); optic nerve development (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); optic atrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 4 40096465 40101875 + 30032202 116898897 MODEL JAAIVD010000003;XM_032900296 XP_032756187 60S ribosomal protein L24 protein-coding 626119750 Trnap-agg transfer RNA proline (anticodon AGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 103094800 103094871 - 116897698 MODEL JAAIVD010000012 trna 626119751 Exoc3l4 exocyst complex component 3 like 4 7 128991444 129005674 + 22301074;30032202 116905488 MODEL JAAIVD010000026;XM_032908487 XP_032764378 exocyst complex component 3-like protein 4 protein-coding 626119767 LOC116902489 U6 spliceosomal RNA 5 8077347 8077448 - 116902489 MODEL JAAIVD010000023;XR_004388105 snrna 626119770 LOC116883526 uncharacterized LOC116883526 14 41876351 41934940 + 22301074;30032202 116883526 MODEL JAAIVD010000009;XM_032884699 XP_032740590 uncharacterized protein LOC116883526 protein-coding 626119778 LOC116906910 uncharacterized LOC116906910 8 67463806 67464900 + 116906910 MODEL JAAIVD010000027;XR_004388780 ncrna 626119782 Nhlrc3 NHL repeat containing 3 3 100983510 100997929 + 22301074;30032202 116896879 MODEL JAAIVD010000012;XM_032898425;XM_032898426 XP_032754316;XP_032754317 NHL repeat-containing protein 3 protein-coding 626119797 Ptger2 prostaglandin E receptor 2 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to prostaglandin E stimulus (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma, nasal polyps, and aspirin intolerance (ortholog); endometriosis (ortholog); FOUND IN plasma membrane (ortholog) 12 77997895 78009801 - 22301074;30032202 116913510 MODEL JAAIVD010000007;XM_032917715 XP_032773606 prostaglandin E2 receptor EP2 subtype protein-coding 626119803 Atp8a2 ATPase phospholipid transporting 8A2 ENCODES a protein that exhibits aminophospholipid flippase activity (ortholog); INVOLVED IN axonogenesis (ortholog); detection of light stimulus involved in visual perception (ortholog); determination of adult lifespan (ortholog); ASSOCIATED WITH cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome (ortholog); cerebellar ataxia, impaired intellectual development, and dysequilibrium syndrome 4 (ortholog); epilepsy (ortholog); FOUND IN endosome (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 12 64242582 64735379 + 22301074;30032202 116913325 MODEL JAAIVD010000007;XM_032917468 XP_032773359 phospholipid-transporting ATPase IB protein-coding 626119844 LOC116883867 uncharacterized LOC116883867 14 25489609 25494910 + 22301074 116883867 MODEL JAAIVD010000009;XM_032885133 XP_032741024 uncharacterized protein LOC116883867 protein-coding 626119849 Hapln3 hyaluronan and proteoglycan link protein 3 2 121116211 121133181 + 22301074 116891948 MODEL JAAIVD010000001;XM_032893389 XP_032749280 protein-coding 626119858 Cfh complement factor H ENCODES a protein that exhibits complement component C3b binding (ortholog); heparan sulfate proteoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN activation of membrane attack complex (ortholog); angiogenesis (ortholog); ATP metabolic process (ortholog); ASSOCIATED WITH age related macular degeneration 4 (ortholog); amphetamine abuse (ortholog); anterior uveitis (ortholog); FOUND IN axon (ortholog); external side of plasma membrane (ortholog); extracellular region (ortholog) 10 20205390 20304398 - 116911308 MODEL JAAIVD010000005;XM_032915223 XP_032771114 protein-coding 626119883 LOC116897510 small nucleolar RNA SNORA2/SNORA34 family 3 65236807 65236942 - 116897510 MODEL JAAIVD010000012;XR_004387530 snorna 626119886 Slitrk6 SLIT and NTRK like family member 6 INVOLVED IN adult locomotory behavior (ortholog); auditory behavior (ortholog); auditory receptor cell morphogenesis (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN cell periphery (ortholog); cell surface (ortholog); plasma membrane (ortholog) 12 14525927 14529654 + 22301074;30032202 116913806 MODEL JAAIVD010000007;XM_032918114 XP_032774005 SLIT and NTRK-like protein 6 protein-coding 626119891 Cdc42ep2 CDC42 effector protein 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); opioid peptide activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); positive regulation of actin filament polymerization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 2 1772425 1781146 + 116890689 MODEL JAAIVD010000001;XM_032891102;XM_032891104;XR_004386778 XP_032746993;XP_032746995 protein-coding 626119903 LOC116914578 defensin alpha-like protein 1 13 64790981 64791987 + 22301074;30032202 116914578 MODEL JAAIVD010000008;XM_032918937 XP_032774828 protein-coding 626119909 Bola1 bolA family member 1 FOUND IN iron-sulfur cluster assembly complex (ortholog); mitochondrion (ortholog) 3 61074078 61086070 + 30032202 116896519 MODEL JAAIVD010000012;XM_032897701;XM_032897702 XP_032753592;XP_032753593 bolA-like protein 1 protein-coding 626119919 Pla2g2f phospholipase A2 group IIF ENCODES a protein that exhibits calcium-dependent phospholipase A2 activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN arachidonate metabolic process (ortholog); negative regulation of T cell proliferation (ortholog); phosphatidylcholine acyl-chain remodeling (ortholog) 1 19450333 19456575 + 22301074;30032202 116886569 MODEL JAAIVD010000025;XM_032888094 XP_032743985 group IIF secretory phospholipase A2 protein-coding 626119928 LOC116893915 transmembrane protein 180-like 2 80785612 80811169 - 116893915 MODEL JAAIVD010000001;XM_032895638 XP_032751529 protein-coding 626119936 Maneal mannosidase endo-alpha like 1 33433968 33441006 + 30032202 116896855 MODEL JAAIVD010000025;XM_032898368;XM_032898377 XP_032754259;XP_032754268 glycoprotein endo-alpha-1,2-mannosidase-like protein protein-coding 626119946 LOC116894127 olfactory receptor 52E4-like 2 103904481 103910034 + 22301074 116894127 MODEL JAAIVD010000001;XM_032895845;XM_032895846 XP_032751736;XP_032751737 protein-coding 626119952 Rbbp7 RB binding protein 7, chromatin remodeling factor ENCODES a protein that exhibits histone binding (ortholog); RNA binding (ortholog); INVOLVED IN cellular heat acclimation (ortholog); chromatin remodeling (ortholog); negative regulation of cell growth (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; Hedgehog signaling pathway; ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH X-linked spermatogenic failure 9 (ortholog); FOUND IN ATPase complex (ortholog); chromosome, telomeric region (ortholog); cytosol (ortholog) X 23593303 23608584 - 30032202 116888492 MODEL JAAIVD010000014;XM_032889764;XM_032889765;XM_032889767;XM_032889768 XP_032745655;XP_032745656;XP_032745658;XP_032745659 histone-binding protein RBBP7 protein-coding 626119978 LOC116912991 small nucleolar RNA SNORA17 11 26532647 26532772 + 116912991 MODEL JAAIVD010000006;XR_004389554 snorna 626119981 LOC116904419 catechol O-methyltransferase domain-containing protein 1-like 6 105676767 105677515 - 116904419 MODEL JAAIVD010000024 pseudo 626119982 LOC116889485 small nucleolar RNA SNORA29 X 41541965 41542100 - 116889485 MODEL JAAIVD010000014;XR_004386436 snorna 626119985 LOC116884712 uncharacterized LOC116884712 15 4725559 4732152 + 116884712 MODEL JAAIVD010000010;XR_004385889 ncrna 626119990 LOC116900876 olfactory receptor 5W2-like 5 69052126 69052847 - 116900876 MODEL JAAIVD010000023 pseudo 626119991 LOC116903793 killer cell lectin-like receptor 5 6 17488312 17505102 - 116903793 MODEL JAAIVD010000024;XM_032906487 XP_032762378 protein-coding 626120001 Oxld1 oxidoreductase like domain containing 1 FOUND IN mitochondrion (ortholog) 9 63567548 63568938 + 30032202 116908607 MODEL JAAIVD010000002;XM_032911830;XM_032911831 XP_032767721;XP_032767722 oxidoreductase-like domain-containing protein 1 protein-coding 626120010 LOC116887724 small nucleolar RNA SNORA17 18 29031519 29031649 - 116887724 MODEL JAAIVD010000013;XR_004386238 snorna 626120013 Pcyt1a phosphate cytidylyltransferase 1A, choline ENCODES a protein that exhibits calmodulin binding (ortholog); choline-phosphate cytidylyltransferase activity (ortholog); identical protein binding (ortholog); INVOLVED IN B cell proliferation (ortholog); CDP-choline pathway (ortholog); isotype switching (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; lamivudine pharmacokinetics pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Congenital Generalized Lipodystrophy Type 5 (ortholog); fundus dystrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glycogen granule (ortholog) 4 17242011 17283598 + 30032202 116898776 MODEL JAAIVD010000003;XM_032900112;XM_032900113 XP_032756003;XP_032756004 choline-phosphate cytidylyltransferase A;phosphate cytidylyltransferase 1, choline, alpha protein-coding 626120029 LOC116891686 60S ribosomal protein L27a-like 2 12042828 12043277 - 22301074;30032202 116891686 MODEL JAAIVD010000001;XM_032892949 XP_032748840 protein-coding 626120032 LOC116912398 uncharacterized LOC116912398 11 17365339 17365645 + 116912398 MODEL JAAIVD010000006;XR_004389456 ncrna 626120036 Atp5po ATP synthase peripheral stalk subunit OSCP ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); estradiol binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to cytokine stimulus (ortholog); proton motive force-driven mitochondrial ATP synthesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); clear cell renal cell carcinoma (ortholog); epilepsy (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 4 52674285 52680611 + 22301074;30032202 116898984 MODEL JAAIVD010000003;XM_032900411 XP_032756302 ATP synthase subunit O, mitochondrial protein-coding 626120047 LOC116914829 uncharacterized LOC116914829 13 43146456 43172401 + 116914829 MODEL JAAIVD010000008;XR_004389773;XR_004389774 ncrna 626120055 LOC116898458 heterogeneous nuclear ribonucleoprotein C-like 4 100334358 100335199 + 116898458 MODEL JAAIVD010000003 pseudo 626120056 LOC116888157 activated RNA polymerase II transcriptional coactivator p15-like X 113471763 113482700 - 116888157 MODEL JAAIVD010000014 pseudo 626120057 Shisa4 shisa family member 4 10 346322 350544 + 116911408 MODEL JAAIVD010000005;XM_032915369;XM_032915370 XP_032771260;XP_032771261 protein shisa-4 protein-coding 626120069 LOC116909137 olfactory receptor 1468-like 9 92734945 92735880 + 22301074;30032202 116909137 MODEL JAAIVD010000002;XM_032912624 XP_032768515 protein-coding 626120072 Aph1a aph-1A gamma-secretase subunit ENCODES a protein that exhibits endopeptidase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN amyloid precursor protein catabolic process (ortholog); amyloid precursor protein metabolic process (ortholog); amyloid-beta formation (ortholog); PARTICIPATES IN Notch signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); gamma-secretase complex (ortholog) 3 61390743 61394307 - 22301074;30032202 116896530 MODEL JAAIVD010000012;XM_032897711 XP_032753602 aph-1 homolog A, gamma-secretase subunit;gamma-secretase subunit APH-1A protein-coding 626120083 Paqr8 progestin and adipoQ receptor family member 8 FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 4 98306634 98309755 + 30032202 116899243 MODEL JAAIVD010000003;XM_032900848 XP_032756739 membrane progestin receptor beta protein-coding 626120088 LOC116888240 gem-associated protein 8-like X 71515183 71515894 + 116888240 MODEL JAAIVD010000014 pseudo 626120089 Pak6 p21 (RAC1) activated kinase 6 INVOLVED IN learning (ortholog); locomotory behavior (ortholog); memory (ortholog); ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cell junction (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 5 96817201 96852062 + 22301074;30032202 116901782 MODEL JAAIVD010000023;XM_032903925;XM_032903926 XP_032759816;XP_032759817 serine/threonine-protein kinase PAK 6 protein-coding 626120107 Prss8 serine protease 8 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); INVOLVED IN positive regulation of sodium ion transmembrane transport (ortholog); positive regulation of sodium ion transport (ortholog); response to mineralocorticoid (ortholog); ASSOCIATED WITH alopecia (ortholog); autosomal recessive congenital ichthyosis 4B (ortholog); breast carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); membrane raft (ortholog) 2 73974678 73979493 + 22301074;30032202 116891449 MODEL JAAIVD010000001;XM_032892516 XP_032748407 prostasin protein-coding 626120117 LOC116896940 heterogeneous nuclear ribonucleoprotein A3-like 3 119217283 119218325 + 116896940 MODEL JAAIVD010000012 pseudo 626120118 Gnptg N-acetylglucosamine-1-phosphate transferase subunit gamma ENCODES a protein that exhibits protein homodimerization activity (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase activity (ortholog); INVOLVED IN carbohydrate phosphorylation (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); UDP-N-acetylglucosamine-lysosomal-enzyme N-acetylglucosaminephosphotransferase complex (ortholog) 9 2500508 2506406 - 30032202 116910553 MODEL JAAIVD010000002;XM_032914461 XP_032770352 N-acetylglucosamine-1-phosphotransferase subunit gamma protein-coding 626120133 LOC116901531 uncharacterized LOC116901531 1 123245005 123268560 + 116901531 MODEL JAAIVD010000025 pseudo 626120134 Elovl3 ELOVL fatty acid elongase 3 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN fatty acid elongation, monounsaturated fatty acid (ortholog); fatty acid elongation, polyunsaturated fatty acid (ortholog); fatty acid elongation, saturated fatty acid (ortholog); FOUND IN endoplasmic reticulum (ortholog) 2 45598044 45601871 + 22301074;30032202 116893812 MODEL JAAIVD010000001;XM_032895527 XP_032751418 elongation of very long chain fatty acids protein 3 protein-coding 626120142 LOC116898487 60 kDa heat shock protein, mitochondrial-like 4 120838399 120845304 + 116898487 MODEL JAAIVD010000003 pseudo 626120143 LOC116895905 60S ribosomal protein L13-like 3 120587896 120588500 + 116895905 MODEL JAAIVD010000012 pseudo 626120144 LOC116893789 cytochrome P450 26C1 ENCODES a protein that exhibits retinoic acid 4-hydroxylase activity (ortholog); retinoic acid binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); central nervous system development (ortholog); neural crest cell development (ortholog); PARTICIPATES IN retinoic acid metabolic pathway; ASSOCIATED WITH Focal Facial Dermal Dysplasia (ortholog); Focal Facial Dermal Dysplasia 4 (ortholog); syndromic microphthalmia 5 (ortholog) 2 36068816 36076398 - 22301074;30032202 116893789 MODEL JAAIVD010000001;XM_032895493 XP_032751384 protein-coding 626120154 LOC116893045 60S ribosomal protein L15-like 2 229892272 229892850 + 116893045 MODEL JAAIVD010000001 pseudo 626120155 LOC116886906 calcium homeostasis modulator protein 6-like 18 24160974 24161358 - 30032202 116886906 MODEL JAAIVD010000013;XM_032888371 XP_032744262 protein-coding 626120160 LOC116908287 olfactory receptor 147-like 8 31786579 31787496 + 116908287 MODEL JAAIVD010000027 pseudo 626120161 LOC116914099 small nucleolar RNA SNORD44 12 84143957 84144017 - 116914099 MODEL JAAIVD010000007;XR_004389667 snorna 626120164 LOC116887254 uncharacterized LOC116887254 18 19090680 19108794 + 116887254 MODEL JAAIVD010000013;XR_004386206 ncrna 626120169 Lhx2 LIM homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure formation involved in morphogenesis (ortholog); axon extension (ortholog); axon guidance (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN nucleus (ortholog) 5 16117077 16147295 + 22301074;30032202 116901364 MODEL JAAIVD010000023;XM_032903222;XM_032903223;XM_032903224 XP_032759113;XP_032759114;XP_032759115 LIM/homeobox protein Lhx2 protein-coding 626120185 Adamts17 ADAM metallopeptidase with thrombospondin type 1 motif 17 ASSOCIATED WITH anterior segment dysgenesis (ortholog); genetic disease (ortholog); Liver Neoplasms (ortholog) 2 133187591 133502696 - 22301074;30032202 116891986 MODEL JAAIVD010000001;XM_032893438 XP_032749329 A disintegrin and metalloproteinase with thrombospondin motifs 17 protein-coding 626120212 Rnf146 ring finger protein 146 ENCODES a protein that exhibits enzyme binding (ortholog); poly-ADP-D-ribose binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); osteochondrodysplasia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 2 203414618 203432684 + 22301074;30032202 116892912 MODEL JAAIVD010000001;XM_032894834;XM_032894835 XP_032750725;XP_032750726 E3 ubiquitin-protein ligase RNF146 protein-coding 626120223 Phyhip phytanoyl-CoA 2-hydroxylase interacting protein ENCODES a protein that exhibits protein tyrosine kinase binding (ortholog); INVOLVED IN intracellular protein localization (ortholog); FOUND IN cytoplasm (ortholog) 12 53882723 53893954 - 22301074;30032202 116913438 MODEL JAAIVD010000007;XM_032917638 XP_032773529 phytanoyl-CoA hydroxylase-interacting protein protein-coding 626120232 Sctr secretin receptor ENCODES a protein that exhibits peptide binding (ortholog); peptide hormone binding (ortholog); secretin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); diet induced thermogenesis (ortholog); G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN cytoplasmic microtubule (ortholog) 10 12578342 12633912 + 22301074;30032202 116911321 MODEL JAAIVD010000005;XM_032915237;XM_032915238;XM_032915239 XP_032771128;XP_032771129;XP_032771130 protein-coding 626120255 LOC116909493 TBC1 domain family member 30-like 1 199275047 199360117 - 30032202 116909493 MODEL JAAIVD010000025;XM_032913095 XP_032768986 protein-coding 626120272 LOC116888019 T-complex protein 1 subunit epsilon-like X 80675861 80677137 - 116888019 MODEL JAAIVD010000014 pseudo 626120273 LOC116892818 parkin coregulated gene protein homolog 2 189218907 189410888 - 30032202 116892818 MODEL JAAIVD010000001;XM_032894702 XP_032750593 protein-coding 626120280 Rap1gap RAP1 GTPase activating protein ENCODES a protein that exhibits GTPase activator activity (ortholog); protein homodimerization activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cellular response to glial cell derived neurotrophic factor (ortholog); establishment of localization in cell (ortholog); negative regulation of GTP binding (ortholog); ASSOCIATED WITH acute promyelocytic leukemia (ortholog); bipolar disorder (ortholog); Disease Progression (ortholog); FOUND IN axon (ortholog); cytosol (ortholog); dendrite (ortholog) 1 20494172 20515317 - 22301074;30032202 116894132 MODEL JAAIVD010000025;XM_032895854 XP_032751745 rap1 GTPase-activating protein 1 protein-coding 626120307 LOC116894909 U7 small nuclear RNA 2 143502683 143502744 - 116894909 MODEL JAAIVD010000001;XR_004387111 snrna 626120310 LOC116897629 U6atac minor spliceosomal RNA 3 176467687 176467812 + 116897629 MODEL JAAIVD010000012;XR_004387609 snrna 626120313 Mtf2 metal response element binding transcription factor 2 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription corepressor binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); epigenetic regulation of gene expression (ortholog); segment specification (ortholog); FOUND IN cytoplasm (ortholog); ESC/E(Z) complex (ortholog); nucleoplasm (ortholog) 11 17868515 17911671 + 30032202 116912097 MODEL JAAIVD010000006;XM_032915989;XM_032915990 XP_032771880;XP_032771881 metal-response element-binding transcription factor 2 protein-coding 626120335 LOC116888770 ribosomal L1 domain-containing protein 1-like X 7854594 7855946 - 116888770 MODEL JAAIVD010000014 pseudo 626120336 Specc1l sperm antigen with calponin homology and coiled-coil domains 1 like ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adherens junction organization (ortholog); anterior neural tube closure (ortholog); ASSOCIATED WITH cleft palate (ortholog); oblique facial clefting 1 (ortholog); prostate cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 18 12125177 12232492 - 22301074;30032202 116887680 MODEL JAAIVD010000013;XM_032889276 XP_032745167 cytospin-A protein-coding 626120356 LOC116899558 60S ribosomal protein L35-like 4 154832543 154832911 + 116899558 MODEL JAAIVD010000003 pseudo 626120357 LOC116903783 serine/arginine-rich splicing factor 7-like 6 88037314 88038239 - 116903783 MODEL JAAIVD010000024 pseudo 626120358 Bop1 BOP1 ribosomal biogenesis factor ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); INVOLVED IN cell population proliferation (ortholog); cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); maturation of 5.8S rRNA (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 248785215 248809059 - 22301074;30032202 116913146 MODEL JAAIVD010000025;XM_032917356 XP_032773247 ribosome biogenesis protein BOP1 protein-coding 626120378 LOC116906168 nucleoporin GLE1-like 7 101857679 101859893 - 22301074;30032202 116906168 MODEL JAAIVD010000026;XM_032909145 XP_032765036 protein-coding 626120382 LOC116894413 keratin-associated protein 15-1 2 158598913 158599725 + 116894413 MODEL JAAIVD010000001;XM_032896117 XP_032752008 protein-coding 626120387 LOC116895528 late cornified envelope protein 3D-like 3 120302122 120302417 + 116895528 MODEL JAAIVD010000012 pseudo 626120388 Clec4e C-type lectin domain family 4 member E ENCODES a protein that exhibits calcium ion binding (ortholog); glycolipid binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN antifungal innate immune response (ortholog); defense response to bacterium (ortholog); Fc-gamma receptor signaling pathway (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); lung disease (ortholog); FOUND IN membrane (ortholog); phagocytic vesicle membrane (ortholog); plasma membrane (ortholog) 6 24065388 24071072 - 30032202 116904594 MODEL JAAIVD010000024;XM_032907389 XP_032763280 protein-coding 626120398 Nkrf NFKB repressing factor ENCODES a protein that exhibits ATPase activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) X 103069154 103085589 - 30032202 116889353 MODEL JAAIVD010000014;XM_032890464 XP_032746355 NF-kappa-B-repressing factor protein-coding 626120405 LOC116890630 U2 spliceosomal RNA 1 112117214 112117340 + 116890630 MODEL JAAIVD010000025 pseudo 626120406 Slc66a3 solute carrier family 66 member 3 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Liver Neoplasms (ortholog) 7 36799110 36810914 - 116904896 MODEL JAAIVD010000026;XM_032907503;XM_032907504 XP_032763394;XP_032763395 protein-coding 626120420 LOC116894548 ret finger protein-like 4A 2 177683565 177690075 - 22301074 116894548 MODEL JAAIVD010000001;XM_032896257 XP_032752148 protein-coding 626120427 Kif11 kinesin family member 11 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN mitotic centrosome separation (ortholog); mitotic spindle assembly (ortholog); regulation of mitotic centrosome separation (ortholog); ASSOCIATED WITH Aneuploidy (ortholog); autosomal dominant intellectual developmental disorder 21 (ortholog); Chromosomal Instability (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); microtubule (ortholog) 2 36359790 36407496 - 22301074;30032202 116891129 MODEL JAAIVD010000001;XM_032891852 XP_032747743 kinesin-like protein KIF11 protein-coding 626120453 LOC116906377 small nucleolar RNA SNORD113/SNORD114 family 7 127254635 127254709 + 116906377 MODEL JAAIVD010000026;XR_004388646 snorna 626120456 Tdrkh tudor and KH domain containing INVOLVED IN fertilization (ortholog); male meiotic nuclear division (ortholog); piRNA processing (ortholog); ASSOCIATED WITH azoospermia (ortholog); spinal muscular atrophy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); pi-body (ortholog) 3 62741185 62763551 - 30032202 116896589 MODEL JAAIVD010000012;XM_032897829;XM_032897830 XP_032753720;XP_032753721 tudor and KH domain-containing protein protein-coding 626120480 LOC116908113 zinc finger protein 26 8 16701583 16720102 + 30032202 116908113 MODEL JAAIVD010000027;XM_032911394 XP_032767285 protein-coding 626120493 LOC116910749 U2 spliceosomal RNA 9 87411456 87411646 - 116910749 MODEL JAAIVD010000002;XR_004389262 snrna 626120496 Micu2 mitochondrial calcium uptake 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); calcium ion binding (ortholog); calcium ion sensor activity (ortholog); INVOLVED IN calcium import into the mitochondrion (ortholog); cellular response to calcium ion (ortholog); mitochondrial calcium ion homeostasis (ortholog); FOUND IN calcium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog) 12 66833212 66912030 + 22301074;30032202 116914064 MODEL JAAIVD010000007;XM_032918366;XM_032918367 XP_032774257;XP_032774258 calcium uptake protein 2, mitochondrial protein-coding 626120513 LOC116912333 uncharacterized LOC116912333 11 20985147 20988263 + 116912333 MODEL JAAIVD010000006;XR_004389448 ncrna 626120517 LOC116900428 olfactory receptor 4C15-like 5 70605610 70606545 - 22301074 116900428 MODEL JAAIVD010000023;XM_032902171 XP_032758062 protein-coding 626120520 Taf10 TATA-box binding protein associated factor 10 ENCODES a protein that exhibits DNA binding (ortholog); enzyme binding (ortholog); histone acetyltransferase activity (ortholog); INVOLVED IN allantois development (ortholog); apoptotic process (ortholog); DNA-templated transcription initiation (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); hypertrophic cardiomyopathy 1 (ortholog); FOUND IN cytoplasm (ortholog); male germ cell nucleus (ortholog); nucleoplasm (ortholog) 2 104584594 104585911 - 22301074;30032202 116891826 MODEL JAAIVD010000001;XM_032893191;XM_032893192 XP_032749082;XP_032749083 transcription initiation factor TFIID subunit 10 protein-coding 626120533 LOC116883777 peptidyl-prolyl cis-trans isomerase D-like 14 41676359 41677686 + 22301074 116883777 MODEL JAAIVD010000009;XM_032885021 XP_032740912 protein-coding 626120538 Pkmyt1 protein kinase, membrane associated tyrosine/threonine 1 ENCODES a protein that exhibits kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); melanoma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleolus (ortholog) 9 1024926 1035285 + 22301074;30032202 116908994 MODEL JAAIVD010000002;XM_032912463;XR_004389044 XP_032768354 membrane-associated tyrosine- and threonine-specific cdc2-inhibitory kinase protein-coding 626120553 Smox spermine oxidase ENCODES a protein that exhibits polyamine oxidase activity (ortholog); INVOLVED IN polyamine catabolic process (ortholog); spermine catabolic process (ortholog); PARTICIPATES IN polyamine metabolic pathway; ASSOCIATED WITH middle cerebral artery infarction (ortholog); Stroke (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 5 111223744 111258033 + 30032202 116901993 MODEL JAAIVD010000023;XM_032904251;XM_032904252 XP_032760142;XP_032760143 protein-coding 626120568 LOC116914097 5S ribosomal RNA 12 75263784 75263902 + 116914097 MODEL JAAIVD010000007 pseudo 626120569 LOC116908417 small nucleolar RNA SNORA17 8 104640518 104640640 - 116908417 MODEL JAAIVD010000027 pseudo 626120570 Myom3 myomesin 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); ASSOCIATED WITH Contracture (ortholog); FOUND IN M band (ortholog) 1 22413679 22461269 - 22301074 116886684 MODEL JAAIVD010000025;XM_032888180 XP_032744071 myomesin-3 protein-coding 626120609 LOC116910085 formin-like protein 16 9 96494068 96497042 + 116910085 MODEL JAAIVD010000002;XM_032913901 XP_032769792 protein-coding 626120614 LOC116894205 olfactory receptor 498-like 2 106382522 106383466 + 22301074;30032202 116894205 MODEL JAAIVD010000001;XM_032895918 XP_032751809 protein-coding 626120617 Mmp21 matrix metallopeptidase 21 INVOLVED IN coronary vasculature development (ortholog); determination of heart left/right asymmetry (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH fibrous histiocytoma (ortholog); genetic disease (ortholog); skin disease (ortholog) 2 68196400 68202443 + 22301074;30032202 116893875 MODEL JAAIVD010000001;XM_032895598 XP_032751489 matrix metalloproteinase-21 protein-coding 626120628 Macrod1 mono-ADP ribosylhydrolase 1 ENCODES a protein that exhibits ADP-ribosylglutamate hydrolase activity (ortholog); deacetylase activity (ortholog); hydrolase activity, acting on glycosyl bonds (ortholog); INVOLVED IN DNA damage response (ortholog); peptidyl-glutamate ADP-deribosylation (ortholog); protein de-ADP-ribosylation (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH neuropathy (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 595362 739592 - 30032202 116894804 MODEL JAAIVD010000001;XM_032896464;XM_032896465;XM_032896466;XM_032896467 XP_032752355;XP_032752356;XP_032752357;XP_032752358 ADP-ribose glycohydrolase MACROD1 protein-coding 626120650 Pcyt2 phosphate cytidylyltransferase 2, ethanolamine ENCODES a protein that exhibits ethanolamine-phosphate cytidylyltransferase activity (ortholog); INVOLVED IN phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN lamivudine pharmacokinetics pathway; ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 82 (ortholog) 9 63404822 63412226 + 30032202 116909262 MODEL JAAIVD010000002;XM_032912785;XM_032912786;XM_032912788 XP_032768676;XP_032768677;XP_032768679 ethanolamine-phosphate cytidylyltransferase protein-coding 626120674 Wdr7 WD repeat domain 7 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); FOUND IN synaptic vesicle (ortholog) 15 67309915 67581849 - 22301074;30032202 116884455 MODEL JAAIVD010000010;XM_032885554 XP_032741445 WD repeat-containing protein 7 protein-coding 626120706 LOC116897649 U2 spliceosomal RNA 3 78098854 78098968 + 116897649 MODEL JAAIVD010000012 pseudo 626120707 LOC116913712 U3 small nucleolar RNA-associated protein 4 homolog 12 78136531 78139334 + 116913712 MODEL JAAIVD010000007 pseudo 626120708 Pou5f1 POU class 5 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blastocyst growth (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); Carcinogenesis (ortholog); congenital heart disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 18 8715922 8720452 + 22301074;30032202 116887452 MODEL JAAIVD010000013;XM_032889059 XP_032744950 POU domain, class 5, transcription factor 1 protein-coding 626120717 Dhx30 DExH-box helicase 30 ENCODES a protein that exhibits chromatin binding (ortholog); double-stranded RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN central nervous system development (ortholog); mitochondrial large ribosomal subunit assembly (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 8 100685556 100718517 - 22301074;30032202 116907648 MODEL JAAIVD010000027;XM_032910719;XM_032910720;XM_032910721;XM_032910722;XM_032910723;XM_032910724 XP_032766610;XP_032766611;XP_032766612;XP_032766613;XP_032766614;XP_032766615 ATP-dependent RNA helicase DHX30 protein-coding 626120756 Dennd6a DENN domain containing 6A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN positive regulation of cell-cell adhesion mediated by cadherin (ortholog); FOUND IN cytoplasm (ortholog); recycling endosome (ortholog) 13 2384364 2429157 + 30032202 116914809 MODEL JAAIVD010000008;XM_032919264 XP_032775155 protein DENND6A protein-coding 626120780 LOC116900088 beta-lactoglobulin-1A/1C-like 5 11331534 11334833 - 30032202 116900088 MODEL JAAIVD010000023;XM_032901869 XP_032757760 protein-coding 626120790 LOC116889952 olfactory receptor 6C3-like 1 161626506 161627401 - 116889952 MODEL JAAIVD010000025 pseudo 626120791 LOC116888149 zinc finger protein 280C-like X 109842053 109862997 + 30032202 116888149 MODEL JAAIVD010000014;XM_032889478 XP_032745369 protein-coding 626120802 Catsper4 cation channel sperm associated 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); flagellated sperm motility (ortholog); sodium ion transport (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); sperm principal piece (ortholog) 1 24017458 24033969 + 22301074;30032202 116886768 MODEL JAAIVD010000025;XM_032888231 XP_032744122 cation channel sperm-associated protein 4 protein-coding 626120816 Retreg3 reticulophagy regulator family member 3 ENCODES a protein that exhibits endoplasmic reticulum-autophagosome adaptor activity (ortholog); INVOLVED IN collagen catabolic process (ortholog); endoplasmic reticulum organization (ortholog); endoplasmic reticulum tubular network organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum tubular network (ortholog); protein-containing complex (ortholog) 9 60391048 60415208 - 30032202 116910609 MODEL JAAIVD010000002;XM_032914555;XM_032914556 XP_032770446;XP_032770447 reticulophagy regulator 3 protein-coding 626120834 Pou2af3 POU class 2 homeobox associating factor 3 ENCODES a protein that exhibits DNA binding (ortholog); transcription coactivator activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 45707211 45716454 - 22301074;30032202 116907951 MODEL JAAIVD010000027;XM_032911173 XP_032767064 Colca2 colorectal cancer associated 2;colorectal cancer-associated protein 2 protein-coding 626120843 Nsun5 NOP2/Sun RNA methyltransferase 5 ENCODES a protein that exhibits rRNA (cytosine-C5-)-methyltransferase activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); cognition (ortholog); corpus callosum development (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 16 18635670 18641041 - 22301074;30032202 116885284 MODEL JAAIVD010000004;XM_032886530;XM_032886531 XP_032742421;XP_032742422 probable 28S rRNA (cytosine-C(5))-methyltransferase protein-coding 626120863 Fgd3 FYVE, RhoGEF and PH domain containing 3 INVOLVED IN filopodium assembly (ortholog) 14 68247509 68297344 - 22301074;30032202 116883485 MODEL JAAIVD010000009;XM_032884640 XP_032740531 FYVE, RhoGEF and PH domain-containing protein 3 protein-coding 626120885 LOC116889790 pregnancy-specific glycoprotein 22-like 30032202 116889790 MODEL JAAIVD010000321;XM_032890640 XP_032746531 protein-coding 626120886 LOC116883652 uncharacterized LOC116883652 14 5908868 5916519 - 116883652 MODEL JAAIVD010000009;XR_004385776 ncrna 626120890 Hmbox1 homeobox containing 1 ENCODES a protein that exhibits double-stranded telomeric DNA binding (ortholog); identical protein binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); telomere maintenance via telomerase (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 12 59460924 59593150 + 22301074;30032202 116913656 MODEL JAAIVD010000007;XM_032917927;XM_032917928;XM_032917930;XM_032917931;XM_032917932;XM_032917933;XM_032917934;XM_032917935;XM_032917936;XM_032917937;XM_032917938;XM_032917939;XM_032917941 XP_032773818;XP_032773819;XP_032773821;XP_032773822;XP_032773823;XP_032773824;XP_032773825;XP_032773826;XP_032773827;XP_032773828;XP_032773829;XP_032773830;XP_032773832 homeobox-containing protein 1 protein-coding 626120928 LOC116903060 proline-rich protein 2-like 6 16186215 16189024 + 30032202 116903060 MODEL JAAIVD010000024;XM_032905357 XP_032761248 protein-coding 626120934 LOC116908257 60S ribosomal protein L6-like 8 97426289 97426945 - 116908257 MODEL JAAIVD010000027 pseudo 626120935 LOC116890181 gametocyte-specific factor 1-like 1 259647221 259653471 + 116890181 MODEL JAAIVD010000025;XM_032890916 XP_032746807 protein-coding 626120946 LOC116890468 small nucleolar RNA SNORA24 1 249918681 249918810 - 116890468 MODEL JAAIVD010000025;XR_004386659 snorna 626120949 LOC116889248 pre-mRNA-splicing factor SPF27-like X 102967078 102967763 + 116889248 MODEL JAAIVD010000014 pseudo 626120950 LOC116913517 zinc finger protein 16-like 1 249258164 249277023 - 116913517 MODEL JAAIVD010000025;XM_032917723 XP_032773614 protein-coding 626120957 LOC116895481 arylacetamide deacetylase-like 2 3 95131127 95145270 - 22301074 116895481 MODEL JAAIVD010000012;XM_032896740;XM_032896741 XP_032752631;XP_032752632 protein-coding 626120966 C8H11orf87 chromosome 8 C11orf87 homolog 8 46667988 46675577 + 116906742 MODEL JAAIVD010000027;XM_032909562;XM_032909563;XM_032909564 XP_032765453;XP_032765454;XP_032765455 uncharacterized protein C11orf87 homolog protein-coding 626120981 LOC116884886 60S ribosomal protein L37a-like 15 57611923 57613149 + 22301074 116884886 MODEL JAAIVD010000010;XM_032886123 XP_032742014 protein-coding 626120985 Smyd5 SMYD family member 5 ENCODES a protein that exhibits histone H3K36 trimethyltransferase activity (ortholog); histone H4K20 methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN cytoplasmic translation (ortholog); negative regulation of gene expression, epigenetic (ortholog); positive regulation of cytoplasmic translational elongation (ortholog); FOUND IN cytoplasm (ortholog) 6 60756442 60770612 - 22301074 116903575 MODEL JAAIVD010000024;XM_032906196 XP_032762087 SET and MYND domain-containing protein 5 protein-coding 626121002 Exosc2 exosome component 2 ENCODES a protein that exhibits RNA exonuclease activity (ortholog); INVOLVED IN positive regulation of cell growth (ortholog); RNA catabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); exosome (RNase complex) (ortholog) 5 3944429 3954299 - 22301074;30032202 116901163 MODEL JAAIVD010000023;XM_032902809;XM_032902810 XP_032758700;XP_032758701 exosome complex component RRP4 protein-coding 626121020 Trim23 tripartite motif containing 23 ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); GTPase activity (ortholog); INVOLVED IN positive regulation of autophagy (ortholog); positive regulation of protein modification process (ortholog); protein ubiquitination (ortholog); FOUND IN cytoplasm (ortholog); Golgi membrane (ortholog); lysosomal membrane (ortholog) 3 193159083 193189659 - 22301074;30032202 116897229 MODEL JAAIVD010000012;XM_032898950 XP_032754841 E3 ubiquitin-protein ligase TRIM23 protein-coding 626121035 Amigo1 adhesion molecule with Ig like domain 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN axonal fasciculation (ortholog); axonogenesis (ortholog); cellular response to L-glutamate (ortholog); ASSOCIATED WITH schizophrenia (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); neuronal cell body membrane (ortholog) 3 50065994 50071407 - 22301074;30032202 116896369 MODEL JAAIVD010000012;XM_032897487;XM_032897488 XP_032753378;XP_032753379 amphoterin-induced protein 1 protein-coding 626121046 LOC116892665 elongation factor 1-gamma-like 1 62937396 62938463 + 116892665 MODEL JAAIVD010000025 pseudo 626121047 C4H6orf141 chromosome 4 C6orf141 homolog INVOLVED IN blastocyst hatching (ortholog) 4 95004028 95004881 + 116899240 MODEL JAAIVD010000003;XM_032900844 XP_032756735 uncharacterized protein C6orf141 homolog protein-coding 626121052 Tmsb10 thymosin beta 10 ASSOCIATED WITH allergic contact dermatitis (ortholog); Experimental Liver Cirrhosis (ortholog) 6 73396477 73397595 - 22301074;30032202 116903671 MODEL JAAIVD010000024;XM_032906331;XM_032906332 XP_032762222;XP_032762223 thymosin beta-10 protein-coding 626121063 LOC116906761 zinc finger protein 709-like 1 157648916 157661933 + 22301074 116906761 MODEL JAAIVD010000025;XM_032909602 XP_032765493 protein-coding 626121071 Dzip1l DAZ interacting zinc finger protein 1 like INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); genetic disease (ortholog); polycystic kidney disease 5 (ortholog); FOUND IN axoneme (ortholog); centriole (ortholog); ciliary basal body (ortholog) 8 90972683 91011241 + 30032202 116907244 MODEL JAAIVD010000027;XM_032910203 XP_032766094 zinc finger protein DZIP1L protein-coding 626121092 LOC116891474 zinc finger protein 764-like 2 74505074 74508068 + 30032202 116891474 MODEL JAAIVD010000001;XM_032892575 XP_032748466 protein-coding 626121099 Styxl1 serine/threonine/tyrosine interacting like 1 ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase binding (ortholog); pseudophosphatase activity (ortholog); INVOLVED IN negative regulation of stress granule assembly (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); positive regulation of neuron projection development (ortholog); FOUND IN mitochondrion (ortholog) 16 18252173 18278817 + 22301074;30032202 116885279 MODEL JAAIVD010000004;XM_032886510 XP_032742401 serine/threonine/tyrosine-interacting-like protein 1 protein-coding 626121112 LOC116889073 amyloid protein-binding protein 2-like X 24630637 24631930 + 116889073 MODEL JAAIVD010000014 pseudo 626121113 Pigt phosphatidylinositol glycan anchor biosynthesis class T ENCODES a protein that exhibits GPI anchor binding (ortholog); INVOLVED IN attachment of GPI anchor to protein (ortholog); GPI anchored protein biosynthesis (ortholog); neuron apoptotic process (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); GPI-anchor transamidase complex (ortholog) 5 153458692 153467751 - 22301074;30032202 116902358 MODEL JAAIVD010000023;XM_032904847;XM_032904848 XP_032760738;XP_032760739 GPI transamidase component PIG-T protein-coding 626121133 LOC116912926 U6 spliceosomal RNA 11 17072330 17072436 + 116912926 MODEL JAAIVD010000006;XR_004389497 snrna 626121136 LOC116885058 small nucleolar RNA SNORA17 15 20649277 20649407 - 116885058 MODEL JAAIVD010000010;XR_004385940 snorna 626121139 LOC116901039 bcl-2-binding component 3 5 131079497 131080345 - 116901039 MODEL JAAIVD010000023;XM_032902621 XP_032758512 bcl-2-binding component 3, isoforms 3/4-like protein-coding 626121143 LOC116908125 transcription initiation factor TFIID subunit 12-like 8 62004956 62005547 - 116908125 MODEL JAAIVD010000027 pseudo 626121144 LOC116902766 glyceraldehyde-3-phosphate dehydrogenase-like 6 70809916 70810912 + 116902766 MODEL JAAIVD010000024 pseudo 626121145 Spp2 secreted phosphoprotein 2 INVOLVED IN protein-containing complex assembly (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); FOUND IN protein-containing complex (ortholog) 4 160452704 160472785 + 22301074;30032202 116898259 MODEL JAAIVD010000003;XM_032899611 XP_032755502 secreted phosphoprotein 24 protein-coding 626121157 Ccdc8 coiled-coil domain containing 8 subunit of 3M complex INVOLVED IN microtubule cytoskeleton organization (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH genetic disease (ortholog); Three M Syndrome 3 (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 2 172082083 172085502 - 30032202 116892570 MODEL JAAIVD010000001;XM_032894347 XP_032750238 coiled-coil domain-containing protein 8 protein-coding 626121163 Sphkap SPHK1 interactor, AKAP domain containing ENCODES a protein that exhibits protein kinase A binding (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); FOUND IN mitochondrion (ortholog); Z disc (ortholog) 4 156078819 156219322 - 30032202 116899570 MODEL JAAIVD010000003;XM_032901483;XM_032901484;XM_032901485 XP_032757374;XP_032757375;XP_032757376 A-kinase anchor protein SPHKAP protein-coding 626121183 Ptprj protein tyrosine phosphatase receptor type J ENCODES a protein that exhibits beta-catenin binding (ortholog); cadherin binding (ortholog); delta-catenin binding (ortholog); INVOLVED IN B cell differentiation (ortholog); blood coagulation (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; platelet-derived growth factor signaling pathway; somatostatin signaling pathway; ASSOCIATED WITH colon carcinoma (ortholog); colorectal cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 5 64615277 64688158 - 22301074;30032202 116900864 MODEL JAAIVD010000023;XM_032902549 XP_032758440 receptor-type tyrosine-protein phosphatase eta protein-coding 626121213 LOC116886180 vomeronasal type-1 receptor 4-like 17 19516791 19517660 - 22301074;30032202 116886180 MODEL JAAIVD010000011;XM_032887549 XP_032743440 protein-coding 626121216 C10H1orf105 chromosome 10 C1orf105 homolog 10 41238869 41282207 - 116911449 MODEL JAAIVD010000005;XM_032915417 XP_032771308 uncharacterized protein C1orf105 homolog protein-coding 626121228 Ackr2 atypical chemokine receptor 2 ENCODES a protein that exhibits C-C chemokine binding (ortholog); C-C chemokine receptor activity (ortholog); chemokine receptor activity (ortholog); INVOLVED IN signal transduction (ortholog); FOUND IN actin filament (ortholog); cytosol (ortholog); nuclear membrane (ortholog) 8 113065685 113069415 + 22301074;30032202 116906894 MODEL JAAIVD010000027;XM_032909805 XP_032765696 protein-coding 626121234 Dcdc1 doublecortin domain containing 1 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN regulation of mitotic cytokinesis (ortholog); ASSOCIATED WITH head and neck cancer (ortholog); FOUND IN Flemming body (ortholog); midbody (ortholog); mitotic spindle (ortholog) 5 84251581 84324171 + 22301074;30032202 116900523 MODEL JAAIVD010000023;XM_032902254 XP_032758145 doublecortin domain-containing protein 1 protein-coding 626121255 Spmap2 sperm microtubule associated protein 2 INVOLVED IN spermatogenesis (ortholog) 1 155288169 155297892 + 30032202 116889872 MODEL JAAIVD010000025;XM_032890697;XM_032890698;XM_032890699 XP_032746588;XP_032746589;XP_032746590 Theg testicular haploid expressed gene protein;theg spermatid protein protein-coding 626121271 LOC116900466 olfactory receptor 4A16-like 5 71351331 71352254 - 22301074 116900466 MODEL JAAIVD010000023;XM_032902203 XP_032758094 protein-coding 626121274 LOC116888723 probasin X 37640240 37655634 - 30032202 116888723 MODEL JAAIVD010000014;XM_032890014 XP_032745905 protein-coding 626121285 Zmiz1 zinc finger MIZ-type containing 1 ENCODES a protein that exhibits SMAD binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); artery morphogenesis (ortholog); cellular senescence (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); celiac disease (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 13 1680611 1774165 + 22301074;30032202 116914697 MODEL JAAIVD010000008;XM_032919115;XM_032919116;XM_032919117;XM_032919118 XP_032775006;XP_032775007;XP_032775008;XP_032775009 zinc finger MIZ domain-containing protein 1 protein-coding 626121316 Zp1 zona pellucida glycoprotein 1 ASSOCIATED WITH genetic disease (ortholog); Oocyte Maturation Defect 1 (ortholog); Oocyte Maturation Defect 3 (ortholog); FOUND IN egg coat (ortholog); extracellular matrix (ortholog) 2 10391103 10397473 - 30032202 116893637 MODEL JAAIVD010000001;XM_032895350;XM_032895351 XP_032751241;XP_032751242 zona pellucida sperm-binding protein 1 protein-coding 626121336 Tpm3 tropomyosin 3 ENCODES a protein that exhibits actin filament binding (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); brush border (ortholog); cleavage furrow (ortholog) 3 63540887 63562162 - 30032202 116896622 MODEL JAAIVD010000012;XM_032897885;XM_032897886;XM_032897888;XM_032897889;XM_032897890;XM_032897891;XM_032897892;XM_032897893;XM_032897894;XM_032897895 XP_032753776;XP_032753777;XP_032753779;XP_032753780;XP_032753781;XP_032753782;XP_032753783;XP_032753784;XP_032753785;XP_032753786 tropomyosin alpha-3 chain protein-coding 626121374 LOC116914170 U6 spliceosomal RNA 12 79644904 79645010 + 116914170 MODEL JAAIVD010000007;XR_004389715 snrna 626121377 LOC116889618 ribosome biogenesis regulatory protein homolog Y 471487 495700 + 116889618 MODEL JAAIVD010000015 pseudo 626121378 LOC116888005 zinc finger CCCH domain-containing protein 11A-like X 76887450 76922851 + 116888005 MODEL JAAIVD010000014 pseudo 626121379 LOC116904495 far upstream element-binding protein 2-like 6 155295491 155477258 - 116904495 MODEL JAAIVD010000024 pseudo 626121380 LOC116894046 olfactory receptor 52M1-like 2 102566287 102567246 - 22301074 116894046 MODEL JAAIVD010000001;XM_032895767 XP_032751658 protein-coding 626121383 LOC116915134 small nucleolar RNA SNORA17 13 22043009 22043140 + 116915134 MODEL JAAIVD010000008;XR_004389813 snorna 626121386 LOC116886614 lon protease homolog 2, peroxisomal-like 17 13952865 14013243 + 22301074;30032202 116886614 MODEL JAAIVD010000011;XM_032888123 XP_032744014 protein-coding 626121403 Nmrk2 nicotinamide riboside kinase 2 ENCODES a protein that exhibits ribosylnicotinamide kinase activity (ortholog); ribosylnicotinate kinase activity (ortholog); INVOLVED IN NAD+ biosynthetic process via the salvage pathway (ortholog); NADP+ biosynthetic process (ortholog); negative regulation of myoblast differentiation (ortholog); PARTICIPATES IN nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 1 153688798 153691527 + 30032202 116889858 MODEL JAAIVD010000025;XM_032890685 XP_032746576 protein-coding 626121412 LOC116896020 pescadillo homolog 3 180351993 180354611 + 116896020 MODEL JAAIVD010000012 pseudo 626121413 LOC116887490 H-2 class I histocompatibility antigen, TLA(B) alpha chain-like 18 9306107 9310310 - 116887490 MODEL JAAIVD010000013 pseudo 626121414 Smarca1 SNF2 related chromatin remodeling ATPase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent chromatin remodeler activity (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); INVOLVED IN brain development (ortholog); chromatin remodeling (ortholog); neuron differentiation (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN ATPase complex (ortholog); CERF complex (ortholog); chromatin (ortholog) X 110533211 110603429 + 22301074;30032202 116888353 MODEL JAAIVD010000014;XM_032889621 XP_032745512 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1;probable global transcription activator SNF2L1 protein-coding 626121442 LOC116883764 40S ribosomal protein S7-like 14 25837333 25837860 + 116883764 MODEL JAAIVD010000009 pseudo 626121443 LOC116898019 protein BEX1-like 1 92813801 92814302 + 116898019 MODEL JAAIVD010000025 pseudo 626121444 Skil SKI like proto-oncogene ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); lens fiber cell differentiation (ortholog); lymphocyte homeostasis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Experimental Liver Cirrhosis (ortholog); Paraquat Lung (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 125338860 125367206 + 22301074;30032202 116896981 MODEL JAAIVD010000012;XM_032898568;XM_032898569 XP_032754459;XP_032754460 ski-like protein protein-coding 626121460 LOC116903011 zinc finger CCHC domain-containing protein 10-like 6 152497103 152497612 + 116903011 MODEL JAAIVD010000024 pseudo 626121461 LOC116892522 poliovirus receptor homolog 2 170699034 170715411 + 30032202 116892522 MODEL JAAIVD010000001;XM_032894277 XP_032750168 protein-coding 626121473 Adgra3 adhesion G protein-coupled receptor A3 ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN external side of plasma membrane (ortholog) 11 55970590 56064373 + 22301074;30032202 116912189 MODEL JAAIVD010000006;XM_032916124 XP_032772015 protein-coding 626121496 Tsc22d3 TSC22 domain family member 3 ENCODES a protein that exhibits MRF binding (ortholog); INVOLVED IN body fluid secretion (ortholog); negative regulation of activation-induced cell death of T cells (ortholog); negative regulation of skeletal muscle tissue development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hyperinsulinism (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 92958099 92962614 - 22301074 116888633 MODEL JAAIVD010000014;XM_032889928 XP_032745819 TSC22 domain family protein 3 protein-coding 626121503 Fam83h family with sequence similarity 83 member H ENCODES a protein that exhibits keratin filament binding (ortholog); protein kinase binding (ortholog); INVOLVED IN intermediate filament cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); protein localization to cytoskeleton (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 3 (ortholog); amelogenesis imperfecta type 3A (ortholog); FOUND IN keratin filament (ortholog) 1 248321856 248330157 - 30032202 116912850 MODEL JAAIVD010000025;XM_032917062 XP_032772953 protein FAM83H protein-coding 626121512 Slc37a4 solute carrier family 37 member 4 ENCODES a protein that exhibits glucose 6-phosphate:phosphate antiporter activity (ortholog); glucose-6-phosphate transmembrane transporter activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); gluconeogenesis (ortholog); glucose homeostasis (ortholog); PARTICIPATES IN electron transport chain pathway; fructose-1,6-bisphosphatase deficiency pathway; gluconeogenesis pathway; ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIw (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 8 38944148 38950275 + 30032202 116906581 MODEL JAAIVD010000027;XM_032909312;XM_032909313;XM_032909314;XM_032909316;XM_032909317 XP_032765203;XP_032765204;XP_032765205;XP_032765207;XP_032765208 glucose-6-phosphate exchanger SLC37A4 protein-coding 626121541 Fbxw7 F-box and WD repeat domain containing 7 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); phosphothreonine residue binding (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 3 68613542 68797625 - 30032202 116896733 MODEL JAAIVD010000012;XM_032898155;XM_032898156;XM_032898157;XM_032898158;XM_032898159 XP_032754046;XP_032754047;XP_032754048;XP_032754049;XP_032754050 F-box/WD repeat-containing protein 7 protein-coding 626121568 LOC116912693 cytokine receptor-like factor 2 11 18760592 18761599 + 116912693 MODEL JAAIVD010000006 pseudo 626121569 Nucb2 nucleobindin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN insulin metabolic process (ortholog); negative regulation of appetite (ortholog); negative regulation of cAMP/PKA signal transduction (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); obesity (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 2 85041108 85077309 - 22301074;30032202 116891621 MODEL JAAIVD010000001;XM_032892827 XP_032748718 nucleobindin-2 protein-coding 626121585 Scarb1 scavenger receptor class B member 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I binding (ortholog); apolipoprotein binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); blood vessel endothelial cell migration (ortholog); cholesterol catabolic process (ortholog); PARTICIPATES IN retinol metabolic pathway; reverse cholesterol transport pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); cannabis abuse (ortholog); carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); caveola (ortholog) 16 28575614 28640311 + 30032202 116885256 MODEL JAAIVD010000004;XM_032886494 XP_032742385 protein-coding 626121601 LOC116895274 small proline-rich protein 2I-like 3 1695503 1695733 - 22301074 116895274 MODEL JAAIVD010000012;XM_032896591 XP_032752482 protein-coding 626121604 LOC116904663 U7 small nuclear RNA 6 152531389 152531453 + 116904663 MODEL JAAIVD010000024;XR_004388363 snrna 626121607 LOC116891097 40S ribosomal protein S4, X isoform-like 2 33339735 33340503 + 116891097 MODEL JAAIVD010000001 pseudo 626121608 LOC116900223 rho-related GTP-binding protein RhoG-like 5 61641400 61641956 - 116900223 MODEL JAAIVD010000023 pseudo 626121609 Veph1 ventricular zone expressed PH domain containing 1 INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH long QT syndrome (ortholog) 3 88895609 89669064 + 30032202 116896809 MODEL JAAIVD010000012;XM_032898283 XP_032754174 ventricular zone-expressed PH domain-containing protein homolog 1 protein-coding 626121627 Anxa10 annexin A10 ASSOCIATED WITH hepatocellular carcinoma (ortholog); pancreatic cancer (ortholog) 13 26841230 26917795 + 22301074;30032202 116914824 MODEL JAAIVD010000008;XM_032919279 XP_032775170 protein-coding 626121643 Eng endoglin ENCODES a protein that exhibits BMP binding (ortholog); coreceptor activity (ortholog); galactose binding (ortholog); INVOLVED IN angiogenesis (ortholog); artery morphogenesis (ortholog); atrial cardiac muscle tissue morphogenesis (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); arteriovenous malformation (ortholog); arteriovenous malformations of the brain (ortholog); FOUND IN cell surface (ortholog); endothelial microparticle (ortholog); external side of plasma membrane (ortholog) 5 2956718 2968704 - 30032202 116899992 MODEL JAAIVD010000023;XM_032901802 XP_032757693 protein-coding 626121659 LOC116886885 olfactory receptor 5V1-like 18 10501407 10502360 + 22301074 116886885 MODEL JAAIVD010000013;XM_032888343 XP_032744234 protein-coding 626121662 Rnf224 ring finger protein 224 5 11945790 11946260 + 116900806 MODEL JAAIVD010000023;XM_032902522 XP_032758413 protein-coding 626121665 Duox1 dual oxidase 1 INVOLVED IN cuticle development (ortholog); cytokine-mediated signaling pathway (ortholog); hydrogen peroxide biosynthetic process (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH influenza A (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); endoplasmic reticulum (ortholog) 5 100422183 100455626 + 22301074;30032202 116901887 MODEL JAAIVD010000023;XM_032904094 XP_032759985 protein-coding 626121702 LOC116910708 small nucleolar RNA SNORA17 9 28393815 28393946 + 116910708 MODEL JAAIVD010000002;XR_004389235 snorna 626121705 Ambra1 autophagy and beclin 1 regulator 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein phosphatase activator activity (ortholog); protein phosphatase binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN inositol metabolic pathway; mitochondrial autophagy pathway; phosphoinositide metabolic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); esophageal atresia (ortholog); multiple system atrophy (ortholog); FOUND IN axoneme (ortholog); Cul4-RING E3 ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 5 65873993 66062789 + 22301074;30032202 116901630 MODEL JAAIVD010000023;XM_032903706;XM_032903707;XM_032903709;XM_032903710;XM_032903711;XM_032903712;XM_032903713;XM_032903714 XP_032759597;XP_032759598;XP_032759600;XP_032759601;XP_032759602;XP_032759603;XP_032759604;XP_032759605 activating molecule in BECN1-regulated autophagy protein 1 protein-coding 626121737 Aifm3 AIF family member 3 INVOLVED IN execution phase of apoptosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); mitochondrial inner membrane (ortholog) 4 2743514 2760084 + 22301074;30032202 116898640 MODEL JAAIVD010000003;XM_032899860;XM_032899861;XM_032899862;XM_032899863;XM_032899864 XP_032755751;XP_032755752;XP_032755753;XP_032755754;XP_032755755 apoptosis inducing factor mitochondria associated 3;apoptosis-inducing factor 3 protein-coding 626121772 LOC116885552 uncharacterized LOC116885552 16 33399553 33411375 + 116885552 MODEL JAAIVD010000004;XR_004386023 ncrna 626121776 Gbe1 1,4-alpha-glucan branching enzyme 1 ENCODES a protein that exhibits 1,4-alpha-glucan branching enzyme activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); negative regulation of neuron apoptotic process (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen storage disease type III pathway; ASSOCIATED WITH autosomal recessive cutis laxa type IB (ortholog); Familial Cirrhosis with Deposition of Abnormal Glycogen (ortholog); fetal akinesia deformation sequence syndrome 1 (ortholog); FOUND IN cytosol (ortholog) 4 71470420 71714918 - 22301074;30032202 116899054 MODEL JAAIVD010000003;XM_032900525 XP_032756416 1,4-alpha-glucan-branching enzyme protein-coding 626121796 B3gat2 beta-1,3-glucuronyltransferase 2 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN carbohydrate biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Barrett's esophagus (ortholog); schizophrenia (ortholog) 4 100810905 101200795 + 22301074;30032202 116899253 MODEL JAAIVD010000003;XM_032900861 XP_032756752 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 2 protein-coding 626121804 LOC116902607 small nucleolar RNA SNORA17 5 85757457 85757582 - 116902607 MODEL JAAIVD010000023;XR_004388193 snorna 626121807 LOC116911878 U6 spliceosomal RNA 10 28865355 28865461 - 116911878 MODEL JAAIVD010000005;XR_004389392 snrna 626121810 LOC116903659 60S ribosomal protein L28-like 6 1288175 1356109 - 116903659 MODEL JAAIVD010000024 pseudo 626121811 LOC116884113 U6 spliceosomal RNA 14 29590968 29591074 - 116884113 MODEL JAAIVD010000009;XR_004385844 snrna 626121814 LOC116889471 small nucleolar RNA SNORA69 X 103267741 103267875 - 116889471 MODEL JAAIVD010000014;XR_004386423 snorna 626121817 LOC116902611 small nucleolar RNA SNORA17 5 142289592 142289715 - 116902611 MODEL JAAIVD010000023 pseudo 626121818 LOC116905063 high mobility group protein B1-like 7 69174168 69174791 + 116905063 MODEL JAAIVD010000026 pseudo 626121819 Agtr1 angiotensin II receptor type 1 ENCODES a protein that exhibits angiotensin type I receptor activity (ortholog); angiotensin type II receptor activity (ortholog); bradykinin receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); angiotensin-activated signaling pathway (ortholog); blood vessel development (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); AIDS-Associated Nephropathy (ortholog); Alveolar Bone Loss (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 3 133806801 133807880 + 22301074;30032202 116895565 MODEL JAAIVD010000012;X64052;XM_032896798 CAA45410;XP_032752689 AT1B type-1 angiotensin II receptor protein-coding 626121822 Lpo lactoperoxidase ENCODES a protein that exhibits peroxidase activity (ortholog); thiocyanate peroxidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 9 82974140 82993385 + 22301074;30032202 116909825 MODEL JAAIVD010000002;XM_032913541 XP_032769432 protein-coding 626121839 Me1 malic enzyme 1 ENCODES a protein that exhibits identical protein binding (ortholog); magnesium ion binding (ortholog); malate dehydrogenase (decarboxylating) (NADP+) activity (ortholog); INVOLVED IN malate metabolic process (ortholog); NADP+ metabolic process (ortholog); obsolete NADH metabolic process (ortholog); PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 8 80629671 80743131 - 22301074;30032202 116906813 MODEL JAAIVD010000027;XM_032909690 XP_032765581 NADP-dependent malic enzyme protein-coding 626121857 LOC116883664 zinc finger protein with KRAB and SCAN domains 3-like 14 40962606 40968961 - 30032202 116883664 MODEL JAAIVD010000009;XM_032884860 XP_032740751 protein-coding 626121864 LOC116890155 uncharacterized LOC116890155 1 251794018 251801615 + 116890155 MODEL JAAIVD010000025;XM_032890888 XP_032746779 uncharacterized protein LOC116890155 protein-coding 626121869 Ybx2 Y-box binding protein 2 ENCODES a protein that exhibits chromatin binding (ortholog); lipid binding (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN mRNA stabilization (ortholog); negative regulation of translation (ortholog); oocyte development (ortholog); FOUND IN cytoplasm (ortholog); ribonucleoprotein complex (ortholog) 9 49544143 49550016 + 22301074;30032202 116909380 MODEL JAAIVD010000002;XM_032912934 XP_032768825 Y-box-binding protein 2 protein-coding 626121882 Usp10 ubiquitin specific peptidase 10 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); chromatin remodeling (ortholog); DNA damage response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 17 39561684 39604147 + 22301074;30032202 116886201 MODEL JAAIVD010000011;XM_032887586;XM_032887587 XP_032743477;XP_032743478 ubiquitin carboxyl-terminal hydrolase 10 protein-coding 626121904 Ptms parathymosin ENCODES a protein that exhibits zinc ion binding (ortholog) 6 22957471 22974109 + 30032202 116903868 MODEL JAAIVD010000024;XM_032906619 XP_032762510 protein-coding 626121913 Hs3st1 heparan sulfate-glucosamine 3-sulfotransferase 1 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); coronary artery disease (ortholog); FOUND IN Golgi apparatus (ortholog) 11 65605139 65635742 + 30032202 116912132 MODEL JAAIVD010000006;XM_032916042 XP_032771933 heparan sulfate glucosamine 3-O-sulfotransferase 1 protein-coding 626121919 Foxr2 forkhead box R2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Nerve Sheath Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) X 18370180 18371245 + 22301074;30032202 116888726 MODEL JAAIVD010000014;XM_032890017 XP_032745908 forkhead box protein R2 protein-coding 626121924 LOC116891571 glyceraldehyde-3-phosphate dehydrogenase-like 2 80370589 80371783 + 116891571 MODEL JAAIVD010000001 pseudo 626121925 LOC116889566 U4 spliceosomal RNA X 98312331 98312455 + 116889566 MODEL JAAIVD010000014 pseudo 626121926 LOC116903518 40S ribosomal protein S11-like 1 139927993 139928463 - 116903518 MODEL JAAIVD010000025 pseudo 626121927 Nsmce4a NSE4A component of SMC5/6 complex INVOLVED IN DNA damage response (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); Smc5-Smc6 complex (ortholog) 2 71541542 71556205 + 30032202 116891424 MODEL JAAIVD010000001;XM_032892464 XP_032748355 NSE4 homolog A, SMC5-SMC6 complex component;non-structural maintenance of chromosomes element 4 homolog A protein-coding 626121941 LOC116911760 60S ribosomal protein L23a-like 10 16853394 16853870 + 116911760 MODEL JAAIVD010000005 pseudo 626121942 Znf317 zinc finger protein 317 8 15308385 15321664 + 30032202 116906765 MODEL JAAIVD010000027;XM_032909608;XM_032909609 XP_032765499;XP_032765500 protein-coding 626121955 LOC116900809 60S ribosomal protein L28-like 5 29685315 29685754 + 116900809 MODEL JAAIVD010000023 pseudo 626121956 LOC116908155 microtubule-associated protein RP/EB family member 1-like 8 35460880 35461667 - 116908155 MODEL JAAIVD010000027 pseudo 626121957 LOC116895061 small nucleolar RNA SNORA17 2 97212999 97213125 + 116895061 MODEL JAAIVD010000001;XR_004387238 snorna 626121960 Trnastop-uca transfer RNA opal suppressor (anticodon UCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889735 MODEL JAAIVD010000069 trna 626121961 Hnf4g hepatocyte nuclear factor 4 gamma ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); mitotic spindle (ortholog) 3 140875527 141015788 - 22301074;30032202 116897017 MODEL JAAIVD010000012;XM_032898622;XM_032898623;XM_032898624 XP_032754513;XP_032754514;XP_032754515 hepatocyte nuclear factor 4-gamma protein-coding 626121981 LOC116914369 T-complex protein 1 subunit zeta-like 13 77473113 77474527 - 116914369 MODEL JAAIVD010000008 pseudo 626121982 LOC116888391 ornithine decarboxylase-like X 23439202 23440753 - 116888391 MODEL JAAIVD010000014 pseudo 626121983 LOC116902713 taste receptor type 2 member 124 6 16513234 16514163 + 22301074;30032202 116902713 MODEL JAAIVD010000024;XM_032905069 XP_032760960 protein-coding 626121986 Jarid2 jumonji and AT-rich interaction domain containing 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone demethylase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); facultative heterochromatin formation (ortholog); liver development (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN ESC/E(Z) complex (ortholog); histone methyltransferase complex (ortholog); mitochondrion (ortholog) 14 63733712 63911943 + 22301074;30032202 116883315 MODEL JAAIVD010000009;XM_032884367;XM_032884369;XM_032884370;XM_032884371 XP_032740258;XP_032740260;XP_032740261;XP_032740262 protein Jumonji protein-coding 626122017 Pgap2 post-GPI attachment to proteins 2 INVOLVED IN GPI anchor biosynthetic process (ortholog); protein localization to plasma membrane (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome 3 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 2 100506994 100534998 + 30032202 116891786 MODEL JAAIVD010000001;XM_032893133;XM_032893134;XM_032893135 XP_032749024;XP_032749025;XP_032749026 post-GPI attachment to proteins factor 2 protein-coding 626122038 LOC116892813 uncharacterized LOC116892813 2 187216235 187279714 + 116892813 MODEL JAAIVD010000001;XM_032894691 XP_032750582 uncharacterized protein LOC116892813 protein-coding 626122055 LOC116895941 60S ribosomal protein L36-like 3 133038217 133039876 + 116895941 MODEL JAAIVD010000012 pseudo 626122056 Siva1 SIVA1 apoptosis inducing factor ENCODES a protein that exhibits CD27 receptor binding (ortholog); tumor necrosis factor receptor binding (ortholog); virus receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Coxsackievirus Infections (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 7 130238982 130243339 + 30032202 116905515 MODEL JAAIVD010000026;XM_032908538 XP_032764429 apoptosis regulatory protein Siva protein-coding 626122064 LOC116905824 40S ribosomal protein S10-like 7 52911336 52911827 - 30032202 116905824 MODEL JAAIVD010000026;XM_032908791 XP_032764682 protein-coding 626122067 Klhl17 kelch like family member 17 ENCODES a protein that exhibits actin filament binding (ortholog); molecular adaptor activity (ortholog); POZ domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); regulation protein catabolic process at postsynapse (ortholog); ASSOCIATED WITH esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN actin cytoskeleton (ortholog); dendrite cytoplasm (ortholog); glutamatergic synapse (ortholog) 1 4434525 4439982 + 22301074 116891488 MODEL JAAIVD010000025;XM_032892596;XM_032892605;XM_032892614;XM_032892624;XM_032892634 XP_032748487;XP_032748496;XP_032748505;XP_032748515;XP_032748525 kelch-like protein 17 protein-coding 626122092 Csf1r colony stimulating factor 1 receptor ENCODES a protein that exhibits cytokine binding (ortholog); macrophage colony-stimulating factor receptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN axon guidance (ortholog); cardiac muscle cell proliferation (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); adult-onset leukoencephalopathy with axonal spheroids and pigmented glia (ortholog); FOUND IN cell body (ortholog); cell surface (ortholog); CSF1-CSF1R complex (ortholog) 15 70814737 70840619 - 22301074;30032202 116884975 MODEL JAAIVD010000010;XM_032886196 XP_032742087 macrophage colony-stimulating factor 1 receptor protein-coding 626122117 LOC116904758 small nucleolar RNA SNORA17 6 42690429 42690561 - 116904758 MODEL JAAIVD010000024;XR_004388434 snorna 626122120 LOC116904649 5.8S ribosomal RNA 6 64779762 64779914 - 116904649 MODEL JAAIVD010000024;XR_004388352 rrna 626122123 LOC116898384 ADP-ribosylation factor-like protein 2-binding protein 4 72056859 72057541 - 116898384 MODEL JAAIVD010000003 pseudo 626122124 LOC116912558 zinc finger protein 420-like 11 96727692 96733074 - 30032202 116912558 MODEL JAAIVD010000006;XM_032916659;XM_032916660 XP_032772550;XP_032772551 protein-coding 626122133 Dnajc7 DnaJ heat shock protein family (Hsp40) member C7 ENCODES a protein that exhibits heat shock protein binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); epilepsy (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 59884277 59919747 - 22301074 116908710 MODEL JAAIVD010000002;XM_032912047;XM_032912048 XP_032767938;XP_032767939 dnaJ homolog subfamily C member 7 protein-coding 626122156 LOC116894614 vomeronasal type-2 receptor 116-like 2 185339156 185349125 - 22301074;30032202 116894614 MODEL JAAIVD010000001;XM_032896328 XP_032752219 protein-coding 626122164 B4galnt4 beta-1,4-N-acetyl-galactosaminyltransferase 4 ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog) 2 8400184 8411222 - 22301074;30032202 116890889 MODEL JAAIVD010000001;XM_032891503 XP_032747394 N-acetyl-beta-glucosaminyl-glycoprotein 4-beta-N-acetylgalactosaminyltransferase 1 protein-coding 626122188 Scn9a sodium voltage-gated channel alpha subunit 9 ENCODES a protein that exhibits voltage-gated sodium channel activity (ortholog); INVOLVED IN action potential propagation (ortholog); behavioral response to formalin induced pain (ortholog); behavioral response to pain (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease dominant intermediate B (ortholog); Chronic Pain (ortholog); Congenital Indifference to Pain, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); node of Ranvier (ortholog) 5 43909197 43989917 - 22301074;30032202 116901469 MODEL JAAIVD010000023;XM_032903419 XP_032759310 sodium channel protein type 9 subunit alpha protein-coding 626122218 LOC116889199 ribosome biogenesis protein NSA2 homolog X 51755325 51756110 + 116889199 MODEL JAAIVD010000014 pseudo 626122219 LOC116910259 olfactory receptor 56-like 9 31807464 31808417 + 22301074 116910259 MODEL JAAIVD010000002;XM_032914144 XP_032770035 protein-coding 626122222 LOC116898189 aldehyde oxidase 3 4 134197997 134280689 - 22301074;30032202 116898189 MODEL JAAIVD010000003;XM_032899553 XP_032755444 protein-coding 626122261 LOC116905008 high mobility group protein B4-like 7 58048095 58048646 - 30032202 116905008 MODEL JAAIVD010000026;XM_032907693 XP_032763584 protein-coding 626122265 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889660 MODEL JAAIVD010000045 trna 626122266 Il5 interleukin 5 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-5 receptor binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); eosinophil differentiation (ortholog); interleukin-5-mediated signaling pathway (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-4 signaling pathway; interleukin-5 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); allergic contact dermatitis (ortholog); allergic rhinitis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 9 36201293 36204023 + 22301074 116908498 MODEL JAAIVD010000002;X54419;XM_032911654 CAA38283;XP_032767545 interleukin-5 protein-coding 626122272 Tas1r3 taste 1 receptor member 3 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); sensory perception of sweet taste (ortholog); sensory perception of umami taste (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog); sweet taste receptor complex (ortholog) 1 4765966 4770051 + 22301074;30032202 116891806 MODEL JAAIVD010000025;XM_032893167 XP_032749058 taste receptor type 1 member 3 protein-coding 626122282 LOC116885991 U6 spliceosomal RNA 16 31346839 31346944 - 116885991 MODEL JAAIVD010000004;XR_004386066 snrna 626122285 Brox BRO1 domain and CAAX motif containing INVOLVED IN mitotic nuclear membrane reassembly (ortholog); FOUND IN nuclear envelope (ortholog) 10 61534294 61554198 - 116911044 MODEL JAAIVD010000005;XM_032914793;XM_032914794 XP_032770684;XP_032770685 BRO1 domain-containing protein BROX protein-coding 626122303 Mrpl27 mitochondrial ribosomal protein L27 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 50889543 50895327 - 22301074;30032202 116909884 MODEL JAAIVD010000002;XM_032913623 XP_032769514 39S ribosomal protein L27, mitochondrial protein-coding 626122311 Slc3a1 solute carrier family 3 member 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN amino acid transport (ortholog); aspartate transmembrane transport (ortholog); gene expression (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cystinuria (ortholog); genetic disease (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); vacuolar membrane (ortholog) 7 7869823 7902937 - 22301074;30032202 116905774 MODEL JAAIVD010000026;XM_032908745 XP_032764636 neutral and basic amino acid transport protein rBAT protein-coding 626122325 LOC116887100 keratin-associated protein 10-1-like 18 1152789 1160773 + 22301074;30032202 116887100 MODEL JAAIVD010000013;XM_032888625;XM_032888626;XM_032888627;XM_032888628 XP_032744516;XP_032744517;XP_032744518;XP_032744519 keratin-associated protein 10-11-like;keratin-associated protein 10-9-like protein-coding 626122340 LOC116896103 thioredoxin-like protein 4A 3 145340423 145340614 + 116896103 MODEL JAAIVD010000012 pseudo 626122341 LOC116886956 tubulin alpha-1B chain-like 18 31643111 31643919 - 116886956 MODEL JAAIVD010000013 pseudo 626122342 Intu inturned planar cell polarity protein ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN cilium assembly (ortholog); embryonic digit morphogenesis (ortholog); hair follicle morphogenesis (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); genetic disease (ortholog); Growth Disorders (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary transition zone (ortholog) 3 113143612 113218335 - 22301074;30032202 116896911 MODEL JAAIVD010000012;XM_032898470 XP_032754361 protein inturned protein-coding 626122362 LOC116886964 uncharacterized LOC116886964 18 34546973 34551571 + 22301074 116886964 MODEL JAAIVD010000013;XM_032888459 XP_032744350 uncharacterized protein LOC116886964 protein-coding 626122367 Cfap206 cilia and flagella associated protein 206 INVOLVED IN regulation of cilium beat frequency (ortholog); regulation of flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog) 1 63194840 63243740 + 30032202 116892736 MODEL JAAIVD010000025;XM_032894644 XP_032750535 cilia- and flagella-associated protein 206 protein-coding 626122383 Spmip1 sperm microtubule inner protein 1 6 110093656 110096558 - 116904014 MODEL JAAIVD010000024;XM_032906835 XP_032762726 Atp6v1fnb ATP6V1F neighbor;protein ATP6V1FNB;sperm associated microtubule inner protein 1 protein-coding 626122389 Sh3bp5 SH3 domain binding protein 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); protein kinase inhibitor activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); negative regulation of protein kinase activity (ortholog); FOUND IN cytoplasmic vesicle membrane (ortholog); mitochondrion (ortholog); nuclear body (ortholog) 13 7092509 7158211 - 22301074;30032202 116914543 MODEL JAAIVD010000008;XM_032918875 XP_032774766 SH3 domain-binding protein 5 protein-coding 626122402 LOC116911833 small nucleolar RNA SNORA17 10 3035125 3035246 + 116911833 MODEL JAAIVD010000005 pseudo 626122403 LOC116884390 epidermal growth factor-like protein 7 15 58263535 58264444 - 116884390 MODEL JAAIVD010000010 pseudo 626122404 U2af1 U2 small nuclear RNA auxiliary factor 1 ENCODES a protein that exhibits RS domain binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); myelodysplastic syndrome (ortholog); osteoporosis (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 18 2204489 2215432 + 22301074;30032202 116887021 MODEL JAAIVD010000013;XM_032888508;XM_032888509;XM_032888510 XP_032744399;XP_032744400;XP_032744401 splicing factor U2AF 35 kDa subunit protein-coding 626122421 Egr2 early growth response 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta development (ortholog); brain segmentation (ortholog); facial nerve structural organization (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth disease type 1 (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 18 19289920 19294246 - 30032202 116887336 MODEL JAAIVD010000013;XM_032888928 XP_032744819 E3 SUMO-protein ligase EGR2 protein-coding 626122427 Uckl1 uridine-cytidine kinase 1 like 1 PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway 5 158659394 158671952 - 22301074;30032202 116902449 MODEL JAAIVD010000023;XM_032905005;XM_032905006;XM_032905007;XM_032905008;XM_032905009;XM_032905010 XP_032760896;XP_032760897;XP_032760898;XP_032760899;XP_032760900;XP_032760901 uridine-cytidine kinase-like 1 protein-coding 626122457 Ptges3l prostaglandin E synthase 3 like 9 60711678 60719284 - 30032202 116908581 MODEL JAAIVD010000002;XM_032911796;XM_032911797 XP_032767687;XP_032767688 putative protein PTGES3L protein-coding 626122471 LOC116890235 olfactory receptor 8S1-like 1 271162296 271163213 - 22301074 116890235 MODEL JAAIVD010000025;XM_032890964 XP_032746855 protein-coding 626122474 LOC116885351 60S ribosomal protein L21-like 1 40014115 40017422 + 116885351 MODEL JAAIVD010000025 pseudo 626122475 LOC116908229 olfactory receptor 8G1-like 8 82333210 82334290 + 116908229 MODEL JAAIVD010000027 pseudo 626122476 Fnip1 folliculin interacting protein 1 ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); enzyme activator activity (ortholog); enzyme binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cellular response to nutrient levels (ortholog); cellular response to starvation (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 93 (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 9 36886810 36968900 + 30032202 116908662 MODEL JAAIVD010000002;XM_032911939 XP_032767830 folliculin-interacting protein 1 protein-coding 626122498 LOC116884093 small nucleolar RNA SNORA17 14 25518034 25518160 - 116884093 MODEL JAAIVD010000009;XR_004385832 snorna 626122501 LOC116884641 eukaryotic translation initiation factor 1-like 15 41661883 41662416 - 22301074;30032202 116884641 MODEL JAAIVD010000010;XM_032885783 XP_032741674 protein-coding 626122506 LOC116888966 cytochrome b-c1 complex subunit 7-like X 7647772 7655764 + 116888966 MODEL JAAIVD010000014 pseudo 626122507 Extl1 exostosin like glycosyltransferase 1 ENCODES a protein that exhibits glucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 1 23874292 23890570 + 22301074;30032202 116894782 MODEL JAAIVD010000025;XM_032896437 XP_032752328 exostosin-like 1 protein-coding 626122522 LOC116893647 non-histone chromosomal protein HMG-14-like 2 10880577 10880869 - 116893647 MODEL JAAIVD010000001 pseudo 626122523 LOC116909174 olfactory receptor 2D2-like 1 38005575 38006516 + 22301074 116909174 MODEL JAAIVD010000025;XM_032913034 XP_032768925 protein-coding 626122526 Lcat lecithin-cholesterol acyltransferase ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); apolipoprotein A-I binding (ortholog); phosphatidylcholine-sterol O-acyltransferase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); cholesterol transport (ortholog); PARTICIPATES IN reverse cholesterol transport pathway; ASSOCIATED WITH arteriosclerosis (ortholog); Chemical and Drug Induced Liver Injury (ortholog); end stage renal disease (ortholog); FOUND IN extracellular space (ortholog); high-density lipoprotein particle (ortholog) 17 25680084 25683588 - 22301074;30032202 116886268 MODEL JAAIVD010000011;XM_032887689;XM_032887690 XP_032743580;XP_032743581 phosphatidylcholine-sterol acyltransferase protein-coding 626122539 LOC116910915 60S ribosomal protein L6-like 10 51879196 51881396 + 116910915 MODEL JAAIVD010000005 pseudo 626122540 LOC116904624 olfactory receptor 6C4-like 6 30122470 30123453 - 22301074;30032202 116904624 MODEL JAAIVD010000024;XM_032907414 XP_032763305 protein-coding 626122543 LOC116912374 60S ribosomal protein L37-like 11 68616646 68617743 + 116912374 MODEL JAAIVD010000006 pseudo 626122544 LOC116898470 DNA repair protein SWI5 homolog 4 109636643 109662807 - 116898470 MODEL JAAIVD010000003 pseudo 626122545 Hnrnpu heterogeneous nuclear ribonucleoprotein U ENCODES a protein that exhibits actin binding (ortholog); ATP binding (ortholog); chromatin binding (ortholog); INVOLVED IN adaptive thermogenesis (ortholog); brown fat cell differentiation (ortholog); cardiac muscle cell development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); colorectal cancer (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cell surface (ortholog); centrosome (ortholog) 10 56668171 56685876 - 30032202 116911329 MODEL JAAIVD010000005;XM_032915247;XR_004389321 XP_032771138 protein-coding 626122567 LOC116892897 zinc finger protein 58-like 2 199696127 199738452 + 30032202 116892897 MODEL JAAIVD010000001;XM_032894809;XM_032894810 XP_032750700;XP_032750701 zinc finger protein 728-like protein-coding 626122581 Rwdd2b RWD domain containing 2B 4 56412997 56421125 + 22301074 116899031 MODEL JAAIVD010000003;XM_032900485 XP_032756376 RWD domain-containing protein 2B protein-coding 626122590 LOC116895196 olfactory receptor 2AG2-like 3 386009 386953 + 22301074 116895196 MODEL JAAIVD010000012;XM_032896538 XP_032752429 protein-coding 626122593 Ccdc188 coiled-coil domain containing 188 ASSOCIATED WITH male infertility due to acephalic spermatozoa (ortholog) 4 3486562 3488925 + 116898664 MODEL JAAIVD010000003;XM_032899900 XP_032755791 coiled-coil domain-containing protein 188 protein-coding 626122605 Csmd3 CUB and Sushi multiple domains 3 INVOLVED IN regulation of dendrite development (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hereditary breast ovarian cancer syndrome (ortholog); Hirschsprung's disease (ortholog); FOUND IN plasma membrane (ortholog) 1 221937548 223528680 - 30032202 116911303 MODEL JAAIVD010000025;XM_032915219;XM_032915225 XP_032771110;XP_032771116 CUB and sushi domain-containing protein 3 protein-coding 626122681 Irx1 iroquois homeobox 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN metanephros development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of gene expression (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); congenital heart disease (ortholog); congestive heart failure (ortholog) 2 203281747 203287298 - 22301074;30032202 116894653 MODEL JAAIVD010000001;XM_032896359 XP_032752250 iroquois-class homeodomain protein IRX-1 protein-coding 626122689 LOC116912937 U1 spliceosomal RNA 11 70523067 70523220 - 116912937 MODEL JAAIVD010000006 pseudo 626122690 Tmprss5 transmembrane serine protease 5 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); FOUND IN neuronal cell body (ortholog); plasma membrane (ortholog) 8 43592542 43603631 + 22301074;30032202 116907500 MODEL JAAIVD010000027;XM_032910495 XP_032766386 transmembrane protease serine 5 protein-coding 626122706 Mblac2 metallo-beta-lactamase domain containing 2 ENCODES a protein that exhibits beta-lactamase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); mitochondrion (ortholog); plasma membrane (ortholog) 3 214614984 214664538 - 116897331 MODEL JAAIVD010000012;XM_032899087 XP_032754978 metallo-beta-lactamase domain-containing protein 2 protein-coding 626122712 Dek DEK proto-oncogene ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase III (ortholog); regulation of double-strand break repair (ortholog); regulation of double-strand break repair via nonhomologous end joining (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); Breast Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN B-WICH complex (ortholog); contractile muscle fiber (ortholog); nucleoplasm (ortholog) 14 66076087 66097525 - 30032202 116883374 MODEL JAAIVD010000009;XM_032884490 XP_032740381 protein DEK protein-coding 626122727 Herc4 HECT and RLD domain containing E3 ubiquitin protein ligase 4 INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); spermatogenesis (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog) 18 23391050 23463174 - 30032202 116887532 MODEL JAAIVD010000013;XM_032889161;XM_032889162;XM_032889163 XP_032745052;XP_032745053;XP_032745054 probable E3 ubiquitin-protein ligase HERC4 protein-coding 626122764 Lxn latexin ENCODES a protein that exhibits metalloendopeptidase inhibitor activity (ortholog); INVOLVED IN detection of temperature stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH Chromosomal Instability (ortholog); melanoma (ortholog) 3 87775865 87781929 + 30032202 116896805 MODEL JAAIVD010000012;XM_032898278 XP_032754169 protein-coding 626122774 Pcdh17 protocadherin 17 INVOLVED IN adult behavior (ortholog); negative regulation of synaptic transmission (ortholog); presynaptic active zone assembly (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 12 39979747 40070743 - 22301074 116914052 MODEL JAAIVD010000007;XM_032918334;XM_032918335;XM_032918336 XP_032774225;XP_032774226;XP_032774227 protocadherin-17 protein-coding 626122788 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 204868748 204868819 + 116895131 MODEL JAAIVD010000001 trna 626122789 LOC116901115 protein disulfide-isomerase A5-like 1 79359913 79392718 - 116901115 MODEL JAAIVD010000025;XR_004387958 pseudo 626122795 LOC116893209 ribosomal biogenesis factor-like 2 108728442 108728739 - 116893209 MODEL JAAIVD010000001 pseudo 626122796 LOC116885619 zinc finger protein 431-like 16 44261915 44269835 + 30032202 116885619 MODEL JAAIVD010000004;XM_032886919 XP_032742810 protein-coding 626122806 LOC116894179 olfactory receptor 481-like 2 105925122 105926060 + 22301074;30032202 116894179 MODEL JAAIVD010000001;XM_032895896 XP_032751787 protein-coding 626122809 Ces4a carboxylesterase 4A 17 24862397 24880451 + 116886461 MODEL JAAIVD010000011;XM_032887962;XM_032887963 XP_032743853;XP_032743854 protein-coding 626122831 Med28 mediator complex subunit 28 INVOLVED IN negative regulation of smooth muscle cell differentiation (ortholog); somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); focal segmental glomerulosclerosis (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN core mediator complex (ortholog); cortical actin cytoskeleton (ortholog); cytoskeleton (ortholog) 11 60357136 60364494 - 30032202 116912549 MODEL JAAIVD010000006;XM_032916649 XP_032772540 mediator of RNA polymerase II transcription subunit 28 protein-coding 626122839 Folh1b Putative N-acetylated-alpha-linked acidic dipeptidase ENCODES a protein that exhibits Ac-Asp-Glu binding (ortholog); metallocarboxypeptidase activity (ortholog); INVOLVED IN glutamate biosynthetic process (ortholog); positive regulation of glutamate receptor signaling pathway (ortholog) 2 114299320 114360365 + 30032202 116891870 MODEL JAAIVD010000001;XM_032893270;XM_032893271 XP_032749161;XP_032749162 folate hydrolase 1B protein-coding 626122865 Uggt2 UDP-glucose glycoprotein glucosyltransferase 2 FOUND IN protein-containing complex (ortholog) 12 6770281 6926965 + 22301074;30032202 116913079 MODEL JAAIVD010000007;XM_032917211 XP_032773102 UDP-glucose:glycoprotein glucosyltransferase 2 protein-coding 626122908 LOC116897492 small nucleolar RNA SNORD45 3 7542190 7542260 + 116897492 MODEL JAAIVD010000012;XR_004387513 snorna 626122911 LOC116898172 40S ribosomal protein S28-like 4 125203470 125203679 + 116898172 MODEL JAAIVD010000003 pseudo 626122912 LOC116889939 olfactory receptor 6C6-like 1 161173890 161174833 + 116889939 MODEL JAAIVD010000025 pseudo 626122913 Wdr20 WD repeat domain 20 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); papillary thyroid carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 128305438 128373700 + 22301074 116905478 MODEL JAAIVD010000026;XM_032908448;XM_032908449;XM_032908451;XM_032908452;XM_032908453;XM_032908454;XM_032908455;XM_032908456 XP_032764339;XP_032764340;XP_032764342;XP_032764343;XP_032764344;XP_032764345;XP_032764346;XP_032764347 WD repeat-containing protein 20 protein-coding 626122942 LOC116893272 NACHT, LRR and PYD domains-containing protein 4B-like 2 143830493 143839919 - 116893272 MODEL JAAIVD010000001 pseudo 626122943 LOC116890220 gamma-secretase subunit APH-1A-like 1 263907861 263908608 - 22301074;30032202 116890220 MODEL JAAIVD010000025;XM_032890957 XP_032746848 protein-coding 626122946 LOC116908050 translationally-controlled tumor protein-like 8 76977627 76978089 + 116908050 MODEL JAAIVD010000027 pseudo 626122947 LOC116888095 60S acidic ribosomal protein P0-like X 96687523 96688445 + 116888095 MODEL JAAIVD010000014 pseudo 626122948 Garre1 granule associated Rac and RHOG effector 1 ENCODES a protein that exhibits CCR4-NOT complex binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Rac protein signal transduction (ortholog); FOUND IN P-body (ortholog) 2 164370341 164448532 + 30032202 116892281 MODEL JAAIVD010000001;XM_032893875;XM_032893877;XM_032893878 XP_032749766;XP_032749768;XP_032749769 uncharacterized protein KIAA0355 homolog protein-coding 626122972 LOC116908779 meiosis regulator and mRNA stability factor 1-like 9 8823930 8829676 + 116908779 MODEL JAAIVD010000002;XM_032912151 XP_032768042 protein-coding 626122981 LOC116893179 tripartite motif-containing protein 30A-like 2 103487582 103505626 - 22301074 116893179 MODEL JAAIVD010000001;XM_032895084 XP_032750975 protein-coding 626122988 Tnfaip6 TNF alpha induced protein 6 ENCODES a protein that exhibits calcium ion binding (ortholog); carboxylesterase activity (ortholog); fibronectin binding (ortholog); INVOLVED IN fibronectin fibril organization (ortholog); hyaluronan metabolic process (ortholog); negative regulation of BMP signaling pathway (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); allergic contact dermatitis (ortholog); Arsenic Poisoning (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 5 29818207 29837686 + 22301074;30032202 116900169 MODEL JAAIVD010000023;XM_032901929 XP_032757820 tumor necrosis factor-inducible gene 6 protein protein-coding 626122998 Slc25a3 solute carrier family 25 member 3 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH Mitochondrial Phosphate Carrier Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 1 170191603 170198915 - 30032202 116908079 MODEL JAAIVD010000025;XM_032911359 XP_032767250 phosphate carrier protein, mitochondrial protein-coding 626123010 LOC116897074 zinc finger protein 91-like 3 156825639 156833060 + 30032202 116897074 MODEL JAAIVD010000012;XM_032898700 XP_032754591 protein-coding 626123016 Trnag-ccc transfer RNA glycine (anticodon CCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60970030 60970100 - 116897695 MODEL JAAIVD010000012 trna 626123017 Selp selectin P ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein binding (ortholog); fucose binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); cell-cell adhesion (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acute necrotizing pancreatitis (ortholog); allergic disease (ortholog); Alzheimer's disease (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog); membrane (ortholog) 10 43352181 43387085 + 22301074;30032202 116911349 MODEL JAAIVD010000005;XM_032915269 XP_032771160 P-selectin protein-coding 626123037 LOC116907921 solute carrier family 22 member 13-like 8 110457945 110462632 - 22301074 116907921 MODEL JAAIVD010000027;XM_032911132 XP_032767023 protein-coding 626123050 LOC116897935 olfactory receptor 186 4 42889844 42890773 - 22301074;30032202 116897935 MODEL JAAIVD010000003;XM_032899334 XP_032755225 protein-coding 626123053 Rassf9 Ras association domain family member 9 ENCODES a protein that exhibits enzyme binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN intracellular transport (ortholog); FOUND IN cytosol (ortholog); endosome (ortholog); recycling endosome (ortholog) 1 180926013 180927927 + 22301074 116913815 MODEL JAAIVD010000025;XM_032918151 XP_032774042 ras association domain-containing protein 9 protein-coding 626123058 Pld4 phospholipase D family member 4 ENCODES a protein that exhibits phospholipase D activity (ortholog); single-stranded DNA 5'-3' DNA exonuclease activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); hematopoietic progenitor cell differentiation (ortholog); phagocytosis (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Mycoplasma pneumoniae pneumonia (ortholog); rheumatoid arthritis (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 130349819 130358386 + 22301074;30032202 116905519 MODEL JAAIVD010000026;XM_032908542 XP_032764433 phospholipase D4 protein-coding 626123073 Tmprss13 transmembrane serine protease 13 INVOLVED IN establishment of skin barrier (ortholog) 8 39849888 39876637 + 22301074 116907058 MODEL JAAIVD010000027;XM_032910012;XM_032910013 XP_032765903;XP_032765904 transmembrane protease serine 13 protein-coding 626123090 LOC116895473 60S ribosomal protein L36a-like 3 90161926 90162358 + 116895473 MODEL JAAIVD010000012 pseudo 626123091 Reep4 receptor accessory protein 4 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); FOUND IN endoplasmic reticulum (ortholog) 12 53804544 53808346 - 30032202 116913347 MODEL JAAIVD010000007;XM_032917499 XP_032773390 receptor expression-enhancing protein 4 protein-coding 626123103 LOC116911962 collagen alpha-2(I) chain-like 11 22753736 22840370 + 116911962 MODEL JAAIVD010000006;XM_032915887 XP_032771778 protein-coding 626123114 Fxyd2 FXYD domain containing ion transport regulator 2 ENCODES a protein that exhibits ATPase activator activity (ortholog); protein-macromolecule adaptor activity (ortholog); sodium channel regulator activity (ortholog); INVOLVED IN cellular hyperosmotic salinity response (ortholog); inorganic cation transmembrane transport (ortholog); intracellular potassium ion homeostasis (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; alfentanil pharmacodynamics pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hypertension (ortholog); primary hypomagnesemia (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); sodium:potassium-exchanging ATPase complex (ortholog) 8 39937302 39944330 + 22301074;30032202 116907321 MODEL JAAIVD010000027;XM_032910267;XM_032910268 XP_032766158;XP_032766159 sodium/potassium-transporting ATPase subunit gamma protein-coding 626123127 Akr1d1 aldo-keto reductase family 1 member D1 ENCODES a protein that exhibits 3-oxo-5-beta-steroid 4-dehydrogenase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); bile acid biosynthetic process (ortholog); C21-steroid hormone metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH congenital bile acid synthesis defect (ortholog); congenital bile acid synthesis defect 2 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog) 6 102309446 102347937 - 22301074;30032202 116902891 MODEL JAAIVD010000024;XM_032905220;XM_032905221 XP_032761111;XP_032761112 protein-coding 626123139 Actn4 actinin alpha 4 ENCODES a protein that exhibits actin filament binding (ortholog); chromatin DNA binding (ortholog); nuclear receptor binding (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); bicellular tight junction assembly (ortholog); gene expression (ortholog); PARTICIPATES IN platelet-derived growth factor signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cytoskeleton (ortholog); cell-cell junction (ortholog); cortical actin cytoskeleton (ortholog) 2 167039350 167108681 + 22301074;30032202 116892367 MODEL JAAIVD010000001;XM_032894026;XM_032894027;XM_032894028;XM_032894029;XM_032894030 XP_032749917;XP_032749918;XP_032749919;XP_032749920;XP_032749921 alpha-actinin-4 protein-coding 626123174 Slc6a16 solute carrier family 6 member 16 2 154273792 154290282 - 22301074;30032202 116893326 MODEL JAAIVD010000001;XM_032895144 XP_032751035 orphan sodium- and chloride-dependent neurotransmitter transporter NTT5 protein-coding 626123188 LOC116895124 U4 spliceosomal RNA 2 40578633 40578747 + 116895124 MODEL JAAIVD010000001 pseudo 626123189 Tdrd15 tudor domain containing 15 7 28242769 28248807 - 116905642 MODEL JAAIVD010000026;XM_032908618 XP_032764509 tudor domain-containing protein 15 protein-coding 626123192 LOC116890109 40S ribosomal protein S12-like 1 234219305 234219726 - 116890109 MODEL JAAIVD010000025 pseudo 626123193 LOC116888738 uncharacterized protein C10orf143 homolog X 52635971 52646026 + 116888738 MODEL JAAIVD010000014 pseudo 626123194 LOC116887787 small nucleolar RNA SNORA9 18 9169225 9169357 + 116887787 MODEL JAAIVD010000013;XR_004386283 snorna 626123197 Cenpe centromere protein E ENCODES a protein that exhibits kinetochore binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); attachment of spindle microtubules to kinetochore (ortholog); chromosome segregation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); hepatocellular carcinoma (ortholog); primary autosomal recessive microcephaly 13 (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome, centromeric region (ortholog) 3 23819505 23877083 - 22301074;30032202 116896227 MODEL JAAIVD010000012;XM_032897283 XP_032753174 centromere-associated protein E protein-coding 626123246 LOC116888256 probable G-protein coupled receptor 83 X 54066669 54072171 - 22301074;30032202 116888256 MODEL JAAIVD010000014;XM_032889539 XP_032745430 protein-coding 626123254 Prmt5 protein arginine methyltransferase 5 ENCODES a protein that exhibits chromatin binding (ortholog); E-box binding (ortholog); histone H2AR3 methyltransferase activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); circadian regulation of gene expression (ortholog); DNA-templated transcription termination (ortholog); PARTICIPATES IN histone modification pathway; homocysteine metabolic pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH asthma (ortholog); Cocaine-Related Disorders (ortholog); diffuse large B-cell lymphoma (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 12 70480303 70489531 + 22301074;30032202 116913626 MODEL JAAIVD010000007;XM_032917893 XP_032773784 protein arginine N-methyltransferase 5 protein-coding 626123275 Hcn4 hyperpolarization activated cyclic nucleotide gated potassium channel 4 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly cAMP-activated cation channel activity (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN cellular response to aldosterone (ortholog); cellular response to cAMP (ortholog); cellular response to cGMP (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); Brugada syndrome (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); HCN channel complex (ortholog) 8 52683812 52723504 + 22301074 116907166 MODEL JAAIVD010000027;XM_032910122 XP_032766013 potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 protein-coding 626123287 Adm2 adrenomedullin 2 ENCODES a protein that exhibits hormone activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adrenomedullin receptor signaling pathway (ortholog); angiogenesis (ortholog); ASSOCIATED WITH Myocardial Ischemia (ortholog); phlebitis (ortholog); vascular disease (ortholog); FOUND IN extracellular space (ortholog) 1 258625200 258626939 + 30032202 116890171 MODEL JAAIVD010000025;XM_032890906 XP_032746797 protein ADM2 protein-coding 626123294 LOC116888504 farnesyl pyrophosphate synthase-like X 19278759 19279852 + 30032202 116888504 MODEL JAAIVD010000014;XM_032889795 XP_032745686 protein-coding 626123298 LOC116884702 protocadherin beta-6-like 15 1032682 1036846 + 22301074 116884702 MODEL JAAIVD010000010;XM_032885890 XP_032741781 protein-coding 626123303 Sncb synuclein beta ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); calcium ion binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); dopamine metabolic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); Alzheimer's disease (ortholog); Brain Injuries (ortholog); FOUND IN axon terminus (ortholog); growth cone (ortholog); inclusion body (ortholog) 14 73102206 73110343 - 22301074;30032202 116883641 MODEL JAAIVD010000009;XM_032884830 XP_032740721 beta-synuclein protein-coding 626123313 LOC116894126 olfactory receptor 52N2 2 103867331 103868287 - 22301074 116894126 MODEL JAAIVD010000001;XM_032895844 XP_032751735 protein-coding 626123316 LOC116913904 protein transport protein Sec61 subunit gamma-like 12 12258493 12258719 + 116913904 MODEL JAAIVD010000007 pseudo 626123317 LOC116901663 ribosomal RNA-processing protein 8-like 5 74522105 74524071 + 116901663 MODEL JAAIVD010000023 pseudo 626123318 LOC116893505 igE-binding protein-like 2 186328095 186329818 - 22301074 116893505 MODEL JAAIVD010000001;XM_032895244 XP_032751135 protein-coding 626123322 Pip4k2b phosphatidylinositol-5-phosphate 4-kinase type 2 beta ENCODES a protein that exhibits 1-phosphatidylinositol-4-phosphate 5-kinase activity (ortholog); ATP binding (ortholog); GTP binding (ortholog); INVOLVED IN 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate biosynthetic process (ortholog); autophagosome-lysosome fusion (ortholog); negative regulation of insulin receptor signaling pathway (ortholog); ASSOCIATED WITH hereditary neutrophilia (ortholog); FOUND IN autophagosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 56641108 56671590 + 22301074 116908800 MODEL JAAIVD010000002;XM_032912202 XP_032768093 phosphatidylinositol 5-phosphate 4-kinase type-2 beta protein-coding 626123336 LOC116909225 uncharacterized LOC116909225 9 8810230 8813220 + 116909225 MODEL JAAIVD010000002;XM_032912726 XP_032768617 uncharacterized protein LOC116909225 protein-coding 626123341 LOC116883997 uncharacterized LOC116883997 14 70510851 70524762 + 116883997 MODEL JAAIVD010000009;XR_004385808;XR_004385809 ncrna 626123350 Pard3 par-3 family cell polarity regulator ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN apical constriction (ortholog); bicellular tight junction assembly (ortholog); centrosome localization (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); neural tube defect (ortholog); primary ovarian insufficiency (ortholog); FOUND IN adherens junction (ortholog); apical junction complex (ortholog); axonal growth cone (ortholog) 17 46593159 47139404 + 22301074;30032202 116886273 MODEL JAAIVD010000011;XM_032887697 XP_032743588 partitioning defective 3 homolog protein-coding 626123379 LOC116883734 uncharacterized LOC116883734 14 52026224 52030197 - 116883734 MODEL JAAIVD010000009;XR_004385779 ncrna 626123383 Tiparp TCDD inducible poly(ADP-ribose) polymerase ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN androgen metabolic process (ortholog); estrogen metabolic process (ortholog); face morphogenesis (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Ovarian Neoplasms (ortholog); FOUND IN nucleus (ortholog) 3 90168701 90195002 - 22301074 116896813 MODEL JAAIVD010000012;XM_032898289 XP_032754180 protein mono-ADP-ribosyltransferase TIPARP protein-coding 626123393 Prmt1 protein arginine methyltransferase 1 ENCODES a protein that exhibits enzyme binding (ortholog); GATOR1 complex binding (ortholog); histone H4R3 methyltransferase activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cardiac muscle tissue development (ortholog); cellular response to amino acid starvation (ortholog); PARTICIPATES IN androgen signaling pathway; estrogen signaling pathway; histone modification pathway; ASSOCIATED WITH asthma (ortholog); cleft palate (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 2 154558695 154568650 + 22301074;30032202 116892180 MODEL JAAIVD010000001;XM_032893694;XM_032893695;XM_032893697;XM_032893698 XP_032749585;XP_032749586;XP_032749588;XP_032749589 protein arginine N-methyltransferase 1 protein-coding 626123418 LOC116908230 olfactory receptor 150-like 8 82698593 82699534 + 22301074;30032202 116908230 MODEL JAAIVD010000027;XM_032911494 XP_032767385 protein-coding 626123421 LOC116894927 small nucleolar RNA SNORD31 2 9215304 9215370 - 116894927 MODEL JAAIVD010000001;XR_004387126 snorna 626123424 LOC116899857 small nucleolar RNA SNORA17 4 68790249 68790380 + 116899857 MODEL JAAIVD010000003;XR_004387853 snorna 626123427 LOC116883172 aldo-keto reductase family 1 member C13 14 18534287 18547163 - 30032202 116883172 MODEL JAAIVD010000009;XM_032884207 XP_032740098 protein-coding 626123440 Gpc1 glypican 1 ENCODES a protein that exhibits collagen V binding (ortholog); copper ion binding (ortholog); fibroblast growth factor binding (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); myelin assembly (ortholog); negative regulation of fibroblast growth factor receptor signaling pathway (ortholog); PARTICIPATES IN glypican signaling pathway; Hedgehog signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog); membrane raft (ortholog) 4 164789951 164817852 + 22301074;30032202 116899648 MODEL JAAIVD010000003;XM_032901657 XP_032757548 glypican-1 protein-coding 626123453 LOC116913243 smad nuclear interacting protein 1-like 12 78066178 78067236 + 116913243 MODEL JAAIVD010000007 pseudo 626123454 LOC116900374 olfactory receptor 5W2-like 5 69489556 69490503 + 22301074;30032202 116900374 MODEL JAAIVD010000023;XM_032902122 XP_032758013 protein-coding 626123458 LOC116913368 tripartite motif-containing protein 52-like 12 18812222 18813973 - 116913368 MODEL JAAIVD010000007;XM_032917532 XP_032773423 protein-coding 626123465 LOC116900449 olfactory receptor 4C15-like 5 71016019 71016954 + 22301074 116900449 MODEL JAAIVD010000023;XM_032902190 XP_032758081 protein-coding 626123468 Tmem144 transmembrane protein 144 3 73554921 73586053 + 30032202 116896758 MODEL JAAIVD010000012;XM_032898204 XP_032754095 protein-coding 626123484 LOC116889606 sex-determining region Y protein-like Y 1764773 1765275 + 116889606 MODEL JAAIVD010000015 pseudo 626123485 Hoxa1 homeobox A1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN abducens nerve formation (ortholog); anatomical structure formation involved in morphogenesis (ortholog); anatomical structure morphogenesis (ortholog); ASSOCIATED WITH Athabaskan brainstem dysgenesis syndrome (ortholog); autistic disorder (ortholog); congenital heart disease (ortholog) 6 88904320 88906142 + 22301074;30032202 116902832 MODEL JAAIVD010000024;XM_032905164;XM_032905165 XP_032761055;XP_032761056 homeobox protein Hox-A1 protein-coding 626123495 LOC116889747 olfactory receptor 10A5-like 116889747 MODEL JAAIVD010000077 pseudo 626123496 LOC116912537 vomeronasal type-2 receptor 116-like 11 19402658 19403558 - 116912537 MODEL JAAIVD010000006 pseudo 626123497 Pitrm1 pitrilysin metallopeptidase 1 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 30 (ortholog); cerebellar ataxia (ortholog); nicotine dependence (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 14 20485158 20516247 + 22301074;30032202 116883649 MODEL JAAIVD010000009;XM_032884843 XP_032740734 presequence protease, mitochondrial protein-coding 626123528 Angpt1 angiopoietin 1 ENCODES a protein that exhibits identical protein binding (ortholog); receptor ligand activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN activation of transmembrane receptor protein tyrosine kinase activity (ortholog); angiogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); brain ischemia (ortholog); diabetic retinopathy (ortholog); FOUND IN extracellular space (ortholog); membrane raft (ortholog); microvillus (ortholog) 1 217083735 217322914 - 30032202 116911087 MODEL JAAIVD010000025;XM_032914899;XM_032914910 XP_032770790;XP_032770801 angiopoietin-1 protein-coding 626123545 Snw1 SNW domain containing 1 ENCODES a protein that exhibits enzyme binding (ortholog); Notch binding (ortholog); nuclear androgen receptor binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); host-mediated activation of viral transcription (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Brain Injuries (ortholog); breast cancer (ortholog); breast carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromatin (ortholog); cyclin/CDK positive transcription elongation factor complex (ortholog) 7 101548473 101575841 - 22301074;30032202 116905325 MODEL JAAIVD010000026;XM_032908217;XM_032908218 XP_032764108;XP_032764109 SNW domain-containing protein 1 protein-coding 626123568 Zfand3 zinc finger AN1-type containing 3 ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); type 2 diabetes mellitus (ortholog) 18 3664330 3855619 - 22301074 116887031 MODEL JAAIVD010000013;XM_032888523 XP_032744414 AN1-type zinc finger protein 3 protein-coding 626123578 Azi2 5-azacytidine induced 2 INVOLVED IN dendritic cell differentiation (ortholog); dendritic cell proliferation (ortholog); mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog) 8 109304441 109328952 + 30032202 116907885 MODEL JAAIVD010000027;XM_032911073 XP_032766964 5-azacytidine-induced protein 2 protein-coding 626123590 B3galt6 beta-1,3-galactosyltransferase 6 ENCODES a protein that exhibits galactosylxylosylprotein 3-beta-galactosyltransferase activity (ortholog); UDP-galactosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); ASSOCIATED WITH Al-Gazali Syndrome (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 1 (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi medial cisterna (ortholog) 1 4660408 4661981 + 22301074;30032202 116891603 MODEL JAAIVD010000025;XM_032892801 XP_032748692 protein-coding 626123595 Appl1 adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 ENCODES a protein that exhibits beta-tubulin binding (ortholog); identical protein binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); cellular response to hepatocyte growth factor stimulus (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); maturity-onset diabetes of the young type 14 (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 13 2667148 2708894 - 22301074;30032202 116914223 MODEL JAAIVD010000008;XM_032918418 XP_032774309 DCC-interacting protein 13-alpha protein-coding 626123621 LOC116904127 40S ribosomal protein S15a-like 6 137488082 137488553 - 116904127 MODEL JAAIVD010000024 pseudo 626123622 Rasgrp3 RAS guanyl releasing protein 3 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); kinase binding (ortholog); INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); hypertension (ortholog); systemic lupus erythematosus (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog); perinuclear region of cytoplasm (ortholog) 7 17768127 17829718 - 22301074;30032202 116905919 MODEL JAAIVD010000026;XM_032908908 XP_032764799 ras guanyl-releasing protein 3 protein-coding 626123643 Gnrh1 gonadotropin releasing hormone 1 ENCODES a protein that exhibits gonadotropin hormone-releasing hormone activity (ortholog); INVOLVED IN estrous cycle (ortholog); female pregnancy (ortholog); male sex determination (ortholog); ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); adult respiratory distress syndrome (ortholog); amenorrhea (ortholog); FOUND IN axon terminus (ortholog); cytoplasmic side of rough endoplasmic reticulum membrane (ortholog); dendrite (ortholog) 12 56728147 56732756 - 22301074 116913959 MODEL JAAIVD010000007;X62651;XM_032918228;XM_032918229 XP_032774119;XP_032774120 progonadoliberin-1 protein-coding 626123654 Arhgef10l Rho guanine nucleotide exchange factor 10 like ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN positive regulation of stress fiber assembly (ortholog); SREBP signaling pathway (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); ovarian endometrial cancer (ortholog); ovarian serous carcinoma (ortholog); FOUND IN cytosol (ortholog) 1 17544062 17647381 + 22301074;30032202 116893584 MODEL JAAIVD010000025;XM_032895286;XM_032895291;XM_032895300;XM_032895308 XP_032751177;XP_032751182;XP_032751191;XP_032751199 rho guanine nucleotide exchange factor 10-like protein protein-coding 626123693 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 862789 862860 - 116910824 MODEL JAAIVD010000002 trna 626123694 LOC116885727 phosphoglycerate mutase 1-like 1 1177147 1177902 + 116885727 MODEL JAAIVD010000025 pseudo 626123695 LOC116898559 WASH complex subunit 1-like 4 154936969 154948232 - 30032202 116898559 MODEL JAAIVD010000003;XM_032899767 XP_032755658 protein-coding 626123706 LOC116902143 polycomb group protein ASXL1 5 132686933 132729775 + 22301074;30032202 116902143 MODEL JAAIVD010000023;XM_032904472 XP_032760363 protein-coding 626123721 LOC116914141 small nucleolar RNA SNORA17 12 7631336 7631442 - 116914141 MODEL JAAIVD010000007 pseudo 626123722 LOC116904811 U6 spliceosomal RNA 6 155626696 155626802 - 116904811 MODEL JAAIVD010000024;XR_004388462 snrna 626123725 P3h3 prolyl 3-hydroxylase 3 INVOLVED IN collagen biosynthetic process (ortholog); negative regulation of cell population proliferation (ortholog); peptidyl-lysine hydroxylation (ortholog); ASSOCIATED WITH osteoarthritis (ortholog); FOUND IN catalytic complex (ortholog) 6 23034617 23050844 + 22301074;30032202 116903270 MODEL JAAIVD010000024;XM_032905684;XR_004388264 XP_032761575 protein-coding 626123747 Cc2d1a coiled-coil and C2 domain containing 1A ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN apical dendrite arborization (ortholog); dendrite arborization (ortholog); endosome organization (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 3 (ortholog); ciliopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN ciliary basal body (ortholog); cytosol (ortholog); endosome membrane (ortholog) 17 16139960 16155075 + 30032202 116886106 MODEL JAAIVD010000011;XM_032887436;XM_032887437;XM_032887438 XP_032743327;XP_032743328;XP_032743329 coiled-coil and C2 domain-containing protein 1A protein-coding 626123785 Krt1 keratin 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); protein heterodimerization activity (ortholog); structural constituent of skin epidermis (ortholog); INVOLVED IN complement activation, lectin pathway (ortholog); establishment of skin barrier (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH Annular Epidermolytic Ichthyosis (ortholog); Annular Epidermolytic Ichthyosis 1 (ortholog); Annular Epidermolytic Ichthyosis 2 (ortholog); FOUND IN cornified envelope (ortholog); cytoplasm (ortholog); keratin filament (ortholog) 1 261225963 261231244 + 22301074;30032202 116890205 MODEL JAAIVD010000025;XM_032890939 XP_032746830 keratin, type II cytoskeletal 1 protein-coding 626123798 LOC116894157 olfactory receptor 2AG2-like 2 104944535 104945485 + 22301074 116894157 MODEL JAAIVD010000001;XM_032895874 XP_032751765 protein-coding 626123801 LOC116897938 olfactory receptor 187-like 4 42936962 42937897 - 22301074;30032202 116897938 MODEL JAAIVD010000003;XM_032899338 XP_032755229 protein-coding 626123805 Hormad1 HORMA domain containing 1 INVOLVED IN blastocyst development (ortholog); homologous chromosome pairing at meiosis (ortholog); meiotic cell cycle (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); cytoplasm (ortholog) 3 61684364 61714445 - 116896544 MODEL JAAIVD010000012;XM_032897734 XP_032753625 HORMA domain-containing protein 1 protein-coding 626123824 C2cd4b C2 calcium dependent domain containing 4B INVOLVED IN positive regulation of acute inflammatory response (ortholog); regulation of cell adhesion (ortholog); regulation of vascular permeability involved in acute inflammatory response (ortholog); ASSOCIATED WITH megacolon (ortholog); type 2 diabetes mellitus (ortholog) 8 62126794 62128381 + 116907269 MODEL JAAIVD010000027;XM_032910224 XP_032766115 C2 calcium-dependent domain-containing protein 4B protein-coding 626123830 LOC116889794 G2/mitotic-specific cyclin-B1-like 116889794 MODEL JAAIVD010000502 pseudo 626123831 LOC116900510 uncharacterized LOC116900510 5 78237189 78267516 - 116900510 MODEL JAAIVD010000023 pseudo 626123832 Pkd2 polycystin 2, transient receptor potential cation channel ENCODES a protein that exhibits actinin binding (ortholog); alpha-actinin binding (ortholog); ATPase binding (ortholog); INVOLVED IN aorta development (ortholog); branching involved in ureteric bud morphogenesis (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); autosomal dominant polycystic kidney disease (ortholog); autosomal recessive polycystic kidney disease (ortholog); FOUND IN basal cortex (ortholog); basal plasma membrane (ortholog); cation channel complex (ortholog) 11 14517532 14560551 + 22301074;30032202 116912192 MODEL JAAIVD010000006;XM_032916126 XP_032772017 polycystin-2 protein-coding 626123851 Fgf9 fibroblast growth factor 9 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); growth factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell-cell signaling (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); cleft lip (ortholog); cleft palate (ortholog); FOUND IN basement membrane (ortholog); extracellular space (ortholog) 12 66727771 66768882 - 22301074;30032202 116913477 MODEL JAAIVD010000007;XM_032917680 XP_032773571 protein-coding 626123858 Dgcr2 DiGeorge syndrome critical region gene 2 INVOLVED IN cognition (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH DiGeorge syndrome (ortholog); schizophrenia (ortholog); FOUND IN membrane (ortholog) 4 3107949 3158189 - 22301074;30032202 116898653 MODEL JAAIVD010000003;XM_032899884;XM_032899885 XP_032755775;XP_032755776 integral membrane protein DGCR2/IDD protein-coding 626123874 LOC116898322 programmed cell death 6-interacting protein-like 4 41009301 41015230 + 116898322 MODEL JAAIVD010000003 pseudo 626123875 Tk1 thymidine kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); thymidine kinase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN digestive tract development (ortholog); DNA synthesis involved in mitotic DNA replication (ortholog); fetal process involved in parturition (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; mitochondrial neurogastrointestinal encephalopathy syndrome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); breast cancer (ortholog); cervix carcinoma (ortholog) 9 66240041 66251233 + 22301074;30032202 116908869 MODEL JAAIVD010000002;XM_032912310 XP_032768201 thymidine kinase, cytosolic protein-coding 626123886 LOC116913851 60S ribosomal protein L21-like 12 65585658 65592716 - 116913851 MODEL JAAIVD010000007 pseudo 626123887 LOC116896721 ETS translocation variant 3 3 66025068 66039379 - 22301074;30032202 116896721 MODEL JAAIVD010000012;XM_032898140 XP_032754031 protein-coding 626123896 LOC116910742 small nucleolar RNA ACA64 9 2006074 2006201 - 116910742 MODEL JAAIVD010000002;XR_004389255 snorna 626123899 LOC116897239 zinc finger protein 69-like 1 36068679 36080961 + 30032202 116897239 MODEL JAAIVD010000025;XM_032898972 XP_032754863 protein-coding 626123907 Znf174 zinc finger protein 174 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); protein homodimerization activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); FOUND IN fibrillar center (ortholog); nuclear body (ortholog) 9 17986561 17993117 - 116909997 MODEL JAAIVD010000002;XM_032913782 XP_032769673 protein-coding 626123914 LOC116895200 late cornified envelope protein 1C-like 3 1323062 1323475 + 22301074 116895200 MODEL JAAIVD010000012;XM_032896540 XP_032752431 protein-coding 626123917 Cdh10 cadherin 10 INVOLVED IN synaptic membrane adhesion (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic specialization membrane (ortholog) 3 162603105 162801786 - 22301074;30032202 116897107 MODEL JAAIVD010000012;XM_032898749;XM_032898750;XM_032898751;XM_032898752 XP_032754640;XP_032754641;XP_032754642;XP_032754643 cadherin-10 protein-coding 626123942 Smndc1 survival motor neuron domain containing 1 2 52807680 52818832 - 22301074;30032202 116891284 MODEL JAAIVD010000001;XM_032892188;XM_032892189;XR_004386825 XP_032748079;XP_032748080 survival of motor neuron-related-splicing factor 30 protein-coding 626123958 Prr5 proline rich 5 INVOLVED IN positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); PARTICIPATES IN mTOR signaling pathway; FOUND IN TORC2 complex (ortholog) 1 254058545 254097025 + 30032202 116914564 MODEL JAAIVD010000025;XM_032918921 XP_032774812 proline-rich protein 5 protein-coding 626123971 Fxr2 FMR1 autosomal homolog 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN dentate gyrus development (ortholog); mRNA destabilization (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 49244752 49264641 + 30032202 116908720 MODEL JAAIVD010000002;XM_032912058;XM_032912059 XP_032767949;XP_032767950 fragile X mental retardation syndrome-related protein 2 protein-coding 626123997 LOC116888913 60S ribosomal protein L15-like X 31788269 31788918 - 116888913 MODEL JAAIVD010000014 pseudo 626123998 LOC116899794 U7 small nuclear RNA 4 108891911 108891974 - 116899794 MODEL JAAIVD010000003;XR_004387799 snrna 626124001 LOC116889693 30S ribosomal protein S7-like 22301074;30032202 116889693 MODEL JAAIVD010000052;XM_032890580 XP_032746471 protein-coding 626124002 Cdh5 cadherin 5 ENCODES a protein that exhibits beta-catenin binding (ortholog); BMP receptor binding (ortholog); cell-cell adhesion mediator activity (ortholog); INVOLVED IN adherens junction organization (ortholog); bicellular tight junction assembly (ortholog); blood vessel endothelial cell migration (ortholog); PARTICIPATES IN sphingosine 1-phosphate signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); coronary artery disease (ortholog); FOUND IN adherens junction (ortholog); bicellular tight junction (ortholog); cell junction (ortholog) 17 12406995 12444724 + 22301074;30032202 116886499 MODEL JAAIVD010000011;XM_032888002 XP_032743893 cadherin-5 protein-coding 626124018 Tprn taperin ENCODES a protein that exhibits actin binding (ortholog); protein phosphatase 1 binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); sensory perception of sound (ortholog); stereocilium maintenance (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 79 (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); microvillus (ortholog); nucleoplasm (ortholog) 5 11914023 11922173 - 22301074;30032202 116901313 MODEL JAAIVD010000023;XM_032903123 XP_032759014 protein-coding 626124026 LOC116894646 vomeronasal type-2 receptor 26-like 2 199450704 199508553 + 22301074;30032202 116894646 MODEL JAAIVD010000001;XM_032896358 XP_032752249 protein-coding 626124035 Lin37 lin-37 DREAM MuvB core complex component ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN G0 to G1 transition (ortholog); gene expression (ortholog) 2 165450125 165454302 + 22301074;30032202 116892312 MODEL JAAIVD010000001;XM_032893933;XM_032893934 XP_032749824;XP_032749825 protein lin-37 homolog protein-coding 626124051 Inhbb inhibin subunit beta B ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); cellular response to calcium ion (ortholog); cellular response to cAMP (ortholog); ASSOCIATED WITH Brain Death (ortholog); congenital hypothyroidism (ortholog); familial male-limited precocious puberty (ortholog); FOUND IN cell periphery (ortholog); extracellular space (ortholog); perinuclear region of cytoplasm (ortholog) 10 11996019 12001651 - 22301074;30032202 116911655 MODEL JAAIVD010000005;XM_032915610 XP_032771501 inhibin beta B chain protein-coding 626124056 Fbxl17 F-box and leucine rich repeat protein 17 INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein polyubiquitination (ortholog); protein quality control for misfolded or incompletely synthesized proteins (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 173223095 173646564 - 22301074;30032202 116899690 MODEL JAAIVD010000003;XM_032901713 XP_032757604 F-box/LRR-repeat protein 17 protein-coding 626124069 LOC116901405 eukaryotic translation initiation factor 4E-binding protein 1 5 30302333 30302808 + 22301074;30032202 116901405 MODEL JAAIVD010000023;XM_032903281 XP_032759172 protein-coding 626124074 LOC116913986 zinc finger CCHC domain-containing protein 9-like 12 4791681 4792563 + 116913986 MODEL JAAIVD010000007 pseudo 626124075 Exoc2 exocyst complex component 2 ENCODES a protein that exhibits protein kinase binding (ortholog); small GTPase binding (ortholog); INVOLVED IN Golgi to plasma membrane transport (ortholog); regulation of entry of bacterium into host cell (ortholog); vesicle docking involved in exocytosis (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH DYSMORPHIC FACIES AND CEREBELLAR HYPOPLASIA (ortholog); prostate cancer (ortholog); FOUND IN exocyst (ortholog) 14 49846536 49980173 - 30032202 116883834 MODEL JAAIVD010000009;XM_032885095;XM_032885096;XM_032885097 XP_032740986;XP_032740987;XP_032740988 protein-coding 626124113 Ticam2 toll like receptor adaptor molecule 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phospholipid binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to virus (ortholog); negative regulation of chemokine (C-C motif) ligand 5 production (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Brain Injuries (ortholog); Coronavirus infectious disease (ortholog); severe acute respiratory syndrome (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endosome (ortholog) 15 40484293 40485926 + 30032202 116884911 MODEL JAAIVD010000010;XM_032886134 XP_032742025 TIR domain-containing adapter molecule 2 protein-coding 626124117 LOC116909186 39S ribosomal protein L23, mitochondrial-like 9 82010291 82010814 + 22301074;30032202 116909186 MODEL JAAIVD010000002;XM_032912677 XP_032768568 protein-coding 626124121 Creb5 cAMP responsive element binding protein 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN adipose tissue development (ortholog); fat cell differentiation (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); basal cell carcinoma (ortholog); Habitual Abortions (ortholog); FOUND IN nucleus (ortholog) 6 87383181 87693858 - 30032202 116903778 MODEL JAAIVD010000024;XM_032906469 XP_032762360 cyclic AMP-responsive element-binding protein 5 protein-coding 626124135 LOC116891772 ubiquitin-conjugating enzyme E2 R2 1 4371498 4989875 - 30032202 116891772 MODEL JAAIVD010000025;XM_032893106 XP_032748997 protein-coding 626124143 LOC116894936 5S ribosomal RNA 2 74263681 74263799 - 116894936 MODEL JAAIVD010000001 pseudo 626124144 Gpd1l glycerol-3-phosphate dehydrogenase 1 like ENCODES a protein that exhibits sodium channel regulator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN NAD+ metabolic process (ortholog); positive regulation of protein localization to cell surface (ortholog); positive regulation of sodium ion transport (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Brugada syndrome 2 (ortholog); cardiomyopathy (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 8 105510241 105541818 - 22301074;30032202 116907836 MODEL JAAIVD010000027;XM_032911020 XP_032766911 glycerol-3-phosphate dehydrogenase 1-like protein protein-coding 626124156 LOC116893984 ras GTPase-activating protein-binding protein 1-like 2 101374906 101376206 - 116893984 MODEL JAAIVD010000001 pseudo 626124157 LOC116894505 zinc finger protein 541 2 173138032 173149590 + 30032202 116894505 MODEL JAAIVD010000001;XM_032896210 XP_032752101 protein-coding 626124166 LOC116890255 uncharacterized LOC116890255 1 10696898 10712104 - 116890255 MODEL JAAIVD010000025;XM_032890981 XP_032746872 uncharacterized protein LOC116890255 protein-coding 626124174 Idh1 isocitrate dehydrogenase (NADP(+)) 1 ENCODES a protein that exhibits identical protein binding (ortholog); isocitrate dehydrogenase (NADP+) activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 2-oxoglutarate metabolic process (ortholog); female gonad development (ortholog); glutathione metabolic process (ortholog); ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 4 139034036 139055614 - 22301074;30032202 116899461 MODEL JAAIVD010000003;XM_032901245;XM_032901246 XP_032757136;XP_032757137 isocitrate dehydrogenase [NADP] cytoplasmic protein-coding 626124192 LOC116900821 glutamine amidotransferase-like class 1 domain-containing protein 1 5 42105435 42106025 - 116900821 MODEL JAAIVD010000023 pseudo 626124193 LOC116887777 small nucleolar RNA SNORD48 18 7547433 7547496 - 116887777 MODEL JAAIVD010000013;XR_004386274 snorna 626124196 LOC116887311 olfactory receptor 2B11-like 18 11007255 11008194 + 22301074 116887311 MODEL JAAIVD010000013;XM_032888893 XP_032744784 protein-coding 626124199 LOC116885802 cytochrome P450 2W1 ENCODES a protein that exhibits all-trans retinal binding (ortholog); all-trans-retinol binding (ortholog); retinoic acid 4-hydroxylase activity (ortholog); INVOLVED IN aflatoxin metabolic process (ortholog); phospholipid metabolic process (ortholog); retinoic acid catabolic process (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum lumen (ortholog) 16 13842914 13848038 - 22301074;30032202 116885802 MODEL JAAIVD010000004;XM_032887134;XM_032887136 XP_032743025;XP_032743027 protein-coding 626124214 Vip vasoactive intestinal peptide ENCODES a protein that exhibits hormone activity (ortholog); neuropeptide hormone activity (ortholog); peptide hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); innate immune response (ortholog); ASSOCIATED WITH Acute Lung Injury (ortholog); alcohol use disorder (ortholog); Animal Hepatitis (ortholog); FOUND IN extracellular space (ortholog); neuron projection terminus (ortholog); neuronal cell body (ortholog) 2 197189791 197194571 - 22301074;30032202 116892877 MODEL JAAIVD010000001;XM_032894784;XM_032894786;XM_032894787 XP_032750675;XP_032750677;XP_032750678 VIP peptides protein-coding 626124234 LOC116904476 CD2-associated protein-like 6 138900003 138902439 + 116904476 MODEL JAAIVD010000024 pseudo 626124235 Tex264 testis expressed 264, ER-phagy receptor ENCODES a protein that exhibits signaling receptor activity (ortholog); INVOLVED IN protein-DNA covalent cross-linking repair (ortholog); reticulophagy (ortholog); FOUND IN autophagosome membrane (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 8 97953128 97979968 - 30032202 116907497 MODEL JAAIVD010000027;XM_032910490;XM_032910491 XP_032766381;XP_032766382 testis-expressed protein 264 protein-coding 626124248 Soat1 sterol O-acyltransferase 1 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol O-acyltransferase activity (ortholog); fatty-acyl-CoA binding (ortholog); INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH aortic atherosclerosis (ortholog); atherosclerosis (ortholog); Chagas disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 10 35786750 35831851 - 22301074;30032202 116911265 MODEL JAAIVD010000005;XM_032915171 XP_032771062 protein-coding 626124268 LOC116885612 ADP-ribose glycohydrolase ARH3-like 1 209120520 209121843 - 116885612 MODEL JAAIVD010000025 pseudo 626124269 LOC116898407 40S ribosomal protein S29-like 4 84090818 84090988 - 30032202 116898407 MODEL JAAIVD010000003;XM_032899695 XP_032755586 protein-coding 626124272 Dcaf16 DDB1 and CUL4 associated factor 16 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 11 60217520 60217973 + 30032202 116912175 MODEL JAAIVD010000006;XM_032916106 XP_032771997 DDB1- and CUL4-associated factor 16 protein-coding 626124276 Xpnpep3 X-prolyl aminopeptidase 3 ENCODES a protein that exhibits aminopeptidase activity (ortholog); manganese ion binding (ortholog); metalloaminopeptidase activity (ortholog); INVOLVED IN glomerular filtration (ortholog); protein processing (ortholog); proteolysis (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH genetic disease (ortholog); kidney disease (ortholog); nephronophthisis-like nephropathy 1 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 1 251152601 251200989 + 22301074;30032202 116913972 MODEL JAAIVD010000025;XM_032918244 XP_032774135 xaa-Pro aminopeptidase 3 protein-coding 626124290 Shmt2 serine hydroxymethyltransferase 2 ENCODES a protein that exhibits amino acid binding (ortholog); chromatin binding (ortholog); glycine hydroxymethyltransferase activity (ortholog); INVOLVED IN dTMP biosynthetic process (ortholog); formate biosynthetic process (ortholog); glycine biosynthetic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; folate cycle metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); lung non-small cell carcinoma (ortholog); neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities (ortholog); FOUND IN BRISC complex (ortholog); cytoplasm (ortholog); microtubule cytoskeleton (ortholog) 1 205967677 205972777 - 22301074;30032202 116910169 MODEL JAAIVD010000025;XM_032914030;XM_032914038 XP_032769921;XP_032769929 serine hydroxymethyltransferase, mitochondrial protein-coding 626124308 Frzb frizzled related protein ENCODES a protein that exhibits Wnt-protein binding (ortholog); INVOLVED IN cochlea morphogenesis (ortholog); convergent extension involved in organogenesis (ortholog); epithelial cell development (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH lung adenocarcinoma (ortholog); lung non-small cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog) 5 57608263 57640946 - 30032202 116901566 MODEL JAAIVD010000023;XM_032903562 XP_032759453 secreted frizzled-related protein 3 protein-coding 626124318 LOC116901429 uncharacterized LOC116901429 5 36141269 36143484 - 116901429 MODEL JAAIVD010000023;XR_004387991 ncrna 626124322 LOC116885576 60S ribosomal protein L7a-like 1 166122676 166126322 + 116885576 MODEL JAAIVD010000025 pseudo 626124323 Cmpk1 cytidine/uridine monophosphate kinase 1 ENCODES a protein that exhibits CMP kinase activity (ortholog); dUMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); INVOLVED IN dCDP biosynthetic process (ortholog); dUDP biosynthetic process (ortholog); ovulation cycle process (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; gemcitabine pharmacodynamics pathway; gemcitabine pharmacokinetics pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 1 41598225 41625014 + 22301074;30032202 116898809 MODEL JAAIVD010000025;XM_032900164 XP_032756055 UMP-CMP kinase protein-coding 626124333 LOC116888522 60S ribosomal protein L27a-like X 87837546 87838053 + 116888522 MODEL JAAIVD010000014 pseudo 626124334 Rab11fip2 RAB11 family interacting protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); protein kinase binding (ortholog); INVOLVED IN establishment of cell polarity (ortholog); insulin secretion involved in cellular response to glucose stimulus (ortholog); phagocytosis (ortholog); PARTICIPATES IN vasopressin signaling pathway; vasopressin signaling pathway via receptor type 2; FOUND IN endosome (ortholog); nucleoplasm (ortholog); phagocytic cup (ortholog) 2 56188776 56229048 + 30032202 116891310 MODEL JAAIVD010000001;XM_032892223;XM_032892224 XP_032748114;XP_032748115 rab11 family-interacting protein 2 protein-coding 626124347 Cwh43 cell wall biogenesis 43 C-terminal homolog INVOLVED IN brain development (ortholog); cell adhesion (ortholog); cerebrospinal fluid circulation (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); normal pressure hydrocephalus (ortholog) 11 30208117 30252754 + 30032202 116912343 MODEL JAAIVD010000006;XM_032916391 XP_032772282 PGAP2-interacting protein protein-coding 626124366 Rpp25l ribonuclease P/MRP subunit p25 like 1 3838127 3855084 + 30032202 116891321 MODEL JAAIVD010000025;XM_032892244;XR_004386829 XP_032748135 ribonuclease P protein subunit p25-like protein protein-coding 626124374 Snip1 Smad nuclear interacting protein 1 ENCODES a protein that exhibits transcription regulator inhibitor activity (ortholog); INVOLVED IN miRNA processing (ortholog); mRNA splicing, via spliceosome (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH ARTERIAL DISSECTION (ortholog); benign epilepsy with centrotemporal spikes (ortholog); Psychomotor Retardation, Epilepsy, and Craniofacial Dysmorphism (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 33227322 33234660 - 22301074;30032202 116896799 MODEL JAAIVD010000025;XM_032898273 XP_032754164 smad nuclear-interacting protein 1 protein-coding 626124382 Angptl2 angiopoietin like 2 ASSOCIATED WITH dermatomyositis (ortholog) 5 2390849 2420935 - 30032202 116901123 MODEL JAAIVD010000023;XM_032902707 XP_032758598 angiopoietin-related protein 2 protein-coding 626124391 LOC116891178 cartilage acidic protein 1 2 41393363 41432800 - 22301074;30032202 116891178 MODEL JAAIVD010000001;XM_032891993 XP_032747884 protein-coding 626124407 LOC116914532 cytochrome P450 4F3 13 13864029 13892107 - 22301074 116914532 MODEL JAAIVD010000008;XM_032918860 XP_032774751 protein-coding 626124423 LOC116894404 keratin-associated protein 8-1 2 157394403 157394588 - 116894404 MODEL JAAIVD010000001;XM_032896110 XP_032752001 protein-coding 626124426 Atxn1 ataxin 1 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); poly(G) binding (ortholog); INVOLVED IN adult locomotory behavior (ortholog); brain development (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); genetic disease (ortholog); neurodegenerative disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear inclusion body (ortholog) 14 64541414 64828057 - 22301074;30032202 116915213 MODEL JAAIVD010000009;XM_032919589;XM_032919590;XM_032919591;XM_032919592 XP_032775480;XP_032775481;XP_032775482;XP_032775483 ataxin-1 protein-coding 626124442 LOC116901049 vomeromodulin-like 5 133668684 133679834 + 30032202 116901049 MODEL JAAIVD010000023;XM_032902630 XP_032758521 protein-coding 626124458 Rubcnl rubicon like autophagy enhancer ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); phosphatidylinositol-5-phosphate binding (ortholog); INVOLVED IN autophagosome maturation (ortholog); autophagosome-endosome fusion (ortholog); autophagosome-lysosome fusion (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN autophagosome membrane (ortholog) 12 49339581 49358897 - 30032202 116913502 MODEL JAAIVD010000007;XM_032917705 XP_032773596 protein associated with UVRAG as autophagy enhancer protein-coding 626124474 LOC116892796 vomeronasal type-2 receptor 116-like 2 186345467 186351888 + 116892796 MODEL JAAIVD010000001 pseudo 626124475 LOC116910063 cyclin-Q 9 91691369 91692609 + 30032202 116910063 MODEL JAAIVD010000002;XM_032913873 XP_032769764 protein-coding 626124480 LOC116914761 tubulin alpha-1B chain-like 13 42543074 42545262 + 116914761 MODEL JAAIVD010000008 pseudo 626124481 LOC116889572 U6 spliceosomal RNA X 74845331 74845437 - 116889572 MODEL JAAIVD010000014;XR_004386488 snrna 626124484 LOC116908341 U7 small nuclear RNA 8 76640256 76640333 - 116908341 MODEL JAAIVD010000027 pseudo 626124485 Gpr151 G protein-coupled receptor 151 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of synaptic vesicle exocytosis (ortholog); response to acidic pH (ortholog); ASSOCIATED WITH essential tremor (ortholog); FOUND IN cholinergic synapse (ortholog); presynaptic membrane (ortholog); synaptic vesicle membrane (ortholog) 15 3733983 3735745 - 22301074;30032202 116884788 MODEL JAAIVD010000010;XM_032886021 XP_032741912 G-protein coupled receptor 151 protein-coding 626124490 P2rx5 purinergic receptor P2X 5 ENCODES a protein that exhibits ATP binding (ortholog); ATP-gated ion channel activity (ortholog); extracellularly ATP-gated monoatomic cation channel activity (ortholog); INVOLVED IN chloride transport (ortholog); monoatomic cation transmembrane transport (ortholog); positive regulation of calcium ion import across plasma membrane (ortholog); FOUND IN plasma membrane (ortholog) 9 42341344 42352939 - 22301074;30032202 116909769 MODEL JAAIVD010000002;XM_032913456 XP_032769347 P2X purinoceptor 5 protein-coding 626124507 C8H15orf39 chromosome 8 C15orf39 homolog INVOLVED IN negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of inflammatory response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 8 51146716 51156324 - 116907556 MODEL JAAIVD010000027;XM_032910579 XP_032766470 uncharacterized protein C15orf39 homolog protein-coding 626124514 LOC116894643 nucleolin-like 2 199379768 199381812 - 116894643 MODEL JAAIVD010000001 pseudo 626124515 LOC116885841 CD209 antigen-like protein E 16 1870007 1920841 + 116885841 MODEL JAAIVD010000004;XM_032887180 XP_032743071 protein-coding 626124526 Psme3ip1 proteasome activator subunit 3 interacting protein 1 INVOLVED IN negative regulation of proteasomal protein catabolic process (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 17 1469083 1496469 - 30032202 116886519 MODEL JAAIVD010000011;XM_032888030;XM_032888031;XM_032888032 XP_032743921;XP_032743922;XP_032743923 PSME3-interacting protein protein-coding 626124543 LOC116883928 casein kinase I-like 14 8360259 8362017 - 116883928 MODEL JAAIVD010000009 pseudo 626124544 Gosr1 golgi SNAP receptor complex member 1 ENCODES a protein that exhibits SNAP receptor activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde transport, endosome to Golgi (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); membrane (ortholog) 9 95421540 95457346 - 22301074;30032202 116908742 MODEL JAAIVD010000002;XM_032912089;XM_032912090;XM_032912091 XP_032767980;XP_032767981;XP_032767982 protein-coding 626124562 Pik3r2 phosphoinositide-3-kinase regulatory subunit 2 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); phosphotyrosine residue binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); intracellular glucose homeostasis (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; FasL mediated signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH colon cancer (ortholog); Colonic Neoplasms (ortholog); epilepsy (ortholog); FOUND IN focal adhesion (ortholog); nucleus (ortholog); phosphatidylinositol 3-kinase complex, class IA (ortholog) 13 13009782 13018485 - 22301074;30032202 116914512 MODEL JAAIVD010000008;XM_032918836;XM_032918837 XP_032774727;XP_032774728 phosphatidylinositol 3-kinase regulatory subunit beta protein-coding 626124585 Stn1 STN1 subunit of CST complex ENCODES a protein that exhibits single-stranded DNA binding (ortholog); single-stranded telomeric DNA binding (ortholog); telomeric DNA binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); positive regulation of DNA replication (ortholog); telomere maintenance (ortholog); ASSOCIATED WITH Cerebroretinal Microangiopathy with Calcifications and Cysts (ortholog); Cerebroretinal Microangiopathy with Calcifications and Cysts 2 (ortholog); genetic disease (ortholog); FOUND IN chromosome, telomeric region (ortholog); CST complex (ortholog); fibrillar center (ortholog) 2 47034585 47067407 - 22301074;30032202 116891268 MODEL JAAIVD010000001;XM_032892161;XM_032892162 XP_032748052;XP_032748053 CST complex subunit STN1 protein-coding 626124602 LOC116894039 olfactory receptor 52K1-like 2 102396057 102397007 - 22301074 116894039 MODEL JAAIVD010000001;XM_032895759 XP_032751650 protein-coding 626124605 LOC116893937 zinc finger protein 431-like 2 87381332 87381645 - 22301074 116893937 MODEL JAAIVD010000001;XM_032895657 XP_032751548 protein-coding 626124610 Emx2 empty spiracles homeobox 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); brain development (ortholog); cell proliferation in forebrain (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); colorectal cancer (ortholog); esophagus adenocarcinoma (ortholog) 2 56637349 56644688 - 22301074;30032202 116891312 MODEL JAAIVD010000001;XM_032892226;XM_032892227 XP_032748117;XP_032748118 homeobox protein EMX2 protein-coding 626124619 LOC116893128 glyceraldehyde-3-phosphate dehydrogenase-like 2 78290561 78291466 - 116893128 MODEL JAAIVD010000001 pseudo 626124620 Acin1 apoptotic chromatin condensation inducer 1 INVOLVED IN apoptotic chromosome condensation (ortholog); erythrocyte differentiation (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); FOUND IN ASAP complex (ortholog); cytosol (ortholog); exon-exon junction complex (ortholog) 12 70313529 70358491 + 22301074 116913938 MODEL JAAIVD010000007;XM_032918201;XM_032918203;XM_032918204;XM_032918205 XP_032774092;XP_032774094;XP_032774095;XP_032774096 apoptotic chromatin condensation inducer in the nucleus protein-coding 626124648 LOC116913887 protein transport protein Sec61 subunit gamma-like 12 18715122 18715370 + 116913887 MODEL JAAIVD010000007 pseudo 626124649 Fbxo47 F-box protein 47 9 56503179 56529198 + 22301074 116909505 MODEL JAAIVD010000002;XM_032913111;XM_032913112 XP_032769002;XP_032769003 F-box only protein 47 protein-coding 626124665 LOC116894787 migration and invasion enhancer 1-like 2 4884425 4887247 + 116894787 MODEL JAAIVD010000001 pseudo 626124666 Kcnip1 potassium voltage-gated channel interacting protein 1 ENCODES a protein that exhibits calcium ion binding (ortholog); potassium channel regulator activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN positive regulation of action potential (ortholog); regulation of potassium ion transmembrane transport (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Idiopathic Generalized Epilepsy (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog); dendrite (ortholog) 9 6439637 6808026 - 22301074;30032202 116910441 MODEL JAAIVD010000002;XM_032914289;XM_032914290;XM_032914291;XM_032914292 XP_032770180;XP_032770181;XP_032770182;XP_032770183 Kv channel-interacting protein 1 protein-coding 626124688 LOC116895769 NEDD4-like E3 ubiquitin-protein ligase WWP1 3 47448543 47450506 - 116895769 MODEL JAAIVD010000012 pseudo 626124689 Bax BCL2 associated X, apoptosis regulator ENCODES a protein that exhibits BH domain binding (ortholog); BH3 domain binding (ortholog); channel activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN ceramide signaling pathway; intrinsic apoptotic pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome 1 (ortholog); acute kidney failure (ortholog); Acute Lung Injury (ortholog); FOUND IN BAK complex (ortholog); BAX complex (ortholog); Bcl-2 family protein complex (ortholog) 2 154044388 154049903 + 30032202 116892149 MODEL JAAIVD010000001;XM_032893643;XM_032893644 XP_032749534;XP_032749535 apoptosis regulator BAX protein-coding 626124705 Six5 SIX homeobox 5 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); Leydig cell proliferation (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH branchiootorenal syndrome (ortholog); branchiootorenal syndrome 2 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 2 171525999 171529692 - 22301074;30032202 116892550 MODEL JAAIVD010000001;XM_032894322 XP_032750213 homeobox protein SIX5 protein-coding 626124712 Tnks1bp1 tankyrase 1 binding protein 1 ENCODES a protein that exhibits ankyrin repeat binding (ortholog); enzyme binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN adherens junction (ortholog); CCR4-NOT complex (ortholog); cytoplasm (ortholog) 5 62418545 62443064 + 30032202 116901594 MODEL JAAIVD010000023;XM_032903618;XM_032903619 XP_032759509;XP_032759510 182 kDa tankyrase-1-binding protein protein-coding 626124731 LOC116897833 60S ribosomal protein L26-like 1 4 11371745 11372165 + 116897833 MODEL JAAIVD010000003 pseudo 626124732 LOC116899770 U6 spliceosomal RNA 4 87639083 87639189 - 116899770 MODEL JAAIVD010000003;XR_004387783 snrna 626124735 LOC116894949 small nucleolar RNA SNORD34 2 154417369 154417435 + 116894949 MODEL JAAIVD010000001;XR_004387145 snorna 626124738 LOC116887243 olfactory receptor 2G3-like 1 38282683 38286353 - 22301074 116887243 MODEL JAAIVD010000025;XM_032888812;XM_032888820 XP_032744703;XP_032744711 putative olfactory receptor 2B3 protein-coding 626124745 Colec11 collectin subfamily member 11 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent carbohydrate binding (ortholog); D-mannose binding (ortholog); INVOLVED IN antimicrobial humoral response (ortholog); complement activation (ortholog); complement activation, lectin pathway (ortholog); ASSOCIATED WITH 3MC syndrome (ortholog); 3MC syndrome 1 (ortholog); 3MC syndrome 2 (ortholog); FOUND IN extracellular space (ortholog) 7 42042488 42071981 - 30032202 116905653 MODEL JAAIVD010000026;XM_032908627 XP_032764518 collectin-11 protein-coding 626124756 LOC116895352 pancreatic alpha-amylase-like 3 46507436 46510091 - 22301074 116895352 MODEL JAAIVD010000012;XM_032896653 XP_032752544 protein-coding 626124762 LOC116913102 carbonyl reductase [NADPH] 1-like 12 31029291 31030170 + 116913102 MODEL JAAIVD010000007 pseudo 626124763 Slc27a5 solute carrier family 27 member 5 ENCODES a protein that exhibits cholate-CoA ligase activity (ortholog); fatty acid transmembrane transporter activity (ortholog); long-chain fatty acid transmembrane transporter activity (ortholog); INVOLVED IN bile acid biosynthetic process (ortholog); bile acid metabolic process (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN bile acid biosynthetic pathway; cerebrotendinous xanthomatosis pathway; congenital bile acid synthesis defect pathway; ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN basal plasma membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 174187193 174197238 + 30032202 116892619 MODEL JAAIVD010000001;XM_032894425 XP_032750316 bile acyl-CoA synthetase protein-coding 626124777 LOC116885900 uncharacterized LOC116885900 16 15199467 15217723 - 116885900 MODEL JAAIVD010000004;XR_004386046 ncrna 626124782 Rxrb retinoid X receptor beta ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); cellular response to retinoic acid (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 18 8288378 8294517 - 22301074;30032202 116887406 MODEL JAAIVD010000013;XM_032889001;XM_032889002;XM_032889003 XP_032744892;XP_032744893;XP_032744894 retinoic acid receptor RXR-beta protein-coding 626124803 LOC116890532 small nucleolar RNA SNORA17 1 78771120 78771248 - 116890532 MODEL JAAIVD010000025;XR_004386713 snorna 626124806 LOC116887813 stabilizer of axonemal microtubules 1-like X 30595178 30596468 - 116887813 MODEL JAAIVD010000014 pseudo 626124807 LOC116913992 uncharacterized LOC116913992 12 40070913 40081482 + 116913992 MODEL JAAIVD010000007;XR_004389649 ncrna 626124812 LOC116897483 small nucleolar RNA SNORA70 3 25356445 25356566 - 116897483 MODEL JAAIVD010000012 pseudo 626124813 Bcl9 BCL9 transcription coactivator ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); myoblast differentiation (ortholog); myotube differentiation involved in skeletal muscle regeneration (ortholog); ASSOCIATED WITH long QT syndrome (ortholog); Ovarian Neoplasms (ortholog); FOUND IN beta-catenin-TCF complex (ortholog); cis-Golgi network (ortholog); cytoplasm (ortholog) 3 60041267 60128396 + 30032202 116896489 MODEL JAAIVD010000012;XM_032897659;XM_032897661;XM_032897662;XM_032897663 XP_032753550;XP_032753552;XP_032753553;XP_032753554 B-cell CLL/lymphoma 9 protein protein-coding 626124837 Zpbp2 zona pellucida binding protein 2 INVOLVED IN acrosome assembly (ortholog); binding of sperm to zona pellucida (ortholog); circadian regulation of gene expression (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); zona pellucida receptor complex (ortholog) 9 55828726 55837386 - 30032202 116910106 MODEL JAAIVD010000002;XM_032913934 XP_032769825 zona pellucida-binding protein 2 protein-coding 626124849 LOC116890352 U6 spliceosomal RNA 1 89954317 89954420 + 116890352 MODEL JAAIVD010000025;XR_004386571 snrna 626124852 Gdnf glial cell derived neurotrophic factor ENCODES a protein that exhibits glial cell-derived neurotrophic factor receptor binding (ortholog); growth factor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cellular response to dexamethasone stimulus (ortholog); commissural neuron axon guidance (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); Golgi apparatus (ortholog) 3 172670582 172692700 - 22301074;30032202 116895624 MODEL JAAIVD010000012;XM_032896833;XM_032896834;XM_032896835 XP_032752724;XP_032752725;XP_032752726 glial cell line-derived neurotrophic factor protein-coding 626124863 Ndufa6 NADH:ubiquinone oxidoreductase subunit A6 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 252078404 252082367 - 30032202 116914286 MODEL JAAIVD010000025;XM_032918520 XP_032774411 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 protein-coding 626124870 Tmem201 transmembrane protein 201 ENCODES a protein that exhibits actin filament binding (ortholog); lamin binding (ortholog); INVOLVED IN angiogenesis (ortholog); centrosome localization (ortholog); fibroblast migration (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); nuclear envelope (ortholog); nuclear inner membrane (ortholog) 1 11028268 11050597 + 22301074;30032202 116892569 MODEL JAAIVD010000025;XM_032894350 XP_032750241 protein-coding 626124885 LOC116900415 olfactory receptor 4P4-like 5 70353285 70354214 - 22301074 116900415 MODEL JAAIVD010000023;XM_032902158 XP_032758049 protein-coding 626124888 Agmat agmatinase (putative) ENCODES a protein that exhibits arginase activity (ortholog); guanidinobutyrase activity (ortholog); guanidinopropionase activity (ortholog); FOUND IN mitochondrion (ortholog) 1 16389820 16404225 - 22301074;30032202 116893232 MODEL JAAIVD010000025;XM_032895108 XP_032750999 agmatinase;agmatinase, mitochondrial protein-coding 626124899 Atp2a1 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); calcium-dependent ATPase activity (ortholog); INVOLVED IN apoptotic mitochondrial changes (ortholog); calcium ion import (ortholog); calcium ion transmembrane transport (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Alcohol Myopathy (ortholog); Brody myopathy (ortholog); Cachexia (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); H zone (ortholog); I band (ortholog) 2 75462585 75480723 + 22301074;30032202 116891526 MODEL JAAIVD010000001;XM_032892673;XM_032892674 XP_032748564;XP_032748565 sarcoplasmic/endoplasmic reticulum calcium ATPase 1 protein-coding 626124930 Dnajc22 DnaJ heat shock protein family (Hsp40) member C22 1 271926653 271931371 + 30032202 116884969 MODEL JAAIVD010000025;XM_032886179;XM_032886190 XP_032742070;XP_032742081 dnaJ homolog subfamily C member 22 protein-coding 626124942 LOC116895213 mutS protein homolog 4-like 3 7544234 7595338 + 116895213 MODEL JAAIVD010000012 pseudo 626124943 Ncaph non-SMC condensin I complex subunit H ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN female meiosis chromosome separation (ortholog); female meiotic nuclear division (ortholog); meiotic chromosome condensation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN chromosome (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 5 105933507 105954297 - 22301074;30032202 116901927 MODEL JAAIVD010000023;XM_032904150 XP_032760041 condensin complex subunit 2 protein-coding 626124964 LOC116910730 small nucleolar RNA SNORD91 family 9 93641901 93641993 + 116910730 MODEL JAAIVD010000002;XR_004389248 snorna 626124967 Col4a1 collagen type IV alpha 1 chain ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); extracellular matrix structural constituent conferring tensile strength (ortholog); platelet-derived growth factor binding (ortholog); INVOLVED IN basement membrane organization (ortholog); blood vessel morphogenesis (ortholog); brain development (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); anterior segment dysgenesis (ortholog); Axenfeld-Rieger syndrome (ortholog); FOUND IN basement membrane (ortholog); collagen type IV trimer (ortholog) 13 72545321 72655537 + 22301074;30032202 116914227 MODEL JAAIVD010000008;XM_032918422 XP_032774313 collagen alpha-1(IV) chain protein-coding 626125023 Dusp6 dual specificity phosphatase 6 ENCODES a protein that exhibits MAP kinase tyrosine/serine/threonine phosphatase activity (ortholog); phosphoprotein phosphatase activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of MAPK cascade (ortholog); PARTICIPATES IN the extracellular signal-regulated Raf/Mek/Erk signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); brain ischemia (ortholog); breast cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 178394220 178398782 + 22301074;30032202 116908577 MODEL JAAIVD010000025;XM_032911794 XP_032767685 dual specificity protein phosphatase 6 protein-coding 626125030 Tax1bp3 Tax1 binding protein 3 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); negative regulation of protein localization to cell surface (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); fibrillar center (ortholog) 9 42330743 42335549 - 22301074;30032202 116908901 MODEL JAAIVD010000002;XM_032912356 XP_032768247 tax1-binding protein 3 protein-coding 626125038 Prkca protein kinase C alpha ENCODES a protein that exhibits calcium,diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent serine/threonine kinase activity (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to carbohydrate stimulus (ortholog); central nervous system neuron axonogenesis (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN eicosanoid signaling pathway; endothelin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH brain ischemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN alphav-beta3 integrin-PKCalpha complex (ortholog); apical part of cell (ortholog); axon (ortholog) 9 70795995 71195969 + 22301074;3387228;8798342 116910423 MODEL JAAIVD010000002;X07286;XM_032914268 CAA30266;XP_032770159 protein kinase C alpha type protein-coding 626125059 LOC116889431 U6 spliceosomal RNA X 22604471 22604571 - 116889431 MODEL JAAIVD010000014 pseudo 626125060 LOC116913901 60S ribosomal protein L10a-like 12 23996073 24001316 + 116913901 MODEL JAAIVD010000007 pseudo 626125061 LOC116895435 60S ribosomal protein L7a-like 3 67675971 67676767 + 116895435 MODEL JAAIVD010000012 pseudo 626125062 Dcbld1 discoidin, CUB and LCCL domain containing 1 ASSOCIATED WITH intellectual disability (ortholog); melanoma (ortholog) 8 20085767 20155961 + 116907127 MODEL JAAIVD010000027;XM_032910102 XP_032765993 discoidin, CUB and LCCL domain-containing protein 1 protein-coding 626125077 LOC116884967 uncharacterized LOC116884967 15 7694205 7702743 + 116884967 MODEL JAAIVD010000010;XM_032886175 XP_032742066 uncharacterized protein LOC116884967 protein-coding 626125092 Mras muscle RAS oncogene homolog ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); GTPase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); Ras protein signal transduction (ortholog); ASSOCIATED WITH carotid artery disease (ortholog); coronary artery disease (ortholog); Coronary Disease (ortholog); FOUND IN protein phosphatase type 1 complex (ortholog) 8 90726227 90778971 - 22301074;30032202 116907179 MODEL JAAIVD010000027;XM_032910138;XM_032910139 XP_032766029;XP_032766030 ras-related protein M-Ras protein-coding 626125105 Klhl26 kelch like family member 26 13 12707631 12731338 - 22301074 116914628 MODEL JAAIVD010000008;XM_032919015 XP_032774906 kelch-like protein 26 protein-coding 626125113 Eif3h eukaryotic translation initiation factor 3 subunit H ENCODES a protein that exhibits metal-dependent deubiquitinase activity (ortholog); translation initiation factor activity (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); translational initiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); breast cancer (ortholog); Colorectal Neoplasms (ortholog); FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) 1 226436509 226519401 + 22301074;30032202 116911376 MODEL JAAIVD010000025;XM_032915320 XP_032771211 protein-coding 626125125 LOC116899414 mitochondrial intermembrane space import and assembly protein 40-like 4 133367622 133368100 - 30032202 116899414 MODEL JAAIVD010000003;XM_032901152 XP_032757043 protein-coding 626125129 Rspo1 R-spondin 1 ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); heparin binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN male meiotic nuclear division (ortholog); negative regulation of eating behavior (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH genetic disease (ortholog); obesity (ortholog); ovarian carcinoma (ortholog); FOUND IN extracellular space (ortholog); nucleus (ortholog) 1 33291022 33313663 - 116887035 MODEL JAAIVD010000025;XM_032888531 XP_032744422 R-spondin-1 protein-coding 626125139 LOC116915128 small nucleolar RNA SNORA17 13 32476097 32476227 - 116915128 MODEL JAAIVD010000008;XR_004389808 snorna 626125142 Strc stereocilin INVOLVED IN auditory receptor cell stereocilium organization (ortholog); detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear receptor cell stereocilium organization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 16 (ortholog); autosomal recessive nonsyndromic deafness 16 (ortholog); Deafness-Infertility Syndrome (ortholog); FOUND IN kinocilium (ortholog); stereocilium tip (ortholog) 5 99515352 99532934 - 30032202 116901859 MODEL JAAIVD010000023;XM_032904056 XP_032759947 protein-coding 626125173 Rnf166 ring finger protein 166 17 42106421 42115845 - 30032202 116886423 MODEL JAAIVD010000011;XM_032887908 XP_032743799 E3 ubiquitin-protein ligase RNF166 protein-coding 626125183 S100a16 S100 calcium binding protein A16 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN response to calcium ion (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular space (ortholog) 3 63080044 63081211 - 22301074;30032202 116896597 MODEL JAAIVD010000012;XM_032897844 XP_032753735 protein S100-A16 protein-coding 626125189 Rcc2 regulator of chromosome condensation 2 ENCODES a protein that exhibits microtubule binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); chromosome passenger complex localization to kinetochore (ortholog); establishment of protein localization (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN chromosome, centromeric core domain (ortholog); early endosome membrane (ortholog); membrane (ortholog) 1 17425442 17446918 - 116893565 MODEL JAAIVD010000025;XM_032895275 XP_032751166 protein RCC2 protein-coding 626125206 LOC116907425 olfactory receptor 150-like 8 82324867 82325811 + 22301074;30032202 116907425 MODEL JAAIVD010000027;XM_032910392 XP_032766283 protein-coding 626125209 Bsx brain specific homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN eating behavior (ortholog); locomotory behavior (ortholog); mammary gland involution (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 8 35473028 35476852 + 22301074 116908098 MODEL JAAIVD010000027;XM_032911377 XP_032767268 brain-specific homeobox protein homolog protein-coding 626125216 Maml3 mastermind like transcriptional coactivator 3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN Notch signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); congenital heart disease (ortholog); sarcoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 3 102345104 102772838 + 22301074;30032202 116896885 MODEL JAAIVD010000012;XM_032898431 XP_032754322 mastermind-like protein 3 protein-coding 626125225 LOC116903210 uncharacterized LOC116903210 6 19212674 19264854 - 116903210 MODEL JAAIVD010000024;XR_004388261 ncrna 626125230 LOC116889158 caspase-3-like 1 122060455 122061282 - 116889158 MODEL JAAIVD010000025 pseudo 626125231 Slc11a1 solute carrier family 11 member 1 ENCODES a protein that exhibits iron ion transmembrane transporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); metal cation:proton antiporter activity (ortholog); INVOLVED IN antigen processing and presentation of peptide antigen (ortholog); cadmium ion transmembrane transport (ortholog); cellular detoxification of cadmium ion (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN endosome membrane (ortholog); late endosome (ortholog); late endosome membrane (ortholog) 4 147824608 147833328 + 22301074;30032202 116898225 MODEL JAAIVD010000003;XM_032899581 XP_032755472 natural resistance-associated macrophage protein 1 protein-coding 626125249 Dhx9 DExH-box helicase 9 ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' DNA/RNA helicase activity (ortholog); 3'-5' RNA helicase activity (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); cellular response to heat (ortholog); PARTICIPATES IN aldosterone signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 75 (ortholog); Charcot-Marie-Tooth disease (ortholog); genetic disease (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); CRD-mediated mRNA stability complex (ortholog) 10 32909365 32944570 - 22301074;30032202 116911074 MODEL JAAIVD010000005;XM_032914854 XP_032770745 ATP-dependent RNA helicase A protein-coding 626125281 Cxcr4 C-X-C motif chemokine receptor 4 ENCODES a protein that exhibits actin binding (ortholog); C-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); ameboidal-type cell migration (ortholog); aorta development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; hypoxia inducible factor pathway; sphingosine 1-phosphate signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Bone Metastasis (ortholog); Breast Neoplasms (ortholog); FOUND IN cell leading edge (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 10 7144801 7148721 + 22301074;30032202 116911544 MODEL JAAIVD010000005;XM_032915533;XM_032915534 XP_032771424;XP_032771425 C-X-C chemokine receptor type 4 protein-coding 626125290 Mrpl44 mitochondrial ribosomal protein L44 INVOLVED IN mitochondrial translational elongation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 1 (ortholog); combined oxidative phosphorylation deficiency 16 (ortholog); genetic disease (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 152835981 152842210 + 22301074;30032202 116899552 MODEL JAAIVD010000003;XM_032901446 XP_032757337 39S ribosomal protein L44, mitochondrial protein-coding 626125298 Entpd5 ectonucleoside triphosphate diphosphohydrolase 5 (inactive) ENCODES a protein that exhibits ADP phosphatase activity (ortholog); CDP phosphatase activity (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN 'de novo' post-translational protein folding (ortholog); protein N-linked glycosylation (ortholog); UDP catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular region (ortholog) 7 98476199 98508474 - 30032202 116905269 MODEL JAAIVD010000026;XM_032908121 XP_032764012 ectonucleoside triphosphate diphosphohydrolase 5 protein-coding 626125317 LOC116903969 solute carrier family 23 member 1-like 6 104665780 104705635 + 22301074 116903969 MODEL JAAIVD010000024;XM_032906769 XP_032762660 protein-coding 626125332 LOC116887412 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8628792 8631988 - 116887412 MODEL JAAIVD010000013 pseudo 626125333 LOC116893662 60S ribosomal protein L35a-like 2 11736089 11736422 - 116893662 MODEL JAAIVD010000001 pseudo 626125334 LOC116898572 UDP-glucuronosyltransferase 1-3-like 4 160223908 160233184 + 22301074 116898572 MODEL JAAIVD010000003;XM_032899778 XP_032755669 protein-coding 626125339 LOC116889422 U6 spliceosomal RNA X 96004588 96004691 - 116889422 MODEL JAAIVD010000014;XR_004386387 snrna 626125342 LOC116913957 ribosome biogenesis protein WDR12-like 12 14424493 14426198 + 116913957 MODEL JAAIVD010000007 pseudo 626125343 LOC116903795 uncharacterized LOC116903795 6 17940162 17964991 + 30032202 116903795 MODEL JAAIVD010000024;XM_032906488 XP_032762379 uncharacterized protein LOC116903795 protein-coding 626125359 Ppp2r1b protein phosphatase 2 scaffold subunit Abeta INVOLVED IN apoptotic process involved in morphogenesis (ortholog); positive regulation of extrinsic apoptotic signaling pathway in absence of ligand (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH lung cancer (ortholog); lung carcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane raft (ortholog); synapse (ortholog) 8 45315311 45348085 + 22301074;30032202 116906792 MODEL JAAIVD010000027;XM_032909657;XM_032909658 XP_032765548;XP_032765549 serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform protein-coding 626125384 LOC116884280 protocadherin beta-6-like 15 961645 965167 + 22301074 116884280 MODEL JAAIVD010000010;XM_032885363 XP_032741254 protein-coding 626125389 LOC116891742 cytochrome c oxidase assembly factor 4 homolog, mitochondrial FOUND IN mitochondrion (ortholog) 2 98835984 98839229 + 30032202 116891742 MODEL JAAIVD010000001;XM_032893049;XM_032893050 XP_032748940;XP_032748941 protein-coding 626125400 Chrna6 cholinergic receptor nicotinic alpha 6 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); heterocyclic compound binding (ortholog); INVOLVED IN behavioral response to nicotine (ortholog); establishment of localization in cell (ortholog); membrane depolarization (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol use disorder (ortholog); cocaine abuse (ortholog); nicotine dependence (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); dopaminergic synapse (ortholog) 13 59172405 59179835 + 22301074;30032202 116914560 MODEL JAAIVD010000008;XM_032918913 XP_032774804 neuronal acetylcholine receptor subunit alpha-6 protein-coding 626125410 Kcnu1 potassium calcium-activated channel subfamily U member 1 ENCODES a protein that exhibits potassium channel activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); fertilization (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH spermatogenic failure 79 (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN plasma membrane (ortholog); sperm flagellum (ortholog) 13 60568651 60648877 - 22301074;30032202 116914901 MODEL JAAIVD010000008;XM_032919343 XP_032775234 potassium channel subfamily U member 1 protein-coding 626125440 Slc4a7 solute carrier family 4 member 7 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN auditory receptor cell development (ortholog); camera-type eye photoreceptor cell differentiation (ortholog); cellular response to growth factor stimulus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); fundus dystrophy (ortholog); lung adenocarcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 12 84672405 84751781 + 22301074;30032202 116913870 MODEL JAAIVD010000007;XM_032918164 XP_032774055 sodium bicarbonate cotransporter 3 protein-coding 626125470 LOC116887253 60S ribosomal protein L27-like 18 27356995 27357438 - 116887253 MODEL JAAIVD010000013 pseudo 626125471 LOC116902500 U6 spliceosomal RNA 5 70382121 70382225 - 116902500 MODEL JAAIVD010000023;XR_004388113 snrna 626125474 LOC116890476 small nucleolar RNA SNORA21 1 12151108 12151239 + 116890476 MODEL JAAIVD010000025;XR_004386665 snorna 626125477 Eif2s2 eukaryotic translation initiation factor 2 subunit beta ENCODES a protein that exhibits translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); in utero embryonic development (ortholog); male germ cell proliferation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Testicular Germ Cell Tumor (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2 complex (ortholog); nucleus (ortholog) 5 134242129 134263622 - 22301074;30032202 116902168 MODEL JAAIVD010000023;XM_032904511 XP_032760402 eukaryotic translation initiation factor 2 subunit 2 protein-coding 626125490 Slc25a12 solute carrier family 25 member 12 ENCODES a protein that exhibits 3-sulfino-L-alanine: proton, glutamate antiporter activity (ortholog); acidic amino acid transmembrane transporter activity (ortholog); aspartate:glutamate, proton antiporter activity (ortholog); INVOLVED IN aspartate transmembrane transport (ortholog); glutamate biosynthetic process (ortholog); L-glutamate transmembrane transport (ortholog); PARTICIPATES IN argininosuccinic aciduria pathway; carbamoyl phosphate synthetase I deficiency pathway; citrullinemia pathway; ASSOCIATED WITH Asperger syndrome (ortholog); autistic disorder (ortholog); developmental and epileptic encephalopathy 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 48568713 48660029 - 22301074;30032202 116901504 MODEL JAAIVD010000023;XM_032903473 XP_032759364 calcium-binding mitochondrial carrier protein Aralar1 protein-coding 626125512 LOC116913764 histone H3.3A-like 12 77114572 77114980 + 116913764 MODEL JAAIVD010000007 pseudo 626125513 Adgre5 adhesion G protein-coupled receptor E5 INVOLVED IN positive regulation of synapse assembly (ortholog); ASSOCIATED WITH lung disease (ortholog); pancreatic cancer (ortholog); FOUND IN external side of plasma membrane (ortholog) 17 16533458 16552722 + 22301074;30032202 116886187 MODEL JAAIVD010000011;XM_032887560 XP_032743451 CD97 antigen protein-coding 626125537 Sertad4 SERTA domain containing 4 10 70829522 70840445 - 30032202 116911395 MODEL JAAIVD010000005;XM_032915356 XP_032771247 SERTA domain-containing protein 4 protein-coding 626125545 LOC116911982 40S ribosomal protein S4, X isoform-like 11 43481871 43483613 - 116911982 MODEL JAAIVD010000006 pseudo 626125546 LOC116897815 T-kininogen 2 4 7830767 7855309 + 22301074;30032202 116897815 MODEL JAAIVD010000003;XM_032899230;XM_032899231;XM_032899232;XM_032899233 XP_032755121;XP_032755122;XP_032755123;XP_032755124 protein-coding 626125570 Trmt10b tRNA methyltransferase 10B ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); TIM22 mitochondrial import inner membrane insertion complex (ortholog) 1 1200768 1221336 - 30032202 116890792 MODEL JAAIVD010000025;XM_032891271;XM_032891279 XP_032747162;XP_032747170 tRNA methyltransferase 10 homolog B protein-coding 626125586 LOC116888358 testis-expressed protein 13C-1-like X 105281640 105283482 - 116888358 MODEL JAAIVD010000014;XM_032889627 XP_032745518 protein-coding 626125589 LOC116910164 60S ribosomal protein L23a-like 9 62219948 62220468 - 116910164 MODEL JAAIVD010000002 pseudo 626125590 LOC116913981 activated RNA polymerase II transcriptional coactivator p15-like 12 82337265 82337683 + 116913981 MODEL JAAIVD010000007 pseudo 626125591 LOC116894124 olfactory receptor 52N2-like 2 103840800 103841756 - 22301074 116894124 MODEL JAAIVD010000001;XM_032895841 XP_032751732 protein-coding 626125594 Nos2 nitric oxide synthase 2 ENCODES a protein that exhibits actin binding (ortholog); arginine binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN blood vessel remodeling (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to interleukin-1 (ortholog); PARTICIPATES IN endothelin signaling pathway; hypoxia inducible factor pathway; interleukin-12 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Hepatitis (ortholog); acute kidney failure (ortholog); FOUND IN cortical cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 91490611 91526596 - 22301074;30032202;7519448 116908775 MODEL JAAIVD010000002;X76881;XM_032912147 CAA54208;XP_032768038 nitric oxide synthase, inducible;nitric-oxide synthase protein-coding 626125625 LOC116907573 small nuclear ribonucleoprotein Sm D2-like 8 99567450 99567789 + 116907573 MODEL JAAIVD010000027 pseudo 626125626 Fastkd1 FAST kinase domains 1 INVOLVED IN mitochondrial RNA metabolic process (ortholog); regulation of mitochondrial mRNA stability (ortholog); ASSOCIATED WITH Glaucoma 1, Open Angle, B (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 5 46988285 47015125 - 22301074;30032202 116900832 MODEL JAAIVD010000023;XM_032902534 XP_032758425 FAST kinase domain-containing protein 1, mitochondrial protein-coding 626125643 Thap2 THAP domain containing 2 FOUND IN nucleolus (ortholog) 1 193537660 193548931 - 30032202 116909062 MODEL JAAIVD010000025;XM_032912544 XP_032768435 THAP domain-containing protein 2 protein-coding 626125650 LOC116894674 trace amine-associated receptor 7g 2 210095945 210097021 + 22301074;30032202 116894674 MODEL JAAIVD010000001;XM_032896376 XP_032752267 protein-coding 626125653 Prpf38b pre-mRNA processing factor 38B ASSOCIATED WITH High Myopia (ortholog) 3 49359509 49368554 + 30032202 116896353 MODEL JAAIVD010000012;XM_032897455;XM_032897456 XP_032753346;XP_032753347 pre-mRNA-splicing factor 38B protein-coding 626125667 LOC116905712 serine/Arginine-related protein 53 7 69510245 69511583 - 30032202 116905712 MODEL JAAIVD010000026;XM_032908684 XP_032764575 protein-coding 626125672 Tmem45b transmembrane protein 45B INVOLVED IN response to pain (ortholog); FOUND IN trans-Golgi network (ortholog) 8 27144866 27185860 - 116906685 MODEL JAAIVD010000027;XM_032909476 XP_032765367 protein-coding 626125682 Mal mal, T cell differentiation protein ENCODES a protein that exhibits structural constituent of myelin sheath (ortholog); INVOLVED IN central nervous system myelination (ortholog); myelination (ortholog); positive regulation of extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Head and Neck Neoplasms (ortholog); Hypomyelinating Leukodystrophy 28 (ortholog); FOUND IN apical plasma membrane (ortholog); endoplasmic reticulum (ortholog); hinge region between urothelial plaques of apical plasma membrane (ortholog) 5 106422571 106446282 - 22301074;30032202 116901939 MODEL JAAIVD010000023;XM_032904169 XP_032760060 myelin and lymphocyte protein protein-coding 626125690 Rimbp2 RIMS binding protein 2 ENCODES a protein that exhibits structural constituent of presynaptic active zone (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN regulation of calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of presynaptic membrane potential (ortholog); FOUND IN calyx of Held (ortholog); glutamatergic synapse (ortholog); presynaptic active zone cytoplasmic component (ortholog) 16 25106394 25212223 + 22301074;30032202 116885853 MODEL JAAIVD010000004;XM_032887187 XP_032743078 RIMS-binding protein 2 protein-coding 626125715 LOC116893871 X-linked lymphocyte-regulated protein 5C-like 2 63125322 63132395 - 30032202 116893871 MODEL JAAIVD010000001;XM_032895595 XP_032751486 protein-coding 626125726 Htra3 HtrA serine peptidase 3 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); serine-type peptidase activity (ortholog); INVOLVED IN negative regulation of BMP signaling pathway (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); proteolysis (ortholog); ASSOCIATED WITH Mycoplasma pneumoniae pneumonia (ortholog) 11 69399183 69417781 + 22301074 116912534 MODEL JAAIVD010000006;XM_032916638 XP_032772529 serine protease HTRA3 protein-coding 626125737 Galnt5 polypeptide N-acetylgalactosaminyltransferase 5 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog) 5 35828499 35869244 + 30032202 116901424 MODEL JAAIVD010000023;XM_032903316 XP_032759207 protein-coding 626125751 LOC116894607 vomeronasal type-2 receptor 116-like 2 182908695 182923085 + 22301074;30032202 116894607 MODEL JAAIVD010000001;XM_032896324 XP_032752215 protein-coding 626125759 Foxp4 forkhead box P4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN embryonic foregut morphogenesis (ortholog); heart development (ortholog); lung secretory cell differentiation (ortholog); ASSOCIATED WITH congestive heart failure (ortholog); Developmental Disabilities (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 4 81963197 81998578 + 30032202 116899071 MODEL JAAIVD010000003;XM_032900557;XM_032900558;XM_032900559;XM_032900560 XP_032756448;XP_032756449;XP_032756450;XP_032756451 forkhead box protein P4 protein-coding 626125784 LOC116914498 transcription factor SOX-1-like 13 71487214 71488958 - 116914498 MODEL JAAIVD010000008;XR_004389753 pseudo 626125787 Znf263 zinc finger protein 263 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 9 38507703 38514856 - 30032202 116909469 MODEL JAAIVD010000002;XM_032913057;XM_032913058 XP_032768948;XP_032768949 protein-coding 626125800 LOC116905229 cytochrome c oxidase subunit 7C, mitochondrial-like 7 95120146 95120562 + 22301074;30032202 116905229 MODEL JAAIVD010000026;XM_032908044 XP_032763935 protein-coding 626125805 Gad2 glutamate decarboxylase 2 ENCODES a protein that exhibits glutamate binding (ortholog); glutamate decarboxylase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to hypoxia (ortholog); gamma-aminobutyrate shunt (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); amphetamine abuse (ortholog); autism spectrum disorder (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); GABA-ergic synapse (ortholog) 14 1868256 1935576 - 22301074;30032202 116884057 MODEL JAAIVD010000009;XM_032885304 XP_032741195 protein-coding 626125825 Prkci protein kinase C iota ENCODES a protein that exhibits diacylglycerol-dependent serine/threonine kinase activity (ortholog); diacylglycerol-dependent, calcium-independent serine/threonine kinase activity (ortholog); phospholipid binding (ortholog); INVOLVED IN actin filament organization (ortholog); cell migration (ortholog); cell-cell junction organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; interleukin-1 signaling pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); autistic disorder (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); bicellular tight junction (ortholog) 3 125230654 125288515 + 22301074 116896980 MODEL JAAIVD010000012;XM_032898566 XP_032754457 protein kinase C iota type protein-coding 626125847 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 56615421 56615492 + 116910810 MODEL JAAIVD010000002 trna 626125848 Mbd3l1 methyl-CpG binding domain protein 3 like 1 8 14568624 14569329 + 116906577 MODEL JAAIVD010000027;XM_032909311 XP_032765202 methyl-CpG-binding domain protein 3-like 1 protein-coding 626125852 Mier3 MIER family member 3 ENCODES a protein that exhibits histone deacetylase activity (ortholog); ASSOCIATED WITH breast cancer (ortholog); invasive ductal carcinoma (ortholog); lung adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 3 185331608 185358278 - 30032202 116897196 MODEL JAAIVD010000012;XM_032898898;XM_032898899 XP_032754789;XP_032754790 mesoderm induction early response protein 3 protein-coding 626125870 Plac9 placenta associated 9 13 2002114 2016204 - 116914648 MODEL JAAIVD010000008;XM_032919045 XP_032774936 placenta-specific protein 9 protein-coding 626125878 Ykt6 YKT6 vesicular SNARE protein ENCODES a protein that exhibits protein-cysteine S-palmitoyltransferase activity (ortholog); SNAP receptor activity (ortholog); INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); retrograde transport, endosome to Golgi (ortholog); vesicle docking involved in exocytosis (ortholog); FOUND IN apical dendrite (ortholog); basal dendrite (ortholog); cytoplasm (ortholog) 11 74904550 74915938 + 30032202 116912265 MODEL JAAIVD010000006;XM_032916253 XP_032772144 YKT6 v-SNARE homolog;synaptobrevin homolog YKT6 protein-coding 626125889 Fam117b family with sequence similarity 117 member B 5 6372980 6439718 - 116901199 MODEL JAAIVD010000023;XM_032902904 XP_032758795 protein FAM117B protein-coding 626125901 Myorg myogenesis regulating glycosidase (putative) INVOLVED IN positive regulation of insulin-like growth factor receptor signaling pathway (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); skeletal muscle fiber development (ortholog); ASSOCIATED WITH basal ganglia calcification (ortholog); Dysarthria (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); nuclear membrane (ortholog) 1 4046590 4054014 + 22301074;30032202 116891368 MODEL JAAIVD010000025;XM_032892370;XM_032892378;XM_032892389 XP_032748261;XP_032748269;XP_032748280 myogenesis-regulating glycosidase protein-coding 626125911 LOC116913775 olfactory receptor 10G3 12 71517869 71518810 + 22301074 116913775 MODEL JAAIVD010000007;XM_032918080 XP_032773971 protein-coding 626125914 Rsrp1 arginine and serine rich protein 1 INVOLVED IN spliceosomal complex assembly (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 14 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN nucleus (ortholog) 1 23318001 23321762 - 116894594 MODEL JAAIVD010000025;XM_032896315;XM_032896321;XR_004387028;XR_004387029;XR_004387030;XR_004387031 XP_032752206;XP_032752212 arginine/serine-rich protein 1 protein-coding 626125936 Ccl19 C-C motif chemokine ligand 19 ENCODES a protein that exhibits CCR chemokine receptor binding (ortholog); CCR10 chemokine receptor binding (ortholog); CCR7 chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL19-activated CCR7 signaling pathway (ortholog); cell maturation (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); allergic disease (ortholog); aspergillosis (ortholog); FOUND IN external side of plasma membrane (ortholog) 1 3760442 3762403 + 22301074;30032202 116885961 MODEL JAAIVD010000025;XM_032887291 XP_032743182 C-C motif chemokine 19 protein-coding 626125944 LOC116887324 histone H3.3A-like 1 39305852 39306265 + 116887324 MODEL JAAIVD010000025 pseudo 626125945 Rps13 ribosomal protein S13 ENCODES a protein that exhibits 5.8S rRNA binding (ortholog); mRNA 5'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN negative regulation of RNA splicing (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog) 2 85247621 85250123 + 22301074;2403345;30032202 116891624 MODEL JAAIVD010000001;X53378;XM_032892831 CAA37458;XP_032748722 40S ribosomal protein S13 protein-coding 626125955 Napsa napsin A aspartic peptidase ENCODES a protein that exhibits endopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); surfactant homeostasis (ortholog); ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN alveolar lamellar body (ortholog); extracellular space (ortholog); lysosome (ortholog) 2 154948365 154960882 - 22301074;30032202 116892200 MODEL JAAIVD010000001;XM_032893738 XP_032749629 napsin-A protein-coding 626125968 LOC116910643 U6 spliceosomal RNA 9 34554313 34554419 + 116910643 MODEL JAAIVD010000002;XR_004389180 snrna 626125971 Clk4 CDC like kinase 4 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN regulation of RNA splicing (ortholog); FOUND IN nucleus (ortholog) 9 33855428 33872162 + 22301074;30032202 116908610 MODEL JAAIVD010000002;XM_032911835;XM_032911836;XM_032911837;XM_032911838;XM_032911839;XM_032911840;XM_032911841;XM_032911842 XP_032767726;XP_032767727;XP_032767728;XP_032767729;XP_032767730;XP_032767731;XP_032767732;XP_032767733 dual specificity protein kinase CLK4 protein-coding 626126010 LOC116887426 coiled-coil domain-containing protein 85C-like 1 42304977 42306397 + 116887426 MODEL JAAIVD010000025 pseudo 626126011 C1H8orf33 chromosome 1 C8orf33 homolog 1 249288558 249290616 + 116913528 MODEL JAAIVD010000025;XM_032917729 XP_032773620 UPF0488 protein C8orf33 homolog protein-coding 626126020 LOC116904735 small nucleolar RNA SNORA17 6 84519357 84519482 + 116904735 MODEL JAAIVD010000024;XR_004388424 snorna 626126023 LOC116889720 transmembrane protein 225 1 147051494 147054084 - 30032202 116889720 MODEL JAAIVD010000025;XM_032890601;XM_032890606 XP_032746492;XP_032746497 protein-coding 626126033 LOC116907278 putative gustatory receptor clone PTE01 8 16486210 16499020 - 116907278 MODEL JAAIVD010000027 pseudo 626126034 Espnl espin like ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN sensory perception of sound (ortholog); FOUND IN stereocilium tip (ortholog) 4 163317982 163340300 + 30032202 116898576 MODEL JAAIVD010000003;XM_032899779 XP_032755670 espin-like protein protein-coding 626126045 Mocs2 molybdenum cofactor synthesis 2 ENCODES a protein that exhibits identical protein binding (ortholog); molybdopterin synthase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (ortholog); molybdopterin cofactor biosynthetic process (ortholog); PARTICIPATES IN molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH genetic disease (ortholog); molybdenum cofactor deficiency (ortholog); molybdenum cofactor deficiency type A (ortholog); FOUND IN cytosol (ortholog); molybdopterin synthase complex (ortholog); nuclear speck (ortholog) 3 181888287 181900225 - 22301074;30032202 116897180 MODEL JAAIVD010000012;XM_032898866 XP_032754757 molybdopterin synthase catalytic subunit protein-coding 626126055 LOC116884015 N-terminal Xaa-Pro-Lys N-methyltransferase 1-like 14 58717489 58718141 + 116884015 MODEL JAAIVD010000009 pseudo 626126056 LOC116908450 U4 spliceosomal RNA 8 105423765 105423889 + 116908450 MODEL JAAIVD010000027 pseudo 626126057 LOC116897500 small nucleolar RNA SNORA24 3 36293659 36293788 + 116897500 MODEL JAAIVD010000012;XR_004387521 snorna 626126060 Slc34a3 solute carrier family 34 member 3 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); INVOLVED IN intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); response to magnesium ion (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH familial hypocalciuric hypercalcemia (ortholog); genetic disease (ortholog); hereditary hypophosphatemic rickets with hypercalciuria (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 5 11947934 11953227 + 22301074;30032202 116900101 MODEL JAAIVD010000023;XM_032901880 XP_032757771 sodium-dependent phosphate transport protein 2C protein-coding 626126077 Ddx54 DEAD-box helicase 54 ENCODES a protein that exhibits nuclear estrogen receptor binding (ortholog); RNA helicase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN RNA metabolic process (ortholog); RNA processing (ortholog); ASSOCIATED WITH epilepsy (ortholog); intellectual disability (ortholog); Liver Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 16 33199201 33214504 - 22301074 116885299 MODEL JAAIVD010000004;XM_032886548 XP_032742439 ATP-dependent RNA helicase DDX54 protein-coding 626126101 Katnb1 katanin regulatory subunit B1 ENCODES a protein that exhibits ATPase regulator activity (ortholog); dynein complex binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN microtubule severing (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); lissencephaly 6 (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 17 1954875 1973643 + 22301074;30032202 116886356 MODEL JAAIVD010000011;XM_032887809;XM_032887810;XM_032887811;XM_032887812;XM_032887813;XM_032887814 XP_032743700;XP_032743701;XP_032743702;XP_032743703;XP_032743704;XP_032743705 katanin p80 WD40 repeat-containing subunit B1 protein-coding 626126137 LOC116904138 protein argonaute-2-like 1 143167682 143170528 + 116904138 MODEL JAAIVD010000025 pseudo 626126138 LOC116890432 U7 small nuclear RNA 1 57568910 57568971 - 116890432 MODEL JAAIVD010000025;XR_004386630 snrna 626126141 Ip6k2 inositol hexakisphosphate kinase 2 ENCODES a protein that exhibits flavonoid binding (ortholog); inositol hexakisphosphate 5-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN cellular response to flavonoid (ortholog); inositol phosphate biosynthetic process (ortholog); inositol phosphate metabolic process (ortholog); ASSOCIATED WITH Huntington's disease (ortholog); FOUND IN cell junction (ortholog); fibrillar center (ortholog); nucleoplasm (ortholog) 8 100112897 100137899 + 22301074;30032202 116907619 MODEL JAAIVD010000027;XM_032910674 XP_032766565 protein-coding 626126151 LOC116902800 taste receptor type 2 member 102-like 6 16521891 16522919 + 22301074;30032202 116902800 MODEL JAAIVD010000024;XM_032905136 XP_032761027 protein-coding 626126154 Hmces 5-hydroxymethylcytosine binding, ES cell specific ENCODES a protein that exhibits DNA-(abasic site) binding (ortholog); DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); protein-DNA covalent cross-linking activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via alternative nonhomologous end joining (ortholog); interstrand cross-link repair (ortholog); FOUND IN replication fork (ortholog) 6 58367167 58390355 - 22301074;30032202 116903531 MODEL JAAIVD010000024;XM_032906141 XP_032762032 abasic site processing protein HMCES protein-coding 626126165 Ip6k3 inositol hexakisphosphate kinase 3 ENCODES a protein that exhibits inositol hexakisphosphate 6-kinase activity (ortholog); inositol hexakisphosphate kinase activity (ortholog); INVOLVED IN inositol phosphate biosynthetic process (ortholog); locomotion (ortholog); phosphatidylinositol metabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 18 6653170 6665233 + 22301074;30032202 116887213 MODEL JAAIVD010000013;XM_032888775 XP_032744666 protein-coding 626126173 LOC116884304 protocadherin alpha-1-like 15 7437395 7440026 - 22301074 116884304 MODEL JAAIVD010000010;XM_032885414 XP_032741305 protein-coding 626126178 Twf2 twinfilin actin binding protein 2 ENCODES a protein that exhibits actin monomer binding (ortholog); ATP binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN barbed-end actin filament capping (ortholog); cellular response to growth factor stimulus (ortholog); cellular response to retinoic acid (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); filopodium (ortholog); growth cone (ortholog) 8 97510476 97523082 + 30032202 116907462 MODEL JAAIVD010000027;XM_032910448 XP_032766339 twinfilin-2 protein-coding 626126191 LOC116897535 small nucleolar RNA SNORA48 3 61375656 61375798 - 116897535 MODEL JAAIVD010000012;XR_004387550 snorna 626126194 LOC116899801 U7 small nuclear RNA 4 78458925 78458986 + 116899801 MODEL JAAIVD010000003;XR_004387803 snrna 626126197 LOC116904449 pyruvate kinase PKM-like 6 125851698 125859285 + 116904449 MODEL JAAIVD010000024 pseudo 626126198 LOC116909099 T-cell immunoglobulin and mucin domain-containing protein 2 9 29327078 29356333 - 30032202 116909099 MODEL JAAIVD010000002;XM_032912571 XP_032768462 protein-coding 626126211 Ampd3 adenosine monophosphate deaminase 3 ENCODES a protein that exhibits AMP deaminase activity (ortholog); INVOLVED IN ADP catabolic process (ortholog); ADP metabolic process (ortholog); AMP catabolic process (ortholog); ASSOCIATED WITH Adenosine Monophosphate Deaminase Deficiency (ortholog); Erythrocyte Amp Deaminase Deficiency (ortholog); myoepithelioma (ortholog) 2 90635723 90680923 - 22301074;30032202 116891659 MODEL JAAIVD010000001;XM_032892907;XM_032892908;XM_032892909;XM_032892910;XR_004386856 XP_032748798;XP_032748799;XP_032748800;XP_032748801 AMP deaminase 3 protein-coding 626126242 LOC116889468 small nucleolar RNA SNORA57 X 87552732 87552871 - 116889468 MODEL JAAIVD010000014;XR_004386420 snorna 626126245 Znf579 zinc finger protein 579 ENCODES a protein that exhibits DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog) 2 177568891 177572084 - 116892679 MODEL JAAIVD010000001;XM_032894519 XP_032750410 protein-coding 626126251 Lysmd4 LysM domain containing 4 2 133107519 133112248 - 116891985 MODEL JAAIVD010000001;XM_032893435;XM_032893436;XM_032893437 XP_032749326;XP_032749327;XP_032749328 lysM and putative peptidoglycan-binding domain-containing protein 4 protein-coding 626126269 Ccdc39 coiled-coil domain 39 molecular ruler complex subunit INVOLVED IN axonemal dynein complex assembly (ortholog); brain development (ortholog); central nervous system myelination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ellis-Van Creveld syndrome (ortholog); hydrocephalus (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); cilium (ortholog) 3 119973291 120011547 + 30032202 116896951 MODEL JAAIVD010000012;XM_032898521 XP_032754412 coiled-coil domain containing 39;coiled-coil domain-containing protein 39 protein-coding 626126293 LOC116897418 U6 spliceosomal RNA 3 89513809 89513917 + 116897418 MODEL JAAIVD010000012;XR_004387460 snrna 626126296 LOC116898356 uncharacterized LOC116898356 4 56205743 56248871 + 30032202 116898356 MODEL JAAIVD010000003;XM_032899672 XP_032755563 uncharacterized protein LOC116898356 protein-coding 626126302 LOC116897440 U6 spliceosomal RNA 3 61655385 61655484 + 116897440 MODEL JAAIVD010000012 pseudo 626126303 LOC116901475 uncharacterized LOC116901475 5 45796809 45813414 - 116901475 MODEL JAAIVD010000023;XR_004387999 ncrna 626126308 LOC116886959 L-lactate dehydrogenase A chain-like 18 33189905 33194359 + 22301074 116886959 MODEL JAAIVD010000013;XM_032888455 XP_032744346 protein-coding 626126314 Pibf1 progesterone immunomodulatory binding factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); interleukin-4 receptor binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); cilium assembly (ortholog); mitotic metaphase chromosome alignment (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); Encephalocele (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 12 25245975 25413720 - 30032202 116913581 MODEL JAAIVD010000007;XM_032917802;XM_032917803;XM_032917804;XM_032917805;XM_032917806;XM_032917807 XP_032773693;XP_032773694;XP_032773695;XP_032773696;XP_032773697;XP_032773698 progesterone-induced-blocking factor 1 protein-coding 626126348 Gmppb GDP-mannose pyrophosphorylase B ENCODES a protein that exhibits mannose-1-phosphate guanylyltransferase (GTP) activity (ortholog); INVOLVED IN GDP-mannose biosynthetic process (ortholog); GDP-mannose biosynthetic process from mannose (ortholog); GDP-mannose metabolic process (ortholog); PARTICIPATES IN fructose and mannose metabolic pathway; fructosuria pathway; hereditary fructose intolerance syndrome pathway; ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2T (ortholog); congenital muscular dystrophy-dystroglycanopathy type A14 (ortholog); Developmental Disabilities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); GDP-mannose pyrophosphorylase complex (ortholog) 8 99377796 99380424 + 22301074;30032202 116907565 MODEL JAAIVD010000027;XM_032910589 XP_032766480 mannose-1-phosphate guanyltransferase beta protein-coding 626126361 Nfkb1 nuclear factor kappa B subunit 1 ENCODES a protein that exhibits actinin binding (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); B cell receptor signaling pathway (ortholog); canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN adenosine signaling pathway; ceramide signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); adenocarcinoma (ortholog); alcoholic hepatitis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 3 23398553 23512176 + 22301074;30032202 116896221 MODEL JAAIVD010000012;XM_032897276 XP_032753167 nuclear factor NF-kappa-B p105 subunit protein-coding 626126390 Ro60 Ro60, Y RNA binding protein ENCODES a protein that exhibits RNA binding (ortholog); U2 snRNA binding (ortholog); INVOLVED IN cellular response to interferon-alpha (ortholog); cilium assembly (ortholog); immune system development (ortholog); ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 23670090 23696453 - 22301074;30032202 116911720 MODEL JAAIVD010000005;XM_032915693 XP_032771584 60 kDa SS-A/Ro ribonucleoprotein protein-coding 626126403 LOC116901192 putative methyltransferase C9orf114 homolog 5 5441571 5449036 + 30032202 116901192 MODEL JAAIVD010000023;XM_032902884;XM_032902885 XP_032758775;XP_032758776 protein-coding 626126422 Cd81 CD81 molecule ENCODES a protein that exhibits cholesterol binding (ortholog); integrin binding (ortholog); MHC class II protein binding (ortholog); INVOLVED IN CD4-positive, alpha-beta T cell costimulation (ortholog); cellular response to low-density lipoprotein particle stimulus (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); ASSOCIATED WITH common variable immunodeficiency (ortholog); common variable immunodeficiency 6 (ortholog); hepatitis C (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 2 6635177 6651199 - 22301074;30032202 116890838 MODEL JAAIVD010000001;XM_032891366 XP_032747257 CD81 antigen protein-coding 626126434 Trabd2b TraB domain containing 2B ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); Wnt-protein binding (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); positive regulation of protein-containing complex assembly (ortholog); proteolysis (ortholog); FOUND IN nucleoplasm (ortholog); organelle membrane (ortholog); plasma membrane (ortholog) 1 41958564 42156900 - 30032202 116898852 MODEL JAAIVD010000025;XM_032900210 XP_032756101 metalloprotease TIKI2 protein-coding 626126444 LOC116893073 josephin-2-like 2 41330695 41331237 + 116893073 MODEL JAAIVD010000001 pseudo 626126445 Spice1 spindle and centriole associated protein 1 INVOLVED IN metaphase chromosome alignment (ortholog); mitotic spindle assembly (ortholog); regulation of centriole replication (ortholog); FOUND IN centriole (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 4 29233256 29275531 + 22301074;30032202 116898863 MODEL JAAIVD010000003;XM_032900231 XP_032756122 spindle and centriole-associated protein 1 protein-coding 626126467 LOC116909955 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 4-like 9 23855675 23856207 + 116909955 MODEL JAAIVD010000002 pseudo 626126468 Brinp3 BMP/retinoic acid inducible neural specific 3 INVOLVED IN cellular response to retinoic acid (ortholog); central nervous system neuron differentiation (ortholog); exploration behavior (ortholog); ASSOCIATED WITH aggressive periodontitis (ortholog); cerebral infarction (ortholog); Chronic Periodontitis (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog) 10 26000193 26400495 + 22301074;30032202 116911037 MODEL JAAIVD010000005;XM_032914782;XM_032914783;XM_032914784 XP_032770673;XP_032770674;XP_032770675 BMP/retinoic acid-inducible neural-specific protein 3 protein-coding 626126486 LOC116887307 olfactory receptor 1361-like 18 10368657 10369575 + 22301074;30032202 116887307 MODEL JAAIVD010000013;XM_032888887 XP_032744778 protein-coding 626126490 Fh fumarate hydratase ENCODES a protein that exhibits fumarate hydratase activity (ortholog); histone binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); DNA damage response (ortholog); fumarate metabolic process (ortholog); PARTICIPATES IN altered citric acid cycle pathway; citric acid cycle pathway; fumaric aciduria pathway; ASSOCIATED WITH B-lymphoblastic leukemia/lymphoma (ortholog); breast cancer (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial matrix (ortholog) 10 54121325 54147375 - 22301074;30032202 116911152 MODEL JAAIVD010000005;XM_032915007 XP_032770898 fumarate hydratase, mitochondrial protein-coding 626126504 Csn3 casein kappa INVOLVED IN lactation (ortholog); protein stabilization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN extracellular space (ortholog) 11 1046584 1053136 - 22301074;30032202 116912876 MODEL JAAIVD010000006;XM_032917112 XP_032773003 kappa-casein protein-coding 626126513 C1H8orf76 chromosome 1 C8orf76 homolog 1 232348193 232358154 - 22301074 116911696 MODEL JAAIVD010000025;XM_032915656 XP_032771547 uncharacterized protein C8orf76 homolog protein-coding 626126523 LOC116902963 histone deacetylase 1-like 1 122510600 122511591 + 116902963 MODEL JAAIVD010000025 pseudo 626126524 LOC116912241 uncharacterized LOC116912241 11 94651272 94653474 + 116912241 MODEL JAAIVD010000006;XR_004389435 ncrna 626126528 Cd151 CD151 molecule (Raph blood group) ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN cell migration (ortholog); positive regulation of cell migration (ortholog); positive regulation of endocytosis (ortholog); ASSOCIATED WITH Epidermolysis Bullosa Simplex 7, with Nephropathy and Deafness (ortholog); genetic disease (ortholog); FOUND IN basement membrane (ortholog); cell surface (ortholog) 2 8016620 8020692 - 22301074;30032202 116890865 MODEL JAAIVD010000001;XM_032891435;XM_032891436;XM_032891437 XP_032747326;XP_032747327;XP_032747328 CD151 antigen protein-coding 626126546 Cbx3 chromobox 3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); enzyme binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to dexamethasone stimulus (ortholog); DNA damage response (ortholog); heterochromatin formation (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); prostate cancer (ortholog); FOUND IN chromatin (ortholog); chromatin lock complex (ortholog); chromocenter (ortholog) 6 89610758 89624474 - 22301074;30032202 116903819 MODEL JAAIVD010000024;XM_032906529;XM_032906530;XM_032906531;XM_032906532 XP_032762420;XP_032762421;XP_032762422;XP_032762423 chromobox protein homolog 3 protein-coding 626126564 Sox21 SRY-box transcription factor 21 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN hair cycle (ortholog); hair follicle development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 12 7698918 7700412 + 22301074;30032202 116913761 MODEL JAAIVD010000007;XM_032918069 XP_032773960 transcription factor SOX-21 protein-coding 626126569 Btbd3 BTB domain containing 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cerebral cortex development (ortholog); dendrite morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 5 117822969 117853193 + 22301074;30032202 116902024 MODEL JAAIVD010000023;XM_032904297;XM_032904298 XP_032760188;XP_032760189 BTB/POZ domain-containing protein 3 protein-coding 626126581 LOC116883251 WW domain-binding protein 11-like 14 68963957 68967391 - 116883251 MODEL JAAIVD010000009 pseudo 626126582 Onecut3 one cut homeobox 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN transcription regulator complex (ortholog) 1 154370933 154388700 - 30032202 116889861 MODEL JAAIVD010000025;XM_032890687 XP_032746578 one cut domain family member 3 protein-coding 626126587 Dnai4 dynein axonemal intermediate chain 4 INVOLVED IN axonemal dynein complex assembly (ortholog); cilium movement (ortholog); hematopoietic progenitor cell differentiation (ortholog); FOUND IN axonemal dynein complex (ortholog); axoneme (ortholog); motile cilium (ortholog) 1 51467401 51542939 + 30032202 116899559 MODEL JAAIVD010000025;XM_032901459 XP_032757350 Wdr78 WD repeat domain 78;WD repeat-containing protein 78 protein-coding 626126608 LOC116905860 ferritin light chain 1-like 7 111833717 111835036 + 116905860 MODEL JAAIVD010000026 pseudo 626126609 Dnaja3 DnaJ heat shock protein family (Hsp40) member A3 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); GTPase regulator activity (ortholog); Hsp70 protein binding (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); apoptotic process (ortholog); cellular senescence (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 9 17179769 17204613 - 22301074;30032202 116909008 MODEL JAAIVD010000002;XM_032912482 XP_032768373 dnaJ homolog subfamily A member 3, mitochondrial protein-coding 626126624 LOC116888717 proteasome subunit beta type-3-like 1 100914201 100914813 - 116888717 MODEL JAAIVD010000025 pseudo 626126625 Tecpr2 tectonin beta-propeller repeat containing 2 INVOLVED IN protein exit from endoplasmic reticulum (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder type FRA12A (ortholog); genetic disease (ortholog) 7 128452480 128543683 + 22301074;30032202 116905480 MODEL JAAIVD010000026;XM_032908473;XM_032908474;XM_032908475;XM_032908476 XP_032764364;XP_032764365;XP_032764366;XP_032764367 tectonin beta-propeller repeat-containing protein 2 protein-coding 626126659 Fars2 phenylalanyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits phenylalanine-tRNA ligase activity (ortholog); tRNA binding (ortholog); INVOLVED IN phenylalanyl-tRNA aminoacylation (ortholog); tRNA processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 14 (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 14 55222038 55594407 + 22301074;30032202 116883780 MODEL JAAIVD010000009;XM_032885023 XP_032740914 phenylalanine--tRNA ligase, mitochondrial protein-coding 626126671 Znf507 zinc finger protein 507 2 162841188 162874055 + 30032202 116892259 MODEL JAAIVD010000001;XM_032893841;XM_032893842;XM_032893843;XM_032893844 XP_032749732;XP_032749733;XP_032749734;XP_032749735 protein-coding 626126688 Dr1 down-regulator of transcription 1 ENCODES a protein that exhibits RNA polymerase II general transcription initiation factor activity (ortholog); TBP-class protein binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); regulation of cell division (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN ATAC complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 18060434 18071624 + 22301074;30032202 116912303 MODEL JAAIVD010000006;XM_032916313 XP_032772204 protein Dr1 protein-coding 626126695 Fgf11 fibroblast growth factor 11 ASSOCIATED WITH intellectual disability (ortholog) 9 49402577 49409499 - 22301074;30032202 116908975 MODEL JAAIVD010000002;XM_032912438;XM_032912440 XP_032768329;XP_032768331 protein-coding 626126707 LOC116906045 calmodulin-1-like 7 45650700 45662865 - 116906045 MODEL JAAIVD010000026 pseudo 626126708 LOC116904095 cytoplasmic dynein 1 intermediate chain 1-like 6 132833610 132914588 - 22301074 116904095 MODEL JAAIVD010000024;XM_032906964;XM_032906965 XP_032762855;XP_032762856 protein-coding 626126721 Fgfbp3 fibroblast growth factor binding protein 3 ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); heparin binding (ortholog); INVOLVED IN adult behavior (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of fibroblast growth factor receptor signaling pathway (ortholog); FOUND IN extracellular region (ortholog) 2 36901868 36904189 + 30032202 116891136 MODEL JAAIVD010000001;XM_032891870 XP_032747761 fibroblast growth factor-binding protein 3 protein-coding 626126727 Nherf1 NHERF family PDZ scaffold protein 1 ENCODES a protein that exhibits beta-2 adrenergic receptor binding (ortholog); beta-catenin binding (ortholog); channel activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); auditory receptor cell stereocilium organization (ortholog); PARTICIPATES IN eicosanoid signaling pathway; parathyroid hormone signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH chronic kidney disease (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN apical part of cell (ortholog); apical plasma membrane (ortholog); brush border membrane (ortholog) 9 68921622 68939130 - 30032202 116909381 MODEL JAAIVD010000002;XM_032912936 XP_032768827 Slc9a3r1 Na(+)/H(+) exchange regulatory cofactor NHE-RF1;SLC9A3 regulator 1 protein-coding 626126737 Tfap2e transcription factor AP-2 epsilon ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog) 1 31563883 31583142 + 30032202 116886999 MODEL JAAIVD010000025;XM_032888485 XP_032744376 transcription factor AP-2-epsilon protein-coding 626126747 LOC116895327 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4-like 3 33697654 33995484 - 22301074;30032202 116895327 MODEL JAAIVD010000012;XM_032896635 XP_032752526 protein-coding 626126764 Psd4 pleckstrin and Sec7 domain containing 4 FOUND IN cleavage furrow (ortholog); ruffle membrane (ortholog) 5 12810429 12845388 - 22301074;30032202 116901338 MODEL JAAIVD010000023;XM_032903167 XP_032759058 PH and SEC7 domain-containing protein 4 protein-coding 626126785 Grik3 glutamate ionotropic receptor kainate type subunit 3 ENCODES a protein that exhibits adenylate cyclase inhibiting G protein-coupled glutamate receptor activity (ortholog); glutamate receptor activity (ortholog); glutamate-gated calcium ion channel activity (ortholog); INVOLVED IN G protein-coupled glutamate receptor signaling pathway (ortholog); glutamate receptor signaling pathway (ortholog); negative regulation of synaptic transmission, glutamatergic (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN axon (ortholog); cochlear hair cell ribbon synapse (ortholog); dendrite (ortholog) 1 32591681 32675176 - 22301074;30032202 116896760 MODEL JAAIVD010000025;XM_032898210 XP_032754101 glutamate receptor ionotropic, kainate 3 protein-coding 626126804 Tiam2 TIAM Rac1 associated GEF 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 2 195244365 195366076 - 22301074;30032202 116892866 MODEL JAAIVD010000001;XM_032894768 XP_032750659 T-lymphoma invasion and metastasis-inducing protein 2 protein-coding 626126835 Card11 caspase recruitment domain family member 11 ENCODES a protein that exhibits CARD domain binding (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell proliferation (ortholog); canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); asthma (ortholog); atopic dermatitis (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); immunological synapse (ortholog) 16 12261112 12324460 + 22301074;30032202 116885764 MODEL JAAIVD010000004;XM_032887082 XP_032742973 caspase recruitment domain-containing protein 11 protein-coding 626126863 LOC116897893 60S ribosomal protein L3-like 4 32106316 32107851 - 116897893 MODEL JAAIVD010000003 pseudo 626126864 Snf8 SNF8 subunit of ESCRT-II ENCODES a protein that exhibits channel regulator activity (ortholog); lipid binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN early endosome to late endosome transport (ortholog); endocytic recycling (ortholog); macroautophagy (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH Developmental and Epileptic Encephalopathy 115 (ortholog); Hirschsprung's disease (ortholog); NEURODEVELOPMENTAL DISORDER PLUS OPTIC ATROPHY (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endosome membrane (ortholog) 9 58347892 58360450 - 22301074;30032202 116908601 MODEL JAAIVD010000002;XM_032911824 XP_032767715 vacuolar-sorting protein SNF8 protein-coding 626126876 LOC116907374 olfactory receptor 143-like 8 32046424 32047412 + 22301074;30032202 116907374 MODEL JAAIVD010000027;XM_032910327 XP_032766218 protein-coding 626126880 Mrpl38 mitochondrial ribosomal protein L38 FOUND IN cytosol (ortholog); mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 9 67925636 67932244 + 30032202 116909899 MODEL JAAIVD010000002;XM_032913651 XP_032769542 39S ribosomal protein L38, mitochondrial protein-coding 626126893 Mob3b MOB kinase activator 3B INVOLVED IN regulation of hippo signaling (ortholog) 1 107693135 107848547 + 30032202 116902147 MODEL JAAIVD010000025;XM_032904482;XM_032904489;XM_032904497;XM_032904506 XP_032760373;XP_032760380;XP_032760388;XP_032760397 protein-coding 626126909 Pspc1 paraspeckle component 1 ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); membraneless organelle assembly (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); paraspeckles (ortholog) 12 68052989 68112310 + 22301074;30032202 116914066 MODEL JAAIVD010000007;XM_032918369 XP_032774260 protein-coding 626126922 Anxa3 annexin A3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); defense response to bacterium (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); glaucoma (ortholog); Ovarian Neoplasms (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite (ortholog) 11 7419275 7458042 - 22301074;30032202 116912659 MODEL JAAIVD010000006;XM_032916778 XP_032772669 protein-coding 626126937 Slc25a39 solute carrier family 25 member 39 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); glutathione transmembrane transporter activity (ortholog); INVOLVED IN cellular response to glutathione (ortholog); cellular response to iron ion (ortholog); glutathione import into mitochondrion (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 9 61700723 61705497 - 30032202 116908782 MODEL JAAIVD010000002;XM_032912163;XM_032912164;XM_032912165 XP_032768054;XP_032768055;XP_032768056 protein-coding 626126958 Usp32 ubiquitin specific peptidase 32 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN positive regulation of TORC1 signaling (ortholog); ASSOCIATED WITH ovarian carcinoma (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 9 85581754 85719854 + 22301074;30032202 116910151 MODEL JAAIVD010000002;XM_032914005;XM_032914006;XM_032914007 XP_032769896;XP_032769897;XP_032769898 ubiquitin carboxyl-terminal hydrolase 32 protein-coding 626127002 Mrps35 mitochondrial ribosomal protein S35 FOUND IN cytosol (ortholog); mitochondrion (ortholog) 6 4708774 4738093 + 30032202 116903099 MODEL JAAIVD010000024;XM_032905422;XM_032905423 XP_032761313;XP_032761314 28S ribosomal protein S35, mitochondrial protein-coding 626127015 Lsm14a LSM14A mRNA processing body assembly factor ENCODES a protein that exhibits double-stranded DNA binding (ortholog); double-stranded RNA binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN defense response to virus (ortholog); mitotic spindle assembly (ortholog); negative regulation of translation (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); cytoplasmic stress granule (ortholog) 2 164299832 164344322 + 30032202 116892279 MODEL JAAIVD010000001;XM_032893869;XM_032893870;XM_032893871;XM_032893872;XM_032893873;XM_032893874 XP_032749760;XP_032749761;XP_032749762;XP_032749763;XP_032749764;XP_032749765 protein LSM14 homolog A protein-coding 626127045 LOC116895075 small nucleolar RNA SNORD64 2 139978847 139978913 + 116895075 MODEL JAAIVD010000001;XR_004387244 snorna 626127048 Gpr87 G protein-coupled receptor 87 ENCODES a protein that exhibits G protein-coupled purinergic nucleotide receptor activity (ortholog); INVOLVED IN canonical glycolysis (ortholog); G protein-coupled receptor signaling pathway (ortholog); hippo signaling (ortholog) 3 95728481 95729631 + 22301074;30032202 116896838 MODEL JAAIVD010000012;XM_032898342 XP_032754233 G-protein coupled receptor 87 protein-coding 626127053 LOC116905655 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12-like 7 16128945 16129393 + 22301074;30032202 116905655 MODEL JAAIVD010000026;XM_032908628 XP_032764519 protein-coding 626127056 Fev FEV transcription factor, ETS family member ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN maternal behavior (ortholog); neuron fate specification (ortholog); neuron maturation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Myocardial Ischemia (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog) 4 148302275 148306206 - 22301074;30032202 116898231 MODEL JAAIVD010000003;XM_032899585 XP_032755476 protein FEV protein-coding 626127063 LOC116901997 uncharacterized LOC116901997 5 111754798 111772662 + 116901997 MODEL JAAIVD010000023;XR_004388033 ncrna 626127069 Kif19 kinesin family member 19 ENCODES a protein that exhibits plus-end-directed microtubule motor activity (ortholog); INVOLVED IN axonemal microtubule depolymerization (ortholog); plus-end specific microtubule depolymerization (ortholog); ASSOCIATED WITH Hydrops Fetalis (ortholog); FOUND IN cilium (ortholog) 9 74530692 74556969 - 22301074;30032202 116909648 MODEL JAAIVD010000002;XM_032913299;XM_032913300;XM_032913301 XP_032769190;XP_032769191;XP_032769192 kinesin-like protein KIF19 protein-coding 626127098 LOC116889965 olfactory receptor 6C74-like 1 162007753 162008700 - 22301074;30032202 116889965 MODEL JAAIVD010000025;XM_032890763 XP_032746654 protein-coding 626127102 LOC116893506 phospholipid hydroperoxide glutathione peroxidase-like 2 186332429 186333196 + 116893506 MODEL JAAIVD010000001 pseudo 626127103 LOC116894438 60S ribosomal protein L7a-like 2 164219571 164220374 - 22301074 116894438 MODEL JAAIVD010000001;XM_032896141 XP_032752032 protein-coding 626127107 Elof1 elongation factor 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); RNA polymerase II complex binding (ortholog); INVOLVED IN transcription-coupled nucleotide-excision repair (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) 8 18363404 18368199 - 30032202 116907751 MODEL JAAIVD010000027;XM_032910888 XP_032766779 elongation factor 1 homolog;transcription elongation factor 1 homolog protein-coding 626127115 LOC116885326 spliceosome-associated protein CWC15 homolog 16 26852562 26853388 + 30032202 116885326 MODEL JAAIVD010000004;XM_032886591 XP_032742482 protein-coding 626127120 Hic2 HIC ZBTB transcriptional repressor 2 ASSOCIATED WITH megacolon (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 4 2506185 2532362 + 22301074;30032202 116898632 MODEL JAAIVD010000003;XM_032899850;XM_032899851 XP_032755741;XP_032755742 hypermethylated in cancer 2 protein protein-coding 626127130 LOC116883423 cathepsin 7 14 76992442 76997638 + 30032202 116883423 MODEL JAAIVD010000009;XM_032884554 XP_032740445 protein-coding 626127142 Ntn3 netrin 3 ENCODES a protein that exhibits signaling receptor binding (ortholog); FOUND IN extracellular region (ortholog); Golgi apparatus (ortholog) 9 1502182 1505207 - 22301074 116908694 MODEL JAAIVD010000002;XM_032912013 XP_032767904 netrin-3 protein-coding 626127152 LOC116888094 prohibitin-like X 96393151 96393860 + 116888094 MODEL JAAIVD010000014 pseudo 626127153 LOC116900898 myosin regulatory light chain 12B-like 5 72369985 72370486 - 116900898 MODEL JAAIVD010000023 pseudo 626127154 Spata22 spermatogenesis associated 22 INVOLVED IN fertilization (ortholog); gamete generation (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH Canavan disease (ortholog); Primary Ovarian Insufficiency 25 (ortholog); Spermatogenic Failure 96 (ortholog); FOUND IN chromosome (ortholog) 9 42168605 42186060 - 30032202 116909708 MODEL JAAIVD010000002;XM_032913378 XP_032769269 spermatogenesis-associated protein 22 protein-coding 626127167 Znf276 zinc finger protein 276 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); FOUND IN kinetochore (ortholog) 17 42860647 42874209 + 22301074;30032202 116886030 MODEL JAAIVD010000011;XM_032887321 XP_032743212 protein-coding 626127182 LOC116889078 RNA-binding protein with serine-rich domain 1-like X 25833658 25834661 - 116889078 MODEL JAAIVD010000014 pseudo 626127183 LOC116898634 40S ribosomal protein S29 4 2572644 2572988 + 22301074;30032202 116898634 MODEL JAAIVD010000003;XM_032899854 XP_032755745 protein-coding 626127188 LOC116899083 retinol-binding protein 1 4 82327131 82327801 - 22301074;30032202 116899083 MODEL JAAIVD010000003;XM_032900584 XP_032756475 protein-coding 626127193 LOC116895332 elongin-B-like 3 36399722 36400072 - 22301074;30032202 116895332 MODEL JAAIVD010000012;XM_032896640 XP_032752531 protein-coding 626127196 LOC116886210 pyrethroid hydrolase Ces2a-like 17 12946728 12954326 - 30032202 116886210 MODEL JAAIVD010000011;XM_032887601 XP_032743492 protein-coding 626127212 LOC116914039 uncharacterized LOC116914039 12 60737916 60743070 - 116914039 MODEL JAAIVD010000007;XR_004389660 ncrna 626127217 Prkra protein activator of interferon induced protein kinase EIF2AK2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); enzyme binding (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to oxidative stress (ortholog); ear development (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Congenital Microtia (ortholog); Craniofacial Abnormalities (ortholog); dystonia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 53977526 53997153 - 116901547 MODEL JAAIVD010000023;XM_032903531 XP_032759422 interferon-inducible double-stranded RNA-dependent protein kinase activator A protein-coding 626127229 Timm13 translocase of inner mitochondrial membrane 13 INVOLVED IN protein insertion into mitochondrial inner membrane (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; FOUND IN fibrillar center (ortholog); mitochondrial inner membrane (ortholog); mitochondrial intermembrane space chaperone complex (ortholog) 1 153983514 153984671 + 116904738 MODEL JAAIVD010000025;XM_032907443 XP_032763334 mitochondrial import inner membrane translocase subunit Tim13 protein-coding 626127236 LOC116897448 U6 spliceosomal RNA 3 73563383 73563485 - 116897448 MODEL JAAIVD010000012;XR_004387482 snrna 626127239 LOC116888144 60S ribosomal protein L21-like X 109332077 109332549 + 116888144 MODEL JAAIVD010000014 pseudo 626127240 Tyk2 tyrosine kinase 2 ENCODES a protein that exhibits growth hormone receptor binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); interleukin-10-mediated signaling pathway (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; Interleukin-10 signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); Cocaine-Related Disorders (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); interleukin-12 receptor complex (ortholog); interleukin-23 receptor complex (ortholog) 8 17367013 17392351 - 22301074;30032202 116906863 MODEL JAAIVD010000027;XM_032909765 XP_032765656 non-receptor tyrosine-protein kinase TYK2 protein-coding 626127269 LOC116893475 T-complex protein 1 subunit zeta-like 2 180421874 180423427 - 116893475 MODEL JAAIVD010000001 pseudo 626127270 Cd2ap CD2 associated protein ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN actin filament organization (ortholog); actin filament polymerization (ortholog); adipose tissue development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); COVID-19 (ortholog); end stage renal disease (ortholog); FOUND IN actin filament (ortholog); axon (ortholog); cell leading edge (ortholog) 4 86959708 87022245 + 22301074;30032202 116899152 MODEL JAAIVD010000003;XM_032900705;XM_032900706 XP_032756596;XP_032756597 CD2-associated protein protein-coding 626127294 Thap4 THAP domain containing 4 ENCODES a protein that exhibits heme binding (ortholog); identical protein binding (ortholog); nitric oxide binding (ortholog); INVOLVED IN nitrate metabolic process (ortholog); tyrosine metabolic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 4 165631572 165672800 - 116899670 MODEL JAAIVD010000003;XM_032901684;XM_032901685 XP_032757575;XP_032757576 THAP domain-containing protein 4 protein-coding 626127307 LOC116912093 tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like 11 42363568 42364265 - 116912093 MODEL JAAIVD010000006 pseudo 626127308 LOC116910390 olfactory receptor-like protein DTMT 9 92823898 92824848 + 22301074;30032202 116910390 MODEL JAAIVD010000002;XM_032914232 XP_032770123 protein-coding 626127311 C2H10orf95 chromosome 2 C10orf95 homolog 2 45810264 45811034 - 116891248 MODEL JAAIVD010000001;XM_032892127 XP_032748018 uncharacterized protein C10orf95 homolog protein-coding 626127315 Acp4 acid phosphatase 4 ENCODES a protein that exhibits protein tyrosine phosphatase activity (ortholog); receptor tyrosine kinase binding (ortholog); INVOLVED IN negative regulation of ERBB4 signaling pathway (ortholog); negative regulation of neuron projection development (ortholog); negative regulation of protein processing (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta type 1J (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); synaptic membrane (ortholog) 2 155273438 155281804 + 30032202 116892219 MODEL JAAIVD010000001;XM_032893782;XM_032893783 XP_032749673;XP_032749674 testicular acid phosphatase protein-coding 626127335 Kntc1 kinetochore associated 1 INVOLVED IN mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); kinetochore microtubule (ortholog) 16 30032386 30105448 - 30032202 116885625 MODEL JAAIVD010000004;XM_032886927 XP_032742818 kinetochore-associated protein 1 protein-coding 626127403 LOC116912370 ribosome biogenesis protein NSA2 homolog 11 46355385 46356299 - 116912370 MODEL JAAIVD010000006;XR_004389451 pseudo 626127406 LOC116895609 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 3 162132924 162134137 - 116895609 MODEL JAAIVD010000012 pseudo 626127407 Fam13b family with sequence similarity 13 member B 15 9840655 9919758 + 22301074 116884771 MODEL JAAIVD010000010;XM_032885988;XM_032885989;XM_032885990;XM_032885991;XM_032885992;XM_032885993;XM_032885994;XM_032885995;XM_032885996;XM_032885997;XM_032885998 XP_032741879;XP_032741880;XP_032741881;XP_032741882;XP_032741883;XP_032741884;XP_032741885;XP_032741886;XP_032741887;XP_032741888;XP_032741889 protein FAM13B protein-coding 626127452 Gng5 G protein subunit gamma 5 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN positive regulation of neural precursor cell proliferation (ortholog); positive regulation of secondary heart field cardioblast proliferation (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN G-protein beta/gamma-subunit complex (ortholog) 3 14397679 14405311 - 22301074;30032202 116896168 MODEL JAAIVD010000012;XM_032897203 XP_032753094 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5 protein-coding 626127459 LOC116908204 60S ribosomal protein L35-like 8 66751791 66768943 + 116908204 MODEL JAAIVD010000027 pseudo 626127460 Tubb3 tubulin beta 3 class III ENCODES a protein that exhibits GTP binding (ortholog); netrin receptor binding (ortholog); peptide binding (ortholog); INVOLVED IN axon guidance (ortholog); dorsal root ganglion development (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular dysplasia 8 (ortholog); Breast Neoplasms (ortholog); complex cortical dysplasia with other brain malformations 1 (ortholog); FOUND IN axon (ortholog); cell periphery (ortholog); cytoplasm (ortholog) 17 43020536 43029614 + 22301074;30032202 116886252 MODEL JAAIVD010000011;XM_032887673 XP_032743564 tubulin beta-3 chain protein-coding 626127468 LOC116900563 olfactory receptor 4F3/4F16/4F29-like 5 90158540 90159490 - 22301074 116900563 MODEL JAAIVD010000023;XM_032902288 XP_032758179 protein-coding 626127471 Phlda2 pleckstrin homology like domain family A member 2 INVOLVED IN animal organ morphogenesis (ortholog); placenta development (ortholog); regulation of cell migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); lung non-small cell carcinoma (ortholog); osteosarcoma (ortholog) 2 6196883 6198435 + 30032202 116893616 MODEL JAAIVD010000001;XM_032895329;XM_032895330;XR_004386999 XP_032751220;XP_032751221 pleckstrin homology-like domain family A member 2 protein-coding 626127483 Grip1 glutamate receptor interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN cellular response to brain-derived neurotrophic factor stimulus (ortholog); cellular response to glycine (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); ASSOCIATED WITH clubfoot (ortholog); Fraser syndrome (ortholog); Fraser syndrome 1 (ortholog); FOUND IN dendrite (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 1 197666630 198050267 + 30032202 116909401 MODEL JAAIVD010000025;XM_032912970 XP_032768861 glutamate receptor-interacting protein 1 protein-coding 626127511 LOC116894363 myeloid cell surface antigen CD33-like 2 155901618 155906986 + 30032202 116894363 MODEL JAAIVD010000001;XM_032896066 XP_032751957 protein-coding 626127522 LOC116883575 putative olfactory receptor 2W6 14 42052512 42053455 + 116883575 MODEL JAAIVD010000009 pseudo 626127523 Ap1s3 adaptor related protein complex 1 subunit sigma 3 INVOLVED IN protein targeting (ortholog); ASSOCIATED WITH psoriasis (ortholog); psoriasis 15 (ortholog) 4 152676821 152736201 - 22301074;30032202 116899549 MODEL JAAIVD010000003;XM_032901443;XM_032901444 XP_032757334;XP_032757335 AP-1 complex subunit sigma-3 protein-coding 626127538 C17H16orf95 chromosome 17 C16orf95 homolog 17 41195572 41204685 - 116886033 MODEL JAAIVD010000011;XM_032887326 XP_032743217 uncharacterized protein C16orf95 homolog protein-coding 626127548 Ccdc137 coiled-coil domain containing 137 ASSOCIATED WITH schizophrenia (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 9 63562670 63567506 - 116908606 MODEL JAAIVD010000002;XM_032911829 XP_032767720 coiled-coil domain-containing protein 137 protein-coding 626127558 Gng8 G protein subunit gamma 8 INVOLVED IN cellular response to pheromone (ortholog); nervous system development (ortholog); nose development (ortholog); ASSOCIATED WITH liver disease (ortholog) 2 172195715 172199391 - 22301074;30032202 116892591 MODEL JAAIVD010000001;XM_032894368;XM_032894369;XM_032894370 XP_032750259;XP_032750260;XP_032750261 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-8 protein-coding 626127571 Arg1 arginase 1 ENCODES a protein that exhibits arginase activity (ortholog); identical protein binding (ortholog); manganese ion binding (ortholog); INVOLVED IN arginine metabolic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucagon stimulus (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; argininosuccinic aciduria pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); amino acid metabolic disorder (ortholog); FOUND IN extracellular space (ortholog); neuronal cell body (ortholog) 2 210969684 210982302 - 22301074;30032202 116892951 MODEL JAAIVD010000001;XM_032894901 XP_032750792 arginase-1 protein-coding 626127583 LOC116914019 uncharacterized LOC116914019 12 62733431 62783301 + 116914019 MODEL JAAIVD010000007;XR_004389653;XR_004389654;XR_004389655;XR_004389656 ncrna 626127597 LOC116902466 U6 spliceosomal RNA 5 139421844 139421948 + 116902466 MODEL JAAIVD010000023;XR_004388084 snrna 626127600 LOC116902051 receptor of activated protein C kinase 1-like 5 124308987 124310479 + 116902051 MODEL JAAIVD010000023 pseudo 626127601 Gdf5 growth differentiation factor 5 ENCODES a protein that exhibits BMP binding (ortholog); identical protein binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); chondroblast differentiation (ortholog); ASSOCIATED WITH acromesomelic dysplasia (ortholog); acromesomelic dysplasia, Grebe type (ortholog); acromesomelic dysplasia, Hunter-Thompson type (ortholog) 5 135301304 135305371 - 22301074;30032202 116902184 MODEL JAAIVD010000023;XM_032904547 XP_032760438 growth/differentiation factor 5 protein-coding 626127607 LOC116914752 zinc finger protein 431-like 13 20171218 20181186 - 30032202 116914752 MODEL JAAIVD010000008;XM_032919199 XP_032775090 protein-coding 626127614 Tas2r1 taste 2 receptor member 1 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) 3 148650300 148651307 - 22301074;30032202 116895592 MODEL JAAIVD010000012;XM_032896817 XP_032752708 taste receptor type 2 member 1 protein-coding 626127617 Znf689 zinc finger protein 689 ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); skeletal muscle cell differentiation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 74429570 74446651 + 22301074 116891471 MODEL JAAIVD010000001;XM_032892570;XR_004386838 XP_032748461 protein-coding 626127628 Cpsf1 cleavage and polyadenylation specific factor 1 ENCODES a protein that exhibits enzyme binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH Disease Progression (ortholog); Myopia 27 (ortholog); Stomach Neoplasms (ortholog); FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) 1 248926871 248937488 - 22301074;30032202 116913288 MODEL JAAIVD010000025;XM_032917416 XP_032773307 cleavage and polyadenylation specificity factor subunit 1 protein-coding 626127668 LOC116902586 small nucleolar RNA SNORA17 5 85460381 85460510 + 116902586 MODEL JAAIVD010000023;XR_004388178 snorna 626127671 Btf3l4 basic transcription factor 3 like 4 1 46018718 46037974 + 116899066 MODEL JAAIVD010000025;XM_032900542;XM_032900552 XP_032756433;XP_032756443 transcription factor BTF3 homolog 4 protein-coding 626127684 Rnf222 ring finger protein 222 9 48485051 48491490 + 116910518 MODEL JAAIVD010000002;XM_032914420 XP_032770311 protein-coding 626127691 LOC116911844 small nucleolar RNA SNORA17 10 41458243 41458341 + 116911844 MODEL JAAIVD010000005 pseudo 626127692 Chchd4 coiled-coil-helix-coiled-coil-helix domain containing 4 ENCODES a protein that exhibits protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); cellular response to oxidative stress (ortholog); establishment of protein localization to mitochondrion (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog) 6 55468327 55477489 + 30032202 116903501 MODEL JAAIVD010000024;XM_032906097 XP_032761988 mitochondrial intermembrane space import and assembly protein 40 protein-coding 626127699 Trnaq-uug transfer RNA glutamine (anticodon UUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 58534639 58534710 + 116910813 MODEL JAAIVD010000002 trna 626127700 LOC116905598 histone H3.3A-like 7 15116772 15117245 - 116905598 MODEL JAAIVD010000026 pseudo 626127701 Hspg2 heparan sulfate proteoglycan 2 ENCODES a protein that exhibits collagen V binding (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); brain development (ortholog); cardiac muscle tissue development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); carotid artery disease (ortholog); Childhood Schizophrenia (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog) 1 20657390 20759001 - 22301074 116894154 MODEL JAAIVD010000025;XM_032895875 XP_032751766 basement membrane-specific heparan sulfate proteoglycan core protein protein-coding 626127802 Hebp2 heme binding protein 2 ASSOCIATED WITH Liver Neoplasms (ortholog); prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 2 218340668 218345903 + 30032202 116893568 MODEL JAAIVD010000001;XM_032895274 XP_032751165 heme-binding protein 2 protein-coding 626127809 Ftcd formimidoyltransferase cyclodeaminase ENCODES a protein that exhibits formimidoyltetrahydrofolate cyclodeaminase activity (ortholog); glutamate formimidoyltransferase activity (ortholog); microtubule binding (ortholog); INVOLVED IN cytoskeleton organization (ortholog); PARTICIPATES IN folate metabolic pathway; hereditary folate malabsorption pathway; histidine metabolic pathway; ASSOCIATED WITH Bethlem Myopathy 1A (ortholog); Burkitt lymphoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 8 106555989 106569810 - 22301074 116907852 MODEL JAAIVD010000027;XM_032911042 XP_032766933 formimidoyltransferase-cyclodeaminase protein-coding 626127826 Lztr1 leucine zipper like post translational regulator 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); bladder exstrophy (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); endomembrane system (ortholog); Golgi apparatus (ortholog) 4 2761289 2777631 + 22301074;30032202 116898641 MODEL JAAIVD010000003;XM_032899866;XM_032899867 XP_032755757;XP_032755758 leucine zipper like transcription regulator 1;leucine-zipper-like transcriptional regulator 1 protein-coding 626127856 Gca grancalcin ENCODES a protein that exhibits calcium ion binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 40243518 40272923 + 22301074 116901452 MODEL JAAIVD010000023;XM_032903389;XM_032903390 XP_032759280;XP_032759281 protein-coding 626127873 LOC116909034 olfactory receptor 1496 9 44564980 44565912 - 22301074;30032202 116909034 MODEL JAAIVD010000002;XM_032912514 XP_032768405 protein-coding 626127876 LOC116906492 small nucleolar RNA U109 7 106452330 106452459 - 116906492 MODEL JAAIVD010000026;XR_004388734 snorna 626127879 Rpl13 ribosomal protein L13 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN blastocyst development (ortholog); bone development (ortholog); liver regeneration (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); spondyloepimetaphyseal dysplasia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 17 42723871 42726445 + 22301074;30032202 116886460 MODEL JAAIVD010000011;XM_032887961 XP_032743852 60S ribosomal protein L13 protein-coding 626127889 Cdc42 cell division cycle 42 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); GBD domain binding (ortholog); GTP binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament branching (ortholog); actin filament organization (ortholog); PARTICIPATES IN adenosine signaling pathway; c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; ASSOCIATED WITH Adrenal Gland Neoplasms (ortholog); Alzheimer's disease (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); cell leading edge (ortholog); cell periphery (ortholog) 1 20859956 20878384 + 22301074;30032202 116894165 MODEL JAAIVD010000025;XM_032895884;XM_032895892 XP_032751775;XP_032751783 cell division control protein 42 homolog protein-coding 626127901 LOC116905791 uncharacterized LOC116905791 1 152084566 152198688 + 116905791 MODEL JAAIVD010000025 pseudo 626127902 Zranb3 zinc finger RANBP2-type containing 3 ENCODES a protein that exhibits ATP-dependent DNA/DNA annealing activity (ortholog); DNA endonuclease activity (ortholog); DNA helicase activity (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); replication fork processing (ortholog); FOUND IN nuclear replication fork (ortholog); nucleoplasm (ortholog) 10 7680637 7764815 + 22301074;30032202 116911556 MODEL JAAIVD010000005;XM_032915547 XP_032771438 DNA annealing helicase and endonuclease ZRANB3 protein-coding 626127923 Coq7 coenzyme Q7, hydroxylase ENCODES a protein that exhibits 3-demethoxyubiquinone 3-hydroxylase (NADH) activity (ortholog); chromatin binding (ortholog); oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); determination of adult lifespan (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; ASSOCIATED WITH autosomal recessive distal hereditary motor neuronopathy 9 (ortholog); Cachexia (ortholog); Carcinoma, Lewis Lung (ortholog); FOUND IN extrinsic component of mitochondrial inner membrane (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 83123743 83132305 + 22301074;30032202 116891611 MODEL JAAIVD010000001;XM_032892810;XM_032892811 XP_032748701;XP_032748702 5-demethoxyubiquinone hydroxylase, mitochondrial protein-coding 626127938 LOC116904817 U6 spliceosomal RNA 6 6727848 6727951 - 116904817 MODEL JAAIVD010000024;XR_004388468 snrna 626127941 LOC116902602 U1 spliceosomal RNA 5 32555335 32555463 + 116902602 MODEL JAAIVD010000023 pseudo 626127942 Arid3c AT-rich interaction domain 3C ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN macrophage differentiation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); membrane raft (ortholog); nucleus (ortholog) 1 3821227 3827339 + 22301074;30032202 116885965 MODEL JAAIVD010000025;XM_032887304;XM_032887313;XM_032887314 XP_032743195;XP_032743204;XP_032743205 AT-rich interactive domain-containing protein 3C protein-coding 626127954 Ints11 integrator complex subunit 11 ENCODES a protein that exhibits RNA endonuclease activity (ortholog); INVOLVED IN RNA polymerase II transcription initiation surveillance (ortholog); snRNA 3'-end processing (ortholog); snRNA processing (ortholog); ASSOCIATED WITH neurodevelopmental disorder with motor and language delay, ocular defects, and brain abnormalities (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); INTAC complex (ortholog) 1 4741981 4760119 - 30032202 116891509 MODEL JAAIVD010000025;XM_032892646;XM_032892655;XM_032892662 XP_032748537;XP_032748546;XP_032748553 protein-coding 626127982 LOC116888993 RAC-beta serine/threonine-protein kinase-like X 13022706 13025826 - 116888993 MODEL JAAIVD010000014 pseudo 626127983 Coxfa4l2 cytochrome c oxidase hypoxia associated subunit FA4L2 ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN mitochondrion (ortholog) 1 205965337 205967515 + 116910159 MODEL JAAIVD010000025;XM_032914021 XP_032769912 Ndufa4l2 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 4-like 2;NDUFA4 mitochondrial complex associated like 2 protein-coding 626127991 Ccdc121 coiled-coil domain containing 121 7 22679481 22681688 - 116905702 MODEL JAAIVD010000026;XM_032908677 XP_032764568 coiled-coil domain-containing protein 121 protein-coding 626127995 LOC116905868 interferon alpha-inducible protein 27-like protein 2A 7 114738611 114740173 - 22301074;30032202 116905868 MODEL JAAIVD010000026;XM_032908857 XP_032764748 protein-coding 626128003 Tas2r40 taste 2 receptor member 40 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog) 6 97999528 98000487 - 22301074;30032202 116903049 MODEL JAAIVD010000024;XM_032905349 XP_032761240 taste receptor type 2 member 40 protein-coding 626128006 LOC116896064 endogenous retrovirus group K member 7 Pro protein-like 3 205766038 205766463 + 22301074 116896064 MODEL JAAIVD010000012;XM_032897054 XP_032752945 protein-coding 626128009 LOC116889636 olfactory receptor 1I1-like 116889636 MODEL JAAIVD010000020 pseudo 626128010 Zzef1 zinc finger ZZ-type and EF-hand domain containing 1 ENCODES a protein that exhibits histone binding (ortholog); ubiquitin-like protein ligase activity (ortholog); INVOLVED IN neuroblast proliferation (ortholog); protein ubiquitination (ortholog); regulation of synaptic plasticity (ortholog); FOUND IN cell surface (ortholog); postsynapse (ortholog); presynaptic active zone (ortholog) 9 42583447 42718934 - 22301074;30032202 116908842 MODEL JAAIVD010000002;XM_032912264;XM_032912265 XP_032768155;XP_032768156 zinc finger ZZ-type and EF-hand domain-containing protein 1 protein-coding 626128071 LOC116894083 40S ribosomal protein S6-like 1 71930424 71977302 - 116894083 MODEL JAAIVD010000025 pseudo 626128072 Casp1 caspase 1 ENCODES a protein that exhibits CARD domain binding (ortholog); cysteine-type endopeptidase activity (ortholog); cytokine binding (ortholog); INVOLVED IN AIM2 inflammasome complex assembly (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; type II interferon signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Albuminuria (ortholog); allergic disease (ortholog); FOUND IN AIM2 inflammasome complex (ortholog); canonical inflammasome complex (ortholog); cytoplasm (ortholog) 8 2211760 2221443 - 22301074;30032202 116907385 MODEL JAAIVD010000027;XM_032910338 XP_032766229 caspase-1 protein-coding 626128086 LOC116897819 uncharacterized LOC116897819 4 8009369 8010039 - 116897819 MODEL JAAIVD010000003 pseudo 626128087 LOC116915161 5S ribosomal RNA 13 69985515 69985632 - 116915161 MODEL JAAIVD010000008 pseudo 626128088 Cnppd1 cyclin Pas1/PHO80 domain containing 1 ASSOCIATED WITH Colorectal Neoplasms (ortholog) 4 148496718 148503606 - 22301074;30032202 116899517 MODEL JAAIVD010000003;XM_032901375;XM_032901376 XP_032757266;XP_032757267 protein CNPPD1 protein-coding 626128104 Neurod6 neuronal differentiation 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN dentate gyrus development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog) 6 85383237 85386656 + 22301074 116903751 MODEL JAAIVD010000024;XM_032906441 XP_032762332 neurogenic differentiation factor 6 protein-coding 626128110 LOC116888139 tyrosine-protein kinase Fer-like X 107936422 107938526 - 116888139 MODEL JAAIVD010000014 pseudo 626128111 Cd47 CD47 molecule ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); fibrinogen binding (ortholog); protein binding involved in heterotypic cell-cell adhesion (ortholog); INVOLVED IN ATP export (ortholog); cell migration (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN cell surface (ortholog); extracellular exosome (ortholog); glutamatergic synapse (ortholog) 4 34254085 34314838 + 30032202 116898888 MODEL JAAIVD010000003;XM_032900265;XM_032900266;XM_032900267;XM_032900268;XM_032900269;XM_032900270;XM_032900271;XR_004387671;XR_004387672 XP_032756156;XP_032756157;XP_032756158;XP_032756159;XP_032756160;XP_032756161;XP_032756162 leukocyte surface antigen CD47 protein-coding 626128145 LOC116888570 40S ribosomal protein SA-like 1 95182570 95183430 - 116888570 MODEL JAAIVD010000025 pseudo 626128146 Gtf3c5 general transcription factor IIIC subunit 5 ENCODES a protein that exhibits RNA polymerase III general transcription initiation factor activity (ortholog); INVOLVED IN skeletal muscle cell differentiation (ortholog); PARTICIPATES IN RNA polymerase III transcription pathway; FOUND IN nucleoplasm (ortholog); transcription factor TFIIIC complex (ortholog) 5 8090661 8110251 + 30032202 116901228 MODEL JAAIVD010000023;XM_032902965;XM_032902966 XP_032758856;XP_032758857 general transcription factor 3C polypeptide 5 protein-coding 626128166 LOC116888766 ubiquitin-60S ribosomal protein L40-like X 30247315 30247723 + 116888766 MODEL JAAIVD010000014 pseudo 626128167 Epha5 EPH receptor A5 ENCODES a protein that exhibits ephrin receptor activity (ortholog); GPI-linked ephrin receptor activity (ortholog); growth factor binding (ortholog); INVOLVED IN axon guidance (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); cellular response to forskolin (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malignant astrocytoma (ortholog); FOUND IN adherens junction (ortholog); axon (ortholog); cell periphery (ortholog) 11 40535752 40889501 - 22301074;30032202 116912872 MODEL JAAIVD010000006;XM_032917095;XM_032917097;XM_032917098;XM_032917099;XM_032917100;XM_032917101;XM_032917102;XM_032917103 XP_032772986;XP_032772988;XP_032772989;XP_032772990;XP_032772991;XP_032772992;XP_032772993;XP_032772994 ephrin type-A receptor 5 protein-coding 626128203 Cntnap4 contactin associated protein family member 4 ENCODES a protein that exhibits PDZ domain binding (ortholog); INVOLVED IN modulation of chemical synaptic transmission (ortholog); neural precursor cell proliferation (ortholog); neuron differentiation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN dendrite (ortholog); GABA-ergic synapse (ortholog); plasma membrane (ortholog) 17 31913038 32578792 + 116886586 MODEL JAAIVD010000011;XM_032888110;XM_032888111 XP_032744001;XP_032744002 contactin-associated protein-like 4 protein-coding 626128234 LOC116903949 high mobility group protein B1-like 6 101440464 101441088 - 116903949 MODEL JAAIVD010000024 pseudo 626128235 Znf14 zinc finger protein 14 13 11980505 11992014 - 30032202 116914534 MODEL JAAIVD010000008;XM_032918863 XP_032774754 protein-coding 626128244 Manba mannosidase beta ENCODES a protein that exhibits beta-mannosidase activity (ortholog); D-mannose binding (ortholog); hydrolase activity (ortholog); INVOLVED IN glycoprotein catabolic process (ortholog); ASSOCIATED WITH beta-mannosidosis (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN extracellular space (ortholog) 3 23524334 23608241 - 22301074;30032202 116896222 MODEL JAAIVD010000012;XM_032897277 XP_032753168 beta-mannosidase protein-coding 626128265 LOC116885086 U6 spliceosomal RNA 15 24166187 24166291 - 116885086 MODEL JAAIVD010000010;XR_004385958 snrna 626128268 Slc25a35 solute carrier family 25 member 35 ASSOCIATED WITH Cardiac Arrhythmias (ortholog); FOUND IN mitochondrion (ortholog) 9 48564468 48568929 + 116909630 MODEL JAAIVD010000002;XM_032913269 XP_032769160 protein-coding 626128277 LOC116886784 CAMPATH-1 antigen 1 24145729 24147315 + 30032202 116886784 MODEL JAAIVD010000025;XM_032888232;XM_032888233 XP_032744123;XP_032744124 protein-coding 626128287 LOC116905840 histone H3.3A-like 7 108827866 108828288 + 116905840 MODEL JAAIVD010000026 pseudo 626128288 Dchs2 dachsous cadherin-related 2 INVOLVED IN condensed mesenchymal cell proliferation (ortholog); nephron development (ortholog); ASSOCIATED WITH Multiple Abnormalities (ortholog); prostate cancer (ortholog) 3 70196905 70401723 - 22301074;30032202 116896743 MODEL JAAIVD010000012;XM_032898182 XP_032754073 protocadherin-23 protein-coding 626128312 Rps10 ribosomal protein S10 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); tRNA binding (ortholog); INVOLVED IN ribosomal small subunit assembly (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia (ortholog); Diamond-Blackfan anemia 9 (ortholog); Liver Failure (ortholog); FOUND IN cytosol (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 18 6211715 6216294 + 30032202 116886878 MODEL JAAIVD010000013;XM_032888334 XP_032744225 40S ribosomal protein S10 protein-coding 626128322 LOC116888007 zinc finger protein GLI2-like X 78750471 78756716 + 116888007 MODEL JAAIVD010000014 pseudo 626128323 LOC116907136 N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein-like 8 39489742 39491053 + 116907136 MODEL JAAIVD010000027 pseudo 626128324 LOC116893181 uncharacterized LOC116893181 2 103629937 103631426 - 116893181 MODEL JAAIVD010000001 pseudo 626128325 Prp4k pre-mRNA processing factor kinase PRP4K ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN hippo signaling (ortholog); positive regulation of hippo signaling (ortholog); positive regulation of protein export from nucleus (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); chromosome (ortholog); kinetochore (ortholog) 14 53387000 53421137 + 22301074;30032202 116884045 MODEL JAAIVD010000009;XM_032885291 XP_032741182 Prpf4b pre-mRNA processing factor 4B;serine/threonine-protein kinase PRP4 homolog protein-coding 626128344 LOC116886154 60S ribosomal protein L7-like 17 35942225 35951965 - 116886154 MODEL JAAIVD010000011 pseudo 626128345 Mocs1 molybdenum cofactor synthesis 1 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); cyclic pyranopterin monophosphate synthase activity (ortholog); GTP 3',8'-cyclase activity (ortholog); INVOLVED IN Mo-molybdopterin cofactor biosynthetic process (ortholog); molybdopterin cofactor biosynthetic process (ortholog); PARTICIPATES IN molybdenum cofactor biosynthetic pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); molybdenum cofactor deficiency (ortholog); FOUND IN cytosol (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 80483591 80503569 - 22301074;30032202 116899063 MODEL JAAIVD010000003;XM_032900534 XP_032756425 molybdenum cofactor biosynthesis protein 1 protein-coding 626128360 LOC116893495 vomeronasal type-2 receptor 116-like 2 183117434 183127600 - 116893495 MODEL JAAIVD010000001 pseudo 626128361 Cys1 cystin 1 ENCODES a protein that exhibits chromatin binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN inner ear development (ortholog); kidney development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); stomach cancer (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 7 38280121 38294082 - 116904916 MODEL JAAIVD010000026;XM_032907524 XP_032763415 cystin-1 protein-coding 626128368 Scnn1b sodium channel epithelial 1 subunit beta ENCODES a protein that exhibits ligand-gated sodium channel activity (ortholog); sodium channel activity (ortholog); sodium ion transmembrane transporter activity (ortholog); INVOLVED IN aldosterone metabolic process (ortholog); artery smooth muscle contraction (ortholog); blood circulation (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH Adrenal Insufficiency (ortholog); autism spectrum disorder (ortholog); autosomal recessive pseudohypoaldosteronism type 1 (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); external side of plasma membrane (ortholog) 2 79897501 79957456 - 22301074;30032202 116891567 MODEL JAAIVD010000001;XM_032892746 XP_032748637 amiloride-sensitive sodium channel subunit beta protein-coding 626128385 LOC116913705 olfactory receptor 4K5 12 73062859 73063830 + 22301074 116913705 MODEL JAAIVD010000007;XM_032918000 XP_032773891 protein-coding 626128388 LOC116909163 40S ribosomal protein S2-like 9 3703663 3710128 - 116909163 MODEL JAAIVD010000002 pseudo 626128389 LOC116885532 uncharacterized LOC116885532 16 8691478 8694401 - 116885532 MODEL JAAIVD010000004;XR_004386015 ncrna 626128393 Nr1h2 nuclear receptor subfamily 1 group H member 2 ENCODES a protein that exhibits apolipoprotein A-I receptor binding (ortholog); ATPase binding (ortholog); chromatin DNA binding (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); lipid homeostasis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH atherosclerosis (ortholog); cholestasis (ortholog); Experimental Arthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 2 154978803 154984188 + 22301074;30032202 116892201 MODEL JAAIVD010000001;XM_032893739;XM_032893740;XM_032893741;XM_032893742;XM_032893743 XP_032749630;XP_032749631;XP_032749632;XP_032749633;XP_032749634 oxysterols receptor LXR-beta protein-coding 626128425 LOC116890303 ras-related protein Rap-1b-like 1 264829004 264829911 + 116890303 MODEL JAAIVD010000025 pseudo 626128426 Mpp3 MAGUK p55 scaffold protein 3 ENCODES a protein that exhibits PDZ domain binding (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); plasma membrane (ortholog) 9 61289191 61317828 - 22301074;30032202 116909453 MODEL JAAIVD010000002;XM_032913032 XP_032768923 MAGUK p55 subfamily member 3;membrane palmitoylated protein 3 protein-coding 626128449 LOC116897909 60S acidic ribosomal protein P0-like 4 17400472 17401577 - 116897909 MODEL JAAIVD010000003 pseudo 626128450 LOC116897829 ubiquitin carboxyl-terminal hydrolase isozyme L3-like 1 90946831 90951057 + 116897829 MODEL JAAIVD010000025 pseudo 626128451 LOC116912040 phosphoglucomutase-1-like 11 80458172 80459239 + 116912040 MODEL JAAIVD010000006 pseudo 626128452 LOC116910680 small nucleolar RNA SNORA42/SNORA80 family 9 71891984 71892114 + 116910680 MODEL JAAIVD010000002;XR_004389211 snorna 626128455 LOC116910075 CMRF-35-like molecule 4 9 69171845 69176064 - 30032202 116910075 MODEL JAAIVD010000002;XM_032913890 XP_032769781 protein-coding 626128462 Grin2c glutamate ionotropic receptor NMDA type subunit 2C ENCODES a protein that exhibits glutamate binding (ortholog); glutamate-gated receptor activity (ortholog); monoatomic cation channel activity (ortholog); INVOLVED IN calcium ion transmembrane import into cytosol (ortholog); directional locomotion (ortholog); excitatory postsynaptic potential (ortholog); FOUND IN glutamatergic synapse (ortholog); NMDA selective glutamate receptor complex (ortholog); plasma membrane (ortholog) 9 68836215 68854067 + 22301074;30032202 116909356 MODEL JAAIVD010000002;XM_032912903 XP_032768794 glutamate receptor ionotropic, NMDA 2C protein-coding 626128480 Irak4 interleukin 1 receptor associated kinase 4 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); interleukin-1-mediated signaling pathway (ortholog); interleukin-33-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; Toll-like receptor signaling pathway; ASSOCIATED WITH Animal Disease Models (ortholog); Bacterial Infections and Mycoses (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog) 1 267429005 267455882 + 22301074;30032202 116884320 MODEL JAAIVD010000025;XM_032885458 XP_032741349 interleukin-1 receptor-associated kinase 4 protein-coding 626128496 LOC116889249 adenylosuccinate lyase-like X 54691938 54693369 + 116889249 MODEL JAAIVD010000014 pseudo 626128497 LOC116889934 olfactory receptor 6C6-like 1 161092633 161093619 + 22301074;30032202 116889934 MODEL JAAIVD010000025;XM_032890745 XP_032746636 protein-coding 626128501 Akap4 A-kinase anchoring protein 4 ENCODES a protein that exhibits protein kinase A binding (ortholog); INVOLVED IN cell surface receptor protein serine/threonine kinase signaling pathway (ortholog); establishment of localization in cell (ortholog); establishment of protein localization (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Asthenozoospermia (ortholog); male infertility (ortholog); Teratozoospermia (ortholog); FOUND IN cilium (ortholog); motile cilium (ortholog); perinuclear region of cytoplasm (ortholog) X 15038890 15048716 - 30032202 116889152 MODEL JAAIVD010000014;XM_032890318 XP_032746209 A-kinase anchor protein 4 protein-coding 626128510 Shisa5 shisa family member 5 ENCODES a protein that exhibits WW domain binding (ortholog); INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear envelope (ortholog) 8 100310436 100326012 + 30032202 116907634 MODEL JAAIVD010000027;XM_032910694;XM_032910695;XM_032910696 XP_032766585;XP_032766586;XP_032766587 protein shisa-5 protein-coding 626128526 Rps25 ribosomal protein S25 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); ribosomal small subunit assembly (ortholog); ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog) 8 38954540 38957501 + 30032202 116906584 MODEL JAAIVD010000027;XM_032909323 XP_032765214 40S ribosomal protein S25 protein-coding 626128535 Atp6ap1 ATPase H+ transporting accessory protein 1 ENCODES a protein that exhibits ATPase activator activity (ortholog); small GTPase binding (ortholog); transporter activator activity (ortholog); INVOLVED IN cellular response to increased oxygen levels (ortholog); endosome to plasma membrane protein transport (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ii (ortholog); congenital disorder of glycosylation type II (ortholog); follicular lymphoma (ortholog); FOUND IN endosome membrane (ortholog); membrane (ortholog); synaptic vesicle membrane (ortholog) X 128299348 128306971 + 30032202 116887797 MODEL JAAIVD010000014;XM_032889321 XP_032745212 V-type proton ATPase subunit S1 protein-coding 626128549 Plcb3 phospholipase C beta 3 ENCODES a protein that exhibits calmodulin binding (ortholog); molecular adaptor activity (ortholog); molecular function activator activity (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); inositol trisphosphate metabolic process (ortholog); phosphatidylinositol catabolic process (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphaq family; protein kinase C (PKC) signaling pathway; ASSOCIATED WITH chronic ulcer of skin (ortholog); Experimental Diabetes Mellitus (ortholog); Huntington's disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); postsynaptic cytosol (ortholog) 2 826336 842507 + 22301074;30032202 116894814 MODEL JAAIVD010000001;XM_032896483 XP_032752374 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 protein-coding 626128584 LOC116889213 golgin-45-like X 5219832 5221612 - 116889213 MODEL JAAIVD010000014 pseudo 626128585 LOC116893115 deleted in malignant brain tumors 1 protein-like 2 70538998 70664589 - 22301074;30032202 116893115 MODEL JAAIVD010000001;XM_032895053 XP_032750944 protein-coding 626128654 LOC116900154 60 kDa heat shock protein, mitochondrial-like 5 22549468 22557427 + 116900154 MODEL JAAIVD010000023 pseudo 626128655 Ppy pancreatic polypeptide ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 9 61393431 61394714 - 22301074;30032202 116910031 MODEL JAAIVD010000002;XM_032913817 XP_032769708 pancreatic prohormone protein-coding 626128663 Thsd7a thrombospondin type 1 domain containing 7A INVOLVED IN actin cytoskeleton organization (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN plasma membrane (ortholog); podocyte foot (ortholog) 6 126087535 126502586 + 30032202 116904073 MODEL JAAIVD010000024;XM_032906937 XP_032762828 thrombospondin type-1 domain-containing protein 7A protein-coding 626128695 Rpusd3 RNA pseudouridine synthase D3 INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); ribonucleoprotein granule (ortholog) 6 33122348 33130392 + 22301074 116903416 MODEL JAAIVD010000024;XM_032905937;XM_032905938;XM_032905939 XP_032761828;XP_032761829;XP_032761830 mitochondrial mRNA pseudouridine synthase RPUSD3 protein-coding 626128713 LOC116894099 olfactory receptor 688-like 2 103440737 103441690 + 22301074 116894099 MODEL JAAIVD010000001;XM_032895819 XP_032751710 protein-coding 626128717 LOC116899330 uncharacterized LOC116899330 4 117423888 117498708 - 116899330 MODEL JAAIVD010000003;XR_004387704 ncrna 626128722 LOC116898292 40S ribosomal protein S10-like 4 177781237 177781723 + 116898292 MODEL JAAIVD010000003 pseudo 626128723 Ppm1m protein phosphatase, Mg2+/Mn2+ dependent 1M ENCODES a protein that exhibits manganese ion binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN protein dephosphorylation (ortholog); FOUND IN nucleus (ortholog) 8 97501249 97507130 - 30032202 116907691 MODEL JAAIVD010000027;XM_032910797;XM_032910798;XM_032910799 XP_032766688;XP_032766689;XP_032766690 protein phosphatase 1M protein-coding 626128744 LOC116914988 igE-binding protein-like 13 25428582 25430300 + 22301074 116914988 MODEL JAAIVD010000008;XM_032919396 XP_032775287 protein-coding 626128748 Prrc2c proline rich coiled-coil 2C INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); stress granule assembly (ortholog); FOUND IN cytosol (ortholog) 10 41929247 41996751 - 30032202 116911374 MODEL JAAIVD010000005;XM_032915305;XM_032915306;XM_032915308;XM_032915309;XM_032915310;XM_032915311;XM_032915312;XM_032915313;XM_032915314;XM_032915315;XM_032915316 XP_032771196;XP_032771197;XP_032771199;XP_032771200;XP_032771201;XP_032771202;XP_032771203;XP_032771204;XP_032771205;XP_032771206;XP_032771207 protein PRRC2C protein-coding 626128809 Ecscr endothelial cell surface expressed chemotaxis and apoptosis regulator INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of endothelial cell apoptotic process (ortholog); positive regulation of proteasomal protein catabolic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 15 8652336 8660410 + 30032202 116884705 MODEL JAAIVD010000010;XM_032885893 XP_032741784 endothelial cell-specific chemotaxis regulator protein-coding 626128818 Mthfr methylenetetrahydrofolate reductase ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); methylenetetrahydrofolate reductase (NADPH) activity (ortholog); methylenetetrahydrofolate reductase [NAD(P)H] activity (ortholog); INVOLVED IN heterochromatin organization (ortholog); homocysteine metabolic process (ortholog); methionine biosynthetic process (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; altered folate mediated one-carbon metabolic pathway; folate cycle metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute kidney failure (ortholog); acute lymphoblastic leukemia (ortholog); FOUND IN cytosol (ortholog) 1 12723496 12739595 - 22301074;30032202 116892893 MODEL JAAIVD010000025;XM_032894805;XM_032894814;XM_032894823;XM_032894831;XM_032894840 XP_032750696;XP_032750705;XP_032750714;XP_032750722;XP_032750731 protein-coding 626128849 LOC116888488 transcription factor SPT20 homolog X 51898394 51903918 + 116888488 MODEL JAAIVD010000014 pseudo 626128850 LOC116883981 prolactin 14 46089350 46099375 + 22301074;30032202 116883981 MODEL JAAIVD010000009;XM_032885212;XM_032885213;XM_032885214;XM_032885215;XM_032885216;XM_032885217 XP_032741103;XP_032741104;XP_032741105;XP_032741106;XP_032741107;XP_032741108 protein-coding 626128872 LOC116914567 zinc finger protein 709-like 13 11906249 11919986 - 30032202 116914567 MODEL JAAIVD010000008;XM_032918923 XP_032774814 protein-coding 626128881 Mcmdc2 minichromosome maintenance domain containing 2 INVOLVED IN double-strand break repair involved in meiotic recombination (ortholog); late meiotic recombination nodule assembly (ortholog); meiotic recombination nodule assembly (ortholog); ASSOCIATED WITH azoospermia (ortholog); spermatogenic failure 57 (ortholog) 1 144668914 144702800 + 22301074;30032202 116903855 MODEL JAAIVD010000025;XM_032906600 XP_032762491 minichromosome maintenance domain-containing protein 2 protein-coding 626128899 LOC116894923 small nucleolar RNA SNORD28 2 9216356 9216430 - 116894923 MODEL JAAIVD010000001;XR_004387122 snorna 626128902 Pkdrej polycystin family receptor for egg jelly INVOLVED IN regulation of acrosome reaction (ortholog); FOUND IN nucleus (ortholog); sperm plasma membrane (ortholog) 1 255163931 255171130 - 22301074;30032202 116890168 MODEL JAAIVD010000025;XM_032890903 XP_032746794 polycystic kidney disease and receptor for egg jelly-related protein protein-coding 626128907 LOC116898273 olfactory receptor 12-like 4 164512485 164513455 + 22301074;30032202 116898273 MODEL JAAIVD010000003;XM_032899625 XP_032755516 protein-coding 626128910 LOC116887215 sugar phosphate exchanger 3-like 18 11223656 11225000 + 116887215 MODEL JAAIVD010000013 pseudo 626128911 LOC116886613 E3 SUMO-protein ligase NSE2-like 17 13597596 13598237 - 116886613 MODEL JAAIVD010000011 pseudo 626128912 LOC116896572 60S ribosomal protein L35a-like 3 62160254 62160754 - 116896572 MODEL JAAIVD010000012 pseudo 626128913 Sgms2 sphingomyelin synthase 2 ENCODES a protein that exhibits ceramide cholinephosphotransferase activity (ortholog); ceramide phosphoethanolamine synthase activity (ortholog); sphingomyelin synthase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); ceramide phosphoethanolamine biosynthetic process (ortholog); regulation of bone mineralization (ortholog); ASSOCIATED WITH calvarial doughnut lesions with bone fragility (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); nucleoplasm (ortholog) 3 27471366 27542695 + 30032202 116896240 MODEL JAAIVD010000012;XM_032897306 XP_032753197 phosphatidylcholine:ceramide cholinephosphotransferase 2 protein-coding 626128923 LOC116907233 olfactory receptor 7G1-like 8 15804705 15805681 - 116907233 MODEL JAAIVD010000027 pseudo 626128924 Fam20b FAM20B glycosaminoglycan xylosylkinase ENCODES a protein that exhibits phosphotransferase activity, alcohol group as acceptor (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 10 36030304 36053770 - 30032202 116911105 MODEL JAAIVD010000005;XM_032914947 XP_032770838 glycosaminoglycan xylosylkinase protein-coding 626128935 LOC116897140 heterogeneous nuclear ribonucleoprotein A1-like 3 172307865 172310527 - 116897140 MODEL JAAIVD010000012 pseudo 626128936 LOC116910276 olfactory receptor 1361-like 9 38609977 38623247 - 116910276 MODEL JAAIVD010000002 pseudo 626128937 Fbxo42 F-box protein 42 1 16939439 16999381 - 22301074 116893408 MODEL JAAIVD010000025;XM_032895194 XP_032751085 F-box only protein 42 protein-coding 626128951 LOC116900354 olfactory receptor 5W2-like 5 69226322 69227254 - 22301074;30032202 116900354 MODEL JAAIVD010000023;XM_032902108 XP_032757999 protein-coding 626128955 LOC116906823 olfactory receptor 8B3-like 8 32249999 32250934 + 22301074;30032202 116906823 MODEL JAAIVD010000027;XM_032909706 XP_032765597 protein-coding 626128959 Cul1 cullin 1 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); antiviral innate immune response (ortholog); apoptotic process (ortholog); PARTICIPATES IN neddylation pathway; Notch signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH Stevens-Johnson syndrome (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); Parkin-FBXW7-Cul1 ubiquitin ligase complex (ortholog); plasma membrane (ortholog) 6 93226734 93295038 - 22301074;30032202 116903881 MODEL JAAIVD010000024;XM_032906633;XM_032906634;XM_032906635;XM_032906636;XM_032906637 XP_032762524;XP_032762525;XP_032762526;XP_032762527;XP_032762528 cullin-1 protein-coding 626129002 LOC116895340 serine/arginine-rich splicing factor 3-like 3 40300045 40300573 + 116895340 MODEL JAAIVD010000012 pseudo 626129003 Bpifb6 BPI fold containing family B member 6 5 133233561 133245752 + 22301074 116900711 MODEL JAAIVD010000023;XM_032902417 XP_032758308 BPI fold-containing family B member 6 protein-coding 626129023 Pgm2 phosphoglucomutase 2 ENCODES a protein that exhibits phosphoglucomutase activity (ortholog); phosphopentomutase activity (ortholog); INVOLVED IN glucose metabolic process (ortholog); glycogen biosynthetic process (ortholog); glycogen catabolic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; glycogen degradation pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog) 11 21126328 21163770 + 22301074;30032202 116912220 MODEL JAAIVD010000006;XM_032916176;XM_032916177 XP_032772067;XP_032772068 phosphoglucomutase-2 protein-coding 626129047 Gucy1a1 guanylate cyclase 1 soluble subunit alpha 1 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); cytidylate cyclase activity (ortholog); guanylate cyclase activity (ortholog); INVOLVED IN cGMP biosynthetic process (ortholog); nitric oxide-cGMP-mediated signaling (ortholog); positive regulation of nitric oxide mediated signal transduction (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Colonic Neoplasms (ortholog); coronary artery disease (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); guanylate cyclase complex, soluble (ortholog) 3 71414408 71471104 + 22301074;30032202 116896750 MODEL JAAIVD010000012;XM_032898193;XM_032898194 XP_032754084;XP_032754085 guanylate cyclase soluble subunit alpha-1 protein-coding 626129063 LOC116914969 adenylyl cyclase-associated protein 1-like 13 18867430 18868402 - 116914969 MODEL JAAIVD010000008 pseudo 626129064 LOC116911900 U8 small nucleolar RNA 10 62193854 62193975 - 116911900 MODEL JAAIVD010000005;XR_004389407 snorna 626129067 LOC116897877 60S ribosomal protein L35-like 4 23006925 23008184 - 116897877 MODEL JAAIVD010000003 pseudo 626129068 Znf503 zinc finger protein 503 INVOLVED IN G1 to G0 transition involved in cell differentiation (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of gene expression (ortholog) 12 91759380 91764013 - 30032202 116913720 MODEL JAAIVD010000007;XM_032918020 XP_032773911 protein-coding 626129074 LOC116905679 coiled-coil domain-containing protein 7-like 7 13576153 13627925 - 116905679 MODEL JAAIVD010000026;XM_032908661;XM_032908662;XM_032908663 XP_032764552;XP_032764553;XP_032764554 protein-coding 626129095 Emd emerin ENCODES a protein that exhibits actin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to growth factor stimulus (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Charcot-Marie-Tooth disease type 2 (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cortical endoplasmic reticulum (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) X 128259210 128262358 + 30032202 116889031 MODEL JAAIVD010000014;XM_032890230 XP_032746121 protein-coding 626129105 LOC116895813 60S ribosomal protein L7a-like 3 70863288 70947113 - 116895813 MODEL JAAIVD010000012 pseudo 626129106 Lin7b lin-7 cell polarity scaffold B ENCODES a protein that exhibits PDZ domain binding (ortholog); protein domain specific binding (ortholog); protein kinase binding (ortholog); INVOLVED IN neurotransmitter secretion (ortholog); FOUND IN cell-cell junction (ortholog); plasma membrane (ortholog); postsynaptic density, intracellular component (ortholog) 2 154139090 154142062 + 30032202 116892157 MODEL JAAIVD010000001;XM_032893653;XR_004386919;XR_004386920 XP_032749544 lin-7 homolog B, crumbs cell polarity complex component;protein lin-7 homolog B protein-coding 626129122 Trnal-uaa transfer RNA leucine (anticodon UAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 2 224288621 224288703 + 116895134 MODEL JAAIVD010000001 trna 626129123 LOC116893530 zinc finger protein 664-like 2 199747199 199756803 + 22301074 116893530 MODEL JAAIVD010000001;XM_032895257 XP_032751148 protein-coding 626129129 LOC116904797 U2 spliceosomal RNA 6 139896061 139896136 - 116904797 MODEL JAAIVD010000024 pseudo 626129130 Lpar1 lysophosphatidic acid receptor 1 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); lysophosphatidic acid binding (ortholog); lysophosphatidic acid receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); bleb assembly (ortholog); cell chemotaxis (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); dendritic shaft (ortholog); dendritic spine (ortholog) 1 93064601 93135258 + 22301074;30032202 116901603 MODEL JAAIVD010000025;XM_032903633;XM_032903643;XM_032903651 XP_032759524;XP_032759534;XP_032759542 protein-coding 626129143 LOC116900009 alpha-endosulfine-like 5 9768596 9769609 - 30032202 116900009 MODEL JAAIVD010000023;XM_032901811 XP_032757702 protein-coding 626129148 LOC116894434 ribosome biogenesis protein NSA2 homolog 2 160385729 160386657 + 116894434 MODEL JAAIVD010000001 pseudo 626129149 Yipf2 Yip1 domain family member 2 FOUND IN Golgi medial cisterna (ortholog); Golgi trans cisterna (ortholog); trans-Golgi network (ortholog) 8 17851616 17863085 - 22301074;30032202 116908135 MODEL JAAIVD010000027;XM_032911428;XM_032911429 XP_032767319;XP_032767320 protein YIPF2 protein-coding 626129165 LOC116906307 U6 spliceosomal RNA 7 66024068 66024174 + 116906307 MODEL JAAIVD010000026;XR_004388595 snrna 626129168 Fbxl5 F-box and leucine rich repeat protein 5 ENCODES a protein that exhibits iron ion binding (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN iron homeostasis pathway; ASSOCIATED WITH prostate cancer (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog); SCF ubiquitin ligase complex (ortholog) 11 61979257 62017226 + 22301074;30032202 116912908 MODEL JAAIVD010000006;XM_032917166 XP_032773057 F-box/LRR-repeat protein 5 protein-coding 626129183 Dok3 docking protein 3 INVOLVED IN Ras protein signal transduction (ortholog); ASSOCIATED WITH colorectal adenocarcinoma (ortholog); lung adenocarcinoma (ortholog); Lung Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 14 73839227 73844469 - 30032202 116883877 MODEL JAAIVD010000009;XM_032885143 XP_032741034 protein-coding 626129192 Urod uroporphyrinogen decarboxylase ENCODES a protein that exhibits ferrous iron binding (ortholog); uroporphyrinogen decarboxylase activity (ortholog); INVOLVED IN cellular response to arsenic-containing substance (ortholog); heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH breast cancer (ortholog); genetic disease (ortholog); Head and Neck Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 40621204 40625481 - 22301074;30032202 116898544 MODEL JAAIVD010000025;XM_032899760 XP_032755651 protein-coding 626129206 LOC116891581 cytochrome b-c1 complex subunit 2, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN response to xenobiotic stimulus (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 5 (ortholog); obesity (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 81136245 81163111 - 22301074;30032202 116891581 MODEL JAAIVD010000001;XM_032892761 XP_032748652 protein-coding 626129224 Ankrd65 ankyrin repeat domain 65 1 4837510 4839734 - 22301074;30032202 116891594 MODEL JAAIVD010000025;XM_032892788 XP_032748679 ankyrin repeat domain-containing protein 65 protein-coding 626129230 LOC116903196 C-type lectin domain family 2 member D-related protein 6 18863997 18874461 + 30032202 116903196 MODEL JAAIVD010000024;XM_032905573 XP_032761464 protein-coding 626129239 Ly6l lymphocyte antigen 6 family member L 1 247850759 247853258 + 30032202 116890146 MODEL JAAIVD010000025;XM_032890881 XP_032746772 lymphocyte antigen 6L protein-coding 626129246 LOC116910165 uncharacterized LOC116910165 9 70010317 70011846 - 116910165 MODEL JAAIVD010000002;XR_004389139 ncrna 626129250 Hps6 HPS6 biogenesis of lysosomal organelles complex 2 subunit 3 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN blood coagulation (ortholog); lipid homeostasis (ortholog); lipid metabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytosol (ortholog); lysosomal membrane (ortholog) 2 45478347 45481035 + 30032202 116891234 MODEL JAAIVD010000001;XM_032892087 XP_032747978 Hermansky-Pudlak syndrome 6 protein protein-coding 626129255 Ppp1r17 protein phosphatase 1 regulatory subunit 17 ENCODES a protein that exhibits phosphatase inhibitor activity (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN regulation of phosphatase activity (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); Hypercholesterolemia (ortholog) 6 85029200 85045574 - 30032202 116903750 MODEL JAAIVD010000024;XM_032906438;XM_032906439 XP_032762329;XP_032762330 protein-coding 626129268 Tmem163 transmembrane protein 163 ENCODES a protein that exhibits zinc ion binding (ortholog); INVOLVED IN myelination (ortholog); zinc export across plasma membrane (ortholog); zinc ion import into synaptic vesicle (ortholog); ASSOCIATED WITH hypomyelinating leukodystrophy 25 (ortholog); proteinuria (ortholog); FOUND IN early endosome membrane (ortholog); intracellular vesicle (ortholog); plasma membrane (ortholog) 10 8075735 8250199 + 30032202 116911189 MODEL JAAIVD010000005;XM_032915059 XP_032770950 protein-coding 626129280 LOC116909107 eukaryotic translation initiation factor 5A-1-like 9 25760960 25761431 + 116909107 MODEL JAAIVD010000002 pseudo 626129281 Mrpl32 mitochondrial ribosomal protein L32 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 14 33481666 33484527 - 22301074;30032202 116883858 MODEL JAAIVD010000009;XM_032885126 XP_032741017 39S ribosomal protein L32, mitochondrial protein-coding 626129288 LOC116900454 olfactory receptor 4P4-like 5 71098088 71099038 + 22301074 116900454 MODEL JAAIVD010000023;XM_032902194 XP_032758085 protein-coding 626129291 LOC116911739 olfactory receptor 11H6-like 10 52750498 52751833 + 22301074 116911739 MODEL JAAIVD010000005;XM_032915719 XP_032771610 protein-coding 626129295 LOC116907613 uncharacterized LOC116907613 8 9966482 9988441 - 116907613 MODEL JAAIVD010000027;XR_004388830;XR_004388831 ncrna 626129303 LOC116911473 28S ribosomal protein S11, mitochondrial-like 10 60011888 60013295 - 116911473 MODEL JAAIVD010000005 pseudo 626129304 LOC116902801 vomeronasal type-1 receptor 90-like 6 83654693 83655586 - 22301074;30032202 116902801 MODEL JAAIVD010000024;XM_032905137 XP_032761028 protein-coding 626129307 LOC116890090 40S ribosomal protein S15-like 1 7670828 7721283 + 116890090 MODEL JAAIVD010000025 pseudo 626129308 Ckap2 cytoskeleton associated protein 2 INVOLVED IN mitotic cytokinesis (ortholog); negative regulation of microtubule depolymerization (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 13 64253645 64273672 + 30032202 116914816 MODEL JAAIVD010000008;XM_032919273 XP_032775164 cytoskeleton-associated protein 2 protein-coding 626129321 Arhgef10 Rho guanine nucleotide exchange factor 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); kinesin binding (ortholog); INVOLVED IN centrosome duplication (ortholog); mitotic spindle assembly (ortholog); myelination in peripheral nervous system (ortholog); ASSOCIATED WITH alcohol-related birth defects (ortholog); autism spectrum disorder (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN centrosome (ortholog) 13 68824679 68914462 - 22301074;30032202 116914588 MODEL JAAIVD010000008;XM_032918949;XM_032918950 XP_032774840;XP_032774841 protein-coding 626129357 LOC116909370 olfactory receptor 1500-like 9 44548014 44548952 - 22301074;30032202 116909370 MODEL JAAIVD010000002;XM_032912920 XP_032768811 protein-coding 626129360 LOC116898735 fibroblast growth factor 12-like 4 11693524 11768400 + 22301074;30032202 116898735 MODEL JAAIVD010000003;XM_032900043;XM_032900044;XM_032900045 XP_032755934;XP_032755935;XP_032755936 protein-coding 626129374 LOC116908446 U4 spliceosomal RNA 8 72306638 72306785 + 116908446 MODEL JAAIVD010000027;XR_004388969 snrna 626129377 Fam20a FAM20A golgi associated secretory pathway pseudokinase ENCODES a protein that exhibits protein serine/threonine kinase activator activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); calcium ion homeostasis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta type 1G (ortholog); genetic disease (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 9 69423017 69474079 + 30032202 116910188 MODEL JAAIVD010000002;XM_032914053 XP_032769944 pseudokinase FAM20A protein-coding 626129392 LOC116904804 U4 spliceosomal RNA 6 133803121 133803282 + 116904804 MODEL JAAIVD010000024 pseudo 626129393 Klhl25 kelch like family member 25 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN fatty acid biosynthetic process (ortholog); negative regulation of fatty acid biosynthetic process (ortholog); positive regulation of CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 2 124689506 124713638 - 22301074 116891962 MODEL JAAIVD010000001;XM_032893405 XP_032749296 kelch-like protein 25 protein-coding 626129400 LOC116897393 U6 spliceosomal RNA 3 18127168 18127274 - 116897393 MODEL JAAIVD010000012;XR_004387437 snrna 626129403 LOC116886386 zinc finger protein 120-like 1 215551873 215553849 - 116886386 MODEL JAAIVD010000025 pseudo 626129404 Mtpap mitochondrial poly(A) polymerase ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN histone mRNA catabolic process (ortholog); mitochondrial mRNA polyadenylation (ortholog); mitochondrial RNA 3'-end processing (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); melanoma (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 14 30769235 30789350 + 30032202 116883508 MODEL JAAIVD010000009;XM_032884678;XM_032884679;XM_032884680;XM_032884681 XP_032740569;XP_032740570;XP_032740571;XP_032740572 poly(A) RNA polymerase, mitochondrial protein-coding 626129426 LOC116900455 olfactory receptor 4C6-like 5 71115199 71116116 - 22301074 116900455 MODEL JAAIVD010000023;XM_032902195 XP_032758086 protein-coding 626129429 Otx1 orthodenticle homeobox 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); diencephalon morphogenesis (ortholog); forebrain development (ortholog) 11 94764660 94771555 + 22301074;30032202 116912262 MODEL JAAIVD010000006;XM_032916250 XP_032772141 homeobox protein OTX1 protein-coding 626129438 LOC116904421 protein SOGA3-like 6 108388634 108424176 + 116904421 MODEL JAAIVD010000024;XM_032907261 XP_032763152 protein-coding 626129445 Tmem115 transmembrane protein 115 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi cisterna membrane (ortholog); Golgi transport complex (ortholog) 8 98850142 98854828 + 22301074;30032202 116907523 MODEL JAAIVD010000027;XM_032910533 XP_032766424 protein-coding 626129451 Lsm7 LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH leukodystrophy (ortholog); Leukodystrophy and cerebellar atrophy (ortholog); FOUND IN Lsm2-8 complex (ortholog); nucleus (ortholog); spliceosomal complex (ortholog) 1 154030725 154033146 + 22301074;30032202 116904754 MODEL JAAIVD010000025;XM_032907444;XM_032907445;XM_032907447 XP_032763335;XP_032763336;XP_032763338 U6 snRNA-associated Sm-like protein LSm7 protein-coding 626129467 LOC116914594 uncharacterized LOC116914594 13 73114835 73143991 + 116914594 MODEL JAAIVD010000008 pseudo 626129468 Ninl ninein like ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN centrosome (ortholog) 5 130634231 130700291 - 22301074;30032202 116902100 MODEL JAAIVD010000023;XM_032904403 XP_032760294 ninein-like protein protein-coding 626129496 Sphk2 sphingosine kinase 2 ENCODES a protein that exhibits histone binding (ortholog); obsolete D-erythro-sphingosine kinase activity (ortholog); sphingosine kinase activity (ortholog); INVOLVED IN blood vessel development (ortholog); brain development (ortholog); cellular response to phorbol 13-acetate 12-myristate (ortholog); PARTICIPATES IN ceramide signaling pathway; Fabry disease pathway; Gaucher's disease pathway; ASSOCIATED WITH Memory Disorders (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 2 153803260 153810895 + 30032202 116892125 MODEL JAAIVD010000001;XM_032893608;XM_032893609;XM_032893610;XM_032893611 XP_032749499;XP_032749500;XP_032749501;XP_032749502 protein-coding 626129514 Stk32a serine/threonine kinase 32A ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog) 15 1685951 1794892 - 22301074;30032202 116884746 MODEL JAAIVD010000010;XM_032885965 XP_032741856 serine/threonine-protein kinase 32A protein-coding 626129530 Aptx aprataxin ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); DNA 5'-adenosine monophosphate hydrolase activity (ortholog); INVOLVED IN regulation of protein stability (ortholog); single strand break repair (ortholog); PARTICIPATES IN non-homologous end joining pathway of double-strand break repair; ASSOCIATED WITH ataxia with oculomotor apraxia type 1 (ortholog); coenzyme Q10 deficiency disease (ortholog); epilepsy (ortholog); FOUND IN chromatin (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 117531016 117554843 + 22301074;30032202 116902617 MODEL JAAIVD010000025;XM_032905035;XM_032905036 XP_032760926;XP_032760927 protein-coding 626129546 Rfxap regulatory factor X associated protein ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH MHC class II deficiency (ortholog); MHC CLASS II DEFICIENCY 1 (ortholog); MHC CLASS II DEFICIENCY 4 (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 99596035 99600278 + 30032202 116896867 MODEL JAAIVD010000012;XM_032898396 XP_032754287 regulatory factor X-associated protein protein-coding 626129553 Il13ra1 interleukin 13 receptor subunit alpha 1 ENCODES a protein that exhibits interleukin-13 receptor activity (ortholog); INVOLVED IN positive regulation of B cell proliferation (ortholog); positive regulation of immunoglobulin production (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH atopic dermatitis (ortholog); bronchiolitis obliterans (ortholog); chronic obstructive pulmonary disease (ortholog) X 102299613 102357532 + 22301074;30032202 116888722 MODEL JAAIVD010000014;XM_032890013 XP_032745904 interleukin-13 receptor subunit alpha-1 protein-coding 626129568 LOC116913855 40S ribosomal protein S20-like 12 83349948 83350293 - 116913855 MODEL JAAIVD010000007 pseudo 626129569 LOC116897638 U2 spliceosomal RNA 3 60659516 60659706 + 116897638 MODEL JAAIVD010000012;XR_004387617 snrna 626129572 Abcb7 ATP binding cassette subfamily B member 7 ENCODES a protein that exhibits ABC-type iron-sulfur cluster transporter activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN intracellular iron ion homeostasis (ortholog); iron ion transmembrane transport (ortholog); iron-sulfur cluster assembly (ortholog); PARTICIPATES IN mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH Ataxia (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) X 66838209 66984016 - 22301074;30032202 116888500 MODEL JAAIVD010000014;XM_032889792 XP_032745683 ATP-binding cassette sub-family B member 7, mitochondrial protein-coding 626129592 Sf3b6 splicing factor 3b subunit 6 ENCODES a protein that exhibits mRNA binding (ortholog); INVOLVED IN blastocyst formation (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 7 25461048 25469780 + 30032202 116906287 MODEL JAAIVD010000026;XM_032909178 XP_032765069 protein-coding 626129600 LOC116899921 5S ribosomal RNA 4 175195161 175195274 - 116899921 MODEL JAAIVD010000003;XR_004387892 rrna 626129603 LOC116886057 uncharacterized LOC116886057 17 29390425 29391320 - 116886057 MODEL JAAIVD010000011;XR_004386088 ncrna 626129607 LOC116883406 60 kDa heat shock protein, mitochondrial-like 14 33571436 33573266 - 116883406 MODEL JAAIVD010000009 pseudo 626129608 Klhl29 kelch like family member 29 7 25708544 26015195 - 22301074 116906291 MODEL JAAIVD010000026;XM_032909187 XP_032765078 kelch-like protein 29 protein-coding 626129626 Adamts4 ADAM metallopeptidase with thrombospondin type 1 motif 4 ENCODES a protein that exhibits metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN defense response to bacterium (ortholog); proteoglycan catabolic process (ortholog); proteolysis (ortholog); ASSOCIATED WITH degenerative disc disease (ortholog); osteoarthritis (ortholog); rheumatoid arthritis (ortholog); FOUND IN extracellular space (ortholog); nuclear speck (ortholog) 10 50414085 50423376 + 22301074;30032202 116911015 MODEL JAAIVD010000005;XM_032914747 XP_032770638 A disintegrin and metalloproteinase with thrombospondin motifs 4 protein-coding 626129638 LOC116908365 small nucleolar RNA SNORA41 8 39601365 39601496 - 116908365 MODEL JAAIVD010000027;XR_004388915 snorna 626129641 LOC116885392 oncomodulin 16 9156655 9162791 + 22301074;30032202 116885392 MODEL JAAIVD010000004;XM_032886672 XP_032742563 protein-coding 626129648 Rap2c RAP2C, member of RAS oncogene family ENCODES a protein that exhibits GDP binding (ortholog); GTP binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); negative regulation of cell migration (ortholog); Rap protein signal transduction (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell contact zone (ortholog); cytoplasm (ortholog) X 114830402 114844073 + 22301074;30032202 116888456 MODEL JAAIVD010000014;XM_032889736 XP_032745627 ras-related protein Rap-2c protein-coding 626129655 Wdtc1 WD and tetratricopeptide repeats 1 ENCODES a protein that exhibits enzyme inhibitor activity (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); glucose metabolic process (ortholog); in utero embryonic development (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 1 24912844 24960881 + 22301074;30032202 116895231 MODEL JAAIVD010000025;XM_032896558 XP_032752449 WD and tetratricopeptide repeats protein 1 protein-coding 626129675 LOC116889267 40S ribosomal protein S12-like X 6438125 6438499 + 116889267 MODEL JAAIVD010000014 pseudo 626129676 LOC116891662 N-lysine methyltransferase KMT5A-like 2 91044128 91046364 + 116891662 MODEL JAAIVD010000001 pseudo 626129677 LOC116888761 14-3-3 protein zeta/delta-like X 93474330 93475175 + 116888761 MODEL JAAIVD010000014 pseudo 626129678 Npy2r neuropeptide Y receptor Y2 ENCODES a protein that exhibits neuropeptide Y receptor activity (ortholog); peptide YY receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); behavioral fear response (ortholog); behavioral response to nicotine (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN cilium (ortholog); non-motile cilium (ortholog) 3 70981528 70990377 + 22301074 116896748 MODEL JAAIVD010000012;XM_032898191 XP_032754082 neuropeptide Y receptor type 2 protein-coding 626129684 Pof1b POF1B actin binding protein ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); bicellular tight junction assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); primary ovarian insufficiency (ortholog); primary ovarian insufficiency 2B (ortholog); FOUND IN actin filament (ortholog); adherens junction (ortholog); bicellular tight junction (ortholog) X 69237772 69301700 + 30032202 116888731 MODEL JAAIVD010000014;XM_032890022 XP_032745913 protein POF1B protein-coding 626129705 LOC116890565 small nucleolar RNA SNORA17 1 129613502 129613638 + 116890565 MODEL JAAIVD010000025;XR_004386735 snorna 626129708 LOC116895292 uncharacterized LOC116895292 3 14941165 14942135 + 116895292 MODEL JAAIVD010000012;XR_004387269 ncrna 626129712 Tppp3 tubulin polymerization promoting protein family member 3 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN decidualization (ortholog); embryo implantation (ortholog); microtubule bundle formation (ortholog); FOUND IN microtubule bundle (ortholog); perinuclear region of cytoplasm (ortholog) 17 25196246 25199981 - 22301074;30032202 116886503 MODEL JAAIVD010000011;XM_032888009;XM_032888010 XP_032743900;XP_032743901 tubulin polymerization-promoting protein family member 3 protein-coding 626129723 LOC116886674 liver carboxylesterase 4 17 14900034 14925241 + 30032202 116886674 MODEL JAAIVD010000011;XM_032888166 XP_032744057 protein-coding 626129741 LOC116898266 uncharacterized LOC116898266 4 163399631 163401528 - 116898266 MODEL JAAIVD010000003;XR_004387647 ncrna 626129746 Iqcc IQ motif containing C ASSOCIATED WITH polycystic ovary syndrome (ortholog) 1 28530336 28534576 + 22301074 116896068 MODEL JAAIVD010000025;XM_032897055 XP_032752946 IQ domain-containing protein C protein-coding 626129755 Slc2a4 solute carrier family 2 member 4 ENCODES a protein that exhibits D-glucose transmembrane transporter activity (ortholog); D-glucose uniporter activity (ortholog); INVOLVED IN amylopectin biosynthetic process (ortholog); brown fat cell differentiation (ortholog); cellular response to hypoxia (ortholog); PARTICIPATES IN facilitative sugar transporter mediated glucose transport pathway; insulin responsive facilitative sugar transporter mediated glucose transport pathway; insulin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cell surface (ortholog); clathrin-coated pit (ortholog); clathrin-coated vesicle (ortholog) 9 49550598 49556233 - 22301074;30032202 116909379 MODEL JAAIVD010000002;XM_032912932;XM_032912933 XP_032768823;XP_032768824 solute carrier family 2, facilitated glucose transporter member 4 protein-coding 626129773 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42468662 42468733 + 116884233 MODEL JAAIVD010000009 trna 626129774 Smad6 SMAD family member 6 ENCODES a protein that exhibits chromatin binding (ortholog); co-SMAD binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN aorta development (ortholog); aortic valve morphogenesis (ortholog); BMP signaling pathway (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; ASSOCIATED WITH aortic disease (ortholog); aortic valve disease 1 (ortholog); aortic valve disease 2 (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); cytoplasm (ortholog) 8 58258431 58327647 - 22301074;30032202 116907439 MODEL JAAIVD010000027;XM_032910409;XM_032910410 XP_032766300;XP_032766301 mothers against decapentaplegic homolog 6 protein-coding 626129786 Efcab6 EF-hand calcium binding domain 6 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH Asthenozoospermia (ortholog); prostate cancer (ortholog); Teratozoospermia (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); nucleoplasm (ortholog); sperm flagellum (ortholog) 1 253279125 253461132 - 22301074;30032202 116914478 MODEL JAAIVD010000025;XM_032918784 XP_032774675 EF-hand calcium-binding domain-containing protein 6 protein-coding 626129822 LOC116885438 uncharacterized LOC116885438 16 30523177 30529596 + 116885438 MODEL JAAIVD010000004;XR_004386008 ncrna 626129827 Hcrtr2 hypocretin receptor 2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); orexin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN feeding behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); locomotion (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; orexin/hypocretin signaling pathway; ASSOCIATED WITH hyperglycemia (ortholog); narcolepsy (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 8 70490419 70591442 - 22301074;30032202 116907722 MODEL JAAIVD010000027;XM_032910850 XP_032766741 orexin receptor type 2 protein-coding 626129839 LOC116910102 dynein light chain 1, cytoplasmic-like 9 111015 111491 + 22301074;30032202 116910102 MODEL JAAIVD010000002;XM_032913929 XP_032769820 protein-coding 626129843 Nms neuromedin S ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); INVOLVED IN locomotor rhythm (ortholog); neuropeptide signaling pathway (ortholog) 4 115139414 115150288 + 116898144 MODEL JAAIVD010000003;XM_032899522 XP_032755413 neuromedin-S protein-coding 626129857 Plekhf2 pleckstrin homology and FYVE domain containing 2 FOUND IN transport vesicle (ortholog) 1 132703466 132720096 + 22301074;30032202 116903464 MODEL JAAIVD010000025;XM_032906019;XM_032906027 XP_032761910;XP_032761918 pleckstrin homology domain-containing family F member 2 protein-coding 626129865 Atp23 ATP23 metallopeptidase and ATP synthase assembly factor homolog FOUND IN cell junction (ortholog); cytosol (ortholog); mitochondrion (ortholog) 1 205322117 205337176 - 22301074;30032202 116909721 MODEL JAAIVD010000025;XM_032913396;XM_032913404;XM_032913411 XP_032769287;XP_032769295;XP_032769302 mitochondrial inner membrane protease ATP23 homolog protein-coding 626129881 LOC116893265 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143622542 143623451 - 116893265 MODEL JAAIVD010000001 pseudo 626129882 Xylb xylulokinase ENCODES a protein that exhibits D-xylulokinase activity (ortholog); INVOLVED IN xylulose metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog) 8 110593154 110625343 + 22301074;30032202 116907913 MODEL JAAIVD010000027;XM_032911113 XP_032767004 xylulose kinase protein-coding 626129905 LOC116906542 prostate and testis expressed protein 4-like 8 31298955 31300323 - 116906542 MODEL JAAIVD010000027;XM_032909240 XP_032765131 protein-coding 626129912 KEG97_t20 tRNA-Glu MT 14053 14121 - 64988257 trna 626129913 Ttc39a tetratricopeptide repeat domain 39A ASSOCIATED WITH Liver Neoplasms (ortholog); Wolff-Parkinson-White syndrome (ortholog); FOUND IN centrosome (ortholog) 1 45416169 45454205 - 22301074 116898961 MODEL JAAIVD010000025;XM_032900385 XP_032756276 tetratricopeptide repeat protein 39A protein-coding 626129935 LOC116888410 uncharacterized LOC116888410 X 88498878 88504218 + 116888410 MODEL JAAIVD010000014;XR_004386309 ncrna 626129940 Eva1c eva-1 homolog C ENCODES a protein that exhibits heparin binding (ortholog); FOUND IN extracellular region (ortholog) 4 53677634 53750968 - 22301074;30032202 116899006 MODEL JAAIVD010000003;XM_032900452;XM_032900453;XM_032900454 XP_032756343;XP_032756344;XP_032756345 protein eva-1 homolog C protein-coding 626129957 LOC116887261 olfactory receptor 14J1-like 18 10553423 10561489 + 116887261 MODEL JAAIVD010000013 pseudo 626129958 LOC116906335 U6 spliceosomal RNA 7 13036797 13036893 - 116906335 MODEL JAAIVD010000026 pseudo 626129959 Dennd5a DENN domain containing 5A ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN negative regulation of neuron projection development (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 49 (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); retromer complex (ortholog); trans-Golgi network (ortholog) 2 91506696 91574332 + 30032202 116891669 MODEL JAAIVD010000001;XM_032892923 XP_032748814 DENN domain-containing protein 5A protein-coding 626129985 LOC116895323 histidine triad nucleotide-binding protein 1-like 3 32964741 32965233 - 30032202 116895323 MODEL JAAIVD010000012;XM_032896632 XP_032752523 protein-coding 626129989 LOC116892027 uncharacterized LOC116892027 2 139538700 139549563 - 116892027 MODEL JAAIVD010000001;XR_004386900 ncrna 626129994 Ptprcap protein tyrosine phosphatase receptor type C associated protein FOUND IN plasma membrane (ortholog) 2 3485645 3487828 - 30032202 116890783 MODEL JAAIVD010000001;XM_032891253 XP_032747144 protein tyrosine phosphatase receptor type C-associated protein protein-coding 626130000 Nynrin NYN domain and retroviral integrase containing ASSOCIATED WITH hepatoblastoma (ortholog); nephroblastoma (ortholog); Perlman syndrome (ortholog) 12 69146598 69169370 - 22301074;30032202 116913621 MODEL JAAIVD010000007;XM_032917880 XP_032773771 protein NYNRIN protein-coding 626130013 Sycp2l synaptonemal complex protein 2 like INVOLVED IN negative regulation of programmed cell death (ortholog); ASSOCIATED WITH PREMATURE OVARIAN FAILURE 24 (ortholog); FOUND IN condensed chromosome, centromeric region (ortholog); female germ cell nucleus (ortholog); lateral element (ortholog) 14 60109857 60162851 + 116883236 MODEL JAAIVD010000009;XM_032884244 XP_032740135 synaptonemal complex protein 2-like protein-coding 626130046 LOC116888860 60S ribosomal protein L5-like X 41643222 41644163 + 116888860 MODEL JAAIVD010000014 pseudo 626130047 Gfer growth factor, augmenter of liver regeneration ENCODES a protein that exhibits flavin adenine dinucleotide binding (ortholog); flavin-dependent sulfhydryl oxidase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN cellular response to actinomycin D (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to toxic substance (ortholog); PARTICIPATES IN intermembrane space assembly pathway of mitochondrial protein import; mitochondrial iron-sulfur cluster export pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Liver Failure (ortholog); Acute-On-Chronic Liver Failure (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); mitochondrion (ortholog) 9 1976845 1979252 - 30032202 116909061 MODEL JAAIVD010000002;XM_032912539 XP_032768430 FAD-linked sulfhydryl oxidase ALR protein-coding 626130054 LOC116912929 U6 spliceosomal RNA 11 32318838 32318942 - 116912929 MODEL JAAIVD010000006;XR_004389500 snrna 626130057 Cacng7 calcium voltage-gated channel auxiliary subunit gamma 7 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); positive regulation of dendrite extension (ortholog); regulation of AMPA receptor activity (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); cerebellar mossy fiber (ortholog); early endosome (ortholog) 2 177975088 178004714 + 22301074;30032202 116892694 MODEL JAAIVD010000001;XM_032894551 XP_032750442 voltage-dependent calcium channel gamma-7 subunit protein-coding 626130067 LOC116914290 elongin-A-like 13 34009478 34012044 - 116914290 MODEL JAAIVD010000008 pseudo 626130068 Rtn3 reticulon 3 INVOLVED IN endoplasmic reticulum tubular network formation (ortholog); endoplasmic reticulum tubular network organization (ortholog); negative regulation of amyloid-beta formation (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); glutamatergic synapse (ortholog) 2 301907 358459 + 30032202 116894790 MODEL JAAIVD010000001;XM_032896440;XM_032896441;XM_032896442;XM_032896443 XP_032752331;XP_032752332;XP_032752333;XP_032752334 reticulon-3 protein-coding 626130091 Drd5 dopamine receptor D5 ENCODES a protein that exhibits dopamine binding (ortholog); dopamine neurotransmitter receptor activity (ortholog); dopamine neurotransmitter receptor activity, coupled via Gs (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); associative learning (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D1 family of receptors; G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Alzheimer's disease (ortholog); Benign Essential Blepharospasm (ortholog); bipolar disorder (ortholog); FOUND IN axon (ortholog); brush border membrane (ortholog); ciliary membrane (ortholog) 11 66870910 66872368 - 22301074;30032202 116912788 MODEL JAAIVD010000006;XM_032916950 XP_032772841 D(1B) dopamine receptor protein-coding 626130095 Arl15 ARF like GTPase 15 3 182548427 182919095 - 22301074 116897182 MODEL JAAIVD010000012;XM_032898868;XM_032898869 XP_032754759;XP_032754760 ADP ribosylation factor like GTPase 15;ADP-ribosylation factor-like protein 15 protein-coding 626130107 LOC116885613 uncharacterized LOC116885613 16 39142875 39147785 + 116885613 MODEL JAAIVD010000004;XR_004386026 ncrna 626130111 Zbtb9 zinc finger and BTB domain containing 9 ENCODES a protein that exhibits identical protein binding (ortholog) 18 6829115 6832109 - 22301074;30032202 116887268 MODEL JAAIVD010000013;XM_032888835;XM_032888836;XM_032888838 XP_032744726;XP_032744727;XP_032744729 zinc finger and BTB domain-containing protein 9 protein-coding 626130122 LOC116900253 olfactory receptor 9G4-like 5 63098845 63099786 + 22301074;30032202 116900253 MODEL JAAIVD010000023;XM_032902005 XP_032757896 protein-coding 626130126 Erich6 glutamate rich 6 FOUND IN nucleus (ortholog) 3 97126690 97153175 - 116896854 MODEL JAAIVD010000012;XM_032898364 XP_032754255 glutamate-rich protein 6 protein-coding 626130144 Tekt2 tektin 2 INVOLVED IN flagellated sperm motility (ortholog); inner dynein arm assembly (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); microtubule organizing center (ortholog) 1 31963508 31967094 + 22301074;30032202 116896636 MODEL JAAIVD010000025;XM_032897956 XP_032753847 tektin-2 protein-coding 626130158 LOC116910966 dipeptidyl peptidase 3-like 10 85550721 85552273 - 116910966 MODEL JAAIVD010000005 pseudo 626130159 LOC116902085 zinc finger protein 120 5 129830344 129850174 - 22301074 116902085 MODEL JAAIVD010000023;XM_032904383;XM_032904384;XR_004388040 XP_032760274;XP_032760275 protein-coding 626130174 LOC116906343 small nucleolar RNA SNORA73 family 7 59493267 59493470 + 116906343 MODEL JAAIVD010000026;XR_004388623 snorna 626130177 Ccl21 C-C motif chemokine ligand 21 ENCODES a protein that exhibits CCR7 chemokine receptor binding (ortholog); chemokine activity (ortholog); chemokine receptor binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); CCL21-activated CCR7 signaling pathway (ortholog); cell chemotaxis (ortholog); ASSOCIATED WITH Cytomegalovirus Infections (ortholog); pulmonary fibrosis (ortholog); rheumatoid arthritis (ortholog) 1 3744532 3745656 + 22301074;30032202 116885945 MODEL JAAIVD010000025;XM_032887267 XP_032743158 C-C motif chemokine 21 protein-coding 626130185 LOC116884427 uncharacterized LOC116884427 15 12455087 12463519 + 116884427 MODEL JAAIVD010000010;XR_004385868 ncrna 626130189 Slc5a5 solute carrier family 5 member 5 ENCODES a protein that exhibits iodide transmembrane transporter activity (ortholog); monoatomic anion:sodium symporter activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to cAMP (ortholog); cellular response to forskolin (ortholog); cellular response to gonadotropin stimulus (ortholog); PARTICIPATES IN thyroid hormone biosynthetic pathway; ASSOCIATED WITH amenorrhea (ortholog); Breast Neoplasms (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); plasma membrane (ortholog) 13 13128659 13137502 - 22301074;30032202 116914527 MODEL JAAIVD010000008;XM_032918858 XP_032774749 sodium/iodide cotransporter protein-coding 626130207 LOC116906321 U6 spliceosomal RNA 7 50760701 50760805 - 116906321 MODEL JAAIVD010000026;XR_004388608 snrna 626130210 Ankrd7 ankyrin repeat domain 7 INVOLVED IN blastocyst hatching (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 120656267 120667511 + 22301074 116902939 MODEL JAAIVD010000024;XM_032905263;XM_032905264 XP_032761154;XP_032761155 ankyrin repeat domain-containing protein 7 protein-coding 626130221 Etnppl ethanolamine-phosphate phospho-lyase ENCODES a protein that exhibits ethanolamine-phosphate phospho-lyase activity (ortholog); INVOLVED IN cellular response to glucocorticoid stimulus (ortholog); ceramide phosphoethanolamine catabolic process (ortholog); lipid homeostasis (ortholog) 3 28684336 28703863 - 22301074;30032202 116896256 MODEL JAAIVD010000012;XM_032897331 XP_032753222 protein-coding 626130238 Abcd3 ATP binding cassette subfamily D member 3 ENCODES a protein that exhibits ATP binding (ortholog); ATP hydrolysis activity (ortholog); ATPase-coupled transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bile acid biosynthetic process (ortholog); fatty acid beta-oxidation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital bile acid synthesis defect 5 (ortholog); Zellweger syndrome (ortholog); FOUND IN mitochondrion (ortholog); peroxisomal matrix (ortholog); peroxisomal membrane (ortholog) 3 38051431 38105989 + 22301074;30032202 116896306 MODEL JAAIVD010000012;XM_032897392;XM_032897393 XP_032753283;XP_032753284 ATP-binding cassette sub-family D member 3 protein-coding 626130268 LOC116900012 vomeronasal secretory protein 2-like 5 10326745 10329663 - 30032202 116900012 MODEL JAAIVD010000023;XM_032901813 XP_032757704 protein-coding 626130275 Prg2 proteoglycan 2, pro eosinophil major basic protein INVOLVED IN defense response to nematode (ortholog); negative regulation of interleukin-10 production (ortholog); negative regulation of macrophage cytokine production (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); Chagas disease (ortholog) 5 62348493 62351507 + 22301074 116900230 MODEL JAAIVD010000023;XM_032901981 XP_032757872 bone marrow proteoglycan protein-coding 626130285 LOC116907008 60S ribosomal protein L36-like 8 86964448 86964828 + 22301074;30032202 116907008 MODEL JAAIVD010000027;XM_032909941 XP_032765832 protein-coding 626130290 Defb118 defensin beta 118 ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); membrane destabilizing activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog) 5 131894711 131896040 + 22301074 116900698 MODEL JAAIVD010000023;XM_032902400 XP_032758291 beta-defensin 118 protein-coding 626130296 Rbms3 RNA binding motif single stranded interacting protein 3 ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); poly(A) binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH exfoliation syndrome (ortholog); FOUND IN cytoplasm (ortholog) 8 107870509 108535612 - 22301074;30032202 116907879 MODEL JAAIVD010000027;XM_032911065;XM_032911066;XM_032911067;XM_032911068;XM_032911069 XP_032766956;XP_032766957;XP_032766958;XP_032766959;XP_032766960 RNA-binding motif, single-stranded-interacting protein 3 protein-coding 626130319 Rsad1 radical S-adenosyl methionine domain containing 1 ENCODES a protein that exhibits heme binding (ortholog); FOUND IN mitochondrion (ortholog) 9 50991335 50998563 + 22301074;30032202 116909675 MODEL JAAIVD010000002;XM_032913331;XM_032913332 XP_032769222;XP_032769223 radical S-adenosyl methionine domain-containing protein 1, mitochondrial protein-coding 626130336 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 134419927 134419999 - 116897700 MODEL JAAIVD010000012 trna 626130337 Cct6a chaperonin containing TCP1 subunit 6A ENCODES a protein that exhibits protein folding chaperone (ortholog); WD40-repeat domain binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); positive regulation of establishment of protein localization to telomere (ortholog); positive regulation of protein localization to Cajal body (ortholog); FOUND IN acrosomal vesicle (ortholog); cell body (ortholog); chaperonin-containing T-complex (ortholog) 16 24173996 24184231 - 22301074;30032202 116885232 MODEL JAAIVD010000004;XM_032886469 XP_032742360 T-complex protein 1 subunit zeta protein-coding 626130355 LOC116884188 proton myo-inositol cotransporter-like 1 264497405 264574356 - 22301074;30032202 116884188 MODEL JAAIVD010000025;XM_032885324 XP_032741215 protein-coding 626130362 LOC116889850 40S ribosomal protein S6-like 1 152614257 152614965 - 116889850 MODEL JAAIVD010000025 pseudo 626130363 Arf3 ARF GTPase 3 INVOLVED IN retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum (ortholog); ASSOCIATED WITH autistic disorder (ortholog); congenital heart disease (ortholog); Developmental Disabilities (ortholog); FOUND IN Golgi apparatus (ortholog) 1 271545696 271585301 - 22301074;30032202 116884831 MODEL JAAIVD010000025;XM_032886073;XM_032886078 XP_032741964;XP_032741969 ADP ribosylation factor 3;ADP-ribosylation factor 3 protein-coding 626130379 LOC116909515 uncharacterized LOC116909515 9 87438171 87439122 - 116909515 MODEL JAAIVD010000002;XR_004389078 ncrna 626130383 LOC116898323 SUMO-conjugating enzyme UBC9-B-like 4 41041608 41062062 + 116898323 MODEL JAAIVD010000003 pseudo 626130384 B3gnt8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8 ENCODES a protein that exhibits protein N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) 2 169164610 169166331 - 22301074;30032202 116894477 MODEL JAAIVD010000001;XM_032896187 XP_032752078 protein-coding 626130390 Slc30a10 solute carrier family 30 member 10 ENCODES a protein that exhibits calcium:manganese antiporter activity (ortholog); manganese ion transmembrane transporter activity (ortholog); zinc ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to angiotensin (ortholog); epidermal growth factor receptor signaling pathway (ortholog); intracellular copper ion homeostasis (ortholog); ASSOCIATED WITH cholestasis (ortholog); dystonia (ortholog); genetic disease (ortholog); FOUND IN early endosome (ortholog); early endosome membrane (ortholog); Golgi apparatus (ortholog) 10 63586672 63619722 + 22301074;30032202 116911026 MODEL JAAIVD010000005;XM_032914761;XM_032914762 XP_032770652;XP_032770653 zinc transporter 10 protein-coding 626130401 KEG97_t18 tRNA-Ser MT 11598 11656 + 64988246 trna 626130402 Neu1 neuraminidase 1 ENCODES a protein that exhibits alpha-sialidase activity (ortholog); exo-alpha-sialidase activity (ortholog); INVOLVED IN oligosaccharide catabolic process (ortholog); positive regulation of neuron projection development (ortholog); regulation of myoblast proliferation (ortholog); ASSOCIATED WITH genetic disease (ortholog); glycoproteinosis (ortholog); Hydrops Fetalis (ortholog); FOUND IN cell junction (ortholog); cell surface (ortholog); lysosome (ortholog) 18 7523007 7527201 + 30032202 116887036 MODEL JAAIVD010000013;XM_032888527 XP_032744418 sialidase-1 protein-coding 626130412 Pls1 plastin 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); intestinal D-glucose absorption (ortholog); microvillus assembly (ortholog); PARTICIPATES IN auditory mechanotransduction pathway; ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 76 (ortholog); genetic disease (ortholog); FOUND IN brush border (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 87208916 87301542 - 22301074;30032202 116907033 MODEL JAAIVD010000027;XM_032909980 XP_032765871 plastin-1 protein-coding 626130432 Zan zonadhesin ENCODES a protein that exhibits extracellular matrix binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); regulation of binding of sperm to zona pellucida (ortholog); FOUND IN plasma membrane (ortholog) 16 16541499 16650046 + 22301074 116885198 MODEL JAAIVD010000004;XM_032886423 XP_032742314 protein-coding 626130525 LOC116913078 60S ribosomal protein L29-like 12 21101134 21101609 + 116913078 MODEL JAAIVD010000007 pseudo 626130526 LOC116897594 small nucleolar RNA SNORA17 3 90830157 90830286 + 116897594 MODEL JAAIVD010000012;XR_004387596 snorna 626130529 LOC116887372 60S ribosomal protein L6-like 1 221260711 221271290 + 116887372 MODEL JAAIVD010000025 pseudo 626130530 Txndc9 thioredoxin domain containing 9 FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 114176047 114184716 - 30032202 116899307 MODEL JAAIVD010000003;XM_032900967 XP_032756858 thioredoxin domain-containing protein 9 protein-coding 626130538 Pcsk9 proprotein convertase subtilisin/kexin type 9 ENCODES a protein that exhibits apolipoprotein binding (ortholog); apolipoprotein receptor binding (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); cellular response to starvation (ortholog); cholesterol homeostasis (ortholog); ASSOCIATED WITH autosomal recessive hypercholesterolemia (ortholog); coronary artery disease (ortholog); Coronary Disease (ortholog); FOUND IN cell surface (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); cytoplasm (ortholog) 1 48353791 48376045 + 22301074;30032202 116899419 MODEL JAAIVD010000025;XM_032901162 XP_032757053 protein-coding 626130554 Taf6l TATA-box binding protein associated factor 6 like ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); regulation of somatic stem cell population maintenance (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); SAGA complex (ortholog) 2 9156304 9169181 + 22301074;30032202 116890927 MODEL JAAIVD010000001;XM_032891567;XM_032891568;XM_032891570 XP_032747458;XP_032747459;XP_032747461 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L protein-coding 626130574 Coro1c coronin 1C ENCODES a protein that exhibits actin filament binding (ortholog); small GTPase binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); corpus callosum development (ortholog); endosomal transport (ortholog); ASSOCIATED WITH IgA glomerulonephritis (ortholog); lung non-small cell carcinoma (ortholog); proliferative diabetic retinopathy (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoskeleton (ortholog); endosome membrane (ortholog) 16 40056588 40128192 + 30032202 116885221 MODEL JAAIVD010000004;XM_032886457 XP_032742348 coronin-1C protein-coding 626130589 LOC116905730 peptidyl-prolyl cis-trans isomerase A-like 7 78501838 78502340 + 116905730 MODEL JAAIVD010000026 pseudo 626130590 Card6 caspase recruitment domain family member 6 ASSOCIATED WITH COVID-19 (ortholog) 3 175214164 175225563 + 22301074 116897154 MODEL JAAIVD010000012;XM_032898824 XP_032754715 caspase recruitment domain-containing protein 6 protein-coding 626130597 LOC116904418 acyl carrier protein, mitochondrial-like 6 105429403 105429880 + 116904418 MODEL JAAIVD010000024 pseudo 626130598 Ikbke inhibitor of nuclear factor kappa B kinase subunit epsilon ENCODES a protein that exhibits identical protein binding (ortholog); IkappaB kinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to virus (ortholog); gene expression (ortholog); immune response (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial membrane (ortholog); nucleus (ortholog) 10 4536040 4558348 + 22301074;30032202 116911230 MODEL JAAIVD010000005;XM_032915130 XP_032771021 inhibitor of nuclear factor kappa-B kinase subunit epsilon protein-coding 626130622 Ergic3 ERGIC and golgi 3 INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); positive regulation of intracellular protein transport (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); Experimental Neoplasms (ortholog); lung adenocarcinoma (ortholog); FOUND IN retrograde transporter complex, Golgi to ER (ortholog); transporter complex (ortholog) 5 135369553 135379299 + 30032202 116902193 MODEL JAAIVD010000023;XM_032904557 XP_032760448 endoplasmic reticulum-Golgi intermediate compartment protein 3 protein-coding 626130639 Stxbp4 syntaxin binding protein 4 ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN cellular response to type II interferon (ortholog); DNA damage response (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN phagocytic vesicle (ortholog) 9 80214076 80341424 + 30032202 116910370 MODEL JAAIVD010000002;XM_032914218 XP_032770109 syntaxin-binding protein 4 protein-coding 626130658 LOC116905215 pre-mRNA-splicing factor CWC22 homolog 7 94544066 94546944 - 22301074;30032202 116905215 MODEL JAAIVD010000026;XM_032908031 XP_032763922 protein-coding 626130663 LOC116910692 U1 spliceosomal RNA 9 11163066 11163225 + 116910692 MODEL JAAIVD010000002;XR_004389221 snrna 626130666 LOC116901350 coiled-coil domain-containing protein 85C-like 5 15006816 15008107 - 116901350 MODEL JAAIVD010000023 pseudo 626130667 LOC116894171 olfactory receptor 10A5-like 2 105183530 105184483 + 22301074 116894171 MODEL JAAIVD010000001;XM_032895887 XP_032751778 protein-coding 626130670 Spry4 sprouty RTK signaling antagonist 4 ENCODES a protein that exhibits protein kinase inhibitor activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of substrate adhesion-dependent cell spreading (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); amenorrhea (ortholog); disorder of sexual development (ortholog); FOUND IN cytoplasm (ortholog) 15 6331201 6346048 + 22301074;30032202 116884579 MODEL JAAIVD010000010;XM_032885721 XP_032741612 protein sprouty homolog 4 protein-coding 626130676 Lcn8 lipocalin 8 INVOLVED IN response to hormone (ortholog) 5 11527944 11530928 - 30032202 116900098 MODEL JAAIVD010000023;XM_032901877 XP_032757768 epididymal-specific lipocalin-8 protein-coding 626130687 Eapp E2F associated phosphoprotein INVOLVED IN negative regulation of transcription elongation by RNA polymerase II (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 68053183 68075617 - 30032202 116905050 MODEL JAAIVD010000026;XM_032907736 XP_032763627 E2F-associated phosphoprotein protein-coding 626130697 Slc26a7 solute carrier family 26 member 7 ENCODES a protein that exhibits bicarbonate transmembrane transporter activity (ortholog); chloride channel activity (ortholog); chloride:bicarbonate antiporter activity (ortholog); INVOLVED IN bicarbonate transport (ortholog); chloride transport (ortholog); gastric acid secretion (ortholog); ASSOCIATED WITH congenital hypothyroidism (ortholog); genetic disease (ortholog); Hyperoxaluria (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 1 129129898 129250924 + 22301074;30032202 116902426 MODEL JAAIVD010000025;XM_032904998 XP_032760889 anion exchange transporter protein-coding 626130719 Tnfsf18 TNF superfamily member 18 ENCODES a protein that exhibits identical protein binding (ortholog); tumor necrosis factor receptor superfamily binding (ortholog); INVOLVED IN activated CD4-positive, alpha-beta T cell proliferation (ortholog); negative regulation of T-helper 17 cell lineage commitment (ortholog); positive regulation of cell adhesion (ortholog); FOUND IN cell surface (ortholog) 10 40799325 40807564 + 30032202 116911782 MODEL JAAIVD010000005;XM_032915776;XM_032915778 XP_032771667;XP_032771669 tumor necrosis factor ligand superfamily member 18 protein-coding 626130726 LOC116904582 40S ribosomal protein S2-like 6 20922983 20923665 + 116904582 MODEL JAAIVD010000024 pseudo 626130727 Htr2b 5-hydroxytryptamine receptor 2B ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); G-protein alpha-subunit binding (ortholog); Gq/11-coupled serotonin receptor activity (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); cardiac muscle hypertrophy (ortholog); cellular response to amine stimulus (ortholog); ASSOCIATED WITH brain infarction (ortholog); Cardiomegaly (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); G protein-coupled serotonin receptor complex (ortholog) 4 158234305 158246437 - 22301074;30032202 116899586 MODEL JAAIVD010000003;XM_032901526 XP_032757417 protein-coding 626130734 LOC116907509 fas apoptotic inhibitory molecule 1 8 90329281 90344206 + 30032202 116907509 MODEL JAAIVD010000027;XM_032910507;XM_032910508;XM_032910509;XM_032910511 XP_032766398;XP_032766399;XP_032766400;XP_032766402 protein-coding 626130752 LOC116886673 28S ribosomal protein S36, mitochondrial-like 17 20686400 20686847 - 116886673 MODEL JAAIVD010000011 pseudo 626130753 Dact1 dishevelled binding antagonist of beta catenin 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); delta-catenin binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); dendrite morphogenesis (ortholog); embryonic hindgut morphogenesis (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome (ortholog); Colorectal Neoplasms (ortholog); Townes-Brocks syndrome (ortholog); FOUND IN beta-catenin destruction complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 7 84935819 84946304 + 30032202 116905142 MODEL JAAIVD010000026;XM_032907907;XM_032907908 XP_032763798;XP_032763799 dapper homolog 1 protein-coding 626130762 LOC116892496 zinc finger protein 235-like 2 170521286 170531952 + 30032202 116892496 MODEL JAAIVD010000001;XM_032894240;XM_032894241 XP_032750131;XP_032750132 protein-coding 626130773 Slc39a14 solute carrier family 39 member 14 ENCODES a protein that exhibits cadmium ion transmembrane transporter activity (ortholog); ferrous iron transmembrane transporter activity (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to insulin stimulus (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN iron uptake pathway; ASSOCIATED WITH genetic disease (ortholog); hypermanganesemia with dystonia 2 (ortholog); Hyperostosis Cranialis Interna (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); early endosome membrane (ortholog) 12 53997645 54044196 + 22301074;30032202 116913365 MODEL JAAIVD010000007;XM_032917529;XM_032917530 XP_032773420;XP_032773421 zinc transporter ZIP14 protein-coding 626130789 LOC116889906 olfactory receptor 6C6-like 1 160218310 160219257 - 22301074;30032202 116889906 MODEL JAAIVD010000025;XM_032890726 XP_032746617 protein-coding 626130793 Rbfox1 RNA binding fox-1 homolog 1 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); RNA binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); nuclear stress granule (ortholog) 9 14515133 16036348 - 30032202 116909243 MODEL JAAIVD010000002;XM_032912747;XM_032912748;XM_032912750;XM_032912751;XM_032912752;XM_032912753;XM_032912754;XM_032912755;XM_032912756;XM_032912757;XM_032912758;XM_032912759;XM_032912760;XM_032912761;XM_032912762;XM_032912763;XM_032912764;XM_032912766;XM_032912767;XM_032912768;XM_032912769 XP_032768638;XP_032768639;XP_032768641;XP_032768642;XP_032768643;XP_032768644;XP_032768645;XP_032768646;XP_032768647;XP_032768648;XP_032768649;XP_032768650;XP_032768651;XP_032768652;XP_032768653;XP_032768654;XP_032768655;XP_032768657;XP_032768658;XP_032768659;XP_032768660 RNA binding protein fox-1 homolog 1 protein-coding 626130857 Sema4g semaphorin 4G 2 44496618 44510766 + 30032202 116891216 MODEL JAAIVD010000001;XM_032892050;XR_004386821 XP_032747941 semaphorin-4G protein-coding 626130879 LOC116884250 ATP synthase subunit g, mitochondrial-like 15 33525112 33526948 + 116884250 MODEL JAAIVD010000010 pseudo 626130880 Rp1 RP1 axonemal microtubule associated 1 139516166 139757427 - 22301074;30032202 116889529 MODEL JAAIVD010000025;XM_032890523;XM_032890524 XP_032746414;XP_032746415 oxygen-regulated protein 1 protein-coding 626130910 LOC116900195 28S ribosomal protein S36, mitochondrial-like 5 49018422 49018744 + 22301074;30032202 116900195 MODEL JAAIVD010000023;XM_032901954 XP_032757845 protein-coding 626130914 Dmac2l distal membrane arm assembly component 2 like FOUND IN mitochondrion (ortholog) 7 83390970 83409406 + 116905122 MODEL JAAIVD010000026;XM_032907863;XM_032907864;XM_032907865;XM_032907866 XP_032763754;XP_032763755;XP_032763756;XP_032763757 ATP synthase subunit s, mitochondrial;distal membrane arm assembly complex 2 like protein-coding 626130933 LOC116886888 uncharacterized LOC116886888 18 5597735 5619885 - 116886888 MODEL JAAIVD010000013;XR_004386193 ncrna 626130938 LOC116907322 ralA-binding protein 1-like 8 31108251 31116045 + 116907322 MODEL JAAIVD010000027 pseudo 626130939 Arap1 ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); type 1 angiotensin receptor binding (ortholog); INVOLVED IN negative regulation of stress fiber assembly (ortholog); photoreceptor cell maintenance (ortholog); positive regulation of filopodium assembly (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; platelet-derived growth factor signaling pathway; ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); extrinsic component of plasma membrane (ortholog) 2 99675124 99720763 + 22301074;30032202 116891759 MODEL JAAIVD010000001;XM_032893081 XP_032748972 arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 protein-coding 626130977 LOC116914150 U2 spliceosomal RNA 12 24759865 24760056 + 116914150 MODEL JAAIVD010000007;XR_004389702 snrna 626130980 LOC116900192 glyceraldehyde-3-phosphate dehydrogenase-like 5 48460832 48461742 + 116900192 MODEL JAAIVD010000023 pseudo 626130981 Hoxa9 homeobox A9 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); enzyme binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); definitive hemopoiesis (ortholog); embryonic forelimb morphogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); melanoma (ortholog); Neoplasm Recurrence, Local (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 88833595 88839549 + 22301074;30032202 116903802 MODEL JAAIVD010000024;XM_032906494;XM_032906496;XM_032906497 XP_032762385;XP_032762387;XP_032762388 homeobox protein Hox-A9 protein-coding 626130994 LOC116883264 60S ribosomal protein L24-like 14 76819416 76819932 - 116883264 MODEL JAAIVD010000009 pseudo 626130995 Cep170 centrosomal protein 170 FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog); centrosome (ortholog) 10 55212267 55294000 - 22301074;30032202 116911214 MODEL JAAIVD010000005;XM_032915090;XM_032915091;XM_032915093;XM_032915094;XM_032915095;XM_032915096;XM_032915097;XM_032915098;XM_032915099;XM_032915100;XM_032915101 XP_032770981;XP_032770982;XP_032770984;XP_032770985;XP_032770986;XP_032770987;XP_032770988;XP_032770989;XP_032770990;XP_032770991;XP_032770992 centrosomal protein of 170 kDa protein-coding 626131038 LOC116887396 60S ribosomal protein L13-like 18 7584251 7584873 - 116887396 MODEL JAAIVD010000013 pseudo 626131039 Adck1 aarF domain containing kinase 1 INVOLVED IN negative regulation of mitochondrial fusion (ortholog); positive regulation of cristae formation (ortholog); FOUND IN mitochondrion (ortholog) 7 101704784 101804396 - 22301074;30032202 116905328 MODEL JAAIVD010000026;XM_032908221;XM_032908222;XM_032908224 XP_032764112;XP_032764113;XP_032764115 aarF domain-containing protein kinase 1 protein-coding 626131062 LOC116889463 small nucleolar RNA SNORA70 X 128275737 128275872 + 116889463 MODEL JAAIVD010000014;XR_004386417 snorna 626131065 LOC116897872 stefin-1-like 4 21275940 21283032 - 22301074;30032202 116897872 MODEL JAAIVD010000003;XM_032899280 XP_032755171 protein-coding 626131071 Pigh phosphatidylinositol glycan anchor biosynthesis class H INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH Glycosylphosphatidylinositol Biosynthesis Defect 17 (ortholog); prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex (ortholog) 7 93196036 93203237 - 30032202 116905203 MODEL JAAIVD010000026;XM_032908014 XP_032763905 phosphatidylinositol N-acetylglucosaminyltransferase subunit H protein-coding 626131079 LOC116884339 U6 snRNA-associated Sm-like protein LSm3 15 31899909 31900214 - 116884339 MODEL JAAIVD010000010 pseudo 626131080 Itpk1 inositol-tetrakisphosphate 1-kinase ENCODES a protein that exhibits inositol-1,3,4,5-tetrakisphosphate 6-kinase activity (ortholog); inositol-1,3,4-trisphosphate 5-kinase activity (ortholog); inositol-1,3,4-trisphosphate 6-kinase activity (ortholog); INVOLVED IN necroptotic process (ortholog); neural tube development (ortholog); PARTICIPATES IN inositol metabolic pathway; inositol phosphate metabolic pathway; ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN apical plasma membrane (ortholog) 7 113843933 113976294 - 22301074;30032202 116905359 MODEL JAAIVD010000026;XM_032908277;XM_032908278;XM_032908279;XM_032908280 XP_032764168;XP_032764169;XP_032764170;XP_032764171 protein-coding 626131104 Braf B-Raf proto-oncogene, serine/threonine kinase ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); MAP kinase kinase activity (ortholog); INVOLVED IN alpha-beta T cell differentiation (ortholog); CD4-positive or CD8-positive, alpha-beta T cell lineage commitment (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN adenosine signaling pathway; altered extracellular signal-regulated Raf/Mek/Erk signaling pathway; colorectal cancer pathway; ASSOCIATED WITH adrenocortical carcinoma (ortholog); ameloblastoma (ortholog); Aortic Aneurysm, Giant Congenital (ortholog); FOUND IN cell body (ortholog); centriolar satellite (ortholog); ciliary basal body (ortholog) 6 100057507 100188855 + 22301074;30032202 116903923 MODEL JAAIVD010000024;XM_032906693;XM_032906694;XM_032906696 XP_032762584;XP_032762585;XP_032762587 serine/threonine-protein kinase B-raf protein-coding 626131133 Tcte1 t-complex-associated-testis-expressed 1 INVOLVED IN flagellated sperm motility (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN sperm flagellum (ortholog) 4 84353816 84363346 - 22301074;30032202 116899134 MODEL JAAIVD010000003;XM_032900668 XP_032756559 dynein regulatory complex subunit 5 protein-coding 626131141 LOC116888048 lamina-associated polypeptide 2 X 86952197 86954515 - 116888048 MODEL JAAIVD010000014 pseudo 626131142 Nfatc4 nuclear factor of activated T cells 4 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN brain-derived neurotrophic factor receptor signaling pathway (ortholog); branching involved in blood vessel morphogenesis (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; nuclear factor of activated T-cells signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); dilated cardiomyopathy (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 12 69186717 69195934 - 30032202 116913912 MODEL JAAIVD010000007;XM_032918188 XP_032774079 nuclear factor of activated T-cells, cytoplasmic 4 protein-coding 626131156 Slc16a13 solute carrier family 16 member 13 ASSOCIATED WITH Short Stature with Nonspecific Skeletal Abnormalities 1 (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 9 49819703 49823473 - 22301074;30032202 116909005 MODEL JAAIVD010000002;XM_032912476;XM_032912477 XP_032768367;XP_032768368 monocarboxylate transporter 13 protein-coding 626131167 Aldh2 aldehyde dehydrogenase 2 family member ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); carboxylesterase activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetaldehyde metabolic process (ortholog); aldehyde catabolic process (ortholog); apoptotic mitochondrial changes (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Acute Alcohol Sensitivity (ortholog); alcohol dependence (ortholog); alcohol use disorder (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 16 32219512 32251155 + 30032202 116885476 MODEL JAAIVD010000004;XM_032886762 XP_032742653 aldehyde dehydrogenase, mitochondrial protein-coding 626131184 LOC116909057 60S ribosomal protein L36a-like 9 62829229 62829573 - 22301074;30032202 116909057 MODEL JAAIVD010000002;XM_032912535 XP_032768426 protein-coding 626131187 LOC116899869 small nucleolar RNA SNORA17 4 77502681 77502811 + 116899869 MODEL JAAIVD010000003;XR_004387863 snorna 626131190 Sh2d2a SH2 domain containing 2A INVOLVED IN T cell proliferation (ortholog); PARTICIPATES IN Erk5 MAPK signaling pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); juvenile rheumatoid arthritis (ortholog); multiple sclerosis (ortholog) 3 65705905 65712515 - 30032202 116895428 MODEL JAAIVD010000012;XM_032896706 XP_032752597 SH2 domain-containing protein 2A protein-coding 626131201 Nxph4 neurexophilin 4 INVOLVED IN modulation of chemical synaptic transmission (ortholog); FOUND IN GABA-ergic synapse (ortholog); synapse (ortholog) 1 205976293 205985114 - 30032202 116890045 MODEL JAAIVD010000025;XM_032890816 XP_032746707 neurexophilin-4 protein-coding 626131207 LOC116915021 calponin-3-like 13 29515974 29516355 + 22301074 116915021 MODEL JAAIVD010000008;XM_032919430 XP_032775321 protein-coding 626131212 LOC116888150 L-lactate dehydrogenase A chain-like X 111194242 111195050 - 116888150 MODEL JAAIVD010000014 pseudo 626131213 LOC116897395 U6 spliceosomal RNA 3 61881648 61881754 - 116897395 MODEL JAAIVD010000012;XR_004387439 snrna 626131216 Ppcs phosphopantothenoylcysteine synthetase ENCODES a protein that exhibits identical protein binding (ortholog); phosphopantothenate--cysteine ligase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acetyl-CoA biosynthetic process (ortholog); coenzyme A biosynthetic process (ortholog); heart process (ortholog); PARTICIPATES IN pantothenic acid metabolic pathway; ASSOCIATED WITH dilated cardiomyopathy 2C (ortholog) 1 37539810 37543724 + 30032202 116897478 MODEL JAAIVD010000025;XM_032899137;XM_032899138;XM_032899139 XP_032755028;XP_032755029;XP_032755030 phosphopantothenate--cysteine ligase protein-coding 626131229 LOC116894312 alcohol sulfotransferase 2 144078510 144132972 - 22301074;30032202 116894312 MODEL JAAIVD010000001;XM_032896008 XP_032751899 protein-coding 626131239 A4galt alpha 1,4-galactosyltransferase (P1PK blood group) ENCODES a protein that exhibits galactosyltransferase activity (ortholog); lactosylceramide 4-alpha-galactosyltransferase activity (ortholog); toxic substance binding (ortholog); INVOLVED IN globoside biosynthetic process (ortholog); plasma membrane organization (ortholog); ASSOCIATED WITH Burkitt lymphoma (ortholog); Caffey disease (ortholog); NOR POLYAGGLUTINATION SYNDROME (ortholog); FOUND IN membrane (ortholog) 1 252640924 252664872 - 30032202 116914406 MODEL JAAIVD010000025;XM_032918649;XM_032918659 XP_032774540;XP_032774550 alpha 1,4-galactosyltransferase (P blood group);lactosylceramide 4-alpha-galactosyltransferase protein-coding 626131251 Ube2z ubiquitin conjugating enzyme E2 Z ENCODES a protein that exhibits molecular adaptor activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 58326494 58346828 + 30032202 116908600 MODEL JAAIVD010000002;XM_032911823 XP_032767714 ubiquitin-conjugating enzyme E2 Z protein-coding 626131262 LOC116902683 C-type lectin domain family 4 member A-like 6 37860775 37865225 + 30032202 116902683 MODEL JAAIVD010000024;XM_032905042 XP_032760933 protein-coding 626131269 Doc2b double C2 domain beta ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); syntaxin binding (ortholog); INVOLVED IN calcium ion-regulated exocytosis of neurotransmitter (ortholog); calcium-dependent activation of synaptic vesicle fusion (ortholog); exocytosis (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog) 9 94489705 94517046 - 22301074 116909872 MODEL JAAIVD010000002;XM_032913604 XP_032769495 double C2-like domain-containing protein beta protein-coding 626131282 LOC116889786 ribosomal protein 63, mitochondrial 22301074;30032202 116889786 MODEL JAAIVD010000298;XM_032890636 XP_032746527 protein-coding 626131283 LOC116903025 high mobility group protein B1-like 6 156667864 156668451 - 116903025 MODEL JAAIVD010000024 pseudo 626131284 LOC116910901 60S ribosomal protein L23a-like 10 47244954 47245361 - 22301074;30032202 116910901 MODEL JAAIVD010000005;XM_032914667 XP_032770558 protein-coding 626131287 LOC116895987 synaptosomal-associated protein 23-like 3 163620613 163684665 - 116895987 MODEL JAAIVD010000012 pseudo 626131288 Serp2 stress associated endoplasmic reticulum protein family member 2 12 47843277 47866841 + 22301074;30032202 116913658 MODEL JAAIVD010000007;XM_032917944 XP_032773835 stress-associated endoplasmic reticulum protein 2 protein-coding 626131296 LOC116888089 60S ribosomal protein L10a-like X 93763494 93782042 - 116888089 MODEL JAAIVD010000014 pseudo 626131297 LOC116893188 olfactory receptor 56A4-like 2 104036021 104038010 - 22301074 116893188 MODEL JAAIVD010000001;XM_032895091 XP_032750982 protein-coding 626131301 Hus1 HUS1 checkpoint clamp component INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); FOUND IN checkpoint clamp complex (ortholog); nucleus (ortholog) 11 78059992 78071112 - 22301074;30032202 116912588 MODEL JAAIVD010000006;XM_032916704;XM_032916705 XP_032772595;XP_032772596 checkpoint protein HUS1 protein-coding 626131318 LOC116895535 alpha-enolase-like 3 120404495 120405805 - 22301074;30032202 116895535 MODEL JAAIVD010000012;XM_032896780 XP_032752671 protein-coding 626131322 Serinc5 serine incorporator 5 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); myelination (ortholog); phosphatidylserine metabolic process (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 3 203573408 203663038 - 22301074;30032202 116897297 MODEL JAAIVD010000012;XM_032899033 XP_032754924 protein-coding 626131338 LOC116907174 olfactory receptor 7G2-like 8 15000002 15000940 - 22301074;30032202 116907174 MODEL JAAIVD010000027;XM_032910128 XP_032766019 protein-coding 626131341 LOC116905632 partner of Y14 and mago-like 7 21981307 21985736 - 116905632 MODEL JAAIVD010000026 pseudo 626131342 LOC116887958 trafficking protein particle complex subunit 13-like X 64973591 64974355 + 30032202 116887958 MODEL JAAIVD010000014;XM_032889403 XP_032745294 protein-coding 626131345 LOC116909119 elongin-C 9 40385249 40385697 - 22301074;30032202 116909119 MODEL JAAIVD010000002;XM_032912595 XP_032768486 protein-coding 626131350 LOC116911627 peptidyl-prolyl cis-trans isomerase D-like 10 32382660 32390825 - 116911627 MODEL JAAIVD010000005 pseudo 626131351 LOC116889537 small nucleolar RNA SNORA26 X 58974513 58974633 - 116889537 MODEL JAAIVD010000014;XR_004386472 snorna 626131354 Nme3 NME/NM23 nucleoside diphosphate kinase 3 ENCODES a protein that exhibits ADP binding (ortholog); cAMP binding (ortholog); GDP binding (ortholog); INVOLVED IN DNA repair (ortholog); dTTP biosynthetic process (ortholog); mitochondrial fusion (ortholog); PARTICIPATES IN de novo pyrimidine biosynthetic pathway; FOUND IN ciliary basal body (ortholog); cytoplasm (ortholog); mitochondrial outer membrane (ortholog) 9 2176881 2178213 + 22301074;30032202 116909335 MODEL JAAIVD010000002;XM_032912878;XM_032912879 XP_032768769;XP_032768770 nucleoside diphosphate kinase 3 protein-coding 626131367 LOC116897764 60S ribosomal protein L31-like 4 726216 726646 - 22301074;30032202 116897764 MODEL JAAIVD010000003;XM_032899195 XP_032755086 protein-coding 626131372 LOC116886787 U6 spliceosomal RNA 17 13983880 13983986 + 116886787 MODEL JAAIVD010000011;XR_004386180 snrna 626131375 LOC116893018 zinc finger protein 260-like 1 13264703 13283546 + 116893018 MODEL JAAIVD010000025;XR_004386992 pseudo 626131380 Xrcc2 X-ray repair cross complementing 2 ENCODES a protein that exhibits four-way junction DNA binding (ortholog); INVOLVED IN centrosome cycle (ortholog); DNA damage response (ortholog); DNA repair (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; ASSOCIATED WITH breast carcinoma (ortholog); Breast Neoplasms (ortholog); colon cancer (ortholog); FOUND IN centrosome (ortholog); nucleoplasm (ortholog); Rad51B-Rad51C-Rad51D-XRCC2 complex (ortholog) 6 154861258 154877059 - 22301074;30032202 116904227 MODEL JAAIVD010000024;XM_032907165 XP_032763056 DNA repair protein XRCC2 protein-coding 626131387 Slc20a2 solute carrier family 20 member 2 ENCODES a protein that exhibits sodium:phosphate symporter activity (ortholog); virus receptor activity (ortholog); INVOLVED IN positive regulation of bone mineralization (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH basal ganglia calcification (ortholog); basal ganglia disease (ortholog); calcinosis (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 13 63864825 63953386 - 22301074;30032202 116915033 MODEL JAAIVD010000008;XM_032919439 XP_032775330 sodium-dependent phosphate transporter 2 protein-coding 626131402 Ireb2 iron responsive element binding protein 2 ENCODES a protein that exhibits 4 iron, 4 sulfur cluster binding (ortholog); iron-responsive element binding (ortholog); mRNA regulatory element binding translation repressor activity (ortholog); INVOLVED IN cellular response to epidermal growth factor stimulus (ortholog); cellular response to hypoxia (ortholog); cellular response to iron(III) ion (ortholog); PARTICIPATES IN doxorubicin response pathway; iron homeostasis pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); anemia (ortholog); Brain Hypoxia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 48953189 49000050 + 30032202 116908102 MODEL JAAIVD010000027;XM_032911381 XP_032767272 iron-responsive element-binding protein 2 protein-coding 626131428 LOC116887778 small nucleolar RNA SNORD48 18 7018111 7018166 - 116887778 MODEL JAAIVD010000013;XR_004386275 snorna 626131431 LOC116900651 uncharacterized LOC116900651 5 114432331 114442102 - 116900651 MODEL JAAIVD010000023;XR_004387943 ncrna 626131436 LOC116890596 small nucleolar RNA SNORA17 1 185393471 185393593 + 116890596 MODEL JAAIVD010000025 pseudo 626131437 Lman1 lectin, mannose binding 1 ENCODES a protein that exhibits identical protein binding (ortholog); metal ion binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); endoplasmic reticulum organization (ortholog); gene expression (ortholog); PARTICIPATES IN protein secretory pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); factor V deficiency (ortholog); factor XIII deficiency (ortholog); FOUND IN COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum-Golgi intermediate compartment (ortholog) 15 65264161 65285572 + 30032202 116884518 MODEL JAAIVD010000010;XM_032885649;XM_032885651;XM_032885652 XP_032741540;XP_032741542;XP_032741543 protein ERGIC-53 protein-coding 626131459 Calhm5 calcium homeostasis modulator family member 5 18 24126590 24132104 - 30032202 116886899 MODEL JAAIVD010000013;XM_032888365 XP_032744256 calcium homeostasis modulator protein 5 protein-coding 626131464 Col26a1 collagen type XXVI alpha 1 chain INVOLVED IN positive regulation of cell-substrate adhesion (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular matrix (ortholog); Golgi apparatus (ortholog) 16 17133966 17281269 + 22301074 116885367 MODEL JAAIVD010000004;XM_032886641;XM_032886642 XP_032742532;XP_032742533 collagen alpha-1(XXVI) chain protein-coding 626131485 Rapgef1 Rap guanine nucleotide exchange factor 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN blood vessel development (ortholog); cell-cell adhesion (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; E-cadherin signaling pathway; erythropoietin signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); mesangial proliferative glomerulonephritis (ortholog); Monoclonal B-Cell Lymphocytosis (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); perinuclear region of cytoplasm (ortholog) 5 6992705 7083748 - 22301074;30032202 116901217 MODEL JAAIVD010000023;XM_032902934;XM_032902935 XP_032758825;XP_032758826 protein-coding 626131519 Tspan17 tetraspanin 17 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN establishment of protein localization to organelle (ortholog); protein maturation (ortholog); regulation of membrane protein ectodomain proteolysis (ortholog) 14 73130145 73137764 + 22301074;30032202 116883712 MODEL JAAIVD010000009;XM_032884925;XM_032884926 XP_032740816;XP_032740817 tetraspanin-17 protein-coding 626131535 LOC116899743 U6 spliceosomal RNA 4 98131817 98131923 + 116899743 MODEL JAAIVD010000003;XR_004387759 snrna 626131538 Sox17 SRY-box transcription factor 17 ENCODES a protein that exhibits beta-catenin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN angiogenesis (ortholog); cardiac cell fate determination (ortholog); cardiogenic plate morphogenesis (ortholog); ASSOCIATED WITH biliary atresia (ortholog); cholangiocarcinoma (ortholog); Colorectal Neoplasms (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 1 139890324 139895811 - 30032202 116903673 MODEL JAAIVD010000025;XM_032906336;XM_032906344;XM_032906353;XM_032906362 XP_032762227;XP_032762235;XP_032762244;XP_032762253 transcription factor SOX-17 protein-coding 626131553 LOC116898570 UDP-glucuronosyltransferase 1-8-like 4 160145568 160150982 + 116898570 MODEL JAAIVD010000003 pseudo 626131554 Skp1 S-phase kinase associated protein 1 ENCODES a protein that exhibits beta-catenin binding (ortholog); cullin family protein binding (ortholog); F-box domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); chromatin remodeling (ortholog); maintenance of protein location in nucleus (ortholog); PARTICIPATES IN Notch signaling pathway; nuclear factor kappa B signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH Keratoconus 1 (ortholog); FOUND IN centrosome (ortholog); Cul7-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 9 34727602 34742934 + 30032202 116908809 MODEL JAAIVD010000002;XM_032912215 XP_032768106 S-phase kinase-associated protein 1 protein-coding 626131564 LOC116885596 40S ribosomal protein S15a-like 16 8217802 8218252 - 116885596 MODEL JAAIVD010000004 pseudo 626131565 Ptpmt1 protein tyrosine phosphatase mitochondrial 1 ENCODES a protein that exhibits phosphatidylglycerophosphatase activity (ortholog); phosphatidylinositol-5-phosphate phosphatase activity (ortholog); INVOLVED IN cardiolipin biosynthetic process (ortholog); negative regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); regulation of intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN cardiolipin biosynthetic pathway; glycerophospholipid metabolic pathway; inositol metabolic pathway; ASSOCIATED WITH Neurodevelopmental disorder with ataxia and brain abnormalities (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 65082485 65091490 - 22301074;30032202 116901605 MODEL JAAIVD010000023;XM_032903632 XP_032759523 phosphatidylglycerophosphatase and protein-tyrosine phosphatase 1 protein-coding 626131573 Cacul1 CDK2 associated cullin domain 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of protein kinase activity (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog) 2 55566801 55625840 + 22301074 116891308 MODEL JAAIVD010000001;XM_032892219;XM_032892220;XM_032892221 XP_032748110;XP_032748111;XP_032748112 CDK2-associated and cullin domain-containing protein 1 protein-coding 626131594 LOC116895393 small integral membrane protein 15-like 3 59367278 59367491 - 116895393 MODEL JAAIVD010000012 pseudo 626131595 LOC116908460 U6 spliceosomal RNA 8 5513443 5513552 + 116908460 MODEL JAAIVD010000027;XR_004388978 snrna 626131598 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 230311681 230311753 + 116890638 MODEL JAAIVD010000025 trna 626131599 LOC116900410 olfactory receptor 4C6-like 5 70258964 70259884 + 22301074 116900410 MODEL JAAIVD010000023;XM_032902155 XP_032758046 protein-coding 626131602 Egln3 egl-9 family hypoxia inducible factor 3 ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); peptidyl-proline 4-dioxygenase activity (ortholog); peptidyl-proline dioxygenase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); protein hydroxylation (ortholog); regulation of cell population proliferation (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; vascular endothelial growth factor signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); clear cell renal cell carcinoma (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 67559876 67585084 - 22301074;30032202 116905046 MODEL JAAIVD010000026;XM_032907734 XP_032763625 egl nine homolog 3 protein-coding 626131611 LOC116902799 40S ribosomal protein S7-like 6 83407739 83408313 + 116902799 MODEL JAAIVD010000024 pseudo 626131612 Spint4 serine peptidase inhibitor, Kunitz type 4 5 153243089 153244762 - 22301074;30032202 116900771 MODEL JAAIVD010000023;XM_032902483 XP_032758374 kunitz-type protease inhibitor 4 protein-coding 626131616 Tnfrsf1b TNF receptor superfamily member 1B ENCODES a protein that exhibits tumor necrosis factor binding (ortholog); tumor necrosis factor receptor activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN aortic valve development (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH acne (ortholog); acquired immunodeficiency syndrome (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN axon (ortholog); membrane (ortholog); membrane raft (ortholog) 1 13578144 13609316 + 22301074;30032202 116893027 MODEL JAAIVD010000025;XM_032894992 XP_032750883 tumor necrosis factor receptor superfamily member 1B protein-coding 626131630 LOC116905040 tensin-2-like 7 65579442 65582967 + 116905040 MODEL JAAIVD010000026 pseudo 626131631 LOC116897660 U4 spliceosomal RNA 3 69068170 69068301 - 116897660 MODEL JAAIVD010000012 pseudo 626131632 LOC116906122 ATPase inhibitor, mitochondrial-like 7 84977076 84987076 + 116906122 MODEL JAAIVD010000026 pseudo 626131633 Cdk8 cyclin dependent kinase 8 ENCODES a protein that exhibits protein kinase activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of triglyceride metabolic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH dilated cardiomyopathy (ortholog); Ebstein anomaly (ortholog); genetic disease (ortholog); FOUND IN CKM complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog); mediator complex (ortholog) 16 7511451 7575120 - 22301074;30032202 116885952 MODEL JAAIVD010000004;XM_032887271 XP_032743162 cyclin-dependent kinase 8 protein-coding 626131650 Crp C-reactive protein ENCODES a protein that exhibits calcium ion binding (ortholog); cholesterol binding (ortholog); complement component C1q complex binding (ortholog); INVOLVED IN acute-phase response (ortholog); cellular response to calcium ion (ortholog); cellular response to interleukin-6 (ortholog); PARTICIPATES IN classical complement pathway; interleukin-6 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); acute kidney failure (ortholog); FOUND IN extracellular space (ortholog); filopodium (ortholog); growth cone (ortholog) 10 51808394 51810193 + 30032202 116911093 H6X2S9 MODEL JAAIVD010000005;JQ438856;XM_032914923 AFA37828;XP_032770814 protein-coding 626131656 Bckdha branched chain keto acid dehydrogenase E1 subunit alpha ENCODES a protein that exhibits branched-chain 2-oxo acid dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA (ortholog); branched-chain amino acid catabolic process (ortholog); response to cAMP (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN branched-chain alpha-ketoacid dehydrogenase complex (ortholog); mitochondrion (ortholog) 2 169135943 169164035 + 22301074;30032202 116892454 MODEL JAAIVD010000001;XM_032894166;XM_032894167 XP_032750057;XP_032750058 2-oxoisovalerate dehydrogenase subunit alpha, mitochondrial protein-coding 626131670 Arid3b AT-rich interaction domain 3B INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleoplasm (ortholog) 8 51676522 51723618 - 22301074;30032202 116906950 MODEL JAAIVD010000027;XM_032909870 XP_032765761 AT-rich interactive domain-containing protein 3B protein-coding 626131683 LOC116913324 ETS-related transcription factor Elf-2-like 12 64343393 64344882 + 116913324 MODEL JAAIVD010000007 pseudo 626131684 LOC116904719 small nucleolar RNA SNORA17 6 61143350 61143481 + 116904719 MODEL JAAIVD010000024;XR_004388412 snorna 626131687 LOC116906808 olfactory receptor 1082-like 1 156859604 156860536 - 22301074;30032202 116906808 MODEL JAAIVD010000025;XM_032909687 XP_032765578 protein-coding 626131690 Upk1b uroplakin 1B INVOLVED IN epithelial cell differentiation (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); apical plasma membrane urothelial plaque (ortholog) 4 23703935 23722299 - 22301074 116897988 MODEL JAAIVD010000003;XM_032899389 XP_032755280 uroplakin-1b protein-coding 626131701 LOC116898017 histone deacetylase 1-like 4 76901320 76902699 - 116898017 MODEL JAAIVD010000003 pseudo 626131702 LOC116904377 aurora kinase A-like 6 90358792 90362555 + 116904377 MODEL JAAIVD010000024 pseudo 626131703 LOC116899835 small nucleolar RNA SNORA48 4 143990913 143991056 - 116899835 MODEL JAAIVD010000003;XR_004387832 snorna 626131706 Pde4d phosphodiesterase 4D ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); ATPase binding (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acrodysostosis (ortholog); Acrodysostosis 2, with or without Hormone Resistance (ortholog); amphetamine abuse (ortholog); FOUND IN calcium channel complex (ortholog); centrosome (ortholog); cilium (ortholog) 3 187054523 187853199 - 22301074;30032202 116897204 MODEL JAAIVD010000012;XM_032898910;XM_032898911;XM_032898912;XM_032898913 XP_032754801;XP_032754802;XP_032754803;XP_032754804 cAMP-specific 3',5'-cyclic phosphodiesterase 4D protein-coding 626131734 LOC116887735 small nucleolar RNA SNORA17 18 38575088 38575214 + 116887735 MODEL JAAIVD010000013;XR_004386246 snorna 626131737 Rnf167 ring finger protein 167 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to leucine starvation (ortholog); cellular response to nutrient levels (ortholog); ASSOCIATED WITH systemic primary carnitine deficiency disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endolysosome membrane (ortholog) 9 50258166 50262486 + 22301074;30032202 116910490 MODEL JAAIVD010000002;XM_032914380;XM_032914381 XP_032770271;XP_032770272 E3 ubiquitin-protein ligase RNF167 protein-coding 626131753 LOC116895709 uncharacterized LOC116895709 3 215339998 215341467 - 116895709 MODEL JAAIVD010000012;XR_004387306 ncrna 626131757 Pou3f3 POU class 3 homeobox 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cerebral cortex radially oriented cell migration (ortholog); chemical homeostasis (ortholog); forebrain ventricular zone progenitor cell division (ortholog); ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 118851127 118852611 + 22301074;30032202 116899336 MODEL JAAIVD010000003;XM_032901024 XP_032756915 POU domain, class 3, transcription factor 3 protein-coding 626131762 Pax1 paired box 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Goldenhar syndrome (ortholog); Otofaciocervical Syndrome 1 (ortholog) 5 126946314 126955181 + 30032202 116900666 MODEL JAAIVD010000023;XM_032902369 XP_032758260 paired box protein Pax-1 protein-coding 626131772 Tsc22d4 TSC22 domain family member 4 INVOLVED IN glucose homeostasis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron cellular homeostasis (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); nucleus (ortholog) 16 16255521 16277126 - 22301074;30032202 116885330 MODEL JAAIVD010000004;XM_032886594;XM_032886595 XP_032742485;XP_032742486 TSC22 domain family protein 4 protein-coding 626131786 LOC116906269 keratin-associated protein 21-1-like 7 124597705 124608963 + 116906269 MODEL JAAIVD010000026;XM_032909157 XP_032765048 protein-coding 626131791 LOC116887940 uncharacterized LOC116887940 X 62025649 62027226 - 116887940 MODEL JAAIVD010000014 pseudo 626131792 LOC116891974 uncharacterized LOC116891974 2 129974117 129983449 - 116891974 MODEL JAAIVD010000001;XR_004386884;XR_004386885 ncrna 626131800 Sdcbp syndecan binding protein ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); ephrin receptor binding (ortholog); frizzled binding (ortholog); INVOLVED IN negative regulation of receptor internalization (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of cell growth (ortholog); PARTICIPATES IN interleukin-5 signaling pathway; syndecan signaling pathway; ASSOCIATED WITH osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular exosome (ortholog) 1 136591042 136617001 - 30032202 116903595 MODEL JAAIVD010000025;XM_032906239;XM_032906244;XM_032906252 XP_032762130;XP_032762135;XP_032762143 syntenin-1 protein-coding 626131820 LOC116897079 bone morphogenetic protein 8B 1 35125497 35149901 - 22301074;30032202 116897079 MODEL JAAIVD010000025;XM_032898707;XM_032898717;XM_032898726;XM_032898735 XP_032754598;XP_032754608;XP_032754617;XP_032754626 protein-coding 626131839 Trnap-cgg transfer RNA proline (anticodon CGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 848519 848590 + 116910781 MODEL JAAIVD010000002 trna 626131840 LOC116893016 uncharacterized LOC116893016 2 224934897 224940625 + 116893016 MODEL JAAIVD010000001;XR_004386991 ncrna 626131844 Panx2 pannexin 2 ENCODES a protein that exhibits gap junction channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell signaling (ortholog); response to ischemia (ortholog); PARTICIPATES IN neuron-to-neuron signaling pathway via the electrical synapse; ASSOCIATED WITH cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); plasma membrane (ortholog) 1 258368371 258381028 + 30032202 116914904 MODEL JAAIVD010000025;XM_032919347;XM_032919351 XP_032775238;XP_032775242 pannexin-2 protein-coding 626131855 Stk39 serine/threonine kinase 39 ENCODES a protein that exhibits ion channel regulator activity (ortholog); kinase activity (ortholog); potassium channel inhibitor activity (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hyperosmotic response (ortholog); cellular hypotonic response (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); autistic disorder (ortholog); Gitelman syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell body (ortholog) 5 45569457 45829352 - 22301074 116901474 MODEL JAAIVD010000023;XM_032903422 XP_032759313 STE20/SPS1-related proline-alanine-rich protein kinase protein-coding 626131877 LOC116889673 elongation factor 1-gamma-like 1 144514970 144516297 - 116889673 MODEL JAAIVD010000025 pseudo 626131878 LOC116913026 U2 spliceosomal RNA 11 55485229 55485297 - 116913026 MODEL JAAIVD010000006 pseudo 626131879 LOC116915155 U4 spliceosomal RNA 13 47993115 47993246 - 116915155 MODEL JAAIVD010000008 pseudo 626131880 LOC116910691 small nucleolar RNA SNORA29 9 37897480 37897619 + 116910691 MODEL JAAIVD010000002;XR_004389220 snorna 626131883 Smad4 SMAD family member 4 ENCODES a protein that exhibits chromatin binding (ortholog); collagen binding (ortholog); DNA binding (ortholog); INVOLVED IN adrenal gland development (ortholog); anatomical structure morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; Bone morphogenetic proteins signaling pathway; colorectal cancer pathway; ASSOCIATED WITH Acro-Osteolysis (ortholog); aortic disease (ortholog); brachydactyly (ortholog); FOUND IN activin responsive factor complex (ortholog); centrosome (ortholog); chromatin (ortholog) 15 58292542 58337603 + 22301074;30032202 116884986 MODEL JAAIVD010000010;XM_032886205;XM_032886206 XP_032742096;XP_032742097 mothers against decapentaplegic homolog 4 protein-coding 626131900 Dnajb13 DnaJ heat shock protein family (Hsp40) member B13 INVOLVED IN axonemal central apparatus assembly (ortholog); ASSOCIATED WITH Cough (ortholog); primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 34 (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); motile cilium (ortholog) 2 98804029 98817191 - 22301074;30032202 116891741 MODEL JAAIVD010000001;XM_032893047;XM_032893048 XP_032748938;XP_032748939 dnaJ homolog subfamily B member 13 protein-coding 626131914 Ap5z1 adaptor related protein complex 5 subunit zeta 1 INVOLVED IN autophagosome assembly (ortholog); autophagy (ortholog); axon development (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytoplasm (ortholog); lysosome (ortholog); nuclear speck (ortholog) 16 10666678 10679894 - 22301074;30032202 116885551 MODEL JAAIVD010000004;XM_032886844 XP_032742735 AP-5 complex subunit zeta-1 protein-coding 626131935 Cabyr calcium binding tyrosine phosphorylation regulated ENCODES a protein that exhibits calcium ion binding (ortholog); enzyme binding (ortholog); protein domain specific binding (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); male infertility (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); motile cilium (ortholog) 15 30950126 30961265 - 30032202 116884517 MODEL JAAIVD010000010;XM_032885648 XP_032741539 calcium-binding tyrosine phosphorylation-regulated protein protein-coding 626131943 Prtfdc1 phosphoribosyl transferase domain containing 1 ENCODES a protein that exhibits hypoxanthine phosphoribosyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN GMP catabolic process (ortholog); guanine salvage (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Mouth Neoplasms (ortholog); Ovarian Neoplasms (ortholog) 14 2967155 3062899 + 22301074 116883407 MODEL JAAIVD010000009;XM_032884530;XM_032884531;XM_032884532 XP_032740421;XP_032740422;XP_032740423 phosphoribosyltransferase domain-containing protein 1 protein-coding 626131959 LOC116895086 small nucleolar RNA SNORD100 2 209857095 209857169 - 116895086 MODEL JAAIVD010000001;XR_004387253 snorna 626131962 LOC116910354 CMRF35-like molecule 3 9 69232636 69238598 + 30032202 116910354 MODEL JAAIVD010000002;XM_032914209 XP_032770100 protein-coding 626131967 Ppp3cb protein phosphatase 3 catalytic subunit beta ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent protein serine/threonine phosphatase activity (ortholog); calmodulin binding (ortholog); INVOLVED IN antibacterial innate immune response (ortholog); calcineurin-mediated signaling (ortholog); calcineurin-NFAT signaling cascade (ortholog); PARTICIPATES IN calcineurin signaling pathway; dopamine signaling pathway; interleukin-12 signaling pathway; ASSOCIATED WITH aortic valve stenosis (ortholog); focal segmental glomerulosclerosis (ortholog); Left Ventricular Hypertrophy (ortholog); FOUND IN calcineurin complex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 12 90305466 90350356 - 30032202 116913308 MODEL JAAIVD010000007;XM_032917444;XM_032917445 XP_032773335;XP_032773336 serine/threonine-protein phosphatase 2B catalytic subunit beta isoform protein-coding 626131989 Cfap70 cilia and flagella associated protein 70 INVOLVED IN cell morphogenesis (ortholog); cilium assembly (ortholog); cilium movement (ortholog); ASSOCIATED WITH oligoasthenoteratozoospermia (ortholog); spermatogenic failure 41 (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 12 90194463 90254759 - 22301074;30032202 116913328 MODEL JAAIVD010000007;XM_032917472;XM_032917473 XP_032773363;XP_032773364 cilia- and flagella-associated protein 70 protein-coding 626132022 LOC116887032 60S ribosomal protein L19-like 18 3847551 3848158 + 22301074;30032202 116887032 MODEL JAAIVD010000013;XM_032888524 XP_032744415 protein-coding 626132027 LOC116894038 olfactory receptor 52K1-like 2 102378571 102379575 - 22301074 116894038 MODEL JAAIVD010000001;XM_032895757 XP_032751648 protein-coding 626132030 Lypla2 lysophospholipase 2 ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); INVOLVED IN acylglycerol catabolic process (ortholog); prostaglandin catabolic process (ortholog); protein depalmitoylation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi stack (ortholog) 1 22257206 22261553 + 30032202 116894469 MODEL JAAIVD010000025;XM_032896183 XP_032752074 acyl-protein thioesterase 2 protein-coding 626132044 LOC116884121 U6 spliceosomal RNA 14 13650585 13650686 + 116884121 MODEL JAAIVD010000009;XR_004385851 snrna 626132047 LOC116894713 pancreatic progenitor cell differentiation and proliferation factor-like 2 123888910 123889144 + 22301074 116894713 MODEL JAAIVD010000001;XM_032896411 XP_032752302 protein-coding 626132051 LOC116913161 Y-linked testis-specific protein 1-like 12 45948890 45952755 - 116913161 MODEL JAAIVD010000007 pseudo 626132052 Kansl2 KAT8 regulatory NSL complex subunit 2 ASSOCIATED WITH intellectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); histone acetyltransferase complex (ortholog) 1 271338654 271355672 - 30032202 116884710 MODEL JAAIVD010000025;XM_032885899;XM_032885907;XM_032885915;XM_032885925;XM_032885935 XP_032741790;XP_032741798;XP_032741806;XP_032741816;XP_032741826 protein-coding 626132084 LOC116910760 U6 spliceosomal RNA 9 28772152 28772258 - 116910760 MODEL JAAIVD010000002;XR_004389270 snrna 626132087 Slx4 SLX4 structure-specific endonuclease subunit ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN DNA double-strand break processing involved in repair via single-strand annealing (ortholog); DNA repair (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Fanconi anemia (ortholog); FOUND IN chromatin (ortholog); chromosome, telomeric region (ortholog); ERCC4-ERCC1 complex (ortholog) 9 17846638 17867335 + 22301074;30032202 116909299 MODEL JAAIVD010000002;XM_032912840 XP_032768731 structure-specific endonuclease subunit SLX4 protein-coding 626132105 LOC116911411 40S ribosomal protein S16-like 10 56599741 56600243 + 116911411 MODEL JAAIVD010000005 pseudo 626132106 LOC116886014 small nucleolar RNA SNORA81 16 23996726 23996907 + 116886014 MODEL JAAIVD010000004;XR_004386083 snorna 626132109 LOC116897814 T-kininogen 1-like 4 7801610 7822960 + 116897814 MODEL JAAIVD010000003 pseudo 626132110 Gjb6 gap junction protein beta 6 ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); gap junction channel activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); ear morphogenesis (ortholog); gap junction assembly (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 3B (ortholog); autosomal recessive nonsyndromic deafness 1A (ortholog); autosomal recessive nonsyndromic deafness 1B (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); cell junction (ortholog) 12 67679952 67690237 + 22301074;30032202 116913787 MODEL JAAIVD010000007;XM_032918093;XM_032918095;XM_032918096 XP_032773984;XP_032773986;XP_032773987 gap junction beta-6 protein protein-coding 626132122 Zp3 zona pellucida glycoprotein 3 ENCODES a protein that exhibits acrosin binding (ortholog); carbohydrate binding (ortholog); identical protein binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); blastocyst formation (ortholog); egg coat formation (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 3 (ortholog); FOUND IN egg coat (ortholog); extracellular matrix (ortholog); extracellular space (ortholog) 16 18030729 18037628 - 30032202 116885694 Q6VMK7 MODEL JAAIVD010000004;XM_032886999;Y10823 CAA71787;XP_032742890 zona pellucida sperm-binding protein 3 protein-coding 626132134 Lhfpl3 LHFPL tetraspan subfamily member 3 ASSOCIATED WITH Breast Cancer, Familial (ortholog) 6 151961720 152487680 + 30032202 116904186 MODEL JAAIVD010000024;XM_032907093;XM_032907095;XM_032907096 XP_032762984;XP_032762986;XP_032762987 LHFPL tetraspan subfamily member 3 protein protein-coding 626132146 LOC116911570 60S ribosomal protein L30-like 10 55813689 55814311 + 30032202 116911570 MODEL JAAIVD010000005;XM_032915558 XP_032771449 protein-coding 626132150 LOC116897551 U1 spliceosomal RNA 3 43252056 43252218 + 116897551 MODEL JAAIVD010000012;XR_004387564 snrna 626132153 Has1 hyaluronan synthase 1 ENCODES a protein that exhibits hyaluronan synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to platelet-derived growth factor stimulus (ortholog); estrous cycle (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Kidney Reperfusion Injury (ortholog); myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 2 100751880 100763998 + 30032202 116891788 MODEL JAAIVD010000001;XM_032893139 XP_032749030 protein-coding 626132162 LOC116911704 olfactory receptor 6P1 10 53011036 53011989 + 22301074 116911704 MODEL JAAIVD010000005;XM_032915668 XP_032771559 protein-coding 626132165 Pfas phosphoribosylformylglycinamidine synthase ENCODES a protein that exhibits phosphoribosylformylglycinamidine synthase activity (ortholog); INVOLVED IN 'de novo' AMP biosynthetic process (ortholog); 'de novo' IMP biosynthetic process (ortholog); 'de novo' XMP biosynthetic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH colon adenocarcinoma (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog) 9 48581675 48603362 - 22301074 116908919 MODEL JAAIVD010000002;XM_032912376 XP_032768267 protein-coding 626132198 Krt36 keratin 36 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); INVOLVED IN regulation of keratinocyte differentiation (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 9 54849403 54852993 - 22301074;30032202 116909940 MODEL JAAIVD010000002;XM_032913714 XP_032769605 keratin, type I cuticular Ha6 protein-coding 626132209 Dab2ip DAB2 interacting protein ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); death receptor binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell motility involved in cerebral cortex radial glia guided migration (ortholog); cellular response to epidermal growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); carotid artery occlusion (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); axon (ortholog); cerebellar mossy fiber (ortholog) 5 13740170 13910913 - 22301074 116901347 MODEL JAAIVD010000023;XM_032903183;XM_032903184;XM_032903185;XM_032903186;XM_032903189;XM_032903190;XM_032903191;XM_032903192;XM_032903193;XM_032903194;XM_032903195 XP_032759074;XP_032759075;XP_032759076;XP_032759077;XP_032759080;XP_032759081;XP_032759082;XP_032759083;XP_032759084;XP_032759085;XP_032759086 disabled homolog 2-interacting protein protein-coding 626132260 Trip12 thyroid hormone receptor interactor 12 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); heterochromatin boundary formation (ortholog); protein polyubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Clark-Baraitser syndrome (ortholog); Developmental Disease (ortholog); genetic disease (ortholog); FOUND IN nuclear speck (ortholog); nucleoplasm (ortholog) 4 157415697 157538312 - 22301074;30032202 116899573 MODEL JAAIVD010000003;XM_032901488;XM_032901489;XM_032901490;XM_032901491;XM_032901492;XM_032901493;XM_032901494;XM_032901495;XM_032901496;XM_032901497;XM_032901498;XM_032901499;XM_032901500;XM_032901501;XM_032901502;XM_032901503;XM_032901504;XM_032901505;XM_032901506;XM_032901507;XM_032901508;XM_032901509;XM_032901510 XP_032757379;XP_032757380;XP_032757381;XP_032757382;XP_032757383;XP_032757384;XP_032757385;XP_032757386;XP_032757387;XP_032757388;XP_032757389;XP_032757390;XP_032757391;XP_032757392;XP_032757393;XP_032757394;XP_032757395;XP_032757396;XP_032757397;XP_032757398;XP_032757399;XP_032757400;XP_032757401 E3 ubiquitin-protein ligase TRIP12 protein-coding 626132353 Nuak2 NUAK family kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to glucose starvation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH Anencephaly 2 (ortholog); FOUND IN nuclear speck (ortholog) 10 3513628 3529879 - 22301074;30032202 116911342 MODEL JAAIVD010000005;XM_032915258 XP_032771149 NUAK family SNF1-like kinase 2 protein-coding 626132364 LOC116890063 60S ribosomal protein L38-like 1 213486374 213487904 + 22301074;30032202 116890063 MODEL JAAIVD010000025;XM_032890829 XP_032746720 protein-coding 626132369 Txnrd1 thioredoxin reductase 1 ENCODES a protein that exhibits FAD binding (ortholog); identical protein binding (ortholog); mercury ion binding (ortholog); INVOLVED IN benzene-containing compound metabolic process (ortholog); cell population proliferation (ortholog); cellular response to copper ion (ortholog); ASSOCIATED WITH adenoma (ortholog); amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 1 165546619 165585164 - 22301074;30032202 116907578 MODEL JAAIVD010000025;XM_032910617;XM_032910625;XM_032910633 XP_032766508;XP_032766516;XP_032766524 thioredoxin reductase 1, cytoplasmic protein-coding 626132394 LOC116891521 eukaryotic translation initiation factor 3 subunit C 2 75356272 75373970 + 22301074;30032202 116891521 MODEL JAAIVD010000001;XM_032892659 XP_032748550 protein-coding 626132418 LOC116897485 small nucleolar RNA SNORA70 3 49815516 49815645 - 116897485 MODEL JAAIVD010000012 pseudo 626132419 LOC116889492 small nucleolar RNA SNORA48 X 92592591 92592733 + 116889492 MODEL JAAIVD010000014;XR_004386442 snorna 626132422 LOC116899775 U6 spliceosomal RNA 4 82694943 82695047 - 116899775 MODEL JAAIVD010000003;XR_004387788 snrna 626132425 LOC116889410 stabilizer of axonemal microtubules 1-like X 30624638 30626386 - 22301074;30032202 116889410 MODEL JAAIVD010000014;XM_032890513 XP_032746404 protein-coding 626132429 LOC116888197 60S ribosomal protein L10-like X 126068067 126068709 + 116888197 MODEL JAAIVD010000014 pseudo 626132430 Taf3 TATA-box binding protein associated factor 3 ENCODES a protein that exhibits histone H3K4me3 reader activity (ortholog); p53 binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN maintenance of protein location in nucleus (ortholog); mRNA transcription by RNA polymerase II (ortholog); negative regulation of signal transduction by p53 class mediator (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; FOUND IN male germ cell nucleus (ortholog); nuclear membrane (ortholog); nucleoplasm (ortholog) 14 15950226 16144214 - 22301074;30032202 116883946 MODEL JAAIVD010000009;XM_032885198 XP_032741089 transcription initiation factor TFIID subunit 3 protein-coding 626132440 LOC116889450 U6 spliceosomal RNA X 28916049 28916160 + 116889450 MODEL JAAIVD010000014;XR_004386408 snrna 626132443 Tk2 thymidine kinase 2 ENCODES a protein that exhibits deoxycytidine kinase activity (ortholog); thymidine kinase activity (ortholog); INVOLVED IN deoxycytidine metabolic process (ortholog); deoxyribonucleotide metabolic process (ortholog); mitochondrial DNA metabolic process (ortholog); ASSOCIATED WITH autosomal recessive progressive external ophthalmoplegia with mitochondrial DNA deletions 3 (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 17 12523485 12545680 - 22301074;30032202 116886228 MODEL JAAIVD010000011;XM_032887620 XP_032743511 thymidine kinase 2, mitochondrial protein-coding 626132457 LOC116901713 60S ribosomal protein L35a-like 5 83797088 83797419 + 116901713 MODEL JAAIVD010000023 pseudo 626132458 LOC116900783 seminal vesicle secretory protein 5 5 153661039 153662635 - 30032202 116900783 MODEL JAAIVD010000023;XM_032902493 XP_032758384 protein-coding 626132465 Jmjd8 jumonji domain containing 8 INVOLVED IN cellular respiration (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); positive regulation of sprouting angiogenesis (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog) 9 3094368 3097284 + 30032202 116908690 MODEL JAAIVD010000002;XM_032912004;XM_032912005 XP_032767895;XP_032767896 jmjC domain-containing protein 8 protein-coding 626132482 LOC116913576 olfactory receptor 1537-like 12 357324 358240 - 116913576 MODEL JAAIVD010000007 pseudo 626132483 Parp4 poly(ADP-ribose) polymerase family member 4 ENCODES a protein that exhibits enzyme binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN inflammatory response (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Colonic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 12 68188401 68264162 - 22301074;30032202 116913094 MODEL JAAIVD010000007;XM_032917228 XP_032773119 protein mono-ADP-ribosyltransferase PARP4 protein-coding 626132518 Svil supervillin ENCODES a protein that exhibits actin filament binding (ortholog); INVOLVED IN muscle cell differentiation (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); myofibrillar myopathy 10 (ortholog); FOUND IN actin cytoskeleton (ortholog); cell periphery (ortholog); costamere (ortholog) 14 31306651 31438990 + 22301074;30032202 116883409 MODEL JAAIVD010000009;XM_032884534 XP_032740425 protein-coding 626132560 LOC116889615 transcription factor E2F6-like Y 1830846 1831584 + 116889615 MODEL JAAIVD010000015 pseudo 626132561 LOC116898873 uncharacterized LOC116898873 4 30010750 30012553 + 116898873 MODEL JAAIVD010000003;XR_004387670 ncrna 626132565 Cimap1c ciliary microtubule associated protein 1C 8 50755119 50758164 - 30032202 116907859 MODEL JAAIVD010000027;XM_032911049 XP_032766940 Odf3l1 outer dense fiber of sperm tails 3 like 1;outer dense fiber protein 3-like protein 1 protein-coding 626132573 LOC116897539 small nucleolar RNA SNORA17 3 66305627 66305760 + 116897539 MODEL JAAIVD010000012;XR_004387553 snorna 626132576 Cimip1 ciliary microtubule inner protein 1 FOUND IN cilium (ortholog) 5 144449386 144457196 - 116900747 MODEL JAAIVD010000023;XM_032902453 XP_032758344 C5H20orf85 chromosome 5 C20orf85 homolog;uncharacterized protein C20orf85 homolog protein-coding 626132584 Pex19 peroxisomal biogenesis factor 19 ENCODES a protein that exhibits ATPase binding (ortholog); peroxisome membrane class-1 targeting sequence binding (ortholog); protein carrier chaperone (ortholog); INVOLVED IN establishment of protein localization to peroxisome (ortholog); peroxisome fission (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); peroxisomal biogenesis disorder (ortholog); FOUND IN brush border membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 51245736 51260707 + 22301074;30032202 116910999 MODEL JAAIVD010000005;XM_032914717;XR_004389292;Y09049 CAA70258;XP_032770608 protein-coding 626132600 F3 coagulation factor III, tissue factor ENCODES a protein that exhibits phospholipid binding (ortholog); protease binding (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN activation of blood coagulation via clotting cascade (ortholog); activation of plasma proteins involved in acute inflammatory response (ortholog); blood coagulation (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular matrix (ortholog) 3 38119982 38131423 - 22301074 116896307 MODEL JAAIVD010000012;XM_032897394 XP_032753285 tissue factor protein-coding 626132610 LOC116898553 ATP-dependent DNA helicase DDX11-like 4 154771286 154773467 - 22301074;30032202 116898553 MODEL JAAIVD010000003;XM_032899764 XP_032755655 protein-coding 626132614 Ebf3 EBF transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Ataxia (ortholog); autism spectrum disorder (ortholog); Developmental Disabilities (ortholog); FOUND IN nucleus (ortholog) 2 64636210 64753745 + 30032202 116891377 MODEL JAAIVD010000001;XM_032892379;XM_032892380;XM_032892381;XM_032892382;XM_032892383;XM_032892384;XM_032892385;XM_032892386;XM_032892387;XM_032892388 XP_032748270;XP_032748271;XP_032748272;XP_032748273;XP_032748274;XP_032748275;XP_032748276;XP_032748277;XP_032748278;XP_032748279 transcription factor COE3 protein-coding 626132648 Dcun1d4 defective in cullin neddylation 1 domain containing 4 ENCODES a protein that exhibits cullin family protein binding (ortholog); INVOLVED IN positive regulation of protein neddylation (ortholog); FOUND IN nucleus (ortholog) 11 30282127 30351809 + 30032202 116912877 MODEL JAAIVD010000006;XM_032917113;XM_032917114;XM_032917115;XR_004389485 XP_032773004;XP_032773005;XP_032773006 DCN1-like protein 4 protein-coding 626132669 Alg8 ALG8 alpha-1,3-glucosyltransferase ENCODES a protein that exhibits dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity (ortholog); INVOLVED IN dolichol-linked oligosaccharide biosynthetic process (ortholog); protein N-linked glycosylation (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation Ih (ortholog); cystic kidney disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 95692694 95712596 + 30032202 116891694 MODEL JAAIVD010000001;XM_032892960 XP_032748851 probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase protein-coding 626132686 Gatd3 glutamine amidotransferase class 1 domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); FOUND IN mitochondrion (ortholog) 18 1442318 1450687 - 30032202 116887205 MODEL JAAIVD010000013;XM_032888762 XP_032744653 Gatd3a glutamine amidotransferase class 1 domain containing 3A;glutamine amidotransferase like class 1 domain containing 3A;glutamine amidotransferase-like class 1 domain-containing protein 3A, mitochondrial protein-coding 626132697 Spa17 sperm autoantigenic protein 17 ASSOCIATED WITH Merkel cell carcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) 8 33762800 33773987 - 22301074;30032202 116907797 MODEL JAAIVD010000027;XM_032910943 XP_032766834 sperm surface protein Sp17 protein-coding 626132706 C10H1orf116 chromosome 10 C1orf116 homolog FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 10 5072503 5079958 - 116911437 MODEL JAAIVD010000005;XM_032915406 XP_032771297 specifically androgen-regulated gene protein protein-coding 626132713 Slc35g1 solute carrier family 35 member G1 INVOLVED IN calcium ion export across plasma membrane (ortholog); regulation of cytosolic calcium ion concentration (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 2 35367138 35375939 - 30032202 116891120 MODEL JAAIVD010000001;XM_032891835 XP_032747726 protein-coding 626132720 Vipr2 vasoactive intestinal peptide receptor 2 ENCODES a protein that exhibits pituitary adenylate cyclase-activating polypeptide receptor activity (ortholog); vasoactive intestinal polypeptide receptor activity (ortholog); INVOLVED IN activation of adenylate cyclase activity (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); ASSOCIATED WITH colitis (ortholog); myoepithelioma (ortholog); schizophrenia (ortholog); FOUND IN plasma membrane (ortholog) 7 120256996 120322230 - 22301074;30032202 116905417 MODEL JAAIVD010000026;XM_032908373 XP_032764264 vasoactive intestinal polypeptide receptor 2 protein-coding 626132737 Rfx2 regulatory factor X2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN acrosome assembly (ortholog); cellular response to leukemia inhibitory factor (ortholog); cilium assembly (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 88146741 88212510 - 22301074;30032202 116899197 MODEL JAAIVD010000003;XM_032900782;XM_032900783;XR_004387696 XP_032756673;XP_032756674 DNA-binding protein RFX2 protein-coding 626132763 Sycp3 synaptonemal complex protein 3 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); chiasma assembly (ortholog); female meiosis chromosome segregation (ortholog); ASSOCIATED WITH azoospermia (ortholog); Habitual Abortions (ortholog); male infertility (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 1 167538791 167549316 + 30032202 116907794 MODEL JAAIVD010000025;XM_032910940 XP_032766831 protein-coding 626132774 Adrm1 ADRM1 26S proteasome ubiquitin receptor ENCODES a protein that exhibits endopeptidase activator activity (ortholog); molecular function inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN adipose tissue development (ortholog); follicle-stimulating hormone signaling pathway (ortholog); oogenesis (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 5 157254182 157258883 + 30032202 116902404 MODEL JAAIVD010000023;XM_032904934 XP_032760825 adhesion regulating molecule 1;proteasomal ubiquitin receptor ADRM1 protein-coding 626132787 LOC116887646 60S ribosomal protein L5-like 18 18263102 18263552 + 116887646 MODEL JAAIVD010000013 pseudo 626132788 LOC116900546 olfactory receptor 4F21-like 5 89751908 89752843 + 22301074 116900546 MODEL JAAIVD010000023;XM_032902273 XP_032758164 protein-coding 626132791 LOC116909618 ankyrin repeat domain-containing protein 20B-like 9 7579112 7698075 - 22301074 116909618 MODEL JAAIVD010000002;XM_032913244;XM_032913245 XP_032769135;XP_032769136 ankyrin repeat domain-containing protein 26-like protein-coding 626132811 Ccr7 C-C motif chemokine receptor 7 ENCODES a protein that exhibits C-C chemokine receptor activity (ortholog); C-C motif chemokine 19 receptor activity (ortholog); C-C motif chemokine 21 receptor activity (ortholog); INVOLVED IN CCL19-activated CCR7 signaling pathway (ortholog); CCL21-activated CCR7 signaling pathway (ortholog); cellular response to cytokine stimulus (ortholog); ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); aspergillosis (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); mitochondrion (ortholog) 9 55287719 55298806 + 22301074;30032202 116908893 MODEL JAAIVD010000002;XM_032912342 XP_032768233 C-C chemokine receptor type 7 protein-coding 626132818 Rp9 RP9 pre-mRNA splicing factor INVOLVED IN cognition (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); retinitis pigmentosa (ortholog); FOUND IN signal recognition particle receptor complex (ortholog) 8 18659746 18690260 - 30032202 116908314 MODEL JAAIVD010000027;XM_032911601;XM_032911602 XP_032767492;XP_032767493 retinitis pigmentosa 9 protein protein-coding 626132831 Rasa3 RAS p21 protein activator 3 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); INVOLVED IN cellular response to heat (ortholog); platelet activation (ortholog); ASSOCIATED WITH aplastic anemia (ortholog); Dwarfism (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) 13 70022626 70139053 + 22301074 116914439 MODEL JAAIVD010000008;XM_032918738 XP_032774629 ras GTPase-activating protein 3 protein-coding 626132859 Cnih1 cornichon family member 1 12 76265130 76276943 + 22301074 116913579 MODEL JAAIVD010000007;XM_032917798;XM_032917800 XP_032773689;XP_032773691 cornichon family AMPA receptor auxiliary protein 1;protein cornichon homolog 1 protein-coding 626132872 Ranbp9 RAN binding protein 9 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 14 62409888 62487602 - 22301074;30032202 116883638 MODEL JAAIVD010000009;XM_032884826 XP_032740717 ran-binding protein 9 protein-coding 626132890 LOC116893562 40S ribosomal protein S13-like 2 216806918 216813670 - 116893562 MODEL JAAIVD010000001 pseudo 626132891 B3galt1 beta-1,3-galactosyltransferase 1 ENCODES a protein that exhibits N-acetyl-beta-D-glucosaminide beta-(1,3)-galactosyltransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); obsolete lipid glycosylation (ortholog); oligosaccharide biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN Golgi membrane (ortholog) 5 45436650 45482059 + 22301074;30032202 116901473 MODEL JAAIVD010000023;XM_032903421 XP_032759312 protein-coding 626132897 LOC116907864 ubiquitin-conjugating enzyme E2 variant 1-like 8 546886 549067 + 116907864 MODEL JAAIVD010000027 pseudo 626132898 LOC116889568 U6 spliceosomal RNA X 65070193 65070299 + 116889568 MODEL JAAIVD010000014;XR_004386485 snrna 626132901 LOC116890324 U6 spliceosomal RNA 1 62707920 62708026 + 116890324 MODEL JAAIVD010000025;XR_004386547 snrna 626132904 LOC116895301 40S ribosomal protein S25-like 3 20888406 20888843 - 116895301 MODEL JAAIVD010000012 pseudo 626132905 Ap4b1 adaptor related protein complex 4 subunit beta 1 INVOLVED IN protein localization to somatodendritic compartment (ortholog); protein targeting (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 47 (ortholog); FOUND IN AP-4 adaptor complex (ortholog); cytoplasmic side of trans-Golgi network transport vesicle membrane (ortholog); cytosol (ortholog) 3 54251153 54262282 - 22301074;30032202 116896443 MODEL JAAIVD010000012;XM_032897596 XP_032753487 AP-4 complex subunit beta-1 protein-coding 626132920 Helz helicase with zinc finger ASSOCIATED WITH pervasive developmental disorder (ortholog) 9 71442029 71580255 - 22301074;30032202 116910098 MODEL JAAIVD010000002;XM_032913921;XM_032913923;XM_032913924;XM_032913925 XP_032769812;XP_032769814;XP_032769815;XP_032769816 probable helicase with zinc finger domain protein-coding 626132965 Bysl bystin like INVOLVED IN blastocyst formation (ortholog); cellular response to forskolin (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Brain Injuries (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); chromosome (ortholog) 4 82267139 82277197 + 30032202 116899079 MODEL JAAIVD010000003;XM_032900580 XP_032756471 bystin protein-coding 626132976 LOC116891297 acylcarnitine hydrolase-like 2 54864636 54872193 - 30032202 116891297 MODEL JAAIVD010000001;XM_032892207 XP_032748098 protein-coding 626132992 Wasf1 WASP family member 1 ENCODES a protein that exhibits protein kinase A binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to brain-derived neurotrophic factor stimulus (ortholog); dendrite extension (ortholog); ASSOCIATED WITH COVID-19 (ortholog); generalized epilepsy (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); lamellipodium (ortholog); mitochondrial outer membrane (ortholog) 18 40631033 40681879 + 22301074;30032202 116887547 MODEL JAAIVD010000013;XM_032889178 XP_032745069 wiskott-Aldrich syndrome protein family member 1 protein-coding 626133005 LOC116895074 small nucleolar RNA SNORA40 2 133985518 133985643 - 116895074 MODEL JAAIVD010000001;XR_004387243 snorna 626133008 Cisd2 CDGSH iron sulfur domain 2 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN autophagy of mitochondrion (ortholog); regulation of autophagy (ortholog); ASSOCIATED WITH genetic disease (ortholog); type 2 diabetes mellitus (ortholog); Wolfram syndrome 2 (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); mitochondrial outer membrane (ortholog) 3 23664731 23683523 + 22301074;30032202 116896226 MODEL JAAIVD010000012;XM_032897282 XP_032753173 CDGSH iron-sulfur domain-containing protein 2 protein-coding 626133015 Pisd phosphatidylserine decarboxylase ENCODES a protein that exhibits phosphatidylserine decarboxylase activity (ortholog); INVOLVED IN lipid droplet formation (ortholog); mitochondrial protein catabolic process (ortholog); phosphatidylethanolamine biosynthetic process (ortholog); PARTICIPATES IN forkhead class A signaling pathway; glycerophospholipid metabolic pathway; ASSOCIATED WITH Childhood Schizophrenia (ortholog); genetic disease (ortholog); Liberfarb Syndrome (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); lipid droplet (ortholog) 11 72058836 72108446 + 22301074;30032202 116912067 MODEL JAAIVD010000006;XM_032915928;XM_032915929;XM_032915930;XM_032915931 XP_032771819;XP_032771820;XP_032771821;XP_032771822 phosphatidylserine decarboxylase proenzyme, mitochondrial protein-coding 626133036 Cdc20 cell division cycle 20 ENCODES a protein that exhibits anaphase-promoting complex binding (ortholog); histone deacetylase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anaphase-promoting complex-dependent catabolic process (ortholog); G2/M transition of mitotic cell cycle (ortholog); metaphase/anaphase transition of cell cycle (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 14 (ortholog); FOUND IN anaphase-promoting complex (ortholog); centrosome (ortholog); cytosol (ortholog) 1 38590980 38595281 + 22301074;30032202 116897789 MODEL JAAIVD010000025;XM_032899213 XP_032755104 cell division cycle protein 20 homolog protein-coding 626133050 Zranb1 zinc finger RANBP2-type containing 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cell migration (ortholog); cytoskeleton organization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 68859945 68914302 - 30032202 116891390 MODEL JAAIVD010000001;XM_032892408;XM_032892409 XP_032748299;XP_032748300 ubiquitin thioesterase ZRANB1 protein-coding 626133067 LOC116902686 ribosome biogenesis protein NSA2 homolog 6 39786039 39786821 + 116902686 MODEL JAAIVD010000024 pseudo 626133068 LOC116897505 small nucleolar RNA SNORA25 3 198067138 198067277 + 116897505 MODEL JAAIVD010000012;XR_004387525 snorna 626133071 Mrpl21 mitochondrial ribosomal protein L21 FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 4363854 4372341 - 22301074;30032202 116890812 MODEL JAAIVD010000001;XM_032891309 XP_032747200 39S ribosomal protein L21, mitochondrial protein-coding 626133082 Hck HCK proto-oncogene, Src family tyrosine kinase ENCODES a protein that exhibits lipid binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN defense response to Gram-positive bacterium (ortholog); intracellular signal transduction (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; glypican signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); autoimmune disease (ortholog); Autoinflammation with Pulmonary and Cutaneous Vasculitis (ortholog); FOUND IN actin filament (ortholog); caveola (ortholog); cytoplasmic side of plasma membrane (ortholog) 5 132423321 132466792 + 22301074;30032202 116902136 MODEL JAAIVD010000023;X62345;XM_032904463 CAA44218;XP_032760354 protein-tyrosine kinase;tyrosine-protein kinase HCK protein-coding 626133099 LOC116894695 60S ribosomal protein L27a-like 2 216674176 216674573 + 116894695 MODEL JAAIVD010000001 pseudo 626133100 Parp10 poly(ADP-ribose) polymerase family member 10 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); INVOLVED IN chromatin organization (ortholog); negative regulation of fibroblast proliferation (ortholog); negative regulation of gene expression (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; ASSOCIATED WITH Developmental Disabilities (ortholog); epidermolysis bullosa simplex with muscular dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 1 248561021 248570559 - 22301074;30032202 116912966 MODEL JAAIVD010000025;XM_032917180 XP_032773071 protein mono-ADP-ribosyltransferase PARP10 protein-coding 626133114 LOC116886439 chloride channel protein ClC-Ka 1 16745180 16760060 + 22301074;30032202 116886439 MODEL JAAIVD010000025;XM_032887932;XM_032887942;XM_032887949;XM_032887957 XP_032743823;XP_032743833;XP_032743840;XP_032743848 protein-coding 626133146 Dctn3 dynactin subunit 3 INVOLVED IN cytoskeleton-dependent cytokinesis (ortholog); microtubule-based process (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); dynactin complex (ortholog) 1 3828023 3836184 + 22301074;30032202 116891313 MODEL JAAIVD010000025;XM_032892232 XP_032748123 protein-coding 626133157 LOC116886221 activated RNA polymerase II transcriptional coactivator p15-like 1 13986798 13987346 - 22301074;30032202 116886221 MODEL JAAIVD010000025;XM_032887616 XP_032743507 protein-coding 626133161 Lmo3 LIM domain only 3 INVOLVED IN exploration behavior (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of fat cell differentiation (ortholog); FOUND IN cytoplasm (ortholog) 6 11057123 11119615 + 30032202 116903139 MODEL JAAIVD010000024;XM_032905498;XM_032905499;XM_032905500;XM_032905501;XM_032905502;XM_032905503;XM_032905504;XM_032905505 XP_032761389;XP_032761390;XP_032761391;XP_032761392;XP_032761393;XP_032761394;XP_032761395;XP_032761396 LIM domain only protein 3 protein-coding 626133190 Spint3 serine peptidase inhibitor, Kunitz type 3 ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog) 5 153399473 153402053 + 22301074;30032202 116902357 MODEL JAAIVD010000023;XM_032904845 XP_032760736 kunitz-type protease inhibitor 3 protein-coding 626133195 LOC116905311 uncharacterized LOC116905311 7 100977036 100988316 + 116905311 MODEL JAAIVD010000026;XR_004388514;XR_004388515;XR_004388516 ncrna 626133205 Exoc8 exocyst complex component 8 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome organization (ortholog); exocytosis (ortholog); extracellular matrix disassembly (ortholog); ASSOCIATED WITH Joubert syndrome (ortholog); NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, SEIZURES, AND BRAIN ATROPHY (ortholog); FOUND IN cell leading edge (ortholog); exocyst (ortholog); late endosome (ortholog) 17 44406120 44410520 - 30032202 116886073 MODEL JAAIVD010000011;XM_032887387 XP_032743278 protein-coding 626133210 Cactin cactin, spliceosome C complex subunit INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); nuclear speck (ortholog) 1 153564878 153570371 - 22301074;30032202 116904403 MODEL JAAIVD010000025;XM_032907257;XM_032907258 XP_032763148;XP_032763149 protein-coding 626133227 Foxred1 FAD dependent oxidoreductase domain containing 1 INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy type 2A (ortholog); Developmental Disabilities (ortholog); epilepsy (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 8 30755875 30763176 - 22301074;30032202 116907786 MODEL JAAIVD010000027;XM_032910927;XM_032910928;XM_032910930 XP_032766818;XP_032766819;XP_032766821 FAD-dependent oxidoreductase domain-containing protein 1 protein-coding 626133249 Arl5a ARF like GTPase 5A INVOLVED IN protein localization to Golgi membrane (ortholog) 5 30176889 30202103 - 22301074;30032202 116901404 MODEL JAAIVD010000023;XM_032903280 XP_032759171 ADP ribosylation factor like GTPase 5A;ADP-ribosylation factor-like protein 5A protein-coding 626133259 LOC116914183 U6 spliceosomal RNA 12 67829302 67829394 + 116914183 MODEL JAAIVD010000007 pseudo 626133260 Cspg5 chondroitin sulfate proteoglycan 5 INVOLVED IN axon regeneration (ortholog); cytoskeleton organization (ortholog); glial cell projection elongation (ortholog); FOUND IN GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog); Golgi apparatus (ortholog) 8 100839146 100853979 + 30032202 116907659 MODEL JAAIVD010000027;XM_032910750;XM_032910751 XP_032766641;XP_032766642 protein-coding 626133273 LOC116883940 uncharacterized LOC116883940 14 12655163 12662521 - 116883940 MODEL JAAIVD010000009;XM_032885189 XP_032741080 uncharacterized protein LOC116883940 protein-coding 626133277 LOC116902556 small nucleolar RNA SNORA48 5 42235426 42235568 - 116902556 MODEL JAAIVD010000023;XR_004388155 snorna 626133280 LOC116906393 ragulator complex protein LAMTOR2-like 1 156212861 156213627 - 30032202 116906393 MODEL JAAIVD010000025;XM_032909217 XP_032765108 protein-coding 626133285 LOC116910283 retinol dehydrogenase 16 1 206214830 206222155 + 22301074 116910283 MODEL JAAIVD010000025;XM_032914158 XP_032770049 protein-coding 626133292 LOC116894904 collagen alpha-1(I) chain-like 1 24171432 24180110 - 116894904 MODEL JAAIVD010000025;XM_032896502 XP_032752393 protein-coding 626133299 Hhat hedgehog acyltransferase ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN N-terminal peptidyl-L-cysteine N-palmitoylation (ortholog); smoothened signaling pathway (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH chondrodysplasia-pseudohermaphroditism syndrome (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 10 70514330 70740050 - 30032202 116911517 MODEL JAAIVD010000005;XM_032915511 XP_032771402 protein-cysteine N-palmitoyltransferase HHAT protein-coding 626133314 LOC116909754 olfactory receptor 4D1 9 82890100 82891041 + 22301074 116909754 MODEL JAAIVD010000002;XM_032913440 XP_032769331 protein-coding 626133317 Tmem161a transmembrane protein 161A INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to UV (ortholog); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (ortholog) 13 12440316 12450458 + 116914683 MODEL JAAIVD010000008;XM_032919097;XM_032919098;XM_032919099;XM_032919100 XP_032774988;XP_032774989;XP_032774990;XP_032774991 protein-coding 626133340 Slfn14 schlafen family member 14 ENCODES a protein that exhibits ribosome binding (ortholog); RNA endonuclease activity (ortholog); INVOLVED IN mRNA catabolic process (ortholog); platelet maturation (ortholog); rRNA catabolic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); platelet-type bleeding disorder 20 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 87398983 87406890 + 30032202 116908605 MODEL JAAIVD010000002;XM_032911828 XP_032767719 protein SLFN14 protein-coding 626133347 LOC116913047 U6 spliceosomal RNA 11 82642334 82642438 - 116913047 MODEL JAAIVD010000006;XR_004389582 snrna 626133350 LOC116893919 60 kDa heat shock protein, mitochondrial-like 2 81336103 81337978 + 116893919 MODEL JAAIVD010000001 pseudo 626133351 Klc4 kinesin light chain 4 ASSOCIATED WITH NEURODEGENERATION, EARLY-CHILDHOOD-ONSET, WITH RETINITIS PIGMENTOSA, SENSORINEURAL HEARING LOSS, AND DEMYELINATING PERIPHERAL NEUROPATHY (ortholog) 4 83217898 83231467 + 22301074;30032202 116899103 MODEL JAAIVD010000003;XM_032900618;XM_032900619 XP_032756509;XP_032756510 protein-coding 626133375 Cpa2 carboxypeptidase A2 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); metallocarboxypeptidase activity (ortholog); zinc ion binding (ortholog); ASSOCIATED WITH Hypoxia (ortholog); FOUND IN extracellular region (ortholog) 6 108997115 109019995 - 22301074;30032202 116902909 MODEL JAAIVD010000024;XM_032905236 XP_032761127 protein-coding 626133390 LOC116912874 40S ribosomal protein S11-like 11 62958328 62958804 + 22301074;30032202 116912874 MODEL JAAIVD010000006;XM_032917105 XP_032772996 protein-coding 626133393 LOC116904522 solute carrier organic anion transporter family member 1A3 6 7525288 7564650 - 22301074;30032202 116904522 MODEL JAAIVD010000024;XM_032907304;XM_032907305;XM_032907306;XM_032907308;XM_032907309;XM_032907310;XM_032907311;XM_032907312 XP_032763195;XP_032763196;XP_032763197;XP_032763199;XP_032763200;XP_032763201;XP_032763202;XP_032763203 protein-coding 626133429 Zcchc12 zinc finger CCHC-type containing 12 ENCODES a protein that exhibits SUMO binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN BMP signaling pathway (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); FOUND IN nuclear speck (ortholog); nucleus (ortholog); PML body (ortholog) X 102383485 102386532 + 22301074;30032202 116888800 MODEL JAAIVD010000014;XM_032890082 XP_032745973 zinc finger CCHC domain-containing protein 12 protein-coding 626133437 LOC116899334 uncharacterized LOC116899334 4 118512983 118537598 + 116899334 MODEL JAAIVD010000003;XR_004387707;XR_004387708 ncrna 626133446 LOC116889902 olfactory receptor 6C1 1 160160882 160161826 - 22301074;30032202 116889902 MODEL JAAIVD010000025;XM_032890725 XP_032746616 protein-coding 626133449 LOC116894218 olfactory receptor 502-like 2 106605067 106606011 - 22301074;30032202 116894218 MODEL JAAIVD010000001;XM_032895930 XP_032751821 protein-coding 626133452 Erich5 glutamate rich 5 1 208149445 208170552 + 116890050 MODEL JAAIVD010000025;XM_032890818 XP_032746709 glutamate-rich protein 5 protein-coding 626133459 LOC116894051 olfactory receptor 51G2-like 2 102670360 102671322 - 22301074 116894051 MODEL JAAIVD010000001;XM_032895772 XP_032751663 protein-coding 626133462 LOC116900162 uncharacterized protein C1orf43 homolog 5 27901770 27902705 - 116900162 MODEL JAAIVD010000023 pseudo 626133463 LOC116895781 oviduct-specific glycoprotein-like 3 52138426 52157315 - 116895781 MODEL JAAIVD010000012 pseudo 626133464 LOC116912543 ubiquitin-associated protein 2-like 11 1553978 1557641 + 22301074;30032202 116912543 MODEL JAAIVD010000006;XM_032916645 XP_032772536 protein-coding 626133469 LOC116883535 putative elongation factor 1-alpha-like 3 14 74514801 74516113 + 116883535 MODEL JAAIVD010000009 pseudo 626133470 LOC116890402 U6 spliceosomal RNA 1 30995913 30996015 + 116890402 MODEL JAAIVD010000025;XR_004386604 snrna 626133473 LOC116911882 U6 spliceosomal RNA 10 3320523 3320629 + 116911882 MODEL JAAIVD010000005;XR_004389396 snrna 626133476 LOC116909390 60S ribosomal protein L36-like 9 71973101 71973490 - 22301074;30032202 116909390 MODEL JAAIVD010000002;XM_032912951 XP_032768842 protein-coding 626133481 LOC116888117 cancer/testis antigen 47A-like X 102582108 102584600 + 116888117 MODEL JAAIVD010000014;XM_032889471 XP_032745362 protein-coding 626133486 Dph1 diphthamide biosynthesis 1 ENCODES a protein that exhibits 2-(3-amino-3-carboxypropyl)histidine synthase activity (ortholog); INVOLVED IN fibroblast proliferation (ortholog); protein histidyl modification to diphthamide (ortholog); ASSOCIATED WITH congenital disorder of glycosylation Ia (ortholog); Dandy-Walker syndrome (ortholog); diphthamide deficiency syndrome (ortholog); FOUND IN 2-(3-amino-3-carboxypropyl)histidine synthase complex (ortholog); cell junction (ortholog); nucleoplasm (ortholog) 9 93901123 93912842 - 22301074;30032202 116910547 MODEL JAAIVD010000002;XM_032914454 XP_032770345 2-(3-amino-3-carboxypropyl)histidine synthase subunit 1 protein-coding 626133503 Nrros negative regulator of reactive oxygen species ENCODES a protein that exhibits receptor ligand inhibitor activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN immune response (ortholog); inflammatory response (ortholog); innate immune response (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); SEIZURES, EARLY-ONSET, WITH NEURODEGENERATION AND BRAIN CALCIFICATIONS (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog) 4 16962925 16980214 - 22301074 116898766 MODEL JAAIVD010000003;XM_032900099 XP_032755990 transforming growth factor beta activator LRRC33 protein-coding 626133510 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92749570 92749641 - 116904854 MODEL JAAIVD010000024 trna 626133511 Wdr17 WD repeat domain 17 ASSOCIATED WITH Liver Neoplasms (ortholog) 13 33847101 33940687 - 22301074 116914473 MODEL JAAIVD010000008;XM_032918773 XP_032774664 WD repeat-containing protein 17 protein-coding 626133545 LOC116888063 solute carrier family 25 member 39-like X 88733776 88734613 - 116888063 MODEL JAAIVD010000014 pseudo 626133546 Mrps16 mitochondrial ribosomal protein S16 ASSOCIATED WITH combined oxidative phosphorylation deficiency 2 (ortholog); FOUND IN cytosol (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 12 90191787 90193914 - 22301074;30032202 116913327 MODEL JAAIVD010000007;XM_032917470 XP_032773361 28S ribosomal protein S16, mitochondrial protein-coding 626133553 LOC116912006 cytosolic beta-glucosidase 11 55700951 55797822 - 22301074;30032202 116912006 MODEL JAAIVD010000006;XM_032915904 XP_032771795 protein-coding 626133560 Ttl tubulin tyrosine ligase ENCODES a protein that exhibits tubulin-tyrosine ligase activity (ortholog); INVOLVED IN microtubule cytoskeleton organization (ortholog); positive regulation of mitotic cell cycle (ortholog); post-translational protein modification (ortholog); FOUND IN spindle microtubule (ortholog) 5 107838403 107863158 + 22301074 116901954 MODEL JAAIVD010000023;XM_032904190;XM_032904191 XP_032760081;XP_032760082 tubulin--tyrosine ligase protein-coding 626133573 Znf395 zinc finger protein 395 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 12 59037665 59076335 - 30032202 116913594 MODEL JAAIVD010000007;XM_032917840 XP_032773731 protein-coding 626133587 L3mbtl3 L3MBTL histone methyl-lysine binding protein 3 ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN erythrocyte maturation (ortholog); granulocyte differentiation (ortholog); macrophage differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); medulloblastoma (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 212300236 212400607 - 22301074 116892960 MODEL JAAIVD010000001;XM_032894911 XP_032750802 lethal(3)malignant brain tumor-like protein 3 protein-coding 626133613 LOC116889842 sensory transduction protein regX3-like 22301074;30032202 116889842 MODEL JAAIVD010001829;XM_032890675 XP_032746566 protein-coding 626133614 LOC116889829 transcription factor MafG 30032202 116889829 MODEL JAAIVD010001415;XM_032890664 XP_032746555 protein-coding 626133615 LOC116895956 voltage-dependent anion-selective channel protein 1-like 3 142139812 142162712 + 116895956 MODEL JAAIVD010000012 pseudo 626133616 LOC116887644 hsc70-interacting protein-like 18 17420359 17452584 + 116887644 MODEL JAAIVD010000013 pseudo 626133617 LOC116887342 olfactory receptor 10C1-like 18 10895778 10896746 - 22301074 116887342 MODEL JAAIVD010000013;XM_032888935;XM_032888936 XP_032744826;XP_032744827 olfactory receptor 10A5-like protein-coding 626133624 LOC116914789 uncharacterized LOC116914789 13 31096131 31117679 - 116914789 MODEL JAAIVD010000008;XR_004389770 ncrna 626133629 LOC116898760 zinc finger protein 557-like 1 99389807 99396399 + 22301074 116898760 MODEL JAAIVD010000025;XM_032900127 XP_032756018 protein-coding 626133637 LOC116905579 ATP synthase subunit g, mitochondrial-like 7 129568882 129575015 - 22301074;30032202 116905579 MODEL JAAIVD010000026;XM_032908591 XP_032764482 protein-coding 626133642 LOC116894631 60S ribosomal protein L19-like 2 193452140 193452749 - 116894631 MODEL JAAIVD010000001 pseudo 626133643 LOC116901084 60S ribosomal protein L18-like 5 150414091 150414692 - 116901084 MODEL JAAIVD010000023 pseudo 626133644 LOC116900274 olfactory receptor 5AL1-like 5 63381024 63381965 - 22301074;30032202 116900274 MODEL JAAIVD010000023;XM_032902026 XP_032757917 protein-coding 626133647 LOC116890025 swi5-dependent recombination DNA repair protein 1 homolog 1 195959355 195960365 + 116890025 MODEL JAAIVD010000025 pseudo 626133648 LOC116899478 keratin, type I cytoskeletal 18-like 1 50484441 50485727 - 116899478 MODEL JAAIVD010000025 pseudo 626133649 Ccdc158 coiled-coil domain containing 158 ENCODES a protein that exhibits clathrin binding (ortholog); INVOLVED IN receptor-mediated endocytosis (ortholog); FOUND IN clathrin-coated vesicle (ortholog); early endosome (ortholog) 11 5434099 5484310 - 116912564 MODEL JAAIVD010000006;XM_032916667 XP_032772558 coiled-coil domain-containing protein 158 protein-coding 626133676 Npy1r neuropeptide Y receptor Y1 ENCODES a protein that exhibits neuropeptide Y receptor activity (ortholog); pancreatic polypeptide receptor activity (ortholog); peptide YY receptor activity (ortholog); INVOLVED IN feeding behavior (ortholog); glucose metabolic process (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH absence epilepsy (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); neuronal dense core vesicle (ortholog) 13 22588233 22591920 - 22301074;30032202 116914777 MODEL JAAIVD010000008;XM_032919226;Z11504 CAA77579;XP_032775117 neuropeptide Y receptor type 1 protein-coding 626133682 Nipal1 NIPA like domain containing 1 INVOLVED IN magnesium ion transport (ortholog); FOUND IN Golgi apparatus (ortholog) 11 29460845 29484509 + 22301074;30032202 116912512 MODEL JAAIVD010000006;XM_032916599 XP_032772490 magnesium transporter NIPA3 protein-coding 626133692 LOC116889003 uncharacterized LOC116889003 X 14156080 14157327 + 116889003 MODEL JAAIVD010000014 pseudo 626133693 Popdc2 popeye domain cAMP effector 2 ENCODES a protein that exhibits cAMP binding (ortholog); INVOLVED IN regulation of heart rate (ortholog); regulation of membrane potential (ortholog); sinoatrial node cell development (ortholog); FOUND IN membrane (ortholog); sarcolemma (ortholog) 4 23311864 23328066 + 30032202 116898841 MODEL JAAIVD010000003;XM_032900195;XM_032900196;XR_004387667 XP_032756086;XP_032756087 popeye domain containing 2;popeye domain-containing protein 2 protein-coding 626133709 Fam228b family with sequence similarity 228 member B ASSOCIATED WITH essential tremor (ortholog) 7 25392193 25423844 - 116906282 MODEL JAAIVD010000026;XM_032909167;XM_032909168;XM_032909169;XM_032909170;XM_032909171 XP_032765058;XP_032765059;XP_032765060;XP_032765061;XP_032765062 protein FAM228B protein-coding 626133732 LOC116900631 heterogeneous nuclear ribonucleoprotein L-like 5 109722641 109724460 + 116900631 MODEL JAAIVD010000023 pseudo 626133733 LOC116893581 rRNA 2'-O-methyltransferase fibrillarin-like 2 228536734 228537667 + 116893581 MODEL JAAIVD010000001 pseudo 626133734 Alkbh2 alkB homolog 2, alpha-ketoglutarate dependent dioxygenase ENCODES a protein that exhibits 2-oxoglutarate-dependent dioxygenase activity (ortholog); broad specificity oxidative DNA demethylase activity (ortholog); cytosine C-5 DNA demethylase activity (ortholog); INVOLVED IN DNA alkylation repair (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 16 39840337 39844874 + 30032202 116885744 MODEL JAAIVD010000004;XM_032887052 XP_032742943 DNA oxidative demethylase ALKBH2 protein-coding 626133741 LOC116901750 proteasome subunit beta type-3-like 5 90905502 90906112 - 116901750 MODEL JAAIVD010000023 pseudo 626133742 Cul7 cullin 7 ENCODES a protein that exhibits ubiquitin ligase complex scaffold activity (ortholog); INVOLVED IN epithelial to mesenchymal transition (ortholog); Golgi organization (ortholog); insulin receptor signaling pathway (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH 3-M syndrome (ortholog); autistic disorder (ortholog); Dwarfism (ortholog); FOUND IN 3M complex (ortholog); centrosome (ortholog); Cul7-RING ubiquitin ligase complex (ortholog) 4 83199660 83213559 - 22301074;30032202 116899104 MODEL JAAIVD010000003;XM_032900620 XP_032756511 cullin-7 protein-coding 626133772 LOC116887249 olfactory receptor 2G3-like 18 10908178 10909131 + 22301074 116887249 MODEL JAAIVD010000013;XM_032888816 XP_032744707 protein-coding 626133775 LOC116907296 protein crumbs homolog 1-like 8 19859235 19860302 - 116907296 MODEL JAAIVD010000027 pseudo 626133776 LOC116903601 39S ribosomal protein L47, mitochondrial-like 6 66428990 66439997 - 116903601 MODEL JAAIVD010000024 pseudo 626133777 Ube2t ubiquitin conjugating enzyme E2 T ENCODES a protein that exhibits chromatin binding (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH Fanconi anemia complementation group T (ortholog); hepatocellular carcinoma (ortholog); Kidney Neoplasms (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 10 734815 740397 - 116911175 MODEL JAAIVD010000005;XM_032915038 XP_032770929 ubiquitin-conjugating enzyme E2 T protein-coding 626133787 LOC116889528 small nucleolar RNA SNORA17 X 69985738 69985856 - 116889528 MODEL JAAIVD010000014 pseudo 626133788 Lmbr1l limb development membrane protein 1 like ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN hematopoietic stem cell differentiation (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 1 271729344 271743827 - 30032202 116884889 MODEL JAAIVD010000025;XM_032886124;XM_032886127 XP_032742015;XP_032742018 protein LMBR1L protein-coding 626133812 LOC116896036 egl nine homolog 1-like 3 190340972 190342420 - 116896036 MODEL JAAIVD010000012 pseudo 626133813 LOC116913984 olfactory receptor 4K2 12 73011833 73012789 + 22301074 116913984 MODEL JAAIVD010000007;XM_032918261 XP_032774152 protein-coding 626133816 Rpap2 RNA polymerase II associated protein 2 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); RNA polymerase II CTD heptapeptide repeat phosphatase activity (ortholog); INVOLVED IN PERK-mediated unfolded protein response (ortholog); snRNA transcription (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 11 17356580 17426924 + 30032202 116912395 MODEL JAAIVD010000006;XM_032916456 XP_032772347 putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 protein-coding 626133833 LOC116883351 uncharacterized LOC116883351 14 69237123 69242598 + 116883351 MODEL JAAIVD010000009;XR_004385752 ncrna 626133838 LOC116906101 RNA-binding protein with serine-rich domain 1-like 7 74488204 74489259 + 116906101 MODEL JAAIVD010000026 pseudo 626133839 Cisd1 CDGSH iron sulfur domain 1 ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); identical protein binding (ortholog); L-cysteine transaminase activity (ortholog); INVOLVED IN protein maturation (ortholog); regulation of cellular respiration (ortholog); FOUND IN cytoplasmic side of mitochondrial outer membrane (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 18 15513893 15527286 + 22301074;30032202 116887161 MODEL JAAIVD010000013;XM_032888709 XP_032744600 CDGSH iron-sulfur domain-containing protein 1 protein-coding 626133846 LOC116895021 small nucleolar RNA SNORA17 2 21668190 21668319 - 116895021 MODEL JAAIVD010000001;XR_004387207 snorna 626133849 Tapt1 transmembrane anterior posterior transformation 1 INVOLVED IN embryonic skeletal system development (ortholog); positive regulation of cilium assembly (ortholog); ASSOCIATED WITH Dwarfism (ortholog); genetic disease (ortholog); OSTEOCHONDRODYSPLASIA, COMPLEX LETHAL, SYMOENS-BARNES-GISTELINCK TYPE (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 11 61560694 61605456 + 30032202 116912153 MODEL JAAIVD010000006;XM_032916071 XP_032771962 transmembrane anterior posterior transformation protein 1 homolog protein-coding 626133866 Anln anillin actin binding protein ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic cytokinesis (ortholog); podocyte cell migration (ortholog); ASSOCIATED WITH chronic kidney disease (ortholog); COVID-19 (ortholog); focal segmental glomerulosclerosis (ortholog); FOUND IN actin cytoskeleton (ortholog); actomyosin contractile ring (ortholog); bleb (ortholog) 8 18549557 18605718 - 30032202 116906826 MODEL JAAIVD010000027;XM_032909707;XM_032909709 XP_032765598;XP_032765600 anillin protein-coding 626133896 Grid2ip Grid2 interacting protein INVOLVED IN long-term synaptic depression (ortholog); regulation of postsynaptic cytosolic calcium ion concentration (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cerebellar granule cell to Purkinje cell synapse (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 16 9753972 9782987 - 22301074 116885752 MODEL JAAIVD010000004;XM_032887066;XM_032887068 XP_032742957;XP_032742959 delphilin protein-coding 626133923 Cct2 chaperonin containing TCP1 subunit 2 ENCODES a protein that exhibits protein folding chaperone (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN binding of sperm to zona pellucida (ortholog); chaperone-mediated protein complex assembly (ortholog); positive regulation of protein localization to Cajal body (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); Leber congenital amaurosis (ortholog); osteoporosis (ortholog); FOUND IN cell body (ortholog); chaperonin-containing T-complex (ortholog); cytosol (ortholog) 1 195207113 195219790 - 22301074;30032202 116909223 MODEL JAAIVD010000025;XM_032912727 XP_032768618 T-complex protein 1 subunit beta protein-coding 626133943 Rab11fip3 RAB11 family interacting protein 3 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN early endosome to recycling endosome transport (ortholog); endocytic recycling (ortholog); Golgi to plasma membrane protein transport (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 3247071 3328505 - 22301074;30032202 116910509 MODEL JAAIVD010000002;XM_032914407;XM_032914408;XM_032914409 XP_032770298;XP_032770299;XP_032770300 rab11 family-interacting protein 3 protein-coding 626133964 LOC116891687 cytochrome c oxidase assembly factor 3 homolog, mitochondrial-like 1 55240804 55241105 - 116891687 MODEL JAAIVD010000025 pseudo 626133965 LOC116894118 putative olfactory receptor 56B2 2 103754022 103754981 - 22301074 116894118 MODEL JAAIVD010000001;XM_032895836 XP_032751727 protein-coding 626133968 LOC116911731 40S ribosomal protein S18-like 10 69735569 69736048 + 116911731 MODEL JAAIVD010000005 pseudo 626133969 Trpv1 transient receptor potential cation channel subfamily V member 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium channel activity (ortholog); calmodulin binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); calcium ion import across plasma membrane (ortholog); calcium ion transmembrane transport (ortholog); ASSOCIATED WITH Acute Hepatitis (ortholog); alcohol withdrawal syndrome (ortholog); amphetamine abuse (ortholog); FOUND IN axon terminus (ortholog); dendrite (ortholog); external side of plasma membrane (ortholog) 9 42254322 42275739 - 22301074;30032202 116910027 MODEL JAAIVD010000002;XM_032913810 XP_032769701 protein-coding 626133988 Kcnc3 potassium voltage-gated channel subfamily C member 3 ENCODES a protein that exhibits voltage-gated potassium channel activity (ortholog); INVOLVED IN corpus callosum development (ortholog); cortical actin cytoskeleton organization (ortholog); optic nerve development (ortholog); ASSOCIATED WITH genetic disease (ortholog); spinocerebellar ataxia type 13 (ortholog); FOUND IN axolemma (ortholog); axon terminus (ortholog); calyx of Held (ortholog) 2 154930242 154944622 - 22301074;30032202 116892199 MODEL JAAIVD010000001;XM_032893737 XP_032749628 protein-coding 626133998 LOC116902610 small nucleolar RNA SNORA17 5 32166285 32166392 - 116902610 MODEL JAAIVD010000023 pseudo 626133999 Prm3 protamine 3 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN cytoplasm (ortholog) 9 11564622 11565123 + 30032202 116908730 MODEL JAAIVD010000002;XM_032912074 XP_032767965 protamine-3 protein-coding 626134004 Slc6a8 solute carrier family 6 member 8 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); creatine transmembrane transporter activity (ortholog); creatine:sodium symporter activity (ortholog); INVOLVED IN creatine transmembrane transport (ortholog); embryonic brain development (ortholog); protein catabolic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH autistic disorder (ortholog); cerebral creatine deficiency syndrome 1 (ortholog); Developmental Disabilities (ortholog); FOUND IN apical plasma membrane (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) X 128911959 128921276 - 22301074;30032202 116888468 MODEL JAAIVD010000014;XM_032889748;XM_032889749 XP_032745639;XP_032745640 sodium- and chloride-dependent creatine transporter 1 protein-coding 626134024 Mcee methylmalonyl-CoA epimerase ENCODES a protein that exhibits methylmalonyl-CoA epimerase activity (ortholog); INVOLVED IN L-methylmalonyl-CoA metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH genetic disease (ortholog); methylmalonic acidemia (ortholog); Methylmalonyl-CoA Epimerase Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 2 135990719 136015690 - 30032202 116892007 MODEL JAAIVD010000001;XM_032893468;XM_032893469 XP_032749359;XP_032749360 methylmalonyl-CoA epimerase, mitochondrial protein-coding 626134035 LOC116902926 thymosin beta-10-like 6 114649274 114663582 - 22301074;30032202 116902926 MODEL JAAIVD010000024;XM_032905250 XP_032761141 protein-coding 626134041 Smyd4 SET and MYND domain containing 4 ENCODES a protein that exhibits protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN heart development (ortholog); ASSOCIATED WITH medulloblastoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 94070840 94116545 + 22301074 116909703 MODEL JAAIVD010000002;XM_032913373 XP_032769264 SET and MYND domain-containing protein 4 protein-coding 626134056 LOC116885676 40S ribosomal protein S27-like 16 14338120 14338367 - 116885676 MODEL JAAIVD010000004 pseudo 626134057 Nap1l1 nucleosome assembly protein 1 like 1 ENCODES a protein that exhibits histone chaperone activity (ortholog); kinase binding (ortholog); INVOLVED IN cellular response to peptide hormone stimulus (ortholog); positive regulation of neural precursor cell proliferation (ortholog); positive regulation of neurogenesis (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH appendiceal neoplasm (ortholog); Colorectal Neoplasms (ortholog); hepatoblastoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 189652383 189676877 + 22301074;30032202 116908888 MODEL JAAIVD010000025;XM_032912338;XM_032912347;XM_032912355;XM_032912361 XP_032768229;XP_032768238;XP_032768246;XP_032768252 nucleosome assembly protein 1-like 1 protein-coding 626134085 Pcdhac1 protocadherin alpha subfamily C, 1 15 697022 699914 + 22301074 116884963 MODEL JAAIVD010000010;XM_032886167 XP_032742058 protocadherin alpha-C1 protein-coding 626134090 LOC116906892 uncharacterized LOC116906892 8 72811352 72813633 + 116906892 MODEL JAAIVD010000027;XR_004388779 ncrna 626134095 Ovol3 ovo like zinc finger 3 2 165773378 165775573 + 30032202 116892331 MODEL JAAIVD010000001;XM_032893959 XP_032749850 putative transcription factor ovo-like protein 3 protein-coding 626134103 LOC116892645 60S ribosomal protein L36-like 2 176601603 176601948 + 116892645 MODEL JAAIVD010000001 pseudo 626134104 Htra4 HtrA serine peptidase 4 ENCODES a protein that exhibits endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN proteolysis (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog) 13 61421636 61435178 + 22301074;30032202 116914526 MODEL JAAIVD010000008;XM_032918857 XP_032774748 serine protease HTRA4 protein-coding 626134116 Clec12a C-type lectin domain family 12 member A ENCODES a protein that exhibits pattern recognition receptor activity (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); negative regulation of immune response (ortholog); negative regulation of inflammatory response (ortholog); ASSOCIATED WITH cerebral malaria (ortholog); COVID-19 (ortholog); lymphocytic choriomeningitis (ortholog); FOUND IN plasma membrane (ortholog) 6 18233669 18250031 - 30032202 116904567 MODEL JAAIVD010000024;XM_032907365 XP_032763256 protein-coding 626134126 Rrn3 RNA polymerase I transcription factor RRN3 ENCODES a protein that exhibits RNA polymerase binding (ortholog); RNA polymerase I core promoter sequence-specific DNA binding (ortholog); RNA polymerase I general transcription initiation factor activity (ortholog); INVOLVED IN cytoplasm organization (ortholog); DNA-templated transcription initiation (ortholog); fibroblast proliferation (ortholog); PARTICIPATES IN mTOR signaling pathway; RNA polymerase I transcription pathway; ASSOCIATED WITH Parkinson's disease (ortholog); FOUND IN nucleolus (ortholog) 9 9153826 9191425 - 22301074;30032202 116908726 MODEL JAAIVD010000002;XM_032912070 XP_032767961 RNA polymerase I-specific transcription initiation factor RRN3;RRN3 homolog, RNA polymerase I transcription factor protein-coding 626134148 Lca5 lebercilin LCA5 ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH blindness (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN axoneme (ortholog); ciliary basal body (ortholog); cilium (ortholog) 8 77544206 77578868 - 30032202 116907036 MODEL JAAIVD010000027;XM_032909982;XM_032909983 XP_032765873;XP_032765874 lebercilin protein-coding 626134164 LOC116903232 uncharacterized LOC116903232 6 20138652 20139952 - 116903232 MODEL JAAIVD010000024;XR_004388263 ncrna 626134168 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50215069 50215140 - 116911917 MODEL JAAIVD010000005 trna 626134169 Olfml2a olfactomedin like 2A ENCODES a protein that exhibits extracellular matrix binding (ortholog); identical protein binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extracellular matrix (ortholog) 5 16684077 16711637 + 30032202 116901369 MODEL JAAIVD010000023;XM_032903233 XP_032759124 olfactomedin-like protein 2A protein-coding 626134180 LOC116908981 hepatitis A virus cellular receptor 1 homolog 9 29272520 29287716 - 30032202 116908981 MODEL JAAIVD010000002;XM_032912451 XP_032768342 protein-coding 626134187 LOC116902459 U6 spliceosomal RNA 5 71775747 71775853 + 116902459 MODEL JAAIVD010000023;XR_004388078 snrna 626134190 Ptger1 prostaglandin E receptor 1 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); phospholipase C-activating G protein-coupled glutamate receptor signaling pathway (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Animal Mammary Neoplasms (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 17 16604290 16606518 - 22301074;30032202 116886710 MODEL JAAIVD010000011;XM_032888216 XP_032744107 prostaglandin E2 receptor EP1 subtype protein-coding 626134195 Flrt1 fibronectin leucine rich transmembrane protein 1 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); INVOLVED IN dendrite development (ortholog); fibroblast growth factor receptor signaling pathway (ortholog); neuron projection extension (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasmic vesicle (ortholog); extracellular space (ortholog) 2 692240 709999 + 22301074;30032202 116894802 MODEL JAAIVD010000001;XM_032896463;XR_004387041;XR_004387042 XP_032752354 leucine-rich repeat transmembrane protein FLRT1 protein-coding 626134207 Steap2 STEAP2 metalloreductase ENCODES a protein that exhibits cupric reductase (NADH) activity (ortholog); ferric-chelate reductase (NADPH) activity (ortholog); INVOLVED IN copper ion import (ortholog); copper ion import across plasma membrane (ortholog); endocytosis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); endosome (ortholog) 6 137915652 137936366 - 30032202 116904134 MODEL JAAIVD010000024;XM_032907023;XM_032907024 XP_032762914;XP_032762915 metalloreductase STEAP2 protein-coding 626134220 Ap1s1 adaptor related protein complex 1 subunit sigma 1 INVOLVED IN response to virus (ortholog); retrograde transport, endosome to Golgi (ortholog); ASSOCIATED WITH genetic disease (ortholog); intrahepatic cholestasis (ortholog); lipid storage disease (ortholog); FOUND IN Golgi apparatus (ortholog); presynapse (ortholog); terminal bouton (ortholog) 16 16972148 16982667 + 22301074;30032202 116885522 MODEL JAAIVD010000004;XM_032886818;XM_032886819 XP_032742709;XP_032742710 AP-1 complex subunit sigma-1A protein-coding 626134232 Kctd21 potassium channel tetramerization domain containing 21 ENCODES a protein that exhibits cullin family protein binding (ortholog); histone deacetylase binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) 2 95658585 95674712 + 22301074;30032202 116891693 MODEL JAAIVD010000001;XM_032892959 XP_032748850 BTB/POZ domain-containing protein KCTD21 protein-coding 626134238 LOC116893203 60S ribosomal protein L7a-like 2 107826608 107827022 + 116893203 MODEL JAAIVD010000001 pseudo 626134239 Lins1 lines homolog 1 INVOLVED IN cognition (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal recessive intellectual developmental disorder 27 (ortholog); genetic disease (ortholog) 2 133652488 133678466 - 116891989 MODEL JAAIVD010000001;XM_032893440;XM_032893441 XP_032749331;XP_032749332 protein Lines homolog 1 protein-coding 626134255 LOC116888032 interferon alpha-1-like 1 65542321 65543050 - 116888032 MODEL JAAIVD010000025 pseudo 626134256 LOC116885165 microtubule-associated tumor suppressor candidate 2 homolog 16 5733669 5765604 - 30032202 116885165 MODEL JAAIVD010000004;XM_032886381 XP_032742272 protein-coding 626134263 Pkhd1l1 PKHD1 like 1 INVOLVED IN sensory perception of sound (ortholog); ASSOCIATED WITH Autosomal Recessive Nonsyndromic Deafness 124 (ortholog); FOUND IN stereocilium coat (ortholog); stereocilium tip (ortholog) 1 218962578 219111912 + 116887027 MODEL JAAIVD010000025;XM_032888552 XP_032744443 fibrocystin-L protein-coding 626134314 Kcnab3 potassium voltage-gated channel subfamily A regulatory beta subunit 3 9 48937266 48943899 + 22301074;30032202 116910008 MODEL JAAIVD010000002;XM_032913794 XP_032769685 voltage-gated potassium channel subunit beta-3 protein-coding 626134332 LOC116913451 histone deacetylase 1-like 12 74273037 74274463 - 116913451 MODEL JAAIVD010000007 pseudo 626134333 Ahcyl2 adenosylhomocysteinase like 2 ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytosol (ortholog); neuron projection (ortholog) 6 109647784 109793704 - 30032202 116904007 MODEL JAAIVD010000024;XM_032906822;XM_032906823 XP_032762713;XP_032762714 adenosylhomocysteinase 3 protein-coding 626134358 LOC116895156 transmembrane protein 14C-like 3 6756747 6757106 - 30032202 116895156 MODEL JAAIVD010000012;XM_032896523 XP_032752414 protein-coding 626134363 LOC116893335 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 2 155695370 155695835 + 22301074;30032202 116893335 MODEL JAAIVD010000001;XM_032895149 XP_032751040 protein-coding 626134367 Prr18 proline rich 18 2 187196438 187198667 + 116892812 MODEL JAAIVD010000001;XM_032894688;XM_032894689 XP_032750579;XP_032750580 proline-rich protein 18 protein-coding 626134376 Acp7 acid phosphatase 7, tartrate resistant (putative) 2 167375652 167395101 + 22301074 116894470 MODEL JAAIVD010000001;XM_032896180 XP_032752071 acid phosphatase type 7 protein-coding 626134392 Scyl3 SCY1 like pseudokinase 3 ENCODES a protein that exhibits identical protein binding (ortholog); kinase activity (ortholog); INVOLVED IN inflammatory response (ortholog); intracellular protein localization (ortholog); neuron development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 10 43148322 43172690 + 22301074 116910984 MODEL JAAIVD010000005;XM_032914697 XP_032770588 protein-associating with the carboxyl-terminal domain of ezrin protein-coding 626134410 Golga7b golgin A7 family member B ENCODES a protein that exhibits enzyme binding (ortholog) 2 41368411 41382627 + 30032202 116891179 MODEL JAAIVD010000001;XM_032891995;XM_032891996 XP_032747886;XP_032747887 golgin subfamily A member 7B protein-coding 626134421 LOC116909488 prostatic spermine-binding protein 9 1229263 1232319 + 30032202 116909488 MODEL JAAIVD010000002;XM_032913086 XP_032768977 protein-coding 626134427 Wnt10b Wnt family member 10B INVOLVED IN bone trabecula formation (ortholog); canonical Wnt signaling pathway (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); genetic disease (ortholog); Neoplasm Recurrence, Local (ortholog) 1 271595463 271601240 - 22301074;30032202 116890243 MODEL JAAIVD010000025;XM_032890971 XP_032746862 protein Wnt-10b protein-coding 626134436 LOC116900879 olfactory receptor 5D16-like 5 69518190 69519137 - 22301074;30032202 116900879 MODEL JAAIVD010000023;XM_032902556 XP_032758447 protein-coding 626134439 LOC116903128 hsc70-interacting protein-like 1 127180562 127182108 - 22301074;30032202 116903128 MODEL JAAIVD010000025;XM_032905486 XP_032761377 protein-coding 626134444 Trnap-ugg transfer RNA proline (anticodon UGG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 103095803 103095874 - 116897699 MODEL JAAIVD010000012 trna 626134445 LOC116905908 Y-box-binding protein 1-like 7 126416671 126417783 + 116905908 MODEL JAAIVD010000026 pseudo 626134446 Snx18 sorting nexin 18 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cleavage furrow formation (ortholog); endocytosis (ortholog); endosomal transport (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasmic side of plasma membrane (ortholog); cytoplasmic vesicle (ortholog) 3 183176070 183202331 + 22301074;30032202 116897183 MODEL JAAIVD010000012;XM_032898870 XP_032754761 sorting nexin-18 protein-coding 626134452 Phf3 PHD finger protein 3 ASSOCIATED WITH autism spectrum disorder (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog) 4 107557857 107627494 - 22301074;30032202 116898466 MODEL JAAIVD010000003;XM_032899720 XP_032755611 protein-coding 626134472 Arl4a ARF like GTPase 4A ENCODES a protein that exhibits GTP binding (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 7 53269482 53274172 - 22301074;30032202 116904986 MODEL JAAIVD010000026;XM_032907666;XM_032907667;XM_032907668 XP_032763557;XP_032763558;XP_032763559 ADP ribosylation factor like GTPase 4A;ADP-ribosylation factor-like protein 4A protein-coding 626134483 Cse1l chromosome segregation 1 like PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 5 151026108 151063707 - 22301074;30032202 116902321 MODEL JAAIVD010000023;XM_032904772 XP_032760663 exportin-2 protein-coding 626134512 LOC116895885 pyruvate kinase PKM-like 3 111125428 111127307 + 116895885 MODEL JAAIVD010000012 pseudo 626134513 Grm2 glutamate metabotropic receptor 2 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); glutamate receptor activity (ortholog); group II metabotropic glutamate receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); cellular response to stress (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); Binge Drinking (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN astrocyte projection (ortholog); axon (ortholog); glutamatergic synapse (ortholog) 8 97938585 97950517 - 22301074;30032202 116907512 MODEL JAAIVD010000027;XM_032910512 XP_032766403 metabotropic glutamate receptor 2 protein-coding 626134523 Camta1 calmodulin binding transcription activator 1 ENCODES a protein that exhibits sequence-specific DNA binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); positive regulation of calcineurin-NFAT signaling cascade (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog) 1 8884832 9712840 + 22301074;30032202 116890222 MODEL JAAIVD010000025;XM_032890958 XP_032746849 calmodulin-binding transcription activator 1 protein-coding 626134552 Ints13 integrator complex subunit 13 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); INVOLVED IN centrosome localization (ortholog); mitotic spindle organization (ortholog); protein localization to nuclear envelope (ortholog); ASSOCIATED WITH Chloracne (ortholog); FOUND IN cytoplasm (ortholog); INTAC complex (ortholog); integrator complex (ortholog) 6 4221191 4253167 - 30032202 116903088 MODEL JAAIVD010000024;XM_032905408 XP_032761299 protein-coding 626134574 LOC116900456 olfactory receptor 140-like 5 71121685 71122611 - 22301074 116900456 MODEL JAAIVD010000023;XM_032902197 XP_032758088 protein-coding 626134577 Vps52 VPS52 subunit of GARP complex ENCODES a protein that exhibits syntaxin binding (ortholog); INVOLVED IN ectodermal cell differentiation (ortholog); embryonic ectodermal digestive tract development (ortholog); endocytic recycling (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN EARP complex (ortholog); GARP complex (ortholog); Golgi apparatus (ortholog) 18 6962308 6971524 + 30032202 116887585 MODEL JAAIVD010000013;XM_032889210 XP_032745101 vacuolar protein sorting-associated protein 52 homolog protein-coding 626134601 LOC116907010 olfactory receptor 8B3-like 8 32213340 32215162 + 22301074;30032202 116907010 MODEL JAAIVD010000027;XM_032909943 XP_032765834 protein-coding 626134605 LOC116900117 olfactory receptor 50-like 5 13995372 13996301 + 22301074;30032202 116900117 MODEL JAAIVD010000023;XM_032901893 XP_032757784 protein-coding 626134608 Lipi lipase I ENCODES a protein that exhibits heparin binding (ortholog); phospholipase activity (ortholog); INVOLVED IN lipid catabolic process (ortholog); ASSOCIATED WITH Hypertriglyceridemia (ortholog); HYPERTRIGLYCERIDEMIA 1 (ortholog); FOUND IN extracellular space (ortholog); plasma membrane (ortholog) 4 66418359 66457204 + 22301074;30032202 116898007 MODEL JAAIVD010000003;XM_032899403 XP_032755294 lipase member I protein-coding 626134623 LOC116908377 small nucleolar RNA U2-19 8 11118151 11118230 - 116908377 MODEL JAAIVD010000027;XR_004388924 snorna 626134626 Hikeshi heat shock protein nuclear import factor hikeshi ENCODES a protein that exhibits Hsp70 protein binding (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN cellular response to heat (ortholog); Golgi organization (ortholog); lung development (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 13 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 2 111238504 111261754 + 30032202 116891858 MODEL JAAIVD010000001;XM_032893253;XM_032893254;XM_032893255 XP_032749144;XP_032749145;XP_032749146 protein Hikeshi protein-coding 626134642 Fancc FA complementation group C INVOLVED IN brain morphogenesis (ortholog); cellular response to oxidative stress (ortholog); gamete generation (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); aspirin-induced respiratory disease (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); Fanconi anaemia nuclear complex (ortholog) 14 76142976 76224721 + 22301074;30032202 116883382 MODEL JAAIVD010000009;XM_032884500 XP_032740391 Fanconi anemia group C protein protein-coding 626134662 LOC116910268 40S ribosomal protein S9-like 9 34933417 34934889 - 116910268 MODEL JAAIVD010000002 pseudo 626134663 Hspa4 heat shock protein family A (Hsp70) member 4 ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); kidney development (ortholog); negative regulation of apoptotic process (ortholog); PARTICIPATES IN cortisol signaling pathway; estrogen signaling pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Brain Injuries (ortholog); Chagas disease (ortholog); FOUND IN cytosol (ortholog); extracellular exosome (ortholog); lipid droplet (ortholog) 9 35744508 35784072 - 22301074;30032202 116908532 MODEL JAAIVD010000002;XM_032911716 XP_032767607 heat shock 70 kDa protein 4 protein-coding 626134686 LOC116889928 olfactory receptor 6C2-like 1 160890116 160891051 - 22301074;30032202 116889928 MODEL JAAIVD010000025;XM_032890741 XP_032746632 protein-coding 626134689 Bnip3l BCL2 interacting protein 3 like ENCODES a protein that exhibits identical protein binding (ortholog); lamin binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); defense response to virus (ortholog); mitochondrial protein catabolic process (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; mitochondrial autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Cerebral Hemorrhage (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 12 57487450 57510400 + 22301074;30032202 116913290 MODEL JAAIVD010000007;XM_032917415 XP_032773306 BCL2/adenovirus E1B 19 kDa protein-interacting protein 3-like protein-coding 626134699 Enpp1 ectonucleotide pyrophosphatase/phosphodiesterase 1 ENCODES a protein that exhibits ATP binding (ortholog); calcium ion binding (ortholog); cyclic-GMP-AMP hydrolase activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); adipose tissue development (ortholog); adult locomotory behavior (ortholog); PARTICIPATES IN insulin signaling pathway; niacin metabolic pathway; pantothenic acid metabolic pathway; ASSOCIATED WITH Aortic Calcification (ortholog); aortic valve disease 1 (ortholog); arterial calcification of infancy (ortholog); FOUND IN apical dendrite (ortholog); basal dendrite (ortholog); cell body (ortholog) 2 210703572 210767893 - 22301074;30032202 116892949 MODEL JAAIVD010000001;XM_032894897 XP_032750788 ectonucleotide pyrophosphatase/phosphodiesterase family member 1 protein-coding 626134728 LOC116915054 probable ribosome biogenesis protein RLP24 13 18521242 18521730 - 116915054 MODEL JAAIVD010000008 pseudo 626134729 Magel2 MAGE family member L2 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of actin nucleation (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Developmental Disease (ortholog); disorder of sexual development (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); nucleus (ortholog) 2 137563374 137567886 - 30032202 116892016 MODEL JAAIVD010000001;XM_032893479 XP_032749370 MAGE-like protein 2 protein-coding 626134734 Chrna10 cholinergic receptor nicotinic alpha 10 subunit ENCODES a protein that exhibits acetylcholine-gated monoatomic cation-selective channel activity (ortholog); transmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); INVOLVED IN detection of mechanical stimulus involved in sensory perception of sound (ortholog); inner ear morphogenesis (ortholog); membrane depolarization (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; FOUND IN acetylcholine-gated channel complex (ortholog); axon (ortholog); cation channel complex (ortholog) 2 100412232 100415972 - 22301074;30032202 116893973 MODEL JAAIVD010000001;XM_032895692;XM_032895693 XP_032751583;XP_032751584 neuronal acetylcholine receptor subunit alpha-10 protein-coding 626134746 Memo1 mediator of cell motility 1 INVOLVED IN regulation of microtubule-based process (ortholog) 7 18949258 19041878 + 116905938 MODEL JAAIVD010000026;XM_032908931;XM_032908932;XM_032908933 XP_032764822;XP_032764823;XP_032764824 protein MEMO1 protein-coding 626134766 LOC116907242 RNA polymerase II-associated protein 3-like 1 157192807 157210351 - 116907242 MODEL JAAIVD010000025 pseudo 626134767 LOC116885828 paired immunoglobulin-like type 2 receptor beta 16 15920137 15926218 - 30032202 116885828 MODEL JAAIVD010000004;XM_032887173 XP_032743064 protein-coding 626134773 Tex46 testis expressed 46 INVOLVED IN single fertilization (ortholog) 1 21617328 21621463 - 116886649 MODEL JAAIVD010000025;XM_032888148 XP_032744039 testis-expressed protein 46 protein-coding 626134779 Grina glutamate ionotropic receptor NMDA type subunit associated protein 1 ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN endoplasmic reticulum calcium ion homeostasis (ortholog); negative regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 1 248574658 248577837 + 30032202 116912982 MODEL JAAIVD010000025;XM_032917181 XP_032773072 protein lifeguard 1 protein-coding 626134790 Trim65 tripartite motif containing 65 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); inflammatory response (ortholog); negative regulation of inflammatory response (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 67933081 67938572 + 22301074;30032202 116909613 MODEL JAAIVD010000002;XM_032913236 XP_032769127 tripartite motif-containing protein 65 protein-coding 626134800 LOC116915189 small nucleolar RNA SNORA16B/SNORA16A family 13 11922139 11922277 + 116915189 MODEL JAAIVD010000008;XR_004389845 snorna 626134803 LOC116885166 zinc finger CCHC domain-containing protein 10-like 1 213525676 213526215 - 116885166 MODEL JAAIVD010000025 pseudo 626134804 Elp4 elongator acetyltransferase complex subunit 4 ENCODES a protein that exhibits phosphorylase kinase regulator activity (ortholog); INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH aniridia (ortholog); aniridia 1 (ortholog); Aniridia 2 (ortholog); FOUND IN cytoplasm (ortholog); elongator holoenzyme complex (ortholog); nucleoplasm (ortholog) 5 83611057 83806647 - 22301074;30032202 116901714 MODEL JAAIVD010000023;XM_032903846 XP_032759737 elongator complex protein 4 protein-coding 626134818 Epcam epithelial cell adhesion molecule ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); protein-containing complex binding (ortholog); INVOLVED IN cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of cell-cell adhesion mediated by cadherin (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); Breast Cancer, Familial (ortholog); carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 7 5324704 5341046 - 30032202 116905746 MODEL JAAIVD010000026;XM_032908714 XP_032764605 protein-coding 626134831 LOC116900340 uncharacterized LOC116900340 5 66995339 66997560 + 116900340 MODEL JAAIVD010000023;XR_004387928 ncrna 626134835 Tnfaip2 TNF alpha induced protein 2 ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); rheumatoid arthritis (ortholog) 7 129015927 129028496 + 22301074;30032202 116905489 MODEL JAAIVD010000026;XM_032908488 XP_032764379 tumor necrosis factor alpha-induced protein 2 protein-coding 626134851 C11H4orf36 chromosome 11 C4orf36 homolog 11 13738864 13746024 - 116912643 MODEL JAAIVD010000006;XM_032916762 XP_032772653 uncharacterized protein C4orf36 homolog protein-coding 626134859 Setd9 SET domain containing 9 ASSOCIATED WITH Ependymomas (ortholog); FOUND IN mitochondrion (ortholog) 3 185325985 185328819 + 116896032 MODEL JAAIVD010000012;XM_032897039 XP_032752930 SET domain-containing protein 9 protein-coding 626134866 LOC116890312 U4 spliceosomal RNA 1 268348476 268348566 + 116890312 MODEL JAAIVD010000025 pseudo 626134867 Hcls1 hematopoietic cell-specific Lyn substrate 1 ENCODES a protein that exhibits protein kinase binding (ortholog); protein-containing complex binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN actin filament organization (ortholog); cellular response to cytokine stimulus (ortholog); erythrocyte differentiation (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 4 21807463 21831026 + 30032202 116897873 MODEL JAAIVD010000003;XM_032899281 XP_032755172 hematopoietic lineage cell-specific protein protein-coding 626134885 LOC116887444 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8532086 8534587 + 116887444 MODEL JAAIVD010000013 pseudo 626134886 LOC116893676 olfactory receptor 5AN1-like 2 12307428 12308369 + 22301074;30032202 116893676 MODEL JAAIVD010000001;XM_032895393 XP_032751284 protein-coding 626134889 Niban1 niban apoptosis regulator 1 INVOLVED IN negative regulation of protein phosphorylation (ortholog); positive regulation of protein phosphorylation (ortholog); positive regulation of translation (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 10 31070183 31155502 + 116911375 MODEL JAAIVD010000005;XM_032915317 XP_032771208 protein Niban 1 protein-coding 626134906 Saxo2 stabilizer of axonemal microtubules 2 FOUND IN nucleus (ortholog) 2 117612781 117627385 + 22301074;30032202 116891890 MODEL JAAIVD010000001;XM_032893299 XP_032749190 protein-coding 626134914 Zcchc9 zinc finger CCHC-type containing 9 FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 3 204419500 204429424 + 22301074 116897303 MODEL JAAIVD010000012;XM_032899047 XP_032754938 zinc finger CCHC domain-containing protein 9 protein-coding 626134924 LOC116890471 5.8S ribosomal RNA 1 153015752 153015904 - 116890471 MODEL JAAIVD010000025;XR_004386660 rrna 626134927 LOC116893152 60S ribosomal protein L22-like 2 100863407 100863787 - 116893152 MODEL JAAIVD010000001 pseudo 626134928 Acap1 ArfGAP with coiled-coil, ankyrin repeat and PH domains 1 9 49490975 49505537 - 22301074;30032202 116909743 MODEL JAAIVD010000002;XM_032913421 XP_032769312 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 1 protein-coding 626134954 Stag2 STAG2 cohesin complex component ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN mitotic spindle assembly (ortholog); sister chromatid cohesion (ortholog); stem cell population maintenance (ortholog); ASSOCIATED WITH genetic disease (ortholog); Holoprosencephaly 13, X-linked (ortholog); Mullegama-Klein-Martinez syndrome (ortholog); FOUND IN chromatin (ortholog); cohesin complex (ortholog); fibrillar center (ortholog) X 108989496 109112533 + 30032202 116889279 MODEL JAAIVD010000014;XM_032890418 XP_032746309 cohesin subunit SA-2;stromal antigen 2 protein-coding 626134992 Pou3f1 POU class 3 homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN epidermis development (ortholog); forebrain development (ortholog); glial cell differentiation (ortholog); ASSOCIATED WITH rheumatoid arthritis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); transcription regulator complex (ortholog) 1 33640866 33643825 - 22301074;30032202 116896910 MODEL JAAIVD010000025;XM_032898473 XP_032754364 POU domain, class 3, transcription factor 1 protein-coding 626134996 LOC116883859 calmodulin-like 14 39852775 39853219 + 116883859 MODEL JAAIVD010000009 pseudo 626134997 LOC116886283 PRAME family member 20-like 1 14440786 14445337 + 22301074;30032202 116886283 MODEL JAAIVD010000025;XM_032887714 XP_032743605 protein-coding 626135002 LOC116905418 uncharacterized LOC116905418 7 119898056 119899487 - 116905418 MODEL JAAIVD010000026;XR_004388525 ncrna 626135006 LOC116899717 tRNA-splicing endonuclease subunit Sen2-like 4 180664666 180665262 + 116899717 MODEL JAAIVD010000003 pseudo 626135007 Dct dopachrome tautomerase ENCODES a protein that exhibits dopachrome isomerase activity (ortholog); INVOLVED IN cell development (ortholog); developmental pigmentation (ortholog); melanin biosynthetic process (ortholog); PARTICIPATES IN alkaptonuria pathway; disulfiram pharmacodynamics pathway; dopamine beta-hydroxylase deficiency pathway; ASSOCIATED WITH age related macular degeneration 7 (ortholog); Albinism (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); melanosome (ortholog) 12 7899030 7975394 + 22301074;30032202 116913398 MODEL JAAIVD010000007;XM_032917580;XM_032917581 XP_032773471;XP_032773472 L-dopachrome tautomerase protein-coding 626135022 Lysmd3 LysM domain containing 3 ENCODES a protein that exhibits peptidoglycan binding (ortholog); INVOLVED IN Golgi organization (ortholog); ASSOCIATED WITH nicotine dependence (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); plasma membrane (ortholog) 3 214709734 214715896 - 30032202 116897333 MODEL JAAIVD010000012;XM_032899090 XP_032754981 lysM and putative peptidoglycan-binding domain-containing protein 3 protein-coding 626135029 Trim54 tripartite motif containing 54 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN negative regulation of microtubule depolymerization (ortholog); FOUND IN microtubule associated complex (ortholog) 7 22948052 22966654 - 22301074 116905550 MODEL JAAIVD010000026;XM_032908581 XP_032764472 tripartite motif-containing protein 54 protein-coding 626135042 Drc12 dynein regulatory complex subunit 12 homolog ENCODES a protein that exhibits identical protein binding (ortholog) 8 38797457 38803851 + 116907997 MODEL JAAIVD010000027;XM_032911253 XP_032767144 Ccdc153 coiled-coil domain containing 153;coiled-coil domain-containing protein 153 protein-coding 626135052 Acvr1c activin A receptor type 1C ENCODES a protein that exhibits activin binding (ortholog); activin receptor activity (ortholog); activin receptor activity, type I (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); apoptotic nuclear changes (ortholog); apoptotic signaling pathway (ortholog); ASSOCIATED WITH retinal degeneration (ortholog); RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES (ortholog); FOUND IN activin receptor complex (ortholog); cell surface (ortholog) 5 36071340 36149299 - 22301074;30032202 116901428 MODEL JAAIVD010000023;XM_032903321 XP_032759212 activin receptor type-1C protein-coding 626135065 LOC116886176 60S ribosomal protein L29-like 17 45095402 45099387 + 22301074;30032202 116886176 MODEL JAAIVD010000011;XM_032887545 XP_032743436 protein-coding 626135069 LOC116896491 tubulin alpha-1C chain-like 3 60245876 60246785 - 116896491 MODEL JAAIVD010000012 pseudo 626135070 Lrfn4 leucine rich repeat and fibronectin type III domain containing 4 INVOLVED IN regulation of postsynaptic density assembly (ortholog); regulation of presynapse assembly (ortholog); synaptic membrane adhesion (ortholog); FOUND IN cell surface (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 2 3049992 3053973 + 22301074 116890764 MODEL JAAIVD010000001;XM_032891224;XM_032891225 XP_032747115;XP_032747116 leucine-rich repeat and fibronectin type-III domain-containing protein 4 protein-coding 626135079 LOC116910737 U6atac minor spliceosomal RNA 9 73838915 73839008 + 116910737 MODEL JAAIVD010000002 pseudo 626135080 LOC116894050 olfactory receptor 51I2-like 2 102662130 102663091 - 22301074 116894050 MODEL JAAIVD010000001;XM_032895771 XP_032751662 protein-coding 626135083 Tmem141 transmembrane protein 141 FOUND IN mitochondrion (ortholog) 5 11557366 11559264 + 116901285 MODEL JAAIVD010000023;XM_032903074 XP_032758965 protein-coding 626135092 Plp1 proteolipid protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein-containing complex binding (ortholog); structural constituent of myelin sheath (ortholog); INVOLVED IN AMPA selective glutamate receptor signaling pathway (ortholog); astrocyte development (ortholog); axon development (ortholog); ASSOCIATED WITH Chronic Relapsing Experimental Autoimmune Encephalomyelitis (ortholog); epilepsy (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN integrin alphav-beta3 complex (ortholog); myelin sheath (ortholog); plasma membrane (ortholog) X 88583148 88598071 + 30032202 116887800 MODEL JAAIVD010000014;XM_032889326 XP_032745217 myelin proteolipid protein protein-coding 626135103 LOC116893921 uncharacterized LOC116893921 2 82041714 82048968 + 116893921 MODEL JAAIVD010000001;XM_032895642 XP_032751533 uncharacterized protein LOC116893921 protein-coding 626135109 Tp53i13 tumor protein p53 inducible protein 13 INVOLVED IN negative regulation of cell cycle (ortholog); response to UV (ortholog); response to xenobiotic stimulus (ortholog); FOUND IN cytoplasm (ortholog) 9 96179135 96183835 - 30032202 116908538 MODEL JAAIVD010000002;XM_032911733;XM_032911734;XM_032911735 XP_032767624;XP_032767625;XP_032767626 tumor protein p53-inducible protein 13 protein-coding 626135127 LOC116888547 uncharacterized protein CXorf49 homolog X 60130828 60134407 - 116888547 MODEL JAAIVD010000014;XM_032889855 XP_032745746 protein-coding 626135134 LOC116910641 U6 spliceosomal RNA 9 93669759 93669845 - 116910641 MODEL JAAIVD010000002 pseudo 626135135 LOC116894417 keratin-associated protein 19-3-like 2 158714894 158715470 - 116894417 MODEL JAAIVD010000001;XM_032896121;XM_032896122 XP_032752012;XP_032752013 keratin-associated protein 16-3-like protein-coding 626135143 LOC116909604 olfactory receptor 2T4-like 9 39717902 39718759 + 22301074 116909604 MODEL JAAIVD010000002;XM_032913226 XP_032769117 protein-coding 626135146 LOC116909349 elongin-B-like 9 81836151 81836654 - 22301074;30032202 116909349 MODEL JAAIVD010000002;XM_032912898 XP_032768789 protein-coding 626135151 LOC116902574 small nucleolar RNA SNORA17 5 128158399 128158530 + 116902574 MODEL JAAIVD010000023;XR_004388168 snorna 626135154 Coq3 coenzyme Q3, methyltransferase ENCODES a protein that exhibits 3-demethylubiquinol 3-O-methyltransferase activity (ortholog); 3-demethylubiquinone 3-O-methyltransferase activity (ortholog); O-methyltransferase activity (ortholog); INVOLVED IN glycerol metabolic process (ortholog); methylation (ortholog); ubiquinone biosynthetic process (ortholog); PARTICIPATES IN ubiquinone biosynthetic pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 1 121433699 121460249 - 22301074 116902889 MODEL JAAIVD010000025;XM_032905222 XP_032761113 ubiquinone biosynthesis O-methyltransferase, mitochondrial protein-coding 626135165 Svip small VCP interacting protein ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN negative regulation of ERAD pathway (ortholog); negative regulation of protein-containing complex assembly (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog) 2 148641264 148648766 + 30032202 116892062 MODEL JAAIVD010000001;XM_032893528 XP_032749419 small VCP/p97-interacting protein protein-coding 626135173 Sfrp5 secreted frizzled related protein 5 INVOLVED IN convergent extension involved in axis elongation (ortholog); digestive tract morphogenesis (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog) 2 41309175 41313380 - 30032202 116891177 MODEL JAAIVD010000001;XM_032891992 XP_032747883 secreted frizzled-related protein 5 protein-coding 626135180 Phgr1 proline, histidine and glycine rich 1 5 96936232 96941423 + 116901787 MODEL JAAIVD010000023;XM_032903934 XP_032759825 proline, histidine and glycine-rich protein 1 protein-coding 626135188 LOC116893661 membrane-spanning 4-domains subfamily A member 6B-like 2 11392789 11402464 - 30032202 116893661 MODEL JAAIVD010000001;XM_032895380 XP_032751271 protein-coding 626135198 Tas1r2 taste 1 receptor member 2 ENCODES a protein that exhibits sweet taste receptor activity (ortholog); taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of sweet taste (ortholog); positive regulation of cytokinesis (ortholog); sensory perception of sweet taste (ortholog); FOUND IN receptor complex (ortholog); sweet taste receptor complex (ortholog) 1 18513737 18530204 - 22301074;30032202 116886512 MODEL JAAIVD010000025;XM_032888024 XP_032743915 taste receptor type 1 member 2 protein-coding 626135206 Acbd5 acyl-CoA binding domain containing 5 INVOLVED IN pexophagy (ortholog); ASSOCIATED WITH cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN nucleoplasm (ortholog); peroxisome (ortholog) 14 1477843 1520673 - 22301074;30032202 116883292 MODEL JAAIVD010000009;XM_032884289;XM_032884290;XM_032884291;XM_032884292;XM_032884293;XM_032884294;XM_032884295;XM_032884296;XM_032884298;XM_032884299;XM_032884300;XM_032884301 XP_032740180;XP_032740181;XP_032740182;XP_032740183;XP_032740184;XP_032740185;XP_032740186;XP_032740187;XP_032740189;XP_032740190;XP_032740191;XP_032740192 acyl-CoA-binding domain-containing protein 5 protein-coding 626135246 Dmbx1 diencephalon/mesencephalon homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN adult feeding behavior (ortholog); adult locomotory behavior (ortholog); brain development (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); FOUND IN transcription regulator complex (ortholog) 1 39595913 39604503 - 22301074;30032202 116887385 MODEL JAAIVD010000025;XM_032888982;XM_032888989 XP_032744873;XP_032744880 diencephalon/mesencephalon homeobox protein 1 protein-coding 626135258 LOC116910197 60S ribosomal protein L21-like 9 56776619 56777099 - 116910197 MODEL JAAIVD010000002 pseudo 626135259 Prpf8 pre-mRNA processing factor 8 ENCODES a protein that exhibits K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); cellular response to tumor necrosis factor (ortholog); mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN retinitis pigmentosa pathway; spliceosome pathway; ASSOCIATED WITH Choroideremia (ortholog); Developmental Disease (ortholog); fundus dystrophy (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog); nucleus (ortholog) 9 94200583 94224717 + 22301074;30032202 116908670 MODEL JAAIVD010000002;XM_032911961 XP_032767852 pre-mRNA-processing-splicing factor 8 protein-coding 626135305 Gyg1 glycogenin 1 ENCODES a protein that exhibits D-glucose binding (ortholog); glycogenin glucosyltransferase activity (ortholog); manganese ion binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); PARTICIPATES IN glycogen biosynthetic pathway; ASSOCIATED WITH Cardiac Arrhythmias (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog) 3 133970542 134005764 + 22301074;30032202 116896999 MODEL JAAIVD010000012;XM_032898604 XP_032754495 glycogenin-1 protein-coding 626135315 LOC116888858 60S ribosomal protein L19-like X 65746741 65747394 - 116888858 MODEL JAAIVD010000014 pseudo 626135316 LOC116890318 U5 spliceosomal RNA 1 185598437 185598552 - 116890318 MODEL JAAIVD010000025;XR_004386542 snrna 626135319 Tacr2 tachykinin receptor 2 ENCODES a protein that exhibits substance K receptor activity (ortholog); INVOLVED IN intestine smooth muscle contraction (ortholog); negative regulation of luteinizing hormone secretion (ortholog); operant conditioning (ortholog); ASSOCIATED WITH Abnormal Reflexes (ortholog); asthma (ortholog); bronchial disease (ortholog); FOUND IN plasma membrane (ortholog); sperm flagellum (ortholog); sperm head (ortholog) 18 28082780 28097723 + 22301074;30032202 116887275 MODEL JAAIVD010000013;XM_032888847 XP_032744738 substance-K receptor protein-coding 626135328 LOC116899934 protein SET-like 1 108379178 108380091 + 116899934 MODEL JAAIVD010000025 pseudo 626135329 Hhip hedgehog interacting protein ENCODES a protein that exhibits hedgehog family protein binding (ortholog); zinc ion binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); dorsal/ventral pattern formation (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH basal cell carcinoma (ortholog); chronic obstructive pulmonary disease (ortholog); Colorectal Neoplasms (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 17 20062152 20151695 + 116886541 MODEL JAAIVD010000011;XM_032888061 XP_032743952 hedgehog-interacting protein protein-coding 626135346 Mc3r melanocortin 3 receptor ENCODES a protein that exhibits melanocortin receptor activity (ortholog); melanocyte-stimulating hormone receptor activity (ortholog); neuropeptide binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); circadian regulation of gene expression (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphas family; melanocortin system pathway; ASSOCIATED WITH Acute-Phase Reaction (ortholog); obesity (ortholog) 5 145755562 145757628 - 22301074;30032202;8415620 116900757 MODEL JAAIVD010000023;X70667;XM_032902466 CAA50005;XP_032758357 MC3-R melanocortin receptor 3 protein-coding 626135352 Plekhg3 pleckstrin homology and RhoGEF domain containing G3 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN regulation of cell migration (ortholog); regulation of establishment of cell polarity (ortholog) 7 90691482 90734455 + 22301074 116905184 MODEL JAAIVD010000026;XM_032907968;XM_032907969;XM_032907970;XM_032907971 XP_032763859;XP_032763860;XP_032763861;XP_032763862 pleckstrin homology domain-containing family G member 3 protein-coding 626135382 Il20 interleukin 20 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-20 receptor binding (ortholog); interleukin-22 receptor binding (ortholog); INVOLVED IN positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); end stage renal disease (ortholog); Experimental Arthritis (ortholog); FOUND IN extracellular space (ortholog) 10 4892597 4896235 + 22301074 116911735 MODEL JAAIVD010000005;XM_032915715;XM_032915716 XP_032771606;XP_032771607 interleukin-20 protein-coding 626135394 Ncald neurocalcin delta ENCODES a protein that exhibits actin binding (ortholog); alpha-tubulin binding (ortholog); clathrin binding (ortholog); INVOLVED IN calcium-mediated signaling (ortholog); regulation of systemic arterial blood pressure (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 1 210861987 211038276 - 22301074;30032202 116910676 MODEL JAAIVD010000025;XM_032914582;XM_032914583 XP_032770473;XP_032770474 neurocalcin-delta protein-coding 626135407 LOC116883726 60S ribosomal protein L37-like 14 48916341 48916685 + 22301074;30032202 116883726 MODEL JAAIVD010000009;XM_032884959 XP_032740850 protein-coding 626135412 LOC116892711 zinc finger protein 256-like 2 178923699 178934669 + 22301074 116892711 MODEL JAAIVD010000001;XM_032894575;XM_032894576;XM_032894577 XP_032750466;XP_032750467;XP_032750468 zinc finger protein 2 homolog protein-coding 626135425 LOC116913430 heparan-sulfate 6-O-sulfotransferase 3-like 12 4930313 5128901 - 22301074;30032202 116913430 MODEL JAAIVD010000007;XM_032917622 XP_032773513 protein-coding 626135431 Spag17 sperm associated antigen 17 INVOLVED IN axonemal central apparatus assembly (ortholog); epithelial cilium movement involved in extracellular fluid movement (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH cranioectodermal dysplasia 2 (ortholog); Idiopathic Short Stature, Autosomal (ortholog); Meniere's disease (ortholog); FOUND IN acrosomal vesicle (ortholog); axonemal central apparatus (ortholog); cytoplasm (ortholog) 3 57950056 58171649 - 30032202 116895390 MODEL JAAIVD010000012;XM_032896680 XP_032752571 sperm-associated antigen 17 protein-coding 626135481 Sec61a2 SEC61 translocon subunit alpha 2 ENCODES a protein that exhibits ribosome binding (ortholog); ASSOCIATED WITH polycystic liver disease (ortholog) 14 12185197 12211332 - 22301074;30032202 116883789 MODEL JAAIVD010000009;XM_032885032;XM_032885033 XP_032740923;XP_032740924 protein transport protein Sec61 subunit alpha protein-coding 626135502 Hbs1l HBS1 like translational GTPase INVOLVED IN nuclear-transcribed mRNA catabolic process, no-go decay (ortholog); rescue of stalled ribosome (ortholog); ribosome disassembly (ortholog); PARTICIPATES IN translation termination pathway; ASSOCIATED WITH beta thalassemia (ortholog); FOUND IN cytosolic ribosome (ortholog); Dom34-Hbs1 complex (ortholog) 2 215217712 215296874 - 22301074;30032202 116892968 MODEL JAAIVD010000001;XM_032894921;XM_032894922 XP_032750812;XP_032750813 HBS1-like protein protein-coding 626135529 Srsf7 serine and arginine rich splicing factor 7 ENCODES a protein that exhibits protein domain specific binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); negative regulation of mRNA splicing, via spliceosome (ortholog); RNA splicing (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); Glomerular Hyperfiltration (ortholog); FOUND IN nucleoplasm (ortholog) 7 12867762 12874920 + 22301074;30032202 116905856 MODEL JAAIVD010000026;XM_032908834;XM_032908835;XM_032908836;XM_032908837;XM_032908838;XM_032908839 XP_032764725;XP_032764726;XP_032764727;XP_032764728;XP_032764729;XP_032764730 serine/arginine-rich splicing factor 7 protein-coding 626135548 LOC116895110 U2 spliceosomal RNA 2 24012763 24012899 + 116895110 MODEL JAAIVD010000001 pseudo 626135549 LOC116886991 H/ACA ribonucleoprotein complex subunit 2-like 1 31267955 31268470 + 116886991 MODEL JAAIVD010000025 pseudo 626135550 Brca1 BRCA1 DNA repair associated ENCODES a protein that exhibits chromatin binding (ortholog); damaged DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN cellular response to indole-3-methanol (ortholog); cellular response to ionizing radiation (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; forkhead class A signaling pathway; homologous recombination pathway of double-strand break repair; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Animal Mammary Neoplasms (ortholog); bilateral breast cancer (ortholog); FOUND IN BRCA1-A complex (ortholog); BRCA1-B complex (ortholog); BRCA1-BARD1 complex (ortholog) 9 60775195 60835480 - 22301074;30032202 116910549 MODEL JAAIVD010000002;XM_032914456 XP_032770347 breast cancer type 1 susceptibility protein protein-coding 626135578 Zpld1 zona pellucida like domain containing 1 INVOLVED IN vestibular reflex (ortholog) 4 39388612 39424922 - 30032202 116897913 MODEL JAAIVD010000003;XM_032899314 XP_032755205 zona pellucida-like domain-containing protein 1 protein-coding 626135590 Tubb tubulin beta class I ENCODES a protein that exhibits GTPase activating protein binding (ortholog); MHC class I protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN microtubule-based process (ortholog); odontoblast differentiation (ortholog); regulation of synapse organization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations 6 (ortholog); congenital fibrosis of the extraocular muscles (ortholog); congenital symmetric circumferential skin creases 1 (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); cytoplasmic ribonucleoprotein granule (ortholog) 18 9048115 9051599 - 22301074;30032202 116887468 MODEL JAAIVD010000013;XM_032889077 XP_032744968 tubulin beta chain protein-coding 626135598 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42453433 42453506 + 116884232 MODEL JAAIVD010000009 trna 626135599 LOC116884252 40S ribosomal protein S28-like 15 64861374 64861642 - 22301074;30032202 116884252 MODEL JAAIVD010000010;XM_032885336 XP_032741227 protein-coding 626135603 Lipk lipase family member K 2 33628416 33659641 + 22301074;30032202 116893778 MODEL JAAIVD010000001;XM_032895479;XM_032895480;XM_032895481 XP_032751370;XP_032751371;XP_032751372 lipase member K protein-coding 626135624 LOC116893147 peptidyl-prolyl cis-trans isomerase A-like 2 96218241 96223781 + 116893147 MODEL JAAIVD010000001 pseudo 626135625 Agt angiotensinogen ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); receptor ligand activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); aldosterone secretion (ortholog); angiotensin-activated signaling pathway (ortholog); PARTICIPATES IN angiotensin (1-7) signaling pathway; angiotensin II signaling pathway; angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Albuminuria (ortholog); alcoholic cardiomyopathy (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); mitochondrion (ortholog) 17 44081725 44088224 - 22301074;30032202 116886354 MODEL JAAIVD010000011;XM_032887807 XP_032743698 protein-coding 626135633 LOC116887358 heat shock cognate 71 kDa protein-like 18 43895115 43897044 - 116887358 MODEL JAAIVD010000013 pseudo 626135634 LOC116906052 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 7 47274664 47275058 - 116906052 MODEL JAAIVD010000026 pseudo 626135635 LOC116893579 solute carrier family 25 member 51-like 2 225332626 225333601 - 116893579 MODEL JAAIVD010000001 pseudo 626135636 LOC116894924 small nucleolar RNA SNORD27 2 9216685 9216758 - 116894924 MODEL JAAIVD010000001;XR_004387123 snorna 626135639 LOC116887747 U6atac minor spliceosomal RNA 18 39551905 39552000 + 116887747 MODEL JAAIVD010000013 pseudo 626135640 LOC116904081 uncharacterized LOC116904081 6 130121946 130142599 - 116904081 MODEL JAAIVD010000024;XR_004388327 ncrna 626135645 LOC116900814 H/ACA ribonucleoprotein complex subunit DKC1-like 5 31904142 32046286 + 116900814 MODEL JAAIVD010000023 pseudo 626135646 LOC116888460 multiple coagulation factor deficiency protein 2 homolog X 63278682 63280078 - 22301074 116888460 MODEL JAAIVD010000014;XM_032889740 XP_032745631 protein-coding 626135651 Aldh1l1 aldehyde dehydrogenase 1 family member L1 ENCODES a protein that exhibits aldehyde dehydrogenase (NAD+) activity (ortholog); aldehyde dehydrogenase (NADP+) activity (ortholog); aldehyde dehydrogenase [NAD(P)+] activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); folic acid metabolic process (ortholog); NADPH regeneration (ortholog); PARTICIPATES IN altered folate cycle metabolic pathway; folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); protein-containing complex (ortholog) 6 56319298 56365980 - 22301074;30032202 116903507 MODEL JAAIVD010000024;XM_032906111;XM_032906112 XP_032762002;XP_032762003 cytosolic 10-formyltetrahydrofolate dehydrogenase protein-coding 626135681 LOC116889534 small nucleolar RNA SNORA35 X 97876664 97876791 + 116889534 MODEL JAAIVD010000014;XR_004386469 snorna 626135684 Cntn1 contactin 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); INVOLVED IN central nervous system myelin formation (ortholog); cerebellum development (ortholog); locomotory behavior (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Ataxia (ortholog); Compton-North congenital myopathy (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog); presynaptic membrane (ortholog) 1 265059033 265350082 + 30032202 116884221 MODEL JAAIVD010000025;XM_032885326 XP_032741217 contactin-1 protein-coding 626135712 Kcnc4 potassium voltage-gated channel subfamily C member 4 ENCODES a protein that exhibits voltage-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potential (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN axon development (ortholog); cerebral cortex development (ortholog); corpus callosum development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Hyperalgesia (ortholog); sciatic neuropathy (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); calyx of Held (ortholog) 3 50796416 50824082 + 22301074;30032202 116896389 MODEL JAAIVD010000012;XM_032897515;XM_032897516;XM_032897518;XM_032897519 XP_032753406;XP_032753407;XP_032753409;XP_032753410 protein-coding 626135731 LOC116900888 olfactory receptor 4P4-like 5 70060284 70061182 + 116900888 MODEL JAAIVD010000023 pseudo 626135732 LOC116885263 ubiquitin-conjugating enzyme E2 variant 1-like 16 30753905 30755513 + 116885263 MODEL JAAIVD010000004 pseudo 626135733 Cldn9 claudin 9 ENCODES a protein that exhibits virus receptor activity (ortholog); INVOLVED IN cell-cell junction organization (ortholog); tight junction organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness 116 (ortholog); Hearing Loss (ortholog); nonsyndromic deafness (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); plasma membrane (ortholog) 9 989292 990869 - 22301074;30032202 116909052 MODEL JAAIVD010000002;XM_032912532 XP_032768423 claudin-9 protein-coding 626135738 LOC116888181 ATP synthase subunit beta, mitochondrial-like X 118881646 118898354 - 116888181 MODEL JAAIVD010000014 pseudo 626135739 LOC116911441 olfactory receptor 6K6 10 52822882 52823847 - 22301074 116911441 MODEL JAAIVD010000005;XM_032915407 XP_032771298 protein-coding 626135743 Wdfy2 WD repeat and FYVE domain containing 2 INVOLVED IN positive regulation of fat cell differentiation (ortholog); positive regulation of protein phosphorylation (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); vesicle (ortholog) 12 61418991 61573389 - 22301074 116913088 MODEL JAAIVD010000007;XM_032917221;XM_032917223 XP_032773112;XP_032773114 WD repeat and FYVE domain-containing protein 2 protein-coding 626135762 Oaz2 ornithine decarboxylase antizyme 2 ENCODES a protein that exhibits ornithine decarboxylase inhibitor activity (ortholog); INVOLVED IN negative regulation of polyamine transmembrane transport (ortholog); positive regulation of intracellular protein transport (ortholog); positive regulation of protein catabolic process (ortholog); PARTICIPATES IN polyamine metabolic pathway 8 59990896 60003349 + 22301074;30032202 116906711 MODEL JAAIVD010000027;XM_032909518 XP_032765409 protein-coding 626135771 Fam169b Protein FAM169B 2 131983343 132039637 - 116893250 MODEL JAAIVD010000001;XM_032895113 XP_032751004 family with sequence similarity 169 member B protein-coding 626135782 Cc2d2a coiled-coil and C2 domain containing 2A INVOLVED IN axoneme assembly (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH anencephaly (ortholog); brain disease (ortholog); ciliopathy (ortholog); FOUND IN ciliary transition zone (ortholog); MKS complex (ortholog) 11 62021408 62090600 - 30032202 116912106 MODEL JAAIVD010000006;XM_032916004;XM_032916005 XP_032771895;XP_032771896 coiled-coil and C2 domain-containing protein 2A protein-coding 626135822 Pomk protein O-mannose kinase ENCODES a protein that exhibits carbohydrate kinase activity (ortholog); phosphotransferase activity, alcohol group as acceptor (ortholog); INVOLVED IN brain development (ortholog); carbohydrate phosphorylation (ortholog); learning or memory (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A12 (ortholog); genetic disease (ortholog); hydrocephalus (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 13 60520153 60523972 + 22301074;30032202 116914771 MODEL JAAIVD010000008;XM_032919216 XP_032775107 protein-coding 626135828 LOC116885799 olfactory receptor 13C7-like 1 2700551 2701507 + 22301074 116885799 MODEL JAAIVD010000025;XM_032887135 XP_032743026 protein-coding 626135831 Apba3 amyloid beta precursor protein binding family A member 3 ENCODES a protein that exhibits amyloid-beta binding (ortholog); enzyme binding (ortholog); enzyme inhibitor activity (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); negative regulation of catalytic activity (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 1 153618746 153624156 - 22301074;30032202 116904447 MODEL JAAIVD010000025;XM_032907272 XP_032763163 amyloid-beta A4 precursor protein-binding family A member 3 protein-coding 626135846 LOC116893456 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178540654 178547118 - 116893456 MODEL JAAIVD010000001 pseudo 626135847 Znf575 zinc finger protein 575 2 170130105 170131468 + 30032202 116892483 MODEL JAAIVD010000001;XM_032894211;XM_032894212 XP_032750102;XP_032750103 protein-coding 626135855 LOC116912000 proline-rich protein 32-like 11 50221108 50221731 - 116912000 MODEL JAAIVD010000006 pseudo 626135856 LOC116912420 transmembrane protease serine 11C 11 600518 662366 - 22301074 116912420 MODEL JAAIVD010000006;XM_032916486 XP_032772377 protein-coding 626135867 LOC116906520 U4 spliceosomal RNA 7 76468067 76468200 - 116906520 MODEL JAAIVD010000026;XR_004388742 snrna 626135870 LOC116889156 peroxiredoxin-4-like X 37095900 37099284 + 116889156 MODEL JAAIVD010000014;XM_032890322 XP_032746213 protein-coding 626135876 LOC116903749 uncharacterized LOC116903749 6 84741234 84757877 + 116903749 MODEL JAAIVD010000024;XR_004388293 ncrna 626135880 Tmed6 transmembrane p24 trafficking protein 6 17 26788286 26794336 - 30032202 116886463 MODEL JAAIVD010000011;XM_032887964 XP_032743855 transmembrane emp24 domain-containing protein 6 protein-coding 626135888 Inppl1 inositol polyphosphate phosphatase like 1 ENCODES a protein that exhibits inositol-polyphosphate 5-phosphatase activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); SH2 domain binding (ortholog); INVOLVED IN actin filament organization (ortholog); apoptotic process (ortholog); endochondral ossification (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; phosphatidylinositol 3-kinase class I signaling pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN basal plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 100117171 100131586 - 22301074 116891768 MODEL JAAIVD010000001;XM_032893091 XP_032748982 phosphatidylinositol 3,4,5-trisphosphate 5-phosphatase 2 protein-coding 626135921 LOC116888928 lipoyl synthase, mitochondrial-like X 128523675 128524948 + 116888928 MODEL JAAIVD010000014 pseudo 626135922 LOC116906501 U2 spliceosomal RNA 7 60355532 60355700 - 116906501 MODEL JAAIVD010000026 pseudo 626135923 LOC116902135 coiled-coil domain-containing protein 171-like 1 127444012 127532373 + 116902135 MODEL JAAIVD010000025;XM_032904501 XP_032760392 protein-coding 626135930 LOC116900869 ATP synthase F(0) complex subunit C1, mitochondrial-like 5 68107921 68110824 - 116900869 MODEL JAAIVD010000023 pseudo 626135931 Nlrc4 NLR family CARD domain containing 4 ENCODES a protein that exhibits ATP binding (ortholog); caspase binding (ortholog); endopeptidase activator activity (ortholog); INVOLVED IN activation of innate immune response (ortholog); defense response to bacterium (ortholog); detection of bacterium (ortholog); ASSOCIATED WITH Autoinflammation with Infantile Enterocolitis (ortholog); Chediak-Higashi syndrome (ortholog); Cryopyrin-Associated Periodic Syndromes (ortholog); FOUND IN cytosol (ortholog); IPAF inflammasome complex (ortholog); plasma membrane (ortholog) 7 18801478 18823956 + 22301074;30032202 116905933 MODEL JAAIVD010000026;XM_032908923 XP_032764814 NLR family CARD domain-containing protein 4 protein-coding 626135943 LOC116913789 histidine--tRNA ligase, cytoplasmic-like 12 45304250 45306327 - 116913789 MODEL JAAIVD010000007 pseudo 626135944 LOC116911615 5'-nucleotidase domain-containing protein 2-like 10 28577799 28578825 + 116911615 MODEL JAAIVD010000005 pseudo 626135945 LOC116890301 U4 spliceosomal RNA 1 147293027 147293173 + 116890301 MODEL JAAIVD010000025;XR_004386536 snrna 626135948 Canx calnexin ENCODES a protein that exhibits apolipoprotein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN clathrin-dependent endocytosis (ortholog); synaptic vesicle endocytosis (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Myocardial Ischemia (ortholog); obesity (ortholog); FOUND IN axon (ortholog); dendrite cytoplasm (ortholog); dendritic spine (ortholog) 9 32960477 32991509 - 22301074;30032202 116910090 MODEL JAAIVD010000002;XM_032913912;XM_032913913;XM_032913914 XP_032769803;XP_032769804;XP_032769805 protein-coding 626135973 Irs2 insulin receptor substrate 2 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); insulin receptor binding (ortholog); phosphatidylinositol 3-kinase activator activity (ortholog); INVOLVED IN brain development (ortholog); cellular response to endothelin (ortholog); cellular response to glucose stimulus (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Diabetic Nephropathies (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 13 72845803 72869625 + 30032202 116914258 MODEL JAAIVD010000008;XM_032918470 XP_032774361 protein-coding 626135979 Stx19 syntaxin 19 1 214621283 214626675 + 22301074;30032202 116910957 MODEL JAAIVD010000025;XM_032914687 XP_032770578 syntaxin-19 protein-coding 626135985 LOC116909085 F-box only protein 5-like 9 94048828 94053192 + 116909085 MODEL JAAIVD010000002 pseudo 626135986 Cul2 cullin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin ligase complex scaffold activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN protein catabolic process (ortholog); ubiquitin-dependent protein catabolic process via the C-end degron rule pathway (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; ASSOCIATED WITH inflammatory bowel disease (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 14 29881456 29907632 + 22301074;30032202 116883360 MODEL JAAIVD010000009;XM_032884438 XP_032740329 cullin-2 protein-coding 626136009 Ckm creatine kinase, M-type ENCODES a protein that exhibits creatine kinase activity (ortholog); INVOLVED IN phosphocreatine biosynthetic process (ortholog); PARTICIPATES IN creatine metabolic pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Colonic Neoplasms (ortholog); ischemia (ortholog); FOUND IN extracellular space (ortholog) 2 171200168 171206955 - 30032202 116892531 MODEL JAAIVD010000001;XM_032894290 XP_032750181 creatine kinase M-type protein-coding 626136020 LOC116884328 uncharacterized LOC116884328 15 5542763 5561579 + 116884328 MODEL JAAIVD010000010;XR_004385866 ncrna 626136025 LOC116907494 60S ribosomal protein L35a-like 8 59805291 59805643 + 22301074;30032202 116907494 MODEL JAAIVD010000027;XM_032910487 XP_032766378 protein-coding 626136029 LOC116893670 olfactory receptor 4D10 2 12168005 12168943 - 22301074 116893670 MODEL JAAIVD010000001;XM_032895386 XP_032751277 protein-coding 626136033 LOC116895923 filaggrin-like 3 121404797 121410246 - 22301074 116895923 MODEL JAAIVD010000012;XM_032896998 XP_032752889 protein-coding 626136037 Npepps aminopeptidase puromycin sensitive ENCODES a protein that exhibits aminopeptidase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); positive regulation of protein targeting to mitochondrion (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); FOUND IN cytosol (ortholog) 9 57099147 57186141 + 22301074;30032202 116910108 MODEL JAAIVD010000002;XM_032913935;XM_032913936;XM_032913937 XP_032769826;XP_032769827;XP_032769828 puromycin-sensitive aminopeptidase protein-coding 626136072 Tcf19 transcription factor 19 INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); regulation of gene expression (ortholog); type B pancreatic cell proliferation (ortholog); ASSOCIATED WITH Colonic Neoplasms (ortholog); hepatocellular carcinoma (ortholog); sensorineural hearing loss (ortholog); FOUND IN nucleus (ortholog) 18 8720760 8724932 - 22301074;30032202 116887453 MODEL JAAIVD010000013;XM_032889060;XM_032889061 XP_032744951;XP_032744952 protein-coding 626136085 LOC116909957 translational activator of cytochrome c oxidase 1 ENCODES a protein that exhibits mitochondrial ribosome binding (ortholog); mRNA binding (ortholog); rRNA binding (ortholog); INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); motor learning (ortholog); regulation of mitochondrial translation (ortholog); ASSOCIATED WITH cytochrome-c oxidase deficiency disease (ortholog); genetic disease (ortholog); Leigh disease (ortholog); FOUND IN mitochondrion (ortholog) 9 73038619 73046044 - 30032202 116909957 MODEL JAAIVD010000002;XM_032913732 XP_032769623 protein-coding 626136094 LOC116898426 60S ribosomal protein L18-like 1 98373097 98373669 - 116898426 MODEL JAAIVD010000025 pseudo 626136095 Actc1 actin alpha cardiac muscle 1 ENCODES a protein that exhibits ATP binding (ortholog); microfilament motor activity (ortholog); myosin binding (ortholog); INVOLVED IN actin filament-based movement (ortholog); actin-myosin filament sliding (ortholog); actomyosin structure organization (ortholog); ASSOCIATED WITH atrial heart septal defect 5 (ortholog); cardiomyopathy (ortholog); dilated cardiomyopathy (ortholog); FOUND IN actin filament (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 5 92246878 92252481 - 30032202 116901760 MODEL JAAIVD010000023;X80130;XM_032903897;XM_032903898 CAA56429;XP_032759788;XP_032759789 actin, alpha cardiac muscle 1 protein-coding 626136110 Hgs hepatocyte growth factor-regulated tyrosine kinase substrate ENCODES a protein that exhibits identical protein binding (ortholog); protein domain specific binding (ortholog); ubiquitin-like protein ligase binding (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); membrane invagination (ortholog); negative regulation of angiogenesis (ortholog); PARTICIPATES IN autophagy pathway; vascular endothelial growth factor signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome (ortholog) 9 63540680 63558463 - 22301074 116908609 MODEL JAAIVD010000002;XM_032911834 XP_032767725 protein-coding 626136136 LOC116908987 V-type proton ATPase 16 kDa proteolipid subunit-like 9 61912154 61913136 - 22301074 116908987 MODEL JAAIVD010000002;XM_032912457 XP_032768348 protein-coding 626136141 LOC116883223 serpin B6-like 14 52251195 52260423 - 30032202 116883223 MODEL JAAIVD010000009;XM_032884237 XP_032740128 protein-coding 626136150 LOC116911766 60S ribosomal protein L36-like 1 38085454 38085948 + 22301074;30032202 116911766 MODEL JAAIVD010000025;XM_032915996 XP_032771887 protein-coding 626136155 LOC116889956 olfactory receptor 6C2-like 1 161766702 161767683 + 116889956 MODEL JAAIVD010000025 pseudo 626136156 LOC116888711 developmental pluripotency-associated protein 3-like 1 100160545 100161021 + 116888711 MODEL JAAIVD010000025 pseudo 626136157 Nploc4 NPL4 homolog, ubiquitin recognition factor ENCODES a protein that exhibits ATPase binding (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); K63-linked polyubiquitin modification-dependent protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); Golgi organization (ortholog); negative regulation of RIG-I signaling pathway (ortholog); FOUND IN UFD1-NPL4 complex (ortholog); VCP-NPL4-UFD1 AAA ATPase complex (ortholog) 9 63586517 63641043 + 30032202 116910337 MODEL JAAIVD010000002;XM_032914193 XP_032770084 nuclear protein localization protein 4 homolog protein-coding 626136178 Palb2 partner and localizer of BRCA2 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); double-strand break repair via homologous recombination (ortholog); embryonic organ development (ortholog); PARTICIPATES IN nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH anaplastic ependymoma (ortholog); autosomal recessive spinocerebellar ataxia 8 (ortholog); B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1 (ortholog); FOUND IN DNA repair complex (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 2 79697162 79721671 + 22301074;30032202 116891558 MODEL JAAIVD010000001;XM_032892731;XM_032892732;XM_032892733;XM_032892734 XP_032748622;XP_032748623;XP_032748624;XP_032748625 protein-coding 626136203 LOC116902590 U1 spliceosomal RNA 5 142071449 142071604 - 116902590 MODEL JAAIVD010000023;XR_004388182 snrna 626136206 LOC116905296 uncharacterized LOC116905296 7 99547894 99557884 + 116905296 MODEL JAAIVD010000026;XR_004388511 ncrna 626136210 Pnma6e PNMA family member 6E X 129011685 129013948 - 116888219 MODEL JAAIVD010000014;XM_032889510 XP_032745401 paraneoplastic antigen Ma6E protein-coding 626136214 Dmrt1 doublesex and mab-3 related transcription factor 1 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell morphogenesis (ortholog); developmental process involved in reproduction (ortholog); germ cell migration (ortholog); ASSOCIATED WITH 46,XY complete gonadal dysgenesis (ortholog); 46,XY sex reversal 4 (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); female germ cell nucleus (ortholog); nucleus (ortholog) 2 25608334 25704934 + 30032202 116893748 MODEL JAAIVD010000001;XM_032895456 XP_032751347 doublesex- and mab-3-related transcription factor 1 protein-coding 626136223 LOC116905590 protein Asterix-like 7 5505889 5506230 + 116905590 MODEL JAAIVD010000026 pseudo 626136224 LOC116886970 peptidyl-prolyl cis-trans isomerase D-like 18 36313372 36363443 - 116886970 MODEL JAAIVD010000013 pseudo 626136225 LOC116906145 macrophage migration inhibitory factor-like 7 94520130 94520546 - 30032202 116906145 MODEL JAAIVD010000026;XM_032909131 XP_032765022 protein-coding 626136228 Hs3st2 heparan sulfate-glucosamine 3-sulfotransferase 2 ENCODES a protein that exhibits [heparan sulfate]-glucosamine 3-sulfotransferase activity (ortholog); INVOLVED IN circadian rhythm (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH colon cancer (ortholog); lung cancer (ortholog); lung non-small cell carcinoma (ortholog) 2 80291069 80400310 - 30032202 116891570 MODEL JAAIVD010000001;XM_032892750 XP_032748641 heparan sulfate glucosamine 3-O-sulfotransferase 2 protein-coding 626136234 Hey2 hes related family bHLH transcription factor with YRPW motif 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN anterior/posterior axis specification (ortholog); aortic valve morphogenesis (ortholog); arterial endothelial cell differentiation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH aortic valve disease (ortholog); Breast Neoplasms (ortholog); Brugada syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); transcription repressor complex (ortholog) 2 204883044 204893463 - 22301074;30032202 116892929 MODEL JAAIVD010000001;XM_032894864 XP_032750755 hairy/enhancer-of-split related with YRPW motif protein 2 protein-coding 626136243 LOC116910371 ligand-dependent nuclear receptor-interacting factor 1-like 1 206864199 206866021 + 116910371 MODEL JAAIVD010000025 pseudo 626136244 LOC116890557 small nucleolar RNA SNORA17 1 122019620 122019753 + 116890557 MODEL JAAIVD010000025;XR_004386731 snorna 626136247 Frs3 fibroblast growth factor receptor substrate 3 ENCODES a protein that exhibits fibroblast growth factor receptor binding (ortholog); identical protein binding (ortholog); INVOLVED IN fibroblast growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Zellweger syndrome (ortholog) 4 82172676 82187482 - 30032202 116899075 MODEL JAAIVD010000003;XM_032900563;XM_032900564;XM_032900565 XP_032756454;XP_032756455;XP_032756456 protein-coding 626136264 Mrps5 mitochondrial ribosomal protein S5 ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 5 106376978 106392503 + 22301074;30032202 116901938 MODEL JAAIVD010000023;XM_032904168 XP_032760059 28S ribosomal protein S5, mitochondrial protein-coding 626136280 Naa60 N-alpha-acetyltransferase 60, NatF catalytic subunit ENCODES a protein that exhibits histone H4 acetyltransferase activity (ortholog); protein homodimerization activity (ortholog); protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); N-terminal peptidyl-methionine acetylation (ortholog); N-terminal protein amino acid acetylation (ortholog); ASSOCIATED WITH Idiopathic Basal Ganglia Calcification 9 (ortholog); FOUND IN Golgi membrane (ortholog) 9 17940248 17960208 - 30032202 116910066 MODEL JAAIVD010000002;XM_032913878 XP_032769769 N-alpha-acetyltransferase 60 protein-coding 626136291 LOC116888434 major urinary protein-like 1 91468114 91471307 + 30032202 116888434 MODEL JAAIVD010000025;XM_032889711 XP_032745602 protein-coding 626136301 LOC116906521 U6 spliceosomal RNA 7 126846723 126846829 - 116906521 MODEL JAAIVD010000026;XR_004388743 snrna 626136304 Sycp1 synaptonemal complex protein 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); INVOLVED IN chiasma assembly (ortholog); homologous chromosome pairing at meiosis (ortholog); lateral element assembly (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); intracranial aneurysm (ortholog); pancreatic cancer (ortholog); FOUND IN autosome (ortholog); central element (ortholog); chromosome (ortholog) 3 55102978 55197546 + 22301074;30032202 116895785 MODEL JAAIVD010000012;XM_032896932 XP_032752823 protein-coding 626136335 Sec24d SEC24 homolog D, COPII component ENCODES a protein that exhibits SNARE binding (ortholog); zinc ion binding (ortholog); INVOLVED IN COPII-coated vesicle cargo loading (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Cole-Carpenter syndrome (ortholog); Cole-Carpenter Syndrome 2 (ortholog); epilepsy (ortholog); FOUND IN COPII vesicle coat (ortholog) 3 36450702 36550246 - 22301074;30032202 116896291 MODEL JAAIVD010000012;XM_032897372;XM_032897373 XP_032753263;XP_032753264 SEC24 homolog D, COPII coat complex component;protein transport protein Sec24D protein-coding 626136363 Pbk PDZ binding kinase ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); negative regulation of inflammatory response (ortholog); negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); polycystic ovary syndrome (ortholog); FOUND IN nucleus (ortholog) 12 58629991 58647349 - 22301074 116913802 MODEL JAAIVD010000007;XM_032918107;XM_032918108;XM_032918109 XP_032773998;XP_032773999;XP_032774000 lymphokine-activated killer T-cell-originated protein kinase protein-coding 626136380 Hps3 HPS3 biogenesis of lysosomal organelles complex 2 subunit 1 INVOLVED IN pigmentation (ortholog); ASSOCIATED WITH genetic disease (ortholog); hemorrhagic disease (ortholog); Hermansky-Pudlak syndrome (ortholog); FOUND IN BLOC-2 complex (ortholog); cytoplasm (ortholog) 3 134097142 134129729 + 30032202 116897001 MODEL JAAIVD010000012;XM_032898606;XM_032898607 XP_032754497;XP_032754498 Hermansky-Pudlak syndrome 3 protein protein-coding 626136403 Acaca acetyl-CoA carboxylase alpha ENCODES a protein that exhibits acetyl-CoA carboxylase activity (ortholog); biotin binding (ortholog); identical protein binding (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to prostaglandin E stimulus (ortholog); fatty acid biosynthetic process (ortholog); PARTICIPATES IN fatty acid biosynthetic pathway; Leigh disease pathway; malonic aciduria pathway; ASSOCIATED WITH Acetyl-Coa Carboxylase Deficiency (ortholog); atherosclerosis (ortholog); congestive heart failure (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); fibrillar center (ortholog) 9 86294022 86553521 - 22301074;30032202 116910580 MODEL JAAIVD010000002;XM_032914502 XP_032770393 acetyl-CoA carboxylase 1 protein-coding 626136463 LOC116910714 small nucleolar RNA SNORA17 9 44239183 44239314 + 116910714 MODEL JAAIVD010000002;XR_004389241 snorna 626136466 LOC116883222 igE-binding protein-like 14 52201394 52203093 + 22301074 116883222 MODEL JAAIVD010000009;XM_032884236 XP_032740127 protein-coding 626136470 Dsg4 desmoglein 4 ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN BMP signaling pathway (ortholog); cell-cell adhesion (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); hypotrichosis (ortholog); hypotrichosis 6 (ortholog); FOUND IN desmosome (ortholog) 15 23194442 23229440 - 22301074;30032202 116884674 MODEL JAAIVD010000010;XM_032885847 XP_032741738 desmoglein-4 protein-coding 626136488 LOC116900322 olfactory receptor 10AG1-like 5 64382660 64383640 - 22301074 116900322 MODEL JAAIVD010000023;XM_032902078 XP_032757969 protein-coding 626136491 LOC116889903 60S ribosomal protein L36-like 1 246235995 246246042 - 22301074;30032202 116889903 MODEL JAAIVD010000025;XM_032890727 XP_032746618 protein-coding 626136495 LOC116906564 tubulin-specific chaperone cofactor E-like protein 8 36912468 37056246 - 22301074;30032202 116906564 MODEL JAAIVD010000027;XM_032909277;XM_032909278;XM_032909279 XP_032765168;XP_032765169;XP_032765170 alpha-tectorin protein-coding 626136536 Dnajc28 DnaJ heat shock protein family (Hsp40) member C28 4 52983330 52986179 + 116898991 MODEL JAAIVD010000003;XM_032900431 XP_032756322 dnaJ homolog subfamily C member 28 protein-coding 626136542 Spem1 spermatid maturation 1 INVOLVED IN flagellated sperm motility (ortholog); sperm individualization (ortholog); spermatogenesis (ortholog); FOUND IN cytoplasm (ortholog) 9 49427892 49429809 - 30032202 116908599 MODEL JAAIVD010000002;XM_032911822 XP_032767713 spermatid maturation protein 1 protein-coding 626136549 LOC116900330 olfactory receptor 142-like 5 64554683 64555609 - 22301074 116900330 MODEL JAAIVD010000023;XM_032902087 XP_032757978 protein-coding 626136552 LOC116893246 histone H2A.Z-like 2 126763871 126799940 + 116893246 MODEL JAAIVD010000001 pseudo 626136553 Mgmt O-6-methylguanine-DNA methyltransferase ENCODES a protein that exhibits calcium ion binding (ortholog); methylated-DNA-[protein]-cysteine S-methyltransferase activity (ortholog); methyltransferase activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to oxidative stress (ortholog); DNA alkylation repair (ortholog); ASSOCIATED WITH Bile Duct Neoplasms (ortholog); Brain Neoplasms (ortholog); breast cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 64814975 64855572 - 22301074;30032202 116893105 MODEL JAAIVD010000001;XM_032895044 XP_032750935 methylated-DNA--protein-cysteine methyltransferase protein-coding 626136560 Acap2 ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,5-bisphosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN actin filament-based process (ortholog); cellular response to nerve growth factor stimulus (ortholog); endocytic recycling (ortholog); FOUND IN endosome membrane (ortholog); plasma membrane (ortholog); ruffle (ortholog) 4 16006345 16114235 - 22301074;30032202 116898752 MODEL JAAIVD010000003;XM_032900071 XP_032755962 arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein 2 protein-coding 626136587 Tm9sf1 transmembrane 9 superfamily member 1 12 69363244 69370756 + 22301074;30032202 116913148 MODEL JAAIVD010000007;XM_032917358;XM_032917359;XM_032917360 XP_032773249;XP_032773250;XP_032773251 protein-coding 626136603 Flnb filamin B ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to type II interferon (ortholog); epithelial cell morphogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH Atelosteogenesis Type 1 (ortholog); Atelosteogenesis Type 3 (ortholog); bone development disease (ortholog); FOUND IN brush border (ortholog); cytosol (ortholog); focal adhesion (ortholog) 12 78254522 78387730 + 30032202 116913742 MODEL JAAIVD010000007;XM_032918047;XM_032918048 XP_032773938;XP_032773939 filamin-B protein-coding 626136654 Hmmr hyaluronan mediated motility receptor ENCODES a protein that exhibits cargo receptor activity (ortholog); INVOLVED IN hyaluronan catabolic process (ortholog); receptor-mediated endocytosis (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); Breast Neoplasms (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 23638516 23668344 - 30032202 116909318 MODEL JAAIVD010000002;XM_032912853 XP_032768744 protein-coding 626136675 LOC116908247 uncharacterized LOC116908247 8 87929118 87964786 - 116908247 MODEL JAAIVD010000027;XM_032911503 XP_032767394 uncharacterized protein LOC116908247 protein-coding 626136688 Plekho1 pleckstrin homology domain containing O1 INVOLVED IN lamellipodium morphogenesis (ortholog); myoblast fusion (ortholog); myoblast migration (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); FOUND IN muscle cell projection membrane (ortholog); ruffle membrane (ortholog) 3 61287137 61295381 + 30032202 116896527 MODEL JAAIVD010000012;XM_032897708 XP_032753599 pleckstrin homology domain-containing family O member 1 protein-coding 626136698 Awat2 acyl-CoA wax alcohol acyltransferase 2 ENCODES a protein that exhibits long-chain-alcohol O-fatty-acyltransferase activity (ortholog); retinol O-fatty-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); wax biosynthetic process (ortholog); ASSOCIATED WITH dry eye syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) X 58155509 58163852 - 30032202 116889086 MODEL JAAIVD010000014;XM_032890261 XP_032746152 protein-coding 626136707 LOC116897326 prothymosin alpha 3 212614148 212615318 + 30032202 116897326 MODEL JAAIVD010000012;XM_032899080 XP_032754971 protein-coding 626136712 LOC116892584 paraneoplastic antigen-like protein 8C 2 172095343 172096201 - 116892584 MODEL JAAIVD010000001;XM_032894365 XP_032750256 protein-coding 626136717 Aurkb aurora kinase B ENCODES a protein that exhibits histone H3S28 kinase activity (ortholog); kinase binding (ortholog); protein kinase activity (ortholog); INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); cell cycle G2/M phase transition (ortholog); cellular response to UV (ortholog); ASSOCIATED WITH COVID-19 (ortholog); endometrial carcinoma (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromocenter (ortholog); chromosome (ortholog); chromosome passenger complex (ortholog) 9 48639522 48643817 + 22301074;30032202 116910302 MODEL JAAIVD010000002;XM_032914169 XP_032770060 protein-coding 626136728 LOC116893222 chymotrypsin-like elastase family member 2A 1 16327736 16337611 + 22301074;30032202 116893222 MODEL JAAIVD010000025;XM_032895105 XP_032750996 protein-coding 626136740 Casp9 caspase 9 ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to UV (ortholog); PARTICIPATES IN endometrial cancer pathway; intrinsic apoptotic pathway; phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); alcohol use disorder (ortholog); Alzheimer's disease (ortholog); FOUND IN apoptosome (ortholog); caspase complex (ortholog); cytoplasm (ortholog) 1 16337170 16355659 - 22301074;30032202 116893204 MODEL JAAIVD010000025;XM_032895097;XM_032895100 XP_032750988;XP_032750991 caspase-9 protein-coding 626136758 Pigo phosphatidylinositol glycan anchor biosynthesis class O ENCODES a protein that exhibits mannose-ethanolamine phosphotransferase activity (ortholog); INVOLVED IN GPI anchor biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hirschsprung's disease (ortholog); hyperphosphatasia with impaired intellectual development syndrome (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 3479900 3489202 + 22301074;30032202 116891193 MODEL JAAIVD010000025;XM_032892018 XP_032747909 GPI ethanolamine phosphate transferase 3 protein-coding 626136771 KEG97_t12 tRNA-Ser MT 6858 6926 - 64988251 trna 626136772 Zmym3 zinc finger MYM-type containing 3 INVOLVED IN cytoskeleton organization (ortholog); regulation of cell morphogenesis (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) X 59127744 59142614 + 22301074 116888412 MODEL JAAIVD010000014;XM_032889685 XP_032745576 zinc finger MYM-type protein 3 protein-coding 626136799 Cd22 CD22 molecule ENCODES a protein that exhibits CD4 receptor binding (ortholog); protein phosphatase binding (ortholog); sialic acid binding (ortholog); INVOLVED IN B cell activation (ortholog); negative regulation of B cell receptor signaling pathway (ortholog); negative regulation of calcium-mediated signaling (ortholog); ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); external side of plasma membrane (ortholog) 2 165136440 165151565 + 116893368 MODEL JAAIVD010000001;XM_032895169 XP_032751060 B-cell receptor CD22 protein-coding 626136817 LOC116897496 U1 spliceosomal RNA 3 200632975 200633134 + 116897496 MODEL JAAIVD010000012;XR_004387517 snrna 626136820 LOC116900437 olfactory receptor 4C15-like 5 70753583 70754548 - 22301074 116900437 MODEL JAAIVD010000023;XM_032902178 XP_032758069 protein-coding 626136824 LOC116904230 nucleoside diphosphate kinase B-like 6 155730604 155731018 - 116904230 MODEL JAAIVD010000024 pseudo 626136825 LOC116894445 major allergen I polypeptide chain 1-like 2 164754475 164755666 + 30032202 116894445 MODEL JAAIVD010000001;XM_032896147 XP_032752038 protein-coding 626136830 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 15 29048853 29048925 + 116885121 MODEL JAAIVD010000010 trna 626136831 Ephb3 EPH receptor B3 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); ephrin receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); axonal fasciculation (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH malaria (ortholog); FOUND IN plasma membrane (ortholog) 4 5876287 5895217 + 22301074;30032202 116898707 MODEL JAAIVD010000003;XM_032899997 XP_032755888 ephrin type-B receptor 3 protein-coding 626136851 LOC116890496 small nucleolar RNA SNORA48 1 97034630 97034768 + 116890496 MODEL JAAIVD010000025;XR_004386682 snorna 626136854 LOC116913819 translationally-controlled tumor protein-like 12 81409593 81410150 + 116913819 MODEL JAAIVD010000007 pseudo 626136855 LOC116895059 small nucleolar RNA SNORA17 2 18409798 18409915 + 116895059 MODEL JAAIVD010000001 pseudo 626136856 Ptov1 PTOV1 extended AT-hook containing adaptor protein ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog) 2 154672594 154680014 + 30032202 116892187 MODEL JAAIVD010000001;XM_032893711 XP_032749602 prostate tumor-overexpressed gene 1 protein protein-coding 626136872 LOC116913877 60S ribosomal protein L35-like 12 13648079 13726605 - 116913877 MODEL JAAIVD010000007 pseudo 626136873 LOC116897336 ubiquitin-conjugating enzyme E2 L3-like 3 215003416 215003879 + 116897336 MODEL JAAIVD010000012 pseudo 626136874 LOC116892341 zinc finger protein 383-like 2 166125685 166136640 - 30032202 116892341 MODEL JAAIVD010000001;XM_032893980;XM_032893981 XP_032749871;XP_032749872 protein-coding 626136887 LOC116913155 branchpoint-bridging protein-like 12 44858721 44859787 + 116913155 MODEL JAAIVD010000007;XM_032917363 XP_032773254 protein-coding 626136892 Mb myoglobin ENCODES a protein that exhibits nitrite reductase activity (ortholog); oxygen binding (ortholog); oxygen carrier activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cellular response to nitric oxide (ortholog); cold acclimation (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); alcohol use disorder (ortholog); amphetamine abuse (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); sarcoplasm (ortholog) 1 249357584 249365001 - 22301074;30032202 116913538 MODEL JAAIVD010000025;XM_032917739 XP_032773630 protein-coding 626136899 LOC116886982 putative glutathione-specific gamma-glutamylcyclotransferase 2 18 44500673 44501182 - 116886982 MODEL JAAIVD010000013 pseudo 626136900 LOC116891883 U1 small nuclear ribonucleoprotein C-like 2 116662303 116662781 - 116891883 MODEL JAAIVD010000001 pseudo 626136901 LOC116894582 caspase-3-like 2 180379574 180380406 + 22301074;30032202 116894582 MODEL JAAIVD010000001;XM_032896303 XP_032752194 protein-coding 626136904 Cib4 calcium and integrin binding family member 4 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog) 7 23534518 23596702 + 22301074 116905922 MODEL JAAIVD010000026;XM_032908913 XP_032764804 calcium and integrin-binding family member 4 protein-coding 626136913 Adora2a adenosine A2a receptor ENCODES a protein that exhibits alpha-actinin binding (ortholog); calmodulin binding (ortholog); enzyme binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); astrocyte activation (ortholog); eating behavior (ortholog); PARTICIPATES IN adenosine signaling pathway; hypoxia inducible factor pathway; ASSOCIATED WITH amphetamine abuse (ortholog); anxiety disorder (ortholog); asthma (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); axon (ortholog) 18 12103177 12112112 - 22301074;30032202 116887349 MODEL JAAIVD010000013;XM_032888942 XP_032744833 adenosine receptor A2a protein-coding 626136919 LOC116887885 melanoma-associated antigen B5-like X 49902755 49903783 + 30032202 116887885 MODEL JAAIVD010000014;XM_032889367 XP_032745258 protein-coding 626136922 LOC116890512 small nucleolar RNA SNORA48 1 195435779 195435920 - 116890512 MODEL JAAIVD010000025;XR_004386695 snorna 626136925 Tbck TBC1 domain containing kinase INVOLVED IN actin cytoskeleton organization (ortholog); cell population proliferation (ortholog); regulation of TOR signaling (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); infantile hypotonia with psychomotor retardation and characteristic facies-3 (ortholog); FOUND IN cytoplasm (ortholog); midbody (ortholog); mitotic spindle (ortholog) 3 26081135 26234450 - 22301074 116896237 MODEL JAAIVD010000012;XM_032897303 XP_032753194 TBC domain-containing protein kinase-like protein protein-coding 626136955 LOC116894517 vomeronasal type-1 receptor 4-like 2 174887830 174888876 + 22301074;30032202 116894517 MODEL JAAIVD010000001;XM_032896219 XP_032752110 protein-coding 626136959 Slc1a6 solute carrier family 1 member 6 ENCODES a protein that exhibits glutamate:sodium symporter activity (ortholog); high-affinity L-glutamate transmembrane transporter activity (ortholog); L-aspartate transmembrane transporter activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); L-aspartate import across plasma membrane (ortholog); L-glutamate import across plasma membrane (ortholog); FOUND IN glutamatergic synapse (ortholog); Golgi apparatus (ortholog); intermediate filament cytoskeleton (ortholog) 1 156775070 156803164 + 30032202 116906729 MODEL JAAIVD010000025;XM_032909543;XM_032909552 XP_032765434;XP_032765443 excitatory amino acid transporter 4 protein-coding 626136976 LOC116910906 SH2 domain-containing protein 1B2-like 10 49417920 49439323 + 116910906 MODEL JAAIVD010000005;XM_032914668 XP_032770559 protein-coding 626136983 B3gat1 beta-1,3-glucuronyltransferase 1 ENCODES a protein that exhibits galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); glycosaminoglycan biosynthetic process (ortholog); visual learning (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Familial Prostate Cancer (ortholog); metabolic dysfunction-associated steatotic liver disease (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi membrane (ortholog) 8 22514156 22523584 + 22301074;30032202 116906692 MODEL JAAIVD010000027;XM_032909482;XM_032909483 XP_032765373;XP_032765374 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 protein-coding 626136996 LOC116913414 uncharacterized LOC116913414 12 87491673 87494872 + 116913414 MODEL JAAIVD010000007;XM_032917599 XP_032773490 uncharacterized protein LOC116913414 protein-coding 626137004 Slc45a1 solute carrier family 45 member 1 ENCODES a protein that exhibits D-glucose:proton symporter activity (ortholog); galactose:proton symporter activity (ortholog); INVOLVED IN D-glucose transmembrane transport (ortholog); galactose transmembrane transport (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH NEUROPSYCHIATRIC FEATURES (ortholog) 1 10102068 10126227 + 22301074;30032202 116892464 MODEL JAAIVD010000025;XM_032894184;XM_032894193 XP_032750075;XP_032750084 proton-associated sugar transporter A protein-coding 626137020 LOC116887993 fructose-bisphosphate aldolase A-like X 73090112 73092283 + 116887993 MODEL JAAIVD010000014 pseudo 626137021 Ntn1 netrin 1 INVOLVED IN anterior/posterior axon guidance (ortholog); axon guidance (ortholog); axonogenesis (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); brain edema (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN actin cytoskeleton (ortholog); basement membrane (ortholog); cytoplasm (ortholog) 9 47808132 47876066 - 22301074 116910298 MODEL JAAIVD010000002;XM_032914167 XP_032770058 netrin-1 protein-coding 626137030 Mindy1 MINDY lysine 48 deubiquitinase 1 ENCODES a protein that exhibits cysteine-type carboxypeptidase activity (ortholog); K48-linked deubiquitinase activity (ortholog); K48-linked polyubiquitin modification-dependent protein binding (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog) 3 61951427 61965495 - 22301074;30032202 116896557 MODEL JAAIVD010000012;XM_032897750 XP_032753641 ubiquitin carboxyl-terminal hydrolase MINDY-1 protein-coding 626137047 Ppp2r5c protein phosphatase 2 regulatory subunit B'gamma ENCODES a protein that exhibits peptidase activity (ortholog); protein phosphatase regulator activity (ortholog); INVOLVED IN DNA damage response, signal transduction by p53 class mediator (ortholog); intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (ortholog); negative regulation of cell population proliferation (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 41 (ortholog); B-Cell Chronic Lymphocytic Leukemia (ortholog); Chromosomal Instability (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 7 128014299 128148960 + 22301074;30032202 116905471 MODEL JAAIVD010000026;XM_032908434;XM_032908435;XM_032908436;XM_032908437;XM_032908439;XM_032908440;XM_032908441;XM_032908442;XM_032908443 XP_032764325;XP_032764326;XP_032764327;XP_032764328;XP_032764330;XP_032764331;XP_032764332;XP_032764333;XP_032764334 serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform protein-coding 626137087 Gata4 GATA binding protein 4 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); co-SMAD binding (ortholog); INVOLVED IN aortic valve morphogenesis (ortholog); atrial septum morphogenesis (ortholog); atrial septum primum morphogenesis (ortholog); ASSOCIATED WITH 46,XY sex reversal 3 (ortholog); alcohol use disorder (ortholog); Animal Disease Models (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleus (ortholog) 12 61134062 61180630 + 22301074;30032202 116913455 MODEL JAAIVD010000007;XM_032917655;XM_032917656 XP_032773546;XP_032773547 transcription factor GATA-4 protein-coding 626137101 Srgap3 SLIT-ROBO Rho GTPase activating protein 3 INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Chromosome 3, Monosomy 3p25 (ortholog); intellectual disability (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog) 6 33597277 33822679 + 22301074;30032202 116903430 MODEL JAAIVD010000024;XM_032905978;XM_032905979 XP_032761869;XP_032761870 SLIT-ROBO Rho GTPase-activating protein 3 protein-coding 626137129 Pnp purine nucleoside phosphorylase ENCODES a protein that exhibits identical protein binding (ortholog); nucleoside binding (ortholog); phosphate ion binding (ortholog); INVOLVED IN allantoin metabolic process (ortholog); dAMP catabolic process (ortholog); deoxyadenosine catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Arsenic Poisoning (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); extracellular region (ortholog) 12 72357514 72365236 - 22301074;30032202 116913614 MODEL JAAIVD010000007;XM_032917866 XP_032773757 protein-coding 626137139 LOC116888305 heat shock cognate 71 kDa protein-like 1 84933879 84935746 + 116888305 MODEL JAAIVD010000025 pseudo 626137140 LOC116898212 40S ribosomal protein S27-like 4 141404591 141404815 + 116898212 MODEL JAAIVD010000003 pseudo 626137141 LOC116913126 bcl-2-like protein 2 12 70104836 70109723 - 30032202 116913126 MODEL JAAIVD010000007;XM_032917285;XM_032917286;XM_032917287 XP_032773176;XP_032773177;XP_032773178 protein-coding 626137155 LOC116904581 AN1-type zinc finger protein 6-like 6 20911921 20912564 + 116904581 MODEL JAAIVD010000024 pseudo 626137156 Srsf2 serine and arginine rich splicing factor 2 ENCODES a protein that exhibits pre-mRNA binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); response to vitamin E (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cytosol (ortholog); interchromatin granule (ortholog); nuclear speck (ortholog) 9 67228156 67231366 + 22301074 116910056 MODEL JAAIVD010000002;XM_032913859;XM_032913860;XM_032913861;XR_004389126;XR_004389127;XR_004389128;XR_004389129 XP_032769750;XP_032769751;XP_032769752 serine/arginine-rich splicing factor 2 protein-coding 626137176 LOC116910141 uncharacterized LOC116910141 9 51667586 51669172 + 116910141 MODEL JAAIVD010000002;XR_004389137 ncrna 626137180 LOC116897971 carbonyl reductase [NADPH] 1-like 4 50971313 50977556 - 30032202 116897971 MODEL JAAIVD010000003;XM_032899371;XM_032899372 XP_032755262;XP_032755263 protein-coding 626137190 Ms4a15 membrane spanning 4-domains A15 2 10460758 10474053 - 30032202 116893640 MODEL JAAIVD010000001;XM_032895354;XM_032895355 XP_032751245;XP_032751246 membrane-spanning 4-domains subfamily A member 15 protein-coding 626137203 LOC116895980 baculoviral IAP repeat-containing protein 1f-like 3 157749775 157777839 - 30032202 116895980 MODEL JAAIVD010000012;XM_032897016 XP_032752907 protein-coding 626137220 LOC116889325 ubiquitin-conjugating enzyme E2 D3-like X 689377 689805 - 116889325 MODEL JAAIVD010000014 pseudo 626137221 Ints7 integrator complex subunit 7 INVOLVED IN cellular response to ionizing radiation (ortholog); DNA damage checkpoint signaling (ortholog); RNA polymerase II transcription initiation surveillance (ortholog); FOUND IN chromosome (ortholog); cytoplasm (ortholog); INTAC complex (ortholog) 10 69665604 69719648 + 30032202 116911055 MODEL JAAIVD010000005;XM_032914808 XP_032770699 protein-coding 626137245 Fam117a family with sequence similarity 117 member A 9 59005755 59049544 - 116909751 MODEL JAAIVD010000002;XM_032913431 XP_032769322 protein FAM117A protein-coding 626137256 LOC116898004 60S ribosomal protein L27-like 4 63293204 63293647 - 22301074;30032202 116898004 MODEL JAAIVD010000003;XM_032899400 XP_032755291 protein-coding 626137260 LOC116911567 uncharacterized LOC116911567 10 50755363 50761603 + 116911567 MODEL JAAIVD010000005;XR_004389329 ncrna 626137264 LOC116900044 glyceraldehyde-3-phosphate dehydrogenase-like 1 108906154 108906720 + 116900044 MODEL JAAIVD010000025 pseudo 626137265 LOC116889831 small nucleolar RNA SNORD50 116889831 MODEL JAAIVD010001547;XR_004386514 snorna 626137266 Tyrobp transmembrane immune signaling adaptor TYROBP ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); amyloid-beta clearance (ortholog); apoptotic cell clearance (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); liver disease (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog) 2 165586803 165591263 - 30032202 116894462 MODEL JAAIVD010000001;XM_032896171;XM_032896172 XP_032752062;XP_032752063 TYRO protein tyrosine kinase-binding protein protein-coding 626137277 LOC116908585 tubulin alpha-1C chain-like 1 178466135 178467046 - 116908585 MODEL JAAIVD010000025 pseudo 626137278 LOC116912041 glyceraldehyde-3-phosphate dehydrogenase-like 11 82329104 82330108 + 116912041 MODEL JAAIVD010000006 pseudo 626137279 Adamtsl3 ADAMTS like 3 ASSOCIATED WITH lung adenocarcinoma (ortholog); squamous cell carcinoma (ortholog) 2 117658081 117949669 - 22301074;30032202 116891891 MODEL JAAIVD010000001;XM_032893300 XP_032749191 ADAMTS-like protein 3 protein-coding 626137313 Oxgr1 oxoglutarate receptor 1 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN phospholipase C-activating G protein-coupled receptor signaling pathway (ortholog); phospholipase C-activating serotonin receptor signaling pathway (ortholog); ASSOCIATED WITH Calcium Oxalate Nephrolithiasis 2 with Nephrocalcinosis (ortholog); Otitis Media with Effusion (ortholog); FOUND IN plasma membrane (ortholog) 12 4746707 4787074 + 22301074;30032202 116914079 MODEL JAAIVD010000007;XM_032918385 XP_032774276 2-oxoglutarate receptor 1 protein-coding 626137318 Lrrc2 leucine rich repeat containing 2 INVOLVED IN cellular response to leukemia inhibitory factor (ortholog) 8 101534981 101561670 + 22301074 116907120 MODEL JAAIVD010000027;XM_032910093 XP_032765984 leucine-rich repeat-containing protein 2 protein-coding 626137331 LOC116904382 disabled homolog 2-interacting protein-like 6 92072503 92087126 + 116904382 MODEL JAAIVD010000024 pseudo 626137332 Hoxa3 homeobox A3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); HMG box domain binding (ortholog); INVOLVED IN angiogenesis (ortholog); animal organ formation (ortholog); animal organ morphogenesis (ortholog); ASSOCIATED WITH congenital heart disease (ortholog); Craniofacial Abnormalities (ortholog); DiGeorge syndrome (ortholog); FOUND IN nucleoplasm (ortholog) 6 88849477 88893526 + 22301074;30032202 116903803 MODEL JAAIVD010000024;XM_032906498;XM_032906499;XM_032906500;XM_032906501 XP_032762389;XP_032762390;XP_032762391;XP_032762392 homeobox protein Hox-A3 protein-coding 626137349 LOC116897623 small nucleolar RNA SNORD72 3 175203512 175203591 - 116897623 MODEL JAAIVD010000012;XR_004387604 snorna 626137352 LOC116885657 forkhead box protein E1-like 1 173199 174334 - 116885657 MODEL JAAIVD010000025 pseudo 626137353 LOC116912401 zinc finger protein 54-like 11 96640409 96654107 - 30032202 116912401 MODEL JAAIVD010000006;XM_032916459 XP_032772350 protein-coding 626137362 LOC116892564 WD repeat-containing protein 13-like 2 171809548 171811008 - 116892564 MODEL JAAIVD010000001 pseudo 626137363 Slc43a2 solute carrier family 43 member 2 ENCODES a protein that exhibits L-amino acid transmembrane transporter activity (ortholog); L-isoleucine transmembrane transporter activity (ortholog); L-leucine transmembrane transporter activity (ortholog); INVOLVED IN isoleucine transport (ortholog); L-amino acid transport (ortholog); L-leucine transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 9 94246929 94286574 + 22301074;30032202 116908747 MODEL JAAIVD010000002;XM_032912100 XP_032767991 large neutral amino acids transporter small subunit 4 protein-coding 626137382 LOC116911634 selenoprotein K-like 10 77590139 77590529 + 116911634 MODEL JAAIVD010000005 pseudo 626137383 Pik3c2a phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha ENCODES a protein that exhibits 1-phosphatidylinositol-3-kinase activity (ortholog); 1-phosphatidylinositol-4,5-bisphosphate 3-kinase activity (ortholog); 1-phosphatidylinositol-4-phosphate 3-kinase activity (ortholog); INVOLVED IN autophagosome organization (ortholog); cellular response to starvation (ortholog); endocytosis (ortholog); PARTICIPATES IN phosphoinositide metabolic pathway; ASSOCIATED WITH Dwarfism (ortholog); Oculoskeletodental Syndrome (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN clathrin-coated vesicle (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 85134954 85241585 + 22301074;30032202 116891622 MODEL JAAIVD010000001;XM_032892828;XM_032892829 XP_032748719;XP_032748720 phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha protein-coding 626137425 Eif2b3 eukaryotic translation initiation factor 2B subunit gamma ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); translation factor activity, RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN cytoplasmic translational initiation (ortholog); hippocampus development (ortholog); oligodendrocyte development (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH genetic disease (ortholog); Leukoencephalopathies (ortholog); leukoencephalopathy with vanishing white matter (ortholog); FOUND IN cytoplasm (ortholog); eukaryotic translation initiation factor 2B complex (ortholog) 1 40647828 40711199 + 22301074;30032202 116898579 MODEL JAAIVD010000025;XM_032899782;XM_032899785;XM_032899790;XM_032899795 XP_032755673;XP_032755676;XP_032755681;XP_032755686 translation initiation factor eIF-2B subunit gamma protein-coding 626137451 Mul1 mitochondrial E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits identical protein binding (ortholog); p53 binding (ortholog); SUMO transferase activity (ortholog); INVOLVED IN cellular response to exogenous dsRNA (ortholog); mitochondrial fission (ortholog); mitochondrion localization (ortholog); FOUND IN axon (ortholog); mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 1 19779817 19786302 - 22301074;30032202 116893853 MODEL JAAIVD010000025;XM_032895576 XP_032751467 mitochondrial ubiquitin ligase activator of NFKB 1 protein-coding 626137459 LOC116889603 mediator of RNA polymerase II transcription subunit 14-like Y 1479677 1484504 - 22301074;30032202 116889603 MODEL JAAIVD010000015;XM_032890534 XP_032746425 protein-coding 626137464 Cdh8 cadherin 8 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); regulation of synapse organization (ortholog); response to cold (ortholog); FOUND IN axon terminus (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 17 7655726 8041524 - 22301074;30032202;9521872 116886668 MODEL AB010436;AB010437;JAAIVD010000011;XM_032888162 BAA24452;BAA24453;XP_032744053 cadherin-8;rCdh8;rCdh8-a1 protein-coding 626137480 LOC116900335 elongation factor 1-gamma-like 5 65107498 65108799 + 116900335 MODEL JAAIVD010000023 pseudo 626137481 LOC116889642 50S ribosomal protein L11-like 22301074;30032202 116889642 MODEL JAAIVD010000038;XM_032890549 XP_032746440 protein-coding 626137482 Slc27a6 solute carrier family 27 member 6 ENCODES a protein that exhibits very long-chain fatty acid-CoA ligase activity (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); myocardial infarction (ortholog) 15 73208131 73261081 - 30032202 116884715 MODEL JAAIVD010000010;XM_032885901 XP_032741792 long-chain fatty acid transport protein 6 protein-coding 626137496 LOC116913766 60S ribosomal protein L5-like 12 13500857 13502105 - 116913766 MODEL JAAIVD010000007 pseudo 626137497 LOC116895746 rho GTPase-activating protein 20-like 3 35385816 35410114 + 22301074;30032202 116895746 MODEL JAAIVD010000012;XM_032896916 XP_032752807 protein-coding 626137510 LOC116902996 metalloreductase STEAP4 6 139372464 139393437 - 30032202 116902996 MODEL JAAIVD010000024;XM_032905310 XP_032761201 protein-coding 626137519 LOC116898158 thymosin beta-10-like 4 119421659 119421927 - 116898158 MODEL JAAIVD010000003 pseudo 626137520 LOC116886610 40S ribosomal protein S11-like 17 31794635 31795113 + 116886610 MODEL JAAIVD010000011 pseudo 626137521 Abhd3 abhydrolase domain containing 3, phospholipase ENCODES a protein that exhibits phospholipase A1 activity (ortholog); phospholipase A2 activity (ortholog); INVOLVED IN phosphatidylcholine metabolic process (ortholog) 15 33417121 33470037 + 30032202 116884511 MODEL JAAIVD010000010;XM_032885641 XP_032741532 phospholipase ABHD3 protein-coding 626137534 Syt17 synaptotagmin 17 INVOLVED IN positive regulation of dendrite extension (ortholog); regulation of postsynaptic neurotransmitter receptor internalization (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); trans-Golgi network (ortholog) 2 83205977 83272539 + 22301074;30032202 116891612 MODEL JAAIVD010000001;XM_032892812;XM_032892814;XM_032892815;XM_032892816;XM_032892817;XM_032892818 XP_032748703;XP_032748705;XP_032748706;XP_032748707;XP_032748708;XP_032748709 synaptotagmin-17 protein-coding 626137562 LOC116886620 disks large homolog 5-like 17 14797570 14802045 - 116886620 MODEL JAAIVD010000011 pseudo 626137563 Enox2 ecto-NOX disulfide-thiol exchanger 2 INVOLVED IN electron transport chain (ortholog); ultradian rhythm (ortholog); ASSOCIATED WITH disease of cellular proliferation (ortholog); malignant mesothelioma (ortholog); FOUND IN external side of plasma membrane (ortholog) X 113682661 113863160 - 30032202 116888159 MODEL JAAIVD010000014;XM_032889483 XP_032745374 protein-coding 626137576 LOC116887361 sodium-dependent glucose transporter 1C-like 18 39718266 39726252 - 116887361 MODEL JAAIVD010000013;XM_032888954 XP_032744845 protein-coding 626137585 Psat1 phosphoserine aminotransferase 1 ENCODES a protein that exhibits identical protein binding (ortholog); O-phospho-L-serine:2-oxoglutarate aminotransferase activity (ortholog); INVOLVED IN L-serine biosynthetic process (ortholog); PARTICIPATES IN dihydropyrimidine dehydrogenase deficiency pathway; dimethylglycine dehydrogenase deficiency pathway; nonketotic hyperglycinemia pathway; ASSOCIATED WITH Animal Disease Models (ortholog); genetic disease (ortholog); High Myopia (ortholog); FOUND IN cytosol (ortholog) 2 15845642 15867224 - 22301074;30032202 116891000 MODEL JAAIVD010000001;XM_032891680 XP_032747571 phosphoserine aminotransferase protein-coding 626137598 Ino80b INO80 complex subunit B INVOLVED IN chromatin remodeling (ortholog); positive regulation of DNA repair (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN Ino80 complex (ortholog); nuclear body (ortholog); nucleolus (ortholog) 6 63100033 63106286 + 22301074;30032202 116903625 MODEL JAAIVD010000024;XM_032906282 XP_032762173 protein-coding 626137610 LOC116912507 uncharacterized LOC116912507 11 10720220 10737097 + 116912507 MODEL JAAIVD010000006;XR_004389466 ncrna 626137615 Itgb1bp1 integrin subunit beta 1 binding protein 1 ENCODES a protein that exhibits GDP-dissociation inhibitor activity (ortholog); integrin binding (ortholog); kinase binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel diameter maintenance (ortholog); blood vessel endothelial cell proliferation involved in sprouting angiogenesis (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH bone development disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cell periphery (ortholog); centriolar satellite (ortholog); cytoplasm (ortholog) 7 37812762 37827192 - 30032202 116904906 MODEL JAAIVD010000026;XM_032907515;XM_032907516 XP_032763406;XP_032763407 integrin beta-1-binding protein 1 protein-coding 626137628 LOC116901756 rho GTPase-activating protein 11A-like 5 92037128 92053895 - 22301074 116901756 MODEL JAAIVD010000023;XM_032903893 XP_032759784 protein-coding 626137644 LOC116896472 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 4 3 58600661 58610115 - 22301074 116896472 MODEL JAAIVD010000012;XM_032897634;XM_032897635 XP_032753525;XP_032753526 3 beta-hydroxysteroid dehydrogenase/Delta 5-->4-isomerase type 1 protein-coding 626137655 Hipk3 homeodomain interacting protein kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN mRNA transcription (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of JUN kinase activity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear body (ortholog) 5 82339085 82408024 - 22301074;30032202 116901702 MODEL JAAIVD010000023;XM_032903830 XP_032759721 homeodomain-interacting protein kinase 3 protein-coding 626137675 LOC116904323 60S ribosomal protein L27-like 6 62453132 62460490 + 116904323 MODEL JAAIVD010000024 pseudo 626137676 LOC116894721 eukaryotic initiation factor 4A-I-like 2 21941226 21943523 + 116894721 MODEL JAAIVD010000001 pseudo 626137677 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42428951 42429034 - 116884180 MODEL JAAIVD010000009 trna 626137678 LOC116887170 uncharacterized LOC116887170 18 41865347 41866846 - 116887170 MODEL JAAIVD010000013;XR_004386202 ncrna 626137682 LOC116900644 olfactory receptor 1J4-like 5 14607714 14608661 + 22301074 116900644 MODEL JAAIVD010000023;XM_032902354 XP_032758245 protein-coding 626137685 LOC116898328 mitogen-activated protein kinase 3-like 4 42221825 42238511 + 22301074;30032202 116898328 MODEL JAAIVD010000003;XM_032899659 XP_032755550 protein-coding 626137690 Fbxl18 F-box and leucine rich repeat protein 18 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 16 10249636 10272626 + 22301074;30032202 116885750 MODEL JAAIVD010000004;XM_032887062;XM_032887063;XM_032887064 XP_032742953;XP_032742954;XP_032742955 F-box/LRR-repeat protein 18 protein-coding 626137708 Plekhb2 pleckstrin homology domain containing B2 ENCODES a protein that exhibits phosphatidylinositol-3,4,5-trisphosphate binding (ortholog) 4 111066562 111099919 + 30032202 116899281 MODEL JAAIVD010000003;XM_032900913 XP_032756804 pleckstrin homology domain-containing family B member 2 protein-coding 626137720 Atp8a1 ATPase phospholipid transporting 8A1 ENCODES a protein that exhibits phosphatidylserine flippase activity (ortholog); INVOLVED IN aminophospholipid translocation (ortholog); learning (ortholog); positive regulation of cell migration (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 11 24729120 24956984 - 22301074;30032202 116911927 MODEL JAAIVD010000006;XM_032915813;XM_032915815;XM_032915816;XM_032915817;XM_032915818 XP_032771704;XP_032771706;XP_032771707;XP_032771708;XP_032771709 phospholipid-transporting ATPase IA protein-coding 626137769 LOC116911981 40S ribosomal protein S4, X isoform-like 11 43470350 43470990 - 116911981 MODEL JAAIVD010000006 pseudo 626137770 LOC116893856 olfactory receptor 13G1-like 2 61468956 61469873 - 22301074 116893856 MODEL JAAIVD010000001;XM_032895575 XP_032751466 protein-coding 626137773 Antxrl ANTXR like 13 9819099 9842144 + 22301074 116914937 MODEL JAAIVD010000008;XM_032919363 XP_032775254 anthrax toxin receptor-like protein-coding 626137793 Ppox protoporphyrinogen oxidase ENCODES a protein that exhibits oxygen-dependent protoporphyrinogen oxidase activity (ortholog); INVOLVED IN heme A biosynthetic process (ortholog); heme B biosynthetic process (ortholog); heme biosynthetic process (ortholog); PARTICIPATES IN acute intermittent porphyria pathway; erythropoietic porphyria pathway; heme biosynthetic pathway; ASSOCIATED WITH acute intermittent porphyria (ortholog); Colorectal Neoplasms (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial intermembrane space (ortholog); mitochondrial membrane (ortholog) 10 50441914 50446077 - 22301074;30032202 116911157 MODEL JAAIVD010000005;XM_032915019 XP_032770910 protein-coding 626137810 LOC116897465 U7 small nuclear RNA 3 150204118 150204180 - 116897465 MODEL JAAIVD010000012;XR_004387493 snrna 626137813 Ift172 intraflagellar transport 172 ENCODES a protein that exhibits transcription factor binding (ortholog); INVOLVED IN bone development (ortholog); brain development (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); atrioventricular septal defect (ortholog); FOUND IN cilium (ortholog); intraciliary transport particle B (ortholog); sperm cytoplasmic droplet (ortholog) 7 22789033 22827190 + 22301074;30032202 116905972 MODEL JAAIVD010000026;XM_032908979;XM_032908980;XR_004388581 XP_032764870;XP_032764871 intraflagellar transport protein 172 homolog protein-coding 626137872 Hao2 hydroxyacid oxidase 2 ENCODES a protein that exhibits (S)-2-hydroxy-acid oxidase activity (ortholog); FMN binding (ortholog); identical protein binding (ortholog); INVOLVED IN fatty acid oxidation (ortholog); mandelate metabolic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) 3 58678837 58704499 - 22301074 116896474 MODEL JAAIVD010000012;XM_032897637;XM_032897638;XM_032897639;XM_032897640 XP_032753528;XP_032753529;XP_032753530;XP_032753531 protein-coding 626137892 LOC116909972 uncharacterized LOC116909972 9 86157685 86168772 - 116909972 MODEL JAAIVD010000002;XR_004389117;XR_004389118 ncrna 626137899 Klk9 kallikrein related peptidase 9 2 155596136 155600448 - 22301074 116892227 MODEL JAAIVD010000001;XM_032893793 XP_032749684 kallikrein-9 protein-coding 626137908 Foxj2 forkhead box J2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN male meiosis I (ortholog); negative regulation of angiogenesis (ortholog); negative regulation of blood vessel endothelial cell differentiation (ortholog); FOUND IN fibrillar center (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 6 24257875 24284655 - 30032202 116903307 MODEL JAAIVD010000024;XM_032905734;XM_032905735 XP_032761625;XP_032761626 forkhead box protein J2 protein-coding 626137926 LOC116903006 vomeronasal type-1 receptor 94-like 6 146674862 146675864 + 22301074;30032202 116903006 MODEL JAAIVD010000024;XM_032905318 XP_032761209 protein-coding 626137930 LOC116897728 40S ribosomal protein S8-like 4 87219883 87221344 - 116897728 MODEL JAAIVD010000003 pseudo 626137931 LOC116894187 olfactory receptor 477-like 2 106036358 106037283 + 116894187 MODEL JAAIVD010000001 pseudo 626137932 LOC116900445 olfactory receptor 4C15-like 5 70912861 70913799 - 22301074 116900445 MODEL JAAIVD010000023;XM_032902186 XP_032758077 protein-coding 626137936 Uap1 UDP-N-acetylglucosamine pyrophosphorylase 1 ENCODES a protein that exhibits carbohydrate binding (ortholog); identical protein binding (ortholog); protein serine pyrophosphorylase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); positive regulation of type I interferon production (ortholog); UDP-N-acetylglucosamine metabolic process (ortholog); PARTICIPATES IN amino sugar metabolic pathway; french type sialuria pathway; hexosamine biosynthetic pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 10 49330389 49363274 - 30032202 116911048 MODEL JAAIVD010000005;XM_032914797;XM_032914798;XM_032914800 XP_032770688;XP_032770689;XP_032770691 UDP-N-acetylhexosamine pyrophosphorylase protein-coding 626137958 Lctl lactase like INVOLVED IN lens morphogenesis in camera-type eye (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN brush border (ortholog); endoplasmic reticulum (ortholog) 8 58426841 58447184 + 22301074;30032202 116907460 MODEL JAAIVD010000027;XM_032910446 XP_032766337 lactase-like protein protein-coding 626137974 LOC116904357 non-POU domain-containing octamer-binding protein-like 6 77511085 77512483 + 116904357 MODEL JAAIVD010000024 pseudo 626137975 LOC116906123 40S ribosomal protein SA-like 7 85243571 85286994 - 116906123 MODEL JAAIVD010000026 pseudo 626137976 Vgf VGF nerve growth factor inducible ENCODES a protein that exhibits neuropeptide hormone activity (ortholog); INVOLVED IN generation of precursor metabolites and energy (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH gastric ulcer (ortholog); Hyperphagia (ortholog); obesity (ortholog); FOUND IN cytoplasmic vesicle (ortholog); extracellular space (ortholog); glutamatergic synapse (ortholog) 16 16984299 16987556 - 30032202 116885629 MODEL JAAIVD010000004;XM_032886932;XM_032886933 XP_032742823;XP_032742824 neurosecretory protein VGF protein-coding 626137985 Fggy FGGY carbohydrate kinase domain containing INVOLVED IN carbohydrate phosphorylation (ortholog); neuron cellular homeostasis (ortholog); ASSOCIATED WITH obesity (ortholog); Weight Gain (ortholog) 1 58414928 58779835 + 22301074 116900130 MODEL JAAIVD010000025;XM_032901907 XP_032757798 FGGY carbohydrate kinase domain-containing protein protein-coding 626138005 Opn1sw opsin 1, short wave sensitive INVOLVED IN cellular response to UV-A (ortholog); PARTICIPATES IN retinoid cycle metabolic pathway; visual phototransduction pathway; ASSOCIATED WITH atrial fibrillation (ortholog); blue color blindness (ortholog); FOUND IN cell body (ortholog); cone photoreceptor outer segment (ortholog); perinuclear region of cytoplasm (ortholog) 6 110185066 110188237 + 22301074;30032202 116902914 MODEL JAAIVD010000024;XM_032905240 XP_032761131 short-wave-sensitive opsin 1 protein-coding 626138014 LOC116904493 translation initiation factor IF-2-like 6 152885008 152886574 - 116904493 MODEL JAAIVD010000024;XM_032907290 XP_032763181 protein-coding 626138019 Rdx radixin ENCODES a protein that exhibits actin binding (ortholog); ATPase binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN apical protein localization (ortholog); barbed-end actin filament capping (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 24 (ortholog); cholestasis (ortholog); FOUND IN adherens junction (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 8 46057125 46114542 + 22301074;30032202 116906554 MODEL JAAIVD010000027;XM_032909269;XM_032909270 XP_032765160;XP_032765161 protein-coding 626138044 LOC116895162 40S ribosomal protein S19-like 3 38566723 38568829 - 116895162 MODEL JAAIVD010000012 pseudo 626138045 LOC116895482 arylacetamide deacetylase-like 2 3 95164371 95203997 - 22301074 116895482 MODEL JAAIVD010000012;XM_032896742;XM_032896743 XP_032752633;XP_032752634 protein-coding 626138054 Ogg1 8-oxoguanine DNA glycosylase ENCODES a protein that exhibits 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity (ortholog); damaged DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to cadmium ion (ortholog); cellular response to reactive oxygen species (ortholog); PARTICIPATES IN base excision repair pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); allergic contact dermatitis (ortholog); FOUND IN mitochondrion (ortholog); nuclear matrix (ortholog); nuclear speck (ortholog) 6 33201251 33208677 - 22301074;30032202 116903420 MODEL JAAIVD010000024;XM_032905946;XM_032905947;XM_032905948 XP_032761837;XP_032761838;XP_032761839 N-glycosylase/DNA lyase protein-coding 626138071 Gpx7 glutathione peroxidase 7 ENCODES a protein that exhibits catalase activity (ortholog); peroxidase activity (ortholog); ASSOCIATED WITH Barrett's adenocarcinoma (ortholog); Barrett's esophagus (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 46448539 46456703 + 22301074;30032202 116899161 MODEL JAAIVD010000025;XM_032900725 XP_032756616 protein-coding 626138078 Syt16 synaptotagmin 16 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid binding (ortholog) 7 88487767 88518570 + 116906135 MODEL JAAIVD010000026;XM_032909127 XP_032765018 synaptotagmin-16 protein-coding 626138086 LOC116900038 olfactory receptor 50-like 5 14272602 14273543 + 22301074;30032202 116900038 MODEL JAAIVD010000023;XM_032901833 XP_032757724 protein-coding 626138089 LOC116914400 uncharacterized LOC116914400 13 32793386 32836147 - 116914400 MODEL JAAIVD010000008;XR_004389746 ncrna 626138094 Mkks MKKS centrosomal shuttling protein ENCODES a protein that exhibits RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN artery smooth muscle contraction (ortholog); brain morphogenesis (ortholog); cartilage development (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl Syndrome 2/6, Digenic (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytoplasm (ortholog) 5 116463027 116481296 - 22301074;30032202 116902020 MODEL JAAIVD010000023;XM_032904293 XP_032760184 McKusick-Kaufman syndrome;McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin protein-coding 626138104 LOC116895603 tyrosine-protein phosphatase non-receptor type substrate 1-like 3 156762029 156803472 - 30032202 116895603 MODEL JAAIVD010000012;XM_032896821 XP_032752712 protein-coding 626138112 LOC116887417 RT1 class I histocompatibility antigen, AA alpha chain-like 18 7890068 8321935 + 30032202 116887417 MODEL JAAIVD010000013;XM_032889030 XP_032744921 protein-coding 626138119 LOC116899217 heat shock cognate 71 kDa protein-like 1 102994946 102996885 + 116899217 MODEL JAAIVD010000025 pseudo 626138120 Dnaaf8 dynein axonemal assembly factor 8 FOUND IN cytoplasm (ortholog); dynein axonemal particle (ortholog) 9 16930155 16943291 - 22301074;30032202 116910153 MODEL JAAIVD010000002;XM_032914008 XP_032769899 C9H16orf71 chromosome 9 C16orf71 homolog;uncharacterized protein C16orf71 homolog protein-coding 626138133 LOC116887916 deoxycytidylate deaminase-like X 56495018 56502613 - 116887916 MODEL JAAIVD010000014 pseudo 626138134 LOC116888923 uncharacterized protein CXorf49 homolog X 60134813 60137694 + 116888923 MODEL JAAIVD010000014;XM_032890168 XP_032746059 protein-coding 626138140 LOC116893986 60S ribosomal protein L36-like 2 101466896 101467214 - 116893986 MODEL JAAIVD010000001 pseudo 626138141 Mpc1 mitochondrial pyruvate carrier 1 ENCODES a protein that exhibits pyruvate transmembrane transporter activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); pyruvate decarboxylation to acetyl-CoA (ortholog); pyruvate import into mitochondria (ortholog); PARTICIPATES IN citric acid cycle pathway; fructose-1,6-bisphosphatase deficiency pathway; fumaric aciduria pathway; ASSOCIATED WITH Fraser syndrome 3 (ortholog); mitochondrial pyruvate carrier deficiency (ortholog); substance-related disorder (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 187151291 187163032 + 22301074 116892810 MODEL JAAIVD010000001;XM_032894686 XP_032750577 protein-coding 626138150 LOC116884848 60S ribosomal protein L38-like 15 58143065 58143316 - 116884848 MODEL JAAIVD010000010 pseudo 626138151 LOC116890729 uncharacterized LOC116890729 2 2143141 2160640 - 116890729 MODEL JAAIVD010000001;XR_004386779 ncrna 626138156 Spint1 serine peptidase inhibitor, Kunitz type 1 ENCODES a protein that exhibits serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to BMP stimulus (ortholog); embryonic placenta development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); biliary atresia (ortholog); breast cancer (ortholog); FOUND IN plasma membrane (ortholog) 5 97418986 97431418 + 22301074 116901803 MODEL JAAIVD010000023;XM_032903962;XM_032903963 XP_032759853;XP_032759854 kunitz-type protease inhibitor 1 protein-coding 626138176 Epha1 EPH receptor A1 ENCODES a protein that exhibits ephrin receptor activity (ortholog); fibronectin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Colorectal Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 6 97844469 97858643 + 22301074;30032202 116903892 MODEL JAAIVD010000024;XM_032906653 XP_032762544 ephrin type-A receptor 1 protein-coding 626138197 Ndufaf7 NADH:ubiquinone oxidoreductase complex assembly factor 7 ENCODES a protein that exhibits enzyme binding (ortholog); protein-arginine omega-N symmetric methyltransferase activity (ortholog); INVOLVED IN mitochondrial respiratory chain complex I assembly (ortholog); peptidyl-arginine methylation, to symmetrical-dimethyl arginine (ortholog); FOUND IN mitochondrion (ortholog) 7 14285630 14296333 - 30032202 116905894 MODEL JAAIVD010000026;XM_032908882;XM_032908883 XP_032764773;XP_032764774 protein arginine methyltransferase NDUFAF7, mitochondrial protein-coding 626138214 LOC116910348 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like 9 68349826 68355947 + 22301074;30032202 116910348 MODEL JAAIVD010000002;XM_032914204 XP_032770095 protein-coding 626138227 Tbk1 TANK binding kinase 1 ENCODES a protein that exhibits identical protein binding (ortholog); nucleic acid binding (ortholog); phosphoprotein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); AUTOINFLAMMATION WITH ARTHRITIS AND VASCULITIS (ortholog); ENCEPHALOPATHY, ACUTE, INFECTION-INDUCED (HERPES-SPECIFIC), 8 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 199987890 200023311 - 22301074;30032202 116909528 MODEL JAAIVD010000025;XM_032913138 XP_032769029 serine/threonine-protein kinase TBK1 protein-coding 626138252 Zc4h2 zinc finger C4H2-type containing INVOLVED IN nervous system development (ortholog); noradrenergic neuron development (ortholog); positive regulation of DNA-binding transcription factor activity (ortholog); ASSOCIATED WITH female-restricted Wieacker-Wolff syndrome (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN cytoplasm (ortholog); neuronal cell body (ortholog); nucleus (ortholog) 3 169344196 169445806 + 30032202 116897122 MODEL JAAIVD010000012;XM_032898775;XM_032898776;XM_032898777;XM_032898778 XP_032754666;XP_032754667;XP_032754668;XP_032754669 zinc finger C4H2 domain-containing protein protein-coding 626138275 Lin7a lin-7 cell polarity scaffold A ENCODES a protein that exhibits L27 domain binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN inner ear development (ortholog); neurotransmitter secretion (ortholog); synaptic vesicle transport (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); membrane (ortholog); synapse (ortholog) 1 185523099 185680405 + 30032202 116908767 MODEL JAAIVD010000025;XM_032912126;XM_032912135 XP_032768017;XP_032768026 lin-7 homolog A, crumbs cell polarity complex component;protein lin-7 homolog A protein-coding 626138289 Tgfbr1 transforming growth factor beta receptor 1 ENCODES a protein that exhibits ATP binding (ortholog); growth factor binding (ortholog); I-SMAD binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered transforming growth factor-beta Smad dependent signaling pathway; colorectal cancer pathway; glypican signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Disease Models (ortholog); aortic aneurysm (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 1 100447275 100501783 + 22301074;30032202 116901977 MODEL JAAIVD010000025;XM_032904226;XM_032904234 XP_032760117;XP_032760125 TGF-beta receptor type-1 protein-coding 626138304 LOC116914347 40S ribosomal protein S7-like 13 58478005 58493797 + 116914347 MODEL JAAIVD010000008 pseudo 626138305 LOC116913765 40S ribosomal protein S17-like 12 55083673 55084131 - 22301074;30032202 116913765 MODEL JAAIVD010000007;XM_032918072 XP_032773963 protein-coding 626138309 Calm3 calmodulin 3 ENCODES a protein that exhibits adenylate cyclase activator activity (ortholog); adenylate cyclase binding (ortholog); calcium channel inhibitor activity (ortholog); INVOLVED IN autophagosome membrane docking (ortholog); calcineurin-mediated signaling (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; calcium/calcium-mediated signaling pathway; calcium/calmodulin dependent kinase 2 signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol withdrawal syndrome (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN calcium channel complex (ortholog); calyx of Held (ortholog); catalytic complex (ortholog) 2 172166833 172173867 + 22301074;30032202 116892587 MODEL JAAIVD010000001;XM_032894367 XP_032750258 calmodulin-3 protein-coding 626138319 LOC116902605 small nucleolar RNA SNORA17 5 90313632 90313762 + 116902605 MODEL JAAIVD010000023;XR_004388192 snorna 626138322 LOC116900654 ADP/ATP translocase 2-like 5 118773919 118775156 - 116900654 MODEL JAAIVD010000023 pseudo 626138323 Vgll3 vestigial like family member 3 4 77084693 77128902 + 22301074;30032202 116898020 MODEL JAAIVD010000003;XM_032899409;XM_032899410;XM_032899411 XP_032755300;XP_032755301;XP_032755302 transcription cofactor vestigial-like protein 3 protein-coding 626138335 LOC116915235 zinc finger protein 120-like 14 76673994 76705288 + 22301074 116915235 MODEL JAAIVD010000009;XM_032919625;XM_032919626;XM_032919627;XM_032919628 XP_032775516;XP_032775517;XP_032775518;XP_032775519 protein-coding 626138353 LOC116907918 uncharacterized LOC116907918 1 168755834 168762896 + 116907918 MODEL JAAIVD010000025;XR_004388854 ncrna 626138357 LOC116894495 60S ribosomal protein L36a-like 2 171289057 171289363 - 116894495 MODEL JAAIVD010000001 pseudo 626138358 LOC116883939 uncharacterized LOC116883939 14 3857098 4188136 - 116883939 MODEL JAAIVD010000009;XR_004385803 ncrna 626138364 LOC116909362 olfactory receptor 1361-like 9 38446365 38447298 + 22301074;30032202 116909362 MODEL JAAIVD010000002;XM_032912910 XP_032768801 protein-coding 626138367 Tafa1 TAFA chemokine like family member 1 ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN neuroblast differentiation (ortholog); regulation of neuroblast proliferation (ortholog); regulation of signaling receptor activity (ortholog); FOUND IN endoplasmic reticulum (ortholog); extracellular space (ortholog) 6 50367869 50855630 - 30032202 116903478 MODEL JAAIVD010000024;XM_032906045 XP_032761936 chemokine-like protein TAFA-1 protein-coding 626138376 LOC116887790 small nucleolar RNA SNORA38 18 7760358 7760491 - 116887790 MODEL JAAIVD010000013;XR_004386285 snorna 626138379 LOC116904091 uncharacterized LOC116904091 6 132082912 132102886 + 116904091 MODEL JAAIVD010000024;XR_004388328 ncrna 626138384 Txnl4a thioredoxin like 4A INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Burn-McKeown syndrome (ortholog); genetic disease (ortholog); Oculootofacial Dysplasia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 15 52003860 52018833 - 22301074;30032202 116884467 MODEL JAAIVD010000010;XM_032885575;XM_032885576;XM_032885577 XP_032741466;XP_032741467;XP_032741468 thioredoxin-like protein 4A protein-coding 626138398 Iqch IQ motif containing H INVOLVED IN gene expression (ortholog); lncRNA transcription (ortholog); single fertilization (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN nuclear speck (ortholog) 8 57714641 57896784 - 22301074 116906622 MODEL JAAIVD010000027;XM_032909380;XM_032909381 XP_032765271;XP_032765272 IQ domain-containing protein H protein-coding 626138429 LOC116900237 putative olfactory receptor 5AK3 5 62740813 62741760 - 22301074;30032202 116900237 MODEL JAAIVD010000023;XM_032901987 XP_032757878 protein-coding 626138432 LOC116909937 uncharacterized LOC116909937 9 66279283 66285720 + 116909937 MODEL JAAIVD010000002;XR_004389113 ncrna 626138438 LOC116884720 protocadherin beta-8 15 980273 983222 + 22301074 116884720 MODEL JAAIVD010000010;XM_032885906 XP_032741797 protein-coding 626138443 Esyt1 extended synaptotagmin 1 ENCODES a protein that exhibits identical protein binding (ortholog); phospholipid transfer activity (ortholog); INVOLVED IN intermembrane lipid transfer (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 155972977 155990210 - 22301074 116906187 MODEL JAAIVD010000025;XM_032909151;XM_032909152 XP_032765042;XP_032765043 extended synaptotagmin-1 protein-coding 626138482 Ccdc9 coiled-coil domain containing 9 ENCODES a protein that exhibits RNA binding (ortholog); FOUND IN exon-exon junction complex (ortholog) 2 172774053 172786512 + 116892601 MODEL JAAIVD010000001;XM_032894383;XM_032894385;XM_032894386;XM_032894387;XM_032894388;XM_032894389;XM_032894390;XM_032894391;XM_032894392;XM_032894393;XM_032894394;XM_032894395;XM_032894396 XP_032750274;XP_032750276;XP_032750277;XP_032750278;XP_032750279;XP_032750280;XP_032750281;XP_032750282;XP_032750283;XP_032750284;XP_032750285;XP_032750286;XP_032750287 coiled-coil domain-containing protein 9 protein-coding 626138533 Sec61a1 SEC61 translocon subunit alpha 1 ENCODES a protein that exhibits calcium channel activity (ortholog); ribosome binding (ortholog); transmembrane transporter activity (ortholog); INVOLVED IN cotranslational protein targeting to membrane (ortholog); endoplasmic reticulum organization (ortholog); post-translational protein targeting to endoplasmic reticulum membrane (ortholog); ASSOCIATED WITH autosomal dominant tubulointerstitial kidney disease 5 (ortholog); autosomal recessive Alport syndrome (ortholog); Common Variable Immunodeficiency 15 (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); membrane (ortholog); Sec61 translocon complex (ortholog) 6 57802034 57816577 + 22301074;30032202 116903522 MODEL JAAIVD010000024;XM_032906133 XP_032762024 protein transport protein Sec61 subunit alpha protein-coding 626138549 Rwdd2a RWD domain containing 2A 8 80618065 80620608 + 22301074 116907948 MODEL JAAIVD010000027;XM_032911169 XP_032767060 RWD domain-containing protein 2A protein-coding 626138555 LOC116907942 uncharacterized LOC116907942 8 69179875 69194408 - 116907942 MODEL JAAIVD010000027;XR_004388856 ncrna 626138559 LOC116898952 60S ribosomal protein L17-like 4 48506851 48507345 + 116898952 MODEL JAAIVD010000003 pseudo 626138560 LOC116910874 uncharacterized LOC116910874 10 23912065 23917481 - 116910874 MODEL JAAIVD010000005;XR_004389288 ncrna 626138566 LOC116895069 U2 spliceosomal RNA 2 92504676 92504821 - 116895069 MODEL JAAIVD010000001 pseudo 626138567 LOC116906456 U1 spliceosomal RNA 7 68084671 68084827 + 116906456 MODEL JAAIVD010000026;XR_004388712 snrna 626138570 LOC116894845 U6 spliceosomal RNA 2 89640955 89641061 - 116894845 MODEL JAAIVD010000001;XR_004387060 snrna 626138573 LOC116903530 histone H1x ASSOCIATED WITH Animal Disease Models (ortholog); COVID-19 (ortholog); lung adenocarcinoma (ortholog); FOUND IN chromosome (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 6 58341112 58342171 + 22301074 116903530 MODEL JAAIVD010000024;XM_032906140 XP_032762031 protein-coding 626138578 Mphosph10 M-phase phosphoprotein 10 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN chromosome (ortholog); Mpp10 complex (ortholog); nucleolus (ortholog) 2 136015878 136032001 + 22301074;30032202 116892009 MODEL JAAIVD010000001;XM_032893470 XP_032749361 U3 small nucleolar ribonucleoprotein protein MPP10 protein-coding 626138593 LOC116887624 olfactory receptor 12D2-like 18 10314683 10317070 + 22301074 116887624 MODEL JAAIVD010000013;XM_032889226 XP_032745117 protein-coding 626138598 Znf189 zinc finger protein 189 7 57357899 57369152 - 30032202 116905001 MODEL JAAIVD010000026;XM_032907684;XM_032907686 XP_032763575;XP_032763577 protein-coding 626138609 Aak1 AP2 associated kinase 1 ENCODES a protein that exhibits AP-2 adaptor complex binding (ortholog); Notch binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of Notch signaling pathway (ortholog); presynaptic endocytosis (ortholog); protein phosphorylation (ortholog); ASSOCIATED WITH tooth agenesis (ortholog); FOUND IN calyx of Held (ortholog); cell leading edge (ortholog); clathrin complex (ortholog) 6 59322128 59400703 - 22301074 116904313 MODEL JAAIVD010000024;XM_032907228 XP_032763119 AP2-associated protein kinase 1 protein-coding 626138634 Nr4a1 nuclear receptor subfamily 4 group A member 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN apoptotic process (ortholog); cell migration involved in sprouting angiogenesis (ortholog); cellular response to corticotropin-releasing hormone stimulus (ortholog); ASSOCIATED WITH Albuminuria (ortholog); blood pressure trait (ortholog); blood urea nitrogen amount (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); fibrillar center (ortholog) 1 261816890 261837125 - 22301074;30032202 116883781 MODEL JAAIVD010000025;XM_032885027;XM_032885036 XP_032740918;XP_032740927 protein-coding 626138649 LOC116905194 adenylate kinase 2, mitochondrial-like 7 91790120 91791388 - 22301074;30032202 116905194 MODEL JAAIVD010000026;XM_032907988 XP_032763879 protein-coding 626138654 LOC116894694 glyceraldehyde-3-phosphate dehydrogenase-like 2 215317454 215318459 - 116894694 MODEL JAAIVD010000001 pseudo 626138655 Abhd13 abhydrolase domain containing 13 ENCODES a protein that exhibits palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN protein depalmitoylation (ortholog); FOUND IN cytoplasm (ortholog); dendrite cytoplasm (ortholog) 13 73841504 73854939 - 30032202 116914558 MODEL JAAIVD010000008;XM_032918907;XM_032918908;XM_032918910;XM_032918911 XP_032774798;XP_032774799;XP_032774801;XP_032774802 protein ABHD13 protein-coding 626138669 Artn artemin ENCODES a protein that exhibits growth factor activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); glial cell-derived neurotrophic factor receptor signaling pathway (ortholog); induction of positive chemotaxis (ortholog); ASSOCIATED WITH acoustic neuroma (ortholog); Animal Disease Models (ortholog); atopic dermatitis (ortholog); FOUND IN extracellular space (ortholog) 1 39093333 39096972 + 22301074;30032202 116897985 MODEL JAAIVD010000025;XM_032899390;XM_032899395;XM_032899396 XP_032755281;XP_032755286;XP_032755287 protein-coding 626138683 LOC116908479 olfactory receptor 1361-like 9 38356824 38357339 - 22301074;30032202 116908479 MODEL JAAIVD010000002;XM_032911632 XP_032767523 protein-coding 626138686 LOC116890403 U6 spliceosomal RNA 1 117800345 117800450 + 116890403 MODEL JAAIVD010000025;XR_004386605 snrna 626138689 Htatip2 HIV-1 Tat interactive protein 2 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN positive regulation of programmed cell death (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); protein autophosphorylation (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 2 150067336 150082514 - 30032202 116892072 MODEL JAAIVD010000001;XM_032893542 XP_032749433 oxidoreductase HTATIP2 protein-coding 626138699 LOC116897598 small nucleolar RNA SNORA17 3 141745552 141745671 - 116897598 MODEL JAAIVD010000012 pseudo 626138700 LOC116910963 pyruvate kinase PKM-like 10 84841294 84850965 + 116910963 MODEL JAAIVD010000005 pseudo 626138701 LOC116913573 elongation factor 1-alpha 1-like 1 178480054 178493563 + 116913573 MODEL JAAIVD010000025 pseudo 626138702 LOC116887985 rRNA 2'-O-methyltransferase fibrillarin-like X 71188995 71194400 - 116887985 MODEL JAAIVD010000014 pseudo 626138703 Xdh xanthine dehydrogenase ENCODES a protein that exhibits 2 iron, 2 sulfur cluster binding (ortholog); flavin adenine dinucleotide binding (ortholog); hypoxanthine dehydrogenase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); allantoin metabolic process (ortholog); amide catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH acute kidney failure (ortholog); Acute Lung Injury (ortholog); Animal Mammary Neoplasms (ortholog); FOUND IN cytosol (ortholog); extracellular space (ortholog); peroxisome (ortholog) 7 19300306 19363529 + 22301074;30032202 116905625 MODEL JAAIVD010000026;XM_032908607 XP_032764498 xanthine dehydrogenase/oxidase protein-coding 626138740 Tomm7 translocase of outer mitochondrial membrane 7 INVOLVED IN positive regulation of protein targeting to mitochondrion (ortholog); positive regulation of type 2 mitophagy (ortholog); regulation of protein stability (ortholog); PARTICIPATES IN beta-barrel pathway of mitochondrial protein import; carrier pathway of mitochondrial protein import; mitochondrial autophagy pathway; ASSOCIATED WITH GARG-MISHRA PROGEROID SYNDROME (ortholog); FOUND IN mitochondrial outer membrane translocase complex (ortholog); mitochondrion (ortholog) 6 153060026 153066199 - 22301074 116904194 MODEL JAAIVD010000024;XM_032907107 XP_032762998 mitochondrial import receptor subunit TOM7 homolog protein-coding 626138747 B3gnt4 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 4 ENCODES a protein that exhibits N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN poly-N-acetyllactosamine biosynthetic process (ortholog) 16 30335456 30339005 - 22301074;30032202 116885460 MODEL JAAIVD010000004;XM_032886742 XP_032742633 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4 protein-coding 626138753 LOC116899823 small nucleolar RNA SNORA19 4 83088659 83088789 + 116899823 MODEL JAAIVD010000003;XR_004387823 snorna 626138756 Myo7b myosin VIIB INVOLVED IN brush border assembly (ortholog); ASSOCIATED WITH neuromuscular disease (ortholog); FOUND IN apical cytoplasm (ortholog); brush border (ortholog); microvillus (ortholog) 15 12212587 12276809 + 22301074 116884273 MODEL JAAIVD010000010;XM_032885357 XP_032741248 unconventional myosin-VIIb protein-coding 626138806 Thbs2 thrombospondin 2 INVOLVED IN negative regulation of angiogenesis (ortholog); positive regulation of synapse assembly (ortholog); ASSOCIATED WITH Cerebral Hemorrhage (ortholog); diabetes mellitus (ortholog); diabetic angiopathy (ortholog); FOUND IN basement membrane (ortholog); extracellular matrix (ortholog); platelet alpha granule (ortholog) 14 1222301 1246617 + 22301074;30032202 116883911 MODEL JAAIVD010000009;XM_032885170 XP_032741061 thrombospondin-2 protein-coding 626138830 LOC116911807 small nucleolar RNA SNORD74 10 40324712 40324791 + 116911807 MODEL JAAIVD010000005;XR_004389347 snorna 626138833 LOC116895192 chromobox protein homolog 3-like 3 222868852 222870447 - 116895192 MODEL JAAIVD010000012 pseudo 626138834 LOC116896318 uncharacterized LOC116896318 3 41330262 41334411 - 116896318 MODEL JAAIVD010000012;XR_004387332 ncrna 626138839 Laptm5 lysosomal protein transmembrane 5 ENCODES a protein that exhibits enzyme binding (ortholog); protein sequestering activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); defense response to tumor cell (ortholog); Golgi to lysosome transport (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasmic vesicle (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 1 27387558 27409795 - 30032202 116895789 MODEL JAAIVD010000025;XM_032896935;XM_032896940 XP_032752826;XP_032752831 lysosomal-associated transmembrane protein 5 protein-coding 626138856 Ccdc7 coiled-coil domain containing 7 17 48377464 48430593 + 116886474 MODEL JAAIVD010000011;XM_032887978 XP_032743869 coiled-coil domain-containing protein 7 protein-coding 626138871 Stum stum, mechanosensory transduction mediator homolog 10 58771647 58822365 - 116911262 MODEL JAAIVD010000005;XM_032915166 XP_032771057 protein stum homolog protein-coding 626138879 LOC116884002 thymosin beta-10-like 14 69475097 69475231 - 22301074;30032202 116884002 MODEL JAAIVD010000009;XM_032885238 XP_032741129 protein-coding 626138882 LOC116890127 maestro heat-like repeat family member 5 1 247348639 247374484 - 30032202 116890127 MODEL JAAIVD010000025;XM_032890865 XP_032746756 protein-coding 626138909 Crkl CRK like proto-oncogene, adaptor protein ENCODES a protein that exhibits identical protein binding (ortholog); phosphotyrosine residue binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; erythropoietin signaling pathway; insulin-like growth factor signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); chronic myeloid leukemia (ortholog); colon carcinoma (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic membrane (ortholog); neuromuscular junction (ortholog) 4 2701785 2738464 + 22301074;30032202 116898638 MODEL JAAIVD010000003;XM_032899858;XM_032899859 XP_032755749;XP_032755750 crk-like protein protein-coding 626138920 Cstpp1 centriolar satellite-associated tubulin polyglutamylase complex regulator 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN cilium disassembly (ortholog); microtubule cytoskeleton organization (ortholog); microtubule polymerization (ortholog); FOUND IN centriolar satellite (ortholog) 5 65440217 65598780 - 116901619 MODEL JAAIVD010000023;XM_032903670 XP_032759561 C5H11orf49 UPF0705 protein C11orf49 homolog;chromosome 5 C11orf49 homolog protein-coding 626138933 Angel1 angel homolog 1 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); protein domain specific binding (ortholog); FOUND IN cis-Golgi network (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 7 100787974 100813367 - 30032202 116905309 MODEL JAAIVD010000026;XM_032908192;XM_032908193 XP_032764083;XP_032764084 protein angel homolog 1 protein-coding 626138950 Slc5a7 solute carrier family 5 member 7 ENCODES a protein that exhibits choline binding (ortholog); choline transmembrane transporter activity (ortholog); choline:sodium symporter activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); choline transport (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH asthma (ortholog); autosomal dominant distal hereditary motor neuronopathy 7 (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN apical plasma membrane (ortholog); axon (ortholog); clathrin-coated endocytic vesicle (ortholog) 4 91367428 91391451 - 22301074;30032202 116899232 MODEL JAAIVD010000003;XM_032900830 XP_032756721 high affinity choline transporter 1 protein-coding 626138961 LOC116914255 beta-defensin 14 13 64953665 64954526 - 22301074;30032202 116914255 MODEL JAAIVD010000008;XM_032918466 XP_032774357 protein-coding 626138966 LOC116913421 60S ribosomal protein L35-like 12 9575151 9582281 - 116913421 MODEL JAAIVD010000007 pseudo 626138967 Pdc phosducin FOUND IN photoreceptor outer segment (ortholog) 10 29786066 29792566 + 22301074 116911234 MODEL JAAIVD010000005;XM_032915134 XP_032771025 protein-coding 626138974 LOC116896717 cytochrome c1, heme protein, mitochondrial-like 1 85603164 85604779 - 116896717 MODEL JAAIVD010000025 pseudo 626138975 LOC116900507 uncharacterized protein C9orf85 homolog 5 75711251 75711716 - 116900507 MODEL JAAIVD010000023 pseudo 626138976 Plrg1 pleiotropic regulator 1 INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of G1/S transition of mitotic cell cycle (ortholog); protein localization to nucleus (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN catalytic step 2 spliceosome (ortholog); DNA replication factor A complex (ortholog); fibrillar center (ortholog) 3 70448676 70464650 - 22301074;30032202 116896744 MODEL JAAIVD010000012;XM_032898183 XP_032754074 protein-coding 626138995 LOC116911812 small nucleolar RNA SNORA36 family 10 7835137 7835267 - 116911812 MODEL JAAIVD010000005;XR_004389351 snorna 626138998 Spcs3 signal peptidase complex subunit 3 INVOLVED IN proteolysis (ortholog); signal peptide processing (ortholog); viral protein processing (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); signal peptidase complex (ortholog) 5 122639927 122648080 + 22301074;30032202 116902034 MODEL JAAIVD010000023;XM_032904318 XP_032760209 protein-coding 626139007 Dock5 dedicator of cytokinesis 5 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN bone remodeling (ortholog); negative regulation of vascular associated smooth muscle contraction (ortholog); podosome assembly (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 12 56545538 56725147 + 22301074;30032202 116913960 MODEL JAAIVD010000007;XM_032918230 XP_032774121 dedicator of cytokinesis protein 5 protein-coding 626139063 LOC116911802 small nucleolar RNA SNORA70 10 64817721 64817843 + 116911802 MODEL JAAIVD010000005 pseudo 626139064 Adamts6 ADAM metallopeptidase with thrombospondin type 1 motif 6 INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH primary ovarian insufficiency (ortholog) 3 192863348 193081168 - 22301074;30032202 116897226 MODEL JAAIVD010000012;XM_032898945 XP_032754836 A disintegrin and metalloproteinase with thrombospondin motifs 6 protein-coding 626139093 LOC116914984 tripartite motif-containing protein 60-like 13 24136359 24137431 + 116914984 MODEL JAAIVD010000008 pseudo 626139094 LOC116913417 mast cell protease 2 12 68962131 68964757 - 22301074;30032202 116913417 MODEL JAAIVD010000007;XM_032917602 XP_032773493 protein-coding 626139103 LOC116900306 olfactory receptor 8H1-like 5 63983514 63984461 - 22301074;30032202 116900306 MODEL JAAIVD010000023;XM_032902062 XP_032757953 protein-coding 626139106 LOC116907329 olfactory receptor 1537-like 8 82346879 82347823 + 22301074;30032202 116907329 MODEL JAAIVD010000027;XM_032910275 XP_032766166 protein-coding 626139109 Tspoap1 TSPO associated protein 1 ENCODES a protein that exhibits benzodiazepine receptor binding (ortholog); voltage-gated calcium channel activity involved in regulation of presynaptic cytosolic calcium levels (ortholog); INVOLVED IN regulation of neurotransmitter secretion (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); COVID-19 (ortholog); dystonia (ortholog); FOUND IN calyx of Held (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 9 83013752 83038138 - 22301074;30032202 116908733 MODEL JAAIVD010000002;XM_032912077;XM_032912078;XM_032912079 XP_032767968;XP_032767969;XP_032767970 peripheral-type benzodiazepine receptor-associated protein 1 protein-coding 626139149 LOC116888778 60S ribosomal protein L29-like 1 102251585 102252091 + 116888778 MODEL JAAIVD010000025 pseudo 626139150 LOC116895558 prohibitin-like 3 126746490 126747339 - 116895558 MODEL JAAIVD010000012;XR_004387288 pseudo 626139153 Sla2 Src like adaptor 2 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN negative regulation of calcium-mediated signaling (ortholog); negative regulation of T cell receptor signaling pathway (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasmic vesicle (ortholog); Golgi apparatus (ortholog); late endosome (ortholog) 5 136202675 136222633 - 22301074 116902211 MODEL JAAIVD010000023;XM_032904610;XM_032904611;XM_032904612 XP_032760501;XP_032760502;XP_032760503 src-like-adapter 2 protein-coding 626139172 Ndrg2 NDRG family member 2 INVOLVED IN negative regulation of cytokine production (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of vascular associated smooth muscle cell proliferation (ortholog); ASSOCIATED WITH cataract (ortholog); Colonic Neoplasms (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); Golgi apparatus (ortholog); nucleus (ortholog) 12 71984151 71992998 + 30032202 116913458 MODEL JAAIVD010000007;XM_032917660 XP_032773551 protein NDRG2 protein-coding 626139192 LOC116887060 40S ribosomal protein S20-like 18 4929183 4929673 + 116887060 MODEL JAAIVD010000013 pseudo 626139193 Hoga1 4-hydroxy-2-oxoglutarate aldolase 1 ENCODES a protein that exhibits (R,S)-4-hydroxy-2-oxoglutarate aldolase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN glyoxylate catabolic process (ortholog); glyoxylate metabolic process (ortholog); oxalate metabolic process (ortholog); ASSOCIATED WITH cholestasis (ortholog); genetic disease (ortholog); primary hyperoxaluria (ortholog); FOUND IN mitochondrion (ortholog) 2 41160029 41187819 + 30032202 116891171 MODEL JAAIVD010000001;XM_032891983 XP_032747874 4-hydroxy-2-oxoglutarate aldolase, mitochondrial protein-coding 626139204 LOC116908340 U7 small nuclear RNA 8 12814523 12814585 + 116908340 MODEL JAAIVD010000027;XR_004388892 snrna 626139207 LOC116886727 small nucleolar RNA SNORA19 17 30542929 30543060 - 116886727 MODEL JAAIVD010000011;XR_004386138 snorna 626139210 LOC116914351 beta-defensin 12-like 13 64472560 64478549 - 116914351 MODEL JAAIVD010000008 pseudo 626139211 Cutc cutC copper transporter ENCODES a protein that exhibits copper ion binding (ortholog); INVOLVED IN protein tetramerization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleolus (ortholog) 2 43272442 43286699 + 30032202 116891198 MODEL JAAIVD010000001;XM_032892022;XM_032892023 XP_032747913;XP_032747914 copper homeostasis protein cutC homolog protein-coding 626139228 Akirin2 akirin 2 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cerebral cortex development (ortholog); defense response to bacterium (ortholog); embryo development ending in birth or egg hatching (ortholog); ASSOCIATED WITH Neoplasm Metastasis (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); nucleoplasm (ortholog) 1 108192007 108206532 - 30032202 116902220 MODEL JAAIVD010000025;XM_032904627 XP_032760518 akirin-2 protein-coding 626139237 LOC116887967 glyceraldehyde-3-phosphate dehydrogenase-like 1 227935157 227937808 - 116887967 MODEL JAAIVD010000025 pseudo 626139238 Erp29 endoplasmic reticulum protein 29 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN negative regulation of gene expression (ortholog); negative regulation of protein secretion (ortholog); positive regulation of gene expression (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); lung adenocarcinoma (ortholog); Neoplasm Metastasis (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); smooth endoplasmic reticulum (ortholog) 16 32357484 32363804 + 22301074;30032202 116885498 MODEL JAAIVD010000004;XM_032886790 XP_032742681 endoplasmic reticulum resident protein 29 protein-coding 626139245 LOC116900431 olfactory receptor 4C15-like 5 70657312 70658247 - 22301074 116900431 MODEL JAAIVD010000023;XM_032902172 XP_032758063 protein-coding 626139248 Slc20a1 solute carrier family 20 member 1 ENCODES a protein that exhibits high-affinity phosphate:sodium symporter activity (ortholog); sodium:phosphate symporter activity (ortholog); INVOLVED IN biomineral tissue development (ortholog); cell population proliferation (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Calcification of Aortic Valve (ortholog); endometriosis (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN plasma membrane (ortholog) 5 107962087 107975399 + 22301074;30032202 116901957 MODEL JAAIVD010000023;XM_032904194;XM_032904195;XM_032904196 XP_032760085;XP_032760086;XP_032760087 sodium-dependent phosphate transporter 1 protein-coding 626139270 Mylk3 myosin light chain kinase 3 ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); myosin light chain kinase activity (ortholog); INVOLVED IN cardiac myofibril assembly (ortholog); cellular response to interleukin-1 (ortholog); positive regulation of membrane permeability (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 14387047 14438025 + 22301074;30032202 116886288 MODEL JAAIVD010000011;XM_032887718;XM_032887719 XP_032743609;XP_032743610 protein-coding 626139290 Wdr31 WD repeat domain 31 1 91070118 91088221 + 22301074 116901393 MODEL JAAIVD010000025;XM_032903266;XM_032903274;XM_032903282 XP_032759157;XP_032759165;XP_032759173 WD repeat-containing protein 31 protein-coding 626139310 LOC116898403 G1/S-specific cyclin-D3-like 4 82278650 82280087 - 116898403 MODEL JAAIVD010000003;XM_032899690 XP_032755581 protein-coding 626139315 Olig2 oligodendrocyte transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); HMG box domain binding (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); myelination (ortholog); negative regulation of neuron differentiation (ortholog); ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); genetic disease (ortholog); HIV Encephalitis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 53369969 53373324 - 22301074 116898997 MODEL JAAIVD010000003;XM_032900443 XP_032756334 protein-coding 626139321 LOC116892022 uncharacterized LOC116892022 2 137866000 137946744 + 116892022 MODEL JAAIVD010000001;XR_004386893;XR_004386894;XR_004386895;XR_004386896;XR_004386897;XR_004386898;XR_004386899 ncrna 626139346 Lrfn3 leucine rich repeat and fibronectin type III domain containing 3 INVOLVED IN regulation of presynapse assembly (ortholog); regulation of synaptic membrane adhesion (ortholog); synaptic membrane adhesion (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cell surface (ortholog); glutamatergic synapse (ortholog); postsynaptic density membrane (ortholog) 2 165638572 165645837 + 22301074 116892321 MODEL JAAIVD010000001;XM_032893945 XP_032749836 leucine-rich repeat and fibronectin type-III domain-containing protein 3 protein-coding 626139353 LOC116898271 olfactory receptor 6B2 4 164469346 164470284 - 22301074 116898271 MODEL JAAIVD010000003;XM_032899623 XP_032755514 protein-coding 626139356 LOC116891699 protein CEBPZOS-like 2 95823480 95823743 + 116891699 MODEL JAAIVD010000001 pseudo 626139357 LOC116899015 keratin-associated protein 26-1 4 55193879 55194520 + 30032202 116899015 MODEL JAAIVD010000003;XM_032900463 XP_032756354 protein-coding 626139360 LOC116893468 sepiapterin reductase-like 2 180197971 180209823 - 116893468 MODEL JAAIVD010000001 pseudo 626139361 Ttc38 tetratricopeptide repeat domain 38 1 255180966 255203117 + 22301074 116914707 MODEL JAAIVD010000025;XM_032919140 XP_032775031 tetratricopeptide repeat protein 38 protein-coding 626139378 Rabgap1l RAB GTPase activating protein 1 like ENCODES a protein that exhibits GTPase activator activity (ortholog); small GTPase binding (ortholog); INVOLVED IN regulation of cilium assembly (ortholog); regulation of protein localization (ortholog); ASSOCIATED WITH cholesteatoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cilium (ortholog); early endosome (ortholog); Golgi apparatus (ortholog) 10 39513251 40071502 - 116911725 MODEL JAAIVD010000005;XM_032915698;XM_032915699;XM_032915700;XM_032915701;XM_032915702;XM_032915703;XM_032915704 XP_032771589;XP_032771590;XP_032771591;XP_032771592;XP_032771593;XP_032771594;XP_032771595 rab GTPase-activating protein 1-like protein-coding 626139430 LOC116898464 paraspeckle component 1-like 4 106462411 106474128 - 116898464 MODEL JAAIVD010000003 pseudo 626139431 Lfng LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase ENCODES a protein that exhibits O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity (ortholog); INVOLVED IN compartment pattern specification (ortholog); marginal zone B cell differentiation (ortholog); negative regulation of Notch signaling pathway involved in somitogenesis (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH genetic disease (ortholog); spondylocostal dysostosis 2 (ortholog); spondylocostal dysostosis 3 (ortholog) 16 12589628 12598066 - 22301074;30032202 116885172 MODEL JAAIVD010000004;XM_032886388 XP_032742279 beta-1,3-N-acetylglucosaminyltransferase lunatic fringe protein-coding 626139443 Plekha3 pleckstrin homology domain containing A3 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol-4-phosphate binding (ortholog); FOUND IN Golgi apparatus (ortholog) 5 54026412 54048380 + 30032202 116901549 MODEL JAAIVD010000023;XM_032903536 XP_032759427 pleckstrin homology domain-containing family A member 3 protein-coding 626139455 Fam241b family with sequence similarity 241 member B 18 27930148 27933600 - 30032202 116887295 MODEL JAAIVD010000013;XM_032888876;XM_032888877;XM_032888878 XP_032744767;XP_032744768;XP_032744769 protein FAM241B protein-coding 626139467 LOC116894952 small nucleolar RNA SNORD113/SNORD114 family 2 131401959 131402026 - 116894952 MODEL JAAIVD010000001 pseudo 626139468 Tma7 translation machinery associated 7 homolog X 8472827 8473286 + 116888740 MODEL JAAIVD010000014;XM_032890033 XP_032745924 translation machinery-associated protein 7 protein-coding 626139473 Zdhhc4 zDHHC palmitoyltransferase 4 ENCODES a protein that exhibits palmitoyltransferase activity (ortholog); INVOLVED IN cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of cell migration (ortholog); positive regulation of cell migration (ortholog); FOUND IN endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 16 9814620 9827675 + 30032202 116885352 MODEL JAAIVD010000004;XM_032886627 XP_032742518 probable palmitoyltransferase ZDHHC4;zinc finger DHHC-type palmitoyltransferase 4 protein-coding 626139485 Znrd2 zinc ribbon domain containing 2 ENCODES a protein that exhibits identical protein binding (ortholog) 2 1962824 1964306 + 116890696 MODEL JAAIVD010000001;XM_032891116 XP_032747007 protein ZNRD2 protein-coding 626139493 LOC116894967 small nucleolar RNA SNORA36 family 2 227227232 227227362 + 116894967 MODEL JAAIVD010000001;XR_004387159 snorna 626139496 Pcmtd2 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 1 81983 101557 + 30032202 116890648 MODEL JAAIVD010000025;XM_032891019;XM_032891029;XR_004386775 XP_032746910;XP_032746920 protein-L-isoaspartate O-methyltransferase domain-containing protein 2 protein-coding 626139513 Brd3os BRD3 opposite strand 5 9215518 9217155 - 116901239 MODEL JAAIVD010000023;XM_032902988 XP_032758879 putative uncharacterized protein BRD3OS protein-coding 626139519 LOC116895457 heat shock cognate 71 kDa protein-like 3 80553388 80554095 - 116895457 MODEL JAAIVD010000012 pseudo 626139520 LOC116887518 olfactory receptor 12D2-like 18 10220411 10221338 - 116887518 MODEL JAAIVD010000013 pseudo 626139521 Htr5a 5-hydroxytryptamine receptor 5A ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); Gi/o-coupled serotonin receptor activity (ortholog); serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting serotonin receptor signaling pathway (ortholog); G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (ortholog); ASSOCIATED WITH autistic disorder (ortholog); intracranial hypertension (ortholog); prostate cancer (ortholog); FOUND IN dendrite (ortholog); perikaryon (ortholog); plasma membrane (ortholog) 6 156744047 156754370 + 22301074;30032202 116904232 MODEL JAAIVD010000024;XM_032907174;XM_032907175 XP_032763065;XP_032763066 protein-coding 626139531 LOC116902797 probable inactive serine protease 58 6 41751631 41758463 - 22301074 116902797 MODEL JAAIVD010000024;XM_032905133;XM_032905134 XP_032761024;XP_032761025 protein-coding 626139540 Sh2b2 SH2B adaptor protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); SH2 domain binding (ortholog); signaling adaptor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell receptor signaling pathway (ortholog); B-1 B cell homeostasis (ortholog); PARTICIPATES IN insulin signaling pathway; FOUND IN actin filament (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 17773681 17801297 + 30032202 116885696 MODEL JAAIVD010000004;XM_032887001;XM_032887002;XM_032887003 XP_032742892;XP_032742893;XP_032742894 SH2B adapter protein 2 protein-coding 626139558 Rras RAS related ENCODES a protein that exhibits GDP binding (ortholog); GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN face morphogenesis (ortholog); leukocyte differentiation (ortholog); negative regulation of Schwann cell migration (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH COVID-19 (ortholog); Hereditary Neoplastic Syndromes (ortholog); juvenile myelomonocytic leukemia (ortholog) 2 154522970 154527005 - 22301074;30032202 116892175 MODEL JAAIVD010000001;XM_032893684 XP_032749575 ras-related protein R-Ras protein-coding 626139568 LOC116888163 protein FAM122A-like X 115952796 115973559 - 30032202 116888163 MODEL JAAIVD010000014;XM_032889486 XP_032745377 protein-coding 626139577 LOC116899887 small nucleolar RNA SNORA17 4 28729027 28729138 - 116899887 MODEL JAAIVD010000003 pseudo 626139578 LOC116888242 transmembrane protein 258-like X 88079937 88080176 + 22301074;30032202 116888242 MODEL JAAIVD010000014;XM_032889529 XP_032745420 protein-coding 626139581 LOC116897575 small nucleolar RNA SNORA17 3 57526046 57526173 + 116897575 MODEL JAAIVD010000012;XR_004387584 snorna 626139584 LOC116889038 uncharacterized LOC116889038 1 116606014 116621132 - 116889038 MODEL JAAIVD010000025;XR_004386361 ncrna 626139589 Ccnb1ip1 cyclin B1 interacting protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN blastocyst formation (ortholog); chiasma assembly (ortholog); reciprocal meiotic recombination (ortholog); FOUND IN condensed nuclear chromosome (ortholog); synaptonemal complex (ortholog) 12 72507410 72520335 + 30032202 116913599 MODEL JAAIVD010000007;XM_032917850 XP_032773741 E3 ubiquitin-protein ligase CCNB1IP1 protein-coding 626139599 LOC116900479 olfactory receptor 4C45-like 5 71600258 71601177 + 22301074 116900479 MODEL JAAIVD010000023;XM_032902215 XP_032758106 protein-coding 626139602 LOC116915011 uncharacterized LOC116915011 13 34021384 34030227 - 116915011 MODEL JAAIVD010000008 pseudo 626139603 Cd300lb CD300 molecule like family member b ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); neutrophil mediated immunity (ortholog); positive regulation of mast cell activation (ortholog) 9 74387373 74391645 + 30032202 116910365 MODEL JAAIVD010000002;XM_032914217 XP_032770108 CMRF35-like molecule 7 protein-coding 626139609 Ube2m ubiquitin conjugating enzyme E2 M ENCODES a protein that exhibits NEDD8 transferase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN positive regulation of neuron apoptotic process (ortholog); protein neddylation (ortholog); regulation of postsynapse assembly (ortholog); PARTICIPATES IN neddylation pathway; proteasome degradation pathway involving cullin-dependent ubiquitin ligases; FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 2 174148433 174151504 + 116892632 MODEL JAAIVD010000001;XM_032894453 XP_032750344 NEDD8-conjugating enzyme Ubc12 protein-coding 626139619 LOC116889004 histone deacetylase 6-like X 14189766 14198637 + 30032202 116889004 MODEL JAAIVD010000014;XM_032890214 XP_032746105 protein-coding 626139633 Znf408 zinc finger protein 408 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH exudative vitreoretinopathy (ortholog); exudative vitreoretinopathy 1 (ortholog); exudative vitreoretinopathy 6 (ortholog); FOUND IN nucleus (ortholog) 5 65790126 65798652 - 116900867 MODEL JAAIVD010000023;XM_032902552 XP_032758443 protein-coding 626139643 LOC116910927 zinc finger protein ZFPM2-like 1 213910309 214194847 + 30032202 116910927 MODEL JAAIVD010000025;XM_032914678 XP_032770569 protein-coding 626139652 LOC116887193 40S ribosomal protein S25-like 1 220916839 220946517 - 116887193 MODEL JAAIVD010000025 pseudo 626139653 LOC116885835 legumain-like 16 39858123 39861359 - 116885835 MODEL JAAIVD010000004 pseudo 626139654 LOC116911983 ras-related protein Rab-1A-like 11 43949676 43957412 + 116911983 MODEL JAAIVD010000006 pseudo 626139655 Ormdl2 ORMDL sphingolipid biosynthesis regulator 2 INVOLVED IN ceramide metabolic process (ortholog); negative regulation of ceramide biosynthetic process (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 156291584 156294678 - 22301074;30032202 116906570 MODEL JAAIVD010000025;XM_032909293;XM_032909304 XP_032765184;XP_032765195 ORM1-like protein 2 protein-coding 626139667 Pbrm1 polybromo 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN blastocyst formation (ortholog); heart development (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN altered SWI/SNF family mediated chromatin remodeling pathway; histone modification pathway; pancreatic cancer pathway; ASSOCIATED WITH cholangiocarcinoma (ortholog); clear cell renal cell carcinoma (ortholog); colorectal cancer (ortholog); FOUND IN kinetochore (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 6719545 6818648 + 22301074;30032202 116914425 MODEL JAAIVD010000008;XM_032918695;XM_032918696;XM_032918697;XM_032918698;XM_032918700;XM_032918701;XM_032918702;XM_032918703;XM_032918704;XM_032918705;XM_032918706;XM_032918707;XM_032918708;XM_032918709;XM_032918710;XM_032918711;XM_032918712;XM_032918713;XM_032918714;XM_032918716;XM_032918717;XM_032918718;XM_032918719;XM_032918720;XM_032918721;XM_032918722;XM_032918723;XM_032918724 XP_032774586;XP_032774587;XP_032774588;XP_032774589;XP_032774591;XP_032774592;XP_032774593;XP_032774594;XP_032774595;XP_032774596;XP_032774597;XP_032774598;XP_032774599;XP_032774600;XP_032774601;XP_032774602;XP_032774603;XP_032774604;XP_032774605;XP_032774607;XP_032774608;XP_032774609;XP_032774610;XP_032774611;XP_032774612;XP_032774613;XP_032774614;XP_032774615 protein polybromo-1 protein-coding 626139743 LOC116888569 proline-rich protein 32-like X 77615340 77617309 - 116888569 MODEL JAAIVD010000014;XM_032889873 XP_032745764 protein-coding 626139749 Ankar ankyrin and armadillo repeat containing 4 121876248 121941536 + 22301074 116899357 MODEL JAAIVD010000003;XM_032901064;XM_032901065 XP_032756955;XP_032756956 ankyrin and armadillo repeat-containing protein protein-coding 626139776 Utp23 UTP23 small subunit processome component ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); INVOLVED IN endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH colorectal adenocarcinoma (ortholog) 1 226416054 226421426 - 22301074;30032202 116911372 MODEL JAAIVD010000025;XM_032915307 XP_032771198 rRNA-processing protein UTP23 homolog protein-coding 626139783 Puf60 poly(U) binding splicing factor 60 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH CHARGE syndrome (ortholog); Experimental Neoplasms (ortholog); genetic disease (ortholog); FOUND IN cell junction (ortholog); nucleoplasm (ortholog) 1 248388069 248399039 - 22301074;30032202 116912856 MODEL JAAIVD010000025;XM_032917073;XM_032917080;XM_032917088;XM_032917096;XM_032917108;XM_032917116 XP_032772964;XP_032772971;XP_032772979;XP_032772987;XP_032772999;XP_032773007 poly(U)-binding-splicing factor PUF60 protein-coding 626139813 LOC116886747 small nucleolar RNA SNORA40 17 33364108 33364225 - 116886747 MODEL JAAIVD010000011 pseudo 626139814 Derpc DERPC proline and glycine rich nuclear protein FOUND IN nucleoplasm (ortholog) 17 26607744 26610440 - 116886070 MODEL JAAIVD010000011;XM_032887383 XP_032743274 decreased expression in renal and prostate cancer protein protein-coding 626139819 LOC116883266 60S ribosomal protein L24-like 14 76889398 76891000 + 116883266 MODEL JAAIVD010000009 pseudo 626139820 LOC116900531 40S ribosomal protein S20-like 5 88615222 88615714 + 22301074;30032202 116900531 MODEL JAAIVD010000023;XM_032902258 XP_032758149 protein-coding 626139825 LOC116894757 jupiter microtubule associated homolog 1-like 2 171562691 171563488 - 116894757 MODEL JAAIVD010000001 pseudo 626139826 LOC116887871 high mobility group protein B1-like X 47439156 47452882 - 116887871 MODEL JAAIVD010000014 pseudo 626139827 LOC116899797 U7 small nuclear RNA 4 96373323 96373379 - 116899797 MODEL JAAIVD010000003 pseudo 626139828 LOC116894917 U7 small nuclear RNA 2 93639992 93640053 + 116894917 MODEL JAAIVD010000001;XR_004387118 snrna 626139831 Anxa9 annexin A9 ENCODES a protein that exhibits acetylcholine receptor activity (ortholog); phosphatidylserine binding (ortholog); phospholipid binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); FOUND IN cell surface (ortholog); cytosol (ortholog); lateral plasma membrane (ortholog) 3 61941870 61950740 + 22301074;30032202 116896559 MODEL JAAIVD010000012;XM_032897754 XP_032753645 protein-coding 626139847 LOC116894827 U4 spliceosomal RNA 2 153642533 153642616 + 116894827 MODEL JAAIVD010000001 pseudo 626139848 Tmem150c transmembrane protein 150C ENCODES a protein that exhibits mechanosensitive monoatomic cation channel activity (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); proprioception (ortholog); FOUND IN plasma membrane (ortholog) 11 10318633 10391829 - 116912238 MODEL JAAIVD010000006;XM_032916216;XM_032916217 XP_032772107;XP_032772108 protein-coding 626139863 Tlr9 toll like receptor 9 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); pattern recognition receptor activity (ortholog); siRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); cellular response to chloroquine (ortholog); PARTICIPATES IN Toll-like receptor signaling pathway; ASSOCIATED WITH Achlorhydria (ortholog); acute kidney failure (ortholog); acute necrotizing pancreatitis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 8 97529494 97533609 + 22301074;30032202 116908044 MODEL JAAIVD010000027;XM_032911318 XP_032767209 toll-like receptor 9 protein-coding 626139869 Siah3 siah E3 ubiquitin protein ligase family member 3 INVOLVED IN negative regulation of protein targeting to mitochondrion (ortholog); regulation of protein stability (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 12 48874460 48940024 - 22301074;30032202 116913559 MODEL JAAIVD010000007;XM_032917768 XP_032773659 seven in absentia homolog 3 protein-coding 626139875 LOC116904780 small nucleolar RNA SNORD86 6 150805481 150805566 - 116904780 MODEL JAAIVD010000024;XR_004388444 snorna 626139878 Pcf11 PCF11 cleavage and polyadenylation factor subunit ENCODES a protein that exhibits RNA polymerase II complex binding (ortholog); INVOLVED IN termination of RNA polymerase II transcription (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; ASSOCIATED WITH acute megakaryocytic leukemia (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 108518762 108545318 + 22301074;30032202 116891846 MODEL JAAIVD010000001;XM_032893213;XM_032893215 XP_032749104;XP_032749106 pre-mRNA cleavage complex 2 protein Pcf11 protein-coding 626139902 LOC116890178 mucin-like protein 2 1 259372304 259376025 + 116890178 MODEL JAAIVD010000025;XM_032890914 XP_032746805 protein-coding 626139910 Dync1li2 dynein cytoplasmic 1 light intermediate chain 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); centrosome localization (ortholog); microtubule cytoskeleton organization (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH Weight Gain (ortholog); FOUND IN centrosome (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) 17 12700473 12723378 - 30032202 116886052 MODEL JAAIVD010000011;XM_032887355;XM_032887356;XM_032887357 XP_032743246;XP_032743247;XP_032743248 cytoplasmic dynein 1 light intermediate chain 2 protein-coding 626139935 LOC116898408 60S acidic ribosomal protein P1-like 4 84518931 84519416 - 116898408 MODEL JAAIVD010000003 pseudo 626139936 C2H16orf54 chromosome 2 C16orf54 homolog ASSOCIATED WITH COVID-19 (ortholog) 2 74799156 74801702 - 116893900 MODEL JAAIVD010000001;XM_032895623;XM_032895624 XP_032751514;XP_032751515 transmembrane protein C16orf54 homolog protein-coding 626139946 C1H1orf122 chromosome 1 C1orf122 homolog 1 33445584 33446697 + 116896870 MODEL JAAIVD010000025;XM_032898406 XP_032754297 uncharacterized protein C1orf122 homolog protein-coding 626139953 Galnt7 polypeptide N-acetylgalactosaminyltransferase 7 ENCODES a protein that exhibits polypeptide N-acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation (ortholog) 13 31238309 31361760 + 30032202 116914855 MODEL JAAIVD010000008;XM_032919306;XM_032919307 XP_032775197;XP_032775198 N-acetylgalactosaminyltransferase 7 protein-coding 626139973 Serinc1 serine incorporator 1 ENCODES a protein that exhibits acetyltransferase activator activity (ortholog); enzyme binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN membrane biogenesis (ortholog); phosphatidylserine metabolic process (ortholog); sphingolipid metabolic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); plasma membrane (ortholog) 18 34200806 34219682 - 22301074;30032202 116887699 MODEL JAAIVD010000013;XM_032889293 XP_032745184 protein-coding 626139987 LOC116893476 vomeronasal type-1 receptor 4-like 2 180603470 180623844 + 22301074;30032202 116893476 MODEL JAAIVD010000001;XM_032895232 XP_032751123 protein-coding 626139991 LOC116895982 heat shock protein HSP 90-beta-like 3 160301924 160315723 - 116895982 MODEL JAAIVD010000012 pseudo 626139992 LOC116892769 COP9 signalosome complex subunit 7b-like 2 182674545 182675352 + 116892769 MODEL JAAIVD010000001 pseudo 626139993 LOC116894522 vomeronasal type-1 receptor 4-like 2 175038997 175039935 - 22301074;30032202 116894522 MODEL JAAIVD010000001;XM_032896223 XP_032752114 protein-coding 626139997 Klhl3 kelch like family member 3 ENCODES a protein that exhibits cullin family protein binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN distal tubule morphogenesis (ortholog); gene expression (ortholog); monoatomic ion homeostasis (ortholog); ASSOCIATED WITH autosomal dominant pseudohypoaldosteronism type 1 (ortholog); cerebral palsy (ortholog); genetic disease (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytosol (ortholog) 14 79999429 80115537 + 22301074;30032202 116883589 MODEL JAAIVD010000009;XM_032884769;XM_032884770 XP_032740660;XP_032740661 kelch-like protein 3 protein-coding 626140018 LOC116893618 keratin-associated protein 5-2-like 2 7313270 7321289 - 116893618 MODEL JAAIVD010000001 pseudo 626140019 Gpr176 G protein-coupled receptor 176 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); circadian behavior (ortholog); G protein-coupled receptor signaling pathway (ortholog); FOUND IN plasma membrane (ortholog) 5 96425031 96520066 - 22301074;30032202 116901776 MODEL JAAIVD010000023;XM_032903916;XM_032903917 XP_032759807;XP_032759808 G-protein coupled receptor 176 protein-coding 626140030 Ctsz cathepsin Z ENCODES a protein that exhibits carboxypeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN epithelial tube branching involved in lung morphogenesis (ortholog); negative regulation of plasminogen activation (ortholog); proteolysis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cell cortex (ortholog); cell surface (ortholog); cytoplasmic vesicle (ortholog) 5 143541082 143551865 + 30032202 116902266 MODEL JAAIVD010000023;XM_032904686 XP_032760577 protein-coding 626140040 LOC116893390 60S ribosomal protein L10-like 1 27760289 27762248 + 116893390 MODEL JAAIVD010000025 pseudo 626140041 LOC116884387 uncharacterized LOC116884387 15 57594265 57595726 - 22301074 116884387 MODEL JAAIVD010000010;XM_032885499 XP_032741390 uncharacterized protein LOC116884387 protein-coding 626140045 Klk7 kallikrein related peptidase 7 ENCODES a protein that exhibits peptidase activity (ortholog); INVOLVED IN positive regulation of antibacterial peptide production (ortholog); FOUND IN cornified envelope (ortholog); epidermal lamellar body (ortholog); extracellular space (ortholog) 2 155575637 155579819 - 22301074;30032202 116892224 MODEL JAAIVD010000001;XM_032893788 XP_032749679 kallikrein-7 protein-coding 626140053 LOC116889265 olfactory receptor 13C3-like 1 127349855 127350889 + 22301074 116889265 MODEL JAAIVD010000025;XM_032890410 XP_032746301 protein-coding 626140057 LOC116888851 L-lactate dehydrogenase A chain-like 1 105758787 105759774 - 116888851 MODEL JAAIVD010000025 pseudo 626140058 LOC116907475 von Willebrand factor A domain-containing protein 5A-like 8 82377327 82393613 - 116907475 MODEL JAAIVD010000027;XM_032910461 XP_032766352 protein-coding 626140079 Angptl7 angiopoietin like 7 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of vasculature development involved in avascular cornea development in camera-type eye (ortholog); regulation of extracellular matrix organization (ortholog); FOUND IN extracellular region (ortholog) 1 12271210 12275276 + 30032202 116892800 MODEL JAAIVD010000025;XM_032894677 XP_032750568 angiopoietin-related protein 7 protein-coding 626140087 LOC116889228 melanoma-associated antigen B2-like X 50118424 50119558 + 116889228 MODEL JAAIVD010000014 pseudo 626140088 LOC116890002 apolipoprotein L2-like 1 249765320 249782932 - 116890002 MODEL JAAIVD010000025;XR_004386521 pseudo 626140096 LOC116901142 uncharacterized LOC116901142 5 3068346 3071176 + 116901142 MODEL JAAIVD010000023;XR_004387959 ncrna 626140100 LOC116898124 zinc finger protein 706-like 4 107480190 107480439 - 116898124 MODEL JAAIVD010000003 pseudo 626140101 LOC116893947 60S ribosomal protein L23a-like 2 93928783 93929259 + 22301074;30032202 116893947 MODEL JAAIVD010000001;XM_032895662 XP_032751553 protein-coding 626140105 Clmn calmin INVOLVED IN negative regulation of cell population proliferation (ortholog); neuron projection development (ortholog); FOUND IN cytoplasm (ortholog) 7 115861274 115954991 - 30032202 116905386 MODEL JAAIVD010000026;XM_032908329;XM_032908330;XM_032908331 XP_032764220;XP_032764221;XP_032764222 protein-coding 626140127 Erbb4 erb-b2 receptor tyrosine kinase 4 ENCODES a protein that exhibits epidermal growth factor receptor activity (ortholog); epidermal growth factor receptor binding (ortholog); GABA receptor binding (ortholog); INVOLVED IN cardiac muscle tissue regeneration (ortholog); cell fate commitment (ortholog); cell migration (ortholog); PARTICIPATES IN epidermal growth factor/neuregulin signaling pathway; ASSOCIATED WITH amblyopia (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 10 (ortholog); FOUND IN basolateral plasma membrane (ortholog); caveola (ortholog); dendrite (ortholog) 4 141876458 142135678 - 22301074;30032202 116898530 MODEL JAAIVD010000003;XM_032899750 XP_032755641 receptor tyrosine-protein kinase erbB-4 protein-coding 626140148 LOC116893690 olfactory receptor 5B2-like 2 12934429 12935352 - 22301074;30032202 116893690 MODEL JAAIVD010000001;XM_032895407 XP_032751298 protein-coding 626140152 Fbxo32 F-box protein 32 INVOLVED IN cellular response to dexamethasone stimulus (ortholog); muscle atrophy (ortholog); negative regulation of cardiac muscle hypertrophy (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); muscular atrophy (ortholog); primary pulmonary hypertension (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 232735477 232768923 - 22301074;30032202 116911764 MODEL JAAIVD010000025;XM_032915761 XP_032771652 F-box only protein 32 protein-coding 626140165 Gadd45a growth arrest and DNA damage inducible alpha ENCODES a protein that exhibits kinase binding (ortholog); promoter-specific chromatin binding (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); cellular response to mechanical stimulus (ortholog); centrosome cycle (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Chloracne (ortholog); human immunodeficiency virus infectious disease (ortholog); FOUND IN cytoplasm (ortholog); nuclear speck (ortholog); nucleus (ortholog) 6 76571662 76573976 - 30032202 116903703 MODEL JAAIVD010000024;XM_032906379 XP_032762270 growth arrest and DNA damage-inducible protein GADD45 alpha protein-coding 626140173 LOC116896516 histone H2B type 2-F 3 61012364 61013308 - 22301074;30032202 116896516 MODEL JAAIVD010000012;XM_032897698 XP_032753589 protein-coding 626140178 LOC116889804 protein mono-ADP-ribosyltransferase PARP4-like 116889804 MODEL JAAIVD010000643;XM_032890651 XP_032746542 protein-coding 626140179 Bloc1s2 biogenesis of lysosomal organelles complex 1 subunit 2 ENCODES a protein that exhibits gamma-tubulin binding (ortholog); transcription factor binding (ortholog); INVOLVED IN anterograde axonal transport (ortholog); anterograde synaptic vesicle transport (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Sciatica (ortholog); FOUND IN BLOC-1 complex (ortholog); BORC complex (ortholog); centrosome (ortholog) 2 43669626 43676631 - 30032202 116891208 MODEL JAAIVD010000001;XM_032892036;XM_032892037;XM_032892039;XM_032892040 XP_032747927;XP_032747928;XP_032747930;XP_032747931 biogenesis of lysosome-related organelles complex 1 subunit 2 protein-coding 626140197 LOC116910313 transmembrane protein 92-like 9 50757900 50760473 + 30032202 116910313 MODEL JAAIVD010000002;XM_032914177 XP_032770068 protein-coding 626140204 Bin3 bridging integrator 3 INVOLVED IN intracellular protein localization (ortholog); myoblast migration involved in skeletal muscle regeneration (ortholog); regulation of lamellipodium assembly (ortholog); FOUND IN actin cytoskeleton (ortholog) 12 54209806 54247780 - 22301074;30032202 116913061 MODEL JAAIVD010000007;XM_032917190 XP_032773081 protein-coding 626140217 Nsdhl NAD(P) dependent 3-beta-hydroxysteroid dehydrogenase NSDHL ENCODES a protein that exhibits 3-beta-hydroxysteroid dehydrogenase [NAD(P)+]/C4-decarboxylase activity (ortholog); INVOLVED IN cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; ASSOCIATED WITH Bloch-Sulzberger syndrome (ortholog); CHILD syndrome (ortholog); CK syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) X 129433009 129456162 - 22301074 116888355 MODEL JAAIVD010000014;XM_032889624 XP_032745515 sterol-4-alpha-carboxylate 3-dehydrogenase, decarboxylating protein-coding 626140229 LOC116890284 60S acidic ribosomal protein P2-like 1 22380209 22381268 + 116890284 MODEL JAAIVD010000025 pseudo 626140230 LOC116885053 small nucleolar RNA SNORA17 15 40936094 40936233 - 116885053 MODEL JAAIVD010000010 pseudo 626140231 LOC116892774 lys-63-specific deubiquitinase BRCC36-like 2 183260780 183261649 + 116892774 MODEL JAAIVD010000001 pseudo 626140232 LOC116892055 vomeronasal type-1 receptor 4-like 2 143659013 143659955 + 116892055 MODEL JAAIVD010000001 pseudo 626140233 LOC116904826 U6 spliceosomal RNA 6 22925057 22925162 - 116904826 MODEL JAAIVD010000024;XR_004388475 snrna 626140236 Sting1 stimulator of interferon response cGAMP interactor 1 ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP binding (ortholog); cyclic-di-GMP binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); antiviral innate immune response (ortholog); autophagosome assembly (ortholog); ASSOCIATED WITH Animal Toxoplasmosis (ortholog); brucellosis (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN autophagosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 15 8632773 8639865 + 22301074;30032202 116884821 MODEL JAAIVD010000010;XM_032886051;XM_032886052 XP_032741942;XP_032741943 stimulator of interferon genes protein protein-coding 626140250 LOC116890311 U4 spliceosomal RNA 1 71879015 71879123 + 116890311 MODEL JAAIVD010000025 pseudo 626140251 Pklr pyruvate kinase L/R ENCODES a protein that exhibits monosaccharide binding (ortholog); pyruvate kinase activity (ortholog); INVOLVED IN cellular response to epinephrine stimulus (ortholog); cellular response to insulin stimulus (ortholog); glycolytic process (ortholog); PARTICIPATES IN Fanconi syndrome pathway; forkhead class A signaling pathway; glycogen storage disease type VII pathway; ASSOCIATED WITH Burns (ortholog); congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 2 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 3 64530851 64540355 - 22301074;30032202 116896667 MODEL JAAIVD010000012;XM_032898026;XM_032898027 XP_032753917;XP_032753918 pyruvate kinase PKLR protein-coding 626140268 Ndufs7 NADH:ubiquinone oxidoreductase core subunit S7 ENCODES a protein that exhibits monooxygenase activity (ortholog); NADH dehydrogenase (ubiquinone) activity (ortholog); NADH dehydrogenase activity (ortholog); INVOLVED IN mitochondrial electron transport, NADH to ubiquinone (ortholog); mitochondrial respiratory chain complex I assembly (ortholog); PARTICIPATES IN doxorubicin pharmacokinetics pathway; ASSOCIATED WITH bipolar disorder (ortholog); COVID-19 (ortholog); developmental disorder of mental health (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); neuronal cell body (ortholog) 1 154625336 154633009 - 22301074;30032202 116905248 MODEL JAAIVD010000025;XM_032908095 XP_032763986 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial protein-coding 626140281 LOC116897878 peroxiredoxin-6-like 4 23769158 23769825 + 116897878 MODEL JAAIVD010000003 pseudo 626140282 Fcrla Fc receptor like A FOUND IN cytoplasm (ortholog) 10 50110147 50119742 - 30032202 116911260 MODEL JAAIVD010000005;XM_032915163;XM_032915164 XP_032771054;XP_032771055 Fc receptor-like A protein-coding 626140296 Gtpbp3 GTP binding protein 3, mitochondrial ENCODES a protein that exhibits GTPase activity (ortholog); tRNA 5-taurinomethyluridine synthase activity (ortholog); INVOLVED IN mitochondrial tRNA wobble uridine modification (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 23 (ortholog); genetic disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleus (ortholog) 13 13494155 13499884 - 22301074;30032202 116914733 MODEL JAAIVD010000008;XM_032919169 XP_032775060 tRNA modification GTPase GTPBP3, mitochondrial protein-coding 626140309 Rilpl1 Rab interacting lysosomal protein like 1 INVOLVED IN epithelial cell morphogenesis (ortholog); nitric oxide mediated signal transduction (ortholog); protein transport from ciliary membrane to plasma membrane (ortholog); ASSOCIATED WITH oculopharyngodistal myopathy 4 (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 16 29341810 29379293 + 22301074;30032202 116885585 MODEL JAAIVD010000004;XM_032886882 XP_032742773 RILP-like protein 1 protein-coding 626140320 LOC116905251 uncharacterized LOC116905251 7 97725086 97726502 - 116905251 MODEL JAAIVD010000026;XR_004388504 ncrna 626140324 Commd4 COMM domain containing 4 FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 8 51071045 51074346 - 116907502 MODEL JAAIVD010000027;XM_032910497;XM_032910499;XM_032910500 XP_032766388;XP_032766390;XP_032766391 COMM domain-containing protein 4 protein-coding 626140342 Parva parvin alpha ENCODES a protein that exhibits actin binding (ortholog); protein kinase inhibitor activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin-mediated cell contraction (ortholog); cell adhesion (ortholog); PARTICIPATES IN integrin mediated signaling pathway; ASSOCIATED WITH substance-related disorder (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 88905633 89061047 - 22301074;30032202 116891646 MODEL JAAIVD010000001;XM_032892879 XP_032748770 alpha-parvin protein-coding 626140359 LOC116914001 aspartate aminotransferase, mitochondrial-like 12 22616723 22617954 + 116914001 MODEL JAAIVD010000007 pseudo 626140360 LOC116898286 40S ribosomal protein S17-like 4 169549090 169549543 + 22301074;30032202 116898286 MODEL JAAIVD010000003;XM_032899637 XP_032755528 protein-coding 626140365 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42539501 42539572 + 116884236 MODEL JAAIVD010000009 trna 626140366 Aimp2 aminoacyl tRNA synthetase complex interacting multifunctional protein 2 ENCODES a protein that exhibits molecular adaptor activity (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN negative regulation of cell population proliferation (ortholog); positive regulation of neuron apoptotic process (ortholog); positive regulation of protein ubiquitination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); genetic disease (ortholog); hypomyelinating leukodystrophy 17 (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytosol (ortholog); nucleus (ortholog) 16 9268658 9278335 + 30032202 116885868 MODEL JAAIVD010000004;XM_032887193;XM_032887194 XP_032743084;XP_032743085 aminoacyl tRNA synthase complex-interacting multifunctional protein 2 protein-coding 626140376 LOC116889413 ras GTPase-activating protein-binding protein 1-like 1 136423510 136424988 - 116889413 MODEL JAAIVD010000025 pseudo 626140377 LOC116894311 40S ribosomal protein S18-like 1 21714279 21714771 + 116894311 MODEL JAAIVD010000025 pseudo 626140378 LOC116902792 40S ribosomal protein S12-like 6 77591381 77591849 - 22301074;30032202 116902792 MODEL JAAIVD010000024;XM_032905129 XP_032761020 protein-coding 626140383 Gas8 growth arrest specific 8 ENCODES a protein that exhibits microtubule binding (ortholog); small GTPase binding (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cilium movement involved in cell motility (ortholog); ASSOCIATED WITH Fanconi anemia (ortholog); genetic disease (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN 9+2 motile cilium (ortholog); axoneme (ortholog); ciliary basal body (ortholog) 17 43117806 43131218 + 22301074;30032202 116886452 MODEL JAAIVD010000011;XM_032887952 XP_032743843 dynein regulatory complex subunit 4 protein-coding 626140396 Ern1 endoplasmic reticulum to nucleus signaling 1 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); endonuclease activity (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute-On-Chronic Liver Failure (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN AIP1-IRE1 complex (ortholog); cytoplasm (ortholog); endoplasmic reticulum (ortholog) 9 72633725 72724357 + 22301074;30032202 116908789 MODEL JAAIVD010000002;XM_032912182 XP_032768073 serine/threonine-protein kinase/endoribonuclease IRE1 protein-coding 626140422 LOC116897603 small nucleolar RNA SNORA17 3 131434030 131434141 + 116897603 MODEL JAAIVD010000012 pseudo 626140423 Smc4 structural maintenance of chromosomes 4 ENCODES a protein that exhibits chromatin binding (ortholog); single-stranded DNA binding (ortholog); INVOLVED IN kinetochore organization (ortholog); meiotic chromosome condensation (ortholog); meiotic chromosome segregation (ortholog); FOUND IN chromosome, centromeric region (ortholog); condensed nuclear chromosome (ortholog); condensin complex (ortholog) 3 86275819 86304229 - 22301074;30032202 116896796 MODEL JAAIVD010000012;XM_032898266;XM_032898267 XP_032754157;XP_032754158 structural maintenance of chromosomes protein 4 protein-coding 626140455 LOC116889435 U6 spliceosomal RNA X 117014936 117015044 - 116889435 MODEL JAAIVD010000014;XR_004386397 snrna 626140458 LOC116900725 uncharacterized LOC116900725 1 71150638 71188903 - 116900725 MODEL JAAIVD010000025;XR_004387945 ncrna 626140462 Coprs coordinator of PRMT5 and differentiation stimulator ENCODES a protein that exhibits histone binding (ortholog); INVOLVED IN blastocyst hatching (ortholog); chromatin remodeling (ortholog); muscle organ development (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 13 69886331 69891827 + 22301074;30032202 116914815 MODEL JAAIVD010000008;XM_032919272 XP_032775163 protein-coding 626140470 Meig1 meiosis/spermiogenesis associated 1 INVOLVED IN intracellular protein localization (ortholog); manchette assembly (ortholog); sperm axoneme assembly (ortholog); FOUND IN cytosol (ortholog); manchette (ortholog); nucleus (ortholog) 14 9860738 9872801 - 22301074;30032202 116883989 MODEL JAAIVD010000009;XM_032885226 XP_032741117 meiosis expressed gene 1 protein homolog protein-coding 626140477 LOC116894302 COMM domain-containing protein 9-like 2 139707364 139707962 - 116894302 MODEL JAAIVD010000001 pseudo 626140478 LOC116906143 androgen-dependent TFPI-regulating protein-like 7 93297442 93298201 + 116906143 MODEL JAAIVD010000026 pseudo 626140479 Grem2 gremlin 2, DAN family BMP antagonist ENCODES a protein that exhibits BMP binding (ortholog); heparin binding (ortholog); identical protein binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); determination of dorsal identity (ortholog); embryonic body morphogenesis (ortholog); ASSOCIATED WITH Selective Tooth Agenesis 9 (ortholog); FOUND IN extracellular space (ortholog) 10 53411273 53414827 - 30032202 116911444 MODEL JAAIVD010000005;XM_032915412 XP_032771303 gremlin-2 protein-coding 626140484 LOC116883586 uncharacterized LOC116883586 14 42553492 42601870 + 22301074;30032202 116883586 MODEL JAAIVD010000009;XM_032884766 XP_032740657 uncharacterized protein LOC116883586 protein-coding 626140492 LOC116909140 uncharacterized LOC116909140 9 75087596 75096543 - 116909140 MODEL JAAIVD010000002;XR_004389052 ncrna 626140497 LOC116898223 C-X-C chemokine receptor type 1 4 147641318 147642381 - 22301074;30032202 116898223 MODEL JAAIVD010000003;XM_032899578 XP_032755469 protein-coding 626140501 Klhl36 kelch like family member 36 ENCODES a protein that exhibits cullin family protein binding (ortholog) 17 39519925 39531829 + 30032202 116886469 MODEL JAAIVD010000011;XM_032887971 XP_032743862 kelch-like protein 36 protein-coding 626140509 Tmem121 transmembrane protein 121 ASSOCIATED WITH myoepithelioma (ortholog) 7 130785306 130788915 + 116905532 MODEL JAAIVD010000026;XM_032908569;XM_032908570 XP_032764460;XP_032764461 protein-coding 626140518 LOC116887779 Z6 small nucleolar RNA 18 1215270 1215366 - 116887779 MODEL JAAIVD010000013;XR_004386276 snorna 626140521 Srcap Snf2 related CREBBP activator protein PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH 46, XY Disorders of Sex Development (ortholog); adenoid cystic carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN Golgi apparatus (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 74341504 74390396 - 22301074;30032202 116891468 MODEL JAAIVD010000001;XM_032892562;XM_032892563;XM_032892564;XM_032892565 XP_032748453;XP_032748454;XP_032748455;XP_032748456 helicase SRCAP protein-coding 626140566 Kiaa0319 KIAA0319 ortholog INVOLVED IN central nervous system neuron development (ortholog); multicellular organismal response to stress (ortholog); negative regulation of axon extension (ortholog); FOUND IN early endosome (ortholog); plasma membrane (ortholog) 14 43900258 43951075 + 30032202 116883379 MODEL JAAIVD010000009;XM_032884493 XP_032740384 dyslexia-associated protein KIAA0319 homolog protein-coding 626140589 Reep3 receptor accessory protein 3 INVOLVED IN mitotic nuclear membrane reassembly (ortholog); nuclear envelope organization (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); autistic disorder (ortholog) 18 19725465 19809743 + 30032202 116887674 MODEL JAAIVD010000013;XM_032889268 XP_032745159 receptor expression-enhancing protein 3 protein-coding 626140601 LOC116910879 stress-induced-phosphoprotein 1-like 10 58356836 58358608 - 116910879 MODEL JAAIVD010000005 pseudo 626140602 LOC116888843 uncharacterized LOC116888843 X 126528235 126541956 + 116888843 MODEL JAAIVD010000014;XR_004386342;XR_004386343;XR_004386344;XR_004386345 ncrna 626140615 LOC116905872 serpin A9 7 115052326 115069457 - 30032202 116905872 MODEL JAAIVD010000026;XM_032908861 XP_032764752 protein-coding 626140624 LOC116895286 S-formylglutathione hydrolase-like 3 12779826 12780660 - 116895286 MODEL JAAIVD010000012 pseudo 626140625 LOC116888639 protein kinase C and casein kinase substrate in neurons protein 2-like X 92142053 92143569 + 116888639 MODEL JAAIVD010000014 pseudo 626140626 Necab3 N-terminal EF-hand calcium binding protein 3 INVOLVED IN regulation of amyloid precursor protein biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 5 133911962 133926295 - 22301074;30032202 116902161 MODEL JAAIVD010000023;XM_032904500;XM_032904502 XP_032760391;XP_032760393 N-terminal EF-hand calcium-binding protein 3 protein-coding 626140644 Rnf185 ring finger protein 185 ENCODES a protein that exhibits protein-containing complex binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); defense response to virus (ortholog); ERAD pathway (ortholog); FOUND IN endoplasmic reticulum (ortholog) 11 72412171 72448329 - 22301074;30032202 116912331 MODEL JAAIVD010000006;XM_032916376;XM_032916377 XP_032772267;XP_032772268 E3 ubiquitin-protein ligase RNF185 protein-coding 626140658 LOC116884049 lysozyme-like protein 1 14 30569690 30582711 + 22301074 116884049 MODEL JAAIVD010000009;XM_032885295 XP_032741186 protein-coding 626140667 Depdc1b DEP domain containing 1B INVOLVED IN cell migration (ortholog); positive regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog) 3 188576102 188645001 - 22301074;30032202 116895661 MODEL JAAIVD010000012;XM_032896867 XP_032752758 DEP domain-containing protein 1B protein-coding 626140682 Pmepa1 prostate transmembrane protein, androgen induced 1 ENCODES a protein that exhibits protein sequestering activity (ortholog); R-SMAD binding (ortholog); WW domain binding (ortholog); INVOLVED IN negative regulation of SMAD protein signal transduction (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); ASSOCIATED WITH breast cancer (ortholog); connective tissue disease (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN early endosome membrane (ortholog); endosome membrane (ortholog); Golgi membrane (ortholog) 5 144716573 144763838 + 30032202 116902278 MODEL JAAIVD010000023;XM_032904708 XP_032760599 protein TMEPAI protein-coding 626140690 LOC116903134 prothymosin alpha-like 6 7750715 7751047 + 116903134 MODEL JAAIVD010000024 pseudo 626140691 LOC116883540 40S ribosomal protein S14-like 14 29149018 29149473 + 22301074;30032202 116883540 MODEL JAAIVD010000009;XM_032884711 XP_032740602 protein-coding 626140694 LOC116895421 40S ribosomal protein S23-like 3 63184810 63185178 - 116895421 MODEL JAAIVD010000012 pseudo 626140695 Mia MIA SH3 domain containing INVOLVED IN cell-matrix adhesion (ortholog); extracellular matrix organization (ortholog); ASSOCIATED WITH Femur Head Necrosis (ortholog); Stomach Neoplasms (ortholog) 2 168760704 168762961 + 22301074;30032202 116894474 MODEL JAAIVD010000001;XM_032896185 XP_032752076 melanoma-derived growth regulatory protein protein-coding 626140703 LOC116890560 uncharacterized LOC116890560 1 272849424 272943088 + 116890560 MODEL JAAIVD010000025;XM_032891012 XP_032746903 uncharacterized protein LOC116890560 protein-coding 626140710 Ovol1 ovo like transcriptional repressor 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN epidermis development (ortholog); germline cell cycle switching, mitotic to meiotic cell cycle (ortholog); kidney development (ortholog); ASSOCIATED WITH atopic dermatitis (ortholog); pilomatrixoma (ortholog); FOUND IN nucleus (ortholog) 2 2115669 2127041 + 30032202 116890720 MODEL JAAIVD010000001;XM_032891170;XM_032891171 XP_032747061;XP_032747062 putative transcription factor Ovo-like 1 protein-coding 626140723 LOC116897244 uncharacterized LOC116897244 3 196475704 196477812 + 116897244 MODEL JAAIVD010000012;XR_004387403;XR_004387404 ncrna 626140730 Sox3 SRY-box transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); face development (ortholog); forebrain development (ortholog); ASSOCIATED WITH hydrocephalus (ortholog); hypopituitarism (ortholog); INTELLECTUAL DEVELOPMENTAL DISORDER, X-LINKED, WITH PANHYPOPITUITARISM (ortholog); FOUND IN nucleoplasm (ortholog) X 119942496 119944549 - 30032202 116888692 MODEL JAAIVD010000014;XM_032889982 XP_032745873 transcription factor SOX-3 protein-coding 626140734 LOC116900576 olfactory receptor 4F15-like 5 90348329 90349255 - 22301074 116900576 MODEL JAAIVD010000023;XM_032902299 XP_032758190 protein-coding 626140737 Slc35a4 solute carrier family 35 member A4 INVOLVED IN positive regulation of cellular respiration (ortholog); positive regulation of translation in response to stress (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog); mitochondrial inner membrane (ortholog) 15 7704145 7708349 - 22301074;30032202 116884344 MODEL JAAIVD010000010;XM_032885477;XM_032885478;XM_032885479 XP_032741368;XP_032741369;XP_032741370 probable UDP-sugar transporter protein SLC35A4 protein-coding 626140753 LOC116890599 small nucleolar RNA SNORA17 1 14961567 14961715 - 116890599 MODEL JAAIVD010000025 pseudo 626140754 Trnam-cau transfer RNA methionine (anticodon CAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42552714 42552785 - 116884195 MODEL JAAIVD010000009 trna 626140755 Marcks myristoylated alanine rich protein kinase C substrate ENCODES a protein that exhibits actin filament binding (ortholog); calmodulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); actin filament organization (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Experimental Seizures (ortholog); Lung Neoplasms (ortholog); FOUND IN actin filament bundle (ortholog); axon terminus (ortholog); bleb (ortholog) 18 37167611 37173354 - 22301074;30032202 116887003 MODEL JAAIVD010000013;XM_032888486 XP_032744377 myristoylated alanine-rich C-kinase substrate protein-coding 626140761 LOC116890320 U6 spliceosomal RNA 1 260703457 260703563 + 116890320 MODEL JAAIVD010000025;XR_004386543 snrna 626140764 LOC116905809 uncharacterized LOC116905809 7 95726019 95738792 + 116905809 MODEL JAAIVD010000026;XR_004388568 ncrna 626140768 LOC116883891 non-histone chromosomal protein HMG-14-like 14 26201758 26203069 - 116883891 MODEL JAAIVD010000009 pseudo 626140769 Rbms1 RNA binding motif single stranded interacting protein 1 FOUND IN cytosol (ortholog) 5 38393248 38608607 - 22301074;30032202 116901442 MODEL JAAIVD010000023;XM_032903370;XM_032903371;XM_032903372;XM_032903373;XM_032903374;XM_032903375 XP_032759261;XP_032759262;XP_032759263;XP_032759264;XP_032759265;XP_032759266 RNA-binding motif, single-stranded-interacting protein 1 protein-coding 626140801 LOC116890263 MLV-related proviral Env polyprotein-like 1 13296045 13297829 + 116890263 MODEL JAAIVD010000025 pseudo 626140802 LOC116883868 uncharacterized LOC116883868 14 6066959 6070606 - 116883868 MODEL JAAIVD010000009;XR_004385800 ncrna 626140806 Tmem268 transmembrane protein 268 1 90000458 90024310 - 116901242 MODEL JAAIVD010000025;XM_032902997 XP_032758888 protein-coding 626140820 LOC116913837 asparagine--tRNA ligase, cytoplasmic-like 12 2977183 2978642 - 116913837 MODEL JAAIVD010000007 pseudo 626140821 LOC116898195 nucleolar protein 16-like 4 137122700 137124099 - 116898195 MODEL JAAIVD010000003 pseudo 626140822 C9H5orf47 chromosome 9 C5orf47 homolog 9 3957724 3968919 - 116910472 MODEL JAAIVD010000002;XM_032914344 XP_032770235 uncharacterized protein C5orf47 homolog protein-coding 626140829 LOC116902212 uncharacterized protein RAB5IF homolog 5 136193629 136203620 + 30032202 116902212 MODEL JAAIVD010000023;XM_032904613 XP_032760504 protein-coding 626140837 LOC116914897 heterogeneous nuclear ribonucleoprotein A3-like 13 63078864 63079894 + 116914897 MODEL JAAIVD010000008 pseudo 626140838 LOC116889889 NACHT, LRR and PYD domains-containing protein 4A-like 1 158496960 158516049 + 22301074;30032202 116889889 MODEL JAAIVD010000025;XM_032890712;XM_032890713 XP_032746603;XP_032746604 protein-coding 626140852 LOC116904802 U4 spliceosomal RNA 6 24551081 24551193 - 116904802 MODEL JAAIVD010000024 pseudo 626140853 Ppp1r3g protein phosphatase 1 regulatory subunit 3G ENCODES a protein that exhibits glycogen binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN glucose homeostasis (ortholog); positive regulation of glycogen biosynthetic process (ortholog); FOUND IN cytoplasm (ortholog); protein phosphatase type 1 complex (ortholog) 14 55060919 55062860 + 30032202 116883419 MODEL JAAIVD010000009;XM_032884547 XP_032740438 protein-coding 626140858 Sdhaf1 succinate dehydrogenase complex assembly factor 1 INVOLVED IN mitochondrial respiratory chain complex II assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex II deficiency (ortholog); Mitochondrial Complex II Deficiency Nuclear Type 1 (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 2 165684522 165685504 + 22301074;30032202 116892322 MODEL JAAIVD010000001;XM_032893946 XP_032749837 succinate dehydrogenase assembly factor 1, mitochondrial protein-coding 626140863 LOC116888024 uncharacterized LOC116888024 X 81602478 81620301 + 30032202 116888024 MODEL JAAIVD010000014;XM_032889433 XP_032745324 uncharacterized protein LOC116888024 protein-coding 626140872 Frk fyn related Src family tyrosine kinase ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN cell differentiation (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of innate immune response (ortholog); ASSOCIATED WITH glucose intolerance (ortholog); Goldenhar syndrome (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 18 35859903 35956920 - 22301074;30032202 116887269 MODEL JAAIVD010000013;XM_032888839 XP_032744730 tyrosine-protein kinase FRK protein-coding 626140884 LOC116899008 uncharacterized LOC116899008 4 53857394 53858888 - 116899008 MODEL JAAIVD010000003;XR_004387681 ncrna 626140888 LOC116894947 small nucleolar RNA Z195/SNORD33/SNORD32 family 2 154416554 154416636 + 116894947 MODEL JAAIVD010000001;XR_004387143 snorna 626140891 Foxn1 forkhead box N1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN blood vessel morphogenesis (ortholog); epidermis development (ortholog); hair follicle development (ortholog); ASSOCIATED WITH alopecia (ortholog); autistic disorder (ortholog); DiGeorge syndrome (ortholog) 9 92067376 92080490 + 30032202 116910216 MODEL JAAIVD010000002;X97020;XM_032914103;XM_032914105;XM_032914106 XP_032769994;XP_032769996;XP_032769997 forkhead box protein N1 protein-coding 626140906 LOC116886493 uncharacterized LOC116886493 17 31222304 31223106 + 116886493 MODEL JAAIVD010000011;XM_032887998 XP_032743889 uncharacterized protein LOC116886493 protein-coding 626140912 LOC116886494 nucleophosmin-like 17 23195349 23196608 + 116886494 MODEL JAAIVD010000011;XR_004386108 pseudo 626140915 Tlk2 tousled like kinase 2 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); chromosome segregation (ortholog); DNA damage response (ortholog); ASSOCIATED WITH autistic disorder (ortholog); autosomal dominant intellectual developmental disorder 57 (ortholog); Developmental Disease (ortholog); FOUND IN intermediate filament (ortholog); nucleus (ortholog); perinuclear region of cytoplasm (ortholog) 9 73815873 73909263 - 22301074;30032202 116910485 MODEL JAAIVD010000002;XM_032914368;XM_032914369;XM_032914370;XM_032914371;XM_032914372;XM_032914373;XM_032914374 XP_032770259;XP_032770260;XP_032770261;XP_032770262;XP_032770263;XP_032770264;XP_032770265 serine/threonine-protein kinase tousled-like 2 protein-coding 626140955 Pstpip1 proline-serine-threonine phosphatase interacting protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH acne (ortholog); Behcet's disease (ortholog); Chediak-Higashi syndrome (ortholog); FOUND IN actomyosin contractile ring (ortholog); cleavage furrow (ortholog); cytosol (ortholog) 8 50015218 50054158 + 30032202 116907616 MODEL JAAIVD010000027;XM_032910671 XP_032766562 proline-serine-threonine phosphatase-interacting protein 1 protein-coding 626140974 Optc opticin INVOLVED IN collagen fibril organization (ortholog); negative regulation of angiogenesis (ortholog); FOUND IN extracellular matrix (ortholog) 10 1778950 1788686 + 22301074 116911268 MODEL JAAIVD010000005;XM_032915174 XP_032771065 protein-coding 626140985 LOC116907277 olfactory receptor 145-like 8 31727235 31728179 + 22301074;30032202 116907277 MODEL JAAIVD010000027;XM_032910229 XP_032766120 protein-coding 626140988 LOC116888225 normal mucosa of esophagus-specific gene 1 protein-like X 129505010 129505467 - 116888225 MODEL JAAIVD010000014;XM_032889514 XP_032745405 protein-coding 626140992 Ociad1 OCIA domain containing 1 INVOLVED IN regulation of stem cell differentiation (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN endosome (ortholog); mitochondrion (ortholog) 11 30098512 30115782 + 30032202 116912119 MODEL JAAIVD010000006;XM_032916023 XP_032771914 OCIA domain-containing protein 1 protein-coding 626141005 LOC116885912 elastin-like 16 19310861 19331497 + 30032202 116885912 MODEL JAAIVD010000004;XM_032887227 XP_032743118 protein-coding 626141020 Kcnj2 potassium inwardly rectifying channel subfamily J member 2 ENCODES a protein that exhibits identical protein binding (ortholog); inward rectifier potassium channel activity (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cardiac muscle cell action potential (ortholog); cardiac muscle cell action potential involved in contraction (ortholog); cellular response to mechanical stimulus (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH Andersen-Tawil syndrome (ortholog); Arsenic Poisoning (ortholog); atrial fibrillation (ortholog); FOUND IN dendrite (ortholog); dendritic spine (ortholog); glutamatergic synapse (ortholog) 9 78225598 78236467 - 22301074;30032202 116909701 MODEL JAAIVD010000002;XM_032913369 XP_032769260 inward rectifier potassium channel 2 protein-coding 626141026 LOC116911977 myelin-associated oligodendrocyte basic protein-like 11 41017107 41057272 - 116911977 MODEL JAAIVD010000006 pseudo 626141027 LOC116884796 uncharacterized LOC116884796 15 63665312 63665938 + 116884796 MODEL JAAIVD010000010;XR_004385896 ncrna 626141031 Hes5 hes family bHLH transcription factor 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN astrocyte differentiation (ortholog); brain development (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); diabetes mellitus (ortholog); nervous system disease (ortholog) 1 5758049 5759476 - 22301074;30032202 116886062 MODEL JAAIVD010000025;XM_032887373 XP_032743264 transcription factor HES-5 protein-coding 626141038 C2H9orf57 chromosome 2 C9orf57 homolog 2 21641089 21645954 + 116891029 MODEL JAAIVD010000001;XM_032891711 XP_032747602 uncharacterized protein C9orf57 homolog protein-coding 626141046 Nat14 N-acetyltransferase 14 (putative) 2 177506645 177508772 + 30032202 116892677 MODEL JAAIVD010000001;XM_032894513;XM_032894514;XM_032894515;XM_032894516;XM_032894517;XM_032894518 XP_032750404;XP_032750405;XP_032750406;XP_032750407;XP_032750408;XP_032750409 N-acetyltransferase 14 protein-coding 626141071 Sfxn4 sideroflexin 4 ASSOCIATED WITH combined oxidative phosphorylation deficiency 18 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 2 55294535 55316773 + 22301074;30032202 116891304 MODEL JAAIVD010000001;XM_032892213;XM_032892214 XP_032748104;XP_032748105 sideroflexin-4 protein-coding 626141092 LOC116894954 U1 spliceosomal RNA 2 176609482 176609652 + 116894954 MODEL JAAIVD010000001;XR_004387148 snrna 626141095 LOC116897775 ragulator complex protein LAMTOR2-like 4 2848596 2849115 - 30032202 116897775 MODEL JAAIVD010000003;XM_032899203 XP_032755094 protein-coding 626141100 Rnf44 ring finger protein 44 14 73021327 73035615 - 116883362 MODEL JAAIVD010000009;XM_032884439;XM_032884440;XM_032884441;XM_032884442;XM_032884444;XM_032884445;XM_032884446;XM_032884447;XM_032884448;XM_032884449;XM_032884450 XP_032740330;XP_032740331;XP_032740332;XP_032740333;XP_032740335;XP_032740336;XP_032740337;XP_032740338;XP_032740339;XP_032740340;XP_032740341 protein-coding 626141146 LOC116906292 E3 ubiquitin-protein ligase TRIM13-like 7 76304801 76306043 + 116906292 MODEL JAAIVD010000026 pseudo 626141147 Ndel1 nudE neurodevelopment protein 1 like 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); identical protein binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell migration (ortholog); central nervous system neuron axonogenesis (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); cell body (ortholog) 9 48420107 48458469 - 30032202 116908795 MODEL JAAIVD010000002;XM_032912190;XM_032912191;XM_032912192 XP_032768081;XP_032768082;XP_032768083 nuclear distribution protein nudE-like 1 protein-coding 626141168 Wdr83os WD repeat domain 83 opposite strand ENCODES a protein that exhibits protein folding chaperone (ortholog); INVOLVED IN multi-pass transmembrane protein insertion into ER membrane (ortholog); protein insertion into ER membrane (ortholog); ASSOCIATED WITH NEURODEVELOPMENTAL DISORDER WITH VARIABLE FAMILIAL HYPERCHOLANEMIA (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); multi-pass translocon complex (ortholog); protein folding chaperone complex (ortholog) 17 15210051 15211604 - 22301074;30032202 116886220 MODEL JAAIVD010000011;XM_032887612;XM_032887613 XP_032743503;XP_032743504 protein Asterix protein-coding 626141180 LOC116884670 40S ribosomal protein S9-like 15 75579099 75579667 - 116884670 MODEL JAAIVD010000010 pseudo 626141181 Eme2 essential meiotic structure-specific endonuclease subunit 2 ENCODES a protein that exhibits DNA endonuclease activity (ortholog); enzyme-substrate adaptor activity (ortholog); INVOLVED IN double-strand break repair (ortholog); replication fork processing (ortholog); resolution of mitotic recombination intermediates (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); nuclear replication fork (ortholog) 9 2173027 2175904 - 116909334 MODEL JAAIVD010000002;XM_032912876 XP_032768767 probable crossover junction endonuclease EME2 protein-coding 626141191 LOC116894092 olfactory receptor 52M1-like 2 103283583 103284527 - 22301074 116894092 MODEL JAAIVD010000001;XM_032895812 XP_032751703 protein-coding 626141194 Ndufa9 NADH:ubiquinone oxidoreductase subunit A9 ENCODES a protein that exhibits NADH dehydrogenase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN circadian rhythm (ortholog); response to glucose (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); nuclear type mitochondrial complex I deficiency 26 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrial membrane (ortholog) 6 21049534 21076044 + 30032202 116903239 MODEL JAAIVD010000024;XM_032905617;XM_032905618 XP_032761508;XP_032761509 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 9, mitochondrial protein-coding 626141213 Cytl1 cytokine like 1 INVOLVED IN cartilage homeostasis (ortholog); chondrocyte differentiation (ortholog); chondroitin sulfate proteoglycan biosynthetic process (ortholog) 11 67445335 67450363 - 30032202 116912338 MODEL JAAIVD010000006;XM_032916387 XP_032772278 cytokine-like protein 1 protein-coding 626141220 Pfkp phosphofructokinase, platelet ENCODES a protein that exhibits 6-phosphofructokinase activity (ortholog); ATP binding (ortholog); fructose-6-phosphate binding (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); fructose 1,6-bisphosphate metabolic process (ortholog); fructose 6-phosphate metabolic process (ortholog); PARTICIPATES IN glycolysis pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); syndromic microphthalmia 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 14 20518172 20580455 - 22301074;30032202 116883650 MODEL JAAIVD010000009;XM_032884844;XM_032884845 XP_032740735;XP_032740736 ATP-dependent 6-phosphofructokinase, platelet type protein-coding 626141251 LOC116900280 olfactory receptor 8J3-like 5 63480140 63481087 - 22301074;30032202 116900280 MODEL JAAIVD010000023;XM_032902033 XP_032757924 protein-coding 626141254 Acaa2 acetyl-CoA acyltransferase 2 ENCODES a protein that exhibits acetyl-CoA C-acetyltransferase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acetyl-CoA metabolic process (ortholog); cellular response to hypoxia (ortholog); fatty acid beta-oxidation (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyacyl-CoA dehydrogenase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); basal cell carcinoma (ortholog); osteoarthritis (ortholog); FOUND IN ciliary basal body (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 15 57190133 57217085 - 30032202 116884589 MODEL JAAIVD010000010;XM_032885732 XP_032741623 3-ketoacyl-CoA thiolase, mitochondrial protein-coding 626141268 C2H19orf33 chromosome 2 C19orf33 homolog ENCODES a protein that exhibits double-stranded DNA binding (ortholog); single-stranded DNA binding (ortholog); ASSOCIATED WITH Disease Progression (ortholog); pancreatic ductal carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 2 166697493 166698297 + 22301074 116893377 MODEL JAAIVD010000001;XM_032895177 XP_032751068 immortalization up-regulated protein protein-coding 626141274 LOC116893854 olfactory receptor 13A1-like 2 61401158 61402087 - 22301074 116893854 MODEL JAAIVD010000001;XM_032895573 XP_032751464 protein-coding 626141277 Pde10a phosphodiesterase 10A ENCODES a protein that exhibits 3',5'-cGMP-stimulated cyclic-nucleotide phosphodiesterase activity (ortholog); 3',5'-cyclic-nucleotide phosphodiesterase activity (ortholog); cAMP binding (ortholog); INVOLVED IN cAMP catabolic process (ortholog); cGMP catabolic process (ortholog); regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); genetic disease (ortholog); Infantile-Onset Limb and Orofacial Dyskinesia (ortholog); FOUND IN cytosol (ortholog); extrinsic component of postsynaptic density membrane (ortholog); glutamatergic synapse (ortholog) 2 187585321 187813742 + 22301074;30032202 116892814 MODEL JAAIVD010000001;XM_032894692;XM_032894693;XM_032894694;XM_032894695 XP_032750583;XP_032750584;XP_032750585;XP_032750586 cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A protein-coding 626141314 Znf3 zinc finger protein 3 ENCODES a protein that exhibits identical protein binding (ortholog) 16 15517125 15528284 - 30032202 116885700 MODEL JAAIVD010000004;XM_032887008 XP_032742899 protein-coding 626141323 Pfdn6 prefoldin subunit 6 ENCODES a protein that exhibits amyloid-beta binding (ortholog); protein-folding chaperone binding (ortholog); unfolded protein binding (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); negative regulation of amyloid fibril formation (ortholog); protein folding (ortholog); FOUND IN prefoldin complex (ortholog); RPAP3/R2TP/prefoldin-like complex (ortholog) 18 6946591 6948070 - 22301074;30032202 116887073 MODEL JAAIVD010000013;XM_032888578;XM_032888579 XP_032744469;XP_032744470 protein-coding 626141337 Ttc29 tetratricopeptide repeat domain 29 INVOLVED IN cilium movement (ortholog); cilium organization (ortholog); ASSOCIATED WITH spermatogenic failure 42 (ortholog); spermatogenic failure 5 (ortholog); FOUND IN sperm flagellum (ortholog) 17 21715700 21915682 - 22301074 116886400 MODEL JAAIVD010000011;XM_032887870 XP_032743761 tetratricopeptide repeat protein 29 protein-coding 626141354 Matn1 matrilin 1 INVOLVED IN chondrocyte differentiation (ortholog); growth plate cartilage chondrocyte morphogenesis (ortholog); regulation of bone mineralization (ortholog); FOUND IN extracellular matrix (ortholog) 1 27369583 27379700 - 22301074 116886873 MODEL JAAIVD010000025;XM_032888332;XM_032888339 XP_032744223;XP_032744230 cartilage matrix protein protein-coding 626141371 LOC116898182 heat shock transcription factor, Y-linked-like 4 131069841 131071245 - 22301074 116898182 MODEL JAAIVD010000003;XM_032899545 XP_032755436 protein-coding 626141376 C2H15orf40 chromosome 2 C15orf40 homolog FOUND IN mitochondrion (ortholog) 2 118486398 118491595 + 30032202 116891897 MODEL JAAIVD010000001;XM_032893312;XM_032893313 XP_032749203;XP_032749204 UPF0235 protein C15orf40 homolog protein-coding 626141389 Nlrp2 NLR family pyrin domain containing 2 ENCODES a protein that exhibits Pyrin domain binding (ortholog); INVOLVED IN negative regulation of non-canonical NF-kappaB signal transduction (ortholog); positive regulation of interleukin-1 beta production (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 18 (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 2 176909286 176945102 + 22301074;30032202 116893444 MODEL JAAIVD010000001;XM_032895211 XP_032751102 NACHT, LRR and PYD domains-containing protein 2 protein-coding 626141402 Vegfd vascular endothelial growth factor D ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN dopaminergic neuron differentiation (ortholog); fibroblast proliferation (ortholog); induction of positive chemotaxis (ortholog); PARTICIPATES IN vascular endothelial growth factor signaling pathway; ASSOCIATED WITH lymphangioleiomyomatosis (ortholog); Lymphatic Metastasis (ortholog); ovarian carcinoma (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) X 24950402 24979727 + 22301074;30032202 116889260 MODEL JAAIVD010000014;XM_032890407;XM_032890408 XP_032746298;XP_032746299 protein-coding 626141418 LOC116899779 U6 spliceosomal RNA 4 134399511 134399613 - 116899779 MODEL JAAIVD010000003;XR_004387789 snrna 626141421 Sult2b1 sulfotransferase family 2B member 1 ENCODES a protein that exhibits cholesterol binding (ortholog); nucleic acid binding (ortholog); small molecule binding (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate metabolic process (ortholog); cholesterol metabolic process (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN sulfite oxidase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive congenital ichthyosis 1 (ortholog); autosomal recessive congenital ichthyosis 14 (ortholog); FOUND IN cytosol (ortholog) 2 153763021 153791517 + 22301074;30032202 116892127 MODEL JAAIVD010000001;XM_032893614 XP_032749505 sulfotransferase 2B1 protein-coding 626141432 LOC116913709 olfactory receptor 11H6 12 72677653 72678639 - 22301074 116913709 MODEL JAAIVD010000007;XM_032918006 XP_032773897 protein-coding 626141435 Rasip1 Ras interacting protein 1 ENCODES a protein that exhibits GTPase binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); negative regulation of autophagy (ortholog); FOUND IN cell-cell junction (ortholog); protein-containing complex (ortholog) 2 153881960 153894238 - 22301074;30032202 116892136 MODEL JAAIVD010000001;XM_032893626 XP_032749517 ras-interacting protein 1 protein-coding 626141451 LOC116912956 small nucleolar RNA SNORA5 11 75550118 75550246 - 116912956 MODEL JAAIVD010000006;XR_004389523 snorna 626141454 Lrtm1 leucine rich repeat transmembrane protein 1 INVOLVED IN positive regulation of synapse assembly (ortholog) 13 4747090 4752932 + 22301074;30032202 116914907 MODEL JAAIVD010000008;XM_032919346 XP_032775237 leucine rich repeats and transmembrane domains 1;leucine-rich repeat and transmembrane domain-containing protein 1 protein-coding 626141459 LOC116883936 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 14 3489374 3489953 - 116883936 MODEL JAAIVD010000009 pseudo 626141460 LOC116898588 high mobility group protein B1-like 4 169797450 169800017 - 116898588 MODEL JAAIVD010000003 pseudo 626141461 LOC116886346 uncharacterized LOC116886346 17 26576248 26577667 - 116886346 MODEL JAAIVD010000011;XR_004386100 ncrna 626141465 Rnaseh2a ribonuclease H2 subunit A ENCODES a protein that exhibits RNA-DNA hybrid ribonuclease activity (ortholog); INVOLVED IN mismatch repair (ortholog); RNA catabolic process (ortholog); ASSOCIATED WITH Aicardi-Goutieres syndrome (ortholog); Aicardi-Goutieres Syndrome 4 (ortholog); genetic disease (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); ribonuclease H2 complex (ortholog) 17 15321482 15330927 + 22301074;30032202 116886038 MODEL JAAIVD010000011;XM_032887334;XM_032887336;XM_032887337;XM_032887338;XM_032887339;XM_032887340;XM_032887341 XP_032743225;XP_032743227;XP_032743228;XP_032743229;XP_032743230;XP_032743231;XP_032743232 protein-coding 626141496 Elovl1 ELOVL fatty acid elongase 1 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN ceramide biosynthetic process (ortholog); establishment of skin barrier (ortholog); fatty acid elongation, monounsaturated fatty acid (ortholog); ASSOCIATED WITH ICHTHYOTIC KERATODERMA, SPASTICITY, HYPOMYELINATION, AND DYSMORPHIC FACIAL FEATURES (ortholog); optic atrophy (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 38595544 38600131 - 22301074;30032202 116897800 MODEL JAAIVD010000025;XM_032899220;XM_032899224 XP_032755111;XP_032755115 elongation of very long chain fatty acids protein 1 protein-coding 626141511 Bpnt2 3'(2'), 5'-bisphosphate nucleotidase 2 ENCODES a protein that exhibits 3',5'-nucleotide bisphosphate phosphatase activity (ortholog); 3'-nucleotidase activity (ortholog); INVOLVED IN chondrocyte development (ortholog); chondroitin sulfate proteoglycan metabolic process (ortholog); embryonic digit morphogenesis (ortholog); ASSOCIATED WITH chondrodysplasia with joint dislocations gPAPP type (ortholog); osteochondrodysplasia (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nuclear body (ortholog) 1 137989253 138015762 + 22301074;30032202 116903639 MODEL JAAIVD010000025;XM_032906303 XP_032762194 Golgi-resident adenosine 3',5'-bisphosphate 3'-phosphatase protein-coding 626141520 LOC116904697 small nucleolar RNA SNORA48 6 125216746 125216888 - 116904697 MODEL JAAIVD010000024;XR_004388393 snorna 626141523 LOC116886993 single-minded homolog 1-like 18 49738301 49811992 - 22301074 116886993 MODEL JAAIVD010000013;XM_032888472 XP_032744363 protein-coding 626141532 KEG97_t03 tRNA-Leu MT 2663 2737 + 64988238 trna 626141533 Aim2 absent in melanoma 2 ENCODES a protein that exhibits cysteine-type endopeptidase activator activity (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); AIM2 inflammasome complex assembly (ortholog); brain development (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); multiple sclerosis (ortholog); FOUND IN AIM2 inflammasome complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 10 52465531 52489289 + 30032202 116911675 MODEL JAAIVD010000005;XM_032915629;XM_032915630 XP_032771520;XP_032771521 interferon-inducible protein AIM2 protein-coding 626141548 Mtmr4 myotubularin related protein 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN midbody abscission (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of endocytic recycling (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); malignant mesothelioma (ortholog); muscular atrophy (ortholog); FOUND IN early endosome membrane (ortholog); early phagosome membrane (ortholog); endosome membrane (ortholog) 9 83183568 83203722 - 22301074;30032202 116908492 MODEL JAAIVD010000002;XM_032911650 XP_032767541 myotubularin-related protein 4 protein-coding 626141570 LOC116883662 keratin, type II cytoskeletal 6A 1 261388417 261392295 + 22301074;30032202 116883662 MODEL JAAIVD010000025;XM_032884862 XP_032740753 protein-coding 626141581 LOC116893950 GTP-binding nuclear protein Ran-like 2 96625845 96626088 + 116893950 MODEL JAAIVD010000001 pseudo 626141582 Bltp2 bridge-like lipid transfer protein family member 2 ASSOCIATED WITH prostate cancer (ortholog) 9 92148383 92170724 - 116910483 MODEL JAAIVD010000002;XM_032914365 XP_032770256 Kiaa0100 protein KIAA0100 homolog protein-coding 626141611 Ndufa12 NADH:ubiquinone oxidoreductase subunit A12 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); Leigh disease (ortholog); nuclear type mitochondrial complex I deficiency 23 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 1 173358858 173378576 + 22301074;30032202 116908311 MODEL JAAIVD010000025;XM_032911598 XP_032767489 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 protein-coding 626141619 Rps6kc1 ribosomal protein S6 kinase C1 ASSOCIATED WITH Developmental Disabilities (ortholog); prostate cancer (ortholog); FOUND IN early endosome (ortholog); endosome (ortholog); lysosome (ortholog) 10 68855908 68997553 - 22301074;30032202 116911461 MODEL JAAIVD010000005;XM_032915431;XM_032915432;XM_032915433;XM_032915434;XM_032915435 XP_032771322;XP_032771323;XP_032771324;XP_032771325;XP_032771326 ribosomal protein S6 kinase delta-1 protein-coding 626141649 LOC116900173 60S ribosomal protein L31-like 5 31797742 31798123 + 116900173 MODEL JAAIVD010000023 pseudo 626141650 Cdc7 cell division cycle 7 ENCODES a protein that exhibits kinase activity (ortholog); protein kinase activity (ortholog); INVOLVED IN cell cycle phase transition (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of G2/M transition of mitotic cell cycle (ortholog); ASSOCIATED WITH genetic disease (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); intercellular bridge (ortholog); mitotic spindle (ortholog) 11 16724486 16744855 + 22301074;30032202 116912578 MODEL JAAIVD010000006;XM_032916693;XM_032916694;XR_004389470 XP_032772584;XP_032772585 cell division cycle 7-related protein kinase protein-coding 626141671 Trim27 tripartite motif containing 27 ENCODES a protein that exhibits identical protein binding (ortholog); phosphatidylinositol 3-kinase inhibitor activity (ortholog); SUMO transferase activity (ortholog); INVOLVED IN Arp2/3 complex-mediated actin nucleation (ortholog); innate immune response (ortholog); negative regulation of autophagy (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); fibrillar center (ortholog) 14 41365203 41377048 + 22301074;30032202 116883436 MODEL JAAIVD010000009;XM_032884575 XP_032740466 zinc finger protein RFP protein-coding 626141683 LOC116898275 olfactory receptor 12-like 4 164537401 164538360 + 22301074;30032202 116898275 MODEL JAAIVD010000003;XM_032899627 XP_032755518 protein-coding 626141686 LOC116901158 protein BANP-like 5 3653658 3654659 - 116901158 MODEL JAAIVD010000023 pseudo 626141687 LOC116901454 protein FAM104A-like 1 121901193 121910702 + 116901454 MODEL JAAIVD010000025;XM_032903431 XP_032759322 protein-coding 626141692 Ccdc120 coiled-coil domain containing 120 INVOLVED IN intracellular protein localization (ortholog); microtubule anchoring at centrosome (ortholog); ASSOCIATED WITH Dwarfism (ortholog); FOUND IN centriolar subdistal appendage (ortholog); centriole (ortholog) X 14389587 14399241 + 116888689 MODEL JAAIVD010000014;XM_032889980 XP_032745871 coiled-coil domain-containing protein 120 protein-coding 626141707 Abcc1 ATP binding cassette subfamily C member 1 (ABCC1 blood group) ENCODES a protein that exhibits ABC-type glutathione S-conjugate transporter activity (ortholog); ABC-type transporter activity (ortholog); ABC-type vitamin B12 transporter activity (ortholog); INVOLVED IN amygdala development (ortholog); amyloid-beta clearance (ortholog); amyloid-beta metabolic process (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; doxorubicin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); autosomal dominant nonsyndromic deafness (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 9 7758057 7879304 - 22301074;30032202 116909500 MODEL JAAIVD010000002;XM_032913103;XM_032913104;XM_032913105 XP_032768994;XP_032768995;XP_032768996 multidrug resistance-associated protein 1 protein-coding 626141746 Unc45b unc-45 myosin chaperone B ENCODES a protein that exhibits Hsp90 protein binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH cataract 43 (ortholog); Craniofacial Abnormalities (ortholog); dilated cardiomyopathy 1A (ortholog); FOUND IN cytosol (ortholog) 9 87576787 87603564 - 30032202 116908540 MODEL JAAIVD010000002;XM_032911739;XM_032911740;XM_032911741 XP_032767630;XP_032767631;XP_032767632 protein unc-45 homolog B protein-coding 626141771 LOC116898590 spindlin-2-like 4 175863386 175870400 + 22301074;30032202 116898590 MODEL JAAIVD010000003;XM_032899786 XP_032755677 protein-coding 626141777 Taf4 TATA-box binding protein associated factor 4 ENCODES a protein that exhibits aryl hydrocarbon receptor binding (ortholog); core promoter sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA-templated transcription (ortholog); DNA-templated transcription initiation (ortholog); mRNA transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 73 (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); male germ cell nucleus (ortholog) 5 157002912 157067825 - 22301074;30032202 116901097 MODEL JAAIVD010000023;XM_032902658 XP_032758549 transcription initiation factor TFIID subunit 4 protein-coding 626141797 LOC116897902 resistin-like alpha 4 33364311 33365641 + 22301074;30032202 116897902 MODEL JAAIVD010000003;XM_032899306 XP_032755197 protein-coding 626141802 LOC116899883 U1 spliceosomal RNA 4 88471269 88471419 + 116899883 MODEL JAAIVD010000003 pseudo 626141803 LOC116908126 60S ribosomal protein L39-like 8 2808627 2808910 - 116908126 MODEL JAAIVD010000027 pseudo 626141804 LOC116894496 optic atrophy 3 protein homolog 2 171362653 171363147 - 30032202 116894496 MODEL JAAIVD010000001;XM_032896205 XP_032752096 protein-coding 626141808 LOC116894442 major allergen I polypeptide chain 1-like 2 164702518 164703823 - 30032202 116894442 MODEL JAAIVD010000001;XM_032896144 XP_032752035 protein-coding 626141815 Polr2k RNA polymerase II, I and III subunit K INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; FOUND IN nucleus (ortholog); RNA polymerase I complex (ortholog); RNA polymerase II, core complex (ortholog) 1 209704342 209707735 + 22301074;30032202 116910559 MODEL JAAIVD010000025;XM_032914474;XM_032914481 XP_032770365;XP_032770372 DNA-directed RNA polymerases I, II, and III subunit RPABC4;RNA polymerase II subunit K protein-coding 626141826 Crispld2 cysteine rich secretory protein LCCL domain containing 2 ENCODES a protein that exhibits glycosaminoglycan binding (ortholog); heparin binding (ortholog); INVOLVED IN extracellular matrix organization (ortholog); face morphogenesis (ortholog); lung development (ortholog); ASSOCIATED WITH liver disease (ortholog); lung disease (ortholog); toxic encephalopathy (ortholog); FOUND IN extracellular matrix (ortholog); transport vesicle (ortholog) 17 39659056 39700114 + 22301074 116886507 MODEL JAAIVD010000011;XM_032888015 XP_032743906 cysteine-rich secretory protein LCCL domain-containing 2 protein-coding 626141843 Psmc3ip PSMC3 interacting protein ENCODES a protein that exhibits DNA binding domain binding (ortholog); identical protein binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN androgen receptor signaling pathway (ortholog); estrogen receptor signaling pathway (ortholog); homologous chromosome pairing at meiosis (ortholog); ASSOCIATED WITH 46 XX gonadal dysgenesis (ortholog); ovarian dysgenesis 3 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 9 60386587 60389722 - 30032202 116909324 MODEL JAAIVD010000002;XM_032912864;XM_032912865 XP_032768755;XP_032768756 homologous-pairing protein 2 homolog protein-coding 626141860 LOC116907258 methyl-CpG-binding domain protein 3-like 2B 8 14185844 14187449 - 116907258 MODEL JAAIVD010000027;XM_032910214 XP_032766105 protein-coding 626141864 LOC116886013 small Cajal body-specific RNA 20 16 18987215 18987347 + 116886013 MODEL JAAIVD010000004;XR_004386082 ncrna 626141867 Hexb hexosaminidase subunit beta ENCODES a protein that exhibits acetylglucosaminyltransferase activity (ortholog); beta-N-acetylglucosaminidase activity (ortholog); beta-N-acetylhexosaminidase activity (ortholog); INVOLVED IN astrocyte cell migration (ortholog); chondroitin sulfate proteoglycan catabolic process (ortholog); dermatan sulfate proteoglycan catabolic process (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); COVID-19 (ortholog); genetic disease (ortholog); FOUND IN acrosomal vesicle (ortholog); azurophil granule (ortholog); beta-N-acetylhexosaminidase complex (ortholog) 3 199427021 199447139 + 22301074;30032202 116897269 MODEL JAAIVD010000012;XM_032899002 XP_032754893 beta-hexosaminidase subunit beta protein-coding 626141885 LOC116883665 ubiquinol-cytochrome-c reductase complex assembly factor 2-like 14 71624865 71625329 + 22301074;30032202 116883665 MODEL JAAIVD010000009;XM_032884861 XP_032740752 protein-coding 626141890 LOC116911337 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 10-like 10 2023581 2024111 - 116911337 MODEL JAAIVD010000005 pseudo 626141891 LOC116888994 glyceraldehyde-3-phosphate dehydrogenase-like X 13149194 13149694 - 22301074;30032202 116888994 MODEL JAAIVD010000014;XM_032890210 XP_032746101 protein-coding 626141894 C5H15orf62 chromosome 5 C15orf62 homolog ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN mitochondrion (ortholog) 5 97352371 97354170 + 116901799 MODEL JAAIVD010000023;XM_032903957 XP_032759848 uncharacterized protein C15orf62 homolog, mitochondrial protein-coding 626141899 Tmem177 transmembrane protein 177 FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 10 12477038 12480549 - 116911545 MODEL JAAIVD010000005;XM_032915535 XP_032771426 protein-coding 626141905 Ptgr3 prostaglandin reductase 3 ENCODES a protein that exhibits 15-oxoprostaglandin 13-reductase [NAD(P)+] activity (ortholog); INVOLVED IN negative regulation of fat cell differentiation (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog) 15 48270956 48278452 - 22301074;30032202 116884550 MODEL JAAIVD010000010;XM_032885687 XP_032741578 Zadh2 zinc binding alcohol dehydrogenase domain containing 2 protein-coding 626141911 Rhbdl3 rhomboid like 3 9 90064388 90117736 - 22301074;30032202 116909672 MODEL JAAIVD010000002;XM_032913327 XP_032769218 rhomboid-related protein 3 protein-coding 626141924 Csnk1a1 casein kinase 1 alpha 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); peptide binding (ortholog); INVOLVED IN autophagosome assembly (ortholog); cell morphogenesis (ortholog); cellular response to nutrient (ortholog); PARTICIPATES IN dopamine signaling pathway; Hedgehog signaling pathway; p53 signaling pathway; ASSOCIATED WITH adult T-cell leukemia/lymphoma (ortholog); Alzheimer's disease (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN beta-catenin destruction complex (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 15 70359284 70392427 - 22301074;30032202 116884781 MODEL JAAIVD010000010;XM_032886011;XM_032886012;XM_032886013;XM_032886014;XM_032886015 XP_032741902;XP_032741903;XP_032741904;XP_032741905;XP_032741906 casein kinase I protein-coding 626141949 Rnf111 ring finger protein 111 ENCODES a protein that exhibits SMAD binding (ortholog); SUMO polymer binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN pattern specification process (ortholog); positive regulation of protein ubiquitination (ortholog); positive regulation of transforming growth factor beta receptor signaling pathway (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 8 64784731 64852730 - 30032202 116906543 MODEL JAAIVD010000027;XM_032909241;XM_032909242;XM_032909243;XM_032909244;XM_032909245;XM_032909246 XP_032765132;XP_032765133;XP_032765134;XP_032765135;XP_032765136;XP_032765137 E3 ubiquitin-protein ligase Arkadia protein-coding 626141981 LOC116894091 olfactory receptor 52D1-like 2 103273664 103274629 - 22301074 116894091 MODEL JAAIVD010000001;XM_032895811 XP_032751702 protein-coding 626141984 Gid8 GID complex subunit 8 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); INVOLVED IN positive regulation of canonical Wnt signaling pathway (ortholog); positive regulation of cell population proliferation (ortholog); FOUND IN cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 157812384 157818923 + 22301074;30032202 116902417 MODEL JAAIVD010000023;XM_032904947 XP_032760838 glucose-induced degradation protein 8 homolog protein-coding 626141993 LOC116889833 peptidyl-tRNA hydrolase 22301074;30032202 116889833 MODEL JAAIVD010001539;XM_032890668 XP_032746559 protein-coding 626141994 Ptprd protein tyrosine phosphatase receptor type D ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); signaling receptor binding (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); cellular response to platelet-derived growth factor stimulus (ortholog); heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); FOUND IN glutamatergic synapse (ortholog); hippocampal mossy fiber to CA3 synapse (ortholog); presynaptic membrane (ortholog) 1 77115187 77494381 + 22301074 116900761 MODEL JAAIVD010000025;XM_032902475;XM_032902482;XM_032902489;XM_032902496;XM_032902504;XM_032902511;XM_032902519;XM_032902523;XM_032902526;XM_032902528;XM_032902531;XM_032902536;XM_032902538;XM_032902541;XM_032902543;XM_032902547;XM_032902551;XM_032902554;XM_032902557;XM_032902563;XM_032902568;XM_032902570;XM_032902572;XM_032902574;XM_032902575;XM_032902576;XM_032902578;XM_032902582;XM_032902584;XM_032902590;XM_032902593;XM_032902595;XM_032902601;XM_032902604;XM_032902605;XM_032902606;XM_032902607;XM_032902609;XM_032902612;XM_032902614;XM_032902616;XM_032902618;XM_032902620;XM_032902626;XM_032902632 XP_032758366;XP_032758373;XP_032758380;XP_032758387;XP_032758395;XP_032758402;XP_032758410;XP_032758414;XP_032758417;XP_032758419;XP_032758422;XP_032758427;XP_032758429;XP_032758432;XP_032758434;XP_032758438;XP_032758442;XP_032758445;XP_032758448;XP_032758454;XP_032758459;XP_032758461;XP_032758463;XP_032758465;XP_032758466;XP_032758467;XP_032758469;XP_032758473;XP_032758475;XP_032758481;XP_032758484;XP_032758486;XP_032758492;XP_032758495;XP_032758496;XP_032758497;XP_032758498;XP_032758500;XP_032758503;XP_032758505;XP_032758507;XP_032758509;XP_032758511;XP_032758517;XP_032758523 receptor-type tyrosine-protein phosphatase delta protein-coding 626142087 LOC116904508 40S ribosomal protein S29 6 4356668 4356977 + 22301074;30032202 116904508 MODEL JAAIVD010000024;XM_032907298 XP_032763189 protein-coding 626142092 Cfap20 cilia and flagella associated protein 20 INVOLVED IN cilium assembly (ortholog); flagellated sperm motility (ortholog); positive regulation of cell motility (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cone-rod dystrophy (ortholog); FOUND IN axonemal B tubule inner sheath (ortholog); axonemal microtubule (ortholog); centriole (ortholog) 17 2270408 2284009 - 30032202 116886359 MODEL JAAIVD010000011;XM_032887820;XM_032887821 XP_032743711;XP_032743712 cilia- and flagella-associated protein 20 protein-coding 626142105 LOC116885591 60S acidic ribosomal protein P2-like 1 205529384 205542056 + 116885591 MODEL JAAIVD010000025 pseudo 626142106 Acyp1 acylphosphatase 1 PARTICIPATES IN Leigh disease pathway; primary hyperoxaluria type 2 pathway; pyruvate decarboxylase deficiency pathway 7 99380109 99392841 - 22301074;30032202 116905292 MODEL JAAIVD010000026;XM_032908157;XM_032908158;XM_032908159;XM_032908160 XP_032764048;XP_032764049;XP_032764050;XP_032764051 acylphosphatase-1 protein-coding 626142121 LOC116911485 glyceraldehyde-3-phosphate dehydrogenase-like 10 83403813 83404814 - 116911485 MODEL JAAIVD010000005 pseudo 626142122 LOC116886009 small nucleolar RNA SNORA17 16 265173 265264 - 116886009 MODEL JAAIVD010000004 pseudo 626142123 LOC116888657 importin subunit alpha-1-like X 110525125 110526811 + 116888657 MODEL JAAIVD010000014 pseudo 626142124 Zbed2 zinc finger BED-type containing 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of keratinocyte differentiation (ortholog) 4 30806166 30807066 + 116897722 MODEL JAAIVD010000003;XM_032899177 XP_032755068 zinc finger BED domain-containing protein 2 protein-coding 626142128 LOC116889923 olfactory receptor 6C6-like 1 160751195 160754848 - 22301074;30032202 116889923 MODEL JAAIVD010000025;XM_032890738 XP_032746629 protein-coding 626142133 Grpel2 GrpE like 2, mitochondrial ENCODES a protein that exhibits unfolded protein binding (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; FOUND IN mitochondrion (ortholog) 15 70229895 70241835 + 22301074;30032202 116884486 MODEL JAAIVD010000010;XM_032885605;XM_032885606 XP_032741496;XP_032741497 grpE protein homolog 2, mitochondrial protein-coding 626142144 LOC116888894 protein Spindly-like X 129781440 129783219 - 116888894 MODEL JAAIVD010000014 pseudo 626142145 LOC116894058 olfactory receptor 52R1-like 2 102794885 102795862 - 22301074 116894058 MODEL JAAIVD010000001;XM_032895780 XP_032751671 protein-coding 626142149 LOC116908803 60S ribosomal protein L26-like 1 186614552 186615233 + 116908803 MODEL JAAIVD010000025 pseudo 626142150 Vcam1 vascular cell adhesion molecule 1 ENCODES a protein that exhibits cell adhesion mediator activity (ortholog); cell adhesion molecule binding (ortholog); integrin binding (ortholog); INVOLVED IN amine metabolic process (ortholog); cardiac neuron differentiation (ortholog); cell adhesion (ortholog); PARTICIPATES IN eicosanoid signaling pathway; ASSOCIATED WITH Albuminuria (ortholog); Anaphylaxis (ortholog); anemia (ortholog); FOUND IN alpha9-beta1 integrin-vascular cell adhesion molecule-1 complex (ortholog); apical part of cell (ortholog); apical plasma membrane (ortholog) 3 43584021 43603273 + 22301074;30032202 116896336 MODEL JAAIVD010000012;XM_032897437 XP_032753328 vascular cell adhesion protein 1 protein-coding 626142163 Gapvd1 GTPase activating protein and VPS9 domains 1 ENCODES a protein that exhibits GTPase activating protein binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of protein transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 5 899027 973180 + 22301074;30032202 116901113 MODEL JAAIVD010000023;XM_032902681 XP_032758572 GTPase-activating protein and VPS9 domain-containing protein 1 protein-coding 626142193 LOC116893466 zinc finger and SCAN domain-containing protein 5B-like 2 179894944 179902679 - 30032202 116893466 MODEL JAAIVD010000001;XM_032895225 XP_032751116 protein-coding 626142199 LOC116883514 histone H3.1-like 14 41900788 41901683 + 22301074;30032202 116883514 MODEL JAAIVD010000009;XM_032884686 XP_032740577 protein-coding 626142204 LOC116884122 U6 spliceosomal RNA 14 64021814 64021916 - 116884122 MODEL JAAIVD010000009;XR_004385852 snrna 626142207 LOC116901737 uncharacterized LOC116901737 1 95915061 95932678 - 116901737 MODEL JAAIVD010000025;XR_004388015 ncrna 626142212 Fbxl8 F-box and leucine rich repeat protein 8 17 24994139 24996551 + 22301074;30032202 116886368 MODEL JAAIVD010000011;XM_032887831 XP_032743722 F-box/LRR-repeat protein 8 protein-coding 626142218 LOC116914153 U6atac minor spliceosomal RNA 12 9786941 9787066 + 116914153 MODEL JAAIVD010000007;XR_004389704 snrna 626142221 LOC116895005 small nucleolar RNA SNORA48 2 80795974 80796114 + 116895005 MODEL JAAIVD010000001;XR_004387193 snorna 626142224 Pnrc2 proline rich nuclear receptor coactivator 2 INVOLVED IN nuclear-transcribed mRNA catabolic process, nonsense-mediated decay (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 22353643 22356408 + 30032202 116894512 MODEL JAAIVD010000025;XM_032896217 XP_032752108 proline-rich nuclear receptor coactivator 2 protein-coding 626142231 LOC116892572 serine/threonine-protein phosphatase 5 2 172049995 172074414 + 22301074;30032202 116892572 MODEL JAAIVD010000001;XM_032894349;XM_032894351 XP_032750240;XP_032750242 protein-coding 626142252 Gdf6 growth differentiation factor 6 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); BMP signaling pathway (ortholog); cell migration involved in metanephros development (ortholog); ASSOCIATED WITH CAKUT (ortholog); cleft lip (ortholog); cleft palate (ortholog) 1 133671380 133687502 - 22301074;30032202 116889389 MODEL JAAIVD010000025;XM_032890494 XP_032746385 growth/differentiation factor 6 protein-coding 626142258 LOC116912990 small nucleolar RNA SNORA17 11 40189419 40189546 - 116912990 MODEL JAAIVD010000006;XR_004389553 snorna 626142261 Slc5a6 solute carrier family 5 member 6 ENCODES a protein that exhibits amide transmembrane transporter activity (ortholog); biotin transmembrane transporter activity (ortholog); iodide transmembrane transporter activity (ortholog); INVOLVED IN biotin import across plasma membrane (ortholog); biotin metabolic process (ortholog); biotin transport (ortholog); ASSOCIATED WITH genetic disease (ortholog); NEURODEGENERATION, INFANTILE-ONSET, BIOTIN-RESPONSIVE (ortholog); PERIPHERAL MOTOR NEUROPATHY, CHILDHOOD-ONSET, BIOTIN-RESPONSIVE (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 7 23028222 23040744 + 22301074;30032202 116905986 MODEL JAAIVD010000026;XM_032909011;XM_032909012;XM_032909013;XM_032909015;XM_032909016 XP_032764902;XP_032764903;XP_032764904;XP_032764906;XP_032764907 sodium-dependent multivitamin transporter protein-coding 626142294 Gpr50 G protein-coupled receptor 50 ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 13 533660 539140 - 22301074;30032202 116914720 MODEL JAAIVD010000008;XM_032919150 XP_032775041 melatonin-related receptor protein-coding 626142300 LOC116887926 proline-rich protein 36-like X 58816778 58818874 + 116887926 MODEL JAAIVD010000014;XM_032889390 XP_032745281 protein-coding 626142303 Tnfaip3 TNF alpha induced protein 3 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); identical protein binding (ortholog); K63-linked deubiquitinase activity (ortholog); INVOLVED IN B-1 B cell homeostasis (ortholog); cellular response to hydrogen peroxide (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH autoimmune disease (ortholog); breast cancer (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 2 217827167 217840707 + 22301074;30032202 116892985 MODEL JAAIVD010000001;XM_032894940;XM_032894941;XM_032894942;XM_032894943;XM_032894944 XP_032750831;XP_032750832;XP_032750833;XP_032750834;XP_032750835 tumor necrosis factor alpha-induced protein 3 protein-coding 626142327 Rbm47 RNA binding motif protein 47 ENCODES a protein that exhibits enzyme binding (ortholog); enzyme-substrate adaptor activity (ortholog); mRNA 3'-UTR binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA stabilization (ortholog); cytidine to uridine editing (ortholog); hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN apolipoprotein B mRNA editing enzyme complex (ortholog); cytoplasm (ortholog); nucleus (ortholog) 11 23114305 23191613 - 30032202 116912350 MODEL JAAIVD010000006;XM_032916401;XM_032916402;XM_032916404 XP_032772292;XP_032772293;XP_032772295 RNA-binding protein 47 protein-coding 626142343 LOC116884095 U2 spliceosomal RNA 14 34242491 34242678 - 116884095 MODEL JAAIVD010000009;XR_004385834 snrna 626142346 LOC116884012 threonylcarbamoyladenosine tRNA methylthiotransferase-like 14 48885762 48904181 - 22301074;30032202 116884012 MODEL JAAIVD010000009;XM_032885251;XR_004385810 XP_032741142 protein-coding 626142358 Nsmce3 NSE3 component of SMC5/6 complex ENCODES a protein that exhibits protein dimerization activity (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); cellular response to radiation (ortholog); cellular response to UV (ortholog); ASSOCIATED WITH Lung Damage, Immunodeficiency and Chromosome Breakage Syndrome (ortholog); FOUND IN Smc5-Smc6 complex (ortholog) 2 135583895 135585340 + 30032202 116892004 MODEL JAAIVD010000001;XM_032893464 XP_032749355 NSE3 homolog, SMC5-SMC6 complex component;non-structural maintenance of chromosomes element 3 homolog protein-coding 626142363 Actr5 actin related protein 5 INVOLVED IN chromatin remodeling (ortholog); double-strand break repair (ortholog); positive regulation of DNA repair (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; FOUND IN cytoplasm (ortholog); Ino80 complex (ortholog); nucleus (ortholog) 5 137969906 137983165 + 30032202 116902240 MODEL JAAIVD010000023;XM_032904657;XR_004388056 XP_032760548 actin-related protein 5 protein-coding 626142379 Snai3 snail family transcriptional repressor 3 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH perinatal necrotizing enterocolitis (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 17 42093452 42100053 - 30032202 116886515 MODEL JAAIVD010000011;XM_032888026 XP_032743917 zinc finger protein SNAI3 protein-coding 626142386 Kpna6 karyopherin subunit alpha 6 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); INVOLVED IN entry of viral genome into host nucleus through nuclear pore complex via importin (ortholog); maternal process involved in female pregnancy (ortholog); positive regulation of cytokine production involved in inflammatory response (ortholog); FOUND IN NLS-dependent protein nuclear import complex (ortholog) 1 28473626 28505870 + 22301074;30032202 116896048 MODEL JAAIVD010000025;XM_032897046 XP_032752937 importin subunit alpha-7 protein-coding 626142404 Ets2 ETS proto-oncogene 2, transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN ectodermal cell fate commitment (ortholog); mesoderm development (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH allergic contact dermatitis (ortholog); Breast Neoplasms (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 4 48918218 48935407 - 22301074;30032202 116898957 MODEL JAAIVD010000003;XM_032900374 XP_032756265 protein C-ets-2 protein-coding 626142418 LOC116902912 40S ribosomal protein S23-like 6 109090559 109091045 + 116902912 MODEL JAAIVD010000024 pseudo 626142419 LOC116883854 histone-lysine N-methyltransferase PRDM9-like 14 426616 434672 + 22301074;30032202 116883854 MODEL JAAIVD010000009;XM_032885121 XP_032741012 protein-coding 626142433 Rnf212b ring finger protein 212B ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN chiasma assembly (ortholog); homologous chromosome pairing at meiosis (ortholog); protein ubiquitination (ortholog); ASSOCIATED WITH Female Infertility (ortholog); FOUND IN synaptonemal complex (ortholog) 12 70143519 70188595 - 30032202 116913952 MODEL JAAIVD010000007;XM_032918217 XP_032774108 protein-coding 626142449 Boll boule RNA binding protein ENCODES a protein that exhibits identical protein binding (ortholog); translation activator activity (ortholog); INVOLVED IN meiotic cell cycle (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 4 129679703 129786159 - 22301074 116898179 MODEL JAAIVD010000003;XM_032899544 XP_032755435 boule homolog, RNA binding protein;protein boule-like protein-coding 626142462 LOC116889460 small nucleolar RNA SNORA62/SNORA6 family X 11495307 11495479 + 116889460 MODEL JAAIVD010000014;XR_004386416 snorna 626142465 Rps5 ribosomal protein S5 ENCODES a protein that exhibits mRNA binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN regulation of translational fidelity (ortholog); ribosomal small subunit biogenesis (ortholog); translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); ribonucleoprotein complex (ortholog) 2 174251112 174254584 - 1460027;22301074;30032202 116892631 MODEL JAAIVD010000001;X58465;XM_032894452 CAA41379;XP_032750343 40S ribosomal protein S5 protein-coding 626142474 Chpf2 chondroitin polymerizing factor 2 ASSOCIATED WITH genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog) 6 153785547 153791053 + 22301074;30032202 116904213 MODEL JAAIVD010000024;XM_032907144 XP_032763035 chondroitin sulfate glucuronyltransferase protein-coding 626142483 Lcor ligand dependent nuclear receptor corepressor ENCODES a protein that exhibits chromatin binding (ortholog); histone deacetylase binding (ortholog); histone methyltransferase binding (ortholog); INVOLVED IN cellular response to estradiol stimulus (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) 2 40591810 40695789 + 22301074 116891160 MODEL JAAIVD010000001;XM_032891954;XM_032891955;XM_032891956;XM_032891957;XM_032891958;XM_032891960;XM_032891961;XM_032891962 XP_032747845;XP_032747846;XP_032747847;XP_032747848;XP_032747849;XP_032747851;XP_032747852;XP_032747853 ligand-dependent corepressor protein-coding 626142516 LOC116893329 kallikrein-2-like 2 155331783 155333914 - 22301074 116893329 MODEL JAAIVD010000001;XM_032895146 XP_032751037 protein-coding 626142522 LOC116892589 voltage-dependent anion-selective channel protein 1-like 1 62729934 62731966 + 116892589 MODEL JAAIVD010000025 pseudo 626142523 LOC116894749 high mobility group protein B1-like 2 141829002 141829531 - 116894749 MODEL JAAIVD010000001 pseudo 626142524 Zswim3 zinc finger SWIM-type containing 3 5 153137116 153152133 - 22301074 116902346 MODEL JAAIVD010000023;XM_032904829 XP_032760720 zinc finger SWIM domain-containing protein 3 protein-coding 626142530 Itfg2 integrin alpha FG-GAP repeat containing 2 INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); germinal center B cell differentiation (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); KICSTOR complex (ortholog) 6 19278668 19291612 + 22301074;30032202 116903212 MODEL JAAIVD010000024;XM_032905586 XP_032761477 KICSTOR complex protein ITFG2 protein-coding 626142546 Frg1 FSHD region gene 1 ASSOCIATED WITH facioscapulohumeral muscular dystrophy 1 (ortholog); Pulmonary Atresia (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog) 13 46152359 46175649 + 30032202 116915066 MODEL JAAIVD010000008;XM_032919484 XP_032775375 protein FRG1 protein-coding 626142559 Echdc3 enoyl-CoA hydratase domain containing 3 ENCODES a protein that exhibits enoyl-CoA hydratase activity (ortholog); INVOLVED IN fatty acid metabolic process (ortholog); positive regulation of cellular response to insulin stimulus (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN mitochondrion (ortholog) 14 12514476 12538121 - 30032202 116883444 MODEL JAAIVD010000009;XM_032884589 XP_032740480 enoyl-CoA hydratase domain-containing protein 3, mitochondrial protein-coding 626142568 Capza3 capping actin protein of muscle Z-line subunit alpha 3 INVOLVED IN actin filament organization (ortholog); cytoplasm organization (ortholog); spermatid development (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN acrosomal vesicle (ortholog); cortical cytoskeleton (ortholog); membrane (ortholog) 6 9519501 9520707 - 22301074;30032202 116904524 MODEL JAAIVD010000024;XM_032907315 XP_032763206 F-actin-capping protein subunit alpha-3 protein-coding 626142573 LOC116887123 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4-like 1 37862764 37863152 + 116887123 MODEL JAAIVD010000025 pseudo 626142574 Slc40a1 solute carrier family 40 member 1 ENCODES a protein that exhibits ferrous iron transmembrane transporter activity (ortholog); identical protein binding (ortholog); iron ion transmembrane transporter activity (ortholog); INVOLVED IN endothelium development (ortholog); establishment of localization in cell (ortholog); intracellular iron ion homeostasis (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH aceruloplasminemia (ortholog); anemia (ortholog); autistic disorder (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 121772512 121790818 - 22301074;30032202 116899356 MODEL JAAIVD010000003;XM_032901063 XP_032756954 protein-coding 626142586 LOC116887493 40S ribosomal protein S2-like 18 9287772 9288641 + 116887493 MODEL JAAIVD010000013 pseudo 626142587 Polr2e RNA polymerase II, I and III subunit E INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription pathway; RNA polymerase III transcription pathway; ASSOCIATED WITH Dwarfism (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase I complex (ortholog) 1 154835613 154839266 + 22301074;30032202 116905428 MODEL JAAIVD010000025;XM_032908377;XM_032908379 XP_032764268;XP_032764270 DNA-directed RNA polymerases I, II, and III subunit RPABC1;RNA polymerase II subunit E protein-coding 626142603 Prpf3 pre-mRNA processing factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); retinitis pigmentosa (ortholog); FOUND IN Cajal body (ortholog); cytosol (ortholog); nuclear speck (ortholog) 3 61431820 61456518 + 30032202 116896534 MODEL JAAIVD010000012;XM_032897715;XM_032897716;XM_032897717;XM_032897718;XM_032897719;XR_004387343 XP_032753606;XP_032753607;XP_032753608;XP_032753609;XP_032753610 U4/U6 small nuclear ribonucleoprotein Prp3 protein-coding 626142640 LOC116903599 protein S100-A11-like 6 62416427 62423446 - 22301074;30032202 116903599 MODEL JAAIVD010000024;XM_032906241 XP_032762132 protein-coding 626142645 LOC116912083 macrophage migration inhibitory factor-like 11 98235303 98235629 - 116912083 MODEL JAAIVD010000006 pseudo 626142646 Lhfpl2 LHFPL tetraspan subfamily member 2 INVOLVED IN development of primary female sexual characteristics (ortholog); development of primary male sexual characteristics (ortholog); positive regulation of fertilization (ortholog); ASSOCIATED WITH COVID-19 (ortholog); IgA glomerulonephritis (ortholog) 3 202146446 202235898 - 30032202 116897287 MODEL JAAIVD010000012;XM_032899019;XM_032899020 XP_032754910;XP_032754911 LHFPL tetraspan subfamily member 2 protein protein-coding 626142656 LOC116883916 ras GTPase-activating protein-binding protein 1-like 14 4399614 4401096 - 116883916 MODEL JAAIVD010000009 pseudo 626142657 LOC116886623 zinc finger protein 791-like 17 15154594 15168141 + 30032202 116886623 MODEL JAAIVD010000011;XM_032888130 XP_032744021 protein-coding 626142664 Dlgap1 DLG associated protein 1 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein-containing complex binding (ortholog); structural constituent of postsynaptic density (ortholog); INVOLVED IN aggresome assembly (ortholog); modulation of chemical synaptic transmission (ortholog); protein localization to synapse (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog); postsynaptic density, intracellular component (ortholog) 4 179586763 180292149 + 22301074;30032202 116899706 MODEL JAAIVD010000003;XM_032901733;XM_032901735;XM_032901736;XM_032901737;XM_032901738;XM_032901739;XM_032901740;XM_032901741;XM_032901742;XM_032901743;XM_032901744;XM_032901745 XP_032757624;XP_032757626;XP_032757627;XP_032757628;XP_032757629;XP_032757630;XP_032757631;XP_032757632;XP_032757633;XP_032757634;XP_032757635;XP_032757636 disks large-associated protein 1 protein-coding 626142705 LOC116893969 L-lactate dehydrogenase A chain-like 2 99949325 99950299 + 116893969 MODEL JAAIVD010000001 pseudo 626142706 LOC116903087 E3 SUMO-protein ligase NSE2-like 6 4240185 4243180 - 116903087 MODEL JAAIVD010000024 pseudo 626142707 LOC116913192 protocadherin-15-like 12 65392114 65691932 + 22301074 116913192 MODEL JAAIVD010000007;XM_032917385 XP_032773276 protein-coding 626142731 LOC116909291 nucleoside diphosphate kinase A-like 9 90274819 90275300 - 116909291 MODEL JAAIVD010000002 pseudo 626142732 LOC116899996 heat shock cognate 71 kDa protein-like 5 119786252 119788244 - 116899996 MODEL JAAIVD010000023 pseudo 626142733 LOC116889638 Y-linked testis-specific protein 1-like 22301074;30032202 116889638 MODEL JAAIVD010000021;XM_032890547 XP_032746438 protein-coding 626142734 Gpr142 G protein-coupled receptor 142 FOUND IN cell junction (ortholog); cytosol (ortholog); plasma membrane (ortholog) 9 74513377 74517112 - 22301074 116910531 MODEL JAAIVD010000002;XM_032914435 XP_032770326 probable G-protein coupled receptor 142 protein-coding 626142741 LOC116891163 proto-oncogene FRAT1 2 40937473 40940113 + 30032202 116891163 MODEL JAAIVD010000001;XM_032891965 XP_032747856 protein-coding 626142746 LOC116897004 serine/arginine-rich splicing factor 10 3 134190745 134191785 + 22301074 116897004 MODEL JAAIVD010000012;XM_032898609 XP_032754500 protein-coding 626142751 LOC116906548 protein NPAT ENCODES a protein that exhibits transcription coactivator activity (ortholog); transcription corepressor activity (ortholog); INVOLVED IN cell cycle G1/S phase transition (ortholog); in utero embryonic development (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN Cajal body (ortholog); cytoplasm (ortholog); Gemini of Cajal bodies (ortholog) 8 47523843 47560474 + 22301074;30032202 116906548 MODEL JAAIVD010000027;XM_032909258;XM_032909259 XP_032765149;XP_032765150 protein-coding 626142777 Ddx24 DEAD-box helicase 24 PARTICIPATES IN ribosome biogenesis pathway; FOUND IN nucleolus (ortholog) 7 114704073 114721716 - 22301074;30032202 116905372 MODEL JAAIVD010000026;XM_032908309;XM_032908310 XP_032764200;XP_032764201 ATP-dependent RNA helicase DDX24 protein-coding 626142793 LOC116911874 U6 spliceosomal RNA 10 43868647 43868752 - 116911874 MODEL JAAIVD010000005;XR_004389388 snrna 626142796 LOC116902814 putative vomeronasal receptor-like protein 4 6 83968885 83969817 - 22301074;30032202 116902814 MODEL JAAIVD010000024;XM_032905146 XP_032761037 protein-coding 626142799 LOC116900948 oxysterol-binding protein 1-like 5 89937529 89942198 - 116900948 MODEL JAAIVD010000023 pseudo 626142800 Il11ra interleukin 11 receptor subunit alpha ENCODES a protein that exhibits interleukin-11 binding (ortholog); interleukin-11 receptor activity (ortholog); INVOLVED IN cell differentiation (ortholog); cytokine-mediated signaling pathway (ortholog); decidualization (ortholog); ASSOCIATED WITH Craniosynostosis and Dental Anomalies (ortholog); Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Heat Stroke (ortholog) 1 3784829 3794462 - 22301074 116891285 MODEL JAAIVD010000025;XM_032892194 XP_032748085 interleukin-11 receptor subunit alpha protein-coding 626142817 Glt1d1 glycosyltransferase 1 domain containing 1 FOUND IN cytosol (ortholog) 16 26233951 26306602 - 22301074 116885153 MODEL JAAIVD010000004;XM_032886359 XP_032742250 glycosyltransferase 1 domain-containing protein 1 protein-coding 626142833 Wasf2 WASP family member 2 ENCODES a protein that exhibits protein kinase A binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament-based movement (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN E-cadherin signaling pathway; platelet-derived growth factor signaling pathway; FOUND IN cell-cell junction (ortholog); early endosome (ortholog); lamellipodium (ortholog) 1 25051414 25115009 - 22301074;30032202 116895328 MODEL JAAIVD010000025;XM_032896639 XP_032752530 wiskott-Aldrich syndrome protein family member 2 protein-coding 626142846 Fstl5 follistatin like 5 ASSOCIATED WITH bipolar disorder (ortholog) 3 77178277 77764930 - 22301074;30032202 116895831 MODEL JAAIVD010000012;XM_032896952 XP_032752843 follistatin-related protein 5 protein-coding 626142861 LOC116906458 small nucleolar RNA SNORA17 7 52700807 52700928 + 116906458 MODEL JAAIVD010000026 pseudo 626142862 Ipo13 importin 13 ENCODES a protein that exhibits nuclear glucocorticoid receptor binding (ortholog); INVOLVED IN protein import into nucleus (ortholog) 1 39107378 39127437 + 22301074;30032202 116898009 MODEL JAAIVD010000025;XM_032899406;XR_004387634 XP_032755297 importin-13 protein-coding 626142889 LOC116883225 60S ribosomal protein L13-like 14 52554961 52555559 - 116883225 MODEL JAAIVD010000009 pseudo 626142890 Kcnh8 potassium voltage-gated channel subfamily H member 8 ENCODES a protein that exhibits delayed rectifier potassium channel activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); potassium ion transport (ortholog); response to aldosterone (ortholog); ASSOCIATED WITH progressive myoclonus epilepsy 4 (ortholog); retinal degeneration (ortholog); RETINAL DYSTROPHY WITH INNER RETINAL DYSFUNCTION AND GANGLION CELL ABNORMALITIES (ortholog); FOUND IN plasma membrane (ortholog) 4 89714961 90297190 + 22301074;30032202 116899224 MODEL JAAIVD010000003;XM_032900823 XP_032756714 protein-coding 626142910 LOC116905707 40S ribosomal protein S19-like 7 67975327 67976029 - 22301074;30032202 116905707 MODEL JAAIVD010000026;XM_032908681 XP_032764572 protein-coding 626142915 LOC116893116 vomeronasal type-1 receptor 2-like 2 70743985 70744968 - 22301074;30032202 116893116 MODEL JAAIVD010000001;XM_032895054 XP_032750945 protein-coding 626142918 Phf5a PHD finger protein 5A ENCODES a protein that exhibits RNA binding (ortholog); zinc ion binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); positive regulation of DNA-templated transcription (ortholog); stem cell differentiation (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN nuclear matrix (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 251602907 251609702 - 22301074;30032202 116914078 MODEL JAAIVD010000025;XM_032918387 XP_032774278 PHD finger-like domain-containing protein 5A protein-coding 626142926 Kctd6 potassium channel tetramerization domain containing 6 ENCODES a protein that exhibits ankyrin binding (ortholog); cullin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of smoothened signaling pathway (ortholog); ubiquitin-dependent protein catabolic process (ortholog) 12 78631420 78646108 + 22301074;30032202 116913596 MODEL JAAIVD010000007;XM_032917845;XM_032917846 XP_032773736;XP_032773737 BTB/POZ domain-containing protein KCTD6 protein-coding 626142936 Rxrg retinoid X receptor gamma ENCODES a protein that exhibits identical protein binding (ortholog); molecular condensate scaffold activity (ortholog); nuclear receptor activity (ortholog); INVOLVED IN cellular response to hormone stimulus (ortholog); heart development (ortholog); neuron differentiation (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH lung non-small cell carcinoma (ortholog); Myocardial Ischemia (ortholog); papillary thyroid carcinoma (ortholog) 10 46905306 46946978 + 22301074;30032202 116911501 MODEL JAAIVD010000005;XM_032915489 XP_032771380 retinoic acid receptor RXR-gamma protein-coding 626142950 Pkn3 protein kinase N3 INVOLVED IN epithelial cell migration (ortholog) 22301074 116889767 MODEL JAAIVD010000081;XM_032890627 XP_032746518 serine/threonine-protein kinase N3 protein-coding 626142951 Asap1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits GTPase activator activity (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of dendritic spine development (ortholog); positive regulation of membrane tubulation (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); pulmonary tuberculosis (ortholog); urinary bladder cancer (ortholog); FOUND IN cell projection membrane (ortholog); centriolar satellite (ortholog); cytosol (ortholog) 1 238308921 238591445 - 22301074;30032202 116912147 MODEL JAAIVD010000025;XM_032916064;XM_032916072 XP_032771955;XP_032771963 arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 1 protein-coding 626142989 LOC116910389 60S ribosomal protein L37a-like 9 92134931 92138761 - 22301074 116910389 MODEL JAAIVD010000002;XM_032914231 XP_032770122 protein-coding 626142994 Arf6 ARF GTPase 6 ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cellular response to nerve growth factor stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); endocytic recycling (ortholog); PARTICIPATES IN E-cadherin signaling pathway; phosphatidylinositol 3-kinase class I signaling pathway; FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasm (ortholog) 7 83039956 83043369 + 22301074;30032202 116905120 MODEL JAAIVD010000026;XM_032907859 XP_032763750 ADP ribosylation factor 6;ADP-ribosylation factor 6 protein-coding 626142999 LOC116906684 zinc finger protein 878-like 1 157331338 157365282 + 30032202 116906684 MODEL JAAIVD010000025;XM_032909479;XM_032909485;XM_032909493 XP_032765370;XP_032765376;XP_032765384 protein-coding 626143013 Mrps18b mitochondrial ribosomal protein S18B ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN cell junction (ortholog); mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 18 9120051 9126362 - 22301074;30032202 116887478 MODEL JAAIVD010000013;XM_032889095;XM_032889096;XM_032889097 XP_032744986;XP_032744987;XP_032744988 28S ribosomal protein S18b, mitochondrial protein-coding 626143028 LOC116902569 small nucleolar RNA SNORA17 5 10447176 10447307 + 116902569 MODEL JAAIVD010000023;XR_004388165 snorna 626143031 Bahd1 bromo adjacent homology domain containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN heterochromatin formation (ortholog); negative regulation of DNA-templated transcription (ortholog); FOUND IN chromatin silencing complex (ortholog); nucleoplasm (ortholog) 5 97075652 97102101 + 22301074 116901791 MODEL JAAIVD010000023;XM_032903939;XM_032903940;XM_032903942;XM_032903943;XM_032903944;XM_032903945 XP_032759830;XP_032759831;XP_032759833;XP_032759834;XP_032759835;XP_032759836 bromo adjacent homology domain-containing 1 protein protein-coding 626143057 LOC116904764 small nucleolar RNA SNORA17 6 110327127 110327283 - 116904764 MODEL JAAIVD010000024 pseudo 626143058 LOC116895236 basic proline-rich protein-like 3 23648344 23651855 + 116895236 MODEL JAAIVD010000012;XM_032896560 XP_032752451 protein-coding 626143064 LOC116886740 small nucleolar RNA SNORA17 17 48398784 48398904 - 116886740 MODEL JAAIVD010000011 pseudo 626143065 Tspan33 tetraspanin 33 ENCODES a protein that exhibits enzyme binding (ortholog); INVOLVED IN pore complex assembly (ortholog); protein localization to plasma membrane (ortholog); protein maturation (ortholog); FOUND IN cell surface (ortholog); plasma membrane (ortholog); pore complex (ortholog) 6 109840768 109863828 - 22301074;30032202 116904010 MODEL JAAIVD010000024;XM_032906825;XM_032906826 XP_032762716;XP_032762717 tetraspanin-33 protein-coding 626143081 Pan3 poly(A) specific ribonuclease subunit PAN3 ENCODES a protein that exhibits poly(A)-specific ribonuclease activity (ortholog); INVOLVED IN deadenylation-dependent decapping of nuclear-transcribed mRNA (ortholog); positive regulation of cytoplasmic mRNA processing body assembly (ortholog); protein targeting (ortholog); PARTICIPATES IN microRNA pathway; FOUND IN P-body (ortholog); PAN complex (ortholog) 16 6298342 6413677 - 22301074;30032202 116885378 MODEL JAAIVD010000004;XM_032886654;XM_032886655 XP_032742545;XP_032742546 PAN2-PAN3 deadenylation complex subunit PAN3 protein-coding 626143108 Ppfia3 PPFI scaffold protein A3 INVOLVED IN neurotransmitter secretion (ortholog); regulation of short-term neuronal synaptic plasticity (ortholog); synaptic vesicle docking (ortholog); ASSOCIATED WITH genetic disease (ortholog); Hao-Fountain Syndrome (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); epididymosome (ortholog) 2 154143160 154171069 + 22301074;30032202 116892158 MODEL JAAIVD010000001;XM_032893654 XP_032749545 PTPRF interacting protein alpha 3;liprin-alpha-3 protein-coding 626143142 LOC116904431 lipopolysaccharide-induced tumor necrosis factor-alpha factor homolog 6 116525516 116526074 + 116904431 MODEL JAAIVD010000024 pseudo 626143143 Nrip3 nuclear receptor interacting protein 3 2 91685679 91706731 + 22301074 116891670 MODEL JAAIVD010000001;XM_032892924;XM_032892925 XP_032748815;XP_032748816 nuclear receptor-interacting protein 3 protein-coding 626143159 LOC116910281 Y-box-binding protein 1-like 9 39821725 39823892 + 116910281 MODEL JAAIVD010000002 pseudo 626143160 Arhgap17 Rho GTPase activating protein 17 INVOLVED IN actin filament organization (ortholog); calcium-ion regulated exocytosis (ortholog); ASSOCIATED WITH acute myocardial infarction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 2 78497151 78586436 + 22301074;30032202 116891548 MODEL JAAIVD010000001;XM_032892705;XM_032892706;XM_032892708;XM_032892709;XM_032892710 XP_032748596;XP_032748597;XP_032748599;XP_032748600;XP_032748601 rho GTPase-activating protein 17 protein-coding 626143192 LOC116893268 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143713652 143714640 - 116893268 MODEL JAAIVD010000001 pseudo 626143193 LOC116885917 syncytin-A 16 19497423 19499279 + 30032202 116885917 MODEL JAAIVD010000004;XM_032887230 XP_032743121 protein-coding 626143196 Prr22 proline rich 22 4 88140917 88143119 + 116899196 MODEL JAAIVD010000003;XM_032900781 XP_032756672 proline-rich protein 22 protein-coding 626143203 Fbxl2 F-box and leucine rich repeat protein 2 ENCODES a protein that exhibits phosphatidylinositol 3-kinase regulatory subunit binding (ortholog); protein phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN negative regulation of NLRP3 inflammasome complex assembly (ortholog); protein monoubiquitination (ortholog); protein ubiquitination (ortholog); FOUND IN membrane (ortholog); SCF ubiquitin ligase complex (ortholog) 8 104842614 104891172 - 22301074;30032202 116907808 MODEL JAAIVD010000027;XM_032910987 XP_032766878 F-box/LRR-repeat protein 2 protein-coding 626143222 LOC116885426 cytochrome P450 2J2-like 1 58978563 59060841 - 116885426 MODEL JAAIVD010000025 pseudo 626143223 Ankrd16 ankyrin repeat domain 16 INVOLVED IN tRNA modification (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 14 17818369 17830562 + 22301074;30032202 116883683 MODEL JAAIVD010000009;XM_032884894;XM_032884895 XP_032740785;XP_032740786 ankyrin repeat domain-containing protein 16 protein-coding 626143237 LOC116891720 olfactory receptor 5AN1-like 2 12263575 12264510 - 116891720 MODEL JAAIVD010000001 pseudo 626143238 Sppl2a signal peptide peptidase like 2A ENCODES a protein that exhibits aspartic endopeptidase activity, intramembrane cleaving (ortholog); protein homodimerization activity (ortholog); INVOLVED IN membrane protein ectodomain proteolysis (ortholog); membrane protein intracellular domain proteolysis (ortholog); membrane protein proteolysis (ortholog); ASSOCIATED WITH immunodeficiency 86 (ortholog); FOUND IN cytoplasmic side of endoplasmic reticulum membrane (ortholog); Golgi-associated vesicle membrane (ortholog); late endosome (ortholog) 5 105728393 105772254 - 22301074;30032202 116901922 MODEL JAAIVD010000023;XM_032904144;XM_032904145 XP_032760035;XP_032760036 signal peptide peptidase-like 2A protein-coding 626143261 LOC116894560 vomeronasal type-2 receptor 116-like 2 178378410 178393105 + 22301074;30032202 116894560 MODEL JAAIVD010000001;XM_032896271;XM_032896272;XM_032896273 XP_032752162;XP_032752163;XP_032752164 protein-coding 626143274 Ccdc122 coiled-coil domain containing 122 ASSOCIATED WITH leprosy (ortholog) 12 47302405 47358754 - 116913830 MODEL JAAIVD010000007;XM_032918142 XP_032774033 coiled-coil domain-containing protein 122 protein-coding 626143284 LOC116914768 60S ribosomal protein L7-like 13 11335903 11336811 + 116914768 MODEL JAAIVD010000008 pseudo 626143285 LOC116900370 olfactory receptor 10AG1-like 5 69449075 69450022 + 22301074 116900370 MODEL JAAIVD010000023;XM_032902119 XP_032758010 protein-coding 626143289 Fscn3 fascin actin-bundling protein 3 ASSOCIATED WITH hypospadias (ortholog); FOUND IN cytoplasm (ortholog) 6 111100942 111111011 - 22301074;30032202 116904026 MODEL JAAIVD010000024;XM_032906856 XP_032762747 fascin-3 protein-coding 626143300 LOC116913665 olfactory receptor 1537-like 12 302651 303595 - 22301074;30032202 116913665 MODEL JAAIVD010000007;XM_032917953 XP_032773844 protein-coding 626143303 Arhgap36 Rho GTPase activating protein 36 X 112672542 112679444 + 22301074 116888496 MODEL JAAIVD010000014;XM_032889779 XP_032745670 rho GTPase-activating protein 36 protein-coding 626143319 Phkg1 phosphorylase kinase catalytic subunit gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); phosphorylase kinase activity (ortholog); INVOLVED IN glycogen metabolic process (ortholog); protein phosphorylation (ortholog); PARTICIPATES IN glycogen degradation pathway; FOUND IN phosphorylase kinase complex (ortholog) 16 24140492 24154725 + 22301074 116885786 MODEL JAAIVD010000004;XM_032887117 XP_032743008 phosphorylase b kinase gamma catalytic chain, skeletal muscle/heart isoform protein-coding 626143333 LOC116895160 NHP2-like protein 1 3 9094393 9094804 - 116895160 MODEL JAAIVD010000012 pseudo 626143334 Aasdhppt aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase ENCODES a protein that exhibits holo-[acyl-carrier-protein] synthase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN 10-formyltetrahydrofolate catabolic process (ortholog); protein maturation (ortholog); FOUND IN cytosol (ortholog) 4 124534290 124535212 + 22301074;30032202 116898169 MODEL JAAIVD010000003;XM_032899541 XP_032755432 L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase protein-coding 626143337 Kpna1 karyopherin subunit alpha 1 ENCODES a protein that exhibits nuclear import signal receptor activity (ortholog); nuclear localization sequence binding (ortholog); INVOLVED IN NLS-bearing protein import into nucleus (ortholog); postsynapse to nucleus signaling pathway (ortholog); regulation of apoptotic process (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase-Akt signaling pathway; ASSOCIATED WITH schizophrenia (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 4 20755582 21012701 + 22301074;30032202 116898815 MODEL JAAIVD010000003;XM_032900169 XP_032756060 importin subunit alpha-5 protein-coding 626143355 Adgrg1 adhesion G protein-coupled receptor G1 ENCODES a protein that exhibits collagen binding (ortholog); extracellular matrix binding (ortholog); G protein-coupled receptor activity (ortholog); INVOLVED IN angiogenesis (ortholog); brain development (ortholog); cell adhesion (ortholog); ASSOCIATED WITH bilateral frontoparietal polymicrogyria (ortholog); bilateral perisylvian polymicrogyria (ortholog); Familial Prostate Cancer (ortholog); FOUND IN glial limiting end-foot (ortholog); plasma membrane (ortholog) 17 1853886 1890792 + 22301074;30032202 116886236 MODEL JAAIVD010000011;XM_032887641 XP_032743532 adhesion G-protein coupled receptor G1 protein-coding 626143374 Catspere catsper channel auxiliary subunit epsilon FOUND IN sperm principal piece (ortholog) 10 56419436 56536747 + 22301074;30032202 116910925 MODEL JAAIVD010000005;XM_032914676 XP_032770567 cation channel sperm-associated protein subunit epsilon protein-coding 626143395 LOC116889843 40S ribosomal protein S2-like 116889843 MODEL JAAIVD010001898 pseudo 626143396 LOC116899746 U6 spliceosomal RNA 4 77904106 77904209 - 116899746 MODEL JAAIVD010000003;XR_004387761 snrna 626143399 LOC116906676 histone lysine demethylase PHF8-like 1 157596041 157599520 - 30032202 116906676 MODEL JAAIVD010000025;XM_032909466 XP_032765357 protein-coding 626143404 LOC116914783 uncharacterized LOC116914783 13 53226432 53232878 + 116914783 MODEL JAAIVD010000008;XR_004389769 ncrna 626143408 Nkg7 natural killer cell granule protein 7 INVOLVED IN CD4-positive, alpha-beta T cell activation (ortholog); defense response to protozoan (ortholog); granzyme-mediated programmed cell death signaling pathway (ortholog); FOUND IN cytolytic granule (ortholog); cytolytic granule membrane (ortholog); plasma membrane (ortholog) 2 156039907 156041046 - 30032202 116894367 MODEL JAAIVD010000001;XM_032896071 XP_032751962 protein NKG7 protein-coding 626143416 LOC116895777 uncharacterized LOC116895777 3 50172617 50174040 - 116895777 MODEL JAAIVD010000012 pseudo 626143417 Khsrp KH-type splicing regulatory protein ENCODES a protein that exhibits mRNA 3'-UTR AU-rich region binding (ortholog); mRNA 3'-UTR binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); cellular response to cytokine stimulus (ortholog); miRNA metabolic process (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); FOUND IN cytoplasmic stress granule (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 4 88402488 88412204 - 22301074;30032202 116899208 MODEL JAAIVD010000003;XM_032900797;XM_032900799 XP_032756688;XP_032756690 far upstream element-binding protein 2 protein-coding 626143442 Ccdc138 coiled-coil domain containing 138 18 24655226 24737343 + 116886909 MODEL JAAIVD010000013;XM_032888375 XP_032744266 coiled-coil domain-containing protein 138 protein-coding 626143462 LOC116912397 uncharacterized LOC116912397 11 17327096 17328168 - 116912397 MODEL JAAIVD010000006;XR_004389455 ncrna 626143467 Col9a2 collagen type IX alpha 2 chain ENCODES a protein that exhibits protein homodimerization activity (ortholog); PARTICIPATES IN syndecan signaling pathway; ASSOCIATED WITH connective tissue disease (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN collagen type IX trimer (ortholog) 1 35957437 35973538 - 116897224 MODEL JAAIVD010000025;XM_032898947 XP_032754838 collagen alpha-2(IX) chain protein-coding 626143503 LOC116890295 U2 spliceosomal RNA 1 47600698 47600773 - 116890295 MODEL JAAIVD010000025 pseudo 626143504 Ube2l3 ubiquitin conjugating enzyme E2 L3 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin conjugating enzyme activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cell cycle phase transition (ortholog); cell population proliferation (ortholog); cellular response to glucocorticoid stimulus (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH Chronic Hepatitis B (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); presynapse (ortholog) 4 2436946 2475581 - 116898631 MODEL JAAIVD010000003;XM_032899849 XP_032755740 ubiquitin-conjugating enzyme E2 L3 protein-coding 626143512 LOC116908342 U7 small nuclear RNA 8 9060848 9060906 + 116908342 MODEL JAAIVD010000027;XR_004388893 snrna 626143515 LOC116900457 olfactory receptor 4C15-like 5 71143592 71144557 - 22301074 116900457 MODEL JAAIVD010000023;XM_032902198 XP_032758089 protein-coding 626143519 LOC116890514 small nucleolar RNA SNORA48 1 6582970 6583111 - 116890514 MODEL JAAIVD010000025;XR_004386696 snorna 626143522 LOC116911064 serine/arginine-rich splicing factor 6-like 10 36508053 36509174 - 116911064 MODEL JAAIVD010000005 pseudo 626143523 Tex13b testis expressed 13B X 93212919 93220152 - 116888086 MODEL JAAIVD010000014;XM_032889456 XP_032745347 testis-expressed protein 13B protein-coding 626143530 LOC116895154 voltage-dependent anion-selective channel protein 3-like 3 4013367 4014260 + 116895154 MODEL JAAIVD010000012 pseudo 626143531 Atg5 autophagy related 5 ENCODES a protein that exhibits Atg8-family ligase activity (ortholog); INVOLVED IN aggrephagy (ortholog); antigen processing and presentation of endogenous antigen (ortholog); autophagosome assembly (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); anemia (ortholog); autosomal recessive spinocerebellar ataxia 25 (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); axon (ortholog) 18 44036590 44132959 + 30032202 116887025 MODEL JAAIVD010000013;XM_032888518;XM_032888519 XP_032744409;XP_032744410 autophagy protein 5 protein-coding 626143546 LOC116914100 small nucleolar RNA SNORA31 12 48567742 48567871 - 116914100 MODEL JAAIVD010000007;XR_004389668 snorna 626143549 Zfp36l1 ZFP36 ring finger protein like 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); mRNA 3'-UTR AU-rich region binding (ortholog); mRNA binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); apoptotic process (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 7 94191663 94196965 - 22301074;30032202 116905209 MODEL JAAIVD010000026;XM_032908022 XP_032763913 mRNA decay activator protein ZFP36L1 protein-coding 626143555 Irf5 interferon regulatory factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); cellular response to peptidoglycan (ortholog); cellular response to virus (ortholog); ASSOCIATED WITH arthritis (ortholog); COVID-19 (ortholog); Electric Burns (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 110028144 110038781 - 22301074;30032202 116904012 MODEL JAAIVD010000024;XM_032906830;XM_032906831;XM_032906832;XR_004388326 XP_032762721;XP_032762722;XP_032762723 protein-coding 626143577 Bak1 BCL2 antagonist/killer 1 ENCODES a protein that exhibits BH domain binding (ortholog); heat shock protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); apoptotic process (ortholog); apoptotic process involved in blood vessel morphogenesis (ortholog); PARTICIPATES IN intrinsic apoptotic pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); ataxia telangiectasia (ortholog); FOUND IN BAK complex (ortholog); Bcl-2 family protein complex (ortholog); cytoplasm (ortholog) 18 6780175 6788702 + 22301074;30032202 116887151 MODEL JAAIVD010000013;XM_032888698;XM_032888699;XM_032888700 XP_032744589;XP_032744590;XP_032744591 bcl-2 homologous antagonist/killer protein-coding 626143595 LOC116897796 olfactory receptor 2AJ1-like 4 4536026 4536965 - 22301074 116897796 MODEL JAAIVD010000003;XM_032899216 XP_032755107 protein-coding 626143598 LOC116883977 probable ATP-dependent RNA helicase DDX5 14 27868876 27870535 + 116883977 MODEL JAAIVD010000009 pseudo 626143599 LOC116909331 olfactory receptor 1361-like 9 25775267 25776199 + 22301074;30032202 116909331 MODEL JAAIVD010000002;XM_032912872 XP_032768763 protein-coding 626143602 Rtf2 replication termination factor 2 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cellular response to hydroxyurea (ortholog); regulation of DNA stability (ortholog); FOUND IN replication fork (ortholog) 5 145531586 145560726 - 30032202 116902285 MODEL JAAIVD010000023;XM_032904716 XP_032760607 protein-coding 626143615 LOC116906740 zinc finger protein 14-like 1 157483187 157491677 + 30032202 116906740 MODEL JAAIVD010000025;XM_032909565 XP_032765456 protein-coding 626143623 LOC116908419 small nucleolar RNA SNORA17 8 20363268 20363388 + 116908419 MODEL JAAIVD010000027 pseudo 626143624 LOC116904440 uncharacterized LOC116904440 6 121908698 121930854 + 116904440 MODEL JAAIVD010000024 pseudo 626143625 Mtrf1 mitochondrial translation release factor 1 ENCODES a protein that exhibits translation release factor activity, codon specific (ortholog); INVOLVED IN mitochondrial translational termination (ortholog); FOUND IN mitochondrion (ortholog) 12 44929460 44956578 - 22301074 116913580 MODEL JAAIVD010000007;XM_032917801 XP_032773692 peptide chain release factor 1, mitochondrial protein-coding 626143640 Tmem184a transmembrane protein 184A INVOLVED IN germ-line sex determination (ortholog); regulation of protein localization (ortholog); regulation of secretion (ortholog); FOUND IN early endosome membrane (ortholog); endosome (ortholog); plasma membrane (ortholog) 16 13372910 13388780 + 30032202 116885310 MODEL JAAIVD010000004;XM_032886570;XM_032886571;XM_032886572 XP_032742461;XP_032742462;XP_032742463 protein-coding 626143662 LOC116908169 high mobility group protein B3-like 8 46288521 46291999 - 116908169 MODEL JAAIVD010000027 pseudo 626143663 Ptprk protein tyrosine phosphatase receptor type K ENCODES a protein that exhibits beta-catenin binding (ortholog); gamma-catenin binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell adhesion (ortholog); cell migration (ortholog); cellular response to reactive oxygen species (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); melanoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cell surface (ortholog) 2 214173772 214669401 + 22301074 116892965 MODEL JAAIVD010000001;XM_032894914;XM_032894915;XM_032894916;XM_032894917;XM_032894918;XM_032894919 XP_032750805;XP_032750806;XP_032750807;XP_032750808;XP_032750809;XP_032750810 receptor-type tyrosine-protein phosphatase kappa protein-coding 626143707 Gstm3 glutathione S-transferase mu 3 ENCODES a protein that exhibits enzyme binding (ortholog); glutathione binding (ortholog); glutathione transferase activity (ortholog); INVOLVED IN cellular detoxification of nitrogen compound (ortholog); glutathione metabolic process (ortholog); nitrobenzene metabolic process (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); asthma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); sperm fibrous sheath (ortholog) 3 50366353 50369396 - 22301074;30032202 116896380 MODEL JAAIVD010000012;XM_032897503 XP_032753394 protein-coding 626143719 LOC116913051 U6 spliceosomal RNA 11 71152878 71152981 + 116913051 MODEL JAAIVD010000006;XR_004389586 snrna 626143722 Rgs11 regulator of G protein signaling 11 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); ASSOCIATED WITH morphine dependence (ortholog); FOUND IN cell tip (ortholog); dendrite (ortholog); dendrite terminus (ortholog) 9 3463136 3470779 + 22301074;30032202 116910560 MODEL JAAIVD010000002;XM_032914472 XP_032770363 regulator of G-protein signaling 11 protein-coding 626143743 Tril TLR4 interactor with leucine rich repeats ENCODES a protein that exhibits lipopolysaccharide binding (ortholog); INVOLVED IN regulation of cytokine production involved in immune response (ortholog); toll-like receptor 4 signaling pathway (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); FOUND IN lipopolysaccharide receptor complex (ortholog) 6 87259527 87264823 + 22301074 116903777 MODEL JAAIVD010000024;XM_032906468 XP_032762359 protein-coding 626143748 S100pbp S100P binding protein ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleus (ortholog) 1 28952425 28993080 + 22301074;30032202 116896232 MODEL JAAIVD010000025;XM_032897298;XM_032897307;XM_032897314;XM_032897321;XM_032897329;XM_032897335;XM_032897343 XP_032753189;XP_032753198;XP_032753205;XP_032753212;XP_032753220;XP_032753226;XP_032753234 S100P-binding protein protein-coding 626143780 LOC116906478 U1 spliceosomal RNA 7 67615917 67616075 + 116906478 MODEL JAAIVD010000026;XR_004388724 snrna 626143783 LOC116889310 small nuclear ribonucleoprotein G-like X 125744672 125744890 + 116889310 MODEL JAAIVD010000014 pseudo 626143784 Adamtsl5 ADAMTS like 5 ENCODES a protein that exhibits heparin binding (ortholog); microfibril binding (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); microfibril (ortholog) 1 154534136 154541344 + 22301074;30032202 116905143 MODEL JAAIVD010000025;XM_032907912 XP_032763803 ADAMTS-like protein 5 protein-coding 626143802 LOC116902086 zinc finger protein 120-like 5 129998681 130093572 + 30032202 116902086 MODEL JAAIVD010000023;XM_032904386;XM_032904387;XR_004388041 XP_032760277;XP_032760278 protein-coding 626143815 LOC116910361 uncharacterized LOC116910361 9 74097737 74117681 - 116910361 MODEL JAAIVD010000002;XM_032914213 XP_032770104 uncharacterized protein LOC116910361 protein-coding 626143827 Nme8 NME/NM23 family member 8 ENCODES a protein that exhibits 3'-5'-DNA exonuclease activity (ortholog); microtubule binding (ortholog); INVOLVED IN cellular response to reactive oxygen species (ortholog); cilium assembly (ortholog); DNA catabolic process (ortholog); ASSOCIATED WITH primary ciliary dyskinesia (ortholog); primary ciliary dyskinesia 6 (ortholog); FOUND IN axoneme (ortholog); cytoplasm (ortholog); cytosol (ortholog) 14 38387841 38450617 - 116883852 MODEL JAAIVD010000009;XM_032885116 XP_032741007 thioredoxin domain-containing protein 3 protein-coding 626143844 Mrgpre MAS related GPR family member E ENCODES a protein that exhibits G protein-coupled bile acid receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled bile acid receptor signaling pathway (ortholog); positive regulation of insulin secretion involved in cellular response to glucose stimulus (ortholog); FOUND IN plasma membrane (ortholog) 2 5924646 5928259 + 22301074;30032202 116890828 MODEL JAAIVD010000001;XM_032891342;XM_032891343;XM_032891344;XM_032891345 XP_032747233;XP_032747234;XP_032747235;XP_032747236 mas-related G-protein coupled receptor member E protein-coding 626143857 Ccdc152 coiled-coil domain containing 152 ASSOCIATED WITH basal cell carcinoma (ortholog) 3 176726095 176747733 + 116897162 MODEL JAAIVD010000012;XM_032898834 XP_032754725 coiled-coil domain-containing protein 152 protein-coding 626143869 LOC116912720 60S ribosomal protein L8-like 11 3832803 3833529 + 116912720 MODEL JAAIVD010000006 pseudo 626143870 LOC116906413 small nucleolar RNA SNORD53/SNORD92 7 21574760 21574837 - 116906413 MODEL JAAIVD010000026;XR_004388675 snorna 626143873 Tent5b terminal nucleotidyltransferase 5B ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); negative regulation of cell cycle (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 24753066 24760157 - 22301074;30032202 116895209 MODEL JAAIVD010000025;XM_032896545 XP_032752436 protein-coding 626143879 Naa30 N-alpha-acetyltransferase 30, NatC catalytic subunit ENCODES a protein that exhibits protein-N-terminal amino-acid acetyltransferase activity (ortholog); INVOLVED IN proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); protein stabilization (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); NatC complex (ortholog) 12 73865820 73884302 - 30032202 116913329 MODEL JAAIVD010000007;XM_032917474;XM_032917475 XP_032773365;XP_032773366 N-alpha-acetyltransferase 30 protein-coding 626143891 Anxa4 annexin A4 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN epithelial cell differentiation (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); negative regulation of interleukin-8 production (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); nuclear membrane (ortholog) 6 59534699 59574422 + 22301074;30032202 116903545 MODEL JAAIVD010000024;XM_032906158 XP_032762049 protein-coding 626143908 LOC116912870 DNA polymerase epsilon subunit 3-like 11 156828 157355 - 116912870 MODEL JAAIVD010000006 pseudo 626143909 Dynlt1 dynein light chain Tctex-type 1 ENCODES a protein that exhibits G-protein beta-subunit binding (ortholog); GTP-dependent protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN axon development (ortholog); cardiac muscle cell apoptotic process (ortholog); dendrite development (ortholog); PARTICIPATES IN mitochondria transport pathway; FOUND IN axonal growth cone (ortholog); cytoplasmic dynein complex (ortholog); cytoplasmic microtubule (ortholog) 2 192495030 192501999 + 30032202 116892849 MODEL JAAIVD010000001;XM_032894739;XM_032894740 XP_032750630;XP_032750631 protein-coding 626143923 Irak1bp1 interleukin 1 receptor associated kinase 1 binding protein 1 ENCODES a protein that exhibits signaling adaptor activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH DEVELOPMENTAL DELAY, INTELLECTUAL DISABILITY, OBESITY, AND DYSMORPHIC FEATURES (ortholog); Sjogren's syndrome (ortholog) 8 77004613 77023263 + 30032202 116907177 MODEL JAAIVD010000027;XM_032910136 XP_032766027 interleukin-1 receptor-associated kinase 1-binding protein 1 protein-coding 626143931 Fam174a family with sequence similarity 174 member A 4 166411227 166431235 - 116899681 MODEL JAAIVD010000003;XM_032901700;XM_032901701 XP_032757591;XP_032757592 membrane protein FAM174A protein-coding 626143942 Clip1 CAP-Gly domain containing linker protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); microtubule plus-end binding (ortholog); INVOLVED IN microtubule bundle formation (ortholog); positive regulation of dendrite development (ortholog); positive regulation of microtubule polymerization (ortholog); PARTICIPATES IN mTOR signaling pathway; ASSOCIATED WITH Dwarfism (ortholog); intellectual disability (ortholog); FOUND IN centrosome (ortholog); cytoplasmic microtubule (ortholog); macropinosome (ortholog) 16 30207330 30284828 + 30032202 116885821 MODEL JAAIVD010000004;XM_032887162;XM_032887163;XM_032887164;XM_032887165;XM_032887167;XM_032887168 XP_032743053;XP_032743054;XP_032743055;XP_032743056;XP_032743058;XP_032743059 CAP-Gly domain-containing linker protein 1 protein-coding 626143985 Golga2 golgin A2 ENCODES a protein that exhibits identical protein binding (ortholog); importin-alpha family protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN asymmetric cell division (ortholog); centrosome cycle (ortholog); endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog); ASSOCIATED WITH Developmental Delay with Hypotonia, Myopathy, and Brain Abnormalities (ortholog); neuromuscular disease (ortholog); FOUND IN cis-Golgi network (ortholog); COPII-coated ER to Golgi transport vesicle (ortholog); endoplasmic reticulum exit site (ortholog) 5 3322785 3342375 - 22301074;30032202 116901149 MODEL JAAIVD010000023;XM_032902773;XM_032902774;XM_032902775;XM_032902776;XM_032902777;XM_032902778;XM_032902779;XM_032902781 XP_032758664;XP_032758665;XP_032758666;XP_032758667;XP_032758668;XP_032758669;XP_032758670;XP_032758672 golgin subfamily A member 2 protein-coding 626144027 LOC116897733 E3 ubiquitin-protein ligase makorin-1-like 4 98617073 98618507 - 22301074;30032202 116897733 MODEL JAAIVD010000003;XM_032899179 XP_032755070 protein-coding 626144031 LOC116889641 heterogeneous nuclear ribonucleoprotein A3-like 1 142855487 142856633 - 116889641 MODEL JAAIVD010000025 pseudo 626144032 LOC116893472 homeobox protein ceh-36-like 2 180315462 180318744 - 22301074;30032202 116893472 MODEL JAAIVD010000001;XM_032895229 XP_032751120 protein-coding 626144038 Atp6v0e2 ATPase H+ transporting V0 subunit e2 ENCODES a protein that exhibits proton-transporting ATPase activity, rotational mechanism (ortholog); INVOLVED IN proton transmembrane transport (ortholog); synaptic vesicle lumen acidification (ortholog); FOUND IN synaptic vesicle membrane (ortholog) 6 92432567 92437086 - 22301074;30032202 116903858 MODEL JAAIVD010000024;XM_032906601 XP_032762492 V-type proton ATPase subunit e 2 protein-coding 626144046 LOC116898556 putative sperm motility kinase W 4 154808632 154809670 + 116898556 MODEL JAAIVD010000003 pseudo 626144047 LOC116900812 ubiquitin-40S ribosomal protein S27a-like 5 31066881 31067363 - 22301074;30032202 116900812 MODEL JAAIVD010000023;XM_032902525 XP_032758416 protein-coding 626144050 LOC116910765 U6 spliceosomal RNA 9 31435180 31435291 - 116910765 MODEL JAAIVD010000002;XR_004389274 snrna 626144053 Kin Kin17 DNA and RNA binding protein ENCODES a protein that exhibits double-stranded DNA binding (ortholog); RNA binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA replication (ortholog); FOUND IN cytosol (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) 14 16174794 16185160 + 30032202 116883751 MODEL JAAIVD010000009;XM_032884996 XP_032740887 DNA/RNA-binding protein KIN17 protein-coding 626144062 LOC116902089 histone H3.3-like 5 129854922 129855331 + 116902089 MODEL JAAIVD010000023 pseudo 626144063 LOC116894648 proteasome subunit alpha type-7-like 2 200409614 200410350 + 116894648 MODEL JAAIVD010000001 pseudo 626144064 Fosl1 FOS like 1, AP-1 transcription factor subunit ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); promoter-specific chromatin binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); female pregnancy (ortholog); gene expression (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); cervical squamous cell carcinoma (ortholog); colon adenocarcinoma (ortholog); FOUND IN nucleoplasm (ortholog); presynaptic membrane (ortholog); RNA polymerase II transcription regulator complex (ortholog) 2 2218472 2226676 - 22301074;30032202 116890719 MODEL JAAIVD010000001;XM_032891169 XP_032747060 fos-related antigen 1 protein-coding 626144073 LOC116893120 ornithine decarboxylase-like 2 74487111 74488589 - 116893120 MODEL JAAIVD010000001 pseudo 626144074 Spink2 serine peptidase inhibitor Kazal type 2 INVOLVED IN acrosome assembly (ortholog); fertilization (ortholog); male germ cell proliferation (ortholog); ASSOCIATED WITH spermatogenic failure 29 (ortholog); FOUND IN acrosomal vesicle (ortholog); cytoplasm (ortholog); neuron projection (ortholog) 11 33946348 33952244 - 22301074;30032202 116912574 MODEL JAAIVD010000006;XM_032916689 XP_032772580 serine protease inhibitor Kazal-type 2 protein-coding 626144082 LOC116904682 small nucleolar RNA SNORA7 6 30904636 30904775 + 116904682 MODEL JAAIVD010000024;XR_004388380 snorna 626144085 Atxn2 ataxin 2 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); INVOLVED IN cerebellar Purkinje cell differentiation (ortholog); homeostasis of number of cells (ortholog); negative regulation of multicellular organism growth (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); genetic disease (ortholog); late onset Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 16 32028882 32122776 - 22301074;30032202 116885778 MODEL JAAIVD010000004;XM_032887100;XM_032887101;XM_032887102;XM_032887103;XM_032887104;XM_032887105;XM_032887106;XM_032887107 XP_032742991;XP_032742992;XP_032742993;XP_032742994;XP_032742995;XP_032742996;XP_032742997;XP_032742998 ataxin-2 protein-coding 626144129 Zfp36 ZFP36 ring finger protein ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); C-C chemokine binding (ortholog); enzyme binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); 3'-UTR-mediated mRNA stabilization (ortholog); cellular response to epidermal growth factor stimulus (ortholog); ASSOCIATED WITH alopecia (ortholog); arthritis (ortholog); breast cancer (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytoplasm (ortholog); cytoplasmic stress granule (ortholog) 2 167615453 167617961 + 1511903;22301074;30032202 116892393 MODEL JAAIVD010000001;X63369;XM_032894065 CAA44970;XP_032749956 mRNA decay activator protein ZFP36 protein-coding 626144135 LOC116889299 proliferating cell nuclear antigen-like X 58429496 58430663 + 116889299 MODEL JAAIVD010000014 pseudo 626144136 LOC116899808 small nucleolar RNA SNORA72 4 88850886 88851017 - 116899808 MODEL JAAIVD010000003;XR_004387810 snorna 626144139 Iws1 interacts with SUPT6H, CTD assembly factor 1 INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); regulation of mRNA export from nucleus (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 15 12144308 12176226 - 30032202 116885022 MODEL JAAIVD010000010;XM_032886264 XP_032742155 protein IWS1 homolog protein-coding 626144157 LOC116888898 POU domain, class 5, transcription factor 1-like X 116366531 116367834 - 116888898 MODEL JAAIVD010000014 pseudo 626144158 Qrsl1 glutaminyl-tRNA amidotransferase subunit QRSL1 ENCODES a protein that exhibits glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN glutaminyl-tRNAGln biosynthesis via transamidation (ortholog); mitochondrial translation (ortholog); regulation of protein stability (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 40 (ortholog); genetic disease (ortholog); Mitochondrial Cardiomyopathy (ortholog); FOUND IN glutamyl-tRNA(Gln) amidotransferase complex (ortholog); mitochondrion (ortholog) 18 43576266 43601273 - 22301074;30032202 116886996 MODEL JAAIVD010000013;XM_032888479 XP_032744370 glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial protein-coding 626144173 LOC116902522 small nucleolar RNA SNORD24 5 9743271 9743345 - 116902522 MODEL JAAIVD010000023;XR_004388131 snorna 626144176 Mlxipl MLX interacting protein like ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to glucose stimulus (ortholog); energy homeostasis (ortholog); fatty acid homeostasis (ortholog); PARTICIPATES IN glycolysis/gluconeogenesis pathway; ASSOCIATED WITH coronary artery disease (ortholog); Coronary Disease (ortholog); end stage renal disease (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 18887013 18921840 - 22301074;30032202 116885620 MODEL JAAIVD010000004;XM_032886920;XM_032886921;XM_032886922;XM_032886923 XP_032742811;XP_032742812;XP_032742813;XP_032742814 carbohydrate-responsive element-binding protein protein-coding 626144211 Tssk4 testis specific serine kinase 4 ENCODES a protein that exhibits ATP binding (ortholog); identical protein binding (ortholog); magnesium ion binding (ortholog); INVOLVED IN fertilization (ortholog); flagellated sperm motility (ortholog); peptidyl-serine phosphorylation (ortholog); FOUND IN motile cilium (ortholog); sperm flagellum (ortholog) 12 69354619 69357342 - 22301074;30032202 116913491 MODEL JAAIVD010000007;XM_032917693;XM_032917694 XP_032773584;XP_032773585 testis-specific serine/threonine-protein kinase 4 protein-coding 626144221 LOC116909729 DNA-directed RNA polymerases I and III subunit RPAC2-like 9 58465842 58466441 - 116909729 MODEL JAAIVD010000002 pseudo 626144222 LOC116895711 uncharacterized LOC116895711 3 215743822 215749603 - 116895711 MODEL JAAIVD010000012;XR_004387307 ncrna 626144227 LOC116903056 taste receptor type 2 member 3-like 6 125730386 125731297 - 22301074;30032202 116903056 MODEL JAAIVD010000024;XM_032905355 XP_032761246 protein-coding 626144230 LOC116914678 uncharacterized LOC116914678 13 73829379 73839438 + 116914678 MODEL JAAIVD010000008;XR_004389761 ncrna 626144234 Gja8 gap junction protein alpha 8 ENCODES a protein that exhibits gap junction channel activity (ortholog); identical protein binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell-cell signaling (ortholog); gap junction-mediated intercellular transport (ortholog); ASSOCIATED WITH anterior segment dysgenesis (ortholog); cataract (ortholog); cataract 1 multiple types (ortholog); FOUND IN connexin complex (ortholog); plasma membrane (ortholog) 3 60388685 60390289 + 22301074;30032202 116895401 MODEL JAAIVD010000012;XM_032896686 XP_032752577 gap junction alpha-8 protein protein-coding 626144239 Slfnl1 schlafen like 1 1 36449866 36454870 - 116897323 MODEL JAAIVD010000025;XM_032899077 XP_032754968 schlafen-like protein 1 protein-coding 626144248 Tspan11 tetraspanin 11 6 19950632 19988949 - 22301074;30032202 116903230 MODEL JAAIVD010000024;XM_032905607 XP_032761498 tetraspanin-11 protein-coding 626144258 LOC116885186 DNA-directed RNA polymerases I and III subunit RPAC2 16 6792158 6793694 - 22301074;30032202 116885186 MODEL JAAIVD010000004;XM_032886403 XP_032742294 protein-coding 626144264 LOC116906030 40S ribosomal protein S16-like 7 32898832 32899313 - 116906030 MODEL JAAIVD010000026 pseudo 626144265 Usp28 ubiquitin specific peptidase 28 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); ASSOCIATED WITH prostate cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); protein-containing complex (ortholog) 8 43473100 43531810 + 22301074;30032202 116906643 MODEL JAAIVD010000027;XM_032909419 XP_032765310 ubiquitin carboxyl-terminal hydrolase 28 protein-coding 626144295 LOC116895882 heterogeneous nuclear ribonucleoprotein F-like 3 110641574 110643552 + 116895882 MODEL JAAIVD010000012 pseudo 626144296 LOC116910656 small nucleolar RNA SNORA70 9 68331004 68331136 - 116910656 MODEL JAAIVD010000002;XR_004389190 snorna 626144299 LOC116906836 cytochrome b5 reductase 4 ENCODES a protein that exhibits cytochrome-b5 reductase activity, acting on NAD(P)H (ortholog); flavin adenine dinucleotide binding (ortholog); heme binding (ortholog); INVOLVED IN cell development (ortholog); glucose homeostasis (ortholog); insulin secretion (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); type 2 diabetes mellitus (ortholog); FOUND IN endoplasmic reticulum (ortholog); perinuclear region of cytoplasm (ortholog) 8 81055699 81107582 + 22301074;30032202 116906836 MODEL JAAIVD010000027;XM_032909723;XM_032909724 XP_032765614;XP_032765615 protein-coding 626144320 Rnf141 ring finger protein 141 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN protein autoubiquitination (ortholog); regulation of DNA-templated transcription (ortholog) 2 90608661 90634554 + 30032202 116891658 MODEL JAAIVD010000001;XM_032892905;XM_032892906 XP_032748796;XP_032748797 protein-coding 626144333 Bmt2 base methyltransferase of 25S rRNA 2 homolog ENCODES a protein that exhibits protein-containing complex binding (ortholog); S-adenosyl-L-methionine binding (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to methionine (ortholog); cellular response to nutrient levels (ortholog) 6 124536526 124594232 - 30032202 116904069 MODEL JAAIVD010000024;XM_032906932 XP_032762823 S-adenosylmethionine sensor upstream of mTORC1 protein-coding 626144342 LOC116886978 60S ribosomal protein L37a-like 18 43174403 43174732 + 22301074 116886978 MODEL JAAIVD010000013;XM_032888468 XP_032744359 protein-coding 626144345 Vps8 VPS8 subunit of CORVET complex INVOLVED IN endosomal vesicle fusion (ortholog); ASSOCIATED WITH Contracture (ortholog); FOUND IN CORVET complex (ortholog); early endosome (ortholog) 4 6112700 6310722 + 22301074;30032202 116898708 MODEL JAAIVD010000003;XM_032899998 XP_032755889 vacuolar protein sorting-associated protein 8 homolog protein-coding 626144397 LOC116913240 translationally-controlled tumor protein-like 12 75684925 75688817 - 116913240 MODEL JAAIVD010000007 pseudo 626144398 LOC116895055 small nucleolar RNA SNORA17 2 141248591 141248724 - 116895055 MODEL JAAIVD010000001;XR_004387236 snorna 626144401 LOC116889477 receptor of activated protein C kinase 1-like 1 137041286 137041848 - 30032202 116889477 MODEL JAAIVD010000025;XM_032890519 XP_032746410 protein-coding 626144406 Cpne5 copine 5 INVOLVED IN positive regulation of dendrite extension (ortholog); FOUND IN neuron projection (ortholog); neuronal cell body (ortholog) 18 4638820 4720395 + 30032202 116887237 MODEL JAAIVD010000013;XM_032888797;XM_032888798;XM_032888799 XP_032744688;XP_032744689;XP_032744690 copine-5 protein-coding 626144438 LOC116889772 U6 spliceosomal RNA 116889772 MODEL JAAIVD010000100;XR_004386508 snrna 626144439 LOC116914349 protein Tex24-like 13 59238660 59242576 - 116914349 MODEL JAAIVD010000008;XM_032918563 XP_032774454 protein-coding 626144444 LOC116911821 small nucleolar RNA SNORA48 10 36964053 36964191 - 116911821 MODEL JAAIVD010000005;XR_004389358 snorna 626144447 LOC116884924 transcription factor BTF3-like 15 12315075 12331387 + 116884924 MODEL JAAIVD010000010 pseudo 626144448 Zbtb14 zinc finger and BTB domain containing 14 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cardiac septum development (ortholog); coronary vasculature development (ortholog); heart valve development (ortholog); FOUND IN aggresome (ortholog); cytosol (ortholog); nucleolus (ortholog) 4 178969506 178975628 + 22301074;30032202 116899705 MODEL JAAIVD010000003;XM_032901730;XM_032901731;XM_032901732 XP_032757621;XP_032757622;XP_032757623 zinc finger and BTB domain-containing protein 14 protein-coding 626144461 LOC116887241 complement C4-like 18 7220934 7235267 - 22301074;30032202 116887241 MODEL JAAIVD010000013;XM_032888804 XP_032744695 protein-coding 626144506 LOC116888732 dystrophin-like X 42064726 42104653 - 30032202 116888732 MODEL JAAIVD010000014;XM_032890023 XP_032745914 protein-coding 626144512 LOC116888808 40S ribosomal protein S6-like 1 103061078 103061881 + 116888808 MODEL JAAIVD010000025 pseudo 626144513 LOC116887869 uncharacterized LOC116887869 X 47336182 47360179 + 116887869 MODEL JAAIVD010000014 pseudo 626144514 Tmem106b transmembrane protein 106B ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN dendrite morphogenesis (ortholog); lysosomal lumen acidification (ortholog); lysosomal protein catabolic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Frontotemporal Lobar Degeneration (ortholog); genetic disease (ortholog); FOUND IN endosome (ortholog); lysosomal membrane (ortholog); lysosome (ortholog) 6 125606725 125626137 - 30032202 116904072 MODEL JAAIVD010000024;XM_032906936 XP_032762827 protein-coding 626144527 Mrpl49 mitochondrial ribosomal protein L49 ASSOCIATED WITH Combined Oxidative Phosphorylation Deficiency 60 (ortholog); melanoma (ortholog); Perrault Syndrome 1 (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrial ribosome (ortholog); mitochondrion (ortholog) 2 1633954 1636820 + 22301074;30032202 116890683 MODEL JAAIVD010000001;XM_032891092 XP_032746983 39S ribosomal protein L49, mitochondrial protein-coding 626144535 Pla2g7 phospholipase A2 group VII ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); calcium-independent phospholipase A2 activity (ortholog); phospholipid binding (ortholog); INVOLVED IN lipid oxidation (ortholog); low-density lipoprotein particle remodeling (ortholog); phosphatidylcholine catabolic process (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Acute Coronary Syndrome (ortholog); asthma (ortholog); FOUND IN extracellular space (ortholog); high-density lipoprotein particle (ortholog); low-density lipoprotein particle (ortholog) 4 86230552 86250278 - 22301074;30032202 116899148 MODEL JAAIVD010000003;XM_032900699 XP_032756590 platelet-activating factor acetylhydrolase protein-coding 626144550 Ldhb lactate dehydrogenase B ENCODES a protein that exhibits identical protein binding (ortholog); kinase binding (ortholog); L-lactate dehydrogenase (NAD+) activity (ortholog); INVOLVED IN lactate metabolic process (ortholog); NAD+ metabolic process (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); Breast Neoplasms (ortholog); ductal carcinoma in situ (ortholog); FOUND IN cytosol (ortholog); membrane raft (ortholog); mitochondrial inner membrane (ortholog) 6 233908 252038 - 22301074 116903068 MODEL JAAIVD010000024;XM_032905367 XP_032761258 L-lactate dehydrogenase B chain protein-coding 626144562 LOC116887860 replication protein A 14 kDa subunit-like X 44775691 44834444 - 116887860 MODEL JAAIVD010000014 pseudo 626144563 Lman2l lectin, mannose binding 2 like INVOLVED IN protein transport (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 69 (ortholog); autosomal recessive intellectual developmental disorder 52 (ortholog); bipolar disorder (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog) 4 112642002 112665168 - 30032202 116899289 MODEL JAAIVD010000003;XM_032900929;XM_032900930;XM_032900931;XM_032900932 XP_032756820;XP_032756821;XP_032756822;XP_032756823 VIP36-like protein protein-coding 626144583 Trnat-ugu transfer RNA threonine (anticodon UGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 31453690 31453762 + 116910790 MODEL JAAIVD010000002 trna 626144584 Crlf1 cytokine receptor like factor 1 ENCODES a protein that exhibits ciliary neurotrophic factor receptor binding (ortholog); cytokine activity (ortholog); cytokine binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via STAT (ortholog); negative regulation of motor neuron apoptotic process (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH cold-induced sweating syndrome (ortholog); cold-induced sweating syndrome 1 (ortholog); cone-rod dystrophy 12 (ortholog); FOUND IN CRLF-CLCF1 complex (ortholog) 13 12747605 12758791 + 22301074;30032202 116914732 MODEL JAAIVD010000008;XM_032919166;XM_032919167;XM_032919168 XP_032775057;XP_032775058;XP_032775059 cytokine receptor-like factor 1 protein-coding 626144604 Slc27a3 solute carrier family 27 member 3 ENCODES a protein that exhibits fatty-acyl-CoA synthase activity (ortholog); long-chain fatty acid-CoA ligase activity (ortholog); very long-chain fatty acid-CoA ligase activity (ortholog); INVOLVED IN fatty acid transport (ortholog); long-chain fatty acid metabolic process (ortholog); FOUND IN endoplasmic reticulum (ortholog); mitochondrion (ortholog) 3 63239245 63243990 + 30032202 116896608 MODEL JAAIVD010000012;XM_032897860 XP_032753751 protein-coding 626144618 LOC116900078 von Ebner gland protein 1-like 5 10394964 10399605 + 30032202 116900078 MODEL JAAIVD010000023;XM_032901864 XP_032757755 protein-coding 626144629 LOC116894410 keratin-associated protein 13-1-like 2 158579393 158591072 + 116894410 MODEL JAAIVD010000001;XM_032896115;XR_004387025 XP_032752006 protein-coding 626144637 Uhmk1 U2AF homology motif kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); enzyme binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN neuron projection development (ortholog); peptidyl-serine phosphorylation (ortholog); positive regulation of translational initiation (ortholog); ASSOCIATED WITH Cerebral Visual Impairment and Intellectual Disability (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); dendrite cytoplasm (ortholog) 10 49382720 49402172 - 22301074;30032202 116910858 MODEL JAAIVD010000005;XM_032914619 XP_032770510 serine/threonine-protein kinase Kist protein-coding 626144649 Erfl ETS repressor factor like 2 169774266 169778683 + 22301074;30032202 116894480 MODEL JAAIVD010000001;XM_032896190 XP_032752081 ETS domain-containing transcription factor ERF-like protein-coding 626144656 Cxcl11 C-X-C motif chemokine ligand 11 ENCODES a protein that exhibits chemokine activity (ortholog); CXCR3 chemokine receptor binding (ortholog); heparin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); chemokine-mediated signaling pathway (ortholog); ASSOCIATED WITH bacterial pneumonia (ortholog); bronchiolitis obliterans (ortholog); celiac disease (ortholog) 11 5211905 5214846 - 22301074;30032202 116912481 MODEL JAAIVD010000006;XM_032916547 XP_032772438 C-X-C motif chemokine 11 protein-coding 626144664 Dusp29 dual specificity phosphatase 29 ENCODES a protein that exhibits MAP kinase phosphatase activity (ortholog); protein homodimerization activity (ortholog); protein tyrosine/serine/threonine phosphatase activity (ortholog); INVOLVED IN glucose homeostasis (ortholog); muscle cell differentiation (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-containing complex (ortholog) 12 91454227 91494294 - 22301074;30032202 116913569 MODEL JAAIVD010000007;XM_032917788 XP_032773679 Dupd1 dual specificity phosphatase DUPD1;dual specificity phosphatase and pro isomerase domain containing 1 protein-coding 626144672 LOC116903943 small nuclear ribonucleoprotein Sm D1-like 6 101180779 101181334 + 116903943 MODEL JAAIVD010000024 pseudo 626144673 Tnfsf13b TNF superfamily member 13b INVOLVED IN B cell costimulation (ortholog); B cell differentiation (ortholog); B cell homeostasis (ortholog); ASSOCIATED WITH Chronic Hepatitis B (ortholog); COVID-19 (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); perinuclear region of cytoplasm (ortholog) 13 73799099 73829913 - 22301074;30032202 116914677 MODEL JAAIVD010000008;XM_032919084;XM_032919085;XM_032919086;XM_032919087;XM_032919088;XM_032919089;XM_032919090;XM_032919091 XP_032774975;XP_032774976;XP_032774977;XP_032774978;XP_032774979;XP_032774980;XP_032774981;XP_032774982 tumor necrosis factor ligand superfamily member 13B protein-coding 626144692 LOC116907218 uncharacterized LOC116907218 1 159659350 159660144 + 116907218 MODEL JAAIVD010000025;XR_004388811 ncrna 626144696 Cdc25a cell division cycle 25A ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein kinase binding (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); G2/M transition of mitotic cell cycle (ortholog); mitotic nuclear membrane disassembly (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); breast carcinoma (ortholog); cervical cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 100486063 100504445 + 22301074;30032202 116907643 MODEL JAAIVD010000027;XM_032910707;XM_032910708;XM_032910710 XP_032766598;XP_032766599;XP_032766601 M-phase inducer phosphatase 1 protein-coding 626144723 LOC116901701 UPF0606 protein KIAA1549L-like 5 81946707 81951031 - 116901701 MODEL JAAIVD010000023;XM_032903829 XP_032759720 protein-coding 626144730 LOC116898584 BUB3-interacting and GLEBS motif-containing protein ZNF207-like 4 167399054 167406854 + 116898584 MODEL JAAIVD010000003 pseudo 626144731 LOC116883633 uncharacterized LOC116883633 14 70003491 70016758 - 116883633 MODEL JAAIVD010000009;XR_004385775 ncrna 626144737 LOC116897886 thymosin beta-10-like 4 29775086 29775217 + 22301074;30032202 116897886 MODEL JAAIVD010000003;XM_032899291 XP_032755182 protein-coding 626144740 LOC116915196 small nucleolar RNA SNORA29 13 52997252 52997396 + 116915196 MODEL JAAIVD010000008;XR_004389850 snorna 626144743 Onecut2 one cut homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN anatomical structure morphogenesis (ortholog); cell fate commitment (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); polycystic liver disease (ortholog); Prostatic Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog) 15 66879279 66926270 - 30032202 116884634 MODEL JAAIVD010000010;XM_032885775 XP_032741666 one cut domain family member 2 protein-coding 626144748 Lonrf1 LON peptidase N-terminal domain and ring finger 1 13 50828542 50857205 + 22301074 116914646 MODEL JAAIVD010000008;XM_032919041;XM_032919042 XP_032774932;XP_032774933 LON peptidase N-terminal domain and RING finger protein 1 protein-coding 626144766 Ltf lactotransferrin ENCODES a protein that exhibits cysteine-type endopeptidase inhibitor activity (ortholog); heparin binding (ortholog); iron ion binding (ortholog); INVOLVED IN antibacterial humoral response (ortholog); antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); bone morphogenesis (ortholog); ASSOCIATED WITH Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis (ortholog); arthropathy (ortholog); candidiasis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 8 101598104 101621434 + 22301074;30032202 116907022 MODEL JAAIVD010000027;XM_032909961 XP_032765852 protein-coding 626144787 Ankrd1 ankyrin repeat domain 1 ENCODES a protein that exhibits actin binding (ortholog); DNA binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN cardiac muscle tissue morphogenesis (ortholog); cellular response to hypoxia (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH Brugada syndrome (ortholog); Cardiomegaly (ortholog); cardiomyopathy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 2 37713782 37722187 + 30032202 116893791 MODEL JAAIVD010000001;XM_032895495 XP_032751386 ankyrin repeat domain-containing protein 1 protein-coding 626144800 LOC116890047 meiosis inhibitor protein 1-like 1 251805489 251820958 + 30032202 116890047 MODEL JAAIVD010000025;XM_032890819 XP_032746710 protein-coding 626144809 LOC116887655 mitotic spindle assembly checkpoint protein MAD2A-like 18 23341799 23360745 - 116887655 MODEL JAAIVD010000013 pseudo 626144810 Eif2ak2 eukaryotic translation initiation factor 2 alpha kinase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); eukaryotic translation initiation factor 2alpha kinase activity (ortholog); identical protein binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); cellular response to amino acid starvation (ortholog); endoplasmic reticulum unfolded protein response (ortholog); PARTICIPATES IN ceramide signaling pathway; platelet-derived growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); Cardiovirus Infections (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 7 14356312 14382920 + 22301074;30032202 116905899 MODEL JAAIVD010000026;XM_032908889 XP_032764780 interferon-induced, double-stranded RNA-activated protein kinase protein-coding 626144830 LOC116891785 phospholipid hydroperoxide glutathione peroxidase-like 2 100485044 100486294 - 116891785 MODEL JAAIVD010000001 pseudo 626144831 Hook1 hook microtubule tethering protein 1 ENCODES a protein that exhibits actin binding (ortholog); identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (ortholog); FHF complex (ortholog); HOPS complex (ortholog) 1 58818386 58869914 + 22301074;30032202 116900141 MODEL JAAIVD010000025;XM_032901918 XP_032757809 protein Hook homolog 1 protein-coding 626144857 LOC116905631 alpha-enolase-like 7 21285751 21286475 - 116905631 MODEL JAAIVD010000026 pseudo 626144858 LOC116889573 U6 spliceosomal RNA X 40774323 40774429 - 116889573 MODEL JAAIVD010000014;XR_004386489 snrna 626144861 Lgi3 leucine rich repeat LGI family member 3 INVOLVED IN regulation of exocytosis (ortholog); ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH MUSCLE TONE ABNORMALITIES AND DISTAL SKELETAL DEFECTS (ortholog); FOUND IN extracellular space (ortholog); juxtaparanode region of axon (ortholog); synaptic vesicle (ortholog) 12 53815062 53822187 - 22301074;30032202 116913565 MODEL JAAIVD010000007;XM_032917778 XP_032773669 leucine-rich repeat LGI family member 3 protein-coding 626144873 LOC116886323 PRAME family member 8-like 1 14548766 14551360 - 22301074;30032202 116886323 MODEL JAAIVD010000025;XM_032887775 XP_032743666 protein-coding 626144879 LOC116885823 heterogeneous nuclear ribonucleoprotein M-like 16 4125834 4128703 - 116885823 MODEL JAAIVD010000004 pseudo 626144880 LOC116895279 60S ribosomal protein L13-like 3 7037567 7038161 + 116895279 MODEL JAAIVD010000012 pseudo 626144881 LOC116908162 40S ribosomal protein S26-like 8 40511924 40513749 + 116908162 MODEL JAAIVD010000027 pseudo 626144882 LOC116903024 developmentally-regulated GTP-binding protein 1-like 6 155667470 155669023 - 22301074;30032202 116903024 MODEL JAAIVD010000024;XM_032905334 XP_032761225 protein-coding 626144887 Pml PML nuclear body scaffold ENCODES a protein that exhibits cobalt ion binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN apoptotic process (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); cell fate commitment (ortholog); PARTICIPATES IN mTOR signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); breast ductal carcinoma (ortholog); clear cell renal cell carcinoma (ortholog); FOUND IN chromosome, telomeric region (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 52091970 52122395 - 22301074;30032202 116907271 MODEL JAAIVD010000027;XM_032910226 XP_032766117 promyelocytic leukemia;protein PML protein-coding 626144900 LOC116906510 small nucleolar RNA U3 7 78191923 78192136 + 116906510 MODEL JAAIVD010000026;XR_004388740 snorna 626144903 LOC116884405 40S ribosomal protein S25-like 15 65745734 65746158 - 116884405 MODEL JAAIVD010000010 pseudo 626144904 LOC116909850 olfactory receptor 6C1-like 1 160951567 160953341 + 22301074;30032202 116909850 MODEL JAAIVD010000025;XM_032913615 XP_032769506 protein-coding 626144908 LOC116890202 keratin, type II cytoskeletal 2 oral 1 261182569 261190776 + 22301074;30032202 116890202 MODEL JAAIVD010000025;XM_032890937 XP_032746828 protein-coding 626144920 LOC116900787 WAP four-disulfide core domain protein 15B-like 5 153764594 153764978 + 22301074 116900787 MODEL JAAIVD010000023;XM_032902498 XP_032758389 protein-coding 626144924 Nr1i2 nuclear receptor subfamily 1 group I member 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); nuclear receptor activity (ortholog); nuclear receptor binding (ortholog); INVOLVED IN cellular response to molecule of bacterial origin (ortholog); cellular response to type I interferon (ortholog); gene expression (ortholog); ASSOCIATED WITH adenocarcinoma (ortholog); Barrett's esophagus (ortholog); calcinosis (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 4 23204252 23244120 - 22301074;30032202 116898839 MODEL JAAIVD010000003;XM_032900193 XP_032756084 protein-coding 626144937 LOC116893195 transmembrane 9 superfamily member 3-like 2 105185149 105189972 - 116893195 MODEL JAAIVD010000001 pseudo 626144938 Il4 interleukin 4 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN B cell costimulation (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); cellular response to mercury ion (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; interleukin-12 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); Acute Hepatitis (ortholog); Acute Lung Injury (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 9 36098574 36104434 - 22301074;30032202 116910505 MODEL JAAIVD010000002;XM_032914402 XP_032770293 interleukin-4 protein-coding 626144946 Fgf8 fibroblast growth factor 8 ENCODES a protein that exhibits chemoattractant activity (ortholog); growth factor activity (ortholog); type 1 fibroblast growth factor receptor binding (ortholog); INVOLVED IN aorta morphogenesis (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH 22q11 Deletion Syndrome (ortholog); breast cancer (ortholog); Cardiovascular Abnormalities (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 2 45209976 45215771 - 22301074;30032202 116893811 MODEL JAAIVD010000001;XM_032895522;XM_032895523;XM_032895524;XM_032895525;XM_032895526 XP_032751413;XP_032751414;XP_032751415;XP_032751416;XP_032751417 protein-coding 626144961 Gls glutaminase ENCODES a protein that exhibits glutaminase activity (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); glutamate biosynthetic process (ortholog); intracellular glutamate homeostasis (ortholog); ASSOCIATED WITH CASGID syndrome (ortholog); developmental and epileptic encephalopathy 71 (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN mitochondrion (ortholog) 4 123193339 123264201 + 22301074;30032202 116899373 MODEL JAAIVD010000003;XM_032901086;XM_032901087;XM_032901089 XP_032756977;XP_032756978;XP_032756980 glutaminase kidney isoform, mitochondrial protein-coding 626144991 LOC116893114 U1 small nuclear ribonucleoprotein C-like 2 70173276 70175302 + 116893114 MODEL JAAIVD010000001 pseudo 626144992 LOC116893264 dynein light chain 1, cytoplasmic-like 2 143364614 143368143 - 116893264 MODEL JAAIVD010000001 pseudo 626144993 Bcl7b BAF chromatin remodeling complex subunit BCL7B FOUND IN SWI/SNF complex (ortholog) 16 18838979 18853205 - 116885586 MODEL JAAIVD010000004;XM_032886883 XP_032742774 B-cell CLL/lymphoma 7 protein family member B protein-coding 626145003 LOC116885861 uncharacterized LOC116885861 16 7322911 7334022 - 116885861 MODEL JAAIVD010000004 pseudo 626145004 Znf512 zinc finger protein 512 FOUND IN pericentric heterochromatin (ortholog) 7 22685297 22716009 - 22301074 116905969 MODEL JAAIVD010000026;XM_032908974;XM_032908975;XM_032908976;XM_032908977 XP_032764865;XP_032764866;XP_032764867;XP_032764868 protein-coding 626145031 Slc5a2 solute carrier family 5 member 2 ENCODES a protein that exhibits alpha-glucoside transmembrane transporter activity (ortholog); D-glucose transmembrane transporter activity (ortholog); D-glucose:sodium symporter activity (ortholog); INVOLVED IN alpha-glucoside transport (ortholog); D-glucose import across plasma membrane (ortholog); D-glucose transmembrane transport (ortholog); PARTICIPATES IN sodium-glucose cotransporter mediated glucose transport pathway; ASSOCIATED WITH familial renal glucosuria (ortholog); genetic disease (ortholog); hypertension (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); plasma membrane (ortholog) 2 73665538 73671637 - 22301074;30032202 116891439 MODEL JAAIVD010000001;XM_032892500 XP_032748391 sodium/glucose cotransporter 2 protein-coding 626145048 Usp20 ubiquitin specific peptidase 20 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); cysteine-type endopeptidase activity (ortholog); G protein-coupled receptor binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); canonical NF-kappaB signal transduction (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); FOUND IN centrosome (ortholog) 5 4602692 4629206 - 22301074 116901170 MODEL JAAIVD010000023;XM_032902827;XM_032902828 XP_032758718;XP_032758719 ubiquitin carboxyl-terminal hydrolase 20 protein-coding 626145079 LOC116894837 U6 spliceosomal RNA 2 169498257 169498363 - 116894837 MODEL JAAIVD010000001;XR_004387052 snrna 626145082 Pmpcb peptidase, mitochondrial processing subunit beta ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN protein processing (ortholog); protein processing involved in protein targeting to mitochondrion (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH genetic disease (ortholog); multiple mitochondrial dysfunctions syndrome 6 (ortholog); FOUND IN mitochondrial processing peptidase complex (ortholog); mitochondrion (ortholog) 6 151049015 151061854 + 22301074;30032202 116904179 MODEL JAAIVD010000024;XM_032907088 XP_032762979 mitochondrial-processing peptidase subunit beta protein-coding 626145099 Rock1 Rho associated coiled-coil containing protein kinase 1 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); Rho-dependent protein serine/threonine kinase activity (ortholog); small GTPase binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); aortic valve morphogenesis (ortholog); apical constriction (ortholog); PARTICIPATES IN E-cadherin signaling pathway; eicosanoid signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH acute promyelocytic leukemia (ortholog); basal cell carcinoma (ortholog); Germ Cell and Embryonal Neoplasms (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytoskeleton (ortholog); lamellipodium (ortholog) 15 33941444 34059491 + 22301074;30032202 116884685 MODEL JAAIVD010000010;XM_032885865;XM_032885866;XM_032885867 XP_032741756;XP_032741757;XP_032741758 rho-associated protein kinase 1 protein-coding 626145144 LOC116897430 U6 spliceosomal RNA 3 222908957 222909062 - 116897430 MODEL JAAIVD010000012;XR_004387471 snrna 626145147 LOC116889806 ubiquitin-conjugating enzyme E2 variant 1-like 116889806 MODEL JAAIVD010000762 pseudo 626145148 Zc2hc1a zinc finger C2HC-type containing 1A 3 141747081 141784655 + 116897022 MODEL JAAIVD010000012;XM_032898633;XM_032898634 XP_032754524;XP_032754525 zinc finger C2HC domain-containing protein 1A protein-coding 626145163 Srpk3 SRSF protein kinase 3 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN muscle tissue development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH congenital myopathy (ortholog); congenital myopathy 1B (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 128803134 128807746 - 22301074;30032202 116889117 MODEL JAAIVD010000014;XM_032890285 XP_032746176 protein-coding 626145182 Lats1 large tumor suppressor kinase 1 ENCODES a protein that exhibits ATP binding (ortholog); magnesium ion binding (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); hippo signaling (ortholog); hormone-mediated signaling pathway (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); Ependymomas (ortholog); Glandular and Epithelial Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); microtubule organizing center (ortholog) 2 229329049 229364106 - 22301074;30032202 116893040 MODEL JAAIVD010000001;XM_032895004 XP_032750895 serine/threonine-protein kinase LATS1 protein-coding 626145194 LOC116910187 uncharacterized LOC116910187 9 67007970 67009848 - 116910187 MODEL JAAIVD010000002;XR_004389140 ncrna 626145198 Fam78a family with sequence similarity 78 member A 5 3547813 3565872 + 116901157 MODEL JAAIVD010000023;XM_032902799;XM_032902800;XM_032902801 XP_032758690;XP_032758691;XP_032758692 protein FAM78A protein-coding 626145211 Abhd18 abhydrolase domain containing 18 FOUND IN mitochondrion (ortholog) 3 113004843 113035898 - 116896908 MODEL JAAIVD010000012;XM_032898466;XM_032898467;XM_032898468 XP_032754357;XP_032754358;XP_032754359 protein ABHD18 protein-coding 626145231 LOC116903487 PRELI domain-containing protein 1, mitochondrial-like 6 54402162 54402885 + 116903487 MODEL JAAIVD010000024 pseudo 626145232 Znf800 zinc finger protein 800 INVOLVED IN acinar cell differentiation (ortholog); endocrine pancreas development (ortholog) 6 131332692 131356573 + 116904087 MODEL JAAIVD010000024;XM_032906955;XM_032906956;XM_032906957;XM_032906958 XP_032762846;XP_032762847;XP_032762848;XP_032762849 protein-coding 626145251 LOC116902865 olfactory receptor 2F1-like 6 97751903 97752844 + 22301074 116902865 MODEL JAAIVD010000024;XM_032905195 XP_032761086 protein-coding 626145254 LOC116888780 destrin-like X 3036421 3038094 - 22301074;30032202 116888780 MODEL JAAIVD010000014;XM_032890065 XP_032745956 protein-coding 626145259 Hoxc11 homeobox C11 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); embryonic digit morphogenesis (ortholog); embryonic skeletal joint morphogenesis (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 260125287 260128474 - 22301074;30032202 116890189 MODEL JAAIVD010000025;XM_032890925 XP_032746816 homeobox protein Hox-C11 protein-coding 626145264 Spire2 spire type actin nucleation factor 2 INVOLVED IN actin cytoskeleton organization (ortholog); cleavage furrow formation (ortholog); establishment of meiotic spindle localization (ortholog); FOUND IN cell cortex (ortholog); cleavage furrow (ortholog); cytoplasmic vesicle membrane (ortholog) 17 42942223 42978319 + 30032202 116886235 MODEL JAAIVD010000011;XM_032887640 XP_032743531 protein spire homolog 2 protein-coding 626145283 Abt1 activator of basal transcription 1 INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); spinal cord motor neuron differentiation (ortholog); ASSOCIATED WITH Disease Progression (ortholog); Stomach Neoplasms (ortholog); FOUND IN transcription regulator complex (ortholog) 14 42425118 42427208 - 30032202 116883555 MODEL JAAIVD010000009;XM_032884735 XP_032740626 protein-coding 626145290 LOC116912320 vomeronasal type-2 receptor 116-like 11 19291615 19299992 + 22301074;30032202 116912320 MODEL JAAIVD010000006;XM_032916345;XM_032916346;XM_032916348;XM_032916349;XM_032916350 XP_032772236;XP_032772237;XP_032772239;XP_032772240;XP_032772241 protein-coding 626145307 Fshb follicle stimulating hormone subunit beta ENCODES a protein that exhibits follicle-stimulating hormone activity (ortholog); INVOLVED IN follicle-stimulating hormone signaling pathway (ortholog); G protein-coupled receptor signaling pathway (ortholog); ovarian follicle development (ortholog); PARTICIPATES IN follicle-stimulating hormone signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); amenorrhea (ortholog); Female Infertility (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); follicle-stimulating hormone complex (ortholog) 5 84972451 84976295 - 22301074;30032202 116900525 MODEL JAAIVD010000023;XM_032902255 XP_032758146 follitropin subunit beta protein-coding 626145314 LOC116909927 olfactory receptor 6C76-like 1 161320160 161321133 + 22301074;30032202 116909927 MODEL JAAIVD010000025;XM_032913731 XP_032769622 protein-coding 626145318 LOC116912282 NACHT and WD repeat domain-containing protein 2 11 20831122 20848134 + 22301074 116912282 MODEL JAAIVD010000006;XM_032916278 XP_032772169 protein-coding 626145326 Thnsl1 threonine synthase like 1 FOUND IN mitochondrion (ortholog) 14 2899260 2906689 - 30032202 116883657 MODEL JAAIVD010000009;XM_032884852 XP_032740743 threonine synthase-like 1 protein-coding 626145334 Cldn23 claudin 23 ASSOCIATED WITH atopic dermatitis (ortholog) 13 51249201 51251173 + 30032202 116914857 MODEL JAAIVD010000008;XM_032919309 XP_032775200 claudin-23 protein-coding 626145339 LOC116909886 protein RoBo-1-like 9 39809507 39814557 - 116909886 MODEL JAAIVD010000002;XM_032913625 XP_032769516 protein-coding 626145349 Clcn3 chloride voltage-gated channel 3 ENCODES a protein that exhibits antiporter activity (ortholog); chloride channel activity (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); chloride transmembrane transport (ortholog); chloride transport (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy 11 (ortholog); Disease Progression (ortholog); FOUND IN apical plasma membrane (ortholog); axon terminus (ortholog); cytoplasmic vesicle (ortholog) 13 28028663 28099839 + 22301074;30032202;8155321 116914987 MODEL D17521;JAAIVD010000008;XM_032919387;XM_032919388;XM_032919390;XM_032919391;XM_032919392;XM_032919393;XM_032919394;XM_032919395 BAA04471;XP_032775278;XP_032775279;XP_032775281;XP_032775282;XP_032775283;XP_032775284;XP_032775285;XP_032775286 ClC-3 H(+)/Cl(-) exchange transporter 3;protein kinase C-regulated chloride channel protein-coding 626145393 Glipr1 GLI pathogenesis related 1 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); nephroblastoma (ortholog) 1 190206481 190217709 - 22301074;30032202 116908932 MODEL JAAIVD010000025;XM_032912393 XP_032768284 glioma pathogenesis-related protein 1 protein-coding 626145403 LOC116902986 protein lifeguard 1-like 6 135935758 135963439 + 30032202 116902986 MODEL JAAIVD010000024;XM_032905305 XP_032761196 protein-coding 626145418 LOC116886195 chymotrypsinogen B 17 31378345 31381262 - 22301074;30032202 116886195 MODEL JAAIVD010000011;XM_032887572;XM_032887573 XP_032743463;XP_032743464 protein-coding 626145432 Nop9 NOP9 nucleolar protein ASSOCIATED WITH Breast Neoplasms (ortholog) 12 69249059 69256319 - 22301074;30032202 116913659 MODEL JAAIVD010000007;XM_032917945 XP_032773836 nucleolar protein 9 protein-coding 626145446 LOC116894574 aldose reductase-related protein 2-like 1 73540062 73544730 + 116894574 MODEL JAAIVD010000025 pseudo 626145447 Pycr3 pyrroline-5-carboxylate reductase 3 ENCODES a protein that exhibits identical protein binding (ortholog); pyrroline-5-carboxylate reductase activity (ortholog); INVOLVED IN L-proline biosynthetic process (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); intercellular bridge (ortholog); mitotic spindle (ortholog) 1 248236010 248240952 - 22301074;30032202 116912799 MODEL JAAIVD010000025;XM_032916967 XP_032772858 protein-coding 626145457 LOC116914366 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 13 76177384 76271043 - 116914366 MODEL JAAIVD010000008 pseudo 626145458 Ccn3 cellular communication network factor 3 ENCODES a protein that exhibits hormone activity (ortholog); integrin binding (ortholog); Notch binding (ortholog); INVOLVED IN angiogenesis (ortholog); bone regeneration (ortholog); cell adhesion mediated by integrin (ortholog); ASSOCIATED WITH COVID-19 (ortholog); long QT syndrome (ortholog); pre-eclampsia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 229161004 229169029 + 22301074;30032202 116911468 MODEL JAAIVD010000025;XM_032915452 XP_032771343 CCN family member 3 protein-coding 626145467 LOC116900873 olfactory receptor 10AG1-like 5 68963129 68964614 + 116900873 MODEL JAAIVD010000023 pseudo 626145468 Trnag-ucc transfer RNA glycine (anticodon UCC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48633457 48633528 - 116910832 MODEL JAAIVD010000002 trna 626145469 LOC116884825 peroxiredoxin-1-like 15 67071957 67072549 + 116884825 MODEL JAAIVD010000010 pseudo 626145470 LOC116897944 olfactory receptor 187-like 4 43046001 43046936 - 22301074;30032202 116897944 MODEL JAAIVD010000003;XM_032899344 XP_032755235 protein-coding 626145474 Slc44a5 solute carrier family 44 member 5 ENCODES a protein that exhibits choline transmembrane transporter activity (ortholog); INVOLVED IN choline transport (ortholog); FOUND IN plasma membrane (ortholog) 3 7180892 7246208 - 22301074;30032202 116896140 MODEL JAAIVD010000012;XM_032897124;XM_032897125 XP_032753015;XP_032753016 choline transporter-like protein 5 protein-coding 626145503 Eloa elongin A INVOLVED IN regulation of transcription by RNA polymerase II (ortholog); transcription elongation by RNA polymerase II (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); FOUND IN elongin complex (ortholog); site of DNA damage (ortholog); transcription elongation factor complex (ortholog) 1 22213836 22230647 + 22301074 116894453 MODEL JAAIVD010000025;XM_032896162 XP_032752053 elongin-A protein-coding 626145518 Krt80 keratin 80 FOUND IN cytoplasm (ortholog); desmosome (ortholog); intermediate filament (ortholog) 1 261721032 261741309 + 22301074;30032202 116890214 MODEL JAAIVD010000025;XM_032890950 XP_032746841 keratin, type II cytoskeletal 80 protein-coding 626145529 Fsd1 fibronectin type III and SPRY domain containing 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); regulation of cell division (ortholog); regulation of cytokinesis (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); microtubule (ortholog) 4 87379128 87389164 + 22301074 116899162 MODEL JAAIVD010000003;XM_032900723;XM_032900724 XP_032756614;XP_032756615 fibronectin type III and SPRY domain-containing protein 1 protein-coding 626145546 Copb1 coat protein complex I subunit beta 1 INVOLVED IN intra-Golgi vesicle-mediated transport (ortholog); PARTICIPATES IN protein kinase C (PKC) signaling pathway; ASSOCIATED WITH Baralle-Macken Syndrome (ortholog); cataract (ortholog); osteochondrodysplasia (ortholog); FOUND IN COPI vesicle coat (ortholog); COPI-coated vesicle (ortholog); cytosol (ortholog) 2 87264358 87298723 + 22301074;30032202 116891634 MODEL JAAIVD010000001;XM_032892848;XM_032892849 XP_032748739;XP_032748740 COPI coat complex subunit beta 1;coatomer subunit beta protein-coding 626145575 Trnac-gca transfer RNA cysteine (anticodon GCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 6 92757236 92757307 + 116904843 MODEL JAAIVD010000024 trna 626145576 LOC116887250 butyrophilin subfamily 1 member A1-like 18 7197368 7206247 - 30032202 116887250 MODEL JAAIVD010000013;XM_032888817 XP_032744708 protein-coding 626145588 LOC116905736 pyruvate kinase PKM-like 7 4181427 4182942 + 116905736 MODEL JAAIVD010000026 pseudo 626145589 Slc27a1 solute carrier family 27 member 1 ENCODES a protein that exhibits biotin transmembrane transporter activity (ortholog); efflux transmembrane transporter activity (ortholog); fatty acid transmembrane transporter activity (ortholog); INVOLVED IN adiponectin-activated signaling pathway (ortholog); biotin import across plasma membrane (ortholog); biotin transport (ortholog); ASSOCIATED WITH familial hyperlipidemia (ortholog); glucose intolerance (ortholog); hyperinsulinism (ortholog); FOUND IN basal plasma membrane (ortholog); caveola (ortholog); endoplasmic reticulum (ortholog) 13 13377936 13395571 - 30032202 116914476 MODEL JAAIVD010000008;XM_032918776;XM_032918777;XM_032918778;XM_032918779 XP_032774667;XP_032774668;XP_032774669;XP_032774670 long-chain fatty acid transport protein 1 protein-coding 626145615 LOC116898607 40S ribosomal protein S20-like 1 40670769 40671137 + 116898607 MODEL JAAIVD010000025 pseudo 626145616 LOC116884107 U4 spliceosomal RNA 14 75345625 75345765 + 116884107 MODEL JAAIVD010000009;XR_004385840 snrna 626145619 Actl6b actin like 6B INVOLVED IN chromatin remodeling (ortholog); dendrite development (ortholog); nervous system development (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN nBAF complex (ortholog); nucleus (ortholog); SWI/SNF complex (ortholog) 16 16451440 16467631 - 30032202 116885533 MODEL JAAIVD010000004;XM_032886830;XM_032886831 XP_032742721;XP_032742722 actin-like protein 6B protein-coding 626145639 Nfkbib NFKB inhibitor beta INVOLVED IN cellular response to lipopolysaccharide (ortholog); inflammatory response (ortholog); regulation of canonical NF-kappaB signal transduction (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway 2 167239860 167247438 + 22301074;30032202 116892378 MODEL JAAIVD010000001;XM_032894041 XP_032749932 NF-kappa-B inhibitor beta protein-coding 626145649 Rfesd Rieske Fe-S domain containing 3 221177468 221202212 + 22301074 116897360 MODEL JAAIVD010000012;XM_032899118;XM_032899119;XR_004387423 XP_032755009;XP_032755010 Rieske domain-containing protein protein-coding 626145663 LOC116901827 betaine--homocysteine S-methyltransferase 1-like 1 126637241 126642707 + 30032202 116901827 MODEL JAAIVD010000025;XM_032904032 XP_032759923 protein-coding 626145669 Tm2d2 TM2 domain containing 2 13 61436859 61442463 - 116914525 MODEL JAAIVD010000008;XM_032918856 XP_032774747 TM2 domain-containing protein 2 protein-coding 626145677 Gbx2 gastrulation brain homeobox 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II core promoter sequence-specific DNA binding (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN autonomic nervous system development (ortholog); axon guidance (ortholog); branching involved in blood vessel morphogenesis (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN nucleus (ortholog) 4 161930401 161933188 - 22301074;30032202 116898260 MODEL JAAIVD010000003;XM_032899612 XP_032755503 homeobox protein GBX-2 protein-coding 626145683 LOC116908813 zinc finger protein 69 homolog 9 33554020 33558675 - 22301074 116908813 MODEL JAAIVD010000002;XM_032912218;XR_004389028;XR_004389029 XP_032768109 protein-coding 626145695 LOC116900250 olfactory receptor 1013-like 5 63066055 63066990 + 22301074;30032202 116900250 MODEL JAAIVD010000023;XM_032902002 XP_032757893 protein-coding 626145698 Arhgap29 Rho GTPase activating protein 29 ENCODES a protein that exhibits PDZ domain binding (ortholog); ASSOCIATED WITH cleft lip (ortholog); COVID-19 (ortholog); EEC syndrome (ortholog); FOUND IN cytoplasm (ortholog); protein-containing complex (ortholog) 3 37813729 37884441 - 22301074;30032202 116896305 MODEL JAAIVD010000012;XM_032897391 XP_032753282 rho GTPase-activating protein 29 protein-coding 626145725 LOC116894142 olfactory receptor 52L1 2 104099909 104100851 - 22301074 116894142 MODEL JAAIVD010000001;XM_032895860 XP_032751751 protein-coding 626145728 Acbd3 acyl-CoA binding domain containing 3 ENCODES a protein that exhibits protein kinase A regulatory subunit binding (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 10 59049533 59077102 + 22301074;30032202 116911030 MODEL JAAIVD010000005;XM_032914768 XP_032770659 Golgi resident protein GCP60 protein-coding 626145740 Kiaa2012 KIAA2012 ortholog 4 132934569 132985524 - 116898516 MODEL JAAIVD010000003;XM_032899742 XP_032755633 uncharacterized protein KIAA2012 homolog protein-coding 626145755 LOC116890594 small nucleolar RNA SNORA17 1 97756792 97756924 + 116890594 MODEL JAAIVD010000025;XR_004386751 snorna 626145758 LOC116906898 cytochrome P450 4F6 1 157439196 157466346 - 22301074 116906898 MODEL JAAIVD010000025;XM_032909814 XP_032765705 protein-coding 626145774 Hyal2 hyaluronidase 2 ENCODES a protein that exhibits enzyme binding (ortholog); hyaluronic acid binding (ortholog); hyaluronoglucuronidase activity (ortholog); INVOLVED IN cartilage development (ortholog); cellular response to fibroblast growth factor stimulus (ortholog); cellular response to interleukin-1 (ortholog); ASSOCIATED WITH CLEFT LIP AND PALATE-CRANIOFACIAL DYSMORPHISM-CONGENITAL HEART DEFECT-HEARING LOSS SYNDROME (ortholog); genetic disease (ortholog); Kidney Reperfusion Injury (ortholog); FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); cytoplasm (ortholog) 8 98884775 98889693 + 22301074;30032202 116907529 MODEL JAAIVD010000027;XM_032910544;XM_032910545 XP_032766435;XP_032766436 hyaluronidase-2 protein-coding 626145785 LOC116890504 small nucleolar RNA SNORA48 1 208345464 208345600 - 116890504 MODEL JAAIVD010000025 pseudo 626145786 Rftn2 raftlin family member 2 INVOLVED IN dsRNA transport (ortholog); response to exogenous dsRNA (ortholog) 4 129601338 129656068 - 116899392 MODEL JAAIVD010000003;XM_032901117 XP_032757008 raftlin-2 protein-coding 626145799 LOC116913338 syncytin-B 12 54817574 54820226 + 30032202 116913338 MODEL JAAIVD010000007;XM_032917489 XP_032773380 protein-coding 626145804 LOC116914198 U7 small nuclear RNA 12 67973754 67973812 + 116914198 MODEL JAAIVD010000007;XR_004389733 snrna 626145807 LOC116893270 probable 18S rRNA (guanine-N(7))-methyltransferase 2 143804997 143805979 - 116893270 MODEL JAAIVD010000001 pseudo 626145808 LOC116889016 diphosphoinositol polyphosphate phosphohydrolase 3-alpha-like X 16593075 16593668 - 116889016 MODEL JAAIVD010000014 pseudo 626145809 LOC116899295 cytochrome c oxidase subunit 5B, mitochondrial INVOLVED IN response to peptide hormone (ortholog); response to thyroid hormone (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); hypertension (ortholog); Myocardial Ischemia (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 4 112901808 112903686 + 22301074;30032202 116899295 MODEL JAAIVD010000003;XM_032900942 XP_032756833 protein-coding 626145817 Hagh hydroxyacylglutathione hydrolase ENCODES a protein that exhibits hydroxyacylglutathione hydrolase activity (ortholog); INVOLVED IN glutathione biosynthetic process (ortholog); glutathione metabolic process (ortholog); PARTICIPATES IN glyoxalase metabolic pathway; Leigh disease pathway; primary hyperoxaluria type 2 pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); Glyoxalase II Deficiency (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 9 2134881 2149416 + 22301074;30032202 116909218 MODEL JAAIVD010000002;XM_032912719 XP_032768610 hydroxyacylglutathione hydrolase, mitochondrial protein-coding 626145830 LOC116902475 U6 spliceosomal RNA 5 64339324 64339427 + 116902475 MODEL JAAIVD010000023;XR_004388093 snrna 626145833 Smu1 SMU1 DNA replication regulator and spliceosomal factor INVOLVED IN mRNA splicing, via spliceosome (ortholog); FOUND IN nucleus (ortholog); U2-type precatalytic spliceosome (ortholog) 1 117479997 117498753 + 22301074;30032202 116902575 MODEL JAAIVD010000025;XM_032905032 XP_032760923 WD40 repeat-containing protein SMU1 protein-coding 626145849 LOC116900338 cyclin-dependent kinase inhibitor 2A 1 64990508 64999317 + 30032202 116900338 MODEL JAAIVD010000025;XM_032902096 XP_032757987 protein-coding 626145856 Phldb3 pleckstrin homology like domain family B member 3 ENCODES a protein that exhibits enzyme binding (ortholog) 2 170087131 170105575 - 116892481 MODEL JAAIVD010000001;XM_032894209 XP_032750100 pleckstrin homology-like domain family B member 3 protein-coding 626145876 Idi1 isopentenyl-diphosphate delta isomerase 1 ENCODES a protein that exhibits isopentenyl-diphosphate delta-isomerase activity (ortholog); magnesium ion binding (ortholog); manganese ion binding (ortholog); INVOLVED IN cholesterol biosynthetic process via desmosterol (ortholog); cholesterol biosynthetic process via lathosterol (ortholog); isoprenoid biosynthetic process (ortholog); PARTICIPATES IN alendronate pharmacodynamics pathway; cholesterol biosynthetic pathway; cholesterol ester storage disease pathway; FOUND IN cytosol (ortholog); peroxisome (ortholog) 14 22584234 22591812 + 22301074;30032202 116883487 MODEL JAAIVD010000009;XM_032884645 XP_032740536 isopentenyl-diphosphate Delta-isomerase 1 protein-coding 626145885 LOC116885069 small nucleolar RNA SNORA40 15 55108788 55108916 + 116885069 MODEL JAAIVD010000010;XR_004385943 snorna 626145888 LOC116886605 CKLF-like MARVEL transmembrane domain-containing protein 2B 17 12602576 12613384 + 22301074 116886605 MODEL JAAIVD010000011;XM_032888118 XP_032744009 protein-coding 626145894 LOC116902788 murinoglobulin-1-like 6 77175014 77189808 - 22301074;30032202 116902788 MODEL JAAIVD010000024;XM_032905126 XP_032761017 protein-coding 626145909 LOC116884549 uncharacterized LOC116884549 1 270580529 270584760 + 116884549 MODEL JAAIVD010000025;XR_004385877 ncrna 626145916 LOC116895244 uncharacterized LOC116895244 3 26039693 26041109 - 22301074 116895244 MODEL JAAIVD010000012;XM_032896563 XP_032752454 uncharacterized protein LOC116895244 protein-coding 626145919 LOC116894267 uncharacterized LOC116894267 2 118763958 118767817 + 116894267 MODEL JAAIVD010000001;XM_032895976;XM_032895977 XP_032751867;XP_032751868 uncharacterized protein LOC116894267 protein-coding 626145931 Scmh1 Scm polycomb group protein homolog 1 INVOLVED IN anterior/posterior pattern specification (ortholog); chromatin remodeling (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN chromocenter (ortholog); male germ cell nucleus (ortholog) 1 36456030 36581071 - 22301074 116897291 MODEL JAAIVD010000025;XM_032899028;XM_032899036;XM_032899045;XM_032899055;XM_032899061;XM_032899070 XP_032754919;XP_032754927;XP_032754936;XP_032754946;XP_032754952;XP_032754961 polycomb protein SCMH1 protein-coding 626145965 LOC116883265 zinc finger protein 120-like 14 76837533 76845841 - 30032202 116883265 MODEL JAAIVD010000009;XM_032884257 XP_032740148 protein-coding 626145971 LOC116906494 U1 spliceosomal RNA 7 106659684 106659810 + 116906494 MODEL JAAIVD010000026 pseudo 626145972 LOC116902514 small nucleolar RNA SNORA71 5 137708207 137708336 - 116902514 MODEL JAAIVD010000023;XR_004388123 snorna 626145975 Rgl2 ral guanine nucleotide dissociation stimulator like 2 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN negative regulation of cardiac muscle cell apoptotic process (ortholog); positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction (ortholog); regulation of Ral protein signal transduction (ortholog) 18 6937584 6945640 + 22301074;30032202 116887579 MODEL JAAIVD010000013;XM_032889204 XP_032745095 ral guanine nucleotide dissociation stimulator-like 2 protein-coding 626145997 LOC116888683 60S ribosomal protein L7-like X 37200216 37200708 - 116888683 MODEL JAAIVD010000014 pseudo 626145998 Enah ENAH actin regulator ENCODES a protein that exhibits profilin binding (ortholog); SH3 domain binding (ortholog); WW domain binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actin polymerization or depolymerization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); hepatocellular carcinoma (ortholog); stomach cancer (ortholog); FOUND IN cytosol (ortholog); filopodium (ortholog); focal adhesion (ortholog) 10 60234190 60347175 - 30032202 116911392 MODEL JAAIVD010000005;XM_032915345;XM_032915346;XM_032915347;XM_032915348;XM_032915349;XM_032915350;XM_032915351;XM_032915352;XM_032915353 XP_032771236;XP_032771237;XP_032771238;XP_032771239;XP_032771240;XP_032771241;XP_032771242;XP_032771243;XP_032771244 protein enabled homolog protein-coding 626146036 Tmem175 transmembrane protein 175 ENCODES a protein that exhibits arachidonate binding (ortholog); potassium channel activity (ortholog); potassium ion leak channel activity (ortholog); INVOLVED IN lysosomal lumen pH elevation (ortholog); neuron cellular homeostasis (ortholog); phagosome-lysosome fusion (ortholog); FOUND IN endosome (ortholog); endosome membrane (ortholog); lysosomal membrane (ortholog) 11 18415497 18434559 + 22301074;30032202 116912172 MODEL JAAIVD010000006;XM_032916098 XP_032771989 endosomal/lysosomal potassium channel TMEM175 protein-coding 626146051 LOC116905649 craniofacial development protein 1-like 7 37258054 37259048 + 116905649 MODEL JAAIVD010000026 pseudo 626146052 LOC116914503 arylamine N-acetyltransferase 2 13 21850058 21874615 - 22301074;30032202 116914503 MODEL JAAIVD010000008;XM_032918824;XM_032918825 XP_032774715;XP_032774716 protein-coding 626146062 LOC116904730 U1 spliceosomal RNA 6 138258374 138258534 - 116904730 MODEL JAAIVD010000024;XR_004388420 snrna 626146065 Mtmr3 myotubularin related protein 3 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity (ortholog); phosphatidylinositol-3-phosphate phosphatase activity (ortholog); INVOLVED IN cellular response to glucose starvation (ortholog); midbody abscission (ortholog); phosphatidylinositol 5-phosphate metabolic process (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog) 11 73450670 73568912 - 22301074;30032202 116912719 MODEL JAAIVD010000006;XM_032916846;XM_032916847;XM_032916848;XM_032916849;XM_032916850;XM_032916851;XM_032916852 XP_032772737;XP_032772738;XP_032772739;XP_032772740;XP_032772741;XP_032772742;XP_032772743 myotubularin-related protein 3 protein-coding 626146099 LOC116911834 small nucleolar RNA SNORA17 10 52021451 52021585 - 116911834 MODEL JAAIVD010000005;XR_004389368 snorna 626146102 Cimip3 ciliary microtubule inner protein 3 PARTICIPATES IN calcium/calcium-mediated signaling pathway; visual phototransduction pathway; ASSOCIATED WITH Hereditary Eye Diseases (ortholog) 4 82448573 82469672 + 116899085 MODEL JAAIVD010000003;XM_032900586;XM_032900587 XP_032756477;XP_032756478 Guca1anb GUCA1A neighbor;uncharacterized protein 114841037 protein-coding 626146111 Rhobtb1 Rho related BTB domain containing 1 ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog) 18 17564876 17634524 - 22301074;30032202 116887228 MODEL JAAIVD010000013;XM_032888789 XP_032744680 rho-related BTB domain-containing protein 1 protein-coding 626146125 LOC116909151 phosphoglycerate mutase 1-like 9 62788634 62789486 - 116909151 MODEL JAAIVD010000002 pseudo 626146126 LOC116884716 protocadherin beta-14 15 1072337 1077035 + 22301074 116884716 MODEL JAAIVD010000010;XM_032885902 XP_032741793 protein-coding 626146131 Fbxw8 F-box and WD repeat domain containing 8 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); Golgi organization (ortholog); insulin receptor signaling pathway (ortholog); ASSOCIATED WITH urinary bladder cancer (ortholog); FOUND IN 3M complex (ortholog); Cul7-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 16 35675881 35763733 + 22301074;30032202 116885163 MODEL JAAIVD010000004;XM_032886376 XP_032742267 F-box/WD repeat-containing protein 8 protein-coding 626146146 Cacna1f calcium voltage-gated channel subunit alpha1 F ENCODES a protein that exhibits high voltage-gated calcium channel activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN axonogenesis (ortholog); dendrite morphogenesis (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Aland Island eye disease (ortholog); cone-rod dystrophy (ortholog); congenital stationary night blindness (ortholog); FOUND IN membrane (ortholog); neuronal cell body (ortholog); perikaryon (ortholog) X 14500436 14527677 - 22301074;30032202 116888360 MODEL JAAIVD010000014;XM_032889629 XP_032745520 voltage-dependent L-type calcium channel subunit alpha-1F protein-coding 626146196 Acot9 acyl-CoA thioesterase 9 ENCODES a protein that exhibits acetyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); long-chain fatty acid metabolic process (ortholog); short-chain fatty acid metabolic process (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) X 37142623 37179513 - 30032202 116888730 MODEL JAAIVD010000014;XM_032890020 XP_032745911 acyl-coenzyme A thioesterase 9, mitochondrial protein-coding 626146215 LOC116890022 39S ribosomal protein L47, mitochondrial-like 1 195345373 195346128 - 116890022 MODEL JAAIVD010000025 pseudo 626146216 LOC116897502 small nucleolar RNA SNORA24 3 222138943 222139031 + 116897502 MODEL JAAIVD010000012 pseudo 626146217 LOC116915168 U6 spliceosomal RNA 13 31996469 31996578 + 116915168 MODEL JAAIVD010000008;XR_004389830 snrna 626146220 LOC116909066 glyceraldehyde-3-phosphate dehydrogenase-like 9 88634452 88635454 - 116909066 MODEL JAAIVD010000002 pseudo 626146221 Mkx mohawk homeobox ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to mechanical stimulus (ortholog); collagen fibril organization (ortholog); intratendonous ossification (ortholog); ASSOCIATED WITH Heterotopic Ossification (ortholog) 14 28896083 28968728 + 22301074;30032202 116883358 MODEL JAAIVD010000009;XM_032884437 XP_032740328 homeobox protein Mohawk protein-coding 626146232 LOC116900235 olfactory receptor 5AK2-like 5 62723603 62724532 - 22301074;30032202 116900235 MODEL JAAIVD010000023;XM_032901986 XP_032757877 protein-coding 626146235 LOC116890840 uncharacterized LOC116890840 2 6762793 6767345 + 116890840 MODEL JAAIVD010000001;XR_004386786 ncrna 626146239 LOC116905705 uncharacterized LOC116905705 7 65812673 65816661 + 116905705 MODEL JAAIVD010000026;XR_004388562 ncrna 626146244 LOC116899875 small nucleolar RNA SNORA17 4 169351040 169351164 - 116899875 MODEL JAAIVD010000003 pseudo 626146245 LOC116885324 actin, cytoplasmic 2-like 16 46786 48555 - 116885324 MODEL JAAIVD010000004;XR_004386002 pseudo 626146248 LOC116891036 ubiquitin-conjugating enzyme E2 D2-like 2 22336677 22337875 + 116891036 MODEL JAAIVD010000001 pseudo 626146249 LOC116910942 zinc finger protein 665-like 10 75825223 75826478 + 116910942 MODEL JAAIVD010000005 pseudo 626146250 LOC116888697 cytochrome c oxidase subunit 7A2, mitochondrial-like X 5301809 5302150 - 22301074;30032202 116888697 MODEL JAAIVD010000014;XM_032889987 XP_032745878 protein-coding 626146255 Mfsd6l major facilitator superfamily domain containing 6 like 9 48156916 48159030 + 30032202 116909271 MODEL JAAIVD010000002;XM_032912799 XP_032768690 major facilitator superfamily domain-containing protein 6-like protein-coding 626146260 Snrpb2 small nuclear ribonucleoprotein polypeptide B2 ENCODES a protein that exhibits snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH connective tissue disease (ortholog); disease of cellular proliferation (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytoplasmic ribonucleoprotein granule (ortholog); fibrillar center (ortholog) 5 122545011 122555085 + 30032202 116902033 MODEL JAAIVD010000023;XM_032904317 XP_032760208 U2 small nuclear ribonucleoprotein B'' protein-coding 626146271 Ube2u ubiquitin conjugating enzyme E2 U 1 54024783 54092049 - 116887678 MODEL JAAIVD010000025;XM_032889278 XP_032745169 ubiquitin-conjugating enzyme E2 U protein-coding 626146285 LOC116909581 uncharacterized LOC116909581 9 74130502 74135143 - 116909581 MODEL JAAIVD010000002;XR_004389082 ncrna 626146290 Adprhl1 ADP-ribosylhydrolase like 1 13 70444747 70460229 + 22301074 116914513 MODEL JAAIVD010000008;XM_032918838 XP_032774729 protein ADP-ribosylarginine hydrolase-like protein 1 protein-coding 626146301 Socs4 suppressor of cytokine signaling 4 INVOLVED IN negative regulation of epidermal growth factor-activated receptor activity (ortholog); PARTICIPATES IN Jak-Stat signaling pathway; ASSOCIATED WITH pre-malignant neoplasm (ortholog); Reperfusion Injury (ortholog) 12 75759552 75764504 - 22301074;30032202 116913448 MODEL JAAIVD010000007;XM_032917648 XP_032773539 protein-coding 626146306 LOC116885117 small nucleolar RNA SNORA44 15 39292756 39292884 + 116885117 MODEL JAAIVD010000010;XR_004385980 snorna 626146309 LOC116906093 mRNA turnover protein 4 homolog 7 72209670 72210491 - 116906093 MODEL JAAIVD010000026 pseudo 626146310 LOC116904882 60S ribosomal protein L27-like 7 32055386 32055815 - 22301074;30032202 116904882 MODEL JAAIVD010000026;XM_032907482 XP_032763373 protein-coding 626146314 LOC116896360 coiled-coil domain-containing protein 58-like 3 49734926 49735393 - 22301074;30032202 116896360 MODEL JAAIVD010000012;XM_032897467 XP_032753358 protein-coding 626146318 Nmnat1 nicotinamide nucleotide adenylyltransferase 1 ENCODES a protein that exhibits identical protein binding (ortholog); nicotinamide-nucleotide adenylyltransferase activity (ortholog); nicotinate-nucleotide adenylyltransferase activity (ortholog); INVOLVED IN ATP generation from poly-ADP-D-ribose (ortholog); NAD+ biosynthetic process (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); PARTICIPATES IN de novo nicotinamide adenine dinucleotide biosynthetic pathway; nicotinamide adenine dinucleotide biosynthesis, the salvage pathway; ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); Developmental Disabilities (ortholog); FOUND IN chromatin (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 1 11286248 11304174 + 22301074;30032202 116892602 MODEL JAAIVD010000025;XM_032894399;XM_032894408;XM_032894416 XP_032750290;XP_032750299;XP_032750307 nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1 protein-coding 626146333 Trpm8 transient receptor potential cation channel subfamily M member 8 ENCODES a protein that exhibits calcium channel activity (ortholog); identical protein binding (ortholog); monoatomic ion channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); calcium ion transport (ortholog); intracellular calcium ion homeostasis (ortholog); ASSOCIATED WITH migraine (ortholog); migraine without aura (ortholog); FOUND IN external side of plasma membrane (ortholog); membrane (ortholog); membrane raft (ortholog) 4 160348136 160434008 + 22301074;30032202 116898257 MODEL JAAIVD010000003;XM_032899610 XP_032755501 protein-coding 626146363 LOC116913588 epididymal secretory protein E3-beta-like 12 72132211 72132636 + 116913588 MODEL JAAIVD010000007 pseudo 626146364 Rps14 ribosomal protein S14 ENCODES a protein that exhibits mRNA 5'-UTR binding (ortholog); structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); erythrocyte differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); chromosome 5q deletion syndrome (ortholog); FOUND IN cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog); nucleolus (ortholog) 15 71165752 71170608 - 22301074;30032202 116884606 MODEL JAAIVD010000010;XM_032885747 XP_032741638 40S ribosomal protein S14 protein-coding 626146373 LOC116908641 myosin-2 9 46773101 46799831 + 22301074 116908641 MODEL JAAIVD010000002;XM_032911899;XM_032911900;XM_032911901;XM_032911902;XM_032911903 XP_032767790;XP_032767791;XP_032767792;XP_032767793;XP_032767794 protein-coding 626146429 LOC116898433 F-box/WD repeat-containing protein 2-like 4 91993238 91998002 - 116898433 MODEL JAAIVD010000003 pseudo 626146430 Tbx3 T-box transcription factor 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior axis specification, embryo (ortholog); atrioventricular bundle cell differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); colorectal cancer (ortholog); Congenital Limb Deformities (ortholog); FOUND IN cilium (ortholog); nucleus (ortholog) 16 34137607 34151490 - 22301074;30032202 116885622 MODEL JAAIVD010000004;XM_032886924;XM_032886925 XP_032742815;XP_032742816 T-box transcription factor TBX3 protein-coding 626146445 LOC116887849 uncharacterized LOC116887849 X 41252391 41253664 - 22301074 116887849 MODEL JAAIVD010000014;XM_032889354 XP_032745245 uncharacterized protein LOC116887849 protein-coding 626146448 Wdr48 WD repeat domain 48 ENCODES a protein that exhibits deubiquitinase activator activity (ortholog); DNA binding (ortholog); double-stranded DNA binding (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); DNA damage response (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH cognitive disorder (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 111132846 111165455 + 30032202 116907924 MODEL JAAIVD010000027;XM_032911136 XP_032767027 WD repeat-containing protein 48 protein-coding 626146471 Fbxo21 F-box protein 21 INVOLVED IN apoptotic process (ortholog); cytokine-mediated signaling pathway (ortholog); ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH Weight Gain (ortholog) 16 35817662 35851771 - 22301074 116885300 MODEL JAAIVD010000004;XM_032886549;XM_032886550 XP_032742440;XP_032742441 F-box only protein 21 protein-coding 626146489 LOC116890434 U7 small nuclear RNA 1 3299395 3299451 + 116890434 MODEL JAAIVD010000025 pseudo 626146490 C9H16orf89 chromosome 9 C16orf89 homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog) 9 16686748 16698655 + 30032202 116910196 MODEL JAAIVD010000002;XM_032914059 XP_032769950 UPF0764 protein C16orf89 homolog protein-coding 626146502 Tctn3 tectonic family member 3 INVOLVED IN cilium assembly (ortholog); positive regulation of apoptotic process (ortholog); smoothened signaling pathway (ortholog); ASSOCIATED WITH ciliopathy (ortholog); genetic disease (ortholog); Joubert syndrome (ortholog); FOUND IN nucleus (ortholog) 2 39717398 39731324 - 30032202 116891151 MODEL JAAIVD010000001;XM_032891939 XP_032747830 tectonic-3 protein-coding 626146520 LOC116884376 preferentially expressed antigen in melanoma-like protein 7 15 47594539 47595799 - 116884376 MODEL JAAIVD010000010 pseudo 626146521 Msh2 mutS homolog 2 ENCODES a protein that exhibits ADP binding (ortholog); ATP binding (ortholog); ATP hydrolysis activity (ortholog); INVOLVED IN B cell differentiation (ortholog); B cell mediated immunity (ortholog); determination of adult lifespan (ortholog); PARTICIPATES IN altered mismatch repair pathway; colorectal cancer pathway; mismatch repair pathway; ASSOCIATED WITH ascending colon cancer (ortholog); ataxia telangiectasia (ortholog); bile duct cancer (ortholog); FOUND IN MutSalpha complex (ortholog); MutSbeta complex (ortholog); nucleoplasm (ortholog) 7 5259542 5317060 - 22301074;30032202 116905745 MODEL JAAIVD010000026;XM_032908713 XP_032764604 DNA mismatch repair protein Msh2 protein-coding 626146541 LOC116907185 caspase-12-like 8 2164851 2168045 - 22301074;30032202 116907185 MODEL JAAIVD010000027;XM_032910146 XP_032766037 protein-coding 626146546 Ly6g5b lymphocyte antigen 6 family member G5B ENCODES a protein that exhibits identical protein binding (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 18 7714453 7716085 - 30032202 116887080 MODEL JAAIVD010000013;XM_032888590 XP_032744481 lymphocyte antigen 6 complex locus protein G5b protein-coding 626146553 Ppargc1b PPARG coactivator 1 beta ENCODES a protein that exhibits AF-2 domain binding (ortholog); nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN estrogen receptor signaling pathway (ortholog); positive regulation of cold-induced thermogenesis (ortholog); positive regulation of osteoclast differentiation (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Breast Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN cytosol (ortholog); mediator complex (ortholog); nucleoplasm (ortholog) 15 70547112 70650777 + 22301074;30032202 116884999 MODEL JAAIVD010000010;XM_032886226 XP_032742117 peroxisome proliferator-activated receptor gamma coactivator 1-beta protein-coding 626146569 LOC116894771 protein AMN1 homolog 2 214854427 214859989 - 116894771 MODEL JAAIVD010000001 pseudo 626146570 Selenot selenoprotein T ENCODES a protein that exhibits thioredoxin-disulfide reductase (NADPH) activity (ortholog); INVOLVED IN cell redox homeostasis (ortholog); cellular oxidant detoxification (ortholog); glucose homeostasis (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 3 97079699 97096959 + 30032202 116896853 MODEL JAAIVD010000012;XM_032898363 XP_032754254 thioredoxin reductase-like selenoprotein T protein-coding 626146580 Tbx19 T-box transcription factor 19 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cell fate commitment (ortholog); pituitary gland development (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Adrenal Insufficiency (ortholog); adrenocorticotropic hormone deficiency (ortholog); alcohol dependence (ortholog) 10 44308788 44330783 - 22301074;30032202 116911695 MODEL JAAIVD010000005;XM_032915651 XP_032771542 T-box transcription factor TBX19 protein-coding 626146593 LOC116905651 60S ribosomal protein L18a-like 7 18913589 18914234 + 116905651 MODEL JAAIVD010000026 pseudo 626146594 LOC116897469 U7 small nuclear RNA 3 7096505 7096559 - 116897469 MODEL JAAIVD010000012 pseudo 626146595 LOC116901967 speckle-type POZ protein-like 5 110103291 110150289 + 30032202 116901967 MODEL JAAIVD010000023;XM_032904205;XM_032904206;XM_032904207;XM_032904208 XP_032760096;XP_032760097;XP_032760098;XP_032760099 protein-coding 626146614 Prpf18 pre-mRNA processing factor 18 INVOLVED IN negative regulation of protein metabolic process (ortholog); PARTICIPATES IN spliceosome pathway 14 10980907 11007074 - 22301074;30032202 116883368 MODEL JAAIVD010000009;XM_032884480;XM_032884481;XM_032884482 XP_032740371;XP_032740372;XP_032740373 pre-mRNA-splicing factor 18 protein-coding 626146633 LOC116901528 endophilin-A2-like 1 92115967 92117832 + 22301074;30032202 116901528 MODEL JAAIVD010000025;XM_032903511 XP_032759402 protein-coding 626146638 Dsg2 desmoglein 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); INVOLVED IN bundle of His cell-Purkinje myocyte adhesion involved in cell communication (ortholog); cell adhesion (ortholog); desmosome organization (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); arrhythmogenic right ventricular dysplasia 1 (ortholog); arrhythmogenic right ventricular dysplasia 10 (ortholog); FOUND IN apical plasma membrane (ortholog); cell junction (ortholog); cell surface (ortholog) 15 23048783 23098583 - 22301074;30032202 116884545 MODEL JAAIVD010000010;XM_032885683 XP_032741574 desmoglein-2 protein-coding 626146657 LOC116887383 olfactory receptor 12D2-like 18 10210487 10211512 - 22301074 116887383 MODEL JAAIVD010000013;XM_032888978 XP_032744869 protein-coding 626146661 Trpc4ap transient receptor potential cation channel subfamily C member 4 associated protein ENCODES a protein that exhibits phosphatase binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN hair follicle maturation (ortholog); protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); Cul4A-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog) 5 134968987 135039997 - 22301074;30032202 116902182 MODEL JAAIVD010000023;XM_032904545 XP_032760436 short transient receptor potential channel 4-associated protein protein-coding 626146684 LOC116899817 small nucleolar RNA SNORA36 family 4 18202388 18202518 + 116899817 MODEL JAAIVD010000003;XR_004387817 snorna 626146687 LOC116885701 zinc finger protein 431-like 1 122383 129850 + 116885701 MODEL JAAIVD010000025 pseudo 626146688 LOC116890491 small nucleolar RNA SNORA48 1 4674216 4674359 + 116890491 MODEL JAAIVD010000025;XR_004386678 snorna 626146691 Myf6 myogenic factor 6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN muscle tissue morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autosomal dominant centronuclear myopathy (ortholog); centronuclear myopathy 1 (ortholog); congenital structural myopathy (ortholog); FOUND IN cytosol (ortholog); mitotic spindle (ortholog); nucleoplasm (ortholog) 1 185768596 185770421 - 22301074;30032202 116890008 MODEL JAAIVD010000025;XM_032890793 XP_032746684 protein-coding 626146698 LOC116896308 40S ribosomal protein S26-like 3 38344649 38345026 - 116896308 MODEL JAAIVD010000012 pseudo 626146699 LOC116903591 gamma-aminobutyric acid receptor-associated protein-like 6 52966800 52968561 + 116903591 MODEL JAAIVD010000024 pseudo 626146700 LOC116895227 eukaryotic translation initiation factor 4B-like 3 18927869 18934882 + 116895227 MODEL JAAIVD010000012 pseudo 626146701 LOC116907069 olfactory receptor 7G2-like 8 15233832 15234785 - 22301074;30032202 116907069 MODEL JAAIVD010000027;XM_032910024 XP_032765915 protein-coding 626146705 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 134420119 134420208 - 116897701 MODEL JAAIVD010000012 trna 626146706 Mycl MYCL proto-oncogene, bHLH transcription factor INVOLVED IN regulation of inner ear auditory receptor cell differentiation (ortholog); ASSOCIATED WITH lung small cell carcinoma (ortholog); medulloblastoma (ortholog); Prostatic Neoplasms (ortholog); FOUND IN chromosome (ortholog); nucleoplasm (ortholog) 1 35253503 35260353 - 22301074;30032202 116897139 MODEL JAAIVD010000025;XM_032898805;XM_032898814;XM_032898822 XP_032754696;XP_032754705;XP_032754713 protein L-Myc protein-coding 626146720 LOC116892257 39S ribosomal protein L32, mitochondrial-like 2 160534095 160534677 - 116892257 MODEL JAAIVD010000001 pseudo 626146721 Ccl1 C-C motif chemokine ligand 1 ENCODES a protein that exhibits chemokine activity (ortholog); cytokine activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to interleukin-17 (ortholog); chemotaxis (ortholog); ASSOCIATED WITH asthma (ortholog); chronic obstructive pulmonary disease (ortholog); endometriosis (ortholog); FOUND IN extracellular space (ortholog) 9 88316846 88319500 + 22301074;30032202 116910446 MODEL JAAIVD010000002;XM_032914296 XP_032770187 C-C motif chemokine 1 protein-coding 626146728 LOC116897540 U1 spliceosomal RNA 3 153114778 153114940 - 116897540 MODEL JAAIVD010000012;XR_004387554 snrna 626146731 Ihh Indian hedgehog signaling molecule ENCODES a protein that exhibits calcium ion binding (ortholog); patched binding (ortholog); very-low-density lipoprotein particle binding (ortholog); INVOLVED IN bone resorption (ortholog); branching involved in blood vessel morphogenesis (ortholog); camera-type eye development (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH acrocapitofemoral dysplasia (ortholog); annular pancreas (ortholog); autism spectrum disorder (ortholog); FOUND IN extracellular matrix (ortholog); extracellular region (ortholog); plasma membrane (ortholog) 4 148366302 148372415 - 22301074;30032202 116899515 MODEL JAAIVD010000003;XM_032901370 XP_032757261 indian hedgehog protein protein-coding 626146738 Arcn1 archain 1 coat protein complex I subunit delta INVOLVED IN adult locomotory behavior (ortholog); cerebellar Purkinje cell layer maturation (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH Ataxia (ortholog); genetic disease (ortholog); microcephaly (ortholog); FOUND IN COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog); Golgi apparatus (ortholog) 8 39273679 39301105 - 30032202 116908104 MODEL JAAIVD010000027;XM_032911382 XP_032767273 coatomer subunit delta protein-coding 626146752 Pcmtd1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 ENCODES a protein that exhibits S-adenosylmethionine-dependent methyltransferase activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog) 1 142192162 142263888 + 116903789 MODEL JAAIVD010000025;XM_032906486 XP_032762377 protein-L-isoaspartate O-methyltransferase domain-containing protein 1 protein-coding 626146761 LOC116885695 uncharacterized LOC116885695 16 10320002 10322393 - 116885695 MODEL JAAIVD010000004;XR_004386035 ncrna 626146765 Cysltr2 cysteinyl leukotriene receptor 2 ENCODES a protein that exhibits cysteinyl leukotriene receptor activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); negative regulation of glial cell proliferation (ortholog); positive regulation of angiogenesis (ortholog); PARTICIPATES IN endothelin signaling pathway; ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); asthma (ortholog); drug allergy (ortholog); FOUND IN membrane (ortholog) 12 51379857 51381005 + 22301074;30032202 116913964 MODEL JAAIVD010000007;XM_032918232 XP_032774123 protein-coding 626146770 Rell1 RELT like 1 INVOLVED IN positive regulation of p38MAPK cascade (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN microtubule cytoskeleton (ortholog); plasma membrane (ortholog) 11 20925389 20985078 - 30032202 116912332 MODEL JAAIVD010000006;XM_032916378 XP_032772269 RELT-like protein 1 protein-coding 626146781 LOC116888204 heterogeneous nuclear ribonucleoprotein H2-like X 126778306 126783267 + 116888204 MODEL JAAIVD010000014 pseudo 626146782 Tchhl1 trichohyalin like 1 ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog) 3 121200495 121202875 - 22301074 116895921 MODEL JAAIVD010000012;XM_032896996 XP_032752887 trichohyalin-like protein 1 protein-coding 626146786 LOC116889253 ferritin heavy polypeptide-like 17 X 22416379 22416909 - 22301074;30032202 116889253 MODEL JAAIVD010000014;XM_032890403 XP_032746294 protein-coding 626146789 Usp5 ubiquitin specific peptidase 5 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deubiquitinase activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN negative regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); negative regulation of T cell activation (ortholog); negative regulation of T cell mediated immune response to tumor cell (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytoplasm (ortholog) 6 23062327 23077265 + 22301074 116903275 MODEL JAAIVD010000024;XM_032905694;XM_032905695 XP_032761585;XP_032761586 ubiquitin carboxyl-terminal hydrolase 5 protein-coding 626146815 LOC116900875 preferentially expressed antigen in melanoma-like protein 7 5 69009551 69012349 - 22301074;30032202 116900875 MODEL JAAIVD010000023;XM_032902555 XP_032758446 protein-coding 626146820 Rnf138 ring finger protein 138 ENCODES a protein that exhibits protein kinase binding (ortholog); single-stranded DNA binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN cellular response to leukemia inhibitory factor (ortholog); DNA double-strand break processing involved in repair via single-strand annealing (ortholog); double-strand break repair via homologous recombination (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog); presynapse (ortholog) 15 22313904 22338205 + 116884443 MODEL JAAIVD010000010;XM_032885536;XM_032885537;XM_032885538 XP_032741427;XP_032741428;XP_032741429 E3 ubiquitin-protein ligase RNF138 protein-coding 626146838 Gabbr2 gamma-aminobutyric acid type B receptor subunit 2 ENCODES a protein that exhibits G protein-coupled GABA receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); neuron-glial cell signaling (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); G protein-coupled GABA receptor complex (ortholog); G protein-coupled receptor heterodimeric complex (ortholog) 1 99742737 100082478 - 22301074;30032202 116901945 MODEL JAAIVD010000025;XM_032904180 XP_032760071 protein-coding 626146861 LOC116902819 heterogeneous nuclear ribonucleoprotein A1-like 6 84084914 84086055 - 116902819 MODEL JAAIVD010000024 pseudo 626146862 LOC116909802 hemoglobin subunit theta-1-like 9 3548133 3548765 - 116909802 MODEL JAAIVD010000002 pseudo 626146863 LOC116897870 stefin-3-like 4 21254309 21259070 + 22301074;30032202 116897870 MODEL JAAIVD010000003;XM_032899278 XP_032755169 protein-coding 626146868 LOC116890051 uncharacterized LOC116890051 1 208463907 208466157 - 116890051 MODEL JAAIVD010000025;XR_004386525 ncrna 626146872 Sell selectin L ENCODES a protein that exhibits calcium ion binding (ortholog); cell adhesion molecule binding (ortholog); glycolipid binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); cellular response to interleukin-8 (ortholog); heterotypic cell-cell adhesion (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); alcohol use disorder (ortholog); alcoholic hepatitis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); extracellular space (ortholog) 10 43293043 43312327 + 22301074;30032202 116911223 MODEL JAAIVD010000005;XM_032915120 XP_032771011 L-selectin protein-coding 626146885 LOC116905798 histone H3.3A-like 7 9678606 9679179 + 116905798 MODEL JAAIVD010000026;XR_004388567 pseudo 626146888 Taf2 TATA-box binding protein associated factor 2 ENCODES a protein that exhibits transcription cis-regulatory region binding (ortholog); INVOLVED IN G2/M transition of mitotic cell cycle (ortholog); mRNA transcription by RNA polymerase II (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 40 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN nucleus (ortholog); transcription factor TFIID complex (ortholog); transcription factor TFTC complex (ortholog) 1 229437133 229490458 - 30032202 116911529 MODEL JAAIVD010000025;XM_032915521 XP_032771412 transcription initiation factor TFIID subunit 2 protein-coding 626146918 LOC116904195 SUMO-conjugating enzyme UBC9-like 6 153207816 153208307 + 116904195 MODEL JAAIVD010000024 pseudo 626146919 Fam241a family with sequence similarity 241 member A FOUND IN Golgi apparatus (ortholog) 3 31435902 31468381 + 30032202 116896270 MODEL JAAIVD010000012;XM_032897348 XP_032753239 uncharacterized protein FAM241A protein-coding 626146925 Cog4 component of oligomeric golgi complex 4 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN glycosylation (ortholog); Golgi organization (ortholog); retrograde transport, vesicle recycling within Golgi (ortholog); ASSOCIATED WITH congenital disorder of glycosylation type IIj (ortholog); genetic disease (ortholog); pre-malignant neoplasm (ortholog); FOUND IN Golgi transport complex (ortholog) 17 30554511 30588227 + 116886456 MODEL JAAIVD010000011;XM_032887958 XP_032743849 conserved oligomeric Golgi complex subunit 4 protein-coding 626146948 LOC116913745 60S ribosomal protein L38-like 12 61736168 61736378 - 116913745 MODEL JAAIVD010000007 pseudo 626146949 LOC116892342 zinc finger protein OZF-like 2 166256233 166261657 - 30032202 116892342 MODEL JAAIVD010000001;XM_032893982 XP_032749873 protein-coding 626146956 Chrac1 chromatin accessibility complex subunit 1 INVOLVED IN chromatin remodeling (ortholog); nucleosome assembly (ortholog); regulation of DNA replication (ortholog); PARTICIPATES IN ISWI family mediated chromatin remodeling pathway; FOUND IN pericentric heterochromatin (ortholog) 1 245872379 245875931 + 22301074;30032202 116912375 MODEL JAAIVD010000025;XM_032916436 XP_032772327 chromatin accessibility complex protein 1 protein-coding 626146963 Slc4a5 solute carrier family 4 member 5 ENCODES a protein that exhibits sodium:bicarbonate symporter activity (ortholog); INVOLVED IN cerebrospinal fluid secretion (ortholog); epithelial cell development (ortholog); mitochondrion distribution (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 6 62922742 62986795 - 22301074;30032202 116903614 MODEL JAAIVD010000024;XM_032906258 XP_032762149 electrogenic sodium bicarbonate cotransporter 4 protein-coding 626146991 Wwp2 WW domain containing E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits potassium channel inhibitor activity (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); transcription regulator inhibitor activity (ortholog); INVOLVED IN extracellular transport (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of gene expression (ortholog); ASSOCIATED WITH Knee Osteoarthritis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 17 27181027 27286659 + 22301074;30032202 116886080 MODEL JAAIVD010000011;XM_032887400 XP_032743291 NEDD4-like E3 ubiquitin-protein ligase WWP2 protein-coding 626147017 LOC116901722 growth factor receptor-bound protein 7-like 5 87508813 87510323 + 116901722 MODEL JAAIVD010000023 pseudo 626147018 Rprd2 regulation of nuclear pre-mRNA domain containing 2 ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN transcription preinitiation complex (ortholog) 3 61466898 61515098 + 22301074;30032202 116896536 MODEL JAAIVD010000012;XM_032897721;XM_032897722;XM_032897723 XP_032753612;XP_032753613;XP_032753614 regulation of nuclear pre-mRNA domain-containing protein 2 protein-coding 626147037 LOC116906407 U1 spliceosomal RNA 7 68107140 68107303 - 116906407 MODEL JAAIVD010000026;XR_004388671 snrna 626147040 Tmem179 transmembrane protein 179 7 130101726 130112822 - 116905512 MODEL JAAIVD010000026;XM_032908534 XP_032764425 protein-coding 626147048 Pmel premelanosome protein ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN melanin biosynthetic process (ortholog); melanosome organization (ortholog); positive regulation of melanin biosynthetic process (ortholog); ASSOCIATED WITH coat/hair pigmentation trait (ortholog); melanoma (ortholog); FOUND IN cis-Golgi network membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 1 156182646 156192878 + 30032202 116906425 MODEL JAAIVD010000025;XM_032909220 XP_032765111 melanocyte protein PMEL protein-coding 626147063 Nt5dc3 5'-nucleotidase domain containing 3 FOUND IN cytosol (ortholog); mitochondrion (ortholog); receptor complex (ortholog) 1 165899604 165956876 + 30032202 116907692 MODEL JAAIVD010000025;XM_032910804;XM_032910816;XR_004388837 XP_032766695;XP_032766707 5'-nucleotidase domain-containing protein 3 protein-coding 626147088 Pole4 DNA polymerase epsilon 4, accessory subunit INVOLVED IN DNA-templated DNA replication (ortholog); PARTICIPATES IN nucleotide excision repair pathway; FOUND IN ATAC complex (ortholog); epsilon DNA polymerase complex (ortholog); nucleoplasm (ortholog) 6 63551693 63556955 + 22301074;30032202 116903644 MODEL JAAIVD010000024;XM_032906304 XP_032762195 DNA polymerase epsilon subunit 4 protein-coding 626147096 LOC116912441 ubiquitin-conjugating enzyme E2 variant 2-like 11 10803852 10804494 + 116912441 MODEL JAAIVD010000006 pseudo 626147097 LOC116895275 60S ribosomal protein L15-like 3 2239738 2240417 + 116895275 MODEL JAAIVD010000012 pseudo 626147098 Zfyve19 zinc finger FYVE-type containing 19 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); INVOLVED IN midbody abscission (ortholog); mitotic cytokinesis checkpoint signaling (ortholog); negative regulation of cytokinesis (ortholog); ASSOCIATED WITH Progressive Familial Intrahepatic Cholestasis 9 (ortholog); FOUND IN centrosome (ortholog); cleavage furrow (ortholog); midbody (ortholog) 5 97384608 97392256 + 22301074;30032202 116901798 MODEL JAAIVD010000023;XM_032903952;XM_032903953;XM_032903955;XM_032903956 XP_032759843;XP_032759844;XP_032759846;XP_032759847 abscission/NoCut checkpoint regulator protein-coding 626147118 LOC116902734 glutathione S-transferase alpha-4-like 6 58456227 58456962 - 22301074;30032202 116902734 MODEL JAAIVD010000024;XM_032905083 XP_032760974 protein-coding 626147123 LOC116913868 40S ribosomal protein S24-like 12 5269988 5270430 - 116913868 MODEL JAAIVD010000007 pseudo 626147124 LOC116912881 COP9 signalosome complex subunit 8-like 11 84644570 84645192 + 116912881 MODEL JAAIVD010000006 pseudo 626147125 Celf6 CUGBP Elav-like family member 6 INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); synaptic transmission, serotonergic (ortholog); vocalization behavior (ortholog); FOUND IN cytoplasm (ortholog) 8 53416278 53445702 + 30032202 116906869 MODEL JAAIVD010000027;XM_032909772;XM_032909773;XM_032909774;XM_032909775;XM_032909776;XM_032909777;XM_032909778;XM_032909779 XP_032765663;XP_032765664;XP_032765665;XP_032765666;XP_032765667;XP_032765668;XP_032765669;XP_032765670 protein-coding 626147159 LOC116909558 olfactory receptor 1468-like 9 44749408 44750346 + 22301074;30032202 116909558 MODEL JAAIVD010000002;XM_032913177 XP_032769068 protein-coding 626147162 Arfip2 ARF interacting protein 2 ENCODES a protein that exhibits GTP-dependent protein binding (ortholog); identical protein binding (ortholog); membrane curvature sensor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); mitophagy (ortholog); protein localization to phagophore assembly site (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; FOUND IN cell cortex (ortholog); cytoplasm (ortholog); Golgi apparatus (ortholog) 2 104471450 104477561 - 22301074;30032202 116891821 MODEL JAAIVD010000001;XM_032893183;XM_032893184 XP_032749074;XP_032749075 ADP ribosylation factor interacting protein 2;arfaptin-2 protein-coding 626147176 Nlgn2 neuroligin 2 ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); identical protein binding (ortholog); neurexin family protein binding (ortholog); INVOLVED IN gephyrin clustering involved in postsynaptic density assembly (ortholog); inhibitory synapse assembly (ortholog); insulin metabolic process (ortholog); ASSOCIATED WITH autistic disorder (ortholog); Hyperalgesia (ortholog); schizophrenia (ortholog); FOUND IN axon (ortholog); cell surface (ortholog); dendrite (ortholog) 9 49429906 49444694 - 22301074;30032202 116908595 MODEL JAAIVD010000002;XM_032911814;XM_032911815;XM_032911816;XM_032911817 XP_032767705;XP_032767706;XP_032767707;XP_032767708 neuroligin-2 protein-coding 626147196 Zcchc14 zinc finger CCHC-type containing 14 ASSOCIATED WITH Stroke (ortholog) 17 41261426 41306726 - 22301074 116886565 MODEL JAAIVD010000011;XM_032888083;XM_032888084 XP_032743974;XP_032743975 zinc finger CCHC domain-containing protein 14 protein-coding 626147216 Slc19a1 solute carrier family 19 member 1 ENCODES a protein that exhibits 2',3'-cyclic GMP-AMP binding (ortholog); antiporter activity (ortholog); cyclic-GMP-AMP transmembrane transporter activity (ortholog); INVOLVED IN cyclic-GMP-AMP transmembrane import across plasma membrane (ortholog); female pregnancy (ortholog); folate import across plasma membrane (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); adenoma (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 18 373242 386651 + 22301074;30032202 116887255 MODEL JAAIVD010000013;XM_032888821 XP_032744712 reduced folate transporter protein-coding 626147225 LOC116904755 small nucleolar RNA SNORA17 6 42329704 42329835 + 116904755 MODEL JAAIVD010000024;XR_004388432 snorna 626147228 Map2k4 mitogen-activated protein kinase kinase 4 ENCODES a protein that exhibits JUN kinase kinase activity (ortholog); MAP kinase kinase activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN cell growth involved in cardiac muscle cell development (ortholog); cellular response to mechanical stimulus (ortholog); cellular response to sorbitol (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ceramide signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH Brain Death (ortholog); Breast Neoplasms (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN axon (ortholog); dendrite cytoplasm (ortholog); perikaryon (ortholog) 9 45295943 45392383 - 22301074;30032202 116909722 MODEL JAAIVD010000002;XM_032913392;XM_032913393;XM_032913394;XM_032913395;XM_032913397;XM_032913398 XP_032769283;XP_032769284;XP_032769285;XP_032769286;XP_032769288;XP_032769289 dual specificity mitogen-activated protein kinase kinase 4 protein-coding 626147258 Cdx4 caudal type homeobox 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); blood vessel development (ortholog); labyrinthine layer development (ortholog) X 68340997 68350534 + 22301074;30032202 116888718 MODEL JAAIVD010000014;XM_032890010 XP_032745901 homeobox protein CDX-4 protein-coding 626147264 Fam131c family with sequence similarity 131 member C 1 16760483 16776180 - 116893361 MODEL JAAIVD010000025;XM_032895166 XP_032751057 protein FAM131C protein-coding 626147275 LOC116910888 40S ribosomal protein S10-like 10 40379792 40380272 - 116910888 MODEL JAAIVD010000005 pseudo 626147276 Wdr89 WD repeat domain 89 INVOLVED IN corpus callosum development (ortholog); ventricular system development (ortholog) 7 89795270 89827011 - 22301074 116905174 MODEL JAAIVD010000026;XM_032907948;XM_032907949;XM_032907951 XP_032763839;XP_032763840;XP_032763842 WD repeat-containing protein 89 protein-coding 626147288 Efnb2 ephrin B2 ENCODES a protein that exhibits receptor ligand activity (ortholog); signaling receptor binding (ortholog); transmembrane receptor protein tyrosine kinase activator activity (ortholog); INVOLVED IN adherens junction organization (ortholog); angiogenesis (ortholog); animal organ morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH colon carcinoma (ortholog); colorectal carcinoma (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN dendrite (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 13 75120354 75161587 + 22301074;30032202 116915108 MODEL JAAIVD010000008;XM_032919537 XP_032775428 ephrin-B2 protein-coding 626147297 Atf4 activating transcription factor 4 ENCODES a protein that exhibits cAMP response element binding (ortholog); cAMP response element binding protein binding (ortholog); DNA binding (ortholog); INVOLVED IN bone mineralization (ortholog); cellular response to amino acid starvation (ortholog); cellular response to glucose starvation (ortholog); PARTICIPATES IN endoplasmic reticulum stress - the unfolded protein response pathway; ASSOCIATED WITH borna disease (ortholog); Hypoxia (ortholog); invasive ductal carcinoma (ortholog); FOUND IN ATF1-ATF4 transcription factor complex (ortholog); ATF4-CREB1 transcription factor complex (ortholog); centrosome (ortholog) 1 250024246 250026283 + 30032202 116913774 MODEL JAAIVD010000025;XM_032918082 XP_032773973 cyclic AMP-dependent transcription factor ATF-4 protein-coding 626147304 LOC116889371 high mobility group protein B4-like X 82780251 82780786 + 116889371 MODEL JAAIVD010000014 pseudo 626147305 LOC116912987 small nucleolar RNA SNORA17 11 34413210 34413337 - 116912987 MODEL JAAIVD010000006;XR_004389550 snorna 626147308 LOC116902872 olfactory receptor 9A4-like 6 98426322 98427347 - 22301074 116902872 MODEL JAAIVD010000024;XM_032905203 XP_032761094 protein-coding 626147312 Cacna2d4 calcium voltage-gated channel auxiliary subunit alpha2delta 4 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); detection of light stimulus involved in visual perception (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); cone-rod dystrophy 14 (ortholog); FOUND IN voltage-gated calcium channel complex (ortholog) 6 27404685 27518474 - 30032202 116903343 MODEL JAAIVD010000024;XM_032905799;XM_032905800;XM_032905801 XP_032761690;XP_032761691;XP_032761692 voltage-dependent calcium channel subunit alpha-2/delta-4 protein-coding 626147359 Psmg1 proteasome assembly chaperone 1 ENCODES a protein that exhibits molecular adaptor activity (ortholog); proteasome binding (ortholog); INVOLVED IN cerebellar granule cell precursor proliferation (ortholog); chaperone-mediated protein complex assembly (ortholog); proteasome core complex assembly (ortholog); ASSOCIATED WITH ulcerative colitis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 4 48682576 48692317 + 22301074;30032202 116898956 MODEL JAAIVD010000003;XM_032900372 XP_032756263 protein-coding 626147370 Tpr translocated promoter region, nuclear basket protein ENCODES a protein that exhibits chromatin binding (ortholog); dynein complex binding (ortholog); heat shock protein binding (ortholog); INVOLVED IN cellular response to heat (ortholog); cellular response to interferon-alpha (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); ASSOCIATED WITH Autosomal Recessive Intellectual Developmental Disorder 79 (ortholog); intellectual disability (ortholog); Thyroid Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic dynein complex (ortholog); kinetochore (ortholog) 10 29838063 29894614 + 22301074;30032202 116911516 MODEL JAAIVD010000005;XM_032915510 XP_032771401 nucleoprotein TPR protein-coding 626147426 LOC116888209 SNRPN upstream reading frame protein-like 1 74119791 74120003 - 30032202 116888209 MODEL JAAIVD010000025;XM_032889507 XP_032745398 protein-coding 626147429 Sgf29 SAGA complex associated factor 29 ENCODES a protein that exhibits histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); methylation-dependent protein binding (ortholog); INVOLVED IN negative regulation of DNA repair (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of cell cycle (ortholog); PARTICIPATES IN histone modification pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); diabetic retinopathy (ortholog); FOUND IN ATAC complex (ortholog); SAGA-type complex (ortholog) 2 75230977 75263631 - 30032202 116891515 MODEL JAAIVD010000001;XM_032892652;XM_032892653 XP_032748543;XP_032748544 SAGA-associated factor 29 protein-coding 626147446 Sat1 spermidine/spermine N1-acetyltransferase 1 ENCODES a protein that exhibits diamine N-acetyltransferase activity (ortholog); identical protein binding (ortholog); N-acetyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); polyamine biosynthetic process (ortholog); polyamine catabolic process (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; polyamine metabolic pathway; spermidine metabolic pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); anxiety disorder (ortholog); COVID-19 (ortholog) X 37212192 37215478 + 30032202 116888653 MODEL JAAIVD010000014;XM_032889946;XM_032889947;XM_032889948 XP_032745837;XP_032745838;XP_032745839 diamine acetyltransferase 1 protein-coding 626147463 Gdf9 growth differentiation factor 9 INVOLVED IN blastocyst development (ortholog); embryonic cleavage (ortholog); negative regulation of cell growth (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); polycystic ovary syndrome (ortholog); primary ovarian insufficiency (ortholog); FOUND IN cytoplasm (ortholog) 9 35925102 35928948 + 22301074;30032202 116909600 MODEL JAAIVD010000002;XM_032913222 XP_032769113 growth/differentiation factor 9 protein-coding 626147468 Ap2s1 adaptor related protein complex 2 subunit sigma 1 INVOLVED IN postsynaptic neurotransmitter receptor internalization (ortholog); synaptic vesicle endocytosis (ortholog); PARTICIPATES IN clathrin-dependent synaptic vesicle endocytosis; ASSOCIATED WITH COVID-19 (ortholog); familial hypocalciuric hypercalcemia 3 (ortholog); genetic disease (ortholog); FOUND IN AP-2 adaptor complex (ortholog); extrinsic component of presynaptic endocytic zone membrane (ortholog); glutamatergic synapse (ortholog) 2 172335488 172346734 - 22301074;30032202 116892586 MODEL JAAIVD010000001;XM_032894366 XP_032750257 AP-2 complex subunit sigma protein-coding 626147477 LOC116903368 60S ribosomal protein L23a-like 6 30325770 30326227 + 116903368 MODEL JAAIVD010000024 pseudo 626147478 LOC116898441 exocrine gland-secreted peptide 1-like 4 95117987 95122372 - 116898441 MODEL JAAIVD010000003 pseudo 626147479 Wscd1 WSC domain containing 1 ENCODES a protein that exhibits sulfotransferase activity (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); pre-malignant neoplasm (ortholog); FOUND IN Golgi membrane (ortholog) 9 43710194 43740861 - 22301074 116908569 MODEL JAAIVD010000002;XM_032911774 XP_032767665 WSC domain-containing protein 1 protein-coding 626147491 Phf21b PHD finger protein 21B 1 254172699 254243634 - 116914573 MODEL JAAIVD010000025;XM_032918934 XP_032774825 protein-coding 626147508 Rcvrn recoverin ENCODES a protein that exhibits calcium ion binding (ortholog); INVOLVED IN phototransduction (ortholog); regulation of calcium ion transport (ortholog); visual perception (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; visual phototransduction pathway; FOUND IN dendrite (ortholog) 9 47306332 47312964 + 22301074;30032202 116909725 MODEL JAAIVD010000002;XM_032913401 XP_032769292 protein-coding 626147514 Sspn sarcospan ENCODES a protein that exhibits protein-containing complex binding (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN plasma membrane (ortholog); sarcolemma (ortholog); transport vesicle (ortholog) 6 3657945 3689952 + 30032202 116903084 MODEL JAAIVD010000024;XM_032905405 XP_032761296 protein-coding 626147521 LOC116893096 phospholipase A and acyltransferase 5-like 2 61459389 61465948 - 30032202 116893096 MODEL JAAIVD010000001;XM_032895039 XP_032750930 protein-coding 626147527 LOC116903059 hepatitis A virus cellular receptor 1 homolog 6 75334535 75334844 + 116903059 MODEL JAAIVD010000024 pseudo 626147528 Bnipl BCL2 interacting protein like ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); negative regulation of cell population proliferation (ortholog); regulation of growth rate (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 3 61996971 62006866 + 30032202 116895411 MODEL JAAIVD010000012;XM_032896693;XM_032896694 XP_032752584;XP_032752585 bcl-2/adenovirus E1B 19 kDa-interacting protein 2-like protein protein-coding 626147546 LOC116886225 zinc finger protein 431-like 1 215340496 215371185 + 22301074;30032202 116886225 MODEL JAAIVD010000025;XM_032887659 XP_032743550 protein-coding 626147554 Orc2 origin recognition complex subunit 2 ENCODES a protein that exhibits DNA replication origin binding (ortholog); INVOLVED IN DNA replication initiation (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) 4 133900939 133936851 + 22301074;30032202 116899427 MODEL JAAIVD010000003;XM_032901172;XM_032901173;XM_032901174;XM_032901175;XM_032901176 XP_032757063;XP_032757064;XP_032757065;XP_032757066;XP_032757067 protein-coding 626147585 Tafa3 TAFA chemokine like family member 3 INVOLVED IN negative regulation of microglial cell activation (ortholog); positive regulation of microglial cell activation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular space (ortholog) 3 53338463 53345239 + 30032202 116896429 MODEL JAAIVD010000012;XM_032897580 XP_032753471 chemokine-like protein TAFA-3 protein-coding 626147595 Serinc3 serine incorporator 3 ENCODES a protein that exhibits phospholipid scramblase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); plasma membrane phospholipid scrambling (ortholog); positive regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog) 5 154310939 154340370 + 22301074;30032202 116902374 MODEL JAAIVD010000023;XM_032904872;XM_032904873 XP_032760763;XP_032760764 protein-coding 626147613 LOC116914307 KICSTOR complex protein C12orf66 homolog 13 35053893 35058052 - 116914307 MODEL JAAIVD010000008 pseudo 626147614 Zfyve26 zinc finger FYVE-type containing 26 ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN autophagosome organization (ortholog); double-strand break repair via homologous recombination (ortholog); lysosome organization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN centrosome (ortholog); early endosome (ortholog); late endosome (ortholog) 7 93330974 93392666 - 22301074;30032202 116905207 MODEL JAAIVD010000026;XM_032908020 XP_032763911 zinc finger FYVE domain-containing protein 26 protein-coding 626147659 Tbc1d25 TBC1 domain family member 25 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN regulation of autophagosome maturation (ortholog); ASSOCIATED WITH oligospermia (ortholog); FOUND IN autophagosome (ortholog) X 15559750 15589875 - 30032202 116888453 MODEL JAAIVD010000014;XM_032889732 XP_032745623 protein-coding 626147669 Rab6b RAB6B, member RAS oncogene family ENCODES a protein that exhibits myosin V binding (ortholog); INVOLVED IN Golgi organization (ortholog); protein localization to Golgi membrane (ortholog); FOUND IN ciliary basal body (ortholog); Golgi apparatus (ortholog); Golgi membrane (ortholog) 8 94411440 94478151 + 22301074 116907396 MODEL JAAIVD010000027;XM_032910349 XP_032766240 ras-related protein Rab-6B protein-coding 626147681 Tfap2b transcription factor AP-2 beta ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collecting duct development (ortholog); distal tubule development (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); Body Weight (ortholog); Char syndrome (ortholog); FOUND IN nucleus (ortholog) 4 96781931 96811797 + 22301074;30032202 116899241 MODEL JAAIVD010000003;XM_032900845 XP_032756736 transcription factor AP-2-beta protein-coding 626147694 Polr1e RNA polymerase I subunit E ENCODES a protein that exhibits RNA polymerase I general transcription initiation factor binding (ortholog); INVOLVED IN nucleolar large rRNA transcription by RNA polymerase I (ortholog); RNA polymerase I preinitiation complex assembly (ortholog); transcription initiation at RNA polymerase I promoter (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; FOUND IN fibrillar center (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 1 1467357 1482599 - 22301074;30032202 116890831 MODEL JAAIVD010000025;XM_032891352 XP_032747243 DNA-directed RNA polymerase I subunit RPA49 protein-coding 626147710 Cast calpastatin ENCODES a protein that exhibits calcium-dependent cysteine-type endopeptidase inhibitor activity (ortholog); protease binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); egg activation (ortholog); liver development (ortholog); PARTICIPATES IN the proteolytic pathway involving calcium-dependent proteases; ASSOCIATED WITH Acute Liver Failure (ortholog); acute lymphoblastic leukemia (ortholog); alcohol use disorder (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 3 220482788 220590816 + 1730065;30032202 116897354 MODEL JAAIVD010000012;X62520;XM_032899112 CAA44386;XP_032755003 protein-coding 626147743 LOC116911686 contactin-associated protein like 5-4-like 10 81174892 81223857 + 116911686 MODEL JAAIVD010000005;XM_032915641 XP_032771532 protein-coding 626147753 LOC116885079 U6 spliceosomal RNA 15 56924239 56924345 + 116885079 MODEL JAAIVD010000010;XR_004385952 snrna 626147756 LOC116908976 keratin, type I cytoskeletal 27 9 55096802 55102121 + 22301074;30032202 116908976 MODEL JAAIVD010000002;XM_032912441 XP_032768332 protein-coding 626147766 Fam120b family with sequence similarity 120 member B INVOLVED IN fat cell differentiation (ortholog); peroxisome proliferator activated receptor signaling pathway (ortholog); FOUND IN nucleus (ortholog) 14 573610 632657 - 30032202 116884040 MODEL JAAIVD010000009;XM_032885285;XM_032885286;XM_032885287 XP_032741176;XP_032741177;XP_032741178 constitutive coactivator of peroxisome proliferator-activated receptor gamma;family with sequence similarity 120B protein-coding 626147785 Wwox WW domain containing oxidoreductase ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); extrinsic apoptotic signaling pathway (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); autism spectrum disorder (ortholog); autosomal recessive spinocerebellar ataxia 12 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 17 34085387 34999386 + 22301074 116886516 MODEL JAAIVD010000011;XM_032888027 XP_032743918 WW domain-containing oxidoreductase protein-coding 626147798 Otp orthopedia homeobox ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN dopaminergic neuron differentiation (ortholog); forebrain neuron differentiation (ortholog); hypothalamus cell differentiation (ortholog); FOUND IN fibrillar center (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 3 201472611 201482054 - 22301074;30032202 116895685 MODEL JAAIVD010000012;XM_032896884 XP_032752775 homeobox protein orthopedia protein-coding 626147805 LOC116901924 elongin-C-like 1 99705534 99705997 + 116901924 MODEL JAAIVD010000025 pseudo 626147806 LOC116912624 non-histone chromosomal protein HMG-17-like 11 73358860 73359189 + 116912624 MODEL JAAIVD010000006 pseudo 626147807 LOC116899889 small nucleolar RNA SNORA17 4 38411999 38412122 + 116899889 MODEL JAAIVD010000003 pseudo 626147808 Lacc1 laccase domain containing 1 ENCODES a protein that exhibits adenosine deaminase activity (ortholog); guanosine phosphorylase activity (ortholog); oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor (ortholog); INVOLVED IN nucleotide-binding oligomerization domain containing 2 signaling pathway (ortholog); pattern recognition receptor signaling pathway (ortholog); positive regulation of cytokine production involved in immune response (ortholog); ASSOCIATED WITH genetic disease (ortholog); juvenile rheumatoid arthritis (ortholog); leprosy (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); nucleus (ortholog) 12 47358901 47366026 + 30032202 116913831 MODEL JAAIVD010000007;XM_032918143 XP_032774034 laccase domain-containing protein 1 protein-coding 626147818 Kctd3 potassium channel tetramerization domain containing 3 ASSOCIATED WITH autistic disorder (ortholog); cerebellar hypoplasia (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 10 67066688 67101435 - 22301074 116911019 MODEL JAAIVD010000005;XM_032914752;XM_032914754 XP_032770643;XP_032770645 BTB/POZ domain-containing protein KCTD3 protein-coding 626147843 LOC116910479 tumor necrosis factor ligand superfamily member 12 9 49297567 49306835 - 22301074;30032202 116910479 MODEL JAAIVD010000002;XM_032914361;XM_032914362 XP_032770252;XP_032770253 protein-coding 626147858 Tlcd5 TLC domain containing 5 ASSOCIATED WITH exfoliation syndrome (ortholog) 8 37684305 37691713 - 22301074 116907446 MODEL JAAIVD010000027;XM_032910417 XP_032766308 TLC domain-containing protein 5 protein-coding 626147865 Adarb2 adenosine deaminase RNA specific B2 (inactive) ASSOCIATED WITH Parkinson's disease (ortholog); substance-related disorder (ortholog) 14 21928700 22471509 + 22301074;30032202 116883607 MODEL JAAIVD010000009;XM_032884792;XM_032884793;XM_032884794;XM_032884795 XP_032740683;XP_032740684;XP_032740685;XP_032740686 double-stranded RNA-specific editase B2 protein-coding 626147888 LOC116903850 serine/threonine-protein kinase Sgk3 1 144595742 144658434 + 22301074 116903850 MODEL JAAIVD010000025;XM_032906585 XP_032762476 protein-coding 626147909 LOC116886015 small nucleolar RNA SNORA81 16 23999538 23999719 + 116886015 MODEL JAAIVD010000004;XR_004386084 snorna 626147912 Zbtb21 zinc finger and BTB domain containing 21 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); methyl-CpG binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 46584571 46597098 + 22301074;30032202 116898928 MODEL JAAIVD010000003;XM_032900336;XM_032900337;XM_032900338;XM_032900339;XM_032900340;XM_032900341;XM_032900343;XM_032900344;XM_032900345;XM_032900346;XM_032900347 XP_032756227;XP_032756228;XP_032756229;XP_032756230;XP_032756231;XP_032756232;XP_032756234;XP_032756235;XP_032756236;XP_032756237;XP_032756238 zinc finger and BTB domain-containing protein 21 protein-coding 626147940 LOC116888475 nucleolar and spindle-associated protein 1-like 1 231026955 231030130 + 116888475 MODEL JAAIVD010000025 pseudo 626147941 LOC116910697 small nucleolar RNA SNORA48 9 62198064 62198207 - 116910697 MODEL JAAIVD010000002;XR_004389225 snorna 626147944 LOC116906591 uncharacterized LOC116906591 8 53680564 53790045 - 116906591 MODEL JAAIVD010000027;XR_004388749;XR_004388750;XR_004388751 ncrna 626147954 Irf1 interferon regulatory factor 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic process (ortholog); canonical NF-kappaB signal transduction (ortholog); CD8-positive, alpha-beta T cell differentiation (ortholog); PARTICIPATES IN interleukin-6 signaling pathway; Jak-Stat signaling pathway; nuclear factor kappa B signaling pathway; ASSOCIATED WITH allergic conjunctivitis (ortholog); asthma (ortholog); bacterial pneumonia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 9 36243693 36250223 + 30032202 116909735 MODEL JAAIVD010000002;XM_032913412;XM_032913413 XP_032769303;XP_032769304 protein-coding 626147970 LOC116911312 heterogeneous nuclear ribonucleoprotein A3-like 10 14182520 14183586 - 116911312 MODEL JAAIVD010000005 pseudo 626147971 LOC116900586 non-histone chromosomal protein HMG-17-like 5 91482872 91483124 - 116900586 MODEL JAAIVD010000023 pseudo 626147972 LOC116887530 40S ribosomal protein S15-like 18 42570381 42570795 - 116887530 MODEL JAAIVD010000013 pseudo 626147973 LOC116910922 olfactory receptor 10X1-like 10 52974426 52975370 + 116910922 MODEL JAAIVD010000005 pseudo 626147974 LOC116884418 39S ribosomal protein L35, mitochondrial-like 15 74729347 74729892 + 116884418 MODEL JAAIVD010000010 pseudo 626147975 Foxh1 forkhead box H1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); co-SMAD binding (ortholog); DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); aorta morphogenesis (ortholog); axial mesoderm development (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH agnathia-otocephaly complex (ortholog); Conotruncal Cardiac Defects (ortholog); genetic disease (ortholog); FOUND IN activin responsive factor complex (ortholog); chromatin (ortholog); nucleus (ortholog) 1 248995023 248997202 - 22301074 116913337 MODEL JAAIVD010000025;XM_032917491 XP_032773382 forkhead box protein H1 protein-coding 626147982 Sp4 Sp4 transcription factor ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of heart contraction (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); congenital heart disease (ortholog); dilated cardiomyopathy (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 7 117836546 117894680 + 116905394 MODEL JAAIVD010000026;XM_032908345;XM_032908346;XM_032908347 XP_032764236;XP_032764237;XP_032764238 transcription factor Sp4 protein-coding 626148000 LOC116893458 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178569699 178575697 - 30032202 116893458 MODEL JAAIVD010000001;XM_032895220 XP_032751111 protein-coding 626148010 Heph hephaestin ENCODES a protein that exhibits ferroxidase activity (ortholog); INVOLVED IN intestinal iron absorption (ortholog); multicellular organismal-level iron ion homeostasis (ortholog); positive regulation of iron export across plasma membrane (ortholog); PARTICIPATES IN iron efflux pathway; ASSOCIATED WITH glaucoma (ortholog); malignant mesothelioma (ortholog); FOUND IN basolateral plasma membrane (ortholog); perinuclear region of cytoplasm (ortholog) X 55318658 55405841 + 22301074;30032202 116888529 MODEL JAAIVD010000014;XM_032889826 XP_032745717 protein-coding 626148034 Cib3 calcium and integrin binding family member 3 ENCODES a protein that exhibits calcium ion binding (ortholog); magnesium ion binding (ortholog) 13 14037343 14047013 - 22301074 116914909 MODEL JAAIVD010000008;XM_032919348;XM_032919349 XP_032775239;XP_032775240 calcium and integrin-binding family member 3 protein-coding 626148043 Wnt8a Wnt family member 8A ENCODES a protein that exhibits receptor ligand activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cell morphogenesis (ortholog); endoderm development (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH atrial fibrillation (ortholog); hypospadias (ortholog) 15 9817274 9823122 - 22301074;30032202 116884829 MODEL JAAIVD010000010;XM_032886069 XP_032741960 protein Wnt-8a protein-coding 626148053 LOC116888020 egl nine homolog 1-like X 80751233 80752878 - 116888020 MODEL JAAIVD010000014 pseudo 626148054 Etv5 ETS variant transcription factor 5 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); locomotory behavior (ortholog); male germ-line stem cell asymmetric division (ortholog); ASSOCIATED WITH Neoplastic Processes (ortholog); Prostatic Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 4 7044760 7102932 - 22301074;30032202 116898718 MODEL JAAIVD010000003;XM_032900012;XM_032900013 XP_032755903;XP_032755904 ETS translocation variant 5 protein-coding 626148076 LOC116884818 uncharacterized LOC116884818 15 23259510 23265742 + 116884818 MODEL JAAIVD010000010;XR_004385899 ncrna 626148081 Pirt phosphoinositide interacting regulator of transient receptor potential channels ENCODES a protein that exhibits phosphatidylinositol bisphosphate binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN behavioral response to pain (ortholog); response to heat (ortholog); FOUND IN plasma membrane (ortholog) 9 46528423 46543119 + 30032202 116910163 MODEL JAAIVD010000002;XM_032914022 XP_032769913 phosphoinositide-interacting protein protein-coding 626148087 LOC116900379 olfactory receptor 5D18-like 5 69560994 69561943 - 22301074;30032202 116900379 MODEL JAAIVD010000023;XM_032902127 XP_032758018 protein-coding 626148091 Srsf11 serine and arginine rich splicing factor 11 ENCODES a protein that exhibits identical protein binding (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); myelodysplastic syndrome (ortholog); FOUND IN nuclear speck (ortholog) 3 3550304 3577157 + 22301074;30032202 116896124 MODEL JAAIVD010000012;XM_032897099;XM_032897100;XM_032897101;XM_032897102;XM_032897103;XM_032897104;XM_032897105;XM_032897106 XP_032752990;XP_032752991;XP_032752992;XP_032752993;XP_032752994;XP_032752995;XP_032752996;XP_032752997 serine/arginine-rich splicing factor 11 protein-coding 626148125 Tdrd1 tudor domain containing 1 INVOLVED IN germ cell development (ortholog); piRNA processing (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN chromatoid body (ortholog); cytoplasm (ortholog); P granule (ortholog) 2 59294753 59328929 - 116893842 MODEL JAAIVD010000001;XM_032895561 XP_032751452 tudor domain-containing protein 1 protein-coding 626148153 Smim19 small integral membrane protein 19 13 63953386 63966247 + 116915031 MODEL JAAIVD010000008;XM_032919437;XM_032919438 XP_032775328;XP_032775329 protein-coding 626148164 LOC116893507 60S ribosomal protein L24-like 2 186568182 186568654 + 116893507 MODEL JAAIVD010000001 pseudo 626148165 Cul9 cullin 9 INVOLVED IN microtubule cytoskeleton organization (ortholog); protein ubiquitination (ortholog); regulation of mitotic nuclear division (ortholog); ASSOCIATED WITH imperforate anus (ortholog); FOUND IN cullin-RING ubiquitin ligase complex (ortholog); cytosol (ortholog) 4 83319533 83359506 + 22301074 116899108 MODEL JAAIVD010000003;XM_032900625 XP_032756516 cullin-9 protein-coding 626148209 Efcab5 EF-hand calcium binding domain 5 9 95767350 95864601 - 22301074 116910242 MODEL JAAIVD010000002;XM_032914129 XP_032770020 EF-hand calcium-binding domain-containing protein 5 protein-coding 626148230 Gprasp1 G protein-coupled receptor associated sorting protein 1 INVOLVED IN endosome to lysosome transport (ortholog); G protein-coupled receptor catabolic process (ortholog); FOUND IN cytosol (ortholog) X 87705366 87767764 - 116888849 MODEL JAAIVD010000014;XM_032890117;XM_032890118;XM_032890119;XM_032890120 XP_032746008;XP_032746009;XP_032746010;XP_032746011 G-protein coupled receptor-associated sorting protein 1 protein-coding 626148253 LOC116888002 SNF-related serine/threonine-protein kinase-like X 75736149 75738225 + 116888002 MODEL JAAIVD010000014 pseudo 626148254 LOC116893459 leukocyte immunoglobulin-like receptor subfamily B member 3-like 2 178612833 178613852 + 116893459 MODEL JAAIVD010000001 pseudo 626148255 LOC116909642 uncharacterized LOC116909642 9 72621597 72621949 - 116909642 MODEL JAAIVD010000002;XR_004389087 ncrna 626148259 LOC116898457 ribosome biogenesis regulatory protein homolog 4 100297128 100308581 - 116898457 MODEL JAAIVD010000003 pseudo 626148260 LOC116908323 U6 spliceosomal RNA 8 105449686 105449792 + 116908323 MODEL JAAIVD010000027;XR_004388880 snrna 626148263 LOC116896057 MLV-related proviral Env polyprotein-like 3 203762924 203764711 - 116896057 MODEL JAAIVD010000012 pseudo 626148264 Tek TEK receptor tyrosine kinase ENCODES a protein that exhibits growth factor binding (ortholog); identical protein binding (ortholog); protein tyrosine kinase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); PARTICIPATES IN angiopoietin signaling pathway; ASSOCIATED WITH acute kidney tubular necrosis (ortholog); angiosarcoma (ortholog); arteriovenous malformation (ortholog); FOUND IN actin filament (ortholog); apical plasma membrane (ortholog); basal plasma membrane (ortholog) 1 57802275 57871572 + 22301074;30032202 116891898 MODEL JAAIVD010000025;XM_032893354 XP_032749245 angiopoietin-1 receptor protein-coding 626148285 Mybpc2 myosin binding protein C2 ASSOCIATED WITH Contracture (ortholog) 2 155008687 155032262 + 22301074 116892202 MODEL JAAIVD010000001;XM_032893744 XP_032749635 myosin-binding protein C, fast-type protein-coding 626148316 LOC116906069 dnaJ homolog subfamily B member 6-like 7 57878190 57879038 + 30032202 116906069 MODEL JAAIVD010000026;XM_032909102 XP_032764993 protein-coding 626148320 Rad23b RAD23 nucleotide excision repair protein B ENCODES a protein that exhibits DNA damage sensor activity (ortholog); polyubiquitin modification-dependent protein binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to interleukin-7 (ortholog); DNA damage response (ortholog); embryonic organ development (ortholog); PARTICIPATES IN nucleotide excision repair pathway; ASSOCIATED WITH Craniofacial Abnormalities (ortholog); male infertility (ortholog); Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 96138665 96176842 - 22301074;30032202 116901753 MODEL JAAIVD010000025;XM_032903892 XP_032759783 RAD23 homolog B, nucleotide excision repair protein;UV excision repair protein RAD23 homolog B protein-coding 626148334 Nkx2-2 NK2 homeobox 2 ENCODES a protein that exhibits cis-regulatory region sequence-specific DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN astrocyte differentiation (ortholog); cell development (ortholog); cell differentiation (ortholog); ASSOCIATED WITH demyelinating disease (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 5 126774490 126785360 - 22301074;30032202 116902068 MODEL JAAIVD010000023;XM_032904357 XP_032760248 homeobox protein Nkx-2.2 protein-coding 626148341 LOC116883906 zinc finger protein 614-like 14 76749586 76775019 - 22301074 116883906 MODEL JAAIVD010000009;XM_032885168 XP_032741059 protein-coding 626148348 Ttc1 tetratricopeptide repeat domain 1 ENCODES a protein that exhibits protein-macromolecule adaptor activity (ortholog); INVOLVED IN inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); positive regulation of neuroinflammatory response (ortholog); FOUND IN cytosol (ortholog) 9 26570807 26595328 - 22301074 116908911 MODEL JAAIVD010000002;XM_032912365 XP_032768256 tetratricopeptide repeat protein 1 protein-coding 626148360 LOC116895103 U2 spliceosomal RNA 2 110058157 110058252 + 116895103 MODEL JAAIVD010000001 pseudo 626148361 Tff3 trefoil factor 3 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN regulation of glucose metabolic process (ortholog); response to peptide hormone (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; interleukin-4 signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); Animal Hepatitis (ortholog); colon cancer (ortholog); FOUND IN extracellular region (ortholog); secretory granule (ortholog) 18 2753562 2758554 + 30032202 116887519 MODEL JAAIVD010000013;XM_032889143 XP_032745034 protein-coding 626148368 Vsx1 visual system homeobox 1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN neuron development (ortholog); neuron maturation (ortholog); retinal bipolar neuron differentiation (ortholog); ASSOCIATED WITH Auditory Perceptual Disorders (ortholog); corneal dystrophy (ortholog); Craniofacial Abnormalities (ortholog); FOUND IN nucleus (ortholog) 5 130402507 130408408 - 22301074;30032202 116900688 MODEL JAAIVD010000023;XM_032902390 XP_032758281 protein-coding 626148375 Syce1 synaptonemal complex central element protein 1 ASSOCIATED WITH primary ovarian insufficiency 12 (ortholog); spermatogenic failure 15 (ortholog); FOUND IN central element (ortholog); chromosome (ortholog); synaptonemal complex (ortholog) 2 8710489 8714684 + 22301074;30032202 116890904 MODEL JAAIVD010000001;XM_032891524 XP_032747415 protein-coding 626148389 LOC116909553 olfactory receptor 10-like 9 32141217 32142152 + 22301074 116909553 MODEL JAAIVD010000002;XM_032913171 XP_032769062 protein-coding 626148392 Ppp2r3c protein phosphatase 2 regulatory subunit B''gamma INVOLVED IN B cell homeostasis (ortholog); positive regulation of B cell differentiation (ortholog); regulation of antimicrobial humoral response (ortholog); ASSOCIATED WITH Myoectodermal Gonadal Dysgenesis Syndrome (ortholog); spermatogenic failure 36 (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog); cilium (ortholog) 7 68500356 68524010 - 30032202 116905057 MODEL JAAIVD010000026;XM_032907751 XP_032763642 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma protein-coding 626148410 Rrs1 regulator of ribosome synthesis 1 ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); mitotic metaphase chromosome alignment (ortholog); protein localization to nucleolus (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN condensed nuclear chromosome (ortholog); endoplasmic reticulum (ortholog); nucleolus (ortholog) 1 144290981 144292858 + 22301074;30032202 116903809 MODEL JAAIVD010000025;XM_032906516 XP_032762407 ribosome biogenesis regulator 1 homolog;ribosome biogenesis regulatory protein homolog protein-coding 626148415 LOC116900329 olfactory receptor 10AG1-like 5 64540895 64541782 + 22301074 116900329 MODEL JAAIVD010000023;XM_032902086 XP_032757977 protein-coding 626148418 Trmt2a tRNA methyltransferase 2A ENCODES a protein that exhibits C-methyltransferase activity (ortholog); tRNA (uracil(54)-C5)-methyltransferase activity, S-adenosyl methionine-dependent (ortholog) 4 3516632 3521388 + 22301074 116898668 MODEL JAAIVD010000003;XM_032899905 XP_032755796 tRNA (uracil-5-)-methyltransferase homolog A;tRNA methyltransferase 2 homolog A protein-coding 626148434 Adra1a adrenoceptor alpha 1A ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); adult heart development (ortholog); cell growth involved in cardiac muscle cell development (ortholog); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); bladder neck obstruction (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dopaminergic synapse (ortholog) 12 57758240 57852811 - 22301074;30032202 116913598 MODEL JAAIVD010000007;XM_032917848;XM_032917849 XP_032773739;XP_032773740 alpha-1A adrenergic receptor protein-coding 626148444 Tmem86a transmembrane protein 86A ENCODES a protein that exhibits alkenylglycerophosphocholine hydrolase activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 2 152320374 152324438 - 22301074;30032202 116892089 MODEL JAAIVD010000001;XM_032893564 XP_032749455 lysoplasmalogenase-like protein TMEM86A protein-coding 626148451 LOC116906318 U6 spliceosomal RNA 7 101544712 101544811 + 116906318 MODEL JAAIVD010000026 pseudo 626148452 LOC116899019 protein tyrosine phosphatase type IVA 1-like 4 55138582 55139161 + 116899019 MODEL JAAIVD010000003 pseudo 626148453 Fabp6 fatty acid binding protein 6 ENCODES a protein that exhibits fatty acid binding (ortholog); INVOLVED IN steroid metabolic process (ortholog) 9 26411532 26416573 - 30032202 116909980 MODEL JAAIVD010000002;XM_032913763 XP_032769654 gastrotropin protein-coding 626148461 Usp51 ubiquitin specific peptidase 51 ENCODES a protein that exhibits chromatin binding (ortholog); cysteine-type deubiquitinase activity (ortholog); histone binding (ortholog); INVOLVED IN DNA damage response (ortholog); DNA repair-dependent chromatin remodeling (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH Dwarfism (ortholog) X 18238867 18241144 + 22301074 116888586 MODEL JAAIVD010000014;XM_032889888 XP_032745779 ubiquitin carboxyl-terminal hydrolase 51 protein-coding 626148466 LOC116906329 U6 spliceosomal RNA 7 68359389 68359499 + 116906329 MODEL JAAIVD010000026;XR_004388616 snrna 626148469 LOC116906703 zinc finger protein 878-like 1 157300646 157312654 - 30032202 116906703 MODEL JAAIVD010000025;XM_032909506;XM_032909514;XM_032909521 XP_032765397;XP_032765405;XP_032765412 zinc finger protein 124-like;zinc finger protein 709-like protein-coding 626148484 LOC116907045 elongation factor 1-alpha 1-like 8 46343553 46345390 - 116907045 MODEL JAAIVD010000027 pseudo 626148485 LOC116893585 cuticle collagen 1-like 2 229360505 229380141 + 116893585 MODEL JAAIVD010000001;XM_032895284 XP_032751175 protein-coding 626148491 Pwwp2a PWWP domain containing 2A ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H3K36me3 reader activity (ortholog); INVOLVED IN chromatin remodeling (ortholog); positive regulation of transcription elongation by RNA polymerase II (ortholog); regulation of transcriptional start site selection at RNA polymerase II promoter (ortholog); FOUND IN nucleus (ortholog) 9 26524196 26563706 + 30032202 116910583 MODEL JAAIVD010000002;XM_032914506 XP_032770397 PWWP domain-containing protein 2A protein-coding 626148499 Ntng2 netrin G2 INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic specialization assembly (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); Developmental Disabilities (ortholog); genetic disease (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog) 5 7453001 7510537 + 116901219 MODEL JAAIVD010000023;XM_032902937;XM_032902938;XM_032902940;XM_032902941;XM_032902942;XM_032902943 XP_032758828;XP_032758829;XP_032758831;XP_032758832;XP_032758833;XP_032758834 netrin-G2 protein-coding 626148524 LOC116913045 U6 spliceosomal RNA 11 65521672 65521778 - 116913045 MODEL JAAIVD010000006;XR_004389580 snrna 626148527 Bcl7c BAF chromatin remodeling complex subunit BCL7C ASSOCIATED WITH Ependymomas (ortholog); FOUND IN SWI/SNF complex (ortholog) 2 74191356 74238533 + 116891463 MODEL JAAIVD010000001;XM_032892547;XM_032892548;XM_032892549;XM_032892551;XM_032892552 XP_032748438;XP_032748439;XP_032748440;XP_032748442;XP_032748443 B-cell CLL/lymphoma 7 protein family member C protein-coding 626148555 Pln phospholamban ENCODES a protein that exhibits ATPase inhibitor activity (ortholog); identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acrosome assembly (ortholog); adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process (ortholog); calcium ion transport (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); cardiomyopathy (ortholog); centronuclear myopathy (ortholog); FOUND IN calcium ion-transporting ATPase complex (ortholog); endoplasmic reticulum membrane (ortholog); membrane (ortholog) 18 30255047 30257188 + 22301074;30032202 116886845 MODEL JAAIVD010000013;XM_032888298 XP_032744189 cardiac phospholamban protein-coding 626148560 Trnai-uau transfer RNA isoleucine (anticodon UAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889699 MODEL JAAIVD010000052 trna 626148561 Smarcal1 SNF2 related chromatin remodeling annealing helicase 1 ENCODES a protein that exhibits ATP-dependent activity, acting on DNA (ortholog); ATP-dependent DNA/DNA annealing activity (ortholog); INVOLVED IN DNA damage response (ortholog); double-strand break repair via nonhomologous end joining (ortholog); regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH atrioventricular septal defect (ortholog); atypical hemolytic-uremic syndrome (ortholog); Dwarfism (ortholog); FOUND IN DNA replication factor A complex (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 146171462 146219069 + 22301074;30032202 116899487 MODEL JAAIVD010000003;XM_032901319 XP_032757210 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1;SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 protein-coding 626148583 Rmnd1 required for meiotic nuclear division 1 homolog INVOLVED IN positive regulation of mitochondrial translation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); combined oxidative phosphorylation deficiency 11 (ortholog); genetic disease (ortholog); FOUND IN mitochondrion (ortholog) 2 199175297 199209206 - 30032202 116892891 MODEL JAAIVD010000001;XM_032894800 XP_032750691 required for meiotic nuclear division protein 1 homolog protein-coding 626148599 Apc2 APC regulator of WNT signaling pathway 2 ENCODES a protein that exhibits beta-catenin binding (ortholog); INVOLVED IN activation of GTPase activity (ortholog); microtubule cytoskeleton organization (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); autosomal recessive intellectual developmental disorder 74 (ortholog); Breast Neoplasms (ortholog); FOUND IN actin filament (ortholog); catenin complex (ortholog); cytoplasm (ortholog) 1 154563137 154584865 - 22301074;30032202 116905178 MODEL JAAIVD010000025;XM_032907963;XM_032907972;XM_032907980;XM_032907989;XM_032907997;XM_032908006;XM_032908015;XM_032908023 XP_032763854;XP_032763863;XP_032763871;XP_032763880;XP_032763888;XP_032763897;XP_032763906;XP_032763914 adenomatous polyposis coli protein 2 protein-coding 626148635 Ss18 SS18 subunit of BAF chromatin remodeling complex ENCODES a protein that exhibits transcription coactivator activity (ortholog); INVOLVED IN cell morphogenesis (ortholog); cytoskeleton organization (ortholog); ephrin receptor signaling pathway (ortholog); ASSOCIATED WITH synovial sarcoma (ortholog); FOUND IN microtubule cytoskeleton (ortholog); npBAF complex (ortholog); SWI/SNF complex (ortholog) 15 29089280 29151447 + 30032202 116884458 MODEL JAAIVD010000010;XM_032885557;XM_032885558;XM_032885559 XP_032741448;XP_032741449;XP_032741450 protein SSXT protein-coding 626148656 LOC116906085 60S ribosomal protein L10a-like 7 68622413 68623638 + 116906085 MODEL JAAIVD010000026 pseudo 626148657 LOC116889933 olfactory receptor 6C6-like 1 161054252 161055190 + 116889933 MODEL JAAIVD010000025 pseudo 626148658 LOC116903046 taste receptor type 2 member 116 6 15806352 15807326 + 22301074;30032202 116903046 MODEL JAAIVD010000024;XM_032905347 XP_032761238 protein-coding 626148661 C1H1orf50 chromosome 1 C1orf50 homolog ENCODES a protein that exhibits identical protein binding (ortholog) 1 37721457 37725915 + 116897704 MODEL JAAIVD010000025;XM_032899161 XP_032755052 uncharacterized protein C1orf50 homolog protein-coding 626148670 Cacng8 calcium voltage-gated channel auxiliary subunit gamma 8 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ionotropic glutamate receptor binding (ortholog); protein phosphatase 2B binding (ortholog); INVOLVED IN positive regulation of AMPA receptor activity (ortholog); regulation of AMPA receptor activity (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); ASSOCIATED WITH antisocial personality disorder (ortholog); dilated cardiomyopathy (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); dendrite membrane (ortholog); glutamatergic synapse (ortholog) 2 178028343 178050397 + 22301074;30032202 116893451 MODEL JAAIVD010000001;XM_032895216 XP_032751107 voltage-dependent calcium channel gamma-8 subunit protein-coding 626148678 LOC116911748 60S ribosomal protein L27a-like 10 64331498 64331827 - 30032202 116911748 MODEL JAAIVD010000005;XM_032915740 XP_032771631 protein-coding 626148681 Stard4 StAR related lipid transfer domain containing 4 ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cholesterol import (ortholog); cholesterol transport involved in cholesterol storage (ortholog); intracellular cholesterol transport (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 15 11076586 11088084 + 30032202 116884625 MODEL JAAIVD010000010;XM_032885764 XP_032741655 stAR-related lipid transfer protein 4 protein-coding 626148691 LOC116897721 E3 ubiquitin-protein ligase RNF138-like 4 21928025 21928707 - 116897721 MODEL JAAIVD010000003 pseudo 626148692 LOC116914333 zinc finger protein 148-like 13 48062731 48072106 - 116914333 MODEL JAAIVD010000008 pseudo 626148693 Fkbp10 FKBP prolyl isomerase 10 ENCODES a protein that exhibits FK506 binding (ortholog); peptidyl-prolyl cis-trans isomerase activity (ortholog); INVOLVED IN aorta morphogenesis (ortholog); collagen fibril organization (ortholog); extracellular matrix assembly (ortholog); ASSOCIATED WITH Bruck syndrome (ortholog); Bruck Syndrome 1 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog); mitochondrial intermembrane space (ortholog) 9 59718301 59727691 + 22301074 116909792 MODEL JAAIVD010000002;XM_032913488 XP_032769379 peptidyl-prolyl cis-trans isomerase FKBP10 protein-coding 626148707 LOC116890767 ADP/ATP translocase 2-like 2 3152056 3153243 + 116890767 MODEL JAAIVD010000001 pseudo 626148708 LOC116902639 U2 spliceosomal RNA 5 147763596 147763804 + 116902639 MODEL JAAIVD010000023 pseudo 626148709 LOC116906927 uncharacterized LOC116906927 1 156777445 156778796 - 116906927 MODEL JAAIVD010000025;XR_004388783 ncrna 626148713 LOC116907809 ADP/ATP translocase 2-like 8 69999183 70000076 - 116907809 MODEL JAAIVD010000027 pseudo 626148714 Aif1 allograft inflammatory factor 1 ENCODES a protein that exhibits actin filament binding (ortholog); calcium ion binding (ortholog); INVOLVED IN actin crosslink formation (ortholog); actin filament bundle assembly (ortholog); actin filament polymerization (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); Alcohol-Induced Disorders, Nervous System (ortholog); Alzheimer's disease (ortholog); FOUND IN actin filament (ortholog); cell projection (ortholog); cytoplasm (ortholog) 18 7768872 7770527 - 22301074;30032202 116887041 MODEL JAAIVD010000013;XM_032888533 XP_032744424 protein-coding 626148724 Ercc5 ERCC excision repair 5, endonuclease ENCODES a protein that exhibits bubble DNA binding (ortholog); damaged DNA binding (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN base-excision repair, AP site formation (ortholog); determination of adult lifespan (ortholog); DNA repair (ortholog); PARTICIPATES IN altered nucleotide excision repair pathway; nucleotide excision repair pathway; RNA polymerase II transcription initiation pathway; ASSOCIATED WITH cerebrooculofacioskeletal syndrome 3 (ortholog); Cockayne syndrome (ortholog); Colorectal Neoplasms (ortholog); FOUND IN DNA replication factor A complex (ortholog); nucleotide-excision repair complex (ortholog); nucleus (ortholog) 4 120218325 120271550 + 22301074;30032202 116899349 MODEL JAAIVD010000003;XM_032901044 XP_032756935 DNA repair protein complementing XP-G cells protein-coding 626148743 Gata6 GATA binding protein 6 ENCODES a protein that exhibits chromatin binding (ortholog); cis-regulatory region sequence-specific DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN animal organ formation (ortholog); cardiac muscle cell differentiation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); ASSOCIATED WITH atrial heart septal defect 9 (ortholog); atrioventricular septal defect (ortholog); Atrioventricular Septal Defect 5 (ortholog); FOUND IN nuclear membrane (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 32987436 33019773 - 22301074;30032202 116884571 MODEL JAAIVD010000010;XM_032885715 XP_032741606 transcription factor GATA-6 protein-coding 626148754 LOC116887306 olfactory receptor 10C1-like 18 10600368 10610979 + 22301074 116887306 MODEL JAAIVD010000013;XM_032888886 XP_032744777 protein-coding 626148758 LOC116897757 SNW domain-containing protein 1-like 4 5989679 6010463 - 116897757 MODEL JAAIVD010000003 pseudo 626148759 LOC116888435 uncharacterized LOC116888435 X 116429113 116431419 + 116888435 MODEL JAAIVD010000014 pseudo 626148760 LOC116888878 melanoma-associated antigen B16 X 37940986 37966191 + 30032202 116888878 MODEL JAAIVD010000014;XM_032890144 XP_032746035 protein-coding 626148767 Mrps26 mitochondrial ribosomal protein S26 FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog) 5 110300478 110302137 + 22301074;30032202 116901969 MODEL JAAIVD010000023;XM_032904209 XP_032760100 28S ribosomal protein S26, mitochondrial protein-coding 626148775 LOC116895970 BMP/retinoic acid-inducible neural-specific protein 1-like 3 152005132 152029103 + 116895970 MODEL JAAIVD010000012 pseudo 626148776 Dync1i1 dynein cytoplasmic 1 intermediate chain 1 ENCODES a protein that exhibits dynein light chain binding (ortholog); microtubule binding (ortholog); microtubule motor activity (ortholog); INVOLVED IN intracellular transport of virus (ortholog); vesicle transport along microtubule (ortholog); PARTICIPATES IN mitochondria transport pathway; ASSOCIATED WITH peripheral nervous system disease (ortholog); FOUND IN axon cytoplasm (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) 6 132611294 132731099 - 30032202 116904094 MODEL JAAIVD010000024;XM_032906963 XP_032762854 cytoplasmic dynein 1 intermediate chain 1 protein-coding 626148791 Camk1 calcium/calmodulin dependent protein kinase I ENCODES a protein that exhibits calcium/calmodulin-dependent protein kinase activity (ortholog); INVOLVED IN intracellular signal transduction (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of dendritic spine development (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic density (ortholog) 6 33191475 33202030 + 22301074;30032202 116903419 MODEL JAAIVD010000024;XM_032905943;XM_032905944;XM_032905945 XP_032761834;XP_032761835;XP_032761836 calcium/calmodulin-dependent protein kinase type 1 protein-coding 626148814 LOC116906561 proteasome subunit beta type-4-like 8 91703312 91704067 + 116906561 MODEL JAAIVD010000027 pseudo 626148815 LOC116895541 TD and POZ domain-containing protein 1-like 3 120987939 120988925 - 30032202 116895541 MODEL JAAIVD010000012;XM_032896784 XP_032752675 protein-coding 626148818 LOC116895351 heterogeneous nuclear ribonucleoprotein R-like 3 46275800 46277395 + 116895351 MODEL JAAIVD010000012 pseudo 626148819 Doc2a double C2 domain alpha INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); regulation of calcium ion-dependent exocytosis (ortholog); spontaneous neurotransmitter secretion (ortholog); FOUND IN extrinsic component of synaptic vesicle membrane (ortholog); glutamatergic synapse (ortholog); lysosome (ortholog) 2 75043499 75048771 - 22301074 116891501 MODEL JAAIVD010000001;XM_032892621;XM_032892622;XM_032892623;XM_032892625;XM_032892626;XM_032892627;XM_032892628;XM_032892629 XP_032748512;XP_032748513;XP_032748514;XP_032748516;XP_032748517;XP_032748518;XP_032748519;XP_032748520 double C2-like domain-containing protein alpha protein-coding 626148854 LOC116900607 elongation factor 2-like 5 101274722 101277260 - 116900607 MODEL JAAIVD010000023 pseudo 626148855 Kcna4 potassium voltage-gated channel subfamily A member 4 ENCODES a protein that exhibits monoatomic ion channel activity (ortholog); potassium channel activity (ortholog); voltage-gated monoatomic ion channel activity involved in regulation of presynaptic membrane potential (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Microcephaly, Cataracts, Impaired Intellectual Development, and Dystonia with Abnormal Striatum (ortholog); FOUND IN asymmetric synapse (ortholog); axon (ortholog); axon initial segment (ortholog) 5 85182045 85189482 + 22301074;2555158;30032202 116901721 MODEL JAAIVD010000023;X16002;XM_032903855 CAA34133;XP_032759746 protein-coding 626148861 LOC116893277 ADP/ATP translocase 2-like 2 144604660 144605754 + 116893277 MODEL JAAIVD010000001 pseudo 626148862 LOC116910947 exosome complex component CSL4-like 10 79703812 79704172 + 116910947 MODEL JAAIVD010000005 pseudo 626148863 LOC116905284 U6 snRNA-associated Sm-like protein LSm5 7 99113431 99115585 + 22301074;30032202 116905284 MODEL JAAIVD010000026;XM_032908145 XP_032764036 protein-coding 626148869 LOC116914915 elongation factor Tu, mitochondrial-like 13 51272788 51274476 + 116914915 MODEL JAAIVD010000008 pseudo 626148870 LOC116900930 low-density lipoprotein receptor class A domain-containing protein 3-like 5 79788916 79798171 - 116900930 MODEL JAAIVD010000023;XM_032902577 XP_032758468 protein-coding 626148876 Gtf2i general transcription factor IIi ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); mitogen-activated protein kinase binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN negative regulation of angiogenesis (ortholog); negative regulation of cytosolic calcium ion concentration (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); atrial fibrillation (ortholog); autism spectrum disorder (ortholog); FOUND IN cell projection (ortholog); neuronal cell body (ortholog); nucleoplasm (ortholog) 16 19740660 19812779 + 22301074;30032202 116885122 MODEL JAAIVD010000004;XM_032886275 XP_032742166 general transcription factor II-I protein-coding 626148915 LOC116892416 zinc finger protein 60-like 2 168222320 168241023 - 30032202 116892416 MODEL JAAIVD010000001;XM_032894097 XP_032749988 protein-coding 626148925 Clock clock circadian regulator ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to ionizing radiation (ortholog); circadian regulation of gene expression (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol withdrawal syndrome (ortholog); FOUND IN chromatoid body (ortholog); chromosome (ortholog); CLOCK-BMAL transcription complex (ortholog) 11 32957145 33002260 - 22301074;30032202 116912651 MODEL JAAIVD010000006;XM_032916768;XM_032916769;XM_032916770 XP_032772659;XP_032772660;XP_032772661 circadian locomoter output cycles protein kaput protein-coding 626148954 LOC116895728 melanoma antigen preferentially expressed in tumors-like 3 223297802 223301878 + 30032202 116895728 MODEL JAAIVD010000012;XM_032896909 XP_032752800 protein-coding 626148960 Tmc4 transmembrane channel like 4 ENCODES a protein that exhibits voltage-gated chloride channel activity (ortholog); INVOLVED IN sensory perception of salty taste (ortholog) 2 178255488 178267588 - 30032202 116892700 MODEL JAAIVD010000001;XM_032894561 XP_032750452 transmembrane channel-like protein 4 protein-coding 626148979 Trim59 tripartite motif containing 59 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN host-mediated suppression of symbiont invasion (ortholog); innate immune response (ortholog); negative regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN endoplasmic reticulum (ortholog) 3 86263717 86275352 + 22301074;30032202 116896795 MODEL JAAIVD010000012;XM_032898264;XM_032898265 XP_032754155;XP_032754156 tripartite motif-containing protein 59 protein-coding 626148989 Igf2bp3 insulin like growth factor 2 mRNA binding protein 3 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); N6-methyladenosine-containing RNA reader activity (ortholog); INVOLVED IN CRD-mediated mRNA stabilization (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); malignant mesothelioma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 6 91760402 91891168 + 30032202 116903836 MODEL JAAIVD010000024;XM_032906553 XP_032762444 insulin-like growth factor 2 mRNA-binding protein 3 protein-coding 626149008 LOC116890245 serine/threonine-protein kinase Nek10-like 1 44628862 44693815 + 22301074 116890245 MODEL JAAIVD010000025;XM_032890993 XP_032746884 protein-coding 626149024 LOC116887448 rano class II histocompatibility antigen, D-1 beta chain 18 7907931 7917460 - 22301074;30032202 116887448 MODEL JAAIVD010000013;XM_032889057 XP_032744948 protein-coding 626149034 Muc20 mucin 20, cell surface associated ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN hepatocyte growth factor receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); IgA glomerulonephritis (ortholog); lupus nephritis (ortholog); FOUND IN basal plasma membrane (ortholog) 4 17586418 17603959 - 30032202 116898781 MODEL JAAIVD010000003;XM_032900118 XP_032756009 mucin-20 protein-coding 626149042 Rarb retinoic acid receptor beta ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); heterocyclic compound binding (ortholog); nuclear receptor activity (ortholog); INVOLVED IN bone development (ortholog); embryonic digestive tract development (ortholog); embryonic eye morphogenesis (ortholog); PARTICIPATES IN retinoic acid signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); asbestos-related lung carcinoma (ortholog); autism spectrum disorder (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 12 85777108 86110751 - 22301074;30032202 116913834 MODEL JAAIVD010000007;XM_032918146;XM_032918147 XP_032774037;XP_032774038 protein-coding 626149057 Slc29a4 solute carrier family 29 member 4 ENCODES a protein that exhibits efflux transmembrane transporter activity (ortholog); monoamine transmembrane transporter activity (ortholog); monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN adenosine transport (ortholog); cellular detoxification (ortholog); dopamine transport (ortholog); PARTICIPATES IN metformin pharmacokinetics pathway; FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 16 10421977 10452855 - 22301074;30032202 116885574 MODEL JAAIVD010000004;XM_032886869;XM_032886870 XP_032742760;XP_032742761 equilibrative nucleoside transporter 4 protein-coding 626149077 LOC116911827 small nucleolar RNA SNORA17 10 27629336 27629467 - 116911827 MODEL JAAIVD010000005;XR_004389363 snorna 626149080 LOC116914319 disintegrin and metalloproteinase domain-containing protein 26A-like 13 44110211 44112613 + 22301074;30032202 116914319 MODEL JAAIVD010000008;XM_032918552 XP_032774443 protein-coding 626149083 LOC116898484 dnaJ homolog subfamily C member 14-like 4 120070575 120094902 + 116898484 MODEL JAAIVD010000003 pseudo 626149084 LOC116896780 uncharacterized LOC116896780 3 80215570 80263778 - 116896780 MODEL JAAIVD010000012;XR_004387366 ncrna 626149089 LOC116893167 olfactory receptor 51A4-like 2 102942562 102944655 - 116893167 MODEL JAAIVD010000001 pseudo 626149090 Rcbtb2 RCC1 and BTB domain containing protein 2 INVOLVED IN cell population proliferation (ortholog); digestive tract development (ortholog); liver development (ortholog); ASSOCIATED WITH malignant histiocytic disease (ortholog); mitochondrial DNA depletion syndrome 5 (ortholog); FOUND IN acrosomal vesicle (ortholog) 12 51222820 51243309 - 22301074 116913385 MODEL JAAIVD010000007;XM_032917564 XP_032773455 RCC1 and BTB domain-containing protein 2 protein-coding 626149105 Dus2 dihydrouridine synthase 2 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); FMN binding (ortholog); NADPH binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); tRNA dihydrouridine synthesis (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog) 17 25757405 25798441 + 22301074;30032202 116886262 MODEL JAAIVD010000011;XM_032887684 XP_032743575 tRNA-dihydrouridine(20) synthase [NAD(P)+]-like protein-coding 626149125 Homer1 homer scaffold protein 1 ENCODES a protein that exhibits G protein-coupled glutamate receptor binding (ortholog); identical protein binding (ortholog); molecular adaptor activity (ortholog); INVOLVED IN behavioral response to cocaine (ortholog); cellular response to L-glutamate (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH anxiety disorder (ortholog); cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN apical part of cell (ortholog); axon (ortholog); costamere (ortholog) 3 202935219 203039056 - 22301074;30032202 116897292 MODEL JAAIVD010000012;XM_032899024 XP_032754915 homer protein homolog 1 protein-coding 626149139 LOC116895600 60S ribosomal protein L9-like 3 154744058 154744633 + 116895600 MODEL JAAIVD010000012 pseudo 626149140 LOC116892629 vomeronasal type-1 receptor 1-like 2 174105336 174106232 - 22301074;30032202 116892629 MODEL JAAIVD010000001;XM_032894448 XP_032750339 protein-coding 626149143 Stam2 signal transducing adaptor molecule 2 PARTICIPATES IN interleukin-2 signaling pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 5 30471213 30519145 - 22301074;30032202 116901408 MODEL JAAIVD010000023;XM_032903287 XP_032759178 signal transducing adapter molecule 2 protein-coding 626149161 C2H11orf24 chromosome 2 C11orf24 homolog FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 2 3956312 3965018 - 30032202 116890806 MODEL JAAIVD010000001;XM_032891290 XP_032747181 uncharacterized protein C11orf24 homolog protein-coding 626149170 Phf12 PHD finger protein 12 ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); transcription corepressor activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Developmental Disease (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); Sin3-type complex (ortholog) 9 96663711 96709702 + 22301074;30032202 116908530 MODEL JAAIVD010000002;XM_032911712;XM_032911713;XR_004388993 XP_032767603;XP_032767604 protein-coding 626149198 LOC116894894 U6 spliceosomal RNA 2 41089336 41089434 + 116894894 MODEL JAAIVD010000001 pseudo 626149199 Rpusd4 RNA pseudouridine synthase D4 ENCODES a protein that exhibits mitochondrial ribosomal large subunit rRNA binding (ortholog); pseudouridine synthase activity (ortholog); tRNA binding (ortholog); INVOLVED IN mitochondrial tRNA pseudouridine synthesis (ortholog); mRNA pseudouridine synthesis (ortholog); positive regulation of mitochondrial translation (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 8 30819271 30826897 + 22301074 116907544 MODEL JAAIVD010000027;XM_032910568 XP_032766459 mitochondrial RNA pseudouridine synthase RPUSD4 protein-coding 626149210 LOC116889825 kinesin-like protein KIF21B 22301074;30032202 116889825 MODEL JAAIVD010001350;XM_032890662 XP_032746553 protein-coding 626149211 Sh2d3c SH2 domain containing 3C FOUND IN cytosol (ortholog) 5 2883392 2914307 - 22301074;30032202 116901131 MODEL JAAIVD010000023;XM_032902724;XM_032902726;XM_032902727;XM_032902728;XM_032902729 XP_032758615;XP_032758617;XP_032758618;XP_032758619;XP_032758620 SH2 domain-containing protein 3C protein-coding 626149237 Ogdh oxoglutarate dehydrogenase ENCODES a protein that exhibits heat shock protein binding (ortholog); oxoglutarate dehydrogenase (succinyl-transferring) activity (ortholog); protein-folding chaperone binding (ortholog); INVOLVED IN 2-oxoglutarate decarboxylation to succinyl-CoA (ortholog); 2-oxoglutarate metabolic process (ortholog); cerebellar cortex development (ortholog); PARTICIPATES IN citric acid cycle pathway; fumaric aciduria pathway; mitochondrial complex II deficiency pathway; ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); oxoglutarate dehydrogenase deficiency (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog); nucleus (ortholog) 11 75216281 75282353 + 22301074;30032202 116912803 MODEL JAAIVD010000006;XM_032916969 XP_032772860 2-oxoglutarate dehydrogenase, mitochondrial protein-coding 626149266 Trnae-uuc transfer RNA glutamic acid (anticodon UUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60895035 60895106 - 116897689 MODEL JAAIVD010000012 trna 626149267 LOC116897769 E3 ubiquitin-protein ligase CCNB1IP1-like 4 7863090 7864069 + 116897769 MODEL JAAIVD010000003 pseudo 626149268 LOC116911819 small nucleolar RNA SNORA48 10 42709015 42709153 - 116911819 MODEL JAAIVD010000005;XR_004389357 snorna 626149271 LOC116886156 ATP-dependent RNA helicase DDX19B-like 17 30702102 30723714 - 22301074;30032202 116886156 MODEL JAAIVD010000011;XM_032887523 XP_032743414 protein-coding 626149287 Pou4f2 POU class 4 homeobox 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axonogenesis (ortholog); PARTICIPATES IN p53 signaling pathway; FOUND IN cytoplasm (ortholog); euchromatin (ortholog); nuclear speck (ortholog) 17 21669599 21673236 + 22301074;30032202 116886416 MODEL JAAIVD010000011;XM_032887896 XP_032743787 POU domain, class 4, transcription factor 2 protein-coding 626149293 LOC116893192 receptor of activated protein C kinase 1-like 2 104976751 104980609 + 116893192 MODEL JAAIVD010000001 pseudo 626149294 Rsbn1 round spermatid basic protein 1 ENCODES a protein that exhibits histone H4K20 demethylase activity (ortholog); FOUND IN nucleus (ortholog) 3 54113863 54162647 - 30032202 116896436 MODEL JAAIVD010000012;XM_032897587 XP_032753478 lysine-specific demethylase 9 protein-coding 626149305 LOC116909640 developmental pluripotency-associated protein 5A-like 9 1184310 1184786 + 116909640 MODEL JAAIVD010000002 pseudo 626149306 B4galnt2 beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group) ENCODES a protein that exhibits acetylgalactosaminyltransferase activity (ortholog); INVOLVED IN negative regulation of cell-cell adhesion (ortholog); protein glycosylation (ortholog); protein import (ortholog); ASSOCIATED WITH Sd(a) POLYAGGLUTINATION SYNDROME (ortholog) 9 58478929 58528968 + 22301074;30032202 116908843 MODEL JAAIVD010000002;XM_032912266 XP_032768157 beta-1,4 N-acetylgalactosaminyltransferase 2 protein-coding 626149321 LOC116889647 uncharacterized protein MG377-like 22301074 116889647 MODEL JAAIVD010000041;XM_032890552 XP_032746443 protein-coding 626149322 Nras NRAS proto-oncogene, GTPase ENCODES a protein that exhibits GTPase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN defense response to protozoan (ortholog); myoblast differentiation (ortholog); negative regulation of skeletal muscle tissue development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; epidermal growth factor/neuregulin signaling pathway; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN Golgi apparatus (ortholog); membrane (ortholog) 3 54968578 54979405 - 22301074;30032202 116896453 MODEL JAAIVD010000012;XM_032897610 XP_032753501 GTPase NRas protein-coding 626149333 Patz1 POZ/BTB and AT hook containing zinc finger 1 ENCODES a protein that exhibits chromatin binding (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN male gonad development (ortholog); negative regulation of endothelial cell migration (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Ependymomas (ortholog); FOUND IN male germ cell nucleus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 11 72276333 72294578 + 22301074;30032202 116912851 MODEL JAAIVD010000006;XM_032917064;XM_032917065;XM_032917066;XM_032917067;XM_032917068 XP_032772955;XP_032772956;XP_032772957;XP_032772958;XP_032772959 POZ-, AT hook-, and zinc finger-containing protein 1 protein-coding 626149354 LOC116885512 uncharacterized LOC116885512 16 42402317 42403604 - 116885512 MODEL JAAIVD010000004;XR_004386012 ncrna 626149360 Rnd3 Rho family GTPase 3 ASSOCIATED WITH hepatocellular carcinoma (ortholog) 5 28953305 28971678 - 22301074;30032202 116901400 MODEL JAAIVD010000023;XM_032903275 XP_032759166 rho-related GTP-binding protein RhoE protein-coding 626149369 LOC116904333 uncharacterized LOC116904333 6 65668153 65702736 + 116904333 MODEL JAAIVD010000024 pseudo 626149370 LOC116889022 interleukin enhancer-binding factor 3-like X 16786203 16788980 - 116889022 MODEL JAAIVD010000014 pseudo 626149371 LOC116898218 uncharacterized LOC116898218 4 147081361 147082331 + 116898218 MODEL JAAIVD010000003;XR_004387645 ncrna 626149375 LOC116904574 uncharacterized LOC116904574 6 19274837 19275374 + 116904574 MODEL JAAIVD010000024;XR_004388343 ncrna 626149379 Aqp4 aquaporin 4 ENCODES a protein that exhibits identical protein binding (ortholog); water channel activity (ortholog); INVOLVED IN carbon dioxide transport (ortholog); cell-cell adhesion (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH Alpers-Huttenlocher syndrome (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN astrocyte end-foot (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 15 28473674 28490121 + 22301074;30032202 116884498 MODEL JAAIVD010000010;XM_032885625;XM_032885626;XM_032885627 XP_032741516;XP_032741517;XP_032741518 aquaporin-4 protein-coding 626149396 Muc5b mucin 5B, oligomeric mucus/gel-forming INVOLVED IN defense response to bacterium (ortholog); regulation of macrophage activation (ortholog); ASSOCIATED WITH antisynthetase syndrome (ortholog); asthma (ortholog); bronchiolitis (ortholog); FOUND IN extracellular space (ortholog) 2 7656743 7687845 - 22301074;30032202 116890857 MODEL JAAIVD010000001;XM_032891422 XP_032747313 mucin-5B protein-coding 626149448 LOC116902332 EKC/KEOPS complex subunit Tp53rk-like 5 152472898 152475258 + 22301074;30032202 116902332 MODEL JAAIVD010000023;XM_032904806 XP_032760697 protein-coding 626149454 Kmt2b lysine methyltransferase 2B ENCODES a protein that exhibits histone H3K4 methyltransferase activity (ortholog); unmethylated CpG binding (ortholog); zinc ion binding (ortholog); INVOLVED IN DNA methylation-dependent constitutive heterochromatin formation (ortholog); maternal-to-zygotic transition of gene expression (ortholog); oocyte development (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog); FOUND IN histone methyltransferase complex (ortholog); MLL1/2 complex (ortholog); nucleus (ortholog) 2 165422246 165441834 + 22301074;30032202 116892308 MODEL JAAIVD010000001;XM_032893926 XP_032749817 histone-lysine N-methyltransferase 2B protein-coding 626149494 Filip1 filamin A interacting protein 1 INVOLVED IN cerebral cortex development (ortholog); corpus callosum development (ortholog); modification of postsynaptic structure (ortholog); ASSOCIATED WITH NEUROMUSCULAR DISORDER, CONGENITAL, WITH DYSMORPHIC FACIES (ortholog); Osteoarthritis, Hip (ortholog); Stomach Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); glutamatergic synapse (ortholog); nucleolus (ortholog) 8 74075975 74230163 - 116907381 MODEL JAAIVD010000027;XM_032910334;XM_032910335 XP_032766225;XP_032766226 filamin-A-interacting protein 1 protein-coding 626149510 LOC116893787 40S ribosomal protein S12-like 2 35994217 35994598 - 116893787 MODEL JAAIVD010000001 pseudo 626149511 LOC116912942 U7 small nuclear RNA 11 76714441 76714502 - 116912942 MODEL JAAIVD010000006;XR_004389510 snrna 626149514 LOC116908276 CDK2-associated and cullin domain-containing protein 1-like 8 114972263 114974496 + 116908276 MODEL JAAIVD010000027 pseudo 626149515 LOC116884067 small nucleolar RNA SNORA48 14 41482192 41482332 + 116884067 MODEL JAAIVD010000009;XR_004385815 snorna 626149518 Rgs22 regulator of G protein signaling 22 ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 209557327 209661911 - 30032202 116884391 MODEL JAAIVD010000025;XM_032885513 XP_032741404 regulator of G-protein signaling 22 protein-coding 626149548 LOC116895697 histone H2A.Z-like 3 209719900 209720276 + 116895697 MODEL JAAIVD010000012 pseudo 626149549 Dclk3 doublecortin like kinase 3 ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN negative regulation of protein localization to nucleus (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 102410805 102463371 + 22301074 116907726 MODEL JAAIVD010000027;XM_032910852 XP_032766743 serine/threonine-protein kinase DCLK3 protein-coding 626149558 Zmynd12 zinc finger MYND-type containing 12 INVOLVED IN flagellated sperm motility (ortholog); sperm axoneme assembly (ortholog); FOUND IN sperm flagellum (ortholog) 1 37507026 37539710 - 22301074 116897462 MODEL JAAIVD010000025;XM_032899136 XP_032755027 zinc finger MYND domain-containing protein 12 protein-coding 626149570 Dscc1 DNA replication and sister chromatid cohesion 1 ENCODES a protein that exhibits DNA clamp loader activity (ortholog); single-stranded DNA helicase activity (ortholog); INVOLVED IN maintenance of mitotic sister chromatid cohesion (ortholog); positive regulation of DNA-directed DNA polymerase activity (ortholog); post-translational protein acetylation (ortholog); FOUND IN chromatin (ortholog); chromosome, centromeric region (ortholog); Ctf18 RFC-like complex (ortholog) 1 229493490 229509123 - 22301074;30032202 116911538 MODEL JAAIVD010000025;XM_032915530;XM_032915537;XM_032915543;XM_032915550 XP_032771421;XP_032771428;XP_032771434;XP_032771441 sister chromatid cohesion protein DCC1 protein-coding 626149592 LOC116913016 small nucleolar RNA U13 11 33841966 33842071 + 116913016 MODEL JAAIVD010000006;XR_004389568 snorna 626149595 LOC116907048 vomeronasal type-1 receptor 4-like 8 3408016 3410670 + 22301074;30032202 116907048 MODEL JAAIVD010000027;XM_032910003 XP_032765894 protein-coding 626149600 LOC116885667 ubiquitin-conjugating enzyme E2 N-like 16 44275061 44275990 + 30032202 116885667 MODEL JAAIVD010000004;XM_032886978 XP_032742869 protein-coding 626149605 Dnajc6 DnaJ heat shock protein family (Hsp40) member C6 INVOLVED IN clathrin coat disassembly (ortholog); clathrin-dependent endocytosis (ortholog); regulation of clathrin coat assembly (ortholog); PARTICIPATES IN altered clathrin-dependent synaptic vesicle endocytosis; clathrin-dependent synaptic vesicle endocytosis; Parkinson's disease pathway; ASSOCIATED WITH Combined Cerebellar and Peripheral Ataxia with Hearing Loss and Diabetes Mellitus (ortholog); genetic disease (ortholog); hepatocellular carcinoma (ortholog); FOUND IN extrinsic component of presynaptic endocytic zone membrane (ortholog); postsynaptic density (ortholog); synapse (ortholog) 1 52916507 53065839 - 22301074;30032202 116899685 MODEL JAAIVD010000025;XM_032901712;XM_032901719;XM_032901726;XM_032901734 XP_032757603;XP_032757610;XP_032757617;XP_032757625 putative tyrosine-protein phosphatase auxilin protein-coding 626149640 Trnas-uga transfer RNA serine (anticodon UGA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 4 2688052 2688132 + 116899951 MODEL JAAIVD010000003 trna 626149641 Shroom4 shroom family member 4 ENCODES a protein that exhibits actin filament binding (ortholog); myosin II binding (ortholog); INVOLVED IN actin filament organization (ortholog); brain development (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH intellectual disability (ortholog); Stocco Dos Santos type X-linked intellectual disability (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); apical plasma membrane (ortholog) X 16167475 16373694 - 30032202 116888998 MODEL JAAIVD010000014;XM_032890213 XP_032746104 protein Shroom4 protein-coding 626149655 Cfap141 cilia and flagella associated protein 141 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); axonemal microtubule (ortholog); sperm flagellum (ortholog) 3 63574326 63576143 - 116896624 MODEL JAAIVD010000012;XM_032897900 XP_032753791 C3H1orf189 chromosome 3 C1orf189 homolog;uncharacterized protein C1orf189 homolog protein-coding 626149661 Dnai2 dynein axonemal intermediate chain 2 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); primary ciliary dyskinesia (ortholog); FOUND IN 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog); axoneme (ortholog) 9 74564802 74593120 - 30032202 116909644 MODEL JAAIVD010000002;XM_032913288;XM_032913289 XP_032769179;XP_032769180 dynein intermediate chain 2, axonemal protein-coding 626149678 LOC116913055 U6 spliceosomal RNA 11 75201408 75201513 - 116913055 MODEL JAAIVD010000006;XR_004389589 snrna 626149681 Xylt2 xylosyltransferase 2 ENCODES a protein that exhibits magnesium ion binding (ortholog); manganese ion binding (ortholog); protein xylosyltransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); glycosaminoglycan biosynthetic process (ortholog); heparan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteogenesis imperfecta (ortholog); polycystic kidney disease (ortholog); FOUND IN extracellular space (ortholog) 9 50871062 50884784 + 22301074;30032202 116909231 MODEL JAAIVD010000002;XM_032912734 XP_032768625 protein-coding 626149696 LOC116897798 uncharacterized LOC116897798 4 4736351 4743492 - 116897798 MODEL JAAIVD010000003;XR_004387627 ncrna 626149700 LOC116905169 uncharacterized LOC116905169 7 88536199 88547909 + 116905169 MODEL JAAIVD010000026;XR_004388493 ncrna 626149706 C4H6orf132 chromosome 4 C6orf132 homolog 4 82412708 82448629 - 116899086 MODEL JAAIVD010000003;XM_032900588 XP_032756479 uncharacterized protein C6orf132 homolog protein-coding 626149716 Apoa1 apolipoprotein A1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein A-I receptor binding (ortholog); apolipoprotein receptor binding (ortholog); INVOLVED IN adrenal gland development (ortholog); amyloid-beta formation (ortholog); animal organ regeneration (ortholog); PARTICIPATES IN altered lipoprotein metabolic pathway; forkhead class A signaling pathway; lipoprotein metabolic pathway; ASSOCIATED WITH Acute Lung Injury (ortholog); Acute Tubulointerstitial Nephritis (ortholog); adenocarcinoma (ortholog); FOUND IN cell surface (ortholog); cytoplasmic vesicle (ortholog); discoidal high-density lipoprotein particle (ortholog) 8 40748861 40750779 + 22301074;30032202 116906754 MODEL JAAIVD010000027;XM_032909580 XP_032765471 apolipoprotein A-I protein-coding 626149724 Rnf212 ring finger protein 212 INVOLVED IN chiasma assembly (ortholog); meiotic gene conversion (ortholog); reciprocal meiotic recombination (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); spermatogenic failure 3 (ortholog); FOUND IN synaptonemal complex (ortholog) 11 18517918 18553046 - 30032202 116912371 MODEL JAAIVD010000006;XM_032916430 XP_032772321 probable E3 SUMO-protein ligase RNF212 protein-coding 626149740 LOC116897376 U4 spliceosomal RNA 3 119898065 119898231 - 116897376 MODEL JAAIVD010000012 pseudo 626149741 Lrp5 LDL receptor related protein 5 ENCODES a protein that exhibits coreceptor activity (ortholog); toxin transmembrane transporter activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN adipose tissue development (ortholog); amino acid transport (ortholog); anatomical structure regression (ortholog); PARTICIPATES IN altered Wnt signaling, canonical pathway; N-cadherin signaling pathway; Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant osteopetrosis 1 (ortholog); autosomal dominant polycystic kidney disease (ortholog); Bone Fractures (ortholog); FOUND IN plasma membrane (ortholog); receptor complex (ortholog) 2 3985487 4089098 + 22301074 116890807 MODEL JAAIVD010000001;XM_032891291 XP_032747182 low-density lipoprotein receptor-related protein 5 protein-coding 626149768 Nek6 NIMA related kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); DNA-binding transcription factor binding (ortholog); kinesin binding (ortholog); INVOLVED IN chromosome segregation (ortholog); peptidyl-serine phosphorylation (ortholog); positive regulation of canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 5 16285705 16357377 + 22301074 116901365 MODEL JAAIVD010000023;XM_032903225;XM_032903226;XM_032903227 XP_032759116;XP_032759117;XP_032759118 serine/threonine-protein kinase Nek6 protein-coding 626149790 Cebpg CCAAT enhancer binding protein gamma ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); enucleate erythrocyte differentiation (ortholog); immune response (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 2 163623780 163638648 + 30032202 116893363 MODEL JAAIVD010000001;XM_032895165 XP_032751056 CCAAT/enhancer-binding protein gamma protein-coding 626149797 LOC116899405 abl interactor 2-like 4 132279461 132301254 - 30032202 116899405 MODEL JAAIVD010000003;XM_032901141 XP_032757032 protein-coding 626149803 Erlec1 endoplasmic reticulum lectin 1 ENCODES a protein that exhibits unfolded protein binding (ortholog); INVOLVED IN ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); cholestasis (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 11 98423402 98463030 - 30032202 116912508 MODEL JAAIVD010000006;XM_032916593;XM_032916595 XP_032772484;XP_032772486 protein-coding 626149826 Ndufv1 NADH:ubiquinone oxidoreductase core subunit V1 ENCODES a protein that exhibits NADH dehydrogenase (ubiquinone) activity (ortholog); INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); mitochondrial electron transport, NADH to ubiquinone (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 8 (ortholog); Disease Progression (ortholog); genetic disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 2 3625058 3630288 + 22301074;30032202 116890794 MODEL JAAIVD010000001;XM_032891269 XP_032747160 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial protein-coding 626149840 LOC116910273 cyclin-dependent kinase 4-like 9 36375211 36376215 + 116910273 MODEL JAAIVD010000002 pseudo 626149841 Lrrc38 leucine rich repeat containing 38 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of voltage-gated potassium channel activity (ortholog); potassium ion transmembrane transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) 1 14786924 14809964 - 30032202 116893087 MODEL JAAIVD010000025;XM_032895034 XP_032750925 leucine-rich repeat-containing protein 38 protein-coding 626149847 Nadsyn1 NAD synthetase 1 ENCODES a protein that exhibits NAD+ synthase (glutamine-hydrolyzing) activity (ortholog); INVOLVED IN 'de novo' NAD+ biosynthetic process from L-tryptophan (ortholog); NAD+ biosynthetic process via the salvage pathway (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; de novo nicotinamide adenine dinucleotide biosynthetic pathway; glutamic acid/glutamate metabolic pathway; ASSOCIATED WITH Dyslipidemias (ortholog); genetic disease (ortholog); high grade glioma (ortholog); FOUND IN cytosol (ortholog) 2 5885077 5912798 + 22301074;30032202 116890827 MODEL JAAIVD010000001;XM_032891340;XM_032891341 XP_032747231;XP_032747232 glutamine-dependent NAD(+) synthetase protein-coding 626149875 LOC116913527 L-lactate dehydrogenase A chain-like 12 18574013 18575027 - 116913527 MODEL JAAIVD010000007 pseudo 626149876 Znf618 zinc finger protein 618 ENCODES a protein that exhibits chromatin-protein adaptor activity (ortholog); identical protein binding (ortholog); transcription coregulator binding (ortholog); FOUND IN chromatin (ortholog); pericentric heterochromatin (ortholog) 1 90432584 90487980 - 116901303 MODEL JAAIVD010000025;XM_032903106;XM_032903115;XM_032903124;XM_032903131 XP_032758997;XP_032759006;XP_032759015;XP_032759022 protein-coding 626149899 Psmd14 proteasome 26S subunit, non-ATPase 14 ENCODES a protein that exhibits endopeptidase activator activity (ortholog); metal-dependent deubiquitinase activity (ortholog); proteasome binding (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); protein K63-linked deubiquitination (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); autistic disorder (ortholog); Disease Progression (ortholog); FOUND IN cytosolic proteasome complex (ortholog); proteasome accessory complex (ortholog); proteasome complex (ortholog) 5 39350825 39445267 + 22301074;30032202 116901447 MODEL JAAIVD010000023;XM_032903380 XP_032759271 26S proteasome non-ATPase regulatory subunit 14 protein-coding 626149915 LOC116902507 small nucleolar RNA SNORD36 5 9741997 9742067 - 116902507 MODEL JAAIVD010000023;XR_004388117 snorna 626149918 Phf8 PHD finger protein 8 ENCODES a protein that exhibits chromatin binding (ortholog); histone demethylase activity (ortholog); histone H3K27me2/H3K27me3 demethylase activity (ortholog); INVOLVED IN G1/S transition of mitotic cell cycle (ortholog); negative regulation of rDNA heterochromatin formation (ortholog); positive regulation of DNA-templated transcription (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); prostate cancer (ortholog); FOUND IN nuclear membrane (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) X 12621543 12683751 + 30032202 116888499 MODEL JAAIVD010000014;XM_032889791 XP_032745682 histone lysine demethylase PHF8 protein-coding 626149940 Fus FUS RNA binding protein ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN amyloid fibril formation (ortholog); cellular response to calcium ion (ortholog); gene expression (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 6 (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); dendritic spine (ortholog) 2 73919591 73933682 - 22301074;30032202 116891444 MODEL JAAIVD010000001;XM_032892509;XM_032892510 XP_032748400;XP_032748401 RNA-binding protein FUS protein-coding 626149961 LOC116911617 FANCD2 opposite strand protein-like 10 28691658 28692207 - 116911617 MODEL JAAIVD010000005 pseudo 626149962 Rusc1 RUN and SH3 domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); INVOLVED IN protein polyubiquitination (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); early endosome (ortholog) 3 64585451 64594640 + 22301074;30032202 116896669 MODEL JAAIVD010000012;XM_032898032;XM_032898033;XM_032898034;XM_032898035;XM_032898036;XM_032898037;XR_004387354 XP_032753923;XP_032753924;XP_032753925;XP_032753926;XP_032753927;XP_032753928 RUN and SH3 domain-containing protein 1 protein-coding 626149996 LOC116908984 keratin, type I cuticular Ha3-II 9 54769285 54775180 - 22301074;30032202 116908984 MODEL AB013294;JAAIVD010000002;XM_032912455 BAA25985;XP_032768346 HKA1 hair keratin A1 protein-coding 626150007 LOC116915132 small nucleolar RNA SNORA17 13 65671066 65671191 + 116915132 MODEL JAAIVD010000008;XR_004389811 snorna 626150010 LOC116912709 serine/threonine/tyrosine-interacting protein-like 11 21015743 21016523 + 22301074;30032202 116912709 MODEL JAAIVD010000006;XM_032916835 XP_032772726 protein-coding 626150014 LOC116889885 vomeronasal type-2 receptor 116-like 1 158121561 158173892 + 116889885 MODEL JAAIVD010000025 pseudo 626150015 LOC116911054 60S ribosomal protein L12-like 10 69689621 69690375 + 116911054 MODEL JAAIVD010000005 pseudo 626150016 LOC116895449 forkhead box protein K2-like 3 75567974 75569697 + 116895449 MODEL JAAIVD010000012 pseudo 626150017 LOC116900138 olfactory receptor 1L8-like 5 14596141 14597073 - 22301074;30032202 116900138 MODEL JAAIVD010000023;XM_032901912 XP_032757803 protein-coding 626150020 Cdo1 cysteine dioxygenase type 1 ENCODES a protein that exhibits cysteine dioxygenase activity (ortholog); ferrous iron binding (ortholog); nickel cation binding (ortholog); INVOLVED IN L-cysteine catabolic process (ortholog); lactation (ortholog); response to amino acid (ortholog); PARTICIPATES IN cysteine metabolic pathway; mercaptolactate-cysteine disulfiduria pathway; ocular nonnephropathic cystinosis pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); hypertension (ortholog); myeloid leukemia (ortholog); FOUND IN cytosol (ortholog) 15 40325147 40340048 + 30032202 116884596 MODEL JAAIVD010000010;XM_032885737 XP_032741628 protein-coding 626150029 LOC116901700 olfactory receptor 8B8-like 5 81981160 81982092 + 22301074;30032202 116901700 MODEL JAAIVD010000023;XM_032903828 XP_032759719 protein-coding 626150032 Odad2 outer dynein arm docking complex subunit 2 INVOLVED IN cilium movement (ortholog); determination of left/right symmetry (ortholog); heart development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Kartagener syndrome (ortholog); male infertility (ortholog); FOUND IN axoneme (ortholog); ciliary base (ortholog) 14 28671570 28838443 + 22301074 116883388 MODEL JAAIVD010000009;XM_032884508;XM_032884509 XP_032740399;XP_032740400 Armc4 armadillo repeat containing 4;armadillo repeat-containing protein 4 protein-coding 626150057 Pqbp1 polyglutamine binding protein 1 ENCODES a protein that exhibits double-stranded DNA binding (ortholog); GTPase binding (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); alternative mRNA splicing, via spliceosome (ortholog); cellular response to exogenous dsRNA (ortholog); ASSOCIATED WITH atrial heart septal defect (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); ciliary base (ortholog) X 14236306 14240589 + 22301074;30032202 116888463 MODEL JAAIVD010000014;XM_032889742;XM_032889743 XP_032745633;XP_032745634 polyglutamine-binding protein 1 protein-coding 626150073 Casq1 calsequestrin 1 ENCODES a protein that exhibits calcium ion binding (ortholog); identical protein binding (ortholog); INVOLVED IN endoplasmic reticulum organization (ortholog); establishment of localization in cell (ortholog); positive regulation of release of sequestered calcium ion into cytosol (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); genetic disease (ortholog); malignant hyperthermia (ortholog); FOUND IN endoplasmic reticulum (ortholog); I band (ortholog); mitochondrial matrix (ortholog) 10 51322655 51331987 - 22301074;30032202 116911484 MODEL JAAIVD010000005;XM_032915466 XP_032771357 calsequestrin-1 protein-coding 626150088 Eps15l1 epidermal growth factor receptor pathway substrate 15 like 1 INVOLVED IN synaptic vesicle endocytosis (ortholog); FOUND IN clathrin coat of coated pit (ortholog); presynapse (ortholog) 13 14165215 14239509 - 22301074;30032202 116915009 MODEL JAAIVD010000008;XM_032919405;XM_032919406;XM_032919407;XM_032919408;XM_032919410;XM_032919411;XM_032919412;XM_032919413;XM_032919414;XM_032919415;XR_004389788 XP_032775296;XP_032775297;XP_032775298;XP_032775299;XP_032775301;XP_032775302;XP_032775303;XP_032775304;XP_032775305;XP_032775306 epidermal growth factor receptor substrate 15-like 1 protein-coding 626150139 LOC116906854 olfactory receptor 145-like 8 32267479 32275511 + 22301074;30032202 116906854 MODEL JAAIVD010000027;XM_032909750;XM_032909751;XM_032909752;XM_032909753 XP_032765641;XP_032765642;XP_032765643;XP_032765644 protein-coding 626150150 LOC116890248 uncharacterized LOC116890248 1 271872650 271879189 - 116890248 MODEL JAAIVD010000025;XR_004386532 ncrna 626150154 Ly6g6c lymphocyte antigen 6 family member G6C ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to bacterium (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 18 7664579 7667696 + 30032202 116887191 MODEL JAAIVD010000013;XM_032888745 XP_032744636 lymphocyte antigen 6 complex locus protein G6c protein-coding 626150161 Pafah1b2 platelet activating factor acetylhydrolase 1b catalytic subunit 2 ENCODES a protein that exhibits 1-alkyl-2-acetylglycerophosphocholine esterase activity (ortholog); identical protein binding (ortholog); platelet-activating factor acetyltransferase activity (ortholog); INVOLVED IN positive regulation of macroautophagy (ortholog); spermatogenesis (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH lymphoma (ortholog); status epilepticus (ortholog); FOUND IN 1-alkyl-2-acetylglycerophosphocholine esterase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 40484253 40505591 - 116906640 MODEL JAAIVD010000027;XM_032909417;XM_032909418 XP_032765308;XP_032765309 platelet-activating factor acetylhydrolase IB subunit beta protein-coding 626150174 LOC116904568 early activation antigen CD69-like 6 18261610 18271959 + 30032202 116904568 MODEL JAAIVD010000024;XM_032907366 XP_032763257 protein-coding 626150183 Sgce sarcoglycan epsilon INVOLVED IN kidney development (ortholog); skeletal muscle tissue development (ortholog); ASSOCIATED WITH genetic disease (ortholog); myoclonic dystonia (ortholog); myoclonic dystonia 11 (ortholog); FOUND IN dendrite membrane (ortholog); dystrophin-associated glycoprotein complex (ortholog); Golgi apparatus (ortholog) 6 133867564 133923236 + 22301074;30032202 116904102 MODEL JAAIVD010000024;XM_032906970;XM_032906971;XM_032906973;XM_032906974 XP_032762861;XP_032762862;XP_032762864;XP_032762865 epsilon-sarcoglycan protein-coding 626150203 ND5 NADH dehydrogenase subunit 5 MT 11727 13556 + 7751808 B7SE71;E1U5R7 REVIEWED EU273707 ABX45242;YP_002791026 protein-coding 626150204 Socs3 suppressor of cytokine signaling 3 ENCODES a protein that exhibits miRNA binding (ortholog); phosphotyrosine residue binding (ortholog); protein tyrosine kinase inhibitor activity (ortholog); INVOLVED IN animal organ regeneration (ortholog); branching involved in labyrinthine layer morphogenesis (ortholog); cell surface receptor signaling pathway via JAK-STAT (ortholog); PARTICIPATES IN erythropoietin signaling pathway; insulin signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH atherosclerosis (ortholog); Burns (ortholog); cholangiocarcinoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) 9 66089076 66092476 + 22301074;30032202 116909945 MODEL JAAIVD010000002;XM_032913720 XP_032769611 protein-coding 626150210 Pros1 protein S ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN liver development (ortholog); negative regulation of coagulation (ortholog); positive regulation of phagocytosis (ortholog); PARTICIPATES IN protein C anticoagulant pathway; ASSOCIATED WITH adult respiratory distress syndrome (ortholog); autosomal dominant thrombophilia due to protein S deficiency (ortholog); autosomal recessive thrombophilia due to protein S deficiency (ortholog); FOUND IN extracellular space (ortholog); protein-containing complex (ortholog) 10 94689181 94743074 + 22301074;30032202 116911394 MODEL JAAIVD010000005;XM_032915355 XP_032771246 vitamin K-dependent protein S protein-coding 626150229 Hgsnat heparan-alpha-glucosaminide N-acetyltransferase ENCODES a protein that exhibits acyltransferase activity (ortholog); heparan-alpha-glucosaminide N-acetyltransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan catabolic process (ortholog); lysosomal transport (ortholog); protein complex oligomerization (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN lysosomal lumen (ortholog); lysosomal membrane (ortholog) 13 60532159 60563289 + 30032202 116914570 MODEL JAAIVD010000008;XM_032918927 XP_032774818 protein-coding 626150251 Washc4 WASH complex subunit 4 INVOLVED IN cognition (ortholog); endolysosomal toll-like receptor signaling pathway (ortholog); endosomal transport (ortholog); PARTICIPATES IN retromer-mediated pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 43 (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN BLOC-1 complex (ortholog); endosome (ortholog); nucleoplasm (ortholog) 1 164909803 164964096 - 30032202 116907507 MODEL JAAIVD010000025;XM_032910510 XP_032766401 protein-coding 626150288 Cd8b CD8 subunit beta INVOLVED IN T cell activation (ortholog); T cell receptor signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 6 74331049 74346432 + 30032202 116903682 MODEL JAAIVD010000024;XM_032906343 XP_032762234 CD8b molecule;T-cell surface glycoprotein CD8 beta chain protein-coding 626150298 Nr2f1 nuclear receptor subfamily 2 group F member 1 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); retinoic acid-responsive element binding (ortholog); INVOLVED IN cerebral cortex regionalization (ortholog); forebrain development (ortholog); interneuron migration (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Bosch-Boonstra-Schaaf optic atrophy syndrome (ortholog); Breast Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 218424902 218434065 - 30032202 116897345 MODEL JAAIVD010000012;XM_032899102;XM_032899103 XP_032754993;XP_032754994 COUP transcription factor 1 protein-coding 626150309 LOC116908301 39S ribosomal protein L1, mitochondrial-like 8 45988532 45989436 + 116908301 MODEL JAAIVD010000027 pseudo 626150310 Vps37b VPS37B subunit of ESCRT-I ENCODES a protein that exhibits calcium-dependent protein binding (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); endosome membrane (ortholog) 16 29828833 29856682 + 30032202 116885958 MODEL JAAIVD010000004;XM_032887275 XP_032743166 vacuolar protein sorting-associated protein 37B protein-coding 626150318 LOC116889852 heat shock cognate 71 kDa protein-like 1 239215366 239370547 - 116889852 MODEL JAAIVD010000025 pseudo 626150319 LOC116889781 zinc finger protein 883-like 116889781 MODEL JAAIVD010000324 pseudo 626150320 LOC116888534 ubiquitin-conjugating enzyme E2 Q2-like X 8448681 8450014 - 116888534 MODEL JAAIVD010000014 pseudo 626150321 LOC116898157 uncharacterized LOC116898157 4 119110544 119111991 + 116898157 MODEL JAAIVD010000003;XR_004387640 ncrna 626150325 LOC116893465 zinc finger protein 582-like 2 179761227 179771542 - 30032202 116893465 MODEL JAAIVD010000001;XM_032895224 XP_032751115 protein-coding 626150331 Pfn1 profilin 1 ENCODES a protein that exhibits actin binding (ortholog); actin monomer binding (ortholog); adenyl-nucleotide exchange factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cellular response to growth factor stimulus (ortholog); modification of postsynaptic actin cytoskeleton (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 18 (ortholog); esophagus squamous cell carcinoma (ortholog); FOUND IN cell cortex (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) 9 50262820 50266063 - 22301074;30032202 116910492 MODEL JAAIVD010000002;XM_032914383 XP_032770274 profilin-1 protein-coding 626150338 LOC116889730 30S ribosomal protein S4-like 22301074;30032202 116889730 MODEL JAAIVD010000065;XM_032890605 XP_032746496 protein-coding 626150339 Slc30a1 solute carrier family 30 member 1 ENCODES a protein that exhibits calcium channel inhibitor activity (ortholog); zinc ion transmembrane transporter activity (ortholog); zinc:proton antiporter activity (ortholog); INVOLVED IN cadmium ion transmembrane transport (ortholog); calcium ion import (ortholog); defense response to bacterium (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytoplasmic vesicle membrane (ortholog) 10 70000887 70007392 + 22301074;30032202 116911142 MODEL JAAIVD010000005;XM_032914994 XP_032770885 zinc transporter 1 protein-coding 626150345 Rassf4 Ras association domain family member 4 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 6 29934927 29969104 + 22301074;30032202 116903360 MODEL JAAIVD010000024;XM_032905834 XP_032761725 ras association domain-containing protein 4 protein-coding 626150360 Phldb1 pleckstrin homology like domain family B member 1 INVOLVED IN basement membrane organization (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); high grade glioma (ortholog); osteogenesis imperfecta type 23 (ortholog); FOUND IN basal cortex (ortholog) 8 39220055 39267583 - 22301074;30032202 116908295 MODEL JAAIVD010000027;XM_032911559;XM_032911560;XM_032911562;XM_032911563;XM_032911564;XM_032911565;XM_032911566;XM_032911567;XM_032911568;XM_032911569;XM_032911570;XM_032911571;XM_032911572;XM_032911573;XM_032911574;XR_004388878 XP_032767450;XP_032767451;XP_032767453;XP_032767454;XP_032767455;XP_032767456;XP_032767457;XP_032767458;XP_032767459;XP_032767460;XP_032767461;XP_032767462;XP_032767463;XP_032767464;XP_032767465 pleckstrin homology-like domain family B member 1 protein-coding 626150411 LOC116884862 non-histone chromosomal protein HMG-14-like 15 36210486 36210775 + 116884862 MODEL JAAIVD010000010 pseudo 626150412 LOC116907591 thioredoxin-like protein 4A 8 14435882 14436073 - 22301074;30032202 116907591 MODEL JAAIVD010000027;XM_032910631 XP_032766522 protein-coding 626150415 C1H1orf216 chromosome 1 C1orf216 homolog 1 31687273 31707254 - 116896584 MODEL JAAIVD010000025;XM_032897815;XM_032897825 XP_032753706;XP_032753716 UPF0500 protein C1orf216 homolog protein-coding 626150425 LOC116892020 uncharacterized LOC116892020 2 137728066 137779152 + 116892020 MODEL JAAIVD010000001;XR_004386890 ncrna 626150433 Sntb1 syntrophin beta 1 ENCODES a protein that exhibits PDZ domain binding (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); FOUND IN protein-containing complex (ortholog); synapse (ortholog) 1 230036655 230298719 - 22301074;30032202 116911620 MODEL JAAIVD010000025;XM_032915591 XP_032771482 beta-1-syntrophin protein-coding 626150444 LOC116913109 uncharacterized LOC116913109 12 86765137 86767292 - 116913109 MODEL JAAIVD010000007;XR_004389598 ncrna 626150448 LOC116890391 U6 spliceosomal RNA 1 46789805 46789912 + 116890391 MODEL JAAIVD010000025;XR_004386597 snrna 626150451 LOC116912988 small nucleolar RNA SNORA17 11 3137630 3137761 + 116912988 MODEL JAAIVD010000006;XR_004389551 snorna 626150454 LOC116911203 heat shock protein HSP 90-alpha-like 10 42180231 42182537 - 22301074;30032202 116911203 MODEL JAAIVD010000005;XM_032915078 XP_032770969 protein-coding 626150458 LOC116900247 olfactory receptor 9G4 5 62998239 62999186 - 22301074;30032202 116900247 MODEL JAAIVD010000023;XM_032901999 XP_032757890 protein-coding 626150462 Slc34a1 solute carrier family 34 member 1 ENCODES a protein that exhibits identical protein binding (ortholog); PDZ domain binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN arsenate ion transmembrane transport (ortholog); bone remodeling (ortholog); calcium ion homeostasis (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); anti-basement membrane glomerulonephritis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); brush border membrane (ortholog) 14 73720109 73735143 + 22301074;30032202 116883792 MODEL JAAIVD010000009;XM_032885039 XP_032740930 sodium-dependent phosphate transport protein 2A protein-coding 626150479 Ncam2 neural cell adhesion molecule 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN axonal fasciculation (ortholog); ASSOCIATED WITH amenorrhea (ortholog); FOUND IN axon (ortholog); nuclear body (ortholog); plasma membrane (ortholog) 4 58149711 58618057 + 22301074 116899041 MODEL JAAIVD010000003;XM_032900505 XP_032756396 protein-coding 626150501 Nkx1-1 NK1 homeobox 1 INVOLVED IN lipid metabolic process (ortholog); nervous system process (ortholog); regulation of generation of precursor metabolites and energy (ortholog) 11 71415773 71419123 + 22301074;30032202 116912888 MODEL JAAIVD010000006;XM_032917143 XP_032773034 NK1 transcription factor-related protein 1 protein-coding 626150505 Tmem9 transmembrane protein 9 INVOLVED IN endosomal lumen acidification (ortholog); lysosomal lumen acidification (ortholog); positive regulation of canonical Wnt signaling pathway (ortholog); FOUND IN intercellular bridge (ortholog); late endosome (ortholog); lysosomal membrane (ortholog) 10 20316107 20333758 - 22301074;30032202 116911302 MODEL JAAIVD010000005;XM_032915216;XM_032915217 XP_032771107;XP_032771108 protein-coding 626150518 Spg21 SPG21 abhydrolase domain containing, maspardin ENCODES a protein that exhibits CD4 receptor binding (ortholog); INVOLVED IN collateral sprouting (ortholog); epidermal growth factor receptor signaling pathway (ortholog); gene expression (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); MAST syndrome (ortholog); Spinocerebellar Ataxia 50 (ortholog); FOUND IN cytosol (ortholog); trans-Golgi network transport vesicle (ortholog) 8 59769242 59797785 + 30032202 116907066 MODEL JAAIVD010000027;XM_032910021 XP_032765912 maspardin protein-coding 626150531 Kl klotho ENCODES a protein that exhibits fibroblast growth factor binding (ortholog); fibroblast growth factor receptor binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); determination of adult lifespan (ortholog); energy reserve metabolic process (ortholog); PARTICIPATES IN fibroblast growth factor signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amenorrhea (ortholog); Animal Disease Models (ortholog) 16 502564 543043 + 22301074;30032202 116885353 MODEL JAAIVD010000004;XM_032886628 XP_032742519 protein-coding 626150540 Ikbip IKBKB interacting protein INVOLVED IN response to interleukin-1 (ortholog); response to lipopolysaccharide (ortholog); response to tumor necrosis factor (ortholog); FOUND IN endoplasmic reticulum (ortholog); nucleolus (ortholog) 1 170158816 170179075 + 116908066 MODEL JAAIVD010000025;XM_032911340;XM_032911347 XP_032767231;XP_032767238 inhibitor of nuclear factor kappa-B kinase-interacting protein protein-coding 626150550 Katnal1 katanin catalytic subunit A1 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); microtubule severing ATPase activity (ortholog); INVOLVED IN microtubule severing (ortholog); spermatogenesis (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytosol (ortholog) 16 4924424 4976839 + 22301074;30032202 116885602 MODEL JAAIVD010000004;XM_032886904 XP_032742795 katanin p60 ATPase-containing subunit A-like 1 protein-coding 626150565 LOC116902791 acyl-CoA-binding protein-like 6 77394391 77394575 + 22301074;30032202 116902791 MODEL JAAIVD010000024;XM_032905128 XP_032761019 protein-coding 626150569 LOC116908010 zinc finger protein 660 8 113999241 114028580 + 30032202 116908010 MODEL JAAIVD010000027;XM_032911267;XM_032911268 XP_032767158;XP_032767159 zinc finger protein with KRAB and SCAN domains 7 protein-coding 626150585 LOC116894671 trace amine-associated receptor 7c 2 210080545 210081621 + 22301074;30032202 116894671 MODEL JAAIVD010000001;XM_032896374 XP_032752265 protein-coding 626150588 Tssc4 tumor suppressing subtransferable candidate 4 ENCODES a protein that exhibits molecular sequestering activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN spliceosomal snRNP assembly (ortholog); spliceosomal tri-snRNP complex assembly (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); U5 snRNP (ortholog) 2 6632020 6634851 - 116890837 MODEL JAAIVD010000001;XM_032891362;XM_032891363;XM_032891364 XP_032747253;XP_032747254;XP_032747255 protein TSSC4 protein-coding 626150599 Stk24 serine/threonine kinase 24 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); INVOLVED IN cellular response to oxidative stress (ortholog); cellular response to starvation (ortholog); execution phase of apoptosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); FAR/SIN/STRIPAK complex (ortholog) 12 3500283 3597793 + 22301074 116913135 MODEL JAAIVD010000007;XM_032917339 XP_032773230 serine/threonine-protein kinase 24 protein-coding 626150614 LOC116893693 olfactory receptor 5B12-like 2 12974396 12975340 - 22301074;30032202 116893693 MODEL JAAIVD010000001;XM_032895409 XP_032751300 protein-coding 626150617 LOC116884895 fructose-bisphosphate aldolase A-like 15 1010423 1013279 + 22301074;30032202 116884895 MODEL JAAIVD010000010;XM_032886125 XP_032742016 protein-coding 626150622 Rpl36 ribosomal protein L36 ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH myoepithelioma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 4 87988976 87989773 + 22301074;30032202 116899188 MODEL JAAIVD010000003;XM_032900768 XP_032756659 60S ribosomal protein L36 protein-coding 626150629 Znf628 zinc finger protein 628 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); spermatogenesis (ortholog); FOUND IN nucleus (ortholog) 2 177498626 177506092 + 30032202 116892676 MODEL JAAIVD010000001;XM_032894508;XM_032894509;XM_032894510;XM_032894511;XM_032894512 XP_032750399;XP_032750400;XP_032750401;XP_032750402;XP_032750403 protein-coding 626150646 LOC116900000 heterogeneous nuclear ribonucleoprotein A1-like 5 5503649 5507831 + 116900000 MODEL JAAIVD010000023 pseudo 626150647 Qdpr quinoid dihydropteridine reductase ENCODES a protein that exhibits 6,7-dihydropteridine reductase activity (ortholog); identical protein binding (ortholog); NADH binding (ortholog); INVOLVED IN cellular response to xenobiotic stimulus (ortholog); L-phenylalanine catabolic process (ortholog); liver development (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; dopamine biosynthetic pathway; epinephrine biosynthetic pathway; ASSOCIATED WITH Acute Liver Failure (ortholog); BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia C (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 11 60429487 60443023 + 30032202 116912416 MODEL JAAIVD010000006;XM_032916482 XP_032772373 dihydropteridine reductase protein-coding 626150658 LOC116894138 olfactory receptor 52E5-like 2 104016776 104017739 + 22301074 116894138 MODEL JAAIVD010000001;XM_032895856 XP_032751747 protein-coding 626150662 LOC116883893 60S ribosomal protein L9-like 14 26656853 26660126 - 116883893 MODEL JAAIVD010000009 pseudo 626150663 LOC116901427 uncharacterized LOC116901427 5 35993283 35994503 + 116901427 MODEL JAAIVD010000023;XR_004387990 ncrna 626150667 Vps13d vacuolar protein sorting 13 homolog D INVOLVED IN mitochondrion organization (ortholog); positive regulation of mitophagy (ortholog); ASSOCIATED WITH arthrogryposis multiplex congenita (ortholog); autosomal recessive cerebellar ataxia (ortholog); autosomal recessive spinocerebellar ataxia 4 (ortholog); FOUND IN mitochondrion (ortholog) 1 13628444 13852302 + 22301074;30032202 116893036 MODEL JAAIVD010000025;XM_032895002;XM_032895011;XM_032895015 XP_032750893;XP_032750902;XP_032750906 vacuolar protein sorting-associated protein 13D protein-coding 626150749 LOC116905212 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2-like 7 94329905 94330411 + 22301074 116905212 MODEL JAAIVD010000026;XM_032908027 XP_032763918 protein-coding 626150752 Tmem65 transmembrane protein 65 INVOLVED IN cardiac conduction (ortholog); cardiac ventricle development (ortholog); regulation of cardiac conduction (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN intercalated disc (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 233305537 233349520 - 30032202 116911795 MODEL JAAIVD010000025;XM_032915801 XP_032771692 protein-coding 626150763 LOC116901741 proteasome inhibitor PI31 subunit-like 1 126019417 126025913 - 116901741 MODEL JAAIVD010000025 pseudo 626150764 Trnad-guc transfer RNA aspartic acid (anticodon GUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 16 28503741 28503812 + 116886023 MODEL JAAIVD010000004 trna 626150765 LOC116914257 beta-defensin 50 13 64646448 64659001 - 116914257 MODEL JAAIVD010000008;XM_032918469 XP_032774360 protein-coding 626150771 LOC116890279 chymotrypsin-like elastase family member 3B 1 20797439 20803902 + 22301074;30032202 116890279 MODEL JAAIVD010000025;XM_032890991 XP_032746882 protein-coding 626150781 Bche butyrylcholinesterase ENCODES a protein that exhibits acetylcholinesterase activity (ortholog); choline binding (ortholog); cholinesterase activity (ortholog); INVOLVED IN choline metabolic process (ortholog); learning (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN heroin pharmacodynamics pathway; heroin pharmacokinetics pathway; irinotecan pharmacodynamics pathway; ASSOCIATED WITH Acholinesterasemia (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum lumen (ortholog); extracellular space (ortholog) 3 80060767 80136367 + 30032202 116896779 MODEL JAAIVD010000012;XM_032898240 XP_032754131 cholinesterase protein-coding 626150789 Wdr90 WD repeat domain 90 ENCODES a protein that exhibits microtubule binding (ortholog); INVOLVED IN centriole elongation (ortholog); cilium assembly (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN centriolar satellite (ortholog); centriole (ortholog); centrosome (ortholog) 9 3109934 3126683 - 22301074;30032202 116908550 MODEL JAAIVD010000002;XM_032911753 XP_032767644 WD repeat-containing protein 90 protein-coding 626150834 LOC116891906 olfactory receptor 5B12-like 2 13570717 13571649 + 116891906 MODEL JAAIVD010000001 pseudo 626150835 Tmem35a transmembrane protein 35A ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); INVOLVED IN chaperone-mediated protein complex assembly (ortholog); positive regulation of protein localization to cell surface (ortholog); FOUND IN endoplasmic reticulum (ortholog) X 87290836 87301603 - 30032202 116888828 MODEL JAAIVD010000014;XM_032890104 XP_032745995 protein-coding 626150841 Znf250 zinc finger protein 250 ENCODES a protein that exhibits identical protein binding (ortholog); sequence-specific double-stranded DNA binding (ortholog) 1 249237859 249252126 - 22301074 116913442 MODEL JAAIVD010000025;XM_032917645 XP_032773536 protein-coding 626150850 Spaca4 sperm acrosome associated 4 INVOLVED IN binding of sperm to zona pellucida (ortholog); fertilization (ortholog); FOUND IN inner acrosomal membrane (ortholog); outer acrosomal membrane (ortholog) 2 153795275 153796202 + 116892130 MODEL JAAIVD010000001;XM_032893617 XP_032749508 sperm acrosome membrane-associated protein 4 protein-coding 626150855 LOC116889226 ferritin light chain-like X 10847494 10848964 + 22301074;30032202 116889226 MODEL JAAIVD010000014;XM_032890378 XP_032746269 protein-coding 626150860 Pts 6-pyruvoyltetrahydropterin synthase ENCODES a protein that exhibits 6-pyruvoyltetrahydropterin synthase activity (ortholog); identical protein binding (ortholog); INVOLVED IN tetrahydrobiopterin biosynthetic process (ortholog); tetrahydrobiopterin metabolic process (ortholog); PARTICIPATES IN dopa responsive dystonia pathway; Segawa syndrome pathway; ASSOCIATED WITH BH4-deficient hyperphenylalaninemia A (ortholog); BH4-deficient hyperphenylalaninemia B (ortholog); disease of metabolism (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 8 44992671 44999576 - 22301074;30032202 116907731 MODEL JAAIVD010000027;XM_032910857 XP_032766748 6-pyruvoyl tetrahydrobiopterin synthase protein-coding 626150870 LOC116910753 U2 spliceosomal RNA 9 67436496 67436650 + 116910753 MODEL JAAIVD010000002 pseudo 626150871 Mea1 male-enhanced antigen 1 FOUND IN cytoplasm (ortholog) 4 83181716 83183558 - 30032202 116899099 MODEL JAAIVD010000003;XM_032900610;XM_032900611;XM_032900612 XP_032756501;XP_032756502;XP_032756503 protein-coding 626150885 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41427154 41427225 + 116884197 MODEL JAAIVD010000009 trna 626150886 Gpx5 glutathione peroxidase 5 INVOLVED IN cellular response to oxidative stress (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN extracellular space (ortholog); sperm plasma membrane (ortholog) 14 41471492 41478386 - 1386734;22301074;30032202 116883829 MODEL JAAIVD010000009;X62404;XM_032885088;XM_032885089 CAA44274;XP_032740979;XP_032740980 epididymal secretory glutathione peroxidase protein-coding 626150899 LOC116899453 metallothionein-2-like 1 49646746 49646844 - 22301074 116899453 MODEL JAAIVD010000025;XM_032901235 XP_032757126 protein-coding 626150902 Hdgfl1 HDGF like 1 14 45815799 45817819 - 30032202 116883944 MODEL JAAIVD010000009;XM_032885194;XM_032885195 XP_032741085;XP_032741086 hepatoma-derived growth factor-like protein 1 protein-coding 626150910 Cnot1 CCR4-NOT transcription complex subunit 1 ENCODES a protein that exhibits armadillo repeat domain binding (ortholog); molecular adaptor activity (ortholog); nuclear estrogen receptor binding (ortholog); INVOLVED IN miRNA-mediated post-transcriptional gene silencing (ortholog); negative regulation of intracellular estrogen receptor signaling pathway (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN microRNA pathway; ASSOCIATED WITH alopecia-mental retardation syndrome 4 (ortholog); genetic disease (ortholog); holoprosencephaly (ortholog); FOUND IN CCR4-NOT complex (ortholog); cytosol (ortholog); P-body (ortholog) 17 2539392 2624541 - 30032202 116886525 MODEL JAAIVD010000011;XM_032888037;XM_032888038;XM_032888039;XM_032888040;XM_032888041;XM_032888042;XM_032888043;XM_032888044;XM_032888045 XP_032743928;XP_032743929;XP_032743930;XP_032743931;XP_032743932;XP_032743933;XP_032743934;XP_032743935;XP_032743936 protein-coding 626150980 LOC116903434 cyclin-dependent kinases regulatory subunit 2-like 6 35355616 35356036 + 30032202 116903434 MODEL JAAIVD010000024;XM_032905987 XP_032761878 protein-coding 626150985 Gpsm2 G protein signaling modulator 2 ENCODES a protein that exhibits dynein complex binding (ortholog); G-protein alpha-subunit binding (ortholog); GDP-dissociation inhibitor activity (ortholog); INVOLVED IN establishment of mitotic spindle orientation (ortholog); maintenance of centrosome location (ortholog); mitotic spindle organization (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 7 (ortholog); Chudley-Mccullough syndrome (ortholog); FOUND IN cell cortex (ortholog); centrosome (ortholog); cytoplasm (ortholog) 3 49539745 49580550 + 22301074 116895775 MODEL JAAIVD010000012;XM_032896926 XP_032752817 G-protein-signaling modulator 2 protein-coding 626151003 LOC116898118 uncharacterized LOC116898118 4 105715623 105721024 - 116898118 MODEL JAAIVD010000003;XM_032899499 XP_032755390 uncharacterized protein LOC116898118 protein-coding 626151007 Elob elongin B ENCODES a protein that exhibits protein-containing complex binding (ortholog); transcription coactivator activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); target-directed miRNA degradation (ortholog); transcription initiation at RNA polymerase II promoter (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); Cul5-RING ubiquitin ligase complex (ortholog); elongin complex (ortholog) 9 1132957 1137643 - 22301074;30032202 116909760 MODEL JAAIVD010000002;XM_032913445 XP_032769336 elongin-B protein-coding 626151015 LOC116908175 plasminogen activator inhibitor 1 RNA-binding protein-like 8 49354026 49369328 + 116908175 MODEL JAAIVD010000027 pseudo 626151016 Kpnb1 karyopherin subunit beta 1 ENCODES a protein that exhibits enzyme binding (ortholog); Hsp90 protein binding (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN astral microtubule organization (ortholog); establishment of mitotic spindle localization (ortholog); mitotic chromosome movement towards spindle pole (ortholog); ASSOCIATED WITH human immunodeficiency virus infectious disease (ortholog); ovarian carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 57201090 57231610 + 22301074;30032202 116908482 MODEL JAAIVD010000002;XM_032911636 XP_032767527 importin subunit beta-1 protein-coding 626151042 Skic2 SKI2 subunit of superkiller complex ENCODES a protein that exhibits 3'-5' RNA helicase activity (ortholog); INVOLVED IN nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay (ortholog); rescue of stalled ribosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); immunodeficiency 57 (ortholog); trichohepatoenteric syndrome (ortholog); FOUND IN Ski complex (ortholog) 18 7432155 7442582 - 22301074;30032202 116887319 MODEL JAAIVD010000013;XM_032888912 XP_032744803 Skiv2l Ski2 like RNA helicase;helicase SKI2W protein-coding 626151074 Fbxo24 F-box protein 24 INVOLVED IN axoneme assembly (ortholog); chromatin organization (ortholog); cilium organization (ortholog); FOUND IN SCF ubiquitin ligase complex (ortholog) 16 16399640 16409895 + 22301074 116885788 MODEL JAAIVD010000004;XM_032887121 XP_032743012 F-box only protein 24 protein-coding 626151087 LOC116911554 single-stranded DNA-binding protein, mitochondrial-like 10 7286106 7289023 - 116911554 MODEL JAAIVD010000005 pseudo 626151088 LOC116888212 small nuclear ribonucleoprotein G-like X 128281596 128281822 + 116888212 MODEL JAAIVD010000014 pseudo 626151089 Map3k10 mitogen-activated protein kinase kinase kinase 10 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); protein kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN negative regulation of DNA-binding transcription factor activity (ortholog); negative regulation of DNA-templated transcription (ortholog); peptidyl-serine phosphorylation (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; p38 MAPK signaling pathway; FOUND IN cytoplasm (ortholog) 2 168269045 168286822 + 22301074;30032202 116892418 MODEL JAAIVD010000001;XM_032894099 XP_032749990 protein-coding 626151103 LOC116895978 peroxiredoxin-like 2A 3 157553621 157561823 + 116895978 MODEL JAAIVD010000012 pseudo 626151104 Exd1 exonuclease 3'-5' domain containing 1 INVOLVED IN piRNA processing (ortholog); regulatory ncRNA-mediated gene silencing (ortholog); FOUND IN PET complex (ortholog) 5 97693168 97716466 - 22301074 116900596 MODEL JAAIVD010000023;XM_032902313 XP_032758204 piRNA biogenesis protein EXD1 protein-coding 626151118 Mfsd3 major facilitator superfamily domain containing 3 1 249028196 249030663 + 22301074;30032202 116913373 MODEL JAAIVD010000025;XM_032917546;XM_032917555 XP_032773437;XP_032773446 major facilitator superfamily domain-containing protein 3 protein-coding 626151131 Sirt4 sirtuin 4 ENCODES a protein that exhibits lipoamidase activity (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD-dependent protein biotinidase activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); DNA damage response (ortholog); glutamine metabolic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH Cardiomegaly (ortholog); endomyocardial fibrosis (ortholog); Insulin Resistance (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 16 38343191 38349047 + 22301074 116885772 MODEL JAAIVD010000004;XM_032887094;XR_004386043 XP_032742985 NAD-dependent protein lipoamidase sirtuin-4, mitochondrial protein-coding 626151142 Dnah5 dynein axonemal heavy chain 5 ENCODES a protein that exhibits microtubule motor activity (ortholog); INVOLVED IN cilium assembly (ortholog); cilium movement (ortholog); determination of left/right symmetry (ortholog); ASSOCIATED WITH asthma (ortholog); autism spectrum disorder (ortholog); genetic disease (ortholog); FOUND IN 9+0 motile cilium (ortholog); 9+2 motile cilium (ortholog); axonemal dynein complex (ortholog) 3 152289658 152591007 - 22301074;30032202 116897056 MODEL JAAIVD010000012;XM_032898676 XP_032754567 dynein heavy chain 5, axonemal protein-coding 626151225 Rsph14 radial spoke head 14 homolog FOUND IN radial spoke (ortholog) 18 12426389 12500566 + 22301074 116887013 MODEL JAAIVD010000013;XM_032888501 XP_032744392 protein-coding 626151234 LOC116884692 heterogeneous nuclear ribonucleoprotein A3-like 15 63808039 63809700 + 116884692 MODEL JAAIVD010000010 pseudo 626151235 Yod1 YOD1 deubiquitinase ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); K48-linked deubiquitinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); macroautophagy (ortholog); FOUND IN cytoplasm (ortholog) 10 5092592 5099430 - 30032202 116911699 MODEL JAAIVD010000005;XM_032915663 XP_032771554 ubiquitin thioesterase OTU1 protein-coding 626151241 LOC116908071 60S ribosomal protein L12-like 8 77884488 77884931 + 22301074;30032202 116908071 MODEL JAAIVD010000027;XM_032911344 XP_032767235 protein-coding 626151244 LOC116900307 olfactory receptor 8H1-like 5 64014000 64014956 + 22301074;30032202 116900307 MODEL JAAIVD010000023;XM_032902064 XP_032757955 protein-coding 626151247 LOC116885475 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5-like 1 92610939 92611984 - 116885475 MODEL JAAIVD010000025 pseudo 626151248 LOC116892376 uncharacterized LOC116892376 2 167206381 167208145 + 116892376 MODEL JAAIVD010000001;XR_004386950 ncrna 626151254 Ramp1 receptor activity modifying protein 1 ENCODES a protein that exhibits amylin receptor activity (ortholog); calcitonin gene-related peptide binding (ortholog); calcitonin gene-related peptide receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); amylin receptor signaling pathway (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell surface (ortholog); CGRP receptor complex (ortholog); extracellular space (ortholog) 4 163173856 163222253 + 22301074;30032202 116899634 MODEL JAAIVD010000003;XM_032901622 XP_032757513 receptor activity-modifying protein 1 protein-coding 626151261 LOC116888277 ribosyldihydronicotinamide dehydrogenase [quinone]-like 1 81153513 81154764 + 30032202 116888277 MODEL JAAIVD010000025;XM_032889553 XP_032745444 protein-coding 626151266 Srfbp1 serum response factor binding protein 1 ASSOCIATED WITH thoracic aortic aneurysm (ortholog); FOUND IN nucleus (ortholog) 15 79235364 79257574 - 30032202 116884480 MODEL JAAIVD010000010;XM_032885597 XP_032741488 serum response factor-binding protein 1 protein-coding 626151278 LOC116894244 olfactory receptor 14A2-like 2 114486572 114487576 + 22301074;30032202 116894244 MODEL JAAIVD010000001;XM_032895950 XP_032751841 protein-coding 626151281 LOC116893389 eukaryotic translation initiation factor 2D-like 2 169945943 169946802 - 22301074;30032202 116893389 MODEL JAAIVD010000001;XM_032895183 XP_032751074 protein-coding 626151285 Neto1 neuropilin and tolloid like 1 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); INVOLVED IN anterograde axonal transport of neurotransmitter receptor complex (ortholog); memory (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); FOUND IN excitatory synapse (ortholog); glutamatergic synapse (ortholog); postsynaptic density (ortholog) 15 46096223 46204829 - 22301074 116884658 MODEL JAAIVD010000010;XM_032885815;XM_032885816;XM_032885817 XP_032741706;XP_032741707;XP_032741708 neuropilin and tolloid-like protein 1 protein-coding 626151307 LOC116898318 40S ribosomal protein S26-like 4 40081846 40085941 + 116898318 MODEL JAAIVD010000003 pseudo 626151308 LOC116895605 uncharacterized LOC116895605 3 157665797 157667721 - 116895605 MODEL JAAIVD010000012;XR_004387292 ncrna 626151312 Ogfod1 2-oxoglutarate and iron dependent oxygenase domain containing 1 ENCODES a protein that exhibits peptidyl-proline 3-dioxygenase activity (ortholog); peptidyl-proline dioxygenase activity (ortholog); INVOLVED IN cell population proliferation (ortholog); peptidyl-proline hydroxylation (ortholog); protein hydroxylation (ortholog); FOUND IN cytoplasmic stress granule (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 947739 973534 + 22301074;30032202 116886571 MODEL JAAIVD010000011;XM_032888092 XP_032743983 prolyl 3-hydroxylase OGFOD1 protein-coding 626151329 LOC116884027 heterogeneous nuclear ribonucleoprotein A1-like 14 17137479 17138380 + 116884027 MODEL JAAIVD010000009 pseudo 626151330 Adgre1 adhesion G protein-coupled receptor E1 INVOLVED IN cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cell periphery (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 4 88779103 88895277 + 22301074;30032202 116898422 MODEL JAAIVD010000003;XM_032899702 XP_032755593 protein-coding 626151356 LOC116897999 histone H2A.Z-like 4 60375756 60376144 + 116897999 MODEL JAAIVD010000003 pseudo 626151357 LOC116902256 CDK5 and ABL1 enzyme substrate 2-like 5 142478501 142480793 - 22301074;30032202 116902256 MODEL JAAIVD010000023;XM_032904675 XP_032760566 protein-coding 626151364 LOC116888555 nucleolar and spindle-associated protein 1-like X 47921930 47924025 + 22301074;30032202 116888555 MODEL JAAIVD010000014;XM_032889862 XP_032745753 protein-coding 626151369 Eno3 enolase 3 ENCODES a protein that exhibits identical protein binding (ortholog); phosphopyruvate hydratase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN canonical glycolysis (ortholog); response to xenobiotic stimulus (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); genetic disease (ortholog); Glycogen Storage Disease XIII (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); plasma membrane (ortholog) 9 50266150 50273491 + 22301074;30032202 116910489 MODEL JAAIVD010000002;XM_032914376;XM_032914377;XM_032914378 XP_032770267;XP_032770268;XP_032770269 beta-enolase protein-coding 626151391 LOC116898954 SH3 domain-binding glutamic acid-rich protein 4 48451849 48472118 - 30032202 116898954 MODEL JAAIVD010000003;XM_032900370 XP_032756261 protein-coding 626151402 Kcng1 potassium voltage-gated channel modifier subfamily G member 1 ENCODES a protein that exhibits potassium channel regulator activity (ortholog); INVOLVED IN potassium ion transport (ortholog); regulation of potassium ion transmembrane transport (ortholog); regulation of potassium ion transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) 5 149728824 149747370 + 22301074;30032202 116902299 MODEL JAAIVD010000023;XM_032904739 XP_032760630 potassium voltage-gated channel subfamily G member 1 protein-coding 626151409 Ric8b RIC8 guanine nucleotide exchange factor B ENCODES a protein that exhibits G-protein alpha-subunit binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); protein folding chaperone (ortholog); INVOLVED IN G protein-coupled receptor signaling pathway (ortholog); regulation of G protein-coupled receptor signaling pathway (ortholog); sensory perception of smell (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 163432258 163526725 - 30032202 116907419 MODEL JAAIVD010000025;XM_032910385;XM_032910393;XM_032910401;XM_032910408 XP_032766276;XP_032766284;XP_032766292;XP_032766299 synembryn-B protein-coding 626151435 Rnf39 ring finger protein 39 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN cGAS/STING signaling pathway (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); negative regulation of cytoplasmic pattern recognition receptor signaling pathway (ortholog); ASSOCIATED WITH cholangiocarcinoma (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog) 18 9920526 9926163 + 22301074 116887719 MODEL JAAIVD010000013;XM_032889317 XP_032745208 protein-coding 626151443 Rpe65 retinoid isomerohydrolase RPE65 ENCODES a protein that exhibits all-trans-retinyl-ester hydrolase, 11-cis retinol forming activity (ortholog); all-trans-retinyl-palmitate hydrolase, 11-cis retinol forming activity (ortholog); isomerase activity (ortholog); INVOLVED IN camera-type eye development (ortholog); circadian rhythm (ortholog); detection of light stimulus involved in visual perception (ortholog); PARTICIPATES IN altered retinoid cycle metabolic pathway; retinitis pigmentosa pathway; retinoid cycle metabolic pathway; ASSOCIATED WITH adrenocorticotropic hormone deficiency (ortholog); autistic disorder (ortholog); basal cell carcinoma (ortholog); FOUND IN cell body (ortholog); cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog) 3 2135025 2196397 + 30032202 116896120 MODEL JAAIVD010000012;XM_032897084 XP_032752975 retinoid isomerohydrolase protein-coding 626151462 Zfpl1 zinc finger protein like 1 FOUND IN Golgi apparatus (ortholog) 2 1604503 1608510 + 30032202 116890676 MODEL JAAIVD010000001;XM_032891084 XP_032746975 zinc finger protein-like 1 protein-coding 626151474 LOC116908203 dynein light chain 1, cytoplasmic-like 8 65896453 65898935 - 116908203 MODEL JAAIVD010000027 pseudo 626151475 Mthfd2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase ENCODES a protein that exhibits magnesium ion binding (ortholog); methenyltetrahydrofolate cyclohydrolase activity (ortholog); methylenetetrahydrofolate dehydrogenase (NAD+) activity (ortholog); INVOLVED IN formate biosynthetic process (ortholog); tetrahydrofolate interconversion (ortholog); tetrahydrofolate metabolic process (ortholog); PARTICIPATES IN folate cycle metabolic pathway; folate mediated one-carbon metabolic pathway; folate metabolic pathway; ASSOCIATED WITH congestive heart failure (ortholog); COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 6 62911026 62920882 + 22301074;30032202 116903613 MODEL JAAIVD010000024;XM_032906257 XP_032762148 bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial protein-coding 626151486 C1H12orf73 chromosome 1 C12orf73 homolog INVOLVED IN mitochondrial cytochrome c oxidase assembly (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 1 165811698 165815147 + 22301074;30032202 116907650 MODEL JAAIVD010000025;XM_032910733 XP_032766624 uncharacterized protein C12orf73 homolog protein-coding 626151493 Trnal-cag transfer RNA leucine (anticodon CAG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42457908 42457990 - 116884189 MODEL JAAIVD010000009 trna 626151494 LOC116910548 intercellular adhesion molecule 5 9 72832582 72838748 - 22301074;30032202 116910548 MODEL JAAIVD010000002;XM_032914455 XP_032770346 protein-coding 626151504 Ppp1r1c protein phosphatase 1 regulatory inhibitor subunit 1C 5 56927703 57022485 + 22301074;30032202 116900218 MODEL JAAIVD010000023;XM_032901970;XM_032901971;XM_032901973 XP_032757861;XP_032757862;XP_032757864 protein phosphatase 1 regulatory subunit 1C protein-coding 626151515 Cpt1c carnitine palmitoyltransferase 1C ENCODES a protein that exhibits carnitine O-palmitoyltransferase activity (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); INVOLVED IN carnitine metabolic process (ortholog); fatty acid metabolic process (ortholog); regulation of postsynaptic membrane neurotransmitter receptor levels (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH hereditary spastic paraplegia (ortholog); hereditary spastic paraplegia 73 (ortholog); melanoma (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); axon (ortholog); dendrite (ortholog) 2 154570193 154584803 + 30032202 116892181 MODEL JAAIVD010000001;XM_032893699;XM_032893700;XM_032893701;XR_004386925 XP_032749590;XP_032749591;XP_032749592 carnitine O-palmitoyltransferase 1, brain isoform protein-coding 626151547 Stxbp1 syntaxin binding protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); molecular adaptor activity (ortholog); phospholipase binding (ortholog); INVOLVED IN axon target recognition (ortholog); cellular response to type II interferon (ortholog); developmental process involved in reproduction (ortholog); PARTICIPATES IN insulin secretion pathway; synaptic vesicle exocytosis - neurotransmitter release pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Bardet-Biedl syndrome 1 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 2791366 2852502 + 22301074;30032202 116901130 MODEL JAAIVD010000023;XM_032902722;XM_032902723 XP_032758613;XP_032758614 syntaxin-binding protein 1 protein-coding 626151575 Cux2 cut like homeobox 2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN cognition (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); developmental and epileptic encephalopathy (ortholog); developmental and epileptic encephalopathy 67 (ortholog); FOUND IN nucleus (ortholog) 16 31793278 31983606 + 22301074 116885930 MODEL JAAIVD010000004;XM_032887241 XP_032743132 homeobox protein cut-like 2 protein-coding 626151601 LOC116902596 small nucleolar RNA SNORA17 5 142008853 142008975 + 116902596 MODEL JAAIVD010000023 pseudo 626151602 Dad1 defender against cell death 1 ENCODES a protein that exhibits enzyme activator activity (ortholog); INVOLVED IN blastocyst development (ortholog); negative regulation of apoptotic process (ortholog); protein glycosylation (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog); oligosaccharyltransferase complex A (ortholog); oligosaccharyltransferase complex B (ortholog) 12 70756715 70767281 + 22301074;30032202 116913762 MODEL JAAIVD010000007;XM_032918070 XP_032773961 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit DAD1 protein-coding 626151608 LOC116909415 uncharacterized LOC116909415 9 81485493 81487781 - 116909415 MODEL JAAIVD010000002;XR_004389070;XR_004389071 ncrna 626151615 LOC116907874 60S ribosomal protein L39-like 8 84215805 84216085 - 116907874 MODEL JAAIVD010000027 pseudo 626151616 LOC116907741 olfactory receptor 1174 8 16131510 16132505 + 22301074;30032202 116907741 MODEL JAAIVD010000027;XM_032910878 XP_032766769 protein-coding 626151619 Setd2 SET domain containing 2, histone lysine methyltransferase ENCODES a protein that exhibits alpha-tubulin binding (ortholog); histone H3K36 methyltransferase activity (ortholog); protein-lysine N-methyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); autophagosome assembly (ortholog); cell migration involved in vasculogenesis (ortholog); PARTICIPATES IN histone modification pathway; renal cell carcinoma pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Agenesis of Corpus Callosum (ortholog); autism spectrum disorder (ortholog); FOUND IN chromosome (ortholog); nucleus (ortholog) 8 101118455 101202880 + 22301074;30032202 116907675 MODEL JAAIVD010000027;XM_032910769 XP_032766660 histone-lysine N-methyltransferase SETD2 protein-coding 626151644 LOC116914185 U1 spliceosomal RNA 12 75064372 75064535 - 116914185 MODEL JAAIVD010000007;XR_004389725 snrna 626151647 Snrpd2 small nuclear ribonucleoprotein D2 polypeptide ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH systemic lupus erythematosus (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) 2 171469867 171472741 - 22301074;30032202 116892547 MODEL JAAIVD010000001;XM_032894316 XP_032750207 small nuclear ribonucleoprotein Sm D2 protein-coding 626151654 Sowahd sosondowah ankyrin repeat domain family member D ASSOCIATED WITH COVID-19 (ortholog) X 103231102 103232724 + 22301074 116888259 MODEL JAAIVD010000014;XM_032889541 XP_032745432 ankyrin repeat domain-containing protein SOWAHD protein-coding 626151659 LOC116898139 tyrosine-protein kinase ZAP-70 ENCODES a protein that exhibits ATP binding (ortholog); non-membrane spanning protein tyrosine kinase activity (ortholog); phosphotyrosine residue binding (ortholog); INVOLVED IN beta selection (ortholog); immune response (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN phosphatidylinositol 3-kinase class I signaling pathway; ASSOCIATED WITH combined immunodeficiency (ortholog); genetic disease (ortholog); immunodeficiency 48 (ortholog); FOUND IN cell-cell junction (ortholog); cytoplasm (ortholog); cytosol (ortholog) 4 112980216 112992784 + 22301074;30032202 116898139 MODEL JAAIVD010000003;XM_032899515 XP_032755406 protein-coding 626151675 Akr1e2 aldo-keto reductase family 1 member E2 ENCODES a protein that exhibits oxidoreductase activity (ortholog) 14 19849959 19871982 + 30032202 116883679 MODEL JAAIVD010000009;XM_032884890 XP_032740781 1,5-anhydro-D-fructose reductase protein-coding 626151688 Ccng1 cyclin G1 INVOLVED IN mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of apoptotic process (ortholog); response to gravity (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); breast adenocarcinoma (ortholog); breast cancer (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog) 9 23681440 23687856 - 30032202 116908836 MODEL JAAIVD010000002;XM_032912257 XP_032768148 cyclin-G1 protein-coding 626151698 Eif2ak1 eukaryotic translation initiation factor 2 alpha kinase 1 ENCODES a protein that exhibits eukaryotic translation initiation factor 2alpha kinase activity (ortholog); heme binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN acute inflammatory response (ortholog); establishment of localization in cell (ortholog); HRI-mediated signaling (ortholog); ASSOCIATED WITH adult respiratory distress syndrome (ortholog); Chemical and Drug Induced Liver Injury (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 16 9278993 9316435 - 22301074;30032202 116885870 MODEL JAAIVD010000004;XM_032887196 XP_032743087 eukaryotic translation initiation factor 2-alpha kinase 1 protein-coding 626151717 LOC116894502 dynein light chain 1, cytoplasmic-like 2 172814280 172814668 - 116894502 MODEL JAAIVD010000001 pseudo 626151718 C17H16orf86 chromosome 17 C16orf86 homolog 17 25442506 25444417 + 116886060 MODEL JAAIVD010000011;XM_032887367;XM_032887368 XP_032743258;XP_032743259 uncharacterized protein C16orf86 homolog protein-coding 626151729 LOC116901076 stathmin-like 5 143259312 143259755 - 116901076 MODEL JAAIVD010000023 pseudo 626151730 Dhrs3 dehydrogenase/reductase 3 ENCODES a protein that exhibits all-trans-retinol dehydrogenase (NAD+) activity (ortholog); all-trans-retinol dehydrogenase (NADP+) activity (ortholog); INVOLVED IN bone morphogenesis (ortholog); cardiac septum morphogenesis (ortholog); negative regulation of retinoic acid receptor signaling pathway (ortholog); PARTICIPATES IN retinol metabolic pathway; vitamin A deficiency pathway; ASSOCIATED WITH Craniosynostosis Syndrome, Autosomal Recessive (ortholog); Experimental Liver Cirrhosis (ortholog) 1 13901169 13936918 - 30032202 116893055 MODEL JAAIVD010000025;XM_032895020;XM_032895026;XR_004386994 XP_032750911;XP_032750917 short-chain dehydrogenase/reductase 3 protein-coding 626151746 LOC116884644 cytochrome c oxidase subunit 6C-2-like 15 39663684 39664302 + 30032202 116884644 MODEL JAAIVD010000010;XM_032885792 XP_032741683 protein-coding 626151751 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42529965 42530036 + 116884235 MODEL JAAIVD010000009 trna 626151752 LOC116912027 dynein light chain 1, cytoplasmic-like 11 75031475 75034436 + 116912027 MODEL JAAIVD010000006 pseudo 626151753 LOC116913152 60S ribosomal protein L18-like 12 43124654 43125226 + 116913152 MODEL JAAIVD010000007 pseudo 626151754 Malt1 MALT1 paracaspase ENCODES a protein that exhibits endopeptidase activator activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN B cell activation (ortholog); B-1 B cell differentiation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); genetic disease (ortholog); immunodeficiency 12 (ortholog); FOUND IN CBM complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 65788873 65840575 - 22301074 116884488 MODEL JAAIVD010000010;XM_032885609 XP_032741500 mucosa-associated lymphoid tissue lymphoma translocation protein 1 protein-coding 626151775 Csf2 colony stimulating factor 2 ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN cell surface receptor signaling pathway via JAK-STAT (ortholog); cell surface receptor signaling pathway via STAT (ortholog); cellular response to granulocyte macrophage colony-stimulating factor stimulus (ortholog); PARTICIPATES IN Fc epsilon receptor mediated signaling pathway; granulocyte-macrophage colony-stimulating factor signaling pathway; syndecan signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute myeloid leukemia (ortholog); agranulocytosis (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); granulocyte macrophage colony-stimulating factor receptor complex (ortholog) 9 36705511 36707674 - 22301074;30032202 116910146 MODEL JAAIVD010000002;XM_032913995 XP_032769886 granulocyte-macrophage colony-stimulating factor protein-coding 626151783 C3H3orf33 chromosome 3 C3orf33 homolog INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); regulation of DNA-binding transcription factor activity (ortholog); FOUND IN extracellular space (ortholog); mitochondrion (ortholog) 3 91310053 91328154 + 30032202 116896826 MODEL JAAIVD010000012;XM_032898303;XM_032898304 XP_032754194;XP_032754195 protein C3orf33 homolog protein-coding 626151795 LOC116895344 alpha-amylase 1 3 45966915 45976962 + 22301074 116895344 MODEL JAAIVD010000012;XM_032896645 XP_032752536 protein-coding 626151809 Samd4a sterile alpha motif domain containing 4A ENCODES a protein that exhibits translation repressor activity (ortholog); INVOLVED IN positive regulation of translation (ortholog); regulation of postsynapse assembly (ortholog); ASSOCIATED WITH head and neck squamous cell carcinoma (ortholog); substance-related disorder (ortholog); FOUND IN cell junction (ortholog); cytosol (ortholog); fibrillar center (ortholog) 12 75952193 76178001 - 22301074;30032202 116913315 MODEL JAAIVD010000007;XM_032917458;XM_032917459;XM_032917460;XM_032917461;XM_032917462 XP_032773349;XP_032773350;XP_032773351;XP_032773352;XP_032773353 protein Smaug homolog 1 protein-coding 626151832 Csmd1 CUB and Sushi multiple domains 1 INVOLVED IN conditioned place preference (ortholog); female gonad development (ortholog); gene expression (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); autism spectrum disorder (ortholog); autistic disorder (ortholog) 13 66475167 67989590 + 116914273 MODEL JAAIVD010000008;XM_032918494 XP_032774385 CUB and sushi domain-containing protein 1 protein-coding 626151906 LOC116907550 cofilin-1-like 8 99131519 99133158 - 22301074;30032202 116907550 MODEL JAAIVD010000027;XM_032910573 XP_032766464 protein-coding 626151911 Ano2 anoctamin 2 ENCODES a protein that exhibits identical protein binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); protein dimerization activity (ortholog); INVOLVED IN chloride transport (ortholog); establishment of localization in cell (ortholog); FOUND IN glutamatergic synapse (ortholog); neuron projection (ortholog); non-motile cilium (ortholog) 6 21860700 22193246 - 22301074;30032202 116903845 MODEL JAAIVD010000024;XM_032906571 XP_032762462 anoctamin-2 protein-coding 626151938 LOC116906411 small Cajal body-specific RNA 13 7 116128278 116128552 - 116906411 MODEL JAAIVD010000026;XR_004388673 ncrna 626151941 Arl13a ARF like GTPase 13A X 86521353 86541487 + 22301074;30032202 116888042 MODEL JAAIVD010000014;XM_032889440 XP_032745331 ADP ribosylation factor like GTPase 13A;ADP-ribosylation factor-like protein 13A protein-coding 626151950 LOC116912733 uncharacterized LOC116912733 11 68392245 68402275 + 116912733 MODEL JAAIVD010000006;XR_004389475 ncrna 626151954 Gpr62 G protein-coupled receptor 62 ENCODES a protein that exhibits arrestin family protein binding (ortholog); identical protein binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); ligand-independent adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); positive regulation of calcium-mediated signaling (ortholog); FOUND IN endosome (ortholog); plasma membrane (ortholog); receptor complex (ortholog) 8 97763774 97765483 - 22301074;30032202 116907486 MODEL JAAIVD010000027;XM_032910477 XP_032766368 G-protein coupled receptor 62 protein-coding 626151959 Snx17 sorting nexin 17 ENCODES a protein that exhibits low-density lipoprotein particle receptor binding (ortholog); phosphatidylinositol binding (ortholog); INVOLVED IN aorta development (ortholog); cardiac septum development (ortholog); coronary vasculature development (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic vesicle (ortholog); cytosol (ortholog) 7 22887288 22892802 - 22301074;30032202 116905978 MODEL JAAIVD010000026;XM_032908990 XP_032764881 sorting nexin-17 protein-coding 626151978 LOC116912741 prolyl-tRNA synthetase associated domain-containing protein 1 11 97138069 97140348 - 22301074 116912741 MODEL JAAIVD010000006;XM_032916886 XP_032772777 protein-coding 626151984 Isl1 ISL LIM homeobox 1 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); chromatin binding (ortholog); core promoter sequence-specific DNA binding (ortholog); INVOLVED IN atrial septum morphogenesis (ortholog); axon regeneration (ortholog); cardiac cell fate determination (ortholog); ASSOCIATED WITH atrial fibrillation (ortholog); atrial heart septal defect (ortholog); bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); nucleus (ortholog) 3 179828197 179839002 - 1691825;22301074;30032202 116895645 MODEL JAAIVD010000012;X53258;XM_032896849 CAA37349;XP_032752740 Isl-1 insulin gene enhancer binding protein;insulin gene enhancer protein ISL-1 protein-coding 626151994 Rasl11b RAS like family 11 member B ENCODES a protein that exhibits transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog) 11 30985726 30989986 + 22301074 116912598 MODEL JAAIVD010000006;XM_032916721 XP_032772612 ras-like protein family member 11B protein-coding 626152002 Chek1 checkpoint kinase 1 ENCODES a protein that exhibits histone H3T11 kinase activity (ortholog); protein domain specific binding (ortholog); protein kinase activity (ortholog); INVOLVED IN apoptotic process (ortholog); apoptotic process involved in development (ortholog); cellular response to caffeine (ortholog); PARTICIPATES IN G2/M DNA damage checkpoint pathway; p53 signaling pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Hereditary Neoplastic Syndromes (ortholog); male infertility (ortholog); FOUND IN centrosome (ortholog); chromatin (ortholog); chromosome, telomeric region (ortholog) 8 32885417 32905845 - 22301074;30032202 116907652 MODEL JAAIVD010000027;XM_032910742;XM_032910743;XM_032910744 XP_032766633;XP_032766634;XP_032766635 serine/threonine-protein kinase Chk1 protein-coding 626152024 Lsm4 LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated ENCODES a protein that exhibits PH domain binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH atherosclerosis (ortholog); FOUND IN cytosol (ortholog); Lsm2-8 complex (ortholog); membrane (ortholog) 13 12922716 12928198 + 22301074;30032202 116914741 MODEL JAAIVD010000008;XM_032919178 XP_032775069 U6 snRNA-associated Sm-like protein LSm4 protein-coding 626152033 Mypop Myb related transcription factor, partner of profilin ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of transcription by RNA polymerase II (ortholog); FOUND IN nucleus (ortholog) 2 171619983 171630625 - 30032202 116892558 MODEL JAAIVD010000001;XM_032894337 XP_032750228 myb-related transcription factor, partner of profilin protein-coding 626152040 Ceacam20 CEA cell adhesion molecule 20 INVOLVED IN positive regulation of cytokine production (ortholog); response to bacterium (ortholog); ASSOCIATED WITH Ehrlich tumor carcinoma (ortholog); FOUND IN apical plasma membrane (ortholog); microvillus membrane (ortholog) 2 170634632 170655364 - 30032202 116892505 MODEL JAAIVD010000001;XM_032894252 XP_032750143 carcinoembryonic antigen-related cell adhesion molecule 20 protein-coding 626152055 Il4r interleukin 4 receptor ENCODES a protein that exhibits interleukin-4 receptor activity (ortholog); INVOLVED IN defense response to protozoan (ortholog); immunoglobulin mediated immune response (ortholog); interleukin-4-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH acne (ortholog); acute myeloid leukemia (ortholog); allergic conjunctivitis (ortholog); FOUND IN centriolar satellite (ortholog); extracellular space (ortholog); nucleoplasm (ortholog) 2 76354040 76366181 - 22301074;30032202 116891537 MODEL JAAIVD010000001;XM_032892692 XP_032748583 interleukin-4 receptor subunit alpha protein-coding 626152068 LOC116897642 U2 spliceosomal RNA 3 23384319 23384509 + 116897642 MODEL JAAIVD010000012;XR_004387620 snrna 626152071 Stmn1 stathmin 1 ENCODES a protein that exhibits tubulin binding (ortholog); INVOLVED IN axonogenesis (ortholog); establishment of skin barrier (ortholog); hepatocyte growth factor receptor signaling pathway (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); basal cell carcinoma (ortholog); Breast Neoplasms (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); membrane (ortholog) 1 23777409 23783752 - 22301074;30032202 116894755 MODEL JAAIVD010000025;XM_032896424;XM_032896426 XP_032752315;XP_032752317 stathmin protein-coding 626152083 LOC116885899 probable bifunctional dTTP/UTP pyrophosphatase/methyltransferase protein 16 14902431 14905202 + 22301074;30032202 116885899 MODEL JAAIVD010000004;XM_032887218 XP_032743109 protein-coding 626152094 LOC116911759 olfactory receptor 6N1-like 10 52726161 52727105 + 22301074 116911759 MODEL JAAIVD010000005;XM_032915753 XP_032771644 protein-coding 626152097 Set SET nuclear proto-oncogene INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of neuron apoptotic process (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 58 (ortholog); Developmental Disabilities (ortholog); dysgerminoma (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); lipid droplet (ortholog) 5 6664170 6673058 - 22301074;30032202 116901202 MODEL JAAIVD010000023;XM_032902910;XM_032902911 XP_032758801;XP_032758802 protein SET protein-coding 626152112 Tcerg1 transcription elongation regulator 1 ENCODES a protein that exhibits identical protein binding (ortholog); proline-rich region binding (ortholog); RNA polymerase II-specific DNA-binding transcription factor binding (ortholog); INVOLVED IN mRNA processing (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH colorectal cancer (ortholog); FOUND IN nucleoplasm (ortholog) 15 3672524 3731710 + 30032202 116884823 MODEL JAAIVD010000010;XM_032886054;XM_032886055;XM_032886056;XM_032886057;XM_032886058;XM_032886059;XR_004385901 XP_032741945;XP_032741946;XP_032741947;XP_032741948;XP_032741949;XP_032741950 protein-coding 626152151 Slc2a5 solute carrier family 2 member 5 ENCODES a protein that exhibits fructose binding (ortholog); fructose transmembrane transporter activity (ortholog); INVOLVED IN cellular response to fructose stimulus (ortholog); D-glucose transmembrane transport (ortholog); fructose import across plasma membrane (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); long QT syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); plasma membrane (ortholog); sarcolemma (ortholog) 1 10614512 10640186 - 22301074;30032202 116890254 MODEL JAAIVD010000025;XM_032890980 XP_032746871 solute carrier family 2, facilitated glucose transporter member 5 protein-coding 626152166 Sf3b5 splicing factor 3b subunit 5 ENCODES a protein that exhibits RNA binding (ortholog); splicing factor binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog); U12-type spliceosomal complex (ortholog) 2 224204148 224204852 - 22301074;30032202 116893013 MODEL JAAIVD010000001;XM_032894976 XP_032750867 protein-coding 626152171 LOC116891632 vitamin D 25-hydroxylase ENCODES a protein that exhibits D3 vitamins binding (ortholog); heme binding (ortholog); iron ion binding (ortholog); INVOLVED IN calcitriol biosynthetic process from calciol (ortholog); response to cesium ion (ortholog); response to ionizing radiation (ortholog); ASSOCIATED WITH Abdominal Obesity (ortholog); autism spectrum disorder (ortholog); brain infarction (ortholog) 2 86987098 86999558 + 22301074;30032202 116891632 MODEL JAAIVD010000001;XM_032892845 XP_032748736 protein-coding 626152179 LOC116906440 small nucleolar RNA SNORA17 7 79297518 79297649 - 116906440 MODEL JAAIVD010000026;XR_004388700 snorna 626152182 Cspp1 centrosome and spindle pole associated protein 1 INVOLVED IN positive regulation of cell division (ortholog); positive regulation of cytokinesis (ortholog); ASSOCIATED WITH Dandy-Walker syndrome (ortholog); fundus dystrophy (ortholog); genetic disease (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 1 144804333 144918395 + 30032202 116903896 MODEL JAAIVD010000025;XM_032906662 XP_032762553 centrosome and spindle pole-associated protein 1 protein-coding 626152216 LOC116899457 gamma-crystallin B 4 138972281 138974410 - 30032202 116899457 MODEL JAAIVD010000003;XM_032901239;XM_032901240 XP_032757130;XP_032757131 protein-coding 626152227 Ang angiogenin ENCODES a protein that exhibits actin binding (ortholog); copper ion binding (ortholog); heparin binding (ortholog); INVOLVED IN angiogenesis (ortholog); antibacterial humoral response (ortholog); antifungal humoral response (ortholog); ASSOCIATED WITH Acute-Phase Reaction (ortholog); Alzheimer's disease (ortholog); amyotrophic lateral sclerosis type 9 (ortholog); FOUND IN actin cytoskeleton (ortholog); angiogenin-PRI complex (ortholog); basement membrane (ortholog) 12 72208247 72208881 - 22301074;30032202 116913557 MODEL JAAIVD010000007;XM_032917765 XP_032773656 protein-coding 626152232 Znhit1 zinc finger HIT-type containing 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone deacetylase binding (ortholog); INVOLVED IN calcium ion homeostasis (ortholog); chromatin remodeling (ortholog); heart process (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; p53 signaling pathway; FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 16 17032271 17038200 + 30032202 116885439 MODEL JAAIVD010000004;XM_032886721;XM_032886722 XP_032742612;XP_032742613 zinc finger HIT domain-containing protein 1 protein-coding 626152244 LOC116883913 60S ribosomal protein L23a-like 14 1744236 1744746 - 116883913 MODEL JAAIVD010000009 pseudo 626152245 LOC116902484 U6 spliceosomal RNA 5 158762028 158762134 + 116902484 MODEL JAAIVD010000023;XR_004388100 snrna 626152248 LOC116885287 zinc finger protein 39-like 16 14581853 14596941 + 30032202 116885287 MODEL JAAIVD010000004;XM_032886534 XP_032742425 protein-coding 626152257 LOC116888077 interferon alpha-12-like 1 65631220 65631776 - 22301074;30032202 116888077 MODEL JAAIVD010000025;XM_032889453 XP_032745344 protein-coding 626152261 Zhx1 zinc fingers and homeoboxes 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of DNA-templated transcription (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 232370195 232396411 - 22301074;30032202 116911701 MODEL JAAIVD010000025;XM_032915669;XM_032915677;XM_032915684;XM_032915692 XP_032771560;XP_032771568;XP_032771575;XP_032771583 zinc fingers and homeoboxes protein 1 protein-coding 626152275 LOC116885918 40S ribosomal protein SA-like 16 20117801 20128218 + 116885918 MODEL JAAIVD010000004 pseudo 626152276 LOC116895429 chromobox protein homolog 3-like 3 65987761 65988951 - 116895429 MODEL JAAIVD010000012 pseudo 626152277 LOC116914938 zinc finger protein 431-like 13 10029315 10030393 - 30032202 116914938 MODEL JAAIVD010000008;XM_032919364 XP_032775255 protein-coding 626152281 Nrgn neurogranin ENCODES a protein that exhibits calmodulin binding (ortholog); phosphatidic acid binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); INVOLVED IN associative learning (ortholog); positive regulation of long-term synaptic potentiation (ortholog); postsynaptic modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Experimental Seizures (ortholog); hypothyroidism (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); dendritic spine head (ortholog) 8 33710872 33718951 - 22301074 116906978 MODEL JAAIVD010000027;XM_032909899 XP_032765790 protein-coding 626152289 Gstcd glutathione S-transferase C-terminal domain containing INVOLVED IN respiratory system development (ortholog); response to lipopolysaccharide (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 3 25842104 25928826 + 116896234 MODEL JAAIVD010000012;XM_032897296 XP_032753187 glutathione S-transferase C-terminal domain-containing protein protein-coding 626152305 Cd44 CD44 molecule (IN blood group) ENCODES a protein that exhibits cargo receptor activity (ortholog); cytokine binding (ortholog); cytokine receptor activity (ortholog); INVOLVED IN blood vessel maturation (ortholog); branching involved in prostate gland morphogenesis (ortholog); branching involved in ureteric bud morphogenesis (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cell projection (ortholog) 5 80648526 80737153 - 22301074;30032202 116901681 MODEL JAAIVD010000023;XM_032903796;XM_032903797;XM_032903798;XM_032903799;XM_032903800;XM_032903801;XM_032903802;XM_032903803;XM_032903804 XP_032759687;XP_032759688;XP_032759689;XP_032759690;XP_032759691;XP_032759692;XP_032759693;XP_032759694;XP_032759695 CD44 antigen;CD44 molecule (Indian blood group) protein-coding 626152340 LOC116902473 U6 spliceosomal RNA 5 37263964 37264070 + 116902473 MODEL JAAIVD010000023;XR_004388091 snrna 626152343 Elac1 elaC ribonuclease Z 1 ENCODES a protein that exhibits tRNA-specific ribonuclease activity (ortholog); INVOLVED IN rescue of stalled ribosome (ortholog); tRNA 3'-end processing (ortholog); tRNA 3'-terminal CCA addition (ortholog); PARTICIPATES IN tRNA maturation pathway; FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 15 58239950 58256256 + 30032202 116884565 MODEL JAAIVD010000010;XM_032885707 XP_032741598 zinc phosphodiesterase ELAC protein 1 protein-coding 626152352 Fam3a FAM3 metabolism regulating signaling molecule A INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); ATP biosynthetic process (ortholog); calcium ion homeostasis (ortholog) X 128387052 128395562 - 30032202 116888602 MODEL JAAIVD010000014;XM_032889897;XM_032889898;XM_032889900 XP_032745788;XP_032745789;XP_032745791 protein FAM3A protein-coding 626152371 Khdc4 KH domain containing 4, pre-mRNA splicing factor ENCODES a protein that exhibits RNA binding (ortholog); INVOLVED IN mRNA splice site recognition (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 3 64845257 64872008 - 22301074;30032202 116896677 MODEL JAAIVD010000012;XM_032898050;XR_004387355 XP_032753941 KH homology domain-containing protein 4 protein-coding 626152391 LOC116893307 zinc finger protein 431-like 2 151740870 151751273 + 30032202 116893307 MODEL JAAIVD010000001;XM_032895133 XP_032751024 protein-coding 626152400 Lrrc9 leucine rich repeat containing 9 FOUND IN cytoplasm (ortholog) 7 86504628 86577599 + 22301074 116906125 MODEL JAAIVD010000026;XM_032909121 XP_032765012 leucine-rich repeat-containing protein 9 protein-coding 626152434 LOC116888533 signal peptidase complex subunit 3-like X 87493968 87495122 - 116888533 MODEL JAAIVD010000014 pseudo 626152435 Snrpg small nuclear ribonucleoprotein polypeptide G ENCODES a protein that exhibits U1 snRNP binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); spliceosomal snRNP assembly (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); nasopharynx carcinoma (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); cytosol (ortholog); methylosome (ortholog) 6 59928913 59935853 - 22301074;30032202 116903555 MODEL JAAIVD010000024;XM_032906170;XM_032906172 XP_032762061;XP_032762063 small nuclear ribonucleoprotein G protein-coding 626152446 LOC116907833 heat shock protein beta-8-like 8 6253679 6254038 - 30032202 116907833 MODEL JAAIVD010000027;XM_032911018 XP_032766909 protein-coding 626152449 Tmem248 transmembrane protein 248 16 23739634 23763472 - 116885377 MODEL JAAIVD010000004;XM_032886651;XM_032886652;XM_032886653 XP_032742542;XP_032742543;XP_032742544 protein-coding 626152469 Spata16 spermatogenesis associated 16 INVOLVED IN spermatid development (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH male infertility (ortholog); male infertility due to globozoospermia (ortholog); spermatogenic failure (ortholog); FOUND IN Golgi apparatus (ortholog) 3 127547740 127805047 - 22301074;30032202 116895559 MODEL JAAIVD010000012;XM_032896794 XP_032752685 spermatogenesis-associated protein 16 protein-coding 626152481 LOC116902635 U2 spliceosomal RNA 5 48723344 48723531 + 116902635 MODEL JAAIVD010000023;XR_004388212 snrna 626152484 Trnar-gcg transfer RNA arginine (anticodon GCG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889666 MODEL JAAIVD010000045 trna 626152485 Cyria CYFIP related Rac1 interactor A ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 7 32099417 32166598 - 22301074;30032202 116904883 MODEL JAAIVD010000026;XM_032907483 XP_032763374 protein FAM49A protein-coding 626152500 Wrn WRN RecQ like helicase ENCODES a protein that exhibits 3'-5' DNA helicase activity (ortholog); 3'-5' exonuclease activity (ortholog); 3'-flap-structured DNA binding (ortholog); INVOLVED IN base-excision repair (ortholog); cellular response to gamma radiation (ortholog); cellular response to starvation (ortholog); ASSOCIATED WITH breast cancer (ortholog); coronary artery disease (ortholog); diffuse scleroderma (ortholog); FOUND IN centrosome (ortholog); chromosome, telomeric region (ortholog); nuclear speck (ortholog) 13 53593162 53728367 + 22301074;30032202 116914304 MODEL JAAIVD010000008;XM_032918546 XP_032774437 Werner syndrome ATP-dependent helicase protein-coding 626152538 Wdpcp WD repeat containing planar cell polarity effector ENCODES a protein that exhibits phosphatidylinositol binding (ortholog); INVOLVED IN auditory receptor cell morphogenesis (ortholog); camera-type eye development (ortholog); cilium assembly (ortholog); ASSOCIATED WITH Bardet-Biedl syndrome (ortholog); Bardet-Biedl syndrome 1 (ortholog); Bardet-Biedl syndrome 15 (ortholog); FOUND IN axonemal basal plate (ortholog) 11 94890263 95116173 - 22301074;30032202 116912317 MODEL JAAIVD010000006;XM_032916336 XP_032772227 WD repeat-containing and planar cell polarity effector protein fritz homolog protein-coding 626152558 LOC116896277 adenosylhomocysteinase-like 3 31984964 31987166 + 116896277 MODEL JAAIVD010000012 pseudo 626152559 Rrp8 ribosomal RNA processing 8 INVOLVED IN cellular response to glucose starvation (ortholog); energy homeostasis (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); FOUND IN chromatin silencing complex (ortholog); cytosol (ortholog); eNoSc complex (ortholog) 2 104573904 104578307 - 22301074;30032202 116891824 MODEL JAAIVD010000001;XM_032893189 XP_032749080 ribosomal RNA-processing protein 8 protein-coding 626152570 Cdk6 cyclin dependent kinase 6 ENCODES a protein that exhibits ATP binding (ortholog); cyclin binding (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); INVOLVED IN cell dedifferentiation (ortholog); DNA damage response (ortholog); G1/S transition of mitotic cell cycle (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); anemia (ortholog); FOUND IN centrosome (ortholog); cyclin D1-CDK6 complex (ortholog); cyclin D2-CDK6 complex (ortholog) 6 135606240 135786685 + 22301074;30032202 116904112 MODEL JAAIVD010000024;XM_032906991 XP_032762882 cyclin-dependent kinase 6 protein-coding 626152582 Oxtr oxytocin receptor ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); oxytocin receptor activity (ortholog); peptide hormone binding (ortholog); INVOLVED IN digestive tract development (ortholog); eating behavior (ortholog); ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphai family; G protein mediated signaling pathway via Galphaq family; oxytocin signaling pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); anxiety disorder (ortholog); FOUND IN adherens junction (ortholog); apical plasma membrane (ortholog); microvillus (ortholog) 6 34029510 34043339 + 22301074;30032202 116904638 MODEL JAAIVD010000024;XM_032907431 XP_032763322 protein-coding 626152588 Usp38 ubiquitin specific peptidase 38 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN antiviral innate immune response (ortholog); G1/S transition of mitotic cell cycle (ortholog); negative regulation of innate immune response (ortholog); FOUND IN cytoplasm (ortholog) 17 19076259 19106780 + 22301074;30032202 116886137 MODEL JAAIVD010000011;XM_032887487 XP_032743378 ubiquitin carboxyl-terminal hydrolase 38 protein-coding 626152602 Fam234b family with sequence similarity 234 member B 6 14193295 14232339 - 22301074 116903160 MODEL JAAIVD010000024;XM_032905528 XP_032761419 protein FAM234B protein-coding 626152619 Furin furin, paired basic amino acid cleaving enzyme ENCODES a protein that exhibits endopeptidase activator activity (ortholog); endopeptidase activity (ortholog); heparan sulfate binding (ortholog); INVOLVED IN blastocyst formation (ortholog); cytokine precursor processing (ortholog); dibasic protein processing (ortholog); PARTICIPATES IN glypican signaling pathway; hypoxia inducible factor pathway; Notch signaling pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); arteriosclerosis (ortholog); carcinoma (ortholog); FOUND IN cell surface (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 2 119842424 119855895 + 22301074;30032202 116891915 MODEL JAAIVD010000001;XM_032893339;XM_032893340 XP_032749230;XP_032749231 protein-coding 626152642 LOC116891981 cytochrome P450 2J5-like 1 59232594 59251038 - 116891981 MODEL JAAIVD010000025 pseudo 626152643 LOC116906319 U6 spliceosomal RNA 7 25488450 25488556 + 116906319 MODEL JAAIVD010000026;XR_004388606 snrna 626152646 Paxip1 PAX interacting protein 1 INVOLVED IN adipose tissue development (ortholog); chorion development (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN histone methyltransferase complex (ortholog); MLL3/4 complex (ortholog); nucleus (ortholog) 6 156613816 156664878 - 30032202 116904231 MODEL JAAIVD010000024;XM_032907173 XP_032763064 PAX-interacting protein 1 protein-coding 626152671 Aqp9 aquaporin 9 ENCODES a protein that exhibits channel activity (ortholog); glycerol channel activity (ortholog); hydrogen peroxide channel activity (ortholog); INVOLVED IN amine transport (ortholog); canalicular bile acid transport (ortholog); cellular response to cAMP (ortholog); PARTICIPATES IN water transport pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); acute promyelocytic leukemia (ortholog); Arsenic Poisoning (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 8 65438931 65478977 - 30032202;35352592 116907850 MODEL AB013112;JAAIVD010000027;XM_032911040 BAA33680;XP_032766931 aquaporin aquaporin-9 protein-coding 626152684 LOC116913075 PHD finger protein 11-like 12 64994376 65010696 + 30032202 116913075 MODEL JAAIVD010000007;XM_032917208 XP_032773099 protein-coding 626152698 LOC116907764 inhibitor of carbonic anhydrase 8 94555310 94584777 - 22301074;30032202 116907764 MODEL JAAIVD010000027;XM_032910903 XP_032766794 protein-coding 626152716 LOC116907962 olfactory receptor 7E24-like 8 15427393 15428331 + 22301074;30032202 116907962 MODEL JAAIVD010000027;XM_032911188 XP_032767079 protein-coding 626152719 Colgalt1 collagen beta(1-O)galactosyltransferase 1 ENCODES a protein that exhibits procollagen galactosyltransferase activity (ortholog); INVOLVED IN positive regulation of collagen fibril organization (ortholog); protein O-linked glycosylation (ortholog); ASSOCIATED WITH brain small vessel disease 3 (ortholog); genetic disease (ortholog); vascular dementia (ortholog); FOUND IN endoplasmic reticulum lumen (ortholog) 13 13343674 13355310 - 30032202 116915044 MODEL JAAIVD010000008;XM_032919456 XP_032775347 procollagen galactosyltransferase 1 protein-coding 626152735 Srms src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites ENCODES a protein that exhibits protein tyrosine kinase activity (ortholog); INVOLVED IN cellular response to nutrient levels (ortholog); negative regulation of TORC1 signaling (ortholog); peptidyl-tyrosine autophosphorylation (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 5 158305219 158311826 - 22301074;30032202 116900799 MODEL JAAIVD010000023;XM_032902510 XP_032758401 tyrosine-protein kinase Srms protein-coding 626152747 Ap1m2 adaptor related protein complex 1 subunit mu 2 FOUND IN cytosol (ortholog) 8 17560119 17577299 - 22301074;30032202 116907105 MODEL JAAIVD010000027;XM_032910073;XM_032910074 XP_032765964;XP_032765965 AP-1 complex subunit mu-2 protein-coding 626152767 LOC116887596 H-2 class I histocompatibility antigen, Q7 alpha chain-like 18 9284400 9294218 - 30032202 116887596 MODEL JAAIVD010000013;XM_032889218 XP_032745109 protein-coding 626152777 LOC116902625 small nucleolar SNORD12/SNORD106 5 150911230 150911320 - 116902625 MODEL JAAIVD010000023;XR_004388202 snorna 626152780 Pde6h phosphodiesterase 6H INVOLVED IN positive regulation of epidermal growth factor receptor signaling pathway (ortholog); positive regulation of G protein-coupled receptor signaling pathway (ortholog); positive regulation of MAPK cascade (ortholog); PARTICIPATES IN visual phototransduction pathway; ASSOCIATED WITH color blindness (ortholog); cone-rod dystrophy 14 (ortholog); fundus dystrophy (ortholog) 6 12457868 12463114 - 22301074;30032202 116904532 MODEL JAAIVD010000024;XM_032907324 XP_032763215 retinal cone rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit gamma protein-coding 626152787 LOC116900263 olfactory receptor 5M11-like 5 63212003 63212947 - 22301074;30032202 116900263 MODEL JAAIVD010000023;XM_032902015 XP_032757906 protein-coding 626152790 Spart spartin ENCODES a protein that exhibits lipid binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN adipose tissue development (ortholog); cell division (ortholog); lipid droplet organization (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); esophagus adenocarcinoma (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); lipid droplet (ortholog) 3 99297087 99322247 - 30032202 116896863 MODEL JAAIVD010000012;XM_032898384;XM_032898385;XM_032898386 XP_032754275;XP_032754276;XP_032754277 protein-coding 626152809 LOC116895508 importin subunit alpha-1-like 3 111257590 111259291 - 22301074;30032202 116895508 MODEL JAAIVD010000012;XM_032896757 XP_032752648 protein-coding 626152813 LOC116885042 small nucleolar RNA SNORA17 15 42406496 42406627 + 116885042 MODEL JAAIVD010000010;XR_004385928 snorna 626152816 C2cd5 C2 calcium dependent domain containing 5 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); intracellular protein transmembrane transport (ortholog); positive regulation of D-glucose import (ortholog); FOUND IN cell cortex (ortholog); centriolar satellite (ortholog); cytoplasmic vesicle membrane (ortholog) 6 773896 860328 - 30032202 116903072 MODEL JAAIVD010000024;XM_032905372;XM_032905373;XM_032905374;XM_032905375;XM_032905376;XM_032905377;XM_032905378;XM_032905379;XM_032905380;XM_032905381;XM_032905382;XM_032905383;XM_032905384;XM_032905385;XM_032905386;XM_032905387;XM_032905388;XM_032905389 XP_032761263;XP_032761264;XP_032761265;XP_032761266;XP_032761267;XP_032761268;XP_032761269;XP_032761270;XP_032761271;XP_032761272;XP_032761273;XP_032761274;XP_032761275;XP_032761276;XP_032761277;XP_032761278;XP_032761279;XP_032761280 C2 domain-containing protein 5 protein-coding 626152874 LOC116912357 UDP-glucuronosyltransferase 2B1-like 11 1841634 1854761 + 116912357 MODEL JAAIVD010000006 pseudo 626152875 LOC116895884 SPRY domain-containing protein 7-like 3 111014290 111015074 + 116895884 MODEL JAAIVD010000012 pseudo 626152876 LOC116887637 COBW domain-containing protein 1-like 18 11213379 11222897 - 116887637 MODEL JAAIVD010000013 pseudo 626152877 Zc3h10 zinc finger CCCH-type containing 10 ENCODES a protein that exhibits miRNA binding (ortholog); INVOLVED IN negative regulation of miRNA processing (ortholog); post-transcriptional regulation of gene expression (ortholog); ASSOCIATED WITH hyperglycemia (ortholog); Insulin Resistance (ortholog); obesity (ortholog); FOUND IN nucleus (ortholog) 1 156014603 156016582 - 22301074 116906214 MODEL JAAIVD010000025;XM_032909153 XP_032765044 zinc finger CCCH domain-containing protein 10 protein-coding 626152882 Sp5 Sp5 transcription factor ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN bone morphogenesis (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); post-anal tail morphogenesis (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 5 47793350 47796159 + 30032202 116900190 MODEL JAAIVD010000023;XM_032901951 XP_032757842 transcription factor Sp5 protein-coding 626152888 Fam221b family with sequence similarity 221 member B 1 2833217 2842042 + 116885885 MODEL JAAIVD010000025;XM_032887208 XP_032743099 protein FAM221B protein-coding 626152899 Mrps17 mitochondrial ribosomal protein S17 FOUND IN mitochondrial small ribosomal subunit (ortholog); mitochondrion (ortholog) 16 24249179 24251048 - 22301074;30032202 116885792 MODEL JAAIVD010000004;XM_032887124 XP_032743015 28S ribosomal protein S17, mitochondrial protein-coding 626152906 LOC116896409 chitinase-like protein 3 3 52037704 52094852 + 22301074;30032202 116896409 MODEL JAAIVD010000012;XM_032897553 XP_032753444 protein-coding 626152915 LOC116888826 melanoma-associated antigen 10-like X 68274804 68276203 - 30032202 116888826 MODEL JAAIVD010000014;XM_032890102 XP_032745993 protein-coding 626152920 Prkaca protein kinase cAMP-activated catalytic subunit alpha ENCODES a protein that exhibits ATP binding (ortholog); cAMP-dependent protein kinase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cAMP/PKA signal transduction (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); adrenal cortical adenoma (ortholog); Adrenal Gland Neoplasms (ortholog); FOUND IN acrosomal vesicle (ortholog); axoneme (ortholog); cAMP-dependent protein kinase complex (ortholog) 17 16287765 16311232 - 1711374;22301074;30032202 116886628 MODEL JAAIVD010000011;X57986;XM_032888134 CAA41052;XP_032744025 cAMP-dependent protein kinase catalytic subunit alpha protein-coding 626152933 LOC116906782 olfactory receptor 7A17-like 1 156714740 156715696 - 22301074;30032202 116906782 MODEL JAAIVD010000025;XM_032909639 XP_032765530 protein-coding 626152936 LOC116908101 14-3-3 protein zeta/delta-like 8 48942653 48944514 + 30032202 116908101 MODEL JAAIVD010000027;XM_032911380 XP_032767271 protein-coding 626152941 LOC116891146 cytochrome P450 2C70 2 39294419 39324200 - 22301074;30032202 116891146 MODEL JAAIVD010000001;XM_032891895;XM_032891896;XM_032891897 XP_032747786;XP_032747787;XP_032747788 protein-coding 626152963 LOC116892052 vomeronasal type-1 receptor 4-like 2 143706062 143707023 + 22301074;30032202 116892052 MODEL JAAIVD010000001;XM_032893523 XP_032749414 protein-coding 626152967 Ccdc32 coiled-coil domain containing 32 INVOLVED IN cilium organization (ortholog); head development (ortholog); regulation of clathrin-dependent endocytosis (ortholog); ASSOCIATED WITH Cardiofacioneurodevelopmental Syndrome (ortholog); FOUND IN clathrin-coated pit (ortholog) 5 97189056 97201428 - 30032202 116901792 MODEL JAAIVD010000023;XM_032903946 XP_032759837 coiled-coil domain-containing protein 32 protein-coding 626152975 LOC116889028 solute carrier family 25 member 39-like X 53670479 53671474 - 116889028 MODEL JAAIVD010000014 pseudo 626152976 LOC116890516 small nucleolar RNA SNORA17 1 205291021 205291152 - 116890516 MODEL JAAIVD010000025;XR_004386698 snorna 626152979 LOC116912879 peptidyl-prolyl cis-trans isomerase D-like 11 98065513 98066592 + 116912879 MODEL JAAIVD010000006 pseudo 626152980 LOC116913034 U4 spliceosomal RNA 11 7250818 7250959 - 116913034 MODEL JAAIVD010000006;XR_004389572 snrna 626152983 LOC116908170 transcription factor BTF3-like 8 46421026 46429162 + 116908170 MODEL JAAIVD010000027 pseudo 626152984 Sgca sarcoglycan alpha INVOLVED IN response to denervation involved in regulation of muscle adaptation (ortholog); skeletal muscle tissue regeneration (ortholog); ASSOCIATED WITH arrhythmogenic right ventricular cardiomyopathy (ortholog); atrial fibrillation (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); FOUND IN cell-cell junction (ortholog); dystroglycan complex (ortholog); membrane raft (ortholog) 9 59410229 59419770 + 22301074;30032202 116910327 MODEL JAAIVD010000002;XM_032914187 XP_032770078 alpha-sarcoglycan protein-coding 626152996 LOC116897009 selection and upkeep of intraepithelial T-cells protein 3-like 1 87303287 87315858 + 30032202 116897009 MODEL JAAIVD010000025;XM_032898651 XP_032754542 protein-coding 626153001 LOC116884381 ribosome biogenesis protein NSA2 homolog 15 52517647 52522417 - 116884381 MODEL JAAIVD010000010 pseudo 626153002 P4ha3 prolyl 4-hydroxylase subunit alpha 3 ENCODES a protein that exhibits procollagen-proline 4-dioxygenase activity (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway 2 98579844 98615791 + 22301074;30032202 116891737 MODEL JAAIVD010000001;XM_032893040;XM_032893041 XP_032748931;XP_032748932 prolyl 4-hydroxylase subunit alpha-3 protein-coding 626153022 Net1 neuroepithelial cell transforming 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to ionizing radiation (ortholog); myoblast migration (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Ependymomas (ortholog); long QT syndrome (ortholog); FOUND IN nucleus (ortholog); plasma membrane (ortholog) 14 18200930 18230184 - 22301074;30032202 116883474 MODEL JAAIVD010000009;XM_032884628;XM_032884629 XP_032740519;XP_032740520 neuroepithelial cell-transforming gene 1 protein protein-coding 626153041 Sugp1 SURP and G-patch domain containing 1 ENCODES a protein that exhibits mRNA binding (ortholog); FOUND IN nucleoplasm (ortholog) 13 12310041 12338369 + 22301074;30032202 116914887 MODEL JAAIVD010000008;XM_032919327;XM_032919329 XP_032775218;XP_032775220 SURP and G-patch domain-containing protein 1 protein-coding 626153062 LOC116891052 COBW domain-containing protein 1 2 25039912 25080950 - 30032202 116891052 MODEL JAAIVD010000001;XM_032891742;XM_032891743;XM_032891744;XM_032891745;XM_032891746;XM_032891747 XP_032747633;XP_032747634;XP_032747635;XP_032747636;XP_032747637;XP_032747638 protein-coding 626153088 Prss56 serine protease 56 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN camera-type eye development (ortholog); proteolysis (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); cholangiocarcinoma (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 4 159310846 159315879 + 22301074 116898254 MODEL JAAIVD010000003;XM_032899603 XP_032755494 protein-coding 626153104 LOC116907822 40S ribosomal protein S9-like 8 59499081 59499546 + 116907822 MODEL JAAIVD010000027 pseudo 626153105 Sgcb sarcoglycan beta INVOLVED IN cardiac muscle cell development (ortholog); gene expression (ortholog); glucose homeostasis (ortholog); ASSOCIATED WITH autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2E (ortholog); cardiomyopathy (ortholog); FOUND IN dystroglycan complex (ortholog); dystrophin-associated glycoprotein complex (ortholog); plasma membrane (ortholog) 11 30421099 30436193 - 22301074;30032202 116912184 MODEL JAAIVD010000006;XM_032916119;XM_032916120 XP_032772010;XP_032772011 beta-sarcoglycan protein-coding 626153118 LOC116886396 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 17 40459254 40459616 - 22301074;30032202 116886396 MODEL JAAIVD010000011;XM_032887865 XP_032743756 protein-coding 626153122 LOC116902993 taste receptor type 2 member 136 6 16574173 16575165 - 22301074;30032202 116902993 MODEL JAAIVD010000024;XM_032905308 XP_032761199 protein-coding 626153125 Ucn3 urocortin 3 ENCODES a protein that exhibits corticotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cellular response to hypoxia (ortholog); cellular response to nutrient levels (ortholog); PARTICIPATES IN corticotropin-releasing hormone signaling pathway; ASSOCIATED WITH Inflammation (ortholog); lung disease (ortholog); FOUND IN axon (ortholog); axon terminus (ortholog); varicosity (ortholog) 14 18255543 18256459 - 22301074;30032202 116883739 MODEL JAAIVD010000009;XM_032884970 XP_032740861 urocortin-3 protein-coding 626153129 LOC116893356 zinc finger protein 33B-like 2 160198663 160210636 - 22301074 116893356 MODEL JAAIVD010000001;XM_032895161 XP_032751052 protein-coding 626153137 Leo1 LEO1 component of Paf1/RNA polymerase II complex INVOLVED IN endodermal cell fate commitment (ortholog); mRNA 3'-end processing (ortholog); negative regulation of myeloid cell differentiation (ortholog); PARTICIPATES IN RNA polymerase I transcription pathway; RNA polymerase II transcription elongation pathway; ASSOCIATED WITH spermatogenic failure 57 (ortholog); FOUND IN Cdc73/Paf1 complex (ortholog); centrosome (ortholog); fibrillar center (ortholog) 8 69728600 69752937 + 22301074;30032202 116906801 MODEL JAAIVD010000027;XM_032909673;XM_032909674 XP_032765564;XP_032765565 LEO1 homolog, Paf1/RNA polymerase II complex component;RNA polymerase-associated protein LEO1 protein-coding 626153157 LOC116912489 zinc finger protein 431-like 11 18833207 18851070 - 30032202 116912489 MODEL JAAIVD010000006;XM_032916566;XM_032916567;XM_032916568;XM_032916569;XM_032916570;XM_032916571;XM_032916572;XM_032916573;XM_032916574 XP_032772457;XP_032772458;XP_032772459;XP_032772460;XP_032772461;XP_032772462;XP_032772463;XP_032772464;XP_032772465 putative KRAB domain-containing protein ZNF788;zinc finger protein 120-like protein-coding 626153192 LOC116893325 transient receptor potential cation channel subfamily M member 4-like 2 154234205 154256185 + 116893325 MODEL JAAIVD010000001 pseudo 626153193 LOC116903245 40S ribosomal protein S15a-like 1 34591339 34591828 - 116903245 MODEL JAAIVD010000025 pseudo 626153194 ND6 NADH dehydrogenase subunit 6 MT 13534 14052 - 7751809 B7SE72 REVIEWED EU273707 ABX45244;YP_002791027 protein-coding 626153195 Glrx3 glutaredoxin 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase C binding (ortholog); INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); FOUND IN dendrite (ortholog); iron-sulfur cluster assembly complex (ortholog); Z disc (ortholog) 2 64481121 64513093 - 116891375 MODEL JAAIVD010000001;XM_032892376 XP_032748267 glutaredoxin-3 protein-coding 626153210 Cacng6 calcium voltage-gated channel auxiliary subunit gamma 6 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); ASSOCIATED WITH aspirin-induced respiratory disease (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) 2 178059347 178072140 + 22301074;30032202 116894557 MODEL JAAIVD010000001;XM_032896266;XM_032896268 XP_032752157;XP_032752159 voltage-dependent calcium channel gamma-6 subunit protein-coding 626153219 LOC116897633 small nucleolar RNA U109 3 206215095 206215229 - 116897633 MODEL JAAIVD010000012;XR_004387612 snorna 626153222 LOC116890449 small nucleolar RNA SNORD103/SNORD85 1 27578565 27578638 - 116890449 MODEL JAAIVD010000025;XR_004386641 snorna 626153225 Foxc2 forkhead box C2 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity (ortholog); INVOLVED IN artery morphogenesis (ortholog); blood vessel development (ortholog); blood vessel diameter maintenance (ortholog); ASSOCIATED WITH Cardiovascular Abnormalities (ortholog); congenital diaphragmatic hernia (ortholog); congestive heart failure (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 17 40767543 40770231 + 30032202 116886332 MODEL JAAIVD010000011;XM_032887785 XP_032743676 forkhead box protein C2 protein-coding 626153230 Mrpl18 mitochondrial ribosomal protein L18 ENCODES a protein that exhibits 5S rRNA binding (ortholog); INVOLVED IN rRNA import into mitochondrion (ortholog); FOUND IN mitochondrial large ribosomal subunit (ortholog); mitochondrion (ortholog) 2 191639238 191644186 - 22301074;30032202 116892836 MODEL JAAIVD010000001;XM_032894722;XM_032894723 XP_032750613;XP_032750614 39S ribosomal protein L18, mitochondrial protein-coding 626153244 Foxp2 forkhead box P2 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN camera-type eye development (ortholog); caudate nucleus development (ortholog); cerebellar Purkinje cell differentiation (ortholog); ASSOCIATED WITH adenoid cystic carcinoma (ortholog); apraxia (ortholog); articulation disorder (ortholog); FOUND IN nucleus (ortholog) 6 123489638 123955415 - 30032202 116904065 MODEL JAAIVD010000024;XM_032906928;XM_032906929;XM_032906930 XP_032762819;XP_032762820;XP_032762821 forkhead box protein P2 protein-coding 626153274 Agtr2 angiotensin II receptor type 2 ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); transcription factor binding (ortholog); INVOLVED IN angiotensin-activated signaling pathway (ortholog); angiotensin-mediated vasodilation involved in regulation of systemic arterial blood pressure (ortholog); brain renin-angiotensin system (ortholog); PARTICIPATES IN angiotensin II signaling pathway; angiotensin II signaling pathway via AT2 receptor; angiotensin III signaling pathway; ASSOCIATED WITH AIDS-Associated Nephropathy (ortholog); Alveolar Bone Loss (ortholog); asthma (ortholog); FOUND IN perinuclear region of cytoplasm (ortholog) 1 144165531 144169704 + 22301074;30032202;8227011 116889650 MODEL D16840;JAAIVD010000025;XM_032890558;XM_032890562 BAA04116;XP_032746449;XP_032746453 angiotensin II type 2 receptor;type-2 angiotensin II receptor protein-coding 626153286 Lcmt1 leucine carboxyl methyltransferase 1 ENCODES a protein that exhibits protein C-terminal carboxyl O-methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN C-terminal protein methylation (ortholog); negative regulation of protein-containing complex assembly (ortholog); protein methylation (ortholog); ASSOCIATED WITH Embryo Loss (ortholog); FOUND IN cytosol (ortholog) 2 78435234 78489742 - 30032202 116891545 MODEL JAAIVD010000001;XM_032892703;XM_032892704 XP_032748594;XP_032748595 protein-coding 626153305 Bola2b bolA family member 2B INVOLVED IN [2Fe-2S] cluster assembly (ortholog); cell redox homeostasis (ortholog); intracellular iron ion homeostasis (ortholog); FOUND IN cytoplasm (ortholog); iron-sulfur cluster assembly complex (ortholog); nucleus (ortholog) 2 75207557 75208644 - 30032202 116891514 MODEL JAAIVD010000001;XM_032892651 XP_032748542 bolA-like protein 2 protein-coding 626153312 Lars1 leucyl-tRNA synthetase 1 ENCODES a protein that exhibits aminoacyl-tRNA deacylase activity (ortholog); glutamine-tRNA ligase activity (ortholog); GTPase activator activity (ortholog); INVOLVED IN cellular response to amino acid starvation (ortholog); cellular response to amino acid stimulus (ortholog); cellular response to L-leucine (ortholog); ASSOCIATED WITH infantile liver failure syndrome 1 (ortholog); microcephaly (ortholog); sensorineural hearing loss (ortholog); FOUND IN aminoacyl-tRNA synthetase multienzyme complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 15 3382335 3430686 - 22301074;30032202 116884300 MODEL JAAIVD010000010;XM_032885400 XP_032741291 leucine--tRNA ligase, cytoplasmic protein-coding 626153347 Pphln1 periphilin 1 INVOLVED IN constitutive heterochromatin formation (ortholog); negative regulation of gene expression, epigenetic (ortholog); protein localization to heterochromatin (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nucleoplasm (ortholog) 1 266313446 266402775 + 30032202 116884283 MODEL JAAIVD010000025;XM_032885376;XM_032885384 XP_032741267;XP_032741275 periphilin-1 protein-coding 626153364 LOC116898354 keratin-associated protein 13-2-like 4 55087250 55088294 + 116898354 MODEL JAAIVD010000003 pseudo 626153365 Rnf122 ring finger protein 122 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN negative regulation of mitochondrial membrane potential (ortholog); positive regulation of apoptotic process (ortholog); proteasome-mediated ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 13 55784670 55801783 - 116914861 MODEL JAAIVD010000008;XM_032919310 XP_032775201 protein-coding 626153375 LOC116902581 small nucleolar RNA SNORA17 5 153337878 153337994 - 116902581 MODEL JAAIVD010000023 pseudo 626153376 Pacsin2 protein kinase C and casein kinase substrate in neurons 2 ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); identical protein binding (ortholog); lipid binding (ortholog); INVOLVED IN caveola assembly (ortholog); caveolin-mediated endocytosis (ortholog); cell migration involved in sprouting angiogenesis (ortholog); ASSOCIATED WITH juvenile rheumatoid arthritis (ortholog); myoepithelioma (ortholog); FOUND IN adherens junction (ortholog); caveola (ortholog); cell-cell junction (ortholog) 1 252781927 252875005 - 22301074;30032202 116914426 MODEL JAAIVD010000025;XM_032918715 XP_032774606 protein kinase C and casein kinase substrate in neurons protein 2 protein-coding 626153392 LOC116915094 beta-defensin 12 13 64558891 64561285 - 22301074 116915094 MODEL JAAIVD010000008;XM_032919521 XP_032775412 protein-coding 626153398 Agtrap angiotensin II receptor associated protein ENCODES a protein that exhibits angiotensin type II receptor activity (ortholog); identical protein binding (ortholog); INVOLVED IN regulation of blood pressure (ortholog); response to hypoxia (ortholog); PARTICIPATES IN angiotensin II signaling pathway via AT1 receptor; ASSOCIATED WITH acquired metabolic disease (ortholog); Cardiomegaly (ortholog); hypertension (ortholog); FOUND IN cell cortex (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 1 12691876 12700517 + 22301074;30032202 116892883 MODEL JAAIVD010000025;XM_032894794 XP_032750685 type-1 angiotensin II receptor-associated protein protein-coding 626153407 Zbtb10 zinc finger and BTB domain containing 10 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromosome, telomeric region (ortholog); nucleoplasm (ortholog) 3 143357920 143391347 + 22301074;30032202 116897028 MODEL JAAIVD010000012;XM_032898646 XP_032754537 zinc finger and BTB domain-containing protein 10 protein-coding 626153417 Uba6 ubiquitin like modifier activating enzyme 6 ENCODES a protein that exhibits FAT10 activating enzyme activity (ortholog); ubiquitin activating enzyme activity (ortholog); INVOLVED IN amygdala development (ortholog); dendritic spine development (ortholog); hippocampus development (ortholog); FOUND IN cytoplasm (ortholog) 11 495540 550981 - 30032202 116912418 MODEL JAAIVD010000006;XM_032916483;XM_032916484 XP_032772374;XP_032772375 ubiquitin-like modifier-activating enzyme 6 protein-coding 626153457 LOC116889427 U6 spliceosomal RNA X 9506166 9506270 - 116889427 MODEL JAAIVD010000014;XR_004386392 snrna 626153460 Eefsec eukaryotic elongation factor, selenocysteine-tRNA specific ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); ribonucleoprotein complex binding (ortholog); INVOLVED IN selenocysteine incorporation (ortholog); ASSOCIATED WITH chronic obstructive pulmonary disease (ortholog); infantile cerebral and cerebellar atrophy with postnatal progressive microcephaly (ortholog); intellectual disability (ortholog); FOUND IN ribonucleoprotein complex (ortholog) 6 57873514 58066290 + 22301074;30032202 116903525 MODEL JAAIVD010000024;XM_032906135 XP_032762026 selenocysteine-specific elongation factor protein-coding 626153471 Gpd2 glycerol-3-phosphate dehydrogenase 2 ENCODES a protein that exhibits glycerol-3-phosphate dehydrogenase (quinone) activity (ortholog); INVOLVED IN camera-type eye development (ortholog); gluconeogenesis (ortholog); glycerol-3-phosphate metabolic process (ortholog); PARTICIPATES IN D-glycericacidemia pathway; electron transport chain pathway; familial lipoprotein lipase deficiency pathway; ASSOCIATED WITH COVID-19 (ortholog); Experimental Diabetes Mellitus (ortholog); maturity-onset diabetes of the young type 1 (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 5 35117824 35241737 + 22301074;30032202 116901423 MODEL JAAIVD010000023;XM_032903313;XM_032903314 XP_032759204;XP_032759205 glycerol-3-phosphate dehydrogenase, mitochondrial protein-coding 626153495 LOC116887893 transcription factor SPT20 homolog X 51506800 51510847 + 30032202 116887893 MODEL JAAIVD010000014;XM_032889371 XP_032745262 protein-coding 626153501 LOC116886837 steroid 21-hydroxylase ENCODES a protein that exhibits 17-hydroxyprogesterone 21-hydroxylase activity (ortholog); heme binding (ortholog); progesterone 21-hydroxylase activity (ortholog); INVOLVED IN cortisol biosynthetic process (ortholog); steroid biosynthetic process (ortholog); steroid metabolic process (ortholog); PARTICIPATES IN 11-beta-hydroxylase deficiency pathway; 17-alpha-hydroxylase deficiency pathway; 21-alpha-hydroxylase deficiency pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); congenital adrenal hyperplasia (ortholog); Congenital Adrenal Hyperplasia due to 21 Hydroxylase Deficiency (ortholog) 18 7397920 7401255 - 22301074;30032202 116886837 MODEL JAAIVD010000013;XM_032888285 XP_032744176 protein-coding 626153515 Cel carboxyl ester lipase ENCODES a protein that exhibits glycosphingolipid binding (ortholog); phosphatidylcholine lysophospholipase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN ceramide catabolic process (ortholog); intestinal cholesterol absorption (ortholog); pancreatic juice secretion (ortholog); ASSOCIATED WITH Chronic Pancreatitis (ortholog); diabetes mellitus (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 5 8113183 8120587 + 30032202 116900066 MODEL JAAIVD010000023;XM_032901857 XP_032757748 bile salt-activated lipase protein-coding 626153530 Lpin3 lipin 3 ENCODES a protein that exhibits phosphatidate phosphatase activity (ortholog) 5 140183600 140196568 + 30032202 116902251 MODEL JAAIVD010000023;XM_032904669 XP_032760560 phosphatidate phosphatase LPIN3 protein-coding 626153553 Casq2 calsequestrin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion sequestering activity (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN cardiac muscle contraction (ortholog); cellular response to caffeine (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Cardiac Arrhythmias (ortholog); Cardiac Conduction Defect (ortholog); FOUND IN cytoplasm (ortholog); junctional membrane complex (ortholog); sarcoplasmic reticulum (ortholog) 3 55928161 55985234 - 22301074;30032202 116895382 MODEL JAAIVD010000012;XM_032896672;XM_032896673 XP_032752563;XP_032752564 calsequestrin-2 protein-coding 626153570 Il1f10 interleukin 1 family member 10 5 12905412 12908428 - 22301074;30032202 116900107 MODEL JAAIVD010000023;XM_032901883 XP_032757774 interleukin-1 family member 10 protein-coding 626153578 LOC116883992 proline-rich protein HaeIII subfamily 1-like 14 77551089 77551864 + 116883992 MODEL JAAIVD010000009;XM_032885229 XP_032741120 protein-coding 626153584 LOC116914830 sperm-associated antigen 11B-like 13 64574509 64576518 + 22301074;30032202 116914830 MODEL JAAIVD010000008;XM_032919284;XM_032919285;XM_032919286 XP_032775175;XP_032775176;XP_032775177 protein-coding 626153597 LOC116895756 40S ribosomal protein S25-like 3 40063648 40064025 - 116895756 MODEL JAAIVD010000012 pseudo 626153598 LOC116895919 TD and POZ domain-containing protein 2-like 3 120973682 120974784 + 30032202 116895919 MODEL JAAIVD010000012;XM_032896994 XP_032752885 protein-coding 626153601 LOC116907234 uncharacterized LOC116907234 1 159734631 159745139 + 116907234 MODEL JAAIVD010000025;XR_004388812;XR_004388813 ncrna 626153608 Reep2 receptor accessory protein 2 ENCODES a protein that exhibits taste receptor binding (ortholog); INVOLVED IN endoplasmic reticulum tubular network organization (ortholog); protein transport into membrane raft (ortholog); sensory perception of bitter taste (ortholog); ASSOCIATED WITH genetic disease (ortholog); hereditary spastic paraplegia 5A (ortholog); hereditary spastic paraplegia 72A (ortholog); FOUND IN cytoplasmic microtubule (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 15 9515295 9523572 - 30032202 116884642 MODEL JAAIVD010000010;XM_032885784;XM_032885785 XP_032741675;XP_032741676 receptor expression-enhancing protein 2 protein-coding 626153622 Lima1 LIM domain and actin binding 1 ENCODES a protein that exhibits actin filament binding (ortholog); actin monomer binding (ortholog); microtubule stabilizing activity (ortholog); INVOLVED IN actin filament bundle assembly (ortholog); cell migration (ortholog); cholesterol homeostasis (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); brush border (ortholog) 1 272576371 272642057 - 30032202 116885264 MODEL JAAIVD010000025;XM_032886501 XP_032742392 LIM domain and actin-binding protein 1 protein-coding 626153636 LOC116893996 olfactory receptor 51I2-like 2 101567241 101568185 + 22301074 116893996 MODEL JAAIVD010000001;XM_032895711 XP_032751602 protein-coding 626153639 Wdr97 WD repeat domain 97 1 248689267 248697879 + 22301074 116913131 MODEL JAAIVD010000025;XM_032917315 XP_032773206 WD repeat-containing protein 97 protein-coding 626153666 Borcs7 BLOC-1 related complex subunit 7 INVOLVED IN axon development (ortholog); lysosome localization (ortholog); motor behavior (ortholog); ASSOCIATED WITH hereditary spastic paraplegia (ortholog); neuroaxonal dystrophy (ortholog); schizophrenia (ortholog); FOUND IN BORC complex (ortholog); lysosome (ortholog) 2 46158665 46172209 + 30032202 116891255 MODEL JAAIVD010000001;XM_032892137 XP_032748028 BLOC-1-related complex subunit 7 protein-coding 626153675 Sp7 Sp7 transcription factor ENCODES a protein that exhibits DEAD/H-box RNA helicase binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); cellular response to zinc ion starvation (ortholog); cementum mineralization (ortholog); ASSOCIATED WITH aortic valve stenosis (ortholog); osteogenesis imperfecta (ortholog); osteogenesis imperfecta type 12 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 260713859 260722613 + 30032202 116890194 MODEL JAAIVD010000025;XM_032890928;XM_032890929 XP_032746819;XP_032746820 transcription factor Sp7 protein-coding 626153685 LOC116910736 U6atac minor spliceosomal RNA 9 81703168 81703269 + 116910736 MODEL JAAIVD010000002 pseudo 626153686 Slco1b3 solute carrier organic anion transporter family member 1B3 ENCODES a protein that exhibits bile acid transmembrane transporter activity (ortholog); oligopeptide transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); INVOLVED IN bile acid and bile salt transport (ortholog); bilirubin conjugation (ortholog); bilirubin transport (ortholog); PARTICIPATES IN docetaxel pharmacodynamics pathway; multispecific organic anion transporter mediated transport pathway; mycophenolic acid pharmacokinetics pathway; ASSOCIATED WITH Animal Hepatitis (ortholog); bilirubin metabolic disorder (ortholog); breast ductal carcinoma (ortholog); FOUND IN basal plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 6 7911797 7966579 - 22301074;30032202 116903127 MODEL JAAIVD010000024;XM_032905480;XM_032905481;XM_032905482 XP_032761371;XP_032761372;XP_032761373 protein-coding 626153710 Rab40c RAB40C, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); INVOLVED IN cell migration (ortholog); lipid droplet formation (ortholog); negative regulation of focal adhesion assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog); FOUND IN Cul5-RING ubiquitin ligase complex (ortholog); cytosol (ortholog); Golgi apparatus (ortholog) 9 3146016 3181100 - 22301074;30032202 116908477 MODEL JAAIVD010000002;XM_032911627;XM_032911628;XM_032911629 XP_032767518;XP_032767519;XP_032767520 ras-related protein Rab-40C protein-coding 626153727 Mctp2 multiple C2 and transmembrane domain containing 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); ASSOCIATED WITH genetic disease (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); nucleoplasm (ortholog) 2 128138966 128366427 + 30032202 116891973 MODEL JAAIVD010000001;XM_032893415 XP_032749306 multiple C2 and transmembrane domain-containing protein 2 protein-coding 626153754 LOC116914143 small nucleolar RNA SNORA17 12 15261472 15261594 + 116914143 MODEL JAAIVD010000007 pseudo 626153755 LOC116894525 ribosomal L1 domain-containing protein 1-like 2 175155014 175155908 + 116894525 MODEL JAAIVD010000001 pseudo 626153756 Znf428 zinc finger protein 428 FOUND IN mitochondrion (ortholog) 2 170197157 170206506 - 116892487 MODEL JAAIVD010000001;XM_032894216;XM_032894217;XM_032894218;XM_032894219;XM_032894220;XM_032894221 XP_032750107;XP_032750108;XP_032750109;XP_032750110;XP_032750111;XP_032750112 protein-coding 626153776 Bcan brevican INVOLVED IN cell-matrix adhesion (ortholog); gliogenesis (ortholog); hippocampus development (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); high grade glioma (ortholog); FOUND IN axon (ortholog); axon initial segment (ortholog); cell surface (ortholog) 3 65557849 65570665 + 22301074 116896705 MODEL JAAIVD010000012;XM_032898114;XM_032898116;XM_032898117;XM_032898118;XM_032898119;XM_032898120;XR_004387359;XR_004387360 XP_032754005;XP_032754007;XP_032754008;XP_032754009;XP_032754010;XP_032754011 brevican core protein protein-coding 626153817 LOC116895550 arginine/serine-rich coiled-coil protein 2-like 3 121443929 121444833 - 116895550 MODEL JAAIVD010000012 pseudo 626153818 LOC116904457 histone H3.3A-like 6 131320067 131327513 - 22301074;30032202 116904457 MODEL JAAIVD010000024;XM_032907273 XP_032763164 protein-coding 626153822 LOC116894883 U6 spliceosomal RNA 2 93859202 93859295 - 116894883 MODEL JAAIVD010000001 pseudo 626153823 Tenm4 teneurin transmembrane protein 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN cardiac cell fate specification (ortholog); cardiac muscle cell proliferation (ortholog); central nervous system myelin formation (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); cleft palate (ortholog); essential tremor 5 (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); neuron projection (ortholog) 2 94821368 95298837 + 22301074;30032202 116891688 MODEL JAAIVD010000001;XM_032892951;XM_032892952;XM_032892953;XM_032892954;XM_032892955 XP_032748842;XP_032748843;XP_032748844;XP_032748845;XP_032748846 teneurin-4 protein-coding 626153867 Abca6 ATP binding cassette subfamily A member 6 ASSOCIATED WITH allergic contact dermatitis (ortholog); Colorectal Neoplasms (ortholog); FOUND IN Golgi membrane (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 9 79051504 79127421 + 22301074;30032202 116908899 MODEL JAAIVD010000002;XM_032912352 XP_032768243 ATP-binding cassette sub-family A member 6 protein-coding 626153908 LOC116914308 histone deacetylase 1-like 13 36122702 36170114 + 116914308 MODEL JAAIVD010000008 pseudo 626153909 Amz2 archaelysin family metallopeptidase 2 ASSOCIATED WITH Monoclonal B-Cell Lymphocytosis (ortholog) 9 69700861 69711577 - 22301074 116909014 MODEL JAAIVD010000002;XM_032912488;XM_032912489 XP_032768379;XP_032768380 archaemetzincin-2 protein-coding 626153925 Ube2l6 ubiquitin conjugating enzyme E2 L6 ENCODES a protein that exhibits ISG15 transferase activity (ortholog); ubiquitin binding (ortholog); ubiquitin-like protein transferase activity (ortholog); INVOLVED IN innate immune response (ortholog); ISG15-protein conjugation (ortholog); modification-dependent protein catabolic process (ortholog); ASSOCIATED WITH Human Influenza (ortholog) 5 62179721 62190757 + 116901589 MODEL JAAIVD010000023;XM_032903605 XP_032759496 ubiquitin/ISG15-conjugating enzyme E2 L6 protein-coding 626153932 LOC116893913 uncharacterized LOC116893913 2 80498436 80504194 - 116893913 MODEL JAAIVD010000001;XR_004387012;XR_004387013 ncrna 626153939 Nudt19 nudix hydrolase 19 ENCODES a protein that exhibits coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN butyryl-CoA catabolic process (ortholog); coenzyme A catabolic process (ortholog); malonyl-CoA catabolic process (ortholog); FOUND IN mitochondrion (ortholog) 2 163101938 163114125 + 30032202 116892265 MODEL JAAIVD010000001;XM_032893851 XP_032749742 nucleoside diphosphate-linked moiety X motif 19 protein-coding 626153946 LOC116883611 probable G-protein coupled receptor 141 14 38504135 38507676 - 22301074;30032202 116883611 MODEL JAAIVD010000009;XM_032884801 XP_032740692 protein-coding 626153952 Cdkl4 cyclin dependent kinase like 4 7 12524135 12550269 + 22301074;30032202 116905847 MODEL JAAIVD010000026;XM_032908818 XP_032764709 cyclin-dependent kinase-like 4 protein-coding 626153965 LOC116909978 uncharacterized LOC116909978 9 1811577 1812076 + 116909978 MODEL JAAIVD010000002;XR_004389119 ncrna 626153969 LOC116890795 double C2-like domain-containing protein gamma 2 3630790 3635293 - 22301074 116890795 MODEL JAAIVD010000001;XM_032891270;XM_032891272 XP_032747161;XP_032747163 protein-coding 626153986 Kctd11 potassium channel tetramerization domain containing 11 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of neuroblast proliferation (ortholog); negative regulation of smoothened signaling pathway (ortholog); nervous system development (ortholog); FOUND IN cytoplasm (ortholog) 9 49488496 49489884 - 22301074;30032202 116909740 MODEL JAAIVD010000002;XM_032913418 XP_032769309 BTB/POZ domain-containing protein KCTD11 protein-coding 626153991 Myo1h myosin IH ASSOCIATED WITH Congenital Central Hypoventilation Syndrome 2 and Autonomic Dysfunction (ortholog) 16 39599702 39648182 - 22301074;30032202 116885412 MODEL JAAIVD010000004;XM_032886699 XP_032742590 unconventional myosin-Ih protein-coding 626154025 Nudc nuclear distribution C, dynein complex regulator INVOLVED IN mitotic metaphase chromosome alignment (ortholog); mitotic spindle organization (ortholog); nuclear migration (ortholog); ASSOCIATED WITH Lynch syndrome (ortholog); obesity (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); midbody (ortholog) 1 24686951 24699748 + 30032202 116895145 MODEL JAAIVD010000025;XM_032896521 XP_032752412 nuclear migration protein nudC protein-coding 626154037 Trim55 tripartite motif containing 55 ENCODES a protein that exhibits identical protein binding (ortholog); protein-macromolecule adaptor activity (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); defense response to virus (ortholog); diapedesis (ortholog) 3 134365660 134407987 - 22301074 116895569 MODEL JAAIVD010000012;XM_032896803;XM_032896804 XP_032752694;XP_032752695 tripartite motif-containing protein 55 protein-coding 626154053 LOC116885482 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-like 1 94135413 94136573 + 116885482 MODEL JAAIVD010000025 pseudo 626154054 LOC116900072 uncharacterized LOC116900072 5 9618025 9619776 - 116900072 MODEL JAAIVD010000023;XR_004387915 ncrna 626154059 Lhfpl4 LHFPL tetraspan subfamily member 4 ENCODES a protein that exhibits GABA receptor binding (ortholog); INVOLVED IN gamma-aminobutyric acid receptor clustering (ortholog); neurotransmitter receptor localization to postsynaptic specialization membrane (ortholog); regulation of inhibitory synapse assembly (ortholog); FOUND IN GABA-ergic synapse (ortholog); inhibitory synapse (ortholog); postsynaptic membrane (ortholog) 6 33330339 33355313 + 30032202 116903425 MODEL JAAIVD010000024;XM_032905965 XP_032761856 LHFPL tetraspan subfamily member 4 protein protein-coding 626154067 LOC116897541 small nucleolar RNA SNORA17 3 107751272 107751403 - 116897541 MODEL JAAIVD010000012;XR_004387555 snorna 626154070 LOC116890041 25-hydroxyvitamin D-1 alpha hydroxylase, mitochondrial ENCODES a protein that exhibits calcidiol 1-monooxygenase activity (ortholog); secalciferol 1-monooxygenase activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcitriol biosynthetic process from calciol (ortholog); calcium ion homeostasis (ortholog); ASSOCIATED WITH Acidoses (ortholog); acute kidney failure (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 1 205477911 205482915 + 22301074;30032202 116890041 MODEL JAAIVD010000025;XM_032890812 XP_032746703 protein-coding 626154083 Nr5a2 nuclear receptor subfamily 5 group A member 2 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN acinar cell differentiation (ortholog); bile acid metabolic process (ortholog); calcineurin-mediated signaling (ortholog); ASSOCIATED WITH anovulation (ortholog); Chemical and Drug Induced Liver Injury (ortholog); colon cancer (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); RNA polymerase II transcription regulator complex (ortholog) 3 113180129 113183056 - 22301074;30032202 116896912 MODEL JAAIVD010000012;XM_032898471 XP_032754362 protein-coding 626154088 LOC116900175 glyceraldehyde-3-phosphate dehydrogenase-like 5 33361110 33362109 - 116900175 MODEL JAAIVD010000023 pseudo 626154089 LOC116898762 uncharacterized LOC116898762 4 16796134 16798163 - 116898762 MODEL JAAIVD010000003;XR_004387661 ncrna 626154093 Ctss cathepsin S ENCODES a protein that exhibits collagen binding (ortholog); cysteine-type endopeptidase activity (ortholog); cysteine-type peptidase activity (ortholog); INVOLVED IN adaptive immune response (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); antigen processing and presentation of peptide antigen (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); atherosclerosis (ortholog); carotid artery disease (ortholog); FOUND IN cell surface (ortholog); extracellular space (ortholog); late endosome (ortholog) 3 61716856 61743522 - 30032202 116896548 MODEL JAAIVD010000012;XM_032897736;XM_032897738 XP_032753627;XP_032753629 protein-coding 626154109 LOC116895314 glyceraldehyde-3-phosphate dehydrogenase-like 3 25327228 25328252 - 116895314 MODEL JAAIVD010000012 pseudo 626154110 LOC116907142 60S ribosomal protein L13-like 8 53208682 53210006 + 22301074;30032202 116907142 MODEL JAAIVD010000027;XM_032910111 XP_032766002 protein-coding 626154115 Dynlrb1 dynein light chain roadblock-type 1 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN response to light stimulus (ortholog); visual behavior (ortholog); PARTICIPATES IN mitochondria transport pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); cytoplasmic dynein complex (ortholog) 5 134593003 134614100 + 22301074;30032202 116902172 MODEL JAAIVD010000023;XM_032904514 XP_032760405 protein-coding 626154123 Thtpa thiamine triphosphatase ENCODES a protein that exhibits magnesium ion binding (ortholog); thiamine triphosphate phosphatase activity (ortholog); INVOLVED IN dephosphorylation (ortholog); thiamine diphosphate biosynthetic process (ortholog); thiamine diphosphate metabolic process (ortholog); PARTICIPATES IN thiamine metabolic pathway; FOUND IN cytosol (ortholog) 12 69899850 69903442 - 22301074;30032202 116913500 MODEL JAAIVD010000007;XM_032917702 XP_032773593 thiamine-triphosphatase protein-coding 626154129 LOC116893689 olfactory receptor 5B12-like 2 12925892 12926836 + 22301074;30032202 116893689 MODEL JAAIVD010000001;XM_032895406 XP_032751297 protein-coding 626154132 LOC116891122 protein FRA10AC1 homolog INVOLVED IN mRNA splicing, via spliceosome (ortholog); ASSOCIATED WITH genetic disease (ortholog); Neurodevelopmental Disorder with Growth Retardation, Dysmorphic Facies, and Corpus Callosum Abnormalities (ortholog); FOUND IN nucleus (ortholog) 2 35535472 35567106 + 30032202 116891122 MODEL JAAIVD010000001;XM_032891838;XM_032891839;XM_032891840;XM_032891841;XM_032891842;XM_032891843;XM_032891844 XP_032747729;XP_032747730;XP_032747731;XP_032747732;XP_032747733;XP_032747734;XP_032747735 protein-coding 626154169 LOC116912681 guanylate-binding protein 6-like 11 14988953 14992811 + 116912681 MODEL JAAIVD010000006 pseudo 626154170 LOC116906410 small nucleolar RNA SNORA16B/SNORA16A family 7 113264402 113264528 - 116906410 MODEL JAAIVD010000026;XR_004388672 snorna 626154173 LOC116885621 non-histone chromosomal protein HMG-17-like 1 212722562 212722964 - 116885621 MODEL JAAIVD010000025 pseudo 626154174 LOC116911601 proteasome subunit alpha type-6-like 10 23379461 23384695 + 116911601 MODEL JAAIVD010000005 pseudo 626154175 LOC116883434 enoyl-CoA delta isomerase 2, mitochondrial 14 53522958 53538941 - 22301074 116883434 MODEL JAAIVD010000009;XM_032884573 XP_032740464 protein-coding 626154189 Ric1 RIC1 partner of RAB6A GEF complex ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN cranial skeletal system development (ortholog); negative regulation of protein catabolic process (ortholog); positive regulation of GTPase activity (ortholog); ASSOCIATED WITH CATIFA Syndrome (ortholog); epilepsy (ortholog); FOUND IN cytosol (ortholog); membrane (ortholog); protein-containing complex (ortholog) 2 29617445 29708193 + 22301074;30032202 116891074 MODEL JAAIVD010000001;XM_032891779;XM_032891780 XP_032747670;XP_032747671 RAB6A-GEF complex partner protein 1;RIC1 homolog, RAB6A GEF complex partner 1 protein-coding 626154223 Map3k13 mitogen-activated protein kinase kinase kinase 13 ENCODES a protein that exhibits enzyme binding (ortholog); identical protein binding (ortholog); IkappaB kinase complex binding (ortholog); INVOLVED IN JNK cascade (ortholog); positive regulation of axon extension (ortholog); positive regulation of branching morphogenesis of a nerve (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH gastroesophageal adenocarcinoma (ortholog); FOUND IN membrane (ortholog) 4 6502581 6612915 + 22301074;30032202 116898712 MODEL JAAIVD010000003;XM_032900002 XP_032755893 protein-coding 626154241 Bsn bassoon presynaptic cytomatrix protein ENCODES a protein that exhibits dynein light chain binding (ortholog); enzyme inhibitor activity (ortholog); structural constituent of presynaptic active zone (ortholog); INVOLVED IN axo-dendritic transport (ortholog); modulation of chemical synaptic transmission (ortholog); presynaptic active zone assembly (ortholog); ASSOCIATED WITH epilepsy (ortholog); heart disease (ortholog); FOUND IN axon (ortholog); axon cytoplasm (ortholog); cell cortex (ortholog) 8 99427841 99517738 - 22301074;30032202 116907568 MODEL JAAIVD010000027;XM_032910592;XM_032910593 XP_032766483;XP_032766484 protein bassoon protein-coding 626154259 LOC116894493 calcineurin B homologous protein 3-like 2 170383026 170384067 + 22301074 116894493 MODEL JAAIVD010000001;XM_032896202 XP_032752093 protein-coding 626154264 LOC116912941 U7 small nuclear RNA 11 27172816 27172876 - 116912941 MODEL JAAIVD010000006;XR_004389509 snrna 626154267 Cygb cytoglobin ENCODES a protein that exhibits carbon monoxide binding (ortholog); catalase activity (ortholog); fatty acid peroxidase activity (ortholog); INVOLVED IN fatty acid oxidation (ortholog); negative regulation of collagen biosynthetic process (ortholog); negative regulation of fibroblast migration (ortholog); ASSOCIATED WITH Chronic Pancreatitis (ortholog); Experimental Liver Cirrhosis (ortholog); extrahepatic cholestasis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); neuron projection (ortholog) 9 67417071 67426660 + 22301074;30032202 116909467 MODEL JAAIVD010000002;XM_032913055 XP_032768946 protein-coding 626154275 Eif3m eukaryotic translation initiation factor 3 subunit M ENCODES a protein that exhibits translation initiation factor activity (ortholog); translation initiation factor binding (ortholog); INVOLVED IN translation (ortholog); PARTICIPATES IN translation initiation pathway; FOUND IN eukaryotic translation initiation factor 3 complex (ortholog); eukaryotic translation initiation factor 3 complex, eIF3m (ortholog) 5 82914510 82932409 - 22301074;30032202 116901710 MODEL JAAIVD010000023;XM_032903843 XP_032759734 protein-coding 626154290 LOC116915142 small nucleolar RNA SNORA17 13 15059588 15059707 + 116915142 MODEL JAAIVD010000008 pseudo 626154291 Paqr9 progestin and adipoQ receptor family member 9 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog) 8 87013657 87015866 + 22301074;30032202 116907546 MODEL JAAIVD010000027;XM_032910569 XP_032766460 membrane progestin receptor epsilon protein-coding 626154296 Rps15a ribosomal protein S15a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN positive regulation of cell cycle (ortholog); positive regulation of cell population proliferation (ortholog); response to virus (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Diamond-Blackfan anemia 20 (ortholog); FOUND IN cytoplasm (ortholog); cytosolic ribosome (ortholog); cytosolic small ribosomal subunit (ortholog) 2 83523705 83530512 + 22301074;30032202 116891616 MODEL JAAIVD010000001;XM_032892823 XP_032748714 40S ribosomal protein S15a protein-coding 626154305 Cerkl CERK like autophagy regulator ENCODES a protein that exhibits sphingolipid binding (ortholog); INVOLVED IN negative regulation of apoptotic process (ortholog); sphingolipid biosynthetic process (ortholog); ASSOCIATED WITH cone dystrophy (ortholog); cone-rod dystrophy (ortholog); fundus dystrophy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); endoplasmic reticulum (ortholog) 5 56564110 56657217 - 22301074 116901561 MODEL JAAIVD010000023;XM_032903555 XP_032759446 ceramide kinase like;ceramide kinase-like protein protein-coding 626154322 LOC116910774 U6 spliceosomal RNA 9 68311553 68311655 - 116910774 MODEL JAAIVD010000002;XR_004389282 snrna 626154325 Chtop chromatin target of PRMT1 ENCODES a protein that exhibits methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); in utero embryonic development (ortholog); mRNA export from nucleus (ortholog); FOUND IN nuclear speck (ortholog); transcription export complex (ortholog) 3 63111767 63123284 + 116896600 MODEL JAAIVD010000012;XM_032897847;XM_032897848;XM_032897849;XM_032897850;XM_032897852 XP_032753738;XP_032753739;XP_032753740;XP_032753741;XP_032753743 chromatin target of PRMT1 protein protein-coding 626154344 LOC116913279 biorientation of chromosomes in cell division protein 1-like 12 86999047 87039385 - 116913279 MODEL JAAIVD010000007 pseudo 626154345 LOC116905830 60S ribosomal protein L7a-like 7 105048866 105049690 + 116905830 MODEL JAAIVD010000026 pseudo 626154346 LOC116901440 CD302 antigen 5 37928478 38056250 - 30032202 116901440 MODEL JAAIVD010000023;XM_032903367;XM_032903368 XP_032759258;XP_032759259 lymphocyte antigen 75 protein-coding 626154392 Mars2 methionyl-tRNA synthetase 2, mitochondrial ENCODES a protein that exhibits methionine-tRNA ligase activity (ortholog); INVOLVED IN methionyl-tRNA aminoacylation (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 25 (ortholog); spastic ataxia 3 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 129665656 129668515 + 22301074;30032202 116899394 MODEL JAAIVD010000003;XM_032901118 XP_032757009 methionine--tRNA ligase, mitochondrial protein-coding 626154397 LOC116897507 U1 spliceosomal RNA 3 215238739 215238900 + 116897507 MODEL JAAIVD010000012;XR_004387527 snrna 626154400 LOC116907388 prostate and testis expressed protein 2-like 8 53880703 53881796 - 116907388 MODEL JAAIVD010000027;XM_032910341;XM_032910342 XP_032766232;XP_032766233 protein-coding 626154407 LOC116894041 olfactory receptor 52B4-like 2 102472353 102473297 + 22301074 116894041 MODEL JAAIVD010000001;XM_032895761 XP_032751652 protein-coding 626154410 LOC116900007 microtubule-associated proteins 1A/1B light chain 3B-like 5 8349454 8350754 + 116900007 MODEL JAAIVD010000023 pseudo 626154411 LOC116900346 olfactory receptor 10AG1-like 5 68983268 68984211 + 116900346 MODEL JAAIVD010000023 pseudo 626154412 C18H6orf136 chromosome 18 C6orf136 homolog 18 9102236 9106358 - 116887474 MODEL JAAIVD010000013;XM_032889090;XM_032889091 XP_032744981;XP_032744982 uncharacterized protein C6orf136 homolog protein-coding 626154424 Hhla1 HHLA1 neighbor of OC90 1 240084733 240116611 - 116889864 MODEL JAAIVD010000025;XM_032890693 XP_032746584 HERV-H LTR-associating 1;HERV-H LTR-associating protein 1 protein-coding 626154442 LOC116885193 uncharacterized LOC116885193 16 42449602 42450582 + 116885193 MODEL JAAIVD010000004;XR_004385993 ncrna 626154446 Scp2d1 SCP2 sterol binding domain containing 1 5 124459173 124461397 + 30032202 116900661 MODEL JAAIVD010000023;XM_032902366 XP_032758257 SCP2 sterol-binding domain-containing protein 1 protein-coding 626154452 LOC116902995 serine/arginine-rich splicing factor 3-like 6 100229594 100230032 + 116902995 MODEL JAAIVD010000024 pseudo 626154453 Nudt17 nudix hydrolase 17 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); INVOLVED IN RNA decapping (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog) 3 60596961 60599540 + 30032202 116896502 MODEL JAAIVD010000012;XM_032897677 XP_032753568 nucleoside diphosphate-linked moiety X motif 17 protein-coding 626154465 Ubxn6 UBX domain protein 6 ENCODES a protein that exhibits ATPase binding (ortholog); INVOLVED IN endosome to lysosome transport via multivesicular body sorting pathway (ortholog); ERAD pathway (ortholog); macroautophagy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); early endosome membrane (ortholog) 4 87462235 87467694 - 22301074;30032202 116899167 MODEL JAAIVD010000003;XM_032900733 XP_032756624 UBX domain-containing protein 6 protein-coding 626154480 Als2 alsin Rho guanine nucleotide exchange factor ALS2 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); INVOLVED IN axonogenesis (ortholog); behavioral fear response (ortholog); endosomal transport (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 2 (ortholog); Amyotrophic Lateral Sclerosis, Autosomal Recessive (ortholog); FOUND IN axon (ortholog); centrosome (ortholog); cytoplasm (ortholog) 4 133267323 133339715 + 22301074 116899413 MODEL JAAIVD010000003;XM_032901149;XM_032901150 XP_032757040;XP_032757041 alsin protein-coding 626154523 LOC116885922 40S ribosomal protein S20-like 16 25406421 25406800 + 116885922 MODEL JAAIVD010000004 pseudo 626154524 Rab4b RAB4B, member RAS oncogene family ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN D-glucose import (ortholog); early endosome to Golgi transport (ortholog); endosomal vesicle fusion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN early endosome membrane (ortholog); insulin-responsive compartment (ortholog); perinuclear region of cytoplasm (ortholog) 2 168763783 168777726 + 22301074;30032202 116892444 MODEL JAAIVD010000001;XM_032894142;XM_032894143;XM_032894144;XM_032894145 XP_032750033;XP_032750034;XP_032750035;XP_032750036 ras-related protein Rab-4B protein-coding 626154545 Tmem229b transmembrane protein 229B INVOLVED IN macrophage activation (ortholog); response to bacterium (ortholog) 7 93075216 93124024 - 116905201 MODEL JAAIVD010000026;XM_032907998;XM_032907999;XM_032908000;XM_032908001;XM_032908002;XM_032908003;XM_032908004;XM_032908005;XM_032908007;XM_032908008;XM_032908009;XR_004388497;XR_004388498 XP_032763889;XP_032763890;XP_032763891;XP_032763892;XP_032763893;XP_032763894;XP_032763895;XP_032763896;XP_032763898;XP_032763899;XP_032763900 protein-coding 626154586 Bcl6 BCL6 transcription repressor ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); B cell differentiation (ortholog); cell morphogenesis (ortholog); PARTICIPATES IN interleukin-4 signaling pathway; ASSOCIATED WITH B-cell lymphoma (ortholog); diffuse large B-cell lymphoma (ortholog); Gastrointestinal Hemorrhage (ortholog); FOUND IN Golgi apparatus (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 4 8737904 8761176 - 22301074;30032202 116898731 MODEL JAAIVD010000003;XM_032900038 XP_032755929 B-cell lymphoma 6 protein protein-coding 626154600 Megf9 multiple EGF like domains 9 FOUND IN basement membrane (ortholog) 1 82751170 82852672 + 30032202 116901169 MODEL JAAIVD010000025;XM_032902829 XP_032758720 multiple epidermal growth factor-like domains protein 9 protein-coding 626154610 Trim67 tripartite motif containing 67 INVOLVED IN negative regulation of Ras protein signal transduction (ortholog); positive regulation of neuron projection development (ortholog); positive regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog) 17 44316747 44352395 + 22301074 116886385 MODEL JAAIVD010000011;XM_032887852 XP_032743743 tripartite motif-containing protein 67 protein-coding 626154624 LOC116893346 carcinoembryonic antigen-related cell adhesion molecule 3-like 2 157045007 157050313 - 30032202 116893346 MODEL JAAIVD010000001;XM_032895154 XP_032751045 protein-coding 626154630 Nt5dc2 5'-nucleotidase domain containing 2 INVOLVED IN negative regulation of catecholamine metabolic process (ortholog); negative regulation of dopamine biosynthetic process (ortholog); negative regulation of oxidoreductase activity (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog) 13 6829124 6837071 + 30032202 116914757 MODEL JAAIVD010000008;XM_032919207 XP_032775098 5'-nucleotidase domain-containing protein 2 protein-coding 626154648 Hemk2 HemK methyltransferase 2, ETF1 glutamine and histone H4 lysine ENCODES a protein that exhibits arsenite methyltransferase activity (ortholog); histone H4K12 methyltransferase activity (ortholog); protein methyltransferase activity (ortholog); INVOLVED IN arsonoacetate metabolic process (ortholog); methylation (ortholog); negative regulation of gene expression, epigenetic (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) 4 56483096 56494992 - 22301074;30032202 116899032 MODEL JAAIVD010000003;XM_032900486 XP_032756377 N6amt1 N-6 adenine-specific DNA methyltransferase 1;methyltransferase N6AMT1 protein-coding 626154658 Ethe1 ETHE1 persulfide dioxygenase ENCODES a protein that exhibits identical protein binding (ortholog); iron ion binding (ortholog); sulfur dioxygenase activity (ortholog); INVOLVED IN glutathione metabolic process (ortholog); hydrogen sulfide metabolic process (ortholog); ASSOCIATED WITH ethylmalonic encephalopathy (ortholog); genetic disease (ortholog); Nervous System Malformations (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 2 170106917 170121798 - 22301074;30032202 116892482 MODEL JAAIVD010000001;XM_032894210 XP_032750101 persulfide dioxygenase ETHE1, mitochondrial protein-coding 626154669 Cxcl12 C-X-C motif chemokine ligand 12 ENCODES a protein that exhibits chemokine activity (ortholog); chemokine receptor binding (ortholog); CXCR chemokine receptor binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adult locomotory behavior (ortholog); ameboidal-type cell migration (ortholog); PARTICIPATES IN hypoxia inducible factor pathway; syndecan signaling pathway; ASSOCIATED WITH anti-basement membrane glomerulonephritis (ortholog); brain ischemia (ortholog); breast carcinoma (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 6 29481504 29494334 - 22301074;30032202 116903358 MODEL JAAIVD010000024;XM_032905832 XP_032761723 stromal cell-derived factor 1 protein-coding 626154677 LOC116912677 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 3-like 11 13982545 13982817 + 116912677 MODEL JAAIVD010000006 pseudo 626154678 Sec22a SEC22 homolog A, vesicle trafficking protein INVOLVED IN endoplasmic reticulum to Golgi vesicle-mediated transport (ortholog) 4 20094890 20144090 - 30032202 116898807 MODEL JAAIVD010000003;XM_032900157;XM_032900158;XM_032900159 XP_032756048;XP_032756049;XP_032756050 vesicle-trafficking protein SEC22a protein-coding 626154695 Ndc1 NDC1 transmembrane nucleoporin ENCODES a protein that exhibits structural constituent of nuclear pore (ortholog); INVOLVED IN homologous chromosome pairing at meiosis (ortholog); nuclear pore complex assembly (ortholog); nuclear pore localization (ortholog); ASSOCIATED WITH Developmental Disabilities (ortholog); Weight Gain (ortholog); FOUND IN actin cytoskeleton (ortholog); cytoplasm (ortholog); nuclear envelope (ortholog) 1 47390313 47436195 - 30032202 116899256 MODEL JAAIVD010000025;XM_032900872 XP_032756763 nucleoporin NDC1 protein-coding 626154717 Ccdc141 coiled-coil domain containing 141 INVOLVED IN brain development (ortholog); centrosome localization (ortholog); cerebral cortex radially oriented cell migration (ortholog); ASSOCIATED WITH disorder of sexual development (ortholog); hypogonadotropic hypogonadism (ortholog); hypogonadotropic hypogonadism 7 with or without anosmia (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog) 5 54351468 54508437 - 116901551 MODEL JAAIVD010000023;XM_032903542 XP_032759433 coiled-coil domain-containing protein 141 protein-coding 626154745 LOC116914323 bromodomain adjacent to zinc finger domain protein 2A-like 13 44558204 44569107 + 116914323 MODEL JAAIVD010000008 pseudo 626154746 Stx7 syntaxin 7 ENCODES a protein that exhibits chloride channel inhibitor activity (ortholog); protein-containing complex binding (ortholog); SNAP receptor activity (ortholog); INVOLVED IN endosome to lysosome transport (ortholog); positive regulation of receptor localization to synapse (ortholog); positive regulation of T cell mediated cytotoxicity (ortholog); FOUND IN azurophil granule (ortholog); early endosome (ortholog); endocytic vesicle (ortholog) 2 210238514 210278071 + 22301074;30032202 116892944 MODEL JAAIVD010000001;XM_032894893;XM_032894894 XP_032750784;XP_032750785 syntaxin-7 protein-coding 626154765 LOC116887096 keratin-associated protein 10-3-like 18 1106045 1106920 - 22301074;30032202 116887096 MODEL JAAIVD010000013;XM_032888607;XM_032888609;XM_032888610;XM_032888611;XM_032888612;XM_032888613;XM_032888614;XM_032888615 XP_032744498;XP_032744500;XP_032744501;XP_032744502;XP_032744503;XP_032744504;XP_032744505;XP_032744506 keratin-associated protein 10-1-like;keratin-associated protein 10-11-like;keratin-associated protein 10-8-like;keratin-associated protein 10-9-like protein-coding 626154788 LOC116907892 olfactory receptor 8D1-like 8 32646710 32647639 + 22301074;30032202 116907892 MODEL JAAIVD010000027;XM_032911090 XP_032766981 protein-coding 626154792 Wnt16 Wnt family member 16 INVOLVED IN bone remodeling (ortholog); cardiac epithelial to mesenchymal transition (ortholog); keratinocyte differentiation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling pathway; Wnt signaling, canonical pathway; FOUND IN cytoplasm (ortholog); extracellular space (ortholog) 6 116871037 116885865 - 22301074;30032202 116904045 MODEL JAAIVD010000024;XM_032906902;XM_032906903 XP_032762793;XP_032762794 protein Wnt-16 protein-coding 626154806 Lrp8 LDL receptor related protein 8 ENCODES a protein that exhibits amyloid-beta binding (ortholog); apolipoprotein binding (ortholog); calcium-dependent protein binding (ortholog); INVOLVED IN ammon gyrus development (ortholog); cellular response to cholesterol (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN altered Reelin signaling pathway; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); dementia (ortholog); Nerve Degeneration (ortholog); FOUND IN axon (ortholog); caveola (ortholog); cell surface (ortholog) 1 46959141 46982414 - 22301074 116899233 MODEL JAAIVD010000025;XM_032900835 XP_032756726 low-density lipoprotein receptor-related protein 8 protein-coding 626154824 LOC116894918 U1 spliceosomal RNA 2 111800003 111800188 + 116894918 MODEL JAAIVD010000001 pseudo 626154825 Jak2 Janus kinase 2 ENCODES a protein that exhibits acetylcholine receptor binding (ortholog); growth hormone receptor binding (ortholog); heme binding (ortholog); INVOLVED IN activation of Janus kinase activity (ortholog); axon regeneration (ortholog); cell adhesion (ortholog); PARTICIPATES IN aldosterone signaling pathway; altered Jak-Stat signaling pathway; angiotensin II signaling pathway; ASSOCIATED WITH acute kidney failure (ortholog); acute myeloid leukemia (ortholog); alcoholic liver cirrhosis (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 2 29327717 29387231 + 22301074;30032202 116891072 MODEL JAAIVD010000001;XM_032891777 XP_032747668 tyrosine-protein kinase JAK2 protein-coding 626154854 LOC116889601 uncharacterized LOC116889601 Y 2002949 2009928 + 116889601 MODEL JAAIVD010000015;XR_004386502 ncrna 626154859 LOC116885609 transmembrane protein 132D 16 26156833 26170524 + 116885609 MODEL JAAIVD010000004;XM_032886910 XP_032742801 protein-coding 626154867 LOC116885996 small nucleolar RNA SNORA67 16 31458319 31458460 - 116885996 MODEL JAAIVD010000004;XR_004386068 snorna 626154870 LOC116908937 keratin-associated protein 9-1-like 9 54663886 54664395 + 22301074 116908937 MODEL JAAIVD010000002;XM_032912395 XP_032768286 protein-coding 626154873 Fem1b fem-1 homolog B ENCODES a protein that exhibits death receptor binding (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN branching involved in prostate gland morphogenesis (ortholog); epithelial cell maturation (ortholog); epithelial cell maturation involved in prostate gland development (ortholog); ASSOCIATED WITH type 2 diabetes mellitus (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 57094302 57109810 - 22301074 116906654 MODEL JAAIVD010000027;XM_032909439 XP_032765330 protein fem-1 homolog B protein-coding 626154879 Igf1 insulin like growth factor 1 ENCODES a protein that exhibits growth factor activity (ortholog); hormone activity (ortholog); insulin receptor binding (ortholog); INVOLVED IN activation of protein kinase B activity (ortholog); blood vessel remodeling (ortholog); bone development (ortholog); PARTICIPATES IN altered insulin-like growth factor signaling pathway; cardiovascular system disease pathway; ceramide signaling pathway; ASSOCIATED WITH acne (ortholog); acoustic neuroma (ortholog); acromegaly (ortholog); FOUND IN alphav-beta3 integrin-IGF-1-IGF1R complex (ortholog); exocytic vesicle (ortholog); extracellular space (ortholog) 1 166967436 167046403 + 22301074 116907703 MODEL JAAIVD010000025;XM_032910829;XM_032910837 XP_032766720;XP_032766728 insulin-like growth factor I protein-coding 626154892 LOC116897587 small nucleolar RNA SNORA17 3 12600115 12600244 + 116897587 MODEL JAAIVD010000012;XR_004387591 snorna 626154895 Camsap3 calmodulin regulated spectrin associated protein family member 3 ENCODES a protein that exhibits actin filament binding (ortholog); microtubule minus-end binding (ortholog); INVOLVED IN cilium movement (ortholog); embryo development ending in birth or egg hatching (ortholog); epithelial cell-cell adhesion (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN axoneme (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 16 1503497 1528024 + 22301074;30032202 116885332 MODEL JAAIVD010000004;XM_032886597;XM_032886598;XM_032886599;XM_032886600;XM_032886601;XM_032886602;XM_032886603;XM_032886604 XP_032742488;XP_032742489;XP_032742490;XP_032742491;XP_032742492;XP_032742493;XP_032742494;XP_032742495 calmodulin-regulated spectrin-associated protein 3 protein-coding 626154932 LOC116909933 60S ribosomal protein L7 9 49921620 49922491 - 22301074;30032202 116909933 MODEL JAAIVD010000002;XM_032913702 XP_032769593 protein-coding 626154937 Imp4 IMP U3 small nucleolar ribonucleoprotein 4 INVOLVED IN ribosomal small subunit biogenesis (ortholog); PARTICIPATES IN ribosome biogenesis pathway; FOUND IN fibrillar center (ortholog); Mpp10 complex (ortholog); nucleolus (ortholog) 4 110669008 110674935 + 22301074;30032202 116899274 MODEL JAAIVD010000003;XM_032900903 XP_032756794 U3 small nucleolar ribonucleoprotein protein IMP4 protein-coding 626154950 LOC116895095 small nucleolar RNA U13 2 17922256 17922352 + 116895095 MODEL JAAIVD010000001 pseudo 626154951 LOC116900281 olfactory receptor 8K1-like 5 63495619 63496572 - 22301074;30032202 116900281 MODEL JAAIVD010000023;XM_032902035 XP_032757926 protein-coding 626154955 LOC116910986 proteasome activator complex subunit 2-like 10 10550807 10551577 + 22301074;30032202 116910986 MODEL JAAIVD010000005;XM_032914698 XP_032770589 protein-coding 626154960 LOC116886774 U1 spliceosomal RNA 17 33188810 33188969 + 116886774 MODEL JAAIVD010000011;XR_004386171 snrna 626154963 Trnt1 tRNA nucleotidyl transferase 1 ENCODES a protein that exhibits CCA tRNA nucleotidyltransferase activity (ortholog); CCACCA tRNA nucleotidyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN mitochondrial tRNA 3'-end processing (ortholog); rescue of stalled ribosome (ortholog); tRNA 3'-terminal CCA addition (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); genetic disease (ortholog); optic atrophy (ortholog); FOUND IN cytosol (ortholog); mitochondrion (ortholog); nucleus (ortholog) 6 39925848 39939877 - 22301074 116903446 MODEL JAAIVD010000024;XM_032906001 XP_032761892 CCA tRNA nucleotidyltransferase 1, mitochondrial protein-coding 626154976 Tstd2 thiosulfate sulfurtransferase like domain containing 2 1 377289 399911 + 116890679 MODEL JAAIVD010000025;XM_032891090;XM_032891099;XM_032891108 XP_032746981;XP_032746990;XP_032746999 thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 2 protein-coding 626154996 Mib1 MIB E3 ubiquitin protein ligase 1 INVOLVED IN blood vessel development (ortholog); central nervous system neuron differentiation (ortholog); heart development (ortholog); PARTICIPATES IN Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); dilated cardiomyopathy (ortholog); familial hypertrophic cardiomyopathy (ortholog); FOUND IN centrosome (ortholog); cytoplasmic vesicle (ortholog); glutamatergic synapse (ortholog) 15 33280666 33392954 - 22301074;30032202 116884864 MODEL JAAIVD010000010;XM_032886102;XM_032886103 XP_032741993;XP_032741994 E3 ubiquitin-protein ligase MIB1;mindbomb E3 ubiquitin protein ligase 1 protein-coding 626155027 LOC116895839 60S ribosomal protein L21-like 3 81045465 81045993 - 116895839 MODEL JAAIVD010000012 pseudo 626155028 LOC116903000 transmembrane protein 183-like 6 141898924 141900030 - 116903000 MODEL JAAIVD010000024 pseudo 626155029 LOC116887189 heterogeneous nuclear ribonucleoprotein A1-like 1 38096554 38097695 - 116887189 MODEL JAAIVD010000025 pseudo 626155030 LOC116913723 40S ribosomal protein S13-like 1 178991062 178991496 + 116913723 MODEL JAAIVD010000025 pseudo 626155031 Nckap5 NCK associated protein 5 ASSOCIATED WITH amenorrhea (ortholog); proteinuria (ortholog) 10 9771727 10327594 - 30032202 116910987 MODEL JAAIVD010000005;XM_032914699 XP_032770590 nck-associated protein 5 protein-coding 626155049 Tenm3 teneurin transmembrane protein 3 ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN camera-type eye morphogenesis (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); positive regulation of neuron projection development (ortholog); ASSOCIATED WITH cocaine dependence (ortholog); Cocaine-Related Disorders (ortholog); genetic disease (ortholog); FOUND IN glutamatergic synapse (ortholog); membrane (ortholog); plasma membrane (ortholog) 13 39188831 39792459 + 22301074;30032202 116914958 MODEL JAAIVD010000008;XM_032919375 XP_032775266 teneurin-3 protein-coding 626155084 LOC116888141 high mobility group protein B4-like X 108236193 108236700 + 116888141 MODEL JAAIVD010000014 pseudo 626155085 Gda guanine deaminase ENCODES a protein that exhibits guanine deaminase activity (ortholog); INVOLVED IN allantoin metabolic process (ortholog); amide catabolic process (ortholog); deoxyguanosine catabolic process (ortholog); PARTICIPATES IN adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; adenylosuccinate lyase deficiency pathway; ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); postsynapse (ortholog); postsynaptic cytosol (ortholog) 2 21472097 21546296 - 22301074;30032202 116891028 MODEL JAAIVD010000001;XM_032891710 XP_032747601 protein-coding 626155103 LOC116909194 uncharacterized LOC116909194 9 85831512 85832371 - 116909194 MODEL JAAIVD010000002;XR_004389057 ncrna 626155107 Vwa3b von Willebrand factor A domain containing 3B ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 22 (ortholog); Spinocerebellar Ataxias (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 4 113226681 113389453 + 116898476 MODEL JAAIVD010000003;XM_032899725 XP_032755616 von Willebrand factor A domain-containing protein 3B protein-coding 626155136 Ssuh2 ssu-2 homolog INVOLVED IN odontogenesis (ortholog); ASSOCIATED WITH dentin dysplasia (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 6 34119603 34138039 + 22301074 116904641 MODEL JAAIVD010000024;XM_032907433;XM_032907434 XP_032763324;XP_032763325 protein SSUH2 homolog protein-coding 626155152 LOC116912898 thymosin beta-10-like 11 12340942 12341153 + 116912898 MODEL JAAIVD010000006 pseudo 626155153 LOC116897449 U1 spliceosomal RNA 3 71807029 71807192 - 116897449 MODEL JAAIVD010000012;XR_004387483 snrna 626155156 LOC116913027 U2 spliceosomal RNA 11 64247469 64247607 - 116913027 MODEL JAAIVD010000006 pseudo 626155157 Ppic peptidylprolyl isomerase C ENCODES a protein that exhibits peptidyl-prolyl cis-trans isomerase activity (ortholog); ASSOCIATED WITH Stomach Neoplasms (ortholog) 15 78340801 78353391 + 22301074;30032202 116884757 MODEL JAAIVD010000010;XM_032885975 XP_032741866 peptidyl-prolyl cis-trans isomerase C protein-coding 626155166 LOC116895533 late cornified envelope protein 1D-like 3 120377197 120378000 - 22301074 116895533 MODEL JAAIVD010000012;XM_032896778 XP_032752669 protein-coding 626155170 Derl2 derlin 2 ENCODES a protein that exhibits protein-containing complex binding (ortholog); signal recognition particle binding (ortholog); INVOLVED IN endoplasmic reticulum unfolded protein response (ortholog); ERAD pathway (ortholog); negative regulation of retrograde protein transport, ER to cytosol (ortholog); FOUND IN early endosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 9 50632988 50642131 - 30032202 116908636 MODEL JAAIVD010000002;XM_032911891;XM_032911892;XM_032911893 XP_032767782;XP_032767783;XP_032767784 derlin-2 protein-coding 626155185 Atp5mc2 ATP synthase membrane subunit c locus 2 ENCODES a protein that exhibits ligand-gated channel activity (ortholog); INVOLVED IN pore complex assembly (ortholog); response to 3,3',5-triiodo-L-thyronine (ortholog); response to ethanol (ortholog); PARTICIPATES IN electron transport chain pathway; ASSOCIATED WITH clear cell renal cell carcinoma (ortholog); obesity (ortholog); renal cell carcinoma (ortholog); FOUND IN cation channel complex (ortholog); mitochondrion (ortholog) 1 260415380 260423860 + 22301074;30032202 116883312 MODEL JAAIVD010000025;XM_032884368;XM_032884376 XP_032740259;XP_032740267 ATP synthase F(0) complex subunit C2, mitochondrial protein-coding 626155199 LOC116905833 non-histone chromosomal protein HMG-17-like 7 106518455 106518755 - 116905833 MODEL JAAIVD010000026 pseudo 626155200 LOC116912996 small nucleolar RNA SNORA17 11 90203328 90203459 - 116912996 MODEL JAAIVD010000006;XR_004389559 snorna 626155203 Klhl11 kelch like family member 11 9 59767532 59778046 - 22301074 116910620 MODEL JAAIVD010000002;XM_032914569 XP_032770460 kelch-like protein 11 protein-coding 626155209 ND2 NADH dehydrogenase subunit 2 MT 3902 4937 + 7751800 A0A7L7S0E2;B7SE62 REVIEWED EU273707 ABX45234;YP_002791017 protein-coding 626155210 LOC116906911 zinc finger protein 426 8 16661931 16690052 + 30032202 116906911 MODEL JAAIVD010000027;XM_032909828;XM_032909829;XM_032909830;XM_032909831 XP_032765719;XP_032765720;XP_032765721;XP_032765722 protein-coding 626155230 Lix1 limb and CNS expressed 1 2 101202184 101257967 - 30032202 116891791 MODEL JAAIVD010000001;XM_032893143 XP_032749034 protein limb expression 1 homolog protein-coding 626155240 Slc12a4 solute carrier family 12 member 4 ENCODES a protein that exhibits ATP binding (ortholog); potassium:chloride symporter activity (ortholog); protein serine/threonine kinase binding (ortholog); INVOLVED IN potassium ion transmembrane transport (ortholog) 17 25683681 25704522 - 22301074;30032202 116886267 MODEL JAAIVD010000011;XM_032887688 XP_032743579 protein-coding 626155268 Utrn utrophin ENCODES a protein that exhibits actin binding (ortholog); actin filament binding (ortholog); integrin binding (ortholog); INVOLVED IN neuromuscular junction development (ortholog); positive regulation of cell-matrix adhesion (ortholog); response to denervation involved in regulation of muscle adaptation (ortholog); ASSOCIATED WITH Duchenne muscular dystrophy (ortholog); ovarian cancer (ortholog); FOUND IN ciliary basal body (ortholog); cilium (ortholog); contractile ring (ortholog) 2 224335773 224929717 + 22301074;30032202 116893015 MODEL JAAIVD010000001;XM_032894978 XP_032750869 protein-coding 626155345 Tgm5 transglutaminase 5 ASSOCIATED WITH genetic disease (ortholog); peeling skin syndrome 1 (ortholog); peeling skin syndrome 2 (ortholog) 5 99185673 99213139 - 22301074;30032202 116900600 MODEL JAAIVD010000023;XM_032902316 XP_032758207 protein-glutamine gamma-glutamyltransferase 5 protein-coding 626155355 Cant1 calcium activated nucleotidase 1 ENCODES a protein that exhibits ADP phosphatase activity (ortholog); calcium ion binding (ortholog); GDP phosphatase activity (ortholog); INVOLVED IN positive regulation of canonical NF-kappaB signal transduction (ortholog); proteoglycan biosynthetic process (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; dihydropyrimidinase deficiency pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH Desbuquois dysplasia (ortholog); Desbuquois Dysplasia 1 (ortholog); Dwarfism (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 9 65647889 65657437 + 22301074;30032202 116909354 MODEL JAAIVD010000002;XM_032912902 XP_032768793 soluble calcium-activated nucleotidase 1 protein-coding 626155364 Alpk1 alpha kinase 1 ENCODES a protein that exhibits monosaccharide binding (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN cilium assembly (ortholog); cytoplasmic pattern recognition receptor signaling pathway (ortholog); innate immune response (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); Diabetic Nephropathies (ortholog); genetic disease (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cilium (ortholog) 3 31564624 31674373 + 22301074;30032202 116896274 MODEL JAAIVD010000012;XM_032897354 XP_032753245 alpha-protein kinase 1 protein-coding 626155382 Vps41 VPS41 subunit of HOPS complex ENCODES a protein that exhibits identical protein binding (ortholog); microtubule binding (ortholog); INVOLVED IN endosomal vesicle fusion (ortholog); endosome to lysosome transport (ortholog); Golgi vesicle transport (ortholog); ASSOCIATED WITH autosomal recessive spinocerebellar ataxia 29 (ortholog); genetic disease (ortholog); hyperimmunoglobulinemia D periodic fever syndrome (ortholog); FOUND IN AP-3 adaptor complex (ortholog); clathrin complex (ortholog); clathrin-coated vesicle (ortholog) 14 37554182 37712370 + 22301074;30032202 116883879 MODEL JAAIVD010000009;XM_032885145 XP_032741036 vacuolar protein sorting-associated protein 41 homolog protein-coding 626155415 Runx3 RUNX family transcription factor 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN axon guidance (ortholog); cell maturation (ortholog); chondrocyte differentiation (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); adenocarcinoma (ortholog); ankylosing spondylitis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 1 23038182 23095863 - 22301074;30032202 116894570 MODEL JAAIVD010000025;XM_032896290;XM_032896298 XP_032752181;XP_032752189 runt-related transcription factor 3 protein-coding 626155428 LOC116912457 ankyrin repeat domain-containing protein 13A-like 11 19276730 19278507 - 116912457 MODEL JAAIVD010000006 pseudo 626155429 Hoxd1 homeobox D1 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN embryonic skeletal system development (ortholog); neuron differentiation (ortholog); sensory perception of pain (ortholog); ASSOCIATED WITH Colorectal Neoplasms (ortholog); Hyperalgesia (ortholog); Ovarian Neoplasms (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 5 52104661 52106820 + 22301074;30032202 116900213 MODEL JAAIVD010000023;XM_032901967 XP_032757858 homeobox protein Hox-D1 protein-coding 626155435 LOC116888221 potassium channel subfamily K member 6-like X 129034354 129041931 - 116888221 MODEL JAAIVD010000014 pseudo 626155436 LOC116903058 interferon alpha-12 1 123617973 123618669 - 22301074;30032202 116903058 MODEL JAAIVD010000025;XM_032905359 XP_032761250 protein-coding 626155440 Fzd8 frizzled class receptor 8 ENCODES a protein that exhibits PDZ domain binding (ortholog); signaling receptor binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN angiogenesis (ortholog); canonical Wnt signaling pathway (ortholog); T cell differentiation in thymus (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN neuronal dense core vesicle (ortholog); plasma membrane (ortholog); Wnt-Frizzled-LRP5/6 complex (ortholog) 14 27820233 27826429 + 30032202 116883620 MODEL JAAIVD010000009;XM_032884811 XP_032740702 frizzled-8 protein-coding 626155445 Cbarp CACN subunit beta associated regulatory protein ENCODES a protein that exhibits transmembrane transporter binding (ortholog); INVOLVED IN negative regulation of calcium ion transmembrane transport (ortholog); negative regulation of calcium ion-dependent exocytosis (ortholog); negative regulation of voltage-gated calcium channel activity (ortholog); FOUND IN growth cone (ortholog); plasma membrane (ortholog); secretory granule (ortholog) 1 154736446 154744835 + 30032202 116905345 MODEL JAAIVD010000025;XM_032908249 XP_032764140 voltage-dependent calcium channel beta subunit-associated regulatory protein protein-coding 626155459 Ndrg4 NDRG family member 4 INVOLVED IN cell migration involved in heart development (ortholog); negative regulation of platelet-derived growth factor receptor signaling pathway (ortholog); negative regulation of smooth muscle cell migration (ortholog); ASSOCIATED WITH glioblastoma (ortholog); hepatoblastoma (ortholog); high grade glioma (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell projection membrane (ortholog); cytoplasm (ortholog) 17 2498788 2534593 + 30032202 116886035 MODEL JAAIVD010000011;XM_032887328;XM_032887329;XM_032887330;XM_032887331;XM_032887332 XP_032743219;XP_032743220;XP_032743221;XP_032743222;XP_032743223 protein NDRG4 protein-coding 626155488 Ndufv3 NADH:ubiquinone oxidoreductase subunit V3 INVOLVED IN mitochondrial ATP synthesis coupled electron transport (ortholog); PARTICIPATES IN forkhead class A signaling pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); respiratory chain complex I (ortholog) 18 2337741 2347049 - 22301074;30032202 116887173 MODEL JAAIVD010000013;XM_032888723;XM_032888724 XP_032744614;XP_032744615 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial protein-coding 626155501 LOC116910316 transmembrane protein 92-like 9 50781399 50785218 + 30032202 116910316 MODEL JAAIVD010000002;XM_032914179 XP_032770070 protein-coding 626155507 Prr13 proline rich 13 ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog) 1 260617960 260621390 - 30032202 116883440 MODEL JAAIVD010000025;XM_032884588 XP_032740479 proline-rich protein 13 protein-coding 626155515 LOC116902962 60S ribosomal protein L36a-like 6 125398134 125398617 + 22301074;30032202 116902962 MODEL JAAIVD010000024;XM_032905286 XP_032761177 protein-coding 626155520 LOC116884738 dual specificity mitogen-activated protein kinase kinase 4-like 15 71686519 71687375 - 116884738 MODEL JAAIVD010000010 pseudo 626155521 LOC116895570 uncharacterized LOC116895570 1 25938518 25941380 - 116895570 MODEL JAAIVD010000025;XR_004387291 ncrna 626155528 LOC116909480 keratin-associated protein 4-12-like 9 54559082 54559713 - 22301074;30032202 116909480 MODEL JAAIVD010000002;XM_032913073;XM_032913074;XM_032913076 XP_032768964;XP_032768965;XP_032768967 keratin-associated protein 4-2-like;keratin-associated protein 4-3-like protein-coding 626155538 LOC116889884 R3H domain-containing protein 2-like 1 242605980 242663316 + 116889884 MODEL JAAIVD010000025 pseudo 626155539 Ash2l ASH2 like, histone lysine methyltransferase complex subunit ENCODES a protein that exhibits beta-catenin binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN DNA damage response (ortholog); positive regulation of cell population proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH Developmental Disabilities (ortholog); schizophrenia (ortholog); FOUND IN euchromatin (ortholog); histone methyltransferase complex (ortholog); MLL1 complex (ortholog) 13 60661410 60684115 + 22301074;30032202 116914288 MODEL JAAIVD010000008;XM_032918517;XM_032918518;XM_032918519 XP_032774408;XP_032774409;XP_032774410 set1/Ash2 histone methyltransferase complex subunit ASH2 protein-coding 626155566 LOC116906354 small nucleolar RNA SNORD113/SNORD114 family 7 127213094 127213174 + 116906354 MODEL JAAIVD010000026 pseudo 626155567 LOC116888746 olfactory receptor 6C1-like 1 232549045 232549980 + 116888746 MODEL JAAIVD010000025 pseudo 626155568 LOC116886637 40S ribosomal protein S15-like 17 18730924 18764768 + 116886637 MODEL JAAIVD010000011 pseudo 626155569 LOC116915151 U6atac minor spliceosomal RNA 13 42021005 42021118 + 116915151 MODEL JAAIVD010000008 pseudo 626155570 Ptar1 protein prenyltransferase alpha subunit repeat containing 1 FOUND IN mitochondrion (ortholog) 2 23790465 23827726 + 22301074;30032202 116891041 MODEL JAAIVD010000001;XM_032891725;XM_032891726 XP_032747616;XP_032747617 protein prenyltransferase alpha subunit repeat-containing protein 1 protein-coding 626155584 LOC116887331 olfactory receptor 2B11-like 18 11075140 11076078 - 22301074 116887331 MODEL JAAIVD010000013;XM_032888924 XP_032744815 protein-coding 626155587 LOC116900965 adenosylhomocysteinase-like 5 102409756 102410645 + 116900965 MODEL JAAIVD010000023 pseudo 626155588 Vav3 vav guanine nucleotide exchange factor 3 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); cell migration (ortholog); cell projection assembly (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; Fc epsilon receptor mediated signaling pathway; ASSOCIATED WITH hypertension (ortholog); Hyperventilation (ortholog); IgA glomerulonephritis (ortholog); FOUND IN cytoplasm (ortholog); immunological synapse (ortholog); plasma membrane (ortholog) 3 48730040 49061535 - 22301074;30032202 116896348 MODEL JAAIVD010000012;XM_032897450 XP_032753341 guanine nucleotide exchange factor VAV3 protein-coding 626155619 Ppp1r13b protein phosphatase 1 regulatory subunit 13B INVOLVED IN intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); positive regulation of cellular process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Childhood Schizophrenia (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 7 129428703 129499911 - 22301074;30032202 116905501 MODEL JAAIVD010000026;XM_032908521;XM_032908522 XP_032764412;XP_032764413 apoptosis-stimulating of p53 protein 1 protein-coding 626155643 Slc35c1 solute carrier family 35 member C1 ENCODES a protein that exhibits GDP-fucose transmembrane transporter activity (ortholog); INVOLVED IN 'de novo' GDP-L-fucose biosynthetic process (ortholog); GDP-fucose import into Golgi lumen (ortholog); GDP-L-fucose salvage (ortholog); ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IIc (ortholog); genetic disease (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi membrane (ortholog) 5 66632622 66640340 - 30032202 116901645 MODEL JAAIVD010000023;XM_032903746;XM_032903748;XM_032903749;XM_032903750 XP_032759637;XP_032759639;XP_032759640;XP_032759641 GDP-fucose transporter 1 protein-coding 626155657 Trnah-gug transfer RNA histidin (anticodon GUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60835910 60835981 + 116897666 MODEL JAAIVD010000012 trna 626155658 LOC116911756 olfactory receptor 10C1-like 10 52740146 52741084 + 22301074 116911756 MODEL JAAIVD010000005;XM_032915750 XP_032771641 protein-coding 626155661 Csrnp3 cysteine and serine rich nuclear protein 3 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); substance-related disorder (ortholog); FOUND IN nucleus (ortholog) 5 43298920 43475120 + 30032202 116901462 MODEL JAAIVD010000023;XM_032903410;XM_032903411;XM_032903412;XM_032903413;XM_032903414 XP_032759301;XP_032759302;XP_032759303;XP_032759304;XP_032759305 cysteine/serine-rich nuclear protein 3 protein-coding 626155682 LOC116891057 uncharacterized LOC116891057 2 26643429 26658587 + 116891057 MODEL JAAIVD010000001;XM_032891751;XR_004386804;XR_004386805;XR_004386806;XR_004386807;XR_004386808 XP_032747642 uncharacterized protein LOC116891057 protein-coding 626155698 LOC116896075 glyceraldehyde-3-phosphate dehydrogenase-like 3 210743853 210744219 + 116896075 MODEL JAAIVD010000012 pseudo 626155699 Trappc2 trafficking protein particle complex subunit 2 ENCODES a protein that exhibits transcription corepressor binding (ortholog); transcription regulator inhibitor activity (ortholog); transmembrane transporter binding (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); skeletal system development (ortholog); ASSOCIATED WITH genetic disease (ortholog); osteochondrodysplasia (ortholog); spondyloepiphyseal dysplasia congenita (ortholog); FOUND IN endoplasmic reticulum (ortholog); nuclear outer membrane (ortholog); nucleoplasm (ortholog) X 30556280 30567337 + 22301074;30032202 116889269 MODEL JAAIVD010000014;XM_032890411;XM_032890412 XP_032746302;XP_032746303 trafficking protein particle complex 2 protein-coding 626155712 Syt6 synaptotagmin 6 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); calcium-dependent protein binding (ortholog); clathrin binding (ortholog); INVOLVED IN acrosomal vesicle exocytosis (ortholog); acrosome reaction (ortholog); postsynaptic dense core vesicle exocytosis (ortholog); ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); glutamatergic synapse (ortholog) 3 54427342 54484139 - 22301074;30032202 116896446 MODEL JAAIVD010000012;XM_032897599 XP_032753490 synaptotagmin-6 protein-coding 626155723 LOC116913241 proteasome subunit alpha type-3-like 12 77291699 77292475 - 116913241 MODEL JAAIVD010000007 pseudo 626155724 LOC116886718 small nucleolar RNA SNORD55/SNORD39 17 24715754 24715803 + 116886718 MODEL JAAIVD010000011;XR_004386130 snorna 626155727 LOC116907327 uncharacterized LOC116907327 8 82144708 82158206 + 116907327 MODEL JAAIVD010000027;XR_004388817 ncrna 626155732 LOC116889294 60S ribosomal protein L19-like X 64952603 64953236 - 116889294 MODEL JAAIVD010000014 pseudo 626155733 LOC116898571 UDP-glucuronosyltransferase 1-9-like 4 160159743 160161827 + 22301074 116898571 MODEL JAAIVD010000003;XM_032899777 XP_032755668 protein-coding 626155738 LOC116897987 mortality factor 4-like protein 1 4 54911200 54912395 - 22301074;30032202 116897987 MODEL JAAIVD010000003;XM_032899388 XP_032755279 protein-coding 626155743 LOC116884900 60S ribosomal protein L7-like 15 3577097 3605611 - 116884900 MODEL JAAIVD010000010 pseudo 626155744 LOC116905457 S-phase kinase-associated protein 1-like 7 126486989 126488226 + 116905457 MODEL JAAIVD010000026 pseudo 626155745 Med16 mediator complex subunit 16 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN positive regulation of DNA-templated transcription (ortholog); positive regulation of transcription initiation by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH endometriosis (ortholog); Guillouet-Gordon syndrome (ortholog); syndromic intellectual disability (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 1 154966826 154978539 + 22301074;30032202 116905520 MODEL JAAIVD010000025;XM_032908546;XM_032908555;XM_032908565;XM_032908572;XM_032908577;XM_032908579;XM_032908585 XP_032764437;XP_032764446;XP_032764456;XP_032764463;XP_032764468;XP_032764470;XP_032764476 mediator of RNA polymerase II transcription subunit 16 protein-coding 626155780 LOC116885109 small nucleolar RNA SNORD63 15 9421181 9421253 + 116885109 MODEL JAAIVD010000010;XR_004385974 snorna 626155783 Marchf7 membrane associated ring-CH-type finger 7 ENCODES a protein that exhibits enzyme binding (ortholog); MDM2/MDM4 family protein binding (ortholog); ubiquitin binding (ortholog); INVOLVED IN cilium assembly (ortholog); negative regulation of cilium assembly (ortholog); negative regulation of DNA damage response, signal transduction by p53 class mediator (ortholog); FOUND IN centrosome (ortholog); ciliary basal body (ortholog); cytosol (ortholog) 5 37886888 37926350 + 22301074;30032202 116901439 MODEL JAAIVD010000023;XM_032903364;XM_032903365;XM_032903366;XR_004387993;XR_004387994 XP_032759255;XP_032759256;XP_032759257 E3 ubiquitin-protein ligase MARCH7 protein-coding 626155808 LOC116888910 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2-like 1 109214364 109215253 + 116888910 MODEL JAAIVD010000025 pseudo 626155809 LOC116899578 histone H3.3A-like 4 157756834 157757538 - 116899578 MODEL JAAIVD010000003 pseudo 626155810 Ak1 adenylate kinase 1 ENCODES a protein that exhibits AMP kinase activity (ortholog); nucleoside diphosphate kinase activity (ortholog); phosphotransferase activity, phosphate group as acceptor (ortholog); INVOLVED IN ADP biosynthetic process (ortholog); AMP metabolic process (ortholog); cerebellum development (ortholog); PARTICIPATES IN adefovir pharmacokinetics pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH congenital nonspherocytic hemolytic anemia (ortholog); congenital nonspherocytic hemolytic anemia 3 (ortholog); hemolytic anemia (ortholog); FOUND IN cytoplasm (ortholog); outer dense fiber (ortholog); perinuclear region of cytoplasm (ortholog) 5 3006387 3016445 - 22301074;30032202 116901138 MODEL JAAIVD010000023;XM_032902739 XP_032758630 adenylate kinase isoenzyme 1 protein-coding 626155821 LOC116914522 putative protein FAM90A7P 13 64532596 64540888 - 116914522 MODEL JAAIVD010000008;XM_032918853 XP_032774744 protein-coding 626155827 Znf467 zinc finger protein 467 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN regulation of DNA-templated transcription (ortholog); FOUND IN nucleus (ortholog) 6 92523142 92531739 + 30032202 116903861 MODEL JAAIVD010000024;XM_032906604;XM_032906605;XM_032906606 XP_032762495;XP_032762496;XP_032762497 protein-coding 626155841 Cpn1 carboxypeptidase N subunit 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); INVOLVED IN bradykinin catabolic process (ortholog); protein catabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN kallikrein-kinin cascade pathway; ASSOCIATED WITH carboxypeptidase N deficiency (ortholog); FOUND IN extracellular space (ortholog) 2 43487796 43515647 - 22301074 116891202 MODEL JAAIVD010000001;XM_032892027 XP_032747918 carboxypeptidase N catalytic chain protein-coding 626155854 Ankrd29 ankyrin repeat domain 29 15 31363338 31415845 + 30032202 116884648 MODEL JAAIVD010000010;XM_032885804;XM_032885805;XM_032885806 XP_032741695;XP_032741696;XP_032741697 ankyrin repeat domain-containing protein 29 protein-coding 626155872 Cops7b COP9 signalosome subunit 7B INVOLVED IN protein deneddylation (ortholog); FOUND IN COP9 signalosome (ortholog); nucleoplasm (ortholog) 4 158722236 158747414 + 22301074;30032202 116899592 MODEL JAAIVD010000003;XM_032901532;XM_032901534 XP_032757423;XP_032757425 COP9 signalosome complex subunit 7b protein-coding 626155886 LOC116894578 vomeronasal type-1 receptor 4-like 2 180305996 180306909 - 22301074;30032202 116894578 MODEL JAAIVD010000001;XM_032896301 XP_032752192 protein-coding 626155889 Aifm1 apoptosis inducing factor mitochondria associated 1 ENCODES a protein that exhibits DNA binding (ortholog); FAD binding (ortholog); NAD(P)H oxidase H2O2-forming activity (ortholog); INVOLVED IN apoptotic process (ortholog); cellular response to aldosterone (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN ceramide signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Brain Hypoxia-Ischemia (ortholog); Brain Injuries (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrial intermembrane space (ortholog) X 109900886 109940017 + 22301074;30032202 116888450 MODEL JAAIVD010000014;XM_032889729;XM_032889730 XP_032745620;XP_032745621 apoptosis-inducing factor 1, mitochondrial protein-coding 626155913 Ptger4 prostaglandin E receptor 4 ENCODES a protein that exhibits prostaglandin E receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Alzheimer's disease (ortholog); ankylosing spondylitis (ortholog); FOUND IN neuron projection terminus (ortholog); neuronal cell body (ortholog); nuclear membrane (ortholog) 3 175079411 175092265 + 22301074;30032202 116897150 MODEL JAAIVD010000012;XM_032898818 XP_032754709 prostaglandin E2 receptor EP4 subtype protein-coding 626155920 Clec9a C-type lectin domain containing 9A INVOLVED IN positive regulation of cytokine production (ortholog); receptor-mediated endocytosis (ortholog); FOUND IN cell surface (ortholog) 6 18169837 18184546 - 30032202 116904563 MODEL JAAIVD010000024;XM_032907360;XM_032907361 XP_032763251;XP_032763252 C-type lectin domain family 9 member A protein-coding 626155934 LOC116893768 60S acidic ribosomal protein P1-like 2 30012514 30012952 - 22301074;30032202 116893768 MODEL JAAIVD010000001;XM_032895470 XP_032751361 protein-coding 626155939 Calhm4 calcium homeostasis modulator family member 4 ASSOCIATED WITH epilepsy (ortholog) 18 24306068 24308788 + 30032202 116886910 MODEL JAAIVD010000013;XM_032888376 XP_032744267 calcium homeostasis modulator protein 4 protein-coding 626155943 LOC116904978 ubiquitin-conjugating enzyme E2 variant 2-like 7 49877647 49878099 - 116904978 MODEL JAAIVD010000026 pseudo 626155944 Tmem116 transmembrane protein 116 FOUND IN endoplasmic reticulum membrane (ortholog) 16 32311406 32357642 - 30032202 116885265 MODEL JAAIVD010000004;XM_032886498 XP_032742389 protein-coding 626155959 Paqr4 progestin and adipoQ receptor family member 4 ENCODES a protein that exhibits molecular adaptor activity (ortholog); INVOLVED IN protein stabilization (ortholog); regulation of ceramide biosynthetic process (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Neoplasm Recurrence, Local (ortholog); Prostatic Neoplasms (ortholog); FOUND IN Golgi membrane (ortholog) 9 1035271 1038965 - 22301074;30032202 116908995 MODEL JAAIVD010000002;XM_032912464 XP_032768355 protein-coding 626155966 F7 coagulation factor VII ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); signaling receptor binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); blood coagulation (ortholog); circadian rhythm (ortholog); PARTICIPATES IN acenocoumarol pharmacodynamics pathway; alteplase pharmacodynamics pathway; aminocaproic acid pharmacodynamics pathway; ASSOCIATED WITH acquired angioedema (ortholog); Acute Liver Failure (ortholog); acute pancreatitis (ortholog); FOUND IN extracellular space (ortholog); serine-type peptidase complex (ortholog); vesicle (ortholog) 13 70652716 70662547 - 22301074;30032202 116914520 MODEL JAAIVD010000008;XM_032918851 XP_032774742 protein-coding 626155976 Tmppe transmembrane protein with metallophosphoesterase domain 8 105006566 105012146 + 22301074 116907816 MODEL JAAIVD010000027;XM_032910992;XM_032910994;XM_032910995 XP_032766883;XP_032766885;XP_032766886 protein-coding 626155987 LOC116899249 thioredoxin-like 1 47409805 47410316 - 22301074 116899249 MODEL JAAIVD010000025;XM_032900858 XP_032756749 protein-coding 626155992 LOC116900111 elongation factor 1-alpha 1-like 5 13046053 13047066 + 22301074;30032202 116900111 MODEL JAAIVD010000023;XM_032901888 XP_032757779 protein-coding 626155996 LOC116889150 protein MIS12 homolog 1 236779313 236779921 - 116889150 MODEL JAAIVD010000025 pseudo 626155997 LOC116905635 histone-binding protein RBBP4-like 7 23941105 23942370 - 116905635 MODEL JAAIVD010000026 pseudo 626155998 Rin1 Ras and Rab interactor 1 ENCODES a protein that exhibits small GTPase binding (ortholog); INVOLVED IN associative learning (ortholog); memory (ortholog); negative regulation of synaptic plasticity (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 2 2597408 2602895 - 22301074;30032202 116890743 MODEL JAAIVD010000001;XM_032891200 XP_032747091 protein-coding 626156012 LOC116904788 U2 spliceosomal RNA 6 13157408 13157597 - 116904788 MODEL JAAIVD010000024;XR_004388452 snrna 626156015 Traf4 TNF receptor associated factor 4 ENCODES a protein that exhibits identical protein binding (ortholog); protein kinase binding (ortholog); thioesterase binding (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); positive regulation of protein kinase activity (ortholog); respiratory gaseous exchange by respiratory system (ortholog); ASSOCIATED WITH Brain Injuries (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 9 92274093 92280583 + 22301074 116909046 MODEL JAAIVD010000002;XM_032912527;XM_032912528 XP_032768418;XP_032768419 TNF receptor-associated factor 4 protein-coding 626156029 Rnf31 ring finger protein 31 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin binding (ortholog); ubiquitin protein ligase activity (ortholog); INVOLVED IN canonical NF-kappaB signal transduction (ortholog); CD40 signaling pathway (ortholog); defense response to bacterium (ortholog); PARTICIPATES IN nuclear factor kappa B signaling pathway; tumor necrosis factor mediated signaling pathway; ASSOCIATED WITH Dwarfism (ortholog); immunodeficiency 115 (ortholog); Polyglucosan Body Myopathy 1 with or without Immunodeficiency (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog) 12 69403147 69415652 - 22301074;30032202 116913313 MODEL JAAIVD010000007;XM_032917456 XP_032773347 E3 ubiquitin-protein ligase RNF31 protein-coding 626156054 LOC116886299 serine/arginine-rich splicing factor 7-like 1 215512806 215513530 - 116886299 MODEL JAAIVD010000025 pseudo 626156055 Il1rl2 interleukin 1 receptor like 2 INVOLVED IN cytokine-mediated signaling pathway (ortholog); inflammatory response (ortholog); positive regulation of interleukin-6 production (ortholog); ASSOCIATED WITH aortic dissection (ortholog); Myocardial Reperfusion Injury (ortholog) 4 116568595 116608993 + 22301074;30032202 116898149 MODEL JAAIVD010000003;XM_032899526;XM_032899527 XP_032755417;XP_032755418 interleukin-1 receptor-like 2 protein-coding 626156074 Pex16 peroxisomal biogenesis factor 16 INVOLVED IN ER-dependent peroxisome localization (ortholog); ER-dependent peroxisome organization (ortholog); peroxisome membrane biogenesis (ortholog); ASSOCIATED WITH genetic disease (ortholog); infantile Refsum disease (ortholog); methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency (ortholog); FOUND IN endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog); peroxisomal membrane (ortholog) 5 66514039 66519431 + 30032202 116901641 MODEL JAAIVD010000023;XM_032903741 XP_032759632 protein-coding 626156089 LOC116898515 reticulocalbin-1-like 4 132892666 132907410 + 116898515 MODEL JAAIVD010000003 pseudo 626156090 Brinp1 BMP/retinoic acid inducible neural specific 1 INVOLVED IN behavioral fear response (ortholog); brain development (ortholog); cell population proliferation (ortholog); ASSOCIATED WITH attention deficit hyperactivity disorder (ortholog); autism spectrum disorder (ortholog); FOUND IN cytoplasm (ortholog); glutamatergic synapse (ortholog); synapse (ortholog) 1 84200933 84391027 + 22301074;30032202 116901180 MODEL JAAIVD010000025;XM_032902854 XP_032758745 BMP/retinoic acid-inducible neural-specific protein 1 protein-coding 626156102 LOC116896547 40S ribosomal protein S27-like 3 61703801 61704074 - 116896547 MODEL JAAIVD010000012 pseudo 626156103 LOC116907415 triosephosphate isomerase-like 8 21108253 21112592 - 22301074;30032202 116907415 MODEL JAAIVD010000027;XM_032910377 XP_032766268 protein-coding 626156109 Plxdc1 plexin domain containing 1 INVOLVED IN spinal cord development (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 9 56400070 56458129 + 116909507 MODEL JAAIVD010000002;XM_032913113 XP_032769004 plexin domain-containing protein 1 protein-coding 626156127 LOC116897425 U1 spliceosomal RNA 3 60915168 60915326 + 116897425 MODEL JAAIVD010000012;XR_004387467 snrna 626156130 LOC116913913 peptidyl-prolyl cis-trans isomerase A-like 12 27147865 27148458 + 22301074 116913913 MODEL JAAIVD010000007;XM_032918189 XP_032774080 protein-coding 626156134 Nle1 notchless homolog 1 INVOLVED IN hematopoietic stem cell homeostasis (ortholog); inner cell mass cell differentiation (ortholog); kidney development (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog) 9 87606998 87615889 + 22301074;30032202 116909728 MODEL JAAIVD010000002;XM_032913405 XP_032769296 notchless protein homolog 1 protein-coding 626156150 LOC116899467 60S ribosomal protein L5-like 4 140009938 140010876 - 116899467 MODEL JAAIVD010000003 pseudo 626156151 LOC116902631 small nucleolar RNA SNORA11 5 90826075 90826203 + 116902631 MODEL JAAIVD010000023;XR_004388208 snorna 626156154 LOC116897059 GON-4-like protein 3 153109265 153141802 - 30032202 116897059 MODEL JAAIVD010000012;XM_032898682 XP_032754573 protein-coding 626156170 Tiprl TOR signaling pathway regulator ENCODES a protein that exhibits protein phosphatase inhibitor activity (ortholog); INVOLVED IN DNA damage checkpoint signaling (ortholog) 10 44376693 44401226 - 30032202 116911119 MODEL JAAIVD010000005;XM_032914965 XP_032770856 TIP41-like protein protein-coding 626156181 LOC116900461 olfactory receptor 4A16-like 5 71228862 71229811 - 116900461 MODEL JAAIVD010000023 pseudo 626156182 Mapk15 mitogen-activated protein kinase 15 ENCODES a protein that exhibits chromatin binding (ortholog); kinase activity (ortholog); MAP kinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); dopamine uptake (ortholog); endoplasmic reticulum organization (ortholog); ASSOCIATED WITH breast cancer (ortholog); Experimental Neoplasms (ortholog); urinary bladder cancer (ortholog); FOUND IN autophagosome (ortholog); axoneme (ortholog); cell-cell junction (ortholog) 1 248300863 248320136 + 22301074;30032202 116912715 MODEL JAAIVD010000025;XM_032916845;XM_032916853;XM_032916860 XP_032772736;XP_032772744;XP_032772751 protein-coding 626156207 Rab23 RAB23, member RAS oncogene family ENCODES a protein that exhibits GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); cellular defense response (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH bladder exstrophy-epispadias-cloacal exstrophy complex (ortholog); Carpenter syndrome (ortholog); Carpenter syndrome 1 (ortholog); FOUND IN autophagosome (ortholog); cell junction (ortholog); centrosome (ortholog) 4 109970486 109993299 + 22301074 116899266 MODEL JAAIVD010000003;XM_032900885;XM_032900886;XM_032900887 XP_032756776;XP_032756777;XP_032756778 ras-related protein Rab-23 protein-coding 626156223 Sema7a semaphorin 7A (JohnMiltonHagen blood group) ENCODES a protein that exhibits integrin binding (ortholog); INVOLVED IN axon extension (ortholog); integrin-mediated signaling pathway (ortholog); neuron projection development (ortholog); ASSOCIATED WITH Progressive Familial Intrahepatic Cholestasis 11 (ortholog); FOUND IN external side of plasma membrane (ortholog); GABA-ergic synapse (ortholog); presynapse (ortholog) 8 51809991 51832759 + 30032202 116906715 MODEL JAAIVD010000027;XM_032909522 XP_032765413 semaphorin 7A (John Milton Hagen blood group);semaphorin-7A protein-coding 626156241 LOC116914664 peptidyl-prolyl cis-trans isomerase NIMA-interacting 1-like 13 28223120 28224661 - 116914664 MODEL JAAIVD010000008 pseudo 626156242 Npas4 neuronal PAS domain protein 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity, RNA polymerase II-specific (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN cellular response to corticosterone stimulus (ortholog); cellular response to stress (ortholog); excitatory postsynaptic potential (ortholog); ASSOCIATED WITH microcephaly (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 2 2671849 2677511 + 22301074;30032202 116890749 MODEL JAAIVD010000001;XM_032891205 XP_032747096 neuronal PAS domain-containing protein 4 protein-coding 626156254 Rps7 ribosomal protein S7 ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); mRNA 5'-UTR binding (ortholog); poly(U) RNA binding (ortholog); INVOLVED IN negative regulation of ubiquitin protein ligase activity (ortholog); negative regulation of ubiquitin-dependent protein catabolic process (ortholog); neural crest cell differentiation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN centrosome (ortholog); cytosol (ortholog); cytosolic ribosome (ortholog) 7 42083902 42088841 - 22301074;30032202 116904929 MODEL JAAIVD010000026;X53377;XM_032907559 CAA37457;XP_032763450 40S ribosomal protein S7 protein-coding 626156265 Spon1 spondin 1 ENCODES a protein that exhibits LBD domain binding (ortholog); INVOLVED IN negative regulation of amyloid-beta formation (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); positive regulation of protein processing (ortholog); ASSOCIATED WITH COVID-19 (ortholog) 2 87471464 87746763 - 30032202 116891636 MODEL JAAIVD010000001;XM_032892851 XP_032748742 spondin-1 protein-coding 626156285 LOC116903713 elongation factor 1-gamma-like 6 8609913 8764090 + 116903713 MODEL JAAIVD010000024 pseudo 626156286 LOC116912047 pleckstrin-like 11 85403115 85427641 - 116912047 MODEL JAAIVD010000006 pseudo 626156287 LOC116890500 small nucleolar RNA SNORA48 1 57406595 57406740 - 116890500 MODEL JAAIVD010000025;XR_004386686 snorna 626156290 Traf6 TNF receptor associated factor 6 ENCODES a protein that exhibits histone deacetylase binding (ortholog); identical protein binding (ortholog); protein kinase B binding (ortholog); INVOLVED IN activation of protein kinase activity (ortholog); animal organ morphogenesis (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); PARTICIPATES IN interleukin-1 signaling pathway; nuclear factor kappa B signaling pathway; p38 MAPK signaling pathway; ASSOCIATED WITH alcohol use disorder (ortholog); coronary artery disease (ortholog); hypertrophic cardiomyopathy (ortholog); FOUND IN CD40 receptor complex (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 5 79516005 79535306 + 22301074;30032202 116901672 MODEL JAAIVD010000023;XM_032903784;XM_032903785 XP_032759675;XP_032759676 TNF receptor-associated factor 6 protein-coding 626156303 Agrn agrin ENCODES a protein that exhibits acetylcholine receptor regulator activity (ortholog); ATPase inhibitor activity (ortholog); BMP binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); circadian rhythm (ortholog); enzyme-linked receptor protein signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH acute myeloid leukemia (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 10 (ortholog); FOUND IN axonal growth cone (ortholog); basement membrane (ortholog); cell surface (ortholog) 1 4471041 4503769 + 22301074 116891784 MODEL JAAIVD010000025;XM_032893132;XM_032893140;XM_032893148;XM_032893156 XP_032749023;XP_032749031;XP_032749039;XP_032749047 protein-coding 626156353 LOC116897428 U6 spliceosomal RNA 3 184623970 184624078 - 116897428 MODEL JAAIVD010000012;XR_004387469 snrna 626156356 LOC116897441 U6 spliceosomal RNA 3 63444196 63444299 - 116897441 MODEL JAAIVD010000012;XR_004387477 snrna 626156359 LOC116888012 tRNA (uracil(54)-C(5))-methyltransferase homolog X 79558028 79579892 + 116888012 MODEL JAAIVD010000014 pseudo 626156360 LOC116893118 putative uncharacterized protein ZNRD1-AS1 2 71558834 71559361 - 116893118 MODEL JAAIVD010000001;XM_032895056 XP_032750947 protein-coding 626156363 Prrg1 proline rich and Gla domain 1 18 45061099 45111025 - 22301074;30032202 116887303 MODEL JAAIVD010000013;XM_032888884;XM_032888885 XP_032744775;XP_032744776 transmembrane gamma-carboxyglutamic acid protein 1 protein-coding 626156374 LOC116897650 U2 spliceosomal RNA 3 97542093 97542199 - 116897650 MODEL JAAIVD010000012 pseudo 626156375 Fem1a fem-1 homolog A ENCODES a protein that exhibits EP4 subtype prostaglandin E2 receptor binding (ortholog); molecular adaptor activity (ortholog); ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN MAPK cascade (ortholog); negative regulation of inflammatory response (ortholog); positive regulation of inflammatory response (ortholog); FOUND IN Cul2-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); mitochondrion (ortholog) 4 87649248 87653562 + 22301074 116899176 MODEL JAAIVD010000003;XM_032900747 XP_032756638 protein fem-1 homolog A protein-coding 626156380 Cdk5 cyclin dependent kinase 5 ENCODES a protein that exhibits acetylcholine receptor activator activity (ortholog); cyclin-dependent protein serine/threonine kinase activity (ortholog); cytoskeletal protein binding (ortholog); INVOLVED IN apoptotic process (ortholog); associative learning (ortholog); axonogenesis (ortholog); PARTICIPATES IN dopamine signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; Reelin signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); amphetamine abuse (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN axon (ortholog); cell junction (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 6 153610994 153616388 - 22301074;30032202 116904207 MODEL JAAIVD010000024;XM_032907131 XP_032763022 cyclin-dependent-like kinase 5 protein-coding 626156396 C3H4orf54 chromosome 3 C4orf54 homolog 3 21086097 21098989 - 116896213 MODEL JAAIVD010000012;XM_032897266 XP_032753157 uncharacterized protein C4orf54 homolog protein-coding 626156402 Rflna refilin A 16 28910125 28919138 - 22301074;30032202 116885462 MODEL JAAIVD010000004;XM_032886744 XP_032742635 refilin-A protein-coding 626156409 Syt2 synaptotagmin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium-dependent phospholipid binding (ortholog); inositol 1,3,4,5 tetrakisphosphate binding (ortholog); INVOLVED IN calcium-dependent activation of synaptic vesicle fusion (ortholog); positive regulation of dendrite extension (ortholog); ASSOCIATED WITH axonal neuropathy (ortholog); congenital myasthenic syndrome (ortholog); congenital myasthenic syndrome 7 (ortholog); FOUND IN axon (ortholog); neuromuscular junction (ortholog); plasma membrane (ortholog) 10 954071 997360 - 30032202 116911267 MODEL JAAIVD010000005;XM_032915173 XP_032771064 synaptotagmin-2 protein-coding 626156422 Arid2 AT-rich interaction domain 2 ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN cardiac muscle cell proliferation (ortholog); circulatory system development (ortholog); coronary artery morphogenesis (ortholog); PARTICIPATES IN SWI/SNF family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); Coffin-Siris syndrome (ortholog); Coffin-Siris syndrome 1 (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog); SWI/SNF complex (ortholog) 1 269125976 269246015 + 22301074;30032202 116884417 MODEL JAAIVD010000025;XM_032885512 XP_032741403 AT-rich interactive domain-containing protein 2 protein-coding 626156447 LOC116905162 60S ribosomal protein L26-like 7 87571232 87571650 - 22301074;30032202 116905162 MODEL JAAIVD010000026;XM_032907936 XP_032763827 protein-coding 626156452 LOC116908387 small nucleolar RNA SNORA48 8 97862275 97862418 + 116908387 MODEL JAAIVD010000027;XR_004388932 snorna 626156455 LOC116897742 egl nine homolog 1-like 4 81645 84834 - 116897742 MODEL JAAIVD010000003 pseudo 626156456 Maip1 matrix AAA peptidase interacting protein 1 INVOLVED IN calcium import into the mitochondrion (ortholog); mitochondrial calcium ion homeostasis (ortholog); protein insertion into mitochondrial membrane (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrion (ortholog) 4 132259762 132267613 + 30032202 116899404 MODEL JAAIVD010000003;XM_032901139 XP_032757030 m-AAA protease-interacting protein 1, mitochondrial protein-coding 626156465 Polr2c RNA polymerase II subunit C INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH Deafness (ortholog); hereditary breast ovarian cancer syndrome (ortholog); infertility (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 17 1733592 1740314 + 22301074;30032202 116886143 MODEL JAAIVD010000011;XM_032887496 XP_032743387 DNA-directed RNA polymerase II subunit RPB3 protein-coding 626156478 Slc9a8 solute carrier family 9 member A8 ENCODES a protein that exhibits potassium:proton antiporter activity (ortholog); sodium:proton antiporter activity (ortholog); INVOLVED IN acrosome assembly (ortholog); potassium ion transport (ortholog); proton transmembrane transport (ortholog); ASSOCIATED WITH dementia (ortholog); FOUND IN acrosomal vesicle (ortholog); apical plasma membrane (ortholog); Golgi apparatus (ortholog) 5 150518065 150565706 - 22301074;30032202 116902312 MODEL JAAIVD010000023;XM_032904757;XM_032904758 XP_032760648;XP_032760649 sodium/hydrogen exchanger 8 protein-coding 626156503 LOC116906473 small nucleolar RNA SNORA17 7 61911039 61911170 + 116906473 MODEL JAAIVD010000026;XR_004388723 snorna 626156506 Shisal2a shisa like 2A 1 46475020 46490450 + 116887482 MODEL JAAIVD010000025;XM_032889105 XP_032744996 protein shisa-like-2A protein-coding 626156511 LOC116893703 olfactory receptor 5B3-like 2 13206186 13207112 + 22301074;30032202 116893703 MODEL JAAIVD010000001;XM_032895419 XP_032751310 protein-coding 626156515 LOC116911646 60S ribosomal protein L7-like 10 36092913 36094540 + 116911646 MODEL JAAIVD010000005 pseudo 626156516 LOC116906189 glyceraldehyde-3-phosphate dehydrogenase-like 7 116445166 116445853 + 116906189 MODEL JAAIVD010000026 pseudo 626156517 Hook3 hook microtubule tethering protein 3 ENCODES a protein that exhibits dynactin binding (ortholog); dynein intermediate chain binding (ortholog); dynein light chain binding (ortholog); INVOLVED IN cytoplasmic microtubule organization (ortholog); early endosome to late endosome transport (ortholog); endosome organization (ortholog); ASSOCIATED WITH Dwarfism (ortholog); polycystic ovary syndrome (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cis-Golgi network (ortholog) 13 60382677 60470256 + 22301074;30032202 116914781 MODEL JAAIVD010000008;XM_032919229;XM_032919230 XP_032775120;XP_032775121 protein Hook homolog 3 protein-coding 626156548 LOC116910332 myosin light chain 4 9 62053437 62055296 - 22301074;2326197;30032202 116910332 MODEL JAAIVD010000002;X51531;XM_032914191 CAA35911;XP_032770082 protein-coding 626156554 Acot8 acyl-CoA thioesterase 8 ENCODES a protein that exhibits choloyl-CoA hydrolase activity (ortholog); fatty acyl-CoA hydrolase activity (ortholog); long-chain fatty acyl-CoA hydrolase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); alpha-linolenic acid metabolic process (ortholog); dicarboxylic acid catabolic process (ortholog); FOUND IN peroxisomal matrix (ortholog); peroxisome (ortholog) 5 153152023 153163823 + 22301074;30032202 116902348 MODEL JAAIVD010000023;XM_032904831;XM_032904832;XM_032904833;XM_032904834 XP_032760722;XP_032760723;XP_032760724;XP_032760725 acyl-coenzyme A thioesterase 8 protein-coding 626156576 Fam193a family with sequence similarity 193 member A 11 70582380 70696053 - 116912471 MODEL JAAIVD010000006;XM_032916538 XP_032772429 protein FAM193A protein-coding 626156600 LOC116911440 40S ribosomal protein S2-like 10 32414564 32415421 - 116911440 MODEL JAAIVD010000005 pseudo 626156601 Trmt10c tRNA methyltransferase 10C, mitochondrial RNase P subunit ENCODES a protein that exhibits identical protein binding (ortholog); tRNA (adenine(9)-N1)-methyltransferase activity (ortholog); tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); INVOLVED IN mitochondrial RNA 5'-end processing (ortholog); mitochondrial tRNA 3'-end processing (ortholog); mitochondrial tRNA 5'-end processing (ortholog); ASSOCIATED WITH combined oxidative phosphorylation deficiency 30 (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrial nucleoid (ortholog); mitochondrial ribonuclease P complex (ortholog); mitochondrion (ortholog) 4 40166208 40170553 - 22301074;30032202 116898900 MODEL JAAIVD010000003;XM_032900298 XP_032756189 tRNA methyltransferase 10 homolog C protein-coding 626156608 LOC116897832 arylacetamide deacetylase-like 4 4 11326929 11338934 + 116897832 MODEL JAAIVD010000003 pseudo 626156609 Sh2d7 SH2 domain containing 7 8 48599783 48611234 + 30032202 116907308 MODEL JAAIVD010000027;XM_032910253;XM_032910255 XP_032766144;XP_032766146 SH2 domain-containing protein 7 protein-coding 626156622 LOC116907073 uncharacterized LOC116907073 8 88190304 88194941 + 116907073 MODEL JAAIVD010000027;XR_004388802 ncrna 626156626 LOC116908225 40S ribosomal protein S18-like 8 77637442 77637901 + 116908225 MODEL JAAIVD010000027 pseudo 626156627 LOC116883226 tubulin beta-4B chain-like 14 52659790 52660410 - 22301074;30032202 116883226 MODEL JAAIVD010000009;XM_032884240 XP_032740131 protein-coding 626156631 LOC116900317 olfactory receptor 1052-like 5 64265831 64266769 - 22301074;30032202 116900317 MODEL JAAIVD010000023;XM_032902074 XP_032757965 protein-coding 626156634 Trim13 tripartite motif containing 13 ENCODES a protein that exhibits transcription coactivator activity (ortholog); ubiquitin-like protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN ERAD pathway (ortholog); innate immune response (ortholog); negative regulation of viral transcription (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); perinuclear endoplasmic reticulum (ortholog) 12 62817742 62826087 - 22301074;30032202 116913437 MODEL JAAIVD010000007;XM_032917637 XP_032773528 E3 ubiquitin-protein ligase TRIM13 protein-coding 626156640 Il20ra interleukin 20 receptor subunit alpha ENCODES a protein that exhibits interleukin-20 binding (ortholog); INVOLVED IN cytokine-mediated signaling pathway (ortholog); positive regulation of intrinsic apoptotic signaling pathway (ortholog); regulation of bone resorption (ortholog); ASSOCIATED WITH Spontaneous Abortions (ortholog); toxic shock syndrome (ortholog) 2 216823192 216866270 - 30032202 116892979 MODEL JAAIVD010000001;XM_032894938 XP_032750829 interleukin-20 receptor subunit alpha protein-coding 626156651 Wdfy3 WD repeat and FYVE domain containing 3 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN aggrephagy (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant intellectual developmental disorder 1 (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN Atg12-Atg5-Atg16 complex (ortholog); autophagosome (ortholog); autophagosome membrane (ortholog) 11 12015708 12183765 - 22301074 116912275 MODEL JAAIVD010000006;XM_032916265;XM_032916266;XM_032916267;XM_032916268;XM_032916269;XM_032916271 XP_032772156;XP_032772157;XP_032772158;XP_032772159;XP_032772160;XP_032772162 WD repeat and FYVE domain-containing protein 3 protein-coding 626156733 LOC116906186 serine protease inhibitor A3B-like 7 115280155 115282954 + 116906186 MODEL JAAIVD010000026 pseudo 626156734 LOC116885333 vomeronasal type-1 receptor 3-like 1 214735289 214736198 - 116885333 MODEL JAAIVD010000025 pseudo 626156735 LOC116904622 olfactory receptor 6C4-like 6 30084270 30085253 - 22301074;30032202 116904622 MODEL JAAIVD010000024;XM_032907412 XP_032763303 protein-coding 626156738 LOC116894379 60S ribosomal protein L10-like 2 156716981 156717426 + 116894379 MODEL JAAIVD010000001 pseudo 626156739 Lama1 laminin subunit alpha 1 ENCODES a protein that exhibits extracellular matrix structural constituent (ortholog); glycosphingolipid binding (ortholog); INVOLVED IN branching involved in salivary gland morphogenesis (ortholog); cell surface receptor signaling pathway (ortholog); epithelial tube branching involved in lung morphogenesis (ortholog); PARTICIPATES IN glypican signaling pathway; syndecan signaling pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); congenital merosin-deficient muscular dystrophy 1A (ortholog); fundus dystrophy (ortholog); FOUND IN basement membrane (ortholog); cell-cell junction (ortholog); extracellular matrix (ortholog) 4 177355202 177480140 + 22301074;30032202 116898592 MODEL JAAIVD010000003;XM_032899788 XP_032755679 laminin subunit alpha-1 protein-coding 626156807 Armc9 armadillo repeat containing 9 INVOLVED IN positive regulation of smoothened signaling pathway (ortholog); ASSOCIATED WITH Agenesis of Corpus Callosum (ortholog); Dandy-Walker syndrome (ortholog); genetic disease (ortholog); FOUND IN centriole (ortholog); ciliary basal body (ortholog); ciliary tip (ortholog) 4 158292248 158418729 + 22301074;30032202 116899587 MODEL JAAIVD010000003;XM_032901528 XP_032757419 lisH domain-containing protein ARMC9 protein-coding 626156836 LOC116890078 syntaxin-8-like 1 215525775 215526487 + 116890078 MODEL JAAIVD010000025 pseudo 626156837 Sirt3 sirtuin 3 ENCODES a protein that exhibits enzyme binding (ortholog); histone H3K14 deacetylase activity, NAD-dependent (ortholog); NAD-dependent protein lysine deacetylase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of reactive oxygen species metabolic process (ortholog); PARTICIPATES IN histone modification pathway; Sirtuin mediated pathway; ASSOCIATED WITH abdominal obesity-metabolic syndrome (ortholog); Alzheimer's disease (ortholog); congestive heart failure (ortholog); FOUND IN cytoplasm (ortholog); membrane (ortholog); mitochondrial inner membrane (ortholog) 2 8600225 8623682 + 22301074 116890895 MODEL JAAIVD010000001;XM_032891512;XM_032891513;XM_032891514;XM_032891515 XP_032747403;XP_032747404;XP_032747405;XP_032747406 NAD-dependent protein deacetylase sirtuin-3, mitochondrial protein-coding 626156854 Pappa pappalysin 1 ENCODES a protein that exhibits endopeptidase activity (ortholog); metalloendopeptidase activity (ortholog); metallopeptidase activity (ortholog); INVOLVED IN female pregnancy (ortholog); protein catabolic process (ortholog); response to dexamethasone (ortholog); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); arteriosclerosis (ortholog); carotid artery disease (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 1 88345955 88534416 - 22301074 116901206 MODEL JAAIVD010000025;XM_032902919 XP_032758810 pappalysin-1 protein-coding 626156878 Jchain joining chain of multimeric IgA and IgM ENCODES a protein that exhibits IgA binding (ortholog); immunoglobulin receptor binding (ortholog); peptidoglycan binding (ortholog); INVOLVED IN adaptive immune response (ortholog); glomerular filtration (ortholog); innate immune response (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN dimeric IgA immunoglobulin complex (ortholog); extracellular space (ortholog); hexameric IgM immunoglobulin complex (ortholog) 11 2020196 2027842 - 30032202 116912444 MODEL JAAIVD010000006;XM_032916512 XP_032772403 immunoglobulin J chain protein-coding 626156886 LOC116897998 60S ribosomal protein L32-like 4 60113205 60113652 - 116897998 MODEL JAAIVD010000003 pseudo 626156887 LOC116905589 nuclear cap-binding protein subunit 2-like 7 4521055 4529061 + 116905589 MODEL JAAIVD010000026 pseudo 626156888 C11H4orf50 chromosome 11 C4orf50 homolog 11 67964672 68000631 - 116912017 MODEL JAAIVD010000006;XM_032915906 XP_032771797 uncharacterized protein C4orf50 homolog protein-coding 626156902 Abca5 ATP binding cassette subfamily A member 5 INVOLVED IN cholesterol efflux (ortholog); cholesterol homeostasis (ortholog); cholesterol metabolic process (ortholog); PARTICIPATES IN transport pathway; ASSOCIATED WITH Colorectal Neoplasms (ortholog); Generalized Hypertrichosis Terminalis, with or without Gingival Hyperplasia (ortholog); genetic disease (ortholog); FOUND IN late endosome (ortholog); lysosome (ortholog) 9 78970676 79033443 + 22301074;30032202 116908909 MODEL JAAIVD010000002;XM_032912363 XP_032768254 ATP-binding cassette sub-family A member 5 protein-coding 626156944 Etv2 ETS variant transcription factor 2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN blastocyst development (ortholog); blood vessel morphogenesis (ortholog); BMP signaling pathway (ortholog); ASSOCIATED WITH Aortic Remodeling (ortholog); limb ischemia (ortholog); polydactyly (ortholog) 2 165370575 165372768 + 22301074;30032202 116894456 MODEL JAAIVD010000001;XM_032896164;XM_032896165 XP_032752055;XP_032752056 ETS translocation variant 2 protein-coding 626156956 LOC116895906 60S ribosome subunit biogenesis protein NIP7 homolog 3 120600214 120601723 + 116895906 MODEL JAAIVD010000012 pseudo 626156957 Fkbp11 FKBP prolyl isomerase 11 ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog) 1 271545568 271549211 - 22301074;30032202 116884814 MODEL JAAIVD010000025;XM_032886047;XM_032886053;XM_032886061 XP_032741938;XP_032741944;XP_032741952 peptidyl-prolyl cis-trans isomerase FKBP11 protein-coding 626156973 LOC116903091 uncharacterized LOC116903091 6 4284975 4285489 + 116903091 MODEL JAAIVD010000024;XR_004388249 ncrna 626156977 Pde7b phosphodiesterase 7B ENCODES a protein that exhibits 3',5'-cyclic-AMP phosphodiesterase activity (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH prostate cancer (ortholog) 2 215870960 216183235 + 30032202 116892972 MODEL JAAIVD010000001;XM_032894930 XP_032750821 cAMP-specific 3',5'-cyclic phosphodiesterase 7B protein-coding 626156994 Tyms thymidylate synthetase ENCODES a protein that exhibits folic acid binding (ortholog); heterocyclic compound binding (ortholog); mRNA binding (ortholog); INVOLVED IN cartilage development (ortholog); circadian rhythm (ortholog); developmental growth (ortholog); PARTICIPATES IN beta-ureidopropionase deficiency pathway; capecitabine pharmacodynamics pathway; capecitabine pharmacokinetics pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute myeloid leukemia (ortholog); FOUND IN cytoplasm (ortholog); mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog) 4 182426563 182443506 + 22301074;30032202 116899729 MODEL JAAIVD010000003;XM_032901769 XP_032757660 thymidylate synthase protein-coding 626157005 Psmc1 proteasome 26S subunit, ATPase 1 ENCODES a protein that exhibits TBP-class protein binding (ortholog); ASSOCIATED WITH neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss (ortholog); prostate cancer (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); proteasome accessory complex (ortholog) 6 37441646 37442896 + 22301074;30032202 116904261 MODEL JAAIVD010000024;XM_032907211 XP_032763102 26S proteasome regulatory subunit 4 protein-coding 626157008 Ccnl1 cyclin L1 INVOLVED IN regulation of RNA splicing (ortholog); FOUND IN cyclin-dependent protein kinase holoenzyme complex (ortholog); nuclear speck (ortholog); nucleus (ortholog) 3 89759377 89772405 + 30032202 116896811 MODEL JAAIVD010000012;XM_032898285;XM_032898286;XM_032898287;XR_004387371;XR_004387372 XP_032754176;XP_032754177;XP_032754178 cyclin-L1 protein-coding 626157037 LOC116896043 caspase-6-like 3 196139090 196139753 - 116896043 MODEL JAAIVD010000012 pseudo 626157038 Serpinf1 serpin family F member 1 INVOLVED IN cellular response to cobalt ion (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to glucose stimulus (ortholog); ASSOCIATED WITH Acute Experimental Pancreatitis (ortholog); adenoid cystic carcinoma (ortholog); Albuminuria (ortholog); FOUND IN axon (ortholog); axon hillock (ortholog); basement membrane (ortholog) 9 94120300 94132691 - 22301074;30032202 116909992 MODEL JAAIVD010000002;XM_032913775 XP_032769666 pigment epithelium-derived factor protein-coding 626157050 Nr1h3 nuclear receptor subfamily 1 group H member 3 ENCODES a protein that exhibits chromatin DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN apoptotic cell clearance (ortholog); bile acid metabolic process (ortholog); cellular response to lipopolysaccharide (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); atherosclerosis (ortholog); Carotid Atherosclerosis (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); cytosol (ortholog) 5 65350155 65360751 - 22301074;30032202 116901612 MODEL JAAIVD010000023;XM_032903649;XM_032903650;XM_032903652;XM_032903653;XM_032903654;XM_032903655;XM_032903656 XP_032759540;XP_032759541;XP_032759543;XP_032759544;XP_032759545;XP_032759546;XP_032759547 oxysterols receptor LXR-alpha protein-coding 626157076 LOC116887545 40S ribosomal protein S25-like 18 6896048 6896684 + 116887545 MODEL JAAIVD010000013 pseudo 626157077 Thap5 THAP domain containing 5 ENCODES a protein that exhibits protease binding (ortholog); INVOLVED IN negative regulation of cell cycle (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 45356723 45357746 + 30032202 116909051 MODEL JAAIVD010000002;XM_032912531 XP_032768422 THAP domain-containing protein 5 protein-coding 626157082 Slc35g2 solute carrier family 35 member G2 ASSOCIATED WITH melanoma (ortholog); FOUND IN Golgi apparatus (ortholog); plasma membrane (ortholog); synaptic vesicle membrane (ortholog) 8 91860990 91885321 - 30032202 116907668 MODEL JAAIVD010000027;XM_032910762 XP_032766653 protein-coding 626157088 LOC116887947 transmembrane emp24 domain-containing protein 2-like X 62716078 62716637 + 116887947 MODEL JAAIVD010000014 pseudo 626157089 Rxylt1 ribitol xylosyltransferase 1 ENCODES a protein that exhibits ribitol beta-1,4-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via mannose (ortholog); ASSOCIATED WITH congenital muscular dystrophy-dystroglycanopathy type A10 (ortholog); genetic disease (ortholog); Walker-Warburg syndrome (ortholog); FOUND IN Golgi apparatus (ortholog); nucleoplasm (ortholog) 1 200550793 200561223 - 30032202 116909574 MODEL JAAIVD010000025;XM_032913198;XM_032913205;XM_032913213 XP_032769089;XP_032769096;XP_032769104 ribitol-5-phosphate xylosyltransferase 1 protein-coding 626157106 LOC116906064 prohibitin-2-like 7 53186544 53256726 - 116906064 MODEL JAAIVD010000026 pseudo 626157107 LOC116888365 wiskott-Aldrich syndrome protein family member 1-like X 6808961 6811703 + 22301074 116888365 MODEL JAAIVD010000014;XM_032889632 XP_032745523 protein-coding 626157113 LOC116893395 CD177 antigen-like 2 170029988 170035235 + 30032202 116893395 MODEL JAAIVD010000001;XM_032895186 XP_032751077 protein-coding 626157123 Champ1 chromosome alignment maintaining phosphoprotein 1 INVOLVED IN attachment of mitotic spindle microtubules to kinetochore (ortholog); protein localization to kinetochore (ortholog); protein localization to microtubule (ortholog); ASSOCIATED WITH autosomal dominant intellectual developmental disorder 40 (ortholog); developmental and epileptic encephalopathy 11 (ortholog); genetic disease (ortholog); FOUND IN condensed chromosome (ortholog); kinetochore (ortholog); nuclear body (ortholog) 13 69900606 69915327 - 30032202 116914574 MODEL JAAIVD010000008;XM_032918932;XM_032918933 XP_032774823;XP_032774824 chromosome alignment-maintaining phosphoprotein 1 protein-coding 626157131 LOC116895011 U1 spliceosomal RNA 2 91457420 91457564 - 116895011 MODEL JAAIVD010000001 pseudo 626157132 Cndp1 carnosine dipeptidase 1 ENCODES a protein that exhibits dipeptidase activity (ortholog); INVOLVED IN proteolysis (ortholog); regulation of protein metabolic process (ortholog); PARTICIPATES IN beta-alanine metabolic pathway; carnosinemia pathway; GABA aminotransferase deficiency pathway; ASSOCIATED WITH Diabetic Nephropathies (ortholog); Experimental Liver Cirrhosis (ortholog); glomerulonephritis (ortholog); FOUND IN cytosol (ortholog) 15 47723498 47757276 + 22301074;30032202 116884832 MODEL JAAIVD010000010;XM_032886070 XP_032741961 beta-Ala-His dipeptidase protein-coding 626157148 LOC116909878 heterogeneous nuclear ribonucleoprotein A3-like 9 31467622 31468793 + 116909878 MODEL JAAIVD010000002 pseudo 626157149 Acsm2b acyl-CoA synthetase medium chain family member 2B ENCODES a protein that exhibits benzoate-CoA ligase activity (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; FOUND IN mitochondrion (ortholog) 2 82068104 82105743 - 30032202 116893923 MODEL JAAIVD010000001;XM_032895643 XP_032751534 acyl-coenzyme A synthetase ACSM2B, mitochondrial protein-coding 626157167 LOC116910488 protein transport protein Sec61 subunit gamma 9 73888450 73888847 + 22301074;30032202 116910488 MODEL JAAIVD010000002;XM_032914375 XP_032770266 protein-coding 626157172 LOC116910856 olfactory receptor 10Z1 10 52943713 52944654 - 22301074 116910856 MODEL JAAIVD010000005;XM_032914615 XP_032770506 protein-coding 626157175 Havcr2 hepatitis A virus cellular receptor 2 ENCODES a protein that exhibits transmembrane signaling receptor activity (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); defense response to Gram-positive bacterium (ortholog); macrophage activation involved in immune response (ortholog); ASSOCIATED WITH asthma (ortholog); cystic fibrosis (ortholog); Eczema (ortholog); FOUND IN cell surface (ortholog); early endosome (ortholog); immunological synapse (ortholog) 9 29161974 29188424 + 116910221 MODEL JAAIVD010000002;XM_032914109 XP_032770000 protein-coding 626157185 LOC116914411 cyclin-dependent kinases regulatory subunit 2-like 13 3922585 3922814 - 116914411 MODEL JAAIVD010000008 pseudo 626157186 Kpna2 karyopherin subunit alpha 2 ENCODES a protein that exhibits DNA-binding transcription factor binding (ortholog); histone deacetylase binding (ortholog); nuclear import signal receptor activity (ortholog); INVOLVED IN entry of viral genome into host nucleus through nuclear pore complex via importin (ortholog); NLS-bearing protein import into nucleus (ortholog); non-canonical NF-kappaB signal transduction (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 9 72134399 72148166 + 22301074;30032202 116909377 MODEL JAAIVD010000002;XM_032912930;XM_032912931 XP_032768821;XP_032768822 importin subunit alpha-1 protein-coding 626157205 LOC116904367 kelch repeat and BTB domain-containing protein 2-like 6 84230699 84250722 + 116904367 MODEL JAAIVD010000024 pseudo 626157206 Tmem273 transmembrane protein 273 13 8519995 8536174 + 116914933 MODEL JAAIVD010000008;XM_032919358 XP_032775249 protein-coding 626157215 LOC116914595 cytochrome c, somatic-like 13 15584967 15585415 + 22301074;30032202 116914595 MODEL JAAIVD010000008;XM_032918956 XP_032774847 protein-coding 626157220 Mms19 MMS19 homolog, cytosolic iron-sulfur assembly component ENCODES a protein that exhibits enzyme binding (ortholog); nuclear estrogen receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN protein maturation (ortholog); PARTICIPATES IN cytosolic iron-sulfur cluster protein assembly pathway; FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic [4Fe-4S] assembly targeting complex (ortholog) 2 41058382 41095330 - 30032202 116891169 MODEL JAAIVD010000001;XM_032891978;XM_032891979;XM_032891980 XP_032747869;XP_032747870;XP_032747871 MMS19 nucleotide excision repair protein homolog protein-coding 626157261 Ccdc82 coiled-coil domain containing 82 ASSOCIATED WITH intellectual disability (ortholog); syndromic intellectual disability (ortholog) 8 9219367 9256847 + 30032202 116906783 MODEL JAAIVD010000027;XM_032909636;XM_032909637 XP_032765527;XP_032765528 coiled-coil domain-containing protein 82 protein-coding 626157278 LOC116890771 uncharacterized LOC116890771 2 3210631 3226139 - 116890771 MODEL JAAIVD010000001;XR_004386785 ncrna 626157283 LOC116908525 uncharacterized LOC116908525 9 11953643 11956209 + 116908525 MODEL JAAIVD010000002;XR_004388992 ncrna 626157288 Dcst2 DC-STAMP domain containing 2 INVOLVED IN fusion of sperm to egg plasma membrane involved in single fertilization (ortholog); sperm-egg recognition (ortholog) 3 64293413 64302358 - 22301074 116895799 MODEL JAAIVD010000012;XM_032896939 XP_032752830 DC-STAMP domain-containing protein 2 protein-coding 626157304 LOC116893134 glyceraldehyde-3-phosphate dehydrogenase-like 2 84299177 84300125 + 116893134 MODEL JAAIVD010000001 pseudo 626157305 Chd3 chromodomain helicase DNA binding protein 3 ENCODES a protein that exhibits ATP hydrolysis activity (ortholog); ATP-dependent chromatin remodeler activity (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN centrosome cycle (ortholog); chromatin organization (ortholog); chromatin remodeling (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); basal cell carcinoma (ortholog); Developmental Disabilities (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); cytoplasm (ortholog) 9 48953044 48979770 - 22301074;30032202 116908560 MODEL JAAIVD010000002;XM_032911765 XP_032767656 chromodomain-helicase-DNA-binding protein 3 protein-coding 626157349 Atat1 alpha tubulin acetyltransferase 1 ENCODES a protein that exhibits acetyltransferase activity (ortholog); L-lysine N-acetyltransferase activity, acting on acetyl phosphate as donor (ortholog); tubulin N-acetyltransferase activity (ortholog); INVOLVED IN alpha-tubulin acetylation (ortholog); dentate gyrus development (ortholog); microtubule cytoskeleton organization (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); High Myopia (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); membrane (ortholog) 18 9106587 9119698 - 22301074;30032202 116887473 MODEL JAAIVD010000013;XM_032889085;XM_032889086;XM_032889087;XM_032889088;XM_032889089 XP_032744976;XP_032744977;XP_032744978;XP_032744979;XP_032744980 alpha-tubulin N-acetyltransferase 1 protein-coding 626157374 LOC116911776 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-5-like 10 33484462 33484668 - 22301074;30032202 116911776 MODEL JAAIVD010000005;XM_032915767 XP_032771658 protein-coding 626157377 LOC116894192 olfactory receptor 478-like 2 106135348 106136292 + 22301074;30032202 116894192 MODEL JAAIVD010000001;XM_032895906 XP_032751797 protein-coding 626157380 LOC116907043 cytochrome c oxidase subunit 7A2, mitochondrial FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 8 74028167 74032390 - 22301074;30032202 116907043 MODEL JAAIVD010000027;XM_032909997 XP_032765888 protein-coding 626157388 Hsp90b1 heat shock protein 90 beta family member 1 ENCODES a protein that exhibits ATP-dependent protein folding chaperone (ortholog); low-density lipoprotein particle receptor binding (ortholog); protein folding chaperone (ortholog); INVOLVED IN actin rod assembly (ortholog); cellular response to ATP (ortholog); cellular response to manganese ion (ortholog); PARTICIPATES IN codeine and morphine pharmacodynamics pathway; codeine and morphine pharmacokinetics pathway; etoposide pharmacodynamics pathway; ASSOCIATED WITH Diabetic Cardiomyopathies (ortholog); lung adenocarcinoma (ortholog); male infertility due to globozoospermia (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum chaperone complex (ortholog) 1 165817247 165831550 - 22301074;30032202 116907672 MODEL JAAIVD010000025;XM_032910770 XP_032766661 endoplasmin protein-coding 626157410 LOC116902600 small nucleolar RNA SNORA17 5 104622145 104622275 + 116902600 MODEL JAAIVD010000023;XR_004388189 snorna 626157413 LOC116896735 uncharacterized LOC116896735 3 68893413 68904935 - 116896735 MODEL JAAIVD010000012;XR_004387365 ncrna 626157417 LOC116905220 histone H3.3A-like 7 94604061 94604464 + 116905220 MODEL JAAIVD010000026 pseudo 626157418 Sln sarcolipin INVOLVED IN negative regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); positive regulation of cold-induced thermogenesis (ortholog); regulation of ATPase-coupled calcium transmembrane transporter activity (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); sarcoplasmic reticulum (ortholog); sarcoplasmic reticulum membrane (ortholog) 8 47839656 47840259 + 22301074 116907084 MODEL JAAIVD010000027;XM_032910040 XP_032765931 protein-coding 626157423 Dph6 diphthamine biosynthesis 6 ENCODES a protein that exhibits diphthine-ammonia ligase activity (ortholog) 5 92731581 92858075 - 30032202 116901763 MODEL JAAIVD010000023;XM_032903900 XP_032759791 diphthine--ammonia ligase protein-coding 626157436 Ppp1ca protein phosphatase 1 catalytic subunit alpha ENCODES a protein that exhibits cadherin binding involved in cell-cell adhesion (ortholog); iron ion binding (ortholog); phosphatase activity (ortholog); INVOLVED IN branching morphogenesis of an epithelial tube (ortholog); circadian regulation of gene expression (ortholog); dephosphorylation (ortholog); PARTICIPATES IN adenosine monophosphate-activated protein kinase (AMPK) signaling pathway; Bone morphogenetic proteins signaling pathway; dopamine signaling pathway; ASSOCIATED WITH congestive heart failure (ortholog); dilated cardiomyopathy (ortholog); FOUND IN adherens junction (ortholog); chromosome, telomeric region (ortholog); cytoplasm (ortholog) 2 3448599 3452068 - 30032202 116890779 MODEL JAAIVD010000001;XM_032891246 XP_032747137 serine/threonine-protein phosphatase PP1-alpha catalytic subunit protein-coding 626157447 Zfyve1 zinc finger FYVE-type containing 1 ENCODES a protein that exhibits 1-phosphatidylinositol binding (ortholog); phosphatidylinositol-3,4,5-trisphosphate binding (ortholog); phosphatidylinositol-3,4-bisphosphate binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); host-mediated activation of viral genome replication (ortholog); lipid droplet formation (ortholog); FOUND IN autophagosome (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 7 97645074 97695394 - 22301074 116905247 MODEL JAAIVD010000026;XM_032908090;XM_032908091 XP_032763981;XP_032763982 zinc finger FYVE domain-containing protein 1 protein-coding 626157465 Znf394 zinc finger protein 394 16 8095336 8101947 + 30032202 116885865 MODEL JAAIVD010000004;XM_032887191 XP_032743082 protein-coding 626157471 LOC116899502 ribosomal biogenesis factor-like 4 147896634 147896931 - 116899502 MODEL JAAIVD010000003 pseudo 626157472 LOC116909931 bolA-like protein 2 9 96420545 96420868 - 30032202 116909931 MODEL JAAIVD010000002;XM_032913700 XP_032769591 protein-coding 626157476 LOC116892957 calmodulin-like 2 211718867 211719579 - 116892957 MODEL JAAIVD010000001;XR_004386987 pseudo 626157479 LOC116900203 40S ribosomal protein S26-like 5 51977573 51977942 + 116900203 MODEL JAAIVD010000023 pseudo 626157480 Grk5 G protein-coupled receptor kinase 5 ENCODES a protein that exhibits beta-adrenergic receptor kinase activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN desensitization of G protein-coupled receptor signaling pathway (ortholog); fat cell differentiation (ortholog); negative regulation of adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptor; angiotensin II signaling pathway via AT1 receptor; dopamine signaling pathway via D1 family of receptors; ASSOCIATED WITH Alzheimer's disease (ortholog); cardiovascular system disease (ortholog); Cocaine-Related Disorders (ortholog); FOUND IN cytosol (ortholog); nuclear membrane (ortholog); nuclear speck (ortholog) 2 55067222 55266753 - 22301074;30032202 116891301 MODEL JAAIVD010000001;XM_032892210;XM_032892211 XP_032748101;XP_032748102 protein-coding 626157504 Th tyrosine hydroxylase ENCODES a protein that exhibits amino acid binding (ortholog); dopamine binding (ortholog); enzyme binding (ortholog); INVOLVED IN aminergic neurotransmitter loading into synaptic vesicle (ortholog); animal organ morphogenesis (ortholog); catecholamine biosynthetic process (ortholog); PARTICIPATES IN aromatic L-amino acid decarboxylase deficiency pathway; catecholamine biosynthetic pathway; dopamine biosynthetic pathway; ASSOCIATED WITH brain disease (ortholog); Brain Injuries (ortholog); brain ischemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic side of plasma membrane (ortholog) 11 42498594 42505727 - 22301074;30032202 116912235 MODEL JAAIVD010000006;XM_032916211 XP_032772102 tyrosine 3-monooxygenase protein-coding 626157521 Sel1l2 SEL1L2 adaptor subunit of SYVN1 ubiquitin ligase FOUND IN cilium (ortholog); nuclear speck (ortholog) 5 119539050 119661492 - 22301074;30032202 116900656 MODEL JAAIVD010000023;XM_032902362 XP_032758253 SEL1L2 adaptor subunit of ERAD E3 ligase;SEL1L2 adaptor subunit of ERAD E3 ubiquitin ligase;protein sel-1 homolog 2 protein-coding 626157545 Myo3b myosin IIIB ENCODES a protein that exhibits microfilament motor activity (ortholog); protein serine/threonine kinase activity (ortholog); INVOLVED IN auditory receptor cell stereocilium organization (ortholog); cochlea morphogenesis (ortholog); positive regulation of filopodium assembly (ortholog); FOUND IN filopodium tip (ortholog); photoreceptor inner segment (ortholog); photoreceptor outer segment (ortholog) 5 47397652 47745863 + 22301074 116900189 MODEL JAAIVD010000023;XM_032901950 XP_032757841 myosin-IIIb protein-coding 626157582 Nupr2 nuclear protein 2, transcriptional regulator INVOLVED IN cellular response to starvation (ortholog); DNA damage response (ortholog); negative regulation of cell population proliferation (ortholog); FOUND IN nucleus (ortholog) 16 24110749 24113614 - 30032202 116885642 MODEL JAAIVD010000004;XM_032886951;XR_004386029 XP_032742842 nuclear protein 2 protein-coding 626157591 Pja1 praja ring finger ubiquitin ligase 1 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN protein catabolic process (ortholog); ASSOCIATED WITH craniofrontonasal syndrome (ortholog); FOUND IN cytoplasm (ortholog) X 57457557 57462521 - 116888584 MODEL JAAIVD010000014;XM_032889884;XM_032889885;XM_032889887 XP_032745775;XP_032745776;XP_032745778 E3 ubiquitin-protein ligase Praja-1 protein-coding 626157603 Exo1 exonuclease 1 ENCODES a protein that exhibits 5'-3' DNA exonuclease activity (ortholog); chromatin binding (ortholog); DNA binding (ortholog); INVOLVED IN DNA recombination (ortholog); DNA strand resection involved in replication fork processing (ortholog); humoral immune response mediated by circulating immunoglobulin (ortholog); PARTICIPATES IN homologous recombination pathway of double-strand break repair; mismatch repair pathway; ASSOCIATED WITH Breast Neoplasms (ortholog); Colorectal Neoplasms (ortholog); COVID-19 (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 10 54392262 54415618 + 22301074;30032202 116911676 MODEL JAAIVD010000005;XM_032915631 XP_032771522 protein-coding 626157622 LOC116911377 quinone oxidoreductase-like protein 2 10 36800675 36841223 + 22301074;30032202 116911377 MODEL JAAIVD010000005;XM_032915318;XM_032915319 XP_032771209;XP_032771210 protein-coding 626157639 LOC116905452 E3 ubiquitin-protein ligase RNF34-like 7 126298717 126302628 + 116905452 MODEL JAAIVD010000026 pseudo 626157640 LOC116914610 low-density lipoprotein receptor-related protein 1-like 13 51257910 51306811 - 22301074 116914610 MODEL JAAIVD010000008;XM_032918973 XP_032774864 protein-coding 626157677 LOC116904872 60S ribosomal protein L30-like 1 145525450 145525795 + 116904872 MODEL JAAIVD010000025 pseudo 626157678 LOC116898492 structural maintenance of chromosomes protein 6-like 4 122254324 122255463 + 116898492 MODEL JAAIVD010000003 pseudo 626157679 LOC116886600 RNA-binding protein FUS-like 17 9929078 9930525 + 116886600 MODEL JAAIVD010000011 pseudo 626157680 Rfx6 regulatory factor X6 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); transcription cis-regulatory region binding (ortholog); INVOLVED IN endocrine pancreas development (ortholog); glucose homeostasis (ortholog); pancreatic A cell differentiation (ortholog); ASSOCIATED WITH diabetes mellitus (ortholog); epilepsy (ortholog); genetic disease (ortholog); FOUND IN nucleus (ortholog) 18 29165120 29219208 - 30032202 116887168 MODEL JAAIVD010000013;XM_032888719 XP_032744610 DNA-binding protein RFX6 protein-coding 626157702 LOC116910937 RNA-binding protein 12B-B-like 10 74369456 74370037 + 116910937 MODEL JAAIVD010000005 pseudo 626157703 Setx senataxin ENCODES a protein that exhibits identical protein binding (ortholog); transcription termination site sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to hydrogen peroxide (ortholog); cellular response to oxidative stress (ortholog); circadian rhythm (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); amyotrophic lateral sclerosis type 4 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); growth cone (ortholog) 5 7523963 7573552 - 22301074;30032202 116901220 MODEL JAAIVD010000023;XM_032902944;XM_032902945 XP_032758835;XP_032758836 probable helicase senataxin protein-coding 626157736 Slc22a7 solute carrier family 22 member 7 ENCODES a protein that exhibits alpha-ketoglutarate transmembrane transporter activity (ortholog); organic anion transmembrane transporter activity (ortholog); prostaglandin transmembrane transporter activity (ortholog); INVOLVED IN alpha-ketoglutarate transport (ortholog); organic anion transport (ortholog); prostaglandin transport (ortholog); PARTICIPATES IN multispecific organic anion transporter mediated transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 4 83426929 83433392 + 22301074 116898047 MODEL JAAIVD010000003;XM_032899440;XM_032899441 XP_032755331;XP_032755332 protein-coding 626157754 LOC116890091 glyceraldehyde-3-phosphate dehydrogenase-like 1 228926146 228927161 + 116890091 MODEL JAAIVD010000025 pseudo 626157755 Dcaf4 DDB1 and CUL4 associated factor 4 FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog) 7 97626552 97641228 + 22301074;30032202 116905249 MODEL JAAIVD010000026;XM_032908092;XM_032908093;XM_032908094 XP_032763983;XP_032763984;XP_032763985 DDB1- and CUL4-associated factor 4 protein-coding 626157778 LOC116898237 RING finger protein 223-like 4 151430647 151433891 - 30032202 116898237 MODEL JAAIVD010000003;XM_032899589 XP_032755480 protein-coding 626157784 Cldnd1 claudin domain containing 1 FOUND IN apical plasma membrane (ortholog) 4 42695366 42701749 + 22301074 116898916 MODEL JAAIVD010000003;XM_032900325;XM_032900326;XM_032900327 XP_032756216;XP_032756217;XP_032756218 claudin domain-containing protein 1 protein-coding 626157801 Stac2 SH3 and cysteine rich domain 2 INVOLVED IN positive regulation of protein localization to plasma membrane (ortholog); positive regulation of voltage-gated calcium channel activity (ortholog); ASSOCIATED WITH Childhood Schizophrenia (ortholog); High Myopia (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog) 9 56332498 56347407 + 22301074;30032202 116909944 MODEL JAAIVD010000002;XM_032913718 XP_032769609 SH3 and cysteine-rich domain-containing protein 2 protein-coding 626157816 Dlg2 discs large MAGUK scaffold protein 2 ENCODES a protein that exhibits kinase binding (ortholog); PDZ domain binding (ortholog); protein phosphatase binding (ortholog); INVOLVED IN anterograde axonal protein transport (ortholog); cellular response to potassium ion (ortholog); chemical synaptic transmission (ortholog); ASSOCIATED WITH melanoma (ortholog); schizophrenia (ortholog); FOUND IN axon initial segment (ortholog); cell junction (ortholog); cytoplasm (ortholog) 2 108743808 110565274 - 22301074;30032202 116893588 MODEL JAAIVD010000001;XM_032895287 XP_032751178 disks large homolog 2 protein-coding 626157848 LOC116903193 killer cell lectin-like receptor subfamily B member 1 6 18455328 18474814 + 116903193 MODEL JAAIVD010000024;XM_032905569 XP_032761460 protein-coding 626157857 Rac1 Rac family small GTPase 1 ENCODES a protein that exhibits ATPase binding (ortholog); enzyme binding (ortholog); G protein activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); actin filament organization (ortholog); actin filament polymerization (ortholog); PARTICIPATES IN Arf family mediated signaling pathway; azathioprine pharmacodynamics pathway; c-Jun N-terminal kinases MAPK signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 48 (ortholog); breast cancer (ortholog); Cardiomegaly (ortholog); FOUND IN actin filament (ortholog); cell cortex (ortholog); cell projection (ortholog) 16 9622793 9644543 + 22301074;30032202 116885179 MODEL JAAIVD010000004;XM_032886393 XP_032742284 ras-related C3 botulinum toxin substrate 1 protein-coding 626157867 Rnf168 ring finger protein 168 ENCODES a protein that exhibits chromatin binding (ortholog); histone binding (ortholog); histone H2AK15 ubiquitin ligase activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage checkpoint signaling (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); lung non-small cell carcinoma (ortholog); FOUND IN cytosol (ortholog); DNA repair complex (ortholog); nucleoplasm (ortholog) 4 17096744 17115927 + 22301074;30032202 116898771 MODEL JAAIVD010000003;XM_032900107 XP_032755998 E3 ubiquitin-protein ligase RNF168 protein-coding 626157877 Colgalt2 collagen beta(1-O)galactosyltransferase 2 ASSOCIATED WITH COVID-19 (ortholog) 10 31862604 31965095 + 30032202 116911436 MODEL JAAIVD010000005;XM_032915405 XP_032771296 procollagen galactosyltransferase 2 protein-coding 626157892 Dll3 delta like canonical Notch ligand 3 ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN compartment pattern specification (ortholog); negative regulation of astrocyte differentiation (ortholog); negative regulation of neurogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; ASSOCIATED WITH Congenital Abnormalities (ortholog); Craniofacial Abnormalities (ortholog); dysostosis (ortholog); FOUND IN plasma membrane (ortholog) 2 167715019 167723396 + 22301074;30032202 116894471 MODEL JAAIVD010000001;XM_032896181;XM_032896182 XP_032752072;XP_032752073 delta-like protein 3 protein-coding 626157911 LOC116884593 uncharacterized LOC116884593 15 30298903 30306020 - 116884593 MODEL JAAIVD010000010;XR_004385885 ncrna 626157916 Fcrl6 Fc receptor like 6 ENCODES a protein that exhibits MHC class II protein binding (ortholog); phosphatase binding (ortholog); protein phosphatase binding (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN external side of plasma membrane (ortholog); plasma membrane (ortholog) 10 51713489 51722472 - 30032202 116911607 MODEL JAAIVD010000005;X56448;XM_032915582 CAA39831;XP_032771473 gp42 Fc receptor-like protein 6 protein-coding 626157926 Btnl9 butyrophilin like 9 9 31848924 31863236 - 30032202 116909993 MODEL JAAIVD010000002;XM_032913776 XP_032769667 butyrophilin-like protein 9 protein-coding 626157937 LOC116911249 cadherin-7-like 10 88532618 88560720 + 22301074;30032202 116911249 MODEL JAAIVD010000005;XM_032915149 XP_032771040 protein-coding 626157945 LOC116906613 uncharacterized LOC116906613 8 8337064 8338079 + 116906613 MODEL JAAIVD010000027;XR_004388756 ncrna 626157949 LOC116887563 lysine--tRNA ligase-like 18 28657878 28659856 + 116887563 MODEL JAAIVD010000013 pseudo 626157950 Atp5if1 ATP synthase inhibitory factor subunit 1 ENCODES a protein that exhibits angiostatin binding (ortholog); ATPase binding (ortholog); ATPase inhibitor activity (ortholog); INVOLVED IN erythrocyte differentiation (ortholog); heme biosynthetic process (ortholog); mitochondrial depolarization (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); carcinoma (ortholog); Experimental Mammary Neoplasms (ortholog); FOUND IN cell surface (ortholog); mitochondrion (ortholog) 1 25704161 25708380 + 22301074 116895466 MODEL JAAIVD010000025;XM_032896732 XP_032752623 ATPase inhibitor, mitochondrial protein-coding 626157957 LOC116907221 nucleophosmin-like 8 8421185 8435720 - 116907221 MODEL JAAIVD010000027 pseudo 626157958 Hmgcl 3-hydroxy-3-methylglutaryl-CoA lyase ENCODES a protein that exhibits carboxylic acid binding (ortholog); fatty-acyl-CoA binding (ortholog); hydroxymethylglutaryl-CoA lyase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); ketone body biosynthetic process (ortholog); lipid metabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH 3-hydroxy-3-methylglutaryl-CoA lyase deficiency (ortholog); amino acid metabolic disorder (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog); peroxisome (ortholog); protein-containing complex (ortholog) 1 22268169 22284109 - 22301074;30032202 116894490 MODEL JAAIVD010000025;XM_032896203 XP_032752094 hydroxymethylglutaryl-CoA lyase, mitochondrial protein-coding 626157971 LOC116884905 40S ribosomal protein S2-like 15 6162330 6166058 + 116884905 MODEL JAAIVD010000010 pseudo 626157972 Msc musculin ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN branchiomeric skeletal muscle development (ortholog); cellular response to leukemia inhibitory factor (ortholog); diaphragm development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); end stage renal disease (ortholog); Experimental Colitis (ortholog); FOUND IN nucleoplasm (ortholog); nucleus (ortholog) 1 149234725 149236447 - 22301074;30032202 116889762 MODEL JAAIVD010000025;XM_032890625 XP_032746516 protein-coding 626157977 LOC116912798 40S ribosomal protein S17-like 11 10143568 10143966 + 116912798 MODEL JAAIVD010000006 pseudo 626157978 Pradc1 protease associated domain containing 1 FOUND IN extracellular region (ortholog) 6 60750364 60755466 + 116903574 MODEL JAAIVD010000024;XM_032906192;XM_032906194;XM_032906195;XR_004388287 XP_032762083;XP_032762085;XP_032762086 protease-associated domain-containing protein 1 protein-coding 626157996 Snrnp70 small nuclear ribonucleoprotein U1 subunit 70 ENCODES a protein that exhibits RNA binding (ortholog); U1 snRNA binding (ortholog); U1 snRNP binding (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); cellular response to transforming growth factor beta stimulus (ortholog); cellular response to tumor necrosis factor (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Developmental Disabilities (ortholog); disease of mental health (ortholog); FOUND IN lysosomal lumen (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 2 154113349 154133071 + 22301074;30032202 116892155 MODEL JAAIVD010000001;XM_032893649;XM_032893650 XP_032749540;XP_032749541 U1 small nuclear ribonucleoprotein 70 kDa protein-coding 626158013 LOC116914346 ATP synthase mitochondrial F1 complex assembly factor 2-like 13 53927147 53928536 - 116914346 MODEL JAAIVD010000008 pseudo 626158014 B4galt6 beta-1,4-galactosyltransferase 6 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity (ortholog); INVOLVED IN central nervous system myelination (ortholog); central nervous system neuron axonogenesis (ortholog); glycosphingolipid biosynthetic process (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Experimental Autoimmune Encephalomyelitis (ortholog); multiple sclerosis (ortholog) 15 22928496 22987922 + 22301074;30032202 116885020 MODEL JAAIVD010000010;XM_032886262 XP_032742153 protein-coding 626158027 Pak1ip1 PAK1 interacting protein 1 INVOLVED IN cell population proliferation (ortholog); regulation of signal transduction by p53 class mediator (ortholog); ribosomal large subunit biogenesis (ortholog); FOUND IN nucleolus (ortholog) 14 59999908 60011503 + 22301074 116883613 MODEL JAAIVD010000009;XM_032884803 XP_032740694 p21-activated protein kinase-interacting protein 1 protein-coding 626158041 LOC116897320 uncharacterized LOC116897320 3 211229954 211248346 - 116897320 MODEL JAAIVD010000012;XR_004387413 ncrna 626158049 LOC116893457 U1 small nuclear ribonucleoprotein C-like 2 178555988 178556532 - 116893457 MODEL JAAIVD010000001 pseudo 626158050 Myef2 myelin expression factor 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN myotube differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); neuron differentiation (ortholog); FOUND IN nucleus (ortholog) 5 103398272 103442878 - 30032202 116901899 MODEL JAAIVD010000023;XM_032904109;XM_032904110;XM_032904111;XM_032904112;XM_032904113 XP_032760000;XP_032760001;XP_032760002;XP_032760003;XP_032760004 protein-coding 626158081 Tmem74b transmembrane protein 74B 5 131081557 131084112 + 116902109 MODEL JAAIVD010000023;XM_032904419 XP_032760310 protein-coding 626158086 Trnaw-cca transfer RNA tryptophan (anticodon CCA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 116889726 MODEL JAAIVD010000061 trna 626158087 LOC116909719 uncharacterized LOC116909719 9 76251784 76268776 + 116909719 MODEL JAAIVD010000002;XR_004389093 ncrna 626158091 LOC116914342 60S ribosomal protein L4-like 13 52437473 52438740 + 116914342 MODEL JAAIVD010000008;XR_004389743 pseudo 626158094 Krt84 keratin 84 ENCODES a protein that exhibits structural constituent of skin epidermis (ortholog); INVOLVED IN regulation of keratinocyte differentiation (ortholog); FOUND IN intermediate filament cytoskeleton (ortholog); keratin filament (ortholog) 1 261538590 261546291 + 22301074;30032202 116883731 MODEL JAAIVD010000025;XM_032884966 XP_032740857 keratin, type II cuticular Hb4 protein-coding 626158107 LOC116887767 U7 small nuclear RNA 18 24085047 24085109 + 116887767 MODEL JAAIVD010000013;XR_004386265 snrna 626158110 LOC116904628 olfactory receptor 13A1 6 30217297 30224942 - 22301074 116904628 MODEL JAAIVD010000024;XM_032907419;XM_032907420 XP_032763310;XP_032763311 protein-coding 626158116 LOC116904815 U6 spliceosomal RNA 6 18502947 18503050 - 116904815 MODEL JAAIVD010000024;XR_004388466 snrna 626158119 LOC116893467 sperm motility kinase X-like 2 180178155 180197799 + 22301074;30032202 116893467 MODEL JAAIVD010000001;XM_032895226 XP_032751117 protein-coding 626158125 Gltpd2 glycolipid transfer protein domain containing 2 9 50133696 50135207 + 22301074;30032202 116909622 MODEL JAAIVD010000002;XM_032913250 XP_032769141 glycolipid transfer protein domain-containing protein 2 protein-coding 626158131 LOC116902649 U12 minor spliceosomal RNA 5 4563375 4563525 + 116902649 MODEL JAAIVD010000023;XR_004388216 snrna 626158134 Armc5 armadillo repeat containing 5 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN adrenal cortex development (ortholog); CD4-positive, alpha-beta T cell differentiation (ortholog); defense response to virus (ortholog); ASSOCIATED WITH ACTH-independent macronodular adrenal hyperplasia 1 (ortholog); ACTH-independent macronodular adrenal hyperplasia 2 (ortholog); genetic disease (ortholog); FOUND IN chromatin (ortholog); Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog) 2 73691740 73698526 - 22301074;30032202 116891441 MODEL JAAIVD010000001;XM_032892505 XP_032748396 armadillo repeat-containing protein 5 protein-coding 626158144 Trip6 thyroid hormone receptor interactor 6 ENCODES a protein that exhibits interleukin-1 receptor binding (ortholog); kinase binding (ortholog); INVOLVED IN chordate embryonic development (ortholog); positive regulation of cell migration (ortholog); positive regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN cytoskeleton (ortholog); cytosol (ortholog); focal adhesion (ortholog) 16 16716864 16721090 + 30032202 116885205 MODEL JAAIVD010000004;XM_032886438 XP_032742329 thyroid receptor-interacting protein 6 protein-coding 626158156 Zc2hc1b zinc finger C2HC-type containing 1B 2 224016051 224042868 + 116893011 MODEL JAAIVD010000001;XM_032894974 XP_032750865 zinc finger C2HC domain-containing protein 1B protein-coding 626158166 Arsa arylsulfatase A ENCODES a protein that exhibits arylsulfatase activity (ortholog); calcium ion binding (ortholog); sulfuric ester hydrolase activity (ortholog); INVOLVED IN autophagy (ortholog); binding of sperm to zona pellucida (ortholog); response to estrogen (ortholog); PARTICIPATES IN Fabry disease pathway; Gaucher's disease pathway; Krabbe disease pathway; ASSOCIATED WITH Autosomal Sideroblastic Anemia (ortholog); citrullinemia (ortholog); frontotemporal dementia (ortholog); FOUND IN acrosomal vesicle (ortholog); endosome (ortholog); extracellular space (ortholog) 1 258779114 258783658 - 30032202 116915204 MODEL JAAIVD010000025;XM_032919576 XP_032775467 protein-coding 626158178 Slc24a3 solute carrier family 24 member 3 ENCODES a protein that exhibits calcium, potassium:sodium antiporter activity (ortholog); INVOLVED IN bone mineralization (ortholog); calcium ion transmembrane transport (ortholog); intracellular calcium ion homeostasis (ortholog); PARTICIPATES IN calcium transport pathway; calcium/calcium-mediated signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Salivary Gland Neoplasms (ortholog); FOUND IN cell periphery (ortholog); plasma membrane (ortholog) 5 124859938 125267030 + 22301074;30032202 116902054 MODEL JAAIVD010000023;XM_032904340 XP_032760231 sodium/potassium/calcium exchanger 3 protein-coding 626158198 Map1s microtubule associated protein 1S ENCODES a protein that exhibits actin filament binding (ortholog); beta-tubulin binding (ortholog); DNA binding (ortholog); INVOLVED IN brain development (ortholog); metaphase chromosome alignment (ortholog); microtubule anchoring at centrosome (ortholog); FOUND IN cell projection (ortholog); centrosome (ortholog); cytosol (ortholog) 13 13155316 13165466 + 30032202 116914577 MODEL JAAIVD010000008;XM_032918936 XP_032774827 microtubule-associated protein 1S protein-coding 626158210 Arhgef39 Rho guanine nucleotide exchange factor 39 INVOLVED IN positive regulation of cell migration (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN plasma membrane (ortholog) 1 2997878 3001517 + 22301074;30032202 116891021 MODEL JAAIVD010000025;XM_032891704 XP_032747595 protein-coding 626158223 Ikzf5 IKAROS family zinc finger 5 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); protein domain specific binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH Thrombocytopenia 7 (ortholog); FOUND IN nucleus (ortholog); protein-containing complex (ortholog) 2 70437683 70457428 + 30032202 116891404 MODEL JAAIVD010000001;XM_032892430;XM_032892431 XP_032748321;XP_032748322 zinc finger protein Pegasus protein-coding 626158234 LOC116898359 60S ribosomal protein L32-like 4 56323693 56333266 - 116898359 MODEL JAAIVD010000003 pseudo 626158235 LOC116897012 bone morphogenetic protein 8A-like 1 34922892 34950389 + 22301074;30032202 116897012 MODEL JAAIVD010000025;XM_032898619 XP_032754510 protein-coding 626158246 Shisa6 shisa family member 6 ENCODES a protein that exhibits ionotropic glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN excitatory chemical synaptic transmission (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); postsynaptic neurotransmitter receptor diffusion trapping (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); asymmetric, glutamatergic, excitatory synapse (ortholog); glutamatergic synapse (ortholog) 9 45816924 46112839 - 30032202 116910291 MODEL JAAIVD010000002;XM_032914165 XP_032770056 protein shisa-6 protein-coding 626158255 LOC116915133 small nucleolar RNA SNORA17 13 39066873 39067000 + 116915133 MODEL JAAIVD010000008;XR_004389812 snorna 626158258 Slc12a6 solute carrier family 12 member 6 ENCODES a protein that exhibits potassium ion transmembrane transporter activity (ortholog); potassium:chloride symporter activity (ortholog); protein kinase binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); cellular hypotonic response (ortholog); cellular hypotonic salinity response (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH agenesis of the corpus callosum with peripheral neuropathy (ortholog); Charcot-Marie-Tooth disease (ortholog); Charcot-Marie-Tooth Disease Axonal Type 2II (ortholog); FOUND IN axon (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 5 90591233 90686096 + 22301074;30032202 116901743 MODEL JAAIVD010000023;XM_032903878;XM_032903879;XM_032903880 XP_032759769;XP_032759770;XP_032759771 protein-coding 626158291 LOC116902626 small nucleolar SNORD12/SNORD106 5 150911512 150911600 - 116902626 MODEL JAAIVD010000023;XR_004388203 snorna 626158294 LOC116913352 M1-specific T cell receptor alpha chain-like 12 70783877 71279019 - 30032202 116913352 A2NUS4 MODEL JAAIVD010000007;XM_032917508 XP_032773399 protein-coding 626158305 LOC116912830 uncharacterized LOC116912830 11 68001082 68003753 - 116912830 MODEL JAAIVD010000006;XR_004389482 ncrna 626158309 Notch1 notch receptor 1 ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); enzyme binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); aortic valve morphogenesis (ortholog); apoptotic process involved in embryonic digit morphogenesis (ortholog); PARTICIPATES IN altered Notch signaling pathway involving the main players; Notch signaling pathway; Notch signaling pathway; ASSOCIATED WITH Adams-Oliver syndrome (ortholog); Adams-Oliver Syndrome 2 (ortholog); Adams-Oliver Syndrome 5 (ortholog); FOUND IN acrosomal vesicle (ortholog); adherens junction (ortholog); apical plasma membrane (ortholog) 5 10588654 10634419 + 1764995;22301074;30032202 116901266 MODEL JAAIVD010000023;X57405;XM_032903023 CAA40667;XP_032758914 neurogenic locus notch homolog protein 1;notch protein protein-coding 626158347 LOC116900852 putative olfactory receptor 5AK3 5 62715383 62716364 - 116900852 MODEL JAAIVD010000023 pseudo 626158348 LOC116898033 triggering receptor expressed on myeloid cells 3 4 81676455 81683237 - 30032202 116898033 MODEL JAAIVD010000003;XM_032899422;XM_032899423 XP_032755313;XP_032755314 protein-coding 626158360 Slc29a2 solute carrier family 29 member 2 ENCODES a protein that exhibits adenine transmembrane transporter activity (ortholog); cytidine transmembrane transporter activity (ortholog); guanine transmembrane transporter activity (ortholog); INVOLVED IN adenine transport (ortholog); adenosine transport (ortholog); cellular response to insulin stimulus (ortholog); PARTICIPATES IN azathioprine pharmacodynamics pathway; mercaptopurine pharmacodynamics pathway; mercaptopurine pharmacokinetics pathway; FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); plasma membrane (ortholog) 2 2623454 2630914 - 22301074;30032202 116890748 MODEL JAAIVD010000001;XM_032891204 XP_032747095 equilibrative nucleoside transporter 2 protein-coding 626158376 Ugt1a6 UDP glucuronosyltransferase family 1 member A6 ENCODES a protein that exhibits enzyme binding (ortholog); glucuronosyltransferase activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN 4-chlorobiphenyl metabolic process (ortholog); cellular response to glucocorticoid stimulus (ortholog); cellular response to hormone stimulus (ortholog); PARTICIPATES IN paracetamol pharmacokinetics pathway; phenytoin pharmacodynamics pathway; ASSOCIATED WITH autism spectrum disorder (ortholog); contact dermatitis (ortholog); Crigler-Najjar syndrome (ortholog); FOUND IN endoplasmic reticulum (ortholog); protein-containing complex (ortholog) 4 160198180 160200080 + 22301074 116899617 MODEL JAAIVD010000003;XM_032901578 XP_032757469 UDP-glucuronosyltransferase 1-6 protein-coding 626158381 Clic4 chloride intracellular channel 4 ENCODES a protein that exhibits chloride channel activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); branching morphogenesis of an epithelial tube (ortholog); cellular response to calcium ion (ortholog); ASSOCIATED WITH Dwarfism (ortholog); osteoarthritis (ortholog); Prostatic Neoplasms (ortholog); FOUND IN apical part of cell (ortholog); cell surface (ortholog); cell-cell junction (ortholog) 1 22945564 23005162 + 116894563 MODEL JAAIVD010000025;XM_032896277 XP_032752168 chloride intracellular channel protein 4 protein-coding 626158391 LOC116886979 egl nine homolog 1-like 18 43871896 43873829 - 116886979 MODEL JAAIVD010000013 pseudo 626158392 Kansl1l KAT8 regulatory NSL complex subunit 1 like 4 140046709 140152463 + 30032202 116899468 MODEL JAAIVD010000003;XM_032901265;XM_032901267;XM_032901268;XM_032901269;XM_032901270;XM_032901271;XM_032901272;XM_032901273;XM_032901274;XM_032901275;XM_032901276;XM_032901278;XM_032901279 XP_032757156;XP_032757158;XP_032757159;XP_032757160;XP_032757161;XP_032757162;XP_032757163;XP_032757164;XP_032757165;XP_032757166;XP_032757167;XP_032757169;XP_032757170 KAT8 regulatory NSL complex subunit 1-like protein protein-coding 626158434 LOC116894994 small nucleolar RNA SNORA32 2 222124434 222124553 + 116894994 MODEL JAAIVD010000001;XR_004387185 snorna 626158437 Cd2bp2 CD2 cytoplasmic tail binding protein 2 ENCODES a protein that exhibits ribonucleoprotein complex binding (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nuclear speck (ortholog) 2 74694547 74698663 + 22301074;30032202 116891486 MODEL JAAIVD010000001;XM_032892590;XM_032892591 XP_032748481;XP_032748482 CD2 antigen cytoplasmic tail-binding protein 2 protein-coding 626158450 LOC116887556 HLA class II histocompatibility antigen, DP beta 1 chain-like 18 8241507 8251548 + 22301074;30032202 116887556 MODEL JAAIVD010000013;XM_032889185 XP_032745076 protein-coding 626158462 LOC116889448 U6 spliceosomal RNA X 110101825 110101921 - 116889448 MODEL JAAIVD010000014 pseudo 626158463 LOC116907246 partner of Y14 and mago-like 1 159779347 159797894 - 116907246 MODEL JAAIVD010000025 pseudo 626158464 Papss1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 ENCODES a protein that exhibits adenylylsulfate kinase activity (ortholog); protein homodimerization activity (ortholog); sulfate adenylyltransferase (ATP) activity (ortholog); INVOLVED IN 3'-phosphoadenosine 5'-phosphosulfate biosynthetic process (ortholog); sulfate assimilation (ortholog); PARTICIPATES IN selenoamino acid metabolic pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (ortholog); nucleus (ortholog) 3 27316540 27390894 - 22301074;30032202 116896239 MODEL JAAIVD010000012;XM_032897305 XP_032753196 bifunctional 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein-coding 626158480 LOC116888531 histone H2A-Bbd type 1-like X 11888576 11889703 - 22301074;30032202 116888531 MODEL JAAIVD010000014;XM_032889828 XP_032745719 protein-coding 626158485 LOC116914674 protein kinase C-binding protein 1-like 13 35462462 35464123 - 116914674 MODEL JAAIVD010000008 pseudo 626158486 LOC116904595 dnaJ homolog subfamily A member 2-like 6 24196550 24197342 + 22301074;30032202 116904595 MODEL JAAIVD010000024;XM_032907390 XP_032763281 protein-coding 626158491 Urad ureidoimidazoline (2-oxo-4-hydroxy-4-carboxy-5-) decarboxylase ENCODES a protein that exhibits 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity (ortholog); carboxy-lyase activity (ortholog); INVOLVED IN adenosine catabolic process (ortholog); allantoin metabolic process (ortholog); amide catabolic process (ortholog); FOUND IN peroxisome (ortholog) 16 6527434 6536905 + 22301074;30032202 116885452 MODEL JAAIVD010000004;XM_032886736 XP_032742627 putative 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase protein-coding 626158496 LOC116911846 small nucleolar RNA SNORA17 10 78675930 78676050 + 116911846 MODEL JAAIVD010000005 pseudo 626158497 LOC116900480 olfactory receptor 4C45-like 5 71609917 71610849 + 22301074 116900480 MODEL JAAIVD010000023;XM_032902216 XP_032758107 protein-coding 626158501 Inhbe inhibin subunit beta E ENCODES a protein that exhibits cytokine activity (ortholog); INVOLVED IN activin receptor signaling pathway (ortholog); negative regulation of adipose tissue development (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); lipid storage disease (ortholog) 1 205785301 205786632 - 22301074;30032202 116890043 MODEL JAAIVD010000025;XM_032890814 XP_032746705 inhibin beta E chain protein-coding 626158506 LOC116914127 U1 spliceosomal RNA 12 26494167 26494320 + 116914127 MODEL JAAIVD010000007 pseudo 626158507 LOC116894933 small nucleolar RNA SNORD115 2 140298790 140298868 - 116894933 MODEL JAAIVD010000001;XR_004387132 snorna 626158510 LOC116906161 40S ribosomal protein S28-like 7 99543316 99543525 - 116906161 MODEL JAAIVD010000026 pseudo 626158511 Fzd9 frizzled class receptor 9 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); Wnt receptor activity (ortholog); INVOLVED IN B cell differentiation (ortholog); bone regeneration (ortholog); learning or memory (ortholog); PARTICIPATES IN Wnt signaling pathway; ASSOCIATED WITH Williams-Beuren syndrome (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); filopodium membrane (ortholog) 16 18768655 18772768 + 30032202 116885754 MODEL JAAIVD010000004;XM_032887070 XP_032742961 frizzled-9 protein-coding 626158516 Arhgap8 Rho GTPase activating protein 8 ENCODES a protein that exhibits GTPase activator activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); positive regulation of cell migration (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog) 1 254124711 254161286 + 30032202 116914582 MODEL JAAIVD010000025;XM_032918943 XP_032774834 rho GTPase-activating protein 8 protein-coding 626158531 Slc35d1 solute carrier family 35 member D1 ENCODES a protein that exhibits antiporter activity (ortholog); pyrimidine nucleotide-sugar transmembrane transporter activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); embryonic skeletal system development (ortholog); pyrimidine nucleotide-sugar transmembrane transport (ortholog); ASSOCIATED WITH connective tissue disease (ortholog); Craniofacial Abnormalities (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog) 1 51359275 51409096 + 30032202 116899505 MODEL JAAIVD010000025;XM_032901359 XP_032757250 UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter protein-coding 626158547 Tnfaip1 TNF alpha induced protein 1 ENCODES a protein that exhibits cyclin binding (ortholog); identical protein binding (ortholog); small GTPase binding (ortholog); INVOLVED IN cell migration (ortholog); immune response (ortholog); negative regulation of Rho protein signal transduction (ortholog); ASSOCIATED WITH Diabetic Nephropathies (ortholog); FOUND IN Cul3-RING ubiquitin ligase complex (ortholog); cytoplasm (ortholog); endosome (ortholog) 9 91905652 91920434 + 22301074;30032202 116910625 MODEL JAAIVD010000002;XM_032914573 XP_032770464 BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 2 protein-coding 626158558 LOC116911665 major histocompatibility complex class I-related gene protein ENCODES a protein that exhibits beta-2-microglobulin binding (ortholog); T cell receptor binding (ortholog); INVOLVED IN antigen processing and presentation of exogenous antigen (ortholog); defense response to Gram-negative bacterium (ortholog); defense response to Gram-positive bacterium (ortholog); FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 10 34547868 34565381 - 30032202 116911665 MODEL JAAIVD010000005;XM_032915619;XM_032915620 XP_032771510;XP_032771511 protein-coding 626158570 Aurkc aurora kinase C ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN protein phosphorylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); male infertility (ortholog); spermatogenic failure (ortholog); FOUND IN chromosome (ortholog); chromosome, centromeric region (ortholog); condensed chromosome (ortholog) 2 179118391 179139697 - 22301074;30032202 116892715 MODEL JAAIVD010000001;XM_032894581;XM_032894582;XM_032894583 XP_032750472;XP_032750473;XP_032750474 protein-coding 626158591 Rad54l RAD54 like ENCODES a protein that exhibits ATP-dependent DNA/DNA annealing activity (ortholog); INVOLVED IN chromosome organization (ortholog); determination of adult lifespan (ortholog); DNA damage response (ortholog); ASSOCIATED WITH breast cancer (ortholog); Breast Cancer, Familial (ortholog); breast ductal carcinoma (ortholog); FOUND IN nucleoplasm (ortholog); protein-containing complex (ortholog) 1 39776217 39805318 - 22301074;30032202 116898232 MODEL JAAIVD010000025;XM_032899587 XP_032755478 DNA repair and recombination protein RAD54-like protein-coding 626158614 LOC116912900 60S ribosomal protein L12-like 11 5667151 5667690 - 116912900 MODEL JAAIVD010000006 pseudo 626158615 Spdya speedy/RINGO cell cycle regulator family member A ENCODES a protein that exhibits protein kinase activator activity (ortholog); protein kinase binding (ortholog); INVOLVED IN DNA damage response (ortholog); establishment of protein localization to telomere (ortholog); G1/S transition of mitotic cell cycle (ortholog); FOUND IN chromosome, telomeric region (ortholog); endoplasmic reticulum exit site (ortholog); nuclear envelope (ortholog) 7 21619098 21666651 - 22301074;30032202 116905957 MODEL JAAIVD010000026;XM_032908957;XM_032908959;XM_032908960;XM_032908961 XP_032764848;XP_032764850;XP_032764851;XP_032764852 speedy protein A protein-coding 626158634 LOC116904336 pancreatic beta cell growth factor-like 6 67946119 67948559 + 116904336 MODEL JAAIVD010000024 pseudo 626158635 LOC116901883 thymidine kinase, cytosolic-like 5 100349153 100349828 - 116901883 MODEL JAAIVD010000023 pseudo 626158636 LOC116914328 gem-associated protein 8-like 13 45907644 45908330 - 116914328 MODEL JAAIVD010000008 pseudo 626158637 LOC116907629 uncharacterized protein CXorf40 homolog 8 34634512 34639060 - 116907629 MODEL JAAIVD010000027;XM_032910689 XP_032766580 protein-coding 626158644 LOC116890675 sororin-like 2 1598074 1604416 - 116890675 MODEL JAAIVD010000001;XM_032891083 XP_032746974 protein-coding 626158654 Drd3 dopamine receptor D3 ENCODES a protein that exhibits D1 dopamine receptor binding (ortholog); dopamine neurotransmitter receptor activity, coupled via Gi/Go (ortholog); protein domain specific binding (ortholog); INVOLVED IN acid secretion (ortholog); adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-inhibiting dopamine receptor signaling pathway (ortholog); PARTICIPATES IN dopamine signaling pathway; dopamine signaling pathway via D2 family of receptors; G protein mediated signaling pathway via Galphai family; ASSOCIATED WITH absence epilepsy (ortholog); Alzheimer's disease (ortholog); amnestic disorder (ortholog); FOUND IN apical part of cell (ortholog); cell projection (ortholog); dopaminergic synapse (ortholog) 4 28657039 28717695 + 22301074;30032202 116897882 MODEL JAAIVD010000003;XM_032899286;XM_032899288;XM_032899289 XP_032755177;XP_032755179;XP_032755180 D(3) dopamine receptor protein-coding 626158673 Nox1 NADPH oxidase 1 ENCODES a protein that exhibits NAD(P)H oxidase H2O2-forming activity (ortholog); small GTPase binding (ortholog); superoxide-generating NAD(P)H oxidase activity (ortholog); INVOLVED IN angiogenesis (ortholog); cell chemotaxis (ortholog); cell migration (ortholog); ASSOCIATED WITH aortic atherosclerosis (ortholog); aortic dissection (ortholog); Chronic Cerebral Hypoperfusion (ortholog); FOUND IN cytoplasm (ortholog); early endosome (ortholog); endosome (ortholog) X 86410294 86436545 - 30032202 116888379 MODEL JAAIVD010000014;XM_032889657 XP_032745548 protein-coding 626158690 LOC116893164 olfactory receptor 51H1-like 2 102597638 102598615 + 22301074 116893164 MODEL JAAIVD010000001;XM_032895077 XP_032750968 protein-coding 626158693 LOC116894688 ruvB-like 1 2 213914822 213916178 - 116894688 MODEL JAAIVD010000001 pseudo 626158694 LOC116912488 serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit delta-like 11 18704329 18711520 - 22301074;30032202 116912488 MODEL JAAIVD010000006;XM_032916563;XM_032916564;XM_032916565 XP_032772454;XP_032772455;XP_032772456 protein-coding 626158717 Dhrsx dehydrogenase/reductase X-linked ENCODES a protein that exhibits dolichal reductase (NADPH) activity (ortholog); polyprenol dehydrogenase (NAD+) activity (ortholog); INVOLVED IN obsolete dolichol biosynthetic process (ortholog); positive regulation of autophagy (ortholog); ASSOCIATED WITH Congenital disorder of glycosylation, type 1DD (ortholog); FOUND IN extracellular region (ortholog); lipid droplet (ortholog) 16 14886649 14891579 + 116885898 MODEL JAAIVD010000004;XM_032887217 XP_032743108 dehydrogenase/reductase SDR family member on chromosome X protein-coding 626158728 Tektip1 tektin bundle interacting protein 1 INVOLVED IN flagellated sperm motility (ortholog); FOUND IN axonemal A tubule inner sheath (ortholog); sperm flagellum (ortholog) 1 153526138 153528591 + 116904361 MODEL JAAIVD010000025;XM_032907246 XP_032763137 C1H19orf71 chromosome 1 C19orf71 homolog;uncharacterized protein C19orf71 homolog protein-coding 626158736 Mcam melanoma cell adhesion molecule INVOLVED IN angiogenesis (ortholog); glomerular filtration (ortholog); positive regulation of cell migration (ortholog); ASSOCIATED WITH autoimmune disease of the nervous system (ortholog); chronic obstructive pulmonary disease (ortholog); Emphysema (ortholog); FOUND IN external side of plasma membrane (ortholog); extracellular space (ortholog) 8 38695953 38703467 + 30032202 116907609 MODEL JAAIVD010000027;XM_032910664 XP_032766555 cell surface glycoprotein MUC18 protein-coding 626158756 Ankrd22 ankyrin repeat domain 22 2 33733825 33763047 - 22301074 116893780 MODEL JAAIVD010000001;XM_032895483 XP_032751374 ankyrin repeat domain-containing protein 22 protein-coding 626158765 Cadps calcium dependent secretion activator ENCODES a protein that exhibits calcium ion binding (ortholog); phosphatidylinositol-4,5-bisphosphate binding (ortholog); protein kinase binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); catecholamine secretion (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytoplasmic vesicle (ortholog); cytosol (ortholog); dense core granule (ortholog) 12 82442605 82885244 - 30032202 116913701 MODEL JAAIVD010000007;XM_032917997 XP_032773888 calcium-dependent secretion activator 1 protein-coding 626158800 LOC116900347 oogenesin-2-like 5 69023112 69026587 + 22301074;30032202 116900347 MODEL JAAIVD010000023;XM_032902100 XP_032757991 protein-coding 626158808 Polb DNA polymerase beta ENCODES a protein that exhibits 5'-deoxyribose-5-phosphate lyase activity (ortholog); class I DNA-(apurinic or apyrimidinic site) endonuclease activity (ortholog); damaged DNA binding (ortholog); INVOLVED IN apoptotic process (ortholog); base-excision repair (ortholog); base-excision repair, gap-filling (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); Colonic Neoplasms (ortholog); middle cerebral artery infarction (ortholog); FOUND IN cytoplasm (ortholog); microtubule (ortholog); nucleus (ortholog) 13 63779772 63803237 + 22301074;30032202 116914470 MODEL JAAIVD010000008;XM_032918769 XP_032774660 protein-coding 626158826 LOC116893576 uncharacterized LOC116893576 1 17452812 17453275 + 116893576 MODEL JAAIVD010000025;XR_004386997 ncrna 626158830 LOC116895680 metal-response element-binding transcription factor 2-like 3 200132963 200134423 + 116895680 MODEL JAAIVD010000012 pseudo 626158831 Nr6a1 nuclear receptor subfamily 6 group A member 1 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription repressor activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN gamete generation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of mesenchymal stem cell differentiation (ortholog); FOUND IN nucleus (ortholog); transcription regulator complex (ortholog) 5 16495284 16678853 - 22301074 116901367 MODEL JAAIVD010000023;XM_032903229;XM_032903230;XM_032903231;XM_032903232 XP_032759120;XP_032759121;XP_032759122;XP_032759123 protein-coding 626158851 Chrna3 cholinergic receptor nicotinic alpha 3 subunit ENCODES a protein that exhibits acetylcholine binding (ortholog); acetylcholine receptor activity (ortholog); acetylcholine-gated monoatomic cation-selective channel activity (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); behavioral response to nicotine (ortholog); excitatory postsynaptic potential (ortholog); PARTICIPATES IN acetylcholine signaling pathway via nicotinic acetylcholine receptor; nicotine pharmacodynamics pathway; nicotine pharmacokinetics pathway; ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); amyotrophic lateral sclerosis (ortholog); FOUND IN acetylcholine-gated channel complex (ortholog); cation channel complex (ortholog); cholinergic synapse (ortholog) 8 49087894 49102574 - 22301074;30032202 116907005 MODEL JAAIVD010000027;XM_032909932 XP_032765823 neuronal acetylcholine receptor subunit alpha-3 protein-coding 626158861 Ccnk cyclin K ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activity (ortholog); protein kinase binding (ortholog); RNA polymerase II CTD heptapeptide repeat kinase activity (ortholog); INVOLVED IN DNA damage response (ortholog); host-mediated suppression of viral genome replication (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN RNA polymerase II transcription elongation pathway; ASSOCIATED WITH INTELLECTUAL DEVELOPMENTAL DISORDER WITH HYPERTELORISM AND DISTINCTIVE FACIES (ortholog); FOUND IN cyclin K-CDK12 complex (ortholog); cyclin K-CDK13 complex (ortholog); nucleoplasm (ortholog) 7 125850995 125873594 + 30032202 116905446 MODEL JAAIVD010000026;XM_032908395;XM_032908396 XP_032764286;XP_032764287 cyclin-K protein-coding 626158879 C10H1orf115 chromosome 10 C1orf115 homolog INVOLVED IN regulation of response to drug (ortholog); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN 9+0 non-motile cilium (ortholog) 10 63041970 63051070 - 116911435 MODEL JAAIVD010000005;XM_032915404 XP_032771295 uncharacterized protein C1orf115 homolog protein-coding 626158885 LOC116895960 basic proline-rich protein-like 3 142821536 142822390 - 116895960 MODEL JAAIVD010000012;XM_032897010 XP_032752901 protein-coding 626158888 Tmem121b transmembrane protein 121B ASSOCIATED WITH COVID-19 (ortholog) 6 26258212 26262437 + 116903329 MODEL JAAIVD010000024;XM_032905774 XP_032761665 protein-coding 626158893 LOC116898295 gem-associated protein 8-like 4 181759362 181760076 - 116898295 MODEL JAAIVD010000003 pseudo 626158894 LOC116904750 small nucleolar RNA SNORA17 6 39820488 39820594 + 116904750 MODEL JAAIVD010000024 pseudo 626158895 LOC116895297 cytochrome c, somatic-like 3 19703682 19703987 - 116895297 MODEL JAAIVD010000012 pseudo 626158896 Afm afamin ENCODES a protein that exhibits vitamin E binding (ortholog); INVOLVED IN protein stabilization (ortholog); protein transport within extracellular region (ortholog); vitamin transport (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Drug-Related Side Effects and Adverse Reactions (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN extracellular space (ortholog) 11 3961481 3986611 + 22301074;30032202 116912244 MODEL JAAIVD010000006;XM_032916223 XP_032772114 protein-coding 626158914 LOC116885094 U6 spliceosomal RNA 15 66484199 66484296 + 116885094 MODEL JAAIVD010000010 pseudo 626158915 LOC116914040 olfactory receptor 4N2-like 12 72933249 72934175 - 22301074 116914040 MODEL JAAIVD010000007;XM_032918320 XP_032774211 protein-coding 626158918 Ptprf protein tyrosine phosphatase receptor type F ENCODES a protein that exhibits cell adhesion molecule binding (ortholog); chondroitin sulfate proteoglycan binding (ortholog); insulin receptor binding (ortholog); INVOLVED IN cell migration (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); negative regulation of cell population proliferation (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH Aplasia or Hypoplasia of Breasts and/or Nipples 2 (ortholog); congestive heart failure (ortholog); Disease Progression (ortholog); FOUND IN endosome (ortholog); excitatory synapse (ortholog); growth cone (ortholog) 1 38749448 38817950 + 22301074 116897841 MODEL JAAIVD010000025;XM_032899258;XM_032899261;XM_032899264;XM_032899270;XM_032899276;XM_032899283;XM_032899287;XM_032899292;XM_032899298;XM_032899304;XM_032899310;XM_032899315;XM_032899320;XM_032899327 XP_032755149;XP_032755152;XP_032755155;XP_032755161;XP_032755167;XP_032755174;XP_032755178;XP_032755183;XP_032755189;XP_032755195;XP_032755201;XP_032755206;XP_032755211;XP_032755218 receptor-type tyrosine-protein phosphatase F protein-coding 626158971 Klhl1 kelch like family member 1 INVOLVED IN adult walking behavior (ortholog); cerebellar Purkinje cell layer development (ortholog); dendrite development (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); neuronal cell body (ortholog) 12 27926789 28403881 + 22301074 116913496 MODEL JAAIVD010000007;XM_032917698 XP_032773589 kelch-like protein 1 protein-coding 626158986 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60816837 60816908 - 116897682 MODEL JAAIVD010000012 trna 626158987 Lrrc43 leucine rich repeat containing 43 ASSOCIATED WITH COVID-19 (ortholog) 16 30339315 30356306 - 22301074 116885795 MODEL JAAIVD010000004;XM_032887127;XM_032887128 XP_032743018;XP_032743019 leucine-rich repeat-containing protein 43 protein-coding 626159005 Dync2h1 dynein cytoplasmic 2 heavy chain 1 ENCODES a protein that exhibits dynein light intermediate chain binding (ortholog); minus-end-directed microtubule motor activity (ortholog); INVOLVED IN central nervous system neuron differentiation (ortholog); cilium assembly (ortholog); coronary vasculature development (ortholog); ASSOCIATED WITH asphyxiating thoracic dystrophy (ortholog); asphyxiating thoracic dystrophy 1 (ortholog); asphyxiating thoracic dystrophy 3 (ortholog); FOUND IN apical part of cell (ortholog); axoneme (ortholog); cytoplasmic dynein complex (ortholog) 8 4445066 4643237 - 22301074;30032202 116907922 MODEL JAAIVD010000027;XM_032911133;XM_032911134;XM_032911135 XP_032767024;XP_032767025;XP_032767026 cytoplasmic dynein 2 heavy chain 1 protein-coding 626159090 Nmur2 neuromedin U receptor 2 ENCODES a protein that exhibits GTP binding (ortholog); intracellularly calcium-gated chloride channel activity (ortholog); neuromedin U binding (ortholog); INVOLVED IN arachidonate secretion (ortholog); grooming behavior (ortholog); neuropeptide signaling pathway (ortholog); FOUND IN membrane (ortholog); plasma membrane (ortholog) 9 39046659 39062326 - 22301074;30032202 116909655 MODEL JAAIVD010000002;XM_032913307 XP_032769198 neuromedin-U receptor 2 protein-coding 626159098 LOC116908435 U1 spliceosomal RNA 8 16779737 16779882 - 116908435 MODEL JAAIVD010000027 pseudo 626159099 LOC116897950 small ubiquitin-related modifier 1-like 4 19538940 19539314 - 116897950 MODEL JAAIVD010000003 pseudo 626159100 Lyrm7 LYR motif containing 7 INVOLVED IN cellular respiration (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH genetic disease (ortholog); mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 8 (ortholog); FOUND IN mitochondrial matrix (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 9 37279054 37295995 - 22301074 116909930 MODEL JAAIVD010000002;XM_032913699;XR_004389110;XR_004389111 XP_032769590 complex III assembly factor LYRM7 protein-coding 626159115 LOC116888658 uncharacterized LOC116888658 X 1149342 1157550 - 116888658 MODEL JAAIVD010000014;XR_004386332 ncrna 626159120 Tas2r60 taste 2 receptor member 60 ENCODES a protein that exhibits bitter taste receptor activity (ortholog); INVOLVED IN detection of chemical stimulus involved in sensory perception of bitter taste (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN membrane (ortholog) 6 97813129 97814079 - 22301074;30032202 116902897 MODEL JAAIVD010000024;XM_032905226 XP_032761117 taste receptor type 2 member 60 protein-coding 626159123 LOC116894123 olfactory receptor 52N2-like 2 103821789 103822745 - 22301074 116894123 MODEL JAAIVD010000001;XM_032895840 XP_032751731 protein-coding 626159126 LOC116900411 olfactory receptor 4P4 5 70281515 70282450 + 22301074 116900411 MODEL JAAIVD010000023;XM_032902156 XP_032758047 protein-coding 626159129 Mon2 MON2 homolog, regulator of endosome-to-Golgi trafficking FOUND IN early endosome membrane (ortholog) 1 201409884 201484446 - 116909609 MODEL JAAIVD010000025;XM_032913234;XM_032913243;XM_032913251;XM_032913259 XP_032769125;XP_032769134;XP_032769142;XP_032769150 protein MON2 homolog protein-coding 626159178 LOC116906293 uncharacterized LOC116906293 7 127070848 127087282 - 116906293 MODEL JAAIVD010000026;XR_004388589 ncrna 626159184 LOC116889002 sorbitol dehydrogenase-like X 13801582 13805410 + 116889002 MODEL JAAIVD010000014 pseudo 626159185 LOC116894618 lys-63-specific deubiquitinase BRCC36-like 2 186538828 186539701 - 116894618 MODEL JAAIVD010000001 pseudo 626159186 Ptpa protein phosphatase 2 phosphatase activator ENCODES a protein that exhibits ATP binding (ortholog); phosphatase binding (ortholog); phosphoprotein phosphatase activity (ortholog); INVOLVED IN positive regulation of apoptotic process (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Disease Progression (ortholog); Parkinson's disease 25 (ortholog); Stomach Neoplasms (ortholog); FOUND IN ATPase complex (ortholog); calcium channel complex (ortholog); cytoplasm (ortholog) 5 5184352 5214981 - 30032202 116901181 MODEL JAAIVD010000023;XM_032902852;XM_032902853 XP_032758743;XP_032758744 serine/threonine-protein phosphatase 2A activator protein-coding 626159204 LOC116904349 signal peptidase complex subunit 2-like 6 73895114 73896458 - 116904349 MODEL JAAIVD010000024 pseudo 626159205 LOC116909501 aurora kinase A-like 9 7758252 7759505 + 116909501 MODEL JAAIVD010000002;XR_004389077 pseudo 626159208 Samd10 sterile alpha motif domain containing 10 5 158684656 158689009 - 22301074;30032202 116902450 MODEL JAAIVD010000023;XM_032905011;XM_032905012 XP_032760902;XP_032760903 sterile alpha motif domain-containing protein 10 protein-coding 626159221 Hunk hormonally up-regulated Neu-associated kinase ENCODES a protein that exhibits protein kinase activity (ortholog) 4 54095462 54204792 - 22301074;30032202 116899010 MODEL JAAIVD010000003;XM_032900458 XP_032756349 hormonally up-regulated neu tumor-associated kinase protein-coding 626159236 Dennd11 DENN domain containing 11 6 99374674 99401431 + 30032202 116903917 MODEL JAAIVD010000024;XM_032906689 XP_032762580 DENN domain-containing protein 11 protein-coding 626159249 Paxbp1 PAX3 and PAX7 binding protein 1 ENCODES a protein that exhibits histone methyltransferase binding (ortholog); INVOLVED IN positive regulation of myoblast proliferation (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); regulation of skeletal muscle satellite cell proliferation (ortholog); ASSOCIATED WITH High Myopia (ortholog); FOUND IN nucleus (ortholog) 4 53545615 53574619 + 30032202 116899003 MODEL JAAIVD010000003;XM_032900448 XP_032756339 PAX3- and PAX7-binding protein 1 protein-coding 626159271 LOC116910757 small nucleolar RNA U3 9 83324331 83324545 - 116910757 MODEL JAAIVD010000002;XR_004389268 snorna 626159274 LOC116888336 olfactory receptor 10A5-like X 113116388 113117341 + 22301074 116888336 MODEL JAAIVD010000014;XM_032889606 XP_032745497 protein-coding 626159278 LOC116905617 peptidyl-prolyl cis-trans isomerase D-like 7 17147611 17149010 + 116905617 MODEL JAAIVD010000026 pseudo 626159279 LOC116906825 uncharacterized LOC116906825 8 81414703 81416308 + 116906825 MODEL JAAIVD010000027;XR_004388773;XR_004388774;XR_004388775;XR_004388776 ncrna 626159294 LOC116887555 antigen peptide transporter 2-like 18 8109396 8122266 - 116887555 MODEL JAAIVD010000013 pseudo 626159295 LOC116894919 small nucleolar RNA SNORD15 2 97750327 97750471 - 116894919 MODEL JAAIVD010000001;XR_004387119 snorna 626159298 Dlec1 DLEC1 cilia and flagella associated protein ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); INVOLVED IN defense response to tumor cell (ortholog); spermatogenesis (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); esophageal cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog) 8 110342414 110390025 + 30032202 116907904 MODEL JAAIVD010000027;XM_032911104 XP_032766995 deleted in lung and esophageal cancer protein 1 protein-coding 626159338 LOC116910748 U2 spliceosomal RNA 9 60947209 60947399 + 116910748 MODEL JAAIVD010000002;XR_004389261 snrna 626159341 LOC116894172 olfactory receptor 10A5-like 2 105214197 105215147 + 22301074 116894172 MODEL JAAIVD010000001;XM_032895888 XP_032751779 protein-coding 626159344 LOC116894284 60S ribosomal protein L26-like 2 126629687 126630103 + 22301074;30032202 116894284 MODEL JAAIVD010000001;XM_032895992 XP_032751883 protein-coding 626159348 Myh14 myosin heavy chain 14 ENCODES a protein that exhibits actin filament binding (ortholog); ATP binding (ortholog); microfilament motor activity (ortholog); INVOLVED IN actin filament-based movement (ortholog); actomyosin structure organization (ortholog); mitochondrion organization (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness (ortholog); autosomal dominant nonsyndromic deafness 4A (ortholog); Charcot-Marie-Tooth disease (ortholog); FOUND IN actomyosin (ortholog); axon (ortholog); brush border (ortholog) 2 154869986 154929262 + 22301074 116892198 MODEL JAAIVD010000001;XM_032893734;XM_032893735 XP_032749625;XP_032749626 myosin-14 protein-coding 626159397 Ccdc71l coiled-coil domain containing 71 like ASSOCIATED WITH breast ductal carcinoma (ortholog); invasive ductal carcinoma (ortholog) 7 45737520 45742007 + 116904962 MODEL JAAIVD010000026;XM_032907623 XP_032763514 coiled-coil domain-containing protein 71L protein-coding 626159402 Ubxn2b UBX domain protein 2B INVOLVED IN establishment of mitotic spindle orientation (ortholog); negative regulation of protein localization to centrosome (ortholog); positive regulation of mitotic centrosome separation (ortholog); FOUND IN spindle pole centrosome (ortholog) 1 136760570 136784571 - 30032202 116903620 MODEL JAAIVD010000025;XM_032906277;XM_032906284 XP_032762168;XP_032762175 UBX domain-containing protein 2B protein-coding 626159415 LOC116889763 uncharacterized protein KIAA2012 homolog 116889763 MODEL JAAIVD010000081;XM_032890623 XP_032746514 protein-coding 626159416 LOC116914996 igE-binding protein-like 13 28603351 28606831 - 22301074 116914996 MODEL JAAIVD010000008;XM_032919401 XP_032775292 protein-coding 626159422 Ube2q1 ubiquitin conjugating enzyme E2 Q1 ENCODES a protein that exhibits ubiquitin conjugating enzyme activity (ortholog); INVOLVED IN embryo implantation (ortholog); fertilization (ortholog); mating behavior (ortholog) 3 63875497 63885847 - 116896632 MODEL JAAIVD010000012;XM_032897942;XM_032897944 XP_032753833;XP_032753835 ubiquitin-conjugating enzyme E2 Q1 protein-coding 626159443 LOC116896731 farnesyl pyrophosphate synthase-like 3 68139437 68140568 + 30032202 116896731 MODEL JAAIVD010000012;XM_032898153 XP_032754044 protein-coding 626159448 LOC116909991 trafficking protein particle complex subunit 2 9 34266775 34267479 - 22301074;30032202 116909991 MODEL JAAIVD010000002;XM_032913774 XP_032769665 protein-coding 626159453 LOC116906164 non-histone chromosomal protein HMG-17-like 7 101032280 101033820 - 116906164 MODEL JAAIVD010000026 pseudo 626159454 Ganab glucosidase II alpha subunit ENCODES a protein that exhibits alpha-glucosidase activity (ortholog); Glc2Man9GlcNAc2 oligosaccharide glucosidase activity (ortholog); glucan 1,3-alpha-glucosidase activity (ortholog); INVOLVED IN N-glycan processing (ortholog); ASSOCIATED WITH autosomal dominant polycystic kidney disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); chronic kidney disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); glucosidase II complex (ortholog) 2 9024927 9044527 - 22301074;30032202 116890918 MODEL JAAIVD010000001;XM_032891548;XM_032891549;XM_032891550 XP_032747439;XP_032747440;XP_032747441 neutral alpha-glucosidase AB protein-coding 626159487 LOC116904927 cytochrome c oxidase subunit 8C, mitochondrial FOUND IN mitochondrion (ortholog) 7 114171593 114172893 + 22301074;30032202 116904927 MODEL JAAIVD010000026;XM_032907557 XP_032763448 protein-coding 626159493 Ctdnep1 CTD nuclear envelope phosphatase 1 ENCODES a protein that exhibits phosphoprotein phosphatase activity (ortholog); protein serine/threonine phosphatase activity (ortholog); INVOLVED IN gamete generation (ortholog); mesoderm development (ortholog); nuclear envelope organization (ortholog); FOUND IN cytoplasm (ortholog); endoplasmic reticulum membrane (ortholog); lipid droplet (ortholog) 9 49588883 49597716 + 30032202 116910567 MODEL JAAIVD010000002;XM_032914483;XM_032914484;XM_032914485;XM_032914486 XP_032770374;XP_032770375;XP_032770376;XP_032770377 protein-coding 626159512 LOC116907971 60S ribosomal protein L10a-like 8 115228597 115229288 - 116907971 MODEL JAAIVD010000027 pseudo 626159513 Arpc1a actin related protein 2/3 complex subunit 1A PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH pancreatic cancer (ortholog); schizophrenia (ortholog); FOUND IN glutamatergic synapse (ortholog); muscle cell projection membrane (ortholog); synapse (ortholog) 16 8187462 8209667 - 22301074;30032202 116885359 MODEL JAAIVD010000004;XM_032886633 XP_032742524 actin-related protein 2/3 complex subunit 1A protein-coding 626159527 LOC116884331 cytochrome c oxidase subunit 7C, mitochondrial-like 15 5849857 5850026 + 116884331 MODEL JAAIVD010000010 pseudo 626159528 Aqp3 aquaporin 3 (Gill blood group) ENCODES a protein that exhibits glycerol channel activity (ortholog); identical protein binding (ortholog); polyol transmembrane transporter activity (ortholog); INVOLVED IN cellular response to hypoxia (ortholog); establishment of localization in cell (ortholog); glycerol transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; ASSOCIATED WITH brain edema (ortholog); brain ischemia (ortholog); Esophageal Neoplasms (ortholog); FOUND IN basolateral plasma membrane (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 1 117077481 117082802 + 30032202;7517548 116902494 MODEL D17695;JAAIVD010000025;XM_032905027 BAA04559;XP_032760918 aquaporin-3 protein-coding 626159538 LOC116891345 solute carrier family 22 member 27-like 2 9484331 9496858 + 22301074;30032202 116891345 MODEL JAAIVD010000001;XM_032892337 XP_032748228 protein-coding 626159546 Dennd10 DENN domain containing 10 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN endosome transport via multivesicular body sorting pathway (ortholog); protein transport (ortholog); regulation of early endosome to late endosome transport (ortholog); FOUND IN late endosome (ortholog) 2 55318781 55342315 - 30032202 116891305 MODEL JAAIVD010000001;XM_032892216 XP_032748107 DENN domain-containing protein 10 protein-coding 626159558 Kctd20 potassium channel tetramerization domain containing 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive regulation of phosphorylation (ortholog); FOUND IN cytoplasm (ortholog) 18 4896182 4911076 - 22301074;30032202 116887192 MODEL JAAIVD010000013;XM_032888746;XM_032888747;XM_032888748;XM_032888749 XP_032744637;XP_032744638;XP_032744639;XP_032744640 BTB/POZ domain-containing protein KCTD20 protein-coding 626159579 LOC116893434 vomeronasal type-2 receptor 116-like 2 175961428 175978879 - 116893434 MODEL JAAIVD010000001 pseudo 626159580 LOC116911005 lymphocyte cytosolic protein 2-like 1 215513679 215515130 - 30032202 116911005 MODEL JAAIVD010000025;XM_032914734 XP_032770625 protein-coding 626159585 LOC116910977 high mobility group protein B3-like 10 91237963 91238457 - 30032202 116910977 MODEL JAAIVD010000005;XM_032914692 XP_032770583 protein-coding 626159588 LOC116884425 40S ribosomal protein S2-like 15 79290987 79301140 - 116884425 MODEL JAAIVD010000010 pseudo 626159589 LOC116900590 60S ribosomal protein L17-like 5 92057897 92058417 - 116900590 MODEL JAAIVD010000023 pseudo 626159590 LOC116910743 small nucleolar RNA SNORD10 9 49279852 49279993 - 116910743 MODEL JAAIVD010000002;XR_004389256 snorna 626159593 LOC116909080 39S ribosomal protein L50, mitochondrial-like 1 193745259 193745745 - 116909080 MODEL JAAIVD010000025 pseudo 626159594 LOC116896144 geranylgeranyl transferase type-2 subunit beta 3 7731356 7734201 + 30032202 116896144 MODEL JAAIVD010000012;XM_032897128 XP_032753019 protein-coding 626159603 LOC116912274 60S ribosomal protein L19-like 11 97041361 97042047 + 116912274 MODEL JAAIVD010000006 pseudo 626159604 Rgn regucalcin ENCODES a protein that exhibits calcium ion binding (ortholog); gluconolactonase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); kidney development (ortholog); L-ascorbic acid biosynthetic process (ortholog); ASSOCIATED WITH Chemical and Drug Induced Liver Injury (ortholog); Experimental Diabetes Mellitus (ortholog); Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) X 3269260 3286712 - 22301074;30032202 116888568 MODEL JAAIVD010000014;XM_032889872 XP_032745763 protein-coding 626159615 LOC116909578 olfactory receptor 1468-like 9 44707210 44708148 + 22301074;30032202 116909578 MODEL JAAIVD010000002;XM_032913199 XP_032769090 protein-coding 626159618 LOC116908428 U1 spliceosomal RNA 8 78298347 78298497 + 116908428 MODEL JAAIVD010000027 pseudo 626159619 LOC116894655 heterogeneous nuclear ribonucleoprotein A3-like 2 204940074 204941073 + 116894655 MODEL JAAIVD010000001 pseudo 626159620 Mok MOK protein kinase ASSOCIATED WITH mucopolysaccharidosis type IIID (ortholog); renal cell carcinoma (ortholog); FOUND IN ciliary base (ortholog); cilium (ortholog); nucleus (ortholog) 7 128377405 128408790 - 22301074;30032202 116905479 MODEL JAAIVD010000026;XM_032908457;XM_032908458;XM_032908459;XM_032908461;XM_032908462;XM_032908463;XM_032908464;XM_032908465;XM_032908466;XM_032908467;XM_032908468;XM_032908469;XM_032908470;XM_032908472 XP_032764348;XP_032764349;XP_032764350;XP_032764352;XP_032764353;XP_032764354;XP_032764355;XP_032764356;XP_032764357;XP_032764358;XP_032764359;XP_032764360;XP_032764361;XP_032764363 MAPK/MAK/MRK overlapping kinase protein-coding 626159666 LOC116889905 olfactory receptor 6C6-like 1 160200401 160201353 - 116889905 MODEL JAAIVD010000025 pseudo 626159667 Pygb glycogen phosphorylase B ENCODES a protein that exhibits carbohydrate binding (ortholog); glycogen phosphorylase activity (ortholog); identical protein binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); PARTICIPATES IN glycogen degradation pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); Dwarfism (ortholog); Myocardial Ischemia (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog) 5 130494177 130543505 + 22301074;30032202 116902098 MODEL JAAIVD010000023;XM_032904400 XP_032760291 glycogen phosphorylase, brain form protein-coding 626159691 LOC116903825 influenza virus NS1A-binding protein homolog 6 19389350 19393682 + 116903825 MODEL JAAIVD010000024 pseudo 626159692 Cryba2 crystallin beta A2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN lens development in camera-type eye (ortholog); ASSOCIATED WITH cataract (ortholog); cataract 42 (ortholog) 4 148309541 148312786 - 30032202 116898233 MODEL JAAIVD010000003;XM_032899586 XP_032755477 beta-crystallin A2 protein-coding 626159701 LOC116890162 keratin, type II cytoskeletal 74-like 1 261309604 261316191 + 116890162 MODEL JAAIVD010000025 pseudo 626159702 LOC116899749 U6 spliceosomal RNA 4 174476729 174476835 + 116899749 MODEL JAAIVD010000003;XR_004387764 snrna 626159705 LOC116911083 sodium/potassium-transporting ATPase subunit alpha-4 10 51335535 51371203 - 22301074;30032202 116911083 MODEL JAAIVD010000005;XM_032914868;XM_032914869 XP_032770759;XP_032770760 protein-coding 626159734 Dvl2 dishevelled segment polarity protein 2 ENCODES a protein that exhibits frizzled binding (ortholog); identical protein binding (ortholog); protein domain specific binding (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); cochlea morphogenesis (ortholog); convergent extension involved in neural plate elongation (ortholog); PARTICIPATES IN Wnt signaling pathway; Wnt signaling, canonical pathway; Wnt signaling, non-canonical pathway; ASSOCIATED WITH dextro-looped transposition of the great arteries (ortholog); FOUND IN aggresome (ortholog); apical part of cell (ortholog); clathrin-coated vesicle (ortholog) 9 49607576 49616703 + 22301074;30032202 116910246 MODEL JAAIVD010000002;XM_032914135;XM_032914136 XP_032770026;XP_032770027 segment polarity protein dishevelled homolog DVL-2 protein-coding 626159756 Kirrel1 kirre like nephrin family adhesion molecule 1 ENCODES a protein that exhibits myosin binding (ortholog); INVOLVED IN cell-cell adhesion (ortholog); cell-cell junction maintenance (ortholog); glomerular filtration (ortholog); ASSOCIATED WITH nephrotic syndrome type 23 (ortholog); FOUND IN cell projection membrane (ortholog); cell-cell junction (ortholog); dendritic shaft (ortholog) 3 66396787 66485326 + 30032202 116896722 MODEL JAAIVD010000012;XM_032898141 XP_032754032 kin of IRRE-like protein 1 protein-coding 626159776 LOC116906953 olfactory receptor 143-like 8 32076509 32077450 + 22301074;30032202 116906953 MODEL JAAIVD010000027;XM_032909874 XP_032765765 protein-coding 626159779 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41357882 41357953 + 116884155 MODEL JAAIVD010000009 trna 626159780 LOC116894338 myoblast determination protein 1-like 2 153116529 153118432 - 22301074;30032202 116894338 MODEL JAAIVD010000001;XM_032896034 XP_032751925 protein-coding 626159786 LOC116908883 keratin-associated protein 4-12-like 9 54470509 54471030 - 22301074;30032202 116908883 MODEL JAAIVD010000002;XM_032912328;XM_032912329 XP_032768219;XP_032768220 protein-coding 626159793 Cstf1 cleavage stimulation factor subunit 1 PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN nucleoplasm (ortholog) 5 145615208 145626808 - 22301074;30032202 116902286 MODEL JAAIVD010000023;XM_032904717;XM_032904718;XM_032904719;XM_032904720;XM_032904721;XM_032904722 XP_032760608;XP_032760609;XP_032760610;XP_032760611;XP_032760612;XP_032760613 protein-coding 626159819 LOC116897408 U6 spliceosomal RNA 3 137408859 137408965 - 116897408 MODEL JAAIVD010000012;XR_004387451 snrna 626159822 LOC116890460 small Cajal body-specific RNA 8 1 67403546 67403676 + 116890460 MODEL JAAIVD010000025;XR_004386652 ncrna 626159825 Pif1 PIF1 5'-to-3' DNA helicase ENCODES a protein that exhibits 5'-3' DNA helicase activity (ortholog); 5'-3' DNA/RNA helicase activity (ortholog); ATP binding (ortholog); INVOLVED IN negative regulation of telomere maintenance via telomerase (ortholog); protein-DNA-RNA complex disassembly (ortholog); ASSOCIATED WITH Habitual Abortions (ortholog); FOUND IN chromosome, telomeric region (ortholog); mitochondrial nucleoid (ortholog); mitochondrion (ortholog) 8 59902528 59910083 + 22301074 116908003 MODEL JAAIVD010000027;XM_032911259;XM_032911260 XP_032767150;XP_032767151 ATP-dependent DNA helicase PIF1 protein-coding 626159847 Vegfa vascular endothelial growth factor A ENCODES a protein that exhibits chemoattractant activity (ortholog); cytokine activity (ortholog); extracellular matrix binding (ortholog); INVOLVED IN angiogenesis (ortholog); angiogenesis involved in coronary vascular morphogenesis (ortholog); artery morphogenesis (ortholog); PARTICIPATES IN altered vascular endothelial growth factor signaling pathway involving proteins affecting its expression; altered vascular endothelial growth factor signaling pathway involving the main players; bevacizumab pharmacodynamics pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acute chest syndrome (ortholog); acute kidney failure (ortholog); FOUND IN adherens junction (ortholog); basement membrane (ortholog); cell surface (ortholog) 4 83839276 83854678 + 22301074;30032202 116899125 MODEL JAAIVD010000003;XM_032900650;XM_032900651;XM_032900652;XM_032900653;XM_032900654;XM_032900655 XP_032756541;XP_032756542;XP_032756543;XP_032756544;XP_032756545;XP_032756546 protein-coding 626159874 Mien1 migration and invasion enhancer 1 INVOLVED IN negative regulation of apoptotic process (ortholog); positive regulation of cell migration (ortholog); positive regulation of filopodium assembly (ortholog); FOUND IN cytoplasmic side of plasma membrane (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 55957192 55958496 + 30032202 116908697 MODEL JAAIVD010000002;XM_032912021 XP_032767912 protein-coding 626159882 Scd5 stearoyl-CoA desaturase 5 ENCODES a protein that exhibits oxidoreductase activity (ortholog); palmitoyl-CoA 9-desaturase activity (ortholog); stearoyl-CoA 9-desaturase activity (ortholog); INVOLVED IN monounsaturated fatty acid biosynthetic process (ortholog); unsaturated fatty acid biosynthetic process (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 79 (ortholog); pneumoconiosis (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 11 10450144 10494485 - 30032202 116912667 MODEL JAAIVD010000006;XM_032916785 XP_032772676 protein-coding 626159891 Vsx2 visual system homeobox 2 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN camera-type eye development (ortholog); cell fate commitment (ortholog); central nervous system neuron differentiation (ortholog); ASSOCIATED WITH Anophthalmia (ortholog); blindness (ortholog); genetic disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 7 98679130 98702717 + 22301074;30032202 116905274 MODEL JAAIVD010000026;XM_032908133;XM_032908134 XP_032764024;XP_032764025 protein-coding 626159904 Fbxo45 F-box protein 45 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN anterior commissure morphogenesis (ortholog); cerebral cortex radially oriented cell migration (ortholog); cerebral cortex tangential migration (ortholog); FOUND IN cytosol (ortholog); glutamatergic synapse (ortholog); nucleoplasm (ortholog) 4 17043852 17059871 - 22301074;30032202 116898770 MODEL JAAIVD010000003;XM_032900106 XP_032755997 F-box/SPRY domain-containing protein 1 protein-coding 626159911 Wdr41 WD repeat domain 41 ENCODES a protein that exhibits GTPase activator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); INVOLVED IN regulation of autophagy (ortholog); FOUND IN cytoplasm (ortholog); guanyl-nucleotide exchange factor complex (ortholog) 3 201315681 201368102 - 22301074;30032202 116897283 MODEL JAAIVD010000012;XM_032899015 XP_032754906 WD repeat-containing protein 41 protein-coding 626159929 LOC116890409 U6 spliceosomal RNA 1 208225446 208225555 + 116890409 MODEL JAAIVD010000025;XR_004386611 snrna 626159932 Rbpms2 RNA binding protein, mRNA processing factor 2 ENCODES a protein that exhibits identical protein binding (ortholog); mRNA binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of smooth muscle cell differentiation (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 8 59943508 59972354 + 22301074;30032202 116906802 MODEL JAAIVD010000027;XM_032909676 XP_032765567 RNA-binding protein with multiple splicing 2 protein-coding 626159944 LOC116913217 40S ribosomal protein S15-like 12 69393510 69394486 - 116913217 MODEL JAAIVD010000007 pseudo 626159945 Kiaa2013 KIAA2013 ortholog 1 12828309 12834546 - 116892921 MODEL JAAIVD010000025;XM_032894851 XP_032750742 uncharacterized protein KIAA2013 homolog protein-coding 626159952 LOC116912043 lactoylglutathione lyase-like 11 83253616 83261582 + 116912043 MODEL JAAIVD010000006 pseudo 626159953 LOC116885845 CD209 antigen-like protein C 16 2104070 2110748 + 116885845 MODEL JAAIVD010000004;XM_032887184 XP_032743075 protein-coding 626159961 LOC116889916 olfactory receptor 6C2 1 160575613 160576551 + 22301074;30032202 116889916 MODEL JAAIVD010000025;XM_032890734 XP_032746625 protein-coding 626159964 Ppt1 palmitoyl-protein thioesterase 1 ENCODES a protein that exhibits lysophosphatidic acid binding (ortholog); palmitoyl-(protein) hydrolase activity (ortholog); phospholipase A2 inhibitor activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); associative learning (ortholog); brain development (ortholog); PARTICIPATES IN fatty acid elongation pathway; ASSOCIATED WITH congenital myopathy 1A (ortholog); COVID-19 (ortholog); disease of cellular proliferation (ortholog); FOUND IN axon (ortholog); dendrite (ortholog); extracellular region (ortholog) 1 35392513 35413027 - 30032202 116897192 MODEL JAAIVD010000025;XM_032898893 XP_032754784 protein-coding 626159977 Mthfd2l methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2 like ENCODES a protein that exhibits methenyltetrahydrofolate cyclohydrolase activity (ortholog); methylenetetrahydrofolate dehydrogenase (NAD+) activity (ortholog); methylenetetrahydrofolate dehydrogenase (NADP+) activity (ortholog); INVOLVED IN 10-formyltetrahydrofolate metabolic process (ortholog); tetrahydrofolate interconversion (ortholog); PARTICIPATES IN folate cycle metabolic pathway; FOUND IN mitochondrial inner membrane (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 11 4341141 4427140 + 22301074;30032202 116912625 MODEL JAAIVD010000006;XM_032916743 XP_032772634 probable bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase 2 protein-coding 626159989 LOC116910515 uncharacterized LOC116910515 9 33978446 33979654 - 116910515 MODEL JAAIVD010000002;XR_004389157 ncrna 626159994 LOC116902953 vomeronasal type-1 receptor 100-like 6 124202761 124203759 + 22301074;30032202 116902953 MODEL JAAIVD010000024;XM_032905278 XP_032761169 protein-coding 626159998 Tgm3 transglutaminase 3 ENCODES a protein that exhibits calcium ion binding (ortholog); catalytic activity (ortholog); protein-glutamine gamma-glutamyltransferase activity (ortholog); INVOLVED IN keratinocyte differentiation (ortholog); peptide cross-linking (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); Uncombable Hair Syndrome (ortholog); Uncombable Hair Syndrome 2 (ortholog); FOUND IN cytoplasm (ortholog); extrinsic component of cytoplasmic side of plasma membrane (ortholog); protein-containing complex (ortholog) 5 108744576 108779829 + 22301074;30032202 116900629 MODEL JAAIVD010000023;XM_032902345 XP_032758236 protein-glutamine gamma-glutamyltransferase E protein-coding 626160015 Coq8b coenzyme Q8B ENCODES a protein that exhibits protein kinase activity (ortholog); INVOLVED IN cerebellar Purkinje cell layer morphogenesis (ortholog); protein phosphorylation (ortholog); ubiquinone biosynthetic process (ortholog); ASSOCIATED WITH focal segmental glomerulosclerosis (ortholog); genetic disease (ortholog); kidney disease (ortholog); FOUND IN mitochondrion (ortholog) 2 168687804 168710978 - 30032202 116892437 MODEL JAAIVD010000001;XM_032894126;XM_032894127 XP_032750017;XP_032750018 atypical kinase COQ8B, mitochondrial protein-coding 626160039 Enpp5 ectonucleotide pyrophosphatase/phosphodiesterase family member 5 ENCODES a protein that exhibits NAD+ diphosphatase activity (ortholog); zinc ion binding (ortholog); INVOLVED IN cell communication (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Prostatic Neoplasms (ortholog); FOUND IN plasma membrane (ortholog) 4 85780424 85787271 - 116899144 MODEL JAAIVD010000003;XM_032900685 XP_032756576 protein-coding 626160047 Tshz1 teashirt zinc finger homeobox 1 INVOLVED IN anterior/posterior pattern specification (ortholog); middle ear morphogenesis (ortholog); soft palate development (ortholog); ASSOCIATED WITH Congenital Aural Atresia (ortholog); Familial Prostate Cancer (ortholog) 15 48280711 48355778 + 22301074;30032202 116884377 MODEL JAAIVD010000010;XM_032885494 XP_032741385 teashirt homolog 1 protein-coding 626160053 LOC116898425 putative sperm motility kinase W 4 90746129 90747469 + 116898425 MODEL JAAIVD010000003 pseudo 626160054 LOC116907201 PMS1 protein homolog 1-like 8 4307038 4327119 - 116907201 MODEL JAAIVD010000027 pseudo 626160055 LOC116889112 60S ribosomal protein L39-like X 57815521 57815677 - 116889112 MODEL JAAIVD010000014 pseudo 626160056 Ptpn18 protein tyrosine phosphatase non-receptor type 18 ENCODES a protein that exhibits non-membrane spanning protein tyrosine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN blastocyst formation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 4 110686990 110704698 + 30032202 116899276 MODEL JAAIVD010000003;XM_032900905 XP_032756796 tyrosine-protein phosphatase non-receptor type 18 protein-coding 626160075 Ly6g6d lymphocyte antigen 6 family member G6D ENCODES a protein that exhibits acetylcholine receptor inhibitor activity (ortholog); identical protein binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); FOUND IN external side of plasma membrane (ortholog); protein-containing complex (ortholog) 18 7668948 7671901 - 30032202 116887504 MODEL JAAIVD010000013;XM_032889122;XM_032889124 XP_032745013;XP_032745015 lymphocyte antigen 6 complex locus protein G6d protein-coding 626160088 LOC116897621 small nucleolar RNA SNORA26 3 23687368 23687488 + 116897621 MODEL JAAIVD010000012;XR_004387602 snorna 626160091 C5H20orf144 chromosome 5 C20orf144 homolog 5 133916104 133917810 + 116902162 MODEL JAAIVD010000023;XM_032904503 XP_032760394 uncharacterized protein C20orf144 homolog protein-coding 626160098 LOC116883471 cytochrome b-c1 complex subunit Rieske, mitochondrial ENCODES a protein that exhibits protein-containing complex binding (ortholog); INVOLVED IN mitochondrial respiratory chain complex III assembly (ortholog); respiratory electron transport chain (ortholog); response to hormone (ortholog); ASSOCIATED WITH cardiomyopathy (ortholog); Experimental Seizures (ortholog); lactic acidosis (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 14 49552041 49556679 - 22301074;30032202 116883471 MODEL JAAIVD010000009;XM_032884623 XP_032740514 protein-coding 626160104 Fhit fragile histidine triad diadenosine triphosphatase ENCODES a protein that exhibits adenosine 5'-monophosphoramidase activity (ortholog); adenylylsulfatase activity (ortholog); adenylylsulfate-ammonia adenylyltransferase activity (ortholog); INVOLVED IN diadenosine triphosphate catabolic process (ortholog); DNA replication (ortholog); intrinsic apoptotic signaling pathway by p53 class mediator (ortholog); ASSOCIATED WITH amenorrhea (ortholog); amphetamine abuse (ortholog); autistic disorder (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); fibrillar center (ortholog) 12 79846288 80106818 - 30032202 116914022 MODEL JAAIVD010000007;XM_032918289 XP_032774180 bis(5'-adenosyl)-triphosphatase protein-coding 626160112 LOC116893746 forkhead box protein D4-like 2 25029262 25030668 - 30032202 116893746 MODEL JAAIVD010000001;XM_032895455 XP_032751346 protein-coding 626160116 Nono non-POU domain containing octamer binding ENCODES a protein that exhibits chromatin binding (ortholog); identical protein binding (ortholog); lncRNA binding (ortholog); INVOLVED IN activation of innate immune response (ortholog); cellular response to angiotensin (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH abdominal aortic aneurysm (ortholog); aortic dissection (ortholog); atherosclerosis (ortholog); FOUND IN fibrillar center (ortholog); nuclear matrix (ortholog); nucleoplasm (ortholog) X 59099831 59117184 - 22301074;30032202 116888571 MODEL JAAIVD010000014;XM_032889874 XP_032745765 non-POU domain-containing octamer-binding protein protein-coding 626160131 LOC116905596 myeloblastin 1 154988909 154992497 - 22301074;30032202 116905596 MODEL JAAIVD010000025;XM_032908599 XP_032764490 protein-coding 626160140 LOC116911897 14-3-3 protein gamma-like 1 167173384 167174030 - 116911897 MODEL JAAIVD010000025 pseudo 626160141 LOC116914011 myosin-7-like 12 69997228 70018943 + 22301074 116914011 MODEL JAAIVD010000007;XM_032918284 XP_032774175 protein-coding 626160182 Foxa3 forkhead box A3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN cellular response to starvation (ortholog); hematopoietic stem cell homeostasis (ortholog); intracellular glucose homeostasis (ortholog); PARTICIPATES IN forkhead class A signaling pathway; ASSOCIATED WITH Experimental Diabetes Mellitus (ortholog); Prostatic Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 2 171599118 171608406 + 22301074;30032202 116892556 MODEL JAAIVD010000001;XM_032894335 XP_032750226 hepatocyte nuclear factor 3-gamma protein-coding 626160188 Zbtb46 zinc finger and BTB domain containing 46 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); transcription cis-regulatory region binding (ortholog); transcription coregulator activity (ortholog); INVOLVED IN negative regulation of dendritic cell differentiation (ortholog); negative regulation of granulocyte differentiation (ortholog); negative regulation of leukocyte activation (ortholog); ASSOCIATED WITH chronic recurrent multifocal osteomyelitis (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN chromatin (ortholog) 5 158482415 158551015 - 22301074;30032202 116902436 MODEL JAAIVD010000023;XM_032904973 XP_032760864 zinc finger and BTB domain-containing protein 46 protein-coding 626160197 Nop10 NOP10 ribonucleoprotein ENCODES a protein that exhibits box H/ACA snoRNA binding (ortholog); RNA binding (ortholog); telomerase RNA binding (ortholog); INVOLVED IN snoRNA guided rRNA pseudouridine synthesis (ortholog); telomerase RNA localization to Cajal body (ortholog); telomere maintenance via telomerase (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH Autosomal Recessive Dyskeratosis Congenita (ortholog); autosomal recessive dyskeratosis congenita 1 (ortholog); Cataracts, Hearing Impairment, Nephrotic Syndrome, and Enterocolitis 2 (ortholog); FOUND IN box H/ACA snoRNP complex (ortholog); box H/ACA telomerase RNP complex (ortholog); nuclear body (ortholog) 5 90587238 90587958 + 22301074;30032202 116901740 MODEL JAAIVD010000023;XM_032903876 XP_032759767 H/ACA ribonucleoprotein complex subunit 3 protein-coding 626160203 CXHXorf65 chromosome X CXorf65 homolog ENCODES a protein that exhibits RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN gene expression (ortholog); transcription by RNA polymerase II (ortholog) X 59279242 59281609 + 116888263 MODEL JAAIVD010000014;XM_032889542 XP_032745433 uncharacterized protein CXorf65 homolog protein-coding 626160211 Eno4 enolase 4 ENCODES a protein that exhibits phosphopyruvate hydratase activity (ortholog); INVOLVED IN cilium organization (ortholog); flagellated sperm motility (ortholog); glycolytic process (ortholog); ASSOCIATED WITH male infertility (ortholog); FOUND IN sperm principal piece (ortholog) 2 57144935 57167813 - 30032202 116891318 MODEL JAAIVD010000001;XM_032892235;XM_032892236 XP_032748126;XP_032748127 protein-coding 626160232 LOC116894406 ribosomal oxygenase 2-like 2 158268730 158269508 - 116894406 MODEL JAAIVD010000001 pseudo 626160233 E4f1 E4F transcription factor 1 ENCODES a protein that exhibits cAMP response element binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN DNA replication (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH Neoplastic Cell Transformation (ortholog); pyruvate decarboxylase deficiency (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 9 1730572 1745580 - 30032202 116910466 MODEL JAAIVD010000002;XM_032914336;XM_032914337;XM_032914338 XP_032770227;XP_032770228;XP_032770229 transcription factor E4F1 protein-coding 626160262 LOC116912828 ubiquitin-conjugating enzyme E2 D2B 11 17635598 17637246 + 30032202 116912828 MODEL JAAIVD010000006;XM_032917017 XP_032772908 protein-coding 626160267 LOC116913341 uncharacterized LOC116913341 12 54773590 54799999 + 116913341 MODEL JAAIVD010000007;XR_004389607 ncrna 626160273 LOC116883737 trophoblast-specific protein alpha-like 14 77271477 77273854 + 116883737 MODEL JAAIVD010000009;XM_032884968 XP_032740859 protein-coding 626160282 LOC116885051 U2 spliceosomal RNA 15 2325927 2326035 - 116885051 MODEL JAAIVD010000010 pseudo 626160283 LOC116895529 late cornified envelope protein 3D-like 3 120321512 120321808 + 22301074 116895529 MODEL JAAIVD010000012;XM_032896774 XP_032752665 protein-coding 626160286 Msgn1 mesogenin 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN segment specification (ortholog); somitogenesis (ortholog); ASSOCIATED WITH renal cell carcinoma (ortholog) 7 31191507 31192135 - 22301074;30032202 116904875 MODEL JAAIVD010000026;XM_032907472 XP_032763363 mesogenin-1 protein-coding 626160291 Defb1 defensin beta 1 ENCODES a protein that exhibits CCR6 chemokine receptor binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); calcium-mediated signaling (ortholog); defense response to bacterium (ortholog); ASSOCIATED WITH Actinobacillus Infections (ortholog); asthma (ortholog); chronic obstructive pulmonary disease (ortholog); FOUND IN extracellular space (ortholog); membrane (ortholog); microvesicle (ortholog) 13 65072170 65075261 + 22301074;30032202 116914507 MODEL JAAIVD010000008;XM_032918829 XP_032774720 beta-defensin 1 protein-coding 626160295 LOC116902882 anionic trypsin-2 6 99202421 99207389 - 22301074;30032202 116902882 MODEL JAAIVD010000024;XM_032905213;XM_032905214 XP_032761104;XP_032761105 protein-coding 626160307 Armc7 armadillo repeat containing 7 9 68601966 68615546 - 22301074 116909645 MODEL JAAIVD010000002;XM_032913290;XM_032913291;XM_032913292;XM_032913293 XP_032769181;XP_032769182;XP_032769183;XP_032769184 armadillo repeat-containing protein 7 protein-coding 626160323 LOC116899993 histone deacetylase complex subunit SAP18-like 5 3161260 3173869 - 116899993 MODEL JAAIVD010000023 pseudo 626160324 Mturn maturin, neural progenitor differentiation regulator homolog INVOLVED IN negative regulation of NF-kappaB transcription factor activity (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); positive regulation of JNK cascade (ortholog); FOUND IN cytoplasm (ortholog) 6 86366401 86384290 - 30032202 116903766 MODEL JAAIVD010000024;XM_032906456 XP_032762347 maturin protein-coding 626160331 LOC116897976 stress-induced-phosphoprotein 1-like 4 22037182 22038848 + 116897976 MODEL JAAIVD010000003;XR_004387631 pseudo 626160334 Rpl27a ribosomal protein L27a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); cerebellar ataxia (ortholog); Hyperpigmentation (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) 2 91960614 91962993 - 22301074;30032202 116891679 MODEL JAAIVD010000001;X52733;XM_032892938 CAA36947;XP_032748829 60S ribosomal protein L27a protein-coding 626160343 LOC116897262 uncharacterized LOC116897262 3 198451309 198455524 + 116897262 MODEL JAAIVD010000012;XR_004387407 ncrna 626160347 Hadha hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit alpha ENCODES a protein that exhibits (3S)-3-hydroxyacyl-CoA dehydrogenase (NAD+) activity (ortholog); 3-hydroxyacyl-CoA dehydratase activity (ortholog); acetyl-CoA C-acyltransferase activity (ortholog); INVOLVED IN cardiolipin acyl-chain remodeling (ortholog); fatty acid beta-oxidation (ortholog); response to insulin (ortholog); PARTICIPATES IN carnitine palmitoyltransferase I deficiency pathway; ethylmalonic encephalopathy pathway; fatty acid beta degradation pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); COVID-19 (ortholog); FOUND IN mitochondrial fatty acid beta-oxidation multienzyme complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial nucleoid (ortholog) 7 23883308 23918332 + 22301074;30032202 116906011 MODEL JAAIVD010000026;XM_032909051 XP_032764942 trifunctional enzyme subunit alpha, mitochondrial protein-coding 626160371 Abhd5 abhydrolase domain containing 5, lysophosphatidic acid acyltransferase ENCODES a protein that exhibits 1-acylglycerol-3-phosphate O-acyltransferase activity (ortholog); lipase activator activity (ortholog); lysophosphatidic acid acyltransferase activity (ortholog); INVOLVED IN lipid metabolic process (ortholog); phosphatidic acid biosynthetic process (ortholog); positive regulation of lipid catabolic process (ortholog); ASSOCIATED WITH autosomal recessive congenital ichthyosis 1 (ortholog); Chanarin-Dorfman syndrome (ortholog); colon adenocarcinoma (ortholog); FOUND IN cytosol (ortholog); lipid droplet (ortholog); nucleoplasm (ortholog) 8 113494249 113526763 + 30032202 116907996 MODEL JAAIVD010000027;XM_032911249;XM_032911251;XM_032911252 XP_032767140;XP_032767142;XP_032767143 1-acylglycerol-3-phosphate O-acyltransferase ABHD5 protein-coding 626160388 Cldn3 claudin 3 ENCODES a protein that exhibits cell-cell adhesion mediator activity (ortholog); identical protein binding (ortholog); structural molecule activity (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); bicellular tight junction assembly (ortholog); calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules (ortholog); ASSOCIATED WITH allergic rhinitis (ortholog); autism spectrum disorder (ortholog); Intestinal Reperfusion Injury (ortholog); FOUND IN apical junction complex (ortholog); apicolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 16 19056630 19058195 - 22301074;30032202 116885745 MODEL JAAIVD010000004;XM_032887053 XP_032742944 claudin-3 protein-coding 626160393 Chrm3 cholinergic receptor muscarinic 3 ENCODES a protein that exhibits acetylcholine binding (ortholog); G protein-coupled acetylcholine receptor activity (ortholog); G protein-coupled acetylcholine receptor binding (ortholog); INVOLVED IN acetylcholine receptor signaling pathway (ortholog); calcium-mediated signaling (ortholog); G protein-coupled acetylcholine receptor signaling pathway (ortholog); PARTICIPATES IN acetylcholine signaling pathway via muscarinic acetylcholine receptors engaging G alphaq protein family; cimetidine pharmacodynamics pathway; esomeprazole pharmacodynamics pathway; ASSOCIATED WITH Ascites (ortholog); asthma (ortholog); bladder disease (ortholog); FOUND IN asymmetric synapse (ortholog); axon terminus (ortholog); basal plasma membrane (ortholog) 14 23513480 23961265 - 22301074;30032202 116883841 MODEL JAAIVD010000009;XM_032885103;XM_032885104;XM_032885105;XM_032885106;XR_004385797 XP_032740994;XP_032740995;XP_032740996;XP_032740997 muscarinic acetylcholine receptor M3 protein-coding 626160411 LOC116906780 olfactory receptor 8B3-like 8 32144149 32145084 + 22301074;30032202 116906780 MODEL JAAIVD010000027;XM_032909631 XP_032765522 protein-coding 626160415 LOC116887657 40S ribosomal protein S24-like 18 25469859 25486338 + 116887657 MODEL JAAIVD010000013 pseudo 626160416 Il18rap interleukin 18 receptor accessory protein ENCODES a protein that exhibits coreceptor activity (ortholog); interleukin-18 receptor activity (ortholog); INVOLVED IN cell population proliferation (ortholog); cellular response to cytokine stimulus (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-23 signaling pathway; ASSOCIATED WITH aortic dissection (ortholog); Bronchial Hyperreactivity (ortholog); inflammatory bowel disease (ortholog); FOUND IN interleukin-18 receptor complex (ortholog) 4 116749415 116771374 + 30032202 116898152 MODEL JAAIVD010000003;XM_032899530;XM_032899531 XP_032755421;XP_032755422 interleukin-18 receptor accessory protein protein-coding 626160432 Greb1l GREB1 like retinoic acid receptor coactivator INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); cardiac muscle cell differentiation (ortholog); cardiac ventricle development (ortholog); ASSOCIATED WITH autosomal dominant nonsyndromic deafness 80 (ortholog); branchiootic syndrome (ortholog); CAKUT (ortholog) 15 33562628 33801320 - 30032202 116884560 MODEL JAAIVD010000010;XM_032885701 XP_032741592 GREB1-like protein protein-coding 626160469 Pofut1 protein O-fucosyltransferase 1 ENCODES a protein that exhibits peptide-O-fucosyltransferase activity (ortholog); INVOLVED IN angiogenesis (ortholog); heart development (ortholog); nervous system development (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH Dowling-Degos disease (ortholog); Dowling-Degos Disease 2 (ortholog); genetic disease (ortholog); FOUND IN endoplasmic reticulum (ortholog); membrane (ortholog) 5 132557944 132584339 + 22301074;30032202 116902141 MODEL JAAIVD010000023;XM_032904468;XM_032904469 XP_032760359;XP_032760360 GDP-fucose protein O-fucosyltransferase 1 protein-coding 626160483 LOC116894381 olfactory receptor 13A1-like 2 156731004 156731954 + 22301074 116894381 MODEL JAAIVD010000001;XM_032896089 XP_032751980 protein-coding 626160487 Arf4 ARF GTPase 4 ENCODES a protein that exhibits epidermal growth factor receptor binding (ortholog); GTP binding (ortholog); NAD+-protein-arginine ADP-ribosyltransferase activity (ortholog); INVOLVED IN apical protein localization (ortholog); cell migration (ortholog); dendritic spine development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); dendritic spine (ortholog) 13 2441614 2458284 + 22301074;30032202 116914808 MODEL JAAIVD010000008;XM_032919262 XP_032775153 ADP ribosylation factor 4;ADP-ribosylation factor 4 protein-coding 626160497 LOC116896620 glyceraldehyde-3-phosphate dehydrogenase-like 3 63506059 63507052 + 116896620 MODEL JAAIVD010000012 pseudo 626160498 Gabrq gamma-aminobutyric acid type A receptor subunit theta ENCODES a protein that exhibits GABA-A receptor activity (ortholog); GABA-gated chloride ion channel activity (ortholog); FOUND IN receptor complex (ortholog) X 129530308 129543375 - 22301074;30032202 116888871 MODEL JAAIVD010000014;XM_032890135 XP_032746026 gamma-aminobutyric acid receptor subunit theta protein-coding 626160512 Chat choline O-acetyltransferase ENCODES a protein that exhibits choline binding (ortholog); choline O-acetyltransferase activity (ortholog); INVOLVED IN acetylcholine biosynthetic process (ortholog); adult walking behavior (ortholog); antral ovarian follicle growth (ortholog); PARTICIPATES IN acetylcholine metabolic pathway; acetylcholine signaling pathway via muscarinic acetylcholine receptor; acetylcholine signaling pathway via nicotinic acetylcholine receptor; ASSOCIATED WITH alcohol dependence (ortholog); Alzheimer's disease (ortholog); angle-closure glaucoma (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); neuron projection (ortholog) 13 8118123 8169324 - 30032202 116914875 MODEL JAAIVD010000008;XM_032919318 XP_032775209 protein-coding 626160529 LOC116905813 acyl-coenzyme A thioesterase 6-like 7 98184875 98193908 + 22301074;30032202 116905813 MODEL JAAIVD010000026;XM_032908783 XP_032764674 protein-coding 626160536 LOC116891798 hemoglobin subunit beta-2 2 101823012 101824309 + 22301074;30032202 116891798 MODEL JAAIVD010000001;XM_032893152 XP_032749043 protein-coding 626160543 LOC116898499 coiled-coil domain-containing protein 126-like 4 124971614 124972215 - 116898499 MODEL JAAIVD010000003 pseudo 626160544 LOC116897791 olfactory receptor 2L13-like 4 4443557 4444495 + 22301074 116897791 MODEL JAAIVD010000003;XM_032899211 XP_032755102 protein-coding 626160547 LOC116884767 uncharacterized LOC116884767 15 51249365 51252161 - 116884767 MODEL JAAIVD010000010;XR_004385892;XR_004385893 ncrna 626160556 Foxn3 forkhead box N3 INVOLVED IN craniofacial suture morphogenesis (ortholog); mitotic G2 DNA damage checkpoint signaling (ortholog); negative regulation of DNA-templated transcription (ortholog) 7 112347927 112723101 - 22301074;30032202 116905350 MODEL JAAIVD010000026;XM_032908256;XM_032908257;XM_032908258;XM_032908259;XM_032908260;XM_032908261;XM_032908262;XM_032908263;XM_032908265 XP_032764147;XP_032764148;XP_032764149;XP_032764150;XP_032764151;XP_032764152;XP_032764153;XP_032764154;XP_032764156 forkhead box protein N3 protein-coding 626160592 LOC116902997 mitochondrial import inner membrane translocase subunit Tim8 A-like 6 141562298 141562581 - 116902997 MODEL JAAIVD010000024 pseudo 626160593 Adgrb2 adhesion G protein-coupled receptor B2 ENCODES a protein that exhibits G protein-coupled receptor activity (ortholog); INVOLVED IN calcineurin-NFAT signaling cascade (ortholog); G protein-coupled receptor signaling pathway (ortholog); peripheral nervous system development (ortholog); ASSOCIATED WITH COVID-19 (ortholog); hereditary spastic paraplegia (ortholog); Spastic Paraparesis (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); synapse (ortholog) 1 28131926 28194910 - 22301074 116895997 MODEL JAAIVD010000025;XM_032897024 XP_032752915 protein-coding 626160627 LOC116885910 40S ribosomal protein S11-like 16 18127173 18131678 - 116885910 MODEL JAAIVD010000004 pseudo 626160628 Glis3 GLIS family zinc finger 3 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); transcription by RNA polymerase II (ortholog); ASSOCIATED WITH angle-closure glaucoma (ortholog); aniridia (ortholog); diabetes mellitus (ortholog); FOUND IN nucleus (ortholog) 2 28324719 28740502 - 30032202 116891063 MODEL JAAIVD010000001;XM_032891769 XP_032747660 zinc finger protein GLIS3 protein-coding 626160643 Tjp2 tight junction protein 2 ENCODES a protein that exhibits protein domain specific binding (ortholog); protein tyrosine kinase binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN establishment of endothelial intestinal barrier (ortholog); homotypic cell-cell adhesion (ortholog); intestinal absorption (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 51 (ortholog); branchiootorenal syndrome (ortholog); FOUND IN bicellular tight junction (ortholog); cell junction (ortholog); cell surface (ortholog) 2 24212230 24290329 - 22301074;30032202 116891045 MODEL JAAIVD010000001;XM_032891732;XM_032891733;XM_032891734;XM_032891735 XP_032747623;XP_032747624;XP_032747625;XP_032747626 tight junction protein ZO-2 protein-coding 626160679 LOC116891799 hemoglobin subunit beta-2 2 101829679 101831006 + 22301074;30032202 116891799 MODEL JAAIVD010000001;XM_032893153 XP_032749044 protein-coding 626160686 LOC116896929 uncharacterized LOC116896929 3 117461698 117467873 + 116896929 MODEL JAAIVD010000012;XR_004387379 ncrna 626160690 Lrch2 leucine rich repeats and calponin homology domain containing 2 ASSOCIATED WITH cerebellar ataxia (ortholog) X 97699865 97769453 + 22301074 116888710 MODEL JAAIVD010000014;XM_032889999 XP_032745890 leucine-rich repeat and calponin homology domain-containing protein 2 protein-coding 626160709 LOC116910107 60S ribosomal protein L9-like 9 95877650 95878224 + 116910107 MODEL JAAIVD010000002 pseudo 626160710 Parp3 poly(ADP-ribose) polymerase family member 3 ENCODES a protein that exhibits NAD DNA ADP-ribosyltransferase activity (ortholog); NAD+ poly-ADP-ribosyltransferase activity (ortholog); NAD+-protein mono-ADP-ribosyltransferase activity (ortholog); INVOLVED IN DNA ADP-ribosylation (ortholog); double-strand break repair (ortholog); double-strand break repair via nonhomologous end joining (ortholog); PARTICIPATES IN ADP-ribosylation pathway, mono and poly-ribosylation; FOUND IN intercellular bridge (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 8 97770570 97775725 - 22301074;30032202 116907492 MODEL JAAIVD010000027;XM_032910484 XP_032766375 protein mono-ADP-ribosyltransferase PARP3 protein-coding 626160724 LOC116889424 U6 spliceosomal RNA X 102548069 102548175 + 116889424 MODEL JAAIVD010000014;XR_004386389 snrna 626160727 LOC116886642 vomeronasal type-1 receptor 4-like 17 19572526 19576170 + 116886642 MODEL JAAIVD010000011 pseudo 626160728 LOC116887505 lymphocyte antigen 6G6e-like 18 7674530 7676375 + 22301074;30032202 116887505 MODEL JAAIVD010000013;XM_032889125 XP_032745016 protein-coding 626160735 LOC116910918 olfactory receptor 10J3-like 10 52197006 52216716 + 116910918 MODEL JAAIVD010000005 pseudo 626160736 Tstd3 thiosulfate sulfurtransferase like domain containing 3 1 121573833 121582956 + 30032202 116902936 MODEL JAAIVD010000025;XM_032905265 XP_032761156 thiosulfate sulfurtransferase/rhodanese-like domain-containing protein 3 protein-coding 626160744 Elovl5 ELOVL fatty acid elongase 5 ENCODES a protein that exhibits fatty acid elongase activity (ortholog); INVOLVED IN alpha-linolenic acid metabolic process (ortholog); fatty acid biosynthetic process (ortholog); fatty acid derivative biosynthetic process (ortholog); PARTICIPATES IN alpha-linolenic acid metabolic pathway; linoleic acid metabolic pathway; ASSOCIATED WITH atherosclerosis (ortholog); Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); FOUND IN dendritic tree (ortholog); endoplasmic reticulum (ortholog); endoplasmic reticulum membrane (ortholog) 8 72157118 72221292 + 22301074;30032202 116906647 MODEL JAAIVD010000027;XM_032909424 XP_032765315 elongation of very long chain fatty acids protein 5 protein-coding 626160756 Rnf43 ring finger protein 43 ENCODES a protein that exhibits frizzled binding (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN negative regulation of Wnt signaling pathway (ortholog); protein ubiquitination (ortholog); stem cell proliferation (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH ascending colon cancer (ortholog); cholangiocarcinoma (ortholog); colon cancer (ortholog); FOUND IN plasma membrane (ortholog) 9 83062792 83136020 - 30032202 116908648 MODEL JAAIVD010000002;XM_032911914 XP_032767805 E3 ubiquitin-protein ligase RNF43 protein-coding 626160769 Fbxo28 F-box protein 28 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH developmental and epileptic encephalopathy 100 (ortholog); gastrointestinal stromal tumor (ortholog); genetic disease (ortholog); FOUND IN kinetochore (ortholog) 10 60603950 60629349 - 22301074;30032202 116910854 MODEL JAAIVD010000005;XM_032914613 XP_032770504 F-box only protein 28 protein-coding 626160778 LOC116908335 U6 spliceosomal RNA 8 54114188 54114280 - 116908335 MODEL JAAIVD010000027 pseudo 626160779 Tcta T cell leukemia translocation altered INVOLVED IN negative regulation of osteoclast differentiation (ortholog); osteoclast fusion (ortholog) 8 99630696 99633931 - 116907580 MODEL JAAIVD010000027;XM_032910618;XM_032910619 XP_032766509;XP_032766510 T-cell leukemia translocation-altered gene protein protein-coding 626160788 Mpz myelin protein zero INVOLVED IN cell aggregation (ortholog); cell-cell adhesion via plasma-membrane adhesion molecules (ortholog); cell-cell junction maintenance (ortholog); ASSOCIATED WITH atrophic muscular disease (ortholog); autosomal dominant distal hereditary motor neuronopathy 14 (ortholog); autosomal dominant distal hereditary motor neuronopathy 2 (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 10 50316357 50322011 + 22301074;30032202 116911310 MODEL JAAIVD010000005;XM_032915226 XP_032771117 myelin protein P0 protein-coding 626160798 LOC116900564 olfactory receptor 4F3/4F16/4F29-like 5 90178308 90179252 + 22301074 116900564 MODEL JAAIVD010000023;XM_032902289 XP_032758180 protein-coding 626160801 LOC116914337 eukaryotic translation initiation factor 2 subunit 1-like 13 49328224 49329307 - 22301074;30032202 116914337 MODEL JAAIVD010000008;XM_032918559 XP_032774450 protein-coding 626160804 Prrt1b proline rich transmembrane protein 1B 5 6980685 6986965 + 22301074;30032202 116900004 MODEL JAAIVD010000023;XM_032901809 XP_032757700 protein-coding 626160811 LOC116898303 TNF receptor-associated factor 4-like 4 30262548 30264070 - 116898303 MODEL JAAIVD010000003 pseudo 626160812 LOC116908356 small nucleolar RNA SNORA3/SNORA45 family 8 51402759 51402889 - 116908356 MODEL JAAIVD010000027;XR_004388906 snorna 626160815 LOC116900836 60S ribosomal protein L9-like 5 50242621 50261915 - 116900836 MODEL JAAIVD010000023 pseudo 626160816 LOC116910253 WW domain-binding protein 11-like 9 31565640 31567775 - 116910253 MODEL JAAIVD010000002 pseudo 626160817 LOC116888458 melanoma-associated antigen 1-like X 121270330 121272069 - 30032202 116888458 MODEL JAAIVD010000014;XM_032889738 XP_032745629 protein-coding 626160822 LOC116887395 uncharacterized LOC116887395 18 40404121 40407864 - 116887395 MODEL JAAIVD010000013;XR_004386210 ncrna 626160826 LOC116913991 60S ribosomal protein L36-like 12 56847760 56848086 - 22301074;30032202 116913991 MODEL JAAIVD010000007;XM_032918267 XP_032774158 protein-coding 626160829 LOC116906444 U1 spliceosomal RNA 7 49917740 49917903 + 116906444 MODEL JAAIVD010000026;XR_004388702 snrna 626160832 LOC116883422 cathepsin 8-like 14 77025760 77037396 + 30032202 116883422 MODEL JAAIVD010000009;XM_032884552 XP_032740443 protein-coding 626160841 LOC116890475 small nucleolar RNA SNORA2/SNORA34 family 1 271339581 271339716 - 116890475 MODEL JAAIVD010000025;XR_004386664 snorna 626160844 Arl9 ARF like GTPase 9 11 33749064 33756294 + 22301074 116912777 MODEL JAAIVD010000006;XM_032916935 XP_032772826 ADP ribosylation factor like GTPase 9;ADP-ribosylation factor-like protein 9 protein-coding 626160851 Olfm1 olfactomedin 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); INVOLVED IN negative regulation of amyloid-beta formation (ortholog); neuronal signal transduction (ortholog); positive regulation of apoptotic process (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); axon (ortholog); axonal growth cone (ortholog) 5 8436175 8473393 - 30032202 116901233 MODEL JAAIVD010000023;XM_032902975;XM_032902976;XM_032902977;XM_032902978 XP_032758866;XP_032758867;XP_032758868;XP_032758869 noelin protein-coding 626160872 Cacng1 calcium voltage-gated channel auxiliary subunit gamma 1 ENCODES a protein that exhibits calcium channel regulator activity (ortholog); voltage-gated calcium channel activity (ortholog); INVOLVED IN calcium ion transmembrane transport (ortholog); establishment of localization in cell (ortholog); regulation of calcium ion transmembrane transport via high voltage-gated calcium channel (ortholog); ASSOCIATED WITH malignant hyperthermia (ortholog); FOUND IN L-type voltage-gated calcium channel complex (ortholog) 9 71414805 71427755 + 22301074;30032202 116909664 MODEL JAAIVD010000002;XM_032913317 XP_032769208 voltage-dependent calcium channel gamma-1 subunit protein-coding 626160880 LOC116899396 uncharacterized LOC116899396 4 129879330 129884405 + 116899396 MODEL JAAIVD010000003;XR_004387726 ncrna 626160885 Eif4ebp2 eukaryotic translation initiation factor 4E binding protein 2 ENCODES a protein that exhibits eukaryotic initiation factor 4E binding (ortholog); translation repressor activity (ortholog); INVOLVED IN insulin receptor signaling pathway (ortholog); memory (ortholog); modulation of chemical synaptic transmission (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN neuronal ribonucleoprotein granule (ortholog); postsynapse (ortholog) 18 27268465 27285251 - 22301074;30032202 116886953 MODEL JAAIVD010000013;XM_032888453 XP_032744344 eukaryotic translation initiation factor 4E-binding protein 2 protein-coding 626160892 LOC116889989 proteasome subunit alpha type-4-like 1 174701076 174701775 - 116889989 MODEL JAAIVD010000025 pseudo 626160893 LOC116909477 olfactory receptor 2T29-like 9 39565236 39566192 + 22301074 116909477 MODEL JAAIVD010000002;XM_032913071 XP_032768962 protein-coding 626160896 LOC116913754 protein SET-like 12 26692280 26693072 + 116913754 MODEL JAAIVD010000007 pseudo 626160897 LOC116887877 eukaryotic translation initiation factor 4H-like X 48521539 48522524 - 116887877 MODEL JAAIVD010000014 pseudo 626160898 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41657008 41657081 + 116884207 MODEL JAAIVD010000009 trna 626160899 Fbxo16 F-box protein 16 12 59116171 59165345 - 22301074 116913715 MODEL JAAIVD010000007;XM_032918010;XM_032918011 XP_032773901;XP_032773902 F-box only protein 16 protein-coding 626160913 LOC116889904 olfactory receptor 6C6-like 1 160179375 160180315 + 116889904 MODEL JAAIVD010000025 pseudo 626160914 Pdhx pyruvate dehydrogenase complex component X ENCODES a protein that exhibits dihydrolipoyllysine-residue acetyltransferase activity (ortholog); INVOLVED IN pyruvate decarboxylation to acetyl-CoA (ortholog); PARTICIPATES IN pyruvate metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); intellectual disability (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN mitochondrion (ortholog); nucleoplasm (ortholog); plasma membrane (ortholog) 5 80856561 80910271 - 22301074;30032202 116901684 MODEL JAAIVD010000023;XM_032903807 XP_032759698 pyruvate dehydrogenase protein X component, mitochondrial protein-coding 626160929 Tent5d terminal nucleotidyltransferase 5D ENCODES a protein that exhibits poly(A) RNA polymerase activity (ortholog) X 6871959 6873440 - 22301074;30032202 116889266 MODEL JAAIVD010000014;XM_032890409 XP_032746300 protein-coding 626160933 Lypd4 LY6/PLAUR domain containing 4 INVOLVED IN binding of sperm to zona pellucida (ortholog); single fertilization (ortholog); sperm migration through the uterotubal junction (ortholog); FOUND IN acrosomal vesicle (ortholog) 2 169834582 169840170 + 30032202 116894484 MODEL JAAIVD010000001;XM_032896194 XP_032752085 ly6/PLAUR domain-containing protein 4 protein-coding 626160942 Ero1a endoplasmic reticulum oxidoreductase 1 alpha ENCODES a protein that exhibits oxidoreductase activity (ortholog); protein-disulfide reductase activity (ortholog); INVOLVED IN brown fat cell differentiation (ortholog); cell redox homeostasis (ortholog); cellular response to hypoxia (ortholog); ASSOCIATED WITH Brain Hypoxia-Ischemia (ortholog); FOUND IN dendrite (ortholog); endoplasmic reticulum (ortholog); extracellular space (ortholog) 12 77722061 77755378 + 22301074;30032202 116913759 MODEL JAAIVD010000007;XM_032918066 XP_032773957 ERO1-like protein alpha protein-coding 626160962 Slc38a4 solute carrier family 38 member 4 ENCODES a protein that exhibits alanine:sodium symporter activity (ortholog); amino acid transmembrane transporter activity (ortholog); amino acid:sodium symporter activity (ortholog); INVOLVED IN L-alanine import across plasma membrane (ortholog); L-alanine transmembrane transport (ortholog); L-arginine transmembrane transport (ortholog); PARTICIPATES IN amiloride pharmacodynamics pathway; bendroflumethiazide pharmacodynamics pathway; bumetanide pharmacodynamics pathway; FOUND IN microvillus membrane (ortholog) 1 269831745 269891265 - 30032202 116884497 MODEL JAAIVD010000025;XM_032885629 XP_032741520 sodium-coupled neutral amino acid transporter 4 protein-coding 626160982 LOC116894103 olfactory receptor 52H1-like 2 103526551 103527501 + 22301074 116894103 MODEL JAAIVD010000001;XM_032895821 XP_032751712 protein-coding 626160986 LOC116906091 elongin-C-like 7 70968147 70968494 - 22301074;30032202 116906091 MODEL JAAIVD010000026;XM_032909107 XP_032764998 protein-coding 626160989 LOC116900780 antileukoproteinase-like 5 153610966 153613361 + 22301074;30032202 116900780 MODEL JAAIVD010000023;XM_032902490 XP_032758381 protein-coding 626160997 LOC116902148 DNA (cytosine-5)-methyltransferase 3B 5 132975295 133015199 + 30032202 116902148 MODEL JAAIVD010000023;XM_032904481 XP_032760372 protein-coding 626161023 Wee2 WEE2 oocyte meiosis inhibiting kinase INVOLVED IN female meiotic nuclear division (ortholog); female pronucleus assembly (ortholog); negative regulation of cyclin-dependent protein serine/threonine kinase activity (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 5 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 99342251 99365107 - 22301074;30032202 116902886 MODEL JAAIVD010000024;XM_032905218 XP_032761109 wee1-like protein kinase 2 protein-coding 626161037 LOC116899870 small nucleolar RNA SNORA17 4 120839752 120839877 - 116899870 MODEL JAAIVD010000003;XR_004387864 snorna 626161040 LOC116892729 olfactory receptor 5-like 2 179629689 179630633 - 22301074 116892729 MODEL JAAIVD010000001;XM_032894603 XP_032750494 protein-coding 626161043 LOC116892914 zinc finger protein 420-like 2 203803541 203811044 - 30032202 116892914 MODEL JAAIVD010000001;XM_032894838;XM_032894839 XP_032750729;XP_032750730 zinc finger protein 429-like protein-coding 626161052 Nudt7 nudix hydrolase 7 ENCODES a protein that exhibits 5'-(N(7)-methylguanosine 5'-triphospho)-[mRNA] hydrolase activity (ortholog); coenzyme A diphosphatase activity (ortholog); magnesium ion binding (ortholog); INVOLVED IN acetyl-CoA catabolic process (ortholog); brown fat cell differentiation (ortholog); butyryl-CoA catabolic process (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog); FOUND IN peroxisome (ortholog) 17 33787480 33802696 + 22301074;30032202 116886413 MODEL JAAIVD010000011;XM_032887887;XM_032887888;XM_032887889 XP_032743778;XP_032743779;XP_032743780 peroxisomal coenzyme A diphosphatase NUDT7 protein-coding 626161064 LOC116900623 speedy protein E4-like 5 107386204 107390273 + 22301074;30032202 116900623 MODEL JAAIVD010000023;XM_032902342 XP_032758233 protein-coding 626161075 Bdnf brain derived neurotrophic factor ENCODES a protein that exhibits neurotrophin TRKB receptor binding (ortholog); INVOLVED IN axon extension (ortholog); axon guidance (ortholog); axon target recognition (ortholog); PARTICIPATES IN brain-derived neurotrophic factor signaling pathway; ASSOCIATED WITH acoustic neuroma (ortholog); acute stress disorder (ortholog); alcohol dependence (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytoplasmic vesicle (ortholog) 5 87969541 88020106 + 30032202 116901726 MODEL JAAIVD010000023;XM_032903861;XM_032903862;XM_032903863;XM_032903864;XM_032903865;XM_032903866 XP_032759752;XP_032759753;XP_032759754;XP_032759755;XP_032759756;XP_032759757 brain-derived neurotrophic factor protein-coding 626161095 Etfb electron transfer flavoprotein subunit beta ENCODES a protein that exhibits electron transfer activity (ortholog); INVOLVED IN amino acid catabolic process (ortholog); fatty acid beta-oxidation using acyl-CoA dehydrogenase (ortholog); respiratory electron transport chain (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; ASSOCIATED WITH chronic kidney disease (ortholog); genetic disease (ortholog); multiple acyl-CoA dehydrogenase deficiency (ortholog); FOUND IN electron transfer flavoprotein complex (ortholog); mitochondrial matrix (ortholog); mitochondrion (ortholog) 2 156020105 156034054 - 22301074;30032202 116892235 MODEL JAAIVD010000001;XM_032893806 XP_032749697 protein-coding 626161105 Catsper3 cation channel sperm associated 3 ENCODES a protein that exhibits voltage-gated calcium channel activity (ortholog); INVOLVED IN establishment of localization in cell (ortholog); flagellated sperm motility (ortholog); sodium ion transport (ortholog); FOUND IN acrosomal vesicle (ortholog); CatSper complex (ortholog); endoplasmic reticulum (ortholog) 14 74102721 74128948 + 22301074 116883256 MODEL JAAIVD010000009;XM_032884252 XP_032740143 cation channel sperm-associated protein 3 protein-coding 626161115 LOC116908941 keratin, type I cuticular Ha2 9 54827028 54834003 - 22301074;30032202 116908941 MODEL JAAIVD010000002;XM_032912399 XP_032768290 protein-coding 626161125 Mbnl2 muscleblind like splicing regulator 2 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of RNA splicing (ortholog); FOUND IN nucleoplasm (ortholog) 12 4399145 4558849 - 22301074 116913544 MODEL JAAIVD010000007;XM_032917745;XM_032917746;XM_032917747;XM_032917748;XM_032917749;XM_032917750 XP_032773636;XP_032773637;XP_032773638;XP_032773639;XP_032773640;XP_032773641 muscleblind-like protein 2 protein-coding 626161149 LOC116892789 vomeronasal type-2 receptor 116-like 2 186269374 186292144 + 22301074;30032202 116892789 MODEL JAAIVD010000001;XM_032894662 XP_032750553 protein-coding 626161158 Strbp spermatid perinuclear RNA binding protein ENCODES a protein that exhibits double-stranded RNA binding (ortholog); microtubule binding (ortholog); single-stranded RNA binding (ortholog); INVOLVED IN cell motility (ortholog); mechanosensory behavior (ortholog); spermatid development (ortholog); ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN manchette (ortholog); microtubule cytoskeleton (ortholog); nucleus (ortholog) 5 15339083 15470116 - 30032202 116901359 MODEL JAAIVD010000023;XM_032903211;XM_032903212;XR_004387980;XR_004387981 XP_032759102;XP_032759103 spermatid perinuclear RNA-binding protein protein-coding 626161190 Cep20 centrosomal protein 20 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN cilium assembly (ortholog); ASSOCIATED WITH Familial Thoracic Aortic Aneurysm 4 (ortholog); FOUND IN centriolar satellite (ortholog); centrosome (ortholog); ciliary basal body (ortholog) 9 7924094 7940285 + 22301074;30032202 116909226 MODEL JAAIVD010000002;XM_032912728;XM_032912729 XP_032768619;XP_032768620 lisH domain-containing protein FOPNL protein-coding 626161202 LOC116892316 uncharacterized LOC116892316 2 165462670 165474508 - 116892316 MODEL JAAIVD010000001;XR_004386941 ncrna 626161207 LOC116894601 vomeronasal type-1 receptor 4-like 2 181826277 181827188 + 22301074;30032202 116894601 MODEL JAAIVD010000001;XM_032896318 XP_032752209 protein-coding 626161211 Tmed10 transmembrane p24 trafficking protein 10 ENCODES a protein that exhibits protein transmembrane transporter activity (ortholog); protein-containing complex binding (ortholog); syntaxin binding (ortholog); INVOLVED IN COPI-coated vesicle budding (ortholog); cytosol to ERGIC protein transport (ortholog); Golgi organization (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); FOUND IN cis-Golgi network (ortholog); COPI-coated vesicle (ortholog); endoplasmic reticulum (ortholog) 7 99450248 99486441 - 30032202 116905295 MODEL JAAIVD010000026;XM_032908165 XP_032764056 transmembrane emp24 domain-containing protein 10 protein-coding 626161220 Pitpnc1 phosphatidylinositol transfer protein cytoplasmic 1 ENCODES a protein that exhibits phosphatidic acid binding (ortholog); phosphatidic acid transfer activity (ortholog); phosphatidylcholine transporter activity (ortholog); INVOLVED IN phospholipid transport (ortholog); signal transduction (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 9 71651185 71914649 + 22301074;30032202 116910037 MODEL JAAIVD010000002;XM_032913822;XM_032913823 XP_032769713;XP_032769714 cytoplasmic phosphatidylinositol transfer protein 1 protein-coding 626161237 LOC116903879 ATP synthase subunit g, mitochondrial-like 6 93075429 93075873 - 22301074;30032202 116903879 MODEL JAAIVD010000024;XM_032906631 XP_032762522 protein-coding 626161242 Rasal1 RAS protein activator like 1 INVOLVED IN positive regulation of dendrite extension (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); kidney disease (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog) 16 33145928 33178347 - 22301074 116885288 MODEL JAAIVD010000004;XM_032886535;XM_032886536 XP_032742426;XP_032742427 rasGAP-activating-like protein 1 protein-coding 626161269 Znf449 zinc finger protein 449 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN spermatogonial cell division (ortholog); ASSOCIATED WITH Dwarfism (ortholog) X 117156943 117178845 + 30032202 116888821 MODEL JAAIVD010000014;XM_032890099 XP_032745990 protein-coding 626161278 LOC116889280 small nuclear ribonucleoprotein G-like X 66405404 66405749 + 116889280 MODEL JAAIVD010000014 pseudo 626161279 Snrnp27 small nuclear ribonucleoprotein U4/U6.U5 subunit 27 ASSOCIATED WITH atrial fibrillation (ortholog); FOUND IN spliceosomal complex (ortholog); U4/U6 x U5 tri-snRNP complex (ortholog) 6 59625046 59635302 + 22301074;30032202 116903547 MODEL JAAIVD010000024;XM_032906161 XP_032762052 U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein protein-coding 626161289 Gxylt1 glucoside xylosyltransferase 1 ENCODES a protein that exhibits UDP-D-xylose:beta-D-glucoside alpha-1,3-D-xylosyltransferase activity (ortholog); UDP-xylosyltransferase activity (ortholog); INVOLVED IN protein O-linked glycosylation via N-acetyl-galactosamine (ortholog) 1 266179440 266207745 - 30032202 116884248 MODEL JAAIVD010000025;XM_032885335;XM_032885342 XP_032741226;XP_032741233 protein-coding 626161302 Neurl1 neuralized E3 ubiquitin protein ligase 1 ENCODES a protein that exhibits translation regulator activity (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); flagellated sperm motility (ortholog); lactation (ortholog); PARTICIPATES IN Notch signaling pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Colorectal Neoplasms (ortholog); Experimental Seizures (ortholog); FOUND IN apical dendrite (ortholog); cytoplasm (ortholog); dendritic spine (ortholog) 2 46709549 46792481 + 30032202 116891266 MODEL JAAIVD010000001;XM_032892155;XM_032892156;XR_004386824 XP_032748046;XP_032748047 E3 ubiquitin-protein ligase NEURL1 protein-coding 626161318 Sh3rf3 SH3 domain containing ring finger 3 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of JNK cascade (ortholog); protein autoubiquitination (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog) 18 24942992 24943673 + 22301074 116886901 MODEL JAAIVD010000013;XM_032888368 XP_032744259 E3 ubiquitin-protein ligase SH3RF3 protein-coding 626161323 Ankrd26 ankyrin repeat domain containing 26 INVOLVED IN glucose homeostasis (ortholog); negative regulation of ERK1 and ERK2 cascade (ortholog); negative regulation of fat cell differentiation (ortholog); ASSOCIATED WITH blood platelet disease (ortholog); genetic disease (ortholog); Gigantism (ortholog); FOUND IN actin cytoskeleton (ortholog); centrosome (ortholog) 14 28201991 28229598 + 116883883 MODEL JAAIVD010000009;XM_032885149;XM_032885150 XP_032741040;XP_032741041 ankyrin repeat domain 26;ankyrin repeat domain-containing protein 26 protein-coding 626161339 Rnf145 ring finger protein 145 9 27343607 27386411 + 22301074;30032202 116908687 MODEL JAAIVD010000002;XM_032911999;XM_032912000;XM_032912001 XP_032767890;XP_032767891;XP_032767892 protein-coding 626161362 Srd5a1 steroid 5 alpha-reductase 1 ENCODES a protein that exhibits 3-oxo-5-alpha-steroid 4-dehydrogenase activity (ortholog); amide binding (ortholog); NADPH binding (ortholog); INVOLVED IN androgen biosynthetic process (ortholog); androgen catabolic process (ortholog); androgen metabolic process (ortholog); PARTICIPATES IN testosterone biosynthetic pathway; ASSOCIATED WITH alcohol dependence (ortholog); breast carcinoma (ortholog); Cardiomegaly (ortholog); FOUND IN cell body fiber (ortholog); neuronal cell body (ortholog); perinuclear region of cytoplasm (ortholog) 2 200992999 201028278 - 22301074;30032202 116892906 MODEL JAAIVD010000001;XM_032894826 XP_032750717 3-oxo-5-alpha-steroid 4-dehydrogenase 1 protein-coding 626161371 Znf667 zinc finger protein 667 ASSOCIATED WITH Kidney Reperfusion Injury (ortholog) 2 179830648 179850915 - 30032202 116892721 MODEL JAAIVD010000001;XM_032894588;XM_032894589 XP_032750479;XP_032750480 protein-coding 626161383 LOC116909410 hemoglobin subunit alpha-1/2-like 9 3551444 3552288 - 22301074;30032202 116909410 MODEL JAAIVD010000002;XM_032912976 XP_032768867 protein-coding 626161390 LOC116887780 Z6 small nucleolar RNA 18 1214141 1214216 - 116887780 MODEL JAAIVD010000013;XR_004386277 snorna 626161393 LOC116898512 reticulocalbin-1-like 4 132775248 132787895 - 116898512 MODEL JAAIVD010000003 pseudo 626161394 Calcr calcitonin receptor ENCODES a protein that exhibits amylin receptor activity (ortholog); amyloid-beta binding (ortholog); calcitonin binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-modulating G protein-coupled receptor signaling pathway (ortholog); amylin receptor 1 signaling pathway (ortholog); ASSOCIATED WITH Herpes Simplex Encephalitis (ortholog); hypercalcemia (ortholog); osteoporosis (ortholog); FOUND IN acrosomal vesicle (ortholog); amylin receptor complex 1 (ortholog); amylin receptor complex 2 (ortholog) 6 134853509 134936826 + 22301074;30032202 116904464 MODEL JAAIVD010000024;XM_032907277 XP_032763168 protein-coding 626161413 LOC116894483 histone PARylation factor 1-like 1 72838782 72839313 + 116894483 MODEL JAAIVD010000025 pseudo 626161414 Dedd death effector domain containing ENCODES a protein that exhibits DNA binding (ortholog); INVOLVED IN decidualization (ortholog); extrinsic apoptotic signaling pathway via death domain receptors (ortholog); negative regulation of protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nucleolus (ortholog) 10 50493012 50507298 + 22301074;30032202 116910849 MODEL JAAIVD010000005;XM_032914602;XM_032914603;XM_032914604;XM_032914605;XM_032914606 XP_032770493;XP_032770494;XP_032770495;XP_032770496;XP_032770497 death effector domain-containing protein protein-coding 626161435 LOC116906357 small nucleolar RNA SNORD113/SNORD114 family 7 127207284 127207364 + 116906357 MODEL JAAIVD010000026 pseudo 626161436 LOC116900234 putative olfactory receptor 5AK3 5 62696703 62697632 - 22301074;30032202 116900234 MODEL JAAIVD010000023;XM_032901985 XP_032757876 protein-coding 626161439 Agl amylo-alpha-1,6-glucosidase and 4-alpha-glucanotransferase ENCODES a protein that exhibits 4-alpha-glucanotransferase activity (ortholog); amylo-alpha-1,6-glucosidase activity (ortholog); carbohydrate binding (ortholog); INVOLVED IN glycogen catabolic process (ortholog); glycogen metabolic process (ortholog); response to glucocorticoid (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen degradation pathway; glycogen storage disease type III pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); glycogen storage disease (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); inclusion body (ortholog) 3 42921827 42976534 + 22301074;30032202 116896324 MODEL JAAIVD010000012;XM_032897419 XP_032753310 amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase;glycogen debranching enzyme protein-coding 626161477 Rab13 RAB13, member RAS oncogene family ENCODES a protein that exhibits GTP binding (ortholog); GTPase activity (ortholog); protein kinase A catalytic subunit binding (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); cellular response to insulin stimulus (ortholog); cortical actin cytoskeleton organization (ortholog); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; ASSOCIATED WITH COVID-19 (ortholog); FOUND IN bicellular tight junction (ortholog); cell-cell junction (ortholog); cytoplasmic vesicle (ortholog) 3 63416042 63421421 - 22301074;30032202 116896618 MODEL JAAIVD010000012;XM_032897880;XM_032897881;XM_032897882;XR_004387350 XP_032753771;XP_032753772;XP_032753773 ras-related protein Rab-13 protein-coding 626161505 Eif3g eukaryotic translation initiation factor 3 subunit G ENCODES a protein that exhibits RNA binding (ortholog); translation initiation factor activity (ortholog); INVOLVED IN translational initiation (ortholog); viral translational termination-reinitiation (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Cataplexy and Narcolepsy (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); eukaryotic translation initiation factor 3 complex (ortholog) 8 17157420 17161522 - 22301074 116907520 MODEL JAAIVD010000027;XM_032910525 XP_032766416 protein-coding 626161520 LOC116894897 U6 spliceosomal RNA 2 38076229 38076333 + 116894897 MODEL JAAIVD010000001;XR_004387102 snrna 626161523 Tcim transcriptional and immune response regulator ENCODES a protein that exhibits Notch binding (ortholog); INVOLVED IN cellular response to heat (ortholog); endothelial cell activation involved in immune response (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 13 62011561 62012881 + 30032202 116914817 MODEL JAAIVD010000008;XM_032919274 XP_032775165 protein-coding 626161528 Msr1 macrophage scavenger receptor 1 ENCODES a protein that exhibits amyloid-beta binding (ortholog); cargo receptor activity (ortholog); low-density lipoprotein particle binding (ortholog); INVOLVED IN amyloid-beta clearance (ortholog); cholesterol transport (ortholog); establishment of localization in cell (ortholog); ASSOCIATED WITH arteriosclerosis (ortholog); Barrett's esophagus (ortholog); COVID-19 (ortholog); FOUND IN plasma membrane (ortholog) 13 47758008 47831006 + 22301074 116914659 MODEL JAAIVD010000008;XM_032919059;XM_032919061 XP_032774950;XP_032774952 macrophage scavenger receptor types I and II protein-coding 626161545 LOC116893130 NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3-like 2 80886051 80886408 - 116893130 MODEL JAAIVD010000001 pseudo 626161546 Dstyk dual serine/threonine and tyrosine protein kinase INVOLVED IN cellular response to fibroblast growth factor stimulus (ortholog); negative regulation of apoptotic process (ortholog); positive regulation of ERK1 and ERK2 cascade (ortholog); ASSOCIATED WITH CAKUT1 (ortholog); chronic kidney disease (ortholog); hereditary spastic paraplegia (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytoplasm (ortholog) 10 3379089 3426787 - 22301074 116911025 MODEL JAAIVD010000005;XM_032914758;XM_032914760 XP_032770649;XP_032770651 protein-coding 626161568 Ap1s2 adaptor related protein complex 1 subunit sigma 2 INVOLVED IN adipose tissue development (ortholog); establishment of localization in cell (ortholog); fat cell differentiation (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); genetic disease (ortholog); syndromic X-linked intellectual disability 5 (ortholog); FOUND IN Golgi apparatus (ortholog) X 24497924 24522458 + 22301074;30032202 116888541 MODEL JAAIVD010000014;XM_032889846;XM_032889847;XM_032889849;XM_032889850;XM_032889851;XM_032889852 XP_032745737;XP_032745738;XP_032745740;XP_032745741;XP_032745742;XP_032745743 AP-1 complex subunit sigma-2 protein-coding 626161596 Zc3h12c zinc finger CCCH-type containing 12C ASSOCIATED WITH psoriasis (ortholog); X-linked Alport syndrome (ortholog) 8 46123332 46175392 - 22301074;30032202 116906609 MODEL JAAIVD010000027;XM_032909366;XM_032909369 XP_032765257;XP_032765260 probable ribonuclease ZC3H12C protein-coding 626161608 LOC116913532 40S ribosomal protein S16-like 12 56420881 56421400 + 22301074;30032202 116913532 MODEL JAAIVD010000007;XM_032917732 XP_032773623 protein-coding 626161613 LOC116913247 10 kDa heat shock protein, mitochondrial-like 12 78620898 78621216 - 116913247 MODEL JAAIVD010000007 pseudo 626161614 Cdh13 cadherin 13 ENCODES a protein that exhibits adiponectin binding (ortholog); cadherin binding (ortholog); identical protein binding (ortholog); INVOLVED IN calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules (ortholog); cellular response to toxic substance (ortholog); cellular response to xenobiotic stimulus (ortholog); ASSOCIATED WITH amphetamine abuse (ortholog); arteriosclerosis (ortholog); Barrett's esophagus (ortholog); FOUND IN caveola (ortholog); cytoplasm (ortholog); external side of plasma membrane (ortholog) 17 37937303 38980550 + 22301074;30032202 116886687 MODEL JAAIVD010000011;XM_032888181 XP_032744072 cadherin-13 protein-coding 626161632 Sost sclerostin ENCODES a protein that exhibits carbohydrate binding (ortholog); DNA-binding transcription factor binding (ortholog); molecular function inhibitor activity (ortholog); INVOLVED IN cellular response to parathyroid hormone stimulus (ortholog); negative regulation of BMP signaling pathway (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN Wnt signaling, canonical pathway; ASSOCIATED WITH autosomal dominant craniodiaphyseal dysplasia (ortholog); bone development disease (ortholog); genetic disease (ortholog); FOUND IN extracellular space (ortholog); Golgi apparatus (ortholog); protein-containing complex (ortholog) 9 61255248 61259178 - 22301074;30032202 116910426 MODEL JAAIVD010000002;XM_032914271 XP_032770162 protein-coding 626161638 LOC116911478 interferon-activable protein 203-like 10 52554867 52571222 - 30032202 116911478 MODEL JAAIVD010000005;XM_032915460 XP_032771351 protein-coding 626161648 LOC116898479 protein SREK1IP1-like 4 113934753 113939286 + 116898479 MODEL JAAIVD010000003 pseudo 626161649 Fbll1 fibrillarin like 1 ENCODES a protein that exhibits RNA 2'-O-methyltransferase activity (ortholog); INVOLVED IN blastocyst hatching (ortholog); mRNA stabilization (ortholog); FOUND IN box C/D methylation guide snoRNP complex (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 9 18980617 18982086 - 22301074;30032202 116909982 MODEL JAAIVD010000002;XM_032913765 XP_032769656 rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 protein-coding 626161654 Dcaf7 DDB1 and CUL4 associated factor 7 ASSOCIATED WITH Craniofacial Abnormalities (ortholog); myeloid leukemia associated with Down Syndrome (ortholog); FOUND IN Cul4-RING E3 ubiquitin ligase complex (ortholog); cytosol (ortholog); nuclear body (ortholog) 9 73056622 73075561 - 22301074;30032202 116908680 MODEL JAAIVD010000002;XM_032911989 XP_032767880 DDB1- and CUL4-associated factor 7 protein-coding 626161665 Zbed4 zinc finger BED-type containing 4 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 258077947 258116525 + 22301074 116914826 MODEL JAAIVD010000025;XM_032919283 XP_032775174 zinc finger BED domain-containing protein 4 protein-coding 626161672 Kazn kazrin, periplakin interacting protein FOUND IN cornified envelope (ortholog); cytosol (ortholog); desmosome (ortholog) 1 15092499 16071699 + 22301074 116893144 MODEL JAAIVD010000025;XM_032895070;XM_032895072 XP_032750961;XP_032750963 kazrin protein-coding 626161696 Fhl2 four and a half LIM domains 2 ENCODES a protein that exhibits bHLH transcription factor binding (ortholog); identical protein binding (ortholog); transcription corepressor activity (ortholog); INVOLVED IN atrial cardiac muscle cell development (ortholog); heart trabecula formation (ortholog); negative regulation of apoptotic process (ortholog); ASSOCIATED WITH acute myeloid leukemia (ortholog); Breast Neoplasms (ortholog); Cardiomegaly (ortholog); FOUND IN M band (ortholog); nucleus (ortholog); Z disc (ortholog) 4 119267275 119309518 - 30032202 116899342 MODEL JAAIVD010000003;XM_032901030 XP_032756921 four and a half LIM domains protein 2 protein-coding 626161706 LOC116911831 small nucleolar RNA SNORA17 10 81842767 81842899 + 116911831 MODEL JAAIVD010000005;XR_004389366 snorna 626161709 LOC116900325 olfactory receptor 1052-like 5 64444772 64445710 - 22301074;30032202 116900325 MODEL JAAIVD010000023;XM_032902082 XP_032757973 protein-coding 626161712 LOC116914124 small nucleolar RNA SNORA17 12 82402522 82402648 - 116914124 MODEL JAAIVD010000007;XR_004389687 snorna 626161715 Hoxb2 homeobox B2 ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN anterior/posterior pattern specification (ortholog); dorsal/ventral pattern formation (ortholog); embryonic skeletal system morphogenesis (ortholog); FOUND IN nucleoplasm (ortholog) 9 58029856 58032050 - 22301074 116909013 MODEL JAAIVD010000002;XM_032912487 XP_032768378 homeobox protein Hox-B2 protein-coding 626161720 LOC116894735 histone H3.3A-like 2 87578292 87579600 - 116894735 MODEL JAAIVD010000001 pseudo 626161721 LOC116893343 uncharacterized LOC116893343 2 156498357 156510944 - 116893343 MODEL JAAIVD010000001 pseudo 626161722 Trnaa-ggc transfer RNA alanine (anticodon GGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 1 17301200 17301271 + 116890635 MODEL JAAIVD010000025 trna 626161723 Vamp3 vesicle associated membrane protein 3 ENCODES a protein that exhibits SNARE binding (ortholog); syntaxin-1 binding (ortholog); INVOLVED IN calcium-ion regulated exocytosis (ortholog); cellular response to type II interferon (ortholog); establishment of localization in cell (ortholog); PARTICIPATES IN autophagy pathway; FOUND IN apical plasma membrane (ortholog); cell surface (ortholog); clathrin-coated vesicle (ortholog) 1 9714347 9725436 + 22301074;30032202 116892421 MODEL JAAIVD010000025;XM_032894107 XP_032749998 vesicle-associated membrane protein 3 protein-coding 626161732 Gmps guanine monophosphate synthase ENCODES a protein that exhibits enzyme binding (ortholog); GMP synthase (glutamine-hydrolyzing) activity (ortholog); GMP synthase activity (ortholog); INVOLVED IN GMP biosynthetic process (ortholog); GMP salvage (ortholog); response to L-cysteine (ortholog); PARTICIPATES IN 2-hydroxyglutaric aciduria pathway; adenine phoshoribosyltransferase deficiency pathway; adenosine monophosphate deaminase deficiency pathway; ASSOCIATED WITH acute myelomonocytic leukemia (ortholog); Experimental Diabetes Mellitus (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog) 3 91228592 91273502 - 22301074;30032202 116896822 MODEL JAAIVD010000012;XM_032898299;XM_032898300 XP_032754190;XP_032754191 GMP synthase [glutamine-hydrolyzing] protein-coding 626161755 Sdk2 sidekick cell adhesion molecule 2 INVOLVED IN camera-type eye photoreceptor cell differentiation (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); retina layer formation (ortholog); FOUND IN synapse (ortholog) 9 75249603 75524524 + 22301074 116908759 MODEL JAAIVD010000002;XM_032912110 XP_032768001 protein sidekick-2 protein-coding 626161804 LOC116897720 guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-10-like 4 21905408 21905614 - 22301074;30032202 116897720 MODEL JAAIVD010000003;XM_032899176 XP_032755067 protein-coding 626161807 Atp6v1b2 ATPase H+ transporting V1 subunit B2 INVOLVED IN synaptic vesicle lumen acidification (ortholog); ASSOCIATED WITH autosomal dominant congenital deafness with onychodystrophy (ortholog); epilepsy (ortholog); follicular lymphoma (ortholog); FOUND IN apical plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 13 20331656 20356072 - 22301074 116914373 MODEL JAAIVD010000008;XM_032918577 XP_032774468 V-type proton ATPase subunit B, brain isoform protein-coding 626161825 LOC116910674 small nucleolar RNA SNORD104 9 72621748 72621817 - 116910674 MODEL JAAIVD010000002;XR_004389206 snorna 626161828 Il2ra interleukin 2 receptor subunit alpha ENCODES a protein that exhibits interleukin-2 binding (ortholog); interleukin-2 receptor activity (ortholog); INVOLVED IN activation-induced cell death of T cells (ortholog); inflammatory response to antigenic stimulus (ortholog); interleukin-2-mediated signaling pathway (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-2 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); alopecia areata (ortholog); asthma (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog) 14 17673194 17716675 + 30032202 116883489 MODEL JAAIVD010000009;XM_032884646 XP_032740537 interleukin-2 receptor subunit alpha protein-coding 626161840 Hhex hematopoietically expressed homeobox ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding, bending (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN animal organ morphogenesis (ortholog); anterior/posterior pattern specification (ortholog); B cell differentiation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); polycystic liver disease (ortholog); steatotic liver disease (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog); protein-DNA complex (ortholog) 2 36340405 36346025 - 22301074;30032202 116893790 MODEL JAAIVD010000001;XM_032895494 XP_032751385 hematopoietically-expressed homeobox protein HHEX protein-coding 626161848 Fbn2 fibrillin 2 ENCODES a protein that exhibits hormone activity (ortholog); INVOLVED IN bone trabecula formation (ortholog); camera-type eye development (ortholog); embryonic eye morphogenesis (ortholog); ASSOCIATED WITH aortic disease (ortholog); ARTERIAL DISSECTION (ortholog); autism spectrum disorder (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog); microfibril (ortholog) 15 73626989 73834050 + 22301074 116884667 MODEL JAAIVD010000010;XM_032885839 XP_032741730 fibrillin-2 protein-coding 626161916 Hmgn2 high mobility group nucleosomal binding domain 2 INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); regulation of development, heterochronic (ortholog); ASSOCIATED WITH Axenfeld-Rieger syndrome type 1 (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); female germ cell nucleus (ortholog) 1 24270168 24273432 + 22301074;30032202 116894946 MODEL JAAIVD010000025;XM_032896506 XP_032752397 non-histone chromosomal protein HMG-17 protein-coding 626161926 Oxct1 3-oxoacid CoA-transferase 1 ENCODES a protein that exhibits identical protein binding (ortholog); protein homodimerization activity (ortholog); succinyl-CoA:3-oxo-acid CoA-transferase activity (ortholog); INVOLVED IN adipose tissue development (ortholog); heart development (ortholog); ketone body catabolic process (ortholog); PARTICIPATES IN 3-hydroxy-3-methylglutaryl-CoA lyase deficiency pathway; 3-hydroxyisobutyric aciduria pathway; 3-methylcrotonyl CoA carboxylase 1 deficiency pathway; ASSOCIATED WITH Burns (ortholog); carbohydrate metabolic disorder (ortholog); Experimental Diabetes Mellitus (ortholog); FOUND IN mitochondrion (ortholog) 3 175990706 176122914 - 22301074;30032202 116897156 MODEL JAAIVD010000012;XM_032898826 XP_032754717 succinyl-CoA:3-ketoacid coenzyme A transferase 1, mitochondrial protein-coding 626161947 LOC116907686 uncharacterized LOC116907686 8 101456670 101457419 + 116907686 MODEL JAAIVD010000027;XR_004388836 ncrna 626161951 Ankrd35 ankyrin repeat domain 35 3 60613557 60634048 - 30032202 116896503 MODEL JAAIVD010000012;XM_032897678 XP_032753569 ankyrin repeat domain-containing protein 35 protein-coding 626161969 LOC116900568 olfactory receptor 4F15-like 5 90258994 90259956 + 22301074 116900568 MODEL JAAIVD010000023;XM_032902292 XP_032758183 protein-coding 626161972 Trnae-cuc transfer RNA glutamic acid (anticodon CUC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 50261927 50261998 + 116911907 MODEL JAAIVD010000005 trna 626161973 LOC116906327 U6 spliceosomal RNA 7 8286107 8286211 - 116906327 MODEL JAAIVD010000026;XR_004388614 snrna 626161976 LOC116889697 signal recognition particle protein-like 22301074;30032202 116889697 MODEL JAAIVD010000052;XM_032890583 XP_032746474 protein-coding 626161977 LOC116905576 protein yippee-like 5 7 116276885 116277300 + 116905576 MODEL JAAIVD010000026 pseudo 626161978 Rwdd4 RWD domain containing 4 13 40487567 40505410 - 22301074 116914569 MODEL JAAIVD010000008;XM_032918925;XM_032918926 XP_032774816;XP_032774817 RWD domain-containing protein 4 protein-coding 626161994 LOC116912969 small nucleolar RNA SNORA48 11 65151497 65151640 + 116912969 MODEL JAAIVD010000006;XR_004389535 snorna 626161997 LOC116914917 defensin alpha-like protein 1 13 64751732 64753096 - 22301074;30032202 116914917 MODEL JAAIVD010000008;XM_032919352 XP_032775243 protein-coding 626162002 LOC116905807 proteasome activator complex subunit 3-like 7 9961538 9962491 - 116905807 MODEL JAAIVD010000026 pseudo 626162003 LOC116907656 putative olfactory receptor 10D4 8 82772351 82773331 - 22301074 116907656 MODEL JAAIVD010000027;XM_032910748 XP_032766639 protein-coding 626162006 Kcna5 potassium voltage-gated channel subfamily A member 5 ENCODES a protein that exhibits alpha-actinin binding (ortholog); delayed rectifier potassium channel activity (ortholog); outward rectifier potassium channel activity (ortholog); INVOLVED IN atrial cardiac muscle cell action potential (ortholog); membrane hyperpolarization (ortholog); membrane repolarization during atrial cardiac muscle cell action potential (ortholog); PARTICIPATES IN acebutolol pharmacodynamics pathway; adrenergic beta receptor agonist and beta-blocker pharmacodynamics pathway; amiodarone pharmacodynamics pathway; ASSOCIATED WITH atrial fibrillation (ortholog); Brugada syndrome 1 (ortholog); Cardiac Arrhythmias (ortholog); FOUND IN cell surface (ortholog); intercalated disc (ortholog); intracellular canaliculus (ortholog) 6 21375908 21378827 + 22301074;30032202 116904585 MODEL JAAIVD010000024;XM_032907382 XP_032763273 protein-coding 626162011 LOC116895107 U2 spliceosomal RNA 2 1813473 1813602 + 116895107 MODEL JAAIVD010000001 pseudo 626162012 Dop1b DOP1 leucine zipper like protein B INVOLVED IN cognition (ortholog); embryonic pattern specification (ortholog); ASSOCIATED WITH keratoconus (ortholog); FOUND IN early endosome membrane (ortholog) 4 50839274 50935090 - 30032202 116898972 MODEL JAAIVD010000003;XM_032900396 XP_032756287 protein dopey-2 protein-coding 626162052 Brd8 bromodomain containing 8 ENCODES a protein that exhibits nuclear thyroid hormone receptor binding (ortholog); transcription coactivator activity (ortholog); INVOLVED IN cellular response to thyroid hormone stimulus (ortholog); positive regulation of double-strand break repair via homologous recombination (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); PARTICIPATES IN INO80 family mediated chromatin remodeling pathway; ASSOCIATED WITH colorectal adenocarcinoma (ortholog); endometriosis (ortholog); FOUND IN mitochondrion (ortholog); NuA4 histone acetyltransferase complex (ortholog); nucleoplasm (ortholog) 15 9730023 9756224 + 22301074;30032202 116884439 MODEL JAAIVD010000010;XM_032885530;XM_032885531 XP_032741421;XP_032741422 bromodomain-containing protein 8 protein-coding 626162083 LOC116906777 vomeronasal type-2 receptor 116-like 8 34285486 34310464 - 22301074;30032202 116906777 MODEL JAAIVD010000027;XM_032909623 XP_032765514 protein-coding 626162091 LOC116888099 uncharacterized LOC116888099 1 66712800 66718338 - 116888099 MODEL JAAIVD010000025;XR_004386291 ncrna 626162096 Tmem52b transmembrane protein 52B 6 18087315 18092559 - 116904560 MODEL JAAIVD010000024;XM_032907356 XP_032763247 protein-coding 626162105 LOC116900502 olfactory receptor 4C16-like 5 72004913 72005839 - 22301074 116900502 MODEL JAAIVD010000023;XM_032902237 XP_032758128 protein-coding 626162108 Slc22a12 solute carrier family 22 member 12 ENCODES a protein that exhibits PDZ domain binding (ortholog); urate transmembrane transporter activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); renal urate salt excretion (ortholog); response to xenobiotic stimulus (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); Congenital Abnormalities (ortholog); diabetes mellitus (ortholog); FOUND IN apical plasma membrane (ortholog); brush border membrane (ortholog); membrane (ortholog) 2 1139141 1146225 + 22301074;30032202 116890654 MODEL JAAIVD010000001;XM_032891020 XP_032746911 protein-coding 626162122 Rab33b RAB33B, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GTPase activity (ortholog); INVOLVED IN autophagosome assembly (ortholog); intra-Golgi vesicle-mediated transport (ortholog); negative regulation of constitutive secretory pathway (ortholog); PARTICIPATES IN autophagy pathway; ASSOCIATED WITH genetic disease (ortholog); Smith-McCort dysplasia (ortholog); Smith-McCort dysplasia 2 (ortholog); FOUND IN Golgi apparatus (ortholog); Golgi lumen (ortholog); Golgi membrane (ortholog) 3 102961989 102972387 - 22301074;30032202 116896888 MODEL JAAIVD010000012;XM_032898435 XP_032754326 ras-related protein Rab-33B protein-coding 626162128 LOC116907897 olfactory receptor 867 8 16156412 16157619 + 22301074;30032202 116907897 MODEL JAAIVD010000027;XM_032911093 XP_032766984 protein-coding 626162133 Znf746 zinc finger protein 746 ENCODES a protein that exhibits DNA-binding transcription factor activity (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 6 92801282 92825134 + 22301074;36535484 116903867 MODEL JAAIVD010000024;XM_032906615;XM_032906616;XM_032906617;XM_032906618 XP_032762506;XP_032762507;XP_032762508;XP_032762509 protein-coding 626162150 Pabpn1 poly(A) binding protein nuclear 1 ENCODES a protein that exhibits RNA polymerase binding (ortholog); INVOLVED IN cellular response to lipopolysaccharide (ortholog); MAPK cascade (ortholog); poly(A)+ mRNA export from nucleus (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; ASSOCIATED WITH oculopharyngeal muscular dystrophy (ortholog); FOUND IN nuclear inclusion body (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 12 70094739 70098540 - 22301074 116913125 MODEL JAAIVD010000007;XM_032917284 XP_032773175 polyadenylate-binding protein 2 protein-coding 626162161 LOC116913005 small nucleolar RNA SNORA17 11 49488509 49488633 - 116913005 MODEL JAAIVD010000006 pseudo 626162162 LOC116905620 60S ribosomal protein L32-like 7 17806297 17820453 - 22301074;30032202 116905620 MODEL JAAIVD010000026;XM_032908605 XP_032764496 protein-coding 626162167 Ezh2 enhancer of zeste 2 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); chromatin DNA binding (ortholog); DNA binding (ortholog); INVOLVED IN B cell differentiation (ortholog); cardiac muscle hypertrophy in response to stress (ortholog); cellular response to hydrogen peroxide (ortholog); PARTICIPATES IN histone modification pathway; methionine cycle/metabolic pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); acute lymphoblastic leukemia (ortholog); acute megakaryocytic leukemia (ortholog); FOUND IN chromatin (ortholog); chromatin silencing complex (ortholog); chromosome (ortholog) 6 93162732 93225375 + 22301074;30032202 116903882 MODEL JAAIVD010000024;XM_032906638;XM_032906639;XM_032906641;XM_032906642;XM_032906643;XM_032906644;XM_032906645;XM_032906646 XP_032762529;XP_032762530;XP_032762532;XP_032762533;XP_032762534;XP_032762535;XP_032762536;XP_032762537 histone-lysine N-methyltransferase EZH2 protein-coding 626162207 LOC116903732 sorbitol dehydrogenase-like 6 12616974 12618074 - 116903732 MODEL JAAIVD010000024 pseudo 626162208 Zswim9 zinc finger SWIM-type containing 9 INVOLVED IN hematopoietic progenitor cell differentiation (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog) 2 173756391 173777371 + 22301074 116892614 MODEL JAAIVD010000001;XM_032894418;XM_032894419 XP_032750309;XP_032750310 uncharacterized protein ZSWIM9 protein-coding 626162219 LOC116900283 olfactory receptor 8K5-like 5 63511989 63515664 - 22301074;30032202 116900283 MODEL JAAIVD010000023;XM_032902037;XM_032902038 XP_032757928;XP_032757929 protein-coding 626162226 LOC116915202 uncharacterized LOC116915202 14 22676632 22717072 - 116915202 MODEL JAAIVD010000009;XR_004389854 ncrna 626162231 LOC116885111 small nucleolar RNA SNORA70 15 33342320 33342453 - 116885111 MODEL JAAIVD010000010;XR_004385976 snorna 626162234 LOC116898402 triggering receptor expressed on myeloid cells 1-like 4 81735296 81739226 + 30032202 116898402 MODEL JAAIVD010000003;XM_032899689 XP_032755580 protein-coding 626162239 LOC116884581 protocadherin beta-6-like 15 1061858 1064892 + 22301074 116884581 MODEL JAAIVD010000010;XM_032885723 XP_032741614 protein-coding 626162244 LOC116914232 uncharacterized protein C14orf119 homolog 13 15638600 15639034 - 116914232 MODEL JAAIVD010000008;XM_032918426 XP_032774317 protein-coding 626162248 LOC116904869 carbonic anhydrase 13-like 7 46125783 46126565 + 116904869 MODEL JAAIVD010000026 pseudo 626162249 LOC116900892 protein BEX4-like 5 70586334 70586790 - 116900892 MODEL JAAIVD010000023 pseudo 626162250 LOC116884830 peptidyl-prolyl cis-trans isomerase A-like 15 27736207 27736717 + 116884830 MODEL JAAIVD010000010 pseudo 626162251 LOC116897980 uncharacterized LOC116897980 4 53151513 53162611 - 116897980 MODEL JAAIVD010000003;XR_004387632 ncrna 626162257 LOC116898501 non-POU domain-containing octamer-binding protein-like 4 126450333 126474488 + 116898501 MODEL JAAIVD010000003 pseudo 626162258 Rusf1 RUS family member 1 2 73638560 73666551 + 116891436 MODEL JAAIVD010000001;XM_032892498 XP_032748389 RUS1 family protein C16orf58 homolog protein-coding 626162275 Sema6a semaphorin 6A ENCODES a protein that exhibits identical protein binding (ortholog); semaphorin receptor binding (ortholog); transmembrane signaling receptor activity (ortholog); INVOLVED IN axon guidance (ortholog); cell surface receptor signaling pathway (ortholog); cellular response to vascular endothelial growth factor stimulus (ortholog); ASSOCIATED WITH Hereditary Neoplastic Syndromes (ortholog); Self-Limited Delayed Puberty (ortholog); FOUND IN plasma membrane (ortholog) 15 39646420 39766710 + 30032202 116884643 MODEL JAAIVD010000010;XM_032885786;XM_032885787;XM_032885788;XM_032885789;XM_032885791 XP_032741677;XP_032741678;XP_032741679;XP_032741680;XP_032741682 semaphorin-6A protein-coding 626162312 Pabpc1l poly(A) binding protein cytoplasmic 1 like ENCODES a protein that exhibits poly(A) binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); cytosolic mRNA polyadenylation (ortholog); nucleus localization (ortholog); ASSOCIATED WITH Oocyte Maturation Defect 1 (ortholog); Oocyte/Zygote/Embryo Maturation Arrest 22 (ortholog) 5 153926556 153953078 - 22301074;30032202 116900790 MODEL JAAIVD010000023;XM_032902501 XP_032758392 polyadenylate-binding protein 1-like protein-coding 626162329 Per3 period circadian regulator 3 ENCODES a protein that exhibits kinase binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN circadian rhythm (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); protein stabilization (ortholog); ASSOCIATED WITH advanced sleep phase syndrome (ortholog); advanced sleep phase syndrome 1 (ortholog); advanced sleep phase syndrome 3 (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 1 9728099 9764114 + 30032202 116892429 MODEL JAAIVD010000025;XM_032894119 XP_032750010 period circadian protein homolog 3 protein-coding 626162354 LOC116911471 coiled-coil domain-containing protein 121-like 10 59854604 59855934 - 116911471 MODEL JAAIVD010000005;XM_032915454 XP_032771345 protein-coding 626162358 Rnf130 ring finger protein 130 ENCODES a protein that exhibits ubiquitin-protein transferase activity (ortholog); INVOLVED IN programmed cell death (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN cytoplasm (ortholog) 9 32686642 32774649 + 116908707 MODEL JAAIVD010000002;XM_032912039 XP_032767930 E3 ubiquitin-protein ligase RNF130 protein-coding 626162370 LOC116888201 ras-related protein Rab-7a-like X 126448073 126448664 - 116888201 MODEL JAAIVD010000014 pseudo 626162371 St3gal2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2 ENCODES a protein that exhibits beta-D-galactosyl-(1->3)-N-acetyl-beta-D-galactosaminide alpha-2,3- sialyltransferase (ortholog); beta-galactoside (CMP) alpha-2,3-sialyltransferase activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN glycolipid biosynthetic process (ortholog); glycoprotein biosynthetic process (ortholog); obsolete ganglioside biosynthetic process via lactosylceramide (ortholog); ASSOCIATED WITH alcohol use disorder (ortholog); FOUND IN Golgi membrane (ortholog) 17 30622899 30671028 + 22301074;30032202 116886715 MODEL JAAIVD010000011;XM_032888223;XM_032888224 XP_032744114;XP_032744115 CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 2 protein-coding 626162384 Guf1 GTP binding elongation factor GUF1 ASSOCIATED WITH developmental and epileptic encephalopathy 40 (ortholog); long QT syndrome (ortholog); FOUND IN mitochondrion (ortholog) 11 26587787 26602926 + 22301074;30032202 116912365 MODEL JAAIVD010000006;XM_032916424 XP_032772315 GUF1 homolog, GTPase;translation factor GUF1, mitochondrial protein-coding 626162405 LOC116887826 proteasome subunit beta type-3-like X 35933186 35950186 + 116887826 MODEL JAAIVD010000014 pseudo 626162406 Comtd1 catechol-O-methyltransferase domain containing 1 FOUND IN mitochondrion (ortholog) 12 91621705 91624802 - 22301074;30032202 116913090 MODEL JAAIVD010000007;XM_032917225 XP_032773116 catechol O-methyltransferase domain-containing protein 1 protein-coding 626162417 Ephb1 EPH receptor B1 ENCODES a protein that exhibits axon guidance receptor activity (ortholog); protein tyrosine kinase activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN angiogenesis (ortholog); axon guidance (ortholog); camera-type eye morphogenesis (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH aortic dissection (ortholog); autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN axon (ortholog); cytoplasm (ortholog); cytosol (ortholog) 8 93235114 93668695 - 22301074;2485255;30032202 116907341 MODEL JAAIVD010000027;X13411;XM_032910279 CAA31777;XP_032766170 elk protein;ephrin type-B receptor 1 protein-coding 626162437 LOC116889555 small ubiquitin-related modifier 2-like 1 139810555 139811471 - 116889555 MODEL JAAIVD010000025 pseudo 626162438 LOC116890465 small nucleolar RNA SNORA8 1 141409027 141409166 + 116890465 MODEL JAAIVD010000025;XR_004386656 snorna 626162441 LOC116884703 elongation factor 1-gamma-like 15 34420744 34422097 - 116884703 MODEL JAAIVD010000010 pseudo 626162442 LOC116894964 small nucleolar RNA SNORA3/SNORA45 family 2 91961936 91962065 - 116894964 MODEL JAAIVD010000001;XR_004387157 snorna 626162445 LOC116890616 small nucleolar RNA SNORD121A 1 4347622 4347702 + 116890616 MODEL JAAIVD010000025;XR_004386766 snorna 626162448 LOC116893878 40S ribosomal protein S23-like 2 68953410 68953841 - 22301074;30032202 116893878 MODEL JAAIVD010000001;XM_032895601 XP_032751492 protein-coding 626162452 Mbd3 methyl-CpG binding domain protein 3 ENCODES a protein that exhibits DNA binding (ortholog); methyl-CpG binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); embryonic organ development (ortholog); epigenetic regulation of gene expression (ortholog); PARTICIPATES IN CHD family mediated chromatin remodeling pathway; ASSOCIATED WITH autistic disorder (ortholog); Experimental Seizures (ortholog); transient cerebral ischemia (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); heterochromatin (ortholog) 1 154483378 154490480 + 22301074 116905074 MODEL JAAIVD010000025;XM_032907785;XM_032907791;XM_032907802;XM_032907810 XP_032763676;XP_032763682;XP_032763693;XP_032763701 methyl-CpG-binding domain protein 3 protein-coding 626162473 Lrrc55 leucine rich repeat containing 55 ENCODES a protein that exhibits potassium channel activator activity (ortholog); transmembrane transporter binding (ortholog); voltage-gated potassium channel activity (ortholog); INVOLVED IN positive regulation of voltage-gated potassium channel activity (ortholog); potassium ion transmembrane transport (ortholog); FOUND IN voltage-gated potassium channel complex (ortholog) 5 62549397 62560334 - 30032202 116901595 MODEL JAAIVD010000023;XM_032903620 XP_032759511 leucine-rich repeat-containing protein 55 protein-coding 626162480 Trmt10a tRNA methyltransferase 10A ENCODES a protein that exhibits tRNA (guanosine(9)-N1)-methyltransferase activity (ortholog); tRNA binding (ortholog); INVOLVED IN magnesium ion homeostasis (ortholog); tRNA methylation (ortholog); tRNA N1-guanine methylation (ortholog); ASSOCIATED WITH genetic disease (ortholog); Microcephaly, Short Stature, and Impaired Glucose Metabolism 1 (ortholog); Nervous System Malformations (ortholog); FOUND IN actin cytoskeleton (ortholog); cytosol (ortholog); nucleolus (ortholog) 3 21001846 21016482 - 30032202 116896211 MODEL JAAIVD010000012;XM_032897261;XM_032897262;XM_032897263 XP_032753152;XP_032753153;XP_032753154 tRNA methyltransferase 10 homolog A protein-coding 626162498 LOC116888765 guanine nucleotide-binding protein-like 3-like protein X 30260815 30276209 + 30032202 116888765 MODEL JAAIVD010000014;XM_032890057 XP_032745948 protein-coding 626162509 LOC116902771 JNK1/MAPK8-associated membrane protein-like 6 73107644 73108730 + 22301074;30032202 116902771 MODEL JAAIVD010000024;XM_032905114 XP_032761005 protein-coding 626162514 LOC116886792 U6 spliceosomal RNA 17 41483577 41483684 + 116886792 MODEL JAAIVD010000011;XR_004386183 snrna 626162517 LOC116906341 U6 spliceosomal RNA 7 25410123 25410215 + 116906341 MODEL JAAIVD010000026 pseudo 626162518 Atp10b ATPase phospholipid transporting 10B (putative) ENCODES a protein that exhibits glycosylceramide flippase activity (ortholog); phosphatidylcholine flippase activity (ortholog); INVOLVED IN lysosomal membrane organization (ortholog); FOUND IN endoplasmic reticulum (ortholog); late endosome membrane (ortholog); lysosomal membrane (ortholog) 9 25916830 26092196 + 22301074;30032202 116908675 MODEL JAAIVD010000002;XM_032911974 XP_032767865 probable phospholipid-transporting ATPase VB protein-coding 626162545 Ccdc85b coiled-coil domain containing 85B ENCODES a protein that exhibits delta-catenin binding (ortholog); INVOLVED IN negative regulation of cell growth (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of fat cell differentiation (ortholog); FOUND IN adherens junction (ortholog); centrosome (ortholog); nucleus (ortholog) 2 2216853 2217884 + 30032202 116890722 MODEL JAAIVD010000001;XM_032891174;XM_032891176 XP_032747065;XP_032747067 coiled-coil domain-containing protein 85B protein-coding 626162553 LOC116896774 follistatin-related protein 5-like 3 77487103 77854075 - 22301074;30032202 116896774 MODEL JAAIVD010000012;XM_032898230;XM_032898231 XP_032754121;XP_032754122 protein-coding 626162566 Unc45a unc-45 myosin chaperone A ENCODES a protein that exhibits Hsp90 protein binding (ortholog); INVOLVED IN protein folding (ortholog); ASSOCIATED WITH Aagenaes syndrome (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); nuclear speck (ortholog) 2 119907247 119921664 + 30032202 116891920 MODEL JAAIVD010000001;XM_032893347 XP_032749238 protein unc-45 homolog A protein-coding 626162590 Pmm2 phosphomannomutase 2 ENCODES a protein that exhibits phosphomannomutase activity (ortholog); INVOLVED IN GDP-D-mannose biosynthetic process from fructose-6-phosphate (ortholog); GDP-mannose biosynthetic process (ortholog); GDP-mannose biosynthetic process from mannose (ortholog); ASSOCIATED WITH cerebellar ataxia (ortholog); cerebellar hypoplasia (ortholog); cerebral palsy (ortholog); FOUND IN cilium (ortholog); cytoplasm (ortholog); cytosol (ortholog) 9 13376074 13397514 - 22301074;30032202 116910437 MODEL JAAIVD010000002;XM_032914282;XM_032914283 XP_032770173;XP_032770174 protein-coding 626162606 Adora1 adenosine A1 receptor ENCODES a protein that exhibits G protein-coupled adenosine receptor activity (ortholog); G protein-coupled receptor binding (ortholog); G-protein beta/gamma-subunit complex binding (ortholog); INVOLVED IN adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway (ortholog); cognition (ortholog); detection of temperature stimulus involved in sensory perception of pain (ortholog); ASSOCIATED WITH asthma (ortholog); Bradycardia (ortholog); Brain Hypoxia-Ischemia (ortholog); FOUND IN asymmetric synapse (ortholog); axolemma (ortholog); basolateral plasma membrane (ortholog) 10 1450064 1483397 + 22301074;30032202 116911366 MODEL JAAIVD010000005;XM_032915290;XM_032915291;XM_032915292;XM_032915293 XP_032771181;XP_032771182;XP_032771183;XP_032771184 adenosine receptor A1 protein-coding 626162620 LOC116890069 vomeronasal type-1 receptor 4-like 1 214873261 214874223 - 22301074;30032202 116890069 MODEL JAAIVD010000025;XM_032890831 XP_032746722 protein-coding 626162624 Fbxo22 F-box protein 22 INVOLVED IN cellular response to starvation (ortholog); nucleocytoplasmic transport (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); ASSOCIATED WITH Tayoun-Maawali syndrome (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 49263519 49279715 + 22301074;30032202 116907991 MODEL JAAIVD010000027;XM_032911243 XP_032767134 F-box only protein 22 protein-coding 626162635 Def8 differentially expressed in FDCP 8 homolog INVOLVED IN lysosome localization (ortholog); positive regulation of bone resorption (ortholog); positive regulation of ruffle assembly (ortholog) 17 43035877 43056633 + 116886309 MODEL JAAIVD010000011;XM_032887752 XP_032743643 protein-coding 626162651 C12H3orf49 chromosome 12 C3orf49 homolog 12 83812522 83830724 + 116913537 MODEL JAAIVD010000007;XM_032917734 XP_032773625 putative uncharacterized protein C3orf49 homolog protein-coding 626162659 Dlk2 delta like non-canonical Notch ligand 2 ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN negative regulation of Notch signaling pathway (ortholog); regulation of fat cell differentiation (ortholog) 4 83563261 83567981 - 22301074;30032202 116899112 MODEL JAAIVD010000003;XM_032900629;XM_032900630;XM_032900631 XP_032756520;XP_032756521;XP_032756522 protein delta homolog 2 protein-coding 626162675 Ccdc59 coiled-coil domain containing 59 1 184176590 184188723 + 30032202 116908661 MODEL JAAIVD010000025;XM_032911942 XP_032767833 thyroid transcription factor 1-associated protein 26 protein-coding 626162683 LOC116910039 keratin, type I cytoskeletal 26 9 55109947 55119974 + 22301074;30032202 116910039 MODEL JAAIVD010000002;XM_032913827 XP_032769718 protein-coding 626162695 LOC116893981 glyceraldehyde-3-phosphate dehydrogenase-like 2 101302113 101303034 - 116893981 MODEL JAAIVD010000001 pseudo 626162696 LOC116890136 mitochondrial import inner membrane translocase subunit Tim8 A-like 1 247594062 247594354 + 116890136 MODEL JAAIVD010000025 pseudo 626162697 LOC116912953 small nucleolar RNA SNORA70 11 53791533 53791664 - 116912953 MODEL JAAIVD010000006;XR_004389520 snorna 626162700 LOC116904586 proteasome assembly chaperone 4-like 6 21501173 21501604 + 116904586 MODEL JAAIVD010000024 pseudo 626162701 Lrrtm4 leucine rich repeat transmembrane neuronal 4 ENCODES a protein that exhibits heparan sulfate proteoglycan binding (ortholog); INVOLVED IN AMPA glutamate receptor clustering (ortholog); neurotransmitter-gated ion channel clustering (ortholog); positive regulation of synapse assembly (ortholog); FOUND IN AMPA glutamate receptor complex (ortholog); GABA-ergic synapse (ortholog); glutamatergic synapse (ortholog) 6 65753370 66524040 - 22301074;30032202 116903660 MODEL JAAIVD010000024;XM_032906315;XM_032906316;XM_032906317;XM_032906318 XP_032762206;XP_032762207;XP_032762208;XP_032762209 leucine-rich repeat transmembrane neuronal protein 4 protein-coding 626162721 LOC116885980 U4 spliceosomal RNA 16 43503405 43503574 + 116885980 MODEL JAAIVD010000004 pseudo 626162722 LOC116889284 glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2-like X 75724393 75726400 - 116889284 MODEL JAAIVD010000014 pseudo 626162723 Cdkn3 cyclin dependent kinase inhibitor 3 ENCODES a protein that exhibits protein serine/threonine phosphatase activity (ortholog); protein tyrosine phosphatase activity (ortholog); INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH COVID-19 (ortholog); Experimental Liver Cirrhosis (ortholog); hepatocellular carcinoma (ortholog); FOUND IN cytosol (ortholog); perinuclear region of cytoplasm (ortholog) 12 76280703 76291721 - 22301074;30032202 116913733 MODEL JAAIVD010000007;XM_032918038 XP_032773929 cyclin-dependent kinase inhibitor 3 protein-coding 626162735 LOC116890290 tissue-resident T-cell transcription regulator protein ZNF683-like 1 24181656 24185666 - 30032202 116890290 MODEL JAAIVD010000025;XM_032891001 XP_032746892 protein-coding 626162741 Iqcf1 IQ motif containing F1 ENCODES a protein that exhibits calmodulin binding (ortholog); INVOLVED IN positive regulation of acrosome reaction (ortholog); positive regulation of flagellated sperm motility involved in capacitation (ortholog); FOUND IN acrosomal vesicle (ortholog) 8 97790545 97793074 + 30032202 116908298 MODEL JAAIVD010000027;XM_032911578 XP_032767469 IQ domain-containing protein F1 protein-coding 626162748 LOC116892333 cytochrome c oxidase subunit 7A1, mitochondrial ENCODES a protein that exhibits cytochrome-c oxidase activity (ortholog); INVOLVED IN oxidative phosphorylation (ortholog); ASSOCIATED WITH dilated cardiomyopathy (ortholog); FOUND IN mitochondrion (ortholog); respiratory chain complex IV (ortholog) 2 165819907 165840167 - 22301074;30032202 116892333 MODEL JAAIVD010000001;XM_032893962;XM_032893963;XM_032893964;XM_032893965 XP_032749853;XP_032749854;XP_032749855;XP_032749856 protein-coding 626162766 Il12a interleukin 12A ENCODES a protein that exhibits cytokine activity (ortholog); growth factor activity (ortholog); interleukin-12 beta subunit binding (ortholog); INVOLVED IN cell migration (ortholog); cell population proliferation (ortholog); cellular response to lipopolysaccharide (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; interleukin-27 signaling pathway; ASSOCIATED WITH asthma (ortholog); Chronic Hepatitis B (ortholog); Experimental Autoimmune Encephalomyelitis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); extracellular space (ortholog) 3 86584398 86591333 - 22301074 116896800 MODEL JAAIVD010000012;XM_032898270 XP_032754161 interleukin-12 subunit alpha protein-coding 626162777 Smim26 small integral membrane protein 26 ENCODES a protein that exhibits protein kinase binding (ortholog); transmembrane transporter binding (ortholog); FOUND IN mitochondrial outer membrane (ortholog); mitochondrion (ortholog) 5 124242306 124243663 + 30032202 116902050 MODEL JAAIVD010000023;XM_032904336 XP_032760227 protein-coding 626162783 Desi1 desumoylating isopeptidase 1 ENCODES a protein that exhibits deSUMOylase activity (ortholog); identical protein binding (ortholog); importin-alpha family protein binding (ortholog); INVOLVED IN protein desumoylation (ortholog); protein export from nucleus (ortholog); regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog); protein-containing complex (ortholog) 1 251735712 251758480 - 22301074;30032202 116914139 MODEL JAAIVD010000025;XM_032918412 XP_032774303 protein-coding 626162793 Eif4g1 eukaryotic translation initiation factor 4 gamma 1 ENCODES a protein that exhibits ATP binding (ortholog); eukaryotic initiation factor 4E binding (ortholog); mRNA binding (ortholog); INVOLVED IN behavioral fear response (ortholog); cellular response to nutrient levels (ortholog); energy homeostasis (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); late onset Parkinson's disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 4 5493887 5513903 + 22301074;30032202 116898701 MODEL JAAIVD010000003;XM_032899964;XM_032899965;XM_032899966;XM_032899967;XM_032899968;XM_032899969;XM_032899971;XM_032899972 XP_032755855;XP_032755856;XP_032755857;XP_032755858;XP_032755859;XP_032755860;XP_032755862;XP_032755863 protein-coding 626162844 LOC116886795 5S ribosomal RNA 17 43145012 43145130 - 116886795 MODEL JAAIVD010000011;XR_004386185 rrna 626162847 LOC116890004 transcription factor BTF3-like 1 181979627 181980107 - 116890004 MODEL JAAIVD010000025 pseudo 626162848 LOC116895197 14-3-3 protein theta-like 3 548239 576270 - 116895197 MODEL JAAIVD010000012 pseudo 626162849 LOC116908111 olfactory receptor 7D4-like 8 16797338 16798318 - 22301074;30032202 116908111 MODEL JAAIVD010000027;XM_032911392 XP_032767283 protein-coding 626162853 Mad1l1 mitotic arrest deficient 1 like 1 ENCODES a protein that exhibits identical protein binding (ortholog); kinetochore binding (ortholog); INVOLVED IN deactivation of mitotic spindle assembly checkpoint (ortholog); mitotic spindle assembly checkpoint signaling (ortholog); negative regulation of T cell proliferation (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Familial Prostate Cancer (ortholog); juvenile rheumatoid arthritis (ortholog); FOUND IN cytoplasm (ortholog); kinetochore (ortholog); MAD1 complex (ortholog) 16 12874290 13182424 + 22301074;30032202 116885611 MODEL JAAIVD010000004;XM_032886912 XP_032742803 mitotic spindle assembly checkpoint protein MAD1 protein-coding 626162875 LOC116914293 cytochrome P450 2D4 1 252093717 252103676 - 22301074;30032202 116914293 MODEL JAAIVD010000025;XM_032918532 XP_032774423 protein-coding 626162889 Chst12 carbohydrate sulfotransferase 12 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); dermatan sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); hypertension (ortholog) 16 12671587 12690247 - 22301074;30032202 116885688 MODEL JAAIVD010000004;XM_032886996 XP_032742887 protein-coding 626162895 Rpl36a ribosomal protein L36a ENCODES a protein that exhibits structural constituent of ribosome (ortholog); INVOLVED IN cytoplasmic translation (ortholog); PARTICIPATES IN ribosome biogenesis pathway; translation pathway; ASSOCIATED WITH Animal Disease Models (ortholog); lung adenocarcinoma (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); cytosolic large ribosomal subunit (ortholog) X 86890983 86893634 + 22301074;30032202 116889222 MODEL JAAIVD010000014;XM_032890375 XP_032746266 60S ribosomal protein L36a protein-coding 626162905 LOC116909376 60S ribosomal protein L5-like 9 28419074 28420044 + 116909376 MODEL JAAIVD010000002 pseudo 626162906 LOC116900828 ankyrin repeat domain-containing protein 26-like 5 45956609 46091180 + 116900828 MODEL JAAIVD010000023;XM_032902532 XP_032758423 protein-coding 626162928 Arl8b ARF like GTPase 8B ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); G protein activity (ortholog); INVOLVED IN anterograde axonal transport (ortholog); antigen processing and presentation following phagocytosis (ortholog); antigen processing and presentation of polysaccharide antigen via MHC class II (ortholog); FOUND IN axon (ortholog); cytolytic granule membrane (ortholog); cytoplasm (ortholog) 6 37971966 38014185 - 22301074;30032202 116903438 MODEL JAAIVD010000024;XM_032905991 XP_032761882 ADP ribosylation factor like GTPase 8B;ADP-ribosylation factor-like protein 8B protein-coding 626162939 LOC116910845 40S ribosomal protein S27-like 10 50035647 50035896 + 116910845 MODEL JAAIVD010000005 pseudo 626162940 Pxdc1 PX domain containing 1 14 53137938 53165791 - 22301074 116883819 MODEL JAAIVD010000009;XM_032885071 XP_032740962 PX domain-containing protein 1 protein-coding 626162949 Agap1 ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 ENCODES a protein that exhibits phospholipid binding (ortholog); INVOLVED IN regulation of modification of postsynaptic structure (ortholog); ASSOCIATED WITH autistic disorder (ortholog); COVID-19 (ortholog); FOUND IN postsynaptic endosome (ortholog) 4 161465711 161893746 + 22301074;30032202 116899627 MODEL JAAIVD010000003;XM_032901591;XM_032901592;XM_032901593;XM_032901594;XM_032901595;XM_032901597;XM_032901598;XM_032901599;XM_032901600 XP_032757482;XP_032757483;XP_032757484;XP_032757485;XP_032757486;XP_032757488;XP_032757489;XP_032757490;XP_032757491 arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1 protein-coding 626162984 LOC116893426 vomeronasal type-1 receptor 1-like 2 175182373 175183366 + 116893426 MODEL JAAIVD010000001 pseudo 626162985 Znf184 zinc finger protein 184 ASSOCIATED WITH prostate cancer (ortholog) 14 41746874 41762800 - 22301074;30032202 116883715 MODEL JAAIVD010000009;XM_032884930;XM_032884931;XM_032884932 XP_032740821;XP_032740822;XP_032740823 protein-coding 626162999 Naaladl1 N-acetylated alpha-linked acidic dipeptidase like 1 ENCODES a protein that exhibits aminopeptidase activity (ortholog); calcium ion binding (ortholog); protein homodimerization activity (ortholog); INVOLVED IN peptide catabolic process (ortholog); ASSOCIATED WITH fundus dystrophy (ortholog); optic atrophy (ortholog); FOUND IN apical plasma membrane (ortholog); membrane (ortholog) 2 1569074 1582580 - 30032202 116890674 MODEL JAAIVD010000001;XM_032891082 XP_032746973 aminopeptidase NAALADL1 protein-coding 626163021 Ptpn20 protein tyrosine phosphatase non-receptor type 20 FOUND IN centriolar satellite (ortholog) 13 9345292 9408794 + 22301074 116914600 MODEL JAAIVD010000008;XM_032918961 XP_032774852 tyrosine-protein phosphatase non-receptor type 20 protein-coding 626163036 LOC116906194 Ig heavy chain V region 6.96-like 7 120973010 120973508 - 116906194 MODEL JAAIVD010000026 pseudo 626163037 Yap1 Yes1 associated transcriptional regulator ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); proline-rich region binding (ortholog); INVOLVED IN blastocyst development (ortholog); bud elongation involved in lung branching (ortholog); canonical glycolysis (ortholog); PARTICIPATES IN transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH Brain Neoplasms (ortholog); Breast Neoplasms (ortholog); coloboma (ortholog); FOUND IN cell junction (ortholog); cell-cell junction (ortholog); cytoplasm (ortholog) 8 4129050 4199289 - 22301074;30032202 116906744 MODEL JAAIVD010000027;XM_032909566;XM_032909567;XM_032909568;XM_032909569;XM_032909570;XM_032909571;XM_032909572;XM_032909573 XP_032765457;XP_032765458;XP_032765459;XP_032765460;XP_032765461;XP_032765462;XP_032765463;XP_032765464 transcriptional coactivator YAP1 protein-coding 626163067 LOC116899955 Krueppel-like factor 5 5 14992203 14993623 + 116899955 MODEL JAAIVD010000023;XM_032901791 XP_032757682 protein-coding 626163071 Tbcd tubulin folding cofactor D ENCODES a protein that exhibits beta-tubulin binding (ortholog); GTPase activator activity (ortholog); INVOLVED IN cell morphogenesis involved in neuron differentiation (ortholog); mitotic cell cycle (ortholog); negative regulation of microtubule polymerization (ortholog); ASSOCIATED WITH complex cortical dysplasia with other brain malformations (ortholog); Developmental Disabilities (ortholog); early onset progressive encephalopathy with brain atrophy and thin corpus callosum (ortholog); FOUND IN centrosome (ortholog) 9 62422236 62582998 - 30032202 116909258 MODEL JAAIVD010000002;XM_032912780;XM_032912781 XP_032768671;XP_032768672 tubulin-specific chaperone D protein-coding 626163118 LOC116914839 uncharacterized LOC116914839 13 10036420 10082864 - 116914839 MODEL JAAIVD010000008;XR_004389778 ncrna 626163123 LOC116895972 charged multivesicular body protein 5-like 3 155298848 155405901 - 116895972 MODEL JAAIVD010000012 pseudo 626163124 Tpbgl trophoblast glycoprotein like 2 97889148 97890714 - 22301074;30032202 116893959 MODEL JAAIVD010000001;XM_032895677 XP_032751568 trophoblast glycoprotein-like protein-coding 626163129 Rbsn rabenosyn, RAB effector ENCODES a protein that exhibits phosphatidylinositol-3-phosphate binding (ortholog); small GTPase binding (ortholog); INVOLVED IN early endosome to Golgi transport (ortholog); Golgi to lysosome transport (ortholog); regulation of Golgi organization (ortholog); ASSOCIATED WITH Kariminejad neurodevelopmental syndrome (ortholog); MYELOFIBROSIS, CONGENITAL, WITH ANEMIA, NEUTROPENIA, DEVELOPMENTAL DELAY, AND (ortholog); FOUND IN early endosome (ortholog) 6 54749101 54777987 + 22301074 116903488 MODEL JAAIVD010000024;XM_032906065;XM_032906066;XM_032906067 XP_032761956;XP_032761957;XP_032761958 rabenosyn-5 protein-coding 626163153 LOC116911170 apoptosis regulator BAX-like 10 85109407 85110212 - 30032202 116911170 MODEL JAAIVD010000005;XM_032915032 XP_032770923 protein-coding 626163158 LOC116912131 oxysterol-binding protein 2-like 11 72823559 72865211 - 30032202 116912131 MODEL JAAIVD010000006;XM_032916041 XP_032771932 protein-coding 626163164 LOC116886876 uncharacterized LOC116886876 18 23812201 23831117 - 116886876 MODEL JAAIVD010000013;XR_004386192 ncrna 626163169 Tusc3 tumor suppressor candidate 3 ENCODES a protein that exhibits oligosaccharyltransferase complex binding (ortholog); INVOLVED IN cognition (ortholog); magnesium ion transport (ortholog); protein N-linked glycosylation via asparagine (ortholog); ASSOCIATED WITH autosomal recessive intellectual developmental disorder 24 (ortholog); autosomal recessive intellectual developmental disorder 7 (ortholog); congenital disorder of glycosylation (ortholog); FOUND IN oligosaccharyltransferase complex (ortholog) 13 48180556 48322573 - 30032202 116915018 MODEL JAAIVD010000008;XM_032919424;XM_032919425;XM_032919426 XP_032775315;XP_032775316;XP_032775317 protein-coding 626163189 Ptdss1 phosphatidylserine synthase 1 ENCODES a protein that exhibits L-serine-phosphatidylcholine phosphatidyltransferase activity (ortholog); L-serine-phosphatidylethanolamine phosphatidyltransferase activity (ortholog); INVOLVED IN phosphatidylserine biosynthetic process (ortholog); PARTICIPATES IN glycerophospholipid metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); Lenz-Majewski hyperostotic dwarfism (ortholog); microcephaly (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 1 206424131 206488848 + 22301074 116910360 MODEL JAAIVD010000025;XM_032914215 XP_032770106 protein-coding 626163206 Crk CRK proto-oncogene, adaptor protein ENCODES a protein that exhibits cytoskeletal protein binding (ortholog); enzyme binding (ortholog); ephrin receptor binding (ortholog); INVOLVED IN actin cytoskeleton organization (ortholog); cell chemotaxis (ortholog); cell population proliferation (ortholog); PARTICIPATES IN E-cadherin signaling pathway; endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH degenerative disc disease (ortholog); Myocardial Ischemia (ortholog); FOUND IN actin cytoskeleton (ortholog); membrane (ortholog); neuromuscular junction (ortholog) 9 94395007 94421711 + 22301074 116910117 MODEL JAAIVD010000002;XM_032913947;XM_032913948 XP_032769838;XP_032769839 adapter molecule crk protein-coding 626163219 Slc34a2 solute carrier family 34 member 2 ENCODES a protein that exhibits phosphate ion binding (ortholog); protein domain specific binding (ortholog); sodium ion binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); intracellular phosphate ion homeostasis (ortholog); phosphate ion transport (ortholog); PARTICIPATES IN phosphate transport pathway; ASSOCIATED WITH Drug-Related Side Effects and Adverse Reactions (ortholog); genetic disease (ortholog); hereditary breast ovarian cancer syndrome (ortholog); FOUND IN apical plasma membrane (ortholog); brush border (ortholog); brush border membrane (ortholog) 11 53060857 53071093 - 22301074;30032202 116912407 MODEL JAAIVD010000006;XM_032916469 XP_032772360 sodium-dependent phosphate transport protein 2B protein-coding 626163234 Riox2 ribosomal oxygenase 2 ENCODES a protein that exhibits identical protein binding (ortholog); peptidyl-histidine dioxygenase activity (ortholog); transcription corepressor activity (ortholog); ASSOCIATED WITH Lung Neoplasms (ortholog); FOUND IN cytosol (ortholog); nucleolus (ortholog); nucleoplasm (ortholog) 4 43307411 43323590 + 30032202 116898921 MODEL JAAIVD010000003;XM_032900329 XP_032756220 protein-coding 626163247 Atr ATR serine/threonine kinase ENCODES a protein that exhibits histone H2AXS139 kinase activity (ortholog); MutLalpha complex binding (ortholog); MutSalpha complex binding (ortholog); INVOLVED IN cellular response to gamma radiation (ortholog); cellular response to UV (ortholog); chromosome organization (ortholog); PARTICIPATES IN p53 signaling pathway; ASSOCIATED WITH adenoid cystic carcinoma (ortholog); alpha thalassemia-X-linked intellectual disability syndrome (ortholog); Alzheimer's disease (ortholog); FOUND IN ATR-ATRIP complex (ortholog); chromosome (ortholog); extrinsic component of synaptic vesicle membrane (ortholog) 8 87314963 87403170 + 22301074;30032202 116907034 MODEL JAAIVD010000027;XM_032909981 XP_032765872 serine/threonine-protein kinase ATR protein-coding 626163298 LOC116909496 olfactory receptor 2T29-like 9 39526864 39527826 - 22301074 116909496 MODEL JAAIVD010000002;XM_032913101 XP_032768992 protein-coding 626163301 LOC116910551 cytochrome c oxidase subunit 6C-2 FOUND IN mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog); mitochondrion (ortholog) 1 209500091 209511354 - 30032202 116910551 MODEL JAAIVD010000025;XM_032914462 XP_032770353 protein-coding 626163309 Pyy peptide YY ENCODES a protein that exhibits G protein-coupled receptor binding (ortholog); neuropeptide hormone activity (ortholog); neuropeptide Y receptor binding (ortholog); INVOLVED IN eating behavior (ortholog); negative regulation of response to food (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); Anorexia (ortholog); diarrhea (ortholog); FOUND IN extracellular space (ortholog) 9 61399849 61401009 - 22301074;30032202 116909636 MODEL JAAIVD010000002;XM_032913278;XM_032913279 XP_032769169;XP_032769170 protein-coding 626163321 Apcdd1 APC down-regulated 1 ENCODES a protein that exhibits identical protein binding (ortholog); Wnt-protein binding (ortholog); INVOLVED IN astrocyte cell migration (ortholog); hair follicle development (ortholog); negative regulation of Wnt signaling pathway (ortholog); ASSOCIATED WITH hypotrichosis 1 (ortholog); obesity (ortholog); FOUND IN plasma membrane (ortholog) 15 68823396 68853876 + 30032202 116884696 MODEL JAAIVD010000010;XM_032885879 XP_032741770 protein APCDD1 protein-coding 626163330 Sf1 splicing factor 1 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN Leydig cell differentiation (ortholog); male sex determination (ortholog); negative regulation of smooth muscle cell proliferation (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH ischemia (ortholog); melanoma (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN nuclear body (ortholog); nucleoplasm (ortholog); spliceosomal complex (ortholog) 2 1306871 1320166 - 22301074;30032202 116890659 MODEL JAAIVD010000001;XM_032891047;XM_032891048;XM_032891049;XM_032891050;XM_032891051;XM_032891052;XM_032891053;XM_032891054;XM_032891055;XM_032891056;XM_032891057 XP_032746938;XP_032746939;XP_032746940;XP_032746941;XP_032746942;XP_032746943;XP_032746944;XP_032746945;XP_032746946;XP_032746947;XP_032746948 protein-coding 626163377 LOC116905257 acyl-coenzyme A thioesterase 2, mitochondrial 7 98067267 98074282 + 22301074;30032202 116905257 MODEL JAAIVD010000026;XM_032908110 XP_032764001 protein-coding 626163384 LOC116900453 olfactory receptor 4C15-like 5 71074432 71075373 - 22301074 116900453 MODEL JAAIVD010000023;XM_032902193 XP_032758084 protein-coding 626163388 LOC116893827 pyrethroid hydrolase Ces2a 2 54930664 54938209 - 30032202 116893827 MODEL JAAIVD010000001;XM_032895543 XP_032751434 protein-coding 626163403 LOC116883477 prolactin-2A1 14 46885670 46891815 + 22301074;30032202 116883477 MODEL JAAIVD010000009;XM_032884631 XP_032740522 protein-coding 626163412 Pus1 pseudouridine synthase 1 ENCODES a protein that exhibits chromatin binding (ortholog); pseudouridine synthase activity (ortholog); steroid receptor RNA activator RNA binding (ortholog); INVOLVED IN mRNA pseudouridine synthesis (ortholog); positive regulation of transcription by RNA polymerase II (ortholog); tRNA pseudouridine synthesis (ortholog); ASSOCIATED WITH Disease Progression (ortholog); genetic disease (ortholog); mitochondrial metabolism disease (ortholog); FOUND IN cytoplasm (ortholog); mitochondrion (ortholog); nucleolus (ortholog) 16 43562397 43571474 + 22301074;30032202 116885570 MODEL JAAIVD010000004;XM_032886862;XM_032886863;XM_032886864;XM_032886866;XM_032886867 XP_032742753;XP_032742754;XP_032742755;XP_032742757;XP_032742758 tRNA pseudouridine synthase A protein-coding 626163434 B4galt1 beta-1,4-galactosyltransferase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity (ortholog); beta-tubulin binding (ortholog); INVOLVED IN acute inflammatory response (ortholog); angiogenesis involved in wound healing (ortholog); binding of sperm to zona pellucida (ortholog); PARTICIPATES IN galactose metabolic pathway; galactosemia pathway; Glut1 deficiency syndrome pathway; ASSOCIATED WITH congenital disorder of glycosylation (ortholog); congenital disorder of glycosylation type IId (ortholog); endocrine system disease (ortholog); FOUND IN basolateral plasma membrane (ortholog); brush border membrane (ortholog); cell surface (ortholog) 1 117330343 117380818 + 22301074;30032202 116902559 MODEL JAAIVD010000025;XM_032905031 XP_032760922 protein-coding 626163444 LOC116900091 40S ribosomal protein S14-like 5 17518203 17552931 - 116900091 MODEL JAAIVD010000023 pseudo 626163445 LOC116906970 putative gustatory receptor clone PTE03 8 15954237 15955160 - 22301074;30032202 116906970 MODEL JAAIVD010000027;XM_032909892 XP_032765783 protein-coding 626163449 Lipt1 lipoyltransferase 1 ENCODES a protein that exhibits N-acyltransferase activity (ortholog); INVOLVED IN protein lipoylation (ortholog); ASSOCIATED WITH Leigh disease (ortholog); Lipoyltransferase 1 Deficiency (ortholog); FOUND IN mitochondrion (ortholog) 4 114073088 114078449 + 22301074;30032202 116899303 MODEL JAAIVD010000003;XM_032900960;XM_032900961 XP_032756851;XP_032756852 lipoyltransferase 1, mitochondrial protein-coding 626163460 Adcy6 adenylate cyclase 6 ENCODES a protein that exhibits adenylate cyclase activity (ortholog); calcium- and calmodulin-responsive adenylate cyclase activity (ortholog); protein kinase binding (ortholog); INVOLVED IN adenylate cyclase-activating dopamine receptor signaling pathway (ortholog); adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); adenylate cyclase-activating serotonin receptor signaling pathway (ortholog); PARTICIPATES IN endothelin signaling pathway; G protein mediated signaling pathway via Galphas family; glucagon signaling pathway; ASSOCIATED WITH genetic disease (ortholog); Lethal Congenital Contracture Syndrome 8 (ortholog); ureteral obstruction (ortholog); FOUND IN endosome (ortholog); membrane (ortholog); microvillus membrane (ortholog) 1 271415509 271436799 - 22301074;30032202 116884751 MODEL JAAIVD010000025;XM_032885972 XP_032741863 adenylate cyclase type 6 protein-coding 626163486 LOC116897374 U4 spliceosomal RNA 3 90318704 90318867 - 116897374 MODEL JAAIVD010000012 pseudo 626163487 LOC116909144 lipase maturation factor 1-like 9 2844237 2913088 + 22301074;30032202 116909144 MODEL JAAIVD010000002;XM_032912629 XP_032768520 protein-coding 626163497 LOC116908949 uncharacterized LOC116908949 9 71298182 71300450 - 116908949 MODEL JAAIVD010000002;XR_004389041 ncrna 626163503 Acsm4 acyl-CoA synthetase medium chain family member 4 ENCODES a protein that exhibits decanoate-CoA ligase activity (ortholog); fatty acid ligase activity (ortholog); fatty-acyl-CoA synthase activity (ortholog); INVOLVED IN acyl-CoA metabolic process (ortholog); PARTICIPATES IN fatty acid beta degradation pathway; FOUND IN mitochondrion (ortholog) 2 81951137 81972364 - 30032202 116891599 MODEL JAAIVD010000001;XM_032892791 XP_032748682 acyl-coenzyme A synthetase ACSM4, mitochondrial protein-coding 626163520 Efna3 ephrin A3 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN ephrin receptor signaling pathway (ortholog); negative regulation of angiogenesis (ortholog); positive regulation of amyloid precursor protein catabolic process (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis 3 64347467 64356367 + 22301074;30032202 116896650 MODEL JAAIVD010000012;XM_032897979;XM_032897980;XM_032897981 XP_032753870;XP_032753871;XP_032753872 ephrin-A3 protein-coding 626163533 LOC116891066 60S ribosomal protein L27a-like 2 28947619 28948183 + 116891066 MODEL JAAIVD010000001 pseudo 626163534 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42387548 42387621 + 116884229 MODEL JAAIVD010000009 trna 626163535 LOC116888619 ubiquitin-conjugating enzyme E2 D2-like X 67490107 67496511 + 30032202 116888619 MODEL JAAIVD010000014;XM_032889916;XM_032889917 XP_032745807;XP_032745808 protein-coding 626163542 Gys2 glycogen synthase 2 ENCODES a protein that exhibits alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity (ortholog); D-glucose binding (ortholog); INVOLVED IN glycogen biosynthetic process (ortholog); glycogen metabolic process (ortholog); response to glucose (ortholog); PARTICIPATES IN congenital sucrase-isomaltase deficiency pathway; glycogen biosynthetic pathway; glycogen metabolic pathway; ASSOCIATED WITH genetic disease (ortholog); glycogen storage disease (ortholog); Glycogen Storage Disease 0, Liver (ortholog); FOUND IN cell cortex (ortholog); cortical actin cytoskeleton (ortholog); cytoplasm (ortholog) 6 172350 214986 - 22301074;30032202 116904505 MODEL JAAIVD010000024;XM_032907295 XP_032763186 glycogen [starch] synthase, liver protein-coding 626163563 LOC116908176 F-box/LRR-repeat protein 14-like 8 49371708 49377817 + 116908176 MODEL JAAIVD010000027 pseudo 626163564 Hpx hemopexin INVOLVED IN heme metabolic process (ortholog); hemoglobin metabolic process (ortholog); positive regulation of humoral immune response mediated by circulating immunoglobulin (ortholog); ASSOCIATED WITH acute kidney failure (ortholog); autoimmune disease (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN extracellular space (ortholog) 2 104430172 104437915 - 22301074;30032202 116893191 MODEL JAAIVD010000001;XM_032895093 XP_032750984 protein-coding 626163577 Msantd2 Myb/SANT DNA binding domain containing 2 8 33657145 33690336 + 116906547 MODEL JAAIVD010000027;XM_032909252;XM_032909253;XM_032909254;XM_032909255;XM_032909256;XM_032909257;XR_004388747 XP_032765143;XP_032765144;XP_032765145;XP_032765146;XP_032765147;XP_032765148 myb/SANT-like DNA-binding domain-containing protein 2 protein-coding 626163607 LOC116897450 U6 spliceosomal RNA 3 90197168 90197259 - 116897450 MODEL JAAIVD010000012 pseudo 626163608 LOC116892764 olfactory receptor 10A3-like 2 182732749 182733678 - 22301074 116892764 MODEL JAAIVD010000001;XM_032894643 XP_032750534 protein-coding 626163611 Dact3 dishevelled binding antagonist of beta catenin 3 ENCODES a protein that exhibits delta-catenin binding (ortholog); identical protein binding (ortholog); protein kinase A binding (ortholog); INVOLVED IN negative regulation of canonical Wnt signaling pathway (ortholog); negative regulation of cell growth (ortholog); negative regulation of epithelial to mesenchymal transition (ortholog); ASSOCIATED WITH intellectual disability (ortholog); polycystic ovary syndrome (ortholog); FOUND IN cytoplasm (ortholog) 2 172204747 172216675 - 30032202 116892571 MODEL JAAIVD010000001;XM_032894348 XP_032750239 dapper homolog 3 protein-coding 626163619 LOC116897735 E3 ubiquitin-protein ligase RBX1-like 4 100987184 100987599 + 116897735 MODEL JAAIVD010000003 pseudo 626163620 Trnav-cac transfer RNA valine (anticodon CAC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42415054 42415126 - 116884176 MODEL JAAIVD010000009 trna 626163621 LOC116885358 cytochrome c oxidase subunit 6A1, mitochondrial ASSOCIATED WITH Charcot-Marie-Tooth disease recessive intermediate D (ortholog); neuropathy (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 16 38473699 38476590 + 22301074;30032202 116885358 MODEL JAAIVD010000004;XM_032886632 XP_032742523 protein-coding 626163628 Zfp62 ZFP62 zinc finger protein 9 31897988 31916798 + 30032202 116908766 MODEL JAAIVD010000002;XM_032912118;XM_032912119;XM_032912120;XM_032912121;XM_032912122;XM_032912123;XM_032912124;XM_032912125;XM_032912127;XM_032912128;XM_032912129;XM_032912130;XM_032912131 XP_032768009;XP_032768010;XP_032768011;XP_032768012;XP_032768013;XP_032768014;XP_032768015;XP_032768016;XP_032768018;XP_032768019;XP_032768020;XP_032768021;XP_032768022 zinc finger protein 62 homolog protein-coding 626163657 LOC116895092 U2 spliceosomal RNA 2 207845610 207845750 + 116895092 MODEL JAAIVD010000001 pseudo 626163658 LOC116906308 U6 spliceosomal RNA 7 66024786 66024892 - 116906308 MODEL JAAIVD010000026;XR_004388596 snrna 626163661 LOC116904763 small nucleolar RNA SNORA17 6 42536457 42536590 + 116904763 MODEL JAAIVD010000024;XR_004388437 snorna 626163664 Galnt8 polypeptide N-acetylgalactosaminyltransferase 8 6 21084494 21106455 + 30032202 116903831 MODEL JAAIVD010000024;XM_032906543 XP_032762434 probable polypeptide N-acetylgalactosaminyltransferase 8 protein-coding 626163677 LOC116910307 cofilin-1-like 9 49558854 49559698 + 22301074;30032202 116910307 MODEL JAAIVD010000002;XM_032914172 XP_032770063 protein-coding 626163682 Lifr LIF receptor subunit alpha ENCODES a protein that exhibits ciliary neurotrophic factor receptor activity (ortholog); ciliary neurotrophic factor receptor binding (ortholog); cytokine binding (ortholog); INVOLVED IN animal organ regeneration (ortholog); ciliary neurotrophic factor-mediated signaling pathway (ortholog); cytokine-mediated signaling pathway (ortholog); ASSOCIATED WITH CAKUT (ortholog); connective tissue disease (ortholog); Developmental Disabilities (ortholog); FOUND IN receptor complex (ortholog) 3 173282515 173343882 - 22301074;30032202 116897145 MODEL JAAIVD010000012;XM_032898811 XP_032754702 leukemia inhibitory factor receptor protein-coding 626163706 LOC116889598 ubiquitin-conjugating enzyme E2 Q2-like Y 99051 100224 + 116889598 MODEL JAAIVD010000015 pseudo 626163707 LOC116890397 U6 spliceosomal RNA 1 251340397 251340501 + 116890397 MODEL JAAIVD010000025;XR_004386600 snrna 626163710 Rexo2 RNA exonuclease 2 ENCODES a protein that exhibits 3'-5' exonuclease activity (ortholog); 3'-5'-DNA exonuclease activity (ortholog); 3'-5'-RNA exonuclease activity (ortholog); INVOLVED IN nucleobase-containing compound metabolic process (ortholog); FOUND IN cytoplasm (ortholog); focal adhesion (ortholog); mitochondrial intermembrane space (ortholog) 8 42971011 42982367 - 22301074;30032202 116907039 MODEL JAAIVD010000027;XM_032909988 XP_032765879 oligoribonuclease, mitochondrial protein-coding 626163722 Cntn4 contactin 4 INVOLVED IN brain development (ortholog); negative regulation of neuron differentiation (ortholog); nervous system development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); Craniofacial Abnormalities (ortholog) 6 40001831 40954809 - 30032202 116903447 MODEL JAAIVD010000024;XM_032906003 XP_032761894 contactin-4 protein-coding 626163751 LOC116890228 40S ribosomal protein S20-like 1 270279474 270279983 - 22301074;30032202 116890228 MODEL JAAIVD010000025;XM_032890960 XP_032746851 protein-coding 626163756 Usp45 ubiquitin specific peptidase 45 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); INVOLVED IN cell migration (ortholog); DNA repair (ortholog); photoreceptor cell maintenance (ortholog); ASSOCIATED WITH Dwarfism (ortholog); fundus dystrophy (ortholog); Laterality Defects, Autosomal Dominant (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 1 121500672 121565541 - 22301074 116902927 MODEL JAAIVD010000025;XM_032905254 XP_032761145 ubiquitin carboxyl-terminal hydrolase 45 protein-coding 626163778 Klhl31 kelch like family member 31 INVOLVED IN negative regulation of JNK cascade (ortholog); negative regulation of protein phosphorylation (ortholog); ASSOCIATED WITH centronuclear myopathy (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 8 71896276 71918784 + 22301074;30032202 116907056 MODEL JAAIVD010000027;XM_032910010 XP_032765901 kelch-like protein 31 protein-coding 626163785 Gramd1a GRAM domain containing 1A ENCODES a protein that exhibits cholesterol binding (ortholog); cholesterol transfer activity (ortholog); INVOLVED IN cellular response to cholesterol (ortholog); FOUND IN cytosol (ortholog); endoplasmic reticulum membrane (ortholog); endoplasmic reticulum-plasma membrane contact site (ortholog) 2 164876500 164897858 + 30032202 116892287 MODEL JAAIVD010000001;XM_032893884;XM_032893886 XP_032749775;XP_032749777 protein Aster-A protein-coding 626163810 Hnrnpab heterogeneous nuclear ribonucleoprotein A/B ENCODES a protein that exhibits protein-containing complex binding (ortholog); RNA binding (ortholog); sequence-specific double-stranded DNA binding (ortholog); INVOLVED IN cellular response to amino acid stimulus (ortholog); epithelial to mesenchymal transition (ortholog); mRNA modification (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Experimental Mammary Neoplasms (ortholog); hepatocellular carcinoma (ortholog); transient cerebral ischemia (ortholog); FOUND IN cytoplasm (ortholog); dendrite (ortholog); glutamatergic synapse (ortholog) 9 34188282 34194132 - 22301074;30032202 116910513 MODEL JAAIVD010000002;XM_032914415;XM_032914416 XP_032770306;XP_032770307 protein-coding 626163823 LOC116911972 sperm motility kinase X-like 11 35380646 35381490 - 116911972 MODEL JAAIVD010000006 pseudo 626163824 LOC116888476 DNA replication licensing factor MCM2-like X 41795378 41798086 - 116888476 MODEL JAAIVD010000014 pseudo 626163825 LOC116893161 olfactory receptor 51V1-like 2 102003677 102004928 + 116893161 MODEL JAAIVD010000001 pseudo 626163826 Pou1f1 POU class 1 homeobox 1 ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); INVOLVED IN adenohypophysis development (ortholog); B cell differentiation (ortholog); cell fate specification (ortholog); ASSOCIATED WITH combined or isolated pituitary hormone deficiency 1 (ortholog); combined pituitary hormone deficiency (ortholog); combined pituitary hormone deficiency 2 (ortholog); FOUND IN chromatin (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 4 76783598 76801584 + 1561093;22301074;30032202 116898016 MODEL JAAIVD010000003;X63089;XM_032899407;XM_032899408 XP_032755298;XP_032755299 Pit-1 pituitary-specific positive transcription factor 1 protein-coding 626163840 LOC116901611 uncharacterized LOC116901611 5 65255428 65257532 - 116901611 MODEL JAAIVD010000023;XR_004388008 ncrna 626163844 LOC116884119 U1 spliceosomal RNA 14 48364785 48364937 - 116884119 MODEL JAAIVD010000009 pseudo 626163845 LOC116913331 60S ribosomal protein L6-like 12 65046764 65047666 + 116913331 MODEL JAAIVD010000007 pseudo 626163846 LOC116894159 olfactory receptor 2AG1-like 2 104982980 104983930 - 22301074 116894159 MODEL JAAIVD010000001;XM_032895877 XP_032751768 protein-coding 626163849 LOC116885049 small nucleolar RNA SNORA17 15 28888856 28888987 - 116885049 MODEL JAAIVD010000010;XR_004385935 snorna 626163852 LOC116892230 zinc finger protein 2 homolog 2 155827937 155838882 - 30032202 116892230 MODEL JAAIVD010000001;XM_032893795;XM_032893796 XP_032749686;XP_032749687 zinc finger protein 585A-like protein-coding 626163864 Lonrf3 LON peptidase N-terminal domain and ring finger 3 X 102512993 102546407 + 22301074 116888825 MODEL JAAIVD010000014;XM_032890100;XM_032890101 XP_032745991;XP_032745992 LON peptidase N-terminal domain and RING finger protein 3 protein-coding 626163884 LOC116910848 monocarboxylate transporter 7-like 10 83433549 83435111 - 116910848 MODEL JAAIVD010000005 pseudo 626163885 Gpha2 glycoprotein hormone subunit alpha 2 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); thyrotropin-releasing hormone receptor binding (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); cell surface receptor signaling pathway (ortholog); ASSOCIATED WITH melanoma (ortholog); FOUND IN extracellular region (ortholog) 2 1462015 1462973 - 22301074;30032202 116890670 MODEL JAAIVD010000001;XM_032891076 XP_032746967 glycoprotein hormone alpha-2 protein-coding 626163892 Phf1 PHD finger protein 1 ENCODES a protein that exhibits chromatin binding (ortholog); histone H3K36me3 reader activity (ortholog); histone H3K4me3 reader activity (ortholog); INVOLVED IN DNA repair-dependent chromatin remodeling (ortholog); PARTICIPATES IN histone modification pathway; FOUND IN centrosome (ortholog); cytosol (ortholog); ESC/E(Z) complex (ortholog) 18 6866496 6871459 - 30032202 116887652 MODEL JAAIVD010000013;XM_032889251;XM_032889252;XR_004386227;XR_004386228 XP_032745142;XP_032745143 protein-coding 626163920 Wdr72 WD repeat domain 72 INVOLVED IN ameloblast differentiation (ortholog); amelogenesis (ortholog); enamel mineralization (ortholog); ASSOCIATED WITH amelogenesis imperfecta (ortholog); amelogenesis imperfecta hypomaturation type 2A3 (ortholog); amelogenesis imperfecta type 1C (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); nucleus (ortholog) 8 68437654 68616686 + 22301074;30032202 116908209 MODEL JAAIVD010000027;XM_032911486 XP_032767377 WD repeat-containing protein 72 protein-coding 626163943 Trnaa-agc transfer RNA alanine (anticodon AGC) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 42286904 42286976 + 116884226 MODEL JAAIVD010000009 trna 626163944 Tmprss2 transmembrane serine protease 2 ENCODES a protein that exhibits serine-type endopeptidase activity (ortholog); INVOLVED IN entry receptor-mediated virion attachment to host cell (ortholog); positive regulation of viral entry into host cell (ortholog); protein autoprocessing (ortholog); ASSOCIATED WITH Cancer Pain (ortholog); Coronavirus infectious disease (ortholog); COVID-19 (ortholog); FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 4 46929267 46968458 + 22301074;30032202 116898936 MODEL JAAIVD010000003;XM_032900351 XP_032756242 transmembrane protease serine 2 protein-coding 626163962 LOC116915120 small nucleolar RNA SNORA48 13 7669073 7669216 + 116915120 MODEL JAAIVD010000008;XR_004389801 snorna 626163965 Pgcka1 PDCD10 and GCKIII kinases associated 1 INVOLVED IN regulation of cell cycle (ortholog); ASSOCIATED WITH cholestasis (ortholog); FOUND IN cell periphery (ortholog) 11 18619281 18621774 + 116912492 MODEL JAAIVD010000006;XM_032916579 XP_032772470 C11H4orf19 chromosome 11 C4orf19 homolog;uncharacterized protein C4orf19 homolog protein-coding 626163971 Srrm2 serine/arginine repetitive matrix 2 ENCODES a protein that exhibits C2H2 zinc finger domain binding (ortholog); INVOLVED IN mRNA splicing, via spliceosome (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 72 (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN Cajal body (ortholog); catalytic step 2 spliceosome (ortholog); nuclear speck (ortholog) 9 1099099 1132903 + 22301074;30032202 116909912 MODEL JAAIVD010000002;XM_032913664;XM_032913665;XM_032913666;XM_032913668;XM_032913669;XM_032913670;XM_032913671;XM_032913672;XM_032913673;XR_004389105;XR_004389106;XR_004389107;XR_004389108;XR_004389109 XP_032769555;XP_032769556;XP_032769557;XP_032769559;XP_032769560;XP_032769561;XP_032769562;XP_032769563;XP_032769564 serine/arginine repetitive matrix protein 2 protein-coding 626164027 LOC116894180 olfactory receptor 469 2 105933420 105934364 - 22301074;30032202 116894180 MODEL JAAIVD010000001;XM_032895897 XP_032751788 protein-coding 626164030 Spmip7 sperm microtubule inner protein 7 INVOLVED IN spermatogenesis (ortholog) 11 80399334 80452152 + 116912468 MODEL JAAIVD010000006;XM_032916534;XM_032916536 XP_032772425;XP_032772427 Spata48 spermatogenesis associated 48;spermatogenesis-associated protein 48 protein-coding 626164048 LOC116887899 small nuclear ribonucleoprotein F-like X 51946386 51946673 - 116887899 MODEL JAAIVD010000014 pseudo 626164049 Znf318 zinc finger protein 318 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); positive regulation of DNA-templated transcription (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 4 83442711 83480710 - 22301074;30032202 116899110 MODEL JAAIVD010000003;XM_032900627;XM_032900628;XR_004387690 XP_032756518;XP_032756519 protein-coding 626164071 Lgmn legumain ENCODES a protein that exhibits cysteine-type endopeptidase activity (ortholog); endopeptidase activator activity (ortholog); peptidase activity (ortholog); INVOLVED IN antigen processing and presentation of exogenous peptide antigen via MHC class I (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent (ortholog); antigen processing and presentation of exogenous peptide antigen via MHC class II (ortholog); ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); High Myopia (ortholog); lymphatic system disease (ortholog); FOUND IN apical part of cell (ortholog); cytoplasm (ortholog); extracellular region (ortholog) 7 113679420 113717580 - 22301074;30032202 116905356 MODEL JAAIVD010000026;XM_032908271;XM_032908272;XM_032908274 XP_032764162;XP_032764163;XP_032764165 protein-coding 626164095 LOC116895796 high mobility group protein B1-like 3 62400293 62400995 + 116895796 MODEL JAAIVD010000012 pseudo 626164096 LOC116894767 succinate dehydrogenase assembly factor 3, mitochondrial-like 2 207411798 207413729 + 116894767 MODEL JAAIVD010000001 pseudo 626164097 Cd5 CD5 molecule INVOLVED IN apoptotic signaling pathway (ortholog); T cell costimulation (ortholog); ASSOCIATED WITH B-Cell Chronic Lymphocytic Leukemia (ortholog); rheumatoid arthritis (ortholog); FOUND IN cell surface (ortholog); external side of plasma membrane (ortholog); plasma membrane (ortholog) 2 10199345 10212495 - 30032202 116891541 MODEL JAAIVD010000001;XM_032892697 XP_032748588 T-cell surface glycoprotein CD5 protein-coding 626164111 Ldah lipid droplet associated hydrolase ENCODES a protein that exhibits sterol ester esterase activity (ortholog); INVOLVED IN cholesterol homeostasis (ortholog); intracellular triglyceride homeostasis (ortholog); lipid droplet fusion (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN endoplasmic reticulum (ortholog); lipid droplet (ortholog) 7 28548571 28626229 + 22301074;30032202 116906295 MODEL JAAIVD010000026;XM_032909189;XM_032909190 XP_032765080;XP_032765081 lipid droplet-associated hydrolase protein-coding 626164128 Rab3gap2 RAB3 GTPase activating non-catalytic protein subunit 2 ENCODES a protein that exhibits enzyme regulator activity (ortholog); guanyl-nucleotide exchange factor activity (ortholog); small GTPase binding (ortholog); INVOLVED IN establishment of protein localization to endoplasmic reticulum membrane (ortholog); positive regulation of autophagosome assembly (ortholog); positive regulation of endoplasmic reticulum tubular network organization (ortholog); ASSOCIATED WITH amenorrhea (ortholog); cataract (ortholog); esophageal atresia/tracheoesophageal fistula (ortholog); FOUND IN cytosol (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 10 63372260 63445041 + 30032202 116911181 MODEL JAAIVD010000005;XM_032915048 XP_032770939 rab3 GTPase-activating protein non-catalytic subunit protein-coding 626164167 Eif4e2 eukaryotic translation initiation factor 4E family member 2 ENCODES a protein that exhibits mRNA cap binding (ortholog); RNA 7-methylguanosine cap binding (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN in utero embryonic development (ortholog); miRNA-mediated gene silencing by inhibition of translation (ortholog); negative regulation of translation (ortholog); FOUND IN cytoplasm (ortholog); P-body (ortholog) 4 159341101 159369241 + 22301074;30032202 116899602 MODEL JAAIVD010000003;XM_032901548;XM_032901550;XM_032901551;XM_032901552 XP_032757439;XP_032757441;XP_032757442;XP_032757443 eukaryotic translation initiation factor 4E type 2 protein-coding 626164187 Ppp1r26 protein phosphatase 1 regulatory subunit 26 5 8213750 8222228 - 30032202 116901232 MODEL JAAIVD010000023;XM_032902969;XM_032902970;XM_032902971;XM_032902972;XM_032902973;XM_032902974 XP_032758860;XP_032758861;XP_032758862;XP_032758863;XP_032758864;XP_032758865 protein-coding 626164208 Smurf2 SMAD specific E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits identical protein binding (ortholog); SMAD binding (ortholog); transforming growth factor beta receptor binding (ortholog); INVOLVED IN negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); positive regulation of trophoblast cell migration (ortholog); ubiquitin-dependent protein catabolic process (ortholog); PARTICIPATES IN Bone morphogenetic proteins signaling pathway; transforming growth factor-beta Smad dependent signaling pathway; ASSOCIATED WITH diffuse large B-cell lymphoma (ortholog); FOUND IN nuclear speck (ortholog); ubiquitin ligase complex (ortholog) 9 72215793 72310198 + 22301074;30032202 116910429 MODEL JAAIVD010000002;XM_032914273;XM_032914274 XP_032770164;XP_032770165 E3 ubiquitin-protein ligase SMURF2 protein-coding 626164234 C2H11orf16 chromosome 2 C11orf16 homolog 2 91744876 91756000 + 116891675 MODEL JAAIVD010000001;XM_032892932 XP_032748823 uncharacterized protein C11orf16 homolog protein-coding 626164244 Slc12a2 solute carrier family 12 member 2 ENCODES a protein that exhibits ammonium channel activity (ortholog); chloride:monoatomic cation symporter activity (ortholog); Hsp90 protein binding (ortholog); INVOLVED IN ammonium transmembrane transport (ortholog); branching involved in mammary gland duct morphogenesis (ortholog); cell volume homeostasis (ortholog); ASSOCIATED WITH Animal Mammary Neoplasms (ortholog); autism spectrum disorder (ortholog); autosomal dominant nonsyndromic deafness 78 (ortholog); FOUND IN apical plasma membrane (ortholog); basal plasma membrane (ortholog); basolateral plasma membrane (ortholog) 15 73914126 73981960 - 22301074;30032202 116884847 MODEL JAAIVD010000010;XM_032886085;XM_032886086 XP_032741976;XP_032741977 protein-coding 626164276 LOC116909863 olfactory receptor 1468-like 9 31638671 31639609 - 22301074;30032202 116909863 MODEL JAAIVD010000002;XM_032913591 XP_032769482 protein-coding 626164279 Taok1 TAO kinase 1 ENCODES a protein that exhibits alpha-tubulin binding (ortholog); beta-tubulin binding (ortholog); kinase activity (ortholog); INVOLVED IN central nervous system neuron development (ortholog); DNA damage response (ortholog); execution phase of apoptosis (ortholog); PARTICIPATES IN p38 MAPK signaling pathway; ASSOCIATED WITH autosomal dominant intellectual developmental disorder 1 (ortholog); DEVELOPMENTAL DELAY WITH OR WITHOUT INTELLECTUAL IMPAIRMENT OR BEHAVIORAL ABNORMALITIES (ortholog); Developmental Disabilities (ortholog); FOUND IN cytosol (ortholog); microtubule cytoskeleton (ortholog); nuclear body (ortholog) 9 96202244 96281645 - 22301074;30032202 116908534 MODEL JAAIVD010000002;XM_032911722;XM_032911723;XM_032911724;XM_032911725;XM_032911726 XP_032767613;XP_032767614;XP_032767615;XP_032767616;XP_032767617 serine/threonine-protein kinase TAO1 protein-coding 626164310 Adra1b adrenoceptor alpha 1B ENCODES a protein that exhibits alpha1-adrenergic receptor activity (ortholog); protein heterodimerization activity (ortholog); INVOLVED IN adult heart development (ortholog); behavioral response to cocaine (ortholog); blood vessel remodeling (ortholog); PARTICIPATES IN G protein mediated signaling pathway via Galphaq family; ASSOCIATED WITH Cardiomegaly (ortholog); Experimental Liver Cirrhosis (ortholog); hyperinsulinism (ortholog); FOUND IN cytoplasm (ortholog); intercalated disc (ortholog); membrane (ortholog) 9 26622813 26679811 - 22301074;30032202 116910012 MODEL JAAIVD010000002;XM_032913799 XP_032769690 alpha-1B adrenergic receptor protein-coding 626164316 LOC116911643 ATP synthase subunit gamma, mitochondrial-like 10 35609984 35610847 - 116911643 MODEL JAAIVD010000005 pseudo 626164317 Cldn1 claudin 1 ENCODES a protein that exhibits identical protein binding (ortholog); virus receptor activity (ortholog); INVOLVED IN bicellular tight junction assembly (ortholog); calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules (ortholog); cell junction maintenance (ortholog); ASSOCIATED WITH Alcoholic Liver Diseases (ortholog); atopic dermatitis (ortholog); Breast Neoplasms (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); bicellular tight junction (ortholog) 4 11169980 11185025 - 22301074;30032202 116898734 MODEL JAAIVD010000003;XM_032900042 XP_032755933 claudin-1 protein-coding 626164325 Emc2 ER membrane protein complex subunit 2 ENCODES a protein that exhibits membrane insertase activity (ortholog); INVOLVED IN protein insertion into ER membrane by stop-transfer membrane-anchor sequence (ortholog); tail-anchored membrane protein insertion into ER membrane (ortholog); FOUND IN cytoplasm (ortholog); EMC complex (ortholog); endoplasmic reticulum (ortholog) 1 218043879 218938126 + 22301074;30032202 116911155 MODEL JAAIVD010000025;XM_032915015 XP_032770906 protein-coding 626164340 Spsb2 splA/ryanodine receptor domain and SOCS box containing 2 ENCODES a protein that exhibits ubiquitin-like ligase-substrate adaptor activity (ortholog); INVOLVED IN protein ubiquitination (ortholog); ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytosol (ortholog) 6 23081585 23084001 - 22301074;30032202 116903274 MODEL JAAIVD010000024;XM_032905690;XM_032905692;XM_032905693 XP_032761581;XP_032761583;XP_032761584 SPRY domain-containing SOCS box protein 2 protein-coding 626164353 LOC116890110 phosphoglycerate mutase 1-like 1 234427772 234428424 - 116890110 MODEL JAAIVD010000025 pseudo 626164354 Stap1 signal transducing adaptor family member 1 ENCODES a protein that exhibits macrophage colony-stimulating factor receptor binding (ortholog); phosphotyrosine residue binding (ortholog); protein kinase binding (ortholog); INVOLVED IN cell surface receptor protein tyrosine kinase signaling pathway (ortholog); cellular response to lipopolysaccharide (ortholog); negative regulation of macrophage chemotaxis (ortholog); ASSOCIATED WITH familial hypercholesterolemia (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 11 461100 490012 + 30032202 116912423 MODEL JAAIVD010000006;XM_032916491 XP_032772382 signal-transducing adaptor protein 1 protein-coding 626164367 Mus81 MUS81 structure-specific endonuclease subunit ENCODES a protein that exhibits 3'-flap endonuclease activity (ortholog); crossover junction DNA endonuclease activity (ortholog); DNA endonuclease activity (ortholog); INVOLVED IN DNA catabolic process (ortholog); DNA repair (ortholog); double-strand break repair (ortholog); ASSOCIATED WITH arterial tortuosity syndrome (ortholog); Marfan syndrome (ortholog); pulmonary emphysema (ortholog); FOUND IN chromosome, telomeric region (ortholog); endodeoxyribonuclease complex (ortholog); Holliday junction resolvase complex (ortholog) 2 2185797 2191341 + 22301074;30032202 116890711 MODEL JAAIVD010000001;XM_032891152;XM_032891153;XM_032891154 XP_032747043;XP_032747044;XP_032747045 crossover junction endonuclease MUS81 protein-coding 626164393 Triap1 TP53 regulated inhibitor of apoptosis 1 ENCODES a protein that exhibits p53 binding (ortholog); phosphatidic acid transfer activity (ortholog); INVOLVED IN cellular response to UV (ortholog); DNA damage response, signal transduction by p53 class mediator (ortholog); mitotic G1 DNA damage checkpoint signaling (ortholog); FOUND IN mitochondrial intermembrane space (ortholog); mitochondrion (ortholog); nucleoplasm (ortholog) 16 38478831 38481575 - 116885970 MODEL JAAIVD010000004;XM_032887307;XM_032887308 XP_032743198;XP_032743199 TP53-regulated inhibitor of apoptosis 1 protein-coding 626164404 LOC116901492 heterogeneous nuclear ribonucleoproteins C1/C2-like 5 47254630 47257119 + 116901492 MODEL JAAIVD010000023 pseudo 626164405 LOC116890609 small nucleolar RNA SNORD75 1 91806542 91806601 - 116890609 MODEL JAAIVD010000025;XR_004386760 snorna 626164408 LOC116907457 olfactory receptor 143-like 8 32012533 32013489 + 22301074;30032202 116907457 MODEL JAAIVD010000027;XM_032910441 XP_032766332 protein-coding 626164412 Igflr1 IGF like family receptor 1 FOUND IN nucleoplasm (ortholog); plasma membrane (ortholog) 2 165442486 165444582 - 116892309 MODEL JAAIVD010000001;XM_032893928;XM_032893929 XP_032749819;XP_032749820 IGF-like family receptor 1 protein-coding 626164422 LOC116887751 small nucleolar RNA U3 18 40036870 40037082 + 116887751 MODEL JAAIVD010000013;XR_004386253 snorna 626164425 LOC116890761 RNA-binding protein 4B-like 2 2896385 2906265 - 22301074;30032202 116890761 MODEL JAAIVD010000001;XM_032891222 XP_032747113 protein-coding 626164433 LOC116885833 F-box only protein 22-like 16 32080264 32082287 + 116885833 MODEL JAAIVD010000004 pseudo 626164434 LOC116908412 small nucleolar RNA SNORA17 8 103459635 103459748 + 116908412 MODEL JAAIVD010000027 pseudo 626164435 Hdgfl3 HDGF like 3 ENCODES a protein that exhibits microtubule binding (ortholog); tubulin binding (ortholog); INVOLVED IN microtubule polymerization (ortholog); negative regulation of microtubule depolymerization (ortholog); neuron projection development (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleoplasm (ortholog) 2 118342227 118390840 + 30032202 116891894 MODEL JAAIVD010000001;XM_032893310 XP_032749201 hepatoma-derived growth factor-related protein 3 protein-coding 626164445 Wfikkn2 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2 ENCODES a protein that exhibits receptor antagonist activity (ortholog); transforming growth factor beta binding (ortholog); INVOLVED IN muscle cell development (ortholog); negative regulation of transforming growth factor beta receptor signaling pathway (ortholog); roof of mouth development (ortholog); FOUND IN extracellular region (ortholog); extracellular space (ortholog) 9 51294988 51300022 + 22301074;30032202 116910133 MODEL JAAIVD010000002;XM_032913969 XP_032769860 WAP, Kazal, immunoglobulin, Kunitz and NTR domain-containing protein 2 protein-coding 626164451 LOC116885511 spindlin-2-like 1 136098847 136099534 + 116885511 MODEL JAAIVD010000025 pseudo 626164452 LOC116894742 splicing factor 3A subunit 1-like 2 113559446 113562184 + 116894742 MODEL JAAIVD010000001 pseudo 626164453 Ca14 carbonic anhydrase 14 ENCODES a protein that exhibits carbonate dehydratase activity (ortholog); ASSOCIATED WITH Zinc Deficiency (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog) 3 61383204 61390435 + 30032202 116896529 MODEL JAAIVD010000012;XM_032897710 XP_032753601 protein-coding 626164468 Trim35 tripartite motif containing 35 INVOLVED IN innate immune response (ortholog); negative regulation of cell population proliferation (ortholog); negative regulation of mitotic cell cycle (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 12 58154307 58169206 - 22301074;30032202 116913091 MODEL JAAIVD010000007;XM_032917226;XM_032917227 XP_032773117;XP_032773118 tripartite motif-containing protein 35 protein-coding 626164482 LOC116907146 tubulin-specific chaperone A-like 8 59526245 59528280 - 116907146 MODEL JAAIVD010000027 pseudo 626164483 LOC116904774 small nucleolar RNA SNORA17 6 42911459 42911569 - 116904774 MODEL JAAIVD010000024 pseudo 626164484 Tmem168 transmembrane protein 168 ENCODES a protein that exhibits sodium channel regulator activity (ortholog); INVOLVED IN regulation of ubiquitin-dependent protein catabolic process (ortholog); FOUND IN nuclear membrane (ortholog); transport vesicle (ortholog) 6 124491271 124516904 - 116904066 MODEL JAAIVD010000024;XM_032906931 XP_032762822 protein-coding 626164493 LOC116902812 heat shock protein HSP 90-alpha-like 6 83918544 83923453 + 116902812 MODEL JAAIVD010000024 pseudo 626164494 LOC116905650 proteasome activator complex subunit 3-like 7 37273998 37274833 + 116905650 MODEL JAAIVD010000026 pseudo 626164495 LOC116915137 small nucleolar RNA SNORA17 13 25150324 25150441 - 116915137 MODEL JAAIVD010000008 pseudo 626164496 LOC116890144 lymphocyte antigen 6B-like 1 247783974 247787507 - 30032202 116890144 MODEL JAAIVD010000025;XM_032890878 XP_032746769 protein-coding 626164503 LOC116898589 ribosomal protein L18-like 4 175515435 175536827 - 116898589 MODEL JAAIVD010000003 pseudo 626164504 Ezh1 enhancer of zeste 1 polycomb repressive complex 2 subunit ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); histone binding (ortholog); INVOLVED IN chromatin remodeling (ortholog); facultative heterochromatin formation (ortholog); hepatocyte homeostasis (ortholog); ASSOCIATED WITH Neurodevelopmental Disorders (ortholog); FOUND IN chromosome, telomeric region (ortholog); ESC/E(Z) complex (ortholog); heterochromatin (ortholog) 9 60488304 60525332 - 22301074;30032202 116910524 MODEL JAAIVD010000002;XM_032914428 XP_032770319 histone-lysine N-methyltransferase EZH1 protein-coding 626164529 Trnak-cuu transfer RNA lysine (anticodon CUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 60802176 60802248 + 116897703 MODEL JAAIVD010000012 trna 626164530 Serpinb1 serpin family B member 1 ENCODES a protein that exhibits peptidase inhibitor activity (ortholog); serine-type endopeptidase inhibitor activity (ortholog); INVOLVED IN cellular homeostasis (ortholog); inflammatory response (ortholog); negative regulation of cell migration (ortholog); FOUND IN cytoplasmic ribonucleoprotein granule (ortholog); extracellular region (ortholog) 14 51877210 51885975 - 30032202 116883709 MODEL JAAIVD010000009;XM_032884923 XP_032740814 leukocyte elastase inhibitor protein-coding 626164541 Lime1 Lck interacting transmembrane adaptor 1 ENCODES a protein that exhibits protein kinase binding (ortholog); INVOLVED IN B cell receptor signaling pathway (ortholog); regulation of canonical NF-kappaB signal transduction (ortholog); regulation of non-canonical NF-kappaB signal transduction (ortholog); FOUND IN B cell receptor complex (ortholog) 5 158475851 158478412 + 22301074;30032202 116902438 MODEL JAAIVD010000023;XM_032904976;XM_032904977 XP_032760867;XP_032760868 lck-interacting transmembrane adapter 1 protein-coding 626164553 Rbm45 RNA binding motif protein 45 ENCODES a protein that exhibits identical protein binding (ortholog); RNA binding (ortholog); INVOLVED IN nervous system development (ortholog); FOUND IN cytoplasm (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 53716223 53730710 + 30032202 116901544 MODEL JAAIVD010000023;XM_032903528 XP_032759419 RNA-binding protein 45 protein-coding 626164567 LOC116883926 non-histone chromosomal protein HMG-17-like 14 7357480 7360553 + 116883926 MODEL JAAIVD010000009 pseudo 626164568 LOC116900113 transcription factor BTF3-like 5 13207841 13208347 + 116900113 MODEL JAAIVD010000023 pseudo 626164569 LOC116913408 ras-specific guanine nucleotide-releasing factor 1 12 5207904 5251036 + 1379346;22301074;30032202 116913408 MODEL JAAIVD010000007;X67241;XM_032917592 CAA47666;XP_032773483 P140 RAS-GRF protein-coding 626164586 Akap13 A-kinase anchoring protein 13 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); MAP-kinase scaffold activity (ortholog); molecular adaptor activity (ortholog); INVOLVED IN adrenergic receptor signaling pathway (ortholog); bone development (ortholog); cardiac muscle cell differentiation (ortholog); PARTICIPATES IN protein kinase A (PKA) signaling pathway; ASSOCIATED WITH Esophageal Neoplasms (ortholog); Prostatic Neoplasms (ortholog); renal cell carcinoma (ortholog); FOUND IN actin cytoskeleton (ortholog); actin filament (ortholog); cell cortex (ortholog) 2 124803974 125095696 - 22301074;30032202 116893240 MODEL JAAIVD010000001;XM_032895110 XP_032751001 A-kinase anchor protein 13 protein-coding 626164626 LOC116883453 prolactin-8A7 14 46400471 46406368 + 22301074;30032202 116883453 MODEL JAAIVD010000009;XM_032884600;XM_032884601;XM_032884602 XP_032740491;XP_032740492;XP_032740493 protein-coding 626164642 Slc6a12 solute carrier family 6 member 12 ENCODES a protein that exhibits gamma-aminobutyric acid:sodium:chloride symporter activity (ortholog); monocarboxylic acid transmembrane transporter activity (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); gamma-aminobutyric acid transport (ortholog); glycine betaine transport (ortholog); ASSOCIATED WITH Neoplasm Invasiveness (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog) 6 25370134 25388048 - 22301074;30032202 116903317 MODEL JAAIVD010000024;XM_032905751 XP_032761642 sodium- and chloride-dependent betaine transporter protein-coding 626164660 LOC116894801 cytochrome c oxidase subunit 8A, mitochondrial ASSOCIATED WITH mitochondrial complex IV deficiency nuclear type 1 (ortholog); mitochondrial complex IV deficiency nuclear type 15 (ortholog); FOUND IN mitochondrial membrane (ortholog); mitochondrion (ortholog) 2 577697 580281 + 22301074;30032202 116894801 MODEL JAAIVD010000001;XM_032896462 XP_032752353 protein-coding 626164666 Stk36 serine/threonine kinase 36 ENCODES a protein that exhibits protein serine/threonine kinase activity (ortholog); transcription corepressor binding (ortholog); INVOLVED IN axoneme assembly (ortholog); brain development (ortholog); cilium assembly (ortholog); PARTICIPATES IN Hedgehog signaling pathway; ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); hydrocephalus (ortholog); Primary Ciliary Dyskinesia 46 (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nucleus (ortholog) 4 148040173 148068089 + 22301074;30032202 116899509 MODEL JAAIVD010000003;XM_032901364 XP_032757255 serine/threonine-protein kinase 36 protein-coding 626164697 LOC116912060 DNA-(apurinic or apyrimidinic site) lyase 2-like 11 97298894 97310202 - 116912060 MODEL JAAIVD010000006 pseudo 626164698 Grb14 growth factor receptor bound protein 14 ENCODES a protein that exhibits molecular adaptor activity (ortholog); phosphoprotein binding (ortholog); protein-macromolecule adaptor activity (ortholog); INVOLVED IN cellular response to insulin stimulus (ortholog); insulin receptor signaling pathway (ortholog); intracellular signal transduction (ortholog); PARTICIPATES IN insulin signaling pathway; ASSOCIATED WITH type 2 diabetes mellitus (ortholog); Weight Gain (ortholog); FOUND IN cytoplasm (ortholog); endosome (ortholog); plasma membrane (ortholog) 5 42404574 42513183 - 30032202 116901458 MODEL JAAIVD010000023;XM_032903402 XP_032759293 growth factor receptor-bound protein 14 protein-coding 626164716 LOC116903194 C-type lectin domain family 2 member D11 6 18527440 18537091 - 30032202 116903194 MODEL JAAIVD010000024;XM_032905570 XP_032761461 protein-coding 626164725 LOC116888320 trafficking protein particle complex subunit 4-like X 65596838 65597601 - 22301074;30032202 116888320 MODEL JAAIVD010000014;XM_032889593 XP_032745484 protein-coding 626164731 Trnay-gua transfer RNA tyrosine (anticodon GUA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 3 134420539 134420632 - 116897702 MODEL JAAIVD010000012 trna 626164732 Ppp1r7 protein phosphatase 1 regulatory subunit 7 ENCODES a protein that exhibits protein phosphatase regulator activity (ortholog); INVOLVED IN chromosome segregation (ortholog); FOUND IN chromosome (ortholog) 4 165278910 165304744 + 22301074 116899661 MODEL JAAIVD010000003;XM_032901671;XM_032901672 XP_032757562;XP_032757563 protein-coding 626164749 Dolpp1 dolichyldiphosphatase 1 ENCODES a protein that exhibits dolichyldiphosphatase activity (ortholog); INVOLVED IN protein N-linked glycosylation (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog) 5 5230301 5238353 - 30032202 116901182 MODEL JAAIVD010000023;XM_032902855 XP_032758746 protein-coding 626164761 Atp11b ATPase phospholipid transporting 11B (putative) FOUND IN early endosome membrane (ortholog); endoplasmic reticulum (ortholog); membrane (ortholog) 3 118111968 118209965 - 22301074;30032202 116896939 MODEL JAAIVD010000012;XM_032898506;XM_032898507;XM_032898508 XP_032754397;XP_032754398;XP_032754399 probable phospholipid-transporting ATPase IF protein-coding 626164804 LOC116897751 uncharacterized LOC116897751 4 2096437 2101636 + 116897751 MODEL JAAIVD010000003 pseudo 626164805 LOC116913606 uncharacterized LOC116913606 12 59242344 59245015 + 116913606 MODEL JAAIVD010000007;XR_004389631 ncrna 626164809 LOC116914138 U1 spliceosomal RNA 12 75557594 75557741 - 116914138 MODEL JAAIVD010000007 pseudo 626164810 Cavin4 caveolae associated protein 4 INVOLVED IN positive regulation of transcription by RNA polymerase II (ortholog); regulation of gene expression (ortholog); FOUND IN caveola (ortholog); plasma membrane (ortholog); sarcoplasm (ortholog) 1 101739029 101748421 + 30032202 116902078 MODEL JAAIVD010000025;XM_032904373 XP_032760264 caveolae-associated protein 4 protein-coding 626164816 LOC116903516 alpha-enolase-like 1 134420995 134422518 + 116903516 MODEL JAAIVD010000025;XR_004388283 pseudo 626164819 LOC116896382 small ubiquitin-related modifier 3-like 1 81742403 81742690 - 116896382 MODEL JAAIVD010000025 pseudo 626164820 Mepe matrix extracellular phosphoglycoprotein INVOLVED IN negative regulation of bone mineralization (ortholog); regulation of bone remodeling (ortholog); ASSOCIATED WITH Bone Fractures (ortholog); osteomalacia (ortholog) 11 14376052 14385593 + 22301074;30032202 116912636 MODEL JAAIVD010000006;XM_032916753;XM_032916754 XP_032772644;XP_032772645 protein-coding 626164827 LOC116900342 olfactory receptor 10AG1-like 5 68907514 68908458 + 22301074 116900342 MODEL JAAIVD010000023;XM_032902095 XP_032757986 protein-coding 626164830 Mbnl1 muscleblind like splicing regulator 1 ENCODES a protein that exhibits double-stranded RNA binding (ortholog); regulatory region RNA binding (ortholog); RNA binding (ortholog); INVOLVED IN alternative mRNA splicing, via spliceosome (ortholog); embryonic limb morphogenesis (ortholog); in utero embryonic development (ortholog); PARTICIPATES IN spliceosome pathway; ASSOCIATED WITH Familial Prostate Cancer (ortholog); Myotonia (ortholog); myotonic disease (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); cytosol (ortholog) 3 94489955 94633867 - 22301074 116896835 MODEL JAAIVD010000012;XM_032898316;XM_032898317;XM_032898318;XM_032898320;XM_032898321;XM_032898322;XM_032898323;XM_032898324;XM_032898325;XM_032898326;XM_032898327;XM_032898328;XM_032898329;XM_032898331 XP_032754207;XP_032754208;XP_032754209;XP_032754211;XP_032754212;XP_032754213;XP_032754214;XP_032754215;XP_032754216;XP_032754217;XP_032754218;XP_032754219;XP_032754220;XP_032754222 muscleblind-like protein 1 protein-coding 626164869 Esr1 estrogen receptor 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); ATPase binding (ortholog); beta-catenin binding (ortholog); INVOLVED IN androgen metabolic process (ortholog); antral ovarian follicle growth (ortholog); baculum development (ortholog); PARTICIPATES IN bisphenol A response pathway; estrogen signaling pathway; follicle-stimulating hormone signaling pathway; ASSOCIATED WITH adenocarcinoma (ortholog); Alzheimer's disease (ortholog); Animal Disease Models (ortholog); FOUND IN chromatin (ortholog); cytoplasm (ortholog); euchromatin (ortholog) 2 197863102 198109021 + 22301074 116892880 MODEL JAAIVD010000001;XM_032894790;XM_032894791 XP_032750681;XP_032750682 estrogen receptor protein-coding 626164888 LOC116908466 olfactory receptor 2Z1 ASSOCIATED WITH prostate cancer (ortholog) 1 159269187 159270135 + 22301074 116908466 MODEL JAAIVD010000025;XM_032911657 XP_032767548 protein-coding 626164891 LOC116910690 small nucleolar RNA SNORA18 9 3358229 3358359 + 116910690 MODEL JAAIVD010000002;XR_004389219 snorna 626164894 LOC116902287 eukaryotic initiation factor 4A-I-like 1 109680524 109681751 + 116902287 MODEL JAAIVD010000025 pseudo 626164895 Calb2 calbindin 2 ENCODES a protein that exhibits calcium ion binding (ortholog); calcium ion binding involved in regulation of presynaptic cytosolic calcium ion concentration (ortholog); INVOLVED IN intracellular calcium ion homeostasis (ortholog); regulation of synaptic plasticity (ortholog); synaptic signaling (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); Endometrial Neoplasms (ortholog); malignant mesothelioma (ortholog); FOUND IN cuticular plate (ortholog); cytosol (ortholog); dendriole (ortholog) 17 29846727 29873200 - 22301074;30032202 116886484 MODEL JAAIVD010000011;XM_032887987 XP_032743878 calretinin protein-coding 626164910 LOC116905675 60S ribosomal protein L6-like 7 49167067 49167989 + 116905675 MODEL JAAIVD010000026 pseudo 626164911 Fbxo41 F-box protein 41 INVOLVED IN chemical synaptic transmission (ortholog); dentate gyrus development (ortholog); gene expression (ortholog) 6 60718320 60729966 + 22301074 116903572 MODEL JAAIVD010000024;XM_032906190 XP_032762081 F-box only protein 41 protein-coding 626164927 Sema3e semaphorin 3E ENCODES a protein that exhibits receptor ligand activity (ortholog); semaphorin receptor binding (ortholog); INVOLVED IN branching involved in blood vessel morphogenesis (ortholog); gonadotrophin-releasing hormone neuronal migration to the hypothalamus (ortholog); negative regulation of angiogenesis (ortholog); ASSOCIATED WITH amenorrhea (ortholog); CHARGE syndrome (ortholog); dilated cardiomyopathy (ortholog) 6 144577088 144827847 + 30032202 116904154 MODEL JAAIVD010000024;XM_032907052 XP_032762943 semaphorin-3E protein-coding 626164948 LOC116905404 zinc finger protein 383-like 7 120339758 120357179 - 30032202 116905404 MODEL JAAIVD010000026;XM_032908362 XP_032764253 protein-coding 626164955 Mbtd1 mbt domain containing 1 ENCODES a protein that exhibits histone H4K20me1 reader activity (ortholog); histone H4K20me2 reader activity (ortholog); INVOLVED IN double-strand break repair via homologous recombination (ortholog); double-strand break repair via nonhomologous end joining (ortholog); embryonic skeletal system development (ortholog); FOUND IN NuA4 histone acetyltransferase complex (ortholog); nucleosome (ortholog); site of double-strand break (ortholog) 9 51581685 51641275 - 22301074 116910138 MODEL JAAIVD010000002;XM_032913976;XM_032913977;XM_032913978;XM_032913979;XM_032913980;XM_032913981;XM_032913982;XM_032913983;XM_032913984;XM_032913985 XP_032769867;XP_032769868;XP_032769869;XP_032769870;XP_032769871;XP_032769872;XP_032769873;XP_032769874;XP_032769875;XP_032769876 MBT domain-containing protein 1 protein-coding 626164998 Tardbp TAR DNA binding protein ENCODES a protein that exhibits DNA binding (ortholog); double-stranded DNA binding (ortholog); identical protein binding (ortholog); INVOLVED IN 3'-UTR-mediated mRNA destabilization (ortholog); 3'-UTR-mediated mRNA stabilization (ortholog); amyloid fibril formation (ortholog); ASSOCIATED WITH Alzheimer's disease (ortholog); amyotrophic lateral sclerosis (ortholog); amyotrophic lateral sclerosis type 1 (ortholog); FOUND IN interchromatin granule (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 1 12147816 12157865 + 22301074;30032202 116892732 MODEL JAAIVD010000025;XM_032894609;XM_032894619;XM_032894630;XM_032894641;XR_004386967;XR_004386969;XR_004386970;XR_004386971 XP_032750500;XP_032750510;XP_032750521;XP_032750532 TAR DNA-binding protein 43 protein-coding 626165023 Apba2 amyloid beta precursor protein binding family A member 2 ENCODES a protein that exhibits amyloid-beta binding (ortholog); identical protein binding (ortholog); INVOLVED IN chemical synaptic transmission (ortholog); in utero embryonic development (ortholog); locomotory behavior (ortholog); ASSOCIATED WITH skin disease (ortholog); FOUND IN presynapse (ortholog); Schaffer collateral - CA1 synapse (ortholog) 2 135700138 135928736 - 22301074;30032202 116892006 MODEL JAAIVD010000001;XM_032893467 XP_032749358 amyloid-beta A4 precursor protein-binding family A member 2 protein-coding 626165042 LOC116908383 small nucleolar RNA SNORA48 8 44643546 44643693 - 116908383 MODEL JAAIVD010000027;XR_004388930 snorna 626165045 LOC116895668 uncharacterized LOC116895668 3 196191739 196223180 - 116895668 MODEL JAAIVD010000012;XR_004387299 ncrna 626165051 LOC116885836 coiled-coil domain-containing protein 121-like 16 41618362 41619927 + 116885836 MODEL JAAIVD010000004;XM_032887175 XP_032743066 protein-coding 626165055 Pabir1 PP2A Aalpha (PPP2R1A) and B55A (PPP2R2A) interacting phosphatase regulator 1 ENCODES a protein that exhibits protein phosphatase 2A binding (ortholog); protein phosphatase inhibitor activity (ortholog); protein serine/threonine phosphatase inhibitor activity (ortholog); INVOLVED IN mitotic G2/M transition checkpoint (ortholog); positive regulation of cell growth (ortholog); positive regulation of proteasomal ubiquitin-dependent protein catabolic process (ortholog); FOUND IN cytoplasm (ortholog); nuclear body (ortholog); nucleoplasm (ortholog) 2 24612160 24613946 - 30032202 116891047 MODEL JAAIVD010000001;XM_032891737 XP_032747628 Fam122a family with sequence similarity 122A;protein FAM122A protein-coding 626165060 LOC116914118 small nucleolar RNA SNORA17 12 85105723 85105854 - 116914118 MODEL JAAIVD010000007;XR_004389682 snorna 626165063 LOC116894844 U6 spliceosomal RNA 2 165794625 165794731 + 116894844 MODEL JAAIVD010000001;XR_004387059 snrna 626165066 LOC116894730 casein kinase II subunit alpha'-like 2 43504599 43505855 + 116894730 MODEL JAAIVD010000001 pseudo 626165067 LOC116887445 RT1 class I histocompatibility antigen, AA alpha chain-like 18 8595658 8598032 - 116887445 MODEL JAAIVD010000013 pseudo 626165068 LOC116910434 DNA replication complex GINS protein SLD5-like 9 27264669 27265326 + 116910434 MODEL JAAIVD010000002 pseudo 626165069 Ndst2 N-deacetylase and N-sulfotransferase 2 ENCODES a protein that exhibits deacetylase activity (ortholog); heparan sulfate N-deacetylase activity (ortholog); heparan sulfate N-sulfotransferase activity (ortholog); INVOLVED IN heparan sulfate proteoglycan biosynthetic process (ortholog); mast cell mediated immunity (ortholog); regulation of angiotensin levels in blood (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN Golgi apparatus (ortholog) 12 90530969 90541119 - 22301074;30032202 116913112 MODEL JAAIVD010000007;XM_032917264 XP_032773155 bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 2 protein-coding 626165088 Rbak RB associated KRAB zinc finger ASSOCIATED WITH prostate cancer (ortholog); FOUND IN nucleoplasm (ortholog) 16 9953818 9967245 + 30032202 116885594 MODEL JAAIVD010000004;XM_032886898;XM_032886899 XP_032742789;XP_032742790 RB-associated KRAB zinc finger protein protein-coding 626165099 Mxd4 MAX dimerization protein 4 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II transcription regulatory region sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN RNA polymerase II transcription regulator complex (ortholog) 11 77054424 77068362 - 22301074;30032202 116912847 MODEL JAAIVD010000006;XM_032917055 XP_032772946 protein-coding 626165109 LOC116906945 uncharacterized LOC116906945 8 11107532 11110748 + 116906945 MODEL JAAIVD010000027;XR_004388784;XR_004388785 ncrna 626165118 LOC116893849 olfactory receptor 13A1-like 2 61265986 61266927 - 22301074 116893849 MODEL JAAIVD010000001;XM_032895569 XP_032751460 protein-coding 626165122 Mical1 microtubule associated monooxygenase, calponin and LIM domain containing 1 ENCODES a protein that exhibits actin binding (ortholog); FAD binding (ortholog); monooxygenase activity (ortholog); INVOLVED IN actin filament depolymerization (ortholog); negative regulation of apoptotic process (ortholog); regulation of regulated secretory pathway (ortholog); ASSOCIATED WITH familial temporal lobe epilepsy 1 (ortholog); temporal lobe epilepsy (ortholog); FOUND IN actin filament (ortholog); ciliary basal body (ortholog); cilium (ortholog) 18 41166818 41179879 + 22301074 116886945 MODEL JAAIVD010000013;XM_032888443;XM_032888444 XP_032744334;XP_032744335 F-actin-monooxygenase MICAL1 protein-coding 626165155 LOC116883866 DNA replication licensing factor MCM7-like 14 20636211 20638481 + 116883866 MODEL JAAIVD010000009 pseudo 626165156 Otog otogelin ENCODES a protein that exhibits structural molecule activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); inner ear receptor cell stereocilium organization (ortholog); intracellular protein localization (ortholog); ASSOCIATED WITH amyotrophic lateral sclerosis type 1 (ortholog); autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 18B (ortholog); FOUND IN cytosol (ortholog); extracellular matrix (ortholog) 2 153191221 153258773 - 22301074;30032202 116894339 MODEL JAAIVD010000001;XM_032896035 XP_032751926 protein-coding 626165216 LOC116897997 triosephosphate isomerase-like 4 59873253 59874016 + 116897997 MODEL JAAIVD010000003 pseudo 626165217 Cpsf6 cleavage and polyadenylation specific factor 6 ENCODES a protein that exhibits exon-exon junction complex binding (ortholog); mRNA binding (ortholog); ribosomal large subunit binding (ortholog); INVOLVED IN co-transcriptional mRNA 3'-end processing, cleavage and polyadenylation pathway (ortholog); mRNA 3'-end processing (ortholog); mRNA alternative polyadenylation (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN cytoplasm (ortholog); interchromatin granule (ortholog); mRNA cleavage and polyadenylation specificity factor complex (ortholog) 1 195463180 195494070 - 30032202 116909260 MODEL JAAIVD010000025;XM_032912787;XM_032912795;XM_032912803;XM_032912811;XM_032912819;XM_032912827 XP_032768678;XP_032768686;XP_032768694;XP_032768702;XP_032768710;XP_032768718 cleavage and polyadenylation specificity factor subunit 6 protein-coding 626165255 Kcnn4 potassium calcium-activated channel subfamily N member 4 ENCODES a protein that exhibits calcium-activated potassium channel activity (ortholog); calmodulin binding (ortholog); intermediate conductance calcium-activated potassium channel activity (ortholog); INVOLVED IN calcium ion transport (ortholog); cardiac muscle hypertrophy (ortholog); cell volume homeostasis (ortholog); PARTICIPATES IN calcium/calcium-mediated signaling pathway; ASSOCIATED WITH Acute Subdural Hematoma (ortholog); angiosarcoma (ortholog); atherosclerosis (ortholog); FOUND IN apical plasma membrane (ortholog); basolateral plasma membrane (ortholog); cytosol (ortholog) 2 170330620 170345812 - 22301074;30032202 116892491 MODEL JAAIVD010000001;XM_032894227;XM_032894228 XP_032750118;XP_032750119 intermediate conductance calcium-activated potassium channel protein 4 protein-coding 626165272 LOC116912454 60S ribosomal protein L35a-like 11 68165420 68165781 + 22301074;30032202 116912454 MODEL JAAIVD010000006;XM_032916521 XP_032772412 protein-coding 626165276 Parl presenilin associated rhomboid like ENCODES a protein that exhibits endopeptidase activity (ortholog); serine-type endopeptidase activity (ortholog); INVOLVED IN membrane protein proteolysis (ortholog); mitochondrial fusion (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); PARTICIPATES IN mitochondrial autophagy pathway; ASSOCIATED WITH breast carcinoma (ortholog); Cachexia (ortholog); coronary artery disease (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 4 5117004 5141758 - 22301074;30032202 116898688 MODEL JAAIVD010000003;XM_032899947 XP_032755838 presenilins-associated rhomboid-like protein, mitochondrial protein-coding 626165290 LOC116885135 60S ribosomal protein L9 1 272042780 272043490 - 22301074;30032202 116885135 MODEL JAAIVD010000025;XM_032886314 XP_032742205 protein-coding 626165295 Senp8 SUMO peptidase family member, NEDD8 specific ASSOCIATED WITH Neurodevelopmental Disorders (ortholog) 8 53574202 53588422 - 22301074;30032202 116906587 MODEL JAAIVD010000027;XM_032909325;XM_032909326 XP_032765216;XP_032765217 sentrin-specific protease 8 protein-coding 626165305 LOC116903202 C-type lectin domain family 2 member D2 6 18924934 18933568 - 30032202 116903202 MODEL JAAIVD010000024;XM_032905579 XP_032761470 protein-coding 626165314 Ccnd2 cyclin D2 ENCODES a protein that exhibits cyclin-dependent protein serine/threonine kinase activator activity (ortholog); protein kinase binding (ortholog); protein serine/threonine kinase activator activity (ortholog); INVOLVED IN adult locomotory behavior (ortholog); cellular response to dexamethasone stimulus (ortholog); cellular response to follicle-stimulating hormone stimulus (ortholog); PARTICIPATES IN G1/S transition pathway; ASSOCIATED WITH acute myeloid leukemia (ortholog); bilateral perisylvian polymicrogyria (ortholog); breast cancer (ortholog); FOUND IN chromatin (ortholog); cyclin D2-CDK4 complex (ortholog); cyclin-dependent protein kinase holoenzyme complex (ortholog) 6 20756156 20780806 + 30032202 116903235 MODEL JAAIVD010000024;XM_032905614 XP_032761505 G1/S-specific cyclin-D2 protein-coding 626165323 Tyw3 tRNA-yW synthesizing protein 3 homolog 3 6853345 6875028 + 30032202 116896138 MODEL JAAIVD010000012;XM_032897122 XP_032753013 tRNA wybutosine-synthesizing protein 3 homolog protein-coding 626165333 Il10 interleukin 10 ENCODES a protein that exhibits cytokine activity (ortholog); interleukin-10 receptor binding (ortholog); protein dimerization activity (ortholog); INVOLVED IN branching involved in labyrinthine layer morphogenesis (ortholog); cellular response to antibiotic (ortholog); cellular response to estradiol stimulus (ortholog); PARTICIPATES IN Interleukin-10 signaling pathway; interleukin-4 signaling pathway; ASSOCIATED WITH abdominal aortic aneurysm (ortholog); Actinic Cheilitis (ortholog); Acute Experimental Pancreatitis (ortholog); FOUND IN extracellular space (ortholog) 10 4795370 4799859 - 22301074 116911526 MODEL JAAIVD010000005;XM_032915519 XP_032771410 interleukin-10 protein-coding 626165342 Noxo1 NADPH oxidase organizer 1 ENCODES a protein that exhibits enzyme binding (ortholog); superoxide-generating NADPH oxidase activator activity (ortholog); INVOLVED IN extracellular matrix disassembly (ortholog); superoxide metabolic process (ortholog); FOUND IN NADPH oxidase complex (ortholog); plasma membrane (ortholog) 9 1981865 1984518 + 22301074;30032202 116909064 MODEL JAAIVD010000002;XM_032912541 XP_032768432 protein-coding 626165354 Omp olfactory marker protein ENCODES a protein that exhibits peptide binding (ortholog); INVOLVED IN neurogenesis (ortholog); sensory perception of smell (ortholog); FOUND IN acrosomal vesicle (ortholog); axon (ortholog); cytoplasm (ortholog) 2 96427315 96430206 - 22301074;30032202 116891710 MODEL JAAIVD010000001;XM_032892981 XP_032748872 protein-coding 626165359 LOC116914279 protein FAM220A-like 13 20124013 20124752 + 116914279 MODEL JAAIVD010000008 pseudo 626165360 Lmf2 lipase maturation factor 2 1 258649680 258654179 - 22301074;30032202 116915058 MODEL JAAIVD010000025;XM_032919478 XP_032775369 protein-coding 626165378 LOC116905283 eukaryotic translation initiation factor 2 subunit 2-like 7 99113950 99115215 + 116905283 MODEL JAAIVD010000026 pseudo 626165379 LOC116890687 uncharacterized LOC116890687 2 1678809 1680066 - 116890687 MODEL JAAIVD010000001;XR_004386777 ncrna 626165383 LOC116903055 vomeronasal type-2 receptor 116-like 6 77195883 77196785 + 22301074;30032202 116903055 MODEL JAAIVD010000024;XM_032905354 XP_032761245 protein-coding 626165386 LOC116911608 prothymosin alpha-like 10 25843425 25843885 - 116911608 MODEL JAAIVD010000005 pseudo 626165387 Unc79 unc-79 subunit of NALCN channel complex INVOLVED IN adult behavior (ortholog); behavioral response to ethanol (ortholog); multicellular organism growth (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); genetic disease (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN plasma membrane (ortholog) 7 114225595 114462099 + 30032202 116905365 MODEL JAAIVD010000026;XM_032908290;XM_032908291;XM_032908292;XM_032908293;XM_032908294;XM_032908296;XM_032908297;XM_032908298;XM_032908299 XP_032764181;XP_032764182;XP_032764183;XP_032764184;XP_032764185;XP_032764187;XP_032764188;XP_032764189;XP_032764190 protein unc-79 homolog;unc-79 homolog, NALCN channel complex subunit protein-coding 626165461 Aagab alpha and gamma adaptin binding protein ASSOCIATED WITH palmoplantar keratosis (ortholog); punctate palmoplantar keratoderma type I (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); nuclear speck (ortholog) 8 57896946 57934899 + 116906624 MODEL JAAIVD010000027;XM_032909383;XM_032909384 XP_032765274;XP_032765275 alpha- and gamma-adaptin-binding protein p34 protein-coding 626165477 LOC116890427 U7 small nuclear RNA 1 232691744 232691808 - 116890427 MODEL JAAIVD010000025;XR_004386625 snrna 626165480 Trnaf-gaa transfer RNA phenylalanine (anticodon GAA) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 14 41349171 41349243 + 116884202 MODEL JAAIVD010000009 trna 626165481 Chst13 carbohydrate sulfotransferase 13 ENCODES a protein that exhibits chondroitin 4-sulfotransferase activity (ortholog); dermatan 4-sulfotransferase activity (ortholog); INVOLVED IN chondroitin sulfate proteoglycan biosynthetic process (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); COVID-19 (ortholog) 6 56584826 56598435 + 22301074;30032202 116902725 MODEL JAAIVD010000024;XM_032905076 XP_032760967 protein-coding 626165488 C14H10orf67 chromosome 14 C10orf67 homolog ASSOCIATED WITH pancreatic agenesis 2 (ortholog) 14 4504192 4641480 + 116883917 MODEL JAAIVD010000009;XM_032885175 XP_032741066 uncharacterized protein C10orf67 homolog, mitochondrial protein-coding 626165509 LOC116893935 40S ribosomal protein S18-like 2 87316845 87317246 + 22301074;30032202 116893935 MODEL JAAIVD010000001;XM_032895656 XP_032751547 protein-coding 626165512 LOC116902999 mitochondrial import inner membrane translocase subunit Tim23-like 6 141879457 141880574 - 22301074;30032202 116902999 MODEL JAAIVD010000024;XM_032905312 XP_032761203 protein-coding 626165517 Tmem253 transmembrane protein 253 12 71884873 71887613 - 116914090 MODEL JAAIVD010000007;XM_032918403 XP_032774294 protein-coding 626165527 LOC116894292 sorting nexin-4-like 2 135267178 135268807 - 116894292 MODEL JAAIVD010000001 pseudo 626165528 LOC116897868 stefin-2-like 4 21192482 21199323 - 22301074;30032202 116897868 MODEL JAAIVD010000003;XM_032899274;XM_032899275 XP_032755165;XP_032755166 protein-coding 626165536 Ap1m1 adaptor related protein complex 1 subunit mu 1 INVOLVED IN endosome to melanosome transport (ortholog); melanosome organization (ortholog); PARTICIPATES IN E-cadherin signaling pathway; FOUND IN cytosol (ortholog); synapse (ortholog) 13 14060621 14075939 + 22301074;30032202 116914596 MODEL JAAIVD010000008;XM_032918957 XP_032774848 AP-1 complex subunit mu-1 protein-coding 626165552 LOC116900634 protein ecdysoneless homolog 5 110029280 110035218 - 116900634 MODEL JAAIVD010000023 pseudo 626165553 LOC116890825 actin-like 2 5822446 5849198 - 116890825 MODEL JAAIVD010000001;XM_032891334;XM_032891335 XP_032747225;XP_032747226 protein-coding 626165570 B4galt3 beta-1,4-galactosyltransferase 3 ENCODES a protein that exhibits galactosyltransferase activity (ortholog); INVOLVED IN galactosylceramide biosynthetic process (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog) 10 50435667 50441845 + 22301074;30032202 116911156 MODEL JAAIVD010000005;XM_032915016;XM_032915017;XM_032915018 XP_032770907;XP_032770908;XP_032770909 protein-coding 626165587 LOC116887898 14-3-3 protein sigma-like X 51935743 51937896 - 116887898 MODEL JAAIVD010000014 pseudo 626165588 LOC116913703 apolipoprotein L3-like 1 249786376 249790798 - 22301074;30032202 116913703 MODEL JAAIVD010000025;XM_032918002 XP_032773893 protein-coding 626165595 LOC116909201 10 kDa heat shock protein, mitochondrial-like 9 87765792 87766098 - 116909201 MODEL JAAIVD010000002 pseudo 626165596 LOC116890030 40S ribosomal protein S12-like 1 197300025 197300423 + 116890030 MODEL JAAIVD010000025 pseudo 626165597 Med23 mediator complex subunit 23 ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN positive regulation of gene expression (ortholog); positive regulation of T cell extravasation (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; ASSOCIATED WITH autosomal recessive intellectual developmental disorder 18 (ortholog); Fraser syndrome 3 (ortholog); genetic disease (ortholog); FOUND IN core mediator complex (ortholog); mediator complex (ortholog); nucleus (ortholog) 2 210924082 210967667 + 30032202 116892950 MODEL JAAIVD010000001;XM_032894898;XM_032894899 XP_032750789;XP_032750790 mediator of RNA polymerase II transcription subunit 23 protein-coding 626165634 LOC116900810 T-complex protein 1 subunit theta-like 5 29721951 29726884 + 116900810 MODEL JAAIVD010000023 pseudo 626165635 Pate2 prostate and testis expressed 2 FOUND IN extracellular space (ortholog) 8 31200872 31202296 + 30032202 116907750 MODEL JAAIVD010000027;XM_032910887 XP_032766778 prostate and testis expressed protein 2 protein-coding 626165641 LOC116883325 RISC-loading complex subunit TARBP2-like 1 260559838 260565134 - 116883325 MODEL JAAIVD010000025;XM_032884398 XP_032740289 protein-coding 626165653 LOC116901375 cytochrome c, somatic-like 5 16876275 16877180 - 116901375 MODEL JAAIVD010000023 pseudo 626165654 Mtrex Mtr4 exosome RNA helicase ENCODES a protein that exhibits ATP binding (ortholog); RNA helicase activity (ortholog); INVOLVED IN DNA damage response (ortholog); maturation of 5.8S rRNA (ortholog); RNA catabolic process (ortholog); PARTICIPATES IN ribosome biogenesis pathway; ASSOCIATED WITH amyotrophic lateral sclerosis (ortholog); Marfanoid Mental Retardation Syndrome, Autosomal (ortholog); FOUND IN catalytic step 2 spliceosome (ortholog); exosome (RNase complex) (ortholog); nuclear exosome (RNase complex) (ortholog) 3 183866245 183925789 + 22301074;30032202 116897186 MODEL JAAIVD010000012;XM_032898877 XP_032754768 exosome RNA helicase MTR4 protein-coding 626165685 Cat catalase ENCODES a protein that exhibits aminoacylase activity (ortholog); antioxidant activity (ortholog); catalase activity (ortholog); INVOLVED IN aerobic respiration (ortholog); cellular detoxification of hydrogen peroxide (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN disulfiram pharmacodynamics pathway; tryptophan metabolic pathway; ASSOCIATED WITH Abnormalities, Drug-Induced (ortholog); acatalasia (ortholog); acne (ortholog); FOUND IN catalase complex (ortholog); extracellular space (ortholog); peroxisomal matrix (ortholog) 5 81288678 81319821 - 22301074;30032202 116901686 MODEL JAAIVD010000023;XM_032903812 XP_032759703 protein-coding 626165701 LOC116888864 structural maintenance of chromosomes protein 1A-like X 13207503 13212071 + 22301074;30032202 116888864 MODEL JAAIVD010000014;XM_032890128 XP_032746019 protein-coding 626165711 Dynlt2 dynein light chain Tctex-type 2 INVOLVED IN microtubule-based movement (ortholog); FOUND IN cytoplasmic dynein complex (ortholog); cytosol (ortholog); membrane (ortholog) 14 959785 972117 + 30032202 116883915 MODEL JAAIVD010000009;XM_032885173;XM_032885174 XP_032741064;XP_032741065 Tcte3 t-complex-associated-testis-expressed 3;tctex1 domain-containing protein 3 protein-coding 626165719 LOC116897782 uncharacterized LOC116897782 4 3309701 3313550 + 116897782 MODEL JAAIVD010000003;XR_004387625 ncrna 626165724 LOC116901662 olfactory receptor 142 5 71812991 71823152 - 22301074 116901662 MODEL JAAIVD010000023;XM_032903778;XM_032903779 XP_032759669;XP_032759670 protein-coding 626165730 LOC116891938 peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like 2 120541615 120541921 - 116891938 MODEL JAAIVD010000001 pseudo 626165731 LOC116886295 bcl-2-like protein 1 17 16422457 16423253 - 30032202 116886295 MODEL JAAIVD010000011;XM_032887731 XP_032743622 protein-coding 626165735 Mapk9 mitogen-activated protein kinase 9 ENCODES a protein that exhibits ATP binding (ortholog); JUN kinase activity (ortholog); mitogen-activated protein kinase kinase kinase binding (ortholog); INVOLVED IN cellular hyperosmotic response (ortholog); cellular response to amyloid-beta (ortholog); cellular response to growth factor stimulus (ortholog); PARTICIPATES IN c-Jun N-terminal kinases MAPK signaling pathway; FasL mediated signaling pathway; glypican signaling pathway; ASSOCIATED WITH Alzheimer's disease (ortholog); Animal Disease Models (ortholog); arteriosclerosis (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); mitochondrion (ortholog) 9 32516137 32557472 + 22301074;30032202 116910533 MODEL JAAIVD010000002;XM_032914437;XM_032914438;XM_032914439;XM_032914440;XM_032914441 XP_032770328;XP_032770329;XP_032770330;XP_032770331;XP_032770332 protein-coding 626165761 LOC116899594 60S ribosomal protein L39-like 4 158712361 158712508 + 116899594 MODEL JAAIVD010000003 pseudo 626165762 Hjurp Holliday junction recognition protein ENCODES a protein that exhibits histone binding (ortholog); identical protein binding (ortholog); INVOLVED IN CENP-A containing chromatin assembly (ortholog); chromosome segregation (ortholog); regulation of protein-containing complex assembly (ortholog); PARTICIPATES IN histone modification pathway; ASSOCIATED WITH COVID-19 (ortholog); hepatocellular carcinoma (ortholog); FOUND IN chromosome, centromeric region (ortholog); cytosol (ortholog); kinetochore (ortholog) 4 160299297 160312667 - 22301074;30032202 116899624 MODEL JAAIVD010000003;XM_032901587 XP_032757478 protein-coding 626165774 LOC116883343 N-acetyllactosaminide beta-1,6-N-acetylglucosaminyl-transferase-like 14 59908684 59949691 + 22301074;30032202 116883343 MODEL JAAIVD010000009;XM_032884419 XP_032740310 protein-coding 626165781 Efnb1 ephrin B1 ENCODES a protein that exhibits ephrin receptor binding (ortholog); INVOLVED IN axon guidance (ortholog); embryonic pattern specification (ortholog); nervous system development (ortholog); PARTICIPATES IN ephrin - ephrin receptor bidirectional signaling axis; ASSOCIATED WITH craniofrontonasal syndrome (ortholog); craniosynostosis (ortholog); dysostosis (ortholog); FOUND IN cell surface (ortholog); cytoplasm (ortholog); glutamatergic synapse (ortholog) X 57134561 57147507 + 22301074;30032202 116888667 MODEL JAAIVD010000014;XM_032889965 XP_032745856 ephrin-B1 protein-coding 626165790 LOC116898437 uncharacterized LOC116898437 4 93227497 93228289 - 116898437 MODEL JAAIVD010000003 pseudo 626165791 Fibin fin bud initiation factor homolog ENCODES a protein that exhibits protein homodimerization activity (ortholog); ASSOCIATED WITH diastolic heart failure (ortholog); FOUND IN endoplasmic reticulum (ortholog) 5 88659731 88661996 - 116900532 MODEL JAAIVD010000023;XM_032902259 XP_032758150 protein-coding 626165796 Syt3 synaptotagmin 3 ENCODES a protein that exhibits calcium-dependent phospholipid binding (ortholog); clathrin binding (ortholog); identical protein binding (ortholog); INVOLVED IN positive regulation of dendrite extension (ortholog); positive regulation of vesicle fusion (ortholog); regulation of calcium ion-dependent exocytosis (ortholog); FOUND IN endosome (ortholog); postsynapse (ortholog); synaptic membrane (ortholog) 2 155130763 155145519 - 22301074;30032202 116892214 MODEL JAAIVD010000001;XM_032893773;XM_032893774;XM_032893775 XP_032749664;XP_032749665;XP_032749666 synaptotagmin-3 protein-coding 626165816 Zfand5 zinc finger AN1-type containing 5 INVOLVED IN face development (ortholog); fibroblast migration (ortholog); in utero embryonic development (ortholog); ASSOCIATED WITH Prostatic Neoplasms (ortholog) 2 21349707 21359533 + 22301074 116891027 MODEL JAAIVD010000001;XM_032891709 XP_032747600 AN1-type zinc finger protein 5 protein-coding 626165826 LOC116887914 disks large-associated protein 4-like X 54798038 54799348 - 116887914 MODEL JAAIVD010000014 pseudo 626165827 LOC116897741 uncharacterized LOC116897741 4 42510 47356 + 116897741 MODEL JAAIVD010000003 pseudo 626165828 LOC116900315 olfactory receptor 8I2 5 64169608 64170540 - 22301074;30032202 116900315 MODEL JAAIVD010000023;XM_032902072 XP_032757963 protein-coding 626165831 LOC116888925 replication protein A 30 kDa subunit-like X 83090424 83091135 - 116888925 MODEL JAAIVD010000014 pseudo 626165832 Znf185 zinc finger protein 185 with LIM domain ASSOCIATED WITH autistic disorder (ortholog) X 129365241 129406713 - 116889218 MODEL JAAIVD010000014;XM_032890368 XP_032746259 zinc finger protein 185 protein-coding 626165855 LOC116906039 ubiquitin-conjugating enzyme E2 E1-like 7 40962040 40989862 + 116906039 MODEL JAAIVD010000026 pseudo 626165856 LOC116898514 partner of Y14 and mago-like 4 132836814 132837547 + 116898514 MODEL JAAIVD010000003 pseudo 626165857 Ascl4 achaete-scute family bHLH transcription factor 4 1 162681110 162682501 - 22301074;30032202 116889971 MODEL JAAIVD010000025;XM_032890766 XP_032746657 achaete-scute homolog 4 protein-coding 626165862 Ckb creatine kinase B ENCODES a protein that exhibits creatine kinase activity (ortholog); ubiquitin protein ligase binding (ortholog); INVOLVED IN cellular response to estrogen stimulus (ortholog); cellular response to wortmannin (ortholog); cerebellum development (ortholog); PARTICIPATES IN AGAT deficiency pathway; arginine and proline metabolic pathway; guanidinoacetate methyltransferase deficiency pathway; ASSOCIATED WITH Acute Coronary Syndrome (ortholog); adenocarcinoma (ortholog); Chemical and Drug Induced Liver Injury (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); mitochondrion (ortholog) 7 129265768 129268659 - 30032202 116905494 MODEL JAAIVD010000026;XM_032908500 XP_032764391 creatine kinase B-type protein-coding 626165874 LOC116909056 DNA-directed RNA polymerases I, II, and III subunit RPABC5-like 9 61048758 61049996 - 116909056 MODEL JAAIVD010000002 pseudo 626165875 LOC116889203 cancer/testis antigen family 45 member A1-like X 116696268 116701147 - 30032202 116889203 MODEL JAAIVD010000014;XM_032890359;XR_004386366;XR_004386367 XP_032746250 protein-coding 626165887 LOC116890509 small nucleolar RNA SNORA48 1 121703754 121703893 - 116890509 MODEL JAAIVD010000025;XR_004386693 snorna 626165890 LOC116891802 decreased expression in renal and prostate cancer protein-like 2 102451084 102453271 - 116891802 MODEL JAAIVD010000001;XR_004386862 pseudo 626165893 Tcof1 treacle ribosome biogenesis factor 1 ENCODES a protein that exhibits protein heterodimerization activity (ortholog); protein-macromolecule adaptor activity (ortholog); scaffold protein binding (ortholog); INVOLVED IN neural crest cell development (ortholog); neural crest formation (ortholog); nucleolar large rRNA transcription by RNA polymerase I (ortholog); ASSOCIATED WITH Craniofacial Abnormalities (ortholog); genetic disease (ortholog); Hearing Loss (ortholog); FOUND IN cytosol (ortholog); fibrillar center (ortholog); nucleolus (ortholog) 15 71099779 71131148 + 22301074 116884578 MODEL JAAIVD010000010;XM_032885720 XP_032741611 treacle protein protein-coding 626165923 LOC116911936 40S ribosomal protein S25-like 11 13287454 13287988 - 116911936 MODEL JAAIVD010000006 pseudo 626165924 LOC116883564 histone H2A type 1-E 14 42739970 42740638 - 22301074;30032202 116883564 MODEL JAAIVD010000009;XM_032884745 XP_032740636 protein-coding 626165929 LOC116893628 ubiquinol-cytochrome-c reductase complex assembly factor 3 ENCODES a protein that exhibits cardiolipin binding (ortholog); phosphatidic acid binding (ortholog); INVOLVED IN cristae formation (ortholog); mitochondrial electron transport, ubiquinol to cytochrome c (ortholog); mitochondrial respiratory chain complex III assembly (ortholog); ASSOCIATED WITH mitochondrial complex III deficiency nuclear type 1 (ortholog); mitochondrial complex III deficiency nuclear type 9 (ortholog); FOUND IN cytosol (ortholog); mitochondrial inner membrane (ortholog); mitochondrion (ortholog) 2 9063857 9064655 + 22301074;30032202 116893628 MODEL JAAIVD010000001;XM_032895342 XP_032751233 protein-coding 626165935 LOC116897585 small nucleolar RNA SNORA17 3 150767883 150767995 + 116897585 MODEL JAAIVD010000012 pseudo 626165936 Bmp1 bone morphogenetic protein 1 ENCODES a protein that exhibits identical protein binding (ortholog); metalloendopeptidase activity (ortholog); peptidase activity (ortholog); INVOLVED IN positive regulation of cartilage development (ortholog); proteolysis (ortholog); ASSOCIATED WITH Acute Otitis Media (ortholog); genetic disease (ortholog); osteogenesis imperfecta (ortholog); FOUND IN extracellular space (ortholog); vesicle (ortholog) 12 53831752 53876641 + 22301074;30032202 116913405 MODEL JAAIVD010000007;XM_032917586;XM_032917587;XM_032917589;XM_032917590 XP_032773477;XP_032773478;XP_032773480;XP_032773481 protein-coding 626165974 LOC116902803 vomeronasal type-1 receptor 48-like 6 83707711 83708649 - 22301074;30032202 116902803 MODEL JAAIVD010000024;XM_032905138 XP_032761029 protein-coding 626165977 LOC116891812 protein FAM111A-like 2 12571347 12585136 - 116891812 MODEL JAAIVD010000001 pseudo 626165978 LOC116883173 aldo-keto reductase family 1 member C1 homolog 14 18505961 18536526 - 30032202 116883173 MODEL JAAIVD010000009;XM_032884208;XM_032884209 XP_032740099;XP_032740100 aldo-keto reductase family 1 member C13-like protein-coding 626165997 Pou6f1 POU class 6 homeobox 1 ENCODES a protein that exhibits DNA binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); FOUND IN actin cytoskeleton (ortholog); nuclear body (ortholog); nucleus (ortholog) 1 262511686 262532648 + 30032202 116883976 MODEL JAAIVD010000025;XM_032885211;XM_032885219;XM_032885225 XP_032741102;XP_032741110;XP_032741116 POU domain, class 6, transcription factor 1 protein-coding 626166019 Tead2 TEA domain transcription factor 2 ENCODES a protein that exhibits disordered domain specific binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN cellular response to retinoic acid (ortholog); embryonic heart tube morphogenesis (ortholog); hippo signaling (ortholog); ASSOCIATED WITH polycystic ovary syndrome (ortholog); FOUND IN cytosol (ortholog); nucleoplasm (ortholog); TEAD-YAP complex (ortholog) 2 154306142 154323659 - 22301074;30032202 116892160 MODEL JAAIVD010000001;XM_032893656 XP_032749547 transcriptional enhancer factor TEF-4 protein-coding 626166035 LOC116900679 cystatin-related protein 2-like 5 128626838 128636640 + 30032202 116900679 MODEL JAAIVD010000023;XM_032902383 XP_032758274 protein-coding 626166041 LOC116887333 olfactory receptor 2B11-like 18 10975650 10976588 + 22301074 116887333 MODEL JAAIVD010000013;XM_032888926 XP_032744817 protein-coding 626166044 LOC116890466 small nucleolar RNA SNORA15 1 127947936 127948065 - 116890466 MODEL JAAIVD010000025;XR_004386657 snorna 626166047 LOC116907727 cytoplasmic dynein 2 heavy chain 1-like 8 4382334 4403932 + 116907727 MODEL JAAIVD010000027;XM_032910853 XP_032766744 protein-coding 626166064 LOC116887562 40S ribosomal protein S6-like 18 24862815 24863539 - 116887562 MODEL JAAIVD010000013 pseudo 626166065 LOC116894351 kallikrein-1-like 2 155303684 155307897 - 22301074;30032202 116894351 MODEL JAAIVD010000001;XM_032896050 XP_032751941 protein-coding 626166074 LOC116906832 olfactory receptor 1078 1 156737631 156738626 - 22301074;30032202 116906832 MODEL JAAIVD010000025;XM_032909720 XP_032765611 protein-coding 626166078 Rnf135 ring finger protein 135 ENCODES a protein that exhibits identical protein binding (ortholog); ribonucleoprotein complex binding (ortholog); RIG-I binding (ortholog); INVOLVED IN antiviral innate immune response (ortholog); free ubiquitin chain polymerization (ortholog); positive regulation of interferon-beta production (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); chromosome 17q11.2 deletion syndrome (ortholog); Growth Disorders (ortholog); FOUND IN cytoplasm (ortholog); cytoplasmic stress granule (ortholog); ribonucleoprotein complex (ortholog) 9 90226364 90242387 - 22301074;30032202 116909922 MODEL JAAIVD010000002;XM_032913686 XP_032769577 E3 ubiquitin-protein ligase RNF135 protein-coding 626166087 LOC116903132 olfactory receptor 6C3-like 6 7804061 7804996 - 22301074;30032202 116903132 MODEL JAAIVD010000024;XM_032905488 XP_032761379 protein-coding 626166090 Mogat3 monoacylglycerol O-acyltransferase 3 ENCODES a protein that exhibits 2-acylglycerol O-acyltransferase activity (ortholog); diacylglycerol O-acyltransferase activity (ortholog); INVOLVED IN monoacylglycerol biosynthetic process (ortholog); triglyceride biosynthetic process (ortholog); FOUND IN endoplasmic reticulum membrane (ortholog); perinuclear endoplasmic reticulum membrane (ortholog) 16 17014900 17016899 - 30032202 116885908 MODEL JAAIVD010000004;XM_032887223 XP_032743114 2-acylglycerol O-acyltransferase 3 protein-coding 626166099 Ppfibp2 PPFIB scaffold protein 2 ENCODES a protein that exhibits identical protein binding (ortholog); ASSOCIATED WITH Familial Prostate Cancer (ortholog); Prostatic Neoplasms (ortholog); FOUND IN presynapse (ortholog) 2 105703720 105852915 + 22301074;30032202 116891835 MODEL JAAIVD010000001;XM_032893203 XP_032749094 PPFIA binding protein 2;liprin-beta-2 protein-coding 626166128 Trnai-aau transfer RNA isoleucine (anticodon AAU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 7 128414395 128414468 + 116906528 MODEL JAAIVD010000026 trna 626166129 Mtmr11 myotubularin related protein 11 FOUND IN cytoplasm (ortholog) 3 61110931 61119360 - 116896524 MODEL JAAIVD010000012;XM_032897706 XP_032753597 myotubularin-related protein 11 protein-coding 626166150 Rnf150 ring finger protein 150 17 17131998 17358526 - 116886287 MODEL JAAIVD010000011;XM_032887717 XP_032743608 protein-coding 626166161 LOC116913942 40S ribosomal protein S17-like 12 69623382 69623789 - 116913942 MODEL JAAIVD010000007 pseudo 626166162 Znf180 zinc finger protein 180 2 170606205 170622805 - 30032202 116892518 MODEL JAAIVD010000001;XM_032894274 XP_032750165 protein-coding 626166170 Cd3d CD3d molecule ENCODES a protein that exhibits identical protein binding (ortholog); INVOLVED IN positive thymic T cell selection (ortholog); PARTICIPATES IN interleukin-12 signaling pathway; ASSOCIATED WITH allergic contact dermatitis (ortholog); genetic disease (ortholog); immunodeficiency 19 (ortholog); FOUND IN alpha-beta T cell receptor complex (ortholog); plasma membrane (ortholog); T cell receptor complex (ortholog) 8 39511288 39515901 + 22301074;30032202 116907470 MODEL JAAIVD010000027;XM_032910455 XP_032766346 T-cell surface glycoprotein CD3 delta chain protein-coding 626166179 Tnn tenascin N ENCODES a protein that exhibits identical protein binding (ortholog); integrin binding (ortholog); INVOLVED IN axonogenesis (ortholog); cell-matrix adhesion (ortholog); dendrite self-avoidance (ortholog); FOUND IN CA3 pyramidal cell dendrite (ortholog); cell surface (ortholog); extracellular matrix (ortholog) 10 39371084 39438157 - 22301074 116911163 MODEL JAAIVD010000005;XM_032915025 XP_032770916 tenascin-N protein-coding 626166206 LOC116900159 glyceraldehyde-3-phosphate dehydrogenase-like 5 25026818 25027812 + 116900159 MODEL JAAIVD010000023 pseudo 626166207 Cgref1 cell growth regulator with EF-hand domain 1 INVOLVED IN negative regulation of cell growth (ortholog); ASSOCIATED WITH Liver Neoplasms (ortholog) 7 23147091 23150440 + 22301074 116905992 MODEL JAAIVD010000026;XM_032909021 XP_032764912 cell growth regulator with EF hand domain protein 1 protein-coding 626166216 LOC116887112 keratin-associated protein 12-1-like 18 1049219 1049578 + 22301074 116887112 MODEL JAAIVD010000013;XM_032888653;XM_032888655 XP_032744544;XP_032744546 protein-coding 626166222 LOC116883445 cytidine monophosphate-N-acetylneuraminic acid hydroxylase 14 43488196 43545526 + 22301074 116883445 MODEL JAAIVD010000009;XM_032884590;XM_032884591;XM_032884592 XP_032740481;XP_032740482;XP_032740483 protein-coding 626166246 Aebp1 AE binding protein 1 ENCODES a protein that exhibits carboxypeptidase activity (ortholog); collagen binding (ortholog); DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); INVOLVED IN negative regulation of transcription by RNA polymerase II (ortholog); regulation of collagen fibril organization (ortholog); regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); Ehlers-Danlos syndrome classic type 1 (ortholog); Ehlers-Danlos syndrome classic type 2 (ortholog) 11 74819221 74829404 + 22301074;30032202 116912487 MODEL JAAIVD010000006;XM_032916562 XP_032772453 adipocyte enhancer-binding protein 1 protein-coding 626166271 LOC116884977 60S ribosomal protein L29-like 15 19473479 19473973 - 22301074;30032202 116884977 MODEL JAAIVD010000010;XM_032886198 XP_032742089 protein-coding 626166275 LOC116911642 deoxyuridine 5'-triphosphate nucleotidohydrolase-like 10 35006741 35033413 - 116911642 MODEL JAAIVD010000005 pseudo 626166276 LOC116911412 integral membrane protein 2A-like 1 164970006 164973504 - 116911412 MODEL JAAIVD010000025 pseudo 626166277 Btbd8 BTB domain containing 8 INVOLVED IN synaptic vesicle budding from endosome (ortholog); synaptic vesicle endocytosis (ortholog); FOUND IN AP-2 adaptor complex (ortholog); extrinsic component of synaptic vesicle membrane (ortholog); neuron projection terminus (ortholog) 11 17209392 17281114 + 22301074;30032202 116912393 MODEL JAAIVD010000006;XM_032916450 XP_032772341 BTB/POZ domain-containing protein 8 protein-coding 626166299 Cpsf4 cleavage and polyadenylation specific factor 4 ENCODES a protein that exhibits sequence-specific double-stranded DNA binding (ortholog); PARTICIPATES IN 3'-end pre-mRNA processing pathway; RNA polymerase II transcription termination pathway; FOUND IN mRNA cleavage and polyadenylation specificity factor complex (ortholog); nucleoplasm (ortholog) 16 8114309 8130130 - 22301074;30032202 116885662 MODEL JAAIVD010000004;XM_032886966;XM_032886967;XM_032886968;XM_032886969 XP_032742857;XP_032742858;XP_032742859;XP_032742860 cleavage and polyadenylation specificity factor subunit 4 protein-coding 626166318 Cxcr6 C-X-C motif chemokine receptor 6 ENCODES a protein that exhibits C-X-C chemokine binding (ortholog); C-X-C chemokine receptor activity (ortholog); ASSOCIATED WITH systemic scleroderma (ortholog) 8 114913901 114919118 + 22301074;30032202 116908031 A0A6M4C4L5 MODEL JAAIVD010000027;XM_032911299 XP_032767190 C-X-C chemokine receptor type 6 protein-coding 626166324 Fap fibroblast activation protein alpha ENCODES a protein that exhibits dipeptidyl-peptidase activity (ortholog); endopeptidase activity (ortholog); identical protein binding (ortholog); INVOLVED IN endothelial cell migration (ortholog); melanocyte apoptotic process (ortholog); melanocyte proliferation (ortholog); ASSOCIATED WITH esophagus squamous cell carcinoma (ortholog); lung non-small cell carcinoma (ortholog); lung squamous cell carcinoma (ortholog); FOUND IN apical part of cell (ortholog); basal part of cell (ortholog); cell surface (ortholog) 5 40086998 40144975 - 22301074;30032202 116900820 MODEL JAAIVD010000023;XM_032902527 XP_032758418 prolyl endopeptidase FAP protein-coding 626166352 Trnaq-cug transfer RNA glutamine (anticodon CUG) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48724508 48724579 - 116910840 MODEL JAAIVD010000002 trna 626166353 Otub1 OTU deubiquitinase, ubiquitin aldehyde binding 1 ENCODES a protein that exhibits cysteine-type deubiquitinase activity (ortholog); deNEDDylase activity (ortholog); ubiquitin binding (ortholog); INVOLVED IN cellular response to interleukin-1 (ortholog); cellular response to nutrient levels (ortholog); DNA damage response (ortholog); PARTICIPATES IN ataxia telangiectasia-mutated (ATM) signaling pathway; ASSOCIATED WITH IgA glomerulonephritis (ortholog); lupus nephritis (ortholog) 2 586790 595191 + 30032202 116894800 MODEL JAAIVD010000001;XM_032896461 XP_032752352 ubiquitin thioesterase OTUB1 protein-coding 626166364 LOC116888782 60S ribosomal protein L22-like 1 X 3041717 3042080 + 116888782 MODEL JAAIVD010000014 pseudo 626166365 LOC116888303 gap junction alpha-6 protein X 32266864 32270761 - 22301074;30032202 116888303 MODEL JAAIVD010000014;XM_032889577 XP_032745468 protein-coding 626166370 LOC116904901 glycogen [starch] synthase, muscle-like 7 755826 757931 - 116904901 MODEL JAAIVD010000026 pseudo 626166371 LOC116900304 olfactory receptor 5T3-like 5 63913810 63914778 + 22301074;30032202 116900304 MODEL JAAIVD010000023;XM_032902060 XP_032757951 protein-coding 626166374 Trim69 tripartite motif containing 69 ENCODES a protein that exhibits identical protein binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN centrosome cycle (ortholog); centrosome separation (ortholog); protein localization to centrosome (ortholog); ASSOCIATED WITH multisystem inflammatory syndrome in children (ortholog); FOUND IN centrosome (ortholog); cytoplasm (ortholog); nuclear speck (ortholog) 5 100272420 100290250 + 22301074 116901882 MODEL JAAIVD010000023;XM_032904089 XP_032759980 E3 ubiquitin-protein ligase TRIM69 protein-coding 626166385 Abcb8 ATP binding cassette subfamily B member 8 ENCODES a protein that exhibits ATP binding (ortholog); INVOLVED IN cell volume homeostasis (ortholog); mitochondrial potassium ion transmembrane transport (ortholog); potassium ion transmembrane transport (ortholog); ASSOCIATED WITH Recurrence (ortholog); Thyroid Neoplasms (ortholog); FOUND IN mitochondrial ATP-gated potassium channel complex (ortholog); mitochondrial inner membrane (ortholog); mitochondrial membrane (ortholog) 6 153587929 153602775 + 22301074;30032202 116904203 MODEL JAAIVD010000024;XM_032907118 XP_032763009 mitochondrial potassium channel ATP-binding subunit protein-coding 626166405 LOC116888685 selenoprotein K-like X 65975911 65976379 + 116888685 MODEL JAAIVD010000014 pseudo 626166406 LOC116883206 histone H2B type 1-H-like 14 41978081 41978524 + 116883206 MODEL JAAIVD010000009 pseudo 626166407 LOC116892070 protein kinase C-binding protein NELL1-like 2 149765651 149859483 - 116892070 MODEL JAAIVD010000001;XM_032893540 XP_032749431 protein-coding 626166414 Mertk MER proto-oncogene, tyrosine kinase INVOLVED IN apoptotic cell clearance (ortholog); establishment of localization in cell (ortholog); natural killer cell differentiation (ortholog); ASSOCIATED WITH carcinoma (ortholog); cone-rod dystrophy (ortholog); COVID-19 (ortholog); FOUND IN cytoplasm (ortholog); extracellular space (ortholog); photoreceptor outer segment (ortholog) 5 107517629 107592119 + 22301074;30032202 116900971 MODEL JAAIVD010000023;XM_032902600 XP_032758491 tyrosine-protein kinase Mer protein-coding 626166435 LOC116887553 rano class II histocompatibility antigen, A beta chain 18 7955677 7960787 - 22301074;30032202 116887553 MODEL JAAIVD010000013;XM_032889183 XP_032745074 protein-coding 626166444 Cep131 centrosomal protein 131 ENCODES a protein that exhibits protein homodimerization activity (ortholog); protein-containing complex binding (ortholog); INVOLVED IN intraciliary transport (ortholog); intraciliary transport involved in cilium assembly (ortholog); intramanchette transport (ortholog); ASSOCIATED WITH hepatocellular carcinoma (ortholog); FOUND IN acrosomal vesicle (ortholog); centriolar satellite (ortholog); centrosome (ortholog) 9 63927275 63951073 + 30032202 116910214 MODEL JAAIVD010000002;XM_032914101 XP_032769992 centrosomal protein of 131 kDa protein-coding 626166474 Slc41a1 solute carrier family 41 member 1 ENCODES a protein that exhibits inorganic cation transmembrane transporter activity (ortholog); magnesium ion transmembrane transporter activity (ortholog); magnesium:sodium antiporter activity (ortholog); INVOLVED IN cellular response to magnesium ion (ortholog); intracellular magnesium ion homeostasis (ortholog); magnesium ion transmembrane transport (ortholog); ASSOCIATED WITH Nephronophthisis-like Nephropathy 2 (ortholog); FOUND IN basolateral plasma membrane (ortholog); plasma membrane (ortholog); protein-containing complex (ortholog) 10 3987706 4007648 - 22301074;30032202 116911264 MODEL JAAIVD010000005;XM_032915170 XP_032771061 protein-coding 626166489 LOC116898601 40S ribosomal protein S23-like 4 182564820 182566395 + 22301074;30032202 116898601 MODEL JAAIVD010000003;XM_032899794 XP_032755685 protein-coding 626166494 LOC116895934 cyclin-dependent kinase 1-like 3 126791792 126892514 + 116895934 MODEL JAAIVD010000012 pseudo 626166495 Pcdh10 protocadherin 10 INVOLVED IN cell adhesion (ortholog); homophilic cell adhesion via plasma membrane adhesion molecules (ortholog); ASSOCIATED WITH autistic disorder (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynaptic membrane (ortholog) 3 108799679 108858856 - 22301074 116896898 MODEL JAAIVD010000012;XM_032898444;XM_032898445;XM_032898446 XP_032754335;XP_032754336;XP_032754337 protocadherin-10 protein-coding 626166510 LOC116905466 uncharacterized LOC116905466 7 127200032 127204572 + 116905466 MODEL JAAIVD010000026;XR_004388536;XR_004388537;XR_004388538 ncrna 626166520 Rab36 RAB36, member RAS oncogene family 18 12405802 12421556 - 22301074 116887309 MODEL JAAIVD010000013;XM_032888891;XM_032888892 XP_032744782;XP_032744783 ras-related protein Rab-36 protein-coding 626166539 LOC116911661 40S ribosomal protein S10-like 10 11382157 11382716 - 116911661 MODEL JAAIVD010000005 pseudo 626166540 LOC116894515 vomeronasal type-1 receptor 1-like 2 174700284 174701237 - 22301074;30032202 116894515 MODEL JAAIVD010000001;XM_032896216 XP_032752107 protein-coding 626166543 LOC116909880 ubiquitin-like protein FUBI 9 91274741 91275137 - 116909880 MODEL JAAIVD010000002 pseudo 626166544 Coxfa4l3 cytochrome c oxidase associated subunit FA4L3 INVOLVED IN response to bacterium (ortholog); FOUND IN mitochondrion (ortholog); nucleus (ortholog) 5 100732615 100736232 + 116901893 MODEL JAAIVD010000023;XM_032904101;XM_032904103 XP_032759992;XP_032759994 C5H15orf48 chromosome 5 C15orf48 homolog;normal mucosa of esophagus-specific gene 1 protein protein-coding 626166556 LOC116899848 U1 spliceosomal RNA 4 182465049 182465212 + 116899848 MODEL JAAIVD010000003;XR_004387844 snrna 626166559 LOC116913932 probable 28S rRNA (cytosine-C(5))-methyltransferase 12 36718237 36720141 + 116913932 MODEL JAAIVD010000007 pseudo 626166560 Phaf1 phagophore assembly factor 1 ENCODES a protein that exhibits glutamate receptor binding (ortholog); PDZ domain binding (ortholog); INVOLVED IN Golgi to plasma membrane protein transport (ortholog); FOUND IN dendrite (ortholog); phagophore assembly site (ortholog); synaptic vesicle membrane (ortholog) 17 24951411 24980072 + 30032202 116886045 MODEL JAAIVD010000011;XM_032887349 XP_032743240 C17H16orf70 UPF0183 protein C16orf70 homolog;chromosome 17 C16orf70 homolog;phagosome assembly factor 1 protein-coding 626166580 LOC116885068 small nucleolar RNA SNORA17 15 13255661 13255741 + 116885068 MODEL JAAIVD010000010 pseudo 626166581 LOC116894029 olfactory receptor 52Z1-like 2 102051354 102052316 - 22301074 116894029 MODEL JAAIVD010000001;XM_032895746 XP_032751637 protein-coding 626166584 Grxcr1 glutaredoxin and cysteine rich domain containing 1 INVOLVED IN auditory receptor cell stereocilium organization (ortholog); calcium ion transmembrane transport (ortholog); cell morphogenesis (ortholog); ASSOCIATED WITH autosomal recessive nonsyndromic deafness (ortholog); autosomal recessive nonsyndromic deafness 25 (ortholog); Deafness (ortholog); FOUND IN kinocilium (ortholog); stereocilium (ortholog) 11 25141949 25263957 + 30032202 116912377 MODEL JAAIVD010000006;XM_032916434 XP_032772325 glutaredoxin domain-containing cysteine-rich protein 1 protein-coding 626166592 LOC116888017 cyclin-D-binding Myb-like transcription factor 1 X 80292684 80294138 - 30032202 116888017 MODEL JAAIVD010000014;XM_032889431 XP_032745322 protein-coding 626166595 LOC116895258 late cornified envelope protein 1C-like 3 1285392 1285970 + 22301074 116895258 MODEL JAAIVD010000012;XM_032896577 XP_032752468 protein-coding 626166599 LOC116914778 heterogeneous nuclear ribonucleoprotein A3-like 13 19908479 19910371 - 116914778 MODEL JAAIVD010000008;XR_004389767 pseudo 626166602 LOC116904820 U6 spliceosomal RNA 6 22498092 22498193 + 116904820 MODEL JAAIVD010000024;XR_004388471 snrna 626166605 LOC116897410 U6 spliceosomal RNA 3 116279397 116279497 - 116897410 MODEL JAAIVD010000012 pseudo 626166606 Fbxw12 F-box and WD repeat domain containing 12 ASSOCIATED WITH Diabetic Nephropathies (ortholog) 8 100401706 100421514 - 22301074 116907026 MODEL JAAIVD010000027;XM_032909966;XM_032909967;XM_032909968;XM_032909969 XP_032765857;XP_032765858;XP_032765859;XP_032765860 F-box/WD repeat-containing protein 12 protein-coding 626166627 S100a3 S100 calcium binding protein A3 ASSOCIATED WITH prostate cancer (ortholog); FOUND IN cytosol (ortholog); Golgi apparatus (ortholog); plasma membrane (ortholog) 3 63014578 63055582 - 22301074;30032202 116896596 MODEL JAAIVD010000012;XM_032897839;XM_032897840;XM_032897841;XM_032897842;XM_032897843 XP_032753730;XP_032753731;XP_032753732;XP_032753733;XP_032753734 protein S100-A3 protein-coding 626166646 LOC116909095 olfactory receptor 1468-like 9 44480833 44481771 - 22301074;30032202 116909095 MODEL JAAIVD010000002;XM_032912566 XP_032768457 protein-coding 626166649 LOC116894982 small nucleolar RNA SNORA9 2 91482296 91482428 + 116894982 MODEL JAAIVD010000001;XR_004387173 snorna 626166652 Cdkl3 cyclin dependent kinase like 3 INVOLVED IN dendrite extension (ortholog); negative regulation of axon extension (ortholog); positive regulation of dendrite morphogenesis (ortholog); FOUND IN cytoplasm (ortholog); nucleus (ortholog) 9 34594027 34677927 + 22301074;30032202 116908788 MODEL JAAIVD010000002;XM_032912175;XM_032912176;XM_032912177;XM_032912178;XM_032912179;XM_032912180;XM_032912181;XR_004389026 XP_032768066;XP_032768067;XP_032768068;XP_032768069;XP_032768070;XP_032768071;XP_032768072 cyclin-dependent kinase-like 3 protein-coding 626166690 LOC116902493 U6 spliceosomal RNA 5 134658810 134658913 + 116902493 MODEL JAAIVD010000023;XR_004388108 snrna 626166693 Spem3 SPEM family member 3 9 49417667 49422564 - 30032202 116908597 MODEL JAAIVD010000002;XM_032911820 XP_032767711 uncharacterized protein SPEM3 protein-coding 626166699 Tal1 TAL bHLH transcription factor 1, erythroid differentiation factor ENCODES a protein that exhibits chromatin binding (ortholog); DNA binding (ortholog); DNA-binding transcription factor activity (ortholog); INVOLVED IN angiogenesis (ortholog); astrocyte fate commitment (ortholog); basophil differentiation (ortholog); ASSOCIATED WITH acute lymphoblastic leukemia (ortholog); lymphoid leukemia (ortholog); T-cell acute lymphoblastic leukemia (ortholog); FOUND IN chromatin (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 1 41511702 41519820 - 22301074;30032202 116898791 MODEL JAAIVD010000025;XM_032900141 XP_032756032 T-cell acute lymphocytic leukemia protein 1 protein-coding 626166706 Siah2 siah E3 ubiquitin protein ligase 2 ENCODES a protein that exhibits ubiquitin conjugating enzyme binding (ortholog); ubiquitin protein ligase activity (ortholog); ubiquitin-protein transferase activity (ortholog); INVOLVED IN canonical Wnt signaling pathway (ortholog); negative regulation of apoptotic process (ortholog); negative regulation of canonical Wnt signaling pathway (ortholog); PARTICIPATES IN estrogen signaling pathway; nuclear factor, erythroid 2 like 2 signaling pathway; ASSOCIATED WITH lens disease (ortholog); FOUND IN cytosol (ortholog); early endosome (ortholog); neuronal cell body (ortholog) 3 97185864 97202380 - 22301074;30032202 116896857 MODEL JAAIVD010000012;XM_032898365 XP_032754256 E3 ubiquitin-protein ligase SIAH2 protein-coding 626166712 Rab28 RAB28, member RAS oncogene family ENCODES a protein that exhibits G protein activity (ortholog); GDP binding (ortholog); GTP binding (ortholog); ASSOCIATED WITH basal cell carcinoma (ortholog); cone dystrophy (ortholog); cone-rod dystrophy (ortholog); FOUND IN ciliary basal body (ortholog); ciliary rootlet (ortholog) 11 63783888 63864520 + 22301074;30032202 116912897 MODEL JAAIVD010000006;XM_032917155;XM_032917156;XM_032917158 XP_032773046;XP_032773047;XP_032773049 ras-related protein Rab-28 protein-coding 626166729 Errfi1 ERBB receptor feedback inhibitor 1 ENCODES a protein that exhibits kinase binding (ortholog); protein kinase binding (ortholog); SH3 domain binding (ortholog); INVOLVED IN apoptotic process (ortholog); bile acid biosynthetic process (ortholog); cartilage development (ortholog); ASSOCIATED WITH Cardiomegaly (ortholog); Diabetic Nephropathies (ortholog); endometrial cancer (ortholog); FOUND IN cytoplasm (ortholog); cytosol (ortholog); plasma membrane (ortholog) 1 9886684 9901325 - 2780291;30032202 116892448 MODEL JAAIVD010000025;X07266;XM_032894154;XM_032894164;XM_032894172 CAA30252;XP_032750045;XP_032750055;XP_032750063 protein-coding 626166742 LOC116907635 olfactory receptor 958-like 8 82763642 82764574 - 22301074 116907635 MODEL JAAIVD010000027;XM_032910697 XP_032766588 protein-coding 626166745 LOC116885894 40S ribosomal protein S20-like 1 2885125 2885631 + 116885894 MODEL JAAIVD010000025 pseudo 626166746 LOC116888402 uncharacterized LOC116888402 X 65851911 65891495 + 116888402 MODEL JAAIVD010000014 pseudo 626166747 Ripor1 RHO family interacting cell polarization regulator 1 ENCODES a protein that exhibits 14-3-3 protein binding (ortholog); INVOLVED IN cellular response to chemokine (ortholog); cellular response to starvation (ortholog); establishment of Golgi localization (ortholog); FOUND IN cell leading edge (ortholog); cytoplasm (ortholog); cytosol (ortholog) 17 25337062 25353563 + 116886443 MODEL JAAIVD010000011;XM_032887935;XM_032887936;XM_032887937 XP_032743826;XP_032743827;XP_032743828 rho family-interacting cell polarization regulator 1 protein-coding 626166780 LOC116894362 sialic acid-binding Ig-like lectin 12 2 155739277 155747865 + 30032202 116894362 MODEL JAAIVD010000001;XM_032896063;XM_032896065 XP_032751954;XP_032751956 protein-coding 626166793 Romo1 reactive oxygen species modulator 1 ENCODES a protein that exhibits monoatomic cation transmembrane transporter activity (ortholog); INVOLVED IN antimicrobial humoral immune response mediated by antimicrobial peptide (ortholog); cellular response to reactive oxygen species (ortholog); monoatomic cation transmembrane transport (ortholog); PARTICIPATES IN presequence pathway of mitochondrial protein import; ASSOCIATED WITH ureteral obstruction (ortholog); FOUND IN mitochondrial inner membrane (ortholog); mitochondrion (ortholog); TIM23 mitochondrial import inner membrane translocase complex (ortholog) 5 135503364 135504977 + 30032202 116902197 MODEL JAAIVD010000023;XM_032904563 XP_032760454 protein-coding 626166800 Nod1 nucleotide binding oligomerization domain containing 1 ENCODES a protein that exhibits CARD domain binding (ortholog); identical protein binding (ortholog); pattern recognition receptor activity (ortholog); INVOLVED IN cellular response to muramyl dipeptide (ortholog); defense response to bacterium (ortholog); defense response to Gram-negative bacterium (ortholog); ASSOCIATED WITH asthma (ortholog); bacterial pneumonia (ortholog); Cardiac Fibrosis (ortholog); FOUND IN basolateral plasma membrane (ortholog); cytoplasm (ortholog); cytosol (ortholog) 6 86096462 86144017 + 22301074 116903762 MODEL JAAIVD010000024;XM_032906452;XM_032906453 XP_032762343;XP_032762344 nucleotide-binding oligomerization domain-containing protein 1 protein-coding 626166820 Il17re interleukin 17 receptor E 6 33064781 33077507 - 30032202 116903411 MODEL JAAIVD010000024;XM_032905928 XP_032761819 interleukin-17 receptor E protein-coding 626166839 Islr immunoglobulin superfamily containing leucine rich repeat 8 52033737 52035697 - 22301074 116906738 MODEL JAAIVD010000027;XM_032909560 XP_032765451 immunoglobulin superfamily containing leucine-rich repeat protein protein-coding 626166843 Pp2d1 protein phosphatase 2C like domain containing 1 4 90539374 90550342 - 30032202 116898423 MODEL JAAIVD010000003;XM_032899703 XP_032755594 protein phosphatase 2C-like domain-containing protein 1 protein-coding 626166848 LOC116884940 importin-5-like 15 22905396 22907361 + 30032202 116884940 MODEL JAAIVD010000010;XM_032886150 XP_032742041 protein-coding 626166853 LOC116911358 catenin beta-1-like 10 88993128 88994991 + 22301074;30032202 116911358 MODEL JAAIVD010000005;XM_032915278;XM_032915279;XM_032915280 XP_032771169;XP_032771170;XP_032771171 protein-coding 626166863 Gripap1 GRIP1 associated protein 1 ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (ortholog); identical protein binding (ortholog); ionotropic glutamate receptor binding (ortholog); INVOLVED IN negative regulation of protein localization (ortholog); negative regulation of receptor clustering (ortholog); regulation of neurotransmitter receptor transport, endosome to postsynaptic membrane (ortholog); ASSOCIATED WITH epilepsy (ortholog); Neurodevelopmental Disorders (ortholog); FOUND IN cytosol (ortholog); dendrite (ortholog); extrinsic component of postsynaptic early endosome membrane (ortholog) X 14313101 14342097 - 30032202 116888446 MODEL JAAIVD010000014;XM_032889721;XM_032889723;XM_032889724 XP_032745612;XP_032745614;XP_032745615 GRIP1-associated protein 1 protein-coding 626166895 Trnak-uuu transfer RNA lysine (anticodon UUU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 10 2809105 2809177 + 116911902 MODEL JAAIVD010000005 trna 626166896 Noc2l NOC2 like nucleolar associated transcriptional repressor ENCODES a protein that exhibits chromatin binding (ortholog); DNA-binding transcription factor binding (ortholog); histone binding (ortholog); INVOLVED IN cellular response to UV (ortholog); negative regulation of B cell apoptotic process (ortholog); negative regulation of intrinsic apoptotic signaling pathway (ortholog); FOUND IN chromosome (ortholog); cytosol (ortholog); nucleolus (ortholog) 1 4421682 4433631 - 30032202 116891445 MODEL JAAIVD010000025;XM_032892515 XP_032748406 nucleolar complex protein 2 homolog protein-coding 626166919 LOC116907062 olfactory receptor 7G2-like 8 15173928 15174894 - 22301074;30032202 116907062 MODEL JAAIVD010000027;XM_032910018 XP_032765909 protein-coding 626166923 LOC116883812 40S ribosomal protein S23-like 14 12115000 12115495 - 116883812 MODEL JAAIVD010000009 pseudo 626166924 Polr2d RNA polymerase II subunit D INVOLVED IN transcription by RNA polymerase II (ortholog); PARTICIPATES IN RNA polymerase II transcription pathway; FOUND IN cytosol (ortholog); nuclear speck (ortholog); nucleoplasm (ortholog) 15 12448413 12454921 - 22301074;30032202 116884752 MODEL JAAIVD010000010;XM_032885969 XP_032741860 DNA-directed RNA polymerase II subunit RPB4 protein-coding 626166932 Gja10 gap junction protein alpha 10 ENCODES a protein that exhibits gap junction channel activity (ortholog); INVOLVED IN detection of light stimulus involved in visual perception (ortholog); gamete generation (ortholog); response to light stimulus (ortholog); FOUND IN gap junction (ortholog) 1 110424881 110426401 + 22301074;30032202 116888973 MODEL JAAIVD010000025;XM_032890199 XP_032746090 gap junction alpha-10 protein protein-coding 626166935 Gzf1 GDNF inducible zinc finger protein 1 ENCODES a protein that exhibits DNA-binding transcription repressor activity, RNA polymerase II-specific (ortholog); RNA polymerase II cis-regulatory region sequence-specific DNA binding (ortholog); sequence-specific DNA binding (ortholog); INVOLVED IN branching involved in ureteric bud morphogenesis (ortholog); negative regulation of DNA-templated transcription (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH genetic disease (ortholog); JOINT LAXITY, SHORT STATURE, AND MYOPIA (ortholog); Larsen syndrome (ortholog); FOUND IN nucleolus (ortholog); nucleoplasm (ortholog); nucleus (ortholog) 5 128215061 128227307 + 22301074;30032202 116902076 MODEL JAAIVD010000023;XM_032904366;XM_032904367 XP_032760257;XP_032760258 GDNF-inducible zinc finger protein 1 protein-coding 626166948 Trnat-agu transfer RNA threonine (anticodon AGU) This record represents a tRNA model predicted using tRNAscan-SE (Lowe, T.M. and Eddy, S.R. 1997. Nucleic Acids Res. 25:955-964, PubMed 9023104). 9 48629906 48629979 + 116910798 MODEL JAAIVD010000002 trna 626166949 LOC116897337 ribosome-recycling factor, mitochondrial-like 3 214950704 214951315 - 30032202 116897337 MODEL JAAIVD010000012;XM_032899092 XP_032754983 protein-coding 626166954 LOC116885490 zinc finger protein 345-like 16 14539252 14568771 - 30032202 116885490 MODEL JAAIVD010000004;XM_032886781 XP_032742672 protein-coding 626166963 LOC116888472 uncharacterized LOC116888472 X 109824834 109840593 + 116888472 MODEL JAAIVD010000014;XR_004386314 ncrna 626166969 LOC116895701 transcriptional adapter 3-like 3 210943182 210943660 - 30032202 116895701 MODEL JAAIVD010000012;XM_032896898 XP_032752789 protein-coding 626166973 LOC116898277 olfactory receptor 12-like 4 164555909 164556877 + 22301074;30032202 116898277 MODEL JAAIVD010000003;XM_032899629 XP_032755520 protein-coding 626166976 LOC116910405 ubiquitin-conjugating enzyme E2 C-like 9 77240353 77240959 - 116910405 MODEL JAAIVD010000002 pseudo 626166977 LOC116907332 rho GTPase-activating protein 33-like 8 31767318 31772010 + 116907332 MODEL JAAIVD010000027 pseudo